BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019650
(337 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 104/311 (33%), Positives = 169/311 (54%), Gaps = 25/311 (8%)
Query: 25 QFRRRRHHFPTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTS 84
Q R+R F T ++++ D +K++ LG GNGG+V+KV H+ S + A K+++
Sbjct: 4 QQRKRLEAFLTQKQKVGELKD-DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEI 62
Query: 85 STIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLS 144
IR+Q E ++L +S +IV + FY+ +GEI MEHM+ GSL L+ ++
Sbjct: 63 KPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIP 121
Query: 145 EDVISGVAYRVLKGLQYL-HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXX 203
E ++ V+ V+KGL YL +I+H D+KPSN+L+N +GE+K+ DFGVS
Sbjct: 122 EQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS---------- 171
Query: 204 XXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
I A + +GT +YMSPER+ G Y D+WS+G+ ++E VG YP
Sbjct: 172 ------GQLIDSMANSFVGTRSYMSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGRYP 221
Query: 264 LIGFGEKPDLMALICAICFGERLEMPETA-SPEFRRFVRSCLEKDWRKRGTVEELLAYPF 322
+ + L+ I ++P S EF+ FV CL K+ +R +++L+ + F
Sbjct: 222 IGSGSGSMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAF 281
Query: 323 VTKRSSSSNIE 333
+ KRS + ++
Sbjct: 282 I-KRSDAEEVD 291
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 163 bits (413), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 101/295 (34%), Positives = 161/295 (54%), Gaps = 30/295 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
D +K++ LG GNGG+V+KV H+ S + A K+++ IR+Q E ++L +S +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL-HGM 165
IV + FY+ +GEI MEHM+ GSL L+ ++ E ++ V+ V+KGL YL
Sbjct: 66 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+I+H D+KPSN+L+N +GE+K+ DFGVS I A + +GT +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVS----------------GQLIDSMANSFVGTRS 168
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPD------LMALICA 279
YMSPER+ G Y D+WS+G+ ++E VG YP+ K D + L+
Sbjct: 169 YMSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMAIFELLDY 224
Query: 280 ICFGERLEMPETA-SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIE 333
I ++P S EF+ FV CL K+ +R +++L+ + F+ KRS + ++
Sbjct: 225 IVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI-KRSDAEEVD 278
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 162 bits (411), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/291 (34%), Positives = 160/291 (54%), Gaps = 32/291 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
D +K++ LG GNGG+V+KV H+ S + A K+++ IR+Q E ++L +S +
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL-HGM 165
IV + FY+ +GEI MEHM+ GSL L+ ++ E ++ V+ V+KGL YL
Sbjct: 69 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 127
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+I+H D+KPSN+L+N +GE+K+ DFGVS I E A +GT +
Sbjct: 128 KIMHRDVKPSNILVNSRGEIKLCDFGVS----------------GQLIDEMANEFVGTRS 171
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL--MALICAICFG 283
YMSPER+ G Y D+WS+G+ ++E VG YP +P + L+ I
Sbjct: 172 YMSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGRYP------RPPMAIFELLDYIVNE 221
Query: 284 ERLEMPETA-SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIE 333
++P S EF+ FV CL K+ +R +++L+ + F+ KRS + ++
Sbjct: 222 PPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI-KRSDAEEVD 271
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 155 bits (392), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 173/351 (49%), Gaps = 63/351 (17%)
Query: 23 NHQFRRRRHHFPTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNT 82
+ Q R+R F T ++++ D +K++ LG GNGG+V+KV H+ S + A K+++
Sbjct: 45 DEQQRKRLEAFLTQKQKVGELKD-DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL 103
Query: 83 TSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK 142
IR+Q E ++L +S +IV + FY+ +GEI MEHM+ GSL L+ +
Sbjct: 104 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGR 162
Query: 143 LSEDVISGVAYRVLKGLQYL-HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRX 201
+ E ++ V+ V+KGL YL +I+H D+KPSN+L+N +GE+K+ DFGVS
Sbjct: 163 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-------- 214
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGH 261
I A + +GT +YMSPER+ G Y D+WS+G+ ++E VG
Sbjct: 215 --------GQLIDSMANSFVGTRSYMSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGR 262
Query: 262 YPL------------------------------------IGFGEKPDL--MALICAICFG 283
YP+ G +P + L+ I
Sbjct: 263 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNE 322
Query: 284 ERLEMPETA-SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIE 333
++P S EF+ FV CL K+ +R +++L+ + F+ KRS + ++
Sbjct: 323 PPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI-KRSDAEEVD 372
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 155 bits (391), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 106/351 (30%), Positives = 173/351 (49%), Gaps = 63/351 (17%)
Query: 23 NHQFRRRRHHFPTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNT 82
+ Q R+R F T ++++ D +K++ LG GNGG+V+KV H+ S + A K+++
Sbjct: 10 DEQQRKRLEAFLTQKQKVGELKD-DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHL 68
Query: 83 TSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK 142
IR+Q E ++L +S +IV + FY+ +GEI MEHM+ GSL L+ +
Sbjct: 69 EIKPAIRNQIIRELQVLHECNSPYIVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGR 127
Query: 143 LSEDVISGVAYRVLKGLQYL-HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRX 201
+ E ++ V+ V+KGL YL +I+H D+KPSN+L+N +GE+K+ DFGVS
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVS-------- 179
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGH 261
I A + +GT +YMSPER+ G Y D+WS+G+ ++E VG
Sbjct: 180 --------GQLIDSMANSFVGTRSYMSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGR 227
Query: 262 YPL------------------------------------IGFGEKPDL--MALICAICFG 283
YP+ G +P + L+ I
Sbjct: 228 YPIPPPDAKELELMFGCQVEGDAAETPPRPRTPGRPLNKFGMDSRPPMAIFELLDYIVNE 287
Query: 284 ERLEMPETA-SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIE 333
++P S EF+ FV CL K+ +R +++L+ + F+ KRS + ++
Sbjct: 288 PPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVHAFI-KRSDAEEVD 337
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 62/326 (19%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
D +K++ LG GNGG+V+KV H+ S + A K+++ IR+Q E ++L +S +I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL-HGMQ 166
V + FY+ +GEI MEHM+ GSL L+ ++ E ++ V+ V+KGL YL +
Sbjct: 67 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
I+H D+KPSN+L+N +GE+K+ DFGVS I A + +GT +Y
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS----------------GQLIDSMANSFVGTRSY 169
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL---------------------- 264
MSPER+ G Y D+WS+G+ ++E VG YP+
Sbjct: 170 MSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
Query: 265 --------------IGFGEKPDL--MALICAICFGERLEMPETA-SPEFRRFVRSCLEKD 307
G +P + L+ I ++P S EF+ FV CL K+
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 308 WRKRGTVEELLAYPFVTKRSSSSNIE 333
+R +++L+ + F+ KRS + ++
Sbjct: 286 PAERADLKQLMVHAFI-KRSDAEEVD 310
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 151 bits (381), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 101/326 (30%), Positives = 162/326 (49%), Gaps = 62/326 (19%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
D +K++ LG GNGG+V+KV H+ S + A K+++ IR+Q E ++L +S +I
Sbjct: 7 DFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYI 66
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL-HGMQ 166
V + FY+ +GEI MEHM+ GSL L+ ++ E ++ V+ V+KGL YL +
Sbjct: 67 VGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKHK 125
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
I+H D+KPSN+L+N +GE+K+ DFGVS I A + +GT +Y
Sbjct: 126 IMHRDVKPSNILVNSRGEIKLCDFGVS----------------GQLIDSMANSFVGTRSY 169
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL---------------------- 264
MSPER+ G Y D+WS+G+ ++E VG YP+
Sbjct: 170 MSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225
Query: 265 --------------IGFGEKPDL--MALICAICFGERLEMPETA-SPEFRRFVRSCLEKD 307
G +P + L+ I ++P S EF+ FV CL K+
Sbjct: 226 TPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKN 285
Query: 308 WRKRGTVEELLAYPFVTKRSSSSNIE 333
+R +++L+ + F+ KRS + ++
Sbjct: 286 PAERADLKQLMVHAFI-KRSDAEEVD 310
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 162/327 (49%), Gaps = 62/327 (18%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
D +K++ LG GNGG+V+KV H+ S + A K+++ IR+Q E ++L +S +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL-HGM 165
IV + FY+ +GEI MEHM+ GSL L+ ++ E ++ V+ V+KGL YL
Sbjct: 66 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+I+H D+KPSN+L+N +GE+K+ DFGVS I A + +GT +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVS----------------GQLIDSMANSFVGTRS 168
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL--------------------- 264
YMSPER+ G Y D+WS+G+ ++E VG YP+
Sbjct: 169 YMSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 224
Query: 265 ---------------IGFGEKPDL--MALICAICFGERLEMPETA-SPEFRRFVRSCLEK 306
G +P + L+ I ++P S EF+ FV CL K
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 284
Query: 307 DWRKRGTVEELLAYPFVTKRSSSSNIE 333
+ +R +++L+ + F+ KRS + ++
Sbjct: 285 NPAERADLKQLMVHAFI-KRSDAEEVD 310
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 150 bits (380), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 101/327 (30%), Positives = 162/327 (49%), Gaps = 62/327 (18%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
D +K++ LG GNGG+V+KV H+ S + A K+++ IR+Q E ++L +S +
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL-HGM 165
IV + FY+ +GEI MEHM+ GSL L+ ++ E ++ V+ V+KGL YL
Sbjct: 66 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVSIAVIKGLTYLREKH 124
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+I+H D+KPSN+L+N +GE+K+ DFGVS I A + +GT +
Sbjct: 125 KIMHRDVKPSNILVNSRGEIKLCDFGVS----------------GQLIDSMANSFVGTRS 168
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL--------------------- 264
YMSPER+ G Y D+WS+G+ ++E VG YP+
Sbjct: 169 YMSPERLQ----GTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAA 224
Query: 265 ---------------IGFGEKPDL--MALICAICFGERLEMPETA-SPEFRRFVRSCLEK 306
G +P + L+ I ++P S EF+ FV CL K
Sbjct: 225 ETPPRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIK 284
Query: 307 DWRKRGTVEELLAYPFVTKRSSSSNIE 333
+ +R +++L+ + F+ KRS + ++
Sbjct: 285 NPAERADLKQLMVHAFI-KRSDAEEVD 310
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 149 bits (377), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 101/331 (30%), Positives = 162/331 (48%), Gaps = 66/331 (19%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
D ++++ LG GNGG+V KV+H+ S I A K+++ IR+Q E ++L +S +
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL-HGM 165
IV + FY+ +GEI MEHM+ GSL L+ K++ E+++ V+ VL+GL YL
Sbjct: 76 IVGFYGAFYS-DGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRGLAYLREKH 134
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
QI+H D+KPSN+L+N +GE+K+ DFGVS I A + +GT +
Sbjct: 135 QIMHRDVKPSNILVNSRGEIKLCDFGVS----------------GQLIDSMANSFVGTRS 178
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI-------------------- 265
YM+PER+ G Y D+WS+G+ ++E VG YP+
Sbjct: 179 YMAPERLQ----GTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKELEAIFGRPVVDGEE 234
Query: 266 --------------------GFGEKPDL--MALICAICFGERLEMPETA-SPEFRRFVRS 302
G +P + L+ I ++P +P+F+ FV
Sbjct: 235 GEPHSISPRPRPPGRPVSGHGMDSRPAMAIFELLDYIVNEPPPKLPNGVFTPDFQEFVNK 294
Query: 303 CLEKDWRKRGTVEELLAYPFVTKRSSSSNIE 333
CL K+ +R ++ L + F+ KRS ++
Sbjct: 295 CLIKNPAERADLKMLTNHTFI-KRSEVEEVD 324
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 127 bits (319), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 134/286 (46%), Gaps = 25/286 (8%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L LG G+ G VYK H+++ I A+K + S + E I+++ DS +VK +
Sbjct: 34 LEKLGEGSYGSVYKAIHKETGQIVAIKQVPVESDL---QEIIKEISIMQQCDSPHVVKYY 90
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKK-LSEDVISGVAYRVLKGLQYLHGMQIIHG 170
++ ++ VME+ GS+ D +R+R K L+ED I+ + LKGL+YLH M+ IH
Sbjct: 91 GSYFK-NTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEYLHFMRKIHR 149
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
DIK N+L+N +G K+ADFGV+ + + +GT +M+PE
Sbjct: 150 DIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRN--------------XVIGTPFWMAPE 195
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ Y D+WSLG+ +E G P P + PE
Sbjct: 196 VIQE----IGYNCVADIWSLGITAIEMAEGKPPYADI--HPMRAIFMIPTNPPPTFRKPE 249
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
S F FV+ CL K +R T +LL +PFV S + LI
Sbjct: 250 LWSDNFTDFVKQCLVKSPEQRATATQLLQHPFVRSAKGVSILRDLI 295
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 124 bits (310), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 142/284 (50%), Gaps = 25/284 (8%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI-LKRLDSQ 105
DL+ + LG G G+V K+RH S I A+K + T ++ + + + +I ++ +D
Sbjct: 51 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 110
Query: 106 FIVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRK--KLSEDVISGVAYRVLKGLQYL 162
F V + + EG++ ME M+ F + K + ED++ +A ++K L++L
Sbjct: 111 FTVTFYGALFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 169
Query: 163 HG-MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H + +IH D+KPSN+LIN G+VK+ DFG+S + ++ A
Sbjct: 170 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDSV---------------AKTIDA 214
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
G YM+PER++ E Y D+WSLG+ ++E + +P +G + +
Sbjct: 215 GCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP---FQQLKQVV 271
Query: 282 FGERLEMP-ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
++P + S EF F CL+K+ ++R T EL+ +PF T
Sbjct: 272 EEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFT 315
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 122 bits (306), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 144/289 (49%), Gaps = 27/289 (9%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI-LKRLDSQ 105
DL+ + LG G G+V K+RH S I A+K + T ++ + + + +I ++ +D
Sbjct: 7 DDLEPIMELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCP 66
Query: 106 FIVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRK--KLSEDVISGVAYRVLKGLQYL 162
F V + + EG++ ME M+ F + K + ED++ +A ++K L++L
Sbjct: 67 FTVTFYGALFR-EGDVWICMELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 125
Query: 163 HG-MQIIHGDIKPSNLLINGKGEVKIADFGVS-RIVEETRXXXXXXXXXXXXIGEAAIAC 220
H + +IH D+KPSN+LIN G+VK+ DFG+S +V++ A
Sbjct: 126 HSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDV----------------AKDID 169
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
G YM+PER++ E Y D+WSLG+ ++E + +P +G + +
Sbjct: 170 AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDSWGTP---FQQLKQV 226
Query: 281 CFGERLEMP-ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
++P + S EF F CL+K+ ++R T EL+ +PF T S
Sbjct: 227 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELMQHPFFTLHES 275
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 149/290 (51%), Gaps = 34/290 (11%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI-LKRLDS 104
I+DL+ L +G G G V+K+R +K+ + A+K + + + + + ++ LK D
Sbjct: 24 INDLENLGEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDC 83
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK--LSEDVISGVAYRVLKGLQYL 162
+IV+C F T ++ ME M G+ + L+ R + + E ++ + ++K L YL
Sbjct: 84 PYIVQCFGTFIT-NTDVFIAMELM--GTCAEKLKKRMQGPIPERILGKMTVAIVKALYYL 140
Query: 163 ---HGMQIIHGDIKPSNLLINGKGEVKIADFGVS-RIVEETRXXXXXXXXXXXXIGEAAI 218
HG +IH D+KPSN+L++ +G++K+ DFG+S R+V++ +A
Sbjct: 141 KEKHG--VIHRDVKPSNILLDERGQIKLCDFGISGRLVDD----------------KAKD 182
Query: 219 ACMGTCAYMSPERVD-SERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
G AYM+PER+D + DY DVWSLG+ ++E G +P K D L
Sbjct: 183 RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNC--KTDFEVLT 240
Query: 278 CAICFGERLEMPETA--SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ E +P S +F+ FV+ CL KD RKR +LL + F+ +
Sbjct: 241 -KVLQEEPPLLPGHMGFSGDFQSFVKDCLTKDHRKRPKYNKLLEHSFIKR 289
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 120 bits (300), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 28/284 (9%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
KL +G G+ G VYK + + A+K+++ + E +L + DS +I +
Sbjct: 23 KLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRY 82
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
Y ++ +ME++ GS D L+ L E I+ + +LKGL YLH + IH
Sbjct: 83 FGS-YLKSTKLWIIMEYLGGGSALDLLKP-GPLEETYIATILREILKGLDYLHSERKIHR 140
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
DIK +N+L++ +G+VK+ADFGV+ + +T+ +GT +M+PE
Sbjct: 141 DIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN--------------XFVGTPFWMAPE 186
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL--MALICAICFGERLEM 288
+ Y F D+WSLG+ +E G P DL M ++ I +
Sbjct: 187 VIKQSA----YDFKADIWSLGITAIELAKGEPP------NSDLHPMRVLFLIPKNSPPTL 236
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNI 332
S F+ FV +CL KD R R T +ELL + F+T+ + ++
Sbjct: 237 EGQHSKPFKEFVEACLNKDPRFRPTAKELLKHKFITRYTKKTSF 280
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 114 bits (285), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 138/293 (47%), Gaps = 32/293 (10%)
Query: 45 NISD----LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILK 100
NI+D KL +G G+ G V+K ++ + A+K+++ + E +L
Sbjct: 17 NIADPEELFTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLS 76
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQ 160
+ DS ++ K + Y ++ +ME++ GS D LR E I+ + +LKGL
Sbjct: 77 QCDSSYVTKYYGS-YLKGSKLWIIMEYLGGGSALDLLRA-GPFDEFQIATMLKEILKGLD 134
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YLH + IH DIK +N+L++ +G+VK+ADFGV+ + +T+
Sbjct: 135 YLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRN--------------TF 180
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL--MALIC 278
+GT +M+PE + Y D+WSLG+ +E G P D+ M ++
Sbjct: 181 VGTPFWMAPEVIQQSA----YDSKADIWSLGITAIELAKGEPP------NSDMHPMRVLF 230
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
I + + F+ F+ +CL KD R T +ELL + F+ K S ++
Sbjct: 231 LIPKNNPPTLVGDFTKSFKEFIDACLNKDPSFRPTAKELLKHKFIVKNSKKTS 283
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 114 bits (284), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 84/299 (28%), Positives = 138/299 (46%), Gaps = 39/299 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSST-----IIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K + S + R + E IL+++ I+
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIIT 79
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y ++ ++E + G LFD L ++ LSE+ + ++L G+ YLH +I H
Sbjct: 80 LHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E+ G GT
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---------------GVEFKNIFGTPE 183
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A I A+ +
Sbjct: 184 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITAVSYDFD 238
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT---------KRSSSSNIEGL 335
E S + F+R L K+ RKR T++E L +P++T +R S N+E
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDTQQAMVRRESVVNLENF 297
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 39/299 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSST-----IIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K + S + R + E IL+++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y ++ ++E + G LFD L ++ LSE+ + ++L G+ YLH +I H
Sbjct: 80 LHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E+ G GT
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---------------GVEFKNIFGTPE 183
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A I A+ +
Sbjct: 184 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITAVSYDFD 238
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT---------KRSSSSNIEGL 335
E S + F+R L K+ RKR T++E L +P++T +R S N+E
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 113 bits (283), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 138/299 (46%), Gaps = 39/299 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSST-----IIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K + S + R + E IL+++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y ++ ++E + G LFD L ++ LSE+ + ++L G+ YLH +I H
Sbjct: 80 LHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E+ G GT
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---------------GVEFKNIFGTPE 183
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A I A+ +
Sbjct: 184 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITAVSYDFD 238
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT---------KRSSSSNIEGL 335
E S + F+R L K+ RKR T++E L +P++T +R S N+E
Sbjct: 239 EEFFSQTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 142/297 (47%), Gaps = 39/297 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT A
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPA 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV---------TKRSSSSNIE 333
E S + F+R L KD +KR T+++ L +P++ ++++S+ N+E
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNME 294
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 135/289 (46%), Gaps = 35/289 (12%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL-DSQF 106
DLK L +G G G V K+ H+ S I A+K + +T + Q + +++ R D +
Sbjct: 23 DLKDLGEIGRGAYGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPY 82
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLR------VRKKLSEDVISGVAYRVLKGLQ 160
IV+ + + EG+ ME M + FD + + E+++ + +K L
Sbjct: 83 IVQFYGALFR-EGDCWICMELM--STSFDKFYKYVYSVLDDVIPEEILGKITLATVKALN 139
Query: 161 YL-HGMQIIHGDIKPSNLLINGKGEVKIADFGVS-RIVEETRXXXXXXXXXXXXIGEAAI 218
+L ++IIH DIKPSN+L++ G +K+ DFG+S ++V+ A
Sbjct: 140 HLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSI----------------AKT 183
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
G YM+PER+D Y DVWSLG+ + E G +P + D + +
Sbjct: 184 RDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKWNSVFDQLTQVV 243
Query: 279 AICFGERLEMPETA----SPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
G+ ++ + SP F FV CL KD KR +ELL +PF+
Sbjct: 244 K---GDPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELLKHPFI 289
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 113 bits (282), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 80/289 (27%), Positives = 136/289 (47%), Gaps = 27/289 (9%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR-LDSQ 105
DL+ + LG G G+V K RH S I A+K + T ++ + + + +I R +D
Sbjct: 34 DDLEPIXELGRGAYGVVEKXRHVPSGQIXAVKRIRATVNSQEQKRLLXDLDISXRTVDCP 93
Query: 106 FIVKCHAVFYTIEGE--ICFVMEHMERGSLFDSLRVR-KKLSEDVISGVAYRVLKGLQYL 162
F V + + EG+ IC + + + + + + ED++ +A ++K L++L
Sbjct: 94 FTVTFYGALFR-EGDVWICXELXDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHL 152
Query: 163 HG-MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H + +IH D+KPSN+LIN G+VK DFG+S + + + A
Sbjct: 153 HSKLSVIHRDVKPSNVLINALGQVKXCDFGISGYL----------------VDDVAKDID 196
Query: 222 GTC-AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
C Y +PER++ E Y D+WSLG+ +E + +P +G + +
Sbjct: 197 AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFPYDSWGTP---FQQLKQV 253
Query: 281 CFGERLEMP-ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
++P + S EF F CL+K+ ++R T EL +PF T S
Sbjct: 254 VEEPSPQLPADKFSAEFVDFTSQCLKKNSKERPTYPELXQHPFFTLHES 302
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/277 (32%), Positives = 133/277 (48%), Gaps = 22/277 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G VYK ++++++ + A KV++T S + E +IL D IVK F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAF 103
Query: 115 YTIEGEICFVMEHMERGSLFDS--LRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y E + ++E G++ D+ L + + L+E I V + L L YLH +IIH D+
Sbjct: 104 Y-YENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K N+L G++K+ADFGVS + TR + +GT +M+PE V
Sbjct: 162 KAGNILFTLDGDIKLADFGVS--AKNTRTIQRRD------------SFIGTPYWMAPEVV 207
Query: 233 DSERWGG-DYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
E Y + DVWSLG+ ++E P P + L A L P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN--PMRVLLKIAKSEPPTLAQPSR 265
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
S F+ F++ CLEK+ R T +LL +PFVT S+
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 112 bits (281), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 95/285 (33%), Positives = 127/285 (44%), Gaps = 26/285 (9%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEIL-KRLDSQFIVKCHA 112
VLG G GIVY R + A+K + S Q HE L K L + IV+
Sbjct: 29 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY--SQPLHEEIALHKHLKHKNIVQYLG 86
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVR---KKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
F + G I ME + GSL LR + K +E I ++L+GL+YLH QI+H
Sbjct: 87 SF-SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 145
Query: 170 GDIKPSNLLING-KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
DIK N+LIN G +KI+DFG S+ + I GT YM+
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRL--------------AGINPCTETFTGTLQYMA 191
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEM 288
PE +D G YG A D+WSLG ++E G P GE A+ F E+
Sbjct: 192 PEIIDKGPRG--YGKAADIWSLGCTIIEMATGKPPFYELGEP--QAAMFKVGMFKVHPEI 247
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIE 333
PE+ S E + F+ C E D KR +LL F+ S +
Sbjct: 248 PESMSAEAKAFILKCFEPDPDKRACANDLLVDEFLKVSSKKKKTQ 292
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 134/277 (48%), Gaps = 22/277 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G VYK ++++++ + A KV++T S + E +IL D IVK F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAF 103
Query: 115 YTIEGEICFVMEHMERGSLFDS--LRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y E + ++E G++ D+ L + + L+E I V + L L YLH +IIH D+
Sbjct: 104 Y-YENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K N+L G++K+ADFGVS + TR + +GT +M+PE V
Sbjct: 162 KAGNILFTLDGDIKLADFGVS--AKNTRXIQRRD------------SFIGTPYWMAPEVV 207
Query: 233 DSERWGG-DYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
E Y + DVWSLG+ ++E P P + L A L P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN--PMRVLLKIAKSEPPTLAQPSR 265
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
S F+ F++ CLEK+ R T +LL +PFVT S+
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 125/275 (45%), Gaps = 26/275 (9%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEIL-KRLDSQFIVKCHA 112
VLG G GIVY R + A+K + S Q HE L K L + IV+
Sbjct: 15 VLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRY--SQPLHEEIALHKHLKHKNIVQYLG 72
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVR---KKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
F + G I ME + GSL LR + K +E I ++L+GL+YLH QI+H
Sbjct: 73 SF-SENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVH 131
Query: 170 GDIKPSNLLING-KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
DIK N+LIN G +KI+DFG S+ + I GT YM+
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRL--------------AGINPCTETFTGTLQYMA 177
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEM 288
PE +D G YG A D+WSLG ++E G P GE A+ F E+
Sbjct: 178 PEIIDKGPRG--YGKAADIWSLGCTIIEMATGKPPFYELGEPQ--AAMFKVGMFKVHPEI 233
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
PE+ S E + F+ C E D KR +LL F+
Sbjct: 234 PESMSAEAKAFILKCFEPDPDKRACANDLLVDEFL 268
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 90/277 (32%), Positives = 133/277 (48%), Gaps = 22/277 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G VYK ++++++ + A KV++T S + E +IL D IVK F
Sbjct: 45 LGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAF 103
Query: 115 YTIEGEICFVMEHMERGSLFDS--LRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y E + ++E G++ D+ L + + L+E I V + L L YLH +IIH D+
Sbjct: 104 Y-YENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDL 161
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K N+L G++K+ADFGVS + TR +GT +M+PE V
Sbjct: 162 KAGNILFTLDGDIKLADFGVS--AKNTRXIQRRD------------XFIGTPYWMAPEVV 207
Query: 233 DSERWGG-DYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
E Y + DVWSLG+ ++E P P + L A L P
Sbjct: 208 MCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN--PMRVLLKIAKSEPPTLAQPSR 265
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
S F+ F++ CLEK+ R T +LL +PFVT S+
Sbjct: 266 WSSNFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 302
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 138/299 (46%), Gaps = 39/299 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSST-----IIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K + S + R + E IL+++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y ++ ++E + G LFD L ++ LSE+ + ++L G+ YLH +I H
Sbjct: 80 LHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E+ G GT
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---------------GVEFKNIFGTPE 183
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A I ++ +
Sbjct: 184 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITSVSYDFD 238
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT---------KRSSSSNIEGL 335
E S + F+R L K+ RKR T++E L +P++T +R S N+E
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/299 (27%), Positives = 138/299 (46%), Gaps = 39/299 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSST-----IIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K + S + R + E IL+++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y ++ ++E + G LFD L ++ LSE+ + ++L G+ YLH +I H
Sbjct: 80 LHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E+ G GT
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---------------GVEFKNIFGTPE 183
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A I ++ +
Sbjct: 184 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITSVSYDFD 238
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT---------KRSSSSNIEGL 335
E S + F+R L K+ RKR T++E L +P++T +R S N+E
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWITPVDNQQAMVRRESVVNLENF 297
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 111 bits (278), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 81/297 (27%), Positives = 141/297 (47%), Gaps = 39/297 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV---------TKRSSSSNIE 333
E S + F+R L KD +KR T+++ L +P++ ++++S+ N+E
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSRKASAVNME 294
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 78 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 182 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 236
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 279
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSS 330
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSS 330
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/285 (27%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSS 330
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQ 282
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 111 bits (277), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 18 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 77
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 78 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 136
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 137 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 182 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 236
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 237 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 279
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 80/271 (29%), Positives = 133/271 (49%), Gaps = 32/271 (11%)
Query: 47 SDLKKLTVLGHGNGGIVY---KVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRL 102
S + L VLG G+ G V+ KV S +YA+KVL + + R + E +IL +
Sbjct: 28 SHFELLKVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADV 87
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ F+VK H F T EG++ +++ + G LF L +E+ + + GL +L
Sbjct: 88 NHPFVVKLHYAFQT-EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALGLDHL 146
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSR--IVEETRXXXXXXXXXXXXIGEAAIAC 220
H + II+ D+KP N+L++ +G +K+ DFG+S+ I E + A +
Sbjct: 147 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKK----------------AYSF 190
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT YM+PE V+ + + + D WS GV++ E L G P G ++ + M LI
Sbjct: 191 CGTVEYMAPEVVNRQ----GHSHSADWWSYGVLMFEMLTGSLPFQG-KDRKETMTLILKA 245
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
G MP+ S E + +R+ +++ R
Sbjct: 246 KLG----MPQFLSTEAQSLLRALFKRNPANR 272
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 111 bits (277), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 132/279 (47%), Gaps = 30/279 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSST-----IIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K + S + R + E IL+++ ++
Sbjct: 20 LGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVIT 79
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y ++ ++E + G LFD L ++ LSE+ + ++L G+ YLH +I H
Sbjct: 80 LHDV-YENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYLHTKKIAH 138
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E+ G GT
Sbjct: 139 FDLKPENIMLLDKNIPIPHIKLIDFGLAHEIED---------------GVEFKNIFGTPE 183
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A I ++ +
Sbjct: 184 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANITSVSYDFD 238
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
E S + F+R L K+ RKR T++E L +P++T
Sbjct: 239 EEFFSHTSELAKDFIRKLLVKETRKRLTIQEALRHPWIT 277
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 110 bits (276), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 140/294 (47%), Gaps = 36/294 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS-QFIVKC 110
+ ++G+G G VYK RH K+ + A+KV++ T + E +LK+ + I
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDE--EEEIKQEINMLKKYSHHRNIATY 86
Query: 111 HAVFYT-----IEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLH 163
+ F ++ ++ VME GS+ D ++ K L E+ I+ + +L+GL +LH
Sbjct: 87 YGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREILRGLSHLH 146
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
++IH DIK N+L+ EVK+ DFGVS ++ T +G +GT
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRT-------------VGRRN-TFIGT 192
Query: 224 CAYMSPERVD-SERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
+M+PE + E Y F D+WSLG+ +E G PL M + A+
Sbjct: 193 PYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCD-------MHPMRALFL 245
Query: 283 GERLEMP----ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNI 332
R P + S +F+ F+ SCL K+ +R E+L+ +PF+ + + +
Sbjct: 246 IPRNPAPRLKSKKWSKKFQSFIESCLVKNHSQRPATEQLMKHPFIRDQPNERQV 299
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 88/274 (32%), Positives = 133/274 (48%), Gaps = 21/274 (7%)
Query: 58 GNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTI 117
G+ G VYK ++++++ + A KV++T S + E +IL D IVK FY
Sbjct: 21 GDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMV-EIDILASCDHPNIVKLLDAFY-Y 78
Query: 118 EGEICFVMEHMERGSLFDS--LRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPS 175
E + ++E G++ D+ L + + L+E I V + L L YLH +IIH D+K
Sbjct: 79 ENNLWILIEFCAGGAV-DAVMLELERPLTESQIQVVCKQTLDALNYLHDNKIIHRDLKAG 137
Query: 176 NLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSE 235
N+L G++K+ADFGVS + TR + +GT +M+PE V E
Sbjct: 138 NILFTLDGDIKLADFGVS--AKNTRTXIQRRD-----------SFIGTPYWMAPEVVMCE 184
Query: 236 RWGG-DYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASP 294
Y + DVWSLG+ ++E P P + L A L P S
Sbjct: 185 TSKDRPYDYKADVWSLGITLIEMAEIEPPHHELN--PMRVLLKIAKSEPPTLAQPSRWSS 242
Query: 295 EFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
F+ F++ CLEK+ R T +LL +PFVT S+
Sbjct: 243 NFKDFLKKCLEKNVDARWTTSQLLQHPFVTVDSN 276
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
++D L +LG G G V VR + + YA+K+L I + + AH E+ +L+
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQN 61
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + +E+ ++ L+Y
Sbjct: 62 TRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
LH +++ DIK NL+++ G +KI DFG+ + G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--------------EGISDGATMKTFC 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 167 GTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILM-- 219
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T SPE + + L+KD ++R
Sbjct: 220 --EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 133/281 (47%), Gaps = 30/281 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
E S + F+R L KD +KR T+++ L +P++ +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPK 278
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
++D L +LG G G V VR + + YA+K+L I + + AH E+ +L+
Sbjct: 6 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQN 64
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + +E+ ++ L+Y
Sbjct: 65 TRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 123
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
LH +++ DIK NL+++ G +KI DFG+ + G
Sbjct: 124 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--------------EGISDGATMKTFC 169
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 170 GTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILM-- 222
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T SPE + + L+KD ++R
Sbjct: 223 --EEIRFPRTLSPEAKSLLAGLLKKDPKQR 250
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 132/278 (47%), Gaps = 30/278 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
E S + F+R L KD +KR T+++ L +P++
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 134/283 (47%), Gaps = 30/283 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ ++E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILILELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 110 bits (274), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 132/267 (49%), Gaps = 32/267 (11%)
Query: 47 SDLKKLTVLGHGNGGIVY---KVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRL 102
S + L VLG G+ G V+ K+ + +YA+KVL + + R + E +IL +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ FIVK H F T EG++ +++ + G LF L +E+ + + L +L
Sbjct: 84 NHPFIVKLHYAFQT-EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSR--IVEETRXXXXXXXXXXXXIGEAAIAC 220
H + II+ D+KP N+L++ +G +K+ DFG+S+ I E + A +
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK----------------AYSF 186
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT YM+PE V+ R G + + D WS GV++ E L G P G K + ++ A
Sbjct: 187 CGTVEYMAPEVVN--RRG--HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA- 241
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKD 307
+L MP+ SPE + +R +++
Sbjct: 242 ----KLGMPQFLSPEAQSLLRMLFKRN 264
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 110 bits (274), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
++D L +LG G G V VR + + YA+K+L I + + AH E+ +L+
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQN 61
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + +E+ ++ L+Y
Sbjct: 62 TRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
LH +++ DIK NL+++ G +KI DFG+ + G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--------------EGISDGATMKXFC 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 167 GTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILM-- 219
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T SPE + + L+KD ++R
Sbjct: 220 --EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
++D L +LG G G V VR + + YA+K+L I + + AH E+ +L+
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQN 61
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + +E+ ++ L+Y
Sbjct: 62 TRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
LH +++ DIK NL+++ G +KI DFG+ + G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--------------EGISDGATMKXFC 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 167 GTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILM-- 219
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T SPE + + L+KD ++R
Sbjct: 220 --EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
++D L +LG G G V VR + + YA+K+L I + + AH E+ +L+
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQN 61
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + +E+ ++ L+Y
Sbjct: 62 TRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
LH +++ DIK NL+++ G +KI DFG+ + G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--------------EGISDGATMKTFC 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 167 GTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILM-- 219
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T SPE + + L+KD ++R
Sbjct: 220 --EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
++D L +LG G G V VR + + YA+K+L I + + AH E+ +L+
Sbjct: 3 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQN 61
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + +E+ ++ L+Y
Sbjct: 62 TRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 120
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
LH +++ DIK NL+++ G +KI DFG+ + G
Sbjct: 121 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--------------EGISDGATMKXFC 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 167 GTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILM-- 219
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T SPE + + L+KD ++R
Sbjct: 220 --EEIRFPRTLSPEAKSLLAGLLKKDPKQR 247
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 78/270 (28%), Positives = 121/270 (44%), Gaps = 28/270 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
++D L +LG G G V VR + + YA+K+L I + + AH E+ +L+
Sbjct: 8 TMNDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRK-EVIIAKDEVAHTVTESRVLQN 66
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + +E+ ++ L+Y
Sbjct: 67 TRHPFLTALKYAFQT-HDRLCFVMEYANGGELFFHLSRERVFTEERARFYGAEIVSALEY 125
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
LH +++ DIK NL+++ G +KI DFG+ + G
Sbjct: 126 LHSRDVVYRDIKLENLMLDKDGHIKITDFGLCK--------------EGISDGATMKXFC 171
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 172 GTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHERLFELILM-- 224
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T SPE + + L+KD ++R
Sbjct: 225 --EEIRFPRTLSPEAKSLLAGLLKKDPKQR 252
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 140/289 (48%), Gaps = 37/289 (12%)
Query: 47 SDLKKLTVLGHGNGGIVY---KVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRL 102
S + L VLG G+ G V+ K+ + +YA+KVL + + R + E +IL +
Sbjct: 24 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 83
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ FIVK H F T EG++ +++ + G LF L +E+ + + L +L
Sbjct: 84 NHPFIVKLHYAFQT-EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 142
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSR--IVEETRXXXXXXXXXXXXIGEAAIAC 220
H + II+ D+KP N+L++ +G +K+ DFG+S+ I E + A +
Sbjct: 143 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK----------------AYSF 186
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT YM+PE V+ R G + + D WS GV++ E L G P G K + ++ A
Sbjct: 187 CGTVEYMAPEVVN--RRG--HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA- 241
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKR-----GTVEELLAYPFVT 324
+L MP+ SPE + +R +++ R VEE+ + F +
Sbjct: 242 ----KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 286
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 84/289 (29%), Positives = 140/289 (48%), Gaps = 37/289 (12%)
Query: 47 SDLKKLTVLGHGNGGIVY---KVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRL 102
S + L VLG G+ G V+ K+ + +YA+KVL + + R + E +IL +
Sbjct: 25 SQFELLKVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEV 84
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ FIVK H F T EG++ +++ + G LF L +E+ + + L +L
Sbjct: 85 NHPFIVKLHYAFQT-EGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYLAELALALDHL 143
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSR--IVEETRXXXXXXXXXXXXIGEAAIAC 220
H + II+ D+KP N+L++ +G +K+ DFG+S+ I E + A +
Sbjct: 144 HSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKK----------------AYSF 187
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT YM+PE V+ R G + + D WS GV++ E L G P G K + ++ A
Sbjct: 188 CGTVEYMAPEVVN--RRG--HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKA- 242
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKR-----GTVEELLAYPFVT 324
+L MP+ SPE + +R +++ R VEE+ + F +
Sbjct: 243 ----KLGMPQFLSPEAQSLLRMLFKRNPANRLGAGPDGVEEIKRHSFFS 287
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 109 bits (272), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 137/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ +G G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME+M G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +K+ADFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 109 bits (272), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 137/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ +G G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME+M G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +K+ADFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 133/283 (46%), Gaps = 30/283 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN---TTSST--IIRHQAAHEAEILKRLDSQFIVK 109
LG G +V K R + + YA K + T SS + R E ILK + ++
Sbjct: 19 LGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVIT 78
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H V Y + ++ + E + G LFD L ++ L+E+ + ++L G+ YLH +QI H
Sbjct: 79 LHEV-YENKTDVILIGELVAGGELFDFLAEKESLTEEEATEFLKQILNGVYYLHSLQIAH 137
Query: 170 GDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +KI DFG++ ++ G GT
Sbjct: 138 FDLKPENIMLLDRNVPKPRIKIIDFGLAHKID---------------FGNEFKNIFGTPE 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + +A + A+ +
Sbjct: 183 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-DTKQETLANVSAVNYEFE 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
E S + F+R L KD +KR T+++ L +P++ + +
Sbjct: 238 DEYFSNTSALAKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDT 280
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 108 bits (271), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 24/281 (8%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
KL +G G+ G V+K ++ + A+K+++ + E +L + DS ++ K
Sbjct: 26 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 85
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
+ Y + ++ +ME++ GS D L L E I+ + +LKGL YLH + IH
Sbjct: 86 YGS-YLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHR 143
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
DIK +N+L++ GEVK+ADFGV+ + +T+ +GT +M+PE
Sbjct: 144 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN--------------XFVGTPFWMAPE 189
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ Y D+WSLG+ +E G P M ++ I +
Sbjct: 190 VIKQSA----YDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLIPKNNPPTLEG 241
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
S + FV +CL K+ R T +ELL + F+ + + ++
Sbjct: 242 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS 282
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 132/281 (46%), Gaps = 24/281 (8%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
KL +G G+ G V+K ++ + A+K+++ + E +L + DS ++ K
Sbjct: 31 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 90
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
+ Y + ++ +ME++ GS D L L E I+ + +LKGL YLH + IH
Sbjct: 91 YGS-YLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHR 148
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
DIK +N+L++ GEVK+ADFGV+ + +T+ +GT +M+PE
Sbjct: 149 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN--------------TFVGTPFWMAPE 194
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ Y D+WSLG+ +E G P + M ++ I +
Sbjct: 195 VIKQSA----YDSKADIWSLGITAIELARGEPP----HSELHPMKVLFLIPKNNPPTLEG 246
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
S + FV +CL K+ R T +ELL + F+ + + ++
Sbjct: 247 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS 287
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 108 bits (270), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 24/281 (8%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
KL +G G+ G V+K ++ + A+K+++ + E +L + DS ++ K
Sbjct: 11 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
+ Y + ++ +ME++ GS D L L E I+ + +LKGL YLH + IH
Sbjct: 71 YGS-YLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
DIK +N+L++ GEVK+ADFGV+ + +T+ +GT +M+PE
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN--------------TFVGTPFWMAPE 174
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ Y D+WSLG+ +E G P M ++ I +
Sbjct: 175 VIKQSA----YDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLIPKNNPPTLEG 226
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
S + FV +CL K+ R T +ELL + F+ + + ++
Sbjct: 227 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS 267
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 22/285 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G VYK +++++ ++ A KV+ T S + E EIL D +IVK +
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV-EIEILATCDHPYIVKLLGAY 85
Query: 115 YTIEGEICFVMEHMERGSLFDS--LRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y +G++ ++E G++ D+ L + + L+E I V ++L+ L +LH +IIH D+
Sbjct: 86 YH-DGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDL 143
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K N+L+ +G++++ADFGVS +T + +GT +M+PE V
Sbjct: 144 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD--------------SFIGTPYWMAPEVV 189
Query: 233 DSERWGG-DYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
E Y + D+WSLG+ ++E P P + L A L P
Sbjct: 190 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--PMRVLLKIAKSDPPTLLTPSK 247
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
S EFR F++ L+K+ R + +LL +PFV+ +S+ + L+
Sbjct: 248 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELV 292
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 84/285 (29%), Positives = 142/285 (49%), Gaps = 22/285 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G VYK +++++ ++ A KV+ T S + E EIL D +IVK +
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIV-EIEILATCDHPYIVKLLGAY 77
Query: 115 YTIEGEICFVMEHMERGSLFDS--LRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y +G++ ++E G++ D+ L + + L+E I V ++L+ L +LH +IIH D+
Sbjct: 78 YH-DGKLWIMIEFCPGGAV-DAIMLELDRGLTEPQIQVVCRQMLEALNFLHSKRIIHRDL 135
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K N+L+ +G++++ADFGVS +T + +GT +M+PE V
Sbjct: 136 KAGNVLMTLEGDIRLADFGVSAKNLKTLQKRD--------------SFIGTPYWMAPEVV 181
Query: 233 DSERWGG-DYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
E Y + D+WSLG+ ++E P P + L A L P
Sbjct: 182 MCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELN--PMRVLLKIAKSDPPTLLTPSK 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
S EFR F++ L+K+ R + +LL +PFV+ +S+ + L+
Sbjct: 240 WSVEFRDFLKIALDKNPETRPSAAQLLEHPFVSSITSNKALRELV 284
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 108 bits (270), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 76/281 (27%), Positives = 131/281 (46%), Gaps = 24/281 (8%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
KL +G G+ G V+K ++ + A+K+++ + E +L + DS ++ K
Sbjct: 11 KLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKY 70
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
+ Y + ++ +ME++ GS D L L E I+ + +LKGL YLH + IH
Sbjct: 71 YGS-YLKDTKLWIIMEYLGGGSALDLLE-PGPLDETQIATILREILKGLDYLHSEKKIHR 128
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
DIK +N+L++ GEVK+ADFGV+ + +T+ +GT +M+PE
Sbjct: 129 DIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRN--------------XFVGTPFWMAPE 174
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ Y D+WSLG+ +E G P M ++ I +
Sbjct: 175 VIKQSA----YDSKADIWSLGITAIELARGEPPHSELHP----MKVLFLIPKNNPPTLEG 226
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
S + FV +CL K+ R T +ELL + F+ + + ++
Sbjct: 227 NYSKPLKEFVEACLNKEPSFRPTAKELLKHKFILRNAKKTS 267
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 107 bits (267), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 76/277 (27%), Positives = 137/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ +G G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +K+ADFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--------STIIRHQAAHEAEILKRLDSQF 106
+G G G VY + A++ +N + I+ + I+ LDS
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
Y + E+ VME++ GSL D + + E I+ V L+ L++LH Q
Sbjct: 86 --------YLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGV-SRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH DIK N+L+ G VK+ DFG ++I E +GT
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS---------------XMVGTPY 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+M+PE V + YG D+WSLG++ +E + G P + E P + A
Sbjct: 182 WMAPEVVTRKA----YGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPE 235
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
L+ PE S FR F+ CLE D KRG+ +ELL + F+ S++ LI
Sbjct: 236 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELLQHQFLKIAKPLSSLTPLI 286
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 107 bits (266), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 55 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 115 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 173
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GATW 217
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 218 TLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 268
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 269 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 35 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 94
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 95 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 153
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 154 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 197
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 198 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 248
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 249 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 106 bits (265), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 21 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 80
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 81 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 139
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 140 TFEYLHSLDLIYRDLKPENLLIDEQGYIQVTDFGFAKRVK----------------GRTW 183
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 184 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 234
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 235 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 267
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 75/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADEP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--------STIIRHQAAHEAEILKRLDSQF 106
+G G G VY + A++ +N + I+ + I+ LDS
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
Y + E+ VME++ GSL D + + E I+ V L+ L++LH Q
Sbjct: 86 --------YLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGV-SRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH DIK N+L+ G VK+ DFG ++I E +GT
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS---------------TMVGTPY 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+M+PE V + YG D+WSLG++ +E + G P + E P + A
Sbjct: 182 WMAPEVVTRKA----YGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPE 235
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
L+ PE S FR F+ CL+ D KRG+ +ELL + F+ S++ LI
Sbjct: 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLI 286
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--------STIIRHQAAHEAEILKRLDSQF 106
+G G G VY + A++ +N + I+ + I+ LDS
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 86
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
Y + E+ VME++ GSL D + + E I+ V L+ L++LH Q
Sbjct: 87 --------YLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGV-SRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH DIK N+L+ G VK+ DFG ++I E +GT
Sbjct: 138 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS---------------XMVGTPY 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+M+PE V + YG D+WSLG++ +E + G P + E P + A
Sbjct: 183 WMAPEVVTRKA----YGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPE 236
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
L+ PE S FR F+ CLE D KRG+ +EL+ + F+ S++ LI
Sbjct: 237 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLI 287
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NL+I+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLIIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIIISK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--------STIIRHQAAHEAEILKRLDSQF 106
+G G G VY + A++ +N + I+ + I+ LDS
Sbjct: 28 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 85
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
Y + E+ VME++ GSL D + + E I+ V L+ L++LH Q
Sbjct: 86 --------YLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQ 136
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGV-SRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH DIK N+L+ G VK+ DFG ++I E +GT
Sbjct: 137 VIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEM---------------VGTPY 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+M+PE V + YG D+WSLG++ +E + G P + E P + A
Sbjct: 182 WMAPEVVTRKA----YGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPE 235
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
L+ PE S FR F+ CL+ D KRG+ +ELL + F+ S++ LI
Sbjct: 236 LQNPEKLSAIFRDFLNRCLDMDVEKRGSAKELLQHQFLKIAKPLSSLTPLI 286
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 18 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 76
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 77 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 135
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 136 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 179
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 180 RTWTLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 230
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 231 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 266
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 33 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 194
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 195 RTWTLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 245
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 246 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 33 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 194
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 195 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 245
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 246 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ + G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYQMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 105 bits (262), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 134/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + +E A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFAEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAEIL 99
+ ++ +++ LG G+ G V V+H+++ + YA+K+L+ ++ +E IL
Sbjct: 29 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 88
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 89 QAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 147
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTWXL 191
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 192 C-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIYEK 242
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 243 IVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAEIL 99
+ ++ +++ LG G+ G V V+H+++ + YA+K+L+ ++ +E IL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 97 QAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTWXL 199
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 200 C-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIYEK 250
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 251 IVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME+ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NL+I+ +G +K+ DFG+++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGLAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAEIL 99
+ ++ +++ LG G+ G V V+H+++ + YA+K+L+ ++ +E IL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 97 QAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTWXL 199
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 200 C-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIYEK 250
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 251 IVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAEIL 99
+ ++ +++ LG G+ G V V+H+++ + YA+K+L+ ++ +E IL
Sbjct: 57 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 116
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 117 QAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 175
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 176 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTWXL 219
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 220 C-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIYEK 270
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 271 IVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 135/272 (49%), Gaps = 29/272 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAEIL 99
+ ++ +++ LG G+ G V V+H+++ + YA+K+L+ ++ +E IL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 97 QAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTWXL 199
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 200 C-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIYEK 250
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 251 IVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 105 bits (261), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME+ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NL+I+ +G +K+ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAEIL 99
+ ++ +++ LG G+ G V V+H+++ + YA+K+L+ ++ +E IL
Sbjct: 37 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 96
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++ F+VK F + VME+ G +F LR + SE A +++
Sbjct: 97 QAVNFPFLVKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YLH + +I+ D+KP NL+I+ +G +K+ DFG ++ V+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------GRTWXL 199
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 200 C-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIYEK 250
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 251 IVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + E A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 29 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 88
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + E A +++
Sbjct: 89 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 147
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 148 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 191
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 192 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 242
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 243 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 275
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 55 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 114
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + E A +++
Sbjct: 115 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 173
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 174 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 217
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 218 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 268
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 269 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 301
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + E A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 104 bits (260), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H+++ + +A+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H+++ + +A+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 137/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H+++ + +A+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEYSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 128/291 (43%), Gaps = 41/291 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--------STIIRHQAAHEAEILKRLDSQF 106
+G G G VY + A++ +N + I+ + I+ LDS
Sbjct: 29 IGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS-- 86
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
Y + E+ VME++ GSL D + + E I+ V L+ L++LH Q
Sbjct: 87 --------YLVGDELWVVMEYLAGGSLTDVV-TETCMDEGQIAAVCRECLQALEFLHSNQ 137
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGV-SRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH +IK N+L+ G VK+ DFG ++I E +GT
Sbjct: 138 VIHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRS---------------TMVGTPY 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+M+PE V + YG D+WSLG++ +E + G P + E P + A
Sbjct: 183 WMAPEVVTRKA----YGPKVDIWSLGIMAIEMIEGEPPYL--NENPLRALYLIATNGTPE 236
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
L+ PE S FR F+ CLE D KRG+ +EL+ + F+ S++ LI
Sbjct: 237 LQNPEKLSAIFRDFLNRCLEMDVEKRGSAKELIQHQFLKIAKPLSSLTPLI 287
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 129/278 (46%), Gaps = 30/278 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKV-----LNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K L+++ + R + E IL+ + I+
Sbjct: 13 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 72
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H +F + ++ ++E + G LFD L ++ L+ED + ++L G+ YLH +I H
Sbjct: 73 LHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 131
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E G GT
Sbjct: 132 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---------------AGNEFKNIFGTPE 176
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + + I A+ +
Sbjct: 177 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-ETKQETLTNISAVNYDFD 231
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
E S + F+R L KD ++R T+ + L + ++
Sbjct: 232 EEYFSNTSELAKDFIRRLLVKDPKRRMTIAQSLEHSWI 269
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 104 bits (260), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + E A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 104 bits (259), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 29/273 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRK 310
I G ++ P S + + +R+ L+ D K
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTK 279
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------------T 195
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 196 WXLAGTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT Y++P + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEYLAPAIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 132/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGR-----------------T 195
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 196 WXLXGTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 136/277 (49%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME+ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NL+I+ +G +++ DFG+++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGLAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME+ G +F LR + SE A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NL+I+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 33 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+ K F + VME+ G +F LR + SE A +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NL+I+ +G +K+ DFG ++ V+ G
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------G 194
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 195 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 245
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 246 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 33 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+ K F + VME+ G +F LR + SE A +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQ 150
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NL+I+ +G +K+ DFG ++ V+ G
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------G 194
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 195 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 245
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 246 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ RG ++ L+ K E + + L Y H ++IH DI
Sbjct: 81 YFHDA-TRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------XXLXGTLDYLPPEMI 183
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 184 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 229
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 33 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + E A +
Sbjct: 92 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 194
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 195 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 245
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 246 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + E A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ RG ++ L+ K E + + L Y H ++IH DI
Sbjct: 81 YFHDA-TRVYLILEYAPRGEVYKELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 183
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 184 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 229
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 135/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME++ G +F LR + E A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 72/272 (26%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAEIL 99
+ ++ +++ LG G+ G V V+H+++ + YA+K+L+ ++ +E IL
Sbjct: 29 NTAHLDQFERIKTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIL 88
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++ F+VK F + VME++ G +F LR + E A +++
Sbjct: 89 QAVNFPFLVKLEFSFKD-NSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTF 147
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 148 EYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTWXL 191
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 192 C-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIYEK 242
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 243 IVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 273
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 134/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 32 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 90
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+VK F + VME+ G +F LR + E A +
Sbjct: 91 EKRILQAVNFPFLVKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 149
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NL+I+ +G +K+ DFG ++ V+ G
Sbjct: 150 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------G 193
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 194 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 244
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 245 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-------EAEILKRLDSQF 106
LG G G V +K+ A+K+++ I + A E EILK+L+
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K F + I V+E ME G LFD + K+L E Y++L +QYLH
Sbjct: 77 IIKIKNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+L++ + E +KI DFG S+I+ ET GT
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------TLCGT 179
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + S G Y A D WSLGV++ CL G+ P F E ++L I G
Sbjct: 180 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSLKDQITSG 235
Query: 284 ERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
+ +PE S + V+ L D + R T EE L +P++ + L+
Sbjct: 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-------EAEILKRLDSQF 106
LG G G V +K+ A+K+++ I + A E EILK+L+
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K F + I V+E ME G LFD + K+L E Y++L +QYLH
Sbjct: 77 IIKIKNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+L++ + E +KI DFG S+I+ ET GT
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------TLCGT 179
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + S G Y A D WSLGV++ CL G+ P F E ++L I G
Sbjct: 180 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSLKDQITSG 235
Query: 284 ERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
+ +PE S + V+ L D + R T EE L +P++ + L+
Sbjct: 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 103 bits (257), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-------EAEILKRLDSQF 106
LG G G V +K+ A+K+++ I + A E EILK+L+
Sbjct: 16 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 75
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K F + I V+E ME G LFD + K+L E Y++L +QYLH
Sbjct: 76 IIKIKNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 133
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+L++ + E +KI DFG S+I+ ET GT
Sbjct: 134 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------TLCGT 178
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + S G Y A D WSLGV++ CL G+ P F E ++L I G
Sbjct: 179 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSLKDQITSG 234
Query: 284 ERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
+ +PE S + V+ L D + R T EE L +P++ + L+
Sbjct: 235 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 290
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 80/279 (28%), Positives = 120/279 (43%), Gaps = 28/279 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R + S I ALKVL + HQ E EI L I++ +
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 76 YFHD-STRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDI 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R A GT Y+ PE +
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRA----------------ALCGTLDYLPPEMI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG P D I + F P+
Sbjct: 179 E----GRMHDEKVDLWSLGVLCYEFLVGKPPFEA-NTYQDTYKRISRVEFT----FPDFV 229
Query: 293 SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
+ R + L+ + +R + E+L +P++T SS +
Sbjct: 230 TEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-------EAEILKRLDSQF 106
LG G G V +K+ A+K+++ I + A E EILK+L+
Sbjct: 23 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 82
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K F + I V+E ME G LFD + K+L E Y++L +QYLH
Sbjct: 83 IIKIKNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 140
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+L++ + E +KI DFG S+I+ ET GT
Sbjct: 141 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------TLCGT 185
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + S G Y A D WSLGV++ CL G+ P F E ++L I G
Sbjct: 186 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSLKDQITSG 241
Query: 284 ERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
+ +PE S + V+ L D + R T EE L +P++ + L+
Sbjct: 242 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 297
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 92/296 (31%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-------EAEILKRLDSQF 106
LG G G V +K+ A+K+++ I + A E EILK+L+
Sbjct: 17 TLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 76
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K F + I V+E ME G LFD + K+L E Y++L +QYLH
Sbjct: 77 IIKIKNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 134
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+L++ + E +KI DFG S+I+ ET GT
Sbjct: 135 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------TLCGT 179
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + S G Y A D WSLGV++ CL G+ P F E ++L I G
Sbjct: 180 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSLKDQITSG 235
Query: 284 ERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
+ +PE S + V+ L D + R T EE L +P++ + L+
Sbjct: 236 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 291
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 74/274 (27%), Positives = 133/274 (48%), Gaps = 29/274 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAE 97
S + + ++ LG G+ G V V+H++S + YA+K+L+ ++ +E
Sbjct: 34 SQNTAQLDQFDRIKTLGTGSFGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKR 93
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK 157
IL+ ++ F+VK F + VME++ G +F LR + SE A +++
Sbjct: 94 ILQAVNFPFLVKLEFSFKD-NSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVL 152
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
+YLH + +I+ D+KP NLLI+ +G +++ DFG ++ V+ G
Sbjct: 153 TFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVK----------------GRTW 196
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
C GT ++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 197 XLC-GTPEALAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIY 247
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 248 EKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 280
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 134/272 (49%), Gaps = 29/272 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAHEAEIL 99
+ ++ +++ LG G+ G V V+H+++ + YA+K+L+ ++ +E I
Sbjct: 37 NTAHLDQFERIRTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQ 96
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++ F+VK F + V+E+ G +F LR + SE A +++
Sbjct: 97 QAVNFPFLVKLEFSFKD-NSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTF 155
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YLH + +I+ D+KP NLLI+ +G +K+ADFG ++ V+ G
Sbjct: 156 EYLHSLDLIYRDLKPENLLIDQQGYIKVADFGFAKRVK----------------GRTWXL 199
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P + +
Sbjct: 200 C-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--IQIYEK 250
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I G ++ P S + + +R+ L+ D KR
Sbjct: 251 IVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 89/299 (29%), Positives = 139/299 (46%), Gaps = 33/299 (11%)
Query: 25 QFRRRRHHFPTSNPTS-PDVENISDLKKLTVLGHGNGGIVYKVRH---QKSNSIYALKVL 80
Q +H T+N T + I + + L VLG G G V+ VR + +YA+KVL
Sbjct: 31 QLLTVKHELRTANLTGHAEKVGIENFELLKVLGTGAYGKVFLVRKISGHDTGKLYAMKVL 90
Query: 81 NTTSSTIIRHQAAH---EAEILKRL-DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDS 136
+ H E ++L+ + S F+V H F T E ++ +++++ G LF
Sbjct: 91 KKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAFQT-ETKLHLILDYINGGELFTH 149
Query: 137 LRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR-- 194
L R++ +E + ++ L++LH + II+ DIK N+L++ G V + DFG+S+
Sbjct: 150 LSQRERFTEHEVQIYVGEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEF 209
Query: 195 IVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGF--AGDVWSLGV 252
+ +ET E A GT YM+P+ V GGD G A D WSLGV
Sbjct: 210 VADET---------------ERAYDFCGTIEYMAPDIVR----GGDSGHDKAVDWWSLGV 250
Query: 253 VVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ E L G P GEK + A I P+ S + ++ L KD +KR
Sbjct: 251 LMYELLTGASPFTVDGEK-NSQAEISRRILKSEPPYPQEMSALAKDLIQRLLMKDPKKR 308
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 76 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R A GT Y+ PE +
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRA----------------ALCGTLDYLPPEMI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 179 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 224
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 128/278 (46%), Gaps = 30/278 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKV-----LNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K L+++ + R + E IL+ + I+
Sbjct: 20 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIIT 79
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H +F + ++ ++E + G LFD L ++ L+ED + ++L G+ YLH +I H
Sbjct: 80 LHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 138
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E G GT
Sbjct: 139 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---------------AGNEFKNIFGTPE 183
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + + I A+ +
Sbjct: 184 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-ETKQETLTNISAVNYDFD 238
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
E S + F+R L KD ++R + + L + ++
Sbjct: 239 EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 276
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 102 bits (254), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/285 (29%), Positives = 133/285 (46%), Gaps = 32/285 (11%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA---HEAEILKRLDS 104
D + V+G G G V VRH+ S +YA+K+L + I R +A E +I+ +S
Sbjct: 76 DYDVVKVIGRGAFGEVQLVRHKASQKVYAMKLL-SKFEMIKRSDSAFFWEERDIMAFANS 134
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
++V+ F + + VME+M G L +L + E V+ L +H
Sbjct: 135 PWVVQLFCAFQD-DKYLYMVMEYMPGGDLV-NLMSNYDVPEKWAKFYTAEVVLALDAIHS 192
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC---M 221
M +IH D+KP N+L++ G +K+ADFG ++ET + C +
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDET----------------GMVHCDTAV 236
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG---FGEKPDLMALIC 278
GT Y+SPE + S+ G YG D WS+GV + E LVG P G +M
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMDHKN 296
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWR-KRGTVEELLAYPF 322
++CF E E+ + A F+ +++ R R VEE+ +PF
Sbjct: 297 SLCFPEDAEISKHAKNLICAFLT---DREVRLGRNGVEEIKQHPF 338
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 82/284 (28%), Positives = 124/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 79 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R A GT Y+ PE +
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRA----------------ALCGTLDYLPPEMI 181
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 182 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 227
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-------EAEILKRLDSQF 106
LG G G V +K+ A+++++ I + A E EILK+L+
Sbjct: 156 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 215
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K F + I V+E ME G LFD + K+L E Y++L +QYLH
Sbjct: 216 IIKIKNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 273
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+L++ + E +KI DFG S+I+ ET GT
Sbjct: 274 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------TLCGT 318
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + S G Y A D WSLGV++ CL G+ P F E ++L I G
Sbjct: 319 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSLKDQITSG 374
Query: 284 ERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
+ +PE S + V+ L D + R T EE L +P++ + L+
Sbjct: 375 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 430
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 81 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEXI 183
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 184 E----GRXHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 229
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPXLREVLEHPWITANSS 270
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 133/277 (48%), Gaps = 30/277 (10%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH--QAAH 94
NP + ++ +++ LG G+ G V V+H ++ + YA+K+L+ ++ +
Sbjct: 33 NPAQ-NTAHLDQFERIKTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLN 91
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E IL+ ++ F+ K F + VME+ G +F LR + E A +
Sbjct: 92 EKRILQAVNFPFLTKLEFSFKD-NSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQ 150
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
++ +YLH + +I+ D+KP NL+I+ +G +K+ DFG ++ V+ G
Sbjct: 151 IVLTFEYLHSLDLIYRDLKPENLMIDQQGYIKVTDFGFAKRVK----------------G 194
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
C GT Y++PE + S+ Y A D W+LGV++ E G+ P F ++P +
Sbjct: 195 RTWXLC-GTPEYLAPEIILSK----GYNKAVDWWALGVLIYEMAAGYPPF--FADQP--I 245
Query: 275 ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ I G ++ P S + + +R+ L+ D KR
Sbjct: 246 QIYEKIVSG-KVRFPSHFSSDLKDLLRNLLQVDLTKR 281
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 91/296 (30%), Positives = 135/296 (45%), Gaps = 34/296 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-------EAEILKRLDSQF 106
LG G G V +K+ A+++++ I + A E EILK+L+
Sbjct: 142 TLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPC 201
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K F + I V+E ME G LFD + K+L E Y++L +QYLH
Sbjct: 202 IIKIKNFFDAEDYYI--VLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLAVQYLHENG 259
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+L++ + E +KI DFG S+I+ ET GT
Sbjct: 260 IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMR---------------TLCGT 304
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + S G Y A D WSLGV++ CL G+ P F E ++L I G
Sbjct: 305 PTYLAPEVLVSVGTAG-YNRAVDCWSLGVILFICLSGYPP---FSEHRTQVSLKDQITSG 360
Query: 284 ERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
+ +PE S + V+ L D + R T EE L +P++ + L+
Sbjct: 361 KYNFIPEVWAEVSEKALDLVKKLLVVDPKARFTTEEALRHPWLQDEDMKRKFQDLL 416
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 127/278 (45%), Gaps = 30/278 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKV-----LNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G IV K R + + YA K L ++ + R + E IL+ + I+
Sbjct: 34 LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNIIT 93
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
H +F + ++ ++E + G LFD L ++ L+ED + ++L G+ YLH +I H
Sbjct: 94 LHDIFEN-KTDVVLILELVSGGELFDFLAEKESLTEDEATQFLKQILDGVHYLHSKRIAH 152
Query: 170 GDIKPSNLLINGKG----EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
D+KP N+++ K +K+ DFG++ +E G GT
Sbjct: 153 FDLKPENIMLLDKNVPNPRIKLIDFGIAHKIE---------------AGNEFKNIFGTPE 197
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
+++PE V+ E G D+WS+GV+ L G P +G K + + I A+ +
Sbjct: 198 FVAPEIVNYE----PLGLEADMWSIGVITYILLSGASPFLG-ETKQETLTNISAVNYDFD 252
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
E S + F+R L KD ++R + + L + ++
Sbjct: 253 EEYFSNTSELAKDFIRRLLVKDPKRRMXIAQSLEHSWI 290
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 101 bits (252), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 133/288 (46%), Gaps = 40/288 (13%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTS------STIIRHQAAHEAEILKRLDSQFI 107
+LG G+ G V K + + + YA+KV+N S STI+R E E+LK+LD I
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-----EVELLKKLDHPNI 83
Query: 108 VKCHAVFYTIEGEICF--VMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
+K +F +E F V E G LFD + RK+ SE + + +V G+ Y+H
Sbjct: 84 MK---LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 166 QIIHGDIKPSNLLINGKG---EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
I+H D+KP N+L+ K ++KI DFG+S ++ +G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------------IG 185
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y++PE + G Y DVWS GV++ L G P G E D++ + +
Sbjct: 186 TAYYIAPEVL-----RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKY 239
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSS 330
L T S + + +R L R T + L +P++ K SS +
Sbjct: 240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSSET 287
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 102 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 204
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 205 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 250
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 251 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 31/294 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S L +G G+ GIV + S + A+K ++ R +E I++ +
Sbjct: 74 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHEN 132
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+V+ + Y + E+ VME +E G+L D + +++E+ I+ V VL+ L LH
Sbjct: 133 VVEMYNS-YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 190
Query: 167 IIHGDIKPSNLLINGKGEVKIADFG----VSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IH DIK ++L+ G VK++DFG VS+ V + +G
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK------------------XLVG 232
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE + +G + D+WSLG++V+E + G P F E P +
Sbjct: 233 TPYWMAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNL 286
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
RL+ SP + F+ L +D +R T ELL +PF+ K ++I L+
Sbjct: 287 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLM 340
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 132/286 (46%), Gaps = 40/286 (13%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTS------STIIRHQAAHEAEILKRLDSQFI 107
+LG G+ G V K + + + YA+KV+N S STI+R E E+LK+LD I
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-----EVELLKKLDHPNI 83
Query: 108 VKCHAVFYTIEGEICF--VMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
+K +F +E F V E G LFD + RK+ SE + + +V G+ Y+H
Sbjct: 84 MK---LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 166 QIIHGDIKPSNLLINGKG---EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
I+H D+KP N+L+ K ++KI DFG+S ++ +G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------------IG 185
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y++PE + G Y DVWS GV++ L G P G E D++ + +
Sbjct: 186 TAYYIAPEVL-----RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKY 239
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
L T S + + +R L R T + L +P++ K SS
Sbjct: 240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 74
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 75 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 133
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 134 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 177
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 178 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 223
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 224 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 267
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 101 bits (251), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 86/286 (30%), Positives = 132/286 (46%), Gaps = 40/286 (13%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTS------STIIRHQAAHEAEILKRLDSQFI 107
+LG G+ G V K + + + YA+KV+N S STI+R E E+LK+LD I
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR-----EVELLKKLDHPNI 83
Query: 108 VKCHAVFYTIEGEICF--VMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
+K +F +E F V E G LFD + RK+ SE + + +V G+ Y+H
Sbjct: 84 MK---LFEILEDSSSFYIVGELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH 140
Query: 166 QIIHGDIKPSNLLINGKG---EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
I+H D+KP N+L+ K ++KI DFG+S ++ +G
Sbjct: 141 NIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDR---------------IG 185
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y++PE + G Y DVWS GV++ L G P G E D++ + +
Sbjct: 186 TAYYIAPEVL-----RGTYDEKCDVWSAGVILYILLSGTPPFYGKNEY-DILKRVETGKY 239
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
L T S + + +R L R T + L +P++ K SS
Sbjct: 240 AFDLPQWRTISDDAKDLIRKMLTFHPSLRITATQCLEHPWIQKYSS 285
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 31/294 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S L +G G+ GIV + S + A+K ++ R +E I++ +
Sbjct: 20 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHEN 78
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+V+ + Y + E+ VME +E G+L D + +++E+ I+ V VL+ L LH
Sbjct: 79 VVEMYNS-YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 136
Query: 167 IIHGDIKPSNLLINGKGEVKIADFG----VSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IH DIK ++L+ G VK++DFG VS+ V + +G
Sbjct: 137 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK------------------XLVG 178
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE + +G + D+WSLG++V+E + G P F E P +
Sbjct: 179 TPYWMAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNL 232
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
RL+ SP + F+ L +D +R T ELL +PF+ K ++I L+
Sbjct: 233 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLM 286
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 31/294 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S L +G G+ GIV + S + A+K ++ R +E I++ +
Sbjct: 29 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHEN 87
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+V+ + Y + E+ VME +E G+L D + +++E+ I+ V VL+ L LH
Sbjct: 88 VVEMYNS-YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 145
Query: 167 IIHGDIKPSNLLINGKGEVKIADFG----VSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IH DIK ++L+ G VK++DFG VS+ V + +G
Sbjct: 146 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK------------------XLVG 187
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE + +G + D+WSLG++V+E + G P F E P +
Sbjct: 188 TPYWMAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNL 241
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
RL+ SP + F+ L +D +R T ELL +PF+ K ++I L+
Sbjct: 242 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLM 295
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 92
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 93 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 151
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 152 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 195
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 196 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 241
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 242 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 282
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 101 bits (251), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
+++ + L +LG G G V V+ + + YA+K+L + + + AH E +L+
Sbjct: 146 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQN 204
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + SED ++ L Y
Sbjct: 205 SRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 263
Query: 162 LHGMQ-IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
LH + +++ D+K NL+++ G +KI DFG+ + G
Sbjct: 264 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------------EGIKDGATMKTF 309
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 310 CGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILM- 363
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T PE + + L+KD ++R
Sbjct: 364 ---EEIRFPRTLGPEAKSLLSGLLKKDPKQR 391
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 31/294 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S L +G G+ GIV + S + A+K ++ R +E I++ +
Sbjct: 31 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHEN 89
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+V+ + Y + E+ VME +E G+L D + +++E+ I+ V VL+ L LH
Sbjct: 90 VVEMYNS-YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 147
Query: 167 IIHGDIKPSNLLINGKGEVKIADFG----VSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IH DIK ++L+ G VK++DFG VS+ V + +G
Sbjct: 148 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK------------------XLVG 189
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE + +G + D+WSLG++V+E + G P F E P +
Sbjct: 190 TPYWMAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNL 243
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
RL+ SP + F+ L +D +R T ELL +PF+ K ++I L+
Sbjct: 244 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLM 297
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 31/294 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S L +G G+ GIV + S + A+K ++ R +E I++ +
Sbjct: 151 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHEN 209
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+V+ + Y + E+ VME +E G+L D + +++E+ I+ V VL+ L LH
Sbjct: 210 VVEMYNS-YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 267
Query: 167 IIHGDIKPSNLLINGKGEVKIADFG----VSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IH DIK ++L+ G VK++DFG VS+ V + +G
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK------------------XLVG 309
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE + +G + D+WSLG++V+E + G P F E P +
Sbjct: 310 TPYWMAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNL 363
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
RL+ SP + F+ L +D +R T ELL +PF+ K ++I L+
Sbjct: 364 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLM 417
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
+++ + L +LG G G V V+ + + YA+K+L + + + AH E +L+
Sbjct: 149 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQN 207
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + SED ++ L Y
Sbjct: 208 SRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 266
Query: 162 LHGMQ-IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
LH + +++ D+K NL+++ G +KI DFG+ + G
Sbjct: 267 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------------EGIKDGATMKTF 312
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 313 CGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILM- 366
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T PE + + L+KD ++R
Sbjct: 367 ---EEIRFPRTLGPEAKSLLSGLLKKDPKQR 394
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 100 bits (250), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 76 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 179 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 224
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 80 YFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 139 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 182
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 183 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 228
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 229 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 272
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 79 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 181
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 182 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 227
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/294 (27%), Positives = 136/294 (46%), Gaps = 31/294 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S L +G G+ GIV + S + A+K ++ R +E I++ +
Sbjct: 24 SYLDNFIKIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQR-RELLFNEVVIMRDYQHEN 82
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+V+ + Y + E+ VME +E G+L D + +++E+ I+ V VL+ L LH
Sbjct: 83 VVEMYNS-YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIAAVCLAVLQALSVLHAQG 140
Query: 167 IIHGDIKPSNLLINGKGEVKIADFG----VSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IH DIK ++L+ G VK++DFG VS+ V + +G
Sbjct: 141 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRK------------------XLVG 182
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE + +G + D+WSLG++V+E + G P F E P +
Sbjct: 183 TPYWMAPELISRLPYGPEV----DIWSLGIMVIEMVDGEPPY--FNEPPLKAMKMIRDNL 236
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
RL+ SP + F+ L +D +R T ELL +PF+ K ++I L+
Sbjct: 237 PPRLKNLHKVSPSLKGFLDRLLVRDPAQRATAAELLKHPFLAKAGPPASIVPLM 290
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 81 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 183
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 184 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 229
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 270
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 100 bits (250), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 76 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TXLCGTLDYLPPEMI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 179 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 224
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 77 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 136 KPENLLLGSAGELKIADFGWSCHAPSSRR----------------TTLSGTLDYLPPEMI 179
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 180 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 225
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 266
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 79 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 181
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 182 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 227
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 76 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TELCGTLDYLPPEMI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 179 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 224
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 77 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRD----------------TLCGTLDYLPPEMI 179
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 180 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 225
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
+++ + L +LG G G V V+ + + YA+K+L + + + AH E +L+
Sbjct: 6 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQN 64
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + SED ++ L Y
Sbjct: 65 SRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 123
Query: 162 LHGMQ-IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
LH + +++ D+K NL+++ G +KI DFG+ + G
Sbjct: 124 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------------EGIKDGATMKXF 169
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 170 CGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILM- 223
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T PE + + L+KD ++R
Sbjct: 224 ---EEIRFPRTLGPEAKSLLSGLLKKDPKQR 251
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
+++ + L +LG G G V V+ + + YA+K+L + + + AH E +L+
Sbjct: 7 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQN 65
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + SED ++ L Y
Sbjct: 66 SRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 124
Query: 162 LHGMQ-IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
LH + +++ D+K NL+++ G +KI DFG+ + G
Sbjct: 125 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------------EGIKDGATMKXF 170
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 171 CGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILM- 224
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T PE + + L+KD ++R
Sbjct: 225 ---EEIRFPRTLGPEAKSLLSGLLKKDPKQR 252
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 76 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------XXLCGTLDYLPPEMI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 179 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 224
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 101
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 102 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 160
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 161 KPENLLLGSAGELKIADFGWSVHAPSSRRDD----------------LCGTLDYLPPEMI 204
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 205 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 250
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 251 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 291
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 79 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------XXLCGTLDYLPPEMI 181
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 182 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 227
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 268
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/271 (27%), Positives = 120/271 (44%), Gaps = 29/271 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
+++ + L +LG G G V V+ + + YA+K+L + + + AH E +L+
Sbjct: 8 TMNEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKK-EVIVAKDEVAHTLTENRVLQN 66
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
F+ F T +CFVME+ G LF L + SED ++ L Y
Sbjct: 67 SRHPFLTALKYSFQT-HDRLCFVMEYANGGELFFHLSRERVFSEDRARFYGAEIVSALDY 125
Query: 162 LHGMQ-IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
LH + +++ D+K NL+++ G +KI DFG+ + G
Sbjct: 126 LHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCK--------------EGIKDGATMKXF 171
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
GT Y++PE ++ DYG A D W LGVV+ E + G P + L LI
Sbjct: 172 CGTPEYLAPEVLED----NDYGRAVDWWGLGVVMYEMMCGRLPFYN-QDHEKLFELILM- 225
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
E + P T PE + + L+KD ++R
Sbjct: 226 ---EEIRFPRTLGPEAKSLLSGLLKKDPKQR 253
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 76 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TDLCGTLDYLPPEMI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 179 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 224
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 76
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 77 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 135
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 136 KPENLLLGSAGELKIADFGWSVHAPSSRRTD----------------LCGTLDYLPPEMI 179
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 180 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 225
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 226 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 269
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 78 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 136
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 137 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------XXLCGTLDYLPPEMI 180
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 181 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 226
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 227 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 270
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 76 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 135 KPENLLLGSAGELKIADFGWSVHAPSSRRTD----------------LCGTLDYLPPEMI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 179 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 224
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 225 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 268
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 134/275 (48%), Gaps = 30/275 (10%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL-----NTTSSTIIRHQAAHEAEILK 100
+ D L V+G G+ V VR +K++ IYA+KV+ N H E +
Sbjct: 4 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE--Q 61
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQ 160
+ F+V H+ F T E + FV+E++ G L ++ ++KL E+ + + L
Sbjct: 62 ASNHPFLVGLHSCFQT-ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN 120
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YLH II+ D+K N+L++ +G +K+ D+G+ + E R G+
Sbjct: 121 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRP------------GDTTSXF 166
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP--LIGFGEKPDLMA--L 276
GT Y++PE + E DYGF+ D W+LGV++ E + G P ++G + PD
Sbjct: 167 CGTPNYIAPEILRGE----DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 222
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ + +++ +P + S + ++S L KD ++R
Sbjct: 223 LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 80
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 81 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 139
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 140 KPENLLLGSAGELKIADFGWSVHAPSSRRTD----------------LCGTLDYLPPEMI 183
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 184 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 229
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 230 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 273
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 134/275 (48%), Gaps = 30/275 (10%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL-----NTTSSTIIRHQAAHEAEILK 100
+ D L V+G G+ V VR +K++ IYA+KV+ N H E +
Sbjct: 8 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFE--Q 65
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQ 160
+ F+V H+ F T E + FV+E++ G L ++ ++KL E+ + + L
Sbjct: 66 ASNHPFLVGLHSCFQT-ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALN 124
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YLH II+ D+K N+L++ +G +K+ D+G+ + E R G+
Sbjct: 125 YLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRP------------GDTTSXF 170
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP--LIGFGEKPDLMA--L 276
GT Y++PE + E DYGF+ D W+LGV++ E + G P ++G + PD
Sbjct: 171 CGTPNYIAPEILRGE----DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDY 226
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ + +++ +P + S + ++S L KD ++R
Sbjct: 227 LFQVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 133/273 (48%), Gaps = 26/273 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTIIRHQAAHEAEILKRL 102
+ D L V+G G+ V VR +K++ IYA+KV+ I + +
Sbjct: 19 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ F+V H+ F T E + FV+E++ G L ++ ++KL E+ + + L YL
Sbjct: 79 NHPFLVGLHSCFQT-ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 137
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H II+ D+K N+L++ +G +K+ D+G+ + E R G+ G
Sbjct: 138 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRP------------GDTTSXFCG 183
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP--LIGFGEKPDLMA--LIC 278
T Y++PE + E DYGF+ D W+LGV++ E + G P ++G + PD +
Sbjct: 184 TPNYIAPEILRGE----DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 239
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ +++ +P + S + ++S L KD ++R
Sbjct: 240 QVILEKQIRIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 79 YFHDAT-RVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 138 KPENLLLGSAGELKIADFGWSVHAPSSRRDD----------------LCGTLDYLPPEMI 181
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 182 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 227
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 28/279 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL T + HQ E EI L I++ +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ + E + + L Y H ++IH DI
Sbjct: 80 YFHDAT-RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 139 KPENLLLGSNGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 182
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG P + + I + F P+
Sbjct: 183 E----GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ-ETYRRISRVEF----TFPDFV 233
Query: 293 SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
+ R + L+ + +R T+ E+L +P++ SS +
Sbjct: 234 TEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/279 (27%), Positives = 122/279 (43%), Gaps = 28/279 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL T + HQ E EI L I++ +
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 79
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ + E + + L Y H ++IH DI
Sbjct: 80 YFHDAT-RVYLILEYAPLGTVYRELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDI 138
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 139 KPENLLLGSNGELKIADFGWSVHAPSSRRD----------------TLCGTLDYLPPEMI 182
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG P + + I + F P+
Sbjct: 183 E----GRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQ-ETYRRISRVEF----TFPDFV 233
Query: 293 SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
+ R + L+ + +R T+ E+L +P++ SS +
Sbjct: 234 TEGARDLISRLLKHNASQRLTLAEVLEHPWIKANSSKPS 272
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 122/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 77
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 78 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 136
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIA+FG S +R GT Y+ PE +
Sbjct: 137 KPENLLLGSAGELKIANFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 180
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 181 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 226
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 227 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 267
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 80/284 (28%), Positives = 123/284 (43%), Gaps = 38/284 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++S I ALKVL + HQ E EI L I++ +
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 78
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 79 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIA+FG S +R GT Y+ PE +
Sbjct: 138 KPENLLLGSAGELKIANFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 181
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 182 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 227
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
P+F R + L+ + +R + E+L +P++T SS +
Sbjct: 228 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSSKPS 271
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 133/273 (48%), Gaps = 26/273 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTIIRHQAAHEAEILKRL 102
+ D L V+G G+ V VR +K++ IYA++V+ I + +
Sbjct: 51 LQDFDLLRVIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ F+V H+ F T E + FV+E++ G L ++ ++KL E+ + + L YL
Sbjct: 111 NHPFLVGLHSCFQT-ESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISLALNYL 169
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H II+ D+K N+L++ +G +K+ D+G+ + E R G+ G
Sbjct: 170 HERGIIYRDLKLDNVLLDSEGHIKLTDYGMCK--EGLRP------------GDTTSTFCG 215
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP--LIGFGEKPDLMA--LIC 278
T Y++PE + E DYGF+ D W+LGV++ E + G P ++G + PD +
Sbjct: 216 TPNYIAPEILRGE----DYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLF 271
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+ +++ +P + S + ++S L KD ++R
Sbjct: 272 QVILEKQIRIPRSLSVKAASVLKSFLNKDPKER 304
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 99.0 bits (245), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/281 (28%), Positives = 121/281 (43%), Gaps = 38/281 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G VY R ++ I ALKVL + HQ E EI L I++ +
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
F+ + ++E+ G+++ L+ K E + + L Y H ++IH DI
Sbjct: 73 YFHDA-TRVYLILEYAPLGTVYRELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDI 131
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL+ GE+KIADFG S +R GT Y+ PE +
Sbjct: 132 KPENLLLGSAGELKIADFGWSVHAPSSRR----------------TTLCGTLDYLPPEMI 175
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ G + D+WSLGV+ E LVG KP A + +R+ E
Sbjct: 176 E----GRMHDEKVDLWSLGVLCYEFLVG---------KPPFEANTYQETY-KRISRVEFT 221
Query: 293 SPEF-----RRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
P+F R + L+ + +R + E+L +P++T SS
Sbjct: 222 FPDFVTEGARDLISRLLKHNPSQRPMLREVLEHPWITANSS 262
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 98.6 bits (244), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 135/290 (46%), Gaps = 24/290 (8%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQ 105
D + LG G +V + + YA K++NT + HQ EA I + L
Sbjct: 31 DDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHP 90
Query: 106 FIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
IV+ H + EG V + + G LF+ + R+ SE S +++L+ + ++H
Sbjct: 91 NIVRLHDSI-SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIHQILESVNHIHQH 149
Query: 166 QIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
I+H D+KP NLL+ K VK+ADFG++ V+ + +A G
Sbjct: 150 DIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQ--------------QAWFGFAG 195
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y+SPE + + YG D+W+ GV++ LVG YP ++ L I A +
Sbjct: 196 TPGYLSPEVLRKD----PYGKPVDIWACGVILYILLVG-YPPFWDEDQHKLYQQIKAGAY 250
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNI 332
+T +PE + + L + KR T ++ L +P+V +RS+ +++
Sbjct: 251 DFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASM 300
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 97.8 bits (242), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 28/224 (12%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAH---EAEILK 100
++ D + L LG G+ G V+ +R + + YA+KVL ++R Q H E +L
Sbjct: 4 SLQDFQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLK--KEIVVRLKQVEHTNDERLMLS 61
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQ 160
+ FI++ F + +I +M+++E G LF LR ++ V A V L+
Sbjct: 62 IVTHPFIIRMWGTFQDAQ-QIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCLALE 120
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YLH II+ D+KP N+L++ G +KI DFG ++ V +
Sbjct: 121 YLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVP-----------------DVTYXL 163
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
GT Y++PE V ++ Y + D WS G+++ E L G+ P
Sbjct: 164 CGTPDYIAPEVVSTK----PYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/291 (28%), Positives = 135/291 (46%), Gaps = 31/291 (10%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA--HEAEILKRLDSQFI 107
+++ LG G G V + + + + A+K++ +S T + A E +LK+LD I
Sbjct: 7 QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNI 66
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+K + F+ + VME G LFD + +R+K SE + + +VL G YLH I
Sbjct: 67 MKLYE-FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNI 125
Query: 168 IHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
+H D+KP NLL+ K +KI DFG+S E +G +GT
Sbjct: 126 VHRDLKPENLLLESKSRDALIKIVDFGLSAHFE---------------VGGKMKERLGTA 170
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGE 284
Y++PE + + Y DVWS GV++ L G+ P FG + D L
Sbjct: 171 YYIAPEVLRKK-----YDEKCDVWSCGVILYILLCGYPP---FGGQTDQEILKRVEKGKF 222
Query: 285 RLEMPE--TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIE 333
+ P+ S E ++ V+ L + KR + EE L +P++ K S + +
Sbjct: 223 SFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQKHTD 273
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 97.4 bits (241), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 86/294 (29%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 44 ENISD-LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA--HEAEILK 100
+ +SD +++ LG G G V + + + + A+K++ +S T + A E +LK
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLK 76
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQ 160
+LD I+K + F+ + VME G LFD + +R+K SE + + +VL G
Sbjct: 77 QLDHPNIMKLYE-FFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMKQVLSGTT 135
Query: 161 YLHGMQIIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
YLH I+H D+KP NLL+ K +KI DFG+S E +G
Sbjct: 136 YLHKHNIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFE---------------VGGKM 180
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
+GT Y++PE + + Y DVWS GV++ L G+ P FG + D L
Sbjct: 181 KERLGTAYYIAPEVLRKK-----YDEKCDVWSCGVILYILLCGYPP---FGGQTDQEILK 232
Query: 278 CAICFGERLEMPE--TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSS 329
+ P+ S E ++ V+ L + KR + EE L +P++ K S
Sbjct: 233 RVEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWIVKFCSQ 286
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 140/300 (46%), Gaps = 42/300 (14%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
SDL+++ GHG+ G VY R +++ + A+K ++ + + +I+K + +
Sbjct: 56 FSDLREI---GHGSFGAVYFARDVRNSEVVAIKKMSYSG----KQSNEKWQDIIKEV--R 106
Query: 106 FIVKCHAVFYTIEGEICFVMEH-----MER--GSLFDSLRVRKK-LSEDVISGVAYRVLK 157
F+ K TI+ C++ EH ME GS D L V KK L E I+ V + L+
Sbjct: 107 FLQKLRHP-NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ 165
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
GL YLH +IH D+K N+L++ G VK+ DFG + I+ A
Sbjct: 166 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------------------APA 207
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
+GT +M+PE + + G Y DVWSLG+ +E PL + M+ +
Sbjct: 208 NXFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERKPPLFNM----NAMSAL 262
Query: 278 CAICFGERLEMPETASPE-FRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
I E + E FR FV SCL+K + R T E LL + FV + + I LI
Sbjct: 263 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLI 322
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 127/283 (44%), Gaps = 36/283 (12%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN-TTSSTIIRHQAAHEAEILKRLDSQFIVKCHAV 113
LG G IVY+ + + + YALKVL T I+R E +L RL I+K +
Sbjct: 61 LGRGATSIVYRCKQKGTQKPYALKVLKKTVDKKIVRT----EIGVLLRLSHPNIIKLKEI 116
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
F T EI V+E + G LFD + + SE + ++L+ + YLH I+H D+K
Sbjct: 117 FET-PTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLK 175
Query: 174 PSNLLING---KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL +KIADFG+S+IVE GT Y +PE
Sbjct: 176 PENLLYATPAPDAPLKIADFGLSKIVEHQVLMK---------------TVCGTPGYCAPE 220
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA----LICAICFGERL 286
+ G YG D+WS+G++ L G P + E+ D L C F
Sbjct: 221 ILR----GCAYGPEVDMWSVGIITYILLCGFEPF--YDERGDQFMFRRILNCEYYFIS-- 272
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSS 329
+ S + VR + D +KR T + L +P+VT ++++
Sbjct: 273 PWWDEVSLNAKDLVRKLIVLDPKKRLTTFQALQHPWVTGKAAN 315
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 92/300 (30%), Positives = 140/300 (46%), Gaps = 42/300 (14%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
SDL+++ GHG+ G VY R +++ + A+K ++ + + +I+K + +
Sbjct: 17 FSDLREI---GHGSFGAVYFARDVRNSEVVAIKKMSYSG----KQSNEKWQDIIKEV--R 67
Query: 106 FIVKCHAVFYTIEGEICFVMEH-----MER--GSLFDSLRVRKK-LSEDVISGVAYRVLK 157
F+ K TI+ C++ EH ME GS D L V KK L E I+ V + L+
Sbjct: 68 FLQKLRHP-NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ 126
Query: 158 GLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
GL YLH +IH D+K N+L++ G VK+ DFG + I+ A
Sbjct: 127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIM------------------APA 168
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
+GT +M+PE + + G Y DVWSLG+ +E PL + M+ +
Sbjct: 169 NXFVGTPYWMAPEVILAMD-EGQYDGKVDVWSLGITCIELAERKPPLFNM----NAMSAL 223
Query: 278 CAICFGERLEMPETASPE-FRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
I E + E FR FV SCL+K + R T E LL + FV + + I LI
Sbjct: 224 YHIAQNESPALQSGHWSEYFRNFVDSCLQKIPQDRPTSEVLLKHRFVLRERPPTVIMDLI 283
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 91/306 (29%), Positives = 138/306 (45%), Gaps = 63/306 (20%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH------------------------ 90
+G G+ G+V ++ N+ YA+KVL + +IR
Sbjct: 21 IGKGSYGVVKLAYNENDNTYYAMKVL--SKKKLIRQAGFPRRPPPRGTRPAPGGCIQPRG 78
Query: 91 ---QAAHEAEILKRLDSQFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSED 146
Q E ILK+LD +VK V E + V E + +G + + + K LSED
Sbjct: 79 PIEQVYQEIAILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVME-VPTLKPLSED 137
Query: 147 VISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXX 206
++KG++YLH +IIH DIKPSNLL+ G +KIADFGVS +
Sbjct: 138 QARFYFQDLIKGIEYLHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFK--------- 188
Query: 207 XXXXXXIGEAAI--ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
G A+ +GT A+M+PE + SE G A DVW++G V L C V
Sbjct: 189 -------GSDALLSNTVGTPAFMAPESL-SETRKIFSGKALDVWAMG-VTLYCFV----- 234
Query: 265 IGFGEKPDLMALICAI---CFGERLEMPETA--SPEFRRFVRSCLEKDWRKRGTVEELLA 319
FG+ P + I + + LE P+ + + + + L+K+ R V E+
Sbjct: 235 --FGQCPFMDERIMCLHSKIKSQALEFPDQPDIAEDLKDLITRMLDKNPESRIVVPEIKL 292
Query: 320 YPFVTK 325
+P+VT+
Sbjct: 293 HPWVTR 298
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 134/289 (46%), Gaps = 29/289 (10%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L LG G G+V++ + + ++ K +NT + ++ +E I+ +L ++ H
Sbjct: 56 LEELGSGAFGVVHRCVEKATGRVFVAKFINTPYP-LDKYTVKNEISIMNQLHHPKLINLH 114
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
F + E+ ++E + G LFD + K+SE + + +GL+++H I+H
Sbjct: 115 DAFED-KYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQACEGLKHMHEHSIVHL 173
Query: 171 DIKPSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
DIKP N++ K VKI DFG++ + E T + +
Sbjct: 174 DIKPENIMCETKKASSVKIIDFGLATKLNP---------------DEIVKVTTATAEFAA 218
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI-CAICFGERLE 287
PE VD E GF D+W++GV+ L G P G + L + C F E +
Sbjct: 219 PEIVDRE----PVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDE--D 272
Query: 288 MPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
+ SPE + F+++ L+K+ RKR TV + L +P++ + SN+ I
Sbjct: 273 AFSSVSPEAKDFIKNLLQKEPRKRLTVHDALEHPWL--KGDHSNLTSRI 319
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 121/287 (42%), Gaps = 28/287 (9%)
Query: 38 PTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AA 93
P P + D K +LG G+ V R ++ YA+K+L II+
Sbjct: 1 PPQPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVT 58
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY 153
E +++ RLD F VK + F E ++ F + + + G L +R E
Sbjct: 59 RERDVMSRLDHPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTA 117
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
++ L+YLHG IIH D+KP N+L+N ++I DFG ++++
Sbjct: 118 EIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR--------- 168
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL 273
A +GT Y+SPE + +E+ + D+W+LG ++ + + G P E
Sbjct: 169 ---ANXFVGTAQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE---- 217
Query: 274 MALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
LI + PE P+ R V L D KR EE+ Y
Sbjct: 218 -YLIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 263
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 90
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 91 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 197
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI A
Sbjct: 198 AQYVSPELL-TEKSAXK---SSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFAKIIK 248
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 95.1 bits (235), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 117/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 90
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 91 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 197
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + + + D+W+LG ++ + + G P E LI A
Sbjct: 198 AQYVSPELLTEKSACK----SSDLWALGCIIYQLVAGLPPFRAGNE-----GLIFAKIIK 248
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 95.1 bits (235), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 80/285 (28%), Positives = 134/285 (47%), Gaps = 30/285 (10%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTS-STIIRHQAAHEAEILKRLDSQFIV 108
+++ LG G G V R + ++ A+K++ TS ST + E +LK LD I+
Sbjct: 40 QRVKKLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIM 99
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
K + F+ + VME + G LFD + R K +E + + +VL G+ YLH I+
Sbjct: 100 KLYD-FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 169 HGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+KP NLL+ K + +KI DFG+S + E + +GT
Sbjct: 159 HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKER---------------LGTAY 203
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
Y++PE + + Y DVWS+GV++ L G+ P FG + D L
Sbjct: 204 YIAPEVLRKK-----YDEKCDVWSIGVILFILLAGYPP---FGGQTDQEILRKVEKGKYT 255
Query: 286 LEMPE--TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSS 328
+ PE S + ++ L+ D ++R + ++ L +P++ + S
Sbjct: 256 FDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWIKEMCS 300
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 131/282 (46%), Gaps = 24/282 (8%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G +V + + YA K++NT + HQ EA I + L IV+ H
Sbjct: 12 IGKGAFSVVRRCVKLCTGHEYAAKIINTKKLSARDHQKLEREARICRLLKHSNIVRLHDS 71
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
+ EG V + + G LF+ + R+ SE S ++L+ + + H M ++H D+K
Sbjct: 72 I-SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLK 130
Query: 174 PSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K VK+ADFG++ V+ + +A GT Y+SPE
Sbjct: 131 PENLLLASKCKGAAVKLADFGLAIEVQGDQ--------------QAWFGFAGTPGYLSPE 176
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ E YG D+W+ GV++ LVG YP ++ L I A + +
Sbjct: 177 VLRKEA----YGKPVDIWACGVILYILLVG-YPPFWDEDQHKLYQQIKAGAYDFPSPEWD 231
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNI 332
T +PE + + L + KR T E L +P+V +RS+ +++
Sbjct: 232 TVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASM 273
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 94.7 bits (234), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 130/275 (47%), Gaps = 37/275 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-----EAEILKRLDSQFIVK 109
LG G+ G V H K+ ALK + S +++ H E LK L I+K
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFI---SRQLLKKSDMHMRVEREISYLKLLRHPHIIK 73
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIH 169
+ V T +I V+E+ G LFD + +K+++ED +++ ++Y H +I+H
Sbjct: 74 LYDVI-TTPTDIVMVIEYAG-GELFDYIVEKKRMTEDEGRRFFQQIICAIEYCHRHKIVH 131
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
D+KP NLL++ VKIADFG+S I+ + G G+ Y +P
Sbjct: 132 RDLKPENLLLDDNLNVKIADFGLSNIMTD---------------GNFLKTSCGSPNYAAP 176
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK--PDLMALICAICFGERLE 287
E ++ + + G DVWS G+V+ LVG P F ++ P+L + + +
Sbjct: 177 EVINGKLYAGP---EVDVWSCGIVLYVMLVGRLP---FDDEFIPNLFKKVNSCVYV---- 226
Query: 288 MPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPF 322
MP+ SP + +R + D +R T++E+ P+
Sbjct: 227 MPDFLSPGAQSLIRRMIVADPMQRITIQEIRRDPW 261
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 40/301 (13%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
N D + V+G G +V A+K +N + E + + +
Sbjct: 8 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH 67
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLR--VRKK------LSEDVISGVAYRVL 156
IV + F ++ E+ VM+ + GS+ D ++ V K L E I+ + VL
Sbjct: 68 PNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 126
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV----EETRXXXXXXXXXXXX 212
+GL+YLH IH D+K N+L+ G V+IADFGVS + + TR
Sbjct: 127 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR------------ 174
Query: 213 IGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPD 272
+ +GT +M+PE ++ R Y F D+WS G+ +E G P + + P
Sbjct: 175 -NKVRKTFVGTPCWMAPEVMEQVR---GYDFKADIWSFGITAIELATGAAP---YHKYPP 227
Query: 273 LMALICAICFG--------ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+ L+ + + EM + FR+ + CL+KD KR T ELL + F
Sbjct: 228 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 287
Query: 325 K 325
K
Sbjct: 288 K 288
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 119/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 88
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 89 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A A +GT
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANAFVGT 195
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 196 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 246
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 283
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 129/301 (42%), Gaps = 40/301 (13%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
N D + V+G G +V A+K +N + E + + +
Sbjct: 13 NRDDYELQEVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHH 72
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLR--VRKK------LSEDVISGVAYRVL 156
IV + F ++ E+ VM+ + GS+ D ++ V K L E I+ + VL
Sbjct: 73 PNIVSYYTSF-VVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVL 131
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV----EETRXXXXXXXXXXXX 212
+GL+YLH IH D+K N+L+ G V+IADFGVS + + TR
Sbjct: 132 EGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITR------------ 179
Query: 213 IGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPD 272
+ +GT +M+PE ++ R Y F D+WS G+ +E G P + + P
Sbjct: 180 -NKVRKTFVGTPCWMAPEVMEQVR---GYDFKADIWSFGITAIELATGAAP---YHKYPP 232
Query: 273 LMALICAICFG--------ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+ L+ + + EM + FR+ + CL+KD KR T ELL + F
Sbjct: 233 MKVLMLTLQNDPPSLETGVQDKEMLKKYGKSFRKMISLCLQKDPEKRPTAAELLRHKFFQ 292
Query: 325 K 325
K
Sbjct: 293 K 293
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/280 (26%), Positives = 129/280 (46%), Gaps = 28/280 (10%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTS-STIIRHQAAHEAEILKRLDSQFIVK 109
+L +G G+ G V+ + Y +K +N + S+ R ++ E +L + IV+
Sbjct: 28 RLQKIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQ 87
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKL--SEDVISGVAYRVLKGLQYLHGMQI 167
F G + VM++ E G LF + +K + ED I ++ L+++H +I
Sbjct: 88 YRESFEE-NGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKI 146
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H DIK N+ + G V++ DFG++R++ T E A AC+GT Y+
Sbjct: 147 LHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV--------------ELARACIGTPYYL 192
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAICFGERL 286
SPE +++ Y D+W+LG V+ E C + H F E + L+ I G
Sbjct: 193 SPEICENK----PYNNKSDIWALGCVLYELCTLKH----AF-EAGSMKNLVLKIISGSFP 243
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
+ S + R V +++ R R +V +L F+ KR
Sbjct: 244 PVSLHYSYDLRSLVSQLFKRNPRDRPSVNSILEKGFIAKR 283
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 94.4 bits (233), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 90
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 91 HPFFVKLYFTFQDDE-KLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A + +GT
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANSFVGT 197
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 198 AQYVSPELL-TEKSASK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 248
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 24/281 (8%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
LG G +V + + YA K++NT + HQ EA I + L IV+ H
Sbjct: 30 LGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 89
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
+ EG + + + G LF+ + R+ SE S ++L+ + + H M ++H D+K
Sbjct: 90 I-SEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRDLK 148
Query: 174 PSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K VK+ADFG++ VE + +A GT Y+SPE
Sbjct: 149 PENLLLASKLKGAAVKLADFGLAIEVEGEQ--------------QAWFGFAGTPGYLSPE 194
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + YG D+W+ GV++ LVG YP ++ L I A + +
Sbjct: 195 VLRKD----PYGKPVDLWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWD 249
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
T +PE + + L + KR T E L +P+++ RS+ ++
Sbjct: 250 TVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVAS 290
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 129/275 (46%), Gaps = 31/275 (11%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
+G G+ GIV R + S A+K+++ R + ++ R F V
Sbjct: 53 IGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQ--RRELLFNEVVIMRDYQHFNVVEMYKS 110
Query: 115 YTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKP 174
Y + E+ +ME ++ G+L D + + +L+E+ I+ V VL+ L YLH +IH DIK
Sbjct: 111 YLVGEELWVLMEFLQGGALTDIVS-QVRLNEEQIATVCEAVLQALAYLHAQGVIHRDIKS 169
Query: 175 SNLLINGKGEVKIADFG----VSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
++L+ G VK++DFG +S+ V + + +GT +M+PE
Sbjct: 170 DSILLTLDGRVKLSDFGFCAQISKDVPKRK------------------XLVGTPYWMAPE 211
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + + D+WSLG++V+E + G P F + P +L+
Sbjct: 212 VISRSLYATEV----DIWSLGIMVIEMVDGEPPY--FSDSPVQAMKRLRDSPPPKLKNSH 265
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
SP R F+ L +D ++R T +ELL +PF+ +
Sbjct: 266 KVSPVLRDFLERMLVRDPQERATAQELLDHPFLLQ 300
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA---HEAEILKRLDS 104
D + + V+G G G V VRH+ + +YA+K+L + I R +A E +I+ +S
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 105 QFIVKCHAVFYTIEGE--ICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
++V+ +FY + + + VME+M G L +L + E V+ L +
Sbjct: 134 PWVVQ---LFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC-- 220
H M IH D+KP N+L++ G +K+ADFG + + E + C
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK----------------EGMVRCDT 233
Query: 221 -MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
+GT Y+SPE + S+ G YG D WS+GV + E LVG P
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA---HEAEILKRLDS 104
D + + V+G G G V VRH+ + +YA+K+L + I R +A E +I+ +S
Sbjct: 70 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERDIMAFANS 128
Query: 105 QFIVKCHAVFYTIEGE--ICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
++V+ +FY + + + VME+M G L +L + E V+ L +
Sbjct: 129 PWVVQ---LFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAI 184
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC-- 220
H M IH D+KP N+L++ G +K+ADFG + + E + C
Sbjct: 185 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK----------------EGMVRCDT 228
Query: 221 -MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
+GT Y+SPE + S+ G YG D WS+GV + E LVG P
Sbjct: 229 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 109/225 (48%), Gaps = 29/225 (12%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA---HEAEILKRLDS 104
D + + V+G G G V VRH+ + +YA+K+L + I R +A E +I+ +S
Sbjct: 75 DYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLL-SKFEMIKRSDSAFFWEERDIMAFANS 133
Query: 105 QFIVKCHAVFYTIEGE--ICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
++V+ +FY + + + VME+M G L +L + E V+ L +
Sbjct: 134 PWVVQ---LFYAFQDDRYLYMVMEYMPGGDLV-NLMSNYDVPEKWARFYTAEVVLALDAI 189
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC-- 220
H M IH D+KP N+L++ G +K+ADFG + + E + C
Sbjct: 190 HSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNK----------------EGMVRCDT 233
Query: 221 -MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
+GT Y+SPE + S+ G YG D WS+GV + E LVG P
Sbjct: 234 AVGTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH--IIKENKVPYVTRERDVMSRLD 91
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 92 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A + +GT
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANSFVGT 198
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 199 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 249
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 250 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 286
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 28/285 (9%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHE 95
P + D K +LG G+ V R ++ YA+K+L II+ E
Sbjct: 2 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRE 59
Query: 96 AEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRV 155
+++ RLD F VK + F E ++ F + + + G L +R E +
Sbjct: 60 RDVMSRLDHPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 118
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
+ L+YLHG IIH D+KP N+L+N ++I DFG ++++
Sbjct: 119 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR----------- 167
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA 275
A +GT Y+SPE + +E+ + D+W+LG ++ + + G P E
Sbjct: 168 -ANXFVGTAQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----Y 217
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
LI + PE P+ R V L D KR EE+ Y
Sbjct: 218 LIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 262
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 119/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 87
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 88 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A + +GT
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANSFVGT 194
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 195 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 245
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 246 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 282
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 120/284 (42%), Gaps = 28/284 (9%)
Query: 41 PDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEA 96
P + D K +LG G+ V R ++ YA+K+L II+ E
Sbjct: 1 PRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRER 58
Query: 97 EILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+++ RLD F VK + F E ++ F + + + G L +R E ++
Sbjct: 59 DVMSRLDHPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIV 117
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
L+YLHG IIH D+KP N+L+N ++I DFG ++++
Sbjct: 118 SALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ 165
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMAL 276
A +GT Y+SPE + +E+ + D+W+LG ++ + + G P E L
Sbjct: 166 ANXFVGTAQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YL 216
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
I + PE P+ R V L D KR EE+ Y
Sbjct: 217 IFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 260
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 120/285 (42%), Gaps = 28/285 (9%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHE 95
P + D K +LG G+ V R ++ YA+K+L II+ E
Sbjct: 1 QPRKKRPEDFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRE 58
Query: 96 AEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRV 155
+++ RLD F VK + F E ++ F + + + G L +R E +
Sbjct: 59 RDVMSRLDHPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
+ L+YLHG IIH D+KP N+L+N ++I DFG ++++
Sbjct: 118 VSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR----------- 166
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA 275
A +GT Y+SPE + +E+ + D+W+LG ++ + + G P E
Sbjct: 167 -ANXFVGTAQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----Y 216
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
LI + PE P+ R V L D KR EE+ Y
Sbjct: 217 LIFQKIIKLEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 261
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 88
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 89 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 195
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 196 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 246
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 283
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 31 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 88
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 89 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 195
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 196 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 246
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 283
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 90
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 91 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 197
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 198 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 248
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 90
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 91 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 197
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 198 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 248
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 92.8 bits (229), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 33 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 90
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 91 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 149
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 150 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 197
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 198 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 248
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 249 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 285
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 34 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 91
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 92 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 150
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 151 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 198
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 199 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 249
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 250 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 286
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 30 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 87
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 88 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 146
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 147 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 194
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 195 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 245
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 246 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 282
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 118/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 15 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 72
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 73 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 131
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 132 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 179
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 180 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 230
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 231 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 267
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 132/273 (48%), Gaps = 30/273 (10%)
Query: 58 GNGGIVYKVR---HQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
G GG KV+ H + + A+K++ NT S + R + E E LK L Q I + +
Sbjct: 19 GTGGFA-KVKLACHILTGEMVAIKIMDKNTLGSDLPRIKT--EIEALKNLRHQHICQLYH 75
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
V T +I V+E+ G LFD + + +LSE+ V +++ + Y+H H D+
Sbjct: 76 VLET-ANKIFMVLEYCPGGELFDYIISQDRLSEEETRVVFRQIVSAVAYVHSQGYAHRDL 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP NLL + ++K+ DFG+ + + C G+ AY +PE +
Sbjct: 135 KPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQ-------------TCCGSLAYAAPELI 181
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ + G DVWS+G+++ + G P + ++MAL I G + ++P+
Sbjct: 182 QGKSYLGS---EADVWSMGILLYVLMCGFLPF----DDDNVMALYKKIMRG-KYDVPKWL 233
Query: 293 SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
SP ++ L+ D +KR +++ LL +P++ +
Sbjct: 234 SPSSILLLQQMLQVDPKKRISMKNLLNHPWIMQ 266
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 116/277 (41%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 38 DFKFGKILGEGSFSTVVLARELATSREYAIKILEKRH--IIKENKVPYVTRERDVMSRLD 95
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 96 HPFFVKLYFCFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 154
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 155 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 202
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + + + D+W+LG ++ + + G P E LI
Sbjct: 203 AQYVSPELLTEKSACK----SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 253
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 254 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 290
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 24/282 (8%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
LG G +V + + YA K++NT + HQ EA I + L IV+ H
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
+ EG V + + G LF+ + R+ SE S ++L+ + + H I+H D+K
Sbjct: 72 I-SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLK 130
Query: 174 PSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K + VK+ADFG++ V+ + +A GT Y+SPE
Sbjct: 131 PENLLLASKSKGAAVKLADFGLAIEVQGDQ--------------QAWFGFAGTPGYLSPE 176
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + YG D+W+ GV++ LVG YP ++ L I A + +
Sbjct: 177 VLRKD----PYGKPVDMWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWD 231
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNI 332
T +PE + + L + KR T E L +P++ +RS+ +++
Sbjct: 232 TVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASM 273
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 79/282 (28%), Positives = 131/282 (46%), Gaps = 24/282 (8%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
LG G +V + + YA K++NT + HQ EA I + L IV+ H
Sbjct: 12 LGKGAFSVVRRCMKIPTGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 71
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
+ EG V + + G LF+ + R+ SE S ++L+ + + H I+H D+K
Sbjct: 72 I-SEEGFHYLVFDLVTGGELFEDIVAREYYSEADASHCIQQILESVNHCHLNGIVHRDLK 130
Query: 174 PSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K + VK+ADFG++ V+ + +A GT Y+SPE
Sbjct: 131 PENLLLASKSKGAAVKLADFGLAIEVQGDQ--------------QAWFGFAGTPGYLSPE 176
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + YG D+W+ GV++ LVG YP ++ L I A + +
Sbjct: 177 VLRKD----PYGKPVDMWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWD 231
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNI 332
T +PE + + L + KR T E L +P++ +RS+ +++
Sbjct: 232 TVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASM 273
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 95/222 (42%), Gaps = 23/222 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKRL 102
I D + LG G G VY R +++ I ALKVL + + HQ E EI L
Sbjct: 12 TIDDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
I++ + F+ I ++E RG L+ L+ + E + + L Y
Sbjct: 72 RHPNILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H ++IH DIKP NLL+ KGE+KIADFG S R G
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR----------------XMCG 174
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
T Y+ PE ++ G + D+W GV+ E LVG P
Sbjct: 175 TLDYLPPEMIE----GKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
LG G +V + H+ + +A K++NT + Q EA I ++L IV+ H
Sbjct: 37 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 96
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
E V + + G LF+ + R+ SE S ++L+ + Y H I+H ++K
Sbjct: 97 IQE-ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 155
Query: 174 PSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K + VK+ADFG++ V ++ EA GT Y+SPE
Sbjct: 156 PENLLLASKAKGAAVKLADFGLAIEVNDS---------------EAWHGFAGTPGYLSPE 200
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + Y D+W+ GV++ LVG YP ++ L A I A + +
Sbjct: 201 VLKKD----PYSKPVDIWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWD 255
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
T +PE + + S L + +KR T ++ L P++ R
Sbjct: 256 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 291
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ R ++ YA+K+L II+ E +++ RLD
Sbjct: 31 DFKFGKILGEGSFSTTVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 88
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 89 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 147
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 148 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 195
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 196 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 246
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ PE P+ R V L D KR EE+ Y
Sbjct: 247 LEYDFPEKFFPKARDLVEKLLVLDATKRLGCEEMEGY 283
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
LG G +V + H+ + +A K++NT + Q EA I ++L IV+ H
Sbjct: 13 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 72
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
E V + + G LF+ + R+ SE S ++L+ + Y H I+H ++K
Sbjct: 73 IQE-ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 131
Query: 174 PSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K + VK+ADFG++ V ++ EA GT Y+SPE
Sbjct: 132 PENLLLASKAKGAAVKLADFGLAIEVNDS---------------EAWHGFAGTPGYLSPE 176
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + Y D+W+ GV++ LVG YP ++ L A I A + +
Sbjct: 177 VLKKD----PYSKPVDIWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWD 231
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
T +PE + + S L + +KR T ++ L P++ R
Sbjct: 232 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 267
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 78/292 (26%), Positives = 131/292 (44%), Gaps = 31/292 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
L +G G+ GIV + + A+K ++ R +E I++ +V
Sbjct: 47 LANFIKIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQR-RELLFNEVVIMRDYHHDNVV 105
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
++ Y + E+ VME +E G+L D + +++E+ I+ V VL+ L YLH +I
Sbjct: 106 DMYSS-YLVGDELWVVMEFLEGGALTD-IVTHTRMNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 169 HGDIKPSNLLINGKGEVKIADFG----VSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
H DIK ++L+ G +K++DFG VS+ V + + +GT
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRK------------------XLVGTP 205
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGE 284
+M+PE + YG D+WSLG++V+E + G P F E P
Sbjct: 206 YWMAPEVISRL----PYGTEVDIWSLGIMVIEMIDGEPPY--FNEPPLQAMRRIRDSLPP 259
Query: 285 RLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSNIEGLI 336
R++ S R F+ L ++ +R T +ELL +PF+ S I L+
Sbjct: 260 RVKDLHKVSSVLRGFLDLMLVREPSQRATAQELLGHPFLKLAGPPSCIVPLM 311
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 91.3 bits (225), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
LG G +V + H+ + +A K++NT + Q EA I ++L IV+ H
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
E V + + G LF+ + R+ SE S ++L+ + Y H I+H ++K
Sbjct: 74 IQE-ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 132
Query: 174 PSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K + VK+ADFG++ V ++ EA GT Y+SPE
Sbjct: 133 PENLLLASKAKGAAVKLADFGLAIEVNDS---------------EAWHGFAGTPGYLSPE 177
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + Y D+W+ GV++ LVG YP ++ L A I A + +
Sbjct: 178 VLKKD----PYSKPVDIWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWD 232
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
T +PE + + S L + +KR T ++ L P++ R
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 268
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 127/276 (46%), Gaps = 25/276 (9%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
LG G +V + H+ + +A K++NT + Q EA I ++L IV+ H
Sbjct: 14 LGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDS 73
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
E V + + G LF+ + R+ SE S ++L+ + Y H I+H ++K
Sbjct: 74 IQE-ESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQILESIAYCHSNGIVHRNLK 132
Query: 174 PSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K + VK+ADFG++ V ++ EA GT Y+SPE
Sbjct: 133 PENLLLASKAKGAAVKLADFGLAIEVNDS---------------EAWHGFAGTPGYLSPE 177
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + Y D+W+ GV++ LVG YP ++ L A I A + +
Sbjct: 178 VLKKD----PYSKPVDIWACGVILYILLVG-YPPFWDEDQHRLYAQIKAGAYDYPSPEWD 232
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
T +PE + + S L + +KR T ++ L P++ R
Sbjct: 233 TVTPEAKSLIDSMLTVNPKKRITADQALKVPWICNR 268
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 28/277 (10%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ----AAHEAEILKRLD 103
D K +LG G+ V R ++ YA+K+L II+ E +++ RLD
Sbjct: 36 DFKFGKILGEGSFSTVVLARELATSREYAIKILE--KRHIIKENKVPYVTRERDVMSRLD 93
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
F VK + F E ++ F + + + G L +R E ++ L+YLH
Sbjct: 94 HPFFVKLYFTFQDDE-KLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLH 152
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
G IIH D+KP N+L+N ++I DFG ++++ A +GT
Sbjct: 153 GKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQAR------------ANXFVGT 200
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y+SPE + +E+ + D+W+LG ++ + + G P E LI
Sbjct: 201 AQYVSPELL-TEKSACK---SSDLWALGCIIYQLVAGLPPFRAGNE-----YLIFQKIIK 251
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ P P+ R V L D KR EE+ Y
Sbjct: 252 LEYDFPAAFFPKARDLVEKLLVLDATKRLGCEEMEGY 288
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 24/281 (8%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
LG G +V + + YA ++NT + HQ EA I + L IV+ H
Sbjct: 19 LGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDS 78
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
+ EG + + + G LF+ + R+ SE S ++L+ + + H M ++H ++K
Sbjct: 79 I-SEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQILEAVLHCHQMGVVHRNLK 137
Query: 174 PSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
P NLL+ K VK+ADFG++ VE + +A GT Y+SPE
Sbjct: 138 PENLLLASKLKGAAVKLADFGLAIEVEGEQ--------------QAWFGFAGTPGYLSPE 183
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + YG D+W+ GV++ LVG YP ++ L I A + +
Sbjct: 184 VLRKD----PYGKPVDLWACGVILYILLVG-YPPFWDEDQHRLYQQIKAGAYDFPSPEWD 238
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
T +PE + + L + KR T E L +P+++ RS+ ++
Sbjct: 239 TVTPEAKDLINKMLTINPSKRITAAEALKHPWISHRSTVAS 279
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ--AAHEAEILKRL 102
++D ++G G G VY R + +YA+K L+ + + + A +E +L +
Sbjct: 186 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 245
Query: 103 ---DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
D FIV F+T + ++ F+++ M G L L SE + A ++ GL
Sbjct: 246 STGDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 304
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+++H +++ D+KP+N+L++ G V+I+D G++ + + A
Sbjct: 305 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----------------A 348
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
+GT YM+PE + G Y + D +SLG ++ + L GH P K D M
Sbjct: 349 SVGTHGYMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 405
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
L A+ E+P++ SPE R + L++D +R
Sbjct: 406 LTMAV------ELPDSFSPELRSLLEGLLQRDVNRR 435
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ--AAHEAEILKRL 102
++D ++G G G VY R + +YA+K L+ + + + A +E +L +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 103 ---DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
D FIV F+T + ++ F+++ M G L L SE + A ++ GL
Sbjct: 247 STGDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+++H +++ D+KP+N+L++ G V+I+D G++ + + A
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----------------A 349
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
+GT YM+PE + G Y + D +SLG ++ + L GH P K D M
Sbjct: 350 SVGTHGYMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
L A+ E+P++ SPE R + L++D +R
Sbjct: 407 LTMAV------ELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 39/284 (13%)
Query: 52 LTVLGHGNGGIVYKVRH---QKSNSIYALKVLNTTSSTIIRH--QAAH---EAEILKRLD 103
L VLG G G V++VR + I+A+KVL + I+R+ AH E IL+ +
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK--KAMIVRNAKDTAHTKAERNILEEVK 79
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
FIV F T G++ ++E++ G LF L ED + L +LH
Sbjct: 80 HPFIVDLIYAFQT-GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
II+ D+KP N+++N +G VK+ DFG+ + G GT
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--------------ESIHDGTVTHTFCGT 184
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
YM+PE + R G + A D WSLG ++ + L G P G K + ++
Sbjct: 185 IEYMAPEIL--MRSG--HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---- 236
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKR-----GTVEELLAYPF 322
+L +P + E R ++ L+++ R G E+ A+PF
Sbjct: 237 -KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ--AAHEAEILKRL 102
++D ++G G G VY R + +YA+K L+ + + + A +E +L +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 103 ---DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
D FIV F+T + ++ F+++ M G L L SE + A ++ GL
Sbjct: 247 STGDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+++H +++ D+KP+N+L++ G V+I+D G++ + + A
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----------------A 349
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
+GT YM+PE + G Y + D +SLG ++ + L GH P K D M
Sbjct: 350 SVGTHGYMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
L A+ E+P++ SPE R + L++D +R
Sbjct: 407 LTMAV------ELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/276 (26%), Positives = 129/276 (46%), Gaps = 35/276 (12%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ--AAHEAEILKRL 102
++D ++G G G VY R + +YA+K L+ + + + A +E +L +
Sbjct: 187 TMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLV 246
Query: 103 ---DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
D FIV F+T + ++ F+++ M G L L SE + A ++ GL
Sbjct: 247 STGDCPFIVCMSYAFHTPD-KLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGL 305
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+++H +++ D+KP+N+L++ G V+I+D G++ + + A
Sbjct: 306 EHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPH----------------A 349
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
+GT YM+PE + G Y + D +SLG ++ + L GH P K D M
Sbjct: 350 SVGTHGYMAPEVLQK---GVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT 406
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
L A+ E+P++ SPE R + L++D +R
Sbjct: 407 LTMAV------ELPDSFSPELRSLLEGLLQRDVNRR 436
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 72/266 (27%), Positives = 117/266 (43%), Gaps = 26/266 (9%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCH 111
LG G G V +H+ + A+K+LN S + + E + LK I+K +
Sbjct: 23 TLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLY 82
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
V T +I VME++ G LFD + +L E + ++L G+ Y H ++H D
Sbjct: 83 QVIST-PSDIFMVMEYVSGGELFDYICKNGRLDEKESRRLFQQILSGVDYCHRHMVVHRD 141
Query: 172 IKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPER 231
+KP N+L++ KIADFG+S ++ + GE G+ Y +PE
Sbjct: 142 LKPENVLLDAHMNAKIADFGLSNMMSD---------------GEFLRXSCGSPNYAAPEV 186
Query: 232 VDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
+ + G D+WS GV++ L G P P L IC F P+
Sbjct: 187 ISGRLYAGP---EVDIWSSGVILYALLCGTLPFDD-DHVPTLFKKICDGIF----YTPQY 238
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEEL 317
+P ++ L+ D KR T++++
Sbjct: 239 LNPSVISLLKHMLQVDPMKRATIKDI 264
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 30/287 (10%)
Query: 36 SNPTSPDVE-NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTT---SSTIIRHQ 91
++ TS D + +I + + L +G GN V RH + A+K+++ T SS++ +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--QK 59
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV 151
E I+K L+ IVK V T E + VME+ G +FD L ++ E
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++ +QY H I+H D+K NLL++ +KIADFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---------------EF 163
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
G A G Y +PE +++ G DVWSLGV++ + G P G
Sbjct: 164 TFGNKLDAFCGAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----Q 216
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+L L + G + +P S + ++ L + KRGT+E+++
Sbjct: 217 NLKELRERVLRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/281 (26%), Positives = 121/281 (43%), Gaps = 31/281 (11%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTS---STIIRH 90
P+SNP + SD L V+G G+ G V RH+ YA+KVL + +H
Sbjct: 29 PSSNPHA----KPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKH 84
Query: 91 QAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISG 150
+ +LK + F+V H F T + ++ FV++++ G LF L+ + E
Sbjct: 85 IMSERNVLLKNVKHPFLVGLHFSFQTAD-KLYFVLDYINGGELFYHLQRERCFLEPRARF 143
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
A + L YLH + I++ D+KP N+L++ +G + + DFG+ + E
Sbjct: 144 YAAEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHN---------- 193
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
+ C GT Y++PE + + Y D W LG V+ E L G P
Sbjct: 194 ---STTSTFC-GTPEYLAPEVLHKQ----PYDRTVDWWCLGAVLYEMLYGLPPFYSRN-- 243
Query: 271 PDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
A + + L++ + R + L+KD KR
Sbjct: 244 ---TAEMYDNILNKPLQLKPNITNSARHLLEGLLQKDRTKR 281
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 94/222 (42%), Gaps = 23/222 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKRL 102
I D LG G G VY R +++ I ALKVL + + HQ E EI L
Sbjct: 12 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 71
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
I++ + F+ I ++E RG L+ L+ + E + + L Y
Sbjct: 72 RHPNILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 130
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H ++IH DIKP NLL+ KGE+KIADFG S R G
Sbjct: 131 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR----------------XMCG 174
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
T Y+ PE ++ G + D+W GV+ E LVG P
Sbjct: 175 TLDYLPPEMIE----GKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 127/284 (44%), Gaps = 39/284 (13%)
Query: 52 LTVLGHGNGGIVYKVRH---QKSNSIYALKVLNTTSSTIIRH--QAAH---EAEILKRLD 103
L VLG G G V++VR + I+A+KVL + I+R+ AH E IL+ +
Sbjct: 22 LRVLGKGGYGKVFQVRKVTGANTGKIFAMKVLK--KAMIVRNAKDTAHTKAERNILEEVK 79
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
FIV F T G++ ++E++ G LF L ED + L +LH
Sbjct: 80 HPFIVDLIYAFQT-GGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALGHLH 138
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
II+ D+KP N+++N +G VK+ DFG+ + G GT
Sbjct: 139 QKGIIYRDLKPENIMLNHQGHVKLTDFGLCK--------------ESIHDGTVTHXFCGT 184
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
YM+PE + R G + A D WSLG ++ + L G P G K + ++
Sbjct: 185 IEYMAPEIL--MRSG--HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC---- 236
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKR-----GTVEELLAYPF 322
+L +P + E R ++ L+++ R G E+ A+PF
Sbjct: 237 -KLNLPPYLTQEARDLLKKLLKRNAASRLGAGPGDAGEVQAHPF 279
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 94/222 (42%), Gaps = 23/222 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKRL 102
I D LG G G VY R +++ I ALKVL + + HQ E EI L
Sbjct: 13 TIDDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHL 72
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
I++ + F+ I ++E RG L+ L+ + E + + L Y
Sbjct: 73 RHPNILRMYNYFHD-RKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFMEELADALHYC 131
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H ++IH DIKP NLL+ KGE+KIADFG S R G
Sbjct: 132 HERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRR----------------XMCG 175
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
T Y+ PE ++ G + D+W GV+ E LVG P
Sbjct: 176 TLDYLPPEMIE----GKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 18/224 (8%)
Query: 43 VENIS-DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
V NIS D + ++LG G G+V H+ + I A+K + + + E +ILK
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 102 LDSQFIVKCHAV----FYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRV 155
+ I+ + + E+ + E M+ D RV + LS+D I Y+
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT----DLHRVISTQMLSDDHIQYFIYQT 121
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
L+ ++ LHG +IH D+KPSNLLIN ++K+ DFG++RI++E+ + E
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ T Y +PE + + Y A DVWS G ++ E +
Sbjct: 182 X----VATRWYRAPEVMLT---SAKYSRAMDVWSCGCILAELFL 218
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/231 (28%), Positives = 107/231 (46%), Gaps = 26/231 (11%)
Query: 89 RHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK----LS 144
R E ++LK+L+ ++K +A F + E+ V+E + G L ++ KK +
Sbjct: 76 RADCIKEIDLLKQLNHPNVIKYYASFIE-DNELNIVLELADAGDLSRMIKHFKKQKRLIP 134
Query: 145 EDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXX 204
E + ++ L+++H +++H DIKP+N+ I G VK+ D G+ R
Sbjct: 135 ERTVWKYFVQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTT--- 191
Query: 205 XXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
AA + +GT YMSPER+ Y F D+WSLG ++ E P
Sbjct: 192 -----------AAHSLVGTPYYMSPERIHE----NGYNFKSDIWSLGCLLYEMAALQSPF 236
Query: 265 IGFGEKPDLMALICAICFGERLEMP-ETASPEFRRFVRSCLEKDWRKRGTV 314
+G+K +L +L I + +P + S E R+ V C+ D KR V
Sbjct: 237 --YGDKMNLYSLCKKIEQCDYPPLPSDHYSEELRQLVNMCINPDPEKRPDV 285
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 18/224 (8%)
Query: 43 VENIS-DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
V NIS D + ++LG G G+V H+ + I A+K + + + E +ILK
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 102 LDSQFIVKCHAV----FYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRV 155
+ I+ + + E+ + E M+ D RV + LS+D I Y+
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT----DLHRVISTQMLSDDHIQYFIYQT 121
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
L+ ++ LHG +IH D+KPSNLLIN ++K+ DFG++RI++E+ + E
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTE 181
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ T Y +PE + + Y A DVWS G ++ E +
Sbjct: 182 Y----VATRWYRAPEVMLT---SAKYSRAMDVWSCGCILAELFL 218
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 30/287 (10%)
Query: 36 SNPTSPDVE-NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTT---SSTIIRHQ 91
++ TS D + +I + + L +G GN V RH + A+K+++ T SS++ +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--QK 59
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV 151
E I+K L+ IVK V T E + VME+ G +FD L ++ E
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++ +QY H I+H D+K NLL++ +KIADFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---------------EF 163
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
G G+ Y +PE +++ G DVWSLGV++ + G P G
Sbjct: 164 TFGNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----Q 216
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+L L + G + +P S + ++ L + KRGT+E+++
Sbjct: 217 NLKELRERVLRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 129/287 (44%), Gaps = 30/287 (10%)
Query: 36 SNPTSPDVE-NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTT---SSTIIRHQ 91
++ TS D + +I + + L +G GN V RH + A+K+++ T SS++ +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--QK 59
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV 151
E I+K L+ IVK V T E + VME+ G +FD L ++ E
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++ +QY H I+H D+K NLL++ +KIADFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---------------EF 163
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
G G+ Y +PE +++ G DVWSLGV++ + G P G
Sbjct: 164 TFGNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----Q 216
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+L L + G + +P S + ++ L + KRGT+E+++
Sbjct: 217 NLKELRERVLRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 67/283 (23%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-------IRHQAAHEAEILKRLDSQF 106
V+G G +V + H+ + +A+K++ T+ + +R E IL+++
Sbjct: 101 VIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILRQVAGHP 160
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+ Y + V + M +G LFD L + LSE + +L+ + +LH
Sbjct: 161 HIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIMRSLLEAVSFLHANN 220
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
I+H D+KP N+L++ +++++DFG S +E GE GT Y
Sbjct: 221 IVHRDLKPENILLDDNMQIRLSDFGFSCHLEP---------------GEKLRELCGTPGY 265
Query: 227 MSPE--RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGE 284
++PE + + YG D+W+ GV++ L G P F + ++ L +
Sbjct: 266 LAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPP---FWHRRQILMLRMIMEGQY 322
Query: 285 RLEMPE--TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ PE S + + L+ D R T E+ L +PF +
Sbjct: 323 QFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFFER 365
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 107/224 (47%), Gaps = 18/224 (8%)
Query: 43 VENIS-DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
V NIS D + ++LG G G+V H+ + I A+K + + + E +ILK
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKH 65
Query: 102 LDSQFIVKCHAV----FYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRV 155
+ I+ + + E+ + E M+ D RV + LS+D I Y+
Sbjct: 66 FKHENIITIFNIQRPDSFENFNEVYIIQELMQT----DLHRVISTQMLSDDHIQYFIYQT 121
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
L+ ++ LHG +IH D+KPSNLLIN ++K+ DFG++RI++E+ + E
Sbjct: 122 LRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVE 181
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ T Y +PE + + Y A DVWS G ++ E +
Sbjct: 182 ----FVATRWYRAPEVMLT---SAKYSRAMDVWSCGCILAELFL 218
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 79/296 (26%), Positives = 126/296 (42%), Gaps = 37/296 (12%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH------------QAAHEAEI 98
K+ LG G G V + + +S A+KV+ + R+ + +E +
Sbjct: 40 KVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISL 99
Query: 99 LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKG 158
LK LD I+K VF + V E E G LF+ + R K E + + ++L G
Sbjct: 100 LKSLDHPNIIKLFDVFED-KKYFYLVTEFYEGGELFEQIINRHKFDECDAANIMKQILSG 158
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKG---EVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
+ YLH I+H DIKP N+L+ K +KI DFG+S +
Sbjct: 159 ICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDR---------- 208
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA 275
+GT Y++PE + + Y DVWS GV++ L G YP G D++
Sbjct: 209 -----LGTAYYIAPEVLKKK-----YNEKCDVWSCGVIMYILLCG-YPPFGGQNDQDIIK 257
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
+ + + S E + ++ L D+ KR T EE L ++ K +++ N
Sbjct: 258 KVEKGKYYFDFNDWKNISDEAKELIKLMLTYDYNKRCTAEEALNSRWIKKYANNIN 313
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 34/318 (10%)
Query: 16 SLPATAANHQFRRRRHHFPTSNPTS--PDV----ENISDLKKLTVLGHGNGGIVYKVRHQ 69
S+ A A + H P S P PDV + + LG G Y++
Sbjct: 5 SMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDM 64
Query: 70 KSNSIYALKVLNTTSSTIIRHQA---AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVME 126
+ ++A KV+ S + HQ + E I K LD+ +V H F+ + + V+E
Sbjct: 65 DTKEVFAGKVV-PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG-FFEDDDFVYVVLE 122
Query: 127 HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVK 186
R SL + + RK ++E + ++G+QYLH ++IH D+K NL +N +VK
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVK 182
Query: 187 IADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGD 246
I DFG++ +E GE GT Y++PE + + + F D
Sbjct: 183 IGDFGLATKIEFD--------------GERKKTLCGTPNYIAPEVLCKK----GHSFEVD 224
Query: 247 VWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEK 306
+WSLG ++ LVG P E L I E +P +P +R L
Sbjct: 225 IWSLGCILYTLLVGKPPF----ETSCLKETYIRIKKNE-YSVPRHINPVASALIRRMLHA 279
Query: 307 DWRKRGTVEELLAYPFVT 324
D R +V ELL F T
Sbjct: 280 DPTLRPSVAELLTDEFFT 297
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 126/285 (44%), Gaps = 32/285 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSS--------TIIRHQAAHEAEILKRLDSQ 105
+LG G +V + H+ + YA+K+++ T +R E +IL+++
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 106 FIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
+ Y V + M++G LFD L + LSE + +L+ + LH +
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
I+H D+KP N+L++ +K+ DFG S ++ GE + GT +
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---------------GEKLRSVCGTPS 188
Query: 226 YMSPERVD---SERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
Y++PE ++ ++ G YG D+WS GV++ L G P F + ++ L +
Sbjct: 189 YLAPEIIECSMNDNHPG-YGKEVDMWSTGVIMYTLLAGSPP---FWHRKQMLMLRMIMSG 244
Query: 283 GERLEMPE--TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ PE S + V L +KR T EE LA+PF +
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 34/318 (10%)
Query: 16 SLPATAANHQFRRRRHHFPTSNPTS--PDV----ENISDLKKLTVLGHGNGGIVYKVRHQ 69
S+ A A + H P S P PDV + + LG G Y++
Sbjct: 5 SMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDM 64
Query: 70 KSNSIYALKVLNTTSSTIIRHQA---AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVME 126
+ ++A KV+ S + HQ + E I K LD+ +V H F+ + + V+E
Sbjct: 65 DTKEVFAGKVV-PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG-FFEDDDFVYVVLE 122
Query: 127 HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVK 186
R SL + + RK ++E + ++G+QYLH ++IH D+K NL +N +VK
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVK 182
Query: 187 IADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGD 246
I DFG++ +E GE GT Y++PE + + + F D
Sbjct: 183 IGDFGLATKIEFD--------------GERKKXLCGTPNYIAPEVLCKK----GHSFEVD 224
Query: 247 VWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEK 306
+WSLG ++ LVG P E L I E +P +P +R L
Sbjct: 225 IWSLGCILYTLLVGKPPF----ETSCLKETYIRIKKNE-YSVPRHINPVASALIRRMLHA 279
Query: 307 DWRKRGTVEELLAYPFVT 324
D R +V ELL F T
Sbjct: 280 DPTLRPSVAELLTDEFFT 297
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 121/275 (44%), Gaps = 25/275 (9%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA-HEAEILKRLD 103
+I + + L +G GN V RH + A+K+++ T Q E I+K L+
Sbjct: 13 HIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILN 72
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
IVK V T E + +ME+ G +FD L ++ E +++ +QY H
Sbjct: 73 HPNIVKLFEVIET-EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSAVQYCH 131
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
+I+H D+K NLL++ +KIADFG S +G A G
Sbjct: 132 QKRIVHRDLKAENLLLDADMNIKIADFGFSN---------------EFTVGGKLDAFCGA 176
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y +PE +++ G DVWSLGV++ + G P G +L L + G
Sbjct: 177 PPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----QNLKELRERVLRG 229
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ +P S + ++ L + KRGT+E+++
Sbjct: 230 -KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 263
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 129/287 (44%), Gaps = 30/287 (10%)
Query: 36 SNPTSPDVE-NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTT---SSTIIRHQ 91
++ TS D + +I + + L +G GN V RH + A+++++ T SS++ +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL--QK 59
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV 151
E I+K L+ IVK V T E + VME+ G +FD L ++ E
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++ +QY H I+H D+K NLL++ +KIADFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---------------EF 163
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
G G+ Y +PE +++ G DVWSLGV++ + G P G
Sbjct: 164 TFGNKLDTFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----Q 216
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+L L + G + +P S + ++ L + KRGT+E+++
Sbjct: 217 NLKELRERVLRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/219 (30%), Positives = 96/219 (43%), Gaps = 28/219 (12%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ V + S +K +N S + Q E E+LK LD I+K VF
Sbjct: 30 LGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF 89
Query: 115 YTIEGEICFVMEHMERGSLFD---SLRVR-KKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
+ VME E G L + S + R K LSE ++ + +++ L Y H ++H
Sbjct: 90 EDYHN-MYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALAYFHSQHVVHK 148
Query: 171 DIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
D+KP N+L +KI DFG++ + + E + GT YM
Sbjct: 149 DLKPENILFQDTSPHSPIKIIDFGLAELFKS---------------DEHSTNAAGTALYM 193
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
+P E + D F D+WS GVV+ L G P G
Sbjct: 194 AP-----EVFKRDVTFKCDIWSAGVVMYFLLTGCLPFTG 227
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 88.2 bits (217), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 131/304 (43%), Gaps = 44/304 (14%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V EH+++ F + +I +++L+GL +
Sbjct: 64 HPNIVKLLDVIHT-ENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 123 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-------------- 168
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 169 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 225
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 226 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 285
Query: 319 AYPF 322
A+PF
Sbjct: 286 AHPF 289
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 88/318 (27%), Positives = 134/318 (42%), Gaps = 34/318 (10%)
Query: 16 SLPATAANHQFRRRRHHFPTSNPTS--PDV----ENISDLKKLTVLGHGNGGIVYKVRHQ 69
S+ A A + H P S P PDV + + LG G Y++
Sbjct: 5 SMSAAIAKPSAKPSAHVDPKSAPLKEIPDVLVDPRTMKRYMRGRFLGKGGFAKCYEITDM 64
Query: 70 KSNSIYALKVLNTTSSTIIRHQA---AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVME 126
+ ++A KV+ S + HQ + E I K LD+ +V H F+ + + V+E
Sbjct: 65 DTKEVFAGKVV-PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG-FFEDDDFVYVVLE 122
Query: 127 HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVK 186
R SL + + RK ++E + ++G+QYLH ++IH D+K NL +N +VK
Sbjct: 123 ICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFLNDDMDVK 182
Query: 187 IADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGD 246
I DFG++ +E GE GT Y++PE + + + F D
Sbjct: 183 IGDFGLATKIEFD--------------GERKKDLCGTPNYIAPEVLCKK----GHSFEVD 224
Query: 247 VWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEK 306
+WSLG ++ LVG P E L I E +P +P +R L
Sbjct: 225 IWSLGCILYTLLVGKPPF----ETSCLKETYIRIKKNE-YSVPRHINPVASALIRRMLHA 279
Query: 307 DWRKRGTVEELLAYPFVT 324
D R +V ELL F T
Sbjct: 280 DPTLRPSVAELLTDEFFT 297
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA---HEAEILKRLDS 104
D + + V+G G G V V+ + + IYA+K+LN + R + A E ++L D
Sbjct: 75 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE-MLKRAETACFREERDVLVNGDC 133
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYLH 163
Q+I H F E + VM++ G L L + KL ED+ ++ + +H
Sbjct: 134 QWITALHYAFQD-ENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 192
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
+ +H DIKP N+L++ G +++ADFG + + ++++A +GT
Sbjct: 193 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV------------QSSVA-VGT 239
Query: 224 CAYMSPERVDSERWG-GDYGFAGDVWSLGVVVLECLVGHYPL 264
Y+SPE + + G G YG D WSLGV + E L G P
Sbjct: 240 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 129/287 (44%), Gaps = 30/287 (10%)
Query: 36 SNPTSPDVE-NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTT---SSTIIRHQ 91
++ TS D + +I + + L +G GN V RH + A+++++ T SS++ +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSL--QK 59
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV 151
E I+K L+ IVK V T E + VME+ G +FD L ++ E
Sbjct: 60 LFREVRIMKVLNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAK 118
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++ +QY H I+H D+K NLL++ +KIADFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---------------EF 163
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
G G+ Y +PE +++ G DVWSLGV++ + G P G
Sbjct: 164 TFGNKLDEFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----Q 216
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+L L + G + +P S + ++ L + KRGT+E+++
Sbjct: 217 NLKELRERVLRG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 262
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA---HEAEILKRLDS 104
D + + V+G G G V V+ + + IYA+K+LN + R + A E ++L D
Sbjct: 91 DFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWE-MLKRAETACFREERDVLVNGDC 149
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYLH 163
Q+I H F E + VM++ G L L + KL ED+ ++ + +H
Sbjct: 150 QWITALHYAFQD-ENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVLAIDSIH 208
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
+ +H DIKP N+L++ G +++ADFG + + ++++A +GT
Sbjct: 209 QLHYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTV------------QSSVA-VGT 255
Query: 224 CAYMSPERVDSERWG-GDYGFAGDVWSLGVVVLECLVGHYPL 264
Y+SPE + + G G YG D WSLGV + E L G P
Sbjct: 256 PDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/303 (25%), Positives = 128/303 (42%), Gaps = 44/303 (14%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
IVK V +T E ++ V EH+ + F + +I +++L+GL + H
Sbjct: 61 PNIVKLLDVIHT-ENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCH 119
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
+++H D+KP NLLIN +G +K+ADFG++R T
Sbjct: 120 SHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------------T 165
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 LWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222
Query: 284 ERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELLA 319
+ + P S P F ++ R K D KR + + LA
Sbjct: 223 DEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALA 282
Query: 320 YPF 322
+PF
Sbjct: 283 HPF 285
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 73/285 (25%), Positives = 125/285 (43%), Gaps = 32/285 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSS--------TIIRHQAAHEAEILKRLDSQ 105
+LG G +V + H+ + YA+K+++ T +R E +IL+++
Sbjct: 24 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 83
Query: 106 FIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
+ Y V + M++G LFD L + LSE + +L+ + LH +
Sbjct: 84 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 143
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
I+H D+KP N+L++ +K+ DFG S ++ GE GT +
Sbjct: 144 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---------------GEKLREVCGTPS 188
Query: 226 YMSPERVD---SERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
Y++PE ++ ++ G YG D+WS GV++ L G P F + ++ L +
Sbjct: 189 YLAPEIIECSMNDNHPG-YGKEVDMWSTGVIMYTLLAGSPP---FWHRKQMLMLRMIMSG 244
Query: 283 GERLEMPE--TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ PE S + V L +KR T EE LA+PF +
Sbjct: 245 NYQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 289
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 87.8 bits (216), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH---EAEILKR 101
N + L +G G+ G V V+ + +YA+K +N + R++ + E +I++
Sbjct: 13 NFDHFEILRAIGKGSFGKVCIVQKNDTKKMYAMKYMNK-QKCVERNEVRNVFKELQIMQG 71
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
L+ F+V F E ++ V++ + G L L+ E+ + ++ L Y
Sbjct: 72 LEHPFLVNLWYSFQD-EEDMFMVVDLLLGGDLRYHLQQNVHFKEETVKLFICELVMALDY 130
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L +IIH D+KP N+L++ G V I DF ++ ++ E I M
Sbjct: 131 LQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPR----------------ETQITTM 174
Query: 222 -GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
GT YM+PE S R G Y FA D WSLGV E L G P
Sbjct: 175 AGTKPYMAPEMF-SSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 74/280 (26%), Positives = 123/280 (43%), Gaps = 25/280 (8%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA-HEAEI 98
S + +I + + L +G GN V RH + A+K+++ T Q E I
Sbjct: 5 SDEQPHIGNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRI 64
Query: 99 LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKG 158
+K L+ IVK V T E + +ME+ G +FD L ++ E +++
Sbjct: 65 MKILNHPNIVKLFEVIET-EKTLYLIMEYASGGEVFDYLVAHGRMKEKEARSKFRQIVSA 123
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+QY H +I+H D+K NLL++ +KIADFG S +G
Sbjct: 124 VQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSN---------------EFTVGGKLD 168
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
G+ Y +PE +++ G DVWSLGV++ + G P G +L L
Sbjct: 169 TFCGSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----QNLKELRE 221
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G + +P S + ++ L + KRGT+E+++
Sbjct: 222 RVLRG-KYRIPFYMSTDCENLLKRFLVLNPIKRGTLEQIM 260
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 30/288 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
D+ +I D + VLG G V +++ + A+K + + +E +L +
Sbjct: 15 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHK 72
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
+ IV + Y G + +M+ + G LFD + + +E S + ++VL ++Y
Sbjct: 73 IKHPNIVALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 162 LHGMQIIHGDIKPSNLL---INGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
LH + I+H D+KP NLL ++ ++ I+DFG+S++ + G
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---------------GSVLS 176
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
GT Y++PE + + Y A D WS+GV+ L G+ P F ++ D
Sbjct: 177 TACGTPGYVAPEVLAQKP----YSKAVDCWSIGVIAYILLCGYPP---FYDENDAKLFEQ 229
Query: 279 AICFGERLEMP--ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+ + P + S + F+R +EKD KR T E+ L +P++
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 122/284 (42%), Gaps = 30/284 (10%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSS--------TIIRHQAAHEAEILKRLDSQ 105
+LG G +V + H+ + YA+K+++ T +R E +IL+++
Sbjct: 11 ILGRGVSSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGH 70
Query: 106 FIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
+ Y V + M++G LFD L + LSE + +L+ + LH +
Sbjct: 71 PNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRALLEVICALHKL 130
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
I+H D+KP N+L++ +K+ DFG S ++ GE GT +
Sbjct: 131 NIVHRDLKPENILLDDDMNIKLTDFGFSCQLDP---------------GEKLREVCGTPS 175
Query: 226 YMSPERVDSERWGGD--YGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE ++ YG D+WS GV++ L G P F + ++ L +
Sbjct: 176 YLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP---FWHRKQMLMLRMIMSGN 232
Query: 284 ERLEMPE--TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ PE S + V L +KR T EE LA+PF +
Sbjct: 233 YQFGSPEWDDYSDTVKDLVSRFLVVQPQKRYTAEEALAHPFFQQ 276
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/296 (25%), Positives = 132/296 (44%), Gaps = 43/296 (14%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTS---STIIRHQAAHEAEILKRLD 103
SD +++ VLG G G V K R+ + YA+K + T STI+ E +L L+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-----EVMLLASLN 60
Query: 104 SQFIVKCHAVFY------------TIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISG 150
Q++V+ +A + + + ME+ E G+L+D + D
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR 120
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+ ++L+ L Y+H IIH D+KP N+ I+ VKI DFG+++ V +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
+ + +GT Y++ E +D G Y D++SLG++ E + YP E+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDG---TGHYNEKIDMYSLGIIFFEMI---YPFSTGMER 234
Query: 271 PDLMALICAICFGERLEMPETASPEF--------RRFVRSCLEKDWRKRGTVEELL 318
+++ + ++ +E P P+F ++ +R ++ D KR LL
Sbjct: 235 VNILKKLRSVS----IEFP----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 30/288 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
D+ +I D + VLG G V +++ + A+K + + +E +L +
Sbjct: 15 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
+ IV + Y G + +M+ + G LFD + + +E S + ++VL ++Y
Sbjct: 73 IKHPNIVALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 162 LHGMQIIHGDIKPSNLL---INGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
LH + I+H D+KP NLL ++ ++ I+DFG+S++ + G
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---------------GSVLS 176
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
GT Y++PE + + Y A D WS+GV+ L G+ P F ++ D
Sbjct: 177 TACGTPGYVAPEVLAQKP----YSKAVDCWSIGVIAYILLCGYPP---FYDENDAKLFEQ 229
Query: 279 AICFGERLEMP--ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+ + P + S + F+R +EKD KR T E+ L +P++
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 30/288 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
D+ +I D + VLG G V +++ + A+K + + +E +L +
Sbjct: 15 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
+ IV + Y G + +M+ + G LFD + + +E S + ++VL ++Y
Sbjct: 73 IKHPNIVALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 162 LHGMQIIHGDIKPSNLL---INGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
LH + I+H D+KP NLL ++ ++ I+DFG+S++ + G
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---------------GSVLS 176
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
GT Y++PE + + Y A D WS+GV+ L G+ P F ++ D
Sbjct: 177 TACGTPGYVAPEVLAQKP----YSKAVDCWSIGVIAYILLCGYPP---FYDENDAKLFEQ 229
Query: 279 AICFGERLEMP--ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+ + P + S + F+R +EKD KR T E+ L +P++
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 110/246 (44%), Gaps = 31/246 (12%)
Query: 34 PTSNPTSPDVE---NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH 90
P N P ++ I D + +LG G+ G V+ +K+N +A+K L ++
Sbjct: 2 PELNKERPSLQIKLKIEDFELHKMLGKGSFGKVFLAEFKKTNQFFAIKAL--KKDVVLMD 59
Query: 91 QAAHEAEILKRL-----DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE 145
+ KR+ + F+ F T E + FVME++ G L ++ K
Sbjct: 60 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN-LFFVMEYLNGGDLMYHIQSCHKFDL 118
Query: 146 DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXX 205
+ A ++ GLQ+LH I++ D+K N+L++ G +KIADFG+ +
Sbjct: 119 SRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK----------- 167
Query: 206 XXXXXXXIGEAAIACM-GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
+G+A GT Y++PE + G Y + D WS GV++ E L+G P
Sbjct: 168 ----ENMLGDAKTNEFCGTPDYIAPEIL----LGQKYNHSVDWWSFGVLLYEMLIGQSPF 219
Query: 265 IGFGEK 270
G E+
Sbjct: 220 HGQDEE 225
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 120/273 (43%), Gaps = 28/273 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA---AHEAEILKRLDSQFIVKCH 111
LG G Y++ + ++A KV+ S + HQ + E I K LD+ +V H
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVV-PKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFH 92
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
F+ + + V+E R SL + + RK ++E + ++G+QYLH ++IH D
Sbjct: 93 G-FFEDDDFVYVVLEICRRRSLLELHKRRKAVTEPEARYFMRQTIQGVQYLHNNRVIHRD 151
Query: 172 IKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPER 231
+K NL +N +VKI DFG++ +E GE GT Y++PE
Sbjct: 152 LKLGNLFLNDDMDVKIGDFGLATKIEFD--------------GERKKDLCGTPNYIAPEV 197
Query: 232 VDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
+ + + F D+WSLG ++ LVG P E L I E +P
Sbjct: 198 LCKK----GHSFEVDIWSLGCILYTLLVGKPPF----ETSCLKETYIRIKKNE-YSVPRH 248
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+P +R L D R +V ELL F T
Sbjct: 249 INPVASALIRRMLHADPTLRPSVAELLTDEFFT 281
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 125/268 (46%), Gaps = 38/268 (14%)
Query: 3 LVRERRHQQALTLSLPATAANHQFRRRRHHFPTSNPTSPDVENISDLKKLTVLGHGNGGI 62
L RE+ + L + P T+ Q R R D + L V+G G G
Sbjct: 46 LRREKNILEYLEWAKPFTSKVKQMRLHRE----------------DFEILKVIGRGAFGE 89
Query: 63 VYKVRHQKSNSIYALKVLNTTSSTIIRHQAA---HEAEILKRLDSQFIVKCHAVFYTIEG 119
V V+ + ++ ++A+K+LN + R + A E ++L DS++I H F +
Sbjct: 90 VAVVKLKNADKVFAMKILNKWE-MLKRAETACFREERDVLVNGDSKWITTLHYAFQD-DN 147
Query: 120 EICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLL 178
+ VM++ G L L + +L E++ ++ + +H + +H DIKP N+L
Sbjct: 148 NLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQLHYVHRDIKPDNIL 207
Query: 179 INGKGEVKIADFGVS-RIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW 237
++ G +++ADFG +++E+ ++++A +GT Y+SPE + +
Sbjct: 208 MDMNGHIRLADFGSCLKLMEDGTV-------------QSSVA-VGTPDYISPEILQAMEG 253
Query: 238 G-GDYGFAGDVWSLGVVVLECLVGHYPL 264
G G YG D WSLGV + E L G P
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 129/306 (42%), Gaps = 46/306 (15%)
Query: 44 ENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRL 102
E + + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 103 DSQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQ 160
+ IVK V +T E ++ V E H + D+ + +I +++L+GL
Sbjct: 67 NHPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLA 124
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
+ H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------------ 172
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 173 --TLWYRAPEILLGXKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 281 CFGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEE 316
+ + P S P F ++ R K D KR + +
Sbjct: 228 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 287
Query: 317 LLAYPF 322
LA+PF
Sbjct: 288 ALAHPF 293
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 130/288 (45%), Gaps = 30/288 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
D+ +I D + VLG G V +++ + A+K + + +E +L +
Sbjct: 15 DIRDIYDFR--DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHK 72
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
+ IV + Y G + +M+ + G LFD + + +E S + ++VL ++Y
Sbjct: 73 IKHPNIVALDDI-YESGGHLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQVLDAVKY 131
Query: 162 LHGMQIIHGDIKPSNLL---INGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
LH + I+H D+KP NLL ++ ++ I+DFG+S++ + G
Sbjct: 132 LHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDP---------------GSVLS 176
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
GT Y++PE + + Y A D WS+GV+ L G+ P F ++ D
Sbjct: 177 TACGTPGYVAPEVLAQKP----YSKAVDCWSIGVIAYILLCGYPP---FYDENDAKLFEQ 229
Query: 279 AICFGERLEMP--ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+ + P + S + F+R +EKD KR T E+ L +P++
Sbjct: 230 ILKAEYEFDSPYWDDISDSAKDFIRHLMEKDPEKRFTCEQALQHPWIA 277
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/222 (32%), Positives = 100/222 (45%), Gaps = 23/222 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKRL 102
I D + LG G G VY R +KS+ I ALKVL + + HQ E EI L
Sbjct: 21 TIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQAHL 80
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
I++ + FY I ++E+ RG L+ L+ E + + + L Y
Sbjct: 81 HHPNILRLYNYFYD-RRRIYLILEYAPRGELYKELQKSCTFDEQRTATIMEELADALMYC 139
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
HG ++IH DIKP NLL+ KGE+KIADFG S R G
Sbjct: 140 HGKKVIHRDIKPENLLLGLKGELKIADFGWSVHAPSLRRK----------------TMCG 183
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
T Y+ PE ++ G + D+W +GV+ E LVG+ P
Sbjct: 184 TLDYLPPEMIE----GRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 58/311 (18%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA--------YRV 155
IVK V +T E ++ V E F S+ ++K + ++G+ +++
Sbjct: 62 HPNIVKLLDVIHT-ENKLYLVFE-------FLSMDLKKFMDASALTGIPLPLIKSYLFQL 113
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
L+GL + H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 114 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------- 166
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA 275
T Y +PE + ++ Y A D+WSLG + E + G E L
Sbjct: 167 -------TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 216
Query: 276 LICAICFGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKR 311
+ + + + P S P F ++ R K D KR
Sbjct: 217 IFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 276
Query: 312 GTVEELLAYPF 322
+ + LA+PF
Sbjct: 277 ISAKAALAHPF 287
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 123/287 (42%), Gaps = 33/287 (11%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQF 106
D + L +G G+ G K+R + I K L+ S T Q E +L+ L
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 107 IVKCHA-VFYTIEGEICFVMEHMERGSLFDSL----RVRKKLSEDVISGVAYRVLKGLQY 161
IV+ + + + VME+ E G L + + R+ L E+ + V ++ L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 162 LH-----GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
H G ++H D+KP+N+ ++GK VK+ DFG++RI+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-------------- 172
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMAL 276
A A +GT YMSPE+++ Y D+WSLG ++ E P F +K L
Sbjct: 173 AKAFVGTPYYMSPEQMNR----MSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----EL 224
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
I G+ +P S E + L R +VEE+L P +
Sbjct: 225 AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/311 (25%), Positives = 134/311 (43%), Gaps = 58/311 (18%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA--------YRV 155
IVK V +T E ++ V E F S+ ++K + ++G+ +++
Sbjct: 64 HPNIVKLLDVIHT-ENKLYLVFE-------FLSMDLKKFMDASALTGIPLPLIKSYLFQL 115
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
L+GL + H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------- 168
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA 275
T Y +PE + ++ Y A D+WSLG + E + G E L
Sbjct: 169 -------TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
Query: 276 LICAICFGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKR 311
+ + + + P S P F ++ R K D KR
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 278
Query: 312 GTVEELLAYPF 322
+ + LA+PF
Sbjct: 279 ISAKAALAHPF 289
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 119/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 78 GVI--TENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASK-------GKLPI------KWMAP 181
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R + A DVW GV + E L+ G P G +I I GERL M
Sbjct: 182 ESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 233
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 31/246 (12%)
Query: 34 PTSNPTSPDVE---NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRH 90
P N P ++ I D +LG G+ G V+ +K+N +A+K L ++
Sbjct: 1 PELNKERPSLQIKLKIEDFILHKMLGKGSFGKVFLAEFKKTNQFFAIKAL--KKDVVLMD 58
Query: 91 QAAHEAEILKRL-----DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE 145
+ KR+ + F+ F T E + FVME++ G L ++ K
Sbjct: 59 DDVECTMVEKRVLSLAWEHPFLTHMFCTFQTKEN-LFFVMEYLNGGDLMYHIQSCHKFDL 117
Query: 146 DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXX 205
+ A ++ GLQ+LH I++ D+K N+L++ G +KIADFG+ +
Sbjct: 118 SRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCK----------- 166
Query: 206 XXXXXXXIGEAAIACM-GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
+G+A GT Y++PE + G Y + D WS GV++ E L+G P
Sbjct: 167 ----ENMLGDAKTNXFCGTPDYIAPEIL----LGQKYNHSVDWWSFGVLLYEMLIGQSPF 218
Query: 265 IGFGEK 270
G E+
Sbjct: 219 HGQDEE 224
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/308 (25%), Positives = 130/308 (42%), Gaps = 49/308 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILK 100
D+EN ++K+ G G G+VYK R++ + + ALK + + T + A E +LK
Sbjct: 5 DMENFQKVEKI---GEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLK 61
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKG 158
L+ IVK V +T E ++ V E H + D+ + +I +++L+G
Sbjct: 62 ELNHPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQG 119
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
L + H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV---------- 169
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
T Y +PE + ++ Y A D+WSLG + E + G E L +
Sbjct: 170 ----TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFR 222
Query: 279 AICFGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTV 314
+ + + P S P F ++ R K D KR +
Sbjct: 223 TLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISA 282
Query: 315 EELLAYPF 322
+ LA+PF
Sbjct: 283 KAALAHPF 290
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------------- 165
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 TLWYRAPEILLGXKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 319 AYPF 322
A+PF
Sbjct: 283 AHPF 286
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 122/277 (44%), Gaps = 29/277 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTT---SSTIIRHQAAHEAEILKR 101
+I + + L +G GN V RH + A+K+++ T SS++ + E I+K
Sbjct: 5 HIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--QKLFREVRIMKV 62
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
L+ IVK V T E + VME+ G +FD L + E +++ +QY
Sbjct: 63 LNHPNIVKLFEVIET-EKTLYLVMEYASGGEVFDYLVAHGWMKEKEARAKFRQIVSAVQY 121
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H I+H D+K NLL++ +KIADFG S G
Sbjct: 122 CHQKFIVHRDLKAENLLLDADMNIKIADFGFSN---------------EFTFGNKLDTFC 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
G+ Y +PE +++ G DVWSLGV++ + G P G +L L +
Sbjct: 167 GSPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----QNLKELRERVL 219
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
G + +P S + ++ L + KRGT+E+++
Sbjct: 220 RG-KYRIPFYMSTDCENLLKKFLILNPSKRGTLEQIM 255
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 78 GVI--TENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 135 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 181
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R + A DVW GV + E L+ G P G +I I GERL M
Sbjct: 182 ESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 233
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 128/296 (43%), Gaps = 41/296 (13%)
Query: 44 ENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLD 103
E I D K +LG G+ VY+ + A+K+++ +A ++A +++R+
Sbjct: 8 EKIEDFKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDK--------KAMYKAGMVQRVQ 59
Query: 104 SQFIVKCHAV---------FYTIEGEICFVMEHMERGSLFDSLRVR-KKLSEDVISGVAY 153
++ + C ++ + V+E G + L+ R K SE+ +
Sbjct: 60 NEVKIHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMH 119
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
+++ G+ YLH I+H D+ SNLL+ +KIADFG++ ++
Sbjct: 120 QIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPH------------- 166
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL 273
E GT Y+SPE +G DVWSLG + L+G P K L
Sbjct: 167 -EKHYTLCGTPNYISPEIATRSA----HGLESDVWSLGCMFYTLLIGRPPFDTDTVKNTL 221
Query: 274 MALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSS 329
++ A EMP S E + + L ++ R ++ +L +PF+++ SS+
Sbjct: 222 NKVVLA-----DYEMPSFLSIEAKDLIHQLLRRNPADRLSLSSVLDHPFMSRNSST 272
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 123/287 (42%), Gaps = 33/287 (11%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQF 106
D + L +G G+ G K+R + I K L+ S T Q E +L+ L
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 107 IVKCHA-VFYTIEGEICFVMEHMERGSLFDSL----RVRKKLSEDVISGVAYRVLKGLQY 161
IV+ + + + VME+ E G L + + R+ L E+ + V ++ L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 162 LH-----GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
H G ++H D+KP+N+ ++GK VK+ DFG++RI+ +
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDE--------------DF 172
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMAL 276
A +GT YMSPE+++ Y D+WSLG ++ E P F +K L
Sbjct: 173 AKEFVGTPYYMSPEQMNR----MSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----EL 224
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
I G+ +P S E + L R +VEE+L P +
Sbjct: 225 AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 131/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + + D+ + +I +++L+GL +
Sbjct: 64 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKTFMDA-SALTGIPLPLIKSYLFQLLQGLAF 121
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 168
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 169 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 318 LAYPF 322
LA+PF
Sbjct: 285 LAHPF 289
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 126/285 (44%), Gaps = 45/285 (15%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLN--TTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
VLG G+ G V + + + A+KV++ + E ++LK+LD I+K +
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
F+ +G V E G LFD + RK+ SE + + +VL G+ Y+H +I+H D
Sbjct: 93 E-FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 151
Query: 172 IKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
+KP NLL+ K + ++I DFG+S E ++ +GT Y++
Sbjct: 152 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---------------IGTAYYIA 196
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEM 288
PE + G Y DVWS GV++ L G P G E D++ + + E+
Sbjct: 197 PEVL-----HGTYDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVEKGKY--TFEL 248
Query: 289 PE----------------TASPEFRRFVRSCLEKDWRKRGTVEEL 317
P+ T P R R L+ +W + T E++
Sbjct: 249 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 293
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/306 (25%), Positives = 129/306 (42%), Gaps = 46/306 (15%)
Query: 44 ENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRL 102
E + + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L
Sbjct: 7 EFMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKEL 66
Query: 103 DSQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQ 160
+ IVK V +T E ++ V E H + D+ + +I +++L+GL
Sbjct: 67 NHPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLA 124
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
+ H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 125 FCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------------ 172
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 173 --TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTL 227
Query: 281 CFGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEE 316
+ + P S P F ++ R K D KR + +
Sbjct: 228 GTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKA 287
Query: 317 LLAYPF 322
LA+PF
Sbjct: 288 ALAHPF 293
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 116/274 (42%), Gaps = 40/274 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN-------TTSSTIIRHQAAHEAEILKRLDSQFI 107
+G GN G+ +R +++N + A+K + II H++ I+ R +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIV-RFKEVIL 85
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
H + VME+ G LF+ + + SED +++ G+ Y H MQ+
Sbjct: 86 TPTH---------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYAHAMQV 136
Query: 168 IHGDIKPSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+K N L++G +KIADFG S+ + + +GT A
Sbjct: 137 AHRDLKLENTLLDGSPAPRLKIADFGYSK---------------ASVLHSQPKSAVGTPA 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
Y++PE + + + G DVWS GV + LVG YP E + I I +
Sbjct: 182 YIAPEVLLKKEYDGK---VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQ 237
Query: 286 LEMPETA--SPEFRRFVRSCLEKDWRKRGTVEEL 317
+P+ SPE R + D KR ++ E+
Sbjct: 238 YAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 55/290 (18%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLN-------TTSSTIIRHQAAHEAEILKRLDSQF 106
VLG G+ G V + + + A+KV++ T +++R E ++LK+LD
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-----EVQLLKQLDHPN 110
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K + F+ +G V E G LFD + RK+ SE + + +VL G+ Y+H +
Sbjct: 111 IMKLYE-FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 169
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
I+H D+KP NLL+ K + ++I DFG+S E ++ +GT
Sbjct: 170 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---------------IGT 214
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + G Y DVWS GV++ L G P G E D++ + +
Sbjct: 215 AYYIAPEVLH-----GTYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKY- 267
Query: 284 ERLEMPE----------------TASPEFRRFVRSCLEKDWRKRGTVEEL 317
E+P+ T P R R L+ +W + T E++
Sbjct: 268 -TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 316
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 458 GVI--TENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 515 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 561
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R+ A DVW GV + E L+ G P G +I I GERL M
Sbjct: 562 ESINFRRFTS----ASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 613
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 130/290 (44%), Gaps = 55/290 (18%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLN-------TTSSTIIRHQAAHEAEILKRLDSQF 106
VLG G+ G V + + + A+KV++ T +++R E ++LK+LD
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-----EVQLLKQLDHPN 111
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I+K + F+ +G V E G LFD + RK+ SE + + +VL G+ Y+H +
Sbjct: 112 IMKLYE-FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNK 170
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
I+H D+KP NLL+ K + ++I DFG+S E ++ +GT
Sbjct: 171 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---------------IGT 215
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + G Y DVWS GV++ L G P G E D++ + +
Sbjct: 216 AYYIAPEVLH-----GTYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKY- 268
Query: 284 ERLEMPE----------------TASPEFRRFVRSCLEKDWRKRGTVEEL 317
E+P+ T P R R L+ +W + T E++
Sbjct: 269 -TFELPQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQI 317
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 78 GVI--TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 181
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R + A DVW GV + E L+ G P G +I I GERL M
Sbjct: 182 ESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 233
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 26/275 (9%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+ VLG G V+ V+ + + ++ALK + S +E +LK++ + IV
Sbjct: 14 MEVLGSGAFSEVFLVKQRLTGKLFALKCIKK-SPAFRDSSLENEIAVLKKIKHENIVTLE 72
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
+ Y VM+ + G LFD + R +E S V +VL ++YLH I+H D
Sbjct: 73 DI-YESTTHYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIVHRD 131
Query: 172 IKPSNLLI---NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
+KP NLL ++ I DFG+S++ + G + AC GT Y++
Sbjct: 132 LKPENLLYLTPEENSKIMITDFGLSKMEQN---------------GIMSTAC-GTPGYVA 175
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEM 288
PE + + Y A D WS+GV+ L G+ P E L I +
Sbjct: 176 PEVLAQK----PYSKAVDCWSIGVITYILLCGYPPFYEETES-KLFEKIKEGYYEFESPF 230
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
+ S + F+ LEKD +R T E+ L++P++
Sbjct: 231 WDDISESAKDFICHLLEKDPNERYTCEKALSHPWI 265
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 458 GVI--TENPVWIIMELCTLGELRSFLQVRK-FSLDLASLILYAYQLSTALAYLESKRFVH 514
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 515 RDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 561
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R+ A DVW GV + E L+ G P G +I I GERL M
Sbjct: 562 ESINFRRFTS----ASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 613
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 614 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 644
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/305 (24%), Positives = 129/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 119
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV------------- 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 167 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 318 LAYPF 322
LA+PF
Sbjct: 283 LAHPF 287
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 106 GVI--TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVH 162
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 163 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 209
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R + A DVW GV + E L+ G P G +I I GERL M
Sbjct: 210 ESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 261
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 262 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 292
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 78 GVI--TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVH 134
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 135 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 181
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R + A DVW GV + E L+ G P G +I I GERL M
Sbjct: 182 ESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 233
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 234 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 264
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/284 (27%), Positives = 125/284 (44%), Gaps = 45/284 (15%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLN--TTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
VLG G+ G V + + + A+KV++ + E ++LK+LD I+K +
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
F+ +G V E G LFD + RK+ SE + + +VL G+ Y+H +I+H D
Sbjct: 99 E-FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRD 157
Query: 172 IKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
+KP NLL+ K + ++I DFG+S E ++ +GT Y++
Sbjct: 158 LKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDK---------------IGTAYYIA 202
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEM 288
PE + G Y DVWS GV++ L G P G E D++ + + E+
Sbjct: 203 PEVLH-----GTYDEKCDVWSTGVILYILLSGCPPFNGANEY-DILKKVEKGKY--TFEL 254
Query: 289 PE----------------TASPEFRRFVRSCLEKDWRKRGTVEE 316
P+ T P R R L+ +W + T E+
Sbjct: 255 PQWKKVSESAKDLIRKMLTYVPSMRISARDALDHEWIQTYTKEQ 298
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 96/222 (43%), Gaps = 20/222 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA-HEAEILKRLDS 104
I + + +G GN V RH + A+K+++ T Q E I+K L+
Sbjct: 14 IGNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNH 73
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
IVK V T E + VME+ G +FD L ++ E +++ +QY H
Sbjct: 74 PNIVKLFEVIET-EKTLYLVMEYASGGEVFDYLVAHGRMKEKEARAKFRQIVSAVQYCHQ 132
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+K NLL++G +KIADFG S +G G+
Sbjct: 133 KYIVHRDLKAENLLLDGDMNIKIADFGFSN---------------EFTVGNKLDTFCGSP 177
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
Y +PE +++ G DVWSLGV++ + G P G
Sbjct: 178 PYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG 216
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 118
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 165
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 318 LAYPF 322
LA+PF
Sbjct: 282 LAHPF 286
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/287 (26%), Positives = 122/287 (42%), Gaps = 33/287 (11%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQF 106
D + L +G G+ G K+R + I K L+ S T Q E +L+ L
Sbjct: 7 DYEVLYTIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPN 66
Query: 107 IVKCHA-VFYTIEGEICFVMEHMERGSLFDSL----RVRKKLSEDVISGVAYRVLKGLQY 161
IV+ + + + VME+ E G L + + R+ L E+ + V ++ L+
Sbjct: 67 IVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKE 126
Query: 162 LH-----GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
H G ++H D+KP+N+ ++GK VK+ DFG++RI+
Sbjct: 127 CHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF-------------- 172
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMAL 276
A +GT YMSPE+++ Y D+WSLG ++ E P F +K L
Sbjct: 173 AKTFVGTPYYMSPEQMNR----MSYNEKSDIWSLGCLLYELCALMPPFTAFSQK----EL 224
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
I G+ +P S E + L R +VEE+L P +
Sbjct: 225 AGKIREGKFRRIPYRYSDELNEIITRMLNLKDYHRPSVEEILENPLI 271
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 125/286 (43%), Gaps = 30/286 (10%)
Query: 36 SNPTSPDVE-NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTT---SSTIIRHQ 91
++ TS D + +I + + L +G GN V RH + A+K+++ T SS++ +
Sbjct: 2 NSATSADEQPHIGNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSL--QK 59
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV 151
E I K L+ IVK V T E + V E+ G +FD L + E
Sbjct: 60 LFREVRIXKVLNHPNIVKLFEVIET-EKTLYLVXEYASGGEVFDYLVAHGRXKEKEARAK 118
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++ +QY H I+H D+K NLL++ +KIADFG S
Sbjct: 119 FRQIVSAVQYCHQKFIVHRDLKAENLLLDADXNIKIADFGFSN---------------EF 163
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
G A G Y +PE +++ G DVWSLGV++ + G P G
Sbjct: 164 TFGNKLDAFCGAPPYAAPELFQGKKYDGP---EVDVWSLGVILYTLVSGSLPFDG----Q 216
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+L L + G + +P S + ++ L + KRGT+E++
Sbjct: 217 NLKELRERVLRG-KYRIPFYXSTDCENLLKKFLILNPSKRGTLEQI 261
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------------- 165
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 319 AYPF 322
A+PF
Sbjct: 283 AHPF 286
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 118
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R E
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---------AFGVPVRTYXHEVV---- 165
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 318 LAYPF 322
LA+PF
Sbjct: 282 LAHPF 286
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 64 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 121
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 168
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 169 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 318 LAYPF 322
LA+PF
Sbjct: 285 LAHPF 289
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 63 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 120
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 167
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 168 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 224 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 283
Query: 318 LAYPF 322
LA+PF
Sbjct: 284 LAHPF 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 118
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R E
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---------AFGVPVRTYXHEVV---- 165
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 318 LAYPF 322
LA+PF
Sbjct: 282 LAHPF 286
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 80 GVI--TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVH 136
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 137 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 183
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R + A DVW GV + E L+ G P G +I I GERL M
Sbjct: 184 ESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 235
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 236 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 266
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 108/247 (43%), Gaps = 27/247 (10%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K +S +R + EA +++ D IVK V E + +ME G L
Sbjct: 47 AIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI--TENPVWIIMELCTLGELRS 104
Query: 136 SLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVS 193
L+VRK S D+ S + AY++ L YL + +H DI N+L++ VK+ DFG+S
Sbjct: 105 FLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLS 163
Query: 194 RIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVV 253
R +E++ G+ I +M+PE ++ R + A DVW GV
Sbjct: 164 RYMEDSTYYKASK-------GKLPI------KWMAPESINFRR----FTSASDVWMFGVC 206
Query: 254 VLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRG 312
+ E L+ G P G +I I GERL MP P + C D +R
Sbjct: 207 MWEILMHGVKPFQGVKNN----DVIGRIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRP 262
Query: 313 TVEELLA 319
EL A
Sbjct: 263 RFTELKA 269
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 64 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 121
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 122 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 168
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 169 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 224
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 225 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 284
Query: 318 LAYPF 322
LA+PF
Sbjct: 285 LAHPF 289
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 63 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 120
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 121 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 167
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 168 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 224 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 283
Query: 318 LAYPF 322
LA+PF
Sbjct: 284 LAHPF 288
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 64
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 65 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 122
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 123 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 169
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 170 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 225
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 226 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 285
Query: 318 LAYPF 322
LA+PF
Sbjct: 286 LAHPF 290
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKDFMDA-SALTGIPLPLIKSYLFQLLQGLAF 118
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R E
Sbjct: 119 CHSHRVLHRDLKPENLLINTEGAIKLADFGLAR---------AFGVPVRTYXHEVV---- 165
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 318 LAYPF 322
LA+PF
Sbjct: 282 LAHPF 286
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------------- 165
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 319 AYPF 322
A+PF
Sbjct: 283 AHPF 286
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------------- 164
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 165 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 319 AYPF 322
A+PF
Sbjct: 282 AHPF 285
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 119
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 167 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 318 LAYPF 322
LA+PF
Sbjct: 283 LAHPF 287
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 63 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 120
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 121 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 167
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 168 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 223
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 224 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 283
Query: 318 LAYPF 322
LA+PF
Sbjct: 284 LAHPF 288
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 119
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 CHSHRVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 167 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 318 LAYPF 322
LA+PF
Sbjct: 283 LAHPF 287
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 75 GVI--TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVH 131
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 132 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 178
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R + A DVW GV + E L+ G P G +I I GERL M
Sbjct: 179 ESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 230
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 231 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 261
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------------- 165
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 319 AYPF 322
A+PF
Sbjct: 283 AHPF 286
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 30/271 (11%)
Query: 55 LGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
+G G G V++ + + A+K +S +R + EA +++ D IVK
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGV--AYRVLKGLQYLHGMQIIH 169
V E + +ME G L L+VRK S D+ S + AY++ L YL + +H
Sbjct: 81 GVI--TENPVWIIMELCTLGELRSFLQVRK-YSLDLASLILYAYQLSTALAYLESKRFVH 137
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
DI N+L++ VK+ DFG+SR +E++ G+ I +M+P
Sbjct: 138 RDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASK-------GKLPI------KWMAP 184
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ R + A DVW GV + E L+ G P G +I I GERL M
Sbjct: 185 ESINFRR----FTSASDVWMFGVCMWEILMHGVKPFQGVKNN----DVIGRIENGERLPM 236
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P P + C D +R EL A
Sbjct: 237 PPNCPPTLYSLMTKCWAYDPSRRPRFTELKA 267
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 58/311 (18%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 62
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA--------YRV 155
IVK V +T E ++ V E F S+ ++ + ++G+ +++
Sbjct: 63 HPNIVKLLDVIHT-ENKLYLVFE-------FLSMDLKDFMDASALTGIPLPLIKSYLFQL 114
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
L+GL + H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 115 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------- 167
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA 275
T Y +PE + ++ Y A D+WSLG + E + G E L
Sbjct: 168 -------TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 217
Query: 276 LICAICFGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKR 311
+ + + + P S P F ++ R K D KR
Sbjct: 218 IFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 277
Query: 312 GTVEELLAYPF 322
+ + LA+PF
Sbjct: 278 ISAKAALAHPF 288
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 129/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R E
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---------AFGVPVRTYXHEVV----- 164
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 165 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 319 AYPF 322
A+PF
Sbjct: 282 AHPF 285
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 60
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 118
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 119 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 165
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 221
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 222 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 281
Query: 318 LAYPF 322
LA+PF
Sbjct: 282 LAHPF 286
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 84.7 bits (208), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/311 (24%), Positives = 133/311 (42%), Gaps = 58/311 (18%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 63
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA--------YRV 155
IVK V +T E ++ V E F S+ ++ + ++G+ +++
Sbjct: 64 HPNIVKLLDVIHT-ENKLYLVFE-------FLSMDLKDFMDASALTGIPLPLIKSYLFQL 115
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
L+GL + H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 116 LQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------- 168
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA 275
T Y +PE + ++ Y A D+WSLG + E + G E L
Sbjct: 169 -------TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFR 218
Query: 276 LICAICFGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKR 311
+ + + + P S P F ++ R K D KR
Sbjct: 219 IFRTLGTPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKR 278
Query: 312 GTVEELLAYPF 322
+ + LA+PF
Sbjct: 279 ISAKAALAHPF 289
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 46/305 (15%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLD 103
++ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 2 HMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELN 61
Query: 104 SQFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 HPNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAF 119
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 CHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV------------- 166
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 167 -TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 222
Query: 282 FGERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEEL 317
+ + P S P F ++ R K D KR + +
Sbjct: 223 TPDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAA 282
Query: 318 LAYPF 322
LA+PF
Sbjct: 283 LAHPF 287
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTII----RHQAAHEAEILKRLDSQFIVKC 110
LG G +++ + ++A K++ S ++ R + + E I + L Q +V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
H F+ + V+E R SL + + RK L+E +++ G QYLH ++IH
Sbjct: 83 HG-FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+K NL +N EVKI DFG++ VE GE GT Y++PE
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--------------GERKKTLCGTPNYIAPE 187
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + + F DVWS+G ++ LVG P E L I E +P+
Sbjct: 188 VLSKK----GHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNE-YSIPK 238
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+P ++ L+ D R T+ ELL F T
Sbjct: 239 HINPVAASLIQKMLQTDPTARPTINELLNDEFFT 272
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTII----RHQAAHEAEILKRLDSQFIVKC 110
LG G +++ + ++A K++ S ++ R + + E I + L Q +V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 86
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
H F+ + V+E R SL + + RK L+E +++ G QYLH ++IH
Sbjct: 87 HG-FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 145
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+K NL +N EVKI DFG++ VE GE GT Y++PE
Sbjct: 146 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--------------GERKKTLCGTPNYIAPE 191
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + + F DVWS+G ++ LVG P E L I E +P+
Sbjct: 192 VLSKK----GHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNE-YSIPK 242
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+P ++ L+ D R T+ ELL F T
Sbjct: 243 HINPVAASLIQKMLQTDPTARPTINELLNDEFFT 276
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 77/304 (25%), Positives = 129/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R E
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLAR---------AFGVPVRTYXHEVV----- 164
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 165 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 319 AYPF 322
A+PF
Sbjct: 282 AHPF 285
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/302 (25%), Positives = 127/302 (42%), Gaps = 46/302 (15%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDSQF 106
+ +K+ +G G G+VYK R++ + + ALK + + T + A E +LK L+
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN 62
Query: 107 IVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
IVK V +T E ++ V E H + D+ + +I +++L+GL + H
Sbjct: 63 IVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFCHS 120
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
+++H D+KP NLLIN +G +K+ADFG++R T
Sbjct: 121 HRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV--------------TL 166
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGE 284
Y +PE + ++ Y A D+WSLG + E + G E L + + +
Sbjct: 167 WYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPD 223
Query: 285 RLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELLAY 320
+ P S P F ++ R K D KR + + LA+
Sbjct: 224 EVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAH 283
Query: 321 PF 322
PF
Sbjct: 284 PF 285
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTII----RHQAAHEAEILKRLDSQFIVKC 110
LG G +++ + ++A K++ S ++ R + + E I + L Q +V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 104
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
H F+ + V+E R SL + + RK L+E +++ G QYLH ++IH
Sbjct: 105 HG-FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 163
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+K NL +N EVKI DFG++ VE GE GT Y++PE
Sbjct: 164 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--------------GERKKVLCGTPNYIAPE 209
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + + F DVWS+G ++ LVG P E L I E +P+
Sbjct: 210 VLSKK----GHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNE-YSIPK 260
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+P ++ L+ D R T+ ELL F T
Sbjct: 261 HINPVAASLIQKMLQTDPTARPTINELLNDEFFT 294
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 115/274 (41%), Gaps = 40/274 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN-------TTSSTIIRHQAAHEAEILKRLDSQFI 107
+G GN G+ +R ++SN + A+K + II H++ I+ R +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV-RFKEVIL 84
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
H + VME+ G LF+ + + SED +++ G+ Y H MQ+
Sbjct: 85 TPTH---------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 135
Query: 168 IHGDIKPSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+K N L++G +KI DFG S+ + + +GT A
Sbjct: 136 CHRDLKLENTLLDGSPAPRLKICDFGYSK---------------SSVLHSQPKSTVGTPA 180
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
Y++PE + + + G DVWS GV + LVG YP E + I I +
Sbjct: 181 YIAPEVLLKKEYDGK---VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQ 236
Query: 286 LEMPETA--SPEFRRFVRSCLEKDWRKRGTVEEL 317
+P+ SPE R + D KR ++ E+
Sbjct: 237 YAIPDYVHISPECRHLISRIFVADPAKRISIPEI 270
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTII----RHQAAHEAEILKRLDSQFIVKC 110
LG G +++ + ++A K++ S ++ R + + E I + L Q +V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 82
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
H F+ + V+E R SL + + RK L+E +++ G QYLH ++IH
Sbjct: 83 HG-FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 141
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+K NL +N EVKI DFG++ VE GE GT Y++PE
Sbjct: 142 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--------------GERKKTLCGTPNYIAPE 187
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + + F DVWS+G ++ LVG P E L I E +P+
Sbjct: 188 VLSKK----GHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNE-YSIPK 238
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+P ++ L+ D R T+ ELL F T
Sbjct: 239 HINPVAASLIQKMLQTDPTARPTINELLNDEFFT 272
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 131/296 (44%), Gaps = 43/296 (14%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTS---STIIRHQAAHEAEILKRLD 103
SD +++ VLG G G V K R+ + YA+K + T STI+ E +L L+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-----EVMLLASLN 60
Query: 104 SQFIVKCHAVFY------------TIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISG 150
Q++V+ +A + + + ME+ E +L+D + D
Sbjct: 61 HQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+ ++L+ L Y+H IIH D+KP N+ I+ VKI DFG+++ V +
Sbjct: 121 LFRQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
+ + +GT Y++ E +D G Y D++SLG++ E + YP E+
Sbjct: 181 PGSSDNLTSAIGTAMYVATEVLDG---TGHYNEKIDMYSLGIIFFEMI---YPFSTGMER 234
Query: 271 PDLMALICAICFGERLEMPETASPEF--------RRFVRSCLEKDWRKRGTVEELL 318
+++ + ++ +E P P+F ++ +R ++ D KR LL
Sbjct: 235 VNILKKLRSVS----IEFP----PDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTII----RHQAAHEAEILKRLDSQFIVKC 110
LG G +++ + ++A K++ S ++ R + + E I + L Q +V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 106
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
H F+ + V+E R SL + + RK L+E +++ G QYLH ++IH
Sbjct: 107 HG-FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 165
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+K NL +N EVKI DFG++ VE GE GT Y++PE
Sbjct: 166 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--------------GERKKVLCGTPNYIAPE 211
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + + F DVWS+G ++ LVG P E L I E +P+
Sbjct: 212 VLSKK----GHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNE-YSIPK 262
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+P ++ L+ D R T+ ELL F T
Sbjct: 263 HINPVAASLIQKMLQTDPTARPTINELLNDEFFT 296
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 128/301 (42%), Gaps = 47/301 (15%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
+K+ +G G+ G+V+K R++ + I A+K L + +I+ A E +LK+L +V
Sbjct: 6 EKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLV 65
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
VF + + V E+ + L + R ++ + E ++ + ++ L+ + + H I
Sbjct: 66 NLLEVFRR-KRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQTLQAVNFCHKHNCI 124
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+KP N+LI +K+ DFG +R++ + T Y S
Sbjct: 125 HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDE--------------VATRWYRS 170
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI----------- 277
PE + + YG DVW++G V E L G PL D + LI
Sbjct: 171 PELLVGD---TQYGPPVDVWAIGCVFAELLSG-VPLWPGKSDVDQLYLIRKTLGDLIPRH 226
Query: 278 ------CAICFGERLEMPETASPEFRRF----------VRSCLEKDWRKRGTVEELLAYP 321
G ++ PE P +F ++ CL D +R T E+LL +P
Sbjct: 227 QQVFSTNQYFSGVKIPDPEDMEPLELKFPNISYPALGLLKGCLHMDPTERLTCEQLLHHP 286
Query: 322 F 322
+
Sbjct: 287 Y 287
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/274 (25%), Positives = 115/274 (41%), Gaps = 40/274 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN-------TTSSTIIRHQAAHEAEILKRLDSQFI 107
+G GN G+ +R ++SN + A+K + II H++ I+ R +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIV-RFKEVIL 85
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
H + VME+ G LF+ + + SED +++ G+ Y H MQ+
Sbjct: 86 TPTH---------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 168 IHGDIKPSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+K N L++G +KI DFG S+ + + +GT A
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICDFGYSK---------------SSVLHSQPKSTVGTPA 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
Y++PE + + + G DVWS GV + LVG YP E + I I +
Sbjct: 182 YIAPEVLLKKEYDGK---VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQ 237
Query: 286 LEMPETA--SPEFRRFVRSCLEKDWRKRGTVEEL 317
+P+ SPE R + D KR ++ E+
Sbjct: 238 YAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 120/274 (43%), Gaps = 30/274 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTII----RHQAAHEAEILKRLDSQFIVKC 110
LG G +++ + ++A K++ S ++ R + + E I + L Q +V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIV--PKSLLLKPHQREKMSMEISIHRSLAHQHVVGF 80
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
H F+ + V+E R SL + + RK L+E +++ G QYLH ++IH
Sbjct: 81 HG-FFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEARYYLRQIVLGCQYLHRNRVIHR 139
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+K NL +N EVKI DFG++ VE GE GT Y++PE
Sbjct: 140 DLKLGNLFLNEDLEVKIGDFGLATKVEYD--------------GERKKVLCGTPNYIAPE 185
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPE 290
+ + + F DVWS+G ++ LVG P E L I E +P+
Sbjct: 186 VLSKK----GHSFEVDVWSIGCIMYTLLVGKPPF----ETSCLKETYLRIKKNE-YSIPK 236
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+P ++ L+ D R T+ ELL F T
Sbjct: 237 HINPVAASLIQKMLQTDPTARPTINELLNDEFFT 270
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYAL-KVLNTTSSTIIRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + AL K+ T + + A E +LK L+
Sbjct: 2 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 61
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 62 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 120 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------------- 165
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 166 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 222
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 223 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 282
Query: 319 AYPF 322
A+PF
Sbjct: 283 AHPF 286
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/304 (25%), Positives = 128/304 (42%), Gaps = 46/304 (15%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYAL-KVLNTTSSTIIRHQAAHEAEILKRLDS 104
+ + +K+ +G G G+VYK R++ + + AL K+ T + + A E +LK L+
Sbjct: 1 MENFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNH 60
Query: 105 QFIVKCHAVFYTIEGEICFVME--HMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
IVK V +T E ++ V E H + D+ + +I +++L+GL +
Sbjct: 61 PNIVKLLDVIHT-ENKLYLVFEFLHQDLKKFMDA-SALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +++H D+KP NLLIN +G +K+ADFG++R
Sbjct: 119 HSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-------------- 164
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T Y +PE + ++ Y A D+WSLG + E + G E L + +
Sbjct: 165 TLWYRAPEILLGCKY---YSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGT 221
Query: 283 GERLEMPETAS-----PEFRRFVRSCLEK-------------------DWRKRGTVEELL 318
+ + P S P F ++ R K D KR + + L
Sbjct: 222 PDEVVWPGVTSMPDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAAL 281
Query: 319 AYPF 322
A+PF
Sbjct: 282 AHPF 285
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/288 (25%), Positives = 129/288 (44%), Gaps = 30/288 (10%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
D++ I + K+ LG G V + + ++A+K + + +E +L++
Sbjct: 19 DIKKIFEFKE--TLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRK 76
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
+ + IV + Y + VM+ + G LFD + + +E S + +VL + Y
Sbjct: 77 IKHENIVALEDI-YESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQVLDAVYY 135
Query: 162 LHGMQIIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
LH M I+H D+KP NLL + E + I+DFG+S++ + G+
Sbjct: 136 LHRMGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEGK---------------GDVMS 180
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
GT Y++PE + + Y A D WS+GV+ L G+ P F ++ D
Sbjct: 181 TACGTPGYVAPEVLAQK----PYSKAVDCWSIGVIAYILLCGYPP---FYDENDSKLFEQ 233
Query: 279 AICFGERLEMP--ETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
+ + P + S + F+R+ +EKD KR T E+ +P++
Sbjct: 234 ILKAEYEFDSPYWDDISDSAKDFIRNLMEKDPNKRYTCEQAARHPWIA 281
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 83.6 bits (205), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/326 (24%), Positives = 147/326 (45%), Gaps = 37/326 (11%)
Query: 4 VRERRHQQALTLSLPATAANHQFRRRRHHFPTSNPTSPDVENISDLKKLTVLGHGNGGIV 63
V+ +R AL + +PA A H T+ + V + + K +LG G G V
Sbjct: 54 VKSKR-TSALAVDIPAPPAPFD-----HRIVTAKQGA--VNSFYTVSKTEILGGGRFGQV 105
Query: 64 YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICF 123
+K + A K++ T + + +E ++ +LD +++ + F + + +I
Sbjct: 106 HKCEETATGLKLAAKIIKTRGMKD-KEEVKNEISVMNQLDHANLIQLYDAFES-KNDIVL 163
Query: 124 VMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGK 182
VME+++ G LFD + L+E ++ +G++++H M I+H D+KP N+L +
Sbjct: 164 VMEYVDGGELFDRIIDESYNLTELDTILFMKQICEGIRHMHQMYILHLDLKPENILCVNR 223
Query: 183 G--EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGD 240
++KI DFG++R + E GT +++PE V+ +
Sbjct: 224 DAKQIKIIDFGLARRYKPR---------------EKLKVNFGTPEFLAPEVVNYDF---- 264
Query: 241 YGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFV 300
F D+WS+GV+ L G P +G + L ++ E E + S E + F+
Sbjct: 265 VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLEDEEFQDI-SEEAKEFI 323
Query: 301 RSCL--EKDWRKRGTVEELLAYPFVT 324
L EK WR + E L +P+++
Sbjct: 324 SKLLIKEKSWRISAS--EALKHPWLS 347
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 134/294 (45%), Gaps = 34/294 (11%)
Query: 32 HFPTSNPTSPDVENISDLKKLTV-----LGHGNGGIVYKVRHQKSNSIYALKVLNTTSST 86
H T P P E+ ++ + T+ LG G G V+ + + ++ A+K L S +
Sbjct: 3 HMQTQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMS 61
Query: 87 IIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLS 144
A EA ++K+L Q +V+ +AV + I + E+ME GSL D L+ KL+
Sbjct: 62 PDAFLA--EANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLT 117
Query: 145 EDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXX 204
+ + +A ++ +G+ ++ IH D++ +N+L++ KIADFG++R++E+
Sbjct: 118 INKLLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-- 175
Query: 205 XXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYP 263
A + +PE ++ G + DVWS G+++ E + G P
Sbjct: 176 -----------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIP 220
Query: 264 LIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
G +I + G R+ P+ E + +R C ++ R T + L
Sbjct: 221 YPGMTNP----EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 270
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 64/216 (29%), Positives = 102/216 (47%), Gaps = 31/216 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI--LKRLDSQ-FIVKCH 111
LG G+ I K H+KSN +A+K+++ R +A + EI LK + IVK H
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISK------RMEANTQKEITALKLCEGHPNIVKLH 72
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
VF+ + VME + G LF+ ++ +K SE S + +++ + ++H + ++H D
Sbjct: 73 EVFHD-QLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRD 131
Query: 172 IKPSNLLI---NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
+KP NLL N E+KI DFG +R+ C T Y +
Sbjct: 132 LKPENLLFTDENDNLEIKIIDFGFARLKPPDNQ-------------PLKTPCF-TLHYAA 177
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
PE ++ Y + D+WSLGV++ L G P
Sbjct: 178 PELLNQ----NGYDESCDLWSLGVILYTMLSGQVPF 209
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 26/233 (11%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH----EAE 97
D ++D L VLG G+ G V + + +YA+K+L +I+ E
Sbjct: 14 DRVKLTDFNFLMVLGKGSFGKVMLADRKGTEELYAIKILK--KDVVIQDDDVECTMVEKR 71
Query: 98 ILKRLDSQ-FIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+L LD F+ + H+ F T++ + FVME++ G L ++ K E A +
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVD-RLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEIS 130
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
GL +LH II+ D+K N++++ +G +KIADFG+ + G
Sbjct: 131 IGLFFLHKRGIIYRDLKLDNVMLDSEGHIKIADFGMCK--------------EHMMDGVT 176
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGE 269
GT Y++PE + + YG + D W+ GV++ E L G P G E
Sbjct: 177 TREFCGTPDYIAPEIIAYQP----YGKSVDWWAYGVLLYEMLAGQPPFDGEDE 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 82.8 bits (203), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/290 (27%), Positives = 129/290 (44%), Gaps = 55/290 (18%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLN-------TTSSTIIRHQAAHEAEILKRLDSQF 106
VLG G+ G V + + + A+KV++ T +++R E ++LK+LD
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLR-----EVQLLKQLDHPN 87
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
I K + F+ +G V E G LFD + RK+ SE + + +VL G+ Y H +
Sbjct: 88 IXKLYE-FFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLSGITYXHKNK 146
Query: 167 IIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
I+H D+KP NLL+ K + ++I DFG+S E ++ +GT
Sbjct: 147 IVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDK---------------IGT 191
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y++PE + G Y DVWS GV++ L G P G E D++ + +
Sbjct: 192 AYYIAPEVL-----HGTYDEKCDVWSTGVILYILLSGCPPFNGANE-YDILKKVEKGKY- 244
Query: 284 ERLEMPE----------------TASPEFRRFVRSCLEKDWRKRGTVEEL 317
E+P+ T P R R L+ +W + T E++
Sbjct: 245 -TFELPQWKKVSESAKDLIRKXLTYVPSXRISARDALDHEWIQTYTKEQI 293
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 157 ASGMKYLSDMGFVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
+KL +G G G V+K ++++++ I ALK V + A E +LK L + IV
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 109 KCHAVFYTIEGEICFVMEHMERG--SLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+ H V ++ + ++ V E ++ FDS L +++ +++LKGL + H
Sbjct: 65 RLHDVLHS-DKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSR 194
++H D+KP NLLIN GE+K+ADFG++R
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLAR 149
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 124/281 (44%), Gaps = 35/281 (12%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAHEAEILKRLDSQF 106
DL +G G+ G V++ S+ A+K+L R ++ E I+KRL
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLR---VRKKLSEDVISGVAYRVLKGLQYLH 163
IV T + V E++ RGSL+ L R++L E +AY V KG+ YLH
Sbjct: 96 IVLFMGAV-TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 164 GMQ--IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
I+H ++K NLL++ K VK+ DFG+SR+ T ++ +
Sbjct: 155 NRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFL--------------SSKSAA 200
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT +M+PE + E DV+S GV++ E P ++ A+
Sbjct: 201 GTPEWMAPEVLRDE----PSNEKSDVYSFGVILWELATLQQPWGNLNPA----QVVAAVG 252
Query: 282 FG-ERLEMPETASPEFRRFVRSCLEKDWRKR---GTVEELL 318
F +RLE+P +P+ + C + KR T+ +LL
Sbjct: 253 FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 41 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 96
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 97 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 154
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 155 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 200
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 201 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 249
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 250 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 300
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/271 (26%), Positives = 121/271 (44%), Gaps = 26/271 (9%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S K+L LG+G VYK ++ + ALK + S A E ++K L +
Sbjct: 5 SQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN 64
Query: 107 IVKCHAVFYTIEGEICFVMEHMERG--SLFDSLRV---RKKLSEDVISGVAYRVLKGLQY 161
IV+ + V +T E ++ V E M+ DS V + L +++ +++L+GL +
Sbjct: 65 IVRLYDVIHT-ENKLTLVFEFMDNDLKKYMDSRTVGNTPRGLELNLVKYFQWQLLQGLAF 123
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H +I+H D+KP NLLIN +G++K+ DFG++R +
Sbjct: 124 CHENKILHRDLKPQNLLINKRGQLKLGDFGLARAF----------GIPVNTFSSEVV--- 170
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI- 280
T Y +P+ + R Y + D+WS G ++ E + G PL + + LI I
Sbjct: 171 -TLWYRAPDVLMGSR---TYSTSIDIWSCGCILAEMITGK-PLFPGTNDEEQLKLIFDIM 225
Query: 281 -CFGERLEMPETASPEFRRFVRSCLEKDWRK 310
E L T P++ ++ +D R+
Sbjct: 226 GTPNESLWPSVTKLPKYNPNIQQRPPRDLRQ 256
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 81.6 bits (200), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 34/291 (11%)
Query: 35 TSNPTSPDVENISDLKKLTV-----LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR 89
T P P E+ ++ + T+ LG G G V+ + + ++ A+K L S +
Sbjct: 2 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDA 60
Query: 90 HQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDV 147
A EA ++K+L Q +V+ +AV + I + E+ME GSL D L+ KL+ +
Sbjct: 61 FLA--EANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINK 116
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
+ +A ++ +G+ ++ IH D++ +N+L++ KIADFG++R++E+
Sbjct: 117 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT----- 171
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIG 266
A + +PE ++ G + DVWS G+++ E + G P G
Sbjct: 172 --------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
P+ +I + G R+ P+ E + +R C ++ R T + L
Sbjct: 220 MT-NPE---VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 34/291 (11%)
Query: 35 TSNPTSPDVENISDLKKLTV-----LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR 89
T P P E+ ++ + T+ LG G G V+ + + ++ A+K L S +
Sbjct: 2 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDA 60
Query: 90 HQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDV 147
A EA ++K+L Q +V+ +AV + I + E+ME GSL D L+ KL+ +
Sbjct: 61 FLA--EANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINK 116
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
+ +A ++ +G+ ++ IH D++ +N+L++ KIADFG++R++E+
Sbjct: 117 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT----- 171
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIG 266
A + +PE ++ G + DVWS G+++ E + G P G
Sbjct: 172 --------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPG 219
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+I + G R+ P+ E + +R C ++ R T + L
Sbjct: 220 MTNP----EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 266
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 15 LKLVERLGAGQAGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 71
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 72 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDAEXT-------------AREGAKFPIKW 176
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G P+ +I + G R
Sbjct: 177 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPE---VIQNLERGYR 228
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 135/291 (46%), Gaps = 34/291 (11%)
Query: 35 TSNPTSPDVENISDLKKLTV-----LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR 89
T P P E+ ++ + T+ LG G G V+ + + ++ A+K L S +
Sbjct: 1 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDA 59
Query: 90 HQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDV 147
A EA ++K+L Q +V+ +AV + I + E+ME GSL D L+ KL+ +
Sbjct: 60 FLA--EANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINK 115
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
+ +A ++ +G+ ++ IH D++ +N+L++ KIADFG++R++E+
Sbjct: 116 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT----- 170
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIG 266
A + +PE ++ G + DVWS G+++ E + G P G
Sbjct: 171 --------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPG 218
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
P+ +I + G R+ P+ E + +R C ++ R T + L
Sbjct: 219 MT-NPE---VIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 265
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 126/288 (43%), Gaps = 27/288 (9%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTS---STIIRHQAAHEAEILKRLD 103
SD +++ VLG G G V K R+ + YA+K + T STI+ E +L L+
Sbjct: 6 SDFEEIAVLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-----EVXLLASLN 60
Query: 104 SQFIVKCHAVFY-----------TIEGEICFVM-EHMERGSLFDSLRVRK-KLSEDVISG 150
Q++V+ +A + + F+ E+ E +L+D + D
Sbjct: 61 HQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR 120
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+ ++L+ L Y+H IIH ++KP N+ I+ VKI DFG+++ V +
Sbjct: 121 LFRQILEALSYIHSQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNL 180
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
+ + +GT Y++ E +D G Y D +SLG++ E + YP E+
Sbjct: 181 PGSSDNLTSAIGTAXYVATEVLDG---TGHYNEKIDXYSLGIIFFEXI---YPFSTGXER 234
Query: 271 PDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+++ + ++ + + ++ +R ++ D KR LL
Sbjct: 235 VNILKKLRSVSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLL 282
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 31 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 86
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 87 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 144
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 145 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDP--------------E 190
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 191 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 239
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 240 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 290
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 81.3 bits (199), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ ++ + +
Sbjct: 32 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHVNILLFM 86
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + K + +A + +G+ YLH IIH D+
Sbjct: 87 GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ E++R G+ +M+PE +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLS----------GSILWMAPEVI 194
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 195 RMQD-SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R + +LA
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 134/291 (46%), Gaps = 34/291 (11%)
Query: 35 TSNPTSPDVENISDLKKLTV-----LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR 89
T P P E+ ++ + T+ LG G G V+ + + ++ A+K L S +
Sbjct: 4 TQKPQKPWWEDEWEVPRETLKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDA 62
Query: 90 HQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDV 147
A EA ++K+L Q +V+ +AV + I + E+ME GSL D L+ KL+ +
Sbjct: 63 FLA--EANLMKQLQHQRLVRLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINK 118
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
+ +A ++ +G+ ++ IH D++ +N+L++ KIADFG++R++E+
Sbjct: 119 LLDMAAQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT----- 173
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIG 266
A + +PE ++ G + DVWS G+++ E + G P G
Sbjct: 174 --------AREGAKFPIKWTAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPG 221
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+I + G R+ P+ E + +R C ++ R T + L
Sbjct: 222 MTNP----EVIQNLERGYRMVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 268
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 81.3 bits (199), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 14 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 69
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 70 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 127
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 173
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 222
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 223 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 273
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 114/274 (41%), Gaps = 40/274 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN-------TTSSTIIRHQAAHEAEILKRLDSQFI 107
+G GN G+ +R ++SN + A+K + II H++ I+ R +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV-RFKEVIL 85
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
H + VME+ G LF+ + + SED +++ G+ Y H MQ+
Sbjct: 86 TPTH---------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 168 IHGDIKPSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+K N L++G +KI FG S+ + + +GT A
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK---------------SSVLHSQPKSTVGTPA 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
Y++PE + + + G DVWS GV + LVG YP E + I I +
Sbjct: 182 YIAPEVLLKKEYDGK---VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQ 237
Query: 286 LEMPETA--SPEFRRFVRSCLEKDWRKRGTVEEL 317
+P+ SPE R + D KR ++ E+
Sbjct: 238 YAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 121/270 (44%), Gaps = 29/270 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK LG G G V+ + K + A+K + S ++ A EA ++K L +V
Sbjct: 17 LKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEAFLA--EANVMKTLQHDKLV 73
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHGMQ 166
K HAV + I + E M +GSL D L+ + + + + + ++ +G+ ++
Sbjct: 74 KLHAV--VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRN 131
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 132 YIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT-------------AREGAKFPIKW 178
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G++++E + G P G P+ +I A+ G R
Sbjct: 179 TAPEAINF----GSFTIKSDVWSFGILLMEIVTYGRIPYPGMS-NPE---VIRALERGYR 230
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVE 315
+ PE E + C + +R T E
Sbjct: 231 MPRPENCPEELYNIMMRCWKNRPEERPTFE 260
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 42/292 (14%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA--HEAEILKRLDSQF 106
++ VLG G G V + + + +YA K L + +A +E +IL++++S+F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSL-FDSLRV-RKKLSEDVISGVAYRVLKGLQYLHG 164
+V A Y + +C V+ M G L F + + E A + GL+ LH
Sbjct: 246 VVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
+I++ D+KP N+L++ G ++I+D G++ V E G+ +GT
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE---------------GQTIKGRVGTV 349
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGE 284
YM+PE V +ER Y F+ D W+LG ++ E + G P +K + E
Sbjct: 350 GYMAPEVVKNER----YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------E 398
Query: 285 RL--EMPETA----SPEFRRFVRSCLEKDWRKR-----GTVEELLAYPFVTK 325
RL E+PE SP+ R L KD +R G+ E+ +P K
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 80.9 bits (198), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/289 (25%), Positives = 127/289 (43%), Gaps = 34/289 (11%)
Query: 35 TSNPTSP---DVENI--SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR 89
+S P P D I LK LG G G V+ + K + A+K + S ++
Sbjct: 171 SSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEA 229
Query: 90 HQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS 149
A EA ++K L +VK HAV + I + E M +GSL D L+ + + +
Sbjct: 230 FLA--EANVMKTLQHDKLVKLHAV--VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 285
Query: 150 GVAY--RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
+ + ++ +G+ ++ IH D++ +N+L++ KIADFG++R++E+
Sbjct: 286 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYT----- 340
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIG 266
A + +PE ++ G + DVWS G++++E + G P G
Sbjct: 341 --------AREGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLMEIVTYGRIPYPG 388
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVE 315
P+ +I A+ G R+ PE E + C + +R T E
Sbjct: 389 MS-NPE---VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFE 433
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 127/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG++R++E+ E
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLARVLEDD--------------PE 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/292 (27%), Positives = 132/292 (45%), Gaps = 42/292 (14%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA--HEAEILKRLDSQF 106
++ VLG G G V + + + +YA K L + +A +E +IL++++S+F
Sbjct: 186 FRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRF 245
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSL-FDSLRV-RKKLSEDVISGVAYRVLKGLQYLHG 164
+V A Y + +C V+ M G L F + + E A + GL+ LH
Sbjct: 246 VVSL-AYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFPEARAVFYAAEICCGLEDLHR 304
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
+I++ D+KP N+L++ G ++I+D G++ V E G+ +GT
Sbjct: 305 ERIVYRDLKPENILLDDHGHIRISDLGLAVHVPE---------------GQTIKGRVGTV 349
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGE 284
YM+PE V +ER Y F+ D W+LG ++ E + G P +K + E
Sbjct: 350 GYMAPEVVKNER----YTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKREEV-------E 398
Query: 285 RL--EMPETA----SPEFRRFVRSCLEKDWRKR-----GTVEELLAYPFVTK 325
RL E+PE SP+ R L KD +R G+ E+ +P K
Sbjct: 399 RLVKEVPEEYSERFSPQARSLCSQLLCKDPAERLGCRGGSAREVKEHPLFKK 450
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAH-EAEILKRLDSQFIVKCH 111
VLG G G V+ + + + +YA K LN + +Q A E +IL ++ S+FIV
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 112 AVFYTIEGEICFVMEHMERGSL----FDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
F T + ++C VM M G + ++ E +++ GL++LH I
Sbjct: 252 YAFET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
I+ D+KP N+L++ G V+I+D G++ ++ + GT +M
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--------------GYAGTPGFM 356
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLE 287
+PE + G +Y F+ D ++LGV + E + P GEK + L + + +
Sbjct: 357 APELL----LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVT 411
Query: 288 MPETASPEFRRFVRSCLEKDWRKR-----GTVEELLAYP 321
P+ SP + F + L+KD KR G+ + L +P
Sbjct: 412 YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 127/272 (46%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 24 LKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 80
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 81 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 138
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 139 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------------AREGAKFPIKW 185
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G +I + G R
Sbjct: 186 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP----EVIQNLERGYR 237
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 238 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 269
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 126/288 (43%), Gaps = 38/288 (13%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLN----TTSSTIIRHQAAHEAEILKRLDSQFIVK 109
V+G G +V + ++++ +A+K+++ T+S + EA I L IV+
Sbjct: 31 VIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK----LSEDVISGVAYRVLKGLQYLHGM 165
Y+ +G + V E M+ L + R SE V S ++L+ L+Y H
Sbjct: 91 LLET-YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 166 QIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
IIH D+KP N+L+ K VK+ DFGV+ + E+ G A +G
Sbjct: 150 NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGES--------------GLVAGGRVG 195
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE V E YG DVW GV++ L G P G E+ L I
Sbjct: 196 TPHFMAPEVVKRE----PYGKPVDVWGCGVILFILLSGCLPFYGTKER-----LFEGIIK 246
Query: 283 GERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
G+ P S + VR L D +R TV E L +P++ +R
Sbjct: 247 GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD 294
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ ++ + +
Sbjct: 32 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHVNILLFM 86
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ ++ V + E SL+ L + K + +A + +G+ YLH IIH D+
Sbjct: 87 GYSTAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 146
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ E++R G+ +M+PE +
Sbjct: 147 KSNNIFLHEDNTVKIGDFGLA--TEKSRWSGSHQFEQLS----------GSILWMAPEVI 194
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 195 RMQD-SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 253
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R + +LA
Sbjct: 254 CPKRMKRLMAECLKKKRDERPSFPRILA 281
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 26/264 (9%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAH-EAEILKRLDSQFIVKCH 111
VLG G G V+ + + + +YA K LN + +Q A E +IL ++ S+FIV
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 112 AVFYTIEGEICFVMEHMERGSL----FDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
F T + ++C VM M G + ++ E +++ GL++LH I
Sbjct: 252 YAFET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
I+ D+KP N+L++ G V+I+D G++ ++ + GT +M
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--------------GYAGTPGFM 356
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLE 287
+PE + G +Y F+ D ++LGV + E + P GEK + L + + +
Sbjct: 357 APELL----LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVT 411
Query: 288 MPETASPEFRRFVRSCLEKDWRKR 311
P+ SP + F + L+KD KR
Sbjct: 412 YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 157 ASGMKYLSDMGAVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 128/279 (45%), Gaps = 31/279 (11%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAH-EAEILKRLDSQFIVKCH 111
VLG G G V+ + + + +YA K LN + +Q A E +IL ++ S+FIV
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 112 AVFYTIEGEICFVMEHMERGSL----FDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
F T + ++C VM M G + ++ E +++ GL++LH I
Sbjct: 252 YAFET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
I+ D+KP N+L++ G V+I+D G++ ++ + GT +M
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--------------GYAGTPGFM 356
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLE 287
+PE + G +Y F+ D ++LGV + E + P GEK + L + + +
Sbjct: 357 APELL----LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVT 411
Query: 288 MPETASPEFRRFVRSCLEKDWRKR-----GTVEELLAYP 321
P+ SP + F + L+KD KR G+ + L +P
Sbjct: 412 YPDKFSPASKDFCEALLQKDPEKRLGFRDGSCDGLRTHP 450
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/264 (26%), Positives = 122/264 (46%), Gaps = 26/264 (9%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAH-EAEILKRLDSQFIVKCH 111
VLG G G V+ + + + +YA K LN + +Q A E +IL ++ S+FIV
Sbjct: 192 VLGRGGFGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLA 251
Query: 112 AVFYTIEGEICFVMEHMERGSL----FDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
F T + ++C VM M G + ++ E +++ GL++LH I
Sbjct: 252 YAFET-KTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTAQIVSGLEHLHQRNI 310
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
I+ D+KP N+L++ G V+I+D G++ ++ + GT +M
Sbjct: 311 IYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTK--------------GYAGTPGFM 356
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLE 287
+PE + G +Y F+ D ++LGV + E + P GEK + L + + +
Sbjct: 357 APELL----LGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKELKQRV-LEQAVT 411
Query: 288 MPETASPEFRRFVRSCLEKDWRKR 311
P+ SP + F + L+KD KR
Sbjct: 412 YPDKFSPASKDFCEALLQKDPEKR 435
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 80.1 bits (196), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 121/281 (43%), Gaps = 35/281 (12%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAHEAEILKRLDSQF 106
DL +G G+ G V++ S+ A+K+L R ++ E I+KRL
Sbjct: 38 DLNIKEKIGAGSFGTVHRAEWHGSD--VAVKILMEQDFHAERVNEFLREVAIMKRLRHPN 95
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLR---VRKKLSEDVISGVAYRVLKGLQYLH 163
IV T + V E++ RGSL+ L R++L E +AY V KG+ YLH
Sbjct: 96 IVLFMGAV-TQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERRRLSMAYDVAKGMNYLH 154
Query: 164 GMQ--IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
I+H D+K NLL++ K VK+ DFG+SR+ +
Sbjct: 155 NRNPPIVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFL--------------XSKXAA 200
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC 281
GT +M+PE + E DV+S GV++ E P ++ A+
Sbjct: 201 GTPEWMAPEVLRDE----PSNEKSDVYSFGVILWELATLQQPWGNLNPA----QVVAAVG 252
Query: 282 FG-ERLEMPETASPEFRRFVRSCLEKDWRKR---GTVEELL 318
F +RLE+P +P+ + C + KR T+ +LL
Sbjct: 253 FKCKRLEIPRNLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 75/151 (49%), Gaps = 19/151 (12%)
Query: 118 EGEICF--VMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPS 175
E + C+ VME++E +L + + LS D ++L G+++ H M+I+H DIKP
Sbjct: 81 EEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQILDGIKHAHDMRIVHRDIKPQ 140
Query: 176 NLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSE 235
N+LI+ +KI DFG+++ + ET +GT Y SPE+ E
Sbjct: 141 NILIDSNKTLKIFDFGIAKALSETSLTQTNH-------------VLGTVQYFSPEQAKGE 187
Query: 236 RWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
D++S+G+V+ E LVG P G
Sbjct: 188 ATDE----CTDIYSIGIVLYEMLVGEPPFNG 214
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 83/148 (56%), Gaps = 6/148 (4%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
+KL +G G G V+K ++++++ I ALK V + A E +LK L + IV
Sbjct: 5 EKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIV 64
Query: 109 KCHAVFYTIEGEICFVMEHMERG--SLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+ H V ++ + ++ V E ++ FDS L +++ +++LKGL + H
Sbjct: 65 RLHDVLHS-DKKLTLVFEFCDQDLKKYFDS--CNGDLDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSR 194
++H D+KP NLLIN GE+K+A+FG++R
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLAR 149
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 37 NPTS--PDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH 94
NP S D +I + + + LG G+ G V H + ALK++N Q
Sbjct: 1 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 60
Query: 95 EAEI--LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E EI L+ L I+K + V + + EI V+E+ LFD + R K+SE
Sbjct: 61 EREISYLRLLRHPHIIKLYDVIKS-KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFF 118
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXX 212
+++ ++Y H +I+H D+KP NLL++ VKIADFG+S I+ +
Sbjct: 119 QQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-------------- 164
Query: 213 IGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
G G+ Y +PE + + + G DVWS GV++ L P
Sbjct: 165 -GNFLKTSCGSPNYAAPEVISGKLYAGP---EVDVWSCGVILYVMLCRRLPF 212
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 105/232 (45%), Gaps = 24/232 (10%)
Query: 37 NPTS--PDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH 94
NP S D +I + + + LG G+ G V H + ALK++N Q
Sbjct: 2 NPKSSLADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRI 61
Query: 95 EAEI--LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E EI L+ L I+K + V + + EI V+E+ LFD + R K+SE
Sbjct: 62 EREISYLRLLRHPHIIKLYDVIKS-KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFF 119
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXX 212
+++ ++Y H +I+H D+KP NLL++ VKIADFG+S I+ +
Sbjct: 120 QQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD-------------- 165
Query: 213 IGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
G G+ Y +PE + + + G DVWS GV++ L P
Sbjct: 166 -GNFLKTSCGSPNYAAPEVISGKLYAGP---EVDVWSCGVILYVMLCRRLPF 213
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 15 LKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 71
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 72 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------------AREGAKFPIKW 176
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G P+ +I + G R
Sbjct: 177 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPE---VIQNLERGYR 228
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 87/321 (27%), Positives = 131/321 (40%), Gaps = 53/321 (16%)
Query: 24 HQFRRRRHHF----------PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNS 73
HQ + RR F P +P+ P+ ++L+ LGHG+ G V+KVR ++
Sbjct: 24 HQLQPRRVSFRGEASETLQSPGYDPSRPESFFQQSFQRLSRLGHGSYGEVFKVRSKEDGR 83
Query: 74 IYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIE-----GEICFVMEHM 128
+YA+K S + R A L + S V H +E G I ++ +
Sbjct: 84 LYAVK----RSMSPFRG-PKDRARKLAEVGSHEKVGQHPCCVRLEQAWEEGGILYLQTEL 138
Query: 129 ERGSLFDSLRV-RKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKI 187
SL L E + G L L +LH ++H D+KP+N+ + +G K+
Sbjct: 139 CGPSLQQHCEAWGASLPEAQVWGYLRDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKL 198
Query: 188 ADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM--GTCAYMSPERVDSERWGGDYGFAG 245
DFG+ +VE +G A + G YM+PE + G YG A
Sbjct: 199 GDFGL--LVE---------------LGTAGAGEVQEGDPRYMAPELLQ-----GSYGTAA 236
Query: 246 DVWSLGVVVLECLVG-HYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCL 304
DV+SLG+ +LE P G G + + E S E R + L
Sbjct: 237 DVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPP-------EFTAGLSSELRSVLVMML 289
Query: 305 EKDWRKRGTVEELLAYPFVTK 325
E D + R T E LLA P + +
Sbjct: 290 EPDPKLRATAEALLALPVLRQ 310
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 17 LKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 73
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 74 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 131
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 132 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------------AREGAKFPIKW 178
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G P+ +I + G R
Sbjct: 179 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPE---VIQNLERGYR 230
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 231 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 262
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ ++ + +
Sbjct: 20 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHVNILLFM 74
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + K + +A + +G+ YLH IIH D+
Sbjct: 75 GYSTKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTARGMDYLHAKSIIHRDL 134
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ + ++R G+ +M+PE +
Sbjct: 135 KSNNIFLHEDNTVKIGDFGLATV--KSRWSGSHQFEQLS----------GSILWMAPEVI 182
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 183 RMQD-SNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMVGRGSLSPDLSKVRSN 241
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R + +LA
Sbjct: 242 CPKRMKRLMAECLKKKRDERPSFPRILA 269
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 126/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 43 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 98
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E+ME GSL DS + VI G+ +
Sbjct: 99 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEYMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 156
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+ R++E+ E
Sbjct: 157 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDP--------------E 202
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 203 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 251
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 252 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 302
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 16 LKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 72
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 73 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 130
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 131 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------------AREGAKFPIKW 177
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G P+ +I + G R
Sbjct: 178 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPE---VIQNLERGYR 229
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 230 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 261
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 15 LKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 71
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 72 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-------------AREGAKFPIKW 176
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G P+ +I + G R
Sbjct: 177 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPE---VIQNLERGYR 228
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
L+ + LG+G G V+ + N+ A+K L T+ EA+I+K+L +V
Sbjct: 11 LQLIKRLGNGQFGEVW-MGTWNGNTKVAIKTLK--PGTMSPESFLEEAQIMKKLKHDKLV 67
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV E I V E+M +GSL D L+ + L + +A +V G+ Y+ M
Sbjct: 68 QLYAV--VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKLPNLVDMAAQVAAGMAYIERMN 125
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L+ KIADFG++R++E+ A +
Sbjct: 126 YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXT-------------ARQGAKFPIKW 172
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE G + DVWS G+++ E + G P G + ++ + G R
Sbjct: 173 TAPEAALY----GRFTIKSDVWSFGILLTELVTKGRVPYPGMNNR----EVLEQVERGYR 224
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ P+ + C +KD +R T E L ++
Sbjct: 225 MPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSF 259
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 15 LKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 71
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 72 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 129
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 130 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEXT-------------AREGAKFPIKW 176
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G P+ +I + G R
Sbjct: 177 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPE---VIQNLERGYR 228
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 229 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 260
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 113/274 (41%), Gaps = 40/274 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLN-------TTSSTIIRHQAAHEAEILKRLDSQFI 107
+G GN G+ +R ++SN + A+K + II H++ I+ R +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIV-RFKEVIL 85
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
H + VME+ G LF+ + + SED +++ G+ Y H MQ+
Sbjct: 86 TPTH---------LAIVMEYASGGELFERICNAGRFSEDEARFFFQQLISGVSYCHAMQV 136
Query: 168 IHGDIKPSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+K N L++G +KI FG S+ + +GT A
Sbjct: 137 CHRDLKLENTLLDGSPAPRLKICAFGYSK---------------SSVLHSQPKDTVGTPA 181
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
Y++PE + + + G DVWS GV + LVG YP E + I I +
Sbjct: 182 YIAPEVLLKKEYDGK---VADVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTIHRI-LNVQ 237
Query: 286 LEMPETA--SPEFRRFVRSCLEKDWRKRGTVEEL 317
+P+ SPE R + D KR ++ E+
Sbjct: 238 YAIPDYVHISPECRHLISRIFVADPAKRISIPEI 271
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 26/251 (10%)
Query: 41 PDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEIL 99
P + +S +KL +G G G V+K RH+K+ ALK VL A E +IL
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 100 KRLDSQFIVKCHAVFYT-------IEGEICFVMEHMER--GSLFDSLRVRKKLSEDVISG 150
+ L + +V + T +G I V + E L ++ V+ LSE I
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKR 129
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
V +L GL Y+H +I+H D+K +N+LI G +K+ADFG++R +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
T Y PE + ER DYG D+W G ++ E + P++ +
Sbjct: 190 VV----------TLWYRPPELLLGER---DYGPPIDLWGAGCIMAE-MWTRSPIMQGNTE 235
Query: 271 PDLMALICAIC 281
+ALI +C
Sbjct: 236 QHQLALISQLC 246
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 126/291 (43%), Gaps = 44/291 (15%)
Query: 42 DVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
D NIS K V+G G G V K+ +K S+ A+K L + R EA
Sbjct: 14 DATNISIDK---VVGAGEFGEVCSGRLKLPSKKEISV-AIKTLKVGYTEKQRRDFLGEAS 69
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRV 155
I+ + D I++ V T + V E ME GSL DS + VI G+ +
Sbjct: 70 IMGQFDHPNIIRLEGVV-TKSKPVMIVTEXMENGSL-DSFLRKHDAQFTVIQLVGMLRGI 127
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G++YL M +H D+ N+LIN K++DFG+SR++E+ E
Sbjct: 128 ASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PE 173
Query: 216 AAIACMG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP- 271
AA G + SPE + + + A DVWS G+V+ E ++ +GE+P
Sbjct: 174 AAYTTRGGKIPIRWTSPEAIAYRK----FTSASDVWSYGIVLWE-------VMSYGERPY 222
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I A+ G RL P + + C +KD R E++++
Sbjct: 223 WEMSNQDVIKAVDEGYRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVS 273
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/272 (25%), Positives = 128/272 (47%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 10 LKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 66
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 67 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 124
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D++ +N+L++ KIADFG++R++E+ A +
Sbjct: 125 YIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYT-------------AREGAKFPIKW 171
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G P+ +I + G R
Sbjct: 172 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGMT-NPE---VIQNLERGYR 223
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 224 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 255
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 26/251 (10%)
Query: 41 PDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEIL 99
P + +S +KL +G G G V+K RH+K+ ALK VL A E +IL
Sbjct: 11 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 70
Query: 100 KRLDSQFIVKCHAVFYT-------IEGEICFVMEHMER--GSLFDSLRVRKKLSEDVISG 150
+ L + +V + T +G I V + E L ++ V+ LSE I
Sbjct: 71 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKR 128
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
V +L GL Y+H +I+H D+K +N+LI G +K+ADFG++R +
Sbjct: 129 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 188
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
T Y PE + ER DYG D+W G ++ E + P++ +
Sbjct: 189 VV----------TLWYRPPELLLGER---DYGPPIDLWGAGCIMAE-MWTRSPIMQGNTE 234
Query: 271 PDLMALICAIC 281
+ALI +C
Sbjct: 235 QHQLALISQLC 245
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/236 (25%), Positives = 106/236 (44%), Gaps = 26/236 (11%)
Query: 36 SNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHE 95
N + D ++D L VLG G+ G V + ++ +YA+K+L +I+
Sbjct: 9 DNNGNRDRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK--KDVVIQDDDVEC 66
Query: 96 AEILKRL-----DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISG 150
+ KR+ F+ + H+ F T++ + FVME++ G L ++ + E
Sbjct: 67 TMVEKRVLALPGKPPFLTQLHSCFQTMD-RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVF 125
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
A + GL +L II+ D+K N++++ +G +KIADFG+ +
Sbjct: 126 YAAEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--------------EN 171
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
G GT Y++PE + + YG + D W+ GV++ E L G P G
Sbjct: 172 IWDGVTTKXFCGTPDYIAPEIIAYQ----PYGKSVDWWAFGVLLYEMLAGQAPFEG 223
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 61/233 (26%), Positives = 105/233 (45%), Gaps = 26/233 (11%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
D ++D L VLG G+ G V + ++ +YA+K+L +I+ + KR
Sbjct: 336 DRMKLTDFNFLMVLGKGSFGKVMLSERKGTDELYAVKILK--KDVVIQDDDVECTMVEKR 393
Query: 102 L-----DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+ F+ + H+ F T++ + FVME++ G L ++ + E A +
Sbjct: 394 VLALPGKPPFLTQLHSCFQTMD-RLYFVMEYVNGGDLMYHIQQVGRFKEPHAVFYAAEIA 452
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
GL +L II+ D+K N++++ +G +KIADFG+ + G
Sbjct: 453 IGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCK--------------ENIWDGVT 498
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGE 269
GT Y++PE + + YG + D W+ GV++ E L G P G E
Sbjct: 499 TKXFCGTPDYIAPEIIAYQ----PYGKSVDWWAFGVLLYEMLAGQAPFEGEDE 547
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 122/299 (40%), Gaps = 32/299 (10%)
Query: 36 SNPTSPDVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQ 91
P P V + LKK+ LG G+ G V Y + + + A+K L + R
Sbjct: 20 QGPGDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSG 79
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISG 150
E +IL+ L + I+K + VME++ GSL D L R + +
Sbjct: 80 WKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLP-RHSIGLAQLLL 138
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
A ++ +G+ YLH IH D+ N+L++ VKI DFG+++ V E
Sbjct: 139 FAQQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGD 198
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYP--- 263
+ A C+ + +A DVWS GV + E C P
Sbjct: 199 SPVFWYAPECLKEYKFY---------------YASDVWSFGVTLYELLTHCDSSQSPPTK 243
Query: 264 ---LIGFGE-KPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
LIG + + ++ L + GERL P+ E +++C E + R T E L+
Sbjct: 244 FLELIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENLI 302
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 112/251 (44%), Gaps = 26/251 (10%)
Query: 41 PDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEIL 99
P + +S +KL +G G G V+K RH+K+ ALK VL A E +IL
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 100 KRLDSQFIVKCHAVFYT-------IEGEICFVMEHMER--GSLFDSLRVRKKLSEDVISG 150
+ L + +V + T +G I V + E L ++ V+ LSE I
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLSE--IKR 129
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
V +L GL Y+H +I+H D+K +N+LI G +K+ADFG++R +
Sbjct: 130 VMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNR 189
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
T Y PE + ER DYG D+W G ++ E + P++ +
Sbjct: 190 VV----------TLWYRPPELLLGER---DYGPPIDLWGAGCIMAE-MWTRSPIMQGNTE 235
Query: 271 PDLMALICAIC 281
+ALI +C
Sbjct: 236 QHQLALISQLC 246
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 29/265 (10%)
Query: 68 HQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEH 127
H+ +N YA+KV++ + + + E EIL R + Y + V E
Sbjct: 48 HKATNMEYAVKVIDKS-----KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTEL 102
Query: 128 MERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI---NGKGE 184
M G L D + +K SE S V + + K ++YLH ++H D+KPSN+L +G E
Sbjct: 103 MRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPE 162
Query: 185 -VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGF 243
++I DFG ++ + G C T +++PE + +R G D G
Sbjct: 163 CLRICDFGFAKQLRAEN-------------GLLMTPCY-TANFVAPEVL--KRQGYDEGC 206
Query: 244 AGDVWSLGVVVLECLVGHYPLI-GFGEKP-DLMALICAICFGERLEMPETASPEFRRFVR 301
D+WSLG+++ L G+ P G + P +++ I + F T S + V
Sbjct: 207 --DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVS 264
Query: 302 SCLEKDWRKRGTVEELLAYPFVTKR 326
L D +R T +++L +P+VT++
Sbjct: 265 KMLHVDPHQRLTAKQVLQHPWVTQK 289
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/278 (26%), Positives = 123/278 (44%), Gaps = 35/278 (12%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
+G G+ + + H+ +N +A+K+++ + + E EIL R +
Sbjct: 30 IGVGSYSVCKRCIHKATNMEFAVKIIDKS-----KRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 115 YTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKP 174
Y + V E M+ G L D + +K SE S V + + K ++YLH ++H D+KP
Sbjct: 85 YDDGKYVYVVTELMKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKP 144
Query: 175 SNLLI---NGKGE-VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
SN+L +G E ++I DFG ++ + G C T +++PE
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAEN-------------GLLMTPCY-TANFVAPE 190
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPD-----LMALICAICFGER 285
+ ER G Y A D+WSLGV++ L G+ P F PD ++A I + F
Sbjct: 191 VL--ERQG--YDAACDIWSLGVLLYTMLTGYTP---FANGPDDTPEEILARIGSGKFSLS 243
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
+ S + V L D +R T +L +P++
Sbjct: 244 GGYWNSVSDTAKDLVSKMLHVDPHQRLTAALVLRHPWI 281
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 79.0 bits (193), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 22/225 (9%)
Query: 42 DVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI--L 99
D +I + + + LG G+ G V H + ALK++N Q E EI L
Sbjct: 3 DGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYL 62
Query: 100 KRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ L I+K + V + + EI V+E+ LFD + R K+SE +++ +
Sbjct: 63 RLLRHPHIIKLYDVIKS-KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAV 120
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+Y H +I+H D+KP NLL++ VKIADFG+S I+ + G
Sbjct: 121 EYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---------------GNFLKT 165
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
G+ Y +PE + + + G DVWS GV++ L P
Sbjct: 166 SCGSPNYAAPEVISGKLYAGP---EVDVWSCGVILYVMLCRRLPF 207
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 22/222 (9%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI--LKRL 102
+I + + + LG G+ G V H + ALK++N Q E EI L+ L
Sbjct: 2 HIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLL 61
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
I+K + V + + EI V+E+ LFD + R K+SE +++ ++Y
Sbjct: 62 RHPHIIKLYDVIKS-KDEIIMVIEY-AGNELFDYIVQRDKMSEQEARRFFQQIISAVEYC 119
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H +I+H D+KP NLL++ VKIADFG+S I+ + G G
Sbjct: 120 HRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTD---------------GNFLKTSCG 164
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
+ Y +PE + + + G DVWS GV++ L P
Sbjct: 165 SPNYAAPEVISGKLYAGP---EVDVWSCGVILYVMLCRRLPF 203
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 122/265 (46%), Gaps = 29/265 (10%)
Query: 68 HQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEH 127
H+ +N YA+KV++ + + + E EIL R + Y + V E
Sbjct: 48 HKATNMEYAVKVIDKS-----KRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTEL 102
Query: 128 MERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI---NGKGE 184
M G L D + +K SE S V + + K ++YLH ++H D+KPSN+L +G E
Sbjct: 103 MRGGELLDKILRQKFFSEREASFVLHTIGKTVEYLHSQGVVHRDLKPSNILYVDESGNPE 162
Query: 185 -VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGF 243
++I DFG ++ + G C T +++PE + +R G D G
Sbjct: 163 CLRICDFGFAKQLRAEN-------------GLLMTPCY-TANFVAPEVL--KRQGYDEGC 206
Query: 244 AGDVWSLGVVVLECLVGHYPLI-GFGEKP-DLMALICAICFGERLEMPETASPEFRRFVR 301
D+WSLG+++ L G+ P G + P +++ I + F T S + V
Sbjct: 207 --DIWSLGILLYTMLAGYTPFANGPSDTPEEILTRIGSGKFTLSGGNWNTVSETAKDLVS 264
Query: 302 SCLEKDWRKRGTVEELLAYPFVTKR 326
L D +R T +++L +P+VT++
Sbjct: 265 KMLHVDPHQRLTAKQVLQHPWVTQK 289
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/296 (26%), Positives = 120/296 (40%), Gaps = 32/296 (10%)
Query: 39 TSPDVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAH 94
+ P V + LKK+ LG G+ G V Y + + + A+K L +R
Sbjct: 1 SDPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQR 60
Query: 95 EAEILKRLDSQFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY 153
E EIL+ L + IVK E + VME++ GSL D L R + + A
Sbjct: 61 EIEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQ 119
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
++ +G+ YLH IH + N+L++ VKI DFG+++ V E +
Sbjct: 120 QICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPV 179
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYPLIGFGE 269
A C+ C + +A DVWS GV + E C P F E
Sbjct: 180 FWYAPECLKECKFY---------------YASDVWSFGVTLYELLTYCDSNQSPHTKFTE 224
Query: 270 -------KPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ ++ L + GERL P+ E +++C E + R T + L+
Sbjct: 225 LIGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 280
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 128/272 (47%), Gaps = 29/272 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LK + LG G G V+ + + ++ A+K L S + A EA ++K+L Q +V
Sbjct: 11 LKLVERLGAGQFGEVW-MGYYNGHTKVAVKSLKQGSMSPDAFLA--EANLMKQLQHQRLV 67
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHGMQ 166
+ +AV + I + E+ME GSL D L+ KL+ + + +A ++ +G+ ++
Sbjct: 68 RLYAV--VTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAAQIAEGMAFIEERN 125
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH +++ +N+L++ KIADFG++R++E+ A +
Sbjct: 126 YIHRNLRAANILVSDTLSCKIADFGLARLIEDNEYT-------------AREGAKFPIKW 172
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGER 285
+PE ++ G + DVWS G+++ E + G P G P+ +I + G R
Sbjct: 173 TAPEAINY----GTFTIKSDVWSFGILLTEIVTHGRIPYPGM-TNPE---VIQNLERGYR 224
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P+ E + +R C ++ R T + L
Sbjct: 225 MVRPDNCPEELYQLMRLCWKERPEDRPTFDYL 256
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/310 (25%), Positives = 131/310 (42%), Gaps = 53/310 (17%)
Query: 44 ENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEILKRL 102
+++ + L ++G G+ G+V K R++ + I A+K L + +++ A E ++LK+L
Sbjct: 22 QSMEKYENLGLVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQL 81
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ +V V + V E ++ L D L V+ ++++ G+ +
Sbjct: 82 RHENLVNLLEVCKK-KKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYLFQIINGIGFC 140
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H IIH DIKP N+L++ G VK+ DFG +R + GE +
Sbjct: 141 HSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAP--------------GEVYDDEVA 186
Query: 223 TCAYMSPERVDSERWGGD--YGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
T Y +PE + GD YG A DVW++G +V E +G PL D + I +
Sbjct: 187 TRWYRAPELL-----VGDVKYGKAVDVWAIGCLVTEMFMGE-PLFPGDSDIDQLYHI-MM 239
Query: 281 CFGERL----------------EMPETA--SPEFRRF----------VRSCLEKDWRKRG 312
C G + +PE P RR+ + CL D KR
Sbjct: 240 CLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRP 299
Query: 313 TVEELLAYPF 322
ELL + F
Sbjct: 300 FCAELLHHDF 309
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 114/256 (44%), Gaps = 36/256 (14%)
Query: 41 PDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEIL 99
P + +S +KL +G G G V+K RH+K+ ALK VL A E +IL
Sbjct: 12 PFCDEVSKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKIL 71
Query: 100 KRLDSQFIV--------------KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE 145
+ L + +V +C A Y + + C EH + L ++ V+ LSE
Sbjct: 72 QLLKHENVVNLIEICRTKASPYNRCKASIYLV-FDFC---EH-DLAGLLSNVLVKFTLSE 126
Query: 146 DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXX 205
I V +L GL Y+H +I+H D+K +N+LI G +K+ADFG++R +
Sbjct: 127 --IKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPN 184
Query: 206 XXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI 265
T Y PE + ER DYG D+W G ++ E + P++
Sbjct: 185 RYXNRVV----------TLWYRPPELLLGER---DYGPPIDLWGAGCIMAE-MWTRSPIM 230
Query: 266 GFGEKPDLMALICAIC 281
+ +ALI +C
Sbjct: 231 QGNTEQHQLALISQLC 246
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 134/302 (44%), Gaps = 34/302 (11%)
Query: 35 TSNPTSPDVENISDLKKLTV--LGHGNGGIVYKVRHQKSNSIYALKVLNTTS-STIIRHQ 91
T N +EN ++ LT LG G +V + + + YA K L R +
Sbjct: 15 TENLYFQSMENFNNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAE 74
Query: 92 AAHEAEILKRLDS-QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSL--RVRKKLSEDVI 148
HE +L+ S ++ H V Y EI ++E+ G +F + + +SE+ +
Sbjct: 75 ILHEIAVLELAKSCPRVINLHEV-YENTSEIILILEYAAGGEIFSLCLPELAEMVSENDV 133
Query: 149 SGVAYRVLKGLQYLHGMQIIHGDIKPSNLLING---KGEVKIADFGVSRIVEETRXXXXX 205
+ ++L+G+ YLH I+H D+KP N+L++ G++KI DFG+SR
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSR----------- 182
Query: 206 XXXXXXXIGEAAI--ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
IG A MGT Y++PE ++ + A D+W++G++ L P
Sbjct: 183 ------KIGHACELREIMGTPEYLAPEILNYDPITT----ATDMWNIGIIAYMLLTHTSP 232
Query: 264 LIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
+G + + I + E + S F++S L K+ KR T E L++ ++
Sbjct: 233 FVGEDNQETYLN-ISQVNVDYSEETFSSVSQLATDFIQSLLVKNPEKRPTAEICLSHSWL 291
Query: 324 TK 325
+
Sbjct: 292 QQ 293
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 126/268 (47%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ ++ + +
Sbjct: 36 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHVNILLFM 90
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV-ISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + + E + + +A + +G+ YLH IIH D+
Sbjct: 91 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 150
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ E++R G+ +M+PE +
Sbjct: 151 KSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLS----------GSILWMAPEVI 198
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 199 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 257
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 258 CPKAMKRLMAECLKKKRDERPLFPQILA 285
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G+V++V + + + +A K + T + + E + + L +V H F
Sbjct: 59 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-KETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 115 YTIEGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
+ E+ + E M G LF+ + K+SED +V KGL ++H +H D+K
Sbjct: 118 ED-DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 176
Query: 174 PSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPER 231
P N++ K E+K+ DFG++ ++ ++ GT + +PE
Sbjct: 177 PENIMFTTKRSNELKLIDFGLTAHLDPK---------------QSVKVTTGTAEFAAPEV 221
Query: 232 VDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
+ G G+ D+WS+GV+ L G P GE D C M ++
Sbjct: 222 AE----GKPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVKSC---DWNMDDS 272
Query: 292 A----SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
A S + + F+R L D R T+ + L +P++T
Sbjct: 273 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 309
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ I+
Sbjct: 16 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV-ISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + + E + + +A + +G+ YLH IIH D+
Sbjct: 72 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ E++R G+ +M+PE +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLS----------GSILWMAPEVI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 179 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ ++ + +
Sbjct: 44 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHVNILLFM 98
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRV-RKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + K + +A + +G+ YLH IIH D+
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ E++R G+ +M+PE +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLA--TEKSRWSGSHQFEQLS----------GSILWMAPEVI 206
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 207 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 266 CPKAMKRLMAECLKKKRDERPLFPQILA 293
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 77/295 (26%), Positives = 119/295 (40%), Gaps = 32/295 (10%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHE 95
P V + LKK+ LG G+ G V Y + + + A+K L +R E
Sbjct: 1 DPTVFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQRE 60
Query: 96 AEILKRLDSQFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
EIL+ L + IVK E + VME++ GSL D L R + + A +
Sbjct: 61 IEILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYL-PRHCVGLAQLLLFAQQ 119
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
+ +G+ YLH IH + N+L++ VKI DFG+++ V E +
Sbjct: 120 ICEGMAYLHAQHYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVF 179
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYPLIGFGE- 269
A C+ C + +A DVWS GV + E C P F E
Sbjct: 180 WYAPECLKECKFY---------------YASDVWSFGVTLYELLTYCDSNQSPHTKFTEL 224
Query: 270 ------KPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ ++ L + GERL P+ E +++C E + R T + L+
Sbjct: 225 IGHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNLV 279
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 77/297 (25%), Positives = 123/297 (41%), Gaps = 33/297 (11%)
Query: 38 PTSPDVENISDLKKLTVLGHGNGGIVYKVRHQ----KSNSIYALKVLNTTSSTIIRHQAA 93
P P + LK ++ LG GN G V R+ + ++ A+K L + R
Sbjct: 2 PQDPTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-DFQ 60
Query: 94 HEAEILKRLDSQFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGV 151
E +ILK L S FIVK V Y + VME++ G L D L R R +L +
Sbjct: 61 REIQILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLY 120
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+ ++ KG++YL + +H D+ N+L+ + VKIADFG+++++ +
Sbjct: 121 SSQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP--- 177
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYPLIGF 267
G++ I + +PE + + DVWS GVV+ E C P F
Sbjct: 178 --GQSPI------FWYAPESLSD----NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEF 225
Query: 268 GEKPDLMALICAIC-------FGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ A+C G+RL P E ++ C + R + L
Sbjct: 226 LRMMGCERDVPALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 282
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 70/277 (25%), Positives = 121/277 (43%), Gaps = 33/277 (11%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G+V++V + + + +A K + T + + E + + L +V H F
Sbjct: 165 LGTGAFGVVHRVTERATGNNFAAKFVMTPHESD-KETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 115 YTIEGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
+ E+ + E M G LF+ + K+SED +V KGL ++H +H D+K
Sbjct: 224 ED-DNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGLCHMHENNYVHLDLK 282
Query: 174 PSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPER 231
P N++ K E+K+ DFG++ ++ ++ GT + +PE
Sbjct: 283 PENIMFTTKRSNELKLIDFGLTAHLDPK---------------QSVKVTTGTAEFAAPEV 327
Query: 232 VDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
+ G G+ D+WS+GV+ L G P GE D C M ++
Sbjct: 328 AE----GKPVGYYTDMWSVGVLSYILLSGLSPF--GGENDDETLRNVKSC---DWNMDDS 378
Query: 292 A----SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVT 324
A S + + F+R L D R T+ + L +P++T
Sbjct: 379 AFSGISEDGKDFIRKLLLADPNTRMTIHQALEHPWLT 415
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 101/224 (45%), Gaps = 26/224 (11%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL--- 102
I + + + VLG G+ G V R +++ +YA+KVL I++ KR+
Sbjct: 22 IDNFEFIRVLGKGSFGKVMLARVKETGDLYAVKVLK--KDVILQDDDVECTMTEKRILSL 79
Query: 103 --DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQ 160
+ F+ + F T + + FVME + G L ++ ++ E A ++ L
Sbjct: 80 ARNHPFLTQLFCCFQTPD-RLFFVMEFVNGGDLMFHIQKSRRFDEARARFYAAEIISALM 138
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
+LH II+ D+K N+L++ +G K+ADFG+ + G
Sbjct: 139 FLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCK--------------EGICNGVTTATF 184
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
GT Y++PE + YG A D W++GV++ E L GH P
Sbjct: 185 CGTPDYIAPEILQEML----YGPAVDWWAMGVLLYEMLCGHAPF 224
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 47 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 106
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + +++ H+ L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 107 NDIIRAPTIEQMKDVYLVTHLMGADLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 166 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 214
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 215 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 272 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 331
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 332 YLEQYYDPSD 341
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 137/294 (46%), Gaps = 36/294 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTI--IRHQAAHEAEILKRLDSQF 106
L +G G V++V ++K IYA+K +N + T+ R++ A+ ++ + D
Sbjct: 17 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK-- 73
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHG 164
I++ + Y I + +++ ME G++ + ++KK S D +Y +L+ + +H
Sbjct: 74 IIRLYD--YEITDQYIYMV--MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 129
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+KP+N LI G +K+ DFG++ ++ + +GT
Sbjct: 130 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD------------SQVGTV 176
Query: 225 AYMSPERV---DSERWGGDYGFAG----DVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
YM PE + S R G DVWSLG ++ G P + + L
Sbjct: 177 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH 234
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
I +E P+ + + ++ CL++D ++R ++ ELLA+P+V ++ N
Sbjct: 235 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 288
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 137/294 (46%), Gaps = 36/294 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTI--IRHQAAHEAEILKRLDSQF 106
L +G G V++V ++K IYA+K +N + T+ R++ A+ ++ + D
Sbjct: 33 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK-- 89
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHG 164
I++ + Y I + +++ ME G++ + ++KK S D +Y +L+ + +H
Sbjct: 90 IIRLYD--YEITDQYIYMV--MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+KP+N LI G +K+ DFG++ ++ + +GT
Sbjct: 146 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD------------SQVGTV 192
Query: 225 AYMSPERV---DSERWGGDYGFAG----DVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
YM PE + S R G DVWSLG ++ G P + + L
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH 250
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
I +E P+ + + ++ CL++D ++R ++ ELLA+P+V ++ N
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 137/294 (46%), Gaps = 36/294 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTI--IRHQAAHEAEILKRLDSQF 106
L +G G V++V ++K IYA+K +N + T+ R++ A+ ++ + D
Sbjct: 61 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK-- 117
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHG 164
I++ + Y I + +++ ME G++ + ++KK S D +Y +L+ + +H
Sbjct: 118 IIRLYD--YEITDQYIYMV--MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+KP+N LI G +K+ DFG++ ++ + +GT
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD------------SQVGTV 220
Query: 225 AYMSPERV---DSERWGGDYGFAG----DVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
YM PE + S R G DVWSLG ++ G P + + L
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH 278
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
I +E P+ + + ++ CL++D ++R ++ ELLA+P+V ++ N
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 332
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 30/267 (11%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G V HQ + A+K+LN S + + E + LK I+K +
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
V T + VME++ G LFD + ++ E + ++L + Y H ++H D+
Sbjct: 79 VIST-PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP N+L++ KIADFG+S ++ + GE G+ Y +PE +
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSD---------------GEFLRTSCGSPNYAAPEVI 182
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK--PDLMALICAICFGERLEMPE 290
+ G D+WS GV++ L G P F ++ P L I F +PE
Sbjct: 183 SGRLYAGP---EVDIWSCGVILYALLCGTLP---FDDEHVPTLFKKIRGGVF----YIPE 232
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ + L+ D KR T++++
Sbjct: 233 YLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 11 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 69
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 70 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 128
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 129 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 180
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 181 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 211
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 16 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 74
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 75 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 133
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 134 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 185
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 186 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 216
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 73
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 184
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 185 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 215
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 10 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 68
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ + K D I + Y ++ KG++Y
Sbjct: 69 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEY 127
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 128 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 179
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 180 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 210
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 137/294 (46%), Gaps = 36/294 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTI--IRHQAAHEAEILKRLDSQF 106
L +G G V++V ++K IYA+K +N + T+ R++ A+ ++ + D
Sbjct: 13 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK-- 69
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHG 164
I++ + Y I + +++ ME G++ + ++KK S D +Y +L+ + +H
Sbjct: 70 IIRLYD--YEITDQYIYMV--MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 125
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+KP+N LI G +K+ DFG++ ++ + +GT
Sbjct: 126 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD------------SQVGTV 172
Query: 225 AYMSPERV---DSERWGGDYGFAG----DVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
YM PE + S R G DVWSLG ++ G P + + L
Sbjct: 173 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH 230
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
I +E P+ + + ++ CL++D ++R ++ ELLA+P+V ++ N
Sbjct: 231 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 284
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 123/286 (43%), Gaps = 33/286 (11%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQ----KSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK ++ LG GN G V R+ + ++ A+K L + R E +ILK L S
Sbjct: 9 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-DFQREIQILKALHS 67
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYL 162
FIVK V Y E+ VME++ G L D L R R +L + + ++ KG++YL
Sbjct: 68 DFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 127
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+ +H D+ N+L+ + VKIADFG+++++ + G++ I
Sbjct: 128 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREP-----GQSPI---- 178
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYPLIGFGEKPDLMALIC 278
+ +PE + + DVWS GVV+ E C P F +
Sbjct: 179 --FWYAPESLSD----NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP 232
Query: 279 AIC-------FGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
A+C G+RL P E ++ C + R + L
Sbjct: 233 ALCRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 278
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 17 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 75
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 76 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 134
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 135 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 186
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 187 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 217
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/294 (25%), Positives = 139/294 (47%), Gaps = 36/294 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTI--IRHQAAHEAEILKRLDSQF 106
L +G G V++V ++K IYA+K +N + T+ R++ A+ ++ + D
Sbjct: 33 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK-- 89
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHG 164
I++ + Y I + +++ ME G++ + ++KK S D +Y +L+ + +H
Sbjct: 90 IIRLYD--YEITDQYIYMV--MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 145
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+KP+N LI G +K+ DFG++ ++ + +GT
Sbjct: 146 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDXXXVVKD------------SQVGTV 192
Query: 225 AYMSPERV---DSERWGGDYGFAG----DVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
YM PE + S R G DVWSLG ++ G P + + L
Sbjct: 193 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH 250
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
I +E P+ + + ++ CL++D ++R ++ ELLA+P+V ++ N
Sbjct: 251 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 304
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 70
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 129
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 181
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 182 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 212
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENIIGI 90
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 198
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 199 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 316 YLEQYYDPSD 325
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 137/294 (46%), Gaps = 36/294 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTI--IRHQAAHEAEILKRLDSQF 106
L +G G V++V ++K IYA+K +N + T+ R++ A+ ++ + D
Sbjct: 14 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDK-- 70
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHG 164
I++ + Y I + +++ ME G++ + ++KK S D +Y +L+ + +H
Sbjct: 71 IIRLYD--YEITDQYIYMV--MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 126
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+KP+N LI G +K+ DFG++ ++ + +GT
Sbjct: 127 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD------------SQVGTV 173
Query: 225 AYMSPERV---DSERWGGDYGFAG----DVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
YM PE + S R G DVWSLG ++ G P + + L
Sbjct: 174 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH 231
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSSN 331
I +E P+ + + ++ CL++D ++R ++ ELLA+P+V ++ N
Sbjct: 232 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYVQIQTHPVN 285
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 43 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 101
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 102 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 160
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 161 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 212
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 213 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 243
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 18 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 76
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 77 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 135
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 136 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 187
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 188 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 218
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 35/301 (11%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIR 89
P S+PT V + LKK+ LG G+ G V Y + + + A+K L R
Sbjct: 4 PASDPT---VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR 60
Query: 90 HQAAHEAEILKRLDSQFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVI 148
E +IL+ L + I+K E + VME++ GSL D L R + +
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQL 119
Query: 149 SGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXX 208
A ++ +G+ YLH IH ++ N+L++ VKI DFG+++ V E
Sbjct: 120 LLFAQQICEGMAYLHAQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 209 XXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYP- 263
+ A C+ + +A DVWS GV + E C P
Sbjct: 180 GDSPVFWYAPECLKEYKFY---------------YASDVWSFGVTLYELLTHCDSSQSPP 224
Query: 264 -----LIGFGE-KPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
LIG + + ++ L + GERL P+ E +++C E + R T E L
Sbjct: 225 TKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENL 284
Query: 318 L 318
+
Sbjct: 285 I 285
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 65
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 66 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
+ I H DIKP NLL++ + +KI+DFG++ + GT
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN------------KMXGTL 171
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 172 PYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 207
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 19 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 77
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 78 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 136
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 137 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 188
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 189 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 219
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 105/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V KS A+K L+ +II + + E +LK + + ++
Sbjct: 54 QTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 113
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 114 GLLDVFTPATSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 172
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 173 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 215
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + + W Y D+WS+G ++ E L G
Sbjct: 216 WYRAPEIMLN--WMH-YNMTVDIWSVGCIMAELLTG 248
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ I+
Sbjct: 18 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 73
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV-ISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + + E + + +A + +G+ YLH IIH D+
Sbjct: 74 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 132
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ + ++R G+ +M+PE +
Sbjct: 133 KSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS----------GSILWMAPEVI 180
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 181 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 239
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 240 CPKAMKRLMAECLKKKRDERPLFPQILA 267
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMXGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 70
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 129
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 181
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 182 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 212
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 122/278 (43%), Gaps = 35/278 (12%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
+G G+ + + H+ +N +A+K+++ + + E EIL R +
Sbjct: 30 IGVGSYSVCKRCIHKATNXEFAVKIIDKS-----KRDPTEEIEILLRYGQHPNIITLKDV 84
Query: 115 YTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKP 174
Y + V E + G L D + +K SE S V + + K ++YLH ++H D+KP
Sbjct: 85 YDDGKYVYVVTELXKGGELLDKILRQKFFSEREASAVLFTITKTVEYLHAQGVVHRDLKP 144
Query: 175 SNLLI---NGKGE-VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
SN+L +G E ++I DFG ++ + G C T +++PE
Sbjct: 145 SNILYVDESGNPESIRICDFGFAKQLRAEN-------------GLLXTPCY-TANFVAPE 190
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPD-----LMALICAICFGER 285
+ ER G Y A D+WSLGV++ L G+ P F PD ++A I + F
Sbjct: 191 VL--ERQG--YDAACDIWSLGVLLYTXLTGYTP---FANGPDDTPEEILARIGSGKFSLS 243
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
+ S + V L D +R T +L +P++
Sbjct: 244 GGYWNSVSDTAKDLVSKXLHVDPHQRLTAALVLRHPWI 281
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 133/286 (46%), Gaps = 36/286 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTIIRHQAAHEAEILKRLD--SQF 106
L +G G V++V ++K IYA+K +N + T+ ++ +E L +L S
Sbjct: 61 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHSDK 117
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHG 164
I++ + Y I + +++ ME G++ + ++KK S D +Y +L+ + +H
Sbjct: 118 IIRLYD--YEITDQYIYMV--MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+KP+N LI G +K+ DFG++ ++ + +GT
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD------------SQVGTV 220
Query: 225 AYMSPERV---DSERWGGDYGFAG----DVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
YM PE + S R G DVWSLG ++ G P + + L
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH 278
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
I +E P+ + + ++ CL++D ++R ++ ELLA+P+V
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/298 (25%), Positives = 119/298 (39%), Gaps = 64/298 (21%)
Query: 48 DLKKLT---VLGHGNGGIVYKV------------RHQKSNSIYALKVLNTTSSTIIRHQA 92
D +LT ++G G G VY+ RH I S TI
Sbjct: 5 DFAELTLEEIIGIGGFGKVYRAFWIGDEVAVKAARHDPDEDI---------SQTI--ENV 53
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
EA++ L I+ V E +C VME RG + + K++ D++ A
Sbjct: 54 RQEAKLFAMLKHPNIIALRGVCLK-EPNLCLVME-FARGGPLNRVLSGKRIPPDILVNWA 111
Query: 153 YRVLKGLQYLHG---MQIIHGDIKPSNLLINGKGE--------VKIADFGVSRIVEETRX 201
++ +G+ YLH + IIH D+K SN+LI K E +KI DFG++R T
Sbjct: 112 VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRT-- 169
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGH 261
++ G A+M+PE + + + DVWS GV++ E L G
Sbjct: 170 --------------TKMSAAGAYAWMAPEVIRASM----FSKGSDVWSYGVLLWELLTGE 211
Query: 262 YPLIGFGEKPDLMALICAICFGE-RLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
P G D +A+ + + L +P T F + + C D R + +L
Sbjct: 212 VPFRGI----DGLAVAYGVAMNKLALPIPSTCPEPFAKLMEDCWNPDPHSRPSFTNIL 265
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 124/301 (41%), Gaps = 35/301 (11%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIR 89
P S+PT V + LKK+ LG G+ G V Y + + + A+K L R
Sbjct: 4 PASDPT---VFHKRYLKKIRDLGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHR 60
Query: 90 HQAAHEAEILKRLDSQFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVI 148
E +IL+ L + I+K E + VME++ GSL D L R + +
Sbjct: 61 SGWKQEIDILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYL-PRHSIGLAQL 119
Query: 149 SGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXX 208
A ++ +G+ YLH IH ++ N+L++ VKI DFG+++ V E
Sbjct: 120 LLFAQQICEGMAYLHSQHYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVRED 179
Query: 209 XXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYP- 263
+ A C+ + +A DVWS GV + E C P
Sbjct: 180 GDSPVFWYAPECLKEYKFY---------------YASDVWSFGVTLYELLTHCDSSQSPP 224
Query: 264 -----LIGFGE-KPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
LIG + + ++ L + GERL P+ E +++C E + R T E L
Sbjct: 225 TKFLELIGIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENL 284
Query: 318 L 318
+
Sbjct: 285 I 285
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 88
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ + K D I + Y ++ KG++Y
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEY 147
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 199
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 200 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 230
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/218 (29%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 12 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 70
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 71 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 129
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 130 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEP-----GESPI--- 181
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 182 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 212
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ I+
Sbjct: 16 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV-ISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + + E + + +A + +G+ YLH IIH D+
Sbjct: 72 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ + ++R G+ +M+PE +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS----------GSILWMAPEVI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 179 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 115/267 (43%), Gaps = 30/267 (11%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTS--STIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G G V HQ + A+K+LN S + + E + LK I+K +
Sbjct: 19 LGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQ 78
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
V T + VME++ G LFD + ++ E + ++L + Y H ++H D+
Sbjct: 79 VIST-PTDFFMVMEYVSGGELFDYICKHGRVEEMEARRLFQQILSAVDYCHRHMVVHRDL 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
KP N+L++ KIADFG+S ++ + GE G+ Y +PE +
Sbjct: 138 KPENVLLDAHMNAKIADFGLSNMMSD---------------GEFLRDSCGSPNYAAPEVI 182
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK--PDLMALICAICFGERLEMPE 290
+ G D+WS GV++ L G P F ++ P L I F +PE
Sbjct: 183 SGRLYAGP---EVDIWSCGVILYALLCGTLP---FDDEHVPTLFKKIRGGVF----YIPE 232
Query: 291 TASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ + L+ D KR T++++
Sbjct: 233 YLNRSVATLLMHMLQVDPLKRATIKDI 259
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ ++ + +
Sbjct: 43 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHVNILLFM 97
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRV-RKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + K + +A + +G+ YLH IIH D+
Sbjct: 98 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 157
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ + ++R G+ +M+PE +
Sbjct: 158 KSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS----------GSILWMAPEVI 205
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 206 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 264
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 265 CPKAMKRLMAECLKKKRDERPLFPQILA 292
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 46 ISDLKKLT--VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILK 100
I D K+T VLG G G V ++ ++++ +ALK+L + H A + +
Sbjct: 20 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 79
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKG 158
R IV + Y + VME ++ G LF ++ R + +E S + + +
Sbjct: 80 R-----IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 134
Query: 159 LQYLHGMQIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
+QYLH + I H D+KP NLL K +K+ DFG ++ ET
Sbjct: 135 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NS 180
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPD 272
C T Y++PE + E+ Y + D+WSLGV++ L G+ P G P
Sbjct: 181 LTTPCY-TPYYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG 235
Query: 273 LMALICAICFGERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ I R+ E +PE+ + +R+ L+ + +R T+ E + +P++ +
Sbjct: 236 MKTRI-------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 288
Query: 326 RS 327
+
Sbjct: 289 ST 290
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 46 ISDLKKLT--VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILK 100
I D K+T VLG G G V ++ ++++ +ALK+L + H A + +
Sbjct: 19 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 78
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKG 158
R IV + Y + VME ++ G LF ++ R + +E S + + +
Sbjct: 79 R-----IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 133
Query: 159 LQYLHGMQIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
+QYLH + I H D+KP NLL K +K+ DFG ++ ET
Sbjct: 134 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NS 179
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPD 272
C T Y++PE + E+ Y + D+WSLGV++ L G+ P G P
Sbjct: 180 LTTPCY-TPYYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG 234
Query: 273 LMALICAICFGERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ I R+ E +PE+ + +R+ L+ + +R T+ E + +P++ +
Sbjct: 235 MKTRI-------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 287
Query: 326 RS 327
+
Sbjct: 288 ST 289
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 126/268 (47%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ ++ + +
Sbjct: 21 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHVNILLFM 75
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV-ISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + + E + + +A + +G+ YLH IIH D+
Sbjct: 76 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ + ++R G+ +M+PE +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS----------GSILWMAPEVI 183
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 184 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 243 CPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/218 (30%), Positives = 104/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 30 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 88
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ + K D I + Y ++ KG++Y
Sbjct: 89 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ-KHKERIDHIKLLQYTSQICKGMEY 147
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 148 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 199
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 200 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 230
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 133/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 25 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 84
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 192
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY--------PLIGFGEKPD 272
+PE + + + Y + D+WS+G ++ E L HY ++G E+ D
Sbjct: 193 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQED 249
Query: 273 LMALICAICFGERLEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L +I L +P + R + K + KR VE+ LA+P
Sbjct: 250 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 309
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 310 YLEQYYDPSD 319
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ ++ + +
Sbjct: 44 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRK--TRHVNILLFM 98
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRV-RKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + K + +A + +G+ YLH IIH D+
Sbjct: 99 GYSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 158
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ + ++R G+ +M+PE +
Sbjct: 159 KSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS----------GSILWMAPEVI 206
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 207 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 265
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 266 CPKAMKRLMAECLKKKRDERPLFPQILA 293
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 46 ISDLKKLT--VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILK 100
I D K+T VLG G G V ++ ++++ +ALK+L + H A + +
Sbjct: 21 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 80
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKG 158
R IV + Y + VME ++ G LF ++ R + +E S + + +
Sbjct: 81 R-----IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 135
Query: 159 LQYLHGMQIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
+QYLH + I H D+KP NLL K +K+ DFG ++ ET
Sbjct: 136 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NS 181
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPD 272
C T Y++PE + E+ Y + D+WSLGV++ L G+ P G P
Sbjct: 182 LTTPCY-TPYYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG 236
Query: 273 LMALICAICFGERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ I R+ E +PE+ + +R+ L+ + +R T+ E + +P++ +
Sbjct: 237 MKTRI-------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 289
Query: 326 RS 327
+
Sbjct: 290 ST 291
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 124/268 (46%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ I+
Sbjct: 21 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 76
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV-ISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ + ++ V + E SL+ L + + E + + +A + +G+ YLH IIH D+
Sbjct: 77 -YSTKPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 135
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ + ++R G+ +M+PE +
Sbjct: 136 KSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS----------GSILWMAPEVI 183
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 184 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 242
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 243 CPKAMKRLMAECLKKKRDERPLFPQILA 270
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 49/292 (16%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILKRLDSQFIVKC 110
VLG G G V ++ ++++ +ALK+L + H A + + R IV
Sbjct: 24 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR-----IVDV 78
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ Y + VME ++ G LF ++ R + +E S + + + +QYLH + I
Sbjct: 79 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 138
Query: 169 HGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+KP NLL K +K+ DFG ++ ET C T
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NSLTTPCY-TPY 183
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDLMALICAICF 282
Y++PE + E+ Y + D+WSLGV++ L G+ P G P + I
Sbjct: 184 YVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----- 234
Query: 283 GERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
R+ E +PE+ + +R+ L+ + +R T+ E + +P++ + +
Sbjct: 235 --RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 284
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG+ R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDSELKILDFGLCRHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 49/292 (16%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILKRLDSQFIVKC 110
VLG G G V ++ ++++ +ALK+L + H A + + R IV
Sbjct: 23 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR-----IVDV 77
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ Y + VME ++ G LF ++ R + +E S + + + +QYLH + I
Sbjct: 78 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 137
Query: 169 HGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+KP NLL K +K+ DFG ++ ET C T
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NSLTTPCY-TPY 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDLMALICAICF 282
Y++PE + E+ Y + D+WSLGV++ L G+ P G P + I
Sbjct: 183 YVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----- 233
Query: 283 GERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
R+ E +PE+ + +R+ L+ + +R T+ E + +P++ + +
Sbjct: 234 --RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 283
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 77/302 (25%), Positives = 133/302 (44%), Gaps = 51/302 (16%)
Query: 46 ISDLKKLT--VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILK 100
I D K+T VLG G G V ++ ++++ +ALK+L + H A + +
Sbjct: 15 IIDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIV 74
Query: 101 RLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKG 158
R IV + Y + VME ++ G LF ++ R + +E S + + +
Sbjct: 75 R-----IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEA 129
Query: 159 LQYLHGMQIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
+QYLH + I H D+KP NLL K +K+ DFG ++ ET
Sbjct: 130 IQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NS 175
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPD 272
C T Y++PE + E+ Y + D+WSLGV++ L G+ P G P
Sbjct: 176 LTTPCY-TPYYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPG 230
Query: 273 LMALICAICFGERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ I R+ E +PE+ + +R+ L+ + +R T+ E + +P++ +
Sbjct: 231 MKTRI-------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQ 283
Query: 326 RS 327
+
Sbjct: 284 ST 285
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 100/229 (43%), Gaps = 33/229 (14%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAV 113
+LG G V++ RH+K+ ++A+KV N S E E+LK+L+ + IVK A+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 114 -FYTIEGEICFVMEHMERGSLFDSLRVRKK---LSEDVISGVAYRVLKGLQYLHGMQIIH 169
T +ME GSL+ L L E V V+ G+ +L I+H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 170 GDIKPSNLL----INGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IKP N++ +G+ K+ DFG +R +E+ E ++ GT
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---------------EQFVSLYGTEE 180
Query: 226 YMSPE-------RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGF 267
Y+ P+ R D ++ YG D+WS+GV G P F
Sbjct: 181 YLHPDMYERAVLRKDHQK---KYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/301 (25%), Positives = 132/301 (43%), Gaps = 50/301 (16%)
Query: 46 ISDLKKLT-VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILKR 101
I D K + VLG G G V ++ ++++ +ALK+L + H A + + R
Sbjct: 30 IDDYKVTSQVLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR 89
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGL 159
IV + Y + VME ++ G LF ++ R + +E S + + + +
Sbjct: 90 -----IVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAI 144
Query: 160 QYLHGMQIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
QYLH + I H D+KP NLL K +K+ DFG ++ ET
Sbjct: 145 QYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NSL 190
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDL 273
C T Y++PE + E+ Y + D+WSLGV++ L G+ P G P +
Sbjct: 191 TTPCY-TPYYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGM 245
Query: 274 MALICAICFGERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
I R+ E +PE+ + +R+ L+ + +R T+ E + +P++ +
Sbjct: 246 KTRI-------RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQS 298
Query: 327 S 327
+
Sbjct: 299 T 299
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/293 (25%), Positives = 131/293 (44%), Gaps = 51/293 (17%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS-QFIVKCHA 112
VLG G G V ++ ++++ +ALK+L +A E E+ R IV+
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKMLQDCP------KARREVELHWRASQCPHIVRIVD 122
Query: 113 VFYTI-EGEICF--VMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYLHGMQI 167
V+ + G C VME ++ G LF ++ R + +E S + + + +QYLH + I
Sbjct: 123 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 182
Query: 168 IHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
H D+KP NLL K +K+ DFG ++ ET C T
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NSLTTPCY-TP 227
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDLMALICAIC 281
Y++PE + E+ Y + D+WSLGV++ L G+ P G P + I
Sbjct: 228 YYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI---- 279
Query: 282 FGERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
R+ E +PE+ + +R+ L+ + +R T+ E + +P++ + +
Sbjct: 280 ---RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 329
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 123/268 (45%), Gaps = 21/268 (7%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA-AHEAEILKRLDSQFIVKCHAV 113
+G G+ G VYK K + A+K+LN T+ T + QA +E +L++ I+
Sbjct: 16 IGSGSFGTVYK---GKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMG- 71
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV-ISGVAYRVLKGLQYLHGMQIIHGDI 172
Y+ ++ V + E SL+ L + + E + + +A + +G+ YLH IIH D+
Sbjct: 72 -YSTAPQLAIVTQWCEGSSLYHHLHIIETKFEMIKLIDIARQTAQGMDYLHAKSIIHRDL 130
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
K +N+ ++ VKI DFG++ + ++R G+ +M+PE +
Sbjct: 131 KSNNIFLHEDLTVKIGDFGLATV--KSRWSGSHQFEQLS----------GSILWMAPEVI 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETA 292
+ Y F DV++ G+V+ E + G P + ++ ++ L +
Sbjct: 179 RMQD-KNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVGRGYLSPDLSKVRSN 237
Query: 293 SPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R + CL+K +R ++LA
Sbjct: 238 CPKAMKRLMAECLKKKRDERPLFPQILA 265
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 27 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 194
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 195 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 312 YLEQYYDPSD 321
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 27 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 146 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD-----------------DEMTGYVATR 188
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 189 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 221
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 150 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 198
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 199 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 316 YLEQYYDPSD 325
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 31 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 150 ADIIHRDLKPSNLAVNEDSELKILDFGLARHTD-----------------DEMTGYVATR 192
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 193 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 225
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 49/292 (16%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILKRLDSQFIVKC 110
VLG G G V ++ ++++ +ALK+L + H A + + R IV
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR-----IVDV 79
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ Y + VME ++ G LF ++ R + +E S + + + +QYLH + I
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 139
Query: 169 HGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+KP NLL K +K+ DFG ++ ET C T
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NSLTTPCY-TPY 184
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDLMALICAICF 282
Y++PE + E+ Y + D+WSLGV++ L G+ P G P + I
Sbjct: 185 YVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----- 235
Query: 283 GERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
R+ E +PE+ + +R+ L+ + +R T+ E + +P++ + +
Sbjct: 236 --RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 285
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/286 (26%), Positives = 124/286 (43%), Gaps = 33/286 (11%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQ----KSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK ++ LG GN G V R+ + ++ A+K L + R E +ILK L S
Sbjct: 12 LKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-DFQREIQILKALHS 70
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYL 162
FIVK V Y + VME++ G L D L R R +L + + ++ KG++YL
Sbjct: 71 DFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYL 130
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+ +H D+ N+L+ + VKIADFG+++++ + G++ I
Sbjct: 131 GSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP-----GQSPI---- 181
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYPLIGF----GEKPDLM 274
+ +PE + + DVWS GVV+ E C P F G + D+
Sbjct: 182 --FWYAPESLSD----NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVP 235
Query: 275 AL---ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
AL + + G+RL P E ++ C + R + L
Sbjct: 236 ALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 281
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 29 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 88
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 196
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 197 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 254 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 314 YLEQYYDPSD 323
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 131/289 (45%), Gaps = 43/289 (14%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS-QFIVKCHA 112
VLG G G V ++ ++++ +ALK+L +A E E+ R IV+
Sbjct: 75 VLGLGINGKVLQIFNKRTQEKFALKMLQDCP------KARREVELHWRASQCPHIVRIVD 128
Query: 113 VFYTI-EGEICF--VMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYLHGMQI 167
V+ + G C VME ++ G LF ++ R + +E S + + + +QYLH + I
Sbjct: 129 VYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINI 188
Query: 168 IHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
H D+KP NLL K +K+ DFG ++ ET C T
Sbjct: 189 AHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NSLTTPCY-TP 233
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDLMALICAIC 281
Y++PE + E+ Y + D+WSLGV++ L G+ P G P + I
Sbjct: 234 YYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISP---GMKTRIR 286
Query: 282 FGE-RLEMPETA--SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
G+ PE + S E + +R+ L+ + +R T+ E + +P++ + +
Sbjct: 287 MGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 335
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 47 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 106
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 107 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 165
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 166 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 214
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 215 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 272 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 331
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 332 YLEQYYDPSD 341
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 4 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 63
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 64 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 121
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 122 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 168
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 169 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 205
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 15 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 73
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ + D I + Y ++ KG++Y
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERI-DHIKLLQYTSQICKGMEY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 184
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 185 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 215
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 66 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 170
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 171 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 207
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 30 QNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-----------------DEMTGYVATR 191
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 192 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 224
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMXGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 66 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 170
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 171 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 207
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 35 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 94
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 95 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 153
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 154 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 202
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 203 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 259
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 260 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 319
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 320 YLEQYYDPSD 329
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 27 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 194
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 195 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 312 YLEQYYDPSD 321
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMXGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 25 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 84
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 85 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 143
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 144 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 192
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 193 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 249
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 250 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 309
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 310 YLEQYYDPSD 319
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 30 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 149 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-----------------DEMTGYVATR 191
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 192 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 224
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 66 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 170
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 171 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 66 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 170
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 171 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 66 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 170
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 171 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 98/219 (44%), Gaps = 18/219 (8%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
+ I H DIKP NLL++ + +KI+DFG++ + GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLN------------KMXGTL 170
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 171 PYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 32 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 91
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 199
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 200 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 256
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 257 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 316
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 317 YLEQYYDPSD 326
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 33 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 92
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 93 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 151
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 152 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 200
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 201 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 257
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 258 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 317
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 318 YLEQYYDPSD 327
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 24 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 83
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 84 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 142
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 143 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 191
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 192 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 248
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 249 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 308
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 309 YLEQYYDPSD 318
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 198
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 199 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 316 YLEQYYDPSD 325
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 27 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 146 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 194
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 195 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 252 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 312 YLEQYYDPSD 321
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 65
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 66 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 170
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 171 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 207
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 122/291 (41%), Gaps = 53/291 (18%)
Query: 55 LGHGNGGIVY-----KVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G G V+ + ++ + A+K L S + R EAE+L L Q IV+
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-RQDFQREAELLTMLQHQHIVR 107
Query: 110 CHAVFYTIEGE-ICFVMEHMERGSLFDSLRVR---KKL---SEDVISG---------VAY 153
V EG + V E+M G L LR KL EDV G VA
Sbjct: 108 FFGV--CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 165
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
+V G+ YL G+ +H D+ N L+ VKI DFG+SR + T
Sbjct: 166 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY----------- 214
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP-- 271
M +M PE + + + DVWS GVV+ E + +G++P
Sbjct: 215 -RVGGRTMLPIRWMPPESILYRK----FTTESDVWSFGVVLWE-------IFTYGKQPWY 262
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ A+ C I G LE P PE +R C +++ ++R +++++ A
Sbjct: 263 QLSNTEAIDC-ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 312
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 31 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 192
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 193 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 225
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX-----------VATRWYR 198
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 199 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 316 YLEQYYDPSD 325
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKC-QHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 198
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 199 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 316 YLEQYYDPSD 325
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/310 (24%), Positives = 134/310 (43%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 32 NLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 91
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 92 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 150
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 151 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEX-----------VATRWYR 199
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 200 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 256
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 257 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 316
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 317 YLEQYYDPSD 326
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R ++ E A + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----------------EMA-GFVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 101/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I K L+ +
Sbjct: 5 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHE 64
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 65 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 122
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 123 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 169
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 170 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 206
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 21 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 182
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 183 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 215
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 44 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 103
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 205
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 206 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 238
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 102/218 (46%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 13 LKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 71
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME++ GSL D L+ K+ D I + Y ++ KG++Y
Sbjct: 72 DNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERI-DHIKLLQYTSQICKGMEY 130
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH ++ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 131 LGTKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEP-----GESPI--- 182
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 183 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 213
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 122/291 (41%), Gaps = 53/291 (18%)
Query: 55 LGHGNGGIVY-----KVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G G V+ + ++ + A+K L S + R EAE+L L Q IV+
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-RQDFQREAELLTMLQHQHIVR 78
Query: 110 CHAVFYTIEGE-ICFVMEHMERGSLFDSLRVR---KKL---SEDVISG---------VAY 153
V EG + V E+M G L LR KL EDV G VA
Sbjct: 79 FFGV--CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 136
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
+V G+ YL G+ +H D+ N L+ VKI DFG+SR + T
Sbjct: 137 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY----------- 185
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP-- 271
M +M PE + + + DVWS GVV+ E + +G++P
Sbjct: 186 -RVGGRTMLPIRWMPPESILYRK----FTTESDVWSFGVVLWE-------IFTYGKQPWY 233
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ A+ C I G LE P PE +R C +++ ++R +++++ A
Sbjct: 234 QLSNTEAIDC-ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 283
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 117/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V+E+M +GSL D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 82 -VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 187
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 188 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAF 268
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R ++ E A + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----------------EMA-GFVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/229 (27%), Positives = 99/229 (43%), Gaps = 33/229 (14%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAV 113
+LG G V++ RH+K+ ++A+KV N S E E+LK+L+ + IVK A+
Sbjct: 16 ILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAI 75
Query: 114 -FYTIEGEICFVMEHMERGSLFDSLRVRKK---LSEDVISGVAYRVLKGLQYLHGMQIIH 169
T +ME GSL+ L L E V V+ G+ +L I+H
Sbjct: 76 EEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDVVGGMNHLRENGIVH 135
Query: 170 GDIKPSNLL----INGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IKP N++ +G+ K+ DFG +R +E+ E + GT
Sbjct: 136 RNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDD---------------EQFVXLYGTEE 180
Query: 226 YMSPE-------RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGF 267
Y+ P+ R D ++ YG D+WS+GV G P F
Sbjct: 181 YLHPDMYERAVLRKDHQK---KYGATVDLWSIGVTFYHAATGSLPFRPF 226
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 45 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 206
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 207 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 239
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/269 (25%), Positives = 118/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V+E+M +GSL D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 82 -VSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEXT-------------ARQGAKFPIKWTAPEAA 187
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 188 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAF 268
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 32 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + T
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------HTADEMTGYVATR 193
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 194 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 106/216 (49%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 21 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 139
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R ++ E A + T
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD----------------EMA-GFVATR 182
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 183 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 215
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 81/291 (27%), Positives = 123/291 (42%), Gaps = 53/291 (18%)
Query: 55 LGHGNGGIVY-----KVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G G V+ + ++ + A+K L S + R EAE+L L Q IV+
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESA-RQDFQREAELLTMLQHQHIVR 84
Query: 110 CHAVFYTIEGE-ICFVMEHMERGSLFDSLRVR---KKL---SEDVISG---------VAY 153
V EG + V E+M G L LR KL EDV G VA
Sbjct: 85 FFGV--CTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVAS 142
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
+V G+ YL G+ +H D+ N L+ VKI DFG+SR + T
Sbjct: 143 QVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYY----------- 191
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP-- 271
M +M PE + ++ + DVWS GVV+ E + +G++P
Sbjct: 192 -RVGGRTMLPIRWMPPESILYRKFTTE----SDVWSFGVVLWE-------IFTYGKQPWY 239
Query: 272 ---DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ A+ C I G LE P PE +R C +++ ++R +++++ A
Sbjct: 240 QLSNTEAIDC-ITQGRELERPRACPPEVYAIMRGCWQREPQQRHSIKDVHA 289
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 115/275 (41%), Gaps = 26/275 (9%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
+G GN G+ +R + + + A+K + ++ I E + L IV+ V
Sbjct: 28 IGSGNFGVARLMRDKLTKELVAVKYIERGAA--IDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 115 YTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKP 174
T + +ME+ G L++ + + SED ++L G+ Y H MQI H D+K
Sbjct: 86 LT-PTHLAIIMEYASGGELYERICNAGRFSEDEARFFFQQLLSGVSYCHSMQICHRDLKL 144
Query: 175 SNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
N L++G +KI DFG S+ + + +GT AY++PE +
Sbjct: 145 ENTLLDGSPAPRLKICDFGYSK---------------SSVLHSQPKSTVGTPAYIAPEVL 189
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET- 291
+ + G DVWS GV + LVG YP E D I I + +P+
Sbjct: 190 LRQEYDGK---IADVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTIQRI-LSVKYSIPDDI 245
Query: 292 -ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
SPE + D R ++ E+ + + K
Sbjct: 246 RISPECCHLISRIFVADPATRISIPEIKTHSWFLK 280
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I VME+M +G L D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 82 -VSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 187
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 188 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAF 268
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 45 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMXGXVATR 206
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 207 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 239
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 36 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 95
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 155 ADIIHRDLKPSNLAVNEDXELKILDFGLARHTD-----------------DEMTGYVATR 197
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 198 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 230
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 128/292 (43%), Gaps = 49/292 (16%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILKRLDSQFIVKC 110
VLG G G V ++ ++++ +ALK+L + H A + + R IV
Sbjct: 23 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR-----IVDV 77
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ Y + VME ++ G LF ++ R + +E S + + + +QYLH + I
Sbjct: 78 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 137
Query: 169 HGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+KP NLL K +K+ DFG ++ ET C T
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTE-----------PCY-TPY 182
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDLMALICAICF 282
Y++PE + E+ Y + D+WSLGV++ L G+ P G P + I
Sbjct: 183 YVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----- 233
Query: 283 GERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
R+ E +PE+ + +R+ L+ + +R T+ E + +P++ + +
Sbjct: 234 --RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 283
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 80/153 (52%), Gaps = 19/153 (12%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
KL LG G VYK + + ++++ ALK + A E +LK L IV
Sbjct: 6 KLDKLGEGTYATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTL 65
Query: 111 HAVFYTIEGEICFVMEHMER---------GSLFDSLRVRKKLSEDVISGVAYRVLKGLQY 161
H + +T E + V E++++ G++ + V+ L +++L+GL Y
Sbjct: 66 HDIIHT-EKSLTLVFEYLDKDLKQYLDDCGNIINMHNVKLFL---------FQLLRGLAY 115
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
H +++H D+KP NLLIN +GE+K+ADFG++R
Sbjct: 116 CHRQKVLHRDLKPQNLLINERGELKLADFGLAR 148
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 32 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + T
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------HTADEMTGYVATR 193
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 194 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 226
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 32 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + T
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLAR-----------------HTADEMTGYVATR 193
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 194 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 226
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGXVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 37 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 198
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 199 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 231
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/286 (25%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTIIRHQAAHEAEILKRLD--SQF 106
L +G G V++V ++K IYA+K +N + T+ ++ +E L +L S
Sbjct: 61 LKQIGSGGSSKVFQVLNEKK-QIYAIKYVNLEEADNQTLDSYR--NEIAYLNKLQQHSDK 117
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHG 164
I++ + Y I + +++ ME G++ + ++KK S D +Y +L+ + +H
Sbjct: 118 IIRLYD--YEITDQYIYMV--MECGNIDLNSWLKKKKSIDPWERKSYWKNMLEAVHTIHQ 173
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
I+H D+KP+N LI G +K+ DFG++ ++ + +G
Sbjct: 174 HGIVHSDLKPANFLI-VDGMLKLIDFGIANQMQPDTTSVVKD------------SQVGAV 220
Query: 225 AYMSPERV---DSERWGGDYGFAG----DVWSLGVVVLECLVGHYPLIGFGEKPDLMALI 277
YM PE + S R G DVWSLG ++ G P + + L
Sbjct: 221 NYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ--ISKLH 278
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
I +E P+ + + ++ CL++D ++R ++ ELLA+P+V
Sbjct: 279 AIIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELLAHPYV 324
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 35 QNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 94
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 95 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 153
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 154 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 196
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 197 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 229
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/311 (24%), Positives = 133/311 (42%), Gaps = 46/311 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
+L +G G G+V + A+K ++ + E +IL R + ++
Sbjct: 47 QLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGI 106
Query: 111 HAVF--YTIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ T+E ++++ + L+ L+ ++LS D I Y++L+GL+Y+H +
Sbjct: 107 RDILRASTLEAMRDVYIVQDLMETDLYKLLK-SQQLSNDHICYFLYQILRGLKYIHSANV 165
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLLIN ++KI DFG++RI + + T Y
Sbjct: 166 LHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEX-----------VATRWYR 214
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 215 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 271
Query: 276 LICAICFGERLEM---------------PETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
L C I R + P++ S R L + KR TVEE LA+
Sbjct: 272 LNCIINMKARNYLQSLPSKTKVAWAKLFPKSDSKALDLLDR-MLTFNPNKRITVEEALAH 330
Query: 321 PFVTKRSSSSN 331
P++ + ++
Sbjct: 331 PYLEQYYDPTD 341
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 21 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ L + ++ +KL++D + + Y++L+GL+Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-QKLTDDHVQFLIYQILRGLKYIHS 139
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 182
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 183 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 215
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 30 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 191
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 192 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 224
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 22 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 81
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 183
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 184 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 216
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 23 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 82
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 83 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 141
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 142 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 184
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 185 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 217
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 115/265 (43%), Gaps = 37/265 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY +K + A+K L T+ + EA ++K +
Sbjct: 32 TDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 89
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T+E V E+M G+L D LR R++++ V+ +A ++ ++YL
Sbjct: 90 LVQLLGVC-TLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSAMEYLEK 148
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 149 KNFIHRDLAARNCLVGENHVVKVADFGLSRLM----------------TGDTYTAHAGAK 192
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFGEKPDLMALIC 278
+ +PE + + DVW+ GV++ E + YP I + DL+
Sbjct: 193 FPIKWTAPESLAY----NTFSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYDLLEK-- 246
Query: 279 AICFGERLEMPETASPEFRRFVRSC 303
G R+E PE P+ +R+C
Sbjct: 247 ----GYRMEQPEGCPPKVYELMRAC 267
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 30 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 89
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 90 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 148
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 149 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 191
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 192 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 224
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 24 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 83
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 84 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 142
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 143 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 185
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 186 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 218
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 22 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 81
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 82 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 140
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 141 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 183
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 184 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 216
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 44 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 103
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 104 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 162
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 163 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 205
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 206 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 238
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 27 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 188
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 189 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 221
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 36 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 95
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 96 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 154
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 155 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 197
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 198 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 230
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 31 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 192
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 193 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 225
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 32 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 91
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 92 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 150
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 151 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 193
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 194 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 226
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/283 (26%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 47 SDLKKLTVLGHGNGGIVYK---VRHQKSNSI-YALKVLNTTSSTIIRHQAAHEAEILKRL 102
++L+K+ VLG G G VYK + ++ I A+KVL +S + EA ++ +
Sbjct: 17 TELRKVKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGV 76
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV-RKKLSEDVISGVAYRVLKGLQY 161
S ++ + + T + V + M G L D +R R +L + ++ KG+ Y
Sbjct: 77 GSPYVSRLLGICLT--STVQLVTQLMPYGCLLDHVRENRGRLGSQDLLNWCMQIAKGMSY 134
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRI--VEETRXXXXXXXXXXXXIGEAAIA 219
L ++++H D+ N+L+ VKI DFG++R+ ++ET G+ I
Sbjct: 135 LEDVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADG--------GKVPI- 185
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFG--EKPDLMAL 276
+M+ E + R + DVWS GV V E + G P G E PDL+
Sbjct: 186 -----KWMALESILRRR----FTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDLLEK 236
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
GERL P + + + C D R EL++
Sbjct: 237 ------GERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVS 273
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 45 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 104
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 105 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 163
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 164 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 206
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 207 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 239
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 17 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 72
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 73 -VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 131
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 132 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 178
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 179 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 230
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 231 CPESLHDLMCQCWRKDPEERPTFEYLQAF 259
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 27 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 188
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 189 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 221
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 15 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 70
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 71 -VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 129
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 130 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 176
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 177 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 228
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 229 CPESLHDLMCQCWRKDPEERPTFEYLQAF 257
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 37 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 198
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 199 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 231
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 27 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 86
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 87 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 145
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 146 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 188
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 189 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 221
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 48 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 107
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 209
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 210 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 242
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 37 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 96
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 97 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 155
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 156 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 198
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 199 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 231
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 31 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 90
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 91 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 149
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 150 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 192
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 193 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 225
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + + Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIMLN---AMHYNQTVDIWSVGCIMAELLTG 219
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 79/325 (24%), Positives = 128/325 (39%), Gaps = 70/325 (21%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH----EAEILKRLDSQFIVKC 110
+G G+ G+V ++ +I A+K++N I + E ++K+L I +
Sbjct: 34 IGQGSYGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARL 93
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRV------------------------------- 139
+ V Y E IC VME G L D L V
Sbjct: 94 YEV-YEDEQYICLVMELCHGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAING 152
Query: 140 -----RKKLS----EDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI--NGKGEVKIA 188
R+ L E +IS + ++ L YLH I H DIKP N L N E+K+
Sbjct: 153 SIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGICHRDIKPENFLFSTNKSFEIKLV 212
Query: 189 DFGVSRIVEETRXXXXXXXXXXXXIGE--AAIACMGTCAYMSPERVDSERWGGDYGFAGD 246
DFG+S+ + GE GT +++PE +++ YG D
Sbjct: 213 DFGLSKEFYKLNN------------GEYYGMTTKAGTPYFVAPEVLNTT--NESYGPKCD 258
Query: 247 VWSLGVVVLECLVGHYPLIGFGEKPDLMALIC-AICFGERLEMP--ETASPEFRRFVRSC 303
WS GV++ L+G P G + + ++ +CF E P SP R + +
Sbjct: 259 AWSAGVLLHLLLMGAVPFPGVNDADTISQVLNKKLCF----ENPNYNVLSPLARDLLSNL 314
Query: 304 LEKDWRKRGTVEELLAYPFVTKRSS 328
L ++ +R L +P++++ S
Sbjct: 315 LNRNVDERFDAMRALQHPWISQFSD 339
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 27 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 146 LHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLT-----------EYVATRWYR 194
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY--------PLIGFGEKPD 272
+PE + + + Y + D+WS+G ++ E L HY ++G + D
Sbjct: 195 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 273 LMALICAICFGERLEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L +I L +P + R + K + KR VE+ LA+P
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 312 YLEQYYDPSD 321
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL + I+
Sbjct: 29 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI 88
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 148 LHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 196
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 197 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 254 LNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 314 YLAQYYDPSD 323
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 82 -VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 187
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 188 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAF 268
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 71/310 (22%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL R + I+
Sbjct: 27 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGI 86
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 87 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 145
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 146 LHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 194
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY--------PLIGFGEKPD 272
+PE + + + Y + D+WS+G ++ E L HY ++G + D
Sbjct: 195 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 251
Query: 273 LMALICAICFGERLEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L +I L +P + R + K + KR VE+ LA+P
Sbjct: 252 LNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 311
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 312 YLEQYYDPSD 321
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 48 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 107
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 108 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 166
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 167 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMXGYVATR 209
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 210 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 242
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 132/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A++ ++ + E +IL R + I+
Sbjct: 31 NLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENIIGI 90
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 91 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 149
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 150 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 198
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 199 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 256 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 315
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 316 YLEQYYDPSD 325
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 124/294 (42%), Gaps = 33/294 (11%)
Query: 41 PDVENISDLKKLTVLGHGNGGIVYKVRHQ----KSNSIYALKVLNTTSSTIIRHQAAHEA 96
P + LK ++ LG GN G V R+ + ++ A+K L + R E
Sbjct: 17 PTIFEERHLKYISQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQR-DFQREI 75
Query: 97 EILKRLDSQFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYR 154
+ILK L S FIVK V Y + VME++ G L D L R R +L + + +
Sbjct: 76 QILKALHSDFIVKYRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQ 135
Query: 155 VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIG 214
+ KG++YL + +H D+ N+L+ + VKIADFG+++++ + G
Sbjct: 136 ICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREP-----G 190
Query: 215 EAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYPLIGF--- 267
++ I + +PE + + DVWS GVV+ E C P F
Sbjct: 191 QSPI------FWYAPESLSD----NIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRM 240
Query: 268 ----GEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ P L L+ + G+RL P E ++ C + R + L
Sbjct: 241 MGCERDVPALSRLLELLEEGQRLPAPPACPAEVHELMKLCWAPSPQDRPSFSAL 294
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 102/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 21 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 80
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ L + ++ KL++D + + Y++L+GL+Y+H
Sbjct: 81 GLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKC-AKLTDDHVQFLIYQILRGLKYIHS 139
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DFG++R + + + T
Sbjct: 140 ADIIHRDLKPSNLAVNEDCELKILDFGLARHTD-----------------DEMTGYVATR 182
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 183 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 215
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 81/315 (25%), Positives = 128/315 (40%), Gaps = 56/315 (17%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L LG G G+V+ + A+K + T ++H A E +I++RLD IVK
Sbjct: 16 LKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKH-ALREIKIIRRLDHDNIVKVF 74
Query: 112 AVF-------------YTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKG 158
+ T + V E+ME ++ + L E+ Y++L+G
Sbjct: 75 EILGPSGSQLTDDVGSLTELNSVYIVQEYMETD--LANVLEQGPLLEEHARLFMYQLLRG 132
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRXXXXXXXXXXXXIGEAA 217
L+Y+H ++H D+KP+NL IN + V KI DFG++RI++ + E
Sbjct: 133 LKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDP-------HYSHKGHLSEGL 185
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGE-------- 269
+ T Y SP + S +Y A D+W+ G + E L G G E
Sbjct: 186 V----TKWYRSPRLLLSP---NNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLIL 238
Query: 270 -------KPDLMALICAICFGERLEMPETASP----------EFRRFVRSCLEKDWRKRG 312
+ D L+ I R +M E P E F+ L R
Sbjct: 239 ESIPVVHEEDRQELLSVIPVYIRNDMTEPHKPLTQLLPGISREAVDFLEQILTFSPMDRL 298
Query: 313 TVEELLAYPFVTKRS 327
T EE L++P+++ S
Sbjct: 299 TAEEALSHPYMSIYS 313
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 123/289 (42%), Gaps = 44/289 (15%)
Query: 35 TSNPTSP---DVENI--SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR 89
+S P P D I LK LG G G V+ + K + A+K + S ++
Sbjct: 165 SSKPQKPWEKDAWEIPRESLKLEKKLGAGQFGEVWMATYNKHTKV-AVKTMKPGSMSVEA 223
Query: 90 HQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS 149
A EA ++K L +VK HAV + I + E M +GSL D L+ + + +
Sbjct: 224 FLA--EANVMKTLQHDKLVKLHAV--VTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPK 279
Query: 150 GVAY--RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
+ + ++ +G+ ++ IH D++ +N+L++ KIADFG++R
Sbjct: 280 LIDFSAQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLAR------------- 326
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIG 266
+ + +PE ++ G + DVWS G++++E + G P G
Sbjct: 327 ----------VGAKFPIKWTAPEAINF----GSFTIKSDVWSFGILLMEIVTYGRIPYPG 372
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVE 315
P+ +I A+ G R+ PE E + C + +R T E
Sbjct: 373 MS-NPE---VIRALERGYRMPRPENCPEELYNIMMRCWKNRPEERPTFE 417
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 82 -VSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 187
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 188 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAF 268
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 111/248 (44%), Gaps = 35/248 (14%)
Query: 39 TSPDVENISDLKKL-TVLGHGNGGIVYKVRHQKSNSIYALKVLNTT----SSTIIRHQAA 93
T+P ++SD +L +LG G V+ R + + A+KVL S +R +
Sbjct: 5 TTP--SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-- 60
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEIC------FVMEHMERGSLFDSLRVRKKLSEDV 147
EA+ L+ IV AV+ T E E VME+++ +L D + ++
Sbjct: 61 REAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
V + L + H IIH D+KP+N++I+ VK+ DFG++R + ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGF 267
A +GT Y+SPE+ G DV+SLG V+ E L G P
Sbjct: 178 -----------AVIGTAQYLSPEQA----RGDSVDARSDVYSLGCVLYEVLTGEPPFT-- 220
Query: 268 GEKPDLMA 275
G+ PD +A
Sbjct: 221 GDSPDSVA 228
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 103/218 (47%), Gaps = 24/218 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK L LG GN G V Y + + A+K L ++ +R E EILK L
Sbjct: 15 LKFLRQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLR-DFEREIEILKSLQH 73
Query: 105 QFIVKCHAVFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQY 161
IVK V Y+ + +ME + GSL + L+ K+ D I + Y ++ KG++Y
Sbjct: 74 DNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERI-DHIKLLQYTSQICKGMEY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L + IH D+ N+L+ + VKI DFG+++++ + + GE+ I
Sbjct: 133 LGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEP-----GESPI--- 184
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ +PE + + + A DVWS GVV+ E
Sbjct: 185 ---FWYAPESLTESK----FSVASDVWSFGVVLYELFT 215
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
++S +K V+G G G V + R + K S A+K L + R + EA I+ +
Sbjct: 14 DVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQ 73
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
+ I++ V T + + E ME G+L LR+ + + + G+ + G++
Sbjct: 74 FEHPNIIRLEGVV-TNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMR 132
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL M +H D+ N+L+N K++DFG+SR +EE I
Sbjct: 133 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKI------- 185
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP--DL--MAL 276
+ +PE + + + A D WS G+V+ E ++ FGE+P D+ +
Sbjct: 186 --PIRWTAPEAIAFRK----FTSASDAWSYGIVMWE-------VMSFGERPYWDMSNQDV 232
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
I AI RL P + + C +KD R ++++
Sbjct: 233 INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 275
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 122/283 (43%), Gaps = 29/283 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
++S +K V+G G G V + R + K S A+K L + R + EA I+ +
Sbjct: 12 DVSYVKIEEVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQ 71
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
+ I++ V T + + E ME G+L LR+ + + + G+ + G++
Sbjct: 72 FEHPNIIRLEGVV-TNSMPVMILTEFMENGALDSFLRLNDGQFTVIQLVGMLRGIASGMR 130
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL M +H D+ N+L+N K++DFG+SR +EE I
Sbjct: 131 YLAEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKI------- 183
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP--DL--MAL 276
+ +PE + + + A D WS G+V+ E ++ FGE+P D+ +
Sbjct: 184 --PIRWTAPEAIAFRK----FTSASDAWSYGIVMWE-------VMSFGERPYWDMSNQDV 230
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
I AI RL P + + C +KD R ++++
Sbjct: 231 INAIEQDYRLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVS 273
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K++ + +V+ +AV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKIRHEKLVQLYAV- 81
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 82 -VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 187
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 188 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAF 268
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 104/216 (48%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI D+G++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDYGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 34/282 (12%)
Query: 47 SDLKKLTVLGHGNGGIVYK---VRHQKSNSI-YALKVLNTTSSTIIRHQAAHEAEILKRL 102
++LK++ VLG G G VYK V ++ I A+K+LN T+ + EA I+ +
Sbjct: 15 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 74
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D +V+ V + I V + M G L + + K + ++ ++ KG+ Y
Sbjct: 75 DHPHLVRLLGV--CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L +++H D+ N+L+ VKI DFG++R++E G+ I M
Sbjct: 133 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG------GKMPIKWM 186
Query: 222 G-TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFG--EKPDLMALI 277
C + + DVWS GV + E + G P G E PDL+
Sbjct: 187 ALECIHYR-----------KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLEK- 234
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
GERL P + + + C D R +EL A
Sbjct: 235 -----GERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 271
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 82 -VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 141 AAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 187
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 188 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAF 268
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L V+G G+ G V K K + ALK++ QAA E IL+ L Q
Sbjct: 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR--FHRQAAEEIRILEHLRKQDKDNTM 159
Query: 112 AVF-----YTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHG 164
V +T IC E + +L++ ++ K S ++ A+ +L+ L LH
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 165 MQIIHGDIKPSNLLI--NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IIH D+KP N+L+ G+ +K+ DFG S E R +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR----------------VYTXIQ 261
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
+ Y +PE + G YG D+WSLG ++ E L G YPL+ ++ D +A C
Sbjct: 262 SRFYRAPEVI----LGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLA-----CM 311
Query: 283 GERLEMPET----ASPEFRRFV 300
E L MP AS + FV
Sbjct: 312 IELLGMPSQKLLDASKRAKNFV 333
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 38/288 (13%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLN----TTSSTIIRHQAAHEAEILKRLDSQFIVK 109
V+G G +V + ++++ +A+K+++ T+S + EA I L IV+
Sbjct: 31 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 90
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK----LSEDVISGVAYRVLKGLQYLHGM 165
Y+ +G + V E M+ L + R SE V S ++L+ L+Y H
Sbjct: 91 LLET-YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 149
Query: 166 QIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
IIH D+KP +L+ K VK+ FGV+ + E+ G A +G
Sbjct: 150 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--------------GLVAGGRVG 195
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE V E YG DVW GV++ L G P G E+ L I
Sbjct: 196 TPHFMAPEVVKRE----PYGKPVDVWGCGVILFILLSGCLPFYGTKER-----LFEGIIK 246
Query: 283 GERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
G+ P S + VR L D +R TV E L +P++ +R
Sbjct: 247 GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD 294
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 118/282 (41%), Gaps = 34/282 (12%)
Query: 47 SDLKKLTVLGHGNGGIVYK---VRHQKSNSI-YALKVLNTTSSTIIRHQAAHEAEILKRL 102
++LK++ VLG G G VYK V ++ I A+K+LN T+ + EA I+ +
Sbjct: 38 TELKRVKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASM 97
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D +V+ V + I V + M G L + + K + ++ ++ KG+ Y
Sbjct: 98 DHPHLVRLLGV--CLSPTIQLVTQLMPHGCLLEYVHEHKDNIGSQLLLNWCVQIAKGMMY 155
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L +++H D+ N+L+ VKI DFG++R++E G+ I M
Sbjct: 156 LEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADG------GKMPIKWM 209
Query: 222 G-TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFG--EKPDLMALI 277
C + + DVWS GV + E + G P G E PDL+
Sbjct: 210 ALECIHYR-----------KFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDLLE-- 256
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
GERL P + + + C D R +EL A
Sbjct: 257 ----KGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAA 294
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 124/288 (43%), Gaps = 38/288 (13%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLN----TTSSTIIRHQAAHEAEILKRLDSQFIVK 109
V+G G +V + ++++ +A+K+++ T+S + EA I L IV+
Sbjct: 33 VIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVE 92
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK----LSEDVISGVAYRVLKGLQYLHGM 165
Y+ +G + V E M+ L + R SE V S ++L+ L+Y H
Sbjct: 93 LLET-YSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQILEALRYCHDN 151
Query: 166 QIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
IIH D+KP +L+ K VK+ FGV+ + E+ G A +G
Sbjct: 152 NIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGES--------------GLVAGGRVG 197
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
T +M+PE V E YG DVW GV++ L G P G E+ L I
Sbjct: 198 TPHFMAPEVVKRE----PYGKPVDVWGCGVILFILLSGCLPFYGTKER-----LFEGIIK 248
Query: 283 GERLEMPET---ASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
G+ P S + VR L D +R TV E L +P++ +R
Sbjct: 249 GKYKMNPRQWSHISESAKDLVRRMLMLDPAERITVYEALNHPWLKERD 296
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 20/224 (8%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L +G G G+VYK ++ + K+ I E ILK L IVK +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS-GVAYRVLKGLQYLHGMQIIHG 170
V +T + + V EH+++ L L V + E V + ++L G+ Y H +++H
Sbjct: 67 DVIHT-KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+KP NLLIN +GE+KIADFG++R E T Y +P+
Sbjct: 125 DLKPQNLLINREGELKIADFGLAR---------AFGIPVRKYTHEVV-----TLWYRAPD 170
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
+ + Y D+WS+G + E + G G E LM
Sbjct: 171 VLMGSK---KYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLM 211
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/224 (28%), Positives = 98/224 (43%), Gaps = 20/224 (8%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L +G G G+VYK ++ + K+ I E ILK L IVK +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS-GVAYRVLKGLQYLHGMQIIHG 170
V +T + + V EH+++ L L V + E V + ++L G+ Y H +++H
Sbjct: 67 DVIHT-KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+KP NLLIN +GE+KIADFG++R E T Y +P+
Sbjct: 125 DLKPQNLLINREGELKIADFGLAR---------AFGIPVRKYTHEVV-----TLWYRAPD 170
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
+ + Y D+WS+G + E + G G E LM
Sbjct: 171 VLMGSK---KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/298 (24%), Positives = 125/298 (41%), Gaps = 39/298 (13%)
Query: 34 PTSNPTS----PDVENI--SDLKKLTVLGHGNGGIVYKVRHQKSN--SIYALKVLNTTSS 85
PTS P + D I L+ LG G G V+ + +I LK N +
Sbjct: 166 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPE 225
Query: 86 TIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKL 143
++ EA+++K+L + +V+ +AV E I V E+M +GSL D L+ + K L
Sbjct: 226 AFLQ-----EAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGEMGKYL 278
Query: 144 SEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXX 203
+ +A ++ G+ Y+ M +H D++ +N+L+ K+ADFG+ R++E+
Sbjct: 279 RLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLGRLIEDNEYT- 337
Query: 204 XXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHY 262
A + +PE G + DVWS G+++ E G
Sbjct: 338 ------------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELTTKGRV 381
Query: 263 PLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
P G + ++ + G R+ P + C KD +R T E L A+
Sbjct: 382 PYPGMVNR----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKDPEERPTFEYLQAF 435
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 70/273 (25%), Positives = 123/273 (45%), Gaps = 30/273 (10%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
+K + LG G G V+ + S + A+K L + ++ EA ++K L +V
Sbjct: 15 IKLVKRLGAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSV--QAFLEEANLMKTLQHDKLV 71
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVR---KKLSEDVISGVAYRVLKGLQYLHGM 165
+ +AV T E I + E+M +GSL D L+ K L +I A ++ +G+ Y+
Sbjct: 72 RLYAVV-TREEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFSA-QIAEGMAYIERK 129
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
IH D++ +N+L++ KIADFG++R++E+ A
Sbjct: 130 NYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-------------AREGAKFPIK 176
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGE 284
+ +PE ++ G + DVWS G+++ E + G P G D+M A+ G
Sbjct: 177 WTAPEAINF----GCFTIKSDVWSFGILLYEIVTYGKIPYPG-RTNADVMT---ALSQGY 228
Query: 285 RLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
R+ E E ++ C ++ +R T + L
Sbjct: 229 RMPRVENCPDELYDIMKMCWKEKAEERPTFDYL 261
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 113/262 (43%), Gaps = 43/262 (16%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L V+G G+ G V K K + ALK++ QAA E IL+ L Q
Sbjct: 102 LKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKR--FHRQAAEEIRILEHLRKQDKDNTM 159
Query: 112 AVF-----YTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHG 164
V +T IC E + +L++ ++ K S ++ A+ +L+ L LH
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 165 MQIIHGDIKPSNLLI--NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IIH D+KP N+L+ G+ +K+ DFG S E R +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR----------------VYTXIQ 261
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
+ Y +PE + G YG D+WSLG ++ E L G YPL+ ++ D +A C
Sbjct: 262 SRFYRAPEVI----LGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLA-----CM 311
Query: 283 GERLEMPET----ASPEFRRFV 300
E L MP AS + FV
Sbjct: 312 IELLGMPSQKLLDASKRAKNFV 333
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/310 (23%), Positives = 131/310 (42%), Gaps = 44/310 (14%)
Query: 51 KLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
L+ +G G G+V + A+K ++ + E +IL + I+
Sbjct: 29 NLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENIIGI 88
Query: 111 HAVFY--TIEG-EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQI 167
+ + TIE + ++++ + L+ L+ + LS D I Y++L+GL+Y+H +
Sbjct: 89 NDIIRAPTIEQMKDVYIVQDLMETDLYKLLKT-QHLSNDHICYFLYQILRGLKYIHSANV 147
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H D+KPSNLL+N ++KI DFG++R+ + + T Y
Sbjct: 148 LHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEY-----------VATRWYR 196
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVG-------HY-----PLIGFGEKPDLMA 275
+PE + + + Y + D+WS+G ++ E L HY ++G P
Sbjct: 197 APEIMLNSK---GYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 253
Query: 276 LICAICFGER---LEMPETASPEFRRFVRSCLEK-----------DWRKRGTVEELLAYP 321
L C I R L +P + R + K + KR VE+ LA+P
Sbjct: 254 LNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKALDLLDKMLTFNPHKRIEVEQALAHP 313
Query: 322 FVTKRSSSSN 331
++ + S+
Sbjct: 314 YLAQYYDPSD 323
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 100/220 (45%), Gaps = 20/220 (9%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
+ D + LG G G V ++ + A+K+++ + E I L+ +
Sbjct: 6 VEDWDLVQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHE 65
Query: 106 FIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
+VK + + EG I ++ +E+ G LFD + + E ++++ G+ YLHG
Sbjct: 66 NVVKFYG--HRREGNIQYLFLEYCSGGELFDRIEPDIGMPEPDAQRFFHQLMAGVVYLHG 123
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM-GT 223
+ I H DIKP NLL++ + +KI+DFG++ + E + M GT
Sbjct: 124 IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNR-------------ERLLNKMCGT 170
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYP 263
Y++PE + + + DVWS G+V+ L G P
Sbjct: 171 LPYVAPELLKRREFHAE---PVDVWSCGIVLTAMLAGELP 207
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 98/224 (43%), Gaps = 20/224 (8%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L +G G G+VYK ++ + K+ I E ILK L IVK +
Sbjct: 7 LEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLY 66
Query: 112 AVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS-GVAYRVLKGLQYLHGMQIIHG 170
V +T + + V EH+++ L L V + E V + ++L G+ Y H +++H
Sbjct: 67 DVIHT-KKRLVLVFEHLDQ-DLKKLLDVCEGGLESVTAKSFLLQLLNGIAYCHDRRVLHR 124
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE 230
D+KP NLLIN +GE+KIADFG++R + T Y +P+
Sbjct: 125 DLKPQNLLINREGELKIADFGLARAFGIPVRKYTHE--------------IVTLWYRAPD 170
Query: 231 RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
+ + Y D+WS+G + E + G G E LM
Sbjct: 171 VLMGSK---KYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLM 211
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 32/273 (11%)
Query: 54 VLGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
+LG G G VY+ H+ A+K + + + EA I+K LD IVK
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 111 HAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHGMQI 167
+ IE E ++ ME G L L R K S V++ V Y ++ K + YL +
Sbjct: 91 IGI---IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC 146
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H DI N+L+ VK+ DFG+SR +E+ +A++ + +M
Sbjct: 147 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY------------KASVTRLPI-KWM 193
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERL 286
SPE ++ R + A DVW V + E L G P E D++ ++ G+RL
Sbjct: 194 SPESINFRR----FTTASDVWMFAVCMWEILSFGKQPFFWL-ENKDVIGVLEK---GDRL 245
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P+ P + C + D R EL+
Sbjct: 246 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 278
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 35/296 (11%)
Query: 34 PTSNPTS----PDVENI--SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI 87
PTS P + D I L+ LG G G V+ + + A+K L T+
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTM 221
Query: 88 IRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSE 145
EA+++K+L + +V+ +AV E I V E+M +GSL D L+ K L
Sbjct: 222 SPEAFLQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL 279
Query: 146 DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXX 205
+ +A ++ G+ Y+ M +H D++ +N+L+ K+ADFG++R++E+
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--- 336
Query: 206 XXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPL 264
A + +PE G + DVWS G+++ E G P
Sbjct: 337 ----------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 265 IGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
G + ++ + G R+ P + C K+ +R T E L A+
Sbjct: 383 PGMVNR----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 32/273 (11%)
Query: 54 VLGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
+LG G G VY+ H+ A+K + + + EA I+K LD IVK
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 111 HAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHGMQI 167
+ IE E ++ ME G L L R K S V++ V Y ++ K + YL +
Sbjct: 75 IGI---IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC 130
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H DI N+L+ VK+ DFG+SR +E+ +A++ + +M
Sbjct: 131 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY------------KASVTRLPI-KWM 177
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERL 286
SPE ++ R + A DVW V + E L G P E D++ ++ G+RL
Sbjct: 178 SPESINFRR----FTTASDVWMFAVCMWEILSFGKQPFFWL-ENKDVIGVLEK---GDRL 229
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P+ P + C + D R EL+
Sbjct: 230 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 262
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 35/296 (11%)
Query: 34 PTSNPTS----PDVENI--SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI 87
PTS P + D I L+ LG G G V+ + + A+K L T+
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTM 221
Query: 88 IRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSE 145
EA+++K+L + +V+ +AV E I V E+M +GSL D L+ K L
Sbjct: 222 SPEAFLQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL 279
Query: 146 DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXX 205
+ +A ++ G+ Y+ M +H D++ +N+L+ K+ADFG++R++E+
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--- 336
Query: 206 XXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPL 264
A + +PE G + DVWS G+++ E G P
Sbjct: 337 ----------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 265 IGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
G + ++ + G R+ P + C K+ +R T E L A+
Sbjct: 383 PGMVNR----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 109/239 (45%), Gaps = 33/239 (13%)
Query: 39 TSPDVENISDLKKL-TVLGHGNGGIVYKVRHQKSNSIYALKVLNTT----SSTIIRHQAA 93
T+P ++SD +L +LG G V+ R + + A+KVL S +R +
Sbjct: 5 TTP--SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-- 60
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEIC------FVMEHMERGSLFDSLRVRKKLSEDV 147
EA+ L+ IV AV+ T E E VME+++ +L D + ++
Sbjct: 61 REAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
V + L + H IIH D+KP+N+LI+ VK+ DFG++R + ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANILISATNAVKVVDFGIARAIADS-------- 169
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
+ + A A +GT Y+SPE+ G DV+SLG V+ E L G P G
Sbjct: 170 --GNSVXQTA-AVIGTAQYLSPEQA----RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 38/272 (13%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAV 113
V+G G G+V K + + + A+K + + S R E L R++ IVK +
Sbjct: 16 VVGRGAFGVVCKAKWRAKD--VAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYGA 70
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK---GLQYLHGMQ---I 167
+C VME+ E GSL++ L + L + L+ G+ YLH MQ +
Sbjct: 71 CLN---PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 127
Query: 168 IHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D+KP NLL+ G V KI DFG + ++ G+ A+
Sbjct: 128 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-----------------GSAAW 170
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERL 286
M+PE + G +Y DV+S G+++ E + P G ++ A+ G R
Sbjct: 171 MAPEVFE----GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP--AFRIMWAVHNGTRP 224
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + + C KD +R ++EE++
Sbjct: 225 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 256
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 117/273 (42%), Gaps = 32/273 (11%)
Query: 54 VLGHGNGGIVYK---VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
+LG G G VY+ H+ A+K + + + EA I+K LD IVK
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 111 HAVFYTIEGEICFV-MEHMERGSLFDSLRVRKKLSEDVISGVAY--RVLKGLQYLHGMQI 167
+ IE E ++ ME G L L R K S V++ V Y ++ K + YL +
Sbjct: 79 IGI---IEEEPTWIIMELYPYGELGHYLE-RNKNSLKVLTLVLYSLQICKAMAYLESINC 134
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
+H DI N+L+ VK+ DFG+SR +E+ +A++ + +M
Sbjct: 135 VHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYY------------KASVTRLPI-KWM 181
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERL 286
SPE ++ R + A DVW V + E L G P E D++ ++ G+RL
Sbjct: 182 SPESINFRR----FTTASDVWMFAVCMWEILSFGKQPFFWL-ENKDVIGVLEK---GDRL 233
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
P+ P + C + D R EL+
Sbjct: 234 PKPDLCPPVLYTLMTRCWDYDPSDRPRFTELVC 266
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 116/269 (43%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 16 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 71
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ K L + +A ++ G+ Y+ M +H D+
Sbjct: 72 -VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 130
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 131 RAANILVGENLVCKVADFGLARLIEDNEXT-------------ARQGAKFPIKWTAPEAA 177
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 178 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 229
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C K+ +R T E L A+
Sbjct: 230 CPESLHDLMCQCWRKEPEERPTFEYLQAF 258
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 11 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 61
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 62 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 119
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 120 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 176
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 177 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 220
Query: 261 H 261
Sbjct: 221 Q 221
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 10 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 60
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 118
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 175
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 176 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 219
Query: 261 H 261
Sbjct: 220 Q 220
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 10 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 60
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 118
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 175
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 176 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 219
Query: 261 H 261
Sbjct: 220 Q 220
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 31/267 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S+L + +G G G+V+ + + + A+K + + + EAE++ +L
Sbjct: 10 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPK 66
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKL-SEDVISGVAYRVLKGLQYLHGM 165
+V+ + V + IC V E ME G L D LR ++ L + + + G+ V +G+ YL
Sbjct: 67 LVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 125
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH D+ N L+ +K++DFG++R V + + ++
Sbjct: 126 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------------SSTGTKFPVK 172
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGE 284
+ SPE R Y DVWS GV++ E G P E ++ I G
Sbjct: 173 WASPEVFSFSR----YSSKSDVWSFGVLMWEVFSEGKIPY----ENRSNSEVVEDISTGF 224
Query: 285 RLEMPETASPEFRRFVRSCLEKDWRKR 311
RL P AS + + C WR+R
Sbjct: 225 RLYKPRLASTHVYQIMNHC----WRER 247
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/219 (28%), Positives = 97/219 (44%), Gaps = 32/219 (14%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLN----TTSSTIIRHQAAHEAEILKRLDSQ 105
+KL LG G VYK R + +N I A+K + + + I A E ++L+ L
Sbjct: 13 EKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHP 72
Query: 106 FIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK-----LSEDVISGVAYRVLKGLQ 160
I+ F + I V + ME L V K L+ I L+GL+
Sbjct: 73 NIIGLLDAFGH-KSNISLVFDFMET-----DLEVIIKDNSLVLTPSHIKAYMLMTLQGLE 126
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YLH I+H D+KP+NLL++ G +K+ADFG+++ A
Sbjct: 127 YLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSP--------------NRAYXHQ 172
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+ T Y +PE + R YG D+W++G ++ E L+
Sbjct: 173 VVTRWYRAPELLFGARM---YGVGVDMWAVGCILAELLL 208
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/272 (26%), Positives = 117/272 (43%), Gaps = 38/272 (13%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAV 113
V+G G G+V K + + + A+K + + S R E L R++ IVK +
Sbjct: 15 VVGRGAFGVVCKAKWRAKD--VAIKQIESESE---RKAFIVELRQLSRVNHPNIVKLYGA 69
Query: 114 FYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLK---GLQYLHGMQ---I 167
+C VME+ E GSL++ L + L + L+ G+ YLH MQ +
Sbjct: 70 CLN---PVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWCLQCSQGVAYLHSMQPKAL 126
Query: 168 IHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D+KP NLL+ G V KI DFG + ++ G+ A+
Sbjct: 127 IHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNK-----------------GSAAW 169
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERL 286
M+PE + G +Y DV+S G+++ E + P G ++ A+ G R
Sbjct: 170 MAPEVFE----GSNYSEKCDVFSWGIILWEVITRRKPFDEIGGP--AFRIMWAVHNGTRP 223
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + + C KD +R ++EE++
Sbjct: 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIV 255
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 124/289 (42%), Gaps = 35/289 (12%)
Query: 55 LGHGNGGIVYK--VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG GN G V + R +K A+KVL + + EA+I+ +LD+ +IV+
Sbjct: 18 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 77
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA---YRVLKGLQYLHGMQIIH 169
V + E ++ M G V K+ E +S VA ++V G++YL +H
Sbjct: 78 V---CQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVH 133
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
D+ N+L+ + KI+DFG+S+ + A A + +P
Sbjct: 134 RDLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-----------ARSAGKWPLKWYAP 182
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ + + DVWS GV + E L G P + P++MA I G+R+E
Sbjct: 183 ECINFRK----FSSRSDVWSYGVTMWEALSYGQKPYKKM-KGPEVMAFIEQ---GKRMEC 234
Query: 289 PETASPEFRRFVRSCLEKDWRKRG---TVEELLAYPFVTKRSSSSNIEG 334
P PE + C W R TVE+ + + S +S +EG
Sbjct: 235 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYY---SLASKVEG 280
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 26 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 81
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +G L D L+ + K L + +A ++ G+ Y+ M +H D+
Sbjct: 82 -VSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 140
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 141 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 187
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 188 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 239
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C KD +R T E L A+
Sbjct: 240 CPESLHDLMCQCWRKDPEERPTFEYLQAF 268
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 10 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 60
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDVVYLNLVLDYVPETVYRVARHYS-RAKQT 118
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 175
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 176 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 219
Query: 261 H 261
Sbjct: 220 Q 220
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 80/306 (26%), Positives = 126/306 (41%), Gaps = 56/306 (18%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVL-NTTSSTIIRHQAAHEAEILKRLDSQFIV 108
+ L +G G G V ++ + A+K L S + +A E +LK + + ++
Sbjct: 28 RDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVI 87
Query: 109 KCHAVFYTIEG-----EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF E + VM M G+ L +KL ED I + Y++LKGL+Y+H
Sbjct: 88 GLLDVFTPDETLDDFTDFYLVMPFM--GTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYIH 145
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP NL +N E+KI DFG++R + + T
Sbjct: 146 AAGIIHRDLKPGNLAVNEDCELKILDFGLARQAD-----------------SEMXGXVVT 188
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC-- 281
Y +PE + + W Y D+WS+G ++ E + G G + D + I +
Sbjct: 189 RWYRAPEVILN--WMR-YTQTVDIWSVGCIMAEMITGKTLFKG-SDHLDQLKEIMKVTGT 244
Query: 282 ----FGERLE----------MPE-----------TASPEFRRFVRSCLEKDWRKRGTVEE 316
F +RL+ +PE ASP + L D +R T E
Sbjct: 245 PPAEFVQRLQSDEAKNYMKGLPELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGE 304
Query: 317 LLAYPF 322
LA+P+
Sbjct: 305 ALAHPY 310
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 45/242 (18%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA- 92
P P P + +D K V+G+G+ G+VY+ + S + A+K +++ +A
Sbjct: 10 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIK-------KVLQGKAF 59
Query: 93 -AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRK 141
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQ 117
Query: 142 KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETR 200
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-- 175
Query: 201 XXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLV 259
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+
Sbjct: 176 -------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLL 218
Query: 260 GH 261
G
Sbjct: 219 GQ 220
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 14 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 64
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 65 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 122
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 123 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 179
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 180 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 223
Query: 261 H 261
Sbjct: 224 Q 224
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 19 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 74
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ K L + +A ++ G+ Y+ M +H D+
Sbjct: 75 -VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 133
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 134 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 180
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 181 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 232
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C K+ +R T E L A+
Sbjct: 233 CPESLHDLMCQCWRKEPEERPTFEYLQAF 261
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 10 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 60
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 61 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 118
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 119 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 175
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 176 ------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 219
Query: 261 H 261
Sbjct: 220 Q 220
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG ++++ EE G+ I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--------GKVPIK 186
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 187 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 229
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + +R C D R EL+
Sbjct: 230 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 23 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 73
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 74 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 131
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 132 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 188
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 189 ------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 232
Query: 261 H 261
Sbjct: 233 Q 233
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 63/241 (26%), Positives = 112/241 (46%), Gaps = 27/241 (11%)
Query: 42 DVENISDLKKLTV----LGHGNGGIVYK-VRHQKSNSIYALKVLNTTSSTIIRHQAAHEA 96
+V N D + ++V +G G G+VYK + + ++ L + ++ ++ Q E
Sbjct: 22 NVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEI 81
Query: 97 EILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV---RKKLSEDVISGVAY 153
+++ + + +V+ F + ++C V +M GSL D L LS + +A
Sbjct: 82 KVMAKCQHENLVELLG-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
G+ +LH IH DIK +N+L++ KI+DFG++R E+
Sbjct: 141 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSR------ 194
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL 273
+GT AYM+PE + G+ D++S GVV+LE + G P + +P L
Sbjct: 195 ------IVGTTAYMAPEAL-----RGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQL 242
Query: 274 M 274
+
Sbjct: 243 L 243
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/242 (27%), Positives = 113/242 (46%), Gaps = 45/242 (18%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA- 92
P P P + +D K V+G+G+ G+VY+ + S + A+K +++ +A
Sbjct: 10 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIK-------KVLQGKAF 59
Query: 93 -AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRK 141
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQ 117
Query: 142 KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETR 200
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-- 175
Query: 201 XXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLV 259
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+
Sbjct: 176 -------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLL 218
Query: 260 GH 261
G
Sbjct: 219 GQ 220
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 18 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 68
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 69 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 126
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 127 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 183
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 184 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 227
Query: 261 H 261
Sbjct: 228 Q 228
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 22 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 72
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 130
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 187
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 188 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 231
Query: 261 H 261
Sbjct: 232 Q 232
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 22 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 72
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 73 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 130
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 131 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 187
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 188 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 231
Query: 261 H 261
Sbjct: 232 Q 232
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/267 (25%), Positives = 115/267 (43%), Gaps = 31/267 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S+L + +G G G+V+ + + + A+K + S + EAE++ +L
Sbjct: 27 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIKEGSMS--EDDFIEEAEVMMKLSHPK 83
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKL-SEDVISGVAYRVLKGLQYLHGM 165
+V+ + V + IC V E ME G L D LR ++ L + + + G+ V +G+ YL
Sbjct: 84 LVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 142
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH D+ N L+ +K++DFG++R V + + ++
Sbjct: 143 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------------SSTGTKFPVK 189
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGE 284
+ SPE R Y DVWS GV++ E G P E ++ I G
Sbjct: 190 WASPEVFSFSR----YSSKSDVWSFGVLMWEVFSEGKIPY----ENRSNSEVVEDISTGF 241
Query: 285 RLEMPETASPEFRRFVRSCLEKDWRKR 311
RL P AS + + C W++R
Sbjct: 242 RLYKPRLASTHVYQIMNHC----WKER 264
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 120/283 (42%), Gaps = 31/283 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL----NTTSSTIIRHQAAHEAEILKRL 102
SDL VLG G G KV H+++ + +K L T T ++ E ++++ L
Sbjct: 10 SDLIHGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLK-----EVKVMRCL 64
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSL---FDSLRVRKKLSEDVISGVAYRVLKGL 159
+ ++K V Y + + F+ E+++ G+L S+ + S+ V A + G+
Sbjct: 65 EHPNVLKFIGVLYK-DKRLNFITEYIKGGTLRGIIKSMDSQYPWSQRV--SFAKDIASGM 121
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
YLH M IIH D+ N L+ V +ADFG++R++ + + +
Sbjct: 122 AYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYT 181
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG-FGEKPDLMALIC 278
+G +M+PE ++ G Y DV+S G+V+ E +IG PD +
Sbjct: 182 VVGNPYWMAPEMIN----GRSYDEKVDVFSFGIVLCE-------IIGRVNADPDYLPRTM 230
Query: 279 AICFGERLEM----PETASPEFRRFVRSCLEKDWRKRGTVEEL 317
R + P P F C + D KR + +L
Sbjct: 231 DFGLNVRGFLDRYCPPNCPPSFFPITVRCCDLDPEKRPSFVKL 273
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 76/262 (29%), Positives = 112/262 (42%), Gaps = 43/262 (16%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCH 111
L V+G G G V K K + ALK++ QAA E IL+ L Q
Sbjct: 102 LKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKR--FHRQAAEEIRILEHLRKQDKDNTM 159
Query: 112 AVF-----YTIEGEICFVMEHMERGSLFDSLRVRK--KLSEDVISGVAYRVLKGLQYLHG 164
V +T IC E + +L++ ++ K S ++ A+ +L+ L LH
Sbjct: 160 NVIHMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHK 218
Query: 165 MQIIHGDIKPSNLLI--NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
+IIH D+KP N+L+ G+ +K+ DFG S E R +
Sbjct: 219 NRIIHCDLKPENILLKQQGRSGIKVIDFG-SSCYEHQR----------------VYXXIQ 261
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
+ Y +PE + G YG D+WSLG ++ E L G YPL+ ++ D +A C
Sbjct: 262 SRFYRAPEVI----LGARYGMPIDMWSLGCILAELLTG-YPLLPGEDEGDQLA-----CM 311
Query: 283 GERLEMPET----ASPEFRRFV 300
E L MP AS + FV
Sbjct: 312 IELLGMPXQKLLDASKRAKNFV 333
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 29 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 79
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 80 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 137
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 138 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 194
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 195 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 238
Query: 261 H 261
Sbjct: 239 Q 239
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 44 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 94
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 152
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 209
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 210 ------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 253
Query: 261 H 261
Sbjct: 254 Q 254
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 56/242 (23%), Positives = 108/242 (44%), Gaps = 41/242 (16%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
++D + + LG G G+V++ +++ + YA+K + + + R + E + L +L+
Sbjct: 4 LTDFEPIQCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 63
Query: 106 FIVK-----------------CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE--- 145
IV+ V+ I+ ++C + +L D + R + E
Sbjct: 64 GIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLC------RKENLKDWMNGRCTIEERER 117
Query: 146 DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV---EETRXX 202
V + ++ + +++LH ++H D+KPSN+ VK+ DFG+ + EE +
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 203 XXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHY 262
G+ +GT YMSPE++ G Y D++SLG+++ E L Y
Sbjct: 178 LTPMPAYARHTGQ-----VGTKLYMSPEQIH----GNSYSHKVDIFSLGLILFELL---Y 225
Query: 263 PL 264
P
Sbjct: 226 PF 227
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI DF ++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDFYLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 31/267 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S+L + +G G G+V+ + + + A+K + + + EAE++ +L
Sbjct: 7 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPK 63
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKL-SEDVISGVAYRVLKGLQYLHGM 165
+V+ + V + IC V E ME G L D LR ++ L + + + G+ V +G+ YL
Sbjct: 64 LVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH D+ N L+ +K++DFG++R V + + ++
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------------SSTGTKFPVK 169
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGE 284
+ SPE R Y DVWS GV++ E G P E ++ I G
Sbjct: 170 WASPEVFSFSR----YSSKSDVWSFGVLMWEVFSEGKIPY----ENRSNSEVVEDISTGF 221
Query: 285 RLEMPETASPEFRRFVRSCLEKDWRKR 311
RL P AS + + C W++R
Sbjct: 222 RLYKPRLASTHVYQIMNHC----WKER 244
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 113/241 (46%), Gaps = 27/241 (11%)
Query: 42 DVENISDLKKLTV----LGHGNGGIVYK-VRHQKSNSIYALKVLNTTSSTIIRHQAAHEA 96
+V N D + ++V +G G G+VYK + + ++ L + ++ ++ Q E
Sbjct: 22 NVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEI 81
Query: 97 EILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV---RKKLSEDVISGVAY 153
+++ + + +V+ F + ++C V +M GSL D L LS + +A
Sbjct: 82 KVMAKCQHENLVELLG-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 140
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
G+ +LH IH DIK +N+L++ KI+DFG++R E+
Sbjct: 141 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXR------ 194
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL 273
+GT AYM+PE + G+ D++S GVV+LE + G P + +P L
Sbjct: 195 ------IVGTTAYMAPEAL-----RGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQL 242
Query: 274 M 274
+
Sbjct: 243 L 243
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 76/306 (24%), Positives = 133/306 (43%), Gaps = 38/306 (12%)
Query: 37 NPTSPDVENI----SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA 92
+P+SP+ + +D+ LG G G VY+ +K + A+K L T+ +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEF 61
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISG 150
EA ++K + +V+ V T E + E M G+L D LR R+++S V+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLY 120
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+A ++ ++YL IH D+ N L+ VK+ADFG+SR++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------------- 166
Query: 211 XXIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIG 266
G+ A G + +PE + + + DVW+ GV++ E G P G
Sbjct: 167 --TGDTYTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTK 325
DL + + R+E PE + +R+C + + R + E+ A+ + +
Sbjct: 221 I----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
Query: 326 RSSSSN 331
SS S+
Sbjct: 277 ESSISD 282
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 38 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 88
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 89 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 146
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 147 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 203
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 204 ------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 247
Query: 261 H 261
Sbjct: 248 Q 248
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 275 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 330
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ K L + +A ++ G+ Y+ M +H D+
Sbjct: 331 -VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDL 389
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 390 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 436
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 437 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 488
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C K+ +R T E L A+
Sbjct: 489 CPESLHDLMCQCWRKEPEERPTFEYLQAF 517
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/296 (24%), Positives = 124/296 (41%), Gaps = 35/296 (11%)
Query: 34 PTSNPTS----PDVENI--SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI 87
PTS P + D I L+ LG G G V+ + + A+K L T+
Sbjct: 165 PTSKPQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTM 221
Query: 88 IRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSE 145
EA+++K+L + +V+ +AV E I V E+M +GSL D L+ K L
Sbjct: 222 SPEAFLQEAQVMKKLRHEKLVQLYAV--VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRL 279
Query: 146 DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXX 205
+ +A ++ G+ Y+ M +H D++ +N+L+ K+ADFG++R++E+
Sbjct: 280 PQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYT--- 336
Query: 206 XXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPL 264
A + +PE G + DVWS G+++ E G P
Sbjct: 337 ----------ARQGAKFPIKWTAPEAALY----GRFTIKSDVWSFGILLTELTTKGRVPY 382
Query: 265 IGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
G + ++ + G R+ P + C K+ +R T E L A+
Sbjct: 383 PGMVNR----EVLDQVERGYRMPCPPECPESLHDLMCQCWRKEPEERPTFEYLQAF 434
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 37/270 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S+L + +G G G+V+ + + + A+K + + + EAE++ +L
Sbjct: 8 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPK 64
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKL-SEDVISGVAYRVLKGLQYLHGM 165
+V+ + V + IC V E ME G L D LR ++ L + + + G+ V +G+ YL
Sbjct: 65 LVQLYGVCLE-QAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 123
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT-- 223
+IH D+ N L+ +K++DFG++R V + + + GT
Sbjct: 124 CVIHRDLAARNCLVGENQVIKVSDFGMTRFV----------------LDDQYTSSTGTKF 167
Query: 224 -CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAIC 281
+ SPE R Y DVWS GV++ E G P E ++ I
Sbjct: 168 PVKWASPEVFSFSR----YSSKSDVWSFGVLMWEVFSEGKIPY----ENRSNSEVVEDIS 219
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
G RL P AS + + C WR+R
Sbjct: 220 TGFRLYKPRLASTHVYQIMNHC----WRER 245
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 117/277 (42%), Gaps = 39/277 (14%)
Query: 54 VLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G G V R + K A+K L + R EA I+ + D I+
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIHL 88
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVIS--GVAYRVLKGLQYLHGMQII 168
V T + V E+ME GSL D+ + VI G+ + G++YL M +
Sbjct: 89 EGVV-TKSKPVMIVTEYMENGSL-DTFLKKNDGQFTVIQLVGMLRGISAGMKYLSDMGYV 146
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG---TCA 225
H D+ N+LIN K++DFG+SR++E+ EAA G
Sbjct: 147 HRDLAARNILINSNLVCKVSDFGLSRVLEDD--------------PEAAYTTRGGKIPIR 192
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL----MALICAIC 281
+ +PE + + + A DVWS G+V+ E ++ +GE+P +I A+
Sbjct: 193 WTAPEAIAFRK----FTSASDVWSYGIVMWE-------VVSYGERPYWEMTNQDVIKAVE 241
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
G RL P + + C +K+ R +E++
Sbjct: 242 EGYRLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIV 278
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 39 TSPDVENISDLKKL-TVLGHGNGGIVYKVRHQKSNSIYALKVLNTT----SSTIIRHQAA 93
T+P ++SD +L +LG G V+ R + + A+KVL S +R +
Sbjct: 5 TTP--SHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFR-- 60
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEIC------FVMEHMERGSLFDSLRVRKKLSEDV 147
EA+ L+ IV AV+ T E E VME+++ +L D + ++
Sbjct: 61 REAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
V + L + H IIH D+KP+N++I+ VK+ DFG++R + ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
A +GT Y+SPE+ G DV+SLG V+ E L G P G
Sbjct: 178 -----------AVIGTAQYLSPEQA----RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 44 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 94
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 95 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 152
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 153 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 209
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 210 ------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 253
Query: 261 H 261
Sbjct: 254 Q 254
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 15 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 65
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 66 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 123
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 124 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 180
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 181 ------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 224
Query: 261 H 261
Sbjct: 225 Q 225
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 108/229 (47%), Gaps = 43/229 (18%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
D K++ ++G G G V+K +H+ Y +K + + +A E + L +LD I
Sbjct: 12 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNN-----EKAEREVKALAKLDHVNI 66
Query: 108 VKCHAVFYTIEGE---------------ICFVMEHMERGSLFDSLRVRK--KLSEDVISG 150
V + + + + + ME ++G+L + R+ KL + +
Sbjct: 67 VHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDKVLALE 126
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFG-VSRIVEETRXXXXXXXXX 209
+ ++ KG+ Y+H ++I+ D+KPSN+ + +VKI DFG V+ + + +
Sbjct: 127 LFEQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXR------ 180
Query: 210 XXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
GT YMSPE++ S+ DYG D+++LG+++ E L
Sbjct: 181 ----------SKGTLRYMSPEQISSQ----DYGKEVDLYALGLILAELL 215
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 114/241 (47%), Gaps = 27/241 (11%)
Query: 42 DVENISDLKKLTV----LGHGNGGIVYK-VRHQKSNSIYALKVLNTTSSTIIRHQAAHEA 96
+V N D + ++V +G G G+VYK + + ++ L + ++ ++ Q E
Sbjct: 16 NVTNNFDERPISVGGNKMGEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEI 75
Query: 97 EILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV---RKKLSEDVISGVAY 153
+++ + + +V+ F + ++C V +M GSL D L LS + +A
Sbjct: 76 KVMAKCQHENLVELLG-FSSDGDDLCLVYVYMPNGSLLDRLSCLDGTPPLSWHMRCKIAQ 134
Query: 154 RVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXI 213
G+ +LH IH DIK +N+L++ KI+DFG++R E+
Sbjct: 135 GAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXR------ 188
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL 273
+GT AYM+PE + G+ D++S GVV+LE + G P + +P L
Sbjct: 189 ------IVGTTAYMAPEAL-----RGEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQL 236
Query: 274 M 274
+
Sbjct: 237 L 237
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 48 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 98
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 99 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 156
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 157 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 213
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 214 ------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 257
Query: 261 H 261
Sbjct: 258 Q 258
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 79/304 (25%), Positives = 126/304 (41%), Gaps = 59/304 (19%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSIYALKVLNTT-SSTIIRHQAAHEAEILKRLDSQFIVKCH 111
T +G G G V ++S A+K L+ S I +A E +LK + + ++
Sbjct: 30 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 89
Query: 112 AVFYTIEG-----EICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGM 165
VF + VM M+ D ++ K SE+ I + Y++LKGL+Y+H
Sbjct: 90 DVFTPASSLRNFYDFYLVMPFMQT----DLQKIMGLKFSEEKIQYLVYQMLKGLKYIHSA 145
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
++H D+KP NL +N E+KI DFG++R + + T
Sbjct: 146 GVVHRDLKPGNLAVNEDCELKILDFGLARHAD-----------------AEMTGYVVTRW 188
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC---- 281
Y +PE + S W Y D+WS+G ++ E L G G + D + I +
Sbjct: 189 YRAPEVILS--W-MHYNQTVDIWSVGCIMAEMLTGKTLFKG-KDYLDQLTQILKVTGVPG 244
Query: 282 --FGERLE----------MPET-----------ASPEFRRFVRSCLEKDWRKRGTVEELL 318
F ++L +P+T ASP+ + LE D KR T + L
Sbjct: 245 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 304
Query: 319 AYPF 322
+PF
Sbjct: 305 THPF 308
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 46 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 96
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 97 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 154
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 155 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 211
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 212 ------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 255
Query: 261 H 261
Sbjct: 256 Q 256
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 111/241 (46%), Gaps = 43/241 (17%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQA 92
P P P + +D K V+G+G+ G+VY+ + S + A+K VL +
Sbjct: 89 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIKKVLQD------KRFK 139
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRKK 142
E +I+++LD IV+ FY+ GE + +V E + R + S R ++
Sbjct: 140 NRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPETVYRVARHYS-RAKQT 197
Query: 143 LSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETRX 201
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 198 LPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR--- 254
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVG 260
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+G
Sbjct: 255 ------------GEPNVSYICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLLG 298
Query: 261 H 261
Sbjct: 299 Q 299
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 78
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ K L + ++ ++ G+ Y+ M +H D+
Sbjct: 79 -VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEYT-------------ARQGAKFPIKWTAPEAA 184
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 185 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 236
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C K+ +R T E L A+
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAF 265
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 115/269 (42%), Gaps = 29/269 (10%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V+ + + A+K L T+ EA+++K+L + +V+ +AV
Sbjct: 23 LGQGCFGEVWMGTWNGTTRV-AIKTLK--PGTMSPEAFLQEAQVMKKLRHEKLVQLYAV- 78
Query: 115 YTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDI 172
E I V E+M +GSL D L+ K L + ++ ++ G+ Y+ M +H D+
Sbjct: 79 -VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASGMAYVERMNYVHRDL 137
Query: 173 KPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERV 232
+ +N+L+ K+ADFG++R++E+ A + +PE
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWT-------------ARQGAKFPIKWTAPEAA 184
Query: 233 DSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGERLEMPET 291
G + DVWS G+++ E G P G + ++ + G R+ P
Sbjct: 185 LY----GRFTIKSDVWSFGILLTELTTKGRVPYPGMVNR----EVLDQVERGYRMPCPPE 236
Query: 292 ASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ C K+ +R T E L A+
Sbjct: 237 CPESLHDLMCQCWRKEPEERPTFEYLQAF 265
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 126/291 (43%), Gaps = 37/291 (12%)
Query: 37 NPTSPDVENI----SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA 92
+P+SP+ + +D+ LG G G VY+ +K + A+K L T+ +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEF 61
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISG 150
EA ++K + +V+ V T E ++E M G+L D LR R++++ V+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVC-TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+A ++ ++YL IH D+ N L+ VK+ADFG+SR++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------------- 166
Query: 211 XXIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIG 266
G+ A G + +PE + + + DVW+ GV++ E G P G
Sbjct: 167 --TGDTYTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
DL + + R+E PE + +R+C + + R + E+
Sbjct: 221 I----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 25 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 84
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 85 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 142
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 143 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 194
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 195 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 237
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + +R C D R EL+
Sbjct: 238 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 280
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 123/291 (42%), Gaps = 35/291 (12%)
Query: 55 LGHGNGGIVYK--VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG GN G V + R +K A+KVL + + EA+I+ +LD+ +IV+
Sbjct: 344 LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIG 403
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA---YRVLKGLQYLHGMQIIH 169
V + E ++ M G V K+ E +S VA ++V G++YL +H
Sbjct: 404 V---CQAEALMLVMEMAGGGPLHKFLVGKR-EEIPVSNVAELLHQVSMGMKYLEEKNFVH 459
Query: 170 GDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
++ N+L+ + KI+DFG+S+ + A A + +P
Sbjct: 460 RNLAARNVLLVNRHYAKISDFGLSKALGADDSYYT-----------ARSAGKWPLKWYAP 508
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEM 288
E ++ + + DVWS GV + E L G P + P++MA I G+R+E
Sbjct: 509 ECINFRK----FSSRSDVWSYGVTMWEALSYGQKPYKKM-KGPEVMAFIEQ---GKRMEC 560
Query: 289 PETASPEFRRFVRSCLEKDWRKRG---TVEELL---AYPFVTKRSSSSNIE 333
P PE + C W R TVE+ + Y +K S +E
Sbjct: 561 PPECPPELYALMSDCWIYKWEDRPDFLTVEQRMRACYYSLASKVEGGSALE 611
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI FG++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILGFGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI D G++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDAGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/267 (25%), Positives = 115/267 (43%), Gaps = 31/267 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S+L + +G G G+V+ + + + A+K + + + EAE++ +L
Sbjct: 7 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPK 63
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKL-SEDVISGVAYRVLKGLQYLHGM 165
+V+ + V + IC V E ME G L D LR ++ L + + + G+ V +G+ YL
Sbjct: 64 LVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 122
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IH D+ N L+ +K++DFG++R V + + ++
Sbjct: 123 CVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYT-------------SSTGTKFPVK 169
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAICFGE 284
+ SPE R Y DVWS GV++ E G P E ++ I G
Sbjct: 170 WASPEVFSFSR----YSSKSDVWSFGVLMWEVFSEGKIPY----ENRSNSEVVEDISTGF 221
Query: 285 RLEMPETASPEFRRFVRSCLEKDWRKR 311
RL P AS + + C W++R
Sbjct: 222 RLYKPRLASTHVYQIMNHC----WKER 244
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 78 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 187
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 188 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 230
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + +R C D R EL+
Sbjct: 231 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 273
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 73/286 (25%), Positives = 124/286 (43%), Gaps = 37/286 (12%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
+ S +K V+G G G V R + K + A+K L + R EA I+ +
Sbjct: 41 DASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYTEKQRRDFLCEASIMGQ 100
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
D +V V T + V+E ME G+L LR + + + G+ + G++
Sbjct: 101 FDHPNVVHLEGVV-TRGKPVMIVIEFMENGALDAFLRKHDGQFTVIQLVGMLRGIAAGMR 159
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL M +H D+ N+L+N K++DFG+SR++E+ EA
Sbjct: 160 YLADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDD--------------PEAVYTT 205
Query: 221 MG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP--DL-- 273
G + +PE + + + A DVWS G+V+ E ++ +GE+P D+
Sbjct: 206 TGGKIPVRWTAPEAIQYRK----FTSASDVWSYGIVMWE-------VMSYGERPYWDMSN 254
Query: 274 MALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+I AI G RL P + + C +K+ +R E+++
Sbjct: 255 QDVIKAIEEGYRLPAPMDCPAGLHQLMLDCWQKERAERPKFEQIVG 300
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/279 (22%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
N+ +LK L +G G G V + + N + A+K + ++ EA ++ +L
Sbjct: 191 NMKELKLLQTIGKGEFGDVM-LGDYRGNKV-AVKCIKNDATA---QAFLAEASVMTQLRH 245
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK--LSEDVISGVAYRVLKGLQYL 162
+V+ V +G + V E+M +GSL D LR R + L D + + V + ++YL
Sbjct: 246 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 305
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
G +H D+ N+L++ K++DFG+++ T+ G+ +
Sbjct: 306 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----------DTGKLPV---- 350
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMALIC 278
+ +PE + ++ + DVWS G+++ E + FG P L ++
Sbjct: 351 --KWTAPEALREKK----FSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKDVVP 397
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ G +++ P+ P +++C D R T +L
Sbjct: 398 RVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQL 436
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 71.2 bits (173), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 39 TSPDVENISDLKKL-TVLGHGNGGIVYKVRHQKSNSIYALKVLNTT----SSTIIRHQAA 93
T+P ++SD +L +LG G V+ R + + A+KVL S +R +
Sbjct: 5 TTP--SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-- 60
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEIC------FVMEHMERGSLFDSLRVRKKLSEDV 147
EA+ L+ IV AV+ T E E VME+++ +L D + ++
Sbjct: 61 REAQNAAALNHPAIV---AVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
V + L + H IIH D+KP+N++I+ VK+ DFG++R + ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
A +GT Y+SPE+ G DV+SLG V+ E L G P G
Sbjct: 178 -----------AVIGTAQYLSPEQA----RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 116/270 (42%), Gaps = 37/270 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
S+L + +G G G+V+ + + + A+K + + + EAE++ +L
Sbjct: 5 SELTFVQEIGSGQFGLVH-LGYWLNKDKVAIKTIREGAMS--EEDFIEEAEVMMKLSHPK 61
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKL-SEDVISGVAYRVLKGLQYLHGM 165
+V+ + V + IC V E ME G L D LR ++ L + + + G+ V +G+ YL
Sbjct: 62 LVQLYGVCLE-QAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLGMCLDVCEGMAYLEEA 120
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT-- 223
+IH D+ N L+ +K++DFG++R V + + + GT
Sbjct: 121 CVIHRDLAARNCLVGENQVIKVSDFGMTRFV----------------LDDQYTSSTGTKF 164
Query: 224 -CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICAIC 281
+ SPE R Y DVWS GV++ E G P E ++ I
Sbjct: 165 PVKWASPEVFSFSR----YSSKSDVWSFGVLMWEVFSEGKIPY----ENRSNSEVVEDIS 216
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKR 311
G RL P AS + + C W++R
Sbjct: 217 TGFRLYKPRLASTHVYQIMNHC----WKER 242
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 37 NPTSPDVENI----SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA 92
+P+SP+ + +D+ LG G G VY+ +K + A+K L T+ +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEF 61
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISG 150
EA ++K + +V+ V T E + E M G+L D LR R++++ V+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+A ++ ++YL IH D+ N L+ VK+ADFG+SR++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------------- 166
Query: 211 XXIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIG 266
G+ A G + +PE + + + DVW+ GV++ E G P G
Sbjct: 167 --TGDTXTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
DL + + R+E PE + +R+C + + R + E+
Sbjct: 221 I----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 72/278 (25%), Positives = 126/278 (45%), Gaps = 33/278 (11%)
Query: 44 ENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLD 103
E+I +KKL G G G V+ + S + A+K L + ++ EA ++K L
Sbjct: 12 ESIKLVKKL---GAGQFGEVWMGYYNNSTKV-AVKTLKPGTMSV--QAFLEEANLMKTLQ 65
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR---KKLSEDVISGVAYRVLKGLQ 160
+V+ +AV T E I + E M +GSL D L+ K L +I A ++ +G+
Sbjct: 66 HDKLVRLYAVV-TKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSA-QIAEGMA 123
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
Y+ IH D++ +N+L++ KIADFG++R++E+ A
Sbjct: 124 YIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYT-------------AREGA 170
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICA 279
+ +PE ++ G + +VWS G+++ E + G P G D+M+ A
Sbjct: 171 KFPIKWTAPEAINF----GCFTIKSNVWSFGILLYEIVTYGKIPYPG-RTNADVMS---A 222
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ G R+ E E ++ C ++ +R T + L
Sbjct: 223 LSQGYRMPRMENCPDELYDIMKMCWKEKAEERPTFDYL 260
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
+ S +K V+G G G V R + K A+K L + R EA I+ +
Sbjct: 27 DASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ 86
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
D I+ V + + + E+ME GSL LR + + + G+ + G++
Sbjct: 87 FDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 145
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL M +H D+ N+L+N K++DFG+SR++E+ EAA
Sbjct: 146 YLSDMSAVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD--------------PEAAYTT 191
Query: 221 MG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP--DL-- 273
G + +PE + + + A DVWS G+V+ E ++ +GE+P D+
Sbjct: 192 RGGKIPIRWTAPEAIAYRK----FTSASDVWSYGIVMWE-------VMSYGERPYWDMSN 240
Query: 274 MALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR-------GTVEELLAYPFVTKR 326
+I AI G RL P + + C +K+ R +++L+ P KR
Sbjct: 241 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 300
Query: 327 SSSSN 331
+ S +
Sbjct: 301 TGSES 305
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 75/306 (24%), Positives = 133/306 (43%), Gaps = 38/306 (12%)
Query: 37 NPTSPDVENI----SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA 92
+P+SP+ + +D+ LG G G VY+ +K + A+K L T+ +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEF 61
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISG 150
EA ++K + +V+ V T E + E M G+L D LR R++++ V+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+A ++ ++YL IH D+ N L+ VK+ADFG+SR++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------------- 166
Query: 211 XXIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIG 266
G+ A G + +PE + + + DVW+ GV++ E G P G
Sbjct: 167 --TGDTYTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTK 325
DL + + R+E PE + +R+C + + R + E+ A+ + +
Sbjct: 221 I----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQ 276
Query: 326 RSSSSN 331
SS S+
Sbjct: 277 ESSISD 282
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI D G++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDRGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 125/291 (42%), Gaps = 37/291 (12%)
Query: 37 NPTSPDVENI----SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA 92
+P+SP+ + +D+ LG G G VY+ +K + A+K L T+ +
Sbjct: 4 DPSSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEF 61
Query: 93 AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISG 150
EA ++K + +V+ V T E + E M G+L D LR R++++ V+
Sbjct: 62 LKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLY 120
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+A ++ ++YL IH D+ N L+ VK+ADFG+SR++
Sbjct: 121 MATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM-------------- 166
Query: 211 XXIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIG 266
G+ A G + +PE + + + DVW+ GV++ E G P G
Sbjct: 167 --TGDTYTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPG 220
Query: 267 FGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
DL + + R+E PE + +R+C + + R + E+
Sbjct: 221 I----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 76 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 185
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 186 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 228
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 229 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 106/239 (44%), Gaps = 33/239 (13%)
Query: 39 TSPDVENISDLKKL-TVLGHGNGGIVYKVRHQKSNSIYALKVLNTT----SSTIIRHQAA 93
T+P ++SD +L +LG G V+ R + + A+KVL S +R +
Sbjct: 5 TTP--SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFR-- 60
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEIC------FVMEHMERGSLFDSLRVRKKLSEDV 147
EA+ L+ IV AV+ T E E VME+++ +L D + ++
Sbjct: 61 REAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKR 117
Query: 148 ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXX 207
V + L + H IIH D+KP+N++I+ VK+ DFG++R + ++
Sbjct: 118 AIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTA 177
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
A +GT Y+SPE+ G DV+SLG V+ E L G P G
Sbjct: 178 -----------AVIGTAQYLSPEQA----RGDSVDARSDVYSLGCVLYEVLTGEPPFTG 221
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 184
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 185 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 227
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + +R C D R EL+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 270
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 70.9 bits (172), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 16 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 75
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 76 DNPHV--CRLLGICLTSTVQLIMQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 133
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 134 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 185
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 186 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 228
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 229 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 271
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 79 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 188
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 189 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 231
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 232 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 184
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 185 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 227
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 186
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 187 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 229
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 230 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 115/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 78 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 187
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 188 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 230
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 231 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 69/275 (25%), Positives = 116/275 (42%), Gaps = 29/275 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
+IS +K V+G G G V + K A+K L + + R EA I+ +
Sbjct: 31 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 90
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
D ++ V T + + E ME GSL LR + + + G+ + G++
Sbjct: 91 FDHPNVIHLEGVV-TKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 149
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL M +H D+ N+L+N K++DFG+SR +E+ +A+
Sbjct: 150 YLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT---------SALGG 200
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP--DL--MAL 276
+ +PE + + + A DVWS G+V+ E ++ +GE+P D+ +
Sbjct: 201 KIPIRWTAPEAIQYRK----FTSASDVWSYGIVMWE-------VMSYGERPYWDMTNQDV 249
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I AI RL P + + C +KD R
Sbjct: 250 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 284
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 103/216 (47%), Gaps = 26/216 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L+ +G G G V K+ A+K L+ +II + + E +LK + + ++
Sbjct: 25 QNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVI 84
Query: 109 KCHAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHG 164
VF E +++ H+ G+ +++ +KL++D + + Y++L+GL+Y+H
Sbjct: 85 GLLDVFTPARSLEEFNDVYLVTHL-MGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIHS 143
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
IIH D+KPSNL +N E+KI D G++R + + + T
Sbjct: 144 ADIIHRDLKPSNLAVNEDCELKILDGGLARHTD-----------------DEMTGYVATR 186
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + W Y D+WS+G ++ E L G
Sbjct: 187 WYRAPEIM--LNWMH-YNQTVDIWSVGCIMAELLTG 219
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
+ S +K V+G G G V R + K A+K L + R EA I+ +
Sbjct: 6 DASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ 65
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
D I+ V + + + E+ME GSL LR + + + G+ + G++
Sbjct: 66 FDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 124
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL M +H D+ N+L+N K++DFG+SR++E+ EAA
Sbjct: 125 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD--------------PEAAYTT 170
Query: 221 MG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP--DL-- 273
G + +PE + + + A DVWS G+V+ E ++ +GE+P D+
Sbjct: 171 RGGKIPIRWTAPEAIAYRK----FTSASDVWSYGIVMWE-------VMSYGERPYWDMSN 219
Query: 274 MALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR-------GTVEELLAYPFVTKR 326
+I AI G RL P + + C +K+ R +++L+ P KR
Sbjct: 220 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 279
Query: 327 SSSSN 331
+ S +
Sbjct: 280 TGSES 284
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 127/284 (44%), Gaps = 42/284 (14%)
Query: 44 ENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLD 103
E I+ LK+L G G G+V K+ K A+K++ S + + EA+ + +L
Sbjct: 8 EEITLLKEL---GSGQFGVV-KLGKWKGQYDVAVKMIKEGSMS--EDEFFQEAQTMMKLS 61
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK-LSEDVISGVAYRVLKGLQYL 162
+VK + V + E I V E++ G L + LR K L + + Y V +G+ +L
Sbjct: 62 HPKLVKFYGVC-SKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQLLEMCYDVCEGMAFL 120
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
Q IH D+ N L++ VK++DFG++R V + + ++ +G
Sbjct: 121 ESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYV----------------LDDQYVSSVG 164
Query: 223 T---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP-DLMA--- 275
T + +PE + Y DVW+ G+++ E + G+ P DL
Sbjct: 165 TKFPVKWSAPEVFHYFK----YSSKSDVWAFGILMWE-------VFSLGKMPYDLYTNSE 213
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
++ + G RL P AS + + SC + KR T ++LL+
Sbjct: 214 VVLKVSQGHRLYRPHLASDTIYQIMYSCWHELPEKRPTFQQLLS 257
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 77/305 (25%), Positives = 130/305 (42%), Gaps = 44/305 (14%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
+ S +K V+G G G V R + K A+K L + R EA I+ +
Sbjct: 12 DASCIKIEKVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQ 71
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
D I+ V + + + E+ME GSL LR + + + G+ + G++
Sbjct: 72 FDHPNIIHLEGVVTKCK-PVMIITEYMENGSLDAFLRKNDGRFTVIQLVGMLRGIGSGMK 130
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL M +H D+ N+L+N K++DFG+SR++E+ EAA
Sbjct: 131 YLSDMSYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDD--------------PEAAYTT 176
Query: 221 MG---TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP--DL-- 273
G + +PE + + + A DVWS G+V+ E ++ +GE+P D+
Sbjct: 177 RGGKIPIRWTAPEAIAYRK----FTSASDVWSYGIVMWE-------VMSYGERPYWDMSN 225
Query: 274 MALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR-------GTVEELLAYPFVTKR 326
+I AI G RL P + + C +K+ R +++L+ P KR
Sbjct: 226 QDVIKAIEEGYRLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRNPNSLKR 285
Query: 327 SSSSN 331
+ S +
Sbjct: 286 TGSES 290
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 45/242 (18%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQA- 92
P P P + +D K V+G+G+ G+VY+ + S + A+K +++ +A
Sbjct: 10 PGQGPDRPQEVSYTDTK---VIGNGSFGVVYQAKLCDSGELVAIK-------KVLQGKAF 59
Query: 93 -AHEAEILKRLDSQFIVKCHAVFYTIEGE----------ICFVMEHMERGSLFDSLRVRK 141
E +I+++LD IV+ FY+ GE + +V + R + S R ++
Sbjct: 60 KNRELQIMRKLDHCNIVRLRYFFYS-SGEKKDEVYLNLVLDYVPATVYRVARHYS-RAKQ 117
Query: 142 KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEV-KIADFGVSRIVEETR 200
L + Y++ + L Y+H I H DIKP NLL++ V K+ DFG ++ +
Sbjct: 118 TLPVIYVKLYMYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVR-- 175
Query: 201 XXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLV 259
GE ++ + + Y +PE + +G DY + DVWS G V+ E L+
Sbjct: 176 -------------GEPNVSXICSRYYRAPELI----FGATDYTSSIDVWSAGCVLAELLL 218
Query: 260 GH 261
G
Sbjct: 219 GQ 220
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 117/278 (42%), Gaps = 38/278 (13%)
Query: 54 VLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
V+G G G VYK K A+K L + R EA I+ + I++
Sbjct: 51 VIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIR 110
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQII 168
V + + + E+ME G+L LR + + S + G+ + G++YL M +
Sbjct: 111 LEGVISKYK-PMMIITEYMENGALDKFLREKDGEFSVLQLVGMLRGIAAGMKYLANMNYV 169
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG---TCA 225
H D+ N+L+N K++DFG+SR++E+ EA G
Sbjct: 170 HRDLAARNILVNSNLVCKVSDFGLSRVLEDD--------------PEATYTTSGGKIPIR 215
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMALICAIC 281
+ +PE + + + A DVWS G+V+ E + +GE+P ++ AI
Sbjct: 216 WTAPEAISYRK----FTSASDVWSFGIVMWEVMT-------YGERPYWELSNHEVMKAIN 264
Query: 282 FGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
G RL P + + C +++ +R ++++
Sbjct: 265 DGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVS 302
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 108/259 (41%), Gaps = 21/259 (8%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
+KL +G G G+VYK + + + ++ I A E +LK L IV
Sbjct: 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK-LSEDVISGVAYRVLKGLQYLHGMQII 168
V ++ E + V E ME+ L L K L + I Y++L+G+ + H +I+
Sbjct: 84 LIDVIHS-ERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+KP NLLIN G +K+ADFG++R E T Y +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLAR---------AFGIPVRSYTHEVV-----TLWYRA 187
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEM 288
P+ + + Y + D+WS+G + E + G G + L + + E
Sbjct: 188 PDVLMGSK---KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 289 PETAS-PEFRRFVRSCLEK 306
P+ P +++ EK
Sbjct: 245 PQVQELPLWKQRTFQVFEK 263
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 108/242 (44%), Gaps = 33/242 (13%)
Query: 36 SNPTSPDVENISDLKKL-TVLGHGNGGIVYKVRHQKSNSIYALKVLNTT----SSTIIRH 90
S+ T+P ++SD +L +LG G V+ R + + A+KVL S +R
Sbjct: 19 SHMTTP--SHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRF 76
Query: 91 QAAHEAEILKRLDSQFIVKCHAVFYTIEGEIC------FVMEHMERGSLFDSLRVRKKLS 144
+ EA+ L+ IV AV+ T E E VME+++ +L D + ++
Sbjct: 77 R--REAQNAAALNHPAIV---AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMT 131
Query: 145 EDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXX 204
V + L + H IIH D+KP+N++I+ VK+ DFG++R + ++
Sbjct: 132 PKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVT 191
Query: 205 XXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL 264
A +GT Y+SPE+ G DV+SLG V+ E L G P
Sbjct: 192 QTA-----------AVIGTAQYLSPEQA----RGDSVDARSDVYSLGCVLYEVLTGEPPF 236
Query: 265 IG 266
G
Sbjct: 237 TG 238
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 65/259 (25%), Positives = 109/259 (42%), Gaps = 21/259 (8%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
+KL +G G G+VYK + + + ++ I A E +LK L IV
Sbjct: 24 QKLEKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVS 83
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK-LSEDVISGVAYRVLKGLQYLHGMQII 168
V ++ E + V E ME+ L L K L + I Y++L+G+ + H +I+
Sbjct: 84 LIDVIHS-ERCLTLVFEFMEK-DLKKVLDENKTGLQDSQIKIYLYQLLRGVAHCHQHRIL 141
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+KP NLLIN G +K+ADFG++R + + T Y +
Sbjct: 142 HRDLKPQNLLINSDGALKLADFGLAR--------------AFGIPVRSYTHEVVTLWYRA 187
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEM 288
P+ + + Y + D+WS+G + E + G G + L + + E
Sbjct: 188 PDVLMGSK---KYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREW 244
Query: 289 PETAS-PEFRRFVRSCLEK 306
P+ P +++ EK
Sbjct: 245 PQVQELPLWKQRTFQVFEK 263
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 78/304 (25%), Positives = 126/304 (41%), Gaps = 59/304 (19%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSIYALKVLNTT-SSTIIRHQAAHEAEILKRLDSQFIVKCH 111
T +G G G V ++S A+K L+ S I +A E +LK + + ++
Sbjct: 48 THVGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLL 107
Query: 112 AVFYTIEG-----EICFVMEHMERGSLFDSLRVR-KKLSEDVISGVAYRVLKGLQYLHGM 165
VF + VM M+ D ++ + SE+ I + Y++LKGL+Y+H
Sbjct: 108 DVFTPASSLRNFYDFYLVMPFMQT----DLQKIMGMEFSEEKIQYLVYQMLKGLKYIHSA 163
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
++H D+KP NL +N E+KI DFG++R + + T
Sbjct: 164 GVVHRDLKPGNLAVNEDCELKILDFGLARHAD-----------------AEMTGYVVTRW 206
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAIC---- 281
Y +PE + S W Y D+WS+G ++ E L G G + D + I +
Sbjct: 207 YRAPEVILS--W-MHYNQTVDIWSVGCIMAEMLTGKTLFKG-KDYLDQLTQILKVTGVPG 262
Query: 282 --FGERLE----------MPET-----------ASPEFRRFVRSCLEKDWRKRGTVEELL 318
F ++L +P+T ASP+ + LE D KR T + L
Sbjct: 263 TEFVQKLNDKAAKSYIQSLPQTPRKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQAL 322
Query: 319 AYPF 322
+PF
Sbjct: 323 THPF 326
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG ++++ EE G+ I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--------GKVPIK 186
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 187 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 229
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + +R C D R EL+
Sbjct: 230 ISSILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELI 272
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 75/288 (26%), Positives = 124/288 (43%), Gaps = 41/288 (14%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS-QFIVKCHA 112
VLG G G V ++ ++++ +ALK L +A E E+ R IV+
Sbjct: 69 VLGLGINGKVLQIFNKRTQEKFALKXLQDCP------KARREVELHWRASQCPHIVRIVD 122
Query: 113 VFYTI-EGEICF--VMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYLHGMQI 167
V+ + G C V E ++ G LF ++ R + +E S + + + +QYLH + I
Sbjct: 123 VYENLYAGRKCLLIVXECLDGGELFSRIQDRGDQAFTEREASEIXKSIGEAIQYLHSINI 182
Query: 168 IHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTC 224
H D+KP NLL K +K+ DFG ++ ET C T
Sbjct: 183 AHRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSH-----------NSLTTPCY-TP 227
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDLMALICAIC 281
Y++PE + E+ Y + D WSLGV+ L G+ P G P I
Sbjct: 228 YYVAPEVLGPEK----YDKSCDXWSLGVIXYILLCGYPPFYSNHGLAISPGXKTRIRXGQ 283
Query: 282 FGERLEMPETA--SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
+ PE + S E + +R+ L+ + +R T+ E +P++ + +
Sbjct: 284 Y--EFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIXQST 329
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 119/277 (42%), Gaps = 33/277 (11%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
DL L LG G G+V ++ K Y + + ++ + EA+++ L + +
Sbjct: 25 DLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 81
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLR-VRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
V+ + V T + I + E+M G L + LR +R + + + V + ++YL Q
Sbjct: 82 VQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIV---EETRXXXXXXXXXXXXIGEAAIACMGT 223
+H D+ N L+N +G VK++DFG+SR V EET +++
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEET----------------SSVGSKFP 184
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICF 282
+ PE + + + D+W+ GV++ E +G P F I
Sbjct: 185 VRWSPPEVLMYSK----FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE----HIAQ 236
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
G RL P AS + + SC + +R T + LL+
Sbjct: 237 GLRLYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 30/222 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V + HQ + A+K S R + E +I+K+L+ +V V
Sbjct: 22 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 81
Query: 115 YTIEGEI-----CFVMEHMERGSLFDSLRVRKK---LSEDVISGVAYRVLKGLQYLHGMQ 166
++ ME+ E G L L + L E I + + L+YLH +
Sbjct: 82 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 141
Query: 167 IIHGDIKPSNLLINGKGEV---KIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+++ + KI D G ++ +++ GE +GT
Sbjct: 142 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ---------------GELCTEFVGT 186
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI 265
Y++PE ++ ++ Y D WS G + EC+ G P +
Sbjct: 187 LQYLAPELLEQKK----YTVTVDYWSFGTLAFECITGFRPFL 224
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 94/222 (42%), Gaps = 30/222 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G G V + HQ + A+K S R + E +I+K+L+ +V V
Sbjct: 23 LGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVP 82
Query: 115 YTIEGEI-----CFVMEHMERGSLFDSLRVRKK---LSEDVISGVAYRVLKGLQYLHGMQ 166
++ ME+ E G L L + L E I + + L+YLH +
Sbjct: 83 DGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLSDISSALRYLHENR 142
Query: 167 IIHGDIKPSNLLINGKGEV---KIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KP N+++ + KI D G ++ +++ GE +GT
Sbjct: 143 IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQ---------------GELCTEFVGT 187
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI 265
Y++PE ++ ++ Y D WS G + EC+ G P +
Sbjct: 188 LQYLAPELLEQKK----YTVTVDYWSFGTLAFECITGFRPFL 225
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 32/287 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK++ LG G+ G V Y + A+K L S E EIL+ L
Sbjct: 23 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 82
Query: 105 QFIVKCHAVFYTIEGE-ICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYL 162
+ IVK + G I +ME + GSL + L + + K++ A ++ KG+ YL
Sbjct: 83 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 142
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
Q +H D+ N+L+ + +VKI DFG+++ +E + + A C+
Sbjct: 143 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYPLIGFGE-------KP 271
+ A DVWS GV + E C P+ F + +
Sbjct: 203 QSKFY---------------IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM 247
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ L+ + G+RL P E + +R C E R + + L+
Sbjct: 248 TVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 294
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 117/287 (40%), Gaps = 32/287 (11%)
Query: 49 LKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
LK++ LG G+ G V Y + A+K L S E EIL+ L
Sbjct: 11 LKRIRDLGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYH 70
Query: 105 QFIVKCHAVFYTIEGE-ICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYL 162
+ IVK + G I +ME + GSL + L + + K++ A ++ KG+ YL
Sbjct: 71 ENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYL 130
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
Q +H D+ N+L+ + +VKI DFG+++ +E + + A C+
Sbjct: 131 GSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE----CLVGHYPLIGFGE-------KP 271
+ A DVWS GV + E C P+ F + +
Sbjct: 191 QSKFY---------------IASDVWSFGVTLHELLTYCDSDSSPMALFLKMIGPTHGQM 235
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ L+ + G+RL P E + +R C E R + + L+
Sbjct: 236 TVTRLVNTLKEGKRLPCPPNCPDEVYQLMRKCWEFQPSNRTSFQNLI 282
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/269 (22%), Positives = 118/269 (43%), Gaps = 19/269 (7%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
T +G G+ G VYK + ++ LKV++ T +E +L++ I+
Sbjct: 42 TRIGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQF--QAFRNEVAVLRKTRHVNILLFMG 99
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
Y + + V + E SL+ L V++ K + +A + +G+ YLH IIH D
Sbjct: 100 --YMTKDNLAIVTQWCEGSSLYKHLHVQETKFQMFQLIDIARQTAQGMDYLHAKNIIHRD 157
Query: 172 IKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPER 231
+K +N+ ++ VKI DFG++ + ++R + G+ +M+PE
Sbjct: 158 MKSNNIFLHEGLTVKIGDFGLATV--KSRWSG----------SQQVEQPTGSVLWMAPEV 205
Query: 232 VDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPET 291
+ + + F DV+S G+V+ E + G P + ++ ++ L
Sbjct: 206 IRMQD-NNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASPDLSKLYK 264
Query: 292 ASPE-FRRFVRSCLEKDWRKRGTVEELLA 319
P+ +R V C++K +R ++L+
Sbjct: 265 NCPKAMKRLVADCVKKVKEERPLFPQILS 293
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 27/274 (9%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
DL L LG G G+V ++ K Y + + ++ + EA+++ L + +
Sbjct: 9 DLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 65
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLR-VRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
V+ + V T + I + E+M G L + LR +R + + + V + ++YL Q
Sbjct: 66 VQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 124
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
+H D+ N L+N +G VK++DFG+SR V + +++ +
Sbjct: 125 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------------SSVGSKFPVRW 171
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGER 285
PE + + + D+W+ GV++ E +G P F I G R
Sbjct: 172 SPPEVLMYSK----FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE----HIAQGLR 223
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
L P AS + + SC + +R T + LL+
Sbjct: 224 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 257
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
N+ +LK L +G G G V + + N + A+K + ++ EA ++ +L
Sbjct: 4 NMKELKLLQTIGKGEFGDVM-LGDYRGNKV-AVKCIKNDATA---QAFLAEASVMTQLRH 58
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK--LSEDVISGVAYRVLKGLQYL 162
+V+ V +G + V E+M +GSL D LR R + L D + + V + ++YL
Sbjct: 59 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 118
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
G +H D+ N+L++ K++DFG+++ T+ G+ +
Sbjct: 119 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----------DTGKLPV---- 163
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMALIC 278
+ +PE + ++ + DVWS G+++ E + FG P L ++
Sbjct: 164 --KWTAPEALREKK----FSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKDVVP 210
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ G +++ P+ P +++C D R + +L
Sbjct: 211 RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 249
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/305 (24%), Positives = 133/305 (43%), Gaps = 35/305 (11%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA 93
P+ N ++E +D+ LG G G VY+ +K + A+K L T+ +
Sbjct: 2 PSPNYDKWEMER-TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFL 58
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGV 151
EA ++K + +V+ V T E ++E M G+L D LR R++++ V+ +
Sbjct: 59 KEAAVMKEIKHPNLVQLLGVC-TREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYM 117
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
A ++ ++YL IH D+ N L+ VK+ADFG+SR++
Sbjct: 118 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--------------- 162
Query: 212 XIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGF 267
G+ A G + +PE + + + DVW+ GV++ E G P G
Sbjct: 163 -TGDTXTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI 217
Query: 268 GEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKR 326
DL + + R+E PE + +R+C + + R + E+ A+ + +
Sbjct: 218 ----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQE 273
Query: 327 SSSSN 331
SS S+
Sbjct: 274 SSISD 278
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFI 107
L+ L +G G G V + A+K L+ ++I + + E +LK L + +
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 108 VKCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ VF +IE E+ V M G+ +++ + LS++ + + Y++L+GL+Y+
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKSQALSDEHVQFLVYQLLRGLKYI 147
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H IIH D+KPSN+ +N E++I DFG++R +E +
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----------------MTGYVA 190
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
T Y +PE + + W Y D+WS+G ++ E L G
Sbjct: 191 TRWYRAPEIMLN--W-MHYNQTVDIWSVGCIMAELLQG 225
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 44/303 (14%)
Query: 32 HFPTSNPTSPDVENIS-----------DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL 80
H+P P + +S D+ LG G G VY+ +K + A+K L
Sbjct: 194 HYPAPKRNKPTIYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 253
Query: 81 NTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV- 139
T+ + EA ++K + +V+ V T E + E M G+L D LR
Sbjct: 254 K--EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLREC 310
Query: 140 -RKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
R+++S V+ +A ++ ++YL IH ++ N L+ VK+ADFG+SR++
Sbjct: 311 NRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-- 368
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVL 255
G+ A G + +PE + + + DVW+ GV++
Sbjct: 369 --------------TGDTYTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLW 410
Query: 256 E-CLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTV 314
E G P G DL + + R+E PE + +R+C + + R +
Sbjct: 411 EIATYGMSPYPGI----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 466
Query: 315 EEL 317
E+
Sbjct: 467 AEI 469
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 34/285 (11%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSI--YALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
+G G+ G V K+ QK I A K+ + R + E EI+K LD I++
Sbjct: 32 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSLDHPNIIRL 88
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
+ F +I VME G LF+ + ++ E + + VL + Y H + + H
Sbjct: 89 YETFED-NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 147
Query: 171 DIKPSNLLI---NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
D+KP N L + +K+ DFG++ + G+ +GT Y+
Sbjct: 148 DLKPENFLFLTDSPDSPLKLIDFGLAARFKP---------------GKMMRTKVGTPYYV 192
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI--CAICFGER 285
SP+ ++ G YG D WS GV++ L G YP ++M I F E+
Sbjct: 193 SPQVLE-----GLYGPECDEWSAGVMMYVLLCG-YPPFSAPTDXEVMLKIREGTFTFPEK 246
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSS 330
+ SP+ +R L K ++R T + L + + K+ SSS
Sbjct: 247 DWL--NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 289
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 19 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 78
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 79 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 136
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG ++++ EE G+ I
Sbjct: 137 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--------GKVPIK 188
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 189 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 231
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 232 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 274
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 27/274 (9%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
DL L LG G G+V ++ K Y + + ++ + EA+++ L + +
Sbjct: 25 DLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 81
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLR-VRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
V+ + V T + I + E+M G L + LR +R + + + V + ++YL Q
Sbjct: 82 VQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 140
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
+H D+ N L+N +G VK++DFG+SR V + +++ +
Sbjct: 141 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------------SSVGSKFPVRW 187
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGER 285
PE + + + D+W+ GV++ E +G P F I G R
Sbjct: 188 SPPEVLMYSK----FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE----HIAQGLR 239
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
L P AS + + SC + +R T + LL+
Sbjct: 240 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 273
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 122/285 (42%), Gaps = 34/285 (11%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSI--YALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
+G G+ G V K+ QK I A K+ + R + E EI+K LD I++
Sbjct: 15 NTIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFK--QEIEIMKSLDHPNIIRL 71
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHG 170
+ F +I VME G LF+ + ++ E + + VL + Y H + + H
Sbjct: 72 YETFED-NTDIYLVMELCTGGELFERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVAHR 130
Query: 171 DIKPSNLLI---NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
D+KP N L + +K+ DFG++ + G+ +GT Y+
Sbjct: 131 DLKPENFLFLTDSPDSPLKLIDFGLAARFKP---------------GKMMRTKVGTPYYV 175
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALI--CAICFGER 285
SP+ ++ G YG D WS GV++ L G YP ++M I F E+
Sbjct: 176 SPQVLE-----GLYGPECDEWSAGVMMYVLLCG-YPPFSAPTDXEVMLKIREGTFTFPEK 229
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRSSSS 330
+ SP+ +R L K ++R T + L + + K+ SSS
Sbjct: 230 DWL--NVSPQAESLIRRLLTKSPKQRITSLQALEHEWFEKQLSSS 272
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 27/274 (9%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
DL L LG G G+V ++ K Y + + ++ + EA+++ L + +
Sbjct: 5 DLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 61
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLR-VRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
V+ + V T + I + E+M G L + LR +R + + + V + ++YL Q
Sbjct: 62 VQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 120
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
+H D+ N L+N +G VK++DFG+SR V + +++ +
Sbjct: 121 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------------SSVGSKFPVRW 167
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGER 285
PE + ++ D+W+ GV++ E +G P F I G R
Sbjct: 168 SPPEVLMYSKFSS----KSDIWAFGVLMWEIYSLGKMPYERFTNSETAE----HIAQGLR 219
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
L P AS + + SC + +R T + LL+
Sbjct: 220 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 253
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 125/281 (44%), Gaps = 32/281 (11%)
Query: 55 LGHGNGGIVYK-VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAV 113
+G G+ VYK + + + + ++ + + R + EAE LK L IV+ +
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 114 F-YTIEGEICFVM--EHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ--II 168
+ T++G+ C V+ E G+L L+ K V+ ++LKGLQ+LH II
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQILKGLQFLHTRTPPII 153
Query: 169 HGDIKPSNLLING-KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
H D+K N+ I G G VKI D G++ + A A +GT +
Sbjct: 154 HRDLKCDNIFITGPTGSVKIGDLGLATLKR----------------ASFAKAVIGTPEFX 197
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER-L 286
+PE + + Y + DV++ G LE YP + E + + + G +
Sbjct: 198 APEXYEEK-----YDESVDVYAFGXCXLEXATSEYP---YSECQNAAQIYRRVTSGVKPA 249
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
+ A PE + + C+ ++ +R ++++LL + F + +
Sbjct: 250 SFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLNHAFFQEET 290
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 70
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E ++E M G+L D LR R+++S V+ +A ++ ++YL
Sbjct: 71 LVQLLGVC-TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 173
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 174 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 225
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 27/274 (9%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
DL L LG G G+V ++ K Y + + ++ + EA+++ L + +
Sbjct: 10 DLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 66
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLR-VRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
V+ + V T + I + E+M G L + LR +R + + + V + ++YL Q
Sbjct: 67 VQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
+H D+ N L+N +G VK++DFG+SR V + +++ +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------------SSVGSKFPVRW 172
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGER 285
PE + + + D+W+ GV++ E +G P F I G R
Sbjct: 173 SPPEVLMYSK----FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE----HIAQGLR 224
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
L P AS + + SC + +R T + LL+
Sbjct: 225 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 258
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 122/279 (43%), Gaps = 39/279 (13%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
N+ +LK L +G G G V + + N + A+K + ++ EA ++ +L
Sbjct: 19 NMKELKLLQTIGKGEFGDVM-LGDYRGNKV-AVKCIKNDATA---QAFLAEASVMTQLRH 73
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK--LSEDVISGVAYRVLKGLQYL 162
+V+ V +G + V E+M +GSL D LR R + L D + + V + ++YL
Sbjct: 74 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 133
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
G +H D+ N+L++ K++DFG+++ T+ G+ +
Sbjct: 134 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----------DTGKLPV---- 178
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMALIC 278
+ +PE + ++ + DVWS G+++ E + FG P L ++
Sbjct: 179 --KWTAPEALREKK----FSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKDVVP 225
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ G +++ P+ P +++C D R + +L
Sbjct: 226 RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 264
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG ++++ EE G+ I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--------GKVPIK 186
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 187 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 229
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 230 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 117/274 (42%), Gaps = 27/274 (9%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
DL L LG G G+V ++ K Y + + ++ + EA+++ L + +
Sbjct: 16 DLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 72
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLR-VRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
V+ + V T + I + E+M G L + LR +R + + + V + ++YL Q
Sbjct: 73 VQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 131
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
+H D+ N L+N +G VK++DFG+SR V + +++ +
Sbjct: 132 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------------SSVGSKFPVRW 178
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGER 285
PE + + + D+W+ GV++ E +G P F I G R
Sbjct: 179 SPPEVLMYSK----FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE----HIAQGLR 230
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
L P AS + + SC + +R T + LL+
Sbjct: 231 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 264
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 127/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 70
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E ++E M G+L D LR R+++S V+ +A ++ ++YL
Sbjct: 71 LVQLLGVC-TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 173
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 174 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 225
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 56/242 (23%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
D K++ ++G G G V+K +H+ Y ++ + + +A E + L +LD I
Sbjct: 13 DFKEIELIGSGGFGQVFKAKHRIDGKTYVIRRVKYNN-----EKAEREVKALAKLDHVNI 67
Query: 108 VKCHAVF------------------YTIEGE----------ICFVMEHMERGSLFDSLRV 139
V + + Y E + ME ++G+L +
Sbjct: 68 VHYNGCWDGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEK 127
Query: 140 RK--KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFG-VSRIV 196
R+ KL + + + ++ KG+ Y+H ++IH D+KPSN+ + +VKI DFG V+ +
Sbjct: 128 RRGEKLDKVLALELFEQITKGVDYIHSKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLK 187
Query: 197 EETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE 256
+ + GT YMSPE++ S+ DYG D+++LG+++ E
Sbjct: 188 NDGKR----------------TRSKGTLRYMSPEQISSQ----DYGKEVDLYALGLILAE 227
Query: 257 CL 258
L
Sbjct: 228 LL 229
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 41/279 (14%)
Query: 54 VLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
++G G+ G V +V Q+ + A+K L + R EA I+ + D I++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPV-AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 110 CHAVFYTIEGEICF-VMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQI 167
V G + V E+ME GSL LR + + + G+ V G++YL +
Sbjct: 115 LEGV--VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG---TC 224
+H D+ N+L++ K++DFG+SR++E+ +AA G
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD--------------PDAAXTTTGGKIPI 218
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA----LICAI 280
+ +PE + + A DVWS GVV+ E L +GE+P +I ++
Sbjct: 219 RWTAPEAIAFR----TFSSASDVWSFGVVMWEVL-------AYGERPYWNMTNRDVISSV 267
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
G RL P + + C KD +R ++++
Sbjct: 268 EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 119/279 (42%), Gaps = 41/279 (14%)
Query: 54 VLGHGNGGIV----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
++G G+ G V +V Q+ + A+K L + R EA I+ + D I++
Sbjct: 56 IIGSGDSGEVCYGRLRVPGQRDVPV-AIKALKAGYTERQRRDFLSEASIMGQFDHPNIIR 114
Query: 110 CHAVFYTIEGEICF-VMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQI 167
V G + V E+ME GSL LR + + + G+ V G++YL +
Sbjct: 115 LEGV--VTRGRLAMIVTEYMENGSLDTFLRTHDGQFTIMQLVGMLRGVGAGMRYLSDLGY 172
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG---TC 224
+H D+ N+L++ K++DFG+SR++E+ +AA G
Sbjct: 173 VHRDLAARNVLVDSNLVCKVSDFGLSRVLEDD--------------PDAAYTTTGGKIPI 218
Query: 225 AYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMA----LICAI 280
+ +PE + + A DVWS GVV+ E L +GE+P +I ++
Sbjct: 219 RWTAPEAIAFR----TFSSASDVWSFGVVMWEVL-------AYGERPYWNMTNRDVISSV 267
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
G RL P + + C KD +R ++++
Sbjct: 268 EEGYRLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVS 306
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 70
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R+++S V+ +A ++ ++YL
Sbjct: 71 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 173
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 174 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 225
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 122/289 (42%), Gaps = 53/289 (18%)
Query: 54 VLGHGNGGIVYKVR--HQKSNSIY---ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LG G G V K H K + Y A+K+L +S E +LK+++ ++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE----------------------- 145
K + + +G + ++E+ + GSL LR +K+
Sbjct: 90 KLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 146 --DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXX 203
D+IS A+++ +G+QYL M+++H D+ N+L+ ++KI+DFG+SR V E
Sbjct: 149 MGDLIS-FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 204 XXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHY 262
G + M + Y DVWS GV++ E + +G
Sbjct: 208 KRSQ------GRIPVKWMAIESLFD----------HIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 263 PLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
P G + L + G R+E P+ S E R + C +++ KR
Sbjct: 252 PYPGIPPE----RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 44/303 (14%)
Query: 32 HFPTSNPTSPDVENIS-----------DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL 80
H+P P V +S D+ LG G G VY+ +K + A+K L
Sbjct: 233 HYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 292
Query: 81 NTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV- 139
T+ + EA ++K + +V+ V T E + E M G+L D LR
Sbjct: 293 K--EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLREC 349
Query: 140 -RKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
R++++ V+ +A ++ ++YL IH ++ N L+ VK+ADFG+SR++
Sbjct: 350 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-- 407
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVL 255
G+ A G + +PE + + + DVW+ GV++
Sbjct: 408 --------------TGDTYTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLW 449
Query: 256 E-CLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTV 314
E G P G DL + + R+E PE + +R+C + + R +
Sbjct: 450 EIATYGMSPYPGI----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 505
Query: 315 EEL 317
E+
Sbjct: 506 AEI 508
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 98/221 (44%), Gaps = 20/221 (9%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAHEAEILKRLDSQFIVKCHA 112
++G G+ G VY + +N A+K +N +I + E IL RL S +I++ H
Sbjct: 35 LIGRGSYGYVYLAYDKNANKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLHD 94
Query: 113 VFYTIE----GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ + E+ V+E + L + L+E + + Y +L G +++H II
Sbjct: 95 LIIPEDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEQHVKTILYNLLLGEKFIHESGII 153
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXX-----------XXXIGEAA 217
H D+KP+N L+N VKI DFG++R + + + +
Sbjct: 154 HRDLKPANCLLNQDCSVKICDFGLARTINSDKDIHIVNDLEEKEENEEPGPHNKNLKKQL 213
Query: 218 IACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+ + T Y +PE + + +Y + D+WS G + E L
Sbjct: 214 TSHVVTRWYRAPELILLQE---NYTNSIDIWSTGCIFAELL 251
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/289 (24%), Positives = 121/289 (41%), Gaps = 53/289 (18%)
Query: 54 VLGHGNGGIVYKVR--HQKSNSIY---ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LG G G V K H K + Y A+K+L +S E +LK+++ ++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE----------------------- 145
K + + +G + ++E+ + GSL LR +K+
Sbjct: 90 KLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 146 --DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXX 203
D+IS A+++ +G+QYL M+++H D+ N+L+ ++KI+DFG+SR V E
Sbjct: 149 MGDLIS-FAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYV 207
Query: 204 XXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHY 262
G + M + Y DVWS GV++ E + +G
Sbjct: 208 KRSQ------GRIPVKWMAIESLFD----------HIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 263 PLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
P G + L + G R+E P+ S E R + C +++ KR
Sbjct: 252 PYPGIPPE----RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 70
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R+++S V+ +A ++ ++YL
Sbjct: 71 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 129
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 173
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 174 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 225
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 277
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGXLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 184
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 185 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 227
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 184
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 185 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 227
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 72/303 (23%), Positives = 124/303 (40%), Gaps = 44/303 (14%)
Query: 32 HFPTSNPTSPDVENIS-----------DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL 80
H+P P V +S D+ LG G G VY+ +K + A+K L
Sbjct: 191 HYPAPKRNKPTVYGVSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTL 250
Query: 81 NTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV- 139
T+ + EA ++K + +V+ V T E + E M G+L D LR
Sbjct: 251 K--EDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLREC 307
Query: 140 -RKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
R++++ V+ +A ++ ++YL IH ++ N L+ VK+ADFG+SR++
Sbjct: 308 NRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLM-- 365
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVL 255
G+ A G + +PE + + + DVW+ GV++
Sbjct: 366 --------------TGDTYTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLW 407
Query: 256 E-CLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTV 314
E G P G DL + + R+E PE + +R+C + + R +
Sbjct: 408 EIATYGMSPYPGI----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSF 463
Query: 315 EEL 317
E+
Sbjct: 464 AEI 466
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 17 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 76
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 77 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 134
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 135 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 186
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 187 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 229
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 230 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 272
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 21 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 80
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 81 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 138
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 139 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 190
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 191 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 233
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 234 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 276
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VL G G VYK +K A+K L +S + EA ++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + +M+ M G L D +R K + + ++ KG+ Y
Sbjct: 82 DNPHV--CRLLGICLTSTVQLIMQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 191
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 192 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 234
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 235 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 78 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 187
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 188 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 230
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 231 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 40 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 99
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 100 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 157
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 158 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 209
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 210 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 252
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 253 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 295
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 124/290 (42%), Gaps = 34/290 (11%)
Query: 34 PTSNPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA 93
P+ N ++E +D+ LG G G VY+ +K + A+K L T+ +
Sbjct: 5 PSPNYDKWEMER-TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFL 61
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGV 151
EA ++K + +V+ V T E + E M G+L D LR R++++ V+ +
Sbjct: 62 KEAAVMKEIKHPNLVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYM 120
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
A ++ ++YL IH D+ N L+ VK+ADFG+SR++
Sbjct: 121 ATQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLM--------------- 165
Query: 212 XIGEAAIACMGT---CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGF 267
G+ A G + +PE + + + DVW+ GV++ E G P G
Sbjct: 166 -TGDTYTAHAGAKFPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI 220
Query: 268 GEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
DL + + R+E PE + +R+C + + R + E+
Sbjct: 221 ----DLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFI 107
L+ L +G G G V + A+K L+ ++I + + E +LK L + +
Sbjct: 30 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 89
Query: 108 VKCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ VF +IE E+ V M G+ +++ + LS++ + + Y++L+GL+Y+
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 147
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H IIH D+KPSN+ +N E++I DFG++R +E +
Sbjct: 148 HSAGIIHRDLKPSNVAVNEDSELRILDFGLARQADEE-----------------MTGYVA 190
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
T Y +PE + + W Y D+WS+G ++ E L G
Sbjct: 191 TRWYRAPEIMLN--W-MHYNQTVDIWSVGCIMAELLQG 225
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 9 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 68
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 69 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 126
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 127 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 178
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 179 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 221
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 222 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 264
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 82 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 191
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 192 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 234
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 235 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 18 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 77
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 78 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 135
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 136 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 187
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 188 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 230
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 231 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 273
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 115/284 (40%), Gaps = 49/284 (17%)
Query: 55 LGHGNGGIV-----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G G V Y + ++ + A+K L S R EAE+L L + IVK
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNA-RKDFHREAELLTNLQHEHIVK 79
Query: 110 CHAVFYTIEGE-ICFVMEHMERGSLFDSLRVR-------------KKLSEDVISGVAYRV 155
+ V +EG+ + V E+M+ G L LR +L++ + +A ++
Sbjct: 80 FYGV--CVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQI 137
Query: 156 LKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGE 215
G+ YL +H D+ N L+ VKI DFG+SR V T
Sbjct: 138 AAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY------------R 185
Query: 216 AAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM- 274
M +M PE + ++ + DVWSLGVV+ E + +G++P
Sbjct: 186 VGGHTMLPIRWMPPESIMYRKFTTE----SDVWSLGVVLWE-------IFTYGKQPWYQL 234
Query: 275 ---ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVE 315
+I I G L+ P T E + C +++ R ++
Sbjct: 235 SNNEVIECITQGRVLQRPRTCPQEVYELMLGCWQREPHMRKNIK 278
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 121/289 (41%), Gaps = 53/289 (18%)
Query: 54 VLGHGNGGIVYKVR--HQKSNSIY---ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
LG G G V K H K + Y A+K+L +S E +LK+++ ++
Sbjct: 30 TLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE----------------------- 145
K + + +G + ++E+ + GSL LR +K+
Sbjct: 90 KLYGAC-SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALT 148
Query: 146 --DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXX 203
D+IS A+++ +G+QYL M ++H D+ N+L+ ++KI+DFG+SR V E
Sbjct: 149 MGDLIS-FAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSXV 207
Query: 204 XXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHY 262
G + M + Y DVWS GV++ E + +G
Sbjct: 208 KRSQ------GRIPVKWMAIESLFD----------HIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 263 PLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
P G + L + G R+E P+ S E R + C +++ KR
Sbjct: 252 PYPGIPPE----RLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKR 296
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 72
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R++++ V+ +A ++ ++YL
Sbjct: 73 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAPAGAK 175
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 176 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 227
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 228 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 135/309 (43%), Gaps = 43/309 (13%)
Query: 31 HHFPTSNPTSPDVENISDLKKLTV---LGHGNGGIVYK-----VRHQKSNSIYALKVLNT 82
+F ++ PD ++ +K+T+ LG G+ G+VY+ V + + A+K +N
Sbjct: 29 EYFSAADVYVPDEWEVAR-EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 87
Query: 83 TSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLR-VR 140
+S R + +EA ++K + +V+ V +G+ V ME M RG L LR +R
Sbjct: 88 AASMRERIEFLNEASVMKEFNCHHVVRLLGV--VSQGQPTLVIMELMTRGDLKSYLRSLR 145
Query: 141 KKLSEDVISG---------VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFG 191
++ + + +A + G+ YL+ + +H D+ N ++ VKI DFG
Sbjct: 146 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 205
Query: 192 VSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLG 251
++R + ET G+ + +MSPE + G + DVWS G
Sbjct: 206 MTRDIYETDYYRKG--------GKGLLP----VRWMSPESLKD----GVFTTYSDVWSFG 249
Query: 252 VVVLE-CLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRK 310
VV+ E + P G + ++ + G L+ P+ +R C + + +
Sbjct: 250 VVLWEIATLAEQPYQGLSNE----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKM 305
Query: 311 RGTVEELLA 319
R + E+++
Sbjct: 306 RPSFLEIIS 314
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 14 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 71
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R++++ V+ +A ++ ++YL
Sbjct: 72 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 130
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 131 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAPAGAK 174
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 175 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 226
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 227 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 278
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 135/309 (43%), Gaps = 43/309 (13%)
Query: 31 HHFPTSNPTSPDVENISDLKKLTV---LGHGNGGIVYK-----VRHQKSNSIYALKVLNT 82
+F ++ PD ++ +K+T+ LG G+ G+VY+ V + + A+K +N
Sbjct: 7 EYFSAADVYVPDEWEVAR-EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 83 TSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLR-VR 140
+S R + +EA ++K + +V+ V +G+ V ME M RG L LR +R
Sbjct: 66 AASMRERIEFLNEASVMKEFNCHHVVRLLGV--VSQGQPTLVIMELMTRGDLKSYLRSLR 123
Query: 141 KKLSEDVISG---------VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFG 191
++ + + +A + G+ YL+ + +H D+ N ++ VKI DFG
Sbjct: 124 PAMANNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 183
Query: 192 VSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLG 251
++R + ET G+ + +MSPE + G + DVWS G
Sbjct: 184 MTRDIYETDYYRKG--------GKGLLP----VRWMSPESLKD----GVFTTYSDVWSFG 227
Query: 252 VVVLE-CLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRK 310
VV+ E + P G + ++ + G L+ P+ +R C + + +
Sbjct: 228 VVLWEIATLAEQPYQGLSNE----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKM 283
Query: 311 RGTVEELLA 319
R + E+++
Sbjct: 284 RPSFLEIIS 292
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/281 (23%), Positives = 123/281 (43%), Gaps = 37/281 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 18 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 77
Query: 110 CHAVFYTIEGEICFVMEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKGL 159
V + + +ME M RG L LR +R ++ + + +A + G+
Sbjct: 78 LLGVVSQGQPTLV-IMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
YL+ + +H D+ N ++ VKI DFG++R + ET G+ +
Sbjct: 137 AYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG--------GKGLLP 188
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALIC 278
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 189 ----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVLR 236
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 237 FVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 277
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 112/263 (42%), Gaps = 17/263 (6%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEILKRLDS-QFIVKCHA 112
LG G GIV+K +++ + A+K + + ++ + E IL L + IV
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 113 VFYTI-EGEICFVMEHMERGSLFDSLRVRKKLSEDVISG-VAYRVLKGLQYLHGMQIIHG 170
V + ++ V ++ME +R + E V V Y+++K ++YLH ++H
Sbjct: 77 VLRADNDRDVYLVFDYMETDL---HAVIRANILEPVHKQYVVYQLIKVIKYLHSGGLLHR 133
Query: 171 DIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA-------AIACMGT 223
D+KPSN+L+N + VK+ADFG+SR R E + T
Sbjct: 134 DMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPILTDYVAT 193
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFG 283
Y +PE + Y D+WSLG ++ E L G G L +I I F
Sbjct: 194 RWYRAPEILLG---STKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFP 250
Query: 284 ERLEMPETASPEFRRFVRSCLEK 306
++ SP + + S EK
Sbjct: 251 SNEDVESIQSPFAKTMIESLKEK 273
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 95/213 (44%), Gaps = 18/213 (8%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
+ +G+G G+V R + + A+K + N + E +ILK I+
Sbjct: 60 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 119
Query: 111 HAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+ E + +V+ + L + + L+ + + Y++L+GL+Y+H Q
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 179
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
+IH D+KPSNLL+N E+KI DFG++R + + + T Y
Sbjct: 180 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY----------VATRWY 229
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECLV 259
+PE + S +Y A D+WS+G + E L
Sbjct: 230 RAPELMLSLH---EYTQAIDLWSVGCIFGEMLA 259
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 72/309 (23%), Positives = 135/309 (43%), Gaps = 43/309 (13%)
Query: 31 HHFPTSNPTSPDVENISDLKKLTV---LGHGNGGIVYK-----VRHQKSNSIYALKVLNT 82
+F ++ PD ++ +K+T+ LG G+ G+VY+ V + + A+K +N
Sbjct: 7 EYFSAADVYVPDEWEVAR-EKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNE 65
Query: 83 TSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLR-VR 140
+S R + +EA ++K + +V+ V +G+ V ME M RG L LR +R
Sbjct: 66 AASMRERIEFLNEASVMKEFNCHHVVRLLGV--VSQGQPTLVIMELMTRGDLKSYLRSLR 123
Query: 141 KKLSEDVISG---------VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFG 191
++ + + +A + G+ YL+ + +H D+ N ++ VKI DFG
Sbjct: 124 PEMENNPVLAPPSLSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFG 183
Query: 192 VSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLG 251
++R + ET G+ + +MSPE + G + DVWS G
Sbjct: 184 MTRDIYETDYYRKG--------GKGLLP----VRWMSPESLKD----GVFTTYSDVWSFG 227
Query: 252 VVVLE-CLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRK 310
VV+ E + P G + ++ + G L+ P+ +R C + + +
Sbjct: 228 VVLWEIATLAEQPYQGLSNE----QVLRFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKM 283
Query: 311 RGTVEELLA 319
R + E+++
Sbjct: 284 RPSFLEIIS 292
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 95/212 (44%), Gaps = 18/212 (8%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
+ +G+G G+V R + + A+K + N + E +ILK I+
Sbjct: 59 IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAI 118
Query: 111 HAVFYTI----EGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+ E + +V+ + L + + L+ + + Y++L+GL+Y+H Q
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQPLTLEHVRYFLYQLLRGLKYMHSAQ 178
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
+IH D+KPSNLL+N E+KI DFG++R + + + T Y
Sbjct: 179 VIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY----------VATRWY 228
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+PE + S +Y A D+WS+G + E L
Sbjct: 229 RAPELMLSLH---EYTQAIDLWSVGCIFGEML 257
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 36/297 (12%)
Query: 41 PDVENISDLKKLT--VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI 98
P ++D +L+ VLG G G V + H+++ ALK+L S R + H +
Sbjct: 2 PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL--YDSPKARQEVDHHWQA 59
Query: 99 LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVL 156
I+ + + + + +ME ME G LF ++ R + +E + + +
Sbjct: 60 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 119
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXI 213
+Q+LH I H D+KP NLL K + +K+ DFG ++ E T+
Sbjct: 120 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQ------------- 164
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL---IGFGEK 270
A T Y++PE + E+ Y + D+WSLGV++ L G P G
Sbjct: 165 -NALQTPCYTPYYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS 219
Query: 271 PDLMALICAICFGERLEMPETA--SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
P + I +G PE + S + ++ +R L+ D +R T+ + + +P++ +
Sbjct: 220 PGMKRRIRLGQYG--FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 274
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 131/297 (44%), Gaps = 36/297 (12%)
Query: 41 PDVENISDLKKLT--VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI 98
P ++D +L+ VLG G G V + H+++ ALK+L S R + H +
Sbjct: 21 PKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLL--YDSPKARQEVDHHWQA 78
Query: 99 LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVL 156
I+ + + + + +ME ME G LF ++ R + +E + + +
Sbjct: 79 SGGPHIVCILDVYENMHHGKRCLLIIMECMEGGELFSRIQERGDQAFTEREAAEIMRDIG 138
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGE---VKIADFGVSRIVEETRXXXXXXXXXXXXI 213
+Q+LH I H D+KP NLL K + +K+ DFG ++ E T+
Sbjct: 139 TAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAK--ETTQ------------- 183
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPL---IGFGEK 270
A T Y++PE + E+ Y + D+WSLGV++ L G P G
Sbjct: 184 -NALQTPCYTPYYVAPEVLGPEK----YDKSCDMWSLGVIMYILLCGFPPFYSNTGQAIS 238
Query: 271 PDLMALICAICFGERLEMPETA--SPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
P + I +G PE + S + ++ +R L+ D +R T+ + + +P++ +
Sbjct: 239 PGMKRRIRLGQYG--FPNPEWSEVSEDAKQLIRLLLKTDPTERLTITQFMNHPWINQ 293
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/218 (27%), Positives = 104/218 (47%), Gaps = 28/218 (12%)
Query: 49 LKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFI 107
L+ L +G G G V + A+K L+ ++I + + E +LK L + +
Sbjct: 22 LQGLRPVGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENV 81
Query: 108 VKCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ VF +IE E+ V M G+ +++ + LS++ + + Y++L+GL+Y+
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLM--GADLNNIVKCQALSDEHVQFLVYQLLRGLKYI 139
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H IIH D+KPSN+ +N E++I DFG++R +E +
Sbjct: 140 HSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADEE-----------------MTGYVA 182
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
T Y +PE + + W Y D+WS+G ++ E L G
Sbjct: 183 TRWYRAPEIMLN--W-MHYNQTVDIWSVGCIMAELLQG 217
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 72
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R++++ V+ +A ++ ++YL
Sbjct: 73 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 175
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 176 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 227
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 228 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/282 (24%), Positives = 124/282 (43%), Gaps = 39/282 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 110 CHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKG 158
V +G+ V ME M RG L LR +R ++ + + +A + G
Sbjct: 87 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ YL+ + +H D+ N ++ VKI DFG++R + ET G+ +
Sbjct: 145 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKG--------GKGLL 196
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALI 277
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 197 P----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVL 244
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 97/227 (42%), Gaps = 13/227 (5%)
Query: 44 ENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLD 103
E++ L++ VLG G V + ++ YA+K++ I R + E E+L +
Sbjct: 11 EDVYQLQE-DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI-RSRVFREVEMLYQCQ 68
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
V F+ E V E M GS+ + R+ +E S V V L +LH
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128
Query: 164 GMQIIHGDIKPSNLLI---NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
I H D+KP N+L N VKI DFG+ ++ E C
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIK------LNGDCSPISTPELLTPC 182
Query: 221 MGTCAYMSPERVDS-ERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
G+ YM+PE V++ Y D+WSLGV++ L G+ P +G
Sbjct: 183 -GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/279 (22%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS 104
N+ +LK L +G G G V + + N + A+K + ++ EA ++ +L
Sbjct: 10 NMKELKLLQTIGKGEFGDVM-LGDYRGNKV-AVKCIKNDATA---QAFLAEASVMTQLRH 64
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKK--LSEDVISGVAYRVLKGLQYL 162
+V+ V +G + V E+M +GSL D LR R + L D + + V + ++YL
Sbjct: 65 SNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYL 124
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
G +H D+ N+L++ K++DFG+++ T+ G+ +
Sbjct: 125 EGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQ-----------DTGKLPV---- 169
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMALIC 278
+ +PE + + DVWS G+++ E + FG P L ++
Sbjct: 170 --KWTAPEALRE----AAFSTKSDVWSFGILLWE-------IYSFGRVPYPRIPLKDVVP 216
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ G +++ P+ P +++C D R + +L
Sbjct: 217 RVEKGYKMDAPDGCPPAVYEVMKNCWHLDAAMRPSFLQL 255
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 118/292 (40%), Gaps = 70/292 (23%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSST---IIRHQAAHEAEILKRLDSQFIVKC 110
VLG G G V ++ ++++ +ALK+L + H A + + R IV
Sbjct: 25 VLGLGINGKVLQIFNKRTQEKFALKMLQDCPKARREVELHWRASQCPHIVR-----IVDV 79
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ Y + VME ++ G LF ++ R + +E S + + + +QYLH + I
Sbjct: 80 YENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIA 139
Query: 169 HGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+KP NLL K +K+ DFG ++
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK------------------------------- 168
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLI---GFGEKPDLMALICAICF 282
E G Y + D+WSLGV++ L G+ P G P + I
Sbjct: 169 ---------ETTGEKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAISPGMKTRI----- 214
Query: 283 GERLEMPETASPEF-------RRFVRSCLEKDWRKRGTVEELLAYPFVTKRS 327
R+ E +PE+ + +R+ L+ + +R T+ E + +P++ + +
Sbjct: 215 --RMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWIMQST 264
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 108/233 (46%), Gaps = 35/233 (15%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMER-GSLFDSLRVRKKLSEDVISGV 151
E +LK++ S F +++ F + ++E ME LFD + R L E++
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDS-FVLILERMEPVQDLFDFITERGALQEELARSF 119
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 120 FWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT----------- 168
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 169 -----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----E 215
Query: 271 PDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 216 HDEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/254 (24%), Positives = 118/254 (46%), Gaps = 38/254 (14%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAV 113
V+G+G+ G+V++ + +S+ + KVL + E +I++ + +V A
Sbjct: 47 VIGNGSFGVVFQAKLVESDEVAIKKVLQD------KRFKNRELQIMRIVKHPNVVDLKAF 100
Query: 114 FYT-----IEGEICFVMEHMERGSLFDSLRVRKKLSED----VISGVAYRVLKGLQYLHG 164
FY+ E + V+E++ +++ + R KL + +I Y++L+ L Y+H
Sbjct: 101 FYSNGDKKDEVFLNLVLEYVPE-TVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYIHS 159
Query: 165 MQIIHGDIKPSNLLINGK-GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
+ I H DIKP NLL++ G +K+ DFG ++I+ GE ++ + +
Sbjct: 160 IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKIL---------------IAGEPNVSXICS 204
Query: 224 CAYMSPERVDSERWGG-DYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF 282
Y +PE + +G +Y D+WS G V+ E + G PL D + I +
Sbjct: 205 RYYRAPELI----FGATNYTTNIDIWSTGCVMAELMQGQ-PLFPGESGIDQLVEIIKVLG 259
Query: 283 GERLEMPETASPEF 296
E +T +P +
Sbjct: 260 TPSREQIKTMNPNY 273
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 15 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 72
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R++++ V+ +A ++ ++YL
Sbjct: 73 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 131
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 132 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 175
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 176 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 227
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 228 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 279
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/292 (24%), Positives = 126/292 (43%), Gaps = 34/292 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 26 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 83
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R++++ V+ +A ++ ++YL
Sbjct: 84 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 142
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 143 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 186
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 187 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 238
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 239 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 290
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 128/294 (43%), Gaps = 38/294 (12%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 68
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E ++E M G+L D LR R+++S V+ +A ++ ++YL
Sbjct: 69 LVQLLGVC-TREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTXTAHAGAK 171
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFGEKPDLMALIC 278
+ +PE + + + DVW+ GV++ E + YP I + +L+
Sbjct: 172 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-- 225
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 226 ----DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/275 (24%), Positives = 115/275 (41%), Gaps = 29/275 (10%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQ---KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
+IS +K V+G G G V + K A+K L + + R EA I+ +
Sbjct: 5 DISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQ 64
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
D ++ V T + + E ME GSL LR + + + G+ + G++
Sbjct: 65 FDHPNVIHLEGVV-TKSTPVMIITEFMENGSLDSFLRQNDGQFTVIQLVGMLRGIAAGMK 123
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL M +H + N+L+N K++DFG+SR +E+ +A+
Sbjct: 124 YLADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYT---------SALGG 174
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP--DL--MAL 276
+ +PE + + + A DVWS G+V+ E ++ +GE+P D+ +
Sbjct: 175 KIPIRWTAPEAIQYRK----FTSASDVWSYGIVMWE-------VMSYGERPYWDMTNQDV 223
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
I AI RL P + + C +KD R
Sbjct: 224 INAIEQDYRLPPPMDCPSALHQLMLDCWQKDRNHR 258
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 65/274 (23%), Positives = 116/274 (42%), Gaps = 27/274 (9%)
Query: 48 DLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFI 107
DL L LG G G+V ++ K Y + + ++ + EA+++ L + +
Sbjct: 10 DLTFLKELGTGQFGVV---KYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKL 66
Query: 108 VKCHAVFYTIEGEICFVMEHMERGSLFDSLR-VRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
V+ + V T + I + E+M G L + LR +R + + + V + ++YL Q
Sbjct: 67 VQLYGVC-TKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLEMCKDVCEAMEYLESKQ 125
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
+H D+ N L+N +G VK++DFG+SR V + ++ +
Sbjct: 126 FLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYT-------------SSRGSKFPVRW 172
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGER 285
PE + + + D+W+ GV++ E +G P F I G R
Sbjct: 173 SPPEVLMYSK----FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAE----HIAQGLR 224
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
L P AS + + SC + +R T + LL+
Sbjct: 225 LYRPHLASEKVYTIMYSCWHEKADERPTFKILLS 258
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 70
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R++++ V+ +A ++ ++YL
Sbjct: 71 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 173
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 174 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 225
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
R+E PE + +R+C + + R + E+
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/277 (24%), Positives = 118/277 (42%), Gaps = 33/277 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 13 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 70
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R++++ V+ +A ++ ++YL
Sbjct: 71 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSAMEYLEK 129
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 130 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTYTAHAGAK 173
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALICAI 280
+ +PE + + + DVW+ GV++ E G P G DL + +
Sbjct: 174 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGI----DLSQVYELL 225
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
R+E PE + +R+C + + R + E+
Sbjct: 226 EKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 110 CHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKG 158
V +G+ V ME M RG L LR +R ++ + + +A + G
Sbjct: 86 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ YL+ + +H D+ N ++ VKI DFG++R + ET G+ +
Sbjct: 144 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG--------GKGLL 195
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALI 277
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 196 P----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVL 243
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 23 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 82
Query: 110 CHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKG 158
V +G+ V ME M RG L LR +R ++ + + +A + G
Sbjct: 83 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADG 140
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ YL+ + +H D+ N ++ VKI DFG++R + ET G+ +
Sbjct: 141 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG--------GKGLL 192
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALI 277
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 193 P----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVL 240
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 241 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 282
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 15 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG ++++ EE G+ I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--------GKVPIK 184
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 185 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 227
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 26 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 85
Query: 110 CHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKG 158
V +G+ V ME M RG L LR +R ++ + + +A + G
Sbjct: 86 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 143
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ YL+ + +H D+ N ++ VKI DFG++R + ET G+ +
Sbjct: 144 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG--------GKGLL 195
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALI 277
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 196 P----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVL 243
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 244 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 110 CHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKG 158
V +G+ V ME M RG L LR +R ++ + + +A + G
Sbjct: 80 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ YL+ + +H D+ N ++ VKI DFG++R + ET G+ +
Sbjct: 138 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG--------GKGLL 189
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALI 277
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 190 P----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVL 237
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 238 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 279
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/237 (25%), Positives = 103/237 (43%), Gaps = 27/237 (11%)
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICF-VMEHMERG--SLFDSLRVRKKLSEDVISGV 151
E ++L+RL + +++ V Y E + + VME+ G + DS+ K+ G
Sbjct: 56 EIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVP-EKRFPVCQAHGY 114
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++ GL+YLH I+H DIKP NLL+ G +KI+ GV+ +
Sbjct: 115 FCQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHP------------F 162
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDY--GFAGDVWSLGVVVLECLVGHYPLIGFGE 269
+ G+ A+ PE + G D GF D+WS GV + G YP E
Sbjct: 163 AADDTCRTSQGSPAFQPPEIAN----GLDTFSGFKVDIWSAGVTLYNITTGLYPF----E 214
Query: 270 KPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
++ L I G +P P ++ LE + KR ++ ++ + + K+
Sbjct: 215 GDNIYKLFENIGKGS-YAIPGDCGPPLSDLLKGMLEYEPAKRFSIRQIRQHSWFRKK 270
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 27 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 86
Query: 110 CHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKG 158
V +G+ V ME M RG L LR +R ++ + + +A + G
Sbjct: 87 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 144
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ YL+ + +H D+ N ++ VKI DFG++R + ET G+ +
Sbjct: 145 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG--------GKGLL 196
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALI 277
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 197 P----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVL 244
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 245 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 22 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 82 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG ++++ EE G+ I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEG--------GKVPIK 191
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 192 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 234
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 235 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 122/282 (43%), Gaps = 39/282 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 24 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 83
Query: 110 CHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKG 158
V +G+ V ME M RG L LR +R ++ + + +A + G
Sbjct: 84 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 141
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ YL+ + +H D+ N ++ VKI DFG++R + ET G+ +
Sbjct: 142 MAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKG--------GKGLL 193
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALI 277
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 194 P----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVL 241
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 242 RFVMEGGLLDKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 283
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 11 TDITMKHKLGGGQFGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 68
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R+++S V+ +A ++ ++YL
Sbjct: 69 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTXTAHAGAK 171
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFGEKPDLMALIC 278
+ +PE + + + DVW+ GV++ E + YP I + +L+
Sbjct: 172 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-- 225
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 226 ----DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 96/218 (44%), Gaps = 17/218 (7%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIR-HQAAHEAEILKRLDSQFIVKCHA 112
++G G+ G VY + + A+K +N +I + E IL RL S +I++ +
Sbjct: 33 LIGRGSYGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYD 92
Query: 113 VFYTIE----GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ + E+ V+E + L + L+E+ I + Y +L G ++H II
Sbjct: 93 LIIPDDLLKFDELYIVLE-IADSDLKKLFKTPIFLTEEHIKTILYNLLLGENFIHESGII 151
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXX--------XXXIGEAAIAC 220
H D+KP+N L+N VK+ DFG++R + + + + +
Sbjct: 152 HRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSH 211
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+ T Y +PE + +Y + D+WS G + E L
Sbjct: 212 VVTRWYRAPELI---LLQENYTKSIDIWSTGCIFAELL 246
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 114/283 (40%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+K L +S + EA ++ +
Sbjct: 12 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 71
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ +G+ Y
Sbjct: 72 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAEGMNY 129
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 130 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 181
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 182 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 224
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 225 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 267
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 123/297 (41%), Gaps = 50/297 (16%)
Query: 54 VLGHGNGGIV-----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIV 108
VLG G G V Y + + A+K+L + + R E +++ +L S +
Sbjct: 52 VLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENI 111
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRV-RKKLSEDVIS------------------ 149
T+ G I + E+ G L + LR R+K SED I
Sbjct: 112 VNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTF 171
Query: 150 ----GVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR-IVEETRXXXX 204
AY+V KG+++L +H D+ N+L+ VKI DFG++R I+ ++
Sbjct: 172 EDLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVR 231
Query: 205 XXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYP 263
G A + +M+PE + + G Y DVWS G+++ E +G P
Sbjct: 232 ---------GNARLP----VKWMAPESL----FEGIYTIKSDVWSYGILLWEIFSLGVNP 274
Query: 264 LIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
G + LI G +++ P A+ E ++SC D RKR + L ++
Sbjct: 275 YPGIPVDANFYKLIQN---GFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSF 328
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VLG G G VYK +K A+ L +S + EA ++ +
Sbjct: 49 TEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASV 108
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 109 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 166
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 167 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 218
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 219 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 261
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 262 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 304
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VL G G VYK +K A+K L +S + EA ++ +
Sbjct: 15 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 74
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 75 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 132
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 133 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 184
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 185 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 227
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 228 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 270
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 211
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 259
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 260 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 28/211 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS-------QF 106
+G G G VYK R S ALK + + + E +L+RL++ +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 107 IVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
+ C E ++ V EH+++ + L + I + + L+GL +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
I+H D+KP N+L+ G VK+ADFG++RI A + T
Sbjct: 132 CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---------------ALFPVVVTLW 176
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLE 256
Y +PE + Y D+WS+G + E
Sbjct: 177 YRAPEVL----LQSTYATPVDMWSVGCIFAE 203
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/294 (24%), Positives = 127/294 (43%), Gaps = 38/294 (12%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
+D+ LG G G VY+ +K + A+K L T+ + EA ++K +
Sbjct: 11 TDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLK--EDTMEVEEFLKEAAVMKEIKHPN 68
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHG 164
+V+ V T E + E M G+L D LR R+++S V+ +A ++ ++YL
Sbjct: 69 LVQLLGVC-TREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSAMEYLEK 127
Query: 165 MQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT- 223
IH D+ N L+ VK+ADFG+SR++ G+ A G
Sbjct: 128 KNFIHRDLAARNCLVGENHLVKVADFGLSRLM----------------TGDTFTAHAGAK 171
Query: 224 --CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFGEKPDLMALIC 278
+ +PE + + + DVW+ GV++ E + YP I + +L+
Sbjct: 172 FPIKWTAPESLAYNK----FSIKSDVWAFGVLLWEIATYGMSPYPGIDPSQVYELLEK-- 225
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL-LAYPFVTKRSSSSN 331
R+E PE + +R+C + + R + E+ A+ + + SS S+
Sbjct: 226 ----DYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISD 275
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 196
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 244
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 245 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/283 (24%), Positives = 113/283 (39%), Gaps = 38/283 (13%)
Query: 47 SDLKKLTVLGHGNGGIVYK----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
++ KK+ VL G G VYK +K A+K L +S + EA ++ +
Sbjct: 22 TEFKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASV 81
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQY 161
D+ + C + + + + + M G L D +R K + + ++ KG+ Y
Sbjct: 82 DNPHV--CRLLGICLTSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWCVQIAKGMNY 139
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIV--EETRXXXXXXXXXXXXIGEAAIA 219
L +++H D+ N+L+ VKI DFG+++++ EE G+ I
Sbjct: 140 LEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEG--------GKVPIK 191
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----DLMA 275
M + + R+ Y DVWS GV V E L+ FG KP
Sbjct: 192 WMALESIL--HRI--------YTHQSDVWSYGVTVWE-------LMTFGSKPYDGIPASE 234
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ + GERL P + + + C D R EL+
Sbjct: 235 ISSILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELI 277
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 211
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 259
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 260 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 108/275 (39%), Gaps = 37/275 (13%)
Query: 38 PTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
P V N DL +G GN G V+ R + N++ A+K T ++ + EA
Sbjct: 105 PKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR 164
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR-KKLSEDVISGVAYRVL 156
ILK+ IV+ V T + I VME ++ G LR +L + +
Sbjct: 165 ILKQYSHPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL IH D+ N L+ K +KI+DFG+SR EE +
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EE---------------ADG 266
Query: 217 AIACMG-----TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
A G + +PE ++ G Y DVWS G+++ E YP +
Sbjct: 267 VXAASGGLRQVPVKWTAPEALNY----GRYSSESDVWSFGILLWETFSLGASPYPNLSNQ 322
Query: 269 EKPDLMALICAICFGERLEMPETASPEFRRFVRSC 303
+ + + G RL PE R + C
Sbjct: 323 QTREFVEK------GGRLPCPELCPDAVFRLMEQC 351
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 31/214 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI----IRHQAAHEAEILKRLDS------ 104
+G G G VYK R S ALK + + + E +L+RL++
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNV 76
Query: 105 -QFIVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ + C E ++ V EH+++ + L + I + + L+GL +L
Sbjct: 77 VRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFL 136
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H I+H D+KP N+L+ G VK+ADFG++RI A +
Sbjct: 137 HANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---------------ALTPVVV 181
Query: 223 TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE 256
T Y +PE + Y D+WS+G + E
Sbjct: 182 TLWYRAPEVL----LQSTYATPVDMWSVGCIFAE 211
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/282 (23%), Positives = 121/282 (42%), Gaps = 39/282 (13%)
Query: 55 LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G+ G+VY+ V + + A+K +N +S R + +EA ++K + +V+
Sbjct: 20 LGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVR 79
Query: 110 CHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSEDVISG---------VAYRVLKG 158
V +G+ V ME M RG L LR +R ++ + + +A + G
Sbjct: 80 LLGV--VSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADG 137
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ YL+ + +H D+ N + VKI DFG++R + ET G+ +
Sbjct: 138 MAYLNANKFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKG--------GKGLL 189
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE-CLVGHYPLIGFGEKPDLMALI 277
+MSPE + G + DVWS GVV+ E + P G + ++
Sbjct: 190 P----VRWMSPESLKD----GVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNE----QVL 237
Query: 278 CAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
+ G L+ P+ +R C + + + R + E+++
Sbjct: 238 RFVMEGGLLDKPDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 279
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 55 LGHGNGGIVYKVRHQKSNSIY-ALKVLNTTS-------STI-----IRHQAAHEAEILKR 101
+G G G V+K R K+ + ALK + + STI +RH E + R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERG--SLFDSLRVRKKLSEDVISGVAYRVLKGL 159
L F V C E ++ V EH+++ + D + + + I + +++L+GL
Sbjct: 79 L---FDV-CTVSRTDRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMMFQLLRGL 133
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+LH +++H D+KP N+L+ G++K+ADFG++RI A +
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---------------FQMALTS 178
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE 256
+ T Y +PE + Y D+WS+G + E
Sbjct: 179 VVVTLWYRAPEVL----LQSSYATPVDLWSVGCIFAE 211
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 108/275 (39%), Gaps = 37/275 (13%)
Query: 38 PTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAE 97
P V N DL +G GN G V+ R + N++ A+K T ++ + EA
Sbjct: 105 PKDKWVLNHEDLVLGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEAR 164
Query: 98 ILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVR-KKLSEDVISGVAYRVL 156
ILK+ IV+ V T + I VME ++ G LR +L + +
Sbjct: 165 ILKQYSHPNIVRLIGVC-TQKQPIYIVMELVQGGDFLTFLRTEGARLRVKTLLQMVGDAA 223
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL IH D+ N L+ K +KI+DFG+SR EE +
Sbjct: 224 AGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSR--EE---------------ADG 266
Query: 217 AIACMG-----TCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
A G + +PE ++ G Y DVWS G+++ E YP +
Sbjct: 267 VYAASGGLRQVPVKWTAPEALNY----GRYSSESDVWSFGILLWETFSLGASPYPNLSNQ 322
Query: 269 EKPDLMALICAICFGERLEMPETASPEFRRFVRSC 303
+ + + G RL PE R + C
Sbjct: 323 QTREFVEK------GGRLPCPELCPDAVFRLMEQC 351
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 197
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 245
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 246 DEEIIGGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 88/211 (41%), Gaps = 28/211 (13%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTI-IRHQAAHEAEILKRLDS-------QF 106
+G G G VYK R S ALK + + + E +L+RL++ +
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLEAFEHPNVVRL 71
Query: 107 IVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGM 165
+ C E ++ V EH+++ + L + I + + L+GL +LH
Sbjct: 72 MDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLHAN 131
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
I+H D+KP N+L+ G VK+ADFG++RI A + T
Sbjct: 132 CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---------------ALAPVVVTLW 176
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLE 256
Y +PE + Y D+WS+G + E
Sbjct: 177 YRAPEVL----LQSTYATPVDMWSVGCIFAE 203
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/300 (22%), Positives = 121/300 (40%), Gaps = 50/300 (16%)
Query: 31 HHFPTSNPTSPDVENIS-DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNT 82
H P ++P + + D K LT+ LG GN G V K +Q + + + N
Sbjct: 4 HESPYADPEEIRPKEVYLDRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNE 63
Query: 83 TSSTIIRHQAAHEAEILKRLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLR 138
+ ++ + EA ++++LD+ +IV+ C A + + VME E G L L+
Sbjct: 64 ANDPALKDELLAEANVMQQLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQ 117
Query: 139 VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
+ + + I + ++V G++YL +H D+ N+L+ + KI+DFG+S+ +
Sbjct: 118 QNRHVKDKNIIELVHQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRA 177
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+ A C+ + S DVWS GV++ E
Sbjct: 178 DENYYKAQTHGKWPVKWYAPECINYYKFSS---------------KSDVWSFGVLMWEAF 222
Query: 259 VGHYPLIGFGEKP-------DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+KP ++ A++ GER+ P E + C D R
Sbjct: 223 -------SYGQKPYRGMKGSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 272
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 183
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 184 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 231
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 232 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 169
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 217
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 218 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 117 WQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 164
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 212
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 213 DEEIIRGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 184
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 232
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 233 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 197
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 245
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 246 DEEIIGGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 196
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 244
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 245 DEEIIGGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 109 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 168
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 169 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 216
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 217 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 264
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 265 DEEIIRGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 310
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 96 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 155
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 156 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 203
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 204 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 251
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 252 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 297
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 169
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 217
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 218 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 196
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 244
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 245 DEEIIGGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 104 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 163
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 164 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 211
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 212 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 259
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 260 DEEIIRGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 305
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 61 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 120
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 121 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 168
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 169 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 216
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 217 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 262
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 62 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 121
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 122 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 169
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 170 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 217
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 218 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 263
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 76 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 135
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 136 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 183
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 184 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 231
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 232 DEEIIRGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 277
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 60 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 119
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 120 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 167
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 168 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 215
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 216 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 261
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 114/291 (39%), Gaps = 56/291 (19%)
Query: 55 LGHGNGGIV-----YKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVK 109
LG G G V Y + K + A+K L + R EAE+L L + IVK
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKD-PTLAARKDFQREAELLTNLQHEHIVK 81
Query: 110 CHAVFYTIEGE---ICFVMEHMERGSLFDSLRVRKKLSEDVISG---------------- 150
FY + G+ + V E+M+ G L LR + ++ G
Sbjct: 82 ----FYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLH 137
Query: 151 VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXX 210
+A ++ G+ YL +H D+ N L+ VKI DFG+SR V T
Sbjct: 138 IASQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYY-------- 189
Query: 211 XXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEK 270
M +M PE + ++ + DVWS GV++ E + +G++
Sbjct: 190 ----RVGGHTMLPIRWMPPESIMYRKFTTE----SDVWSFGVILWE-------IFTYGKQ 234
Query: 271 PDLM----ALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
P +I I G LE P E + C +++ ++R ++E+
Sbjct: 235 PWFQLSNTEVIECITQGRVLERPRVCPKEVYDVMLGCWQREPQQRLNIKEI 285
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 197
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 245
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 246 DEEIIGGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 98/217 (45%), Gaps = 39/217 (17%)
Query: 55 LGHGNGGIVYKVRHQKSNSIY-ALKVLNTTS-------STI-----IRHQAAHEAEILKR 101
+G G G V+K R K+ + ALK + + STI +RH E + R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERG--SLFDSLRVRKKLSEDVISGVAYRVLKGL 159
L F V C E ++ V EH+++ + D + + + I + +++L+GL
Sbjct: 79 L---FDV-CTVSRTDRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMMFQLLRGL 133
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+LH +++H D+KP N+L+ G++K+ADFG++RI A +
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---------------FQMALTS 178
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE 256
+ T Y +PE + Y D+WS+G + E
Sbjct: 179 VVVTLWYRAPEVL----LQSSYATPVDLWSVGCIFAE 211
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 184
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 232
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 233 DEEIIRGQVFFRQRV------SXECQHLIRWCLALRPXDRPTFEEIQNHPWM 278
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 124/310 (40%), Gaps = 42/310 (13%)
Query: 45 NISDLKKLT--VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL 102
D+ KLT +LG G V ++ YA+K++ + R + E E L +
Sbjct: 9 KFEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHS-RSRVFREVETLYQC 67
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
+ F+ + V E ++ GS+ ++ +K +E S V V L +L
Sbjct: 68 QGNKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKHFNEREASRVVRDVAAALDFL 127
Query: 163 HGMQIIHGDIKPSNLLINGK---GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
H I H D+KP N+L VKI DF + ++ E
Sbjct: 128 HTKGIAHRDLKPENILCESPEKVSPVKICDFDLGSGMK------LNNSCTPITTPELTTP 181
Query: 220 CMGTCAYMSPERVDS-ERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGF---------GE 269
C G+ YM+PE V+ Y D+WSLGVV+ L G+ P +G GE
Sbjct: 182 C-GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCGADCGWDRGE 240
Query: 270 KPDLMALICAICFGE--------RLEMPETA----SPEFRRFVRSCLEKDWRKRGTVEEL 317
+C +C + + E P+ S E + + L +D ++R + ++
Sbjct: 241 -------VCRVCQNKLFESIQEGKYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQV 293
Query: 318 LAYPFVTKRS 327
L +P+V ++
Sbjct: 294 LQHPWVQGQA 303
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 77 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 136
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 137 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 184
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 185 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 232
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 233 DEEIIRGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 278
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 90 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 149
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 150 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 197
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 198 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 245
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 246 DEEIIGGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 291
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 89 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 148
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 149 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 196
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 197 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 244
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 245 DEEIIGGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 290
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 164
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 212
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 213 DEEIIRGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 96/217 (44%), Gaps = 39/217 (17%)
Query: 55 LGHGNGGIVYKVRHQKSNSIY-ALKVLNTTSS------------TIIRHQAAHEAEILKR 101
+G G G V+K R K+ + ALK + + ++RH E + R
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERG--SLFDSLRVRKKLSEDVISGVAYRVLKGL 159
L F V C E ++ V EH+++ + D + + + I + +++L+GL
Sbjct: 79 L---FDV-CTVSRTDRETKLTLVFEHVDQDLTTYLDKVP-EPGVPTETIKDMMFQLLRGL 133
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+LH +++H D+KP N+L+ G++K+ADFG++RI A +
Sbjct: 134 DFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYS---------------FQMALTS 178
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE 256
+ T Y +PE + Y D+WS+G + E
Sbjct: 179 VVVTLWYRAPEVL----LQSSYATPVDLWSVGCIFAE 211
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/213 (26%), Positives = 88/213 (41%), Gaps = 32/213 (15%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILKRLDS------- 104
+G G G VYK R S ALK V N I E +L+RL++
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPI--STVREVALLRRLEAFEHPNVV 69
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
+ + C E ++ V EH+++ + L + I + + L+GL +LH
Sbjct: 70 RLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMRQFLRGLDFLH 129
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
I+H D+KP N+L+ G VK+ADFG++RI A + T
Sbjct: 130 ANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQM---------------ALDPVVVT 174
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLE 256
Y +PE + Y D+WS+G + E
Sbjct: 175 LWYRAPEVL----LQSTYATPVDMWSVGCIFAE 203
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 84 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 143
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 144 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 191
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 192 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 239
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 240 DEEIIRGQVFFRQRV------SXECQHLIRWCLALRPSDRPTFEEIQNHPWM 285
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 56/232 (24%), Positives = 105/232 (45%), Gaps = 33/232 (14%)
Query: 95 EAEILKRLDSQF--IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVA 152
E +LK++ S F +++ F + + + LFD + R L E++
Sbjct: 57 EVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDFITERGALQEELARSFF 116
Query: 153 YRVLKGLQYLHGMQIIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
++VL+ +++ H ++H DIK N+LI+ +GE+K+ DFG ++++T
Sbjct: 117 WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDT------------ 164
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP 271
GT Y PE + R+ +G + VWSLG+++ + + G P +
Sbjct: 165 ----VYTDFDGTRVYSPPEWIRYHRY---HGRSAAVWSLGILLYDMVCGDIPF-----EH 212
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
D + + F +R+ S E + +R CL R T EE+ +P++
Sbjct: 213 DEEIIGGQVFFRQRV------SSECQHLIRWCLALRPSDRPTFEEIQNHPWM 258
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 32/279 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYK-VRHQKSNSI---YALKVLNTTSSTIIRHQAAHEAEILKRL 102
++L+KL VLG G G V+K V + SI +KV+ S + L
Sbjct: 13 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 72
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV-RKKLSEDVISGVAYRVLKGLQY 161
D IV+ + + V +++ GSL D +R R L ++ ++ KG+ Y
Sbjct: 73 DHAHIVRLLGL--CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 130
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L ++H ++ N+L+ +V++ADFGV+ ++
Sbjct: 131 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT----------- 179
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIG--FGEKPDLMALIC 278
+M+ E + G Y DVWS GV V E + G P G E PDL+
Sbjct: 180 -PIKWMALESIHF----GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE--- 231
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
GERL P+ + + + C D R T +EL
Sbjct: 232 ---KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 267
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/227 (27%), Positives = 96/227 (42%), Gaps = 13/227 (5%)
Query: 44 ENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLD 103
E++ L++ VLG G V + ++ YA+K++ I R + E E+L +
Sbjct: 11 EDVYQLQE-DVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHI-RSRVFREVEMLYQCQ 68
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
V F+ E V E M GS+ + R+ +E S V V L +LH
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEASVVVQDVASALDFLH 128
Query: 164 GMQIIHGDIKPSNLLI---NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
I H D+KP N+L N VKI DF + ++ E C
Sbjct: 129 NKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIK------LNGDCSPISTPELLTPC 182
Query: 221 MGTCAYMSPERVDS-ERWGGDYGFAGDVWSLGVVVLECLVGHYPLIG 266
G+ YM+PE V++ Y D+WSLGV++ L G+ P +G
Sbjct: 183 -GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVG 228
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 113/279 (40%), Gaps = 32/279 (11%)
Query: 47 SDLKKLTVLGHGNGGIVYK-VRHQKSNSI---YALKVLNTTSSTIIRHQAAHEAEILKRL 102
++L+KL VLG G G V+K V + SI +KV+ S + L
Sbjct: 31 TELRKLKVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSL 90
Query: 103 DSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRV-RKKLSEDVISGVAYRVLKGLQY 161
D IV+ + + V +++ GSL D +R R L ++ ++ KG+ Y
Sbjct: 91 DHAHIVRLLGL--CPGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWGVQIAKGMYY 148
Query: 162 LHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
L ++H ++ N+L+ +V++ADFGV+ ++
Sbjct: 149 LEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT----------- 197
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIG--FGEKPDLMALIC 278
+M+ E + G Y DVWS GV V E + G P G E PDL+
Sbjct: 198 -PIKWMALESIHF----GKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDLLE--- 249
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEEL 317
GERL P+ + + + C D R T +EL
Sbjct: 250 ---KGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKEL 285
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 367 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 426
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 427 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 480
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 481 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 540
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 541 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 578
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 579 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 617
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 366 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 425
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 426 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 479
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 480 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 539
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 540 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 577
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 578 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 616
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 102/223 (45%), Gaps = 23/223 (10%)
Query: 56 GHGNGGIVYK-VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
G G G+VYK + + ++ L + ++ ++ Q E ++ + + +V+ F
Sbjct: 31 GEGGFGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLG-F 89
Query: 115 YTIEGEICFVMEHMERGSLFDSLRV---RKKLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
+ ++C V + GSL D L LS +A G+ +LH IH D
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGTPPLSWHXRCKIAQGAANGINFLHENHHIHRD 149
Query: 172 IKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPER 231
IK +N+L++ KI+DFG++R E+ + + I +GT AY +PE
Sbjct: 150 IKSANILLDEAFTAKISDFGLARASEK----------FAQXVXXSRI--VGTTAYXAPEA 197
Query: 232 VDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLM 274
+ G+ D++S GVV+LE + G P + +P L+
Sbjct: 198 LR-----GEITPKSDIYSFGVVLLEIITG-LPAVDEHREPQLL 234
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 114/298 (38%), Gaps = 54/298 (18%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSN--SIYALKVLNTTSSTIIRHQAAH 94
+PT V + +D+K V+G GN G V K R +K A+K + +S A
Sbjct: 5 DPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG 64
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E E+L +L + G + +E+ G+L D LR + L D +A
Sbjct: 65 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 124
Query: 155 ----------------VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
V +G+ YL Q IH D+ N+L+ KIADFG+SR E
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE- 183
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+G + M ++S + Y DVWS GV++ E
Sbjct: 184 --------VYVKKTMGRLPVRWMA---------IESLNYSV-YTTNSDVWSYGVLLWE-- 223
Query: 259 VGHYPLIGFGEKPDLMALICAICF-----GERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ G P + CA + G RLE P E +R C WR++
Sbjct: 224 -----IVSLGGTP-YCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC----WREK 271
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 24 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 84 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 137
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 138 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 198 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 235
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 236 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 274
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 24 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 83
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 84 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 137
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 138 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 197
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 198 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 235
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 236 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 274
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 76/298 (25%), Positives = 115/298 (38%), Gaps = 54/298 (18%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSN--SIYALKVLNTTSSTIIRHQAAH 94
+PT V + +D+K V+G GN G V K R +K A+K + +S A
Sbjct: 15 DPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG 74
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E E+L +L + G + +E+ G+L D LR + L D +A
Sbjct: 75 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134
Query: 155 ----------------VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
V +G+ YL Q IH D+ N+L+ KIADFG+SR E
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQE- 193
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+G + +M+ E ++ Y DVWS GV++ E
Sbjct: 194 --------VYVKKTMGRLPV------RWMAIESLNYSV----YTTNSDVWSYGVLLWE-- 233
Query: 259 VGHYPLIGFGEKPDLMALICAICF-----GERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ G P + CA + G RLE P E +R C WR++
Sbjct: 234 -----IVSLGGTP-YCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC----WREK 281
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 88/197 (44%), Gaps = 33/197 (16%)
Query: 94 HEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSL--FDS-LRVRKK-----LSE 145
+E +I+ + +++ + C + T E+ + E+ME S+ FD V K +
Sbjct: 92 NELQIITDIKNEYCLTCEGII-TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPI 150
Query: 146 DVISGVAYRVLKGLQYLHGMQ-IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXX 204
VI + VL Y+H + I H D+KPSN+L++ G VK++DFG S +
Sbjct: 151 QVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYM-------- 202
Query: 205 XXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYP 263
+ + GT +M PE +E G D+WSLG+ CL V Y
Sbjct: 203 --------VDKKIKGSRGTYEFMPPEFFSNESSYN--GAKVDIWSLGI----CLYVMFYN 248
Query: 264 LIGFGEKPDLMALICAI 280
++ F K L+ L I
Sbjct: 249 VVPFSLKISLVELFNNI 265
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 8 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 68 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 121
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 122 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 181
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 182 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 219
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 220 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 258
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/288 (23%), Positives = 121/288 (42%), Gaps = 30/288 (10%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAA---HEAEILKRLD 103
D + L V+G G V V+ +++ +YA+K++N + R + + E ++L D
Sbjct: 61 DDFEILKVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWD-MLKRGEVSCFREERDVLVNGD 119
Query: 104 SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSL-RVRKKLSEDVISGVAYRVLKGLQYL 162
++I + H F E + VME+ G L L + +++ ++ ++ + +
Sbjct: 120 RRWITQLHFAFQD-ENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSV 178
Query: 163 HGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMG 222
H + +H DIKP N+L++ G +++ADFG + ++ +G
Sbjct: 179 HRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVR-------------SLVAVG 225
Query: 223 TCAYMSPE---RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA 279
T Y+SPE V G YG D W+LGV E G P +
Sbjct: 226 TPDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKI--- 282
Query: 280 ICFGERLEMP---ETASPEFRRFVRS--CLEKDWRKRGTVEELLAYPF 322
+ + E L +P E E R F++ C + RG + +PF
Sbjct: 283 VHYKEHLSLPLVDEGVPEEARDFIQRLLCPPETRLGRGGAGDFRTHPF 330
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 4 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 63
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 64 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 117
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 118 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 177
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 178 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 215
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 216 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/271 (23%), Positives = 111/271 (40%), Gaps = 25/271 (9%)
Query: 54 VLGHGNGGIVYKVRH--QKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G+VY + Q N I A+K L+ + E +++ L+ ++
Sbjct: 28 VIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLAL 87
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLRV--RKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG ++ +M G L +R R +D+IS +V +G++YL + +
Sbjct: 88 IGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS-FGLQVARGMEYLAEQKFV 146
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSR-IVEETRXXXXXXXXXXXXIGEAAIACMGTCAYM 227
H D+ N +++ VK+ADFG++R I++ + A+ + T +
Sbjct: 147 HRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWTALESLQTYRFT 206
Query: 228 SPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLE 287
+ DVWS GV++ E L P + DL + G RL
Sbjct: 207 T---------------KSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQ---GRRLP 248
Query: 288 MPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
PE + ++ C E D R T L+
Sbjct: 249 QPEYCPDSLYQVMQQCWEADPAVRPTFRVLV 279
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 14 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 73
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 74 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 127
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 128 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 187
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 188 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 225
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 226 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 264
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/282 (23%), Positives = 115/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 8 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 67
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 68 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 121
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 122 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWY 181
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 182 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 219
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 220 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 258
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 135/305 (44%), Gaps = 42/305 (13%)
Query: 33 FPTSNPTSPDVENISDLKKLTVL---GHGNGGIVYK-----VRHQKSNSIYALKVLNTTS 84
FP+S PD +S +K+T+L G G+ G+VY+ + ++ + A+K +N ++
Sbjct: 2 FPSSV-FVPDEWEVSR-EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 59
Query: 85 STIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLS 144
S R + +EA ++K +V+ V + + VME M G L LR + +
Sbjct: 60 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-VMELMAHGDLKSYLRSLRPEA 118
Query: 145 ED----------VISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
E+ + +A + G+ YL+ + +H D+ N ++ VKI DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 195 IVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVV 254
+ ET G+ + +M+PE + G + + D+WS GVV+
Sbjct: 179 DIXETDXXRKG--------GKGLLP----VRWMAPESLKD----GVFTTSSDMWSFGVVL 222
Query: 255 LECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGT 313
E + P G + ++ + G L+ P+ +R C + + + R T
Sbjct: 223 WEITSLAEQPYQGLSNE----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 314 VEELL 318
E++
Sbjct: 279 FLEIV 283
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/282 (23%), Positives = 114/282 (40%), Gaps = 49/282 (17%)
Query: 48 DLKKLTV----LGHGNGGIVYKVRHQKSNSIYALK---VLNTTSSTIIRHQAAHEAEILK 100
D K LT+ LG GN G V K +Q + + + N + ++ + EA +++
Sbjct: 2 DRKLLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQ 61
Query: 101 RLDSQFIVK----CHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL 156
+LD+ +IV+ C A + + VME E G L L+ + + + I + ++V
Sbjct: 62 QLDNPYIVRMIGICEAESWML------VMEMAELGPLNKYLQQNRHVKDKNIIELVHQVS 115
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G++YL +H D+ N+L+ + KI+DFG+S+ + +
Sbjct: 116 MGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWY 175
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKP----- 271
A C+ + S DVWS GV++ E +G+KP
Sbjct: 176 APECINYYKFSS---------------KSDVWSFGVLMWEAF-------SYGQKPYRGMK 213
Query: 272 --DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ A++ GER+ P E + C D R
Sbjct: 214 GSEVTAMLEK---GERMGCPAGCPREMYDLMNLCWTYDVENR 252
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/283 (23%), Positives = 123/283 (43%), Gaps = 37/283 (13%)
Query: 52 LTVLGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
L LG G+ G+VY+ + ++ + A+K +N ++S R + +EA ++K
Sbjct: 19 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 78
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSED----------VISGVAYRVL 156
+V+ V + + VME M G L LR + +E+ + +A +
Sbjct: 79 VVRLLGVVSKGQPTLV-VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G+ YL+ + +H D+ N ++ VKI DFG++R + ET G+
Sbjct: 138 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKG--------GKG 189
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMA 275
+ +M+PE + G + + D+WS GVV+ E + P G +
Sbjct: 190 LLP----VRWMAPESLKD----GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE----Q 237
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
++ + G L+ P+ +R C + + + R T E++
Sbjct: 238 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 280
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 42/305 (13%)
Query: 33 FPTSNPTSPDVENISDLKKLTVL---GHGNGGIVYK-----VRHQKSNSIYALKVLNTTS 84
FP+S PD +S +K+T+L G G+ G+VY+ + ++ + A+K +N ++
Sbjct: 2 FPSSV-FVPDEWEVSR-EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 59
Query: 85 STIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLS 144
S R + +EA ++K +V+ V + + VME M G L LR + +
Sbjct: 60 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-VMELMAHGDLKSYLRSLRPEA 118
Query: 145 ED----------VISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
E+ + +A + G+ YL+ + +H D+ N ++ VKI DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 195 IVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVV 254
+ ET G+ + +M+PE + G + + D+WS GVV+
Sbjct: 179 DIYETAYYRKG--------GKGLLP----VRWMAPESLKD----GVFTTSSDMWSFGVVL 222
Query: 255 LECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGT 313
E + P G + ++ + G L+ P+ +R C + + + R T
Sbjct: 223 WEITSLAEQPYQGLSNE----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 314 VEELL 318
E++
Sbjct: 279 FLEIV 283
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/305 (23%), Positives = 133/305 (43%), Gaps = 42/305 (13%)
Query: 33 FPTSNPTSPDVENISDLKKLTVL---GHGNGGIVYK-----VRHQKSNSIYALKVLNTTS 84
FP+S PD +S +K+T+L G G+ G+VY+ + ++ + A+K +N ++
Sbjct: 2 FPSSV-FVPDEWEVSR-EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 59
Query: 85 STIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLS 144
S R + +EA ++K +V+ V + + VME M G L LR + +
Sbjct: 60 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-VMELMAHGDLKSYLRSLRPEA 118
Query: 145 ED----------VISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
E+ + +A + G+ YL+ + +H D+ N ++ VKI DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 195 IVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVV 254
+ ET G+ + +M+PE + G + + D+WS GVV+
Sbjct: 179 DIYETDYYRKG--------GKGLLP----VRWMAPESLKD----GVFTTSSDMWSFGVVL 222
Query: 255 LECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGT 313
E + P G + ++ + G L+ P+ +R C + + + R T
Sbjct: 223 WEITSLAEQPYQGLSNE----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPT 278
Query: 314 VEELL 318
E++
Sbjct: 279 FLEIV 283
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/278 (24%), Positives = 117/278 (42%), Gaps = 32/278 (11%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNT--TSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G GIV++ S Y K + T +++ E IL + I+ H
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKK----EISILNIARHRNILHLHE 68
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQYLHGMQIIHGD 171
F ++E E+ + E + +F+ + +L+E I ++V + LQ+LH I H D
Sbjct: 69 SFESME-ELVMIFEFISGLDIFERINTSAFELNEREIVSYVHQVCEALQFLHSHNIGHFD 127
Query: 172 IKPSNLLINGK--GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSP 229
I+P N++ + +KI +FG +R ++ G+ Y +P
Sbjct: 128 IRPENIIYQTRRSSTIKIIEFGQARQLKP---------------GDNFRLLFTAPEYYAP 172
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICA-ICFGERLEM 288
E + A D+WSLG +V L G P + + + ++ A F E E
Sbjct: 173 EVHQHDVVST----ATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTFDE--EA 226
Query: 289 PETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTKR 326
+ S E FV L K+ + R T E L +P++ ++
Sbjct: 227 FKEISIEAMDFVDRLLVKERKSRMTASEALQHPWLKQK 264
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 73/305 (23%), Positives = 134/305 (43%), Gaps = 42/305 (13%)
Query: 33 FPTSNPTSPDVENISDLKKLTVL---GHGNGGIVYK-----VRHQKSNSIYALKVLNTTS 84
FP+S PD +S +K+T+L G G+ G+VY+ + ++ + A+K +N ++
Sbjct: 2 FPSSV-YVPDEWEVSR-EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 59
Query: 85 STIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLS 144
S R + +EA ++K +V+ V + + VME M G L LR + +
Sbjct: 60 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-VMELMAHGDLKSYLRSLRPEA 118
Query: 145 ED----------VISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
E+ + +A + G+ YL+ + +H D+ N ++ VKI DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTR 178
Query: 195 IVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVV 254
+ ET G+ + +M+PE + G + + D+WS GVV+
Sbjct: 179 DIXETDXXRKG--------GKGLLP----VRWMAPESLKD----GVFTTSSDMWSFGVVL 222
Query: 255 LECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGT 313
E + P G + ++ + G L+ P+ +R C + + R T
Sbjct: 223 WEITSLAEQPYQGLSNE----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPT 278
Query: 314 VEELL 318
E++
Sbjct: 279 FLEIV 283
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/290 (24%), Positives = 113/290 (38%), Gaps = 51/290 (17%)
Query: 47 SDLKKLTVLGHGNGGIVYKVRHQ-----KSNSIYALKVLNTTSSTIIRHQAAHEAEILKR 101
++++ + +G G G V++ R + ++ A+K+L +S ++ EA ++
Sbjct: 47 NNIEYVRDIGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAE 106
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-----KLSEDVISG------ 150
D+ IVK V + +C + E+M G L + LR LS +S
Sbjct: 107 FDNPNIVKLLGVC-AVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSS 165
Query: 151 -------------VAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVE 197
+A +V G+ YL + +H D+ N L+ VKIADFG+SR +
Sbjct: 166 PGPPPLSCAEQLCIARQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIY 225
Query: 198 ETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLEC 257
G AI +M PE + R Y DVW+ GVV+ E
Sbjct: 226 SADYYKAD--------GNDAI----PIRWMPPESIFYNR----YTTESDVWAYGVVLWEI 269
Query: 258 L-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEK 306
G P G + +I + G L PE E +R C K
Sbjct: 270 FSYGLQPYYGMAHE----EVIYYVRDGNILACPENCPLELYNLMRLCWSK 315
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 121/283 (42%), Gaps = 37/283 (13%)
Query: 52 LTVLGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQF 106
L LG G+ G+VY+ + ++ + A+K +N ++S R + +EA ++K
Sbjct: 21 LRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHH 80
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSED----------VISGVAYRVL 156
+V+ V + + VME M G L LR + +E+ + +A +
Sbjct: 81 VVRLLGVVSKGQPTLV-VMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 157 KGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEA 216
G+ YL+ + +H D+ N ++ VKI DFG++R + ET G+
Sbjct: 140 DGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKG--------GKG 191
Query: 217 AIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMA 275
+ +M+PE + G + + D+WS GVV+ E + P G +
Sbjct: 192 LLP----VRWMAPESLKD----GVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNE----Q 239
Query: 276 LICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
++ + G L+ P+ +R C + + + R T E++
Sbjct: 240 VLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPKMRPTFLEIV 282
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 115/298 (38%), Gaps = 54/298 (18%)
Query: 37 NPTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSN--SIYALKVLNTTSSTIIRHQAAH 94
+PT V + +D+K V+G GN G V K R +K A+K + +S A
Sbjct: 12 DPTIYPVLDWNDIKFQDVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAG 71
Query: 95 EAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYR 154
E E+L +L + G + +E+ G+L D LR + L D +A
Sbjct: 72 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 131
Query: 155 ----------------VLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
V +G+ YL Q IH ++ N+L+ KIADFG+SR E
Sbjct: 132 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRNLAARNILVGENYVAKIADFGLSRGQE- 190
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+G + +M+ E ++ Y DVWS GV++ E
Sbjct: 191 --------VYVKKTMGRLPV------RWMAIESLNYSV----YTTNSDVWSYGVLLWE-- 230
Query: 259 VGHYPLIGFGEKPDLMALICAICF-----GERLEMPETASPEFRRFVRSCLEKDWRKR 311
++ G P + CA + G RLE P E +R C WR++
Sbjct: 231 -----IVSLGGTP-YCGMTCAELYEKLPQGYRLEKPLNCDDEVYDLMRQC----WREK 278
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 56 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 115
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 116 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 174
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 175 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 224
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 225 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 275
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 276 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 308
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 153
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 203
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 204 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 254
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 255 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 55 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 114
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 115 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 173
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 174 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 223
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 224 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 274
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 275 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 307
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 64/273 (23%), Positives = 111/273 (40%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 154
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSV----------HNKTGAKLPVKWMA 204
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 205 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 255
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 256 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 155
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 205
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 206 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 256
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 257 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 29 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 88
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 89 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 147
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 148 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 197
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 198 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 248
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 249 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 281
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 32 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 91
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 92 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 150
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 151 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 200
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 201 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 251
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 252 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 284
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 155
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 205
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 206 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 256
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 257 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/175 (26%), Positives = 83/175 (47%), Gaps = 21/175 (12%)
Query: 145 EDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXX 204
ED+IS +++V +G+++L + IH D+ N+L++ VKI DFG++R + +
Sbjct: 199 EDLIS-YSFQVARGMEFLSSRKCIHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVR 257
Query: 205 XXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYP 263
G+ + +M+PE + + Y DVWS GV++ E +G P
Sbjct: 258 K--------GDTRLP----LKWMAPESI----FDKIYSTKSDVWSYGVLLWEIFSLGGSP 301
Query: 264 LIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
G D + + G R+ PE ++PE + + C +D ++R EL+
Sbjct: 302 YPGVQMDEDFCSRLRE---GMRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAELV 353
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 36 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 95
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 96 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 154
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 155 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 204
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 205 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 255
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 256 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 288
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 105/262 (40%), Gaps = 38/262 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L ++ R E ++L L + + TI G + E+ G L +
Sbjct: 57 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 116
Query: 136 SLRVRK------KLSEDVIS------------GVAYRVLKGLQYLHGMQIIHGDIKPSNL 177
LR ++ K S ++ +Y+V KG+ +L IH D+ N+
Sbjct: 117 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 176
Query: 178 LINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW 237
L+ KI DFG++R ++ G A + +M+PE + +
Sbjct: 177 LLTHGRITKICDFGLARDIKNDSNYVVK--------GNARLP----VKWMAPESI----F 220
Query: 238 GGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEF 296
Y F DVWS G+ + E +G P G +I G R+ PE A E
Sbjct: 221 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE---GFRMLSPEHAPAEM 277
Query: 297 RRFVRSCLEKDWRKRGTVEELL 318
+++C + D KR T ++++
Sbjct: 278 YDIMKTCWDADPLKRPTFKQIV 299
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 34 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 93
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG++YL + +
Sbjct: 94 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKYLASKKFV 152
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 153 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSV----------HNKTGAKLPVKWMA 202
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 203 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 253
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 254 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 286
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 105/262 (40%), Gaps = 38/262 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L ++ R E ++L L + + TI G + E+ G L +
Sbjct: 80 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 139
Query: 136 SLRVRK------KLSEDVIS------------GVAYRVLKGLQYLHGMQIIHGDIKPSNL 177
LR ++ K S ++ +Y+V KG+ +L IH D+ N+
Sbjct: 140 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 199
Query: 178 LINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW 237
L+ KI DFG++R ++ G A + +M+PE + +
Sbjct: 200 LLTHGRITKICDFGLARDIKNDSNYVVK--------GNARLP----VKWMAPESI----F 243
Query: 238 GGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEF 296
Y F DVWS G+ + E +G P G +I G R+ PE A E
Sbjct: 244 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE---GFRMLSPEHAPAEM 300
Query: 297 RRFVRSCLEKDWRKRGTVEELL 318
+++C + D KR T ++++
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIV 322
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 105/262 (40%), Gaps = 38/262 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L ++ R E ++L L + + TI G + E+ G L +
Sbjct: 80 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 139
Query: 136 SLRVRK------KLSEDVIS------------GVAYRVLKGLQYLHGMQIIHGDIKPSNL 177
LR ++ K S ++ +Y+V KG+ +L IH D+ N+
Sbjct: 140 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 199
Query: 178 LINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW 237
L+ KI DFG++R ++ G A + +M+PE + +
Sbjct: 200 LLTHGRITKICDFGLARHIKNDSNYVVK--------GNARLP----VKWMAPESI----F 243
Query: 238 GGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEF 296
Y F DVWS G+ + E +G P G +I G R+ PE A E
Sbjct: 244 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE---GFRMLSPEHAPAEM 300
Query: 297 RRFVRSCLEKDWRKRGTVEELL 318
+++C + D KR T ++++
Sbjct: 301 YDIMKTCWDADPLKRPTFKQIV 322
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 105/262 (40%), Gaps = 38/262 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L ++ R E ++L L + + TI G + E+ G L +
Sbjct: 73 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 132
Query: 136 SLRVRK------KLSEDVIS------------GVAYRVLKGLQYLHGMQIIHGDIKPSNL 177
LR ++ K S ++ +Y+V KG+ +L IH D+ N+
Sbjct: 133 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 192
Query: 178 LINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW 237
L+ KI DFG++R ++ G A + +M+PE + +
Sbjct: 193 LLTHGRITKICDFGLARDIKNDSNYVVK--------GNARLP----VKWMAPESI----F 236
Query: 238 GGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEF 296
Y F DVWS G+ + E +G P G +I G R+ PE A E
Sbjct: 237 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE---GFRMLSPEHAPAEM 293
Query: 297 RRFVRSCLEKDWRKRGTVEELL 318
+++C + D KR T ++++
Sbjct: 294 YDIMKTCWDADPLKRPTFKQIV 315
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/262 (23%), Positives = 105/262 (40%), Gaps = 38/262 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L ++ R E ++L L + + TI G + E+ G L +
Sbjct: 75 AVKMLKPSAHLTEREALMSELKVLSYLGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLN 134
Query: 136 SLRVRK------KLSEDVIS------------GVAYRVLKGLQYLHGMQIIHGDIKPSNL 177
LR ++ K S ++ +Y+V KG+ +L IH D+ N+
Sbjct: 135 FLRRKRDSFICSKTSPAIMEDDELALDLEDLLSFSYQVAKGMAFLASKNCIHRDLAARNI 194
Query: 178 LINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW 237
L+ KI DFG++R ++ G A + +M+PE + +
Sbjct: 195 LLTHGRITKICDFGLARDIKNDSNYVVK--------GNARLP----VKWMAPESI----F 238
Query: 238 GGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEF 296
Y F DVWS G+ + E +G P G +I G R+ PE A E
Sbjct: 239 NCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKE---GFRMLSPEHAPAEM 295
Query: 297 RRFVRSCLEKDWRKRGTVEELL 318
+++C + D KR T ++++
Sbjct: 296 YDIMKTCWDADPLKRPTFKQIV 317
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 37/260 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L + ++ E E++K + + T +G + ++E+ +G+L +
Sbjct: 56 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 115
Query: 136 SLRVRK----------------KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
L+ R+ +LS + AY+V +G++YL + IH D+ N+L+
Sbjct: 116 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 175
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + +M+PE + +
Sbjct: 176 TEDNVMKIADFGLARDIHHIDYYKKTTN------GRLPV------KWMAPEAL----FDR 219
Query: 240 DYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRR 298
Y DVWS GV++ E +G P G + L + G R++ P + E
Sbjct: 220 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEELFKLLKEGHRMDKPSNCTNELYM 275
Query: 299 FVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 276 MMRDCWHAVPSQRPTFKQLV 295
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----------------KLSEDVISGVAYRVLKGL 159
T +G + ++E+ +G+L + L+ R+ +LS + AY+V +G+
Sbjct: 89 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGM 148
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 149 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN------GRLPV- 201
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALIC 278
+M+PE + + Y DVWS GV++ E +G P G + L
Sbjct: 202 -----KWMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEELFK 248
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 249 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 288
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 37/260 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L + ++ E E++K + + T +G + ++E+ +G+L +
Sbjct: 53 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 112
Query: 136 SLRVRK----------------KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
L+ R+ +LS + AY+V +G++YL + IH D+ N+L+
Sbjct: 113 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 172
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + +M+PE + +
Sbjct: 173 TEDNVMKIADFGLARDIHHIDYYKKTTN------GRLPV------KWMAPEAL----FDR 216
Query: 240 DYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRR 298
Y DVWS GV++ E +G P G + L + G R++ P + E
Sbjct: 217 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEELFKLLKEGHRMDKPSNCTNELYM 272
Query: 299 FVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 273 MMRDCWHAVPSQRPTFKQLV 292
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 37/260 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L + ++ E E++K + + T +G + ++E+ +G+L +
Sbjct: 105 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 164
Query: 136 SLRVRK----------------KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
L+ R+ +LS + AY+V +G++YL + IH D+ N+L+
Sbjct: 165 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 224
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + +M+PE + +
Sbjct: 225 TEDNVMKIADFGLARDIHHIDYYKKTTN------GRLPV------KWMAPEAL----FDR 268
Query: 240 DYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRR 298
Y DVWS GV++ E +G P G + L + G R++ P + E
Sbjct: 269 IYTHQSDVWSFGVLLWEIFTLGGSPYPGV----PVEELFKLLKEGHRMDKPSNCTNELYM 324
Query: 299 FVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 325 MMRDCWHAVPSQRPTFKQLV 344
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 37/260 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L + ++ E E++K + + T +G + ++E+ +G+L +
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 136 SLRVRK----------------KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
L+ R+ +LS + AY+V +G++YL + IH D+ N+L+
Sbjct: 124 YLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 183
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + +M+PE + +
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTN------GRLPV------KWMAPEAL----FDR 227
Query: 240 DYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRR 298
Y DVWS GV++ E +G P G + L + G R++ P + E
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEELFKLLKEGHRMDKPSNCTNELYM 283
Query: 299 FVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 284 MMRDCWHAVPSQRPTFKQLV 303
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/260 (23%), Positives = 111/260 (42%), Gaps = 37/260 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L + ++ E E++K + + T +G + ++E+ +G+L +
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 136 SLRVRK----------------KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
L+ R+ +LS + AY+V +G++YL + IH D+ N+L+
Sbjct: 124 YLQARRPPGLEFSFNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 183
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + +M+PE + +
Sbjct: 184 TEDNVMKIADFGLARDIHHIDXXKKTTN------GRLPV------KWMAPEAL----FDR 227
Query: 240 DYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRR 298
Y DVWS GV++ E +G P G + L + G R++ P + E
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEELFKLLKEGHRMDKPSNCTNELYM 283
Query: 299 FVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 284 MMRDCWHAVPSQRPTFKQLV 303
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 37/260 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L + ++ E E++K + + T +G + ++E+ +G+L +
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 136 SLRVRK----------------KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
L+ R+ +LS + AY+V +G++YL + IH D+ N+L+
Sbjct: 124 YLQARRPPGLEYCYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 183
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + +M+PE + +
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTN------GRLPV------KWMAPEAL----FDR 227
Query: 240 DYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRR 298
Y DVWS GV++ E +G P G + L + G R++ P + E
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEELFKLLKEGHRMDKPSNCTNELYM 283
Query: 299 FVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 284 MMRDCWHAVPSQRPTFKQLV 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/220 (23%), Positives = 94/220 (42%), Gaps = 37/220 (16%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----------------KLSEDVISGVAYRVLKGL 159
T +G + ++E+ +G+L + L+ R+ +LS + AY+V +G+
Sbjct: 97 TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGM 156
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 157 EYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTN------GRLPV- 209
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALIC 278
+M+PE + + Y DVWS GV++ E +G P G + L
Sbjct: 210 -----KWMAPEAL----FDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEELFK 256
Query: 279 AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 257 LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLV 296
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/221 (23%), Positives = 92/221 (41%), Gaps = 32/221 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSI--YALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
+G G G VYK + + YALK + T I A E +L+ L ++
Sbjct: 29 VGRGTYGHVYKAKRKDGKDDKDYALKQIEGTG---ISMSACREIALLRELKHPNVISLQK 85
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRK---------KLSEDVISGVAYRVLKGLQYLH 163
VF + +++ L+ ++ + +L ++ + Y++L G+ YLH
Sbjct: 86 VFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLH 145
Query: 164 GMQIIHGDIKPSNLLING----KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
++H D+KP+N+L+ G +G VKIAD G +R+
Sbjct: 146 ANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLD-----------P 194
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
+ T Y +PE + R Y A D+W++G + E L
Sbjct: 195 VVVTFWYRAPELLLGAR---HYTKAIDIWAIGCIFAELLTS 232
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 42/305 (13%)
Query: 33 FPTSNPTSPDVENISDLKKLTVL---GHGNGGIVYK-----VRHQKSNSIYALKVLNTTS 84
FP+S PD +S +K+T+L G G+ G+VY+ + ++ + A+K +N ++
Sbjct: 2 FPSSV-YVPDEWEVSR-EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 59
Query: 85 STIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLS 144
S R + +EA ++K +V+ V + + VME M G L LR + +
Sbjct: 60 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-VMELMAHGDLKSYLRSLRPEA 118
Query: 145 ED----------VISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
E+ + +A + G+ YL+ + +H ++ N ++ VKI DFG++R
Sbjct: 119 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 178
Query: 195 IVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVV 254
+ ET G+ + +M+PE + G + + D+WS GVV+
Sbjct: 179 DIYETDYYRKG--------GKGLLP----VRWMAPESLKD----GVFTTSSDMWSFGVVL 222
Query: 255 LECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGT 313
E + P G + ++ + G L+ P+ +R C + + R T
Sbjct: 223 WEITSLAEQPYQGLSNE----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPT 278
Query: 314 VEELL 318
E++
Sbjct: 279 FLEIV 283
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 70/305 (22%), Positives = 132/305 (43%), Gaps = 42/305 (13%)
Query: 33 FPTSNPTSPDVENISDLKKLTVL---GHGNGGIVYK-----VRHQKSNSIYALKVLNTTS 84
FP+S PD +S +K+T+L G G+ G+VY+ + ++ + A+K +N ++
Sbjct: 3 FPSSV-YVPDEWEVSR-EKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESA 60
Query: 85 STIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLS 144
S R + +EA ++K +V+ V + + VME M G L LR + +
Sbjct: 61 SLRERIEFLNEASVMKGFTCHHVVRLLGVVSKGQPTLV-VMELMAHGDLKSYLRSLRPEA 119
Query: 145 ED----------VISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
E+ + +A + G+ YL+ + +H ++ N ++ VKI DFG++R
Sbjct: 120 ENNPGRPPPTLQEMIQMAAEIADGMAYLNAKKFVHRNLAARNCMVAHDFTVKIGDFGMTR 179
Query: 195 IVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVV 254
+ ET G+ + +M+PE + G + + D+WS GVV+
Sbjct: 180 DIYETDYYRKG--------GKGLLP----VRWMAPESLKD----GVFTTSSDMWSFGVVL 223
Query: 255 LECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGT 313
E + P G + ++ + G L+ P+ +R C + + R T
Sbjct: 224 WEITSLAEQPYQGLSNE----QVLKFVMDGGYLDQPDNCPERVTDLMRMCWQFNPNMRPT 279
Query: 314 VEELL 318
E++
Sbjct: 280 FLEIV 284
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 108/253 (42%), Gaps = 24/253 (9%)
Query: 27 RRRRHHF--PTSNPTSPDVE-NISDLKKLT-VLGHGNGGIVYKVRHQKSNSIYALK-VLN 81
+R++HH PT++ P + I D ++ ++G G+ G V + + + A+K +L
Sbjct: 29 QRKQHHSSKPTASMPRPHSDWQIPDRYEIRHLIGTGSYGHVCEAYDKLEKRVVAIKKILR 88
Query: 82 TTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEI---CFVMEHMERGSLFDSLR 138
I + E IL RL+ +VK + + E +V+ + R
Sbjct: 89 VFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFR 148
Query: 139 VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVE- 197
L+E I + Y +L G++Y+H I+H D+KP+N L+N VK+ DFG++R V+
Sbjct: 149 TPVYLTELHIKTLLYNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDY 208
Query: 198 ------------ETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAG 245
+ + T Y +PE + + +Y A
Sbjct: 209 PENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYRAPELILLQE---NYTEAI 265
Query: 246 DVWSLGVVVLECL 258
DVWS+G + E L
Sbjct: 266 DVWSIGCIFAELL 278
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/260 (22%), Positives = 109/260 (41%), Gaps = 37/260 (14%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L + ++ E E++K + + T +G + ++E+ +G+L +
Sbjct: 64 AVKMLKSDATEKDLSDLISEMEMMKMIGKHKNIINLLGACTQDGPLYVIVEYASKGNLRE 123
Query: 136 SLRVRK----------------KLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
L+ R+ +LS + AY+V +G++YL + IH D+ N+L+
Sbjct: 124 YLQAREPPGLEYSYNPSHNPEEQLSSKDLVSCAYQVARGMEYLASKKCIHRDLAARNVLV 183
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + +M+PE + +
Sbjct: 184 TEDNVMKIADFGLARDIHHIDYYKKTTN------GRLPV------KWMAPEAL----FDR 227
Query: 240 DYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRR 298
Y DVWS GV++ E +G P G + L + G R++ P + E
Sbjct: 228 IYTHQSDVWSFGVLLWEIFTLGGSPYPGVP----VEELFKLLKEGHRMDKPSNCTNELYM 283
Query: 299 FVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 284 MMRDCWHAVPSQRPTFKQLV 303
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 42 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 101
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG+++L + +
Sbjct: 102 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFV 160
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 161 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----------HNKTGAKLPVKWMA 210
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 211 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 261
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 262 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 294
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG+++L + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFV 155
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----------HNKTGAKLPVKWMA 205
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 206 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 256
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 257 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG+++L + +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFV 156
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----------HNKTGAKLPVKWMA 206
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 207 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 257
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 258 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 35 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 94
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG+++L + +
Sbjct: 95 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFV 153
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 154 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----------HNKTGAKLPVKWMA 203
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 204 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 254
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 255 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 287
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 96 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 155
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG+++L + +
Sbjct: 156 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFV 214
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 215 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKL----------PVKWMA 264
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 265 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 315
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 316 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 348
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 37 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 96
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG+++L + +
Sbjct: 97 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFV 155
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 156 HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSV----------HNKTGAKLPVKWMA 205
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 206 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 256
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 257 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 289
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 104/264 (39%), Gaps = 29/264 (10%)
Query: 48 DLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKR 101
DL+ L LG G+ G+V + K+ S+ A+K L + S E +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
LD + +++ + V T ++ V E GSL D LR + +S A +V +G+
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM--VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL + IH D+ NLL+ + VKI DFG+ R + +
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF------- 178
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICA 279
A+ +PE + + + A D W GV + E G P IG L +
Sbjct: 179 ----AWCAPESLKTRT----FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 230
Query: 280 ICFGERLEMPETASPEFRRFVRSC 303
GERL PE + + C
Sbjct: 231 ---GERLPRPEDCPQDIYNVMVQC 251
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 29/264 (10%)
Query: 48 DLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKR 101
DL+ L LG G+ G+V + K+ S+ A+K L + S E +
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
LD + +++ + V T + V E GSL D LR + +S A +V +G+
Sbjct: 72 LDHRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL + IH D+ NLL+ + VKI DFG+ R + +
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF------- 182
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICA 279
A+ +PE + + + A D W GV + E G P IG L +
Sbjct: 183 ----AWCAPESLKTRT----FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 234
Query: 280 ICFGERLEMPETASPEFRRFVRSC 303
GERL PE + + C
Sbjct: 235 ---GERLPRPEDCPQDIYNVMVQC 255
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 29/264 (10%)
Query: 48 DLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKR 101
DL+ L LG G+ G+V + K+ S+ A+K L + S E +
Sbjct: 13 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHS 71
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
LD + +++ + V T + V E GSL D LR + +S A +V +G+
Sbjct: 72 LDHRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 129
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL + IH D+ NLL+ + VKI DFG+ R + +
Sbjct: 130 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF------- 182
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICA 279
A+ +PE + + + A D W GV + E G P IG L +
Sbjct: 183 ----AWCAPESLKTRT----FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 234
Query: 280 ICFGERLEMPETASPEFRRFVRSC 303
GERL PE + + C
Sbjct: 235 ---GERLPRPEDCPQDIYNVMVQC 255
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 104/264 (39%), Gaps = 29/264 (10%)
Query: 48 DLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKR 101
DL+ L LG G+ G+V + K+ S+ A+K L + S E +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
LD + +++ + V T + V E GSL D LR + +S A +V +G+
Sbjct: 68 LDHRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL + IH D+ NLL+ + VKI DFG+ R + +
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF------- 178
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICA 279
A+ +PE + + + A D W GV + E G P IG L +
Sbjct: 179 ----AWCAPESLKTRT----FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 230
Query: 280 ICFGERLEMPETASPEFRRFVRSC 303
GERL PE + + C
Sbjct: 231 ---GERLPRPEDCPQDIYNVMVQC 251
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/273 (22%), Positives = 109/273 (39%), Gaps = 27/273 (9%)
Query: 54 VLGHGNGGIVY--KVRHQKSNSIY-ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKC 110
V+G G+ G VY + I+ A+K LN + Q E I+K ++
Sbjct: 38 VIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSL 97
Query: 111 HAVFYTIEGEICFVMEHMERGSLFDSLR--VRKKLSEDVISGVAYRVLKGLQYLHGMQII 168
+ EG V+ +M+ G L + +R +D+I G +V KG+++L + +
Sbjct: 98 LGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLI-GFGLQVAKGMKFLASKKFV 156
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMS 228
H D+ N +++ K VK+ADFG++R + + +M+
Sbjct: 157 HRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSV----------HNKTGAKLPVKWMA 206
Query: 229 PERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICF--GERL 286
E + +++ + DVWS GV++ E + P PD+ + G RL
Sbjct: 207 LESLQTQK----FTTKSDVWSFGVLLWELMTRGAP-----PYPDVNTFDITVYLLQGRRL 257
Query: 287 EMPETASPEFRRFVRSCLEKDWRKRGTVEELLA 319
PE + C R + EL++
Sbjct: 258 LQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVS 290
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 103/264 (39%), Gaps = 29/264 (10%)
Query: 48 DLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKR 101
DL+ L LG G+ G+V + K+ S+ A+K L + S E +
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
LD + +++ + V T + V E GSL D LR + +S A +V +G+
Sbjct: 78 LDHRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL + IH D+ NLL+ + VKI DFG+ R + +
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF------- 188
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICA 279
A+ +PE + + + A D W GV + E G P IG L +
Sbjct: 189 ----AWCAPESLKTRT----FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 240
Query: 280 ICFGERLEMPETASPEFRRFVRSC 303
GERL PE + + C
Sbjct: 241 ---GERLPRPEDCPQDIYNVMVQC 261
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 67/264 (25%), Positives = 104/264 (39%), Gaps = 29/264 (10%)
Query: 48 DLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKR 101
DL+ L LG G+ G+V + K+ S+ A+K L + S E +
Sbjct: 9 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHS 67
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
LD + +++ + V T ++ V E GSL D LR + +S A +V +G+
Sbjct: 68 LDHRNLIRLYGVVLTPPMKM--VTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 125
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL + IH D+ NLL+ + VKI DFG+ R + +
Sbjct: 126 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPF------- 178
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICA 279
A+ +PE + + + A D W GV + E G P IG L +
Sbjct: 179 ----AWCAPESLKTRT----FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 230
Query: 280 ICFGERLEMPETASPEFRRFVRSC 303
GERL PE + + C
Sbjct: 231 ---GERLPRPEDCPQDIYNVMVQC 251
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/217 (23%), Positives = 96/217 (44%), Gaps = 36/217 (16%)
Query: 119 GEICFVMEHMERGSLFDSLRVR-------KKLSEDVIS-----GVAYRVLKGLQYLHGMQ 166
G + ++E + G+L LR + K L +D ++ +++V KG+++L +
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVAKGMEFLASRK 164
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D+ N+L++ K VKI DFG++R + + G+A + +
Sbjct: 165 XIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRK--------GDARLP----LKW 212
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFGEKPDLMALICAICFG 283
M+PE + + Y DVWS GV++ E YP + E+ + G
Sbjct: 213 MAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE-----FXRRLKEG 263
Query: 284 ERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
R+ P+ +PE + + C + +R T EL+ +
Sbjct: 264 TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 104/264 (39%), Gaps = 29/264 (10%)
Query: 48 DLKKLTVLGHGNGGIV----YKVRHQKSNSIYALKVL--NTTSSTIIRHQAAHEAEILKR 101
DL+ L LG G+ G+V + K+ S+ A+K L + S E +
Sbjct: 19 DLRLLEKLGDGSFGVVRRGEWDAPSGKTVSV-AVKCLKPDVLSQPEAMDDFIREVNAMHS 77
Query: 102 LDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLSEDVISGVAYRVLKGLQ 160
LD + +++ + V T + V E GSL D LR + +S A +V +G+
Sbjct: 78 LDHRNLIRLYGVVLT--PPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYAVQVAEGMG 135
Query: 161 YLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIAC 220
YL + IH D+ NLL+ + VKI DFG+ R + +
Sbjct: 136 YLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPF------- 188
Query: 221 MGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV-GHYPLIGFGEKPDLMALICA 279
A+ +PE + + + A D W GV + E G P IG L +
Sbjct: 189 ----AWCAPESLKTRT----FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKE 240
Query: 280 ICFGERLEMPETASPEFRRFVRSC 303
GERL PE + + C
Sbjct: 241 ---GERLPRPEDCPQDIYNVMVQC 261
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 157 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 216
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 217 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN------GRLPV- 269
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
+M+PE + + Y DVWS GV++ E YP I E L
Sbjct: 270 -----KWMAPEAL----FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 314
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 315 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 356
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 97/218 (44%), Gaps = 38/218 (17%)
Query: 119 GEICFVMEHMERGSLFDSLRVR-------KKLSEDVIS-----GVAYRVLKGLQYLHGMQ 166
G + ++E + G+L LR + K L +D ++ +++V KG+++L +
Sbjct: 105 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVAKGMEFLASRK 164
Query: 167 IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAY 226
IH D+ N+L++ K VKI DFG++R + + G+A + +
Sbjct: 165 XIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK--------GDARLP----LKW 212
Query: 227 MSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFGEKPDLMALIC-AICF 282
M+PE + + Y DVWS GV++ E YP + E+ C +
Sbjct: 213 MAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRRLKE 262
Query: 283 GERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 263 GTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 300
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 97/221 (43%), Gaps = 41/221 (18%)
Query: 119 GEICFVMEHMERGSLFDSLRVRK------KLSEDVISGV---------AYRVLKGLQYLH 163
G + ++E + G+L LR ++ K ED+ +++V KG+++L
Sbjct: 106 GPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSFQVAKGMEFLA 165
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
+ IH D+ N+L++ K VKI DFG++R + + G+A +
Sbjct: 166 SRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK--------GDARLP---- 213
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFGEKPDLMALIC-A 279
+M+PE + + Y DVWS GV++ E YP + E+ C
Sbjct: 214 LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEE------FCRR 263
Query: 280 ICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
+ G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 264 LKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/218 (22%), Positives = 90/218 (41%), Gaps = 31/218 (14%)
Query: 107 IVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQ 166
+++ F T EG + + + LFD + + L E +V+ +Q+ H
Sbjct: 100 VIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGPSRCFFGQVVAAIQHCHSRG 159
Query: 167 IIHGDIKPSNLLIN-GKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
++H DIK N+LI+ +G K+ DFG ++ + E GT
Sbjct: 160 VVHRDIKDENILIDLRRGCAKLIDFGSGALLHD----------------EPYTDFDGTRV 203
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGER 285
Y PE + ++ + VWSLG+++ + + G P F +++
Sbjct: 204 YSPPEWISRHQY---HALPATVWSLGILLYDMVCGDIP---FERDQEILE--------AE 249
Query: 286 LEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFV 323
L P SP+ +R CL R ++EE+L P++
Sbjct: 250 LHFPAHVSPDCCALIRRCLAPKPSSRPSLEEILLDPWM 287
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 105/262 (40%), Gaps = 41/262 (15%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L ++ E E++K + + T +G + ++E+ +G+L +
Sbjct: 71 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIITLLGACTQDGPLYVIVEYASKGNLRE 130
Query: 136 SLRVRK----KLSEDV------------ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
LR R+ + S D+ + Y++ +G++YL + IH D+ N+L+
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + M A +RV
Sbjct: 191 TENNVMKIADFGLARDINNIDYYKKTTN------GRLPVKWMAPEALF--DRV------- 235
Query: 240 DYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMALICAICFGERLEMPETASPEF 296
Y DVWS GV++ E YP I E L + G R++ P + E
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFKLLKEGHRMDKPANCTNEL 288
Query: 297 RRFVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 74/300 (24%), Positives = 122/300 (40%), Gaps = 68/300 (22%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALK-VLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
LG G+ GIV +V +S +ALK VL R++ E +I+K LD I+K
Sbjct: 14 TLGTGSFGIVCEVFDIESGKRFALKKVLQDP-----RYKN-RELDIMKVLDHVNIIKLVD 67
Query: 113 VFYTIEGE-------------------------------------ICFVMEHME---RGS 132
FYT E + +ME++
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVPDTLHKV 127
Query: 133 LFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGE-VKIADFG 191
L +R + + ++IS Y++ + + ++H + I H DIKP NLL+N K +K+ DFG
Sbjct: 128 LKSFIRSGRSIPMNLISIYIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLKLCDFG 187
Query: 192 VSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLG 251
++ + + E ++A + + Y +PE + +Y + D+WS+G
Sbjct: 188 SAKKLIPS---------------EPSVAXICSRFYRAPELM---LGATEYTPSIDLWSIG 229
Query: 252 VVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLE-KDWRK 310
V E ++G PL D + I I E +P + L+ KDWRK
Sbjct: 230 CVFGELILGK-PLFSGETSIDQLVRIIQIMGTPTKEQMIRMNPHYTEVRFPTLKAKDWRK 288
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN------GRLPVK 224
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
M A +RV Y DVWS GV++ E YP I E L
Sbjct: 225 WMAPEALF--DRV--------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 268
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 154 SFQVAKGMEFLASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK------ 207
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 208 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 258 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN------GRLPVK 224
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
M A +RV Y DVWS GV++ E YP I E L
Sbjct: 225 WMAPEALF--DRV--------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 268
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNTTN------GRLPVK 224
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
M A +RV Y DVWS GV++ E YP I E L
Sbjct: 225 WMAPEALF--DRV--------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 268
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 98 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 157
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 158 EYLASQKCIHRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKTTN------GRLPV- 210
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
+M+PE + + Y DVWS GV++ E YP I E L
Sbjct: 211 -----KWMAPEAL----FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 255
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 256 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 297
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/222 (24%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTN------GRLPVK 224
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
M A +RV Y DVWS GV++ E YP I E L
Sbjct: 225 WMAPEALF--DRV--------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 268
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 93/222 (41%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 103 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 162
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 163 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN------GRLPV- 215
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
+M+PE + + Y DVWS GV++ E YP I E L
Sbjct: 216 -----KWMAPEAL----FDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 260
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 261 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 302
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK------ 207
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 208 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 258 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN------GRLPVK 224
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
M A +RV Y DVWS GV++ E YP I E L
Sbjct: 225 WMAPEALF--DRV--------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 268
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 100 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 159
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 160 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN------GRLPVK 213
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
M A +RV Y DVWS GV++ E YP I E L
Sbjct: 214 WMAPEALF--DRV--------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 257
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 258 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 299
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 57.8 bits (138), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK------ 198
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 199 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 249 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRK------ 198
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 199 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 249 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 198
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 199 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 249 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRK------ 207
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 208 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 258 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 154 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 207
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 208 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 257
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 258 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 304
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 145 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 198
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 199 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 248
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 249 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 295
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 156 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 209
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 210 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 259
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 260 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 306
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 97/217 (44%), Gaps = 28/217 (12%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV A+K L+ + A+ E ++K ++ + I+
Sbjct: 27 QNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNII 86
Query: 109 KCHAVFYTIEG-----EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF + ++ VME M+ S ++ +L + +S + Y++L G+++LH
Sbjct: 87 GLLNVFTPQKSLEEFQDVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLVGIKHLH 143
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KPSN+++ +KI DFG++R + + T
Sbjct: 144 SAGIIHRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMT---------------PYVVT 188
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
Y +PE + G Y D+WS+GV++ E + G
Sbjct: 189 RYYRAPEVI----LGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 204 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 257
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 258 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 307
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 308 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 354
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 199 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 252
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 253 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 302
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 303 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 349
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 191 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 244
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 245 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 294
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 295 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 341
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 91/222 (40%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++E+ +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 111 TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ ++IADFG++R + G +
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKTTN------GRLPVK 224
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
M A +RV Y DVWS GV++ E YP I E L
Sbjct: 225 WMAPEALF--DRV--------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 268
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 206 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 259
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 260 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 309
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 310 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 356
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 26/173 (15%)
Query: 152 AYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
+++V KG+++L + IH D+ N+L++ K VKI DFG++R + +
Sbjct: 197 SFQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRK------ 250
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL---VGHYPLIGFG 268
G+A + +M+PE + + Y DVWS GV++ E YP +
Sbjct: 251 --GDARLP----LKWMAPETI----FDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKID 300
Query: 269 EKPDLMALIC-AICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAY 320
E+ C + G R+ P+ +PE + + C + +R T EL+ +
Sbjct: 301 EE------FCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEH 347
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 69/141 (48%), Gaps = 22/141 (15%)
Query: 120 EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
++ VME M+ S ++ +L + +S + Y++L G+++LH IIH D+KPSN+++
Sbjct: 103 DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KI DFG++R + + T Y +PE + G
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMT---------------PYVVTRYYRAPEVI----LGM 200
Query: 240 DYGFAGDVWSLGVVVLECLVG 260
Y D+WS+GV++ E + G
Sbjct: 201 GYKENVDIWSVGVIMGEMIKG 221
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/266 (22%), Positives = 109/266 (40%), Gaps = 26/266 (9%)
Query: 40 SPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTT-SSTIIRHQAAHEAEI 98
+P +I +++T LG G G VYK +N A+K + + A E +
Sbjct: 27 APSATSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSL 86
Query: 99 LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKG 158
LK L + I++ +V + + + E+ E L + +S VI Y+++ G
Sbjct: 87 LKELQHRNIIELKSVIHH-NHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIKSFLYQLING 144
Query: 159 LQYLHGMQIIHGDIKPSNLLINGKGE-----VKIADFGVSRIVEETRXXXXXXXXXXXXI 213
+ + H + +H D+KP NLL++ +KI DFG++R I
Sbjct: 145 VNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLAR-------------AFGIPI 191
Query: 214 GEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDL 273
+ + T Y PE + R Y + D+WS+ + E L+ G E L
Sbjct: 192 RQFTHEII-TLWYRPPEILLGSR---HYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQL 247
Query: 274 MALICAICFGERLEMPE-TASPEFRR 298
+ + + P TA P++++
Sbjct: 248 FKIFEVLGLPDDTTWPGVTALPDWKQ 273
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 51/279 (18%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ------F 106
+++G G+ G V K + A+K++ + + +QA E +L+ ++ +
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL--NQAQIEVRLLELMNKHDTEMKYY 117
Query: 107 IV--KCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYL 162
IV K H +F +C V E M +L+D LR + +S ++ A ++ L +L
Sbjct: 118 IVHLKRHFMF---RNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 163 HG--MQIIHGDIKPSNLLING--KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ IIH D+KP N+L+ + +KI DFG S +G+
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS-----------------CQLGQRIY 216
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
+ + Y SPE + G Y A D+WSLG +++E G PL + D M I
Sbjct: 217 QXIQSRFYRSPEVL----LGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIV 271
Query: 279 AICFGERLEMPET----ASPEFRRFVRSCLEKDWRKRGT 313
E L +P +P+ R+F + W + T
Sbjct: 272 -----EVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKT 305
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 115/285 (40%), Gaps = 44/285 (15%)
Query: 52 LTVLGHGNGGIVYKVRHQKSNSIYALKVLN---TTSSTIIRH----QAAHEAEILKRLDS 104
++ LG G G V+ ++ N +K + I + E IL R++
Sbjct: 29 MSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILSRVEH 88
Query: 105 QFIVKCHAVFYTIEGEICFVMEHMERG-SLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
I+K +F +G VME G LF + +L E + S + +++ + YL
Sbjct: 89 ANIIKVLDIFEN-QGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIFRQLVSAVGYLR 147
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH DIK N++I +K+ DFG + +E G+ GT
Sbjct: 148 LKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLER---------------GKLFYTFCGT 192
Query: 224 CAYMSPERVDSERWGGDY-GFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI-- 280
Y +PE + G Y G ++WSLGV + Y L+ F E P C +
Sbjct: 193 IEYCAPEVL----MGNPYRGPELEMWSLGVTL-------YTLV-FEENP-----FCELEE 235
Query: 281 CFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELLAYPFVTK 325
+ P S E V L+ +R T+E+L+ P+VT+
Sbjct: 236 TVEAAIHPPYLVSKELMSLVSGLLQPVPERRTTLEKLVTDPWVTQ 280
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 51/279 (18%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ------F 106
+++G G+ G V K + A+K++ + + +QA E +L+ ++ +
Sbjct: 41 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL--NQAQIEVRLLELMNKHDTEMKYY 98
Query: 107 IV--KCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYL 162
IV K H +F +C V E M +L+D LR + +S ++ A ++ L +L
Sbjct: 99 IVHLKRHFMF---RNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 154
Query: 163 HG--MQIIHGDIKPSNLLING--KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ IIH D+KP N+L+ + +KI DFG S +G+
Sbjct: 155 ATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSS-----------------CQLGQRIY 197
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
+ + Y SPE + G Y A D+WSLG +++E G PL + D M I
Sbjct: 198 QXIQSRFYRSPEVL----LGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIV 252
Query: 279 AICFGERLEMPET----ASPEFRRFVRSCLEKDWRKRGT 313
E L +P +P+ R+F + W + T
Sbjct: 253 -----EVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKT 286
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 119/279 (42%), Gaps = 51/279 (18%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ------F 106
+++G G+ G V K + A+K++ + + +QA E +L+ ++ +
Sbjct: 60 SLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFL--NQAQIEVRLLELMNKHDTEMKYY 117
Query: 107 IV--KCHAVFYTIEGEICFVMEHMERGSLFDSLRVR--KKLSEDVISGVAYRVLKGLQYL 162
IV K H +F +C V E M +L+D LR + +S ++ A ++ L +L
Sbjct: 118 IVHLKRHFMF---RNHLCLVFE-MLSYNLYDLLRNTNFRGVSLNLTRKFAQQMCTALLFL 173
Query: 163 HG--MQIIHGDIKPSNLLING--KGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAI 218
+ IIH D+KP N+L+ + +KI DFG S +G+
Sbjct: 174 ATPELSIIHCDLKPENILLCNPKRXAIKIVDFGSS-----------------CQLGQRIY 216
Query: 219 ACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALIC 278
+ + Y SPE + G Y A D+WSLG +++E G PL + D M I
Sbjct: 217 QXIQSRFYRSPEVL----LGMPYDLAIDMWSLGCILVEMHTGE-PLFSGANEVDQMNKIV 271
Query: 279 AICFGERLEMPET----ASPEFRRFVRSCLEKDWRKRGT 313
E L +P +P+ R+F + W + T
Sbjct: 272 -----EVLGIPPAHILDQAPKARKFFEKLPDGTWNLKKT 305
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 128/310 (41%), Gaps = 54/310 (17%)
Query: 32 HFPTSNPT---SPDVENISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIY 75
+F SNP + +ISDLK++ LGHG G VY+ + + S
Sbjct: 19 YFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQV 78
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFV-MEHMERGSLF 134
A+K L S EA I+ + + Q IV+C V +++ F+ ME M G L
Sbjct: 79 AVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGV--SLQSLPRFILMELMAGGDLK 136
Query: 135 DSLR-VRKKLSE-------DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGE 184
LR R + S+ D++ VA + G QYL IH DI N L+ G G
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 185 V-KIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYG 242
V KI DFG++R I A+ G CA + + + E + G +
Sbjct: 196 VAKIGDFGMAR-----------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 238
Query: 243 FAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVR 301
D WS GV++ E +G+ P + +++ + + G R++ P+ R +
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMT 294
Query: 302 SCLEKDWRKR 311
C + R
Sbjct: 295 QCWQHQPEDR 304
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/222 (23%), Positives = 90/222 (40%), Gaps = 41/222 (18%)
Query: 116 TIEGEICFVMEHMERGSLFDSLRVRK----KLSEDV------------ISGVAYRVLKGL 159
T +G + ++ + +G+L + LR R+ + S D+ + Y++ +G+
Sbjct: 111 TQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGM 170
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
+YL + IH D+ N+L+ +KIADFG++R + G +
Sbjct: 171 EYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTN------GRLPVK 224
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMAL 276
M A +RV Y DVWS GV++ E YP I E L
Sbjct: 225 WMAPEALF--DRV--------YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------L 268
Query: 277 ICAICFGERLEMPETASPEFRRFVRSCLEKDWRKRGTVEELL 318
+ G R++ P + E +R C +R T ++L+
Sbjct: 269 FKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLV 310
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 82/310 (26%), Positives = 129/310 (41%), Gaps = 54/310 (17%)
Query: 32 HFPTSNPT---SPDVENISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIY 75
+F SNP + +ISDLK++ LGHG G VY+ + + S
Sbjct: 19 YFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQV 78
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLF 134
A+K L S EA I+ +L+ Q IV+C V +++ F++ E M G L
Sbjct: 79 AVKTLPEVCSEQDELDFLMEALIISKLNHQNIVRCIGV--SLQSLPRFILLELMAGGDLK 136
Query: 135 DSLR-VRKKLSE-------DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGE 184
LR R + S+ D++ VA + G QYL IH DI N L+ G G
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 185 V-KIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYG 242
V KI DFG++R I A+ G CA + + + E + G +
Sbjct: 196 VAKIGDFGMAR-----------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 238
Query: 243 FAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVR 301
D WS GV++ E +G+ P + +++ + + G R++ P+ R +
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMT 294
Query: 302 SCLEKDWRKR 311
C + R
Sbjct: 295 QCWQHQPEDR 304
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 72/153 (47%), Gaps = 23/153 (15%)
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVL----KGLQYLHGMQII 168
V+ I+ ++C + +L D + R L ED GV + + +++LH ++
Sbjct: 134 VYLYIQMQLC------RKENLKDWMNRRCSL-EDREHGVCLHIFIQIAEAVEFLHSKGLM 186
Query: 169 HGDIKPSNLLINGKGEVKIADFGVSRIV---EETRXXXXXXXXXXXXIGEAAIACMGTCA 225
H D+KPSN+ VK+ DFG+ + EE + G+ +GT
Sbjct: 187 HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHXGQ-----VGTKL 241
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
YMSPE++ G +Y D++SLG+++ E L
Sbjct: 242 YMSPEQIH----GNNYSHKVDIFSLGLILFELL 270
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 35/64 (54%)
Query: 46 ISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
++D + + +G G G+V++ +++ + YA+K + + + R + E + L +L+
Sbjct: 5 LTDFEPIQCMGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHP 64
Query: 106 FIVK 109
IV+
Sbjct: 65 GIVR 68
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 84/340 (24%), Positives = 138/340 (40%), Gaps = 56/340 (16%)
Query: 4 VRERRHQQALTLSLPATAANHQFRRRRHH--FPTSNPT---SPDVENISDLKKLTV---- 54
V R+HQ+ + + + ++ + R NP + +ISDLK++
Sbjct: 1 VYRRKHQELQAMQMELQSPEYKLSKLRTSTIMTDYNPNYSFAGKTSSISDLKEVPRKNIT 60
Query: 55 ----LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQ 105
LGHG G VY+ + + S A+K L S EA I+ + + Q
Sbjct: 61 LIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQ 120
Query: 106 FIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE-------DVISGVAYRVL 156
IV+C V +++ F++ E M G L LR R + S+ D++ VA +
Sbjct: 121 NIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH-VARDIA 177
Query: 157 KGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEETRXXXXXXXXXXXXI 213
G QYL IH DI N L+ G G V KI DFG++R I
Sbjct: 178 CGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR-----------------DI 220
Query: 214 GEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL-VGHYPLIGFGEKP 271
A+ G CA + + + E + G + D WS GV++ E +G+ P +
Sbjct: 221 YRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQ- 279
Query: 272 DLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+++ + + G R++ P+ R + C + R
Sbjct: 280 EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/262 (22%), Positives = 104/262 (39%), Gaps = 41/262 (15%)
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFD 135
A+K+L ++ E E++K + + T +G + ++ + +G+L +
Sbjct: 71 AVKMLKDDATEKDLSDLVSEMEMMKMIGKHKNIINLLGACTQDGPLYVIVGYASKGNLRE 130
Query: 136 SLRVRK----KLSEDV------------ISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
LR R+ + S D+ + Y++ +G++YL + IH D+ N+L+
Sbjct: 131 YLRARRPPGMEYSYDINRVPEEQMTFKDLVSCTYQLARGMEYLASQKCIHRDLAARNVLV 190
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KIADFG++R + G + M A +RV
Sbjct: 191 TENNVMKIADFGLARDINNIDYYKKTTN------GRLPVKWMAPEALF--DRV------- 235
Query: 240 DYGFAGDVWSLGVVVLECLV---GHYPLIGFGEKPDLMALICAICFGERLEMPETASPEF 296
Y DVWS GV++ E YP I E L + G R++ P + E
Sbjct: 236 -YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE------LFKLLKEGHRMDKPANCTNEL 288
Query: 297 RRFVRSCLEKDWRKRGTVEELL 318
+R C +R T ++L+
Sbjct: 289 YMMMRDCWHAVPSQRPTFKQLV 310
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQM--ELDHERMSYLLYQMLXGIKHLH 143
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KPSN+++ +KI DFG++R + + T
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMT---------------PYVVT 188
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
Y +PE + G Y D+WS+G ++ E +
Sbjct: 189 RYYRAPEVI----LGMGYKENVDIWSVGCIMGEMV 219
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 22/141 (15%)
Query: 120 EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
++ VME M+ S ++ +L + +S + Y++L G+++LH IIH D+KPSN+++
Sbjct: 103 DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNIVV 159
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KI DFG++R + + T Y +PE + G
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMT---------------PYVVTRYYRAPEVI----LGM 200
Query: 240 DYGFAGDVWSLGVVVLECLVG 260
Y D+WS+G ++ E + G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 44/257 (17%)
Query: 45 NISDLKKLTVLGHGNGGIVYK------VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI 98
++S ++ + LG G VYK +++ ++ A+K L + +R + HEA +
Sbjct: 7 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAV-AIKTLKDKAEGPLREEFRHEAML 65
Query: 99 LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE------------- 145
RL +V C T + + + + G L + L +R S+
Sbjct: 66 RARLQHPNVV-CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 124
Query: 146 ----DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRX 201
D + VA ++ G++YL ++H D+ N+L+ K VKI+D G+ R V
Sbjct: 125 LEPPDFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV----- 178
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VG 260
+G + + +M+PE + G + D+WS GVV+ E G
Sbjct: 179 ---YAADYYKLLGNSLL----PIRWMAPEAIMY----GKFSIDSDIWSYGVVLWEVFSYG 227
Query: 261 HYPLIGFGEKPDLMALI 277
P G+ + D++ +I
Sbjct: 228 LQPYCGYSNQ-DVVEMI 243
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 119/285 (41%), Gaps = 42/285 (14%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G V V YALK + R +A EA++ + + I++ A
Sbjct: 37 LGEGGFSYVDLVEGLHDGHFYALKRI-LCHEQQDREEAQREADMHRLFNHPNILRLVAYC 95
Query: 115 YTIEG---EICFVMEHMERGSLFDSL-RVRKK---LSEDVISGVAYRVLKGLQYLHGMQI 167
G E ++ +RG+L++ + R++ K L+ED I + + +GL+ +H
Sbjct: 96 LRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGY 155
Query: 168 IHGDIKPSNLLINGKGEVKIADFGVSRI----VEETRXXXXXXXXXXXXIGEAAIACMGT 223
H D+KP+N+L+ +G+ + D G VE +R AA C T
Sbjct: 156 AHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDW-------AAQRC--T 206
Query: 224 CAYMSPER-------VDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMAL 276
+Y +PE V ER DVWSLG V+ + G P +K D +AL
Sbjct: 207 ISYRAPELFSVQSHCVIDER--------TDVWSLGCVLYAMMFGEGPYDMVFQKGDSVAL 258
Query: 277 ICAICFGERLEMPETA--SPEFRRFVRSCLEKDWRKRGTVEELLA 319
+L +P++ S + + S + D +R + LL+
Sbjct: 259 AVQ----NQLSIPQSPRHSSALWQLLNSMMTVDPHQRPHIPLLLS 299
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 81/310 (26%), Positives = 128/310 (41%), Gaps = 54/310 (17%)
Query: 32 HFPTSNPT---SPDVENISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIY 75
+F SNP + +ISDLK++ LGHG G VY+ + + S
Sbjct: 19 YFQGSNPNYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQV 78
Query: 76 ALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLF 134
A+K L S EA I+ + + Q IV+C V +++ F++ E M G L
Sbjct: 79 AVKTLPEVYSEQDELDFLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLK 136
Query: 135 DSLR-VRKKLSE-------DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGE 184
LR R + S+ D++ VA + G QYL IH DI N L+ G G
Sbjct: 137 SFLRETRPRPSQPSSLAMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGR 195
Query: 185 V-KIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYG 242
V KI DFG++R I A+ G CA + + + E + G +
Sbjct: 196 VAKIGDFGMAR-----------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFT 238
Query: 243 FAGDVWSLGVVVLECL-VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVR 301
D WS GV++ E +G+ P + +++ + + G R++ P+ R +
Sbjct: 239 SKTDTWSFGVLLWEIFSLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMT 294
Query: 302 SCLEKDWRKR 311
C + R
Sbjct: 295 QCWQHQPEDR 304
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 100/231 (43%), Gaps = 27/231 (11%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLN-TTSSTIIRHQAAHEAEILKRLD 103
++ +LK L ++G G G VYK A+KV + I + + +++ +
Sbjct: 11 DLDNLKLLELIGRGRYGAVYK--GSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDN 68
Query: 104 -SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISG--VAYRVLKGLQ 160
++FIV V E VME+ GSL L + + D +S +A+ V +GL
Sbjct: 69 IARFIVGDERVTADGRMEYLLVMEYYPNGSLXKYLSLH---TSDWVSSCRLAHSVTRGLA 125
Query: 161 YLHGM---------QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXX 211
YLH I H D+ N+L+ G I+DFG+S + R
Sbjct: 126 YLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE---- 181
Query: 212 XIGEAAIACMGTCAYMSPERVDSERWGGDYGFA---GDVWSLGVVVLECLV 259
AAI+ +GT YM+PE ++ D A D+++LG++ E +
Sbjct: 182 --DNAAISEVGTIRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFM 230
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 99/233 (42%), Gaps = 28/233 (12%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
+LG G G VYK R ++ A+K L Q E E++ + +++
Sbjct: 44 NILGRGGFGKVYKGR-LADGTLVAVKRLKEERXQGGELQFQTEVEMISMAVHRNLLRLRG 102
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKK----LSEDVISGVAYRVLKGLQYLHGM--- 165
F E V +M GS+ LR R + L +A +GL YLH
Sbjct: 103 -FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 161
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IIH D+K +N+L++ + E + DFG++++++ A GT
Sbjct: 162 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-------------HVXXAVRGTIG 208
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGH--YPLIGFGEKPDLMAL 276
+++PE + + G DV+ GV++LE + G + L D+M L
Sbjct: 209 HIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 257
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/257 (22%), Positives = 108/257 (42%), Gaps = 44/257 (17%)
Query: 45 NISDLKKLTVLGHGNGGIVYK------VRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEI 98
++S ++ + LG G VYK +++ ++ A+K L + +R + HEA +
Sbjct: 24 SLSAVRFMEELGEDRFGKVYKGHLFGPAPGEQTQAV-AIKTLKDKAEGPLREEFRHEAML 82
Query: 99 LKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSE------------- 145
RL +V C T + + + + G L + L +R S+
Sbjct: 83 RARLQHPNVV-CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSA 141
Query: 146 ----DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRX 201
D + VA ++ G++YL ++H D+ N+L+ K VKI+D G+ R V
Sbjct: 142 LEPPDFVHLVA-QIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDLGLFREV----- 195
Query: 202 XXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL-VG 260
+G + + +M+PE + G + D+WS GVV+ E G
Sbjct: 196 ---YAADYYKLLGNSLLP----IRWMAPEAIMY----GKFSIDSDIWSYGVVLWEVFSYG 244
Query: 261 HYPLIGFGEKPDLMALI 277
P G+ + D++ +I
Sbjct: 245 LQPYCGYSNQ-DVVEMI 260
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 123/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ +L+ Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 81 FLMEALIISKLNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 138
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 139 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 192
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A+ G CA + + + E + G + D WS GV++ E
Sbjct: 193 ------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 241 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 95/221 (42%), Gaps = 17/221 (7%)
Query: 54 VLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDS--QFIVKCH 111
VL G VY+ + S YALK L + R E +K+L + C
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNR-AIIQEVCFMKKLSGHPNIVQFCS 93
Query: 112 AVFYTIE----GEICFVM-EHMERGSLFDSLR---VRKKLSEDVISGVAYRVLKGLQYLH 163
A E G+ F++ + +G L + L+ R LS D + + Y+ + +Q++H
Sbjct: 94 AASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMH 153
Query: 164 GMQ--IIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
+ IIH D+K NLL++ +G +K+ DFG + + + + E I
Sbjct: 154 RQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTI--SHYPDYSWSAQRRALVEEEITRN 211
Query: 222 GTCAYMSPERVDSERWGGDYGFAGDVWSLGVVV-LECLVGH 261
T Y +PE +D G D+W+LG ++ L C H
Sbjct: 212 TTPMYRTPEIIDLYS-NFPIGEKQDIWALGCILYLLCFRQH 251
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 78/294 (26%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFV-MEHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F+ ME M G L LR R + S+
Sbjct: 80 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSL 137
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 138 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 191
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A+ G CA + + + E + G + D WS GV++ E
Sbjct: 192 ------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 240 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 22/141 (15%)
Query: 120 EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
++ VME M+ S ++ +L + +S + Y++L G+++LH IIH D+KPSN+++
Sbjct: 103 DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KI DFG++R + + T Y +PE + G
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMT---------------PYVVTRYYRAPEVI----LGM 200
Query: 240 DYGFAGDVWSLGVVVLECLVG 260
Y D+WS+G ++ E + G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 22/141 (15%)
Query: 120 EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
++ VME M+ S ++ +L + +S + Y++L G+++LH IIH D+KPSN+++
Sbjct: 103 DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KI DFG++R + + T Y +PE + G
Sbjct: 160 KSDATLKILDFGLARTAGTSFMMT---------------PYVVTRYYRAPEVI----LGM 200
Query: 240 DYGFAGDVWSLGVVVLECLVG 260
Y D+WS+G ++ E + G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQM--ELDHERMSYLLYQMLXGIKHLH 136
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KPSN+++ +KI DFG++R + + T
Sbjct: 137 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMT---------------PYVVT 181
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
Y +PE + G Y D+WS+G ++ E +
Sbjct: 182 RYYRAPEVI----LGMGYKENVDIWSVGCIMGEMV 212
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 117/268 (43%), Gaps = 31/268 (11%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G+ G V+++ +++ A+K + + R A E L S IV +
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE---VFR---AEELMACAGLTSPRIVPLYGAV 154
Query: 115 YTIEGE-ICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
EG + ME +E GSL ++ + L ED + L+GL+YLH +I+HGD+K
Sbjct: 155 R--EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 212
Query: 174 PSNLLINGKGE-VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA---CMGTCAYMSP 229
N+L++ G + DFG + ++ +G++ + GT +M+P
Sbjct: 213 ADNVLLSSDGSHAALCDFGHAVCLQPD------------GLGKSLLTGDYIPGTETHMAP 260
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMP 289
E V G DVWS ++L L G +P F P + L A E+P
Sbjct: 261 EVV----LGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP--LCLKIASEPPPVREIP 314
Query: 290 ETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ +P + ++ L K+ R + EL
Sbjct: 315 PSCAPLTAQAIQEGLRKEPIHRVSAAEL 342
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQM--ELDHERMSYLLYQMLXGIKHLH 143
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KPSN+++ +KI DFG++R + + T
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMT---------------PYVVT 188
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
Y +PE + G Y D+WS+G ++ E +
Sbjct: 189 RYYRAPEVI----LGMGYKENVDIWSVGCIMGEMV 219
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 81/206 (39%), Gaps = 20/206 (9%)
Query: 63 VYKVRHQKSNSIYALKVLNTT--SSTIIRHQAAHEAEILKRLDSQFIVKCHAVFYTIEGE 120
VY+ I ALK+ + T S + R + EA RL +V H F I+G+
Sbjct: 50 VYEAEDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVPIHD-FGEIDGQ 108
Query: 121 ICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN 180
+ + L LR + L+ + ++ L H H D+KP N+L++
Sbjct: 109 LYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENILVS 168
Query: 181 GKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGD 240
+ DFG++ + + +G +GT Y +PER
Sbjct: 169 ADDFAYLVDFGIASATTDEK---------LTQLGN----TVGTLYYXAPERFSESHA--- 212
Query: 241 YGFAGDVWSLGVVVLECLVGHYPLIG 266
+ D+++L V+ ECL G P G
Sbjct: 213 -TYRADIYALTCVLYECLTGSPPYQG 237
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLXQVIQM--ELDHERMSYLLYQMLCGIKHLH 143
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KPSN+++ +KI DFG++R + + T
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMT---------------PYVVT 188
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
Y +PE + G Y D+WS+G ++ E +
Sbjct: 189 RYYRAPEVI----LGMGYKENVDIWSVGCIMGEMV 219
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 59/128 (46%), Gaps = 31/128 (24%)
Query: 139 VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
++ +L + +S + Y++L G+++LH IIH D+KPSN+++ +KI DFG++R
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-- 176
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE------RVDSERWGGDYGFAGDVWSLGV 252
GT M+PE R G Y D+WS+G
Sbjct: 177 -----------------------GTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 253 VVLECLVG 260
++ E + G
Sbjct: 214 IMGEMIKG 221
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 81 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 138
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 139 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 192
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A+ G CA + + + E + G + D WS GV++ E
Sbjct: 193 ------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 241 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 27 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 86
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 87 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 144
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 145 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 198
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A+ G CA + + + E + G + D WS GV++ E
Sbjct: 199 ------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 246
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 247 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 296
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 37 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 96
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 97 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 154
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 155 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 208
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A+ G CA + + + E + G + D WS GV++ E
Sbjct: 209 ------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 256
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 257 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 306
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/215 (25%), Positives = 100/215 (46%), Gaps = 28/215 (13%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNII 86
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 143
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGT 223
IIH D+KPSN+++ +KI DFG++R + + T
Sbjct: 144 SAGIIHRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMT---------------PYVVT 188
Query: 224 CAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
Y +PE + G Y D+WS+G ++ E +
Sbjct: 189 RYYRAPEVI----LGMGYKENVDIWSVGCIMGEMV 219
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 20 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 79
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 80 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 137
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 138 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 191
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A+ G CA + + + E + G + D WS GV++ E
Sbjct: 192 ------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 239
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 240 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 289
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 116/268 (43%), Gaps = 31/268 (11%)
Query: 55 LGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHAVF 114
LG G+ G V+++ +++ A+K + + R A E L S IV +
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKKVRLE---VFR---AEELMACAGLTSPRIVPLYGAV 135
Query: 115 YTIEGE-ICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIK 173
EG + ME +E GSL ++ + L ED + L+GL+YLH +I+HGD+K
Sbjct: 136 R--EGPWVNIFMELLEGGSLGQLVKEQGCLPEDRALYYLGQALEGLEYLHSRRILHGDVK 193
Query: 174 PSNLLINGKGE-VKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA---CMGTCAYMSP 229
N+L++ G + DFG + ++ +G+ + GT +M+P
Sbjct: 194 ADNVLLSSDGSHAALCDFGHAVCLQPD------------GLGKDLLTGDYIPGTETHMAP 241
Query: 230 ERVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAICFGERLEMP 289
E V G DVWS ++L L G +P F P + L A E+P
Sbjct: 242 EVV----LGRSCDAKVDVWSSCCMMLHMLNGCHPWTQFFRGP--LCLKIASEPPPVREIP 295
Query: 290 ETASPEFRRFVRSCLEKDWRKRGTVEEL 317
+ +P + ++ L K+ R + EL
Sbjct: 296 PSCAPLTAQAIQEGLRKEPIHRVSAAEL 323
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 12 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 71
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 72 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 129
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 130 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 183
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A+ G CA + + + E + G + D WS GV++ E
Sbjct: 184 ------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 231
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 232 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 281
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 68/141 (48%), Gaps = 22/141 (15%)
Query: 120 EICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLI 179
++ VME M+ S ++ +L + +S + Y++L G+++LH IIH D+KPSN+++
Sbjct: 103 DVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV 159
Query: 180 NGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+KI DFG++R + + T Y +PE + G
Sbjct: 160 KSDCTLKILDFGLARTAGTSFMMT---------------PYVVTRYYRAPEVI----LGM 200
Query: 240 DYGFAGDVWSLGVVVLECLVG 260
Y D+WS+G ++ E + G
Sbjct: 201 GYKENVDIWSVGCIMGEMIKG 221
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 121/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 38 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 97
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 98 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 155
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 156 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 209
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A G CA + + + E + G + D WS GV++ E
Sbjct: 210 ------------DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 258 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 307
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 121/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 61 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 120
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 121 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 178
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG++R
Sbjct: 179 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----- 232
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A G CA + + + E + G + D WS GV++ E
Sbjct: 233 ------------DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 281 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 330
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 36/221 (16%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ-----AAHEAEILKRLDS 104
++L +G G GIV +++ + V S ++Q A E +LK ++
Sbjct: 27 QQLKPIGSGAQGIVCAA----FDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 82
Query: 105 QFIVKCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ I+ VF T+E ++ VME M+ +L + + +L + +S + Y++L G+
Sbjct: 83 KNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHM--ELDHERMSYLLYQMLCGI 139
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
++LH IIH D+KPSN+++ +KI DFG++R
Sbjct: 140 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLAR---------------TACTNFMMTP 184
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
+ T Y +PE + G Y D+WS+G ++ E + G
Sbjct: 185 YVVTRYYRAPEVI----LGMGYAANVDIWSVGCIMGELVKG 221
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 61/122 (50%), Gaps = 19/122 (15%)
Query: 139 VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
++ +L + +S + Y++L G+++LH IIH D+KPSN+++ +KI DFG++R
Sbjct: 121 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 180
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+ + + T Y +PE + G Y D+WS+G ++ E +
Sbjct: 181 SFMM---------------VPFVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMI 221
Query: 259 VG 260
G
Sbjct: 222 KG 223
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 26 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 85
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 86 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 142
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 143 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 173
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 98/233 (42%), Gaps = 28/233 (12%)
Query: 53 TVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLDSQFIVKCHA 112
+LG G G VYK R + A+K L + Q E E++ + +++
Sbjct: 36 NILGRGGFGKVYKGR-LADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRG 94
Query: 113 VFYTIEGEICFVMEHMERGSLFDSLRVRKK----LSEDVISGVAYRVLKGLQYLHGM--- 165
F E V +M GS+ LR R + L +A +GL YLH
Sbjct: 95 -FCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALGSARGLAYLHDHCDP 153
Query: 166 QIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCA 225
+IIH D+K +N+L++ + E + DFG++++++ A G
Sbjct: 154 KIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDX-------------HVXXAVRGXIG 200
Query: 226 YMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVGH--YPLIGFGEKPDLMAL 276
+++PE + + G DV+ GV++LE + G + L D+M L
Sbjct: 201 HIAPEYLST----GKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLL 249
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 143
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 137
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 21 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 80
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 81 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 137
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 138 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 168
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 144
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 65 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 124
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 181
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 27 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 86
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 87 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 143
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 144 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 174
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 20 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 79
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 80 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 136
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 137 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 167
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 28 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 87
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 88 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 144
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 145 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 175
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 101/221 (45%), Gaps = 36/221 (16%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQ-----AAHEAEILKRLDS 104
++L +G G GIV +++ + V S ++Q A E +LK ++
Sbjct: 25 QQLKPIGSGAQGIVCAA----FDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNH 80
Query: 105 QFIVKCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGL 159
+ I+ VF T+E ++ VME M+ +L + + +L + +S + Y++L G+
Sbjct: 81 KNIISLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIHM--ELDHERMSYLLYQMLCGI 137
Query: 160 QYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIA 219
++LH IIH D+KPSN+++ +KI DFG++R
Sbjct: 138 KHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMT---------------P 182
Query: 220 CMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
+ T Y +PE + G Y D+WS+G ++ E + G
Sbjct: 183 YVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 117/295 (39%), Gaps = 44/295 (14%)
Query: 33 FPTSN-PTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL-----NTTSST 86
FP S PT D ++++ +G G G+V+K R K S+ A+K L +
Sbjct: 8 FPKSRLPTLAD----NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 87 IIRHQA-AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLS 144
I + Q E I+ L+ IVK + + + VME + G L+ L + +
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIK 120
Query: 145 EDVISGVAYRVLKGLQYLHGMQ--IIHGDIKPSNLLINGKGE-----VKIADFGVSRIVE 197
V + + G++Y+ I+H D++ N+ + E K+ADFG+S+
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ--- 177
Query: 198 ETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLEC 257
+ +G +M+PE + +E Y D +S +++
Sbjct: 178 --------------QSVHSVSGLLGNFQWMAPETIGAEE--ESYTEKADTYSFAMILYTI 221
Query: 258 LVGHYPLIGFGE-KPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
L G P + K + +I G R +PE P R + C D +KR
Sbjct: 222 LTGEGPFDEYSYGKIKFINMIREE--GLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 80/151 (52%), Gaps = 9/151 (5%)
Query: 50 KKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAH-EAEILKRLDSQFIV 108
+ L +G G GIV + A+K L+ + A+ E ++K ++ + I+
Sbjct: 65 QNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNII 124
Query: 109 KCHAVFY---TIE--GEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLH 163
VF T+E ++ VME M+ +L +++ +L + +S + Y++L G+++LH
Sbjct: 125 SLLNVFTPQKTLEEFQDVYLVMELMD-ANLCQVIQM--ELDHERMSYLLYQMLCGIKHLH 181
Query: 164 GMQIIHGDIKPSNLLINGKGEVKIADFGVSR 194
IIH D+KPSN+++ +KI DFG++R
Sbjct: 182 SAGIIHRDLKPSNIVVKSDCTLKILDFGLAR 212
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/315 (20%), Positives = 116/315 (36%), Gaps = 63/315 (20%)
Query: 45 NISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRLD- 103
N D + + LG G V++ + +N +K+L I+ E +IL+ L
Sbjct: 35 NQDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVKKNKIKR----EIKILENLRG 90
Query: 104 -SQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYL 162
I V + V EH+ D ++ + L++ I Y +LK L Y
Sbjct: 91 GPNIITLADIVKDPVSRTPALVFEHVNNT---DFKQLYQTLTDYDIRFYMYEILKALDYC 147
Query: 163 HGMQIIHGDIKPSNLLINGKG-EVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACM 221
H M I+H D+KP N++I+ + ++++ D+G++ G+ +
Sbjct: 148 HSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHP---------------GQEYNVRV 192
Query: 222 GTCAYMSPE-RVDSERWGGDYGFAGDVWSLGVVVLECLVGHYPLIGFGEKPDLMALICAI 280
+ + PE VD + Y ++ D+WSLG ++ + P + D + I +
Sbjct: 193 ASRYFKGPELLVDYQM----YDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 248
Query: 281 CFGERL---------------------------------EMPETASPEFRRFVRSCLEKD 307
E L E SPE F+ L D
Sbjct: 249 LGTEDLYDYIDKYNIELDPRFNDILGRHSRKRWERFVHSENQHLVSPEALDFLDKLLRYD 308
Query: 308 WRKRGTVEELLAYPF 322
+ R T E + +P+
Sbjct: 309 HQSRLTAREAMEHPY 323
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 51/233 (21%)
Query: 55 LGHGN-GGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL-----DSQFIV 108
LG G G +V + H + S ALK++ R A E +LK++ +++F+
Sbjct: 27 LGEGTFGKVVECLDHARGKSQVALKIIRNVGK--YREAARLEINVLKKIKEKDKENKFLC 84
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV--ISGVAYRVLKGLQYLHGMQ 166
+ ++ G +C E + + + F+ L+ + + +AY++ L++LH Q
Sbjct: 85 VLMSDWFNFHGHMCIAFELLGKNT-FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ 143
Query: 167 IIHGDIKPSNLL-INGKGE------------------VKIADFGVSRIVEETRXXXXXXX 207
+ H D+KP N+L +N + E +++ADFG + E
Sbjct: 144 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH------- 196
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
+ T Y PE + W DVWS+G ++ E G
Sbjct: 197 ----------TTIVATRHYRPPEVILELGWAQ----PCDVWSIGCILFEYYRG 235
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 76/294 (25%), Positives = 122/294 (41%), Gaps = 51/294 (17%)
Query: 45 NISDLKKLTV--------LGHGNGGIVYK-----VRHQKSNSIYALKVLNTTSSTIIRHQ 91
+ISDLK++ LGHG G VY+ + + S A+K L S
Sbjct: 21 SISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELD 80
Query: 92 AAHEAEILKRLDSQFIVKCHAVFYTIEGEICFVM-EHMERGSLFDSLR-VRKKLSE---- 145
EA I+ + + Q IV+C V +++ F++ E M G L LR R + S+
Sbjct: 81 FLMEALIISKFNHQNIVRCIGV--SLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSL 138
Query: 146 ---DVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN--GKGEV-KIADFGVSRIVEET 199
D++ VA + G QYL IH DI N L+ G G V KI DFG+++
Sbjct: 139 AMLDLLH-VARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMAQ----- 192
Query: 200 RXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERW-GGDYGFAGDVWSLGVVVLECL 258
I A+ G CA + + + E + G + D WS GV++ E
Sbjct: 193 ------------DIYRASYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 240
Query: 259 -VGHYPLIGFGEKPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
+G+ P + +++ + + G R++ P+ R + C + R
Sbjct: 241 SLGYMPYPSKSNQ-EVLEFVTS---GGRMDPPKNCPGPVYRIMTQCWQHQPEDR 290
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 23/171 (13%)
Query: 121 ICFVMEHMERGSLFDSLRVRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLIN 180
+ M ++E S D L LS + + K L+ +H I+H D+KPSN L N
Sbjct: 95 VVIAMPYLEHESFLDIL---NSLSFQEVREYMLNLFKALKRIHQFGIVHRDVKPSNFLYN 151
Query: 181 GK-GEVKIADFGVSRIVEETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGG 239
+ + + DFG+++ +T+ + C+ R G
Sbjct: 152 RRLKKYALVDFGLAQGTHDTKIELLKFVQSE---AQQERCSQNKCSICLSRRQQVAPRAG 208
Query: 240 DYGF--------------AGDVWSLGVVVLECLVGHYPLIGFGEKPDLMAL 276
GF A D+WS GV+ L L G YP + DL AL
Sbjct: 209 TPGFRAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPF--YKASDDLTAL 257
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 68/295 (23%), Positives = 116/295 (39%), Gaps = 44/295 (14%)
Query: 33 FPTSN-PTSPDVENISDLKKLTVLGHGNGGIVYKVRHQKSNSIYALKVL-----NTTSST 86
FP S PT D ++++ +G G G+V+K R K S+ A+K L +
Sbjct: 8 FPKSRLPTLAD----NEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEM 63
Query: 87 IIRHQA-AHEAEILKRLDSQFIVKCHAVFYTIEGEICFVMEHMERGSLFDSLRVRK-KLS 144
I + Q E I+ L+ IVK + + + VME + G L+ L + +
Sbjct: 64 IEKFQEFQREVFIMSNLNHPNIVKLYGLMHNPPR---MVMEFVPCGDLYHRLLDKAHPIK 120
Query: 145 EDVISGVAYRVLKGLQYLHGMQ--IIHGDIKPSNLLINGKGE-----VKIADFGVSRIVE 197
V + + G++Y+ I+H D++ N+ + E K+ADFG S+
Sbjct: 121 WSVKLRLMLDIALGIEYMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ--- 177
Query: 198 ETRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLEC 257
+ +G +M+PE + +E Y D +S +++
Sbjct: 178 --------------QSVHSVSGLLGNFQWMAPETIGAEE--ESYTEKADTYSFAMILYTI 221
Query: 258 LVGHYPLIGFGE-KPDLMALICAICFGERLEMPETASPEFRRFVRSCLEKDWRKR 311
L G P + K + +I G R +PE P R + C D +KR
Sbjct: 222 LTGEGPFDEYSYGKIKFINMIREE--GLRPTIPEDCPPRLRNVIELCWSGDPKKR 274
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 19/122 (15%)
Query: 139 VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
++ +L + +S + Y++L G+++LH IIH D+KPSN+++ +KI DFG++R
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+ + T Y +PE + G Y D+WS+G ++ E +
Sbjct: 179 SFMMT---------------PYVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMI 219
Query: 259 VG 260
G
Sbjct: 220 KG 221
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 60/122 (49%), Gaps = 19/122 (15%)
Query: 139 VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
++ +L + +S + Y++L G+++LH IIH D+KPSN+++ +KI DFG++R
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 178
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+ + T Y +PE + G Y D+WS+G ++ E +
Sbjct: 179 SFMMT---------------PYVVTRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMI 219
Query: 259 VG 260
G
Sbjct: 220 KG 221
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 56/124 (45%), Gaps = 31/124 (25%)
Query: 139 VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
++ +L + +S + Y++L G+++LH IIH D+KPSN+++ +KI DFG++R
Sbjct: 119 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTA-- 176
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPE------RVDSERWGGDYGFAGDVWSLGV 252
GT M PE R G Y D+WS+G
Sbjct: 177 -----------------------GTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGC 213
Query: 253 VVLE 256
++ E
Sbjct: 214 IMGE 217
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/122 (27%), Positives = 59/122 (48%), Gaps = 19/122 (15%)
Query: 139 VRKKLSEDVISGVAYRVLKGLQYLHGMQIIHGDIKPSNLLINGKGEVKIADFGVSRIVEE 198
++ +L + +S + Y++L G+++LH IIH D+KPSN+++ +KI DFG++R
Sbjct: 120 IQMELDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGT 179
Query: 199 TRXXXXXXXXXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECL 258
+ T Y +PE + G Y D+WS+G ++ E +
Sbjct: 180 SFMMTPYVV---------------TRYYRAPEVI----LGMGYKENVDIWSVGCIMGEMI 220
Query: 259 VG 260
G
Sbjct: 221 KG 222
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 51/233 (21%)
Query: 55 LGHGN-GGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL-----DSQFIV 108
LG G G +V + H + S ALK++ R A E +LK++ +++F+
Sbjct: 36 LGEGTFGKVVECLDHARGKSQVALKIIRNVGK--YREAARLEINVLKKIKEKDKENKFLC 93
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV--ISGVAYRVLKGLQYLHGMQ 166
+ ++ G +C E + + + F+ L+ + + +AY++ L++LH Q
Sbjct: 94 VLMSDWFNFHGHMCIAFELLGKNT-FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ 152
Query: 167 IIHGDIKPSNLL-INGKGE------------------VKIADFGVSRIVEETRXXXXXXX 207
+ H D+KP N+L +N + E +++ADFG + E
Sbjct: 153 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH------- 205
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
+ T Y PE + W DVWS+G ++ E G
Sbjct: 206 ----------TTIVATRHYRPPEVILELGWAQ----PCDVWSIGCILFEYYRG 244
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/233 (22%), Positives = 94/233 (40%), Gaps = 51/233 (21%)
Query: 55 LGHGN-GGIVYKVRHQKSNSIYALKVLNTTSSTIIRHQAAHEAEILKRL-----DSQFIV 108
LG G G +V + H + S ALK++ R A E +LK++ +++F+
Sbjct: 59 LGEGTFGKVVECLDHARGKSQVALKIIRNVGK--YREAARLEINVLKKIKEKDKENKFLC 116
Query: 109 KCHAVFYTIEGEICFVMEHMERGSLFDSLRVRKKLSEDV--ISGVAYRVLKGLQYLHGMQ 166
+ ++ G +C E + + + F+ L+ + + +AY++ L++LH Q
Sbjct: 117 VLMSDWFNFHGHMCIAFELLGKNT-FEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQ 175
Query: 167 IIHGDIKPSNLL-INGKGE------------------VKIADFGVSRIVEETRXXXXXXX 207
+ H D+KP N+L +N + E +++ADFG + E
Sbjct: 176 LTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSIRVADFGSATFDHEHH------- 228
Query: 208 XXXXXIGEAAIACMGTCAYMSPERVDSERWGGDYGFAGDVWSLGVVVLECLVG 260
+ T Y PE + W DVWS+G ++ E G
Sbjct: 229 ----------TTIVATRHYRPPEVILELGWAQ----PCDVWSIGCILFEYYRG 267
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,735,415
Number of Sequences: 62578
Number of extensions: 390136
Number of successful extensions: 3489
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1077
Number of HSP's successfully gapped in prelim test: 31
Number of HSP's that attempted gapping in prelim test: 677
Number of HSP's gapped (non-prelim): 1247
length of query: 337
length of database: 14,973,337
effective HSP length: 99
effective length of query: 238
effective length of database: 8,778,115
effective search space: 2089191370
effective search space used: 2089191370
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 52 (24.6 bits)