BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019651
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q969V5|MUL1_HUMAN Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Homo sapiens
GN=MUL1 PE=1 SV=1
Length = 352
Score = 91.3 bits (225), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 95/343 (27%), Positives = 152/343 (44%), Gaps = 36/343 (10%)
Query: 14 AALYLLGRSSGRDAELLKTVTRVNQLEELAHLL-DGGSKVLP-SIVSVSGRVGSETPISC 71
AALY + R R ++ LK +V+ E+L +L + K +P +++ + R ET S
Sbjct: 23 AALYSVYRQKARVSQELKGAKKVHLGEDLKSILSEAPGKCVPYAVIEGAVRSVKETLNSQ 82
Query: 72 EYSGLRGVIVEETTERHFLKHNDAGS-WIQDSALMLSMSKEVPWYL---DDGTG-CVFVV 126
+GVI T + H + N W S ++ + VP+ L +DG V V+
Sbjct: 83 FVENCKGVIQRLTLQEHKMVWNRTTHLWNDCSKIIHQRTNTVPFDLVPHEDGVDVAVRVL 142
Query: 127 GARGATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEAV 186
+ L E F S +S Y+ G + G++ +L G +LT VGE V
Sbjct: 143 KPLDSVDLGLETVYEKFHPSIQSFTDVIGHYISGERPKGIQETEEMLKVGATLTGVGELV 202
Query: 187 KDDIGTVRIQRPHKG-PFYVSPKTIDELLENLGKWARWYKYAS--FGLTIFGAFLIAKRV 243
D+ +VR+Q P +G +Y+S + D LL+ R +K + FG R
Sbjct: 203 LDN-NSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLWKVLALVFGFATCATLFFILR- 260
Query: 244 IRCILQRKRRWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDR-VMPDLCVICLE 302
+ LQR+ R L++ +Q Q++E A+ S + DR + CV+CL
Sbjct: 261 -KQYLQRQERLRLKQ-------MQEEFQEHE-----AQLLSRAKPEDRESLKSACVVCLS 307
Query: 303 Q-------ECGHLCCCLICSSRLT---NCPLCRRRIDQVVRTF 335
ECGH+C C C L CP+CR+ I +V+ +
Sbjct: 308 SFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLY 350
>sp|Q4R7G8|MUL1_MACFA Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Macaca
fascicularis GN=MUL1 PE=2 SV=1
Length = 352
Score = 87.8 bits (216), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 94/343 (27%), Positives = 151/343 (44%), Gaps = 36/343 (10%)
Query: 14 AALYLLGRSSGRDAELLKTVTRVNQLEELAHLL-DGGSKVLP-SIVSVSGRVGSETPISC 71
AALY + R ++ LK +V+ E+L +L + K +P +++ + R ET S
Sbjct: 23 AALYSVYRQKAWVSQELKGAKKVHLGEDLKSILSEAPGKCVPYAVIEGAVRSVKETLNSQ 82
Query: 72 EYSGLRGVIVEETTERHFLKHNDAGS-WIQDSALMLSMSKEVPWYL---DDGTG-CVFVV 126
+GVI T + H + N W S ++ + VP+ L +DG V V+
Sbjct: 83 FVENCKGVIQRLTLQEHKMVWNRTTHLWNDCSKIIHQRTNTVPFDLVPHEDGVDVAVRVL 142
Query: 127 GARGATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEAV 186
+ L E F S +S Y+ G + G++ +L G +LT VGE V
Sbjct: 143 KPLDSVDLGLEAVYEKFHPSIQSFTDVIGHYISGERPKGIQETEEMLKVGATLTGVGELV 202
Query: 187 KDDIGTVRIQRPHKG-PFYVSPKTIDELLENLGKWARWYKYAS--FGLTIFGAFLIAKRV 243
D+ +VR+Q P +G +Y+S + D LL+ R +K + FG R
Sbjct: 203 LDN-NSVRLQPPKQGMQYYLSSQDFDSLLQRQESSVRLWKVLALVFGFATCATLFFILR- 260
Query: 244 IRCILQRKRRWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDR-VMPDLCVICLE 302
+ LQR+ R L++ +Q Q++E A+ S + DR + CV+CL
Sbjct: 261 -KQYLQRQERLRLKQ-------MQEEFQEHE-----AQLLSRAKPEDRESLKSACVVCLS 307
Query: 303 Q-------ECGHLCCCLICSSRLT---NCPLCRRRIDQVVRTF 335
ECGH+C C C L CP+CR+ I +V+ +
Sbjct: 308 SFKSCVFLECGHVCSCTECYRALPEPKKCPICRQAITRVIPLY 350
>sp|Q6NTT6|MUL1_XENLA Mitochondrial ubiquitin ligase activator of nfkb 1 OS=Xenopus
laevis GN=mul1 PE=2 SV=1
Length = 353
Score = 84.7 bits (208), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 89/344 (25%), Positives = 144/344 (41%), Gaps = 37/344 (10%)
Query: 14 AALYLLGRSSGRDAELLKTVTRVNQLEELAHLL-DGGSKVLPSIVSVSGRVGSETPISCE 72
A Y + R R + LK + ++L +L D K +P V + ++ +
Sbjct: 23 ALFYSIYRHKYRSVQTLKEAKKFCLTDDLPAVLSDLPGKCVPYAVIEGAVTSVKEVLNSQ 82
Query: 73 Y-SGLRGVIVEETTERHFLKHNDAGS-WIQDSALMLSMSKEVPWYL---DDGTGCVFVVG 127
Y +GVI + + H + N W ++ S VP+ L + G V V
Sbjct: 83 YVENCKGVIQRLSLKEHKMVWNRTTHLWNDHEKIIHQRSNTVPFDLAPENPGESGVSVRV 142
Query: 128 ARG--ATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEA 185
R A L E F + +S + Y+ G + GV+ +L G ++T VGE
Sbjct: 143 LRPLEAVDLGLETIYEKFHPAVQSFSNILGHYMTGERPKGVQETEEMLKIGATITGVGEL 202
Query: 186 VKDDIGTVRIQRPHKGP-FYVSPKTIDELLENLGKWARWYKYAS--FGL-TIFGAFLIAK 241
V D+ T+++Q P G FY+S + LLE RW++ S FG+ + F I +
Sbjct: 203 VLDN-KTIKLQPPKDGMLFYLSSMDYEGLLEKQEVQMRWWRILSIVFGVASCITLFFILR 261
Query: 242 RVIRCILQRKRRWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICL 301
R R +++ L+R + A QR +Q+ Q + + C ICL
Sbjct: 262 RKYRHYKEKQHLKNLQREFEESRARQRVQQE--------------PQNKEEVQNPCSICL 307
Query: 302 EQE-------CGHLCCCLICSSRLTN---CPLCRRRIDQVVRTF 335
E CGH+C C+ C L + CP+CR ID++V +
Sbjct: 308 STEKSCVFLECGHVCSCISCYQALPSPKKCPICRNFIDRIVPLY 351
>sp|Q5M7X9|MUL1A_DANRE Mitochondrial ubiquitin ligase activator of nfkb 1-A OS=Danio rerio
GN=mul1a PE=2 SV=1
Length = 341
Score = 81.6 bits (200), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 97/350 (27%), Positives = 135/350 (38%), Gaps = 41/350 (11%)
Query: 6 GISCCLSGAALYLLGRSSGRDAELLKTVTRVNQLEELAHLLDGGSKVLPSIVSVSGRVGS 65
G S LSG Y + R + + LK + +L LL+ V V G V
Sbjct: 13 GSSVALSGL-FYYIYRKKRKTVDKLKEAPVMALDAKLIDLLNATPGKCLQYVVVEGTVQP 71
Query: 66 E-TPISCEYS-GLRGVIVEETTERHFLKHNDAGS-WIQDSALMLSMSKEVPW-YLDDGTG 121
P+ ++ GVI + H L N G W ++L VP+ L
Sbjct: 72 VGEPLRSQFQESSVGVIQKLVLREHKLVWNSLGRIWTDSERVLLQRVNAVPFNLLGLNKS 131
Query: 122 CVFVVGARGATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTV 181
V V+ ATG + + E F ++ YL G K G +L G SLTV
Sbjct: 132 FVRVLCPLEATGPKMEIVHEKFHQATYGFTDLIGQYLSGEKPKGQLETEEMLKVGASLTV 191
Query: 182 VGEAVKDDIGTVRIQRPHKGP-FYVSPKTIDELL-ENLGKWARWYKYASFGLTIFGAFLI 239
VGE + D ++I+ P G +++S + LL E G+ W +A A LI
Sbjct: 192 VGELILDTDRLLKIRPPTDGSEYFLSSADFETLLMEQEGQAEVWRVFACICALAGVAVLI 251
Query: 240 --AKRVIRCILQRKRRWELR--RRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPD 295
+R R Q K RWE RR E+DN N
Sbjct: 252 WTGRRYYR---QLKLRWEQENLRREFEGMGTGEREEDNGVENA----------------- 291
Query: 296 LCVICLEQ-------ECGHLCCCLICSSRLTN--CPLCRRRIDQVVRTFR 336
CVICL +CGH+CCC C L CP+CR+ I +VV ++
Sbjct: 292 -CVICLSNPRGCVLLDCGHVCCCFRCYQALPQPFCPICRQHIKRVVPLYQ 340
>sp|Q8VCM5|MUL1_MOUSE Mitochondrial ubiquitin ligase activator of NFKB 1 OS=Mus musculus
GN=Mul1 PE=2 SV=2
Length = 352
Score = 78.2 bits (191), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 90/342 (26%), Positives = 147/342 (42%), Gaps = 34/342 (9%)
Query: 14 AALYLLGRSSGRDAELLKTVTRVNQLEELAHLL-DGGSKVLP-SIVSVSGRVGSETPISC 71
A LY + R + A+ LK +++ E+L +L + K +P +++ + R ET S
Sbjct: 23 AVLYSIYRQKAQVAQELKGAKKIHLGEDLKGILSEAPGKCVPYAVIEGAVRSVKETLNSQ 82
Query: 72 EYSGLRGVIVEETTERHFLKHNDAGS-WIQDSALMLSMSKEVPWYL---DDGTGC-VFVV 126
+GVI + + H + N W S ++ + VP+ L +DG V V+
Sbjct: 83 FVENCKGVIQRLSLQEHKMVWNRTTHLWNDYSKIIHQRTNTVPFDLVPHEDGVAVSVRVL 142
Query: 127 GARGATGFALTVGSEVFEESGRSLVHGTLDYLQGLKMLGVKRIGRLLPTGTSLTVVGEAV 186
+ L E F S +S Y+ G + G++ +L G +LT +GE V
Sbjct: 143 KPLDSVDLGLETVYEKFHPSVQSFTDAIGHYISGERPKGIQETEEMLKVGATLTGIGELV 202
Query: 187 KDDIGTVRIQRPHKG-PFYVSPKTIDELLENLGKWARWYKYASFGLTIFGAFLIAKRVIR 245
D+ VR+Q P +G +Y+S + D LL R +K + +FG A
Sbjct: 203 LDN-NAVRLQPPKQGMQYYLSSQDFDSLLHRQESSVRLWKIL---VLVFGFATCATLF-- 256
Query: 246 CILQRKRRWELRRRVLAAAAVQRSEQDNEG-TNGQAENGSDSTQRDR-VMPDLCVICLEQ 303
+ LR++ L R +Q E +A+ S ++ DR + CV+CL
Sbjct: 257 --------FILRKQYLHRQERLRQQQLQEEFLEHEAQLLSQASPEDRESLKSACVVCLSN 308
Query: 304 -------ECGHLCCCLICSSRLTN---CPLCRRRIDQVVRTF 335
ECGH+C C C L CP+CRR I +V+ +
Sbjct: 309 FKSCVFLECGHVCSCRQCYLALPEPKRCPICRREITRVIPLY 350
>sp|Q557E7|CBLA_DICDI E3 ubiquitin-protein ligase cblA OS=Dictyostelium discoideum
GN=cblA-1 PE=1 SV=1
Length = 665
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 37/66 (56%), Gaps = 13/66 (19%)
Query: 278 GQAENGSDSTQRDRVMPDLCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQ 330
NGSD ++ DLC +C++ E CGHL CC +CS +L CP+CR RI +
Sbjct: 605 NNNNNGSDESK------DLCTVCMDNEINTVFLECGHLSCCSLCSVKLKKCPICRSRITR 658
Query: 331 VVRTFR 336
V+ F+
Sbjct: 659 VINIFK 664
>sp|Q7XI08|XB34_ORYSJ Probable E3 ubiquitin-protein ligase XBOS34 OS=Oryza sativa subsp.
japonica GN=XBOS34 PE=2 SV=1
Length = 513
Score = 52.8 bits (125), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 40/75 (53%), Gaps = 11/75 (14%)
Query: 272 DNEGTNGQAENGSDSTQRDRVMPDLCVICLEQE-------CGHLCCCLIC----SSRLTN 320
+NEG AE+ ++++ P CVICL+ CGH+ C+ C S+
Sbjct: 437 ENEGDAKPAESDANASNSGNTPPGTCVICLDAPVEGACIPCGHMAGCMSCLKDIESKKWG 496
Query: 321 CPLCRRRIDQVVRTF 335
CP+CR +I+Q++R +
Sbjct: 497 CPICRAKINQIIRLY 511
>sp|O76050|NEU1A_HUMAN Neuralized-like protein 1A OS=Homo sapiens GN=NEURL PE=2 SV=1
Length = 574
Score = 47.8 bits (112), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 18/77 (23%)
Query: 278 GQAENGSDSTQRDRVMP------DLCVICLEQE-------CGHLCCCLICSSRLTN---- 320
G A N S V P D C IC E CGH+C C C RL
Sbjct: 496 GTAPNSPVSLPESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYACGLRLKKALHA 555
Query: 321 -CPLCRRRIDQVVRTFR 336
CP+CRR I +++T+R
Sbjct: 556 CCPICRRPIKDIIKTYR 572
>sp|Q6ZQM0|RFFL_MOUSE E3 ubiquitin-protein ligase rififylin OS=Mus musculus GN=Rffl PE=1
SV=1
Length = 377
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 253 RWELRRRVLAAAAVQRSEQD----NEGTNGQAENGSDSTQRDRVMPDLCVICLEQECGHL 308
+WEL RV Q+ Q NE NG A ++ D + C+ ECGH+
Sbjct: 289 KWELMERVTRLYKDQKGLQHLVSGNEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHM 348
Query: 309 CCCLICSSRLTNCPLCRRRIDQVVRTFR 336
C C R+ CP+CR+ + + V FR
Sbjct: 349 VTCTKCGKRMNECPICRQYVIRAVHVFR 376
>sp|Q8CIN9|RFFL_RAT E3 ubiquitin-protein ligase rififylin OS=Rattus norvegicus GN=Rffl
PE=1 SV=1
Length = 362
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 4/88 (4%)
Query: 253 RWELRRRVLAAAAVQRSEQD----NEGTNGQAENGSDSTQRDRVMPDLCVICLEQECGHL 308
+WEL RV Q+ Q NE NG A ++ D + C+ ECGH+
Sbjct: 274 KWELMERVTRLYKDQKGLQHLVSGNEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHM 333
Query: 309 CCCLICSSRLTNCPLCRRRIDQVVRTFR 336
C C R+ CP+CR+ + + V FR
Sbjct: 334 VTCTKCGKRMNECPICRQYVIRAVHVFR 361
>sp|Q24307|IAP2_DROME Apoptosis 2 inhibitor OS=Drosophila melanogaster GN=Iap2 PE=2 SV=3
Length = 498
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 7/47 (14%)
Query: 296 LCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
LC +CL++E CGHL C C+ + NCP+CR I VRTF
Sbjct: 450 LCKVCLDEEVGVVFLPCGHLATCNQCAPSVANCPMCRADIKGFVRTF 496
>sp|Q923S6|NEU1A_MOUSE Neuralized-like protein 1A OS=Mus musculus GN=Neurl PE=1 SV=1
Length = 574
Score = 47.0 bits (110), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 33/77 (42%), Gaps = 18/77 (23%)
Query: 278 GQAENGSDSTQRDRVMP------DLCVICLEQE-------CGHLCCCLICSSRLTN---- 320
G A N S V P D C IC E CGH+C C C RL
Sbjct: 496 GTAPNSPVSLPESPVTPGLGQWSDECTICYEHAVDTVIYTCGHMCLCYSCGLRLKKALHA 555
Query: 321 -CPLCRRRIDQVVRTFR 336
CP+CRR I +++T+R
Sbjct: 556 CCPICRRPIKDIIKTYR 572
>sp|Q6AYH3|RNF34_RAT E3 ubiquitin-protein ligase RNF34 OS=Rattus norvegicus GN=Rnf34
PE=1 SV=1
Length = 381
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 253 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQECGHLCCCL 312
+WEL +V Q + G Q ++ D + R+ D + C+ ECGH+ C
Sbjct: 298 KWELVEKVNRLYKENEENQKSYGERMQLQDEEDDS-LCRICMDAVIDCVLLECGHMVTCT 356
Query: 313 ICSSRLTNCPLCRRRIDQVVRTFR 336
C R++ CP+CR+ + + V F+
Sbjct: 357 KCGKRMSECPICRQYVVRAVHVFK 380
>sp|D3ZDI6|MYLIP_RAT E3 ubiquitin-protein ligase MYLIP OS=Rattus norvegicus GN=Mylip
PE=2 SV=1
Length = 445
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 16/66 (24%)
Query: 286 STQRDRVMPD---------LCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRID 329
S Q+ RV+ + LC++C E+E CGH CC C+++L +CP+CR R++
Sbjct: 367 SCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVE 426
Query: 330 QVVRTF 335
V +
Sbjct: 427 HVQHVY 432
>sp|Q8WY64|MYLIP_HUMAN E3 ubiquitin-protein ligase MYLIP OS=Homo sapiens GN=MYLIP PE=1
SV=2
Length = 445
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 16/66 (24%)
Query: 286 STQRDRVMPD---------LCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRID 329
S Q+ RV+ + LC++C E+E CGH CC C+++L +CP+CR R++
Sbjct: 367 SCQQTRVLQEKLRKLKEAMLCMVCCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVE 426
Query: 330 QVVRTF 335
V +
Sbjct: 427 HVQHVY 432
>sp|Q99KR6|RNF34_MOUSE E3 ubiquitin-protein ligase RNF34 OS=Mus musculus GN=Rnf34 PE=1
SV=1
Length = 376
Score = 46.2 bits (108), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 253 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQECGHLCCCL 312
+WEL +V Q + G Q ++ D + R+ D + C+ ECGH+ C
Sbjct: 293 KWELVEKVNRLYKENEENQKSYGERMQLQDEEDDS-LCRICMDAVIDCVLLECGHMVTCT 351
Query: 313 ICSSRLTNCPLCRRRIDQVVRTFR 336
C R++ CP+CR+ + + V F+
Sbjct: 352 KCGKRMSECPICRQYVVRAVHVFK 375
>sp|Q5E9J6|RNF34_BOVIN E3 ubiquitin-protein ligase RNF34 OS=Bos taurus GN=RNF34 PE=2 SV=1
Length = 375
Score = 45.8 bits (107), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 253 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQECGHLCCCL 312
+WEL +V Q + G Q ++ D + R+ D + C+ ECGH+ C
Sbjct: 292 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDSLC-RICMDAVIDCVLLECGHMVTCT 350
Query: 313 ICSSRLTNCPLCRRRIDQVVRTFR 336
C R++ CP+CR+ + + V F+
Sbjct: 351 KCGKRMSECPICRQYVVRAVHVFK 374
>sp|Q969K3|RNF34_HUMAN E3 ubiquitin-protein ligase RNF34 OS=Homo sapiens GN=RNF34 PE=1
SV=1
Length = 372
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 253 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQECGHLCCCL 312
+WEL +V Q + G Q ++ D + R+ D + C+ ECGH+ C
Sbjct: 289 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS-LCRICMDAVIDCVLLECGHMVTCT 347
Query: 313 ICSSRLTNCPLCRRRIDQVVRTFR 336
C R++ CP+CR+ + + V F+
Sbjct: 348 KCGKRMSECPICRQYVVRAVHVFK 371
>sp|Q5NVC7|RNF34_PONAB E3 ubiquitin-protein ligase RNF34 OS=Pongo abelii GN=RNF34 PE=2
SV=2
Length = 372
Score = 45.4 bits (106), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 41/84 (48%), Gaps = 1/84 (1%)
Query: 253 RWELRRRVLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQECGHLCCCL 312
+WEL +V Q + G Q ++ D + R+ D + C+ ECGH+ C
Sbjct: 289 KWELVEKVNRLYKENEENQKSYGERLQLQDEEDDS-LCRICMDAVIDCVLLECGHMVTCT 347
Query: 313 ICSSRLTNCPLCRRRIDQVVRTFR 336
C R++ CP+CR+ + + V F+
Sbjct: 348 KCGKRMSECPICRQYVVRAVHVFK 371
>sp|Q05AK5|MYLIB_DANRE E3 ubiquitin-protein ligase MYLIP-B OS=Danio rerio GN=mylipb PE=2
SV=1
Length = 464
Score = 45.1 bits (105), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 27/46 (58%), Gaps = 7/46 (15%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
C +C EQE CGH+ CC C+S+L CP+CR +D+V +
Sbjct: 381 CALCCEQEISAAFCPCGHMFCCYNCASQLQCCPVCRSEVDRVQHVY 426
>sp|Q6TEM9|MYLIA_DANRE E3 ubiquitin-protein ligase MYLIP-A OS=Danio rerio GN=mylipa PE=1
SV=2
Length = 472
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 29/47 (61%), Gaps = 7/47 (14%)
Query: 296 LCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
LC++C E+E CGH+ CC C+++L +CP+CR ++ V +
Sbjct: 383 LCMLCCEEEIDAAFCPCGHMVCCQNCAAQLQSCPVCRSEVEHVQHVY 429
>sp|Q8BM54|MYLIP_MOUSE E3 ubiquitin-protein ligase MYLIP OS=Mus musculus GN=Mylip PE=1
SV=1
Length = 445
Score = 45.1 bits (105), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 35/66 (53%), Gaps = 16/66 (24%)
Query: 286 STQRDRVMPD---------LCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRID 329
S Q+ RV+ + LC+ C E+E CGH CC C+++L +CP+CR R++
Sbjct: 367 SCQQTRVLQEKLRKLKEAMLCMACCEEEINSTFCPCGHTVCCESCAAQLQSCPVCRSRVE 426
Query: 330 QVVRTF 335
V +
Sbjct: 427 HVQHVY 432
>sp|Q8WZ73|RFFL_HUMAN E3 ubiquitin-protein ligase rififylin OS=Homo sapiens GN=RFFL PE=1
SV=1
Length = 363
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 253 RWELRRRVLAAAAVQRSEQD----NEGTNGQAENGSDSTQRDRVMPDLCVICLEQECGHL 308
+WEL RV Q+ Q E NG A ++ D + C+ ECGH+
Sbjct: 275 KWELMERVTRLYKDQKGLQHLVSGAEDQNGGAVPSGLEENLCKICMDSPIDCVLLECGHM 334
Query: 309 CCCLICSSRLTNCPLCRRRIDQVVRTFR 336
C C R+ CP+CR+ + + V FR
Sbjct: 335 VTCTKCGKRMNECPICRQYVIRAVHVFR 362
>sp|Q84ME1|LUL3_ARATH Probable E3 ubiquitin-protein ligase LUL3 OS=Arabidopsis thaliana
GN=LUL3 PE=1 SV=1
Length = 378
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 52/116 (44%), Gaps = 25/116 (21%)
Query: 238 LIAKRVIRCILQRKRRWELRRRVLAAAAVQRSEQ---------DNEGTNGQAENGSDSTQ 288
L+ K++ + +L++ + +V+ E+ DN T G A +G + T
Sbjct: 258 LVHKQITQAVLEKTNDGSFKVKVMKQILWIEGERYELQELYGIDNSITQGTAASGLEDTG 317
Query: 289 RDRVMPDLCVICLEQE-------CGHLCCCLICSSRL---TN-CPLCRRRIDQVVR 333
CVICL + C HLC C C+ L TN CP+CR+ I ++V+
Sbjct: 318 GKE-----CVICLTEPKDTAVMPCRHLCLCSDCAEELRFQTNKCPICRQPIHELVK 368
>sp|Q24306|IAP1_DROME Apoptosis 1 inhibitor OS=Drosophila melanogaster GN=th PE=1 SV=2
Length = 438
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 11/68 (16%)
Query: 275 GTNGQAENGSDSTQRDRVMPDLCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRR 327
T +GS S ++ LC IC E CGH+ C C+S +T CPLCR+
Sbjct: 373 ATPSTNSSGSTSIPEEK----LCKICYGAEYNTAFLPCGHVVACAKCASSVTKCPLCRKP 428
Query: 328 IDQVVRTF 335
V+R +
Sbjct: 429 FTDVMRVY 436
>sp|Q13489|BIRC3_HUMAN Baculoviral IAP repeat-containing protein 3 OS=Homo sapiens
GN=BIRC3 PE=1 SV=2
Length = 604
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
C +C+++E CGHL C C+ L CP+CR I VRTF
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRSTIKGTVRTF 602
>sp|P41437|IAP3_NPVOP E3 ubiquitin-protein ligase IAP-3 OS=Orgyia pseudotsugata
multicapsid polyhedrosis virus GN=IAP3 PE=1 SV=1
Length = 268
Score = 42.4 bits (98), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/123 (26%), Positives = 49/123 (39%), Gaps = 31/123 (25%)
Query: 221 ARWYKYASFGLTIFGAFLIAKRVIRCILQRKRRWELRRRVLAAAAVQRSEQDNEGTNGQA 280
ARWY + L + G + +RV+ A V R + A
Sbjct: 169 ARWYDRCEYVLLVKGRDFV------------------QRVMTEACVVRDADNEPHIERPA 210
Query: 281 ENGSDSTQRDRVMPDLCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVR 333
+ R LC ICL E CGH+ C C++ +T CP+CR ++D+ VR
Sbjct: 211 VEAEVADDR------LCKICLGAEKTVCFVPCGHVVACGKCAAGVTTCPVCRGQLDKAVR 264
Query: 334 TFR 336
++
Sbjct: 265 MYQ 267
>sp|O08863|BIRC3_MOUSE Baculoviral IAP repeat-containing protein 3 OS=Mus musculus
GN=Birc3 PE=1 SV=2
Length = 600
Score = 42.4 bits (98), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query: 296 LCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
+C +C+++E CGHL C C+ L CP+CR I VRTF
Sbjct: 552 MCKVCMDREVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 598
>sp|Q90660|BIR_CHICK Inhibitor of apoptosis protein OS=Gallus gallus GN=ITA PE=2 SV=1
Length = 611
Score = 41.6 bits (96), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
C +C+++E CGHL C C+ L CP+CR I VRTF
Sbjct: 564 CKVCMDKEVSIVFIPCGHLVVCKECAPSLRKCPICRGTIKGTVRTF 609
>sp|Q62210|BIRC2_MOUSE Baculoviral IAP repeat-containing protein 2 OS=Mus musculus
GN=Birc2 PE=1 SV=1
Length = 612
Score = 41.2 bits (95), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
C +C+++E CGHL C C+ L CP+CR I VRTF
Sbjct: 565 CKVCMDREVSIVFIPCGHLVVCQECAPSLRKCPICRGTIKGTVRTF 610
>sp|Q13490|BIRC2_HUMAN Baculoviral IAP repeat-containing protein 2 OS=Homo sapiens
GN=BIRC2 PE=1 SV=2
Length = 618
Score = 41.2 bits (95), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
C +C+++E CGHL C C+ L CP+CR I VRTF
Sbjct: 571 CKVCMDKEVSVVFIPCGHLVVCQECAPSLRKCPICRGIIKGTVRTF 616
>sp|A8MQ27|NEU1B_HUMAN E3 ubiquitin-protein ligase NEURL1B OS=Homo sapiens GN=NEURL1B PE=1
SV=1
Length = 555
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 12/52 (23%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTN-----CPLCRRRIDQVVRTFR 336
C +C + E CGH+C C C RL CP+CRR I V++ +R
Sbjct: 503 CTVCFDGEVDTVIYTCGHMCLCHSCGLRLKRQARACCPICRRPIKDVIKIYR 554
>sp|Q4FE47|XB35_ARATH Putative E3 ubiquitin-protein ligase XBAT35 OS=Arabidopsis thaliana
GN=XBAT35 PE=2 SV=1
Length = 462
Score = 40.8 bits (94), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 297 CVICLEQE-------CGHLCCCLIC----SSRLTNCPLCRRRIDQVVRTFR 336
C ICL+ CGH+ C+ C S+ CP+CR +IDQV++ +R
Sbjct: 411 CAICLDAPSEAVCVPCGHVAGCMSCLKEIKSKNWGCPVCRAKIDQVIKLYR 461
>sp|Q9FPH0|XB34_ARATH Putative E3 ubiquitin-protein ligase XBAT34 OS=Arabidopsis thaliana
GN=XBAT34 PE=2 SV=1
Length = 376
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%), Gaps = 11/51 (21%)
Query: 296 LCVICLEQE-------CGHLCCCLICSSRLTN----CPLCRRRIDQVVRTF 335
LCVIC++ CGH+ C+ C + N CP+CR IDQV++ +
Sbjct: 324 LCVICVDAPSEAVCVPCGHVAGCISCLKEIENKKMGCPVCRANIDQVIKLY 374
>sp|Q0MW30|NEU1B_MOUSE E3 ubiquitin-protein ligase NEURL1B OS=Mus musculus GN=Neurl1b PE=1
SV=1
Length = 546
Score = 40.8 bits (94), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 12/52 (23%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTN-----CPLCRRRIDQVVRTFR 336
C +C + E CGH+C C C RL CP+CRR I V++ +R
Sbjct: 494 CTVCFDSEVDTVIYTCGHMCLCHGCGLRLRRQARACCPICRRPIKDVIKIYR 545
>sp|Q8JHV9|BIR7A_XENLA Baculoviral IAP repeat-containing protein 7-A OS=Xenopus laevis
GN=birc7-a PE=1 SV=1
Length = 401
Score = 40.8 bits (94), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 12/82 (14%)
Query: 262 AAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPD-LCVICLEQE-------CGHLCCCLI 313
A ++RSE E A S Q R+ + +C +C++++ CGHL C
Sbjct: 322 APTRMERSEPPKES----APPLSTEEQLRRLKEERMCKVCMDKDVSMLFVPCGHLVVCTE 377
Query: 314 CSSRLTNCPLCRRRIDQVVRTF 335
C+ L +CP+CR I VR F
Sbjct: 378 CAPNLRHCPICRAAIRGSVRAF 399
>sp|Q95M71|BIRC8_GORGO Baculoviral IAP repeat-containing protein 8 OS=Gorilla gorilla
gorilla GN=BIRC8 PE=2 SV=1
Length = 236
Score = 40.4 bits (93), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 261 LAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQE-------CGHLCCCLI 313
L +A +E ++ T+ Q E + R LC IC+++ CGHL C
Sbjct: 153 LVSAQKDTTENESNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 314 CSSRLTNCPLCRRRIDQVVRTF 335
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCNAVIDFKQRVF 234
>sp|O62640|PIAP_PIG Putative inhibitor of apoptosis OS=Sus scrofa GN=PIAP PE=2 SV=1
Length = 358
Score = 40.4 bits (93), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
C +C+++E CGHL C C+ L CP+CR I VRTF
Sbjct: 311 CKVCMDKEVSIVFIPCGHLVVCKDCAPSLRKCPICRGTIKGTVRTF 356
>sp|A1E2V0|BIRC3_CANFA Baculoviral IAP repeat-containing protein 3 OS=Canis familiaris
GN=BIRC3 PE=2 SV=1
Length = 604
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 7/46 (15%)
Query: 297 CVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
C +C+++E CGHL C C+ L CP+CR + VRTF
Sbjct: 557 CKVCMDKEVSIVFIPCGHLVVCRDCAPSLRKCPICRGTVRGTVRTF 602
>sp|O55756|VF157_IIV6 Putative RING finger protein 157L OS=Invertebrate iridescent virus
6 GN=IIV6-157L PE=3 SV=1
Length = 152
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 29/64 (45%), Gaps = 16/64 (25%)
Query: 274 EGTNGQAENGSDSTQRDRVMPDLCVICLEQE-------CGHLCCCLICSSRLTNCPLCRR 326
E TN + + DS CV+C E E C H C C +RL CP+CR
Sbjct: 97 EATNDKKASSIDSR---------CVVCYENEICIKIQPCNHFVVCKSCFNRLNTCPMCRS 147
Query: 327 RIDQ 330
+I++
Sbjct: 148 KINK 151
>sp|A9ULZ2|BIR7B_XENLA Baculoviral IAP repeat-containing protein 7-B OS=Xenopus laevis
GN=birc7-b PE=2 SV=2
Length = 345
Score = 40.0 bits (92), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 7/47 (14%)
Query: 296 LCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
+C +C++++ CGHL C C+ L +CP+CR I VR F
Sbjct: 297 MCKVCMDKDVSMLFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 343
>sp|Q95M72|BIRC8_PANTR Baculoviral IAP repeat-containing protein 8 OS=Pan troglodytes
GN=BIRC8 PE=2 SV=1
Length = 236
Score = 39.7 bits (91), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 7/82 (8%)
Query: 261 LAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQE-------CGHLCCCLI 313
L +A +E ++ T+ Q E + R LC IC+++ CGHL C
Sbjct: 153 LVSAQKDTTENESNQTSLQREISPEEPLRRLQDEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 314 CSSRLTNCPLCRRRIDQVVRTF 335
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCSAVIDFKQRVF 234
>sp|O60291|MGRN1_HUMAN E3 ubiquitin-protein ligase MGRN1 OS=Homo sapiens GN=MGRN1 PE=1
SV=2
Length = 552
Score = 39.3 bits (90), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 26/63 (41%), Gaps = 13/63 (20%)
Query: 274 EGTNGQAENGSDSTQRDRVMPDLCVICLEQ-------ECGHLCCCLICSSRL----TNCP 322
E N Q SD D + CV+CL C HLC C C+ L NCP
Sbjct: 257 ENKNNQETKPSDDENSDNS--NECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCP 314
Query: 323 LCR 325
+CR
Sbjct: 315 ICR 317
>sp|A9JTP3|BIRC7_XENTR Baculoviral IAP repeat-containing protein 7 OS=Xenopus tropicalis
GN=birc7 PE=2 SV=1
Length = 365
Score = 38.9 bits (89), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 7/47 (14%)
Query: 296 LCVICLEQE-------CGHLCCCLICSSRLTNCPLCRRRIDQVVRTF 335
+C +C++ + CGHL C C+ L +CP+CR I VR F
Sbjct: 317 MCKVCMDNDVSMVFVPCGHLVVCTECAPNLRHCPICRAAIRGSVRAF 363
>sp|Q8BUH7|RNF26_MOUSE Ring finger protein 26 OS=Mus musculus GN=Rnf26 PE=2 SV=1
Length = 424
Score = 38.9 bits (89), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 39/97 (40%), Gaps = 19/97 (19%)
Query: 255 ELRRRVLAAAAVQRSEQDNEG--TNGQAENGSDSTQRDRVMPDLCVICLEQE-------C 305
E V+ A + EQ NE GQ Q +R CVIC +Q C
Sbjct: 330 EAEEEVIRTAPARGREQLNEDEPAAGQDPWKLLKEQEER---KKCVICQDQSKTVLLLPC 386
Query: 306 GHLCCCLICSSRLT-------NCPLCRRRIDQVVRTF 335
HLC C C+ L NCPLCRR I Q + +
Sbjct: 387 RHLCLCQACTEILMRHPVYHRNCPLCRRSILQTLNVY 423
>sp|Q8BVR6|RSPRY_MOUSE RING finger and SPRY domain-containing protein 1 OS=Mus musculus
GN=Rspry1 PE=2 SV=1
Length = 576
Score = 38.9 bits (89), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 51/132 (38%), Gaps = 44/132 (33%)
Query: 216 NLGKWARWYKYA-SFGLTIFG--AFLIAKRVIRCILQRKRRWELRRRVLAAAAVQRSEQD 272
N G AR +KY S + F AFL A+ I IL R RR L ++V
Sbjct: 477 NFG--ARPFKYPPSMKFSTFNDYAFLTAEEKI--ILPRHRRLALLKQV------------ 520
Query: 273 NEGTNGQAENGSDSTQRDRVMPDLCVICLEQ-------ECGHLCCCLICSSRLTNCPLCR 325
+ + C +C ++ CGH C+ C+ +L CPLCR
Sbjct: 521 ------------------SIRENCCSLCCDEVADTQLKPCGHSDLCMDCALQLETCPLCR 562
Query: 326 RRIDQVVRTFRH 337
+ I +R H
Sbjct: 563 KEIVSRIRQISH 574
>sp|Q96P09|BIRC8_HUMAN Baculoviral IAP repeat-containing protein 8 OS=Homo sapiens
GN=BIRC8 PE=1 SV=2
Length = 236
Score = 38.5 bits (88), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 35/82 (42%), Gaps = 7/82 (8%)
Query: 261 LAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDLCVICLEQE-------CGHLCCCLI 313
L +A +E + T+ Q E + R LC IC+++ CGHL C
Sbjct: 153 LVSAQKDTTENELNQTSLQREISPEEPLRRLQEEKLCKICMDRHIAVVFIPCGHLVTCKQ 212
Query: 314 CSSRLTNCPLCRRRIDQVVRTF 335
C+ + CP+C ID R F
Sbjct: 213 CAEAVDRCPMCSAVIDFKQRVF 234
>sp|P29503|NEUR_DROME Protein neuralized OS=Drosophila melanogaster GN=neur PE=1 SV=2
Length = 754
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 37/92 (40%), Gaps = 16/92 (17%)
Query: 260 VLAAAAVQRSEQDNEGTNGQAENGSDSTQRDRVMPDL---CVICLEQE-------CGHLC 309
+++ + Q EQ + A N + D+ D C IC E CGH+C
Sbjct: 661 LISTTSSQYIEQPIANSTNNAANKWKDSLSDQQSTDSSAECTICYENPIDSVLYMCGHMC 720
Query: 310 CCLICSSRL------TNCPLCRRRIDQVVRTF 335
C C+ CPLCR I V+RT+
Sbjct: 721 MCYDCAIEQWRGVGGGQCPLCRAVIRDVIRTY 752
>sp|Q5XIQ4|MGRN1_RAT E3 ubiquitin-protein ligase MGRN1 OS=Rattus norvegicus GN=Mgrn1
PE=2 SV=1
Length = 533
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 13/63 (20%)
Query: 274 EGTNGQAENGSDSTQRDRVMPDLCVICLEQ-------ECGHLCCCLICSSRL----TNCP 322
E N Q SD D CV+CL C HLC C C+ L NCP
Sbjct: 258 ENKNNQETKPSDDENSDNS--SECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCP 315
Query: 323 LCR 325
+CR
Sbjct: 316 ICR 318
>sp|Q9D074|MGRN1_MOUSE E3 ubiquitin-protein ligase MGRN1 OS=Mus musculus GN=Mgrn1 PE=1
SV=2
Length = 532
Score = 38.1 bits (87), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 25/63 (39%), Gaps = 13/63 (20%)
Query: 274 EGTNGQAENGSDSTQRDRVMPDLCVICLEQ-------ECGHLCCCLICSSRL----TNCP 322
E N Q SD D CV+CL C HLC C C+ L NCP
Sbjct: 257 ENKNNQETKPSDDENSDNS--SECVVCLSDLRDTLILPCRHLCLCTSCADTLRYQANNCP 314
Query: 323 LCR 325
+CR
Sbjct: 315 ICR 317
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 126,461,189
Number of Sequences: 539616
Number of extensions: 5405642
Number of successful extensions: 14327
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 54
Number of HSP's successfully gapped in prelim test: 92
Number of HSP's that attempted gapping in prelim test: 14216
Number of HSP's gapped (non-prelim): 168
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)