Query 019653
Match_columns 337
No_of_seqs 237 out of 1763
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 05:03:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019653.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019653hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3oi8_A Uncharacterized protein 99.9 1.1E-26 3.9E-31 196.2 10.0 153 164-322 2-155 (156)
2 3lhh_A CBS domain protein; str 99.9 1.5E-26 5.2E-31 198.6 4.8 160 163-328 5-165 (172)
3 3ocm_A Putative membrane prote 99.9 2.8E-24 9.6E-29 185.2 6.2 145 181-328 13-158 (173)
4 3lv9_A Putative transporter; C 99.9 1.3E-24 4.4E-29 181.4 3.5 144 183-328 2-146 (148)
5 3oco_A Hemolysin-like protein 99.8 5.6E-23 1.9E-27 172.6 -0.1 140 187-328 3-144 (153)
6 3jtf_A Magnesium and cobalt ef 99.8 1.9E-21 6.5E-26 158.6 5.7 125 201-327 2-126 (129)
7 3hf7_A Uncharacterized CBS-dom 99.8 2E-21 6.9E-26 158.9 2.6 124 203-328 1-128 (130)
8 3lfr_A Putative metal ION tran 99.8 1.2E-20 4.1E-25 155.3 6.5 125 202-328 1-128 (136)
9 3i8n_A Uncharacterized protein 99.8 3.6E-21 1.2E-25 157.0 1.5 126 200-327 2-129 (130)
10 3nqr_A Magnesium and cobalt ef 99.8 2.4E-20 8.1E-25 151.5 5.7 124 202-327 1-126 (127)
11 3kxr_A Magnesium transporter, 99.8 1.5E-19 5.2E-24 159.8 10.3 131 186-322 36-169 (205)
12 3k6e_A CBS domain protein; str 99.8 1.8E-20 6E-25 158.6 3.9 128 194-325 4-140 (156)
13 2yvy_A MGTE, Mg2+ transporter 99.7 1.1E-18 3.7E-23 161.1 7.5 137 185-327 116-257 (278)
14 2zy9_A Mg2+ transporter MGTE; 99.7 2.4E-18 8.1E-23 170.3 9.4 150 164-323 110-273 (473)
15 4esy_A CBS domain containing m 99.7 4.3E-18 1.5E-22 145.2 8.7 132 190-328 6-163 (170)
16 3ctu_A CBS domain protein; str 99.7 1.3E-17 4.4E-22 139.8 4.9 125 196-324 7-139 (156)
17 2qrd_G Protein C1556.08C; AMPK 99.7 1.8E-17 6E-22 155.8 6.3 136 185-321 2-166 (334)
18 2emq_A Hypothetical conserved 99.7 2.5E-17 8.6E-22 137.9 5.7 126 195-324 2-136 (157)
19 4gqw_A CBS domain-containing p 99.7 1.4E-17 4.9E-22 138.1 4.1 123 202-326 3-142 (152)
20 3lqn_A CBS domain protein; csg 99.7 1.8E-17 6.1E-22 137.9 3.6 121 199-323 10-139 (150)
21 3kpb_A Uncharacterized protein 99.7 1.6E-17 5.5E-22 133.0 2.9 117 204-324 1-117 (122)
22 2oux_A Magnesium transporter; 99.7 6.8E-17 2.3E-21 149.8 6.7 133 185-323 118-255 (286)
23 3k2v_A Putative D-arabinose 5- 99.7 4.5E-17 1.5E-21 135.7 4.2 117 204-323 28-148 (149)
24 3gby_A Uncharacterized protein 99.6 9.6E-17 3.3E-21 130.1 5.2 117 202-323 3-122 (128)
25 3sl7_A CBS domain-containing p 99.6 5.8E-17 2E-21 138.5 3.7 119 203-323 3-152 (180)
26 2v8q_E 5'-AMP-activated protei 99.6 3.9E-17 1.3E-21 153.3 2.7 139 182-323 15-173 (330)
27 2yzi_A Hypothetical protein PH 99.6 1.7E-16 5.7E-21 130.0 6.1 122 199-325 2-127 (138)
28 2ef7_A Hypothetical protein ST 99.6 1.3E-16 4.3E-21 129.9 5.2 118 201-323 1-121 (133)
29 2rih_A Conserved protein with 99.6 2.2E-16 7.5E-21 130.0 6.2 117 204-325 5-126 (141)
30 3fhm_A Uncharacterized protein 99.6 1.2E-16 4.2E-21 135.4 4.4 130 196-328 16-151 (165)
31 2rc3_A CBS domain; in SITU pro 99.6 1.2E-16 4.2E-21 130.4 3.4 120 205-328 7-132 (135)
32 4fxs_A Inosine-5'-monophosphat 99.6 2.3E-16 7.7E-21 156.8 5.1 148 163-324 52-206 (496)
33 1pvm_A Conserved hypothetical 99.6 5.4E-16 1.8E-20 133.8 6.8 119 204-326 9-132 (184)
34 3t4n_C Nuclear protein SNF4; C 99.6 9.4E-17 3.2E-21 150.1 2.0 139 183-322 8-172 (323)
35 1yav_A Hypothetical protein BS 99.6 1.7E-16 5.8E-21 133.5 3.2 120 200-323 10-138 (159)
36 2p9m_A Hypothetical protein MJ 99.6 5.1E-16 1.8E-20 126.9 5.3 119 201-323 5-132 (138)
37 3org_A CMCLC; transporter, tra 99.6 5.2E-16 1.8E-20 158.7 5.5 125 202-330 451-627 (632)
38 3fv6_A YQZB protein; CBS domai 99.6 9.1E-16 3.1E-20 129.2 6.0 118 201-323 14-140 (159)
39 1y5h_A Hypothetical protein RV 99.6 3.6E-16 1.2E-20 127.1 2.6 121 202-327 6-131 (133)
40 1pbj_A Hypothetical protein; s 99.6 4.4E-16 1.5E-20 125.0 2.5 118 204-327 1-122 (125)
41 1o50_A CBS domain-containing p 99.6 1.5E-15 5.1E-20 127.5 5.1 119 200-324 12-150 (157)
42 2o16_A Acetoin utilization pro 99.6 1.2E-15 4E-20 128.8 4.3 117 202-323 3-131 (160)
43 2nyc_A Nuclear protein SNF4; b 99.6 5.6E-16 1.9E-20 127.3 1.6 122 201-326 5-140 (144)
44 1zfj_A Inosine monophosphate d 99.6 4.2E-15 1.4E-19 147.7 7.8 146 164-323 54-207 (491)
45 4fry_A Putative signal-transdu 99.5 1.3E-15 4.6E-20 127.6 3.3 119 204-326 7-134 (157)
46 2j9l_A Chloride channel protei 99.5 1.5E-15 5.1E-20 130.3 3.7 119 202-323 9-161 (185)
47 2uv4_A 5'-AMP-activated protei 99.5 2.1E-15 7.2E-20 125.9 3.7 118 201-324 20-148 (152)
48 3ddj_A CBS domain-containing p 99.5 2.7E-15 9.2E-20 138.5 4.6 145 164-323 64-210 (296)
49 3usb_A Inosine-5'-monophosphat 99.5 5.9E-15 2E-19 147.1 6.1 146 164-323 77-230 (511)
50 2pfi_A Chloride channel protei 99.5 3.1E-15 1.1E-19 125.7 3.1 124 196-323 5-143 (164)
51 1me8_A Inosine-5'-monophosphat 99.5 3E-15 1E-19 149.1 2.2 151 164-327 61-221 (503)
52 3kh5_A Protein MJ1225; AMPK, A 99.5 5E-15 1.7E-19 134.9 3.2 148 164-323 51-201 (280)
53 1vr9_A CBS domain protein/ACT 99.5 3.2E-14 1.1E-18 126.0 7.7 115 204-324 13-127 (213)
54 2cu0_A Inosine-5'-monophosphat 99.5 4.6E-15 1.6E-19 147.3 1.8 144 164-324 57-205 (486)
55 3l2b_A Probable manganase-depe 99.5 2.7E-14 9.2E-19 128.7 6.4 118 203-324 6-241 (245)
56 4avf_A Inosine-5'-monophosphat 99.5 4.5E-15 1.5E-19 147.3 1.3 147 163-324 51-204 (490)
57 3kh5_A Protein MJ1225; AMPK, A 99.5 6.7E-14 2.3E-18 127.4 7.4 115 205-322 4-137 (280)
58 3t4n_C Nuclear protein SNF4; C 99.4 3.3E-14 1.1E-18 132.8 3.2 125 200-328 183-321 (323)
59 2yzq_A Putative uncharacterize 99.4 5.1E-14 1.7E-18 128.6 3.5 114 204-323 1-114 (282)
60 3ddj_A CBS domain-containing p 99.4 5.2E-14 1.8E-18 129.8 2.4 120 201-324 153-282 (296)
61 3pc3_A CG1753, isoform A; CBS, 99.4 9E-14 3.1E-18 139.3 3.8 122 201-327 381-511 (527)
62 2yzq_A Putative uncharacterize 99.4 1.1E-12 3.7E-17 119.7 9.3 117 202-322 58-179 (282)
63 2qrd_G Protein C1556.08C; AMPK 99.3 8.8E-13 3E-17 123.6 4.5 122 202-327 180-315 (334)
64 2d4z_A Chloride channel protei 99.3 1.6E-12 5.4E-17 118.1 2.9 120 200-323 9-242 (250)
65 2v8q_E 5'-AMP-activated protei 99.2 3.5E-12 1.2E-16 119.4 5.1 118 204-324 190-320 (330)
66 1vrd_A Inosine-5'-monophosphat 99.2 1.6E-12 5.5E-17 129.2 1.3 126 191-326 87-214 (494)
67 1jcn_A Inosine monophosphate d 99.1 5E-12 1.7E-16 126.2 0.7 118 205-325 109-231 (514)
68 4af0_A Inosine-5'-monophosphat 99.1 2.7E-11 9.2E-16 118.9 1.7 126 189-324 128-255 (556)
69 1vr9_A CBS domain protein/ACT 98.8 1.1E-09 3.9E-14 96.5 0.5 103 204-311 72-175 (213)
70 3ghd_A A cystathionine beta-sy 98.7 3.8E-08 1.3E-12 71.3 6.8 64 216-282 2-70 (70)
71 3fio_A A cystathionine beta-sy 98.6 6.6E-08 2.2E-12 69.1 6.9 63 216-281 2-69 (70)
72 3l2b_A Probable manganase-depe 98.4 8.8E-08 3E-12 85.7 3.9 60 202-264 183-242 (245)
73 4esy_A CBS domain containing m 98.3 3.7E-07 1.3E-11 76.9 4.5 60 201-265 102-161 (170)
74 4fry_A Putative signal-transdu 98.3 5.1E-07 1.7E-11 74.8 4.9 59 201-264 75-133 (157)
75 3fv6_A YQZB protein; CBS domai 98.2 1E-06 3.6E-11 73.2 5.6 62 200-263 77-141 (159)
76 3kpb_A Uncharacterized protein 98.2 1.4E-06 4.9E-11 68.6 5.9 59 202-264 60-118 (122)
77 3usb_A Inosine-5'-monophosphat 98.2 2.2E-06 7.6E-11 85.2 7.0 130 200-333 171-302 (511)
78 1pbj_A Hypothetical protein; s 98.2 1.6E-06 5.4E-11 68.5 4.6 60 200-264 61-120 (125)
79 2ef7_A Hypothetical protein ST 98.1 2.3E-06 7.9E-11 68.5 5.6 58 203-264 66-123 (133)
80 1pvm_A Conserved hypothetical 98.1 4.9E-06 1.7E-10 70.9 7.6 60 201-264 72-131 (184)
81 4gqw_A CBS domain-containing p 98.1 1.7E-06 5.8E-11 70.6 4.5 61 200-264 81-141 (152)
82 2rc3_A CBS domain; in SITU pro 98.1 3.3E-06 1.1E-10 67.9 6.1 59 201-264 71-129 (135)
83 3lhh_A CBS domain protein; str 98.1 6.7E-06 2.3E-10 69.4 8.2 58 202-264 105-162 (172)
84 3lfr_A Putative metal ION tran 98.1 3.2E-06 1.1E-10 68.4 5.9 59 201-264 67-125 (136)
85 1me8_A Inosine-5'-monophosphat 98.1 3.1E-07 1.1E-11 91.2 -0.3 126 202-332 159-288 (503)
86 3jtf_A Magnesium and cobalt ef 98.1 4.2E-06 1.4E-10 67.0 6.3 57 202-263 67-123 (129)
87 3lv9_A Putative transporter; C 98.1 5.9E-06 2E-10 67.6 7.3 56 203-263 87-142 (148)
88 3oco_A Hemolysin-like protein 98.1 6.1E-06 2.1E-10 68.0 7.0 58 202-264 84-141 (153)
89 1o50_A CBS domain-containing p 98.1 3.4E-06 1.2E-10 69.9 5.4 60 200-264 92-151 (157)
90 3nqr_A Magnesium and cobalt ef 98.1 3.9E-06 1.3E-10 66.9 5.3 58 202-264 67-124 (127)
91 2nyc_A Nuclear protein SNF4; b 98.1 4.8E-06 1.6E-10 67.3 6.0 61 201-263 74-138 (144)
92 3sl7_A CBS domain-containing p 98.1 2.5E-06 8.6E-11 71.8 4.2 60 200-263 94-153 (180)
93 3i8n_A Uncharacterized protein 98.0 7E-06 2.4E-10 65.7 6.5 57 202-263 70-126 (130)
94 3gby_A Uncharacterized protein 98.0 3E-06 1E-10 67.6 4.3 57 204-264 68-124 (128)
95 3fhm_A Uncharacterized protein 98.0 6.3E-06 2.2E-10 68.8 6.3 61 200-265 89-149 (165)
96 2rih_A Conserved protein with 98.0 6E-06 2.1E-10 66.9 5.9 57 202-263 69-125 (141)
97 2uv4_A 5'-AMP-activated protei 98.0 4.8E-06 1.7E-10 68.5 5.3 60 202-263 85-148 (152)
98 1y5h_A Hypothetical protein RV 98.0 4.3E-06 1.5E-10 66.9 4.6 59 201-264 71-129 (133)
99 3oi8_A Uncharacterized protein 98.0 5.4E-06 1.9E-10 68.7 5.1 56 202-262 101-156 (156)
100 3lqn_A CBS domain protein; csg 98.0 1E-05 3.6E-10 66.1 6.7 58 201-264 84-141 (150)
101 3k2v_A Putative D-arabinose 5- 98.0 5.1E-06 1.7E-10 68.1 4.6 57 201-262 92-148 (149)
102 3hf7_A Uncharacterized CBS-dom 98.0 8.6E-06 2.9E-10 65.3 5.7 57 202-263 68-124 (130)
103 3kxr_A Magnesium transporter, 98.0 7.9E-06 2.7E-10 71.4 5.7 60 201-264 113-172 (205)
104 2p9m_A Hypothetical protein MJ 97.9 4.9E-06 1.7E-10 66.9 3.8 59 201-263 70-133 (138)
105 3k6e_A CBS domain protein; str 97.9 4.7E-06 1.6E-10 69.5 3.1 58 201-264 83-140 (156)
106 2o16_A Acetoin utilization pro 97.9 9.6E-06 3.3E-10 67.4 4.8 58 201-263 75-132 (160)
107 2yzi_A Hypothetical protein PH 97.9 2.5E-05 8.4E-10 62.8 6.5 59 201-264 69-127 (138)
108 2emq_A Hypothetical conserved 97.8 1.7E-05 5.9E-10 65.2 5.6 58 201-264 80-137 (157)
109 2j9l_A Chloride channel protei 97.8 2E-05 6.8E-10 66.6 5.5 59 201-264 105-163 (185)
110 1yav_A Hypothetical protein BS 97.8 1.7E-05 5.9E-10 65.6 4.7 57 201-263 83-139 (159)
111 3ctu_A CBS domain protein; str 97.8 1.5E-05 5E-10 65.7 3.6 57 202-264 84-140 (156)
112 4avf_A Inosine-5'-monophosphat 97.7 8.9E-06 3E-10 80.5 2.1 102 202-307 145-248 (490)
113 2yvy_A MGTE, Mg2+ transporter 97.7 2.9E-05 1E-09 70.8 5.2 61 201-265 196-256 (278)
114 4fxs_A Inosine-5'-monophosphat 97.6 9E-06 3.1E-10 80.5 0.9 61 202-264 147-207 (496)
115 2oux_A Magnesium transporter; 97.6 3.5E-05 1.2E-09 70.7 4.5 60 201-264 198-257 (286)
116 1vrd_A Inosine-5'-monophosphat 97.6 1.3E-05 4.6E-10 79.2 1.2 101 202-305 153-255 (494)
117 2pfi_A Chloride channel protei 97.6 4.2E-05 1.4E-09 63.1 4.1 59 202-263 82-144 (164)
118 3ocm_A Putative membrane prote 97.6 7.5E-05 2.6E-09 63.2 5.6 57 202-264 99-155 (173)
119 3org_A CMCLC; transporter, tra 97.5 7.3E-05 2.5E-09 76.2 5.4 56 205-265 569-624 (632)
120 2zy9_A Mg2+ transporter MGTE; 97.5 8.8E-05 3E-09 73.0 5.3 60 201-264 216-275 (473)
121 2cu0_A Inosine-5'-monophosphat 97.3 5.7E-05 1.9E-09 74.6 1.9 97 202-308 148-248 (486)
122 1jcn_A Inosine monophosphate d 97.2 0.00026 8.9E-09 70.3 4.9 98 202-303 171-271 (514)
123 4af0_A Inosine-5'-monophosphat 97.2 5.8E-05 2E-09 74.3 0.1 124 202-332 198-326 (556)
124 1zfj_A Inosine monophosphate d 97.1 0.00059 2E-08 67.2 6.5 102 202-308 150-253 (491)
125 2d4z_A Chloride channel protei 97.1 0.00072 2.5E-08 60.8 6.3 52 208-264 193-244 (250)
126 3fio_A A cystathionine beta-sy 97.0 0.00014 4.9E-09 51.2 0.4 47 278-325 1-47 (70)
127 3pc3_A CG1753, isoform A; CBS, 96.7 0.0014 4.9E-08 65.1 5.2 69 191-264 435-509 (527)
128 3ghd_A A cystathionine beta-sy 96.6 0.00043 1.5E-08 49.6 0.6 46 279-325 2-47 (70)
129 3arc_L Photosystem II reaction 31.8 50 0.0017 19.8 3.1 18 12-29 18-35 (37)
130 2jaf_A Halorhodopsin, HR; chro 26.8 3.3E+02 0.011 24.0 11.8 39 109-149 178-216 (274)
131 1p0z_A Sensor kinase CITA; tra 20.5 49 0.0017 25.3 2.2 21 240-261 105-125 (131)
No 1
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=99.93 E-value=1.1e-26 Score=196.21 Aligned_cols=153 Identities=22% Similarity=0.351 Sum_probs=139.2
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEE
Q 019653 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (337)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV 243 (337)
.+|++||+.+++. +.++|.++++|++++++++++.+.+|+|+|+|+.+++++++++++. ++++.|.+++++++||
T Consensus 2 ~~t~~el~~li~~----~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~i~-~a~~~m~~~~~~~~pV 76 (156)
T 3oi8_A 2 NASAEDVLNLLRQ----AHEQEVFDADTLLRLEKVLDFSDLEVRDAMITRSRMNVLKENDSIE-RITAYVIDTAHSRFPV 76 (156)
T ss_dssp CCCHHHHHHHHHH----HHHTTSSCHHHHHHHHHHHHHTTCBGGGTCEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEE
T ss_pred CCCHHHHHHHHHh----HHhcCCcCHHHHHHHHHHhccCCCCHhheeeeHHHeEEECCCCCHH-HHHHHHHHCCCCEEEE
Confidence 4799999999984 5567999999999999999999999999999988999999999998 9999999999999999
Q ss_pred EcCCCCcEeEEeEhhhhhhcCCC-CCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCc
Q 019653 244 YYEEPTNIIGLILVKNLLTIHPE-DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPAS 322 (337)
Q Consensus 244 ~~~~~~~ivGiv~~kDll~~~~~-~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~ 322 (337)
++++.++++|+|+.+|++..... .+.+++++| +++.++++++++.++++.|++++.+.++|+|++|+..|++|+.|.+
T Consensus 77 vd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~~Vvd~~g~~~Givt~~Dil 155 (156)
T 3oi8_A 77 IGEDKDEVLGILHAKDLLKYMFNPEQFHLKSIL-RPAVFVPEGKSLTALLKEFREQRNHMAIVIDEYGGTSGLVTFEDII 155 (156)
T ss_dssp ESSSTTCEEEEEEGGGGGGGSSCGGGCCHHHHC-BCCCEEETTSBHHHHHHHHHHTTCCEEEEECTTSSEEEEEEHHHHC
T ss_pred EcCCCCcEEEEEEHHHHHHHHHcCCcccHHHHc-CCCEEECCCCCHHHHHHHHHhcCCeEEEEECCCCCEEEEEEHHHhc
Confidence 98764699999999999987543 456788985 7789999999999999999999999999999999999999987754
No 2
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=99.92 E-value=1.5e-26 Score=198.65 Aligned_cols=160 Identities=23% Similarity=0.410 Sum_probs=111.2
Q ss_pred ccccHHHHHHHHHhhcccccCCCCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEE
Q 019653 163 ALFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVP 242 (337)
Q Consensus 163 ~~~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~P 242 (337)
..+|++||+.+++ ++.+.|.++++|++++++++++.+.+|+|+|+|+.+++++++++++. ++++.|.+++++++|
T Consensus 5 ~~~t~~el~~l~~----~~~~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~p 79 (172)
T 3lhh_A 5 DNVTQEDIQAMLQ----EGSSAGVIEHNEHAMVKNVFRLDERTISSLMVPRSDIVFLDLNLPLD-ANLRTVMQSPHSRFP 79 (172)
T ss_dssp ------------------------------------------CTTTTSEEGGGCCCEETTSCHH-HHHHHHHTCCCSEEE
T ss_pred ccCCHHHHHHHHH----HHHHcCCCCHHHHHHHHHHhccCCCCHHHhCccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEE
Confidence 4689999999998 45677999999999999999999999999999998999999999998 999999999999999
Q ss_pred EEcCCCCcEeEEeEhhhhhhcCC-CCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCC
Q 019653 243 VYYEEPTNIIGLILVKNLLTIHP-EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPA 321 (337)
Q Consensus 243 V~~~~~~~ivGiv~~kDll~~~~-~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~ 321 (337)
|++++.++++|+|+.+|++.... +.+.+++++| +++.++++++++.++++.|++++.+.++|+|++|+..|++|+.|.
T Consensus 80 Vvd~~~~~lvGivt~~dl~~~~~~~~~~~v~~im-~~~~~v~~~~~l~~a~~~m~~~~~~~~pVvd~~g~lvGiit~~Di 158 (172)
T 3lhh_A 80 VCRNNVDDMVGIISAKQLLSESIAGERLELVDLV-KNCNFVPNSLSGMELLEHFRTTGSQMVFVVDEYGDLKGLVTLQDM 158 (172)
T ss_dssp EESSSTTSEEEEEEHHHHHHHHHTTCCCCGGGGC-BCCEEEETTCCHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred EEeCCCCeEEEEEEHHHHHHHHhhcCcccHHHHh-cCCeEeCCCCCHHHHHHHHHHcCCeEEEEEeCCCCEEEEeeHHHH
Confidence 99875579999999999997543 2356799997 999999999999999999999999999999999999999999988
Q ss_pred ccccCCC
Q 019653 322 SKSAYGR 328 (337)
Q Consensus 322 ~~~~~~~ 328 (337)
++..+|.
T Consensus 159 l~~l~~~ 165 (172)
T 3lhh_A 159 MDALTGE 165 (172)
T ss_dssp HHHHHTT
T ss_pred HHHHhCC
Confidence 8776664
No 3
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=99.89 E-value=2.8e-24 Score=185.16 Aligned_cols=145 Identities=16% Similarity=0.257 Sum_probs=127.4
Q ss_pred ccCCCCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhh
Q 019653 181 AGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNL 260 (337)
Q Consensus 181 ~~~~g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDl 260 (337)
+.++|.++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+
T Consensus 13 ~~~~g~l~~~e~~~i~~~l~l~~~~v~diM~~~~~v~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~lvGivt~~Dl 91 (173)
T 3ocm_A 13 MPAVPAFGVEERNMVSGVLTLAERSIRSIMTPRTDVSWVNIDDDAA-TIRQQLTAAPHSFFPVCRGSLDEVVGIGRAKDL 91 (173)
T ss_dssp -----CCCHHHHHHHHHHHHHTTSCSTTTSEEGGGCCCEETTSCHH-HHHHHHHHSSCSEEEEESSSTTSEEEEEEHHHH
T ss_pred HHhcCCcCHHHHHHHHHHhccCCCCHHHhCCcHHHeEEEeCCCCHH-HHHHHHHhCCCCEEEEEeCCCCCEEEEEEHHHH
Confidence 3456999999999999999999999999999999999999999998 999999999999999998755799999999999
Q ss_pred hhcCC-CCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCC
Q 019653 261 LTIHP-EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGR 328 (337)
Q Consensus 261 l~~~~-~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~ 328 (337)
+.... ....++. |++++.++++++++.++++.|++++.+.++|+|++|+..|++|++|.++..+|+
T Consensus 92 ~~~~~~~~~~~v~--~~~~~~~v~~~~~l~~al~~m~~~~~~~~~Vvde~g~lvGiIT~~Dil~~l~~~ 158 (173)
T 3ocm_A 92 VADLITEGRVRRN--RLRDPIIVHESIGILRLMDTLKRSRGQLVLVADEFGAIEGLVTPIDVFEAIAGE 158 (173)
T ss_dssp HHHHHHHSSCCGG--GSBCCCEECGGGCHHHHHHHHHHSTTCCEEEECTTCCEEEEECHHHHHHHHHCC
T ss_pred HHHHhcCCcchhH--hcCCCeEECCCCcHHHHHHHHHHcCCeEEEEEeCCCCEEEEEeHHHHHHHHhCc
Confidence 97532 1245677 579999999999999999999999999999999999999999998887776664
No 4
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=99.89 E-value=1.3e-24 Score=181.40 Aligned_cols=144 Identities=19% Similarity=0.392 Sum_probs=116.3
Q ss_pred CCCCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhh
Q 019653 183 KGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 262 (337)
Q Consensus 183 ~~g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~ 262 (337)
++|.++++|++++++++++.+.+|+|+|+|+.+++++++++++. ++++.|.+++++++||+|++.++++|+|+.+|++.
T Consensus 2 ~~g~l~~~e~~~i~~~~~l~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~lvGivt~~dl~~ 80 (148)
T 3lv9_A 2 NAGLIDESEQRLVDNIFEFEEKKIREIMVPRTDMVCIYESDSEE-KILAILKEEGVTRYPVCRKNKDDILGFVHIRDLYN 80 (148)
T ss_dssp ----------------CGGGTCBGGGTSEETTTCCCEETTCCHH-HHHHHHHHSCCSEEEEESSSTTSEEEEEEHHHHHH
T ss_pred CCCccCHHHHHHHHHHhccCCCCHHHccccHHHeEEECCCCCHH-HHHHHHHHCCCCEEEEEcCCCCcEEEEEEHHHHHH
Confidence 35899999999999999999999999999998999999999998 99999999999999999875479999999999997
Q ss_pred cCCCC-CCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCC
Q 019653 263 IHPED-EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGR 328 (337)
Q Consensus 263 ~~~~~-~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~ 328 (337)
....+ +.+++++| +++.++++++++.++++.|.+++.+.++|+|++|...|++|++|.++..+|+
T Consensus 81 ~~~~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~~~ 146 (148)
T 3lv9_A 81 QKINENKIELEEIL-RDIIYISENLTIDKALERIRKEKLQLAIVVDEYGGTSGVVTIEDILEEIVGE 146 (148)
T ss_dssp HHHHHSCCCGGGTC-BCCEEEETTSBHHHHHHHHHHHTCSEEEEECTTSSEEEEEEHHHHHHHHHHT
T ss_pred HHhcCCCccHHHhc-CCCeEECCCCCHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCc
Confidence 53222 56799997 9999999999999999999999999999999999999999999887766553
No 5
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=99.85 E-value=5.6e-23 Score=172.62 Aligned_cols=140 Identities=21% Similarity=0.408 Sum_probs=122.3
Q ss_pred CCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEE-cCCCCcEeEEeEhhhhhhcCC
Q 019653 187 LTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVY-YEEPTNIIGLILVKNLLTIHP 265 (337)
Q Consensus 187 l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~-~~~~~~ivGiv~~kDll~~~~ 265 (337)
++++|++++++++++.+.+|+++|+|+.+++++++++++. ++++.|.+++++++||+ +++.++++|+|+.+|++....
T Consensus 3 l~~~e~~~i~~~~~l~~~~v~~iM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVv~d~~~~~lvGivt~~dl~~~~~ 81 (153)
T 3oco_A 3 ADEEDANFMQRAFEMNDKVASDVMVDRTSMSVVDVDETIA-DALLLYLEEQYSRFPVTADNDKDKIIGYAYNYDIVRQAR 81 (153)
T ss_dssp -----CCHHHHHHHHHHCBHHHHSEEGGGCCCEETTSBHH-HHHHHHHHHCCSEEEEEETTEEEEEEEEEEHHHHHHHHH
T ss_pred cCHHHHHHHHHhcccCCCEeeeEecchhheEEEcCCCCHH-HHHHHHHhCCCCEEEEEECCCCCcEEEEEEHHHHHhHHh
Confidence 6778999999999999999999999988999999999998 99999999999999999 654479999999999997532
Q ss_pred -CCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCC
Q 019653 266 -EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGR 328 (337)
Q Consensus 266 -~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~ 328 (337)
....+++++| +++.++++++++.++++.|.+++.+.++|+|++|...|++|++|.++..+|+
T Consensus 82 ~~~~~~v~~~m-~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd~~g~~vGivt~~dil~~l~~~ 144 (153)
T 3oco_A 82 IDDKAKISTIM-RDIVSVPENMKVPDVMEEMSAHRVPMAIVIDEYGGTSGIITDKDVYEELFGN 144 (153)
T ss_dssp HHTTSBGGGTC-BCCEEEETTSBHHHHHHHHHHTTCSCEEEECTTSCEEEEECHHHHHHHHHC-
T ss_pred cCCCCcHHHHh-CCCeEECCCCCHHHHHHHHHHcCCcEEEEEeCCCCEEEEeeHHHHHHHHhcc
Confidence 2256799997 9999999999999999999999999999999999999999999887776664
No 6
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=99.83 E-value=1.9e-21 Score=158.59 Aligned_cols=125 Identities=30% Similarity=0.484 Sum_probs=111.0
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccCc
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP 280 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~~ 280 (337)
.++.+|+|+|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++....++.+++++| +++.
T Consensus 2 ~~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~v~~~m-~~~~ 79 (129)
T 3jtf_A 2 NAERTVADIMVPRSRMDLLDISQPLP-QLLATIIETAHSRFPVYEDDRDNIIGILLAKDLLRYMLEPALDIRSLV-RPAV 79 (129)
T ss_dssp --CCBHHHHCEEGGGCCCEETTSCHH-HHHHHHHHSCCSEEEEESSSTTCEEEEEEGGGGGGGGTCTTSCGGGGC-BCCC
T ss_pred CCCCCHHHhCccHHHeEEECCCCCHH-HHHHHHHHcCCCEEEEEcCCCCcEEEEEEHHHHHhHhccCCcCHHHHh-CCCe
Confidence 46789999999999999999999998 999999999999999998755799999999999986555567889984 7889
Q ss_pred eeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCC
Q 019653 281 RVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYG 327 (337)
Q Consensus 281 ~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~ 327 (337)
++++++++.++++.|.+++.+.++|+|++|+..|++|++|.++..+|
T Consensus 80 ~v~~~~~l~~~~~~m~~~~~~~~pVvd~~g~~~Giit~~Dil~~l~g 126 (129)
T 3jtf_A 80 FIPEVKRLNVLLREFRASRNHLAIVIDEHGGISGLVTMEDVLEQIVG 126 (129)
T ss_dssp EEETTCBHHHHHHHHHTSSCCEEEEECC-CCEEEEEEHHHHHHHHHH
T ss_pred EeCCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 99999999999999999999999999999999999999988776555
No 7
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=99.82 E-value=2e-21 Score=158.87 Aligned_cols=124 Identities=22% Similarity=0.345 Sum_probs=109.7
Q ss_pred ccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCC----CCCcccccccc
Q 019653 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED----EVPVKSVTIRR 278 (337)
Q Consensus 203 ~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~----~~~v~~i~~~~ 278 (337)
+++|+|+|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+++.+|+++....+ ..+++++| ++
T Consensus 1 ~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVv~~~~~~lvGivt~~dl~~~~~~~~~~~~~~v~~~m-~~ 78 (130)
T 3hf7_A 1 KVSVNDIMVPRNEIVGIDINDDWK-SIVRQLTHSPHGRIVLYRDSLDDAISMLRVREAYRLMTEKKEFTKEIMLRAA-DE 78 (130)
T ss_dssp CCBHHHHSEEGGGCCEEETTSCHH-HHHHHHHTCSSSEEEEESSSGGGEEEEEEHHHHHHHHTSSSCCCHHHHHHHS-BC
T ss_pred CcCHHHhCccHHHEEEEcCCCCHH-HHHHHHHHCCCCeEEEEcCCCCcEEEEEEHHHHHHHHhccCccchhhHHHhc-cC
Confidence 368999999998999999999998 9999999999999999976558999999999999764332 23578885 89
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCC
Q 019653 279 IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGR 328 (337)
Q Consensus 279 ~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~ 328 (337)
+.++++++++.++++.|++++.+.++|+||+|...|++|++|.++..+|+
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~g~ 128 (130)
T 3hf7_A 79 IYFVPEGTPLSTQLVKFQRNKKKVGLVVDEYGDIQGLVTVEDILEEIVGD 128 (130)
T ss_dssp CCEEETTCBHHHHHHHHHHHCCCEEEEECTTSCEEEEEEHHHHHHHHHC-
T ss_pred CeEeCCCCcHHHHHHHHHhcCCeEEEEEcCCCCEEEEeeHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999988776664
No 8
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=99.81 E-value=1.2e-20 Score=155.32 Aligned_cols=125 Identities=28% Similarity=0.450 Sum_probs=109.4
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC---CCCCCcccccccc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIRR 278 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~---~~~~~v~~i~~~~ 278 (337)
++.+|+|+|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++... ..+.+++++| ++
T Consensus 1 ~~~~v~~iM~~~~~~~~v~~~~~v~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~~v~~~m-~~ 78 (136)
T 3lfr_A 1 ADLQVRDIMVPRSQMISIKATQTPR-EFLPAVIDAAHSRYPVIGESHDDVLGVLLAKDLLPLILKADGDSDDVKKLL-RP 78 (136)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGGSSSGGGCCGGGTC-BC
T ss_pred CCCChHhccccHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHHhccCCCcCHHHHc-CC
Confidence 3678999999998999999999998 99999999999999999875479999999999997542 2346789985 77
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCC
Q 019653 279 IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGR 328 (337)
Q Consensus 279 ~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~ 328 (337)
+.++++++++.++++.|++++.+.++|+|++|+..|++|++|.++..+|+
T Consensus 79 ~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~lvGiit~~Dil~~l~~~ 128 (136)
T 3lfr_A 79 ATFVPESKRLNVLLREFRANHNHMAIVIDEYGGVAGLVTIEDVLEQIVGD 128 (136)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHTTC---
T ss_pred CeEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhCC
Confidence 89999999999999999999999999999999999999999988887764
No 9
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=99.80 E-value=3.6e-21 Score=156.99 Aligned_cols=126 Identities=21% Similarity=0.320 Sum_probs=109.0
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC--CCCCCccccccc
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP--EDEVPVKSVTIR 277 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~--~~~~~v~~i~~~ 277 (337)
+|.+.+|+|+|+|+.+++++++++++. ++++.|.+++++++||+|++.++++|+|+.+|++.... ..+.+++++| +
T Consensus 2 ~l~~~~v~~iM~~~~~v~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~~Givt~~dl~~~~~~~~~~~~v~~~m-~ 79 (130)
T 3i8n_A 2 NAQDVPVTQVMTPRPVVFRVDATMTIN-EFLDKHKDTPFSRPLVYSEQKDNIIGFVHRLELFKMQQSGSGQKQLGAVM-R 79 (130)
T ss_dssp -----CCTTTSCCBCCCCEEETTSBHH-HHHHHTTTCSCSCCEEESSSTTCEEEECCHHHHHHHHHTTTTTSBHHHHS-E
T ss_pred CcCcCCHhhCCCcHHHEEEEcCCCCHH-HHHHHHHhCCCCEEEEEeCCCCcEEEEEEHHHHHHHHhcCCCcCCHHHHh-c
Confidence 467899999999998999999999998 99999999999999999875579999999999997532 2356788986 8
Q ss_pred cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCC
Q 019653 278 RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYG 327 (337)
Q Consensus 278 ~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~ 327 (337)
++.++++++++.++++.|.+++.+.++|+||+|...|++|++|.++..+|
T Consensus 80 ~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~g~~vGivt~~dil~~l~g 129 (130)
T 3i8n_A 80 PIQVVLNNTALPKVFDQMMTHRLQLALVVDEYGTVLGLVTLEDIFEHLVG 129 (130)
T ss_dssp ECCEEETTSCHHHHHHHHHHHTCCEEEEECTTSCEEEEEEHHHHHHHHHT
T ss_pred CCcCcCCCCcHHHHHHHHHHcCCeEEEEEcCCCCEEEEEEHHHHHHHHcC
Confidence 89999999999999999999999999999999999999999988776555
No 10
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=99.80 E-value=2.4e-20 Score=151.50 Aligned_cols=124 Identities=27% Similarity=0.461 Sum_probs=108.5
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC--CCCCCccccccccC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP--EDEVPVKSVTIRRI 279 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~--~~~~~v~~i~~~~~ 279 (337)
++.+|+|+|+|+.+++++++++++. ++++.|.+++++++||++++.++++|+|+.+|+++... ..+.+++++| +++
T Consensus 1 ~~~~v~diM~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~~~~~vGivt~~dl~~~~~~~~~~~~v~~~m-~~~ 78 (127)
T 3nqr_A 1 ADQRVRDIMIPRSQMITLKRNQTLD-ECLDVIIESAHSRFPVISEDKDHIEGILMAKDLLPFMRSDAEAFSMDKVL-RTA 78 (127)
T ss_dssp --CBHHHHSEEGGGCCCEETTCCHH-HHHHHHHHHCCSEEEEESSSTTCEEEEEEGGGGGGGGSTTCCCCCHHHHC-BCC
T ss_pred CCcCHHHhcccHHHeEEEcCCCCHH-HHHHHHHhCCCCEEEEEcCCCCcEEEEEEHHHHHHHHhccCCCCCHHHHc-CCC
Confidence 3678999999988899999999998 99999999999999999875479999999999997542 2356788985 778
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCC
Q 019653 280 PRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYG 327 (337)
Q Consensus 280 ~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~ 327 (337)
.++++++++.++++.|.+++.+.++|+|++|...|++|++|.++..+|
T Consensus 79 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Giit~~dll~~l~g 126 (127)
T 3nqr_A 79 VVVPESKRVDRMLKEFRSQRYHMAIVIDEFGGVSGLVTIEDILELIVG 126 (127)
T ss_dssp CEEETTCBHHHHHHHHHHTTCCEEEEECTTSCEEEEEEHHHHHHHC--
T ss_pred eEECCCCcHHHHHHHHHhcCCeEEEEEeCCCCEEEEEEHHHHHHHHhC
Confidence 899999999999999999999999999999999999999998877665
No 11
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=99.80 E-value=1.5e-19 Score=159.78 Aligned_cols=131 Identities=7% Similarity=0.066 Sum_probs=119.5
Q ss_pred CCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhc---CCcEEEEEcCCCCcEeEEeEhhhhhh
Q 019653 186 ELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK---GHSRVPVYYEEPTNIIGLILVKNLLT 262 (337)
Q Consensus 186 ~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~---~~sr~PV~~~~~~~ivGiv~~kDll~ 262 (337)
.++++|++++++++.+++.+|+++|+| +++++++++++. ++++.++++ +++.+||+|++ ++++|+|+.+|++.
T Consensus 36 ~l~~~e~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-eal~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~dll~ 111 (205)
T 3kxr_A 36 QMGERQRQRFELYDQYSENEIGRYTDH--QMLVLSDKATVA-QAQRFFRRIELDCNDNLFIVDEA-DKYLGTVRRYDIFK 111 (205)
T ss_dssp HSCHHHHHHHHHHHHSCTTCGGGGCBC--CCCEEETTCBHH-HHHHHHHHCCCTTCCEEEEECTT-CBEEEEEEHHHHTT
T ss_pred cCCHHHHHHHHHHhCCCcchHHhhccC--ceEEECCCCcHH-HHHHHHHhhCccCeeEEEEEcCC-CeEEEEEEHHHHHh
Confidence 368999999999999999999999997 788999999998 999999987 78999999875 89999999999986
Q ss_pred cCCCCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCc
Q 019653 263 IHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPAS 322 (337)
Q Consensus 263 ~~~~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~ 322 (337)
.. .+.+++++|.+++.++++++++.++++.|++++.+.++|+|++|+..|++|.+|.+
T Consensus 112 ~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVD~~g~lvGiIT~~Dil 169 (205)
T 3kxr_A 112 HE--PHEPLISLLSEDSRALTANTTLLDAAEAIEHSREIELPVIDDAGELIGRVTLRAAT 169 (205)
T ss_dssp SC--TTSBGGGGCCSSCCCEETTSCHHHHHHHHHTSSCSEEEEECTTSBEEEEEEHHHHH
T ss_pred CC--CcchHHHHhcCCCeEECCCCCHHHHHHHHHhcCCCEEEEEcCCCeEEEEEEHHHHH
Confidence 53 35679999888999999999999999999999999999999999999999986654
No 12
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=99.80 E-value=1.8e-20 Score=158.61 Aligned_cols=128 Identities=16% Similarity=0.206 Sum_probs=108.8
Q ss_pred HHHhhh-cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC------
Q 019653 194 IIAGAL-ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE------ 266 (337)
Q Consensus 194 ~l~~~l-~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~------ 266 (337)
|+.+.+ +|-..+++++|+|+++++++++++|++ ++++.|.+++|+++||+|++ ++++|+++.+|+++....
T Consensus 4 mi~~~~e~~l~~~~~~iM~P~~~v~~v~~~~t~~-~a~~~m~~~~~s~~pVvd~~-~~lvGiit~~Di~~~~~~~~~~~~ 81 (156)
T 3k6e_A 4 MIAKEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQE 81 (156)
T ss_dssp HHHHHHHHHHHTTGGGGEEETTSSCCEETTSBHH-HHHHHHTTSSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHH
T ss_pred hHHHHHHHHhhccHHHhCcchhHeEEECCcCCHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEecchhhhhhhcccccc
Confidence 344444 355568999999999999999999998 99999999999999999875 899999999999863211
Q ss_pred --CCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcccc
Q 019653 267 --DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSA 325 (337)
Q Consensus 267 --~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~ 325 (337)
.+.++.++|.+++.++++++++.++++.|.+++ +++|+||+|...|++|+.|.++..
T Consensus 82 ~~~~~~v~~im~~~~~~v~~~~~l~~~~~~m~~~~--~lpVVd~~g~l~GiiT~~Dil~~~ 140 (156)
T 3k6e_A 82 IMADTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKAV 140 (156)
T ss_dssp HHTTSBGGGTCBCSCCCBCTTCCHHHHHHHTTTSS--EEEEECTTSBEEEEEEHHHHHHHH
T ss_pred cccccCHHHhhcCCceecccccHHHHHHHHHHHcC--CeEEEecCCEEEEEEEHHHHHHHH
Confidence 246789999899999999999999999998765 589999999999999998876644
No 13
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=99.75 E-value=1.1e-18 Score=161.10 Aligned_cols=137 Identities=13% Similarity=0.125 Sum_probs=122.7
Q ss_pred CCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhc-----CCcEEEEEcCCCCcEeEEeEhhh
Q 019653 185 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILVKN 259 (337)
Q Consensus 185 g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~-----~~sr~PV~~~~~~~ivGiv~~kD 259 (337)
|.++.++++.+.+++++.+.+|+++|+| +++++++++++. ++++.++++ +++++||+|++ ++++|+|+.+|
T Consensus 116 ~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~~Vvd~~-~~lvGivt~~d 191 (278)
T 2yvy_A 116 DLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLRRAAPDAETIYYIYVVDEK-GRLKGVLSLRD 191 (278)
T ss_dssp HHSCHHHHHHHHHHHHSCTTBGGGTCBS--CCCEECTTSBHH-HHHHHHHHHTTTCSCSSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHHCCCcchHHhhcCC--CceEECCCCcHH-HHHHHHHHccCCccceeEEEEECCC-CCEEEEEEHHH
Confidence 4578899999999999999999999997 788999999998 999999987 78999999876 89999999999
Q ss_pred hhhcCCCCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCC
Q 019653 260 LLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYG 327 (337)
Q Consensus 260 ll~~~~~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~ 327 (337)
++... .+.+++++|.+++.+|++++++.++++.|++++.+.++|+|++|+..|++|.+|.++-..+
T Consensus 192 ll~~~--~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGivT~~Dil~~i~~ 257 (278)
T 2yvy_A 192 LIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEEGRLVGIVTVDDVLDVLEA 257 (278)
T ss_dssp HHHSC--TTCBSTTTSBSSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHC--
T ss_pred HhcCC--CCCcHHHHhCCCCeEEeCCCCHHHHHHHHHhcCCCEEEEEeCCCeEEEEEEHHHHHHHHHH
Confidence 98753 3567999987899999999999999999999999999999999999999999887665544
No 14
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=99.74 E-value=2.4e-18 Score=170.32 Aligned_cols=150 Identities=13% Similarity=0.129 Sum_probs=132.9
Q ss_pred cccHHHHHHHHHhhcccccCC---------CCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHH
Q 019653 164 LFRRAELKTLVNLHGNEAGKG---------GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLIL 234 (337)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~---------g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~ 234 (337)
.+++||+..+++.. .++ +.++++|++++++++++++.+|+++|+| ++++++++++++ ++++.++
T Consensus 110 ~l~~dd~~~ll~~l----~~~~~~~~~~ll~~l~~~~~~~i~~~l~~~~~~v~~iM~~--~~v~v~~~~tv~-ea~~~~~ 182 (473)
T 2zy9_A 110 ELSLDDLADALQAV----RKEDPAYFQRLKDLLDPRTRAEVEALARYEEDEAGGLMTP--EYVAVREGMTVE-EVLRFLR 182 (473)
T ss_dssp HSCHHHHHHHHHHH----HHSCHHHHHHHTTSSCHHHHHHHHHHHTSCTTBSTTTCBS--CEEEECTTCBHH-HHHHHHH
T ss_pred hCCHHHHHHHHHhC----CHhHHHHHHHHHhcCCHHHHHHHHHHhcCCCCCHHHhCCC--CceEeCCCCcHH-HHHHHHH
Confidence 46778888888732 233 6899999999999999999999999997 799999999998 9999999
Q ss_pred hc-----CCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecC
Q 019653 235 EK-----GHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQY 309 (337)
Q Consensus 235 ~~-----~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~ 309 (337)
++ +++++||+|++ ++++|+|+.+|++... .+.+++++|.+++.++++++++.++++.|++++.+.++|+|++
T Consensus 183 ~~~~~~~~~~~ipVvd~~-~~lvGiVt~~Dll~~~--~~~~v~dim~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVDe~ 259 (473)
T 2zy9_A 183 RAAPDAETIYYIYVVDEK-GRLKGVLSLRDLIVAD--PRTRVAEIMNPKVVYVRTDTDQEEVARLMADYDFTVLPVVDEE 259 (473)
T ss_dssp HHGGGCSEEEEEEEECTT-SBEEEEEEHHHHHHSC--TTSBGGGTSBSSCCCEESSSBHHHHHHHHHHHTCSEEEEECTT
T ss_pred hccCCcCceeEEEEECCC-CcEEEEEEHHHHhcCC--CCCcHHHHhCCCCeEEeCCCcHHHHHHHHHhcCCcEEEEEcCC
Confidence 87 47999999876 8999999999998753 3568999987899999999999999999999999999999999
Q ss_pred CCCCCCCCCCCCcc
Q 019653 310 NKNAEQPASNPASK 323 (337)
Q Consensus 310 G~~~~~~~~~~~~~ 323 (337)
|+..|++|.+|.++
T Consensus 260 g~lvGiIT~~Dil~ 273 (473)
T 2zy9_A 260 GRLVGIVTVDDVLD 273 (473)
T ss_dssp SBEEEEEEHHHHHH
T ss_pred CEEEEEEehHhhHH
Confidence 99999999977654
No 15
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=99.73 E-value=4.3e-18 Score=145.23 Aligned_cols=132 Identities=15% Similarity=0.175 Sum_probs=113.3
Q ss_pred HHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC---
Q 019653 190 DETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE--- 266 (337)
Q Consensus 190 ~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~--- 266 (337)
.+++.+.+. +.+++|+|+|++ +++++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++....
T Consensus 6 ~~~~~~~~~--l~~~~V~diM~~--~v~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dll~~~~~~~~ 79 (170)
T 4esy_A 6 ARRRAIARA--IRQVPIRDILTS--PVVTVREDDTLD-AVAKTMLEHQIGCAPVVDQN-GHLVGIITESDFLRGSIPFWI 79 (170)
T ss_dssp HHHHHHHHH--HHTSBGGGGCCS--CCCCEETTSBHH-HHHHHHHHTTCSEEEEECTT-SCEEEEEEGGGGGGGTCCTTH
T ss_pred HHHHHHHHH--HcCCCHHHhcCC--CCcEECCcCcHH-HHHHHHHHcCCeEEEEEcCC-ccEEEEEEHHHHHHHHhhccc
Confidence 344445444 468899999986 788999999998 99999999999999999876 899999999999864321
Q ss_pred -----------------------CCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 267 -----------------------DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 267 -----------------------~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
...+++++|.+++.++++++++.++++.|.+++.+.++|+|+ |...|++|++|.++
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~tv~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGivt~~Dil~ 158 (170)
T 4esy_A 80 YEASEILSRAIPAPEVEHLFETGRKLTASAVMTQPVVTAAPEDSVGSIADQMRRHGIHRIPVVQD-GVPVGIVTRRDLLK 158 (170)
T ss_dssp HHHHHHHTTTSCHHHHHHHHHHHTTCBHHHHCBCCSCCBCTTSBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHTT
T ss_pred cchhhhhhhccchhhHHhhhccccccchhhhcccCcccCCcchhHHHHHHHHHHcCCcEEEEEEC-CEEEEEEEHHHHHH
Confidence 134678898899999999999999999999999999999985 99999999999988
Q ss_pred ccCCC
Q 019653 324 SAYGR 328 (337)
Q Consensus 324 ~~~~~ 328 (337)
-.+++
T Consensus 159 ~l~~~ 163 (170)
T 4esy_A 159 LLLLE 163 (170)
T ss_dssp TSCCC
T ss_pred HHHhc
Confidence 77665
No 16
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=99.68 E-value=1.3e-17 Score=139.79 Aligned_cols=125 Identities=15% Similarity=0.168 Sum_probs=108.4
Q ss_pred HhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC--------C
Q 019653 196 AGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE--------D 267 (337)
Q Consensus 196 ~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~--------~ 267 (337)
.+..++...+++|+|+|+.++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|++..... .
T Consensus 7 ~~~~~l~~~~v~dim~p~~~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~ 84 (156)
T 3ctu_A 7 KEFETFLLGQEETFLTPAKNLAVLIDTHNAD-HATLLLSQMTYTRVPVVTDE-KQFVGTIGLRDIMAYQMEHDLSQEIMA 84 (156)
T ss_dssp HHHHHHHHTTGGGGEEEGGGCCCEETTSBHH-HHHHHHTTCSSSEEEEECC--CBEEEEEEHHHHHHHHHHHTCCHHHHT
T ss_pred HHHHHHHHHHHHHHcCcccCceEECCCCCHH-HHHHHHHHCCCceEeEECCC-CEEEEEEcHHHHHHHHHhccccccccc
Confidence 3445677788999999999999999999998 99999999999999999876 899999999999874321 1
Q ss_pred CCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 268 EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 268 ~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
..++.++|.+++.++++++++.++++.|.+++ .++|+|++|...|+++.+|.++.
T Consensus 85 ~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~--~lpVvd~~g~~~Giit~~dil~~ 139 (156)
T 3ctu_A 85 DTDIVHMTKTDVAVVSPDFTITEVLHKLVDES--FLPVVDAEGIFQGIITRKSILKA 139 (156)
T ss_dssp TSBGGGGCBCSCCCBCSSCCHHHHHHHTTTSS--EEEEECTTSBEEEEEETTHHHHH
T ss_pred cCcHHHhccCCceeeCCCCcHHHHHHHHHHcC--eEEEEcCCCeEEEEEEHHHHHHH
Confidence 46789998889999999999999999999886 58899999999999999886543
No 17
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.68 E-value=1.8e-17 Score=155.84 Aligned_cols=136 Identities=8% Similarity=0.111 Sum_probs=114.9
Q ss_pred CCCCHHHHHHHHhhhcccc-cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 185 GELTHDETTIIAGALELTE-KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 185 g~l~~~E~~~l~~~l~l~~-~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
+.++++|+++++++++|.+ .+|+|+|+|+.++++++.++++. ++++.|.+++|+++||++++.++++|+|+.+|++..
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~v~dim~~~~~vv~v~~~~tv~-~a~~~~~~~~~~~~pV~d~~~~~~vGiv~~~Dl~~~ 80 (334)
T 2qrd_G 2 MDVQETQKGALKEIQAFIRSRTSYDVLPTSFRLIVFDVTLFVK-TSLSLLTLNNIVSAPLWDSEANKFAGLLTMADFVNV 80 (334)
T ss_dssp CSHHHHHHHHHHHHHHHHHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSCEEEEETTTTEEEEEECHHHHHHH
T ss_pred CCCchHHHHHHHHHHHHHhcCchhhhCCCCCCEEEEcCCCCHH-HHHHHHHHcCCeEEEEEeCCCCeEEEEEEHHHHHHH
Confidence 3466789999999998555 99999999999999999999998 999999999999999999866899999999999863
Q ss_pred C--------CCC------CCCccc-------cccccC--ceeCCCCCHHHHHHHHhhCCCeEEEEEecCCC-----CCCC
Q 019653 264 H--------PED------EVPVKS-------VTIRRI--PRVPETLPLYEILNEFQKGHSHMAVVVRQYNK-----NAEQ 315 (337)
Q Consensus 264 ~--------~~~------~~~v~~-------i~~~~~--~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~-----~~~~ 315 (337)
. ... ..++.. +|.+++ .++++++++.++++.|++++.+.++|+|++|+ ..|+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~im~~~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~~~~~Gi 160 (334)
T 2qrd_G 81 IKYYYQSSSFPEAIAEIDKFRLLGLREVERKIGAIPPETIYVHPMHSLMDACLAMSKSRARRIPLIDVDGETGSEMIVSV 160 (334)
T ss_dssp HHHHHHHCSCGGGGGGGGSCBHHHHHHHHHHHTCSCSSCCCBCTTSBHHHHHHHHHHSCCSEEEEEEEETTTTEEEEEEE
T ss_pred HHHHhhccCCccHHHHHhhhchhhHHHHHHhhccCCCceeeeCCCCcHHHHHHHHHHCCceEEEEEeCCCCcCccceEEE
Confidence 2 111 222222 356777 89999999999999999999999999999876 7898
Q ss_pred CCCCCC
Q 019653 316 PASNPA 321 (337)
Q Consensus 316 ~~~~~~ 321 (337)
+|..|.
T Consensus 161 vt~~dl 166 (334)
T 2qrd_G 161 LTQYRI 166 (334)
T ss_dssp EEHHHH
T ss_pred eeHHHH
Confidence 887664
No 18
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=99.68 E-value=2.5e-17 Score=137.92 Aligned_cols=126 Identities=17% Similarity=0.157 Sum_probs=104.7
Q ss_pred HHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC--------
Q 019653 195 IAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-------- 266 (337)
Q Consensus 195 l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-------- 266 (337)
.++...+.+.+|+++|+|+.++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|++.....
T Consensus 2 ~~~~~~l~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 79 (157)
T 2emq_A 2 TWEHNEFMQMTVKPFLIPADKVAHVQPGNYLD-HALLVLTKTGYSAIPVLDTS-YKLHGLISMTMMMDAILGLERIEFER 79 (157)
T ss_dssp --------CCBSTTTCEEGGGSCCBCTTSBHH-HHHHHHHHSSSSEEEEECTT-CCEEEEEEHHHHHHHSBCSSSBCGGG
T ss_pred chhHhhHhhCcHHhhccCCccceEECCCCcHH-HHHHHHHHCCceEEEEEcCC-CCEEEEeeHHHHHHHHhcccccchHH
Confidence 34556678899999999877888999999998 99999999999999999875 899999999999875432
Q ss_pred -CCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 267 -DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 267 -~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
...++.++|.+++.++++++++.++++.|.+++. ++|+|++|...|.++.+|.++.
T Consensus 80 ~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--l~Vvd~~g~~~Giit~~dil~~ 136 (157)
T 2emq_A 80 LETMKVEEVMNRNIPRLRLDDSLMKAVGLIVNHPF--VCVENDDGYFAGIFTRREVLKQ 136 (157)
T ss_dssp GGTCBGGGTCBCCCCEEETTSBHHHHHHHHHHSSE--EEEECSSSSEEEEEEHHHHHHH
T ss_pred hcCCcHHHHhCCCCceecCCCcHHHHHHHHhhCCE--EEEEcCCCeEEEEEEHHHHHHH
Confidence 2467889988889999999999999999999976 8899999999999999776543
No 19
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=99.68 E-value=1.4e-17 Score=138.08 Aligned_cols=123 Identities=18% Similarity=0.174 Sum_probs=107.7
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC----------------
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---------------- 265 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~---------------- 265 (337)
+..+|+|+|+|+.++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|++....
T Consensus 3 ~~~~v~~im~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~~~~~~~~~~~~ 80 (152)
T 4gqw_A 3 GVYTVGEFMTKKEDLHVVKPTTTVD-EALELLVENRITGFPVIDED-WKLVGLVSDYDLLALDSGDSTWKTFNAVQKLLS 80 (152)
T ss_dssp CCSBGGGTSEESTTCCCBCTTSBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHTTCC----CCHHHHHHHTC--
T ss_pred ceEEhhhccCCCCCCeEECCCCcHH-HHHHHHHHcCCceEEEEeCC-CeEEEEEEHHHHHHhhcccCcccchHHHHHHHH
Confidence 4678999999987899999999998 99999999999999999876 89999999999986421
Q ss_pred -CCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccC
Q 019653 266 -EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAY 326 (337)
Q Consensus 266 -~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~ 326 (337)
....++.++|.+++.++++++++.++++.|.+++.+.++|+|++|...|+++.+|.++...
T Consensus 81 ~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~~~l~Vvd~~g~~~Giit~~dil~~~~ 142 (152)
T 4gqw_A 81 KTNGKLVGDLMTPAPLVVEEKTNLEDAAKILLETKYRRLPVVDSDGKLVGIITRGNVVRAAL 142 (152)
T ss_dssp ---CCBHHHHSEESCCCEESSSBHHHHHHHHHHSSCCEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HhccccHHHhcCCCceEECCCCcHHHHHHHHHHCCCCEEEEECCCCcEEEEEEHHHHHHHHH
Confidence 1235788988788889999999999999999999999999999999999999988765443
No 20
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=99.67 E-value=1.8e-17 Score=137.91 Aligned_cols=121 Identities=17% Similarity=0.141 Sum_probs=106.6
Q ss_pred hcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC---------CCC
Q 019653 199 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------DEV 269 (337)
Q Consensus 199 l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~---------~~~ 269 (337)
-.+.+.+|+|+|+|..++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++.... ...
T Consensus 10 ~~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~ 87 (150)
T 3lqn_A 10 DEFQQIFVKDLMISSEKVAHVQIGNGLE-HALLVLVKSGYSAIPVLDPM-YKLHGLISTAMILDGILGLERIEFERLEEM 87 (150)
T ss_dssp HHHHHCBHHHHSEEGGGSCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHTBCSSSBCGGGGGGC
T ss_pred HhhhcCChhhcccCCCceEEECCCCcHH-HHHHHHHHcCCcEEEEECCC-CCEEEEEEHHHHHHHHHhhcccchhHHhcC
Confidence 3567889999999977899999999998 99999999999999999876 899999999999875421 246
Q ss_pred CccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 270 PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 270 ~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
++.++|.+++.++++++++.++++.|.+++. ++|+|++|...|++|.+|.++
T Consensus 88 ~v~~~m~~~~~~v~~~~~l~~a~~~~~~~~~--l~Vvd~~g~~~Giit~~dil~ 139 (150)
T 3lqn_A 88 KVEQVMKQDIPVLKLEDSFAKALEMTIDHPF--ICAVNEDGYFEGILTRRAILK 139 (150)
T ss_dssp BGGGTCBSSCCEEETTCBHHHHHHHHHHCSE--EEEECTTCBEEEEEEHHHHHH
T ss_pred CHHHHhcCCCceeCCCCCHHHHHHHHHhCCE--EEEECCCCcEEEEEEHHHHHH
Confidence 7889988889999999999999999999886 889999999999999877654
No 21
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=99.66 E-value=1.6e-17 Score=133.05 Aligned_cols=117 Identities=14% Similarity=0.236 Sum_probs=104.7
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccCceeC
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVP 283 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~~~V~ 283 (337)
.+|+|+|++ ++.++++++++. ++++.|.+++++.+||+|++ ++++|+++.+|++.....+..++.++|.+++.+++
T Consensus 1 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~G~vt~~dl~~~~~~~~~~v~~~~~~~~~~v~ 76 (122)
T 3kpb_A 1 TLVKDILSK--PPITAHSNISIM-EAAKILIKHNINHLPIVDEH-GKLVGIITSWDIAKALAQNKKTIEEIMTRNVITAH 76 (122)
T ss_dssp CBHHHHCCS--CCCCEETTSBHH-HHHHHHHHHTCSCEEEECTT-SBEEEEECHHHHHHHHHTTCCBGGGTSBSSCCCEE
T ss_pred CchHHhhCC--CCEEeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CCEEEEEEHHHHHHHHHhcccCHHHHhcCCCeEEC
Confidence 368999986 678899999998 99999999999999999876 89999999999998644445579999888999999
Q ss_pred CCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 284 ETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 284 ~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
+++++.++++.|.+++.+.++|+|++|...|.++.+|.++-
T Consensus 77 ~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Givt~~dl~~~ 117 (122)
T 3kpb_A 77 EDEPVDHVAIKMSKYNISGVPVVDDYRRVVGIVTSEDISRL 117 (122)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred CCCCHHHHHHHHHHhCCCeEEEECCCCCEEEEEeHHHHHHH
Confidence 99999999999999999999999999999999999887554
No 22
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=99.66 E-value=6.8e-17 Score=149.80 Aligned_cols=133 Identities=17% Similarity=0.155 Sum_probs=120.4
Q ss_pred CCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhc-----CCcEEEEEcCCCCcEeEEeEhhh
Q 019653 185 GELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEK-----GHSRVPVYYEEPTNIIGLILVKN 259 (337)
Q Consensus 185 g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~-----~~sr~PV~~~~~~~ivGiv~~kD 259 (337)
+.++.+|+..+.+++.+.+.+|+++|++ +++++++++++. ++++.++++ +++++||+|++ ++++|+|+.+|
T Consensus 118 ~~l~~~e~~~i~~ll~~~~~~v~~iM~~--~~~~v~~~~tv~-ea~~~~~~~~~~~~~~~~~pVvd~~-~~lvGivt~~d 193 (286)
T 2oux_A 118 SLLSSEEAGEIKELLHYEDETAGAIMTT--EFVSIVANQTVR-SAMYVLKNQADMAETIYYVYVVDQE-NHLVGVISLRD 193 (286)
T ss_dssp HTSCHHHHHHHHHHTTSCTTBHHHHCBS--CCCEECSSSBHH-HHHHHHHHHCSSCSCCSEEEEECTT-CBEEEEEEHHH
T ss_pred HcCCHHHHHHHHHHhcCChHHHHHhCCC--CceEECCCCcHH-HHHHHHHHcccCccceeEEEEEcCC-CeEEEEEEHHH
Confidence 3578889999999999999999999986 788999999998 999999988 88999999876 89999999999
Q ss_pred hhhcCCCCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 260 LLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 260 ll~~~~~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
++... .+.++.++|.+++.++++++++.++++.|++++.+.++|+|++|...|++|++|.++
T Consensus 194 ll~~~--~~~~v~~im~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIT~~Dil~ 255 (286)
T 2oux_A 194 LIVND--DDTLIADILNERVISVHVGDDQEDVAQTIRDYDFLAVPVTDYDDHLLGIVTVDDIID 255 (286)
T ss_dssp HTTSC--TTSBHHHHSBSCCCCEETTSBHHHHHHHHHHHTCSEEEEECTTCBEEEEEEHHHHHH
T ss_pred HHcCC--CCCcHHHHcCCCCeeecCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHH
Confidence 98754 356789998889999999999999999999999999999999999999999977654
No 23
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=99.65 E-value=4.5e-17 Score=135.68 Aligned_cols=117 Identities=17% Similarity=0.150 Sum_probs=103.8
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC----CCCCccccccccC
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----DEVPVKSVTIRRI 279 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~----~~~~v~~i~~~~~ 279 (337)
.+|+|+|+|+.++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++.... .+.++.++|.+++
T Consensus 28 ~~v~dim~~~~~~~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~~~~ 105 (149)
T 3k2v_A 28 LRVNDIMHTGDEIPHVGLQATLR-DALLEITRKNLGMTAICDDD-MNIIGIFTDGDLRRVFDTGVDMRDASIADVMTRGG 105 (149)
T ss_dssp SBGGGTSBCGGGSCEECTTCBHH-HHHHHHHHHTSSEEEEECTT-CBEEEEEEHHHHHHHHCSSSCCTTCBHHHHSEESC
T ss_pred cCHHHHhcCCCCCeEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CcEEEEecHHHHHHHHhcCCCcccCcHHHHcCCCC
Confidence 58999999877899999999998 99999999999999999876 899999999999975322 3457889987889
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 280 PRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 280 ~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
.++++++++.++++.|.+++.+.++|+|+. ...|+++.+|.++
T Consensus 106 ~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~-~~~Giit~~dil~ 148 (149)
T 3k2v_A 106 IRIRPGTLAVDALNLMQSRHITCVLVADGD-HLLGVVHMHDLLR 148 (149)
T ss_dssp CEECTTCBHHHHHHHHHHHTCSEEEEEETT-EEEEEEEHHHHTC
T ss_pred eEECCCCCHHHHHHHHHHcCCCEEEEecCC-EEEEEEEHHHhhc
Confidence 999999999999999999999999999975 8899998877543
No 24
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=99.64 E-value=9.6e-17 Score=130.11 Aligned_cols=117 Identities=9% Similarity=0.061 Sum_probs=104.1
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCC---CCcccccccc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDE---VPVKSVTIRR 278 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~---~~v~~i~~~~ 278 (337)
.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||+|+ ++++|+|+.+|+++...++. .+++++|.++
T Consensus 3 ~s~~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~--~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 77 (128)
T 3gby_A 3 ASVTFSYLAET--DYPVFTLGGSTA-DAARRLAASGCACAPVLDG--ERYLGMVHLSRLLEGRKGWPTVKEKLGEELLET 77 (128)
T ss_dssp TTCBGGGGCBC--CSCCEETTSBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHTTCSSSCCTTCBCCGGGCBC
T ss_pred cceEHHHhhcC--CcceECCCCCHH-HHHHHHHHCCCcEEEEEEC--CEEEEEEEHHHHHHHHhhCCcccCcHHHHccCC
Confidence 46799999986 577899999998 9999999999999999986 89999999999998654322 5689998888
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 279 IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 279 ~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
+.++++++++.++++.|.+++.+.++|+|++|...|.++.+|.++
T Consensus 78 ~~~v~~~~~l~~~~~~~~~~~~~~lpVvd~~g~~~Giit~~dll~ 122 (128)
T 3gby_A 78 VRSYRPGEQLFDNLISVAAAKCSVVPLADEDGRYEGVVSRKRILG 122 (128)
T ss_dssp CCCBCTTSBGGGSHHHHHHCSSSEEEEECTTCBEEEEEEHHHHHH
T ss_pred CcEECCCCCHHHHHHHHHhCCCcEEEEECCCCCEEEEEEHHHHHH
Confidence 999999999999999999999999999999999999999877654
No 25
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=99.64 E-value=5.8e-17 Score=138.46 Aligned_cols=119 Identities=17% Similarity=0.173 Sum_probs=105.1
Q ss_pred ccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC------------------
Q 019653 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH------------------ 264 (337)
Q Consensus 203 ~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~------------------ 264 (337)
.++|+|+|+|+.++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++..
T Consensus 3 ~~~v~dim~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~~~ 80 (180)
T 3sl7_A 3 GYTVGDFMTPRQNLHVVKPSTSVD-DALELLVEKKVTGLPVIDDN-WTLVGVVSDYDLLALDSISGRSQNDTNLFPDVDS 80 (180)
T ss_dssp CCBHHHHSEEGGGCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHTCC-------------------
T ss_pred ceeHHHhcCCCCCceeeCCCCcHH-HHHHHHHHcCCCeEEEECCC-CeEEEEEEHHHHHhhhhhccccCCcccccccccc
Confidence 468999999988899999999998 99999999999999999876 8999999999998531
Q ss_pred -------------CCCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 265 -------------PEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 265 -------------~~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
.....+++++|.+++.++++++++.++++.|.+++.+.++|+|++|...|+++.+|.++
T Consensus 81 ~~~~~~~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~ 152 (180)
T 3sl7_A 81 TWKTFNELQKLISKTYGKVVGDLMTPSPLVVRDSTNLEDAARLLLETKFRRLPVVDADGKLIGILTRGNVVR 152 (180)
T ss_dssp CCCSHHHHHHHHHTTTTCBHHHHSEESCCCEETTSBHHHHHHHHTTSTTCEEEEECTTCBEEEEEEHHHHHH
T ss_pred hhhhhHHHHHHHhccccccHHHHhCCCceEeCCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHH
Confidence 11245788988788899999999999999999999999999999999999999877654
No 26
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.64 E-value=3.9e-17 Score=153.32 Aligned_cols=139 Identities=9% Similarity=0.209 Sum_probs=111.8
Q ss_pred cCCCCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhh
Q 019653 182 GKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 261 (337)
Q Consensus 182 ~~~g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll 261 (337)
++.|.+.+.+++.+.+. |.+.+|+|+|+|+.++++++.++++. ++++.|.+++++++||++++.++++|+++.+|++
T Consensus 15 ~~~~~~~~~~~~~~~~~--l~~~~v~dim~p~~~v~~v~~~~~v~-~a~~~~~~~~~~~~pV~d~~~~~~vGivt~~Dll 91 (330)
T 2v8q_E 15 EHSQETPESNSSVYTTF--MKSHRCYDLIPTSSKLVVFDTSLQVK-KAFFALVTNGVRAAPLWDSKKQSFVGMLTITDFI 91 (330)
T ss_dssp --------CCSCHHHHH--HHHSBGGGGSCSEEEEEEEETTSBHH-HHHHHHHHHTCSEEEEEETTTTEEEEEEEHHHHH
T ss_pred hHhhhccchhhHHHHHH--HHcCcHhhhccCCCcEEEEeCCCcHH-HHHHHHHHcCCcEEEEEeCCCCeEEEEEEHHHHH
Confidence 34567777777777777 56889999999999999999999998 9999999999999999998767899999999998
Q ss_pred hcCCC------------CCC-------CccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEec-CCCCCCCCCCCCC
Q 019653 262 TIHPE------------DEV-------PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQ-YNKNAEQPASNPA 321 (337)
Q Consensus 262 ~~~~~------------~~~-------~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe-~G~~~~~~~~~~~ 321 (337)
..... ... .++++|.+++.++++++++.++++.|++++.+.++|+|+ +|+..|++|..|.
T Consensus 92 ~~l~~~~~~~~~~~~~l~~~~~~~~~~~~~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~~Givt~~dl 171 (330)
T 2v8q_E 92 NILHRYYKSALVQIYELEEHKIETWREVYLQDSFKPLVCISPNASLFDAVSSLIRNKIHRLPVIDPESGNTLYILTHKRI 171 (330)
T ss_dssp HHHHHHHHHHTTTCCCGGGCBHHHHHHHHSSSSCCCCCCBCTTSBHHHHHHHHHHHTCSCEEEECTTTCCEEEEECHHHH
T ss_pred HHHHHHHhccccchhHHhhccHHHHHHHHhhcccCCceEeCCCCCHHHHHHHHHHCCCCeEEEEeCCCCcEEEEEcHHHH
Confidence 63210 011 123567788999999999999999999999999999999 8999999998665
Q ss_pred cc
Q 019653 322 SK 323 (337)
Q Consensus 322 ~~ 323 (337)
++
T Consensus 172 ~~ 173 (330)
T 2v8q_E 172 LK 173 (330)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 27
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=99.64 E-value=1.7e-16 Score=129.99 Aligned_cols=122 Identities=13% Similarity=0.210 Sum_probs=105.9
Q ss_pred hcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhh-hcCCC---CCCCcccc
Q 019653 199 LELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL-TIHPE---DEVPVKSV 274 (337)
Q Consensus 199 l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll-~~~~~---~~~~v~~i 274 (337)
+.+.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|++ ..... ...++.++
T Consensus 2 ~~l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~ 77 (138)
T 2yzi_A 2 VMDMKAPIKVYMTK--KLLGVKPSTSVQ-EASRLMMEFDVGSLVVINDD-GNVVGFFTKSDIIRRVIVPGLPYDIPVERI 77 (138)
T ss_dssp -CCTTSBGGGTCBC--CCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCCCTTSBGGGT
T ss_pred cchhhhhHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHhcCCcccCCHHHH
Confidence 46788999999985 788899999998 99999999999999999865 8999999999997 33321 34678999
Q ss_pred ccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcccc
Q 019653 275 TIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSA 325 (337)
Q Consensus 275 ~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~ 325 (337)
|.+++.++++++++.++++.|.+++.+.+ |+|++|...|+++.+|.++..
T Consensus 78 m~~~~~~v~~~~~l~~~~~~m~~~~~~~l-Vvd~~g~~~Giit~~dil~~~ 127 (138)
T 2yzi_A 78 MTRNLITANVNTPLGEVLRKMAEHRIKHI-LIEEEGKIVGIFTLSDLLEAS 127 (138)
T ss_dssp CBCSCCEEETTSBHHHHHHHHHHHTCSEE-EEEETTEEEEEEEHHHHHHHH
T ss_pred hhCCCeEECCCCcHHHHHHHHHhcCCCEE-EECCCCCEEEEEEHHHHHHHH
Confidence 88899999999999999999999999988 999999999999997765543
No 28
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=99.63 E-value=1.3e-16 Score=129.88 Aligned_cols=118 Identities=14% Similarity=0.190 Sum_probs=104.1
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC---CCCCCccccccc
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIR 277 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~---~~~~~v~~i~~~ 277 (337)
+.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||+| + ++++|+++.+|++.... ..+.++.++|.+
T Consensus 1 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~~~~ 75 (133)
T 2ef7_A 1 MEEEIVKEYMKT--QVISVTKDAKLN-DIAKVMTEKNIGSVIVVD-G-NKPVGIITERDIVKAIGKGKSLETKAEEFMTA 75 (133)
T ss_dssp CCCCBGGGTSBC--SCCEEETTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHHHTTCCTTCBGGGTSEE
T ss_pred CCcccHHHhccC--CCEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEcHHHHHHHHhcCCCcccCHHHHcCC
Confidence 467899999987 577899999998 999999999999999998 4 89999999999987432 124678999878
Q ss_pred cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 278 RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 278 ~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
++.++++++++.++++.|.+++.+.++|+|++|...|.++..|.++
T Consensus 76 ~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~ 121 (133)
T 2ef7_A 76 SLITIREDSPITGALALMRQFNIRHLPVVDDKGNLKGIISIRDITR 121 (133)
T ss_dssp CCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred CCEEECCCCCHHHHHHHHHHcCCCEEEEECCCCeEEEEEEHHHHHH
Confidence 8999999999999999999999999999999999999999877644
No 29
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=99.63 E-value=2.2e-16 Score=130.00 Aligned_cols=117 Identities=9% Similarity=0.107 Sum_probs=103.5
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCC--cEeEEeEhhhhhhcCC---CCCCCcccccccc
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT--NIIGLILVKNLLTIHP---EDEVPVKSVTIRR 278 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~--~ivGiv~~kDll~~~~---~~~~~v~~i~~~~ 278 (337)
.+|+|+|++ ++.++++++++. ++++.|.+++++++||+|++ + +++|+|+.+|+++... ..+.++.++|.++
T Consensus 5 ~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~ 80 (141)
T 2rih_A 5 IRTSELLKR--PPVSLPETATIR-EVATELAKNRVGLAVLTARD-NPKRPVAVVSERDILRAVAQRLDLDGPAMPIANSP 80 (141)
T ss_dssp CBGGGGCCS--CCEEEETTCBHH-HHHHHHHHHTCSEEEEEETT-EEEEEEEEEEHHHHHHHHHTTCCTTSBSGGGCBCC
T ss_pred eEHHHHhcC--CCeEeCCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcceeEEEEEHHHHHHHHhcCCCCCCCHHHHcCCC
Confidence 689999986 788999999998 99999999999999999875 5 8999999999987531 1246789998889
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcccc
Q 019653 279 IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSA 325 (337)
Q Consensus 279 ~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~ 325 (337)
+.+++++ ++.++++.|.+++.+.++|+|++|...|+++.+|.++..
T Consensus 81 ~~~v~~~-~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~dll~~~ 126 (141)
T 2rih_A 81 ITVLDTD-PVHVAAEKMRRHNIRHVVVVNKNGELVGVLSIRDLCFER 126 (141)
T ss_dssp CEEETTS-BHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHSCH
T ss_pred CeEEcCC-CHHHHHHHHHHcCCeEEEEEcCCCcEEEEEEHHHHHHHH
Confidence 9999999 999999999999999999999999999999998876543
No 30
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=99.63 E-value=1.2e-16 Score=135.39 Aligned_cols=130 Identities=10% Similarity=0.104 Sum_probs=113.0
Q ss_pred HhhhcccccccccccccC-ceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC-----CCCC
Q 019653 196 AGALELTEKTASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEV 269 (337)
Q Consensus 196 ~~~l~l~~~~V~dIMtpr-~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~-----~~~~ 269 (337)
.....+..++|+|+|+|+ .++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+++... ....
T Consensus 16 ~~~~~l~~~~v~dim~~~~~~~~~v~~~~~l~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~ 93 (165)
T 3fhm_A 16 NLYFQGMATFVKDLLDRKGRDVVTVGPDVSIG-EAAGTLHAHKIGAVVVTDAD-GVVLGIFTERDLVKAVAGQGAASLQQ 93 (165)
T ss_dssp CCCCSSSSCBHHHHHHHHCSCCCEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHGGGGGTS
T ss_pred hhhHhhhhcCHHHHhccCCCCCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEHHHHHHHHHhcCCccccC
Confidence 345678889999999985 5788999999998 99999999999999999876 89999999999986421 1346
Q ss_pred CccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCC
Q 019653 270 PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGR 328 (337)
Q Consensus 270 ~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~ 328 (337)
++.++|.+++.++++++++.++++.|.+++.+.++|+|+ |...|+++.+|.++....+
T Consensus 94 ~v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~~~Giit~~dil~~~~~~ 151 (165)
T 3fhm_A 94 SVSVAMTKNVVRCQHNSTTDQLMEIMTGGRFRHVPVEEN-GRLAGIISIGDVVKARIGE 151 (165)
T ss_dssp BGGGTSBSSCCCBCTTCBHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHTTCC
T ss_pred CHHHHhcCCCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHHH
Confidence 789998889999999999999999999999999999999 9999999998876655543
No 31
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=99.62 E-value=1.2e-16 Score=130.40 Aligned_cols=120 Identities=12% Similarity=0.090 Sum_probs=104.7
Q ss_pred ccccccccC-ceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhh-cCC----CCCCCcccccccc
Q 019653 205 TASDAMTPI-AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT-IHP----EDEVPVKSVTIRR 278 (337)
Q Consensus 205 ~V~dIMtpr-~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~-~~~----~~~~~v~~i~~~~ 278 (337)
+|+|+|+|+ .++.++++++++. ++++.|.+++++.+||+| + ++++|+|+.+|+++ ... ..+.++.++|.++
T Consensus 7 ~v~~im~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~~~ 83 (135)
T 2rc3_A 7 TVKHLLQEKGHTVVAIGPDDSVF-NAMQKMAADNIGALLVMK-D-EKLVGILTERDFSRKSYLLDKPVKDTQVKEIMTRQ 83 (135)
T ss_dssp BHHHHHHHHCCCCCEECTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHGGGSSSCGGGSBGGGTSBCS
T ss_pred eHHHHHhcCCCCcEEECCCCcHH-HHHHHHHhcCCCEEEEEE-C-CEEEEEEehHHHHHHHHHcCCCcccCCHHHhccCC
Confidence 899999976 6889999999998 999999999999999998 4 89999999999985 322 1356789998889
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCC
Q 019653 279 IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGR 328 (337)
Q Consensus 279 ~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~ 328 (337)
+.++++++++.++++.|.+++.+.++|+| +|...|+++.+|.++...++
T Consensus 84 ~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dll~~~~~~ 132 (135)
T 2rc3_A 84 VAYVDLNNTNEDCMALITEMRVRHLPVLD-DGKVIGLLSIGDLVKDAISQ 132 (135)
T ss_dssp CCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHHC-
T ss_pred CeEECCCCcHHHHHHHHHHhCCCEEEEEe-CCEEEEEEEHHHHHHHHHhc
Confidence 99999999999999999999999999999 69999999998876655443
No 32
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=99.61 E-value=2.3e-16 Score=156.78 Aligned_cols=148 Identities=16% Similarity=0.214 Sum_probs=113.1
Q ss_pred ccccHHHHHHHHHhhcccccCCCCC-----CHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcC
Q 019653 163 ALFRRAELKTLVNLHGNEAGKGGEL-----THDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG 237 (337)
Q Consensus 163 ~~~s~eEL~~lv~~~~~e~~~~g~l-----~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~ 237 (337)
..+|++|+...+... +..|.| .+++.+++.++ ++++++|++ ++++++++++++ ++++.|.+++
T Consensus 52 dtVTe~~ma~a~a~~----GGiGvI~~n~s~e~qa~~V~~V-----k~~~~~m~~--d~v~v~~~~tv~-ea~~~m~~~~ 119 (496)
T 4fxs_A 52 DTVTEARLAIALAQE----GGIGFIHKNMSIEQQAAQVHQV-----KIFEAGVVT--HPVTVRPEQTIA-DVMELTHYHG 119 (496)
T ss_dssp TTTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHH-----HHCCC--CB--CCCCBCSSSBHH-HHHHHHTSSC
T ss_pred chhhHHHHHHHHHHc----CCcceecCCCCHHHHHHHHHhc-----ccccccccc--CceEECCCCCHH-HHHHHHHHcC
Confidence 357899998887632 223445 66778889888 466889984 788999999998 9999999999
Q ss_pred CcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCcccccc-c-cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCC
Q 019653 238 HSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI-R-RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQ 315 (337)
Q Consensus 238 ~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~-~-~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~ 315 (337)
|+++||+|++ ++++|+|+.+|++... ..+.++.++|. + ++.++++++++.++++.|++++.+.++|+||+|...|+
T Consensus 120 ~s~~PVvd~~-~~lvGiVt~rDL~~~~-~~~~~v~diM~p~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~G~l~Gi 197 (496)
T 4fxs_A 120 FAGFPVVTEN-NELVGIITGRDVRFVT-DLTKSVAAVMTPKERLATVKEGATGAEVQEKMHKARVEKILVVNDEFQLKGM 197 (496)
T ss_dssp CCEEEEECSS-SBEEEEEEHHHHTTCC-CTTSBGGGTSEEGGGCCEEECC----CGGGTCC---CCCEEEECTTSBCCEE
T ss_pred CcEEEEEccC-CEEEEEEEHHHHhhcc-cCCCcHHHHhcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCCEEEe
Confidence 9999999976 8999999999998432 34567999965 3 68999999999999999999999999999999999999
Q ss_pred CCCCCCccc
Q 019653 316 PASNPASKS 324 (337)
Q Consensus 316 ~~~~~~~~~ 324 (337)
+|+.|.++.
T Consensus 198 IT~~DIl~~ 206 (496)
T 4fxs_A 198 ITAKDFHKA 206 (496)
T ss_dssp ECCC-----
T ss_pred ehHhHHHHh
Confidence 999988764
No 33
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=99.61 E-value=5.4e-16 Score=133.84 Aligned_cols=119 Identities=15% Similarity=0.190 Sum_probs=105.4
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC-----CCCCCcccccccc
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVPVKSVTIRR 278 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~-----~~~~~v~~i~~~~ 278 (337)
.+|+++|++ +++++++++++. ++++.|.+++++++||+|++ ++++|+++.+|++.... ....+++++|.++
T Consensus 9 ~~v~~im~~--~~~~v~~~~~l~-ea~~~~~~~~~~~~pVvd~~-g~~vGivt~~dl~~~~~~~~~~~~~~~v~~im~~~ 84 (184)
T 1pvm_A 9 MRVEKIMNS--NFKTVNWNTTVF-DAVKIMNENHLYGLVVKDDN-GNDVGLLSERSIIKRFIPRNKKPDEVPIRLVMRKP 84 (184)
T ss_dssp CBGGGTSBT--TCCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHHTGGGCCCGGGSBGGGTSBSS
T ss_pred cCHHHhcCC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHhhcccCcccCCHHHHhCCC
Confidence 689999985 688899999998 99999999999999999876 89999999999987532 2346789998788
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccC
Q 019653 279 IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAY 326 (337)
Q Consensus 279 ~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~ 326 (337)
+.++++++++.++++.|.+++.+.++|+|++|...|+++.+|.++...
T Consensus 85 ~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~Givt~~dll~~~~ 132 (184)
T 1pvm_A 85 IPKVKSDYDVKDVAAYLSENGLERCAVVDDPGRVVGIVTLTDLSRYLS 132 (184)
T ss_dssp CCEEETTCBHHHHHHHHHHHTCSEEEEECTTCCEEEEEEHHHHTTTSC
T ss_pred CcEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHHHHH
Confidence 999999999999999999999999999999999999999988765443
No 34
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.61 E-value=9.4e-17 Score=150.15 Aligned_cols=139 Identities=12% Similarity=0.203 Sum_probs=116.0
Q ss_pred CCCCCCHHHHHHHHhhhcc-cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhh
Q 019653 183 KGGELTHDETTIIAGALEL-TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL 261 (337)
Q Consensus 183 ~~g~l~~~E~~~l~~~l~l-~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll 261 (337)
+.|.++++|+++++++++| .+.+|+|+|+|+.++++++.++++. ++++.|.+++++++||+|++.++++|+++.+|++
T Consensus 8 ~~~~~~~~~~~~~~~i~~~l~~~~~~d~m~~~~~~v~v~~~~sv~-~a~~~m~~~~~~~~pV~d~~~~~lvGilt~~Dl~ 86 (323)
T 3t4n_C 8 SQEKVSIEQQLAVESIRKFLNSKTSYDVLPVSYRLIVLDTSLLVK-KSLNVLLQNSIVSAPLWDSKTSRFAGLLTTTDFI 86 (323)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHSBHHHHSCSEEEEEEEETTSBHH-HHHHHHHHTTCSCEEEEETTTTEEEEEECHHHHH
T ss_pred CCCcccHHHHHHHHHHHHHHHhCchHhhCCCCCcEEEEcCCCcHH-HHHHHHHHcCCceEEEEeCCCCeEEEEEEHHHHH
Confidence 4477889999999999998 9999999999999999999999998 9999999999999999998767999999999998
Q ss_pred hcCC----C-C---------CCCcc------ccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCC-----CCCCC
Q 019653 262 TIHP----E-D---------EVPVK------SVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNK-----NAEQP 316 (337)
Q Consensus 262 ~~~~----~-~---------~~~v~------~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~-----~~~~~ 316 (337)
.... . . ...+. ++|.+++.++++++++.++++.|.+++.+.++|+|++|+ ..|++
T Consensus 87 ~~l~~~~~~~~~~~~l~~~~~~~v~~i~~~~~~~~~~~v~v~~~~~l~~a~~~m~~~~~~~lpVvd~~~~~~~~~l~Giv 166 (323)
T 3t4n_C 87 NVIQYYFSNPDKFELVDKLQLDGLKDIERALGVDQLDTASIHPSRPLFEACLKMLESRSGRIPLIDQDEETHREIVVSVL 166 (323)
T ss_dssp HHHHHHHHCGGGGGGGGGCBHHHHHHHHHHTTC----CCCBCTTSBHHHHHHHHHHHTCSEEEEEEECTTTCCEEEEEEE
T ss_pred HHHHHHHcCcchhHHHHHHHHHHHHHHHHHhCCCCCCceEeCCCCcHHHHHHHHHhCCeeEEEEEecCCCCCccceEEEe
Confidence 6320 0 0 01122 233578889999999999999999999999999999887 78888
Q ss_pred CCCCCc
Q 019653 317 ASNPAS 322 (337)
Q Consensus 317 ~~~~~~ 322 (337)
|..|.+
T Consensus 167 t~~di~ 172 (323)
T 3t4n_C 167 TQYRIL 172 (323)
T ss_dssp EHHHHH
T ss_pred cHHHHH
Confidence 875543
No 35
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=99.61 E-value=1.7e-16 Score=133.48 Aligned_cols=120 Identities=17% Similarity=0.201 Sum_probs=104.8
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC---------CCCC
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------DEVP 270 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~---------~~~~ 270 (337)
.+.+.+|+++|+|+.++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|++..... ...+
T Consensus 10 ~l~~~~v~~im~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~ 87 (159)
T 1yav_A 10 QLLEATVGQFMIEADKVAHVQVGNNLE-HALLVLTKTGYTAIPVLDPS-YRLHGLIGTNMIMNSIFGLERIEFEKLDQIT 87 (159)
T ss_dssp -CTTCBHHHHSEEGGGSCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEEHHHHHHHHBCSSSBCGGGTTTSB
T ss_pred HHhHhhHHHHhCCccceEEECCCCcHH-HHHHHHHhCCCcEEEEECCC-CCEEEEeEHHHHHHHhhhhcccchhhhccCC
Confidence 567889999999877889999999998 99999999999999999876 799999999999874321 2457
Q ss_pred ccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 271 VKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 271 v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
+.++|.+++.++++++++.++++.|.+++. ++|+|++|...|+++++|.++
T Consensus 88 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~--lpVvd~~g~~vGiit~~dil~ 138 (159)
T 1yav_A 88 VEEVMLTDIPRLHINDPIMKGFGMVINNGF--VCVENDEQVFEGIFTRRVVLK 138 (159)
T ss_dssp HHHHSBCSCCEEETTSBHHHHHHHTTTCSE--EEEECTTCBEEEEEEHHHHHH
T ss_pred HHHhcCCCCceEcCCCCHHHHHHHHHhCCE--EEEEeCCCeEEEEEEHHHHHH
Confidence 889887889999999999999999998875 889999999999999877654
No 36
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=99.60 E-value=5.1e-16 Score=126.91 Aligned_cols=119 Identities=17% Similarity=0.246 Sum_probs=103.7
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhh-hhcCCC---CCCCcccccc
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNL-LTIHPE---DEVPVKSVTI 276 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDl-l~~~~~---~~~~v~~i~~ 276 (337)
+.+.+|+++|++ ++.++++++++. ++++.|.+++++.+||+|++ ++++|+++.+|+ +..... .+.++.++|.
T Consensus 5 l~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 80 (138)
T 2p9m_A 5 LKNIKVKDVMTK--NVITAKRHEGVV-EAFEKMLKYKISSLPVIDDE-NKVIGIVTTTDIGYNLIRDKYTLETTIGDVMT 80 (138)
T ss_dssp CTTCBGGGTSBC--SCCCEETTSBHH-HHHHHHHHHTCCEEEEECTT-CBEEEEEEHHHHHHHHTTTCCCSSCBHHHHSC
T ss_pred cccCCHHHhhcC--CceEECCCCcHH-HHHHHHHHCCCcEEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCcCHHHHhC
Confidence 567899999986 677899999998 99999999999999999876 899999999999 764322 3457889887
Q ss_pred ccCceeCCCCCHHHHHHHHhhCC-----CeEEEEEecCCCCCCCCCCCCCcc
Q 019653 277 RRIPRVPETLPLYEILNEFQKGH-----SHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 277 ~~~~~V~~~~~l~~~l~~m~~~~-----~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
+++.++++++++.++++.|.+++ .+.++|+|++|...|.++.+|.++
T Consensus 81 ~~~~~v~~~~~l~~~~~~~~~~~~~~~~~~~l~Vvd~~g~~~Giit~~dll~ 132 (138)
T 2p9m_A 81 KDVITIHEDASILEAIKKMDISGKKEEIINQLPVVDKNNKLVGIISDGDIIR 132 (138)
T ss_dssp SSCCCEETTSBHHHHHHHHTCC-----CCCEEEEECTTSBEEEEEEHHHHHH
T ss_pred CCcEEECCCCCHHHHHHHHHhcCCccccccEEEEECCCCeEEEEEEHHHHHH
Confidence 88999999999999999999999 999999999999999999877654
No 37
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=99.59 E-value=5.2e-16 Score=158.71 Aligned_cols=125 Identities=14% Similarity=0.054 Sum_probs=107.3
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHH-hcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCC-------------
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLIL-EKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED------------- 267 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~-~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~------------- 267 (337)
.+.+|+|+|+||+++.+++++++++ |+.+.+. +++++++||+|++ ++++|+|+.+|+++...++
T Consensus 451 ~~~~V~diM~p~~~v~~v~~~~t~~-e~~~~~~~~~~~~~~PVvd~~-~~lvGiVt~~DL~~~l~~~~~~~~~~~~~~~~ 528 (632)
T 3org_A 451 PEMTAREIMHPIEGEPHLFPDSEPQ-HIKGILEKFPNRLVFPVIDAN-GYLLGAISRKEIVDRLQHVLEDVPEPIAGHRT 528 (632)
T ss_dssp TTSBHHHHCBCTTTSCCBCSSSCHH-HHHHHHHHSTTCCEECBBCTT-CBBCCEESHHHHTTTTTTC-------------
T ss_pred ccCcHHHHhhcCCCceEecCCCcHH-HHHHHHHhcCCcceEEEEecC-CeEEEEEEHHHHHHHHHHHhhhcccccccccc
Confidence 6789999999999999999999998 9999999 8999999999875 8999999999998753211
Q ss_pred --------------------------------------CCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecC
Q 019653 268 --------------------------------------EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQY 309 (337)
Q Consensus 268 --------------------------------------~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~ 309 (337)
..+++++|.+++.+|++++++.|+++.|++++.+.++|+ |+
T Consensus 529 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~v~~iMt~~pitV~~~~~l~ea~~~M~~~~i~~lpVv-e~ 607 (632)
T 3org_A 529 LVLLDAADLSENIEGLVDETPSGEHSSKGKRTATVLEPTSSLVVPCDVSPIVVTSYSLVRQLHFLFVMLMPSMIYVT-ER 607 (632)
T ss_dssp ------------------------------------------CCSCCCCCCEEETTCBHHHHHHHHHHTCCSEEEEE-ET
T ss_pred eeccCHHHHHhhcccCCCCCcccchhhhcccceEeeccccccchhhcCCCceecCCCcHHHHHHHHHhcCCCEEEEE-EC
Confidence 002677888999999999999999999999999999999 88
Q ss_pred CCCCCCCCCCCCccccCCCCc
Q 019653 310 NKNAEQPASNPASKSAYGRSP 330 (337)
Q Consensus 310 G~~~~~~~~~~~~~~~~~~~~ 330 (337)
|+..|++|++|.++. +.+++
T Consensus 608 G~lvGIVT~~Dll~~-~~~~~ 627 (632)
T 3org_A 608 GKLVGIVEREDVAYG-YSNSL 627 (632)
T ss_dssp TEEEEEEEGGGTEEC-CCC--
T ss_pred CEEEEEEehhhHHHH-HhhhH
Confidence 999999999998664 44554
No 38
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=99.59 E-value=9.1e-16 Score=129.19 Aligned_cols=118 Identities=14% Similarity=0.178 Sum_probs=102.8
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC----CCCCCCcccccc
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH----PEDEVPVKSVTI 276 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~----~~~~~~v~~i~~ 276 (337)
+.+++|+|+|++ . +++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|++... .....++.++|.
T Consensus 14 l~~~~v~~im~~--~-~~v~~~~~~~-~a~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~v~~~m~ 88 (159)
T 3fv6_A 14 LKKLQVKDFQSI--P-VVIHENVSVY-DAICTMFLEDVGTLFVVDRD-AVLVGVLSRKDLLRASIGQQELTSVPVHIIMT 88 (159)
T ss_dssp HTTCBGGGSCBC--C-CEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHTSCSCTTTCBGGGTSE
T ss_pred HhhCCHHHHcCC--C-EEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CcEEEEEeHHHHHHHhhccCcccCcCHHHHHc
Confidence 467899999985 3 4899999998 99999999999999999876 8999999999998742 123467899977
Q ss_pred c--cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCC---CCCCCCCCCCCcc
Q 019653 277 R--RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYN---KNAEQPASNPASK 323 (337)
Q Consensus 277 ~--~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G---~~~~~~~~~~~~~ 323 (337)
+ ++.++++++++.++++.|.+++.+.++|+|++| ...|+++.+|.++
T Consensus 89 ~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~~~~vGiit~~dil~ 140 (159)
T 3fv6_A 89 RMPNITVCRREDYVMDIAKHLIEKQIDALPVIKDTDKGFEVIGRVTKTNMTK 140 (159)
T ss_dssp ETTSCCCBCTTSBHHHHHHHHHHHTCSEEEEEEECSSSEEEEEEEEHHHHHH
T ss_pred CCCCcEEECCCCCHHHHHHHHHHcCCcEEEEEeCCCcceeEEEEEEHHHHHH
Confidence 6 888999999999999999999999999999988 8999999876543
No 39
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=99.58 E-value=3.6e-16 Score=127.15 Aligned_cols=121 Identities=12% Similarity=0.174 Sum_probs=103.2
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhh-hcCCC----CCCCcccccc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLL-TIHPE----DEVPVKSVTI 276 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll-~~~~~----~~~~v~~i~~ 276 (337)
.-.+|+++|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+++.+|++ +.... ...++.++|.
T Consensus 6 ~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~m~ 81 (133)
T 1y5h_A 6 TMTTARDIMNA--GVTCVGEHETLT-AAAQYMREHDIGALPICGDD-DRLHGMLTDRDIVIKGLAAGLDPNTATAGELAR 81 (133)
T ss_dssp --CCHHHHSEE--TCCCEETTSBHH-HHHHHHHHHTCSEEEEECGG-GBEEEEEEHHHHHHTTGGGTCCTTTSBHHHHHT
T ss_pred hhcCHHHHhcC--CceEeCCCCCHH-HHHHHHHHhCCCeEEEECCC-CeEEEEEeHHHHHHHHHhcCCCccccCHHHHhc
Confidence 34689999986 677899999998 99999999999999999865 8999999999998 33221 2467889887
Q ss_pred ccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCC
Q 019653 277 RRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYG 327 (337)
Q Consensus 277 ~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~ 327 (337)
+++.++++++++.++++.|.+++.+.++|+|+ |...|.++.+|.++...+
T Consensus 82 ~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~-g~~~Giit~~dil~~l~~ 131 (133)
T 1y5h_A 82 DSIYYVDANASIQEMLNVMEEHQVRRVPVISE-HRLVGIVTEADIARHLPE 131 (133)
T ss_dssp TCCCCEETTCCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHTCC-
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 89999999999999999999999999999998 999999999887665544
No 40
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=99.57 E-value=4.4e-16 Score=124.98 Aligned_cols=118 Identities=18% Similarity=0.206 Sum_probs=101.9
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC----CCCCccccccccC
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----DEVPVKSVTIRRI 279 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~----~~~~v~~i~~~~~ 279 (337)
++|+|+|++ ++.++++++++. ++++.|.+++++.+||+| + ++++|+++.+|+++.... .+.++.++|.+++
T Consensus 1 m~v~~~m~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd-~-~~~~G~it~~dl~~~~~~~~~~~~~~v~~~m~~~~ 75 (125)
T 1pbj_A 1 MRVEDVMVT--DVDTIDITASLE-DVLRNYVENAKGSSVVVK-E-GVRVGIVTTWDVLEAIAEGDDLAEVKVWEVMERDL 75 (125)
T ss_dssp -CHHHHCBC--SCCEEETTCBHH-HHHHHHHHHCCCEEEEEE-T-TEEEEEEEHHHHHHHHHHTCCTTTSBHHHHCBCGG
T ss_pred CCHHHhcCC--CceEECCCCcHH-HHHHHHHHcCCCEEEEEe-C-CeeEEEEeHHHHHHHHhcCCcccccCHHHHcCCCC
Confidence 368999986 678899999998 999999999999999998 4 899999999999864311 2467889887889
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCC
Q 019653 280 PRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYG 327 (337)
Q Consensus 280 ~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~ 327 (337)
.++++++++.++++.|.+++.+.++|+|+ |...|.++.+|.++...+
T Consensus 76 ~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~-~~~~Gvit~~dl~~~l~~ 122 (125)
T 1pbj_A 76 VTISPRATIKEAAEKMVKNVVWRLLVEED-DEIIGVISATDILRAKMA 122 (125)
T ss_dssp GEECTTSCHHHHHHHHHHHTCSEEEEEET-TEEEEEEEHHHHHHHHC-
T ss_pred eEECCCCCHHHHHHHHHhcCCcEEEEEEC-CEEEEEEEHHHHHHHHHh
Confidence 99999999999999999999999999999 999999999887654443
No 41
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.56 E-value=1.5e-15 Score=127.50 Aligned_cols=119 Identities=18% Similarity=0.197 Sum_probs=103.8
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcE-EEEEcCCCCcEeEEeEhhhhhhcC--------------
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSR-VPVYYEEPTNIIGLILVKNLLTIH-------------- 264 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr-~PV~~~~~~~ivGiv~~kDll~~~-------------- 264 (337)
.+.+.+|+++|++ ++.++++++++. ++++.|.++++++ +||+|++ +++|+|+.+|++...
T Consensus 12 ~~~~~~v~~im~~--~~~~v~~~~tl~-ea~~~m~~~~~~~~~~Vvd~~--~~vGivt~~dl~~~~~~~~~~~~~~~~~~ 86 (157)
T 1o50_A 12 HMKVKDVCKLISL--KPTVVEEDTPIE-EIVDRILEDPVTRTVYVARDN--KLVGMIPVMHLLKVSGFHFFGFIPKEELI 86 (157)
T ss_dssp TCBHHHHTTSSCC--CCEEECTTCBHH-HHHHHHHHSTTCCEEEEEETT--EEEEEEEHHHHHHHHHHHHHCCCC-----
T ss_pred hhccccHhhcccC--CCceECCCCCHH-HHHHHHHhCCCCccEEEEECC--EEEEEEEHHHHHHHHhhhHHhhhccHHHH
Confidence 4567889999986 788999999998 9999999999999 9999864 899999999998641
Q ss_pred -----CCCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 265 -----PEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 265 -----~~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
.....++.++|.+ +.++++++++.++++.|.+++.+.++|+|++|...|.++.+|.++.
T Consensus 87 ~~~~~~~~~~~v~~im~~-~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dll~~ 150 (157)
T 1o50_A 87 RSSMKRLIAKNASEIMLD-PVYVHMDTPLEEALKLMIDNNIQEMPVVDEKGEIVGDLNSLEILLA 150 (157)
T ss_dssp --CCCCCSSCBHHHHCBC-CCCBCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred HHHHHHHcCCcHHHHcCC-CeEECCCCCHHHHHHHHHHCCCcEEEEEcCCCEEEEEEEHHHHHHH
Confidence 1234578888766 8899999999999999999999999999999999999998876543
No 42
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=99.56 E-value=1.2e-15 Score=128.78 Aligned_cols=117 Identities=17% Similarity=0.148 Sum_probs=102.4
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC------------CCCCC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH------------PEDEV 269 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~------------~~~~~ 269 (337)
...+|+|+|++ ++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|++... .....
T Consensus 3 ~~~~v~dim~~--~~~~v~~~~tl~-~a~~~m~~~~~~~~pVvd~~-~~lvGivt~~dl~~~~~~~~~~~~~~~~~~~~~ 78 (160)
T 2o16_A 3 LMIKVEDMMTR--HPHTLLRTHTLN-DAKHLMEALDIRHVPIVDAN-KKLLGIVSQRDLLAAQESSLQRSAQGDSLAFET 78 (160)
T ss_dssp CCCBGGGTSEE--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHHHCC---------CCC
T ss_pred CcCcHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEeHHHHHHHHHHhhcccccccchhccc
Confidence 45789999986 677899999998 99999999999999999875 8999999999998642 11345
Q ss_pred CccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 270 PVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 270 ~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
++.++|.+++.++++++++.++++.|.+++.+.++|+|+ |...|+++..|.++
T Consensus 79 ~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~-g~lvGiit~~dil~ 131 (160)
T 2o16_A 79 PLFEVMHTDVTSVAPQAGLKESAIYMQKHKIGCLPVVAK-DVLVGIITDSDFVT 131 (160)
T ss_dssp BHHHHSCSCEEEBCTTSBHHHHHHHHHHTTCSCEEEEET-TEEEEEECHHHHHH
T ss_pred CHHHHhcCCCeEECCCCCHHHHHHHHHHhCCCEEEEEEC-CEEEEEEEHHHHHH
Confidence 788888888899999999999999999999999999998 99999999987654
No 43
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=99.55 E-value=5.6e-16 Score=127.32 Aligned_cols=122 Identities=13% Similarity=0.155 Sum_probs=102.3
Q ss_pred cccccccc---ccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC-----CCCCcc
Q 019653 201 LTEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVK 272 (337)
Q Consensus 201 l~~~~V~d---IMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~ 272 (337)
+.+.++++ +|+ .++.++++++++. ++++.|.+++++++||+|++ ++++|+++.+|++..... .+.++.
T Consensus 5 ~~~~~v~~~~~~~~--~~~~~v~~~~~~~-~a~~~~~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~ 80 (144)
T 2nyc_A 5 FLKIPIGDLNIITQ--DNMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSVG 80 (144)
T ss_dssp GGGSBGGGSSCCBC--SSCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHHHTC----CCSBHH
T ss_pred hhhcchhhcCCCCC--CCceEECCCCcHH-HHHHHHHHcCcceeeEEcCC-CcEEEEEcHHHHHHHhcccccccCCccHH
Confidence 45667888 776 4788899999998 99999999999999999876 899999999999874321 245788
Q ss_pred ccccc------cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccC
Q 019653 273 SVTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAY 326 (337)
Q Consensus 273 ~i~~~------~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~ 326 (337)
++|.+ ++.++++++++.++++.|.+++.+.++|+|++|...|+++.+|.++...
T Consensus 81 ~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~~~Giit~~dil~~l~ 140 (144)
T 2nyc_A 81 EALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYIL 140 (144)
T ss_dssp HHHHHCC------CEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHHHH
T ss_pred HHHhcCccccCCCeEECCCCcHHHHHHHHHHCCCCEEEEECCCCCEEEEEEHHHHHHHHH
Confidence 88655 6889999999999999999999999999999999999999988765443
No 44
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=99.55 E-value=4.2e-15 Score=147.70 Aligned_cols=146 Identities=12% Similarity=0.146 Sum_probs=123.6
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----HHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCC
Q 019653 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (337)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~g~l~-----~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~ 238 (337)
.+|++||...+.. .+..|.+. +++++++.+++++ +++|++ +++++++++++. ++++.|.++++
T Consensus 54 ~vt~~eLa~av~~----~Gg~G~i~~~~~~e~~~~~i~~v~~~-----~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~ 121 (491)
T 1zfj_A 54 TVTGSKMAIAIAR----AGGLGVIHKNMSITEQAEEVRKVKRS-----ENGVII--DPFFLTPEHKVS-EAEELMQRYRI 121 (491)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECCSSCHHHHHHHHHHHHHH-----TTTTSS--SCCCBCSSSBHH-HHHHHHHHTTC
T ss_pred hccHHHHHHHHHH----cCCceEEeCCCCHHHHHHHHHHHhhH-----HhcCcC--CCeEECCCCcHH-HHHHHHHHcCC
Confidence 4678899988863 33334454 6788888887754 679986 788899999998 99999999999
Q ss_pred cEEEEEc--CCCCcEeEEeEhhhhhhcCCCCCCCccccccc-cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCC
Q 019653 239 SRVPVYY--EEPTNIIGLILVKNLLTIHPEDEVPVKSVTIR-RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQ 315 (337)
Q Consensus 239 sr~PV~~--~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~-~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~ 315 (337)
+++||+| ++ ++++|+|+.+|++... ..+.+++++|.+ ++.++++++++.++++.|++++.+.++|+|++|...|+
T Consensus 122 ~~~pVvd~~~~-~~lvGivt~~Dl~~~~-~~~~~v~~im~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVVd~~g~lvGi 199 (491)
T 1zfj_A 122 SGVPIVETLAN-RKLVGIITNRDMRFIS-DYNAPISEHMTSEHLVTAAVGTDLETAERILHEHRIEKLPLVDNSGRLSGL 199 (491)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHHHCS-CSSSBTTTSCCCSCCCCEETTCCHHHHHHHHHHTTCSEEEEECTTSBEEEE
T ss_pred CEEEEEEeCCC-CEEEEEEEHHHHhhhc-cCCCcHHHHcCCCCCEEECCCCCHHHHHHHHHHcCCCEEEEEcCCCcEEEE
Confidence 9999998 54 8999999999998753 345789999776 88999999999999999999999999999999999999
Q ss_pred CCCCCCcc
Q 019653 316 PASNPASK 323 (337)
Q Consensus 316 ~~~~~~~~ 323 (337)
+|..|.++
T Consensus 200 vt~~Dil~ 207 (491)
T 1zfj_A 200 ITIKDIEK 207 (491)
T ss_dssp EEHHHHHH
T ss_pred EEHHHHHH
Confidence 99876544
No 45
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=99.55 E-value=1.3e-15 Score=127.55 Aligned_cols=119 Identities=13% Similarity=0.129 Sum_probs=103.3
Q ss_pred cccccccccC----ceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC-----CCCCCcccc
Q 019653 204 KTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP-----EDEVPVKSV 274 (337)
Q Consensus 204 ~~V~dIMtpr----~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~-----~~~~~v~~i 274 (337)
.+|+|+|+|+ .++.++++++++. ++++.|.+++++.+||.+ + ++++|+|+.+|+++... ....+++++
T Consensus 7 ~~v~dim~~~~~~~~~~~~v~~~~~~~-~a~~~~~~~~~~~~~V~~-~-~~~~Givt~~dl~~~~~~~~~~~~~~~v~~~ 83 (157)
T 4fry_A 7 TTVAQILKAKPDSGRTIYTVTKNDFVY-DAIKLMAEKGIGALLVVD-G-DDIAGIVTERDYARKVVLQERSSKATRVEEI 83 (157)
T ss_dssp CBHHHHHHHSTTTTCCCCEEETTSBHH-HHHHHHHHHTCSEEEEES-S-SSEEEEEEHHHHHHHSGGGTCCSSSCBHHHH
T ss_pred HHHHHHHhcccccCCCCeEECCCCcHH-HHHHHHHHcCCCEEEEee-C-CEEEEEEEHHHHHHHHHhccCCccccCHHHH
Confidence 5799999987 6889999999998 999999999999999964 3 89999999999987531 134678899
Q ss_pred ccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccC
Q 019653 275 TIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAY 326 (337)
Q Consensus 275 ~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~ 326 (337)
|.+++.++++++++.++++.|.+++.+.++|+| +|...|+++.+|.++...
T Consensus 84 m~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~~~Giit~~dil~~l~ 134 (157)
T 4fry_A 84 MTAKVRYVEPSQSTDECMALMTEHRMRHLPVLD-GGKLIGLISIGDLVKSVI 134 (157)
T ss_dssp SBSSCCCBCTTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHHHHH
T ss_pred cCCCCcEECCCCcHHHHHHHHHHcCCCEEEEEE-CCEEEEEEEHHHHHHHHH
Confidence 888899999999999999999999999999999 699999999877655443
No 46
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=99.55 E-value=1.5e-15 Score=130.32 Aligned_cols=119 Identities=16% Similarity=0.228 Sum_probs=102.5
Q ss_pred cccccccccccCce--EEEE--eCCCCchHHHHHHHHhcCCcEEEEE--cCCCCcEeEEeEhhhhhhcCC----------
Q 019653 202 TEKTASDAMTPIAE--TFAI--DINAKLDKELMNLILEKGHSRVPVY--YEEPTNIIGLILVKNLLTIHP---------- 265 (337)
Q Consensus 202 ~~~~V~dIMtpr~~--v~~v--~~~~~l~~~~~~~l~~~~~sr~PV~--~~~~~~ivGiv~~kDll~~~~---------- 265 (337)
.+.+|+|+|+|..+ +.++ ++++++. ++++.|.+++++.+||+ |++ ++++|+|+.+|++....
T Consensus 9 ~~~~v~dim~~~~~~~~~~v~~~~~~~~~-~a~~~~~~~~~~~~pVv~~d~~-~~lvGiit~~dl~~~~~~~~~~~~~~~ 86 (185)
T 2j9l_A 9 HKTLAMDVMKPRRNDPLLTVLTQDSMTVE-DVETIISETTYSGFPVVVSRES-QRLVGFVLRRDLIISIENARKKQDGVV 86 (185)
T ss_dssp CCCBHHHHSBSCTTSCCCCCEESSCEEHH-HHHHHHHHCCCSEEEEESCTTT-CBEEEEEEHHHHHHHHHHHHTSCSCCC
T ss_pred ccCcHHHHhcccccCceEEEecCCCccHH-HHHHHHHhcCCCceeEEEECCC-CeEEEEEEHHHHHHHHHhhcccCCCcc
Confidence 57899999998643 6677 9999998 99999999999999999 444 89999999999986421
Q ss_pred ------------------CCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 266 ------------------EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 266 ------------------~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
....++.++|.+++.++++++++.++++.|.+++.+.++|+| +|...|++|++|.++
T Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~v~~im~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd-~g~~vGiit~~dll~ 161 (185)
T 2j9l_A 87 STSIIYFTEHSPPLPPYTPPTLKLRNILDLSPFTVTDLTPMEIVVDIFRKLGLRQCLVTH-NGRLLGIITKKDVLK 161 (185)
T ss_dssp TTCEEECSSSCCCCCTTCCCCEECGGGEESSCCEEETTSBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHH
T ss_pred ccceeecccCCcccccccccCccHHHhhCcCCeEeCCCCCHHHHHHHHHhCCCcEEEEEE-CCEEEEEEEHHHHHH
Confidence 124568898778999999999999999999999999999999 799999999976544
No 47
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=99.54 E-value=2.1e-15 Score=125.87 Aligned_cols=118 Identities=14% Similarity=0.156 Sum_probs=101.7
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC-----CCCCccccc
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKSVT 275 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~i~ 275 (337)
+.+.+|+++ .++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|++..... .+.++.++|
T Consensus 20 l~~~~v~~~----~~~~~v~~~~~~~-~a~~~m~~~~~~~~pVvd~~-~~~vGivt~~dl~~~~~~~~~~~~~~~v~~~m 93 (152)
T 2uv4_A 20 LEELQIGTY----ANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKAL 93 (152)
T ss_dssp HHHHTCSBC----SSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEHHHHHHHHHCSSCCCTTSBGGGGG
T ss_pred HHHccCCcc----CCceEeCCCCcHH-HHHHHHHHcCCceEeEECCC-CcEEEEEeHHHHHHHhcchhhhhhcchHHHHH
Confidence 366778887 3677899999998 99999999999999999876 899999999999874321 245688886
Q ss_pred c------ccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 276 I------RRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 276 ~------~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
. +++.++++++++.++++.|.+++.+.++|+|++|...|+++.+|.++.
T Consensus 94 ~~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~lpVvd~~g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 94 QHRSHYFEGVLKCYLHETLETIINRLVEAEVHRLVVVDENDVVKGIVSLSDILQA 148 (152)
T ss_dssp GTCCHHHHTCSEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred hhhhcccCCCeEECCCCcHHHHHHHHHHcCCeEEEEECCCCeEEEEEEHHHHHHH
Confidence 4 788999999999999999999999999999999999999998876543
No 48
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.54 E-value=2.7e-15 Score=138.50 Aligned_cols=145 Identities=15% Similarity=0.199 Sum_probs=119.4
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEE
Q 019653 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (337)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV 243 (337)
.+|.+|+...+.. +.+ ..+...+.+++.+.+|+++|++ ++.++++++++. ++++.|.+++++++||
T Consensus 64 ivT~~Di~~~~~~----~~~-------~~~~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpV 129 (296)
T 3ddj_A 64 LLTTRDLLSTVES----YCK-------DSCSQGDLYHISTTPIIDYMTP--NPVTVYNTSDEF-TAINIMVTRNFGSLPV 129 (296)
T ss_dssp EEEHHHHHGGGTT----CC----------CCHHHHHHHHTSBGGGTSEE--SCCCEETTSCHH-HHHHHHHHHTCSEEEE
T ss_pred EEeHHHHHHHhcc----ccc-------ccccchhhHHHhcccHHHhccC--CCEEEcCCCCHH-HHHHHHHHcCCCEEEE
Confidence 4778888776531 110 0234555566778899999997 677899999998 9999999999999999
Q ss_pred EcCCCCcEeEEeEhhhhhhcCC--CCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCC
Q 019653 244 YYEEPTNIIGLILVKNLLTIHP--EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPA 321 (337)
Q Consensus 244 ~~~~~~~ivGiv~~kDll~~~~--~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~ 321 (337)
+|++ ++++|+++.+|++.... ....+++++|.+++.++++++++.++++.|.+++.+.++|+|++|...|.++..|.
T Consensus 130 vd~~-~~lvGivt~~dl~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~m~~~~~~~~~Vvd~~~~~~Givt~~dl 208 (296)
T 3ddj_A 130 VDIN-DKPVGIVTEREFLLLYKDLDEIFPVKVFMSTKVQTIYKEVRLDQAVKLMLRRGFRRLPVIDDDNKVVGIVTVVNA 208 (296)
T ss_dssp ECTT-SCEEEEEEHHHHGGGGGGSCCCCBHHHHSBCSCCCEETTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHH
T ss_pred EcCC-CcEEEEEeHHHHHHhhhcccccccHHHhhcCCCeEECCCCCHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHH
Confidence 9876 89999999999987542 23457889988899999999999999999999999999999999999999998776
Q ss_pred cc
Q 019653 322 SK 323 (337)
Q Consensus 322 ~~ 323 (337)
++
T Consensus 209 ~~ 210 (296)
T 3ddj_A 209 IK 210 (296)
T ss_dssp HH
T ss_pred HH
Confidence 44
No 49
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=99.52 E-value=5.9e-15 Score=147.07 Aligned_cols=146 Identities=14% Similarity=0.178 Sum_probs=118.2
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----HHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCC
Q 019653 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (337)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~g~l~-----~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~ 238 (337)
.+|++++...+... +..|.+. +++.+++.++.. .+++|++ +++++++++++. ++++.+.++++
T Consensus 77 tvTe~~lAia~a~~----GgiGvIh~~~~~~~q~~~V~~V~~-----~~~~m~~--d~v~l~~~~tv~-ea~~~m~~~~~ 144 (511)
T 3usb_A 77 TVTEADMAIAMARQ----GGLGIIHKNMSIEQQAEQVDKVKR-----SESGVIS--DPFFLTPEHQVY-DAEHLMGKYRI 144 (511)
T ss_dssp TTCSHHHHHHHHHH----TCEEEECSSSCHHHHHHHHHHHHT-----SSSCSSS--SCCCBCTTSBHH-HHHHHHHHHCC
T ss_pred hhcHHHHHHHHHhc----CCceeecccCCHHHHHHHHHHhhc-----ccccccc--CCEEECCCCCHH-HHHHHHHHcCC
Confidence 46889987766532 2223333 445556777654 4567764 778899999998 99999999999
Q ss_pred cEEEEEcC--CCCcEeEEeEhhhhhhcCCCCCCCccccccc-cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCC
Q 019653 239 SRVPVYYE--EPTNIIGLILVKNLLTIHPEDEVPVKSVTIR-RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQ 315 (337)
Q Consensus 239 sr~PV~~~--~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~-~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~ 315 (337)
+++||+|+ + ++++|+|+.+|++.. ...+.++.++|.+ ++.++++++++.++++.|++++.+.++|+||+|...|+
T Consensus 145 s~~pVvd~g~~-~~lvGiVt~rDl~~~-~~~~~~V~~vM~~~~~vtv~~~~~l~eal~~m~~~~i~~lpVVDe~g~l~Gi 222 (511)
T 3usb_A 145 SGVPVVNNLDE-RKLVGIITNRDMRFI-QDYSIKISDVMTKEQLITAPVGTTLSEAEKILQKYKIEKLPLVDNNGVLQGL 222 (511)
T ss_dssp SEEEEESCTTT-CBEEEEEEHHHHTTC-CCSSSBHHHHCCCCCCCCEETTCCHHHHHHHHHHHTCSEEEEECTTSBEEEE
T ss_pred cEEEEEecCCC-CEEEEEEEehHhhhh-ccCCCcHHHhcccCCCEEECCCCCHHHHHHHHHHcCCCEEEEEeCCCCEeee
Confidence 99999987 5 899999999999863 3345689999776 89999999999999999999999999999999999999
Q ss_pred CCCCCCcc
Q 019653 316 PASNPASK 323 (337)
Q Consensus 316 ~~~~~~~~ 323 (337)
+|+.|.++
T Consensus 223 IT~~Dil~ 230 (511)
T 3usb_A 223 ITIKDIEK 230 (511)
T ss_dssp EEHHHHHH
T ss_pred ccHHHHHH
Confidence 99866543
No 50
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=99.52 E-value=3.1e-15 Score=125.73 Aligned_cols=124 Identities=10% Similarity=0.112 Sum_probs=101.7
Q ss_pred HhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcC-CCCcEeEEeEhhhhhhcCCC--------
Q 019653 196 AGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYE-EPTNIIGLILVKNLLTIHPE-------- 266 (337)
Q Consensus 196 ~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~-~~~~ivGiv~~kDll~~~~~-------- 266 (337)
.+.+.+.+.+|+|+|++ ++.+++.++++. ++++.|.+++++.+||+|+ +.++++|+|+.+|++.....
T Consensus 5 ~~~~~~~~~~v~dim~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pVvd~~~~~~~~Givt~~dl~~~~~~~~~~~~~~ 81 (164)
T 2pfi_A 5 GRNIGSHHVRVEHFMNH--SITTLAKDTPLE-EVVKVVTSTDVTEYPLVESTESQILVGIVQRAQLVQALQAEPPSRAPG 81 (164)
T ss_dssp -----CCSCBHHHHCBC--CCCCEETTCBHH-HHHHHHHTCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHC-------C
T ss_pred cccccccCCCHHHHcCC--CCeEECCCCcHH-HHHHHHHhCCCCceeEEecCCCCEEEEEEEHHHHHHHHHhhccccCCc
Confidence 34556788999999987 677899999998 9999999999999999986 24899999999999864311
Q ss_pred CCCCcccccccc------CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 267 DEVPVKSVTIRR------IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 267 ~~~~v~~i~~~~------~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
...++.++|.++ +.++++++++.++++.|.+++.+.++|+| +|...|++|++|.++
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~lpVvd-~g~l~Giit~~dil~ 143 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLHQAQNLFKLLNLQSLFVTS-RGRAVGCVSWVEMKK 143 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHHHHHHHHHHTTCSEEEEEE-TTEEEEEEEHHHHHH
T ss_pred ccchhhhhhcccccccCCceEECCCCcHHHHHHHHHHhCCCEEEEEE-CCEEEEEEEHHHHHH
Confidence 124577776555 68899999999999999999999999999 699999999977654
No 51
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=99.50 E-value=3e-15 Score=149.08 Aligned_cols=151 Identities=8% Similarity=0.062 Sum_probs=20.0
Q ss_pred cccHHHHHHHHHhhcccccCCCCC----C-HHHHHHHHhhhcccccccccc-cccCceEEEEeCCCCchHHHHHHHHhcC
Q 019653 164 LFRRAELKTLVNLHGNEAGKGGEL----T-HDETTIIAGALELTEKTASDA-MTPIAETFAIDINAKLDKELMNLILEKG 237 (337)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~g~l----~-~~E~~~l~~~l~l~~~~V~dI-Mtpr~~v~~v~~~~~l~~~~~~~l~~~~ 237 (337)
..+++++...+... +..|.+ + +++++++.++.. .++ |+| +++++++++++. ++++.|.+++
T Consensus 61 ~vt~~~la~~la~~----gg~G~I~~~~~~e~~~~~v~~V~~------~e~gM~~--~~~~v~~~~tv~-eal~~m~~~~ 127 (503)
T 1me8_A 61 SVSGEKMAIALARE----GGISFIFGSQSIESQAAMVHAVKN------FKAGFVV--SDSNVKPDQTFA-DVLAISQRTT 127 (503)
T ss_dssp TTCSHHHHHHHHHT----TCEEEECCSSCHHHHHHHHHHHHT------TTC-----------------------------
T ss_pred hhhHHHHHHHHHhC----CCcceeeCCCCHHHHHHHHhhhhh------cccCccc--CCeEECCCCcHH-HHHHHHHHcC
Confidence 46788988777632 111222 2 466777766543 456 987 788999999998 9999999999
Q ss_pred CcEEEEEcCC--CCcEeEEeEhhhhhhcCCCCCCCcccccccc--CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCC
Q 019653 238 HSRVPVYYEE--PTNIIGLILVKNLLTIHPEDEVPVKSVTIRR--IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNA 313 (337)
Q Consensus 238 ~sr~PV~~~~--~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~--~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~ 313 (337)
++++||+|++ .++++|+|+.+|++......+.+++++|.++ +.++++++++.++++.|++++.+.++|+||+|...
T Consensus 128 ~s~~pVvd~~~~~g~lvGiVt~~Dl~~~~~~~~~~V~diM~~~~~~~tv~~~~sl~ea~~~m~~~~i~~lpVVDe~g~lv 207 (503)
T 1me8_A 128 HNTVAVTDDGTPHGVLLGLVTQRDYPIDLTQTETKVSDMMTPFSKLVTAHQDTKLSEANKIIWEKKLNALPIIDDDQHLR 207 (503)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceEEEEEECCCcCCeEEEEEEHHHHHhhhccccCcHHHHhCCCCCCEEEcCCCcHHHHHHHHHHcCCCEEEEEcCCCeEE
Confidence 9999999864 3789999999999863222356789997666 89999999999999999999999999999999999
Q ss_pred CCCCCCCCccccCC
Q 019653 314 EQPASNPASKSAYG 327 (337)
Q Consensus 314 ~~~~~~~~~~~~~~ 327 (337)
|++|++|.++....
T Consensus 208 GiIT~~Dil~~~~~ 221 (503)
T 1me8_A 208 YIVFRKDYDRSQVC 221 (503)
T ss_dssp --------------
T ss_pred EEEEecHHHHhhhc
Confidence 99999998876654
No 52
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.50 E-value=5e-15 Score=134.90 Aligned_cols=148 Identities=14% Similarity=0.169 Sum_probs=116.8
Q ss_pred cccHHHHHHHHHhhcccccCCCCCCHHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEE
Q 019653 164 LFRRAELKTLVNLHGNEAGKGGELTHDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPV 243 (337)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~g~l~~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV 243 (337)
.+|.+|+...+.. +.+.+.++.. ...+.++..+.+|+++|++ ++.++++++++. ++++.|.+++++++||
T Consensus 51 ivt~~di~~~~~~----~~~~~~~~~~---~~~~~~~~~~~~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~~V 120 (280)
T 3kh5_A 51 IITSMDIVDFMGG----GSKYNLIREK---HERNFLAAINEPVREIMEE--NVITLKENADID-EAIETFLTKNVGGAPI 120 (280)
T ss_dssp EEEHHHHHHHTTT----SGGGHHHHTT---STTCHHHHTTSBGGGTSBC--SCCCEETTCBHH-HHHHHHHHTTCSEEEE
T ss_pred EEEHHHHHHHhcc----cchhhhhhhc---cccchhHHhhhhHHHhcCC--CCEEECCCCCHH-HHHHHHHhCCCCEEEE
Confidence 4788998887641 1111111111 1223344457899999996 778899999998 9999999999999999
Q ss_pred EcCCCCcEeEEeEhhhhhhcCC---CCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCC
Q 019653 244 YYEEPTNIIGLILVKNLLTIHP---EDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNP 320 (337)
Q Consensus 244 ~~~~~~~ivGiv~~kDll~~~~---~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~ 320 (337)
+|++ ++++|+++.+|+++... ....+++++|.+++.++++++++.++++.|++++.+.++|+ ++|+..|.++..|
T Consensus 121 vd~~-~~~~Givt~~dl~~~~~~~~~~~~~v~~~m~~~~~~v~~~~~l~~~~~~~~~~~~~~~~Vv-~~~~~~Givt~~d 198 (280)
T 3kh5_A 121 VNDE-NQLISLITERDVIRALLDKIDENEVIDDYITRDVIVATPGERLKDVARTMVRNGFRRLPVV-SEGRLVGIITSTD 198 (280)
T ss_dssp ECTT-CBEEEEEEHHHHHHHHGGGSCTTCBSGGGCBCSCCCBCTTCBHHHHHHHHHHHTCSEEEEE-ETTEEEEEEEHHH
T ss_pred EcCC-CEEEEEEEHHHHHHHHhhcCCCCCCHHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEE-ECCEEEEEEEHHH
Confidence 9876 89999999999987532 12347889988899999999999999999999999999999 6899999999877
Q ss_pred Ccc
Q 019653 321 ASK 323 (337)
Q Consensus 321 ~~~ 323 (337)
.++
T Consensus 199 l~~ 201 (280)
T 3kh5_A 199 FIK 201 (280)
T ss_dssp HHH
T ss_pred HHH
Confidence 544
No 53
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=99.49 E-value=3.2e-14 Score=125.99 Aligned_cols=115 Identities=13% Similarity=0.031 Sum_probs=103.0
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccCceeC
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVP 283 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~~~V~ 283 (337)
-+++++|++ ++.++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|+..... +.+++++|.+++.+++
T Consensus 13 ~~~~~~~~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~l~Givt~~dl~~~~~--~~~v~~im~~~~~~v~ 86 (213)
T 1vr9_A 13 MKVKKWVTQ--DFPMVEESATVR-ECLHRMRQYQTNECIVKDRE-GHFRGVVNKEDLLDLDL--DSSVFNKVSLPDFFVH 86 (213)
T ss_dssp CBGGGGCBS--CSCEEETTCBHH-HHHHHHHHTTSSEEEEECTT-SBEEEEEEGGGGTTSCT--TSBSGGGCBCTTCCEE
T ss_pred cCHHHhhcC--CCeEECCCCcHH-HHHHHHHHCCCCEEEEEcCC-CEEEEEEEHHHHHhhcC--CCcHHHHccCCCEEEC
Confidence 468899975 778899999998 99999999999999999865 89999999999987654 4578999888899999
Q ss_pred CCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 284 ETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 284 ~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
+++++.++++.|.+++.+.++|+|++|...|++|..|.++.
T Consensus 87 ~~~~l~~a~~~m~~~~~~~lpVvd~~g~lvGiit~~Dil~~ 127 (213)
T 1vr9_A 87 EEDNITHALLLFLEHQEPYLPVVDEEMRLKGAVSLHDFLEA 127 (213)
T ss_dssp TTSBHHHHHHHHHHCCCSEEEEECTTCBEEEEEEHHHHHHH
T ss_pred CCCcHHHHHHHHHHhCCCEEEEEcCCCEEEEEEEHHHHHHH
Confidence 99999999999999999999999999999999999776543
No 54
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=99.48 E-value=4.6e-15 Score=147.26 Aligned_cols=144 Identities=15% Similarity=0.213 Sum_probs=23.4
Q ss_pred cccHHHHHHHHHhhcccccCCCCCC-----HHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCC
Q 019653 164 LFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGH 238 (337)
Q Consensus 164 ~~s~eEL~~lv~~~~~e~~~~g~l~-----~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~ 238 (337)
..+++|+...+.. .+..|.+. +++++++.+++++++ +|++ +++++++++++. ++++.+.++++
T Consensus 57 ~vt~~ela~ava~----~GglG~i~~~~~~e~~~~~I~~v~~~~~-----~m~~--~~~~v~~~~tv~-ea~~~~~~~~~ 124 (486)
T 2cu0_A 57 TVTEWEMAVAMAR----EGGLGVIHRNMGIEEQVEQVKRVKRAER-----LIVE--DVITIAPDETVD-FALFLMEKHGI 124 (486)
T ss_dssp TTCSHHHHHHHHH----TTCEEEECSSSCHHHHHHHHHHHHTCC------------------------------------
T ss_pred eecHHHHHHHHHh----cCCceeecCCCCHHHHHHHHHhhcchhh-----cccc--CceEECCCCCHH-HHHHHHHHcCC
Confidence 4678888887763 22223443 577889999987654 6874 889999999998 99999999999
Q ss_pred cEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCC
Q 019653 239 SRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPAS 318 (337)
Q Consensus 239 sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~ 318 (337)
+++||+++ ++++|+|+.+|++. ..+.++.++|.+++.++++++++.++++.|++++.+.++|+|++|+..|++|.
T Consensus 125 ~~~pVvd~--~~lvGivt~~Dl~~---~~~~~v~~im~~~~~~v~~~~~l~eal~~m~~~~~~~lpVVde~g~lvGiiT~ 199 (486)
T 2cu0_A 125 DGLPVVED--EKVVGIITKKDIAA---REGKLVKELMTKEVITVPESIEVEEALKIMIENRIDRLPVVDERGKLVGLITM 199 (486)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cEEEEEEC--CEEEEEEEHHHhcc---CCCCCHHHHccCCCeEECCcCcHHHHHHHHHHcCCCEEEEEecCCeEEEEEEH
Confidence 99999986 89999999999986 34567899987789999999999999999999999999999999999999999
Q ss_pred CCCccc
Q 019653 319 NPASKS 324 (337)
Q Consensus 319 ~~~~~~ 324 (337)
.|.++.
T Consensus 200 ~Dil~~ 205 (486)
T 2cu0_A 200 SDLVAR 205 (486)
T ss_dssp ------
T ss_pred HHHHHh
Confidence 887664
No 55
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=99.48 E-value=2.7e-14 Score=128.67 Aligned_cols=118 Identities=14% Similarity=0.152 Sum_probs=99.0
Q ss_pred ccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC----------------
Q 019653 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE---------------- 266 (337)
Q Consensus 203 ~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~---------------- 266 (337)
..+|+|+|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+++.+|+++....
T Consensus 6 ~~~v~~im~~--~~~~v~~~~~~~-~a~~~m~~~~~~~lpVvd~~-~~l~Giit~~di~~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 3l2b_A 6 KLKVEDLEMD--KIAPLAPEVSLK-MAWNIMRDKNLKSIPVADGN-NHLLGMLSTSNITATYMDIWDSNILAKSATSLDN 81 (245)
T ss_dssp CCBGGGSCCB--CCCCBCTTCBHH-HHHHHHHHTTCSEEEEECTT-CBEEEEEEHHHHHHHHHCCCCTTHHHHTTCCHHH
T ss_pred cCcHHHhcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHhhhhhhhhhccCCHHH
Confidence 4689999985 678899999998 99999999999999999876 899999999999863200
Q ss_pred --------------------------------------------------------------------------------
Q 019653 267 -------------------------------------------------------------------------------- 266 (337)
Q Consensus 267 -------------------------------------------------------------------------------- 266 (337)
T Consensus 82 v~~~l~~~~l~~~~~~~~~~g~~~i~a~~~~~~~~~~~~~~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~ 161 (245)
T 3l2b_A 82 ILDTLSAEAQNINEERKVFPGKVVVAAMQAESLKEFISEGDIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK 161 (245)
T ss_dssp HHHHTTCEEEECCTTCCCCCSCEEECCSCGGGGGGTCCTTCEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH
T ss_pred HHHHhCCEEEeccCCcceeeeeEEEEeCChHHHHhcCCCCCEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH
Confidence
Q ss_pred ---------------------CCCCcccccc-ccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 267 ---------------------DEVPVKSVTI-RRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 267 ---------------------~~~~v~~i~~-~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
...+++++|. +++.++++++++.++++.|.+++.+.+||+|++|...|+++++|.++.
T Consensus 162 ~~~~~~i~t~~d~~~~~~~~~~~~~v~~im~~~~~~~~~~~~~~~~~~~~m~~~~~~~~pVvd~~~~~~Giit~~dll~~ 241 (245)
T 3l2b_A 162 KNNITVITTPHDSFTASRLIVQSLPVDYVMTKDNLVAVSTDDLVEDVKVTMSETRYSNYPVIDENNKVVGSIARFHLIST 241 (245)
T ss_dssp HHTCEEEECSSCHHHHHHHGGGGSBHHHHSBCTTCCCEETTSBHHHHHHHHHHHCCSEEEEECTTCBEEEEEECC-----
T ss_pred HcCCeEEEeCCChHHHHHHHhcCCceeeEecCCccEEECCCCcHHHHHHHHHhcCCceEEEEcCCCeEEEEEEHHHhhch
Confidence 0134667777 889999999999999999999999999999999999999999998653
No 56
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=99.48 E-value=4.5e-15 Score=147.30 Aligned_cols=147 Identities=16% Similarity=0.214 Sum_probs=23.5
Q ss_pred ccccHHHHHHHHHhhcccccCCCCCC-----HHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcC
Q 019653 163 ALFRRAELKTLVNLHGNEAGKGGELT-----HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG 237 (337)
Q Consensus 163 ~~~s~eEL~~lv~~~~~e~~~~g~l~-----~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~ 237 (337)
..+|++++...+... +..|.+. +++.+++.++ ++++++|++ +++++++++++. ++++.+.+++
T Consensus 51 ~tVTe~~lA~ala~~----GGiGvI~~~~~~e~~a~~v~~v-----k~~~~~m~~--~~v~v~~~~tv~-ea~~~m~~~~ 118 (490)
T 4avf_A 51 DTVTEARLAIAMAQE----GGIGIIHKNMGIEQQAAEVRKV-----KKHETAIVR--DPVTVTPSTKII-ELLQMAREYG 118 (490)
T ss_dssp TTTCSHHHHHHHHHH----TSEEEECCSSCHHHHHHHHHHH-----HHCCC-----------------------------
T ss_pred hhhCHHHHHHHHHHc----CCCccccCCCCHHHHHHHhhhh-----cccccCccc--CceEeCCCCcHH-HHHHHHHHhC
Confidence 347889999877632 2224443 5667777776 457889984 788999999998 9999999999
Q ss_pred CcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCcccccc-c-cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCC
Q 019653 238 HSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI-R-RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQ 315 (337)
Q Consensus 238 ~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~-~-~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~ 315 (337)
++++||+| + ++++|+|+.+|+.... ..+.++.++|. + ++.++++++++.++++.|++++.+.++|+||+|...|+
T Consensus 119 ~s~~pVvd-~-g~lvGIVt~rDl~~~~-~~~~~V~~vMtp~~~~vtv~~~~~l~ea~~~m~~~~i~~lpVVDe~g~lvGi 195 (490)
T 4avf_A 119 FSGFPVVE-Q-GELVGIVTGRDLRVKP-NAGDTVAAIMTPKDKLVTAREGTPLEEMKAKLYENRIEKMLVVDENFYLRGL 195 (490)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred CCEEEEEE-C-CEEEEEEEhHHhhhcc-ccCCcHHHHhccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEEcCCCcEEEE
Confidence 99999998 4 8999999999997432 34567999976 4 68999999999999999999999999999999999999
Q ss_pred CCCCCCccc
Q 019653 316 PASNPASKS 324 (337)
Q Consensus 316 ~~~~~~~~~ 324 (337)
+|+.|.++.
T Consensus 196 IT~~Dil~~ 204 (490)
T 4avf_A 196 VTFRDIEKA 204 (490)
T ss_dssp ---------
T ss_pred EehHHhhhh
Confidence 999988764
No 57
>3kh5_A Protein MJ1225; AMPK, AMP, ADP, ATP, CBS domain, archaea, unknown function; HET: ADP AMP; 2.10A {Methanocaldococcus jannaschii} PDB: 3lfz_A*
Probab=99.46 E-value=6.7e-14 Score=127.38 Aligned_cols=115 Identities=12% Similarity=0.174 Sum_probs=99.0
Q ss_pred ccccc-cccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCC----------------
Q 019653 205 TASDA-MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED---------------- 267 (337)
Q Consensus 205 ~V~dI-Mtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~---------------- 267 (337)
++++. |++ +++++++++++. ++++.|.+++++++||++++.++++|+++.+|++.....+
T Consensus 4 ~v~~~i~~~--~~~~v~~~~sl~-~a~~~m~~~~~~~lpV~d~~~~~~~Givt~~di~~~~~~~~~~~~~~~~~~~~~~~ 80 (280)
T 3kh5_A 4 RVMKIAQNK--KIVTVYPTTTIR-KALMTMNENKYRRLPVVNAGNNKVVGIITSMDIVDFMGGGSKYNLIREKHERNFLA 80 (280)
T ss_dssp BGGGTSCCS--CCCCBCTTSBHH-HHHHHHHHHCCCEEEEECTTTCBEEEEEEHHHHHHHTTTSGGGHHHHTTSTTCHHH
T ss_pred hHHHHhcCC--CcEEECCCCcHH-HHHHHHHhCCCcEeeEEECCCCeEEEEEEHHHHHHHhcccchhhhhhhccccchhH
Confidence 45554 544 788999999998 9999999999999999987458999999999998754211
Q ss_pred --CCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCc
Q 019653 268 --EVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPAS 322 (337)
Q Consensus 268 --~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~ 322 (337)
+.+++++|.+++.++++++++.++++.|++++.+.++|+|++|+..|+++..|.+
T Consensus 81 ~~~~~v~~im~~~~~~v~~~~~~~~a~~~~~~~~~~~~~Vvd~~~~~~Givt~~dl~ 137 (280)
T 3kh5_A 81 AINEPVREIMEENVITLKENADIDEAIETFLTKNVGGAPIVNDENQLISLITERDVI 137 (280)
T ss_dssp HTTSBGGGTSBCSCCCEETTCBHHHHHHHHHHTTCSEEEEECTTCBEEEEEEHHHHH
T ss_pred HhhhhHHHhcCCCCEEECCCCCHHHHHHHHHhCCCCEEEEEcCCCEEEEEEEHHHHH
Confidence 3478899888899999999999999999999999999999999999999986643
No 58
>3t4n_C Nuclear protein SNF4; CBS domain, nucleotide binding, cytosol, protein binding; HET: ADP; 2.30A {Saccharomyces cerevisiae} PDB: 3tdh_C* 3te5_C* 2qlv_C
Probab=99.43 E-value=3.3e-14 Score=132.79 Aligned_cols=125 Identities=13% Similarity=0.136 Sum_probs=107.8
Q ss_pred cccccccccc---cccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC-----CCCCc
Q 019653 200 ELTEKTASDA---MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPV 271 (337)
Q Consensus 200 ~l~~~~V~dI---Mtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v 271 (337)
.+.+.+++++ |++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++...+ .+.++
T Consensus 183 ~~~~~~v~~~~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v 258 (323)
T 3t4n_C 183 HFLKIPIGDLNIITQD--NMKSCQMTTPVI-DVIQMLTQGRVSSVPIIDEN-GYLINVYEAYDVLGLIKGGIYNDLSLSV 258 (323)
T ss_dssp GGCCSBGGGTTCSBCT--TCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETTHHHHHHHTTHHHHTTSBH
T ss_pred hhhhCcHHHcCCCCCC--CcEEECCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEeHHHHHHHHhhchhhhccCCH
Confidence 3556789999 753 778899999998 99999999999999999876 899999999999875322 13578
Q ss_pred cccccc------cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCC
Q 019653 272 KSVTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGR 328 (337)
Q Consensus 272 ~~i~~~------~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~ 328 (337)
+++|.+ ++.++++++++.++++.|.+++.+.++|+|++|...|++|.+|.++..++.
T Consensus 259 ~~~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~~~l~Giit~~Dil~~l~~~ 321 (323)
T 3t4n_C 259 GEALMRRSDDFEGVYTCTKNDKLSTIMDNIRKARVHRFFVVDDVGRLVGVLTLSDILKYILLG 321 (323)
T ss_dssp HHHGGGSCTTCCCCEEECTTCBHHHHHHHHHHSCCCEEEEECTTSBEEEEEEHHHHHHHHHHC
T ss_pred HHHHhhccccCCCCEEECCCCCHHHHHHHHHHhCCCEEEEECCCCcEEEEEEHHHHHHHHHhc
Confidence 888766 688999999999999999999999999999999999999999887766554
No 59
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.42 E-value=5.1e-14 Score=128.62 Aligned_cols=114 Identities=20% Similarity=0.202 Sum_probs=83.7
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccCceeC
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIPRVP 283 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~~~V~ 283 (337)
++|+++|++ +++++++++++. ++++.+.+++++++||+|++ ++++|+++.+|++.... +.+++++|.+++.+++
T Consensus 1 m~v~~im~~--~~~~v~~~~~~~-~a~~~~~~~~~~~~pV~d~~-~~~~Giv~~~dl~~~~~--~~~v~~~m~~~~~~v~ 74 (282)
T 2yzq_A 1 MRVKTIMTQ--NPVTITLPATRN-YALELFKKYKVRSFPVVNKE-GKLVGIISVKRILVNPD--EEQLAMLVKRDVPVVK 74 (282)
T ss_dssp CBHHHHSEE--SCCCEESSCC-------------CCEEEEECTT-CCEEEEEESSCC------------CCCBSCCCEEE
T ss_pred CchHHhccC--CCeEECCCCcHH-HHHHHHHHcCCCeEEEEcCC-CcEEEEEEHHHHHhhhc--cCCHHHHcCCCCcEEC
Confidence 368999985 688899999998 99999999999999999875 89999999999986543 4578899777789999
Q ss_pred CCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 284 ETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 284 ~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
+++++.++++.|.+++.+.++|+|++|+..|+++.+|.++
T Consensus 75 ~~~~l~~a~~~m~~~~~~~~~Vvd~~~~~~Giit~~di~~ 114 (282)
T 2yzq_A 75 ENDTLKKAAKLMLEYDYRRVVVVDSKGKPVGILTVGDIIR 114 (282)
T ss_dssp TTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHH
T ss_pred CCCcHHHHHHHHHHcCCCEEEEEcCCCEEEEEEEHHHHHH
Confidence 9999999999999999999999999999999999877655
No 60
>3ddj_A CBS domain-containing protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.80A {Sulfolobus solfataricus} SCOP: d.37.1.1 d.37.1.1
Probab=99.40 E-value=5.2e-14 Score=129.79 Aligned_cols=120 Identities=16% Similarity=0.193 Sum_probs=105.4
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC----------CCCC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE----------DEVP 270 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~----------~~~~ 270 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+++.+|+++.... ...+
T Consensus 153 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~~~Givt~~dl~~~~~~~~~~~~~~~~~~~~ 228 (296)
T 3ddj_A 153 DEIFPVKVFMST--KVQTIYKEVRLD-QAVKLMLRRGFRRLPVIDDD-NKVVGIVTVVNAIKQLAKAVDKLDPDYFYGKV 228 (296)
T ss_dssp CCCCBHHHHSBC--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHHHHHHHHTCTHHHHTCB
T ss_pred cccccHHHhhcC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHHHhhcChhhhcCcC
Confidence 446689999975 677899999998 99999999999999999876 899999999999875321 2457
Q ss_pred ccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 271 VKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 271 v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
+.++|.+++.++++++++.++++.|.+++.+.++|+|++|...|++|+.|.++.
T Consensus 229 v~~~m~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~~~Giit~~Dil~~ 282 (296)
T 3ddj_A 229 VKDVMVTNLVTIDELASVNRAAAEMIVKRIGSLLILNKDNTIRGIITERDLLIA 282 (296)
T ss_dssp HHHHSBCCCCBCCTTSBHHHHHHHHHHHTCSEEEEECTTSCEEEEEEHHHHHHH
T ss_pred HHHHhCCCCeEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEcHHHHHHH
Confidence 889888899999999999999999999999999999999999999999876554
No 61
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=99.39 E-value=9e-14 Score=139.28 Aligned_cols=122 Identities=12% Similarity=0.134 Sum_probs=103.5
Q ss_pred ccccccccccccCceEEEEeCC-CCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC----CCCCCCccccc
Q 019653 201 LTEKTASDAMTPIAETFAIDIN-AKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH----PEDEVPVKSVT 275 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~-~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~----~~~~~~v~~i~ 275 (337)
+.+.+|+|+|++ ++++++++ +++. ++++.|.+++++++||+|++.++++|+|+.+|+++.. ...+.++.++|
T Consensus 381 l~~~~V~diM~~--~~vtv~~~~~tv~-ea~~~m~~~~~~~lpVvd~~~g~lvGiVt~~Dll~~l~~~~~~~~~~V~~im 457 (527)
T 3pc3_A 381 WWSLAIAELELP--APPVILKSDATVG-EAIALMKKHRVDQLPVVDQDDGSVLGVVGQETLITQIVSMNRQQSDPAIKAL 457 (527)
T ss_dssp TTTSBGGGGCCC--CCSCCEETTCBHH-HHHHHHHHHTCSEEEEECTTTCCEEEEEEHHHHHHHHHHHCCCTTSBGGGGE
T ss_pred ccCCcHHHhCcC--CCeEEcCCCCcHH-HHHHHHHHcCCCeEEEEECCCCEEEEEEEHHHHHHHHHhccCcCCCcHHHHh
Confidence 567899999985 68889999 9998 9999999999999999983338999999999998642 22356799998
Q ss_pred cccCceeCCCCCHHHHHHHHhhCCCeEEEEEec----CCCCCCCCCCCCCccccCC
Q 019653 276 IRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQ----YNKNAEQPASNPASKSAYG 327 (337)
Q Consensus 276 ~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe----~G~~~~~~~~~~~~~~~~~ 327 (337)
.+++.++++++++.++++.|.+++ +++|+|+ +|...|++|++|.++-...
T Consensus 458 ~~~~~~v~~~~~l~~a~~~m~~~~--~~pVVd~~~~~~g~lvGIVT~~Dll~~l~~ 511 (527)
T 3pc3_A 458 NKRVIRLNESEILGKLARVLEVDP--SVLILGKNPAGKVELKALATKLDVTTFIAA 511 (527)
T ss_dssp ETTCCEEETTSBHHHHHHHHTTCS--EEEEEEECSSSCEEEEEEEEHHHHHHHHHT
T ss_pred cCCCeEECCCCcHHHHHHHHhhCC--EEEEEeCCcccCCeEEEEEEHHHHHHHHHh
Confidence 899999999999999999997665 5799999 5999999999887654443
No 62
>2yzq_A Putative uncharacterized protein PH1780; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; HET: SAM; 1.63A {Pyrococcus horikoshii} SCOP: d.37.1.1 d.37.1.1
Probab=99.37 E-value=1.1e-12 Score=119.71 Aligned_cols=117 Identities=18% Similarity=0.169 Sum_probs=99.9
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhh-cCCC----CCCCcccccc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT-IHPE----DEVPVKSVTI 276 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~-~~~~----~~~~v~~i~~ 276 (337)
.+.+++++|++ ++.++++++++. ++++.|.+++.+++||+|++ ++++|+++.+|+++ ...+ .+.+++++|.
T Consensus 58 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-~~~~Giit~~di~~~~~~~~~~~~~~~v~~~m~ 133 (282)
T 2yzq_A 58 DEEQLAMLVKR--DVPVVKENDTLK-KAAKLMLEYDYRRVVVVDSK-GKPVGILTVGDIIRRYFAKSEKYKGVEIEPYYQ 133 (282)
T ss_dssp ------CCCBS--CCCEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHTTTTCSGGGGCBSTTTSB
T ss_pred ccCCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CEEEEEEEHHHHHHHHHhccCCcccCcHHHHhC
Confidence 35789999986 577899999998 99999999999999999876 78999999999997 5442 2457889887
Q ss_pred ccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCc
Q 019653 277 RRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPAS 322 (337)
Q Consensus 277 ~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~ 322 (337)
+++.++++++++.++++.|.+++.+.++|+|++|...|.++..|.+
T Consensus 134 ~~~~~v~~~~~l~~~~~~~~~~~~~~l~Vvd~~~~~~Giit~~dl~ 179 (282)
T 2yzq_A 134 RYVSIVWEGTPLKAALKALLLSNSMALPVVDSEGNLVGIVDETDLL 179 (282)
T ss_dssp SCCCCEETTSBHHHHHHHHHTCSSSEEEEECTTSCEEEEEEGGGGG
T ss_pred CCCEEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHh
Confidence 8899999999999999999999999999999999999999998887
No 63
>2qrd_G Protein C1556.08C; AMPK, ADP, ATP-binding, kinase, nucleotide-binding, serine/T protein kinase, transferase, CBS domain; HET: ADP ATP; 2.41A {Schizosaccharomyces pombe} PDB: 2qrc_G* 2qr1_G* 2qre_G* 2oox_G* 2ooy_G*
Probab=99.30 E-value=8.8e-13 Score=123.62 Aligned_cols=122 Identities=12% Similarity=0.142 Sum_probs=103.6
Q ss_pred ccccccc---ccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC-----CCCCccc
Q 019653 202 TEKTASD---AMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKS 273 (337)
Q Consensus 202 ~~~~V~d---IMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~ 273 (337)
.+.++++ +|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++...+ .+.++.+
T Consensus 180 ~~~~v~~l~~~m~~--~~~~v~~~~~~~-~~~~~m~~~~~~~~~Vvd~~-~~~~Giit~~dl~~~~~~~~~~~~~~~v~~ 255 (334)
T 2qrd_G 180 LRVPLNQMTIGTWS--NLATASMETKVY-DVIKMLAEKNISAVPIVNSE-GTLLNVYESVDVMHLIQDGDYSNLDLSVGE 255 (334)
T ss_dssp CCCBGGGSSCSBCS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEETHHHHHHHTTSCGGGGGSBHHH
T ss_pred hhCcHHHhCCcccC--CceEECCCCcHH-HHHHHHHHcCCcEEEEEcCC-CcEEEEEEHHHHHHHhhccccccccCcHHH
Confidence 4578889 4864 677899999998 99999999999999999875 799999999999875322 1356778
Q ss_pred cccc------cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCC
Q 019653 274 VTIR------RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYG 327 (337)
Q Consensus 274 i~~~------~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~ 327 (337)
+|.+ ++.++++++++.++++.|.+++.+.++|+|++|...|++|.+|.++...+
T Consensus 256 ~m~~~~~~~~~~~~v~~~~~l~~~~~~m~~~~~~~l~Vvd~~g~l~Giit~~dil~~~~~ 315 (334)
T 2qrd_G 256 ALLKRPANFDGVHTCRATDRLDGIFDAIKHSRVHRLFVVDENLKLEGILSLADILNYIIY 315 (334)
T ss_dssp HHTTCCTTCCCCCEECTTCBHHHHHHHHHHSCCCEEEEECTTCBEEEEEEHHHHHHHHHS
T ss_pred HHhcccccCCCCEEECCCCcHHHHHHHHHHcCCCEEEEECCCCeEEEEEeHHHHHHHHHh
Confidence 8663 78999999999999999999999999999999999999999887654443
No 64
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=99.25 E-value=1.6e-12 Score=118.10 Aligned_cols=120 Identities=13% Similarity=0.067 Sum_probs=97.7
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCC-CCcEeEEeEhhhhhhcCC-------C-----
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE-PTNIIGLILVKNLLTIHP-------E----- 266 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~-~~~ivGiv~~kDll~~~~-------~----- 266 (337)
...+++|+|+|++ +++++.+++++. ++.+.|.+++++++||+|++ .++++|+|+.+||+.... .
T Consensus 9 ~~~~~~v~diMt~--~vvtv~~~~tv~-~~~~lm~~~~~~~~PVVd~~~~~~LvGiIt~~dl~~~l~~~~~~~~~~~~~~ 85 (250)
T 2d4z_A 9 NKYNIQVGDIMVR--DVTSIASTSTYG-DLLHVLRQTKLKFFPFVDTPDTNTLLGSIDRTEVEGLLQRRISAYRRQPAAA 85 (250)
T ss_dssp CCSSCBTTSSSBS--SCCCEETTCBHH-HHHHHHHHCCCSEEEEESCTTTCBEEEEEEHHHHHHHHHHHHHTTSSSCCCC
T ss_pred ccCCCChHHhcCC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEecCCCCeEEEEEEHHHHHHHHHHhhhhhhhhhhhh
Confidence 3467899999986 788999999998 99999999999999999864 257999999999985210 0
Q ss_pred --------------------------------------------------------------------------------
Q 019653 267 -------------------------------------------------------------------------------- 266 (337)
Q Consensus 267 -------------------------------------------------------------------------------- 266 (337)
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (250)
T 2d4z_A 86 AEADEEGRNGETGASFTGEAESSFAYIDQEDAEGQQREGLEAVKVQTEDPRPPSPVPAEEPTQTSGIYQKKQKGTGQVAS 165 (250)
T ss_dssp CCBCCC--------------------------------------------------------------------------
T ss_pred hcccccccccccccccccCCcceeeeccccccccccccCccccCCcccCCccccccccccccccccccccccccccccCc
Confidence
Q ss_pred ------------------CCCCc--c-ccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcc
Q 019653 267 ------------------DEVPV--K-SVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASK 323 (337)
Q Consensus 267 ------------------~~~~v--~-~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~ 323 (337)
-+.++ . .+|...+++|.+++++.++...|++.+.+.++|+| .|..+|++|+.|.++
T Consensus 166 ~~~~~i~~~~~~~~~~~~l~~~Vdl~~~~md~sP~tv~~~tsL~~v~~LF~~lglr~l~V~~-~GrLVGIVTrkDl~k 242 (250)
T 2d4z_A 166 RFEEMLTLEEIYRWEQREKNVVVNFETCRIDQSPFQLVEGTSLQKTHTLFSLLGLDRAYVTS-MGKLVGVVALAEIQA 242 (250)
T ss_dssp -CCSCCBHHHHHHHHHHHTTCBCCTTSSCEECCSCCBCTTCBHHHHHHHHHHHTCSEEEEEE-TTEEEEEEEHHHHHH
T ss_pred ccccccChhhhhhHHHHhcCceeccccccccCCCeEECCCCcHHHHHHHHHHhCCeEEEEEE-CCEEEEEEEHHHHHH
Confidence 00011 1 23456677899999999999999999999999997 599999999987654
No 65
>2v8q_E 5'-AMP-activated protein kinase subunit gamma-1; phosphorylation, nucleotide-binding, serine/threonine-protei kinase, magnesium, CBS domain; HET: AMP; 2.10A {Rattus norvegicus} SCOP: d.37.1.1 d.37.1.1 PDB: 2v92_E* 2v9j_E* 2y8l_E* 2y8q_E* 2y94_E* 2ya3_E*
Probab=99.24 E-value=3.5e-12 Score=119.37 Aligned_cols=118 Identities=14% Similarity=0.177 Sum_probs=99.8
Q ss_pred cccccc--cccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCC-----CCCccccc-
Q 019653 204 KTASDA--MTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPED-----EVPVKSVT- 275 (337)
Q Consensus 204 ~~V~dI--Mtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~-----~~~v~~i~- 275 (337)
.+++++ |+ ..++.++++++++. ++.+.|.+++++++||+|++ ++++|+|+.+|+++....+ +.++.++|
T Consensus 190 ~~v~~~~v~~-~~~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-~~l~Giit~~dl~~~~~~~~~~~~~~~v~~~~~ 266 (330)
T 2v8q_E 190 KSLEELQIGT-YANIAMVRTTTPVY-VALGIFVQHRVSALPVVDEK-GRVVDIYSKFDVINLAAEKTYNNLDVSVTKALQ 266 (330)
T ss_dssp SBHHHHTCSB-CSSCCCEETTCBHH-HHHHHHHHHCCSEEEEECTT-SBEEEEEEGGGTGGGGGSSCCCCCSSBHHHHGG
T ss_pred CCHHHhcccC-cCCceEECCCCCHH-HHHHHHHHcCCCeEEEECCC-CcEEEEEEHHHHHHHHhccccccccCcHHHHHh
Confidence 456665 43 24778899999998 99999999999999999875 8999999999999754321 34677775
Q ss_pred -----cccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 276 -----IRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 276 -----~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
.+++.++++++++.++++.|.+++.+.++|+|++|...|+++.+|.++.
T Consensus 267 ~~~~~~~~~~~v~~~~~l~~a~~~m~~~~~~~l~Vvd~~g~l~Giit~~Dil~~ 320 (330)
T 2v8q_E 267 HRSHYFEGVLKCYLHETLEAIINRLVEAEVHRLVVVDEHDVVKGIVSLSDILQA 320 (330)
T ss_dssp GCCSCCCSCCEECTTSBHHHHHHHHHHHTCSEEEEECTTSBEEEEEEHHHHHHH
T ss_pred ccccccCCCeEECCCCcHHHHHHHHHHCCCcEEEEEcCCCcEEEEEeHHHHHHH
Confidence 3789999999999999999999999999999999999999999876553
No 66
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=99.22 E-value=1.6e-12 Score=129.20 Aligned_cols=126 Identities=12% Similarity=0.145 Sum_probs=9.0
Q ss_pred HHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCC
Q 019653 191 ETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVP 270 (337)
Q Consensus 191 E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~ 270 (337)
.++.+.++. +++++|++ +++++++++++. ++++.|.+++++.+||+|++ ++++|+|+.+|++... ..+.+
T Consensus 87 ~~~~v~~v~-----~~~~iM~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~-~~lvGivt~~Dl~~~~-~~~~~ 156 (494)
T 1vrd_A 87 QARQVSIVK-----KTENGIIY--DPITVTPDMTVK-EAIDLMAEYKIGGLPVVDEE-GRLVGLLTNRDVRFEK-NLSKK 156 (494)
T ss_dssp HHHHHHHHH-----TC----------------------------------------------------------------
T ss_pred HHHHHHhhh-----hHhhcCcc--CCeEECCCCCHH-HHHHHHHHcCceEEEEEcCC-CEEEEEEEHHHHHhhc-CCCCc
Confidence 344555554 46789986 788999999998 99999999999999999875 7999999999998632 23567
Q ss_pred ccccccc--cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccC
Q 019653 271 VKSVTIR--RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAY 326 (337)
Q Consensus 271 v~~i~~~--~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~ 326 (337)
+.++|.+ ++.++++++++.++++.|.+++.+.++|+|++|...|+++++|.++...
T Consensus 157 v~~im~~~~~~~~v~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~~ 214 (494)
T 1vrd_A 157 IKDLMTPREKLIVAPPDISLEKAKEILHQHRIEKLPLVSKDNKLVGLITIKDIMSVIE 214 (494)
T ss_dssp ----------------------------------------------------CHHHHT
T ss_pred HHHHhCCCCCCeEECCCCCHHHHHHHHHHcCCcEEEEEcCCCeEEEEEEHHHHHhhhc
Confidence 8999876 8999999999999999999999999999999999999999998876543
No 67
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=99.14 E-value=5e-12 Score=126.23 Aligned_cols=118 Identities=10% Similarity=0.209 Sum_probs=69.6
Q ss_pred ccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCC--CCcEeEEeEhhhhhhcCC-CCCCCccccccc--cC
Q 019653 205 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLILVKNLLTIHP-EDEVPVKSVTIR--RI 279 (337)
Q Consensus 205 ~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~--~~~ivGiv~~kDll~~~~-~~~~~v~~i~~~--~~ 279 (337)
+++++|++ +++++++++++. ++++.|.+++++++||+|++ .++++|+|+.+|+..... ..+.++.++|.+ ++
T Consensus 109 ~~~~im~~--~~~~v~~~~tv~-ea~~~m~~~~~~~~pVvd~~~~~~~lvGiVt~~Dl~~~~~~~~~~~v~~vm~~~~~~ 185 (514)
T 1jcn_A 109 NFEQGFIT--DPVVLSPSHTVG-DVLEAKMRHGFSGIPITETGTMGSKLVGIVTSRDIDFLAEKDHTTLLSEVMTPRIEL 185 (514)
T ss_dssp TCCTTSCS--SCCCCCC------------------CEESCC--------CCEECTTTTC----------------CCBCC
T ss_pred hhhhcccc--CCEEECCCCCHH-HHHHHHHhcCCCEEEEEeCCCcCCEEEEEEEHHHHHhhhhccCCCCHHHHhCCCCCC
Confidence 68899985 577899999998 99999999999999999863 379999999999986421 234678999877 89
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcccc
Q 019653 280 PRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSA 325 (337)
Q Consensus 280 ~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~ 325 (337)
.++++++++.++++.|.+++.+.++|+|++|...|++|+.|.++..
T Consensus 186 ~tv~~~~~l~ea~~~m~~~~~~~lpVVd~~g~lvGiIt~~Dll~~~ 231 (514)
T 1jcn_A 186 VVAPAGVTLKEANEILQRSKKGKLPIVNDCDELVAIIARTDLKKNR 231 (514)
T ss_dssp CCEETTCCSTTTTTHHHHHTCSCCCEESSSSCCC----CCCCSSCC
T ss_pred eEECCCCCHHHHHHHHHHcCCCcccEECCCCeEEEEEEHHHHHHHh
Confidence 9999999999999999999999999999999999999999887654
No 68
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=99.06 E-value=2.7e-11 Score=118.94 Aligned_cols=126 Identities=11% Similarity=0.225 Sum_probs=9.8
Q ss_pred HHHHHHHHhhhcccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCC--CCcEeEEeEhhhhhhcCCC
Q 019653 189 HDETTIIAGALELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE--PTNIIGLILVKNLLTIHPE 266 (337)
Q Consensus 189 ~~E~~~l~~~l~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~--~~~ivGiv~~kDll~~~~~ 266 (337)
+++.+++..+-++.. .|+ .+.+++.++.++. ++++++.+++++.+||+++. .++++|+|+-+|+... +
T Consensus 128 e~Qa~~V~~VKr~e~-----g~i--~dPvtl~P~~Tv~-da~~l~~~~~isgvpVvd~g~~~~kLvGIvT~RD~rf~--d 197 (556)
T 4af0_A 128 EEQAAMVRRVKKYEN-----GFI--TDPLCLGPDATVG-DVLEIKAKFGFCGVPITETGEPDSKLLGIVTGRDVQFQ--D 197 (556)
T ss_dssp HHHHHHHHHHHHCCC-----------------------------------------------------------------
T ss_pred HHHHHHHHHHHhccc-----Ccc--CCCeEcCCCCCHH-HHHHHHHHhCCCccccccccCcCCEEEEEEeccccccc--c
Confidence 455677777766654 343 2577899999998 99999999999999999852 3789999999998652 3
Q ss_pred CCCCccccccccCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccc
Q 019653 267 DEVPVKSVTIRRIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKS 324 (337)
Q Consensus 267 ~~~~v~~i~~~~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~ 324 (337)
.+.+++++|.+++.+++++.++.++.+.|++++...++|||++|...|++|+.|..++
T Consensus 198 ~~~~V~evMT~~lvt~~~~~~leeA~~iL~~~kieklpVVd~~g~LvGlIT~kDi~k~ 255 (556)
T 4af0_A 198 AETPIKSVMTTEVVTGSSPITLEKANSLLRETKKGKLPIVDSNGHLVSLVARSDLLKN 255 (556)
T ss_dssp ----------------------------------------------------------
T ss_pred cceEhhhhcccceEEecCCCCHHHHHHHHHHccccceeEEccCCcEEEEEEechhhhh
Confidence 4578999998899999999999999999999999999999999999999999887553
No 69
>1vr9_A CBS domain protein/ACT domain protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; HET: MSE; 1.70A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.75 E-value=1.1e-09 Score=96.47 Aligned_cols=103 Identities=15% Similarity=0.202 Sum_probs=52.1
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccCc-ee
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP-RV 282 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~~-~V 282 (337)
.+|+++|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++..... ....+.+.+-.. ..
T Consensus 72 ~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGiit~~Dil~~~~~~-~~~~~~~~~l~~~~~ 146 (213)
T 1vr9_A 72 SSVFNKVSL--PDFFVHEEDNIT-HALLLFLEHQEPYLPVVDEE-MRLKGAVSLHDFLEALIEA-LAMDVPGIRFSVLLE 146 (213)
T ss_dssp SBSGGGCBC--TTCCEETTSBHH-HHHHHHHHCCCSEEEEECTT-CBEEEEEEHHHHHHHHHHS-CC-------------
T ss_pred CcHHHHccC--CCEEECCCCcHH-HHHHHHHHhCCCEEEEEcCC-CEEEEEEEHHHHHHHHHHH-hcCCCCcEEEEEEeC
Confidence 469999997 677899999998 99999999999999999876 8999999999999743211 111222211111 11
Q ss_pred CCCCCHHHHHHHHhhCCCeEEEEEecCCC
Q 019653 283 PETLPLYEILNEFQKGHSHMAVVVRQYNK 311 (337)
Q Consensus 283 ~~~~~l~~~l~~m~~~~~~~aiVvDe~G~ 311 (337)
....++.++.+.|.+++.+.++|++.+|.
T Consensus 147 ~~~~~l~~~~~~l~~~~~~~l~V~~~~~~ 175 (213)
T 1vr9_A 147 DKPGELRKVVDALALSNINILSVITTRSG 175 (213)
T ss_dssp -----------------------------
T ss_pred CCCccHHHHHHHHHHCCCcEEEEEEEecC
Confidence 33445999999999999999988876654
No 70
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=98.68 E-value=3.8e-08 Score=71.32 Aligned_cols=64 Identities=13% Similarity=0.296 Sum_probs=53.3
Q ss_pred EEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc-CCC----CCCCccccccccCcee
Q 019653 216 TFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI-HPE----DEVPVKSVTIRRIPRV 282 (337)
Q Consensus 216 v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~-~~~----~~~~v~~i~~~~~~~V 282 (337)
++++++++++. ++++.|.+++++.+||.|+ ++++|+++.+|+++. ... .+.+++++|.+++.+|
T Consensus 2 ~vtv~p~~tv~-ea~~~M~~~~i~~~~V~d~--~~lvGIvT~~Di~~~~~~~~~~~~~~~V~~iMt~~~iTV 70 (70)
T 3ghd_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVKI 70 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTCC
T ss_pred CEEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHhcCCCcccCCHHHhcCCCCeEC
Confidence 67899999998 9999999999999999974 789999999999753 221 2457899988887654
No 71
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=98.64 E-value=6.6e-08 Score=69.10 Aligned_cols=63 Identities=13% Similarity=0.267 Sum_probs=52.4
Q ss_pred EEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCC-----CCCCccccccccCce
Q 019653 216 TFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPE-----DEVPVKSVTIRRIPR 281 (337)
Q Consensus 216 v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~-----~~~~v~~i~~~~~~~ 281 (337)
+.++++++++. ++++.|.+++++++||+|+ ++++|+++.+|+++.... .+.+++++|.+++.+
T Consensus 2 ~~~v~~~~~~~-~a~~~m~~~~~~~~pV~d~--~~l~Givt~~dl~~~~~~~~~~~~~~~v~~im~~~~~~ 69 (70)
T 3fio_A 2 AIVVQPKDTVD-RVAKILSRNKAGSAVVMEG--DEILGVVTERDILDKVVAKGKNPKEVKVEEIMTKNPVK 69 (70)
T ss_dssp EEEECTTCBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHHHHTTTTTCCGGGCBGGGTCEECTTC
T ss_pred CeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHHHcCCCcccCCHHHhcCCCCeE
Confidence 56889999998 9999999999999999986 799999999999975321 245788987666654
No 72
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=98.44 E-value=8.8e-08 Score=85.73 Aligned_cols=60 Identities=20% Similarity=0.278 Sum_probs=50.1
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
...+++++|+| +++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++..
T Consensus 183 ~~~~v~~im~~-~~~~~~~~~~~~~-~~~~~m~~~~~~~~pVvd~~-~~~~Giit~~dll~~~ 242 (245)
T 3l2b_A 183 QSLPVDYVMTK-DNLVAVSTDDLVE-DVKVTMSETRYSNYPVIDEN-NKVVGSIARFHLISTH 242 (245)
T ss_dssp GGSBHHHHSBC-TTCCCEETTSBHH-HHHHHHHHHCCSEEEEECTT-CBEEEEEECC------
T ss_pred cCCceeeEecC-CccEEECCCCcHH-HHHHHHHhcCCceEEEEcCC-CeEEEEEEHHHhhchh
Confidence 46789999998 6889999999998 99999999999999999876 8999999999998753
No 73
>4esy_A CBS domain containing membrane protein; structural genomics, PSI-biology; 2.01A {Sphaerobacter thermophilus}
Probab=98.31 E-value=3.7e-07 Score=76.93 Aligned_cols=60 Identities=20% Similarity=0.292 Sum_probs=53.6
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (337)
..+.+|+++|++ ++.++++++++. ++++.|.+++..++||+|+ |+++|+|+.+|+++...
T Consensus 102 ~~~~~v~~im~~--~~~tv~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGivt~~Dil~~l~ 161 (170)
T 4esy_A 102 GRKLTASAVMTQ--PVVTAAPEDSVG-SIADQMRRHGIHRIPVVQD--GVPVGIVTRRDLLKLLL 161 (170)
T ss_dssp HTTCBHHHHCBC--CSCCBCTTSBHH-HHHHHHHHTTCSEEEEEET--TEEEEEEEHHHHTTTSC
T ss_pred ccccchhhhccc--CcccCCcchhHH-HHHHHHHHcCCcEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 456789999986 778999999998 9999999999999999984 79999999999998654
No 74
>4fry_A Putative signal-transduction protein with CBS DOM; CBS domain,ssgcid, structural genomics, niaid; HET: NAD AMP; 2.10A {Burkholderia ambifaria}
Probab=98.30 E-value=5.1e-07 Score=74.76 Aligned_cols=59 Identities=24% Similarity=0.332 Sum_probs=53.1
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+| + ++++|+|+.+|+++..
T Consensus 75 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dil~~l 133 (157)
T 4fry_A 75 SKATRVEEIMTA--KVRYVEPSQSTD-ECMALMTEHRMRHLPVLD-G-GKLIGLISIGDLVKSV 133 (157)
T ss_dssp SSSCBHHHHSBS--SCCCBCTTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccccCHHHHcCC--CCcEECCCCcHH-HHHHHHHHcCCCEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 457899999986 677899999998 999999999999999998 4 8999999999999854
No 75
>3fv6_A YQZB protein; CBS domain dimer, metabolism regulator, central glycolytic G regulator, transcription; 1.95A {Bacillus subtilis} PDB: 3fwr_A* 3fws_A*
Probab=98.24 E-value=1e-06 Score=73.23 Aligned_cols=62 Identities=21% Similarity=0.280 Sum_probs=55.6
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCC---cEeEEeEhhhhhhc
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPT---NIIGLILVKNLLTI 263 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~---~ivGiv~~kDll~~ 263 (337)
...+.+++++|+++.++.++++++++. ++++.|.+++++++||+|++ + +++|+|+.+|+++.
T Consensus 77 ~~~~~~v~~~m~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~~~vGiit~~dil~~ 141 (159)
T 3fv6_A 77 ELTSVPVHIIMTRMPNITVCRREDYVM-DIAKHLIEKQIDALPVIKDT-DKGFEVIGRVTKTNMTKI 141 (159)
T ss_dssp CTTTCBGGGTSEETTSCCCBCTTSBHH-HHHHHHHHHTCSEEEEEEEC-SSSEEEEEEEEHHHHHHH
T ss_pred cccCcCHHHHHcCCCCcEEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CcceeEEEEEEHHHHHHH
Confidence 346779999999877888999999998 99999999999999999875 5 89999999999874
No 76
>3kpb_A Uncharacterized protein MJ0100; CBS domain, S-adenosylmethionine, conformational change, unknown function; HET: SAM; 1.60A {Methanocaldococcus jannaschii} SCOP: d.37.1.0 PDB: 3kpd_A* 3kpc_A*
Probab=98.23 E-value=1.4e-06 Score=68.58 Aligned_cols=59 Identities=17% Similarity=0.291 Sum_probs=52.2
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
...+++++|.+ ++.++++++++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++..
T Consensus 60 ~~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Givt~~dl~~~l 118 (122)
T 3kpb_A 60 NKKTIEEIMTR--NVITAHEDEPVD-HVAIKMSKYNISGVPVVDDY-RRVVGIVTSEDISRLF 118 (122)
T ss_dssp TCCBGGGTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred cccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCeEEEECCC-CCEEEEEeHHHHHHHh
Confidence 34489999986 677899999998 99999999999999999876 8999999999998754
No 77
>3usb_A Inosine-5'-monophosphate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, CBS-domain; HET: MSE IMP; 2.38A {Bacillus anthracis} PDB: 3tsd_A* 3tsb_A*
Probab=98.16 E-value=2.2e-06 Score=85.18 Aligned_cols=130 Identities=15% Similarity=0.136 Sum_probs=92.6
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccC
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRI 279 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~ 279 (337)
.-.+.+++++|++ .+++++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..... ....+.+.+..
T Consensus 171 ~~~~~~V~~vM~~-~~~vtv~~~~~l~-eal~~m~~~~i~~lpVVDe~-g~l~GiIT~~Dil~~~~~p-~a~~D~~~rl~ 246 (511)
T 3usb_A 171 QDYSIKISDVMTK-EQLITAPVGTTLS-EAEKILQKYKIEKLPLVDNN-GVLQGLITIKDIEKVIEFP-NSAKDKQGRLL 246 (511)
T ss_dssp CCSSSBHHHHCCC-CCCCCEETTCCHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHHHCT-TCCBCTTSCBC
T ss_pred ccCCCcHHHhccc-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEeCC-CCEeeeccHHHHHHhhhcc-cchhhhcccee
Confidence 3356789999996 5788999999998 99999999999999999986 8999999999999754321 12233322222
Q ss_pred c--eeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCccccCCCCceee
Q 019653 280 P--RVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSAYGRSPLIC 333 (337)
Q Consensus 280 ~--~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~~~~~~~~~ 333 (337)
. .+..+....+.++.+.+.+.+.+.|-..+|...+....-..++..++..|++.
T Consensus 247 V~aavg~~~d~~era~aLveaGvd~I~Id~a~g~~~~v~~~i~~i~~~~~~~~vi~ 302 (511)
T 3usb_A 247 VGAAVGVTADAMTRIDALVKASVDAIVLDTAHGHSQGVIDKVKEVRAKYPSLNIIA 302 (511)
T ss_dssp CEEEECSSTTHHHHHHHHHHTTCSEEEEECSCTTSHHHHHHHHHHHHHCTTSEEEE
T ss_pred eeeeeeeccchHHHHHHHHhhccceEEecccccchhhhhhHHHHHHHhCCCceEEe
Confidence 2 34444455777888889999977666555555555444444555566666664
No 78
>1pbj_A Hypothetical protein; structural genomics, domain, PSI, protein structure initiative; 1.40A {Methanothermobacter thermautotrophicusdelta H} SCOP: d.37.1.1
Probab=98.15 E-value=1.6e-06 Score=68.52 Aligned_cols=60 Identities=22% Similarity=0.298 Sum_probs=53.3
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
...+.+++++|++ ++.++++++++. ++++.|.+++++++||+|+ ++++|+++.+|+++..
T Consensus 61 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~--~~~~Gvit~~dl~~~l 120 (125)
T 1pbj_A 61 DLAEVKVWEVMER--DLVTISPRATIK-EAAEKMVKNVVWRLLVEED--DEIIGVISATDILRAK 120 (125)
T ss_dssp CTTTSBHHHHCBC--GGGEECTTSCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred cccccCHHHHcCC--CCeEECCCCCHH-HHHHHHHhcCCcEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 3467889999986 677899999998 9999999999999999986 7999999999998754
No 79
>2ef7_A Hypothetical protein ST2348; CBS-domain, structural genomics, NPPSFA, national project on structural and functional analyses; 2.10A {Sulfolobus tokodaii} SCOP: d.37.1.1
Probab=98.15 E-value=2.3e-06 Score=68.49 Aligned_cols=58 Identities=19% Similarity=0.326 Sum_probs=52.0
Q ss_pred ccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 203 ~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
+.+++++|++ ++.++++++++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++..
T Consensus 66 ~~~v~~~~~~--~~~~v~~~~~l~-~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~~ 123 (133)
T 2ef7_A 66 ETKAEEFMTA--SLITIREDSPIT-GALALMRQFNIRHLPVVDDK-GNLKGIISIRDITRAI 123 (133)
T ss_dssp TCBGGGTSEE--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred ccCHHHHcCC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHHH
Confidence 5789999986 677899999998 99999999999999999876 8999999999998753
No 80
>1pvm_A Conserved hypothetical protein TA0289; structural genomics, CBS domain, PSI, protein structure initiative; 1.50A {Thermoplasma acidophilum dsm 1728} SCOP: d.37.1.1 g.41.13.1 PDB: 2qh1_A
Probab=98.13 E-value=4.9e-06 Score=70.90 Aligned_cols=60 Identities=13% Similarity=0.211 Sum_probs=53.7
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|.+ ++.++++++++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++..
T Consensus 72 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Givt~~dll~~~ 131 (184)
T 1pvm_A 72 PDEVPIRLVMRK--PIPKVKSDYDVK-DVAAYLSENGLERCAVVDDP-GRVVGIVTLTDLSRYL 131 (184)
T ss_dssp GGGSBGGGTSBS--SCCEEETTCBHH-HHHHHHHHHTCSEEEEECTT-CCEEEEEEHHHHTTTS
T ss_pred cccCCHHHHhCC--CCcEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 467789999986 677899999998 99999999999999999876 8999999999999754
No 81
>4gqw_A CBS domain-containing protein CBSX1, chloroplasti; thioredoxin, plant, protein binding; 2.20A {Arabidopsis thaliana}
Probab=98.13 E-value=1.7e-06 Score=70.63 Aligned_cols=61 Identities=23% Similarity=0.450 Sum_probs=52.3
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
...+.+++++|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++..
T Consensus 81 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dil~~~ 141 (152)
T 4gqw_A 81 KTNGKLVGDLMTP--APLVVEEKTNLE-DAAKILLETKYRRLPVVDSD-GKLVGIITRGNVVRAA 141 (152)
T ss_dssp ---CCBHHHHSEE--SCCCEESSSBHH-HHHHHHHHSSCCEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred HhccccHHHhcCC--CceEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CcEEEEEEHHHHHHHH
Confidence 3456789999987 567899999998 99999999999999999876 8999999999999753
No 82
>2rc3_A CBS domain; in SITU proteolysis, BR, structural genomics, PSI-2, protein structure initiative; HET: NAD; 1.60A {Nitrosomonas europaea atcc 19718} SCOP: d.37.1.1
Probab=98.13 E-value=3.3e-06 Score=67.88 Aligned_cols=59 Identities=24% Similarity=0.406 Sum_probs=52.9
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||+| + ++++|+|+.+|+++..
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~~~Giit~~dll~~~ 129 (135)
T 2rc3_A 71 VKDTQVKEIMTR--QVAYVDLNNTNE-DCMALITEMRVRHLPVLD-D-GKVIGLLSIGDLVKDA 129 (135)
T ss_dssp GGGSBGGGTSBC--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHhccC--CCeEECCCCcHH-HHHHHHHHhCCCEEEEEe-C-CEEEEEEEHHHHHHHH
Confidence 467899999986 677899999998 999999999999999998 5 8999999999998753
No 83
>3lhh_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG, cell membrane; HET: MSE AMP; 2.10A {Shewanella oneidensis}
Probab=98.12 E-value=6.7e-06 Score=69.36 Aligned_cols=58 Identities=16% Similarity=0.135 Sum_probs=51.7
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
.+.+++++| + ++.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..
T Consensus 105 ~~~~v~~im-~--~~~~v~~~~~l~-~a~~~m~~~~~~~~pVvd~~-g~lvGiit~~Dil~~l 162 (172)
T 3lhh_A 105 ERLELVDLV-K--NCNFVPNSLSGM-ELLEHFRTTGSQMVFVVDEY-GDLKGLVTLQDMMDAL 162 (172)
T ss_dssp CCCCGGGGC-B--CCEEEETTCCHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred CcccHHHHh-c--CCeEeCCCCCHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 367899999 3 578899999998 99999999999999999876 8999999999999753
No 84
>3lfr_A Putative metal ION transporter; CBS, AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 1.53A {Pseudomonas syringae}
Probab=98.12 E-value=3.2e-06 Score=68.39 Aligned_cols=59 Identities=14% Similarity=0.180 Sum_probs=52.5
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|+| +.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..
T Consensus 67 ~~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~l 125 (136)
T 3lfr_A 67 GDSDDVKKLLRP---ATFVPESKRLN-VLLREFRANHNHMAIVIDEY-GGVAGLVTIEDVLEQI 125 (136)
T ss_dssp GGGCCGGGTCBC---CCEEETTCBHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHTTC
T ss_pred CCCcCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 356789999975 67899999998 99999999999999999876 8999999999999754
No 85
>1me8_A Inosine-5'-monophosphate dehydrogenase; alpha beta barrel, oxidoreductase; HET: RVP; 1.90A {Tritrichomonas foetus} SCOP: c.1.5.1 PDB: 1ak5_A* 1me7_A* 1me9_A* 1meh_A* 1mei_A* 1mew_A* 1pvn_A* 1lrt_A*
Probab=98.12 E-value=3.1e-07 Score=91.24 Aligned_cols=126 Identities=15% Similarity=0.150 Sum_probs=30.0
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCcccccc--ccC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTI--RRI 279 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~--~~~ 279 (337)
.+.+|+++|+|.+++.++++++++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++...... ...+.+. ...
T Consensus 159 ~~~~V~diM~~~~~~~tv~~~~sl~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~~~-~~~d~~~~l~v~ 235 (503)
T 1me8_A 159 TETKVSDMMTPFSKLVTAHQDTKLS-EANKIIWEKKLNALPIIDDD-QHLRYIVFRKDYDRSQVCHN-ELVDSQKRYLVG 235 (503)
T ss_dssp -----------------------------------------------------------------CC-CCBCTTSCBCCE
T ss_pred ccCcHHHHhCCCCCCEEEcCCCcHH-HHHHHHHHcCCCEEEEEcCC-CeEEEEEEecHHHHhhhccc-chhccccccccc
Confidence 4568999999876799999999998 99999999999999999976 89999999999997543221 1122111 111
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEecC-CCCCCCCCCCCCccccCCC-Ccee
Q 019653 280 PRVPETLPLYEILNEFQKGHSHMAVVVRQY-NKNAEQPASNPASKSAYGR-SPLI 332 (337)
Q Consensus 280 ~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~-G~~~~~~~~~~~~~~~~~~-~~~~ 332 (337)
..++. ....+.++.|.+.+.+.. ++|.. |...+.++.-+.++..+.+ -|++
T Consensus 236 a~v~~-~~~~e~~~~l~e~gv~~l-~Vd~~~g~~~~~~~~i~~lk~~~~~~~~Vi 288 (503)
T 1me8_A 236 AGINT-RDFRERVPALVEAGADVL-CIDSSDGFSEWQKITIGWIREKYGDKVKVG 288 (503)
T ss_dssp EEECS-SSHHHHHHHHHHHTCSEE-EECCSCCCSHHHHHHHHHHHHHHGGGSCEE
T ss_pred cccCc-hhHHHHHHHHHhhhccce-EEecccCcccchhhHHHHHHHhCCCCceEe
Confidence 23445 566777888888888865 55443 4343333333444444433 4544
No 86
>3jtf_A Magnesium and cobalt efflux protein; CBS domain, CORC, AMP, structural genomics, PSI-2, protein S initiative; HET: MSE AMP; 2.00A {Bordetella parapertussis}
Probab=98.11 E-value=4.2e-06 Score=66.97 Aligned_cols=57 Identities=18% Similarity=0.200 Sum_probs=50.5
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
.+.+++++|.| +.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++.
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~pVvd~~-g~~~Giit~~Dil~~ 123 (129)
T 3jtf_A 67 PALDIRSLVRP---AVFIPEVKRLN-VLLREFRASRNHLAIVIDEH-GGISGLVTMEDVLEQ 123 (129)
T ss_dssp TTSCGGGGCBC---CCEEETTCBHH-HHHHHHHTSSCCEEEEECC--CCEEEEEEHHHHHHH
T ss_pred CCcCHHHHhCC---CeEeCCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHH
Confidence 56789999964 67899999998 99999999999999999876 899999999999874
No 87
>3lv9_A Putative transporter; CBS domain, PSI, MCSG, structural genomics, protein structur initiative, midwest center for structural genomics; 2.40A {Clostridium difficile 630}
Probab=98.10 E-value=5.9e-06 Score=67.58 Aligned_cols=56 Identities=14% Similarity=0.190 Sum_probs=50.8
Q ss_pred ccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 203 EKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 203 ~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
+.+++++|. ++.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++.
T Consensus 87 ~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dil~~ 142 (148)
T 3lv9_A 87 KIELEEILR---DIIYISENLTID-KALERIRKEKLQLAIVVDEY-GGTSGVVTIEDILEE 142 (148)
T ss_dssp CCCGGGTCB---CCEEEETTSBHH-HHHHHHHHHTCSEEEEECTT-SSEEEEEEHHHHHHH
T ss_pred CccHHHhcC---CCeEECCCCCHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHH
Confidence 778999993 577899999998 99999999999999999876 899999999999874
No 88
>3oco_A Hemolysin-like protein containing CBS domains; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.20A {Oenococcus oeni}
Probab=98.08 E-value=6.1e-06 Score=68.04 Aligned_cols=58 Identities=17% Similarity=0.150 Sum_probs=51.9
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
.+.+++++| + ++.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..
T Consensus 84 ~~~~v~~~m-~--~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd~~-g~~vGivt~~dil~~l 141 (153)
T 3oco_A 84 DKAKISTIM-R--DIVSVPENMKVP-DVMEEMSAHRVPMAIVIDEY-GGTSGIITDKDVYEEL 141 (153)
T ss_dssp TTSBGGGTC-B--CCEEEETTSBHH-HHHHHHHHTTCSCEEEECTT-SCEEEEECHHHHHHHH
T ss_pred CCCcHHHHh-C--CCeEECCCCCHH-HHHHHHHHcCCcEEEEEeCC-CCEEEEeeHHHHHHHH
Confidence 367899999 3 678899999998 99999999999999999876 8999999999999753
No 89
>1o50_A CBS domain-containing predicted protein TM0935; CBS-domain PAIR fold, structural genomics, joint center for structural genomics, JCSG; 1.87A {Thermotoga maritima} SCOP: d.37.1.1
Probab=98.08 E-value=3.4e-06 Score=69.86 Aligned_cols=60 Identities=23% Similarity=0.391 Sum_probs=53.1
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
...+.+++++|++ +.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++..
T Consensus 92 ~~~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dll~~l 151 (157)
T 1o50_A 92 RLIAKNASEIMLD---PVYVHMDTPLE-EALKLMIDNNIQEMPVVDEK-GEIVGDLNSLEILLAL 151 (157)
T ss_dssp CCSSCBHHHHCBC---CCCBCTTSBHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHHHH
T ss_pred HHcCCcHHHHcCC---CeEECCCCCHH-HHHHHHHHCCCcEEEEEcCC-CEEEEEEEHHHHHHHH
Confidence 3467889999986 67899999998 99999999999999999865 8999999999998753
No 90
>3nqr_A Magnesium and cobalt efflux protein CORC; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics; HET: AMP; 2.00A {Salmonella typhimurium}
Probab=98.07 E-value=3.9e-06 Score=66.93 Aligned_cols=58 Identities=10% Similarity=0.201 Sum_probs=51.3
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
.+.+++++|.| ..++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..
T Consensus 67 ~~~~v~~~m~~---~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (127)
T 3nqr_A 67 EAFSMDKVLRT---AVVVPESKRVD-RMLKEFRSQRYHMAIVIDEF-GGVSGLVTIEDILELI 124 (127)
T ss_dssp CCCCHHHHCBC---CCEEETTCBHH-HHHHHHHHTTCCEEEEECTT-SCEEEEEEHHHHHHHC
T ss_pred CCCCHHHHcCC---CeEECCCCcHH-HHHHHHHhcCCeEEEEEeCC-CCEEEEEEHHHHHHHH
Confidence 56789999965 46799999998 99999999999999999876 8999999999998753
No 91
>2nyc_A Nuclear protein SNF4; bateman2 domain, AMP kinase, protein binding; 1.90A {Saccharomyces cerevisiae} SCOP: d.37.1.1 PDB: 2nye_A
Probab=98.07 E-value=4.8e-06 Score=67.31 Aligned_cols=61 Identities=16% Similarity=0.248 Sum_probs=51.9
Q ss_pred ccccccccccccCc----eEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 201 LTEKTASDAMTPIA----ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 201 l~~~~V~dIMtpr~----~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
..+.+++++|++.. ++.++++++++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++.
T Consensus 74 ~~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dil~~ 138 (144)
T 2nyc_A 74 DLSLSVGEALMRRSDDFEGVYTCTKNDKLS-TIMDNIRKARVHRFFVVDDV-GRLVGVLTLSDILKY 138 (144)
T ss_dssp -CCSBHHHHHHHCC------CEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHH
T ss_pred cCCccHHHHHhcCccccCCCeEECCCCcHH-HHHHHHHHCCCCEEEEECCC-CCEEEEEEHHHHHHH
Confidence 34678999998642 678999999998 99999999999999999876 899999999999874
No 92
>3sl7_A CBS domain-containing protein CBSX2; CBS-PAIR protein, redox regulator, plant CBS domain, thiored chloroplast, membrane protein; 1.91A {Arabidopsis thaliana}
Probab=98.05 E-value=2.5e-06 Score=71.80 Aligned_cols=60 Identities=25% Similarity=0.448 Sum_probs=53.4
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
...+.+++++|++ ++.++++++++. ++++.|.+++++++||+|++ ++++|+|+.+|+++.
T Consensus 94 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~ 153 (180)
T 3sl7_A 94 KTYGKVVGDLMTP--SPLVVRDSTNLE-DAARLLLETKFRRLPVVDAD-GKLIGILTRGNVVRA 153 (180)
T ss_dssp TTTTCBHHHHSEE--SCCCEETTSBHH-HHHHHHTTSTTCEEEEECTT-CBEEEEEEHHHHHHH
T ss_pred ccccccHHHHhCC--CceEeCCCCcHH-HHHHHHHHcCCCEEEEECCC-CeEEEEEEHHHHHHH
Confidence 4457789999986 567899999998 99999999999999999876 899999999999874
No 93
>3i8n_A Uncharacterized protein VP2912; APC64273.1, vibrio parahaemolyticus RIMD 2210633, structural genomics, PSI-2; 2.15A {Vibrio parahaemolyticus}
Probab=98.05 E-value=7e-06 Score=65.66 Aligned_cols=57 Identities=16% Similarity=0.263 Sum_probs=50.8
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
.+.+++++|.| +.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++.
T Consensus 70 ~~~~v~~~m~~---~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~~vGivt~~dil~~ 126 (130)
T 3i8n_A 70 GQKQLGAVMRP---IQVVLNNTALP-KVFDQMMTHRLQLALVVDEY-GTVLGLVTLEDIFEH 126 (130)
T ss_dssp TTSBHHHHSEE---CCEEETTSCHH-HHHHHHHHHTCCEEEEECTT-SCEEEEEEHHHHHHH
T ss_pred CcCCHHHHhcC---CcCcCCCCcHH-HHHHHHHHcCCeEEEEEcCC-CCEEEEEEHHHHHHH
Confidence 36789999953 67899999998 99999999999999999876 899999999999864
No 94
>3gby_A Uncharacterized protein CT1051; CBS domain, structural genomics, PSI-2, protein structure initiative; HET: EPE; 1.66A {Chlorobium tepidum tls}
Probab=98.05 E-value=3e-06 Score=67.64 Aligned_cols=57 Identities=14% Similarity=0.133 Sum_probs=51.1
Q ss_pred cccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 204 KTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 204 ~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
.+++++|++ ++.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..
T Consensus 68 ~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~lpVvd~~-g~~~Giit~~dll~~l 124 (128)
T 3gby_A 68 EKLGEELLE--TVRSYRPGEQLF-DNLISVAAAKCSVVPLADED-GRYEGVVSRKRILGFL 124 (128)
T ss_dssp CBCCGGGCB--CCCCBCTTSBGG-GSHHHHHHCSSSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CcHHHHccC--CCcEECCCCCHH-HHHHHHHhCCCcEEEEECCC-CCEEEEEEHHHHHHHH
Confidence 679999985 667899999998 99999999999999999876 8999999999998743
No 95
>3fhm_A Uncharacterized protein ATU1752; CBS domain, prokaryotic, bound nucleotide, AMP, NADH, struct genomics, PSI-2; HET: AMP NAI; 2.70A {Agrobacterium tumefaciens str}
Probab=98.04 E-value=6.3e-06 Score=68.84 Aligned_cols=61 Identities=21% Similarity=0.305 Sum_probs=54.1
Q ss_pred cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC
Q 019653 200 ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (337)
Q Consensus 200 ~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (337)
...+.+++++|++ ++.++++++++. ++++.|.+++++++||+|+ ++++|+|+.+|+++...
T Consensus 89 ~~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~~~Giit~~dil~~~~ 149 (165)
T 3fhm_A 89 ASLQQSVSVAMTK--NVVRCQHNSTTD-QLMEIMTGGRFRHVPVEEN--GRLAGIISIGDVVKARI 149 (165)
T ss_dssp GGGTSBGGGTSBS--SCCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHTT
T ss_pred ccccCCHHHHhcC--CCeEECCCCcHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHHH
Confidence 3467899999985 677899999998 9999999999999999986 89999999999998653
No 96
>2rih_A Conserved protein with 2 CBS domains; bateman domain, AMP binding protein, ligand-BIND protein; 2.10A {Pyrobaculum aerophilum} SCOP: d.37.1.1 PDB: 2rif_A
Probab=98.03 E-value=6e-06 Score=66.89 Aligned_cols=57 Identities=11% Similarity=0.163 Sum_probs=51.1
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
.+.+++++|++ ++.+++++ ++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++.
T Consensus 69 ~~~~v~~~m~~--~~~~v~~~-~l~-~a~~~m~~~~~~~l~Vvd~~-g~~~Giit~~dll~~ 125 (141)
T 2rih_A 69 LDGPAMPIANS--PITVLDTD-PVH-VAAEKMRRHNIRHVVVVNKN-GELVGVLSIRDLCFE 125 (141)
T ss_dssp TTSBSGGGCBC--CCEEETTS-BHH-HHHHHHHHHTCSEEEEECTT-SCEEEEEEHHHHHSC
T ss_pred CCCCHHHHcCC--CCeEEcCC-CHH-HHHHHHHHcCCeEEEEEcCC-CcEEEEEEHHHHHHH
Confidence 36789999986 67889999 998 99999999999999999865 899999999999864
No 97
>2uv4_A 5'-AMP-activated protein kinase subunit gamma-1; transferase, CBS domain, lipid synthesis, fatty acid biosynthesis; HET: AMP; 1.33A {Homo sapiens} PDB: 2uv5_A* 2uv6_A* 2uv7_A*
Probab=98.02 E-value=4.8e-06 Score=68.51 Aligned_cols=60 Identities=15% Similarity=0.292 Sum_probs=52.4
Q ss_pred cccccccccccC----ceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 202 TEKTASDAMTPI----AETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 202 ~~~~V~dIMtpr----~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
.+.+++++|.++ .++.++++++++. ++++.|.+++.+++||+|++ ++++|+|+.+|+++.
T Consensus 85 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~~vGiit~~dil~~ 148 (152)
T 2uv4_A 85 LDVSVTKALQHRSHYFEGVLKCYLHETLE-TIINRLVEAEVHRLVVVDEN-DVVKGIVSLSDILQA 148 (152)
T ss_dssp TTSBGGGGGGTCCHHHHTCSEECTTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHH
T ss_pred hcchHHHHHhhhhcccCCCeEECCCCcHH-HHHHHHHHcCCeEEEEECCC-CeEEEEEEHHHHHHH
Confidence 356899999753 4677899999998 99999999999999999875 899999999999864
No 98
>1y5h_A Hypothetical protein RV2626C; CBS domain, unknown function; 1.50A {Mycobacterium tuberculosis} SCOP: d.37.1.1 PDB: 1xkf_A
Probab=98.01 E-value=4.3e-06 Score=66.87 Aligned_cols=59 Identities=24% Similarity=0.410 Sum_probs=52.7
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||+|+ ++++|+++.+|+++..
T Consensus 71 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l~Vvd~--g~~~Giit~~dil~~l 129 (133)
T 1y5h_A 71 PNTATAGELARD--SIYYVDANASIQ-EMLNVMEEHQVRRVPVISE--HRLVGIVTEADIARHL 129 (133)
T ss_dssp TTTSBHHHHHTT--CCCCEETTCCHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHTC
T ss_pred ccccCHHHHhcC--CCEEECCCCCHH-HHHHHHHHcCCCEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 356789999986 677899999998 9999999999999999986 7999999999999754
No 99
>3oi8_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADN; 1.99A {Neisseria meningitidis serogroup B}
Probab=98.00 E-value=5.4e-06 Score=68.71 Aligned_cols=56 Identities=14% Similarity=0.196 Sum_probs=50.2
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhh
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 262 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~ 262 (337)
.+.+++++|+| +.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++
T Consensus 101 ~~~~v~~im~~---~~~v~~~~~l~-~a~~~m~~~~~~~~~Vvd~~-g~~~Givt~~Dile 156 (156)
T 3oi8_A 101 EQFHLKSILRP---AVFVPEGKSLT-ALLKEFREQRNHMAIVIDEY-GGTSGLVTFEDIIE 156 (156)
T ss_dssp GGCCHHHHCBC---CCEEETTSBHH-HHHHHHHHTTCCEEEEECTT-SSEEEEEEHHHHCC
T ss_pred CcccHHHHcCC---CEEECCCCCHH-HHHHHHHhcCCeEEEEECCC-CCEEEEEEHHHhcC
Confidence 56789999975 67899999998 99999999999999999876 89999999999863
No 100
>3lqn_A CBS domain protein; csgid, structural genomics, unknown function, center for structural genomics of infectious diseases; 1.80A {Bacillus anthracis} SCOP: d.37.1.0
Probab=97.99 E-value=1e-05 Score=66.09 Aligned_cols=58 Identities=10% Similarity=0.276 Sum_probs=50.9
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.++++ +||+|++ ++++|+|+.+|+++..
T Consensus 84 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~~--l~Vvd~~-g~~~Giit~~dil~~l 141 (150)
T 3lqn_A 84 LEEMKVEQVMKQ--DIPVLKLEDSFA-KALEMTIDHPF--ICAVNED-GYFEGILTRRAILKLL 141 (150)
T ss_dssp GGGCBGGGTCBS--SCCEEETTCBHH-HHHHHHHHCSE--EEEECTT-CBEEEEEEHHHHHHHH
T ss_pred HhcCCHHHHhcC--CCceeCCCCCHH-HHHHHHHhCCE--EEEECCC-CcEEEEEEHHHHHHHH
Confidence 357789999985 677899999998 99999999987 9999876 8999999999999753
No 101
>3k2v_A Putative D-arabinose 5-phosphate isomerase; KPSF-like protein, CBS domain, structural genomics, PSI-2, P structure initiative; HET: MSE CMK; 1.95A {Klebsiella pneumoniae subsp} PDB: 3fna_A*
Probab=97.98 E-value=5.1e-06 Score=68.13 Aligned_cols=57 Identities=19% Similarity=0.314 Sum_probs=51.0
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhh
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLT 262 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~ 262 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++++++||+|++ +++|+|+.+|+++
T Consensus 92 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~--~~~Giit~~dil~ 148 (149)
T 3k2v_A 92 MRDASIADVMTR--GGIRIRPGTLAV-DALNLMQSRHITCVLVADGD--HLLGVVHMHDLLR 148 (149)
T ss_dssp CTTCBHHHHSEE--SCCEECTTCBHH-HHHHHHHHHTCSEEEEEETT--EEEEEEEHHHHTC
T ss_pred cccCcHHHHcCC--CCeEECCCCCHH-HHHHHHHHcCCCEEEEecCC--EEEEEEEHHHhhc
Confidence 467889999986 567899999998 99999999999999999864 9999999999975
No 102
>3hf7_A Uncharacterized CBS-domain protein; CSB-domain PAIR, AMP, PSI, MCSG, STR genomics, midwest center for structural genomics; HET: AMP; 2.75A {Klebsiella pneumoniae subsp}
Probab=97.97 E-value=8.6e-06 Score=65.34 Aligned_cols=57 Identities=19% Similarity=0.174 Sum_probs=50.1
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
...+++++|. ++.++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|+++.
T Consensus 68 ~~~~v~~~m~---~~~~v~~~~~l~-~~~~~m~~~~~~~~~Vvd~~-g~lvGiit~~Dil~~ 124 (130)
T 3hf7_A 68 TKEIMLRAAD---EIYFVPEGTPLS-TQLVKFQRNKKKVGLVVDEY-GDIQGLVTVEDILEE 124 (130)
T ss_dssp CHHHHHHHSB---CCCEEETTCBHH-HHHHHHHHHCCCEEEEECTT-SCEEEEEEHHHHHHH
T ss_pred chhhHHHhcc---CCeEeCCCCcHH-HHHHHHHhcCCeEEEEEcCC-CCEEEEeeHHHHHHH
Confidence 3467899994 467899999998 99999999999999999876 899999999999874
No 103
>3kxr_A Magnesium transporter, putative; cystathionine beta-synthase, Mg2+ transporter, structural GE PSI-2, protein structure initiative; 2.41A {Shewanella oneidensis mr-1}
Probab=97.96 E-value=7.9e-06 Score=71.38 Aligned_cols=60 Identities=13% Similarity=0.208 Sum_probs=53.4
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|++...
T Consensus 113 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVD~~-g~lvGiIT~~Dil~~i 172 (205)
T 3kxr_A 113 EPHEPLISLLSE--DSRALTANTTLL-DAAEAIEHSREIELPVIDDA-GELIGRVTLRAATALV 172 (205)
T ss_dssp CTTSBGGGGCCS--SCCCEETTSCHH-HHHHHHHTSSCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CCcchHHHHhcC--CCeEECCCCCHH-HHHHHHHhcCCCEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 356789999985 677899999998 99999999999999999876 8999999999998753
No 104
>2p9m_A Hypothetical protein MJ0922; structural genomics, collaboratory for structural genomics, secsg; 2.59A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID}
Probab=97.94 E-value=4.9e-06 Score=66.91 Aligned_cols=59 Identities=22% Similarity=0.354 Sum_probs=51.3
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcC-----CcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKG-----HSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~-----~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++ ++++||+|++ ++++|+++.+|+++.
T Consensus 70 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~~~~~~~~~~~~~~l~Vvd~~-g~~~Giit~~dll~~ 133 (138)
T 2p9m_A 70 TLETTIGDVMTK--DVITIHEDASIL-EAIKKMDISGKKEEIINQLPVVDKN-NKLVGIISDGDIIRT 133 (138)
T ss_dssp CSSCBHHHHSCS--SCCCEETTSBHH-HHHHHHTCC-----CCCEEEEECTT-SBEEEEEEHHHHHHH
T ss_pred cCCcCHHHHhCC--CcEEECCCCCHH-HHHHHHHhcCCccccccEEEEECCC-CeEEEEEEHHHHHHH
Confidence 356789999986 667899999998 9999999999 9999999865 899999999999864
No 105
>3k6e_A CBS domain protein; streptococcus pneumoniae TIGR4, structural genomics, PSI-2, protein structure initiative; 2.81A {Streptococcus pneumoniae}
Probab=97.91 E-value=4.7e-06 Score=69.52 Aligned_cols=58 Identities=14% Similarity=0.289 Sum_probs=50.2
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
+.+.+|+++|++ ++.++++++++. ++++.|.++++ +||+|++ ++++|+|+.+|+++..
T Consensus 83 ~~~~~v~~im~~--~~~~v~~~~~l~-~~~~~m~~~~~--lpVVd~~-g~l~GiiT~~Dil~~~ 140 (156)
T 3k6e_A 83 MADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDESF--LPVVDAE-GIFQGIITRKSILKAV 140 (156)
T ss_dssp HTTSBGGGTCBC--SCCCBCTTCCHH-HHHHHTTTSSE--EEEECTT-SBEEEEEEHHHHHHHH
T ss_pred ccccCHHHhhcC--CceecccccHHH-HHHHHHHHcCC--eEEEecC-CEEEEEEEHHHHHHHH
Confidence 357789999985 677899999998 99999988764 9999876 8999999999999743
No 106
>2o16_A Acetoin utilization protein ACUB, putative; structural genomics, unknown function, PSI-2, protein struct initiative; 1.90A {Vibrio cholerae} SCOP: d.37.1.1
Probab=97.89 E-value=9.6e-06 Score=67.43 Aligned_cols=58 Identities=19% Similarity=0.251 Sum_probs=52.0
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||+|+ ++++|+|+.+|+++.
T Consensus 75 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~--g~lvGiit~~dil~~ 132 (160)
T 2o16_A 75 AFETPLFEVMHT--DVTSVAPQAGLK-ESAIYMQKHKIGCLPVVAK--DVLVGIITDSDFVTI 132 (160)
T ss_dssp -CCCBHHHHSCS--CEEEBCTTSBHH-HHHHHHHHTTCSCEEEEET--TEEEEEECHHHHHHH
T ss_pred hcccCHHHHhcC--CCeEECCCCCHH-HHHHHHHHhCCCEEEEEEC--CEEEEEEEHHHHHHH
Confidence 356789999986 788999999998 9999999999999999986 799999999999874
No 107
>2yzi_A Hypothetical protein PH0107; sheet/helix/sheet/sheet/helix, structural genomics, unknown function, NPPSFA; 2.25A {Pyrococcus horikoshii} SCOP: d.37.1.1
Probab=97.86 E-value=2.5e-05 Score=62.79 Aligned_cols=59 Identities=20% Similarity=0.342 Sum_probs=52.1
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++ |+|++ ++++|+|+.+|+++..
T Consensus 69 ~~~~~v~~~m~~--~~~~v~~~~~l~-~~~~~m~~~~~~~l-Vvd~~-g~~~Giit~~dil~~~ 127 (138)
T 2yzi_A 69 PYDIPVERIMTR--NLITANVNTPLG-EVLRKMAEHRIKHI-LIEEE-GKIVGIFTLSDLLEAS 127 (138)
T ss_dssp CTTSBGGGTCBC--SCCEEETTSBHH-HHHHHHHHHTCSEE-EEEET-TEEEEEEEHHHHHHHH
T ss_pred cccCCHHHHhhC--CCeEECCCCcHH-HHHHHHHhcCCCEE-EECCC-CCEEEEEEHHHHHHHH
Confidence 356789999986 677899999998 99999999999999 99865 8999999999999753
No 108
>2emq_A Hypothetical conserved protein; CBS domains, NPPSFA, national project on protein structural functional analyses; 2.50A {Geobacillus kaustophilus}
Probab=97.85 E-value=1.7e-05 Score=65.20 Aligned_cols=58 Identities=16% Similarity=0.236 Sum_probs=51.1
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.++++ +||+|++ ++++|+|+.+|+++..
T Consensus 80 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~--l~Vvd~~-g~~~Giit~~dil~~~ 137 (157)
T 2emq_A 80 LETMKVEEVMNR--NIPRLRLDDSLM-KAVGLIVNHPF--VCVENDD-GYFAGIFTRREVLKQL 137 (157)
T ss_dssp GGTCBGGGTCBC--CCCEEETTSBHH-HHHHHHHHSSE--EEEECSS-SSEEEEEEHHHHHHHH
T ss_pred hcCCcHHHHhCC--CCceecCCCcHH-HHHHHHhhCCE--EEEEcCC-CeEEEEEEHHHHHHHH
Confidence 457789999986 677899999998 99999999987 9999875 8999999999998753
No 109
>2j9l_A Chloride channel protein 5; ION channel, ION transport, voltage-gated; HET: ATP; 2.30A {Homo sapiens} SCOP: d.37.1.1 PDB: 2ja3_A*
Probab=97.81 E-value=2e-05 Score=66.56 Aligned_cols=59 Identities=12% Similarity=0.202 Sum_probs=52.4
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++.+++||+| + ++++|+|+.+|+++..
T Consensus 105 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~l~Vvd-~-g~~vGiit~~dll~~l 163 (185)
T 2j9l_A 105 PPTLKLRNILDL--SPFTVTDLTPME-IVVDIFRKLGLRQCLVTH-N-GRLLGIITKKDVLKHI 163 (185)
T ss_dssp CCCEECGGGEES--SCCEEETTSBHH-HHHHHHHHHTCSEEEEEE-T-TEEEEEEEHHHHHHHH
T ss_pred ccCccHHHhhCc--CCeEeCCCCCHH-HHHHHHHhCCCcEEEEEE-C-CEEEEEEEHHHHHHHH
Confidence 456789999986 577899999998 999999999999999998 4 8999999999999743
No 110
>1yav_A Hypothetical protein BSU14130; cystathionine beta synthase (CBS) domain, structural genomics, protein structure initiative, PSI; 2.10A {Bacillus subtilis} SCOP: d.37.1.1
Probab=97.79 E-value=1.7e-05 Score=65.58 Aligned_cols=57 Identities=19% Similarity=0.285 Sum_probs=50.5
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
..+.+++++|.+ ++.++++++++. ++++.|.++++ +||+|++ ++++|+|+.+|+++.
T Consensus 83 ~~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~m~~~~~--lpVvd~~-g~~vGiit~~dil~~ 139 (159)
T 1yav_A 83 LDQITVEEVMLT--DIPRLHINDPIM-KGFGMVINNGF--VCVENDE-QVFEGIFTRRVVLKE 139 (159)
T ss_dssp TTTSBHHHHSBC--SCCEEETTSBHH-HHHHHTTTCSE--EEEECTT-CBEEEEEEHHHHHHH
T ss_pred hccCCHHHhcCC--CCceEcCCCCHH-HHHHHHHhCCE--EEEEeCC-CeEEEEEEHHHHHHH
Confidence 467889999986 677899999998 99999998887 9999875 899999999999874
No 111
>3ctu_A CBS domain protein; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 2.81A {Streptococcus pneumoniae TIGR4} PDB: 3k6e_A
Probab=97.75 E-value=1.5e-05 Score=65.71 Aligned_cols=57 Identities=14% Similarity=0.260 Sum_probs=49.8
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
.+.+++++|++ ++.++++++++. ++++.|.+++ ++||+|++ ++++|+|+.+|+++..
T Consensus 84 ~~~~v~~~m~~--~~~~v~~~~~l~-~a~~~~~~~~--~lpVvd~~-g~~~Giit~~dil~~l 140 (156)
T 3ctu_A 84 ADTDIVHMTKT--DVAVVSPDFTIT-EVLHKLVDES--FLPVVDAE-GIFQGIITRKSILKAV 140 (156)
T ss_dssp TTSBGGGGCBC--SCCCBCSSCCHH-HHHHHTTTSS--EEEEECTT-SBEEEEEETTHHHHHH
T ss_pred ccCcHHHhccC--CceeeCCCCcHH-HHHHHHHHcC--eEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 47889999985 677899999998 9999999886 79999865 8999999999999753
No 112
>4avf_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase; 2.23A {Pseudomonas aeruginosa}
Probab=97.72 E-value=8.9e-06 Score=80.47 Aligned_cols=102 Identities=17% Similarity=0.146 Sum_probs=17.1
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccc--cccC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVT--IRRI 279 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~--~~~~ 279 (337)
.+.+++++|+|+.+++++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|+++....... ..+.- .+-.
T Consensus 145 ~~~~V~~vMtp~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-g~lvGiIT~~Dil~~~~~p~a-~kd~~grl~v~ 221 (490)
T 4avf_A 145 AGDTVAAIMTPKDKLVTAREGTPLE-EMKAKLYENRIEKMLVVDEN-FYLRGLVTFRDIEKAKTYPLA-SKDEQGRLRVG 221 (490)
T ss_dssp ----------------------------------------------------------------CTTC-CBCTTSCBCCE
T ss_pred cCCcHHHHhccCCCCEEECCCCcHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEehHHhhhhccCcch-hhhccCcceee
Confidence 4568999999876789999999998 99999999999999999976 899999999999985432111 11110 1111
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEe
Q 019653 280 PRVPETLPLYEILNEFQKGHSHMAVVVR 307 (337)
Q Consensus 280 ~~V~~~~~l~~~l~~m~~~~~~~aiVvD 307 (337)
..+-.+..-.+..+.+.+.+.... ++|
T Consensus 222 aavG~~~~~~~~a~~l~~aG~d~I-~id 248 (490)
T 4avf_A 222 AAVGTGADTGERVAALVAAGVDVV-VVD 248 (490)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEE-EEE
T ss_pred eeeccccchHHHHHHHhhcccceE-Eec
Confidence 123333344666777777777754 555
No 113
>2yvy_A MGTE, Mg2+ transporter MGTE; membrane protein, transport protein; 2.30A {Thermus thermophilus} PDB: 2yvz_A
Probab=97.70 E-value=2.9e-05 Score=70.78 Aligned_cols=61 Identities=18% Similarity=0.400 Sum_probs=53.8
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (337)
-.+.+++++|++ ++.++++++++. ++++.|.+++...+||+|++ ++++|+|+..|++....
T Consensus 196 ~~~~~v~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~~~lpVvd~~-g~lvGivT~~Dil~~i~ 256 (278)
T 2yvy_A 196 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVLE 256 (278)
T ss_dssp CTTCBSTTTSBS--SCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHC-
T ss_pred CCCCcHHHHhCC--CCeEEeCCCCHH-HHHHHHHhcCCCEEEEEeCC-CeEEEEEEHHHHHHHHH
Confidence 357789999975 577899999998 99999999999999999876 89999999999998643
No 114
>4fxs_A Inosine-5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.24A {Vibrio cholerae o1 biovar el tor}
Probab=97.65 E-value=9e-06 Score=80.52 Aligned_cols=61 Identities=18% Similarity=0.232 Sum_probs=44.6
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
.+.+++|+|+|+.+++++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..
T Consensus 147 ~~~~v~diM~p~~~~vtv~~~~~l~-ea~~~m~~~~i~~lpVVDe~-G~l~GiIT~~DIl~~~ 207 (496)
T 4fxs_A 147 LTKSVAAVMTPKERLATVKEGATGA-EVQEKMHKARVEKILVVNDE-FQLKGMITAKDFHKAE 207 (496)
T ss_dssp TTSBGGGTSEEGGGCCEEECC-----CGGGTCC---CCCEEEECTT-SBCCEEECCC-----C
T ss_pred CCCcHHHHhcCCCCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CCEEEeehHhHHHHhh
Confidence 5678999999877788999999998 99999999999999999986 8999999999999754
No 115
>2oux_A Magnesium transporter; 10001B, structural genomics, PSI-2, P structure initiative, nysgxrc; 2.16A {Enterococcus faecalis} SCOP: a.118.26.1 d.37.1.1
Probab=97.63 E-value=3.5e-05 Score=70.71 Aligned_cols=60 Identities=12% Similarity=0.326 Sum_probs=53.3
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
..+.+++++|++ ++.++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|++...
T Consensus 198 ~~~~~v~~im~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIT~~Dil~~i 257 (286)
T 2oux_A 198 DDDTLIADILNE--RVISVHVGDDQE-DVAQTIRDYDFLAVPVTDYD-DHLLGIVTVDDIIDVI 257 (286)
T ss_dssp CTTSBHHHHSBS--CCCCEETTSBHH-HHHHHHHHHTCSEEEEECTT-CBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHcCC--CCeeecCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHHHH
Confidence 356789999985 677899999998 99999999999999999876 8999999999999753
No 116
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=97.59 E-value=1.3e-05 Score=79.18 Aligned_cols=101 Identities=16% Similarity=0.289 Sum_probs=22.9
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccCc-
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRIP- 280 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~~- 280 (337)
.+.+++++|++++++.++++++++. ++++.|.+++..++||+|++ ++++|+|+.+|+++..... ...++...+-..
T Consensus 153 ~~~~v~~im~~~~~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~-~~~~D~~~~l~vg 229 (494)
T 1vrd_A 153 LSKKIKDLMTPREKLIVAPPDISLE-KAKEILHQHRIEKLPLVSKD-NKLVGLITIKDIMSVIEHP-NAARDEKGRLLVG 229 (494)
T ss_dssp ----------------------------------------------------------CHHHHTCT-TCCBCTTSCBCCE
T ss_pred CCCcHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCcEEEEEcCC-CeEEEEEEHHHHHhhhccc-cccccchhhhccc
Confidence 4568999999867889999999998 99999999999999999976 8999999999999754321 111121000000
Q ss_pred -eeCCCCCHHHHHHHHhhCCCeEEEE
Q 019653 281 -RVPETLPLYEILNEFQKGHSHMAVV 305 (337)
Q Consensus 281 -~V~~~~~l~~~l~~m~~~~~~~aiV 305 (337)
-+.......+.++.+.+.+.....+
T Consensus 230 a~ig~~~~~~~~a~~l~~aGvd~v~i 255 (494)
T 1vrd_A 230 AAVGTSPETMERVEKLVKAGVDVIVI 255 (494)
T ss_dssp EEECSSTTHHHHHHHHHHTTCSEEEE
T ss_pred cccCcCHhHHHHHHHHHHhCCCEEEE
Confidence 2333456678888888888886644
No 117
>2pfi_A Chloride channel protein CLC-Ka; cystathionine beta synthetase (CBS) domains containing protein, transport protein; 1.60A {Homo sapiens}
Probab=97.59 E-value=4.2e-05 Score=63.14 Aligned_cols=59 Identities=12% Similarity=0.067 Sum_probs=50.5
Q ss_pred cccccccccccCc----eEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhc
Q 019653 202 TEKTASDAMTPIA----ETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTI 263 (337)
Q Consensus 202 ~~~~V~dIMtpr~----~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~ 263 (337)
.+.+++++|.+.. .+.++++++++. ++++.|.+++.+++||+| + ++++|+|+.+|+++.
T Consensus 82 ~~~~v~~~m~~~~~~~~~~~~v~~~~~l~-~~~~~m~~~~~~~lpVvd-~-g~l~Giit~~dil~~ 144 (164)
T 2pfi_A 82 HQQCLQDILARGCPTEPVTLTLFSETTLH-QAQNLFKLLNLQSLFVTS-R-GRAVGCVSWVEMKKA 144 (164)
T ss_dssp CCCBHHHHHHTTCCCBCCCCCEETTCBHH-HHHHHHHHTTCSEEEEEE-T-TEEEEEEEHHHHHHH
T ss_pred ccchhhhhhcccccccCCceEECCCCcHH-HHHHHHHHhCCCEEEEEE-C-CEEEEEEEHHHHHHH
Confidence 4567899997531 157899999998 999999999999999998 4 899999999999874
No 118
>3ocm_A Putative membrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: ADP; 1.80A {Bordetella parapertussis}
Probab=97.58 E-value=7.5e-05 Score=63.18 Aligned_cols=57 Identities=14% Similarity=0.109 Sum_probs=48.8
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
.+.+++ +|. ++.++++++++. ++++.|.+++...+||+|++ ++++|+|+.+|+++..
T Consensus 99 ~~~~v~-~~~---~~~~v~~~~~l~-~al~~m~~~~~~~~~Vvde~-g~lvGiIT~~Dil~~l 155 (173)
T 3ocm_A 99 GRVRRN-RLR---DPIIVHESIGIL-RLMDTLKRSRGQLVLVADEF-GAIEGLVTPIDVFEAI 155 (173)
T ss_dssp SSCCGG-GSB---CCCEECGGGCHH-HHHHHHHHSTTCCEEEECTT-CCEEEEECHHHHHHHH
T ss_pred CcchhH-hcC---CCeEECCCCcHH-HHHHHHHHcCCeEEEEEeCC-CCEEEEEeHHHHHHHH
Confidence 456777 553 467899999998 99999999999999999876 8999999999999743
No 119
>3org_A CMCLC; transporter, transport protein; 3.50A {Cyanidioschyzon merolae}
Probab=97.51 E-value=7.3e-05 Score=76.19 Aligned_cols=56 Identities=11% Similarity=0.064 Sum_probs=48.5
Q ss_pred ccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCC
Q 019653 205 TASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHP 265 (337)
Q Consensus 205 ~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~ 265 (337)
+++|+|++ ++.++++|+++. ++.+.|.+++.+++||+ ++ ++++|+|+.+|+++...
T Consensus 569 ~v~~iMt~--~pitV~~~~~l~-ea~~~M~~~~i~~lpVv-e~-G~lvGIVT~~Dll~~~~ 624 (632)
T 3org_A 569 SLVVPCDV--SPIVVTSYSLVR-QLHFLFVMLMPSMIYVT-ER-GKLVGIVEREDVAYGYS 624 (632)
T ss_dssp --CCSCCC--CCCEEETTCBHH-HHHHHHHHTCCSEEEEE-ET-TEEEEEEEGGGTEECCC
T ss_pred ccchhhcC--CCceecCCCcHH-HHHHHHHhcCCCEEEEE-EC-CEEEEEEehhhHHHHHh
Confidence 48999986 567899999998 99999999999999999 44 89999999999997653
No 120
>2zy9_A Mg2+ transporter MGTE; membrane protien, metal transport; 2.94A {Thermus thermophilus} PDB: 2yvx_A
Probab=97.48 E-value=8.8e-05 Score=72.96 Aligned_cols=60 Identities=18% Similarity=0.409 Sum_probs=53.8
Q ss_pred ccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 201 LTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 201 l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
-.+.+++++|++ ++.+++++++++ ++.+.|.+++...+||+|++ ++++|+|+.+|+++..
T Consensus 216 ~~~~~v~dim~~--~~~~v~~~~~l~-ea~~~m~~~~~~~lpVVDe~-g~lvGiIT~~Dil~~i 275 (473)
T 2zy9_A 216 DPRTRVAEIMNP--KVVYVRTDTDQE-EVARLMADYDFTVLPVVDEE-GRLVGIVTVDDVLDVL 275 (473)
T ss_dssp CTTSBGGGTSBS--SCCCEESSSBHH-HHHHHHHHHTCSEEEEECTT-SBEEEEEEHHHHHHHH
T ss_pred CCCCcHHHHhCC--CCeEEeCCCcHH-HHHHHHHhcCCcEEEEEcCC-CEEEEEEehHhhHHHH
Confidence 367899999975 678899999998 99999999999999999976 8999999999999743
No 121
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=97.33 E-value=5.7e-05 Score=74.59 Aligned_cols=97 Identities=21% Similarity=0.334 Sum_probs=17.6
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCcc----ccccc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVK----SVTIR 277 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~----~i~~~ 277 (337)
.+.+++++|++ ++.++++++++. ++++.|.+++...+||+|++ ++++|+++.+|+++...... ... .++..
T Consensus 148 ~~~~v~~im~~--~~~~v~~~~~l~-eal~~m~~~~~~~lpVVde~-g~lvGiiT~~Dil~~~~~~~-~~~~~~g~~~v~ 222 (486)
T 2cu0_A 148 EGKLVKELMTK--EVITVPESIEVE-EALKIMIENRIDRLPVVDER-GKLVGLITMSDLVARKKYKN-AVRDENGELLVA 222 (486)
T ss_dssp ---------------------------------------------------------------CCTT-CCBCTTSCBCCE
T ss_pred CCCCHHHHccC--CCeEECCcCcHH-HHHHHHHHcCCCEEEEEecC-CeEEEEEEHHHHHHhhhccc-cccccCCceeec
Confidence 45689999985 678899999998 99999999999999999876 88999999999998653211 111 11111
Q ss_pred cCceeCCCCCHHHHHHHHhhCCCeEEEEEec
Q 019653 278 RIPRVPETLPLYEILNEFQKGHSHMAVVVRQ 308 (337)
Q Consensus 278 ~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe 308 (337)
. .++.+ . .+.+..+.+.+.+.. |+|.
T Consensus 223 ~--~~~~~-~-~~~a~~l~~~gvd~l-vvdt 248 (486)
T 2cu0_A 223 A--AVSPF-D-IKRAIELDKAGVDVI-VVDT 248 (486)
T ss_dssp E--EECTT-C-HHHHHHHHHTTCSEE-EEEC
T ss_pred c--eechh-h-HHHHHHHHHhcCCce-EEEe
Confidence 1 12322 3 566778888888764 6664
No 122
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=97.18 E-value=0.00026 Score=70.30 Aligned_cols=98 Identities=13% Similarity=0.155 Sum_probs=57.6
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCccccccccC--
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRRI-- 279 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~~-- 279 (337)
.+.+++++|++..++.++++++++. ++.+.|.+++..++||+|++ ++++|+|+.+|+++...... ...+ +....
T Consensus 171 ~~~~v~~vm~~~~~~~tv~~~~~l~-ea~~~m~~~~~~~lpVVd~~-g~lvGiIt~~Dll~~~~~~~-~~~~-~~~rl~v 246 (514)
T 1jcn_A 171 HTTLLSEVMTPRIELVVAPAGVTLK-EANEILQRSKKGKLPIVNDC-DELVAIIARTDLKKNRDYPL-ASKD-SQKQLLC 246 (514)
T ss_dssp ----------CCBCCCCEETTCCST-TTTTHHHHHTCSCCCEESSS-SCCC----CCCCSSCCCCTT-CCBC-TTSCBCC
T ss_pred CCCCHHHHhCCCCCCeEECCCCCHH-HHHHHHHHcCCCcccEECCC-CeEEEEEEHHHHHHHhhCcc-hhcc-cCCceee
Confidence 4568999999766788999999998 99999999999999999976 89999999999997543211 1111 11111
Q ss_pred -ceeCCCCCHHHHHHHHhhCCCeEE
Q 019653 280 -PRVPETLPLYEILNEFQKGHSHMA 303 (337)
Q Consensus 280 -~~V~~~~~l~~~l~~m~~~~~~~a 303 (337)
..+..+....+..+.+.+.+.+..
T Consensus 247 ga~vG~~~~~~~~a~~~~~aG~d~v 271 (514)
T 1jcn_A 247 GAAVGTREDDKYRLDLLTQAGVDVI 271 (514)
T ss_dssp EEEECSSTTHHHHHHHHHHTTCSEE
T ss_pred eeEecCchhhHHHHHHHHHcCCCEE
Confidence 123333345666666777776644
No 123
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=97.18 E-value=5.8e-05 Score=74.31 Aligned_cols=124 Identities=15% Similarity=0.120 Sum_probs=26.2
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCC-C---ccccccc
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEV-P---VKSVTIR 277 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~-~---v~~i~~~ 277 (337)
.+.+|+|+||+ ++++++.+.+++ ++.+.|.+++..++||+|++ ++++|+|+.+|+.+....... . -+.+...
T Consensus 198 ~~~~V~evMT~--~lvt~~~~~~le-eA~~iL~~~kieklpVVd~~-g~LvGlIT~kDi~k~~~~p~A~k~d~~grL~Vg 273 (556)
T 4af0_A 198 AETPIKSVMTT--EVVTGSSPITLE-KANSLLRETKKGKLPIVDSN-GHLVSLVARSDLLKNQNYPYASKVPESKQLYCG 273 (556)
T ss_dssp ----------------------------------------------------------------CTTCCBCTTTCCBCCE
T ss_pred cceEhhhhccc--ceEEecCCCCHH-HHHHHHHHccccceeEEccC-CcEEEEEEechhhhhhhCCcchhcchhhceeeE
Confidence 35689999996 699999999998 99999999999999999987 899999999999874321111 0 1112111
Q ss_pred cCceeCCCCCHHHHHHHHhhCCCeEEEEEec-CCCCCCCCCCCCCccccCCCCcee
Q 019653 278 RIPRVPETLPLYEILNEFQKGHSHMAVVVRQ-YNKNAEQPASNPASKSAYGRSPLI 332 (337)
Q Consensus 278 ~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe-~G~~~~~~~~~~~~~~~~~~~~~~ 332 (337)
-..-+.+ .-.+-.+.+.+.+..+. |+|- +|.....+..-...+..|.+-|+|
T Consensus 274 AAVgv~~--d~~eR~~aLv~AGvD~i-viD~ahGhs~~v~~~i~~ik~~~p~~~vi 326 (556)
T 4af0_A 274 AAIGTRP--GDKDRLKLLAEAGLDVV-VLDSSQGNSVYQIEFIKWIKQTYPKIDVI 326 (556)
T ss_dssp EEECSSH--HHHHHHHHHHHTTCCEE-EECCSCCCSHHHHHHHHHHHHHCTTSEEE
T ss_pred EEeccCc--cHHHHHHHHHhcCCcEE-EEeccccccHHHHHHHHHHHhhCCcceEE
Confidence 1122222 23566677778888866 5553 333333333333333444444444
No 124
>1zfj_A Inosine monophosphate dehydrogenase; IMPDH, CBS domains, oxidoreductase; HET: IMP; 1.90A {Streptococcus pyogenes} SCOP: c.1.5.1 d.37.1.1
Probab=97.10 E-value=0.00059 Score=67.21 Aligned_cols=102 Identities=16% Similarity=0.190 Sum_probs=70.7
Q ss_pred cccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcCCCCCCCcccccccc--C
Q 019653 202 TEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIHPEDEVPVKSVTIRR--I 279 (337)
Q Consensus 202 ~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~~~~~~~v~~i~~~~--~ 279 (337)
.+.+++++|++ .++.++++++++. ++++.|.+++..++||+|++ ++++|+++.+|+++...... ...+...+- .
T Consensus 150 ~~~~v~~im~~-~~~~~v~~~~~l~-~a~~~m~~~~~~~lpVVd~~-g~lvGivt~~Dil~~~~~~~-~~~d~~~~~~vg 225 (491)
T 1zfj_A 150 YNAPISEHMTS-EHLVTAAVGTDLE-TAERILHEHRIEKLPLVDNS-GRLSGLITIKDIEKVIEFPH-AAKDEFGRLLVA 225 (491)
T ss_dssp SSSBTTTSCCC-SCCCCEETTCCHH-HHHHHHHHTTCSEEEEECTT-SBEEEEEEHHHHHHHHHCTT-CCBCTTSCBCCE
T ss_pred CCCcHHHHcCC-CCCEEECCCCCHH-HHHHHHHHcCCCEEEEEcCC-CcEEEEEEHHHHHHHHhccc-cccCcCCcEEEE
Confidence 56789999985 2567899999998 99999999999999999976 89999999999997542211 011110000 1
Q ss_pred ceeCCCCCHHHHHHHHhhCCCeEEEEEec
Q 019653 280 PRVPETLPLYEILNEFQKGHSHMAVVVRQ 308 (337)
Q Consensus 280 ~~V~~~~~l~~~l~~m~~~~~~~aiVvDe 308 (337)
..+.......+-.+.+.+.+.... +++-
T Consensus 226 ~~i~~~~~~~~~a~~l~~~G~d~i-vi~~ 253 (491)
T 1zfj_A 226 AAVGVTSDTFERAEALFEAGADAI-VIDT 253 (491)
T ss_dssp EEECSSTTHHHHHHHHHHHTCSEE-EECC
T ss_pred EeccCchhHHHHHHHHHHcCCCeE-EEee
Confidence 123333444566677777777755 4553
No 125
>2d4z_A Chloride channel protein; CLC chloride channel cytoplasmic domain, CBS domains, ION CH regulatory subunit, transport protein; 3.10A {Torpedo marmorata} SCOP: d.37.1.1
Probab=97.08 E-value=0.00072 Score=60.82 Aligned_cols=52 Identities=13% Similarity=0.178 Sum_probs=46.6
Q ss_pred cccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCCCCcEeEEeEhhhhhhcC
Q 019653 208 DAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEEPTNIIGLILVKNLLTIH 264 (337)
Q Consensus 208 dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~~~~ivGiv~~kDll~~~ 264 (337)
.+|.| ..+++.+++++. ++.++|++.|..++||++. |+++|+|+.|||+++.
T Consensus 193 ~~md~--sP~tv~~~tsL~-~v~~LF~~lglr~l~V~~~--GrLVGIVTrkDl~kai 244 (250)
T 2d4z_A 193 CRIDQ--SPFQLVEGTSLQ-KTHTLFSLLGLDRAYVTSM--GKLVGVVALAEIQAAI 244 (250)
T ss_dssp SCEEC--CSCCBCTTCBHH-HHHHHHHHHTCSEEEEEET--TEEEEEEEHHHHHHHH
T ss_pred ccccC--CCeEECCCCcHH-HHHHHHHHhCCeEEEEEEC--CEEEEEEEHHHHHHHH
Confidence 46886 678999999998 8999999999999999974 8999999999999754
No 126
>3fio_A A cystathionine beta-synthase domain protein fused to A Zn-ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus} PDB: 3ghd_A
Probab=96.96 E-value=0.00014 Score=51.24 Aligned_cols=47 Identities=9% Similarity=0.027 Sum_probs=41.3
Q ss_pred cCceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcccc
Q 019653 278 RIPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSA 325 (337)
Q Consensus 278 ~~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~ 325 (337)
++.++++++++.++++.|++++.+.++|+|+ |...|+++..|.++..
T Consensus 1 ~~~~v~~~~~~~~a~~~m~~~~~~~~pV~d~-~~l~Givt~~dl~~~~ 47 (70)
T 3fio_A 1 KAIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKV 47 (70)
T ss_dssp CEEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHT
T ss_pred CCeEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 3567999999999999999999999999998 9999999997765543
No 127
>3pc3_A CG1753, isoform A; CBS, synthase, PLP, heme, aminoacrylate, lyase; HET: HEM P1T; 1.55A {Drosophila melanogaster} PDB: 3pc2_A* 3pc4_A*
Probab=96.67 E-value=0.0014 Score=65.13 Aligned_cols=69 Identities=13% Similarity=0.159 Sum_probs=53.7
Q ss_pred HHHHHHhhh---cccccccccccccCceEEEEeCCCCchHHHHHHHHhcCCcEEEEEcCC---CCcEeEEeEhhhhhhcC
Q 019653 191 ETTIIAGAL---ELTEKTASDAMTPIAETFAIDINAKLDKELMNLILEKGHSRVPVYYEE---PTNIIGLILVKNLLTIH 264 (337)
Q Consensus 191 E~~~l~~~l---~l~~~~V~dIMtpr~~v~~v~~~~~l~~~~~~~l~~~~~sr~PV~~~~---~~~ivGiv~~kDll~~~ 264 (337)
+++++.... ...+.+|+++|++ ++.++++++++. ++++.|.++++ .||+|++ .++++|+|+.+|+++..
T Consensus 435 ~~Dll~~l~~~~~~~~~~V~~im~~--~~~~v~~~~~l~-~a~~~m~~~~~--~pVVd~~~~~~g~lvGIVT~~Dll~~l 509 (527)
T 3pc3_A 435 QETLITQIVSMNRQQSDPAIKALNK--RVIRLNESEILG-KLARVLEVDPS--VLILGKNPAGKVELKALATKLDVTTFI 509 (527)
T ss_dssp HHHHHHHHHHHCCCTTSBGGGGEET--TCCEEETTSBHH-HHHHHHTTCSE--EEEEEECSSSCEEEEEEEEHHHHHHHH
T ss_pred HHHHHHHHHhccCcCCCcHHHHhcC--CCeEECCCCcHH-HHHHHHhhCCE--EEEEeCCcccCCeEEEEEEHHHHHHHH
Confidence 344444433 3456789999985 678899999998 99999977665 6999874 37899999999999854
No 128
>3ghd_A A cystathionine beta-synthase domain protein FUSE ribbon-like domain; PF1953,APC40009,cystathionine beta-synthase domain protein; 1.81A {Pyrococcus furiosus}
Probab=96.60 E-value=0.00043 Score=49.61 Aligned_cols=46 Identities=9% Similarity=0.008 Sum_probs=40.2
Q ss_pred CceeCCCCCHHHHHHHHhhCCCeEEEEEecCCCCCCCCCCCCCcccc
Q 019653 279 IPRVPETLPLYEILNEFQKGHSHMAVVVRQYNKNAEQPASNPASKSA 325 (337)
Q Consensus 279 ~~~V~~~~~l~~~l~~m~~~~~~~aiVvDe~G~~~~~~~~~~~~~~~ 325 (337)
+.++.+++++.++++.|.+++...++|+|+ |+..|++|-.|..+..
T Consensus 2 ~vtv~p~~tv~ea~~~M~~~~i~~~~V~d~-~~lvGIvT~~Di~~~~ 47 (70)
T 3ghd_A 2 AIVVQPKDTVDRVAKILSRNKAGSAVVMEG-DEILGVVTERDILDKV 47 (70)
T ss_dssp EEEECTTCBHHHHHHHHHHTTCSEEEEEET-TEEEEEEEHHHHHHHT
T ss_pred CEEECCCCcHHHHHHHHHHcCCCEEEEEEC-CEEEEEEEHHHHHHHH
Confidence 457999999999999999999999999984 8999999988865443
No 129
>3arc_L Photosystem II reaction center protein L; PSII, membrane-protein complex, transmembrane alpha-helix, E transport, photosynthesis; HET: OEX CLA PHO BCR PL9 SQD LMG UNL LMT HTG DGD LHG HEM; 1.90A {Thermosynechococcus vulcanus} PDB: 1s5l_L* 3a0b_L* 3a0h_L* 2axt_L* 3bz1_L* 3bz2_L* 3kzi_L* 3prq_L* 3prr_L*
Probab=31.84 E-value=50 Score=19.77 Aligned_cols=18 Identities=11% Similarity=0.573 Sum_probs=11.5
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 019653 12 FIIHIVVIVFLVMFAGLM 29 (337)
Q Consensus 12 ~~~~~~~i~~ll~lsa~f 29 (337)
+|-.+++.++.+++|..|
T Consensus 18 y~GLLlifvlavlFssyf 35 (37)
T 3arc_L 18 YLGLLLILVLALLFSSYF 35 (37)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhc
Confidence 466666666667776655
No 130
>2jaf_A Halorhodopsin, HR; chromophore, chloride pump, ION transport, membrane, chloride, receptor, ION pump, transport, sensory transduction; HET: BOG PLM RET; 1.7A {Halobacterium salinarium} PDB: 2jag_A* 1e12_A*
Probab=26.81 E-value=3.3e+02 Score=23.99 Aligned_cols=39 Identities=23% Similarity=0.428 Sum_probs=24.3
Q ss_pred HHHhhhchhhHHHHhhhHHHhhHhHHHHHHHHHHHHHHHHH
Q 019653 109 LLFGEIIPQSVCSRYGLAIGSTVAPFVRVLVWICYPVAFPI 149 (337)
Q Consensus 109 lifgEiiPK~la~~~~~~ia~~~a~~l~~~~~l~~P~v~~l 149 (337)
.++++. .|+...+ .-+-+....+.+..+.|..||++|.+
T Consensus 178 ~l~~~~-~~~a~~~-~v~~~f~~l~~~v~v~W~iYPI~w~l 216 (274)
T 2jaf_A 178 ALVTDW-AASASSA-GTAEIFDTLRVLVVVLWLGYPIVWAV 216 (274)
T ss_dssp HHHTHH-HHHHHHH-TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHhhhh-HHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344554 6654444 44444455556667788899999965
No 131
>1p0z_A Sensor kinase CITA; transferase; HET: FLC MO7; 1.60A {Klebsiella pneumoniae} SCOP: d.110.6.1 PDB: 2v9a_A 2j80_A*
Probab=20.51 E-value=49 Score=25.28 Aligned_cols=21 Identities=19% Similarity=0.436 Sum_probs=15.8
Q ss_pred EEEEEcCCCCcEeEEeEhhhhh
Q 019653 240 RVPVYYEEPTNIIGLILVKNLL 261 (337)
Q Consensus 240 r~PV~~~~~~~ivGiv~~kDll 261 (337)
..||++++ ++++|+|..+-.+
T Consensus 105 ~~PV~~~~-g~viGvv~vg~~l 125 (131)
T 1p0z_A 105 KSPIQDAT-GKVIGIVSVGYTI 125 (131)
T ss_dssp EEEEECTT-CCEEEEEEEEEEG
T ss_pred EEeEECCC-CCEEEEEEEEEEh
Confidence 35998754 8999999876544
Done!