BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019657
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5U1Y0|TM192_RAT Transmembrane protein 192 OS=Rattus norvegicus GN=Tmem192 PE=2 SV=1
Length = 266
Score = 52.4 bits (124), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 59/109 (54%), Gaps = 4/109 (3%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L +F++Y Y +K+R +GY + +H+ L I + G A+LL++ +
Sbjct: 101 VILWILHLLFERYIQYHHRKVRSRGYSQIYRSTRHLKALALTIHSSGNTALLLLLCVQYS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMK 184
P + L + +L ++ L E IC+ S + +Y + ++N QPDV++
Sbjct: 161 FPEPNKLYLELILAVLAL-ELICSLSCLVLYTVKIRRFNKAKPQPDVLE 208
>sp|Q6NYE7|TM192_DANRE Transmembrane protein 192 OS=Danio rerio GN=tmem192 PE=2 SV=1
Length = 271
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 79/170 (46%), Gaps = 20/170 (11%)
Query: 79 VILLALTGIFQQYFVYQ--VQK----IRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLV 132
V+LL ++ F+Y VQ+ +R +GY F + K I LP I + G AA+L V
Sbjct: 99 VVLLGKVALWVVVFIYDRVVQRRHSAVRRKGYLDFYRMTKGIKSLPLLIHSAGNAAILTV 158
Query: 133 I----VWRPHISILSISTLLRII---MLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKS 185
I + ++ LS+ LL II +L+ IC + Y +V ++N PDV +
Sbjct: 159 IAPSSLLDANVKNLSVYLLLAIICLELLLTIIC----LLRYTVHVVKFNRKKPHPDVTEE 214
Query: 186 LYSPLQPSSSLEGLRYHDGGRLSD---EQMALLQYQRENLHFLSEEILRL 232
S S + + DG L D +Q L+ Y +++ LS IL L
Sbjct: 215 ERSYGCSSDAHTETGFRDGSSLEDVVEKQADLIDYLKQHNSVLSRRILTL 264
>sp|Q9CXT7|TM192_MOUSE Transmembrane protein 192 OS=Mus musculus GN=Tmem192 PE=1 SV=1
Length = 266
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 82/160 (51%), Gaps = 7/160 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
+IL L +F++Y Y +K+R +GY + +H+ L I + G A+LL++ +
Sbjct: 101 LILWILHLLFERYVQYHHRKVRSRGYSQIYRSTRHLKTLALTIHSSGNTALLLLLCVQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVM--KSLYSPLQPS 193
P S L + +L ++ L E IC+ S + +YI + ++N PDV+ + +Y+ +
Sbjct: 161 FPEPSKLYLELILAVLAL-ELICSLSCLILYIVKIRRFNRAKPLPDVLEEEKIYAYPSNT 219
Query: 194 SSLEGLRYHDG-GRLSDEQMALLQYQRENLHFLSEEILRL 232
+S G R + ++Q ++ Y + + LS+ +L L
Sbjct: 220 ASETGFRTVSSLEEIVEKQEDIIVYLKRHNALLSKRLLEL 259
>sp|P47460|HMW2_MYCGE Cytadherence high molecular weight protein 2 OS=Mycoplasma genitalium
(strain ATCC 33530 / G-37 / NCTC 10195) GN=hmw2 PE=3 SV=1
Length = 1805
Score = 39.7 bits (91), Expect = 0.032, Method: Composition-based stats.
Identities = 33/125 (26%), Positives = 60/125 (48%), Gaps = 17/125 (13%)
Query: 206 RLSDEQMALLQYQRENLHFLSEEILR----LQECLSKYEQSDDGSTPQVDLAHLLAARDQ 261
R+ D++ LL+ NLHFLS E R L++ +S +E+ +T + +H +
Sbjct: 1301 RIVDDKNRLLKENERNLHFLSNETERKRAVLEDQISYFEKQRKQATDAILASH------K 1354
Query: 262 ELRTLSAEMNQLQSELRLARSFVAEREAEVLRVRNTNNQLERALEVERMSNIELQKKIST 321
E++ E+ +L EL ++ + A+ R R E +R+ +ELQK + T
Sbjct: 1355 EVKKKEGELQKLLVELETRKTKLNNDFAKFSRQR-------EEFENQRLKLLELQKTLQT 1407
Query: 322 RRNQH 326
+ N +
Sbjct: 1408 QTNSN 1412
>sp|C5E2E7|MPS2_LACTC Monopolar spindle protein 2 OS=Lachancea thermotolerans (strain
ATCC 56472 / CBS 6340 / NRRL Y-8284) GN=MPS2 PE=3 SV=1
Length = 386
Score = 35.4 bits (80), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 51/102 (50%), Gaps = 15/102 (14%)
Query: 206 RLSDEQ-MALLQYQRENLHFLSEEILRLQECL----SKYEQSDDGSTPQVDLAHLLAARD 260
RL D Q + +Q ++ + H L EE++RL+E + SK ++ D T + ++ L +D
Sbjct: 107 RLQDSQAVDGIQDEKTSSHALQEEVMRLREQVRVLSSKNDEKDREITARDEIIADLQGKD 166
Query: 261 ----------QELRTLSAEMNQLQSELRLARSFVAEREAEVL 292
Q +RTL A + L+ EL + E++ E+L
Sbjct: 167 ASPAGSPRSLQRMRTLQARVTSLEDELSFRDEVIREKDRELL 208
>sp|Q5RCG1|TM192_PONAB Transmembrane protein 192 OS=Pongo abelii GN=TMEM192 PE=2 SV=2
Length = 271
Score = 34.7 bits (78), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L + + Y Y KIR +GY + +H+ RL I + G +LL++ +
Sbjct: 101 VILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIRSSGNTVLLLILCMQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKSLYSPLQPSSS 195
P L L+ I+ +E IC+ + +Y + ++N +PD+++ PS+
Sbjct: 161 FPEPGRLY-LDLILAILALELICSLICLLIYTVKIRRFNKAKPEPDILEEEKIYAYPSN- 218
Query: 196 LEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTP 248
+ G R +++ Q + + +L L + L SD G P
Sbjct: 219 ---ITSETGFRTISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTSSDLGCQP 268
>sp|O93308|SMC1A_XENLA Structural maintenance of chromosomes protein 1A OS=Xenopus laevis
GN=smc1a PE=1 SV=1
Length = 1232
Score = 34.3 bits (77), Expect = 1.2, Method: Composition-based stats.
Identities = 36/142 (25%), Positives = 65/142 (45%), Gaps = 21/142 (14%)
Query: 191 QPSSSLEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTPQV 250
Q S GL+ RL Q L Q + +L +E +L+ L+ + +P++
Sbjct: 700 QVQSQAHGLQM----RLKYSQSDLEQTKTRHLAMNMQEKSKLESELANF-------SPRI 748
Query: 251 -DLAHLLAARDQELRTLSAEMNQLQSELRLARSFVAE------REAEVLRVRNTNNQLER 303
D+ ++ +RD+E++ L +MNQ++ E + F E RE E +V+ N ++
Sbjct: 749 NDIKRIIQSRDREMKDLKEKMNQVEDE--VFEEFCREIGVRNIREFEEEKVKRQNEIAKK 806
Query: 304 ALEVERMSNIELQKKISTRRNQ 325
LE E L ++ +NQ
Sbjct: 807 RLEFENQKT-RLGIQLDYEKNQ 827
>sp|Q8IY95|TM192_HUMAN Transmembrane protein 192 OS=Homo sapiens GN=TMEM192 PE=1 SV=1
Length = 271
Score = 34.3 bits (77), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 74/173 (42%), Gaps = 8/173 (4%)
Query: 79 VILLALTGIFQQYFVYQVQKIRLQGYYSFSQKLKHIVRLPFAITAYGTAAMLLVIVWR-- 136
VIL L + + Y Y KIR +GY + +H+ RL I + G +LL++ +
Sbjct: 101 VILWILHLLLECYIQYHHSKIRNRGYNLIYRSTRHLKRLALMIQSSGNTVLLLILCMQHS 160
Query: 137 -PHISILSISTLLRIIMLIEAICAASFMSVYIGYVHQYNSLNSQPDVMKSLYSPLQPSSS 195
P L L+ I+ +E IC+ + +Y + ++N +PD+++ PS+
Sbjct: 161 FPEPGRL-YLDLILAILALELICSLICLLIYTVKIRRFNKAKPEPDILEEEKIYAYPSN- 218
Query: 196 LEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTP 248
+ G R +++ Q + + +L L + L SD G P
Sbjct: 219 ---ITSETGFRTISSLEEIVEKQGDTIEYLKRHNALLSKRLLALTSSDLGCQP 268
>sp|O76329|ACTNB_DICDI Interaptin OS=Dictyostelium discoideum GN=abpD PE=1 SV=1
Length = 1738
Score = 32.7 bits (73), Expect = 4.4, Method: Composition-based stats.
Identities = 22/94 (23%), Positives = 52/94 (55%), Gaps = 4/94 (4%)
Query: 209 DEQMALLQYQ-RENLHFLSEEILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQELRTLS 267
DE++ +Q++ +E LSE+ +LQ Q +D + +V + +D++L+++
Sbjct: 1238 DEKLQSIQFENQEKEKQLSEKDEKLQSIQQNLNQLNDENQEKVKQ---FSEKDEKLQSIQ 1294
Query: 268 AEMNQLQSELRLARSFVAEREAEVLRVRNTNNQL 301
++NQL+ E + ++E++ ++ ++ NQL
Sbjct: 1295 QDLNQLKQENQEKEKQLSEKDEKLQSIQQDLNQL 1328
>sp|Q8VDD5|MYH9_MOUSE Myosin-9 OS=Mus musculus GN=Myh9 PE=1 SV=4
Length = 1960
Score = 32.0 bits (71), Expect = 6.3, Method: Composition-based stats.
Identities = 35/139 (25%), Positives = 64/139 (46%), Gaps = 18/139 (12%)
Query: 205 GRLSDEQMALLQYQRENLHFLSEEILRLQECLSKY--------EQSDDGSTPQVDL---A 253
G L++E ALLQ + ++ H + +LQE K+ E +D + QV+L
Sbjct: 1227 GELANEVKALLQGKGDSEHKRKKVEAQLQELQVKFSEGERVRTELADKVTKLQVELDSVT 1286
Query: 254 HLLAARDQELRTLSAEMNQLQSELRLARSFVAEREAEVL-------RVRNTNNQLERALE 306
LL+ D + L+ + + L+S+L+ + + E + L ++ + N LE
Sbjct: 1287 GLLSQSDSKSSKLTKDFSALESQLQDTQELLQEENRQKLSLSTKLKQMEDEKNSFREQLE 1346
Query: 307 VERMSNIELQKKISTRRNQ 325
E + L+K+I+T Q
Sbjct: 1347 EEEEAKRNLEKQIATLHAQ 1365
>sp|E6ZHJ8|FXL15_DICLA F-box/LRR-repeat protein 15 OS=Dicentrarchus labrax GN=fbxl15 PE=3
SV=1
Length = 292
Score = 32.0 bits (71), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 193 SSSLEGLRYHDGGRLSDEQMALLQYQRENLHFLSEEILRLQ------------ECLSKYE 240
S SL L H GG S + A Q + + + +L+++ L+L+ E + +
Sbjct: 148 SLSLRSLADHCGGLQSIDLTACRQLKDDAICYLAKKCLKLRSLSLAVNANITDESVEEVA 207
Query: 241 QSDDGSTPQVDLAHLLAARDQELRTLSAEMNQLQSELRLARSF-VAEREAEVLRVRNTNN 299
++ G Q+DL L R+Q +RTL+ +LQS L++ V E + LR RN
Sbjct: 208 KNCRG-LEQLDLTGCLRVRNQSIRTLAEYCPKLQS-LKVNHCHNVTESSLDPLRKRNVVI 265
Query: 300 QLERALE 306
+E L+
Sbjct: 266 DVEPPLQ 272
>sp|P35579|MYH9_HUMAN Myosin-9 OS=Homo sapiens GN=MYH9 PE=1 SV=4
Length = 1960
Score = 32.0 bits (71), Expect = 6.8, Method: Composition-based stats.
Identities = 36/150 (24%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 205 GRLSDEQMALLQYQRENLHFLSEEILRLQECLSKY--------EQSDDGSTPQVDLAH-- 254
G L++E LLQ + ++ H + +LQE K+ E +D + QV+L +
Sbjct: 1227 GELANEVKVLLQGKGDSEHKRKKVEAQLQELQVKFNEGERVRTELADKVTKLQVELDNVT 1286
Query: 255 -LLAARDQELRTLSAEMNQLQSELRLARSFVAEREAEVL-------RVRNTNNQLERALE 306
LL+ D + L+ + + L+S+L+ + + E + L +V + N LE
Sbjct: 1287 GLLSQSDSKSSKLTKDFSALESQLQDTQELLQEENRQKLSLSTKLKQVEDEKNSFREQLE 1346
Query: 307 VERMSNIELQKKISTRRNQHGPAESNEHDT 336
E + L+K+I+T Q + D+
Sbjct: 1347 EEEEAKHNLEKQIATLHAQVADMKKKMEDS 1376
>sp|Q02455|MLP1_YEAST Protein MLP1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=MLP1 PE=1 SV=2
Length = 1875
Score = 32.0 bits (71), Expect = 7.2, Method: Composition-based stats.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 5/118 (4%)
Query: 206 RLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGS-TPQVDLAHLLAARDQELR 264
++ DE++ ++ R + + E +L+ + E G T ++ L + QEL
Sbjct: 146 KILDERLKEIELVRVENNRSNSECKKLRSTIMDLETKQQGYITNDLNSRTELERKTQELT 205
Query: 265 TLSAEMNQLQSELRLAR----SFVAEREAEVLRVRNTNNQLERALEVERMSNIELQKK 318
L + + L+ ELR S+ + + +L +RN N+L ++ER +N L++K
Sbjct: 206 LLQSNNDWLEKELRSKNEQYLSYRQKTDKVILDIRNELNRLRNDFQMERTNNDVLKQK 263
>sp|P08799|MYS2_DICDI Myosin-2 heavy chain OS=Dictyostelium discoideum GN=mhcA PE=1 SV=3
Length = 2116
Score = 31.6 bits (70), Expect = 8.2, Method: Composition-based stats.
Identities = 27/115 (23%), Positives = 58/115 (50%), Gaps = 8/115 (6%)
Query: 210 EQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQELRTLSAE 269
EQ A Q +EN +E L+E K+ +S+ T + + L + + +A+
Sbjct: 1998 EQKAKNQQIKENKKIETE----LKEYRKKFGESEKTKTKEFLVVEKLETDYKRAKKEAAD 2053
Query: 270 MNQ----LQSELRLARSFVAEREAEVLRVRNTNNQLERALEVERMSNIELQKKIS 320
Q ++++LR S ++ + + +++ +++ +R LE E S IE+Q+K++
Sbjct: 2054 EQQQRLTVENDLRKHLSEISLLKDAIDKLQRDHDKTKRELETETASKIEMQRKMA 2108
>sp|P24759|ATI_VACCW A-type inclusion protein A25 OS=Vaccinia virus (strain Western
Reserve) GN=VACWR148 PE=1 SV=2
Length = 725
Score = 31.6 bits (70), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 59/125 (47%), Gaps = 13/125 (10%)
Query: 204 GGRLSDEQMALLQYQRENLHFLSEEILRLQECLSKYEQSDDGSTPQVDLAHLLAARDQEL 263
LSD+ + +R+++ + +E I RL + + ++ +G+ DL + +EL
Sbjct: 438 NAELSDKLSKIRTLERDSV-YKTERIDRLTKEIKEHRDIQNGTDDGSDLLEIDKKTIREL 496
Query: 264 RTLSAEMNQLQSELRLARSFVAEREAEVLRVRNTNNQLERALEVERM----SNIELQKKI 319
R +++SEL E+E + +R + +R LE+ RM + +L+ +I
Sbjct: 497 RESLDREREMRSEL--------EKELDTIRNGKVDGSCQRELELSRMWLKQRDDDLRAEI 548
Query: 320 STRRN 324
RRN
Sbjct: 549 DKRRN 553
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 113,312,204
Number of Sequences: 539616
Number of extensions: 4259834
Number of successful extensions: 15233
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 24
Number of HSP's successfully gapped in prelim test: 198
Number of HSP's that attempted gapping in prelim test: 14927
Number of HSP's gapped (non-prelim): 512
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 61 (28.1 bits)