BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019661
MADHFIEIKIPQQRNYNNINNSCPFPSVLSPNPATTATVSRLAEKVRTQKPFLDSLLLKA
GSVLFRGFDDVKTAKEFNDVVEAFGYEELPYVGGAAPRTNIVGRVFTANESPPDQKIPFH
HEMAQVPEFPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRV
LGEKDDPSSPIGRGWKSTFLTEDKSIAEESSIESFNRAARLGMKLEWMEDGGVKTIMGPI
PAIKYDESRQRKIWFNSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIVHDCLNILEEES
VAIPWQKGDVLLIDNWAVLHARRSFNPPRRILASLCK

High Scoring Gene Products

Symbol, full name Information P value
AT3G21360 protein from Arabidopsis thaliana 1.0e-132

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019661
        (337 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2089423 - symbol:AT3G21360 species:3702 "Arabi...  1301  1.0e-132  1
ASPGD|ASPL0000041251 - symbol:AN2698 species:162425 "Emer...   314  3.9e-28   1


>TAIR|locus:2089423 [details] [associations]
            symbol:AT3G21360 species:3702 "Arabidopsis thaliana"
            [GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] InterPro:IPR003819 Pfam:PF02668 GO:GO:0005634
            EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0046872 GO:GO:0016491
            EMBL:AP001305 UniGene:At.47366 UniGene:At.63567 EMBL:AK117772
            IPI:IPI00537078 RefSeq:NP_188773.1 PDB:1Y0Z PDB:2Q4A PDBsum:1Y0Z
            PDBsum:2Q4A ProteinModelPortal:Q9LIG0 SMR:Q9LIG0 PaxDb:Q9LIG0
            PRIDE:Q9LIG0 DNASU:821690 EnsemblPlants:AT3G21360.1 GeneID:821690
            KEGG:ath:AT3G21360 TAIR:At3g21360 eggNOG:NOG13343
            HOGENOM:HOG000272702 InParanoid:Q9LIG0 OMA:TEYPAHQ PhylomeDB:Q9LIG0
            ProtClustDB:CLSN2685103 EvolutionaryTrace:Q9LIG0
            Genevestigator:Q9LIG0 GermOnline:AT3G21360 Uniprot:Q9LIG0
        Length = 330

 Score = 1301 (463.0 bits), Expect = 1.0e-132, P = 1.0e-132
 Identities = 244/337 (72%), Positives = 287/337 (85%)

Query:     6 IEIKIPQQRNYNNINNSCPFPSVLSPNPATTATVSRLA-----EKVRTQKPFLDSLLLKA 60
             +E  IPQQ++Y     S PFP+V+SP P+ +  +  L+     + ++TQK +LDSLL ++
Sbjct:     7 VETPIPQQKHYE----SKPFPAVISP-PSASIPIPALSLPLFTQTIKTQKHYLDSLLHES 61

Query:    61 GSVLFRGFDDVKTAKEFNDVVEAFGYEELPYVGGAAPRTNIVGRVFTANESPPDQKIPFH 120
             G+VLFRGF  V +A +FNDVVEAFG++ELPYVGGAAPRT++VGRVFTANESPPDQKIPFH
Sbjct:    62 GAVLFRGFP-VNSADDFNDVVEAFGFDELPYVGGAAPRTSVVGRVFTANESPPDQKIPFH 120

Query:   121 HEMAQVPEFPSKLFFFCEVEPGSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGLIYTRV 180
             HEMAQV EFPSKLFF+CE+EP  GGETPIVLSH+VYERMK K+P+FV++LE+HGL+Y RV
Sbjct:   121 HEMAQVREFPSKLFFYCEIEPKCGGETPIVLSHVVYERMKDKHPEFVQRLEEHGLLYVRV 180

Query:   181 LGEKDDPSSPIGRGWKSTFLTEDKSIAEESSIESFNRAARLGMKLEWMEDGGVKTIMGPI 240
             LGE DDPSSPIGRGWKSTFLT DK++AE+       RA  LGMKLEW EDGG KT+MGPI
Sbjct:   181 LGEDDDPSSPIGRGWKSTFLTHDKNLAEQ-------RAVDLGMKLEWTEDGGAKTVMGPI 233

Query:   241 PAIKYDESRQRKIWFNSMVAAYTGWKDDRNDPVKAVTFGNGKPLPADIVHDCLNILEEES 300
             PAIKYDESR RK+WFNSMVAAYTGW+D RNDP KAVTFG+GKPLPADIVHDCL ILEEE 
Sbjct:   234 PAIKYDESRNRKVWFNSMVAAYTGWEDKRNDPRKAVTFGDGKPLPADIVHDCLRILEEEC 293

Query:   301 VAIPWQKGDVLLIDNWAVLHARRSFNPPRRILASLCK 337
             VA+PWQ+GDVLLIDNWAVLH+RR F+PPRR+LASLCK
Sbjct:   294 VAVPWQRGDVLLIDNWAVLHSRRPFDPPRRVLASLCK 330


>ASPGD|ASPL0000041251 [details] [associations]
            symbol:AN2698 species:162425 "Emericella nidulans"
            [GO:0005575 "cellular_component" evidence=ND] [GO:0055114
            "oxidation-reduction process" evidence=IEA] [GO:0016491
            "oxidoreductase activity" evidence=IEA] InterPro:IPR003819
            Pfam:PF02668 GO:GO:0016491 EMBL:BN001306 EMBL:AACD01000047
            eggNOG:NOG13343 RefSeq:XP_660302.1 ProteinModelPortal:Q5B9T2
            EnsemblFungi:CADANIAT00010417 GeneID:2874296 KEGG:ani:AN2698.2
            HOGENOM:HOG000199867 OMA:YERRYNT OrthoDB:EOG4J14HW Uniprot:Q5B9T2
        Length = 401

 Score = 314 (115.6 bits), Expect = 3.9e-28, P = 3.9e-28
 Identities = 92/317 (29%), Positives = 146/317 (46%)

Query:    24 PFPSVLSPNPATTATVSRLAEKVRT--QKPFLDSLLLKAGSVLFRGFDDVKTAKEFNDVV 81
             P P  L P+ +   T++     V++  +   L SLL + G++LFRG   + +A +F+   
Sbjct:    48 PIPLALQPSGSIKPTLNLAIATVKSLQRTKILTSLLAQHGTLLFRGLP-IHSASDFSAFA 106

Query:    82 EAFGYEELPYVGGAAPRTNIVGRVFTANESPPDQKIPFHHEMAQVPEFPSKLFFFCEVEP 141
              AFGY     +G    R  +   V  ANE+P + +I  H+E  QVP  P  +FF+    P
Sbjct:   107 HAFGYSPHEIIGIVVDRPLLAPNVAPANEAPKEVRIYNHNESPQVPHAPEYVFFYANRAP 166

Query:   142 GSGGETPIVLSHIVYERMKHKYPDFVEQLEQHGL--IYTRVLGEKDDPSSPIGRGWKSTF 199
               GGETPI  S  ++ R + + P+F++ L + G+    T  +  +    S + + +   F
Sbjct:   167 KKGGETPISSSLELFHRARAEIPEFIDLLVEKGVKSSVTYTVERQYVGGSTLRQAFGKEF 226

Query:   200 LTEDKSIAEESSIESFNRAARLGM----KLEWME--DG-G-VKTIMGPIPAIKYDESRQR 251
             + ED   A+   +E+  + AR G       EW +  DG G V T+   +P I+       
Sbjct:   227 VDEDDEQAKRRKVEA--QIARYGRGKYTTFEWSDGADGQGQVLTLTHHLPVIRTQPGTNL 284

Query:   252 KIWFNSMVAAYTGWKDDRNDP------VKAVTFGNGKPLPADIVHDCLNILEEESVAIPW 305
                F  + A Y    + +         V   TFG+G P+P + +     I +E  V   W
Sbjct:   285 PTLFTGLAAYYKNSLEAKKGSGAGRKNVAVQTFGDGTPIPEEYLATLARITDEIRVLHRW 344

Query:   306 QKGDVLLIDNWAVLHAR 322
             Q GDVL+ DN    H R
Sbjct:   345 QDGDVLVFDNVIAQHGR 361


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.136   0.418    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      337       337   0.00093  116 3  11 22  0.41    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  2
  No. of states in DFA:  620 (66 KB)
  Total size of DFA:  253 KB (2135 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  28.21u 0.20s 28.41t   Elapsed:  00:00:02
  Total cpu time:  28.21u 0.20s 28.41t   Elapsed:  00:00:02
  Start:  Fri May 10 00:04:47 2013   End:  Fri May 10 00:04:49 2013

Back to top