Query 019662
Match_columns 337
No_of_seqs 267 out of 2470
Neff 7.9
Searched_HMMs 46136
Date Fri Mar 29 03:32:52 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019662.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019662hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG0484 DnaJ DnaJ-class molecu 100.0 5.6E-76 1.2E-80 552.0 33.1 289 1-336 2-349 (371)
2 PRK14288 chaperone protein Dna 100.0 4.6E-69 9.9E-74 517.6 34.1 289 1-336 1-344 (369)
3 PRK14296 chaperone protein Dna 100.0 1.4E-68 3.1E-73 514.3 33.8 294 1-336 1-360 (372)
4 PRK14286 chaperone protein Dna 100.0 1.5E-66 3.2E-71 500.7 34.3 296 1-336 2-356 (372)
5 PTZ00037 DnaJ_C chaperone prot 100.0 5E-67 1.1E-71 508.4 31.0 274 2-336 27-365 (421)
6 PRK14285 chaperone protein Dna 100.0 9.5E-66 2.1E-70 493.9 34.1 293 1-336 1-352 (365)
7 PRK14278 chaperone protein Dna 100.0 3.5E-65 7.6E-70 492.1 34.7 288 1-336 1-349 (378)
8 PRK14279 chaperone protein Dna 100.0 5.3E-65 1.1E-69 492.7 33.7 310 1-336 7-377 (392)
9 PRK14277 chaperone protein Dna 100.0 8.1E-65 1.8E-69 491.1 34.8 299 2-336 4-364 (386)
10 PRK14276 chaperone protein Dna 100.0 8.2E-65 1.8E-69 490.2 33.3 293 1-336 2-355 (380)
11 PRK14280 chaperone protein Dna 100.0 1.7E-64 3.6E-69 487.4 34.3 290 1-336 1-352 (376)
12 PRK14297 chaperone protein Dna 100.0 1.3E-64 2.9E-69 488.9 33.7 293 2-336 3-357 (380)
13 PRK14287 chaperone protein Dna 100.0 2.1E-64 4.6E-69 485.6 33.8 285 1-336 2-347 (371)
14 PRK14298 chaperone protein Dna 100.0 2.1E-64 4.6E-69 486.2 33.7 286 2-336 4-350 (377)
15 PRK14295 chaperone protein Dna 100.0 3.1E-64 6.8E-69 486.8 33.4 303 1-336 7-371 (389)
16 PRK14301 chaperone protein Dna 100.0 3.5E-64 7.5E-69 484.4 33.0 290 2-336 3-349 (373)
17 PRK14281 chaperone protein Dna 100.0 8.4E-64 1.8E-68 485.3 35.3 307 1-336 1-371 (397)
18 PRK14282 chaperone protein Dna 100.0 8.2E-64 1.8E-68 481.7 34.6 300 1-336 2-362 (369)
19 PRK14284 chaperone protein Dna 100.0 7.3E-64 1.6E-68 485.2 33.5 302 3-336 1-365 (391)
20 PRK14294 chaperone protein Dna 100.0 1.2E-63 2.6E-68 480.1 33.4 291 1-336 1-349 (366)
21 PRK14291 chaperone protein Dna 100.0 2.2E-63 4.8E-68 480.5 33.8 305 1-336 1-369 (382)
22 PRK14299 chaperone protein Dna 100.0 7.2E-63 1.6E-67 461.0 34.1 282 2-336 3-285 (291)
23 PRK14290 chaperone protein Dna 100.0 1.5E-62 3.2E-67 472.4 34.2 296 1-336 1-355 (365)
24 PRK14300 chaperone protein Dna 100.0 1.8E-62 3.9E-67 472.6 32.4 294 1-336 1-351 (372)
25 PRK10767 chaperone protein Dna 100.0 2.2E-62 4.8E-67 472.6 32.9 288 2-336 3-347 (371)
26 TIGR02349 DnaJ_bact chaperone 100.0 1.3E-61 2.7E-66 465.1 33.2 291 4-336 1-352 (354)
27 PRK10266 curved DNA-binding pr 100.0 6.7E-61 1.5E-65 450.9 34.1 289 1-336 2-292 (306)
28 PRK14283 chaperone protein Dna 100.0 2.5E-61 5.4E-66 465.9 31.1 291 2-336 4-355 (378)
29 PRK14293 chaperone protein Dna 100.0 4.4E-61 9.5E-66 463.6 32.2 292 1-336 1-353 (374)
30 PRK14292 chaperone protein Dna 100.0 2.4E-60 5.1E-65 458.5 33.3 285 2-335 1-346 (371)
31 PRK14289 chaperone protein Dna 100.0 1.3E-59 2.8E-64 455.4 34.4 296 2-336 4-363 (386)
32 KOG0712 Molecular chaperone (D 100.0 5.7E-58 1.2E-62 424.8 23.7 271 2-335 3-337 (337)
33 TIGR03835 termin_org_DnaJ term 100.0 4E-42 8.7E-47 342.1 30.0 154 164-321 661-816 (871)
34 KOG0713 Molecular chaperone (D 100.0 1.4E-43 3E-48 324.9 10.3 278 2-325 15-328 (336)
35 KOG0715 Molecular chaperone (D 100.0 2.1E-28 4.6E-33 227.2 14.6 218 4-261 44-288 (288)
36 KOG0714 Molecular chaperone (D 100.0 3.2E-27 7E-32 220.0 21.1 294 1-301 1-305 (306)
37 PF01556 CTDII: DnaJ C termina 99.9 1.5E-22 3.2E-27 153.8 8.8 81 250-330 1-81 (81)
38 KOG0716 Molecular chaperone (D 99.8 7.5E-21 1.6E-25 169.9 5.0 72 3-75 31-102 (279)
39 COG2214 CbpA DnaJ-class molecu 99.8 1.6E-18 3.5E-23 154.5 18.1 225 1-259 4-232 (237)
40 KOG0717 Molecular chaperone (D 99.8 4.1E-20 9E-25 175.3 7.1 78 1-78 6-83 (508)
41 KOG0691 Molecular chaperone (D 99.8 6.8E-20 1.5E-24 169.1 7.1 93 2-116 4-96 (296)
42 KOG0718 Molecular chaperone (D 99.8 7.4E-20 1.6E-24 173.6 5.8 73 3-75 9-83 (546)
43 PTZ00341 Ring-infected erythro 99.8 1.6E-19 3.5E-24 184.9 8.4 73 2-76 572-644 (1136)
44 PF00226 DnaJ: DnaJ domain; I 99.8 8.4E-19 1.8E-23 127.0 5.9 64 4-67 1-64 (64)
45 KOG0719 Molecular chaperone (D 99.7 1.7E-18 3.6E-23 151.4 6.1 72 1-72 12-84 (264)
46 KOG0624 dsRNA-activated protei 99.7 1.6E-17 3.5E-22 153.2 7.8 72 3-75 394-467 (504)
47 PHA03102 Small T antigen; Revi 99.7 2.4E-17 5.1E-22 138.5 7.2 85 3-114 5-91 (153)
48 smart00271 DnaJ DnaJ molecular 99.7 9E-17 2E-21 114.7 6.5 59 3-61 1-59 (60)
49 KOG0721 Molecular chaperone (D 99.7 1.6E-16 3.4E-21 137.9 6.9 70 3-73 99-168 (230)
50 cd06257 DnaJ DnaJ domain or J- 99.6 3.8E-16 8.2E-21 109.4 6.6 55 4-59 1-55 (55)
51 PRK01356 hscB co-chaperone Hsc 99.5 1E-14 2.2E-19 125.2 7.3 67 2-68 1-71 (166)
52 KOG0550 Molecular chaperone (D 99.5 1.1E-14 2.4E-19 137.4 7.3 66 3-68 373-438 (486)
53 PRK05014 hscB co-chaperone Hsc 99.5 1.4E-14 3.1E-19 125.0 7.2 66 3-68 1-72 (171)
54 KOG0722 Molecular chaperone (D 99.5 1.7E-14 3.8E-19 127.6 3.4 65 3-69 33-97 (329)
55 PRK03578 hscB co-chaperone Hsc 99.5 1.1E-13 2.3E-18 119.9 7.3 67 2-68 5-77 (176)
56 PRK00294 hscB co-chaperone Hsc 99.4 1.8E-13 3.8E-18 118.1 7.6 67 2-68 3-75 (173)
57 KOG0720 Molecular chaperone (D 99.3 7.3E-13 1.6E-17 126.4 5.5 65 2-68 234-298 (490)
58 PTZ00100 DnaJ chaperone protei 99.3 9.6E-13 2.1E-17 105.1 5.2 51 3-58 65-115 (116)
59 PRK09430 djlA Dna-J like membr 99.3 2.2E-12 4.9E-17 119.1 4.9 57 3-59 200-262 (267)
60 PHA02624 large T antigen; Prov 99.3 5E-12 1.1E-16 126.3 5.4 59 3-66 11-71 (647)
61 PF01556 CTDII: DnaJ C termina 99.2 7.9E-12 1.7E-16 94.8 4.1 75 161-247 1-77 (81)
62 COG5407 SEC63 Preprotein trans 99.2 9.8E-12 2.1E-16 118.2 5.5 72 3-74 98-173 (610)
63 PRK14282 chaperone protein Dna 99.2 4.1E-11 9E-16 115.9 7.3 86 157-254 273-359 (369)
64 PRK01773 hscB co-chaperone Hsc 99.1 9.8E-11 2.1E-15 101.1 7.4 67 2-68 1-73 (173)
65 PRK14294 chaperone protein Dna 99.1 1.7E-10 3.6E-15 111.6 7.2 87 156-255 260-347 (366)
66 PRK14299 chaperone protein Dna 99.1 1.3E-10 2.8E-15 108.9 6.2 86 156-254 197-282 (291)
67 PRK14285 chaperone protein Dna 99.1 1.9E-10 4.1E-15 111.1 6.9 86 157-254 263-349 (365)
68 PRK14290 chaperone protein Dna 99.1 2E-10 4.4E-15 110.9 7.1 86 157-255 267-353 (365)
69 TIGR00714 hscB Fe-S protein as 99.1 3.5E-10 7.6E-15 96.4 7.0 55 14-68 2-60 (157)
70 PRK10767 chaperone protein Dna 99.0 3.7E-10 8E-15 109.4 6.8 86 157-255 259-345 (371)
71 PRK14298 chaperone protein Dna 99.0 3.4E-10 7.4E-15 109.7 6.5 86 157-255 262-348 (377)
72 PRK14284 chaperone protein Dna 99.0 5E-10 1.1E-14 109.2 7.5 87 156-254 274-362 (391)
73 PRK14279 chaperone protein Dna 99.0 6.2E-10 1.3E-14 108.5 7.2 84 156-252 289-372 (392)
74 PRK14287 chaperone protein Dna 99.0 5.7E-10 1.2E-14 108.0 6.7 85 157-254 259-344 (371)
75 PRK14301 chaperone protein Dna 99.0 7E-10 1.5E-14 107.5 7.1 86 156-254 260-346 (373)
76 PRK14288 chaperone protein Dna 99.0 7.1E-10 1.5E-14 107.3 6.9 85 156-252 254-339 (369)
77 TIGR02349 DnaJ_bact chaperone 99.0 8E-10 1.7E-14 106.5 7.1 83 157-252 264-347 (354)
78 PRK14300 chaperone protein Dna 99.0 8.4E-10 1.8E-14 106.9 7.2 84 157-252 262-346 (372)
79 PRK14295 chaperone protein Dna 99.0 8.5E-10 1.8E-14 107.4 7.1 85 157-253 283-367 (389)
80 KOG1150 Predicted molecular ch 98.9 1.1E-09 2.3E-14 94.2 5.7 64 2-65 52-115 (250)
81 COG0484 DnaJ DnaJ-class molecu 98.9 1.2E-09 2.7E-14 103.8 6.4 85 157-254 261-346 (371)
82 PRK14286 chaperone protein Dna 98.9 1.6E-09 3.4E-14 105.0 7.1 85 157-253 267-352 (372)
83 PRK14293 chaperone protein Dna 98.9 1.4E-09 2.9E-14 105.6 6.0 87 156-255 263-351 (374)
84 PRK10266 curved DNA-binding pr 98.9 1.8E-09 3.8E-14 102.1 6.5 82 156-251 205-286 (306)
85 PRK14276 chaperone protein Dna 98.9 2E-09 4.3E-14 104.6 6.8 84 156-252 266-350 (380)
86 PRK14280 chaperone protein Dna 98.9 2.5E-09 5.5E-14 103.7 7.0 83 157-252 264-347 (376)
87 PRK14281 chaperone protein Dna 98.9 2.6E-09 5.6E-14 104.4 6.9 83 157-252 283-366 (397)
88 PRK14291 chaperone protein Dna 98.9 6.8E-09 1.5E-13 101.0 9.2 75 156-242 271-346 (382)
89 PRK14297 chaperone protein Dna 98.9 3.5E-09 7.5E-14 103.0 6.7 83 157-252 269-352 (380)
90 PRK14278 chaperone protein Dna 98.9 4.9E-09 1.1E-13 101.8 7.3 85 156-252 259-344 (378)
91 PRK14296 chaperone protein Dna 98.8 4.8E-09 1E-13 101.6 6.5 83 157-252 270-355 (372)
92 PRK14292 chaperone protein Dna 98.8 4.3E-09 9.2E-14 102.1 6.2 85 156-253 258-343 (371)
93 PRK14277 chaperone protein Dna 98.8 6E-09 1.3E-13 101.5 6.9 83 157-252 276-359 (386)
94 PTZ00037 DnaJ_C chaperone prot 98.8 6.6E-09 1.4E-13 101.9 6.3 85 156-252 270-360 (421)
95 PRK14283 chaperone protein Dna 98.8 9E-09 2E-13 100.0 7.0 84 157-253 267-351 (378)
96 COG5269 ZUO1 Ribosome-associat 98.8 1.5E-08 3.2E-13 91.1 6.6 68 3-70 43-114 (379)
97 PRK14289 chaperone protein Dna 98.7 1.6E-08 3.4E-13 98.6 6.6 82 156-250 274-356 (386)
98 TIGR03835 termin_org_DnaJ term 98.6 5.4E-08 1.2E-12 99.1 7.4 69 3-73 2-70 (871)
99 KOG1789 Endocytosis protein RM 98.5 1.8E-07 3.9E-12 97.1 5.4 51 4-58 1282-1336(2235)
100 KOG0568 Molecular chaperone (D 98.4 1.5E-07 3.2E-12 82.9 3.5 54 4-59 48-102 (342)
101 KOG0723 Molecular chaperone (D 98.0 9E-06 1.9E-10 63.2 4.7 49 7-60 60-108 (112)
102 KOG0712 Molecular chaperone (D 97.7 0.0001 2.3E-09 69.6 7.3 74 157-242 249-324 (337)
103 KOG3192 Mitochondrial J-type c 97.0 0.00072 1.6E-08 56.4 4.0 66 3-68 8-79 (168)
104 COG1076 DjlA DnaJ-domain-conta 96.4 0.002 4.4E-08 55.8 2.2 55 3-57 113-173 (174)
105 COG1076 DjlA DnaJ-domain-conta 96.1 0.0043 9.2E-08 53.8 3.0 65 4-68 2-72 (174)
106 KOG0431 Auxilin-like protein a 94.5 0.051 1.1E-06 54.1 4.9 47 10-56 395-447 (453)
107 PF03656 Pam16: Pam16; InterP 91.9 0.32 7E-06 39.8 4.9 52 6-62 61-112 (127)
108 PF13446 RPT: A repeated domai 88.6 1.1 2.3E-05 31.7 4.7 26 4-29 6-31 (62)
109 TIGR02642 phage_xxxx uncharact 86.2 0.5 1.1E-05 41.3 2.2 46 171-218 102-149 (186)
110 KOG0724 Zuotin and related mol 83.7 1 2.2E-05 43.1 3.3 55 14-68 3-60 (335)
111 PF11833 DUF3353: Protein of u 80.2 3.5 7.6E-05 36.4 5.1 39 12-59 1-40 (194)
112 PF14687 DUF4460: Domain of un 80.0 3 6.6E-05 33.4 4.2 47 13-59 4-53 (112)
113 COG5552 Uncharacterized conser 74.2 14 0.00031 27.1 5.8 38 1-38 1-38 (88)
114 PF10041 DUF2277: Uncharacteri 58.6 46 0.00099 24.6 5.9 56 1-58 1-60 (78)
115 PF07709 SRR: Seven Residue Re 55.1 7.6 0.00016 19.0 1.0 13 46-58 2-14 (14)
116 PF12991 DUF3875: Domain of un 53.9 16 0.00034 25.1 2.7 25 307-331 26-52 (54)
117 PF12434 Malate_DH: Malate deh 43.0 28 0.00061 20.3 2.2 17 17-33 10-26 (28)
118 COG2214 CbpA DnaJ-class molecu 35.9 1.1E+02 0.0024 26.0 6.3 71 250-323 150-220 (237)
119 KOG0315 G-protein beta subunit 34.0 29 0.00064 31.9 2.1 29 254-282 19-48 (311)
120 PF07739 TipAS: TipAS antibiot 33.1 1.1E+02 0.0025 23.7 5.3 52 10-71 51-104 (118)
121 PF06675 DUF1177: Protein of u 31.2 1.4E+02 0.0029 27.5 5.8 90 228-319 79-179 (276)
122 cd00084 HMG-box High Mobility 30.9 1.3E+02 0.0028 20.3 4.8 42 21-68 12-53 (66)
123 PF01846 FF: FF domain; Inter 30.7 54 0.0012 21.6 2.6 48 19-69 1-51 (51)
124 smart00276 GLECT Galectin. Gal 30.1 64 0.0014 26.0 3.4 40 202-241 2-48 (128)
125 PF09285 Elong-fact-P_C: Elong 29.5 77 0.0017 22.0 3.2 20 201-220 30-49 (56)
126 PRK14051 negative regulator Gr 29.1 2.7E+02 0.0058 22.1 6.4 71 229-301 47-119 (123)
127 smart00841 Elong-fact-P_C Elon 28.3 78 0.0017 22.0 3.0 20 201-220 30-49 (56)
128 COG5435 Uncharacterized conser 28.3 90 0.0019 26.2 3.9 31 307-337 108-138 (147)
129 KOG0715 Molecular chaperone (D 27.5 67 0.0014 30.1 3.5 141 158-330 136-278 (288)
130 cd01388 SOX-TCF_HMG-box SOX-TC 27.3 1.1E+02 0.0023 21.9 3.8 41 22-68 14-54 (72)
131 cd05794 S1_EF-P_repeat_2 S1_EF 25.2 94 0.002 21.6 3.0 20 201-220 30-49 (56)
132 cd02639 R3H_RRM R3H domain of 25.0 93 0.002 21.9 3.0 21 314-334 17-37 (60)
133 PF12791 RsgI_N: Anti-sigma fa 24.8 1.9E+02 0.0042 19.4 4.6 36 264-299 4-39 (56)
134 cd01390 HMGB-UBF_HMG-box HMGB- 24.7 1.8E+02 0.0039 19.8 4.6 40 24-69 15-54 (66)
135 cd01389 MATA_HMG-box MATA_HMG- 24.4 1.3E+02 0.0027 21.8 3.8 42 21-68 13-54 (77)
136 COG2879 Uncharacterized small 24.2 1.4E+02 0.003 21.3 3.6 16 24-39 28-43 (65)
137 cd05792 S1_eIF1AD_like S1_eIF1 22.9 2.7E+02 0.0058 20.7 5.2 22 263-284 9-31 (78)
138 smart00441 FF Contains two con 22.7 2.4E+02 0.0051 18.6 4.8 49 19-69 2-52 (55)
139 smart00276 GLECT Galectin. Gal 22.3 1.3E+02 0.0029 24.1 3.9 42 280-321 3-49 (128)
No 1
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.6e-76 Score=551.97 Aligned_cols=289 Identities=37% Similarity=0.669 Sum_probs=250.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|.+|||+||||+++||.+|||+|||+||+|||||+||.+ ++|+++|++|++||||||||+||++||+||+++++++.
T Consensus 2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~-~~AeeKFKEI~eAYEVLsD~eKRa~YD~fG~~~~~~gg-- 78 (371)
T COG0484 2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGD-KEAEEKFKEINEAYEVLSDPEKRAAYDQFGHAGFKAGG-- 78 (371)
T ss_pred CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhCCHHHHHHhhccCccccccCC--
Confidence 579999999999999999999999999999999999965 68999999999999999999999999999999987321
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
+++| +++ +|.+ ++.|||++|||++.++ . ++...++++.
T Consensus 79 ----~gg~---g~~--~fgg-~~~DIF~~~FgGg~~~--~------------------------------~~~~~~~rG~ 116 (371)
T COG0484 79 ----FGGF---GFG--GFGG-DFGDIFEDFFGGGGGG--R------------------------------RRPNRPRRGA 116 (371)
T ss_pred ----cCCC---CcC--CCCC-CHHHHHHHhhcCCCcc--c------------------------------CCCCCcccCC
Confidence 1111 111 2322 7899999999732110 0 0022467899
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----cCC-----------------Ce--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----DAN-----------------GR-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~-----------------G~-------------------------- 193 (337)
|+.+.++|||+||+.|+++.|.+.+... +|+ |.
T Consensus 117 Dl~~~l~isleEa~~G~~~~i~~~~~~~C~~C~GsGak~gt~~~tC~tC~G~G~v~~~~~~g~~~~~~~C~~C~G~G~~i 196 (371)
T COG0484 117 DLRYNLEITLEEAVFGVKKEIRVTRSVTCSTCHGSGAKPGTDPKTCPTCNGSGQVRTVQRTGFFSFQQTCPTCNGTGKII 196 (371)
T ss_pred ceEEEEEeEhhhhccCceeeEecceeeECCcCCCCCCCCCCCCCcCCCCCCcCeEEEEEeeeEEEEEEECCCCccceeEC
Confidence 9999999999999999999998876532 222 10
Q ss_pred -----------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662 194 -----------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE 261 (337)
Q Consensus 194 -----------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e 261 (337)
.+.+.++++|+||||+.+|++|+++|+|++++ ++++|||||+|.|++|+.|.|+|+||+++++||+.+
T Consensus 197 ~~pC~~C~G~G~v~~~~~i~V~IPaGv~~g~~ir~~g~G~~g~~Ggp~GDLyv~i~v~~h~~F~R~g~dL~~~~~Is~~~ 276 (371)
T COG0484 197 KDPCGKCKGKGRVKKKKSISVNIPAGVDDGDRIRLSGEGEAGPNGGPAGDLYVFVHVKPHPIFERDGDDLYCEVPISFTE 276 (371)
T ss_pred CCCCCCCCCCCeEeeeeEEEEECCCCCccCCEEEEecCcccCCCCCCCccEEEEEEeecCCCeEECCCceEeccccCHHH
Confidence 57788999999999999999999999999986 667899999999999999999999999999999999
Q ss_pred HhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 262 Al~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|++|+++.|+||+|+ ++|+||+++++|+++||+|+|||..+ +..+|||||+|+|++|++|+.+|+++|+++..
T Consensus 277 AalG~~i~vptl~g~-~~l~ip~Gtq~G~~~rl~gkG~p~~~-~~~~GDl~v~v~v~~P~~ls~~q~~lL~~~~~ 349 (371)
T COG0484 277 AALGGEIEVPTLDGR-VKLKIPAGTQTGEVFRLRGKGMPKLR-SGGRGDLYVRVKVETPKNLSDEQKELLEEFAK 349 (371)
T ss_pred HhcCCEEEEEecCCC-EEEecCCCCccCcEEEEcCCCccccC-CCCcCCEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 999999999999998 99999999999999999999999876 45679999999999999999999999999875
No 2
>PRK14288 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.6e-69 Score=517.55 Aligned_cols=289 Identities=30% Similarity=0.509 Sum_probs=242.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|++|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.||++||+||++++..+.
T Consensus 1 ~~~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~-~~a~~~f~~i~~AYevLsd~~kR~~YD~~G~~~~~~~~-- 77 (369)
T PRK14288 1 MELSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGD-KEAEEKFKLINEAYGVLSDEKKRALYDRYGKKGLNQAG-- 77 (369)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-cHHHHHHHHHHHHHHHhccHHHHHHHHHhcccccccCC--
Confidence 889999999999999999999999999999999999865 46899999999999999999999999999998765311
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
+ +.++|. . .| .++.++|+.|||++ +. + . . ...++++.
T Consensus 78 -~-~~~~~~-----~-~f--~~~~~~F~~~fg~g-----~~---------------------~-~---~---~~~~~~g~ 114 (369)
T PRK14288 78 -A-SQSDFS-----D-FF--EDLGSFFEDAFGFG-----AR---------------------G-S---K---RQKSSIAP 114 (369)
T ss_pred -C-Cccccc-----c-ch--hhHHHHHHhhcCCC-----Cc---------------------c-c---C---cCCCCCCC
Confidence 0 000010 0 01 13445666666521 00 0 0 0 11235688
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----cCC--------------------------------------C------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----DAN--------------------------------------G------ 192 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~--------------------------------------G------ 192 (337)
|+.+.+.|||+|+|+|+++++.+.+.+. +|+ |
T Consensus 115 di~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~ 194 (369)
T PRK14288 115 DYLQTIELSFKEAVFGCKKTIKVQYQSVCESCDGTGAKDKALETCKQCNGQGQVFMRQGFMSFAQTCGACQGKGKIIKTP 194 (369)
T ss_pred CeeEeccccHHHHhCCeEEEEEEEeeccCCCCCCcccCCCCCcCCCCCCCCcEEEEEeceEEEEEecCCCCCCceEcccc
Confidence 9999999999999999999998875421 111 1
Q ss_pred -------eeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhCC
Q 019662 193 -------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGG 265 (337)
Q Consensus 193 -------~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~G 265 (337)
.++.+.++++|.||||+++|++|+|+|+|++.+++.+|||+|+|++++|+.|+|+|+||+++++|||.|||+|
T Consensus 195 C~~C~G~g~v~~~~~l~V~IP~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~h~~f~R~G~DL~~~~~Isl~eAllG 274 (369)
T PRK14288 195 CQACKGKTYILKDEEIDAIIPEGIDDQNRMVLKNKGNEYEKGKRGDLYLEARVKEDEHFKREGCDLFIEAPVFFTTIALG 274 (369)
T ss_pred CccCCCcceEEEEEEEEEecCCCCCCCCEEEEccCccCCCCCCCCCEEEEEEEEECCCcEEeCCEEEEEEecCHHHHhcC
Confidence 1456678999999999999999999999999888889999999999999999999999999999999999999
Q ss_pred cEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 266 TSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 266 ~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
+++.|+||||+.++|+||+++++|++++|+|+|||..+ +..+|||||+|+|.+|+.|+++|+++|+++|+
T Consensus 275 ~~i~v~tLdG~~l~i~i~~~~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~ 344 (369)
T PRK14288 275 HTIKVPSLKGDELELKIPRNARDRQTFAFRNEGVKHPE-SSYRGSLIVELQVIYPKSLNKEQQELLEKLHA 344 (369)
T ss_pred CEEEeecCCCCEEEEEeCCCCCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999998899999999999999999999999765 34689999999999999999999999999984
No 3
>PRK14296 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.4e-68 Score=514.31 Aligned_cols=294 Identities=27% Similarity=0.452 Sum_probs=240.6
Q ss_pred CC-CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCC
Q 019662 1 MG-MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPP 79 (337)
Q Consensus 1 m~-~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 79 (337)
|. +|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||+|||||+||+.||+||++++..+..
T Consensus 1 m~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~--~~a~~~F~~i~~AyevLsD~~KR~~YD~~G~~~~~~~~~ 78 (372)
T PRK14296 1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKS--PDAHDKMVEINEAADVLLDKDKRKQYDQFGHAAFDGSSG 78 (372)
T ss_pred CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--chHHHHHHHHHHHHHHhcCHHHhhhhhhccchhhcCCCC
Confidence 63 799999999999999999999999999999999985 468999999999999999999999999999987753210
Q ss_pred CCCCCCCCCCCCCCCCC---CCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCC
Q 019662 80 SSSSGYSYANGSGGNSK---GFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVP 156 (337)
Q Consensus 80 ~~~~~~~~~~~~~~~~~---~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (337)
. ++++++|.. .+..+ .| .++.|+|++|||++. . . ...+
T Consensus 79 ~-~~~~~~~~~-~~~~~~~~g~--~~f~d~f~~~fggg~----~----------------------~---------~~~~ 119 (372)
T PRK14296 79 F-SSNFGDFED-LFSNMGSSGF--SSFTNIFSDFFGSNK----S----------------------D---------YQRS 119 (372)
T ss_pred c-CcCCCcccc-cccccccccc--ccchhhhhhhcCCCc----c----------------------C---------CCCc
Confidence 0 011111110 00000 11 245678888876310 0 0 0123
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEE---------------------cCCCe----------------------
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVV---------------------DANGR---------------------- 193 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~---------------------~g~G~---------------------- 193 (337)
+++.|+.+.+.|||+|+|+|++++|.+.+.+. +|.|.
T Consensus 120 ~~g~di~~~l~ltlee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~ 199 (372)
T PRK14296 120 TKGQSVSLDIYLTFKELLFGVDKIIELDLLTNCSKCFGSGAESNSDIHICNNCHGTGEVLVQKNMGFFQFQQSAKCNVCN 199 (372)
T ss_pred CCCCCeEEEeeccHHHhhCCeeEEEEEeeeeccCCCCCCccCCCCCCccCCCCCCCceEEEEEeccceEEEEEecCCCcC
Confidence 56889999999999999999999998865421 11111
Q ss_pred -----------------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccC-CCceEEE
Q 019662 194 -----------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRD-SNDLIVN 254 (337)
Q Consensus 194 -----------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~-g~dL~~~ 254 (337)
++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+ |+||+++
T Consensus 200 G~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~v~v~~h~~F~R~~G~DL~~~ 279 (372)
T PRK14296 200 GAGKIIKNKCKNCKGKGKYLERKKIEVNIPKGIRPNQQIKLSQKGHASLNNGVNGDLIIDIYLKESKVFEIINNNDILMT 279 (372)
T ss_pred CcceeecccccCCCCceEEEEEEEEEEEECCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEeCCCCEEEeCCCcEEEE
Confidence 2455679999999999999999999999987 56779999999999999999995 8999999
Q ss_pred EeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHH
Q 019662 255 HKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRA 334 (337)
Q Consensus 255 ~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~ 334 (337)
++|||+|||+|+++.|+||||+ ++|+||+++++|++++|+|+|||...+++.+|||||+|+|.||+.|+++|+++|+++
T Consensus 280 ~~Isl~eAllG~~~~i~tldG~-~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~V~~~V~~P~~Ls~~q~~~l~~l 358 (372)
T PRK14296 280 YNISYLDAILGNEIIIKTLDGD-IKYKLPKSINSNELIIINNKGLYKSINKDKRGDLIIKVNIVVPKNLSKKEKELIEQI 358 (372)
T ss_pred EecCHHHHhCCCEEEeeCCCCC-EEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHH
Confidence 9999999999999999999998 999999999999999999999996544457899999999999999999999999998
Q ss_pred hC
Q 019662 335 LG 336 (337)
Q Consensus 335 l~ 336 (337)
+.
T Consensus 359 ~~ 360 (372)
T PRK14296 359 YE 360 (372)
T ss_pred Hh
Confidence 74
No 4
>PRK14286 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-66 Score=500.71 Aligned_cols=296 Identities=33% Similarity=0.594 Sum_probs=244.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
-.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|++||+||++++..+..
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~- 79 (372)
T PRK14286 2 SERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGN-KESEEKFKEATEAYEILRDPKKRQAYDQFGKAGVNAGAG- 79 (372)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHHhCchhhccccC-
Confidence 048999999999999999999999999999999999865 468999999999999999999999999999988753211
Q ss_pred CCCCCCCCCCCCCCCCC--CCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKG--FNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRK 158 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~--~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (337)
+.+.++++ ++. | .++.|+|++|||++. + +. . ..+ ....+++
T Consensus 80 -~~~~~~~~-----~~~~~~--~~~~d~f~~ffgg~~-~--~~----------------~----~~~------~~~~~~~ 122 (372)
T PRK14286 80 -GFGQGAYT-----DFSDIF--GDFGDIFGDFFGGGR-G--GG----------------S----GGG------RRSGPQR 122 (372)
T ss_pred -CCCCCCcc-----cccccc--cchhhHHHHhhCCCc-c--CC----------------C----ccc------ccCCCCC
Confidence 00000010 111 2 257799999997411 0 00 0 000 0112357
Q ss_pred CCCeeeeeeechhhheeCceEEEEEEEEEE----cCCC---------------------------------------e--
Q 019662 159 PPPVESKLPCSLEELYSGSTRKMKISRTVV----DANG---------------------------------------R-- 193 (337)
Q Consensus 159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G---------------------------------------~-- 193 (337)
+.|+.+.+.|||+|+|+|+++++.+.+.+. +|+| +
T Consensus 123 g~di~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~ 202 (372)
T PRK14286 123 GSDLRYNLEVSLEDAALGREYKIEIPRLESCVDCNGSGASKGSSPTTCPDCGGSGQIRRTQGFFSVATTCPTCRGKGTVI 202 (372)
T ss_pred CCCeeEEEEEEHHHHhCCeeEEEEeeccccCCCCcCCCcCCCCCCccCCCCcCeEEEEEEeceEEEEEeCCCCCceeeEe
Confidence 899999999999999999999998875431 1111 0
Q ss_pred -----------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662 194 -----------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE 261 (337)
Q Consensus 194 -----------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e 261 (337)
++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||||+|++++|+.|+|+|+||+++++|||++
T Consensus 203 ~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~e 282 (372)
T PRK14286 203 SNPCKTCGGQGLQEKRRTINIKIPPGVETGSRLKVSGEGEAGPNGGPHGDLYVVTHIKKHELFERQGNDLILVRKISLAQ 282 (372)
T ss_pred cccCCCCCCCcEEecceEEEEEECCCCCCCCEEEECCccccCCCCCCCceEEEEEEEccCCCEEEecCCEEEEEEECHHH
Confidence 345668999999999999999999999999764 56799999999999999999999999999999999
Q ss_pred HhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 262 Al~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|++|+++.|+||||++++|+||+++++|+++||+|+|||..+ ...+|||||+|+|.||+.|+++|+++|+++|.
T Consensus 283 Al~G~~~~i~tldG~~i~v~ip~g~~~g~~~ri~G~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~ 356 (372)
T PRK14286 283 AILGAEIEVPTIDGKKAKMKIPEGTESGQVFRLKGHGMPYLG-AYGKGDQHVIVKIEIPKKITRRQRELIEEFAR 356 (372)
T ss_pred HhCCCEEEEeCCCCCEEEEEeCCccCCCcEEEECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 999999999999999899999999999999999999999765 34689999999999999999999999999984
No 5
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=100.00 E-value=5e-67 Score=508.40 Aligned_cols=274 Identities=40% Similarity=0.721 Sum_probs=238.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||+||||+++||.+|||+|||+||++||||+|++ .++|++|++||+|||||.||+.||+||++++.++
T Consensus 27 ~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~-----~e~F~~i~~AYevLsD~~kR~~YD~~G~~~~~~~---- 97 (421)
T PTZ00037 27 NEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGD-----PEKFKEISRAYEVLSDPEKRKIYDEYGEEGLEGG---- 97 (421)
T ss_pred chhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCch-----HHHHHHHHHHHHHhccHHHHHHHhhhcchhcccC----
Confidence 4799999999999999999999999999999999963 4899999999999999999999999998876421
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 161 (337)
. + +.++.|+|+.|||++. . ...++++.|
T Consensus 98 ~--------~--------~~d~~d~f~~~Fggg~-----~-------------------------------~~~~~rg~d 125 (421)
T PTZ00037 98 E--------Q--------PADASDLFDLIFGGGR-----K-------------------------------PGGKKRGED 125 (421)
T ss_pred C--------C--------CcchhhhHHHhhcccc-----c-------------------------------cccccCCCC
Confidence 0 0 0256789999987310 0 011346889
Q ss_pred eeeeeeechhhheeCceEEEEEEEEEE--------------------cCCC--------------------------e--
Q 019662 162 VESKLPCSLEELYSGSTRKMKISRTVV--------------------DANG--------------------------R-- 193 (337)
Q Consensus 162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~--------------------~g~G--------------------------~-- 193 (337)
+.+.|.|||+|+|+|+++++.+.+.+. +|.| +
T Consensus 126 i~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~g~~~~q~~~~C~~C~G~G~~i 205 (421)
T PTZ00037 126 IVSHLKVTLEQIYNGAMRKLAINKDVICANCEGHGGPKDAFVDCKLCNGQGIRVQIRQMGSMIHQTQSTCNSCNGQGKII 205 (421)
T ss_pred EEEEeeeeHHHHhCCCceEEEeeccccccccCCCCCCCCCCccCCCCCCCCeEEEEEeecceeeEEEEeCCCCCCcceec
Confidence 999999999999999999988864321 1111 1
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA 260 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~ 260 (337)
++.+.++++|.||||+.+|++|+|+|+|+..+++.+|||+|+|++++|+.|+|+|+||+++++|||+
T Consensus 206 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~dG~~I~~~G~Gd~~~~~~pGDLiv~I~~~ph~~F~R~G~DL~~~~~Isl~ 285 (421)
T PTZ00037 206 PESKKCKNCSGKGVKKTRKILEVNIDKGVPNQHKITFHGEADEKPNEIPGNVVFILNEKPHDTFKREGGDLFITKKISLY 285 (421)
T ss_pred cccccCCcCCCcceeeeeeEEEEeeCCCCCCCcEEEEecccCCCCCCCCCcEEEEEEecCCCCcEEeCCeEEEEEeCCHH
Confidence 2445688999999999999999999999998888999999999999999999999999999999999
Q ss_pred HHhCCcEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC--CCCCHHHHHHHHHHhC
Q 019662 261 EALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP--TKLTPEQRAGLKRALG 336 (337)
Q Consensus 261 eAl~G~~~~i~~l~g~~~~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P--~~l~~~~~~~l~~~l~ 336 (337)
|||+|+++.|+||||+.|.|+||++ +++|++++|+|+|||..++++.+|||||+|+|.|| +.|+++|+++|+++||
T Consensus 286 eAllG~~i~I~tLdG~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGDL~V~~~V~~P~~~~Ls~~qk~ll~~l~~ 365 (421)
T PTZ00037 286 EALTGFVFYITHLDGRKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGNLYVTFEVIFPVDRKFTNEEKEILKSLFP 365 (421)
T ss_pred HHhcCCEEEeeCCCCCeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCCEEEEEEEEcCCCCCCCHHHHHHHHHhcc
Confidence 9999999999999999899999976 99999999999999986644578999999999999 9999999999999997
No 6
>PRK14285 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=9.5e-66 Score=493.91 Aligned_cols=293 Identities=32% Similarity=0.523 Sum_probs=245.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|.+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|.++|++|++||+||+|+.+|+.||+||++++..+.
T Consensus 1 m~~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yd~~g~~~~~~~~-- 77 (365)
T PRK14285 1 MKRDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGN-KEAESIFKEATEAYEVLIDDNKRAQYDRFGHTAFEGGG-- 77 (365)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-HHHHHHHHHHHHHHHHHcCcchhHHHHhcCcchhccCC--
Confidence 789999999999999999999999999999999999875 47889999999999999999999999999998775321
Q ss_pred CCCCCCCCCCCCCCCC--CCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSK--GFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRK 158 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~--~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (337)
+++++.++ ++++ .| .++.|+|++|||++. + . .. ...+++
T Consensus 78 ---~~~~~~~g-~~~~~~~~--~~~~d~f~~~fgg~~-~---~--------------------~~---------~~~~~~ 118 (365)
T PRK14285 78 ---GFEGFSGG-FSGFSDIF--EDFGDIFDSFFTGNR-G---Q--------------------DK---------NRKHEK 118 (365)
T ss_pred ---CccccCCC-cccccccc--ccHHHHHHHhhcCCc-C---C--------------------CC---------CcCCCC
Confidence 11111100 0011 12 357899999997310 0 0 00 011356
Q ss_pred CCCeeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe------------------------
Q 019662 159 PPPVESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR------------------------ 193 (337)
Q Consensus 159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~------------------------ 193 (337)
+.|+.+.+.|||+|+|+|+++++.+.|.+. +| .|+
T Consensus 119 g~di~~~l~vtlee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~ 198 (365)
T PRK14285 119 GQDLTYQIEISLEDAYLGYKNNINITRNMLCESCLGKKSEKGTSPSICNMCNGSGRVMQGGGFFRVTTTCPKCYGNGKII 198 (365)
T ss_pred CCCEEEEEEEEHHHhhCCeEEEEEeeecccCCCCCCcccCCCCCCccCCCccCceeEEecCceeEEeeecCCCCCccccc
Confidence 889999999999999999999998876532 11 111
Q ss_pred -----------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662 194 -----------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE 261 (337)
Q Consensus 194 -----------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e 261 (337)
++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||+|+|++++|+.|+|+|+||+++++|||.|
T Consensus 199 ~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~dL~~~~~Isl~e 278 (365)
T PRK14285 199 SNPCKSCKGKGSLKKKETIELKIPAGIDDNQQIKMRGKGSVNPDNQQYGDLYIKILIKPHKIFKRNGKDLYATLPISFTQ 278 (365)
T ss_pred CCCCCCCCCCCEEeccEEEEEEECCCCCCCCEEEEeeccccCCCCCCCCCEEEEEEEecCCCeEEeccceEEEEecCHHH
Confidence 356678999999999999999999999999865 55899999999999999999999999999999999
Q ss_pred HhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 262 Al~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
||+|+++.|+||||++++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 279 Al~G~~~~i~tldG~~v~V~Ip~g~~~g~~irl~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~l~~ 352 (365)
T PRK14285 279 AALGKEIKIQTIASKKIKIKIPKGTENDEQIIIKNEGMPILH-TEKFGNLILIIKIKTPKNLNSNAIKLLENLSK 352 (365)
T ss_pred HhCCCEEEEECCCCCEEEEEeCCCcCCCcEEEECCCCccCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 999999999999998899999999999999999999999766 34679999999999999999999999999875
No 7
>PRK14278 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.5e-65 Score=492.08 Aligned_cols=288 Identities=34% Similarity=0.545 Sum_probs=241.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|.+|||+||||+++||.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||+||++...++
T Consensus 1 m~~d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~--~~a~~~f~~i~~Ay~vL~d~~~r~~YD~~G~~~~~~~--- 75 (378)
T PRK14278 1 MARDYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPD--EEAQEKFKEISVAYEVLSDPEKRRIVDLGGDPLESAG--- 75 (378)
T ss_pred CCCCcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCc--HHHHHHHHHHHHHHHHhchhhhhhhhhccCCcccccc---
Confidence 78999999999999999999999999999999999985 5789999999999999999999999999998633211
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
+. .++|+ ..| .++.|+|++|||++. + .. + . ...++++.
T Consensus 76 -~~-~~g~~------~~f--~~~~d~f~~ffgg~g-~--~~---------------------~-~-------~~~~~~g~ 113 (378)
T PRK14278 76 -GG-GGGFG------GGF--GGLGDVFEAFFGGGA-A--SR---------------------G-P-------RGRVRPGS 113 (378)
T ss_pred -CC-CCCCC------cCc--CchhHHHHHHhCCCC-C--CC---------------------C-C-------ccCCCCCC
Confidence 00 00111 012 246789999997410 0 00 0 0 01235688
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE---------------------cCCCe--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV---------------------DANGR-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~---------------------~g~G~-------------------------- 193 (337)
|+.+.+.|||+|+|+|+++++.+.+.+. +|.|.
T Consensus 114 d~~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~ 193 (378)
T PRK14278 114 DSLLRMRLDLEECATGVTKQVTVDTAVLCDRCHGKGTAGDSKPVTCDTCGGRGEVQTVQRSFLGQVMTSRPCPTCRGVGE 193 (378)
T ss_pred CeEEEEEEEHHHhcCCeEEEEEEEeeccCCCCcCccCCCCCCceecCCccCceEEEEEEeccceeEEEEEECCCCCccce
Confidence 9999999999999999999998876421 11221
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
++.+.++++|.||||+++|++|+|+|+|++.++ +.+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus 194 ~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~~~~h~~F~R~G~DL~~~~~Isl 273 (378)
T PRK14278 194 VIPDPCHECAGDGRVRARREITVKIPAGVGDGMRIRLAAQGEVGPGGGPAGDLYVEVHEQPHDVFVRDGDDLHCTVSVPM 273 (378)
T ss_pred eeCCCCCCCCCceeEecceEEEEEECCCCCCCcEEEEccCcCCCCCCCCCCCEEEEEEECcCCCEEEcCCCEEEEEecCH
Confidence 345668999999999999999999999999865 567999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
.+|++|+++.|+|+|+..+.|+||+++++|++++|+|+|||..+ ...+|||||+|+|.||+.|+++|+++|+++++
T Consensus 274 ~eAl~G~~~~i~tld~~~i~v~ip~g~~~g~~lrl~g~G~p~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~~~~ 349 (378)
T PRK14278 274 VDAALGTTVTVEAILDGPSEITIPPGTQPGSVITLRGRGMPHLR-SGGRGDLHAHVEVVVPTRLDHEDIELLRELKA 349 (378)
T ss_pred HHHhcCCeEEEecCCCCeEEEEeCCCcCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 99999999999999777799999999999999999999999765 35689999999999999999999999999984
No 8
>PRK14279 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=5.3e-65 Score=492.65 Aligned_cols=310 Identities=30% Similarity=0.474 Sum_probs=235.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|.+|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||+|||||+||++||+||+++...+...
T Consensus 7 ~~~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vLsD~~KR~~YD~~G~~~~~~g~~~ 85 (392)
T PRK14279 7 VEKDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGD-PAAEERFKAVSEAHDVLSDPAKRKEYDETRRLFAGGGFGG 85 (392)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhcchhhhhHHHHhhhhcccccccc
Confidence 468999999999999999999999999999999999865 4789999999999999999999999999997644322110
Q ss_pred C----CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCC
Q 019662 81 S----SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVP 156 (337)
Q Consensus 81 ~----~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (337)
. ++++++|..+. +. ...+++++|+.+++....++.+. |.++ |+.+. .. .....+
T Consensus 86 ~~~~~~~~~~g~~~~~---~~-~~~d~~~~f~~~~~~~~~~f~d~---------------f~~~-fg~~~-~~-~~~~~~ 143 (392)
T PRK14279 86 RRFDGGGGFGGFGTGG---DG-AEFNLNDLFDAAGRGGGGGIGDL---------------FGGL-FNRGG-GS-ARPSRP 143 (392)
T ss_pred ccccCCCCCCCccccc---cc-cCcChhhhhcccccccccchhhh---------------hhhh-hcCCC-cc-cccCCC
Confidence 0 00011111000 00 00122333322111000000000 0000 11000 00 001124
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEE----cCCC---------------------------------------e
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVV----DANG---------------------------------------R 193 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G---------------------------------------~ 193 (337)
+++.|+.+.|.|||+|+|+|+++++.+.+.+. +|+| +
T Consensus 144 ~~g~di~~~l~ltLee~~~G~~~~v~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~ 223 (392)
T PRK14279 144 RRGNDLETETTLDFVEAAKGVTMPLRLTSPAPCTTCHGSGARPGTSPKVCPTCNGSGVISRNQGAFGFSEPCTDCRGTGS 223 (392)
T ss_pred CCCCCeEEEEEEEHHHHhCCeEEEEeeeccccCCCCccccccCCCCCCCCCCCcceEEEEEEecceEEEEecCCCCceeE
Confidence 57899999999999999999999998865421 1111 0
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus 224 ~i~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl 303 (392)
T PRK14279 224 IIEDPCEECKGTGVTTRTRTINVRIPPGVEDGQRIRLAGQGEAGLRGAPSGDLYVTVHVRPDKVFGRDGDDLTVTVPVSF 303 (392)
T ss_pred EeCCcCCCCCCCeEEEEeeeeEEEeCCCCCCCcEEEEeCCccCCCCCCCCCCEEEEEEEecCCcceeecCcEEEEEEccH
Confidence 456678999999999999999999999999764 567999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
.+|++|+++.|+|+||+ +.|+||+++++|+++||+|+|||... +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus 304 ~eAl~G~~~~v~~ldg~-i~v~Ip~g~~~g~~iri~g~G~p~~~--~~~GDL~I~~~v~~P~~Ls~~q~~~l~~~~~ 377 (392)
T PRK14279 304 TELALGSTLSVPTLDGP-VGVKVPAGTADGRILRVRGRGVPKRS--GGAGDLLVTVKVAVPPNLDGAAAEALEAYAE 377 (392)
T ss_pred HHHcCCceEEEEcCCce-EEEEECCCCCCCCEEEECCCCCCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999997 89999999999999999999999643 5689999999999999999999999999875
No 9
>PRK14277 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.1e-65 Score=491.11 Aligned_cols=299 Identities=33% Similarity=0.576 Sum_probs=243.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+|+.+|++||+||++++..+...+
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~~~ 82 (386)
T PRK14277 4 KKDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGD-KEAEQKFKEINEAYEILSDPQKRAQYDQFGHAAFDPGGFGQ 82 (386)
T ss_pred CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhCCHHHHHHHHhhcccccccccccc
Confidence 47999999999999999999999999999999999865 46889999999999999999999999999998875321110
Q ss_pred CC-CCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 82 SS-GYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 82 ~~-~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
++ +..++..+ ++.|...++.|+|++||++ .|+. + + . . ....++++.
T Consensus 83 ~~~~~~g~~~~---~~~~~~~~~~d~f~~~F~~-~fgg-~----------------------~-~--~---~~~~~~kg~ 129 (386)
T PRK14277 83 GGFGQGGFGGG---GFDFDFGGFGDIFEDIFGD-FFGT-G----------------------R-R--R---AETGPQKGA 129 (386)
T ss_pred CCcCCCCcccc---CccccccchhHHHHHhhcc-cccC-C----------------------C-c--C---CCCCCCCCC
Confidence 00 00111100 1121112466889999873 1210 0 0 0 0 011235788
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~-------------------------- 193 (337)
|+.+.|.|||+|+|+|+++++.+.|.+. +|+| .
T Consensus 130 di~~~l~vtLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~ 209 (386)
T PRK14277 130 DIRYDLELTFEEAAFGTEKEIEVERFEKCDVCKGSGAKPGSKPVTCPVCHGTGQVRTRQNTPFGRIVNIRTCDRCHGEGK 209 (386)
T ss_pred CEEEEEEEEHHHHhCCeEEEEEEEeeccCCCCCCCCcCCCCCCccCCCCCCEEEEEEEEeccCceEEEEEECCCCCccee
Confidence 9999999999999999999999876542 1211 0
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus 210 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl 289 (386)
T PRK14277 210 IITDPCNKCGGTGRIRRRRKIKVNIPAGIDDGQMITLRGEGEPGIKGGPNGDLYIVIKVKPHPLFKREGYNVYLEMPITF 289 (386)
T ss_pred eccCCCCCCCCCcEEeeeeEEEEecCCCccCCcEEEEccccccCCCCCCCccEEEEEEEecCCCeEEecCCEEEEEEcCH
Confidence 34566789999999999999999999999864 4568999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
+|||+|+++.|+||||+ +.|+||+++++|++++|+|+|||..+ +..+|||||+|+|.||+.|+++|+++|++++.
T Consensus 290 ~eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~V~~P~~Ls~~qk~~l~~l~~ 364 (386)
T PRK14277 290 TDAALGGEIEIPTLDGK-VKFTIPEGTQTGTKFRLRGKGIPHLR-GRGRGDQIVKVYIEVPKKLTEKQKELLREFEK 364 (386)
T ss_pred HHHhCCCEEEEEcCCCC-EEEEECCCCCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 99999999999999997 89999999999999999999999765 34689999999999999999999999999973
No 10
>PRK14276 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.2e-65 Score=490.16 Aligned_cols=293 Identities=31% Similarity=0.551 Sum_probs=241.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
-.+|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||.+|++||+||++++.++...
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~~~~~~~~~ 79 (380)
T PRK14276 2 NNTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKE--PGAEEKYKEVQEAYETLSDPQKRAAYDQYGAAGANGGFGG 79 (380)
T ss_pred CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhcCHhhhhhHhhcCCccccCCCCC
Confidence 04899999999999999999999999999999999986 4688999999999999999999999999999887643211
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
.++++++|.. +..| .++.|+|++|||++. +. . . ...++++.
T Consensus 80 ~~~~~~~~~~----~~~~--~~~~d~f~~~fgg~~----~~---------------------~-~-------~~~~~~g~ 120 (380)
T PRK14276 80 GAGGFGGFDG----SGGF--GGFEDIFSSFFGGGG----AR---------------------R-N-------PNAPRQGD 120 (380)
T ss_pred CCCCCCCccc----cccc--cchhhHHHHHhCccc----cc---------------------c-C-------cCCCCCCC
Confidence 0001111110 0012 256799999997310 00 0 0 01235688
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~-------------------------- 193 (337)
|+.+.|.|||+|+|+|+++++.+.+.+. +| .|.
T Consensus 121 di~~~l~vtLee~~~G~~~~i~~~~~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~ 200 (380)
T PRK14276 121 DLQYRVNLDFEEAIFGKEKEVSYNREATCHTCNGSGAKPGTSPVTCGKCHGSGVITVDTQTPLGMMRRQVTCDVCHGTGK 200 (380)
T ss_pred CEEEEEEEEHHHhcCCeEEEEEeeccccCCCCcCcccCCCCCCccCCCCCCeeEEEEEEecCCceEEEEEECCCCCCCCc
Confidence 9999999999999999999998865421 11 110
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
++.+.++++|.||||+++|++|+|+|+|++.++ ..+|||+|+|+|++|+.|+|+|+||+++++|||
T Consensus 201 ~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl 280 (380)
T PRK14276 201 EIKEPCQTCHGTGHEKQAHTVSVKIPAGVETGQQIRLQGQGEAGFNGGPYGDLYVVFRVEPSKKFERDGSTIYYTLPISF 280 (380)
T ss_pred cccCCCCCCCCceEEEEEEEEEEEeCCCccCCcEEEEeccccCCCCCCCCcCEEEEEEEEECcceeeecceEEEEEecCH
Confidence 345668899999999999999999999999754 567999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
.||++|+++.|+|+||+ ++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus 281 ~eAl~G~~~~v~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~~l~~~~~ 355 (380)
T PRK14276 281 VQAALGDTVEVPTVHGD-VELKIPAGTQTGKKFRLRGKGAPKLR-GGGNGDQHVTVNIVTPTKLNDAQKEALKAFAK 355 (380)
T ss_pred HHHhCCCeEEEEcCCCc-EEEEECCCCCCCCEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999997 89999999999999999999999765 34689999999999999999999999999973
No 11
>PRK14280 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.7e-64 Score=487.37 Aligned_cols=290 Identities=32% Similarity=0.566 Sum_probs=241.2
Q ss_pred CC-CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCC
Q 019662 1 MG-MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPP 79 (337)
Q Consensus 1 m~-~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 79 (337)
|. +|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||.+|++||+||++++.++.+
T Consensus 1 ~~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~G~~~~~~~~~ 78 (376)
T PRK14280 1 MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKE--EGADEKFKEISEAYEVLSDDQKRAQYDQFGHAGPNQGFG 78 (376)
T ss_pred CCCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhccHhHHHHHHhcCccccccCcC
Confidence 53 799999999999999999999999999999999986 368999999999999999999999999999988764211
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCC
Q 019662 80 SSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKP 159 (337)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
. ++ |++.++.+ .| ++.|+|++|||++. .. . . ...++++
T Consensus 79 ~--~~---~~~~~~~~-~~---~~~d~f~~~fgg~~----~~----------------~----~---------~~~~~kg 116 (376)
T PRK14280 79 G--GG---FGGGDFGG-GF---GFEDIFSSFFGGGG----RR----------------R----D---------PNAPRQG 116 (376)
T ss_pred C--CC---CCCCCccc-cc---cchhhHHHHhCCcc----cc----------------C----c---------ccccccc
Confidence 0 00 10000000 11 45789999997310 00 0 0 0123568
Q ss_pred CCeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e-------------------------
Q 019662 160 PPVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R------------------------- 193 (337)
Q Consensus 160 ~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~------------------------- 193 (337)
.|+.+.+.|||+|+|+|++++|.+.|.+. +|+| .
T Consensus 117 ~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G 196 (376)
T PRK14280 117 ADLQYTMTLTFEEAVFGKEKEIEIPKEETCDTCHGSGAKPGTSKETCSHCGGSGQVSVEQNTPFGRVVNRQTCPHCNGTG 196 (376)
T ss_pred cCEEEEEEEEHHHHhCCceeEEEEeeeccCCCCCCcccCCCCCCccCCCCCCEEEEEEEeecCCceEEEEEEcCCCCCCC
Confidence 89999999999999999999998876532 1111 0
Q ss_pred --------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeC
Q 019662 194 --------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 258 (337)
Q Consensus 194 --------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Is 258 (337)
++.+.++++|.||+|+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++||
T Consensus 197 ~~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~i~l~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Is 276 (376)
T PRK14280 197 QEIKEKCPTCHGKGKVRKRKKINVKIPAGVDNGQQIRVSGEGEPGVNGGPAGDLYVVFRVRPHEFFERDGDDIYCEMPLT 276 (376)
T ss_pred ceecCCCCCCCCceEEEEEEEEEEEeCCCCcCCcEEEEcccccCCCCCCCCcCEEEEEEEecCCCeEEecCCEEEEEecC
Confidence 24566899999999999999999999999974 457899999999999999999999999999999
Q ss_pred HHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 259 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 259 l~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|+|||+|+++.|+|+||+ +.|+||+++++|++++|+|+|||... ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 277 l~eAl~G~~~~i~tldg~-i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~Ls~~q~~~l~~l~~ 352 (376)
T PRK14280 277 FAQAALGDEIEVPTLHGK-VKLKIPAGTQTGTQFRLKGKGVPNVR-GYGQGDQYVVVRVVTPTKLTDRQKELLREFAE 352 (376)
T ss_pred HHHHhCCCEEEEecCCce-EEEEECCCCCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999999996 89999999999999999999999765 34689999999999999999999999999873
No 12
>PRK14297 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-64 Score=488.94 Aligned_cols=293 Identities=32% Similarity=0.578 Sum_probs=243.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|++||+||++++..+.
T Consensus 3 ~~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~G~~~~~~~~--- 78 (380)
T PRK14297 3 SKDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGN-KEAEEKFKEINEAYQVLSDPQKKAQYDQFGTADFNGAG--- 78 (380)
T ss_pred CCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcCHhhhCchhhcCcccccccC---
Confidence 47999999999999999999999999999999999875 47899999999999999999999999999998875321
Q ss_pred CCCCCCCCCCCCCCCCCCC-CchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNP-RNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~-~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
+.+.++|+ ++.+.. .++.|+|++|||++ ++ +. + . . ...++++.
T Consensus 79 ~~~~~~~~-----~~~~~~~~~~~d~f~~~fgg~-~g--~~---------------------~-~---~---~~~~~kg~ 122 (380)
T PRK14297 79 GFGSGGFG-----GFDFSDMGGFGDIFDSFFGGG-FG--SS---------------------S-R---R---RNGPQRGA 122 (380)
T ss_pred CCCCCCCC-----CcCcccccchhHHHHHHhccC-cc--cc---------------------c-c---c---cCCCCCCC
Confidence 00001111 112111 24779999999741 11 00 0 0 0 11235788
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----c-----------------CCCe--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----D-----------------ANGR-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-----------------g~G~-------------------------- 193 (337)
|+++.|.|||+|+|+|++++|.+.+.+. + |.|.
T Consensus 123 di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~ 202 (380)
T PRK14297 123 DIEYTINLTFEEAVFGVEKEISVTRNENCETCNGTGAKPGTSPKTCDKCGGTGQIRVQRNTPLGSFVSTTTCDKCGGSGK 202 (380)
T ss_pred CEEEEEEEEHHHhcCCeEEEEEeeeeccCCCcccccccCCCcCccCCCccCeEEEEEEEEcCCceeEEEEeCCCCCCCce
Confidence 9999999999999999999998865431 1 1111
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++.+|+.|+|+|+||+++++|||
T Consensus 203 ~~~~~C~~C~G~g~v~~~~~i~V~Ip~G~~~G~~I~l~g~G~~~~~~~~~GDL~v~v~v~~h~~f~R~G~DL~~~~~Isl 282 (380)
T PRK14297 203 VIEDPCNKCHGKGKVRKNRKIKVNVPAGVDTGNVIPLRGQGEHGKNGGPTGDLYINIRVAPHKTFKRKGFDIYIDKHISF 282 (380)
T ss_pred EcCCCCCCCCCCeEEEeEeEEEEEeCCCCCCCcEEEEecCccCCCCCCCCccEEEEEEEcCCCCEEEeCCCEEEEEEeCH
Confidence 24567899999999999999999999999864 4568999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
+|||+|+++.|+|+||+ ++|+||+++++|+++||+|+|||..+ .+.+|||||+|+|.||+.|+++|+++|+++|+
T Consensus 283 ~eAl~G~~~~i~~ldg~-~~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~v~~P~~ls~~q~~~l~~~~~ 357 (380)
T PRK14297 283 AKAALGTEIKVPTVDGE-VKYEVPAGTQPGTVFRLKGKGVPRVN-STGRGNQYVTVIVDIPKKLNSKQKEALTMFME 357 (380)
T ss_pred HHHhCCCcEEEEcCCCc-EEEEECCCcCCCCEEEEcCCCcCCCC-CCCCCcEEEEEEEEcCCCCCHHHHHHHHHHHH
Confidence 99999999999999996 89999999999999999999999765 35789999999999999999999999999985
No 13
>PRK14287 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.1e-64 Score=485.56 Aligned_cols=285 Identities=29% Similarity=0.560 Sum_probs=239.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
-.+|||++|||+++||.+|||+|||+||++||||+|+. ++|+++|++|++||++|+||.+|++||+||++++.++..
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~--~~~~~~f~~i~~Ay~~L~d~~kR~~YD~~G~~~~~~~~~- 78 (371)
T PRK14287 2 SKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKA--PDAEDKFKEVKEAYDTLSDPQKKAHYDQFGHTDPNQGFG- 78 (371)
T ss_pred CCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCcHhHHHHHHhhCCcccccccC-
Confidence 03799999999999999999999999999999999985 468899999999999999999999999999987753210
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
+++ + + +| .++.|+|++|||++. +. . . ...++++.
T Consensus 79 -~~~---~--~-----~f--~~~~d~f~~~fgg~~----~~---------------------~-~-------~~~~~~g~ 112 (371)
T PRK14287 79 -GGG---A--G-----DF--GGFSDIFDMFFGGGG----GR---------------------R-N-------PNAPRQGA 112 (371)
T ss_pred -CCC---C--c-----cc--cchHHHHHhhhcccc----CC---------------------C-C-------CCCCCCCC
Confidence 000 0 0 12 136789999997410 00 0 0 01134688
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~-------------------------- 193 (337)
|+.+.+.|||+|+|+|++++|.+.+.+. +| .|.
T Consensus 113 d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~ 192 (371)
T PRK14287 113 DLQYTMTLEFKEAVFGKETEIEIPREETCGTCHGSGAKPGTKPETCSHCGGSGQLNVEQNTPFGRVVNRRVCHHCEGTGK 192 (371)
T ss_pred CEEEEEEEEHHHhcCCeEEEEEEeeeccCCCCCCcccCCCCCCcccCCCCCEEEEEEEEecCCceEEEEEeCCCCCCCCc
Confidence 9999999999999999999998876432 11 111
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus 193 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~G~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl 272 (371)
T PRK14287 193 IIKQKCATCGGKGKVRKRKKINVKVPAGIDHGQQLRVSGQGEAGVNGGPPGDLYVVFNVKPHEFFERDGDDIYCEMPLTF 272 (371)
T ss_pred cccccCCCCCCeeEEeeeEEEEEEECCcCCCCCEEEEccCCcCCCCCCCCccEEEEEEEecCCCEEEecCCeEEEEeccH
Confidence 23445789999999999999999999999974 4578999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
.||++|+++.|+|+||+ +.|+||+++++|+++||+|+|||..+ ...+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus 273 ~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~ 347 (371)
T PRK14287 273 PQVALGDEIEVPTLNGK-VKLKIPAGTQTGTSFRLRGKGVPNVH-GRGQGDQHVQVRVVTPKNLTEKEKELMREFAG 347 (371)
T ss_pred HHHhCCCEEEEEcCCCC-EEEEECCCccCCcEEEEcCCCccCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 99999999999999997 89999999999999999999999765 34689999999999999999999999999973
No 14
>PRK14298 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.1e-64 Score=486.18 Aligned_cols=286 Identities=34% Similarity=0.560 Sum_probs=240.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|+.||+||+++++.+..+
T Consensus 4 ~~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~~~~~- 80 (377)
T PRK14298 4 TRDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKE--PDAEEKFKEISEAYAVLSDAEKRAQYDRFGHAGIDNQYSA- 80 (377)
T ss_pred CCCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCC--hhHHHHHHHHHHHHHHhcchHhhhhhhhcCccccccccCc-
Confidence 3799999999999999999999999999999999985 4688999999999999999999999999999877532110
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 161 (337)
+ ..|..+ +| .++.|+|++|||++. .. . ...++++.|
T Consensus 81 ~---~~~~~~-----~~--~~~~d~f~~~Fgg~~----~~---------------------~---------~~~~~~g~d 116 (377)
T PRK14298 81 E---DIFRGA-----DF--GGFGDIFEMFFGGGG----RR---------------------G---------RMGPRRGSD 116 (377)
T ss_pred c---cccccC-----Cc--CcchhhhHhhhcCCC----cc---------------------C---------CCCCCCCCC
Confidence 0 011100 12 246689999997310 00 0 012356889
Q ss_pred eeeeeeechhhheeCceEEEEEEEEEE----c-----------------CCCe---------------------------
Q 019662 162 VESKLPCSLEELYSGSTRKMKISRTVV----D-----------------ANGR--------------------------- 193 (337)
Q Consensus 162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-----------------g~G~--------------------------- 193 (337)
+.+.+.|||+|+|+|+++++.+.+.+. + |.|.
T Consensus 117 i~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~ 196 (377)
T PRK14298 117 LRYDLYITLEEAAFGVRKDIDVPRAERCSTCSGTGAKPGTSPKRCPTCGGTGQVTTTRSTPLGQFVTTTTCSTCHGRGQV 196 (377)
T ss_pred EEEEEEEEHHHhhCCeEEEEEEEeeccCCCCCCCcccCCCCCCcCCCCCCccEEEEEEecCceeEEEEEeCCCCCCCCcc
Confidence 999999999999999999998876432 1 1221
Q ss_pred ------------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662 194 ------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA 260 (337)
Q Consensus 194 ------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~ 260 (337)
++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+|+||+++++|||.
T Consensus 197 ~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~v~~h~~F~R~G~DL~~~~~Isl~ 276 (377)
T PRK14298 197 IESPCPVCSGTGKVRKTRKITVNVPAGADSGLRLKLSGEGEAGSPGAPSGDLYIVLHVKEHDYFERVGDDIISEIPISFT 276 (377)
T ss_pred cCCCCCCCCCccEEEEEEEEEecCCCCCCCCCEEEEecccCCCCCCCCCcCEEEEEEEecCCCeEEEcCcEEEEEEeCHH
Confidence 2345689999999999999999999999996 567799999999999999999999999999999999
Q ss_pred HHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 261 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 261 eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|||+|+++.|+|+||+ +.|+||+++++|++++|+|+|||..+ +..+|||||+|+|.+|+.|+++++++|++++.
T Consensus 277 eAl~G~~~~i~tldG~-i~v~ip~g~~~g~~lri~g~G~p~~~-~~~~GDL~V~~~V~~P~~ls~~~~~ll~~l~~ 350 (377)
T PRK14298 277 QAALGADIMVPTLYGK-VKMNIPPGTQTHSVFRLKDKGMPRLH-GHGKGDQLVKVIVKTPTKLTQEQKELLREFDE 350 (377)
T ss_pred HHhCCCeEEEecCCCC-EEEEeCCCcccCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999999997 89999999999999999999999765 34689999999999999999999999999873
No 15
>PRK14295 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.1e-64 Score=486.81 Aligned_cols=303 Identities=33% Similarity=0.542 Sum_probs=237.1
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc----ccccccCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ----YGEEGLKD 76 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~----~G~~~~~~ 76 (337)
|.+|||+||||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|++||+ ||++++..
T Consensus 7 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~~~~~G~~g~~~ 85 (389)
T PRK14295 7 IEKDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGD-AKAEERFKEISEAYDVLSDEKKRKEYDEARSLFGNGGFRP 85 (389)
T ss_pred cccCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hhHHHHHHHHHHHHHHHCchhhHHHHHHHHhhhccccccc
Confidence 568999999999999999999999999999999999865 4689999999999999999999999999 99887753
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCC
Q 019662 77 MPPSSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVP 156 (337)
Q Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (337)
+... + +. + +|.| +++++|..+++.+.++ +....++. .|+++ |+.+ + ....+
T Consensus 86 ~~~~-~-~~-----~---~~~~---~~~~~f~~~~~~~~~~--~~~~~f~d--------~f~~~-fg~~--~---~~~~~ 136 (389)
T PRK14295 86 GPGG-G-GG-----G---GFNF---DLGDLFGGGAQGGGGA--GGGGGLGD--------VFGGL-FNRG--G---RRTQP 136 (389)
T ss_pred CCCC-C-CC-----C---CCCc---cccccccccccccccc--ccccchhh--------hhccc-ccCC--C---CCCCC
Confidence 2100 0 00 0 1111 2233333322111000 00000000 00000 1100 0 01123
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEE----c-------------------------------------------
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVV----D------------------------------------------- 189 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~------------------------------------------- 189 (337)
+++.|+++.|.|||+|+|+|++++|.+.+.+. +
T Consensus 137 ~~g~di~~~l~lsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~ 216 (389)
T PRK14295 137 RRGADVESEVTLSFTEAIDGATVPLRLTSQAPCPACSGTGAKNGTTPRVCPTCSGTGQVSRNSGGFSLSEPCPDCKGRGL 216 (389)
T ss_pred CCCCCEEEEEEEEHHHHhCCceEEEEeeccccCCCCcccccCCCCCCcCCCCCCCEeEEEEEecceEEEEecCCCcceeE
Confidence 57899999999999999999999999875421 1
Q ss_pred ----------CCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeC
Q 019662 190 ----------ANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVS 258 (337)
Q Consensus 190 ----------g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Is 258 (337)
|.| ++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++||
T Consensus 217 ~~~~~C~~C~G~g-~~~~~~~l~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Is 295 (389)
T PRK14295 217 IADDPCLVCKGSG-RAKSSRTMQVRIPAGVSDGQRIRLRGKGAPGERGGPAGDLYVVVHVDPHPVFGRSGDNLTVTVPVT 295 (389)
T ss_pred EeccCCCCCCCCc-eEeeeeEEEEEeCCCCCCCCEEEEcccccCCCCCCCCccEEEEEEEecCCCEEEecCCEEEEEeec
Confidence 111 34567899999999999999999999999864 566899999999999999999999999999999
Q ss_pred HHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 259 LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 259 l~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|.+|++|++++|+|+||+.++|+||+++++|++++|+|+|||..+ +.+|||||+|+|.||+.|+++|+++|++++.
T Consensus 296 l~eAl~G~~~~I~tldG~~~~v~ip~g~~~g~~iri~G~G~p~~~--~~~GDL~i~~~v~~P~~Ls~~qk~~l~~l~~ 371 (389)
T PRK14295 296 FPEAALGAEVRVPTLGGPPVTVKLPPGTPNGRVLRVRGKGAVRKD--GTRGDLLVTVEVAVPKDLSGKAREALEAFRE 371 (389)
T ss_pred HHHHhCCCeEEEECCCCCEEEEEECCccCCCcEEEECCCCcCCCC--CCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999999999998899999999999999999999999643 5689999999999999999999999999874
No 16
>PRK14301 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=3.5e-64 Score=484.37 Aligned_cols=290 Identities=31% Similarity=0.578 Sum_probs=241.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||++|||+++||.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||+++++++.
T Consensus 3 ~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kr~~yD~~g~~g~~~~~--- 78 (373)
T PRK14301 3 QRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDN-PEAEQKFKEAAEAYEVLRDAEKRARYDRFGHAGVNGNG--- 78 (373)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCC-hHHHHHHHHHHHHHHHhcchhhhhhhhhccccccccCC---
Confidence 58999999999999999999999999999999999875 46889999999999999999999999999998775321
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 161 (337)
++++|.+. ...| ..+.|+|++|||.+.. + + . . ...++++.|
T Consensus 79 --~~~g~~~~---~~~~--~~f~d~f~~~fg~g~~---~----------------------~-~--~----~~~~~~g~d 119 (373)
T PRK14301 79 --GFGGFSSA---EDIF--SHFSDIFGDLFGFSGG---G----------------------S-R--R----GPRPQAGSD 119 (373)
T ss_pred --CCCCcccc---cccc--cchHHHHHHHhhccCc---c----------------------c-c--c----CCCCCCCCC
Confidence 11111100 0012 2356788888762100 0 0 0 0 112357889
Q ss_pred eeeeeeechhhheeCceEEEEEEEEEE----cCCC---------------------------------------e-----
Q 019662 162 VESKLPCSLEELYSGSTRKMKISRTVV----DANG---------------------------------------R----- 193 (337)
Q Consensus 162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G---------------------------------------~----- 193 (337)
+.+.|.|||+|+|+|+++++.+.+.+. +|+| +
T Consensus 120 i~~~l~vtLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~~~~~ 199 (373)
T PRK14301 120 LRYNLTVSFRQAAKGDEVTLRIPKNVTCDDCGGSGAAPGTSPETCRHCGGSGQVRQSQGFFQIAVPCPVCRGEGRVITHP 199 (373)
T ss_pred EEEEEeccHHHHhCCceEEEEeeecccCCCCCCcccCCCCCCcccCCccCeeEEEEEeeeEEEEEeCCCCCceeeecCCC
Confidence 999999999999999999998865431 1111 0
Q ss_pred --------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhC
Q 019662 194 --------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALG 264 (337)
Q Consensus 194 --------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~ 264 (337)
++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++|||.+|++
T Consensus 200 C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDLiv~i~v~~h~~f~r~G~DL~~~~~Isl~eAl~ 279 (373)
T PRK14301 200 CPKCKGSGIVQQTRELKVRIPAGVDTGSRLRLRGEGEPGVHGGPPGDLYVVITVEDDKIFQRQGQDLVVTQEISFVQAAL 279 (373)
T ss_pred CCCCCCCceeccceEEEEEeCCCCcCCCEEEEeccccCCCCCCCCcCEEEEEEEEECCCceeecCcEEEEEEecHHHHhC
Confidence 35667899999999999999999999999875 567899999999999999999999999999999999999
Q ss_pred CcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 265 GTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 265 G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|+++.|+|+||+ ++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 280 G~~~~v~tldG~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~I~~~V~~P~~l~~~q~~~l~~l~~ 349 (373)
T PRK14301 280 GDRIEVPTLDDP-VTLDIPKGTQSGEVFRLRGKGLPYLG-SSQKGDLLVEVSVVTPTKLTKRQEELLREFEA 349 (373)
T ss_pred CCeEEEecCCcc-EEEEECCCcCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 999999999997 99999999999999999999999875 35689999999999999999999999999863
No 17
>PRK14281 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.4e-64 Score=485.33 Aligned_cols=307 Identities=35% Similarity=0.601 Sum_probs=241.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|.+|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+|+.+|+.||+||++++......
T Consensus 1 ~~~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~~r~~yD~~g~~~~~~~~~~ 79 (397)
T PRK14281 1 MKRDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDN-KEAEEHFKEVNEAYEVLSNDDKRRRYDQFGHAGVGSSAAS 79 (397)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCc-hHHHHHHHHHHHHHHHhhhhhhhhhhhhccchhhcccccc
Confidence 789999999999999999999999999999999999875 4688999999999999999999999999999887532110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHH---HhhhCCC-CCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIF---AEFFGSS-PFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVP 156 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f---~~~fg~~-~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (337)
.+ ..++..+ + .++.|+| ++|||++ .++.... + +|.+. |+.+ ........+
T Consensus 80 ~~--~~~~~~~---~-----~~~~d~f~~f~~~Fgg~~~~~~~~~-------~------~~~~~-~~g~--~~~~~~~~~ 133 (397)
T PRK14281 80 GG--GPGYGGG---G-----GDFNDIFSAFNDMFGGGARRGGGSP-------F------GFEDV-FGGG--GRRRRASAG 133 (397)
T ss_pred CC--CCCCCcC---C-----CCHHHHHHHHHHHhCCCcccccccc-------c------ccccc-cCCC--cccccccCC
Confidence 00 0011000 0 1344554 5788742 1110000 0 00000 1100 000001123
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEE----cC----------------CCe-----------------------
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVV----DA----------------NGR----------------------- 193 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g----------------~G~----------------------- 193 (337)
.++.|+++.+.|||+|+|+|+++++.+.+.+. +| .|.
T Consensus 134 ~~g~di~~~l~vtLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G 213 (397)
T PRK14281 134 IPGTDLKIRLKLTLEEIAKGVEKTLKIKKQVPCKECNGTGSKTGATETCPTCHGSGEVRQASKTMFGQFVNITACPTCGG 213 (397)
T ss_pred CCCCCEEEEEEeEHHHHhCCeEEEEEEEeeecCCCCCCcccCCCCCccCCCCCCCcEEEEEEecccceEEEEEecCCCcc
Confidence 46899999999999999999999998875532 11 111
Q ss_pred ----------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEe
Q 019662 194 ----------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHK 256 (337)
Q Consensus 194 ----------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~ 256 (337)
++.++++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++
T Consensus 214 ~G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~i~i~~~~h~~F~R~G~DL~~~~~ 293 (397)
T PRK14281 214 EGRVVKDRCPACYGEGIKQGEVTVKVTVPAGVQDGNYLTLRGQGNAGPRGGAPGDLIVVIEEKPHELFVRNGDDVIYNLA 293 (397)
T ss_pred eeeeeCCCCCCCCCCccEecceEEEEecCCCCCCCCEEEEecccccCCCCCCCCcEEEEEEEcCCCCeEEecCCEEEEEE
Confidence 23456799999999999999999999999976 4679999999999999999999999999999
Q ss_pred eCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 257 VSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 257 Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|||.|||+|+++.|+|+||+ +.|+||+++++|+++||+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus 294 Isl~eAl~G~~~~i~tldg~-i~v~ip~g~~~G~~~ri~g~G~P~~~-~~~~GDL~V~~~V~~P~~Ls~~qk~~l~~l~~ 371 (397)
T PRK14281 294 VSYPDLVLGTKVEVPTLDGA-VKLTIPAGTQPETMLRIPGKGIGHLR-GSGRGDQYVRVNVFVPKEVSHQDKELLKELKK 371 (397)
T ss_pred ecHHHHhcCCeEEeecCCcc-EEEEeCCccCCCcEEEEcCCCCCCCC-CCCCCCEEEEEEEEcCCCCCHHHHHHHHHHHh
Confidence 99999999999999999997 89999999999999999999999765 34789999999999999999999999999874
No 18
>PRK14282 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=8.2e-64 Score=481.75 Aligned_cols=300 Identities=30% Similarity=0.512 Sum_probs=241.3
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
+.+|||+||||+++||.+|||+|||+||++||||+|+.+.++|+++|++|++||+||+||.+|+.||+||++++......
T Consensus 2 ~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~g~~~~~~~~~~ 81 (369)
T PRK14282 2 EKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDPQKRAMYDRFGYVGEQPPYQE 81 (369)
T ss_pred CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcChhhHHHHhhcCcccccccccc
Confidence 13799999999999999999999999999999999987545689999999999999999999999999998876532110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
.+ +.++|....+. .|......|+|++|||+.. +. . . ....+++++
T Consensus 82 ~~-~~g~~~~~~~~--~~~~~~~~d~f~~~fgg~~----~~---------------------~----~---~~~~~~~g~ 126 (369)
T PRK14282 82 TE-SGGGFFEDIFK--DFENIFNRDIFDIFFGERR----TQ---------------------E----E---QREYARRGE 126 (369)
T ss_pred CC-CCCcccccccc--cccccccchhhhHhhcccC----Cc---------------------c----c---ccCCCCCCC
Confidence 00 00011000000 1111011378888886310 00 0 0 011235789
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----c-----------------CCCe--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----D-----------------ANGR-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-----------------g~G~-------------------------- 193 (337)
|+.+.+.|||+|+|+|+++++.+.|.+. + |.|.
T Consensus 127 di~~~l~~slee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~G~ 206 (369)
T PRK14282 127 DIRYEIEVTLSDLINGAEIPVEYDRYETCPHCGGTGVEPGSGYVTCPKCHGTGRIREERRSFFGVFVSERTCERCGGTGK 206 (369)
T ss_pred CeEEEEEEEHHHhcCCeEEEEEeeecccCCCCCccCCCCCCCCcCCCCCCCcCEEEEEEEccCcceEEEEECCCCCCcce
Confidence 9999999999999999999998876421 1 1111
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
++.+.++++|.||||+.+|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus 207 ~~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~i~i~v~~h~~F~r~G~DL~~~~~Isl 286 (369)
T PRK14282 207 IPGEYCHECGGSGRIRRRVRTTVKIPAGVEDGTVLRITGGGNAGYYGGPYGDLYVIVRVRPDPRFKRSGSDLIYDVTIDY 286 (369)
T ss_pred eCCCCCCCCCCceeEEEEEEEEEEeCCCCCCCCEEEEecccCCCCCCCCCCCEEEEEEEecCCcEEEecCCEEEEEEeCH
Confidence 34556899999999999999999999999864 5678999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
.||++|+++.|+|+||++++|+||+++++|++++|+|+|||... .+.+|||||+|+|.+|+.|+.+++++|++++.
T Consensus 287 ~eAl~G~~~~i~~ldG~~i~v~Ip~g~~~g~~iri~GkG~p~~~-~~~~GDL~V~~~v~~P~~l~~~~~~ll~~l~~ 362 (369)
T PRK14282 287 LQAILGTTVEVPLPEGGTTMLKIPPGTQPETVFRLKGKGLPNMR-YGRRGDLIVNVHVEIPKRLSREERKLLKELAK 362 (369)
T ss_pred HHHhCCCEEEEeCCCCcEEEEEeCCCcCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 99999999999999998899999999999999999999999754 34689999999999999999999999999874
No 19
>PRK14284 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.3e-64 Score=485.20 Aligned_cols=302 Identities=31% Similarity=0.524 Sum_probs=238.9
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC-C
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS-S 81 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~-~ 81 (337)
+|||+||||+++||.+|||+|||+||++||||+|+++ +.|+++|++|++||+||+|+.+|+.||+||++++..+... +
T Consensus 1 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~vL~d~~kR~~YD~~G~~g~~~g~~~~~ 79 (391)
T PRK14284 1 MDYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGD-AEAEKRFKEVSEAYEVLSDAQKRESYDRYGKDGPFAGAGGFG 79 (391)
T ss_pred CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-hHHHHHHHHHHHHHHHhcCHHHHHHHHhccccccccccCCcC
Confidence 4999999999999999999999999999999999875 4689999999999999999999999999999876432100 0
Q ss_pred CCCCCCCCCCCCCCC--CCCC--CchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCC
Q 019662 82 SSGYSYANGSGGNSK--GFNP--RNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPR 157 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~--~~~~--~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (337)
+++++.+.... ..| .|.+ ..+.|+|+.||++.... |+.. . ....++
T Consensus 80 ~~g~~~~~~~~-~~~~~~f~~~~~~~~d~f~~~fgg~g~~------------------------~~~~--~---~~~~~~ 129 (391)
T PRK14284 80 GAGMGNMEDAL-RTFMGAFGGEFGGGGSFFEGLFGGLGEA------------------------FGMR--G---GPAGAR 129 (391)
T ss_pred CCCcCcccchh-hhccccccccccccccchhhhccCcccc------------------------cccc--c---cCCCcC
Confidence 01110000000 000 0110 01246677776531000 0000 0 011235
Q ss_pred CCCCeeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe-----------------------
Q 019662 158 KPPPVESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR----------------------- 193 (337)
Q Consensus 158 ~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~----------------------- 193 (337)
++.|+.+.|.|||+|+|+|+++++.+.+.+. +| .|.
T Consensus 130 ~g~d~~~~l~vslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~v~~~~G~~~~~~~C~~C~G~G~~ 209 (391)
T PRK14284 130 QGASKKVHITLSFEEAAKGVEKELLVSGYKSCDACSGSGANSSQGIKVCDRCKGSGQVVQSRGFFSMASTCPECGGEGRV 209 (391)
T ss_pred CCCCeEEEEEEEHHHHhCCeeEEEEEeeeccCCCCcccccCCCCCCeecCccCCeeEEEEEeceEEEEEECCCCCCCCcc
Confidence 7889999999999999999999998876421 11 110
Q ss_pred ------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662 194 ------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA 260 (337)
Q Consensus 194 ------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~ 260 (337)
++.+.++++|.||||+.+|++|+|+|+|++.+ ++.+|||+|+|++++|+.|+|+|+||+++++|||+
T Consensus 210 ~~~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~ 289 (391)
T PRK14284 210 ITDPCSVCRGQGRIKDKRSVHVHIPAGVDSGMRLKMEGYGDAGQNGAPAGDLYVFIDVEPHPVFERRGDDLILELPIGFV 289 (391)
T ss_pred cCCcCCCCCCcceecceEEEEEEECCCCCCCCEEEEeccccCCCCCCCCCCEEEEEEEecCCCceeecCCEEEEEEecHH
Confidence 34567899999999999999999999999986 56789999999999999999999999999999999
Q ss_pred HHhCCcEEEEecCC-CcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 261 EALGGTSVSLITLD-GRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 261 eAl~G~~~~i~~l~-g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
||++|+++.|+|++ |..++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++.
T Consensus 290 eAl~G~~~~v~tld~g~~i~v~Ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~l~~ 365 (391)
T PRK14284 290 DAALGMKKEIPTLLKEGTCRLTIPEGIQSGTILKVRGQGFPNVH-GKGRGDLLVRISVETPQNLSEEQKELLRQFAA 365 (391)
T ss_pred HHhCCCeEEEeecCCCcEEEEEECCccCCCeEEEECCCCCCCCC-CCCCCcEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999 66799999999999999999999999775 34689999999999999999999999999873
No 20
>PRK14294 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.2e-63 Score=480.06 Aligned_cols=291 Identities=37% Similarity=0.608 Sum_probs=241.8
Q ss_pred CC-CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCC
Q 019662 1 MG-MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPP 79 (337)
Q Consensus 1 m~-~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~ 79 (337)
|. +|||+||||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||+||+||.+|+.||+||++++.++.
T Consensus 1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~-~~~~~~f~~~~~Ay~vL~d~~~r~~yD~~G~~g~~~~~- 78 (366)
T PRK14294 1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGD-KEAEELFKEAAEAYEVLSDPKKRGIYDQYGHEGLSGTG- 78 (366)
T ss_pred CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-hHHHHHHHHHHHHHHHhccHHHHHHHHhhccccccCCC-
Confidence 54 8999999999999999999999999999999999865 46899999999999999999999999999998875310
Q ss_pred CCCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCC
Q 019662 80 SSSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKP 159 (337)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (337)
.+++++|. . .| .++.|+|++|||.+..+ + + . ....++++
T Consensus 79 --~~~~~~~~-----~-~~--~~~~d~f~~~fg~g~~~-------------------------~-~--~---~~~~~~~g 117 (366)
T PRK14294 79 --FSGFSGFD-----D-IF--SSFGDIFEDFFGFGGGR-------------------------R-G--R---SRTAVRAG 117 (366)
T ss_pred --CCCcCccc-----c-ch--hhhhhhHHHhhccCCCc-------------------------C-C--c---ccCCCCCC
Confidence 00111110 0 12 24678999998711000 0 0 0 00123568
Q ss_pred CCeeeeeeechhhheeCceEEEEEEEEEE----cCC---------------------------------------C----
Q 019662 160 PPVESKLPCSLEELYSGSTRKMKISRTVV----DAN---------------------------------------G---- 192 (337)
Q Consensus 160 ~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~---------------------------------------G---- 192 (337)
.|+.+.+.|||+|+|+|+++++.+.+.+. +|+ |
T Consensus 118 ~d~~~~l~lslee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~G~~~~~~~C~~C~G~G~~~~ 197 (366)
T PRK14294 118 ADLRYDLTLPFLEAAFGTEKEIRIQKLETCEECHGSGCEPGTSPTTCPQCGGSGQVTQSQGFFSIRTTCPRCRGMGKVIV 197 (366)
T ss_pred CCceEEEEeeHHHhcCCeEEEEEeeecccCCCCCCccccCCCCcccCCCcCCeEEEEEEeeeEEEEeeCCCCCCcCeecC
Confidence 89999999999999999999998865431 111 1
Q ss_pred ---------eeeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHH
Q 019662 193 ---------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEA 262 (337)
Q Consensus 193 ---------~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eA 262 (337)
.++.+.++++|.||||+++|++|+|+|+|++. .++.+|||+|+|++++|+.|+|+|+||+++++|||.+|
T Consensus 198 ~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~F~R~G~DL~~~~~Isl~eA 277 (366)
T PRK14294 198 SPCKTCHGQGRVRVSKTVQVKIPAGVDTGSRLRLRGEGEAGVRGGPPGDLYVFLTVEPHEFFERDGNDVHCKVPISFVQA 277 (366)
T ss_pred cCCCCCCCceEeecceeEEEecCCCCcCCcEEEEccCccCCCCCCCCCcEEEEEEEccCCcceecCCCEEEEEEeCHHHH
Confidence 03566789999999999999999999999986 45678999999999999999999999999999999999
Q ss_pred hCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 263 LGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 263 l~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|+|+++.|+|+||+ +.|.||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus 278 l~G~~~~i~tldG~-~~v~ip~g~~~g~~iri~G~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~~ 349 (366)
T PRK14294 278 ALGAQIEVPTLEGE-RELKIPKGTQPGDIFRFKGKGIPSLR-GGGRGDQIIEVEVKVPTRLTKKQEELLTEFAR 349 (366)
T ss_pred hCCCeEEEECCCCc-EEEEECCCcCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 99999999999997 79999999999999999999999765 34689999999999999999999999999874
No 21
>PRK14291 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.2e-63 Score=480.46 Aligned_cols=305 Identities=34% Similarity=0.600 Sum_probs=244.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|.+|||++|||+++|+.+|||+|||+||++||||+|++ ++|+++|++|++||+||+||.+|++||+||++++......
T Consensus 1 ~~~d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vLsd~~kR~~YD~~g~~~~~~~~~~ 78 (382)
T PRK14291 1 AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKN--PEAEEKFKEINEAYQVLSDPEKRKLYDQFGHAAFSGSGQQ 78 (382)
T ss_pred CCCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhcCHHHHHHHhhhcccccccccCc
Confidence 78999999999999999999999999999999999986 4688999999999999999999999999999876532110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
..+..+|+ . |...++.|+|++||+. |++++. |++.....+ .......+.++.
T Consensus 79 -~~~~~~~~-----~--~~~~~~~d~f~~~f~~--fg~~~~---------------fg~~~~~~~---~~~~~~~~~~g~ 130 (382)
T PRK14291 79 -QQGQEGFS-----D--FGGGNIEDILEDVFDI--FGFGDI---------------FGRRRATRE---RRKTYQRPVKGE 130 (382)
T ss_pred -cccccccc-----c--ccCCCHHHHHHHHHHh--cccccc---------------ccccccccc---cccccccccCCC
Confidence 00000111 1 1123677899998652 211110 000000000 000011235789
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~-------------------------- 193 (337)
|+.+.|.|||+|+|+|+++++.+.+.+. +|+| .
T Consensus 131 di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~ 210 (382)
T PRK14291 131 DIYQTVEISLEEAYTGTTVSLEVPRYVPCEACGGTGYDPGSGEKVCPTCGGSGEIYQRGGFFRISQTCPTCGGEGVLREP 210 (382)
T ss_pred CEEEEEEEEHHHhhCCEEEEEEEeeeccCCCCccccCCCCCCCccCCCCCCceEEEEecceEEEEecCCCCCCceEEccC
Confidence 9999999999999999999999876532 1211 0
Q ss_pred --------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhC
Q 019662 194 --------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALG 264 (337)
Q Consensus 194 --------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~ 264 (337)
++.+.++++|.||||+.+|++|+|+|+|++.+ ++.+|||||+|++++|+.|+|+|+||+++++|||.||++
T Consensus 211 C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~g~~~GDL~v~i~~~~h~~F~r~G~DL~~~~~Isl~eAl~ 290 (382)
T PRK14291 211 CSKCNGRGLVIKKETIKVRIPPGVDNGSKLRVPGKGHAGRFGGPPGDLYIIVKVKPHPLFERRGDNLYLDVNITVAEAVL 290 (382)
T ss_pred CCCCCCCceEEeeeEEEEEeCCCCCCCCEEEEecCcCCCCCCCCCccEEEEEEEccCCCeeeecCCeEEEEEeeHHHHhC
Confidence 35567899999999999999999999999874 678999999999999999999999999999999999999
Q ss_pred CcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCC--CCC------HHHHHHHHHHhC
Q 019662 265 GTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPT--KLT------PEQRAGLKRALG 336 (337)
Q Consensus 265 G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~--~l~------~~~~~~l~~~l~ 336 (337)
|+++.|+|+||+.++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.||+ .|+ ++|+++|++++.
T Consensus 291 G~~~~i~~ldG~~l~V~Ip~g~~~G~~i~i~G~G~p~~~-~~~~GDL~V~~~V~~P~~~~ls~~~~~~~~~~~~~~~l~~ 369 (382)
T PRK14291 291 GTELEVPLLDGKKEKVKIPPGTKEGDKIRVPGKGMPRLK-GSGYGDLVVRVHIDVPKISMLSKLMGDGKKAKKLLKELDK 369 (382)
T ss_pred CCEEEEecCCCCEEEEEECCccCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCcCcCccccCCHHHHHHHHHHHh
Confidence 999999999998899999999999999999999999875 34689999999999998 599 999999999864
No 22
>PRK14299 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=7.2e-63 Score=460.97 Aligned_cols=282 Identities=35% Similarity=0.618 Sum_probs=232.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||+||||+++||.+|||+|||+||++||||+|++ +.++++|++|++||++|+|+.+|+.||+||++++..+....
T Consensus 3 ~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~kr~~yD~~g~~~~~~~~~~~ 80 (291)
T PRK14299 3 YKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKS--PGAEEKFKEINEAYTVLSDPEKRRIYDTYGTTAASAGWQGP 80 (291)
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccCC
Confidence 4899999999999999999999999999999999985 46899999999999999999999999999998654321110
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCC-CCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGS-SPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
..+..++ ++.+++.+ .+++|+|++|||+ ++++ +. +.. +. .. ...++++.
T Consensus 81 ~~~~~~~--~~~~~~~~--~~~~d~f~~~fgg~~~~~--~~----------------g~~-~~-~~------~~~~~~g~ 130 (291)
T PRK14299 81 PPGPPGG--GDFSGFNV--GDFSDFFQQLFGGRGGFG--GF----------------GDL-FG-SV------GRRARKGR 130 (291)
T ss_pred CCCCCCC--CCccccCc--CCHHHHHHHHhCCCCCCC--Cc----------------ccc-cc-cc------cCCCCCCC
Confidence 0000000 00111122 3678999999984 2111 00 000 00 00 01246789
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeC
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKP 240 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~ 240 (337)
|+++.+.|||+|+|+|+++.+.+. | ++++|+||||+++|++|+++|+|++. |||+|+|++++
T Consensus 131 dl~~~l~isL~ea~~G~~~~i~l~-------g------~~~~V~Ip~G~~~G~~ir~~g~G~~~-----GDL~v~i~v~~ 192 (291)
T PRK14299 131 DLEAELPLTLEEAYRGGEKVVEVA-------G------ERLSVRIPPGVREGQVIRLAGKGRQG-----GDLYLVVRLLP 192 (291)
T ss_pred CEEEEEEecHHHHhCCCeEEEeeC-------C------EEEEEecCCCcCCCcEEEECCCCCCC-----CCEEEEEEEcC
Confidence 999999999999999999988763 4 57899999999999999999999973 99999999999
Q ss_pred CCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 019662 241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP 320 (337)
Q Consensus 241 ~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P 320 (337)
|+.|+|+|+||+++++|||.+|++|+++.|+|+||+ ++|+||+++++|+++||+|+|||.. ++.+|||||+|+|.+|
T Consensus 193 h~~f~R~G~DL~~~~~Isl~eAl~G~~~~v~tldG~-~~v~ip~~~~~g~~~rl~g~G~p~~--~~~~GDL~v~~~V~~P 269 (291)
T PRK14299 193 HPVFRLEGDDLYATVDVPAPIAVVGGKVRVMTLDGP-VEVTIPPRTQAGRKLRLKGKGWPRG--PAGRGDQYAEVRITIP 269 (291)
T ss_pred CCCeEEECCEEEEEEecCHHHHhCCCEEEEECCCCC-EEEEeCCCcCCCCEEEECCCCCCCC--CCCCCCEEEEEEEECC
Confidence 999999999999999999999999999999999996 8999999999999999999999964 3578999999999999
Q ss_pred CCCCHHHHHHHHHHhC
Q 019662 321 TKLTPEQRAGLKRALG 336 (337)
Q Consensus 321 ~~l~~~~~~~l~~~l~ 336 (337)
+.|+++|+++|++++.
T Consensus 270 ~~l~~~~~~~l~~l~~ 285 (291)
T PRK14299 270 TRPTPEEERLYKQLAE 285 (291)
T ss_pred CCCCHHHHHHHHHHHh
Confidence 9999999999999863
No 23
>PRK14290 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.5e-62 Score=472.37 Aligned_cols=296 Identities=32% Similarity=0.542 Sum_probs=243.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|.+|||+||||+++||.+|||+|||+||++||||+|+.+.++|+++|++|++||++|+|+.+|++||+||+.++.++
T Consensus 1 m~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~G~~~~~~~--- 77 (365)
T PRK14290 1 MAKDYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDPQKRRQYDQTGTVDFGAG--- 77 (365)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcChhhhhhhcccCCcccccC---
Confidence 77899999999999999999999999999999999987655789999999999999999999999999999876421
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
+++ ++.++.. .| .++.|+|+.|||+. ++. +. ++.. +. ....++++.
T Consensus 78 -~~~---~~~~~~~--~~--~~~~d~f~~~fg~~-~~~-~~--------------------~~~~--~~--~~~~~~~~~ 123 (365)
T PRK14290 78 -GSN---FNWDNFT--HF--SDINDIFNQIFGGN-FGS-DF--------------------FSGF--GN--QQSTRNIDL 123 (365)
T ss_pred -CCC---ccccccc--cc--cchhHHHHHHhcCc-ccc-cc--------------------cccc--cc--ccCCCCCCC
Confidence 111 1000000 12 36789999999842 110 00 0000 00 011123578
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----cC----------------CCe---------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----DA----------------NGR--------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g----------------~G~--------------------------- 193 (337)
|+.+.|.|||+|+|+|+++++.+.+.+. +| .|.
T Consensus 124 di~~~l~lsLee~~~G~~~~i~~~r~~~C~~C~G~g~~~~~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~G~G~~ 203 (365)
T PRK14290 124 DIYTNLDISLEDAYYGTEKRIKYRRNAMCPDCSGTGAKNGKLITCPTCHGTGQQRIVRGQGFFRMVTVTTCRTCGGRGRI 203 (365)
T ss_pred CEEEEEEecHHHhcCCEEEEEEeeecccCCCCccccCCCCCCccCCCCCCcCEEEEEeccCeEEEEEEEeCCCCCCceeE
Confidence 9999999999999999999998865432 11 111
Q ss_pred ------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662 194 ------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE 261 (337)
Q Consensus 194 ------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e 261 (337)
++.+.++++|.||||+.+|++|+|+|+|+. +++.+|||+|+|++++|+.|+|+|+||+++++|||.+
T Consensus 204 ~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~g~G~~-~~~~~GDL~v~v~v~~h~~F~R~G~DL~~~~~Isl~e 282 (365)
T PRK14290 204 PEEKCPRCNGTGTVVVNEDISVKIPKGATDNLRLRVKGKGQS-YGGRTGDLYVVLRVNNDPNIQRINDDLYVDQKINFPQ 282 (365)
T ss_pred ccCCCCCCCCceeEEEeeEEEEEECCCCCCCcEEEEccccCC-CCCCCCCEEEEEEEcCCCCEEEecCCEEEEEEeCHHH
Confidence 345668899999999999999999999996 6778999999999999999999999999999999999
Q ss_pred HhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 262 ALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 262 Al~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|++|+++.|+|++|. ++|+||+++++|++++|+|+|||..+. ..+|||||+|+|.+|+.|+++++++|+++|+
T Consensus 283 Al~G~~~~I~~~~g~-i~V~Ip~g~~~g~~iri~g~G~p~~~~-~~~GDL~V~~~V~~P~~l~~~~~~ll~~~~~ 355 (365)
T PRK14290 283 AALGGEIEIKLFREK-YNLKIPEGTQPGEVLKIKGAGMPHLNG-HGSGDLLVRINVEVPKRLTSKQKELIREFFD 355 (365)
T ss_pred HhCCCEEEEEcCCce-EEEEECCccCCCcEEEECCCCCCCCCC-CCCCCEEEEEEEECCCCCCHHHHHHHHHHHH
Confidence 999999999999985 999999999999999999999997653 4689999999999999999999999999985
No 24
>PRK14300 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.8e-62 Score=472.60 Aligned_cols=294 Identities=31% Similarity=0.533 Sum_probs=240.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|.+|||+||||+++||.+|||+|||+||++||||+|+. ..++++|++|++||++|+|+.+|+.||+||++++......
T Consensus 1 ~~~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 78 (372)
T PRK14300 1 MSQDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDA--KDAEKKFKEINAAYDVLKDEQKRAAYDRFGHDAFQNQQSR 78 (372)
T ss_pred CCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--cCHHHHHHHHHHHHHHhhhHhHhhHHHhcccccccccccc
Confidence 78999999999999999999999999999999999984 3578899999999999999999999999999877532110
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
++.+ ++ + +|. .++.++|++||++. |+.++. .. ....+.++.
T Consensus 79 ~~~g--~~-----~--~~~-~~~~~~f~~~f~~~-~gg~~~--------------------~~--------~~~~~~~g~ 119 (372)
T PRK14300 79 GGGG--NH-----G--GFH-PDINDIFGDFFSDF-MGGSRR--------------------SR--------PTSSKVRGS 119 (372)
T ss_pred CCCC--CC-----C--ccc-cchhhhHHHHHHhh-cCCCCC--------------------CC--------CCcCCCCCC
Confidence 0000 00 0 111 13456677776531 110000 00 001124678
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~-------------------------- 193 (337)
|+.+.+.|||+|+|+|+++++.+.+.+. +|+| .
T Consensus 120 di~~~l~~sLee~~~G~~k~i~~~r~~~C~~C~G~g~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~ 199 (372)
T PRK14300 120 DLKYNLTINLEEAFHGIEKNISFSSEVKCDTCHGSGSEKGETVTTCDACSGVGATRMQQGFFTIEQACHKCQGNGQIIKN 199 (372)
T ss_pred CeeEEEEEEHHHHhCCceEEEEeeeccccCCCCCcccCCCCCCccCCCccCeEEEEEeeceEEEEEeCCCCCccceEeCC
Confidence 9999999999999999999998876432 1211 1
Q ss_pred ---------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHh
Q 019662 194 ---------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEAL 263 (337)
Q Consensus 194 ---------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl 263 (337)
++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+|+||+++++|||++|+
T Consensus 200 ~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~i~v~~h~~f~R~G~Dl~~~~~Isl~~Al 279 (372)
T PRK14300 200 PCKKCHGMGRYHKQRNLSVNIPAGVENGTRIRHTGEGEAGIRGGNSGDLYVDIAIKPHDIYKVDGANLHCKLPISFVNAA 279 (372)
T ss_pred CCCCCCCceEEEeeEEEEEEECCCCCCCcEEEEeccccCCCCCCCCCCEEEEEEECCCCCeEEecCCEEEEEecCHHHHh
Confidence 3456789999999999999999999999986 466789999999999999999999999999999999999
Q ss_pred CCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 264 GGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 264 ~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
+|+++.|+|+||+.++|+||+++++|++++|+|+|||..+ ...+|||||+|+|.||++|+++|+++|++++.
T Consensus 280 ~G~~~~i~~ldg~~i~v~Ip~g~~~g~~iri~g~G~p~~~-~~~~GDL~V~~~v~~P~~ls~~qk~~l~~l~~ 351 (372)
T PRK14300 280 LGGEIEVPVIEGGKVNLTIPAGTQNGDQLRLRSKGMSKMR-STIRGDMLTHIHVEVPKNLSKRQRELLEEFKK 351 (372)
T ss_pred CCCEEEEecCCCCEEEEEECCccCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999998899999999999999999999999765 34689999999999999999999999999873
No 25
>PRK10767 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.2e-62 Score=472.61 Aligned_cols=288 Identities=37% Similarity=0.629 Sum_probs=238.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||+||||+++||.+|||+|||+||++||||+|+.+ +.|+++|++|++||++|+|+.+|+.||+||++++..+..
T Consensus 3 ~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~r~~yd~~g~~~~~~~~~-- 79 (371)
T PRK10767 3 KRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGD-KEAEEKFKEIKEAYEVLSDPQKRAAYDQYGHAAFEQGGG-- 79 (371)
T ss_pred CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCc-HHHHHHHHHHHHHHHHhcchhhhhHhhhccccccccCCC--
Confidence 47999999999999999999999999999999999865 468899999999999999999999999999987753210
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 161 (337)
+++ |. + . .+|. ..+.++|+.|||++. + . . ...++++.|
T Consensus 80 ~~~---~~-~-~--~~~~-~~f~~~f~~~fgg~~-~--~----------------------~---------~~~~~~g~d 117 (371)
T PRK10767 80 GGG---FG-G-G--GGFG-DIFGDIFGDIFGGGR-G--G----------------------G---------RQRARRGAD 117 (371)
T ss_pred CCC---CC-C-c--cccc-cchhhhhhhhccCCc-c--c----------------------c---------CCCCCCCCC
Confidence 011 11 0 0 0121 124566776665210 0 0 0 012356889
Q ss_pred eeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e---------------------------
Q 019662 162 VESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R--------------------------- 193 (337)
Q Consensus 162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~--------------------------- 193 (337)
+++.|.|||+|+|+|+++++.+.+.+. +|+| .
T Consensus 118 i~~~l~vsLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~g~~~~~~~C~~C~G~G~~~~~~ 197 (371)
T PRK10767 118 LRYNMEITLEEAVRGVTKEIRIPTLVTCDTCHGSGAKPGTSPKTCPTCHGAGQVRMQQGFFTVQQTCPTCHGRGKIIKDP 197 (371)
T ss_pred eEEEEEeehHHhhCCeeEEEeeeecccCCCCCCcccCCCCCCccCCCCCCeeEEEEeeceEEEEEeCCCCCCceeECCCC
Confidence 999999999999999999998865432 1111 0
Q ss_pred --------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhC
Q 019662 194 --------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALG 264 (337)
Q Consensus 194 --------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~ 264 (337)
++.+.++++|.||||+++|++|+|+|+|++. +++.+|||+|+|++++|+.|+|+|+||++++.|||++||+
T Consensus 198 C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDL~v~i~v~~h~~F~R~G~DL~~~~~Isl~eAl~ 277 (371)
T PRK10767 198 CKKCHGQGRVEKEKTLSVKIPAGVDTGDRIRLSGEGEAGERGGPAGDLYVQIHVKEHPIFERDGNDLYCEVPISFTTAAL 277 (371)
T ss_pred CCCCCCCceEeeeeeEEEecCCCCCCCcEEEEecCccCCCCCCCCcCEEEEEEEeeCCCEEEecCCEEEEEEeCHHHHhC
Confidence 3456688999999999999999999999985 4567899999999999999999999999999999999999
Q ss_pred CcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 265 GTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 265 G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|+++.|+|+|| +++|.||+++++|++++|+|+|||..+ ++.+|||||+|+|.+|+.|+.+|+++|++++.
T Consensus 278 G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~~~~ll~~l~~ 347 (371)
T PRK10767 278 GGEIEVPTLDG-RVKLKIPEGTQTGKLFRLRGKGVKSVR-SGARGDLYCQVVVETPVNLTKRQKELLEEFEE 347 (371)
T ss_pred CCeEEEecCCC-cEEEEeCCCCCCCCEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999 589999999999999999999999765 35789999999999999999999999999974
No 26
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=100.00 E-value=1.3e-61 Score=465.06 Aligned_cols=291 Identities=36% Similarity=0.623 Sum_probs=240.6
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCCCC
Q 019662 4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSSS 83 (337)
Q Consensus 4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~ 83 (337)
|||++|||+++|+.+|||+|||+||++||||+|+. ++++++|++|++||++|+|+.+|++||+||++++..+....++
T Consensus 1 d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~--~~~~~~f~~i~~Ay~vL~d~~~R~~yd~~g~~~~~~~~~~~~~ 78 (354)
T TIGR02349 1 DYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKD--KEAEEKFKEINEAYEVLSDPEKRAQYDQFGHAGFNGGGGGGGG 78 (354)
T ss_pred ChHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--ccHHHHHHHHHHHHHHhhChHHHHhhhhcccccccccCcCCCC
Confidence 79999999999999999999999999999999984 4688999999999999999999999999999877532110000
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCCee
Q 019662 84 GYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPVE 163 (337)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~ 163 (337)
+++++. ...| .++.|+|++|||++ ++. + .. +...+++++|+.
T Consensus 79 ~~~~~~-----~~~~--~~~~~~f~~~fg~~-~g~-~---------------------~~--------~~~~~~~~~d~~ 120 (354)
T TIGR02349 79 GFNGFD-----IGFF--GDFGDIFGDFFGGG-GGS-G---------------------RR--------RRSGPRRGEDLR 120 (354)
T ss_pred CcCCcc-----ccCc--CchhhhHHHHhccC-ccc-C---------------------cc--------ccCCCCCCCCeE
Confidence 111000 0012 25679999999741 100 0 00 011245788999
Q ss_pred eeeeechhhheeCceEEEEEEEEEE----cCCC-------------------------------------------e---
Q 019662 164 SKLPCSLEELYSGSTRKMKISRTVV----DANG-------------------------------------------R--- 193 (337)
Q Consensus 164 ~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-------------------------------------------~--- 193 (337)
+.+.|||+|+|+|+++++.+.+.+. +|.| +
T Consensus 121 ~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~~~ 200 (354)
T TIGR02349 121 YDLELTFEEAVFGVEKEIEIPRKESCETCHGTGAKPGTDPKTCPTCGGTGQVRRQQGTPFGFFQQQQTCPTCGGEGKIIK 200 (354)
T ss_pred EEEEEEHHHHhCCeeEEEEeecCCcCCCCCCCCCCCCCCCccCCCCCCeeEEEEEEeccCCceEEEEecCCCCCcceecC
Confidence 9999999999999999998875432 1111 0
Q ss_pred ----------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHH
Q 019662 194 ----------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEA 262 (337)
Q Consensus 194 ----------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eA 262 (337)
++.+.++++|.||||+++|++|+|+|+|++.+ +..+|||+|+|++++|+.|+|+|+||+++++|||+||
T Consensus 201 ~~C~~C~G~g~v~~~~~l~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v~~h~~f~r~g~DL~~~~~isl~eA 280 (354)
T TIGR02349 201 EPCSTCKGKGRVKERKTITVKIPAGVDTGQRLRVSGKGNAGENGGPNGDLYVVIRVKPHKIFERDGNDLYIEVPISFTQA 280 (354)
T ss_pred CCCCCCCCCcEecccceEEEEECCCCCCCCEEEEecCccCCCCCCCCCCEEEEEEEecCcceEEecCCEEEEEEeCHHHH
Confidence 34567899999999999999999999999864 5678999999999999999999999999999999999
Q ss_pred hCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 263 LGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 263 l~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
|+|+++.|+|+|| .++|.||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+.+|+++|+++|+
T Consensus 281 l~G~~~~i~~ldG-~i~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~i~~~v~~P~~l~~~~~~~l~~~~~ 352 (354)
T TIGR02349 281 ILGGEIEVPTLDG-DVKLKIPAGTQSGTVFRLKGKGVPRLR-GNGRGDLLVTVKVETPKNLSKEQKELLEELAE 352 (354)
T ss_pred hCCCeEEEecCCc-eEEEEECCcccCCcEEEECCCCcCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 9999999999999 599999999999999999999999765 34789999999999999999999999999985
No 27
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=100.00 E-value=6.7e-61 Score=450.93 Aligned_cols=289 Identities=27% Similarity=0.406 Sum_probs=240.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
-.+|||++|||+++||.+|||+|||+||++||||+|+. +.++++|++|++||++|+|+.+|+.||+||......+...
T Consensus 2 ~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~--~~~~~~f~~i~~Ay~~L~~~~kr~~yD~~g~~~~~~~~~~ 79 (306)
T PRK10266 2 ELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKE--PDAEARFKEVAEAWEVLSDEQRRAEYDQLWQHRNDPQFNR 79 (306)
T ss_pred CcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhhhHHHHHHHHHhhccccCccccc
Confidence 04899999999999999999999999999999999975 3689999999999999999999999999986421111100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
+. .++++ ..+...++.++|+.|||.. + +. . . ...++++.
T Consensus 80 -~~---~~~~~----~~~~~~~~~~~f~~~~g~~--~--~~---------------------~----~----~~~~~kg~ 118 (306)
T PRK10266 80 -QF---QHGDG----QSFNAEDFDDIFSSIFGQH--A--RQ---------------------S----R----QRPAARGH 118 (306)
T ss_pred -cc---ccCCC----CCCCCCCHHHHHHHHhCCC--C--CC---------------------C----C----CCCCCCCC
Confidence 00 00000 0122236789999998731 0 00 0 0 01235688
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeec-ceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEe
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPE-SEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDE 238 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~-~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v 238 (337)
|+.+++.|||+|++.|+++.+.+.+.+|++.|.+..+ .++++|.||+|+++|++|+|+|+|++.. +..+|||+|+|++
T Consensus 119 di~~~v~isLee~~~G~~k~i~~~~~~~~g~G~~~~~~~~~~~V~Ip~G~~~G~~i~~~g~G~~~~~~~~~GDl~v~i~v 198 (306)
T PRK10266 119 DIEIEVAVFLEETLTEHKRTISYNLPVYNAFGMIEQEIPKTLNVKIPAGVGNGQRIRLKGQGTPGENGGPNGDLWLVIHI 198 (306)
T ss_pred ceEEEEEEEHHHhcCCceEEEEEecccccCCCeEEEeeeEEEEEEECCCCcCCcEEEEecCCcCCCCCCCCccEEEEEEE
Confidence 9999999999999999999999999998877733222 3579999999999999999999999864 4568999999999
Q ss_pred eCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 019662 239 KPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK 318 (337)
Q Consensus 239 ~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~ 318 (337)
+||+.|+|+|+||+++++|||++|++|+++.|+|++|+ +.|+||+++++|+++||+|+|||..+ .+|||||+|+|.
T Consensus 199 ~ph~~f~r~g~DL~~~~~Isl~~al~G~~~~i~~~~g~-v~v~ip~g~~~g~~~ri~g~G~p~~~---~~GdL~v~~~v~ 274 (306)
T PRK10266 199 APHPLFDIVGQDLEIVVPLAPWEAALGAKVTVPTLKES-ILLTIPPGSQAGQRLRVKGKGLVSKK---QTGDLYAVLKIV 274 (306)
T ss_pred cCCCCeEEeCCceEEEEecCHHHHhCCCEEEeeCCCcc-EEEEeCCCcCCCCEEEECCCCCCCCC---CCCCEEEEEEEE
Confidence 99999999999999999999999999999999999997 89999999999999999999999653 589999999999
Q ss_pred CCCCCCHHHHHHHHHHhC
Q 019662 319 FPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 319 ~P~~l~~~~~~~l~~~l~ 336 (337)
+|+.|+++|+++|++++.
T Consensus 275 ~P~~l~~~q~~l~~~l~~ 292 (306)
T PRK10266 275 MPPKPDEKTAALWQQLAD 292 (306)
T ss_pred CCCCCCHHHHHHHHHHHh
Confidence 999999999999999874
No 28
>PRK14283 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.5e-61 Score=465.90 Aligned_cols=291 Identities=33% Similarity=0.589 Sum_probs=232.4
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||++|||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+|+.+|++||+||++++.+...
T Consensus 4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~~Lsd~~kR~~YD~~G~~g~~~~~~-- 79 (378)
T PRK14283 4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEE--EGAEEKFKEISEAYAVLSDDEKRQRYDQFGHAGMDGFSQ-- 79 (378)
T ss_pred cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHhchhHHHHHHhhhcccccccccc--
Confidence 3799999999999999999999999999999999985 478999999999999999999999999999987652100
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 161 (337)
. +.|. ..+++++|..|+++ |+ +. |..+.|+++ . ...++++.|
T Consensus 80 ~---~~~~----------~~~~~~~~~~~~~~--~~--~~---------------f~~~~fgg~--~----~~~~~kg~d 121 (378)
T PRK14283 80 E---DIFN----------NINFEDIFQGFGFG--IG--NI---------------FDMFGFGGG--S----RHGPQRGAD 121 (378)
T ss_pred c---cccc----------ccCccccccccccc--hh--hh---------------ccccccCCC--C----CCCccCCCC
Confidence 0 0000 01112222222110 00 00 000001100 0 011346889
Q ss_pred eeeeeeechhhheeCceEEEEEEEEEE----cC-----------------CCe---------------------------
Q 019662 162 VESKLPCSLEELYSGSTRKMKISRTVV----DA-----------------NGR--------------------------- 193 (337)
Q Consensus 162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g-----------------~G~--------------------------- 193 (337)
+.+++.|||+|+|+|+++++.+.+.+. .| .|.
T Consensus 122 i~~~l~vsLed~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~~ 201 (378)
T PRK14283 122 IYTEVEITLEEAASGVEKDIKVRHTKKCPVCNGSRAEPGSEVKTCPTCGGTGQVKQVRNTILGQMMNVTTCPDCQGEGKI 201 (378)
T ss_pred eEEEeeeeHHHHhCCcceEEEeeeeccCCCCCccccCCCCCCccCCCcCCccEEEEEEeccCceEEEEEECCCCCcccee
Confidence 999999999999999999998875532 11 111
Q ss_pred ------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662 194 ------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA 260 (337)
Q Consensus 194 ------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~ 260 (337)
++.+.++++|.||||+++|++|+|+|+|++.+ ++.+|||+|+|+|++|+.|+|+|+||+++++|||.
T Consensus 202 ~~~~C~~C~G~g~v~~~~~l~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDLiv~i~v~~~~~f~r~G~DL~~~~~Isl~ 281 (378)
T PRK14283 202 VEKPCSNCHGKGVVRETKTISVKIPAGVETGSRLRVSGEGEMGDRGGEPGDLYVVIKVKPHKIFRREGANLYYEKPISFV 281 (378)
T ss_pred cCCCCCCCCCceeeccceeEEEEECCCCCCCcEEEEeccccCCCCCCCCccEEEEEEEEcCCCEEEecCCEEEEEecCHH
Confidence 24566899999999999999999999999964 56789999999999999999999999999999999
Q ss_pred HHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 261 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 261 eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
+|++|+++.|+|+|| ++.|.||+++++|+++||+|+|||... ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus 282 eAl~G~~~~i~tldG-~i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GdL~v~~~v~~P~~l~~~q~~ll~~~~~ 355 (378)
T PRK14283 282 QAALGDTVDVPTIDG-PVELKIPAGTQSGTTFRLKGHGMPSLR-WSGKGNLYVKVKVVVPKKLSPKQKELLREFAS 355 (378)
T ss_pred HHhcCCeEEEEcCCc-eEEEEeCCCCCCCCEEEECCCCCCCCC-CCCCCCEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 999999999999999 589999999999999999999999765 34689999999999999999999999999874
No 29
>PRK14293 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=4.4e-61 Score=463.57 Aligned_cols=292 Identities=32% Similarity=0.566 Sum_probs=240.5
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|..|||+||||+++||.+|||+|||+||++||||+|++ +.|+++|++|++||++|+||.+|++||+||++++.++
T Consensus 1 ~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~--~~a~~~f~~i~~Ay~vL~~~~~R~~yd~~g~~g~~~~--- 75 (374)
T PRK14293 1 MAADYYEILGVSRDADKDELKRAYRRLARKYHPDVNKE--PGAEDRFKEINRAYEVLSDPETRARYDQFGEAGVSGA--- 75 (374)
T ss_pred CCCChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--cCHHHHHHHHHHHHHHHhchHHHHHHhhccccccccC---
Confidence 78999999999999999999999999999999999986 3588999999999999999999999999999876521
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPP 160 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
.+++.++ .+ .++.|+|++|||+ |+ +.+ + .+ .+ . ....+.+++
T Consensus 76 --~~~~~~~-------~~--~~~~d~f~~~fg~--~~--~~~-------------~-~~--~~-~------~~~~~~kg~ 117 (374)
T PRK14293 76 --AGFPDMG-------DM--GGFADIFETFFSG--FG--GAG-------------G-QG--GR-R------RRRGPQRGD 117 (374)
T ss_pred --CCcCCcc-------cc--cchHHHHHHHhcc--cC--CCC-------------C-CC--cc-c------cccCccCCC
Confidence 0110000 11 1356899999973 11 000 0 00 00 0 011235688
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEE----c-----------------CCCe--------------------------
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVV----D-----------------ANGR-------------------------- 193 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~-----------------g~G~-------------------------- 193 (337)
|+.+.+.|||+|+|+|+++++.+.+.+. + |.|.
T Consensus 118 di~~~l~vsLee~~~G~~k~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~ 197 (374)
T PRK14293 118 DLRYDLKLDFREAIFGGEKEIRIPHLETCETCRGSGAKPGTGPTTCSTCGGAGQVRRATRTPFGSFTQVSECPTCNGTGQ 197 (374)
T ss_pred CeEEEEEeeHHHHhCCceEEEEeeccccCCCCCCcCCCCCCCCeeCCCCCCcceEEEEEecCcceEEEEeeCCCCCccee
Confidence 9999999999999999999998875421 1 1111
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
++.+.++++|.||||+++|++|+|+|+|++.. +..+|||+|+|++++|+.|+|+|+||+++++|||
T Consensus 198 ~~~~~C~~C~G~g~v~~~~~~~V~IppG~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~Isl 277 (374)
T PRK14293 198 VIEDPCDACGGQGVKQVTKKLKINIPAGVDTGTRLRVSGEGDAGLRGGPPGDLYVYLFVKNDPEFRRDGINILSEIKISY 277 (374)
T ss_pred EeccCCCCCCCCcccccceEEEEEeCCCCCCCCEEEEccCccCCCCCCCCcCEEEEEEEeCCCccChhhhceEEEeccCH
Confidence 23456788999999999999999999999864 5668999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
.||++|+++.|+|+||+ ++|+||+++++|+++||+|+|||..+..+.+|||||+|+|.||+.|+++|+++|+++|.
T Consensus 278 ~eAl~G~~~~i~~ldG~-~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~v~~~v~~P~~l~~~~~~l~~~l~~ 353 (374)
T PRK14293 278 LQAILGDTLEVDTVDGP-VELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHLITVKVKIPTRISDEERELLEKLAK 353 (374)
T ss_pred HHHhCCCEEEecCCCCC-EEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEEEEEEEECCCCCCHHHHHHHHHHHh
Confidence 99999999999999997 89999999999999999999999765444689999999999999999999999999874
No 30
>PRK14292 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=2.4e-60 Score=458.52 Aligned_cols=285 Identities=34% Similarity=0.590 Sum_probs=238.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
+.|||++|||+++|+.+|||+|||+||++||||+|++ ++|+++|++|++||++|+||.+|+.||+||+++..+.
T Consensus 1 ~~d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~--~~a~~~~~~i~~Ay~vL~d~~~r~~yd~~G~~~~~~~---- 74 (371)
T PRK14292 1 MMDYYELLGVSRTASADEIKSAYRKLALKYHPDRNKE--KGAAEKFAQINEAYAVLSDAEKRAHYDRFGTAPGAGM---- 74 (371)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCC--hhHHHHHHHHHHHHHHhcchhhhhhHhhcCCcccccc----
Confidence 3799999999999999999999999999999999985 4689999999999999999999999999998763210
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 161 (337)
. +.+.|+ ++.| ++.|+|+.|||+..++ + . .+ ...+.++.|
T Consensus 75 ~-~~~~~~-----~~~~---d~~d~f~~~fg~~~~~--~------------------~--~~---------~~~~~~g~d 114 (371)
T PRK14292 75 P-GGDPFG-----GMGF---DPMDIFEQLFGGAGFG--G------------------G--RG---------RRGPARGDD 114 (371)
T ss_pred c-CCcccC-----ccCC---ChHHHHHHhhCCCCcC--C------------------C--CC---------cccccCCCC
Confidence 0 000111 1122 5679999999842111 0 0 00 012346889
Q ss_pred eeeeeeechhhheeCceEEEEEEEEEE----cC------------------CCe--------------------------
Q 019662 162 VESKLPCSLEELYSGSTRKMKISRTVV----DA------------------NGR-------------------------- 193 (337)
Q Consensus 162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g------------------~G~-------------------------- 193 (337)
+++.+.|||+|+++|+++++.+.+.+. +| .|.
T Consensus 115 ~~~~l~~sLee~~~G~~~~v~~~r~~~C~~C~G~G~~~~~~~~~~C~~C~G~G~~~~~~~~~~g~~~~~~~C~~C~G~G~ 194 (371)
T PRK14292 115 LETEARITLEQARAGEEVEVEVDRLTECEHCHGSRTEPGGKPPKTCPTCRGAGAVRAQARTIFGVVETQQPCPTCRGEGQ 194 (371)
T ss_pred eEEEEeccHHHHcCCeEEEEEEEeeecCCCCcccccCCCCCCCccCCCCCCccEEEEEEeccCceEEEeeecCCCcccce
Confidence 999999999999999999999876432 11 111
Q ss_pred -------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHH
Q 019662 194 -------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLA 260 (337)
Q Consensus 194 -------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~ 260 (337)
++.+.++++|.||+|+.+|++|+|+|+|++.+++. |||||+|++++|+.|+|+|+||++.++|||.
T Consensus 195 ~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~~~G~G~~~~~~~-GDL~v~i~v~~h~~f~r~g~dL~~~~~isl~ 273 (371)
T PRK14292 195 IITDPCTVCRGRGRTLKAETVKVKLPRGIDEGYRIRVAGMGNEGPGGN-GDLYVHIEMEPHPELRREQEHLIYEARIGFA 273 (371)
T ss_pred ecCCCCCCCCCceEEeecceEEEEECCCCCCCcEEEEecCcCCCCCCC-CCEEEEEEEecCCccccchhceeEEeccCHH
Confidence 23456789999999999999999999999987665 9999999999999999999999999999999
Q ss_pred HHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019662 261 EALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335 (337)
Q Consensus 261 eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l 335 (337)
+|++|+++.|+|++|+ +.|.||+++++|++++|+|+|||..+ ...+|||||+|+|.+|+.|+++|+++|++++
T Consensus 274 eAl~G~~~~i~tldG~-~~v~ip~g~~~g~~~~i~g~G~p~~~-~~~~GDL~V~~~v~~P~~l~~~q~~ll~~~~ 346 (371)
T PRK14292 274 KAALGGQITVPTLDGP-QVIEVKPGTQHGDLHRLRGQGMPRLQ-GAGTGDLIVEYEIAVPKQLSPEAREALEAYA 346 (371)
T ss_pred HHhCCCeEEEECCCCC-EEEecCCCcCCCcEEEECCCCCCCCC-CCCCCCEEEEEEEECCCCCCHHHHHHHHHHH
Confidence 9999999999999997 58999999999999999999999765 3468999999999999999999999999987
No 31
>PRK14289 chaperone protein DnaJ; Provisional
Probab=100.00 E-value=1.3e-59 Score=455.39 Aligned_cols=296 Identities=36% Similarity=0.607 Sum_probs=237.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
.+|||++|||+++|+.+|||+|||+||++||||+|+.+ ++|+++|++|++||++|+||.+|++||+||+++++.+..
T Consensus 4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~yD~~G~~~~~~~~~-- 80 (386)
T PRK14289 4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGD-KEAEEKFKEAAEAYDVLSDPDKRSRYDQFGHAGVGGAAG-- 80 (386)
T ss_pred cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCC-hHHHHHHHHHHHHHHHhcCHHHHHHHHHhcccccccCCC--
Confidence 57999999999999999999999999999999999876 478999999999999999999999999999987653210
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhh---hCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEF---FGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRK 158 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~---fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (337)
. ++|.+. . .++.++|+.| |++. |+ +.+ +... ++.+. ....+.+
T Consensus 81 ~---~~~~~~-----~---~~~~~~f~~f~~~fg~~-~g--g~~-------------~~~~--~~~~~-----~~~~~~~ 126 (386)
T PRK14289 81 G---GGFSGE-----G---MSMEDIFSMFGDIFGGH-GG--GFG-------------GFGG--FGGGG-----SQQRVFR 126 (386)
T ss_pred C---CCCCCC-----C---cChhhhhHHhhhhhccc-cc--Ccc-------------cccc--ccccc-----ccCCCCC
Confidence 0 011100 1 1334454443 5421 11 000 0000 00000 0112346
Q ss_pred CCCeeeeeeechhhheeCceEEEEEEEEEE----cCCC-----------------e------------------------
Q 019662 159 PPPVESKLPCSLEELYSGSTRKMKISRTVV----DANG-----------------R------------------------ 193 (337)
Q Consensus 159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~G-----------------~------------------------ 193 (337)
+.|+++.+.|||+|+|+|+++++.+.+.+. +|+| .
T Consensus 127 g~di~~~l~vsLee~~~G~~~~i~~~r~~~C~~C~G~G~~~~~~~~~C~~C~G~G~~~~~~~~~~G~~~~~~~C~~C~G~ 206 (386)
T PRK14289 127 GSDLRVKVKLNLKEISTGVEKKFKVKKYVPCSHCHGTGAEGNNGSETCPTCKGSGSVTRVQNTILGTMQTQSTCPTCNGE 206 (386)
T ss_pred CCCeEEEEEEEHHHhhCCeEEEEEEEeecccCCCCCCCCCCCCCCCcCCCCcCeEEEEEEEecccceEEEEEecCCCCcc
Confidence 889999999999999999999998876532 1111 1
Q ss_pred ---------------eeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEEEEeeCCCccccCCCceEEEEee
Q 019662 194 ---------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKV 257 (337)
Q Consensus 194 ---------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~I 257 (337)
++.+.++++|.||+|+++|++|+|+|+|++. .+..+|||+|+|++++|+.|+|+++||++++.|
T Consensus 207 G~~~~~~C~~C~G~g~v~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~~GDL~v~v~v~~~~~f~r~g~DL~~~~~I 286 (386)
T PRK14289 207 GKIIKKKCKKCGGEGIVYGEEVITVKIPAGVAEGMQLSMNGKGNAGKHGGVNGDLLVVIEEEPHPELIRDENDLIYNLLL 286 (386)
T ss_pred ccccCcCCCCCCCCcEEeeeEEEEEEeCCCCCCCCEEEEeccccCCCCCCCCccEEEEEEEecCCcccccccceeEEecc
Confidence 3456678999999999999999999999987 466789999999999999999999999999999
Q ss_pred CHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHhC
Q 019662 258 SLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 258 sl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~ 336 (337)
||.+|++|+++.|+|++|+ ++|.||+++++|+++||+|+|||..+ ...+|||||+|+|.||+.|+++|+++|++++.
T Consensus 287 sl~eAl~G~~~~i~~ldg~-i~v~ip~g~~~g~~~ri~g~G~p~~~-~~~~GDL~v~~~v~~P~~l~~~q~~~l~~l~~ 363 (386)
T PRK14289 287 SVPTAALGGAVEVPTIDGK-AKVKIEAGTQPGKVLRLRNKGLPSVN-GYGTGDLLVNVSVYIPETLSKEEKQTLEKMEN 363 (386)
T ss_pred CHHHHhCCCeEEeecCCce-EEEEECCccCCCcEEEECCCCcCCCC-CCCCCcEEEEEEEEeCCCCCHHHHHHHHHHHh
Confidence 9999999999999999996 89999999999999999999999765 34689999999999999999999999999984
No 32
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=5.7e-58 Score=424.75 Aligned_cols=271 Identities=48% Similarity=0.811 Sum_probs=234.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
+..||+||+|+++||++|||+|||+||++||||+||+ +.++|++|++||||||||+||++||+||+++++.+..+
T Consensus 3 ~~~~y~il~v~~~As~~eikkayrkla~k~HpDkn~~----~~ekfkei~~AyevLsd~ekr~~yD~~g~~~~~~g~~~- 77 (337)
T KOG0712|consen 3 NTKLYDILGVSPDASEEEIKKAYRKLALKYHPDKNPD----AGEKFKEISQAYEVLSDPEKREIYDQYGEEGLQGGGGG- 77 (337)
T ss_pred ccccceeeccCCCcCHHHHHHHHHHHHHHhCCCCCcc----HHHHHHHHHHHHHHhcCHHHHHHHHhhhhhhhcccCCC-
Confidence 4689999999999999999999999999999999997 67999999999999999999999999999998653111
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 161 (337)
++ +. . |++||+ |+ +. + .+.+.+++|
T Consensus 78 ---------~g-----~~--~----f~~~F~---~g--~~---------------------~---------~~~~~rg~~ 102 (337)
T KOG0712|consen 78 ---------GG-----FG--G----FSQFFG---FG--GN---------------------G---------GRGRQRGKD 102 (337)
T ss_pred ---------CC-----Cc--c----HHHhcc---CC--Cc---------------------C---------ccccccCCC
Confidence 11 10 1 888887 22 00 0 011233899
Q ss_pred eeeeeeechhhheeCceEEEEEEEEEEc----CC-------------------------------------------C--
Q 019662 162 VESKLPCSLEELYSGSTRKMKISRTVVD----AN-------------------------------------------G-- 192 (337)
Q Consensus 162 ~~~~l~vsl~e~~~G~~~~i~~~r~~~~----g~-------------------------------------------G-- 192 (337)
+.+.+.|||+|+|.|.++++.+.++.++ |. |
T Consensus 103 ~~~~~~~~Le~~y~G~s~kl~l~~~~iCs~C~GsGgksg~~~~C~~C~GsGv~~~~~~~gPg~~qs~q~~C~~C~G~G~~ 182 (337)
T KOG0712|consen 103 VVHQLKVTLEELYMGKSKKLFLSRNFICSKCSGSGGKSGSAPKCTTCRGSGVQTRTRQMGPGMVQSPQLVCDSCNGSGET 182 (337)
T ss_pred ceEEEEEEHHHhhcCCccceecccCccCCcCCCCCCCCCCCCCCCCCCCCCceeEEEeccccccccceeEeccCCCcccc
Confidence 9999999999999998888877765431 11 1
Q ss_pred -------------eeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCH
Q 019662 193 -------------RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 193 -------------~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
.++.+.+.++|.|++|+.+++.|.+.|++++.++..+||+++.|..++|+.|.|.++||+++.+|+|
T Consensus 183 ~~~kd~C~~C~G~~~v~~kkil~v~V~~g~~~~~ki~f~geadea~g~~pgD~vl~i~~k~h~~F~Rrg~dL~~~~~i~l 262 (337)
T KOG0712|consen 183 ISLKDRCKTCSGAKVVREKKILEVHVEPGMPHGQKITFKGEADEAPGTKPGDVVLLIDQKEHPGFDRRGSDLYRKLTISL 262 (337)
T ss_pred ccccccCcccccchhhhhhheeeccccCCCcccceeeeeeeeeecCCCcCccEEEEecccccccceecccccceeeecch
Confidence 0467788999999999999999999999999998889999999999999999999999999999999
Q ss_pred HHHhCCcEEEEecCCCcEEEEEcCC--CCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHHHHHHHh
Q 019662 260 AEALGGTSVSLITLDGRDLNIAVTD--IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRAGLKRAL 335 (337)
Q Consensus 260 ~eAl~G~~~~i~~l~g~~~~v~i~~--~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~~l~~~l 335 (337)
.||++|+.+.+.|+||+.+++.+++ ++++|.+++|+|+|||..+++ +|||||+|.|+||+ +++++...|+.+|
T Consensus 263 ~eal~G~~~~~~~ldGr~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~--~g~lyi~~~v~fp~-~~~~~~~~l~~~l 337 (337)
T KOG0712|consen 263 VEALCGFQRVWETLDGRLLKLSSKPGEVISPGDTKRVEGEGMPIFRNP--KGDLYIKFEVKFPK-LSPSQLKMLEDLL 337 (337)
T ss_pred hhccccceEEEEccCCceEEEecCCCceeChhHEEeecCCCcccccCC--CCcEEEEEEEEcCC-CChHHHHHHHhhC
Confidence 9999999999999999999998854 799999999999999999854 99999999999999 9999999999876
No 33
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=100.00 E-value=4e-42 Score=342.10 Aligned_cols=154 Identities=17% Similarity=0.207 Sum_probs=138.2
Q ss_pred eeeeechhhheeCceEEEEEEEEEEcCCC-eeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCC
Q 019662 164 SKLPCSLEELYSGSTRKMKISRTVVDANG-RQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHD 242 (337)
Q Consensus 164 ~~l~vsl~e~~~G~~~~i~~~r~~~~g~G-~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~ 242 (337)
+.+.|+|+++|+||+++|++.|.+|++.| +.+.+.++++|+||||+++|++|+|+|+|+..+++. |||+|+|++++|+
T Consensus 661 y~l~vtLEeLY~G~tKkIKitR~V~~g~G~ktvkE~ktLeVkIPpGVkdGqkIRf~GeGDegpgg~-GDLyVvIkVKPHp 739 (871)
T TIGR03835 661 YEEEVPQILFFNNQIKEIKYTRHTVDGNTESTTNEAITLEIQLPITSQLNISAIFKGFGHDFGNGC-GDLKVVFKVIPSN 739 (871)
T ss_pred EecccCHHHHhCCCeEEEEEEEeeccCCCcceeeeeEEEEEecCCCCCCCCEEEeccccCCCCCCC-CCEEEEEEEcCCC
Confidence 46777888899999998888888887666 345667899999999999999999999999876654 9999999999999
Q ss_pred ccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE-CCC
Q 019662 243 VYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK-FPT 321 (337)
Q Consensus 243 ~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~-~P~ 321 (337)
.|+|+|+||+++++|+|.+||+|+++.|+||||+ +.|+||+++++|+++||+|+|||... +.+|||||+|+|. +++
T Consensus 740 ~FrRdGdDL~~~v~ISL~EALLGgtIeIpTLDGr-VkLkIPpgTqpGqvLRIkGKGMP~~~--~~RGDLyV~f~V~~~~k 816 (871)
T TIGR03835 740 FFQIKNDGLHVAALVDPLVAYNGGIIDVFGPNKL-FNVRIPGGIKVNDQVIFKDLGLTKTK--YDKGSLIVHLYYSSVMK 816 (871)
T ss_pred CeEEECCeEEEEEecCHHHHhcCCEEEeeCCCCC-EEEeeCCCCCCCcEEEECCCCCCCCC--CCCCCEEEEEEEeeccc
Confidence 9999999999999999999999999999999997 89999999999999999999999543 5689999999995 455
No 34
>KOG0713 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=1.4e-43 Score=324.86 Aligned_cols=278 Identities=39% Similarity=0.682 Sum_probs=223.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
++|||+||||+++|+..|||+||||||++||||+||++ +.|.+.|++|+.||||||||.+|+.||+||++++....-..
T Consensus 15 ~rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpdd-p~A~e~F~~in~AYEVLsDpekRk~YD~~GEegL~~~~~~~ 93 (336)
T KOG0713|consen 15 GRDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDD-PNANEKFKEINAAYEVLSDPEKRKHYDTYGEEGLKDENKDG 93 (336)
T ss_pred CCCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-HHHHHHHHHHHHHHHHhcCHHHHHHHHhhhHhhhccccccc
Confidence 58999999999999999999999999999999999998 58999999999999999999999999999999997531000
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPP 161 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 161 (337)
. ++. ...++|+.||+. |+.+ +++. .......++.+
T Consensus 94 ~-------~g~---------~~~~~f~~~f~d--fg~~----------------------~~g~-----~~~e~~~~g~~ 128 (336)
T KOG0713|consen 94 E-------GGG---------GGNDIFSAFFGD--FGVT----------------------VGGN-----PLEEALPKGSD 128 (336)
T ss_pred c-------cCC---------cccchHHHhhcc--cccc----------------------cCCC-----cccCCCCCCce
Confidence 0 010 115788888874 2110 0000 00122456778
Q ss_pred eeeeeeechhhheeCceEE----------EEEEEEEE---------cCCC----------------eeeecceEEEEEeC
Q 019662 162 VESKLPCSLEELYSGSTRK----------MKISRTVV---------DANG----------------RQTPESEILTIDVK 206 (337)
Q Consensus 162 ~~~~l~vsl~e~~~G~~~~----------i~~~r~~~---------~g~G----------------~~~~~~~~~~V~Ip 206 (337)
+...++.+++++|.|...+ +...+.++ .+.| +.+.++..+++.+.
T Consensus 129 V~~~~e~~~~h~y~~~~~e~~r~~~v~~~~~g~~~~~~~~~~~~~~~~~g~~~~~q~~~~~~~~~~k~~~e~~~~~~~~~ 208 (336)
T KOG0713|consen 129 VSSDLEKQLEHFYMGNFVEEVREKGVYKPAPGTRKCNCRLEMFTQQEGPGRFQMLQEAVCDECPNVKLVLEEDPLEVEFE 208 (336)
T ss_pred EEeehhhchhhhhcccHHHHHhccCceeecCcccccCChhhheeeccCCChhhhhhhhhhccCCccceeecCCceeeeee
Confidence 8888888888888775321 11111111 0112 14677889999999
Q ss_pred CCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCC
Q 019662 207 PGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDII 286 (337)
Q Consensus 207 ~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~ 286 (337)
.|...+....+..+|.+..-+.+||+++++...+|+.|.|++.++++++.+++.+++.|+...+.++|+..+.+....++
T Consensus 209 ~~~~~~~~~~~~~~~~~h~~~~~gD~~f~~~~y~~~~~~~k~~~~~~n~~~sl~~~~v~~~~e~~~~d~~~~~~~r~~~~ 288 (336)
T KOG0713|consen 209 RGDADGPEEIFELEGEPHIDGVPGDLFFKIVSYTHPRFERKGDDLYTNVTISLEAALVGFEMEILHLDGHYVEVSRKKIT 288 (336)
T ss_pred ecccCCceeeeeccCCcceecccCCceeeeEEecccceecCccchhhHHHHHHHHHHHHHHHHhhccchhhhhhhhhhcc
Confidence 99999999999999998888899999999999999999999999999999999999999999999999987788888899
Q ss_pred CCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC-CCH
Q 019662 287 SPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK-LTP 325 (337)
Q Consensus 287 ~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~-l~~ 325 (337)
.++..++.+++|||........|++|++|.+.+|.+ ++.
T Consensus 289 ~p~~~~~~~~~~~~~l~~~~~~~~~~~t~~~~~~~~~~~~ 328 (336)
T KOG0713|consen 289 WPGARTRKKGEGMPLLKNRNEKGNLYVTFDVEFPKSSLSD 328 (336)
T ss_pred ccchhhhhhhccchhhhccchhcceeEEecccCcccccch
Confidence 999999999999997766678999999999999965 454
No 35
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.96 E-value=2.1e-28 Score=227.18 Aligned_cols=218 Identities=29% Similarity=0.439 Sum_probs=143.3
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCCCC
Q 019662 4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSSS 83 (337)
Q Consensus 4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~~ 83 (337)
|||+||||+++|+.+|||+||++||++||||.|.+. +|.++|++|.+|||+|+|++||+.||++|..+...
T Consensus 44 d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~--~a~~kF~eI~~AYEiLsd~eKR~~YD~~~~~~~~~------- 114 (288)
T KOG0715|consen 44 DYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDK--EASKKFKEISEAYEILSDEEKRQEYDVYGLEQHGE------- 114 (288)
T ss_pred chhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCc--chhhHHHHHHHHHHHhcCHHHHHHHHHhhhhcccc-------
Confidence 899999999999999999999999999999999985 79999999999999999999999999998765110
Q ss_pred CCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCC-CCCCCCC--CccccccCCCCCcCCCCCCcCc-cccc-CCCCCCCC
Q 019662 84 GYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFG-FGSAGPG--KSTRFQSEGGGTFGGFGMGENI-FRTY-SDGSVPRK 158 (337)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~-~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~ 158 (337)
+. .++.++|..+|+++-+. ..+.... ....++.+. ++... .... ...-....
T Consensus 115 --------------~~-g~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~f~~A~--------~g~~~~~~~~~~~~~~t~~ 171 (288)
T KOG0715|consen 115 --------------FG-GNPFDVFLEFFGGKMNKRVPDKDQYYDLSLDFKEAV--------RGSKKRISFNVLSDCETCF 171 (288)
T ss_pred --------------cc-CCccchHHHhhcccccccccCcccccccccCHHHHh--------hccccceEEEeeccccccc
Confidence 00 15667777777651000 0000000 000111110 00000 0000 00000011
Q ss_pred CCCeeeeeeechhhhe----------------------eCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEE
Q 019662 159 PPPVESKLPCSLEELY----------------------SGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKIT 216 (337)
Q Consensus 159 ~~d~~~~l~vsl~e~~----------------------~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~ 216 (337)
+..........-+.+| .|....+.-.|..|.|+| .+...+.+.|.+|+|+.++.+|+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~~~~~c~~~~~~~~~~c~~~~g~~-~v~~~k~i~i~~~~g~~~~~~l~ 250 (288)
T KOG0715|consen 172 GSGAEEGAKRESCKTCSGRGLVSNPKEDPFILYTCSYCLGRGLVLRDNCQACSGAG-QVRRAKDIMIVLPAGVRSADTLR 250 (288)
T ss_pred CcCcccccccccchhhhCcccccccccCCcceeecccccccceeccchHHHhhcch-hhhhheeEEeecCcccccccEEE
Confidence 1111111111122222 222222222233445667 77888999999999999999999
Q ss_pred ECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEEEeeCHHH
Q 019662 217 FPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAE 261 (337)
Q Consensus 217 l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~e 261 (337)
+.+.|.. ||+|.+.|.+++.|+|+|.|+++...|++.+
T Consensus 251 ~~~~~~~-------~l~v~~~v~~~~~~~r~~~~i~~~~~i~~~~ 288 (288)
T KOG0715|consen 251 FAGHGND-------DLFVRLIVAKSPSFRREGKDILYDAIISFTQ 288 (288)
T ss_pred EecCCcc-------eEEEEEEeccCcccccccCcccccccccccC
Confidence 9998864 9999999999999999999999999998753
No 36
>KOG0714 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.95 E-value=3.2e-27 Score=220.02 Aligned_cols=294 Identities=51% Similarity=0.794 Sum_probs=215.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
|+.|||++|+|.++|+.++|++|||+||++||||+|+.+...++++|++|.+||++|+|+.+|..||+||++++.+....
T Consensus 1 ~~~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~~kr~~~d~~~~~~~~~~~~~ 80 (306)
T KOG0714|consen 1 MGKDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDPKKRKIYDQYGEEGLKGGGSF 80 (306)
T ss_pred CcccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCHHHhhhccccCccccccCCCC
Confidence 78999999999999999999999999999999999988633566689999999999999999999999999766541100
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhC-CCCCCCCCCCCC-CccccccCCCCCcCCCC-CCcCccc-cc---CCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFG-SSPFGFGSAGPG-KSTRFQSEGGGTFGGFG-MGENIFR-TY---SDG 153 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg-~~~f~~~~~~~~-~~~~~~~~~~~~~~~~~-~~~~~~~-~~---~~~ 153 (337)
.+.+... .+.+...++.++|.+||| .+++........ ................. ...+... .. ...
T Consensus 81 ----~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (306)
T KOG0714|consen 81 ----SSSFTSE---LFYFLFRKPDKDFYEFFGVSSPFSGSKKGYRDKNAAPGEEAFKSEGKAFQSLYGPKRKQYDSSGSD 153 (306)
T ss_pred ----CCCCCCC---cceeccCchhhhHHHHhCCCCCCccccccCCccccccCccccccccccccccCCCccccccccccc
Confidence 0001100 112333577899999999 455431100000 00000000000000000 0000000 00 001
Q ss_pred CCCCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCee-eecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccE
Q 019662 154 SVPRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQ-TPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADL 232 (337)
Q Consensus 154 ~~~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~-~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL 232 (337)
...++...+...+.+++++.+.|+.+...+.+......+.. ........+.+.+++..|+.+....+|+..++..+-++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 233 (306)
T KOG0714|consen 154 RSARQSPPVEHPLRVSLEDLYKGESKKMKISRQSFTSNGREGSSRSRYLSISIKPGWKEGTKITFPEEGDEEPGILPADI 233 (306)
T ss_pred ccccCCCCccCCcceeHHHhccccceeeecccccccCCcccccCccceeEEeccCCcccccceeccccccccCCcCccee
Confidence 11233344666677799999999999999998877666643 45667889999999999999999999998877778999
Q ss_pred EEEEEeeCCCccccCCCceEEE--EeeCHHHHhCCcEEEEecCCCcEEEEEcC-CCCCCCcEEEEcCCCcCC
Q 019662 233 VFVIDEKPHDVYKRDSNDLIVN--HKVSLAEALGGTSVSLITLDGRDLNIAVT-DIISPGFELGIPGEGMPI 301 (337)
Q Consensus 233 ~v~i~v~~~~~f~r~g~dL~~~--~~Isl~eAl~G~~~~i~~l~g~~~~v~i~-~~~~~g~~~rl~g~G~p~ 301 (337)
++.+..++|+.|.+.+.+|... ..|++.+|++|+...++++++..+.+.+. ..+.++...+++++|+|.
T Consensus 234 ~f~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (306)
T KOG0714|consen 234 EFVVDEKPHPLFSRDGNDLSYSSGYEISLKEALLGVTVFVPTLDGRSYSLSINKDLIEPGEEDVIPGEGLPC 305 (306)
T ss_pred EEEEecCCcccccCCCccceecccceeehhhhhcCcceeeecccCccccCcccccccCCCceeeecCCCCCC
Confidence 9999999999999999999999 99999999999999999999988877777 788999999999999985
No 37
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.88 E-value=1.5e-22 Score=153.80 Aligned_cols=81 Identities=47% Similarity=0.760 Sum_probs=70.5
Q ss_pred ceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCCCHHHHH
Q 019662 250 DLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKLTPEQRA 329 (337)
Q Consensus 250 dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l~~~~~~ 329 (337)
||+++++|||+||++|++++|+|+||+.++|++|+++++|++++|+|+|||...+++.+|||||+|+|.+|++||++|++
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l~g~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V~~P~~ls~~qk~ 80 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTLDGKTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEVEFPKKLSPEQKE 80 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-TTS-EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEEE--SSTSHHHHH
T ss_pred CeEEEEEeCHHHHhCCCEEEEECCCCCEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEEECCCCCCHHHhc
Confidence 79999999999999999999999999889999999999999999999999988755589999999999999999999987
Q ss_pred H
Q 019662 330 G 330 (337)
Q Consensus 330 ~ 330 (337)
|
T Consensus 81 l 81 (81)
T PF01556_consen 81 L 81 (81)
T ss_dssp H
T ss_pred C
Confidence 5
No 38
>KOG0716 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.82 E-value=7.5e-21 Score=169.92 Aligned_cols=72 Identities=57% Similarity=1.028 Sum_probs=68.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK 75 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 75 (337)
.|+|+||||+++|+.++||+|||+||++||||+++++ +++.++|++||.||+||+|+.+|..||.||+.++.
T Consensus 31 ~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~-P~~~dkf~eIN~Ay~ILsD~~kR~~YD~~g~~~l~ 102 (279)
T KOG0716|consen 31 LDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDN-PEATDKFKEINTAYAILSDPTKRNVYDEYGELGLK 102 (279)
T ss_pred hHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCC-chhHHHHHHHHHHHHHhcChhhhhhHHHhhhHHHH
Confidence 5799999999999999999999999999999999998 58999999999999999999999999999988765
No 39
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=99.81 E-value=1.6e-18 Score=154.50 Aligned_cols=225 Identities=27% Similarity=0.400 Sum_probs=144.6
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccc-ccccCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYG-EEGLKDMPP 79 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G-~~~~~~~~~ 79 (337)
|..+||+||||+++|+..||++|||++|++||||+++.+...+.++|+.|++||++|+|+.+|+.||+++ .........
T Consensus 4 ~~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~~~r~~yd~~~~~~~~~~~~~ 83 (237)
T COG2214 4 DLLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDPERRAEYDKIGADNYFPGKSY 83 (237)
T ss_pred hhhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCHHHHHHhhhhcccccCccccc
Confidence 4579999999999999999999999999999999999864248999999999999999999999999984 322211100
Q ss_pred CCCCCCCCCCCCCCCCCCCCC-CchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcC-cccccCCCCCCC
Q 019662 80 SSSSGYSYANGSGGNSKGFNP-RNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGEN-IFRTYSDGSVPR 157 (337)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~~~-~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 157 (337)
. . .. .+.... ....+++...++..... .... . ........ .... .... ............
T Consensus 84 ~-~--~~--------~~~~~~~~~~~~~~~~~~~~~~~~-~~~~-~-~~~~~~~~---~~~~-~~~~~~~~~~~~~~~~~ 145 (237)
T COG2214 84 R-E--SA--------AFPIEGSLQLTGLYEEWRGKRNKT-ERKA-S-LADLLSRG---LSGL-AAALSLFADEAALRSGS 145 (237)
T ss_pred c-c--cc--------cccccccccHHHHHHhhccccccc-cccc-c-hhhhcccc---cccc-ccccccccccccccccc
Confidence 0 0 00 011111 13455555555421100 0000 0 00000000 0000 0000 000000000000
Q ss_pred CCC-CeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEE
Q 019662 158 KPP-PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI 236 (337)
Q Consensus 158 ~~~-d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i 236 (337)
... +....+.+++.+++.+....+... .. ....+.+|.++..+..+++.+.+.... ...++.+..+
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 212 (237)
T COG2214 146 LRRRDLAANLADNFEEALAGVKKAVARL------LG------KALKSTIKAGALEGKALRLKGLLKSAR-GALGKARLKE 212 (237)
T ss_pred ccccceeeeeeccHHHHhcCcceeeecc------cc------ccccccCCcccccCceeeecccCCcCC-CCcccceeee
Confidence 111 577788889999998887766654 22 233489999999999999999998877 7789999999
Q ss_pred EeeCCCccccCCCceEEEEeeCH
Q 019662 237 DEKPHDVYKRDSNDLIVNHKVSL 259 (337)
Q Consensus 237 ~v~~~~~f~r~g~dL~~~~~Isl 259 (337)
.+++|+.|..++.++ .++.+
T Consensus 213 ~~~~~~~~~~~~~~~---~~~~~ 232 (237)
T COG2214 213 LSKRHPPFALEGDDK---YPVKL 232 (237)
T ss_pred eccCCCCccccCCcc---cccch
Confidence 999999999999998 44444
No 40
>KOG0717 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=4.1e-20 Score=175.25 Aligned_cols=78 Identities=49% Similarity=0.809 Sum_probs=73.2
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMP 78 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~ 78 (337)
|++.||+||||.++|++.+||++||+|||+||||+||...++|.++|+.|+.||+|||||+.|+-||.+-++.|.+..
T Consensus 6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp~eR~wyd~hreqil~~~~ 83 (508)
T KOG0717|consen 6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDPQERAWYDSHREQILRGKN 83 (508)
T ss_pred hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcChHhhhhHHHHHHHHhcCCC
Confidence 578999999999999999999999999999999999998889999999999999999999999999998887776543
No 41
>KOG0691 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.80 E-value=6.8e-20 Score=169.13 Aligned_cols=93 Identities=45% Similarity=0.815 Sum_probs=80.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSS 81 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~ 81 (337)
..|||++|||+.+|+.+||++|||+.|++||||+||+++ .|.++|+.+.+||+||+|+.+|+.||++|..+....
T Consensus 4 ~~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP-~A~ekFq~L~eAy~VL~D~~~R~~YDk~~k~~~~~~---- 78 (296)
T KOG0691|consen 4 DTDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDP-QAAEKFQELSEAYEVLSDEESRAAYDKLRKSGSSAQ---- 78 (296)
T ss_pred cchHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCCh-HHHHHHHHHHHHHHHhcCHHHHHHHHHHhhhcccch----
Confidence 479999999999999999999999999999999999996 599999999999999999999999999998654321
Q ss_pred CCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCC
Q 019662 82 SSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPF 116 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f 116 (337)
.+ .++.++|...|++..|
T Consensus 79 ---------------~~--~d~~~~~r~~f~~dl~ 96 (296)
T KOG0691|consen 79 ---------------GR--EDQADGFRKKFGSDLF 96 (296)
T ss_pred ---------------hh--hhHHHHHHHHhhhhhh
Confidence 01 3678888888886444
No 42
>KOG0718 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.79 E-value=7.4e-20 Score=173.60 Aligned_cols=73 Identities=56% Similarity=1.026 Sum_probs=68.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCC--CChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNP--NDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK 75 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~--~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 75 (337)
.|||.+|+|+++||.+||++|||++++-||||+.- +.++.|+++|+.|.+||||||||++|++||.||++|++
T Consensus 9 ~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~kRaIYD~~G~qGL~ 83 (546)
T KOG0718|consen 9 IELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQKRAIYDNYGEQGLK 83 (546)
T ss_pred hhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChHHHHHHHHhhhcccc
Confidence 58999999999999999999999999999999975 33467899999999999999999999999999999998
No 43
>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional
Probab=99.79 E-value=1.6e-19 Score=184.89 Aligned_cols=73 Identities=36% Similarity=0.675 Sum_probs=68.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD 76 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~ 76 (337)
.++||+||||+++||.++||+|||+||++||||+|+.+ .|.++|+.|++||+|||||.+|+.||+||..++..
T Consensus 572 d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~--~A~ekFq~I~EAYeVLSDp~kRk~YD~~G~~Gl~~ 644 (1136)
T PTZ00341 572 DTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGN--EGFHKFKKINEAYQILGDIDKKKMYNKFGYDGIKG 644 (1136)
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc--hHHHHHHHHHHHHHHhCCHHHHHHHhhccccccCC
Confidence 47999999999999999999999999999999999874 57889999999999999999999999999887653
No 44
>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []. Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....
Probab=99.76 E-value=8.4e-19 Score=127.04 Aligned_cols=64 Identities=48% Similarity=0.929 Sum_probs=60.5
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhh
Q 019662 4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYD 67 (337)
Q Consensus 4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD 67 (337)
|||+||||+++|+.++|++||+++++++|||+++.+...+.+.|..|++||++|+||.+|+.||
T Consensus 1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~~~R~~YD 64 (64)
T PF00226_consen 1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDPERRRRYD 64 (64)
T ss_dssp HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSHHHHHHHH
T ss_pred ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCHHHHHhcC
Confidence 6899999999999999999999999999999988764468999999999999999999999998
No 45
>KOG0719 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.74 E-value=1.7e-18 Score=151.35 Aligned_cols=72 Identities=44% Similarity=0.822 Sum_probs=65.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-hHHHHHHHHHHHHHHhhcCChhhhhhhhccccc
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-KKEAEARFKQISEAYEVLSDPQKRAIYDQYGEE 72 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~-~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~ 72 (337)
|-+|+|+||||.++|+..+|++|||+||++||||++++. ..+|.++|+.++.||.||+|.++|++||+.|.-
T Consensus 12 ~~~d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsDeekR~~YDetG~i 84 (264)
T KOG0719|consen 12 NKKDLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSDEEKRAVYDETGSI 84 (264)
T ss_pred cccCHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhHHHHHHHHhccCCC
Confidence 346999999999999999999999999999999999643 357899999999999999999999999998864
No 46
>KOG0624 consensus dsRNA-activated protein kinase inhibitor P58, contains TPR and DnaJ domains [Defense mechanisms]
Probab=99.71 E-value=1.6e-17 Score=153.24 Aligned_cols=72 Identities=53% Similarity=0.917 Sum_probs=64.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC--hHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND--KKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK 75 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~--~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 75 (337)
+|||+||||.++|+..||.+|||+||.+||||.-.+. .+.|+++|-.|..|-|||+||++|+.||. |++.+.
T Consensus 394 RDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~EkRrqFDn-GeDPLD 467 (504)
T KOG0624|consen 394 RDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDPEKRRQFDN-GEDPLD 467 (504)
T ss_pred chHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCHHHHhhccC-CCCCCC
Confidence 7999999999999999999999999999999986553 34689999999999999999999999997 565554
No 47
>PHA03102 Small T antigen; Reviewed
Probab=99.70 E-value=2.4e-17 Score=138.48 Aligned_cols=85 Identities=18% Similarity=0.336 Sum_probs=71.7
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCC
Q 019662 3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPS 80 (337)
Q Consensus 3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~ 80 (337)
+.+|+||||+++| |.++||+|||++|+++|||++++ .++|++|++||++|+|+.+|..||.+|.......
T Consensus 5 ~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~-----~e~~k~in~Ay~~L~d~~~r~~yd~~g~~~~~~~--- 76 (153)
T PHA03102 5 KELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGD-----EEKMKELNTLYKKFRESVKSLRDLDGEEDSSSEE--- 76 (153)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCch-----hHHHHHHHHHHHHHhhHHHhccccccCCcccccc---
Confidence 3579999999999 99999999999999999999864 4799999999999999999999999997643211
Q ss_pred CCCCCCCCCCCCCCCCCCCCCchhHHHHhhhCCC
Q 019662 81 SSSGYSYANGSGGNSKGFNPRNAEDIFAEFFGSS 114 (337)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~ 114 (337)
. ..+.++|..+||+.
T Consensus 77 ----------~---------~~~~~~f~~~fg~~ 91 (153)
T PHA03102 77 ----------E---------DVPSGYVGATFGDR 91 (153)
T ss_pred ----------c---------ccHHHHhhhhcCCc
Confidence 0 13678888888754
No 48
>smart00271 DnaJ DnaJ molecular chaperone homology domain.
Probab=99.68 E-value=9e-17 Score=114.69 Aligned_cols=59 Identities=66% Similarity=1.120 Sum_probs=54.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChh
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQ 61 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~ 61 (337)
+|||++|||+++++.++||+||++|++++|||+++...+.+.+.|..|++||++|+||.
T Consensus 1 ~~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~~ 59 (60)
T smart00271 1 TDYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDPE 59 (60)
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCCC
Confidence 58999999999999999999999999999999998533578999999999999999985
No 49
>KOG0721 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.65 E-value=1.6e-16 Score=137.90 Aligned_cols=70 Identities=39% Similarity=0.802 Sum_probs=65.3
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG 73 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 73 (337)
.|+|+||||+++||.+|||+|||+|+++||||++|.. ++.++.|..|++||+.|+|+..|..|..||+..
T Consensus 99 fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~-~~~e~~~~~I~KAY~aLTD~~sreN~ekYG~PD 168 (230)
T KOG0721|consen 99 FDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPE-EGDEEFFEAIAKAYQALTDKKSRENWEKYGNPD 168 (230)
T ss_pred CCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCc-chhHHHHHHHHHHHHHhcchhhHHHHHHhCCCC
Confidence 5999999999999999999999999999999999874 467889999999999999999999999999753
No 50
>cd06257 DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.
Probab=99.64 E-value=3.8e-16 Score=109.40 Aligned_cols=55 Identities=65% Similarity=1.138 Sum_probs=51.7
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCC
Q 019662 4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSD 59 (337)
Q Consensus 4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d 59 (337)
|||++|||+++++.++|++|||+|+++||||+++.. +.+.+.|..|++||++|+|
T Consensus 1 ~~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~-~~~~~~~~~l~~Ay~~L~d 55 (55)
T cd06257 1 DYYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDD-PEAEEKFKEINEAYEVLSD 55 (55)
T ss_pred ChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHhcC
Confidence 799999999999999999999999999999999864 4689999999999999986
No 51
>PRK01356 hscB co-chaperone HscB; Provisional
Probab=99.54 E-value=1e-14 Score=125.20 Aligned_cols=67 Identities=27% Similarity=0.427 Sum_probs=58.7
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK--KEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+.|||++|||++. ++..+|+++||+|+++||||++.... ..+.+.+..||+||++|+||.+|+.|+.
T Consensus 1 ~~~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp~~Ra~YlL 71 (166)
T PRK01356 1 MQNYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDALKRAEYML 71 (166)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 3799999999997 78999999999999999999986532 2345678999999999999999999985
No 52
>KOG0550 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.54 E-value=1.1e-14 Score=137.41 Aligned_cols=66 Identities=55% Similarity=0.965 Sum_probs=64.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+|||.||||.++|+..|||+|||++|+.||||+|..++.+++.+|++|.+||.+|+||.+|..||.
T Consensus 373 kd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~~kr~r~ds 438 (486)
T KOG0550|consen 373 KDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDPMKRVRFDS 438 (486)
T ss_pred hhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCHHHHhhccc
Confidence 699999999999999999999999999999999998878999999999999999999999999996
No 53
>PRK05014 hscB co-chaperone HscB; Provisional
Probab=99.53 E-value=1.4e-14 Score=124.97 Aligned_cols=66 Identities=32% Similarity=0.508 Sum_probs=58.3
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 3 MDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 3 ~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+|||++|||++. ++..+|+++||+|+++||||+..... ..+.+.|..||+||++|+||.+|+.|+-
T Consensus 1 ~~yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp~~Ra~Yll 72 (171)
T PRK05014 1 MDYFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHPLKRAEYLL 72 (171)
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCChhHHHHHHH
Confidence 489999999996 68899999999999999999975432 2367799999999999999999999984
No 54
>KOG0722 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.48 E-value=1.7e-14 Score=127.64 Aligned_cols=65 Identities=37% Similarity=0.699 Sum_probs=61.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcc
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQY 69 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 69 (337)
.|.|+||||+++|+.+||.+|||+||++||||++++ +++.+.|..|..||++|.|.+.|+.||-+
T Consensus 33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~--~e~k~~F~~iAtayeilkd~e~rt~ydya 97 (329)
T KOG0722|consen 33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRD--PESKKLFVKIATAYEILKDNETRTQYDYA 97 (329)
T ss_pred hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCC--chhhhhhhhhhcccccccchhhHHhHHHH
Confidence 589999999999999999999999999999999987 46779999999999999999999999953
No 55
>PRK03578 hscB co-chaperone HscB; Provisional
Probab=99.46 E-value=1.1e-13 Score=119.92 Aligned_cols=67 Identities=28% Similarity=0.418 Sum_probs=58.1
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
.+|||++|||++. ++..+|+++||+|+++||||+++... ..+.+.+..||+||++|+||.+|+.|+.
T Consensus 5 ~~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p~~Ra~Yll 77 (176)
T PRK03578 5 KDDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDPLKRARYLL 77 (176)
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCChhhHHHHHH
Confidence 4799999999995 68999999999999999999986532 1245567999999999999999999995
No 56
>PRK00294 hscB co-chaperone HscB; Provisional
Probab=99.45 E-value=1.8e-13 Score=118.09 Aligned_cols=67 Identities=28% Similarity=0.437 Sum_probs=59.5
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
..|||++|||++. .+..+|+++||+|+++||||++.... ..+.++|..||+||++|+||.+|+.|+-
T Consensus 3 ~~~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p~~Ra~YlL 75 (173)
T PRK00294 3 TPCHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSPPRRARYLL 75 (173)
T ss_pred CCChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 4799999999997 67899999999999999999986532 2467789999999999999999999995
No 57
>KOG0720 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=99.35 E-value=7.3e-13 Score=126.39 Aligned_cols=65 Identities=45% Similarity=0.646 Sum_probs=61.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
..|.|.+|||+.++|+++||+.||++|+-.|||||-. +.|+|.|+.++.|||+|+|+.+|..||.
T Consensus 234 ~~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~--~~A~Eafk~Lq~Afevig~~~kR~eYd~ 298 (490)
T KOG0720|consen 234 ILDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMI--PRAEEAFKKLQVAFEVIGDSVKRKEYDL 298 (490)
T ss_pred CCCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCC--hhHHHHHHHHHHHHHHhcchhhhhHHHH
Confidence 3699999999999999999999999999999999985 5799999999999999999999999997
No 58
>PTZ00100 DnaJ chaperone protein; Provisional
Probab=99.35 E-value=9.6e-13 Score=105.10 Aligned_cols=51 Identities=22% Similarity=0.462 Sum_probs=46.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcC
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLS 58 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~ 58 (337)
.++|++|||+++||.+||++|||+|++++|||++.+ .+.|++|++||++|.
T Consensus 65 ~eAy~ILGv~~~As~~eIkkaYRrLa~~~HPDkgGs-----~~~~~kIneAyevL~ 115 (116)
T PTZ00100 65 SEAYKILNISPTASKERIREAHKQLMLRNHPDNGGS-----TYIASKVNEAKDLLL 115 (116)
T ss_pred HHHHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHh
Confidence 479999999999999999999999999999998643 468899999999985
No 59
>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional
Probab=99.29 E-value=2.2e-12 Score=119.10 Aligned_cols=57 Identities=32% Similarity=0.567 Sum_probs=50.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------ChHHHHHHHHHHHHHHhhcCC
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPN------DKKEAEARFKQISEAYEVLSD 59 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~------~~~~~~~~f~~i~~Ay~~L~d 59 (337)
.++|++|||+++||.+|||+|||+|+++||||++.. ..+.++++|++|++||++|+.
T Consensus 200 ~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~ 262 (267)
T PRK09430 200 EDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKK 262 (267)
T ss_pred HhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Confidence 489999999999999999999999999999999632 124688999999999999975
No 60
>PHA02624 large T antigen; Provisional
Probab=99.25 E-value=5e-12 Score=126.35 Aligned_cols=59 Identities=24% Similarity=0.420 Sum_probs=55.3
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhh
Q 019662 3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIY 66 (337)
Q Consensus 3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~y 66 (337)
+++|++|||+++| +.++||+|||++|++||||++.+ .++|++|++||++|+|+.+|..|
T Consensus 11 ~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGd-----eekfk~Ln~AYevL~d~~k~~r~ 71 (647)
T PHA02624 11 KELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGD-----EEKMKRLNSLYKKLQEGVKSARQ 71 (647)
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCc-----HHHHHHHHHHHHHHhcHHHhhhc
Confidence 4799999999999 99999999999999999999743 57999999999999999999998
No 61
>PF01556 CTDII: DnaJ C terminal domain; InterPro: IPR002939 Molecular chaperones are a diverse family of proteins that function to protect proteins in the intracellular milieu from irreversible aggregation during synthesis and in times of cellular stress. The bacterial molecular chaperone DnaK is an enzyme that couples cycles of ATP binding, hydrolysis, and ADP release by an N-terminal ATP-hydrolizing domain to cycles of sequestration and release of unfolded proteins by a C-terminal substrate binding domain. Dimeric GrpE is the co-chaperone for DnaK, and acts as a nucleotide exchange factor, stimulating the rate of ADP release 5000-fold []. DnaK is itself a weak ATPase; ATP hydrolysis by DnaK is stimulated by its interaction with another co-chaperone, DnaJ. Thus the co-chaperones DnaJ and GrpE are capable of tightly regulating the nucleotide-bound and substrate-bound state of DnaK in ways that are necessary for the normal housekeeping functions and stress-related functions of the DnaK molecular chaperone cycle. Besides stimulating the ATPase activity of DnaK through its J-domain, DnaJ also associates with unfolded polypeptide chains and prevents their aggregation []. Thus, DnaK and DnaJ may bind to one and the same polypeptide chain to form a ternary complex. The formation of a ternary complex may result in cis-interaction of the J-domain of DnaJ with the ATPase domain of DnaK. An unfolded polypeptide may enter the chaperone cycle by associating first either with ATP-liganded DnaK or with DnaJ. DnaK interacts with both the backbone and side chains of a peptide substrate; it thus shows binding polarity and admits only L-peptide segments. In contrast, DnaJ has been shown to bind both L- and D-peptides and is assumed to interact only with the side chains of the substrate. This domain consists of the C-terminal region of the DnaJ protein. The function of this domain is unknown. It is found associated with IPR001623 from INTERPRO and IPR001305 from INTERPRO. ; GO: 0051082 unfolded protein binding, 0006457 protein folding; PDB: 2Q2G_A 2QLD_A 3AGX_A 3AGZ_A 3AGY_A 3I38_J 3LZ8_B 2B26_B 1C3G_A 1XAO_B ....
Probab=99.23 E-value=7.9e-12 Score=94.77 Aligned_cols=75 Identities=21% Similarity=0.386 Sum_probs=59.6
Q ss_pred CeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC--CCccEEEEEEe
Q 019662 161 PVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ--LPADLVFVIDE 238 (337)
Q Consensus 161 d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~--~~GDL~v~i~v 238 (337)
|++++++|+|.||+.|+++.+... +| +.++|.||+|+++|++++++|+|.+.... .+|||+|+++|
T Consensus 1 DL~~~~~I~l~~al~G~~i~i~~l------~g------~~~~i~ip~~~~~g~~~~i~g~G~p~~~~~~~~GdL~v~~~V 68 (81)
T PF01556_consen 1 DLYCTIPISLKEALLGGTISIPTL------DG------KTIKIKIPPGTQPGQQLRIKGKGMPKPKGGGKRGDLIVKFEV 68 (81)
T ss_dssp EEEEEEEEEHHHHHH-EEEEEE-T------TS-------EEEEEETST-STT-EEEETTESEEESSSTTSBEEEEEEEEE
T ss_pred CeEEEEEeCHHHHhCCCEEEEECC------CC------CEEEEeccCccCCCcEEeecCCCCCcCCCCCCcCCEEEEEEE
Confidence 578999999999999999988776 67 58999999999999999999999975333 69999999999
Q ss_pred eCCCccccC
Q 019662 239 KPHDVYKRD 247 (337)
Q Consensus 239 ~~~~~f~r~ 247 (337)
.-+..++.+
T Consensus 69 ~~P~~ls~~ 77 (81)
T PF01556_consen 69 EFPKKLSPE 77 (81)
T ss_dssp E--SSTSHH
T ss_pred ECCCCCCHH
Confidence 987776643
No 62
>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]
Probab=99.22 E-value=9.8e-12 Score=118.18 Aligned_cols=72 Identities=42% Similarity=0.772 Sum_probs=65.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----ChHHHHHHHHHHHHHHhhcCChhhhhhhhccccccc
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPN----DKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGL 74 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~----~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 74 (337)
.|+|+||||+.+++..+||++||+|++|+|||+-+. .+++-+++.++|++||+.|+|...|+.|-.||....
T Consensus 98 fDPyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k~renyl~yGtPd~ 173 (610)
T COG5407 98 FDPYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKKRRENYLNYGTPDS 173 (610)
T ss_pred CChHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHHHHHHHHhcCCCCC
Confidence 599999999999999999999999999999999764 356789999999999999999999999999997543
No 63
>PRK14282 chaperone protein DnaJ; Provisional
Probab=99.17 E-value=4.1e-11 Score=115.91 Aligned_cols=86 Identities=15% Similarity=0.219 Sum_probs=77.0
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~ 235 (337)
+++.|+++.++|||.||+.|+++.|.+. +| ++++|.||+|+++|++++|+|+|++.. +..+|||||+
T Consensus 273 r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~i~v~Ip~g~~~g~~iri~GkG~p~~~~~~~GDL~V~ 340 (369)
T PRK14282 273 RSGSDLIYDVTIDYLQAILGTTVEVPLP------EG------GTTMLKIPPGTQPETVFRLKGKGLPNMRYGRRGDLIVN 340 (369)
T ss_pred EecCCEEEEEEeCHHHHhCCCEEEEeCC------CC------cEEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 6789999999999999999999988875 66 468999999999999999999999864 3468999999
Q ss_pred EEeeCCCccccCCCceEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVN 254 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~ 254 (337)
|+|..|+.|++++.+|+.+
T Consensus 341 ~~v~~P~~l~~~~~~ll~~ 359 (369)
T PRK14282 341 VHVEIPKRLSREERKLLKE 359 (369)
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 9999999999999887654
No 64
>PRK01773 hscB co-chaperone HscB; Provisional
Probab=99.14 E-value=9.8e-11 Score=101.06 Aligned_cols=67 Identities=21% Similarity=0.293 Sum_probs=58.5
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPND----KKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+.|||++|||++. .+..+++++||+|.+++|||+.... +..+.+.-..||+||.+|+||.+|+.|=-
T Consensus 1 ~~nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdPl~RA~YLL 73 (173)
T PRK01773 1 MNNPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDPILRAEAII 73 (173)
T ss_pred CCChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCChHHHHHHHH
Confidence 4899999999996 8999999999999999999986443 23466778999999999999999999864
No 65
>PRK14294 chaperone protein DnaJ; Provisional
Probab=99.09 E-value=1.7e-10 Score=111.61 Aligned_cols=87 Identities=17% Similarity=0.250 Sum_probs=76.7
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 234 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v 234 (337)
.|.+.||+++++|||.+|+.|+++.|... +| .++|.||+|+++|++|+|+|+|++.++ ..+|||||
T Consensus 260 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~iri~G~G~p~~~~~~~GDL~V 326 (366)
T PRK14294 260 ERDGNDVHCKVPISFVQAALGAQIEVPTL------EG-------ERELKIPKGTQPGDIFRFKGKGIPSLRGGGRGDQII 326 (366)
T ss_pred eecCCCEEEEEEeCHHHHhCCCeEEEECC------CC-------cEEEEECCCcCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 46789999999999999999999988876 67 458999999999999999999998654 35899999
Q ss_pred EEEeeCCCccccCCCceEEEE
Q 019662 235 VIDEKPHDVYKRDSNDLIVNH 255 (337)
Q Consensus 235 ~i~v~~~~~f~r~g~dL~~~~ 255 (337)
+|+|..|+.|++++.+|+.++
T Consensus 327 ~~~v~~P~~l~~~q~~ll~~~ 347 (366)
T PRK14294 327 EVEVKVPTRLTKKQEELLTEF 347 (366)
T ss_pred EEEEECCCCCCHHHHHHHHHH
Confidence 999999999999888776553
No 66
>PRK14299 chaperone protein DnaJ; Provisional
Probab=99.09 E-value=1.3e-10 Score=108.92 Aligned_cols=86 Identities=10% Similarity=0.079 Sum_probs=75.8
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 235 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~ 235 (337)
.|++.||+++++|||.+|++|+++.|++. +| .++|.||+|+++|++++|+|+|.+..++.+|||+|+
T Consensus 197 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~~~v~ip~~~~~g~~~rl~g~G~p~~~~~~GDL~v~ 263 (291)
T PRK14299 197 RLEGDDLYATVDVPAPIAVVGGKVRVMTL------DG-------PVEVTIPPRTQAGRKLRLKGKGWPRGPAGRGDQYAE 263 (291)
T ss_pred EEECCEEEEEEecCHHHHhCCCEEEEECC------CC-------CEEEEeCCCcCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence 46789999999999999999999988876 67 589999999999999999999998655568999999
Q ss_pred EEeeCCCccccCCCceEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVN 254 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~ 254 (337)
++|..|+.++.++.+++..
T Consensus 264 ~~V~~P~~l~~~~~~~l~~ 282 (291)
T PRK14299 264 VRITIPTRPTPEEERLYKQ 282 (291)
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 9999999998888766543
No 67
>PRK14285 chaperone protein DnaJ; Provisional
Probab=99.07 E-value=1.9e-10 Score=111.10 Aligned_cols=86 Identities=17% Similarity=0.263 Sum_probs=76.2
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC-CCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~ 235 (337)
+.+.||++.++|||.+|+.|+++.|++. +| ++++|.||+|+++|++++|+|+|++.++. .+|||||+
T Consensus 263 R~G~dL~~~~~Isl~eAl~G~~~~i~tl------dG------~~v~V~Ip~g~~~g~~irl~GkG~p~~~~~~~GDL~V~ 330 (365)
T PRK14285 263 RNGKDLYATLPISFTQAALGKEIKIQTI------AS------KKIKIKIPKGTENDEQIIIKNEGMPILHTEKFGNLILI 330 (365)
T ss_pred EeccceEEEEecCHHHHhCCCEEEEECC------CC------CEEEEEeCCCcCCCcEEEECCCCccCCCCCCCCCEEEE
Confidence 5688999999999999999999999886 66 47899999999999999999999987554 46999999
Q ss_pred EEeeCCCccccCCCceEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVN 254 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~ 254 (337)
|+|..|+.|++++..|+.+
T Consensus 331 ~~v~~P~~l~~~q~~~l~~ 349 (365)
T PRK14285 331 IKIKTPKNLNSNAIKLLEN 349 (365)
T ss_pred EEEECCCCCCHHHHHHHHH
Confidence 9999999999888766544
No 68
>PRK14290 chaperone protein DnaJ; Provisional
Probab=99.07 E-value=2e-10 Score=110.94 Aligned_cols=86 Identities=14% Similarity=0.170 Sum_probs=76.7
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC-CCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~ 235 (337)
|.+.|+++.+.|||.+|+.|+.+.|.+. +| +++|.||+|+++|++|+|+|+|++.+++ .+|||||+
T Consensus 267 R~G~DL~~~~~Isl~eAl~G~~~~I~~~------~g-------~i~V~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~ 333 (365)
T PRK14290 267 RINDDLYVDQKINFPQAALGGEIEIKLF------RE-------KYNLKIPEGTQPGEVLKIKGAGMPHLNGHGSGDLLVR 333 (365)
T ss_pred EecCCEEEEEEeCHHHHhCCCEEEEEcC------Cc-------eEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence 5688999999999999999999988865 44 6899999999999999999999987543 58999999
Q ss_pred EEeeCCCccccCCCceEEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVNH 255 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~~ 255 (337)
|+|..|+.|++++.+|+.++
T Consensus 334 ~~V~~P~~l~~~~~~ll~~~ 353 (365)
T PRK14290 334 INVEVPKRLTSKQKELIREF 353 (365)
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 99999999999998887664
No 69
>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB. This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.
Probab=99.06 E-value=3.5e-10 Score=96.38 Aligned_cols=55 Identities=29% Similarity=0.460 Sum_probs=47.7
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCC----hHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 14 NATEDDLKKSYRKLAMKWHPDKNPND----KKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 14 ~a~~~~Ik~ayr~la~~~hPd~~~~~----~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+.+..+|+++||+|+++||||+.+.. +..+.+.|..||+||++|+||.+|+.|+-
T Consensus 2 ~iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p~~Ra~ylL 60 (157)
T TIGR00714 2 QLDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDPLMRAEYML 60 (157)
T ss_pred CCCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCChhhhHHHHH
Confidence 35789999999999999999985432 23477899999999999999999999996
No 70
>PRK10767 chaperone protein DnaJ; Provisional
Probab=99.03 E-value=3.7e-10 Score=109.45 Aligned_cols=86 Identities=14% Similarity=0.210 Sum_probs=76.3
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|.+.|++++++|||.+|+.|+++.|+.. +| .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus 259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~ 325 (371)
T PRK10767 259 RDGNDLYCEVPISFTTAALGGEIEVPTL------DG-------RVKLKIPEGTQTGKLFRLRGKGVKSVRSGARGDLYCQ 325 (371)
T ss_pred EecCCEEEEEEeCHHHHhCCCeEEEecC------CC-------cEEEEeCCCCCCCCEEEECCCCcCCCCCCCCCCEEEE
Confidence 5688999999999999999999988776 66 589999999999999999999998643 467999999
Q ss_pred EEeeCCCccccCCCceEEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVNH 255 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~~ 255 (337)
|+|..|+.|++++.+|+.++
T Consensus 326 ~~v~~P~~l~~~~~~ll~~l 345 (371)
T PRK10767 326 VVVETPVNLTKRQKELLEEF 345 (371)
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 99999999999998876654
No 71
>PRK14298 chaperone protein DnaJ; Provisional
Probab=99.03 E-value=3.4e-10 Score=109.71 Aligned_cols=86 Identities=16% Similarity=0.251 Sum_probs=75.9
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|.+.||++.+.|||.||+.|+++.|++. +| .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus 262 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~lri~g~G~p~~~~~~~GDL~V~ 328 (377)
T PRK14298 262 RVGDDIISEIPISFTQAALGADIMVPTL------YG-------KVKMNIPPGTQTHSVFRLKDKGMPRLHGHGKGDQLVK 328 (377)
T ss_pred EEcCcEEEEEEeCHHHHhCCCeEEEecC------CC-------CEEEEeCCCcccCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 5688999999999999999999988876 67 378999999999999999999998644 457999999
Q ss_pred EEeeCCCccccCCCceEEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVNH 255 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~~ 255 (337)
|+|..|+.|++++.+|+.++
T Consensus 329 ~~V~~P~~ls~~~~~ll~~l 348 (377)
T PRK14298 329 VIVKTPTKLTQEQKELLREF 348 (377)
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 99999999999888776554
No 72
>PRK14284 chaperone protein DnaJ; Provisional
Probab=99.02 E-value=5e-10 Score=109.18 Aligned_cols=87 Identities=14% Similarity=0.216 Sum_probs=75.0
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCC-CeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDAN-GRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLV 233 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~-G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~ 233 (337)
.|++.||+++++|||++|+.|+++.|... + | ..++|+||+|+++|++++|+|+|++..+ ..+||||
T Consensus 274 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------d~g------~~i~v~Ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~ 341 (391)
T PRK14284 274 ERRGDDLILELPIGFVDAALGMKKEIPTL------LKE------GTCRLTIPEGIQSGTILKVRGQGFPNVHGKGRGDLL 341 (391)
T ss_pred eeecCCEEEEEEecHHHHhCCCeEEEeec------CCC------cEEEEEECCccCCCeEEEECCCCCCCCCCCCCCcEE
Confidence 46789999999999999999999988865 3 2 3789999999999999999999998653 4689999
Q ss_pred EEEEeeCCCccccCCCceEEE
Q 019662 234 FVIDEKPHDVYKRDSNDLIVN 254 (337)
Q Consensus 234 v~i~v~~~~~f~r~g~dL~~~ 254 (337)
|+|+|..|+.++.++..|+.+
T Consensus 342 V~~~v~~P~~l~~~q~~ll~~ 362 (391)
T PRK14284 342 VRISVETPQNLSEEQKELLRQ 362 (391)
T ss_pred EEEEEECCCCCCHHHHHHHHH
Confidence 999999999888777666544
No 73
>PRK14279 chaperone protein DnaJ; Provisional
Probab=99.00 E-value=6.2e-10 Score=108.47 Aligned_cols=84 Identities=18% Similarity=0.250 Sum_probs=72.6
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 235 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~ 235 (337)
.|++.||++.++|||.+|+.|.++.|++. +| .++|+||+|+++|++|+|+|+|++..++.+|||||+
T Consensus 289 ~R~G~DL~~~~~Isl~eAl~G~~~~v~~l------dg-------~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~GDL~I~ 355 (392)
T PRK14279 289 GRDGDDLTVTVPVSFTELALGSTLSVPTL------DG-------PVGVKVPAGTADGRILRVRGRGVPKRSGGAGDLLVT 355 (392)
T ss_pred eeecCcEEEEEEccHHHHcCCceEEEEcC------Cc-------eEEEEECCCCCCCCEEEECCCCCCCCCCCCCCEEEE
Confidence 36788999999999999999999888776 56 489999999999999999999999766678999999
Q ss_pred EEeeCCCccccCCCceE
Q 019662 236 IDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~ 252 (337)
|+|.-++.+..+...|+
T Consensus 356 ~~v~~P~~Ls~~q~~~l 372 (392)
T PRK14279 356 VKVAVPPNLDGAAAEAL 372 (392)
T ss_pred EEEECCCCCCHHHHHHH
Confidence 99998887665554444
No 74
>PRK14287 chaperone protein DnaJ; Provisional
Probab=99.00 E-value=5.7e-10 Score=108.02 Aligned_cols=85 Identities=14% Similarity=0.246 Sum_probs=74.3
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|.+.|+++.+.|||.+|+.|+++.|.+. +| .++|+||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus 259 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~V~ 325 (371)
T PRK14287 259 RDGDDIYCEMPLTFPQVALGDEIEVPTL------NG-------KVKLKIPAGTQTGTSFRLRGKGVPNVHGRGQGDQHVQ 325 (371)
T ss_pred EecCCeEEEEeccHHHHhCCCEEEEEcC------CC-------CEEEEECCCccCCcEEEEcCCCccCCCCCCCCCEEEE
Confidence 6789999999999999999999988876 66 479999999999999999999998643 457999999
Q ss_pred EEeeCCCccccCCCceEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVN 254 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~ 254 (337)
|+|..|+.++++...|+.+
T Consensus 326 ~~v~~P~~l~~~q~~ll~~ 344 (371)
T PRK14287 326 VRVVTPKNLTEKEKELMRE 344 (371)
T ss_pred EEEEcCCCCCHHHHHHHHH
Confidence 9999999988877665544
No 75
>PRK14301 chaperone protein DnaJ; Provisional
Probab=98.99 E-value=7e-10 Score=107.45 Aligned_cols=86 Identities=14% Similarity=0.180 Sum_probs=74.3
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 234 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v 234 (337)
.+.+.|++++++|||.+|+.|+++.|+.. +| .++|.||+|+++|++++|+|+|++.++ ..+|||||
T Consensus 260 ~r~G~DL~~~~~Isl~eAl~G~~~~v~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~I 326 (373)
T PRK14301 260 QRQGQDLVVTQEISFVQAALGDRIEVPTL------DD-------PVTLDIPKGTQSGEVFRLRGKGLPYLGSSQKGDLLV 326 (373)
T ss_pred eeecCcEEEEEEecHHHHhCCCeEEEecC------Cc-------cEEEEECCCcCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 46789999999999999999999988876 66 489999999999999999999999754 45899999
Q ss_pred EEEeeCCCccccCCCceEEE
Q 019662 235 VIDEKPHDVYKRDSNDLIVN 254 (337)
Q Consensus 235 ~i~v~~~~~f~r~g~dL~~~ 254 (337)
+|+|..|+.++.+..+++.+
T Consensus 327 ~~~V~~P~~l~~~q~~~l~~ 346 (373)
T PRK14301 327 EVSVVTPTKLTKRQEELLRE 346 (373)
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 99999998887776655443
No 76
>PRK14288 chaperone protein DnaJ; Provisional
Probab=98.99 E-value=7.1e-10 Score=107.27 Aligned_cols=85 Identities=14% Similarity=0.264 Sum_probs=74.1
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC-CCccEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVF 234 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v 234 (337)
.|.+.||++.++|||.||++|+++.|+.. +| +.++|.||+|+++|++++|+|+|++.++. .+|||||
T Consensus 254 ~R~G~DL~~~~~Isl~eAllG~~i~v~tL------dG------~~l~i~i~~~~~~g~~~~i~g~G~p~~~~~~~GDL~v 321 (369)
T PRK14288 254 KREGCDLFIEAPVFFTTIALGHTIKVPSL------KG------DELELKIPRNARDRQTFAFRNEGVKHPESSYRGSLIV 321 (369)
T ss_pred EEeCCEEEEEEecCHHHHhcCCEEEeecC------CC------CEEEEEeCCCCCCCcEEEEcCCCCCCCCCCCCCCEEE
Confidence 36789999999999999999999999887 77 46899999999999999999999997554 4699999
Q ss_pred EEEeeCCCccccCCCceE
Q 019662 235 VIDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 235 ~i~v~~~~~f~r~g~dL~ 252 (337)
+|+|..|+.|+.+...++
T Consensus 322 ~~~v~~P~~ls~~q~~~l 339 (369)
T PRK14288 322 ELQVIYPKSLNKEQQELL 339 (369)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999999988877665443
No 77
>TIGR02349 DnaJ_bact chaperone protein DnaJ. This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.
Probab=98.98 E-value=8e-10 Score=106.50 Aligned_cols=83 Identities=16% Similarity=0.281 Sum_probs=72.9
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC-CCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ-LPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~-~~GDL~v~ 235 (337)
+++.|+++.+.|||.||+.|+++.|... +| .++|.||+|+++|++++|+|+|++.+++ .+|||||+
T Consensus 264 r~g~DL~~~~~isl~eAl~G~~~~i~~l------dG-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~i~ 330 (354)
T TIGR02349 264 RDGNDLYIEVPISFTQAILGGEIEVPTL------DG-------DVKLKIPAGTQSGTVFRLKGKGVPRLRGNGRGDLLVT 330 (354)
T ss_pred EecCCEEEEEEeCHHHHhCCCeEEEecC------Cc-------eEEEEECCcccCCcEEEECCCCcCCCCCCCCCCEEEE
Confidence 5688999999999999999999888776 66 6899999999999999999999986543 68999999
Q ss_pred EEeeCCCccccCCCceE
Q 019662 236 IDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~ 252 (337)
|+|..|+.+++++.+++
T Consensus 331 ~~v~~P~~l~~~~~~~l 347 (354)
T TIGR02349 331 VKVETPKNLSKEQKELL 347 (354)
T ss_pred EEEECCCCCCHHHHHHH
Confidence 99999998887776543
No 78
>PRK14300 chaperone protein DnaJ; Provisional
Probab=98.98 E-value=8.4e-10 Score=106.91 Aligned_cols=84 Identities=15% Similarity=0.297 Sum_probs=73.0
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|++.|+++.+.|+|.+|+.|+++.|.+. +| +.++|.||+|+++|++|+|+|+|++.++ ..+|||||+
T Consensus 262 R~G~Dl~~~~~Isl~~Al~G~~~~i~~l------dg------~~i~v~Ip~g~~~g~~iri~g~G~p~~~~~~~GDL~V~ 329 (372)
T PRK14300 262 VDGANLHCKLPISFVNAALGGEIEVPVI------EG------GKVNLTIPAGTQNGDQLRLRSKGMSKMRSTIRGDMLTH 329 (372)
T ss_pred EecCCEEEEEecCHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCcEEEECCCCCCCCCCCCCCCEEEE
Confidence 6788999999999999999999998876 55 4799999999999999999999998654 468999999
Q ss_pred EEeeCCCccccCCCceE
Q 019662 236 IDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~ 252 (337)
|+|..|..|+-+...++
T Consensus 330 ~~v~~P~~ls~~qk~~l 346 (372)
T PRK14300 330 IHVEVPKNLSKRQRELL 346 (372)
T ss_pred EEEECCCCCCHHHHHHH
Confidence 99999988776665444
No 79
>PRK14295 chaperone protein DnaJ; Provisional
Probab=98.98 E-value=8.5e-10 Score=107.40 Aligned_cols=85 Identities=15% Similarity=0.277 Sum_probs=73.2
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI 236 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i 236 (337)
|.+.||+++++|||.+|+.|+++.|+.. +| +.++|+||+|+++|++|+|+|+|++..++.+|||||+|
T Consensus 283 R~G~DL~~~~~Isl~eAl~G~~~~I~tl------dG------~~~~v~ip~g~~~g~~iri~G~G~p~~~~~~GDL~i~~ 350 (389)
T PRK14295 283 RSGDNLTVTVPVTFPEAALGAEVRVPTL------GG------PPVTVKLPPGTPNGRVLRVRGKGAVRKDGTRGDLLVTV 350 (389)
T ss_pred EecCCEEEEEeecHHHHhCCCeEEEECC------CC------CEEEEEECCccCCCcEEEECCCCcCCCCCCCCCEEEEE
Confidence 6788999999999999999999888765 66 47899999999999999999999987666789999999
Q ss_pred EeeCCCccccCCCceEE
Q 019662 237 DEKPHDVYKRDSNDLIV 253 (337)
Q Consensus 237 ~v~~~~~f~r~g~dL~~ 253 (337)
+|.-+..++.+...|+.
T Consensus 351 ~v~~P~~Ls~~qk~~l~ 367 (389)
T PRK14295 351 EVAVPKDLSGKAREALE 367 (389)
T ss_pred EEECCCCCCHHHHHHHH
Confidence 99988776655554443
No 80
>KOG1150 consensus Predicted molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.95 E-value=1.1e-09 Score=94.19 Aligned_cols=64 Identities=34% Similarity=0.714 Sum_probs=59.3
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhh
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAI 65 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~ 65 (337)
+-|+|+||.|.+..+.++||+.||+|++-.|||+||++.+.|...|.-|.+||..|-|+.-|..
T Consensus 52 nLNpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n~~~rkr 115 (250)
T KOG1150|consen 52 NLNPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLENDKIRKR 115 (250)
T ss_pred ccChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhCHHHHHH
Confidence 4589999999999999999999999999999999999988899999999999999999885543
No 81
>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]
Probab=98.94 E-value=1.2e-09 Score=103.78 Aligned_cols=85 Identities=15% Similarity=0.252 Sum_probs=74.7
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCC-CCCCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQ-PNQLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~-~~~~~GDL~v~ 235 (337)
|.+.||+++++|++.+|.+|.++.+++. +| .++|+||||++.|++++|+|+|++. .+...|||||+
T Consensus 261 R~g~dL~~~~~Is~~~AalG~~i~vptl------~g-------~~~l~ip~Gtq~G~~~rl~gkG~p~~~~~~~GDl~v~ 327 (371)
T COG0484 261 RDGDDLYCEVPISFTEAALGGEIEVPTL------DG-------RVKLKIPAGTQTGEVFRLRGKGMPKLRSGGRGDLYVR 327 (371)
T ss_pred ECCCceEeccccCHHHHhcCCEEEEEec------CC-------CEEEecCCCCccCcEEEEcCCCccccCCCCcCCEEEE
Confidence 5678999999999999999999999987 77 4899999999999999999999996 45557999999
Q ss_pred EEeeCCCccccCCCceEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVN 254 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~ 254 (337)
|+|..+..+......|+.+
T Consensus 328 v~v~~P~~ls~~q~~lL~~ 346 (371)
T COG0484 328 VKVETPKNLSDEQKELLEE 346 (371)
T ss_pred EEEEcCCCCCHHHHHHHHH
Confidence 9999999887776665543
No 82
>PRK14286 chaperone protein DnaJ; Provisional
Probab=98.93 E-value=1.6e-09 Score=104.95 Aligned_cols=85 Identities=14% Similarity=0.143 Sum_probs=73.3
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|.+.||++.+.|+|.+|++|+++.|... +| +.++|+||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus 267 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG------~~i~v~ip~g~~~g~~~ri~G~G~P~~~~~~~GDL~V~ 334 (372)
T PRK14286 267 RQGNDLILVRKISLAQAILGAEIEVPTI------DG------KKAKMKIPEGTESGQVFRLKGHGMPYLGAYGKGDQHVI 334 (372)
T ss_pred EecCCEEEEEEECHHHHhCCCEEEEeCC------CC------CEEEEEeCCccCCCcEEEECCCCCCCCCCCCCCcEEEE
Confidence 6788999999999999999999888876 67 4689999999999999999999998643 457999999
Q ss_pred EEeeCCCccccCCCceEE
Q 019662 236 IDEKPHDVYKRDSNDLIV 253 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~ 253 (337)
|+|.-|+.++.+..+|+.
T Consensus 335 ~~V~~P~~Ls~~qk~~l~ 352 (372)
T PRK14286 335 VKIEIPKKITRRQRELIE 352 (372)
T ss_pred EEEECCCCCCHHHHHHHH
Confidence 999998877766655543
No 83
>PRK14293 chaperone protein DnaJ; Provisional
Probab=98.92 E-value=1.4e-09 Score=105.57 Aligned_cols=87 Identities=16% Similarity=0.221 Sum_probs=76.1
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCC--CCccEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQ--LPADLV 233 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~--~~GDL~ 233 (337)
.+++.|+++.++|||.+|+.|+++.|.+. +| .++|.||+|+++|++++|+|+|.+.++. ..||||
T Consensus 263 ~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dG-------~~~i~ip~~~~~g~~~ri~g~G~p~~~~~~~~GDL~ 329 (374)
T PRK14293 263 RRDGINILSEIKISYLQAILGDTLEVDTV------DG-------PVELTIPAGTQPNTVLTLENKGVPRLGNPVARGDHL 329 (374)
T ss_pred ChhhhceEEEeccCHHHHhCCCEEEecCC------CC-------CEEEEeCCCCCCCCEEEECCCCCCCCCCCCCcCCEE
Confidence 35678999999999999999999999887 67 3689999999999999999999986543 479999
Q ss_pred EEEEeeCCCccccCCCceEEEE
Q 019662 234 FVIDEKPHDVYKRDSNDLIVNH 255 (337)
Q Consensus 234 v~i~v~~~~~f~r~g~dL~~~~ 255 (337)
|+|+|..|+.+++++.+|+.++
T Consensus 330 v~~~v~~P~~l~~~~~~l~~~l 351 (374)
T PRK14293 330 ITVKVKIPTRISDEERELLEKL 351 (374)
T ss_pred EEEEEECCCCCCHHHHHHHHHH
Confidence 9999999999999888776543
No 84
>PRK10266 curved DNA-binding protein CbpA; Provisional
Probab=98.92 E-value=1.8e-09 Score=102.06 Aligned_cols=82 Identities=16% Similarity=0.152 Sum_probs=70.9
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 235 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~ 235 (337)
.+.+.|++++++|||.+|++|+++.|... +| .++|+||+|+++|++++|+|+|++.++ .+|||||+
T Consensus 205 ~r~g~DL~~~~~Isl~~al~G~~~~i~~~------~g-------~v~v~ip~g~~~g~~~ri~g~G~p~~~-~~GdL~v~ 270 (306)
T PRK10266 205 DIVGQDLEIVVPLAPWEAALGAKVTVPTL------KE-------SILLTIPPGSQAGQRLRVKGKGLVSKK-QTGDLYAV 270 (306)
T ss_pred EEeCCceEEEEecCHHHHhCCCEEEeeCC------Cc-------cEEEEeCCCcCCCCEEEECCCCCCCCC-CCCCEEEE
Confidence 35688999999999999999999988775 55 479999999999999999999998654 57999999
Q ss_pred EEeeCCCccccCCCce
Q 019662 236 IDEKPHDVYKRDSNDL 251 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL 251 (337)
++|..|+.+.-+...|
T Consensus 271 ~~v~~P~~l~~~q~~l 286 (306)
T PRK10266 271 LKIVMPPKPDEKTAAL 286 (306)
T ss_pred EEEECCCCCCHHHHHH
Confidence 9999998876555443
No 85
>PRK14276 chaperone protein DnaJ; Provisional
Probab=98.91 E-value=2e-09 Score=104.59 Aligned_cols=84 Identities=15% Similarity=0.222 Sum_probs=71.9
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 234 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v 234 (337)
.|.+.||++.++|||.||+.|+++.|.+. +| .++|.||+|+++|++++|+|+|++..+ ..+|||||
T Consensus 266 ~R~G~DL~~~~~Isl~eAl~G~~~~v~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 332 (380)
T PRK14276 266 ERDGSTIYYTLPISFVQAALGDTVEVPTV------HG-------DVELKIPAGTQTGKKFRLRGKGAPKLRGGGNGDQHV 332 (380)
T ss_pred eeecceEEEEEecCHHHHhCCCeEEEEcC------CC-------cEEEEECCCCCCCCEEEECCCCcCCCCCCCCCCEEE
Confidence 36788999999999999999999988876 66 479999999999999999999999754 45799999
Q ss_pred EEEeeCCCccccCCCceE
Q 019662 235 VIDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 235 ~i~v~~~~~f~r~g~dL~ 252 (337)
+|+|.-+..++.+...++
T Consensus 333 ~~~v~~P~~l~~~q~~~l 350 (380)
T PRK14276 333 TVNIVTPTKLNDAQKEAL 350 (380)
T ss_pred EEEEECCCCCCHHHHHHH
Confidence 999998887765554443
No 86
>PRK14280 chaperone protein DnaJ; Provisional
Probab=98.90 E-value=2.5e-09 Score=103.72 Aligned_cols=83 Identities=14% Similarity=0.244 Sum_probs=71.2
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|.+.||++.+.|||.||+.|+++.|... +| .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus 264 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~v~ 330 (376)
T PRK14280 264 RDGDDIYCEMPLTFAQAALGDEIEVPTL------HG-------KVKLKIPAGTQTGTQFRLKGKGVPNVRGYGQGDQYVV 330 (376)
T ss_pred EecCCEEEEEecCHHHHhCCCEEEEecC------Cc-------eEEEEECCCCCCCcEEEEcCCCCCCCCCCCCCCEEEE
Confidence 6789999999999999999999988876 66 479999999999999999999998643 458999999
Q ss_pred EEeeCCCccccCCCceE
Q 019662 236 IDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~ 252 (337)
|+|..++.++.+...++
T Consensus 331 ~~v~~P~~Ls~~q~~~l 347 (376)
T PRK14280 331 VRVVTPTKLTDRQKELL 347 (376)
T ss_pred EEEECCCCCCHHHHHHH
Confidence 99998877665554443
No 87
>PRK14281 chaperone protein DnaJ; Provisional
Probab=98.89 E-value=2.6e-09 Score=104.36 Aligned_cols=83 Identities=17% Similarity=0.228 Sum_probs=71.3
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|++.||+++++|||.+|+.|+++.|.+. +| .++|+||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus 283 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dg-------~i~v~ip~g~~~G~~~ri~g~G~P~~~~~~~GDL~V~ 349 (397)
T PRK14281 283 RNGDDVIYNLAVSYPDLVLGTKVEVPTL------DG-------AVKLTIPAGTQPETMLRIPGKGIGHLRGSGRGDQYVR 349 (397)
T ss_pred EecCCEEEEEEecHHHHhcCCeEEeecC------Cc-------cEEEEeCCccCCCcEEEEcCCCCCCCCCCCCCCEEEE
Confidence 6788999999999999999999988876 66 478999999999999999999998643 457999999
Q ss_pred EEeeCCCccccCCCceE
Q 019662 236 IDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~ 252 (337)
|+|.-+..++.+...|+
T Consensus 350 ~~V~~P~~Ls~~qk~~l 366 (397)
T PRK14281 350 VNVFVPKEVSHQDKELL 366 (397)
T ss_pred EEEEcCCCCCHHHHHHH
Confidence 99998877665554443
No 88
>PRK14291 chaperone protein DnaJ; Provisional
Probab=98.88 E-value=6.8e-09 Score=100.96 Aligned_cols=75 Identities=21% Similarity=0.310 Sum_probs=66.8
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 234 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v 234 (337)
.+.+.||++.+.|||+||+.|+++.|++. +| +.++|.||+|+++|++|+|+|+|++.++ ..+|||||
T Consensus 271 ~r~G~DL~~~~~Isl~eAl~G~~~~i~~l------dG------~~l~V~Ip~g~~~G~~i~i~G~G~p~~~~~~~GDL~V 338 (382)
T PRK14291 271 ERRGDNLYLDVNITVAEAVLGTELEVPLL------DG------KKEKVKIPPGTKEGDKIRVPGKGMPRLKGSGYGDLVV 338 (382)
T ss_pred eeecCCeEEEEEeeHHHHhCCCEEEEecC------CC------CEEEEEECCccCCCCEEEECCCCCCCCCCCCCCCEEE
Confidence 36789999999999999999999999886 67 4689999999999999999999998654 45899999
Q ss_pred EEEeeCCC
Q 019662 235 VIDEKPHD 242 (337)
Q Consensus 235 ~i~v~~~~ 242 (337)
+|+|.-+.
T Consensus 339 ~~~V~~P~ 346 (382)
T PRK14291 339 RVHIDVPK 346 (382)
T ss_pred EEEEEeCC
Confidence 99999775
No 89
>PRK14297 chaperone protein DnaJ; Provisional
Probab=98.86 E-value=3.5e-09 Score=102.95 Aligned_cols=83 Identities=16% Similarity=0.148 Sum_probs=70.9
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|.+.|+++.++|||.+|+.|+++.|.+. +| .++|.||+|+++|++++|+|+|.+..+ ..+|||||+
T Consensus 269 R~G~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~ 335 (380)
T PRK14297 269 RKGFDIYIDKHISFAKAALGTEIKVPTV------DG-------EVKYEVPAGTQPGTVFRLKGKGVPRVNSTGRGNQYVT 335 (380)
T ss_pred EeCCCEEEEEEeCHHHHhCCCcEEEEcC------CC-------cEEEEECCCcCCCCEEEEcCCCcCCCCCCCCCcEEEE
Confidence 5788999999999999999999988876 66 479999999999999999999998643 457999999
Q ss_pred EEeeCCCccccCCCceE
Q 019662 236 IDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~ 252 (337)
|+|.-+..++.+...++
T Consensus 336 ~~v~~P~~ls~~q~~~l 352 (380)
T PRK14297 336 VIVDIPKKLNSKQKEAL 352 (380)
T ss_pred EEEEcCCCCCHHHHHHH
Confidence 99998877665554443
No 90
>PRK14278 chaperone protein DnaJ; Provisional
Probab=98.85 E-value=4.9e-09 Score=101.79 Aligned_cols=85 Identities=15% Similarity=0.188 Sum_probs=71.4
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVF 234 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v 234 (337)
.|++.||++.++|+|.+|+.|+.+.|... ++ ..++|.||+|+++|++++|+|+|++.. +..+|||||
T Consensus 259 ~R~G~DL~~~~~Isl~eAl~G~~~~i~tl------d~------~~i~v~ip~g~~~g~~lrl~g~G~p~~~~~~~GDL~V 326 (378)
T PRK14278 259 VRDGDDLHCTVSVPMVDAALGTTVTVEAI------LD------GPSEITIPPGTQPGSVITLRGRGMPHLRSGGRGDLHA 326 (378)
T ss_pred EEcCCCEEEEEecCHHHHhcCCeEEEecC------CC------CeEEEEeCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 36789999999999999999999888865 33 378999999999999999999999864 345899999
Q ss_pred EEEeeCCCccccCCCceE
Q 019662 235 VIDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 235 ~i~v~~~~~f~r~g~dL~ 252 (337)
+|+|.-+..++.+...++
T Consensus 327 ~~~V~~P~~Ls~~qk~~l 344 (378)
T PRK14278 327 HVEVVVPTRLDHEDIELL 344 (378)
T ss_pred EEEEEcCCCCCHHHHHHH
Confidence 999998876665554444
No 91
>PRK14296 chaperone protein DnaJ; Provisional
Probab=98.84 E-value=4.8e-09 Score=101.61 Aligned_cols=83 Identities=13% Similarity=0.136 Sum_probs=70.6
Q ss_pred CC-CCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC--CCCCccEE
Q 019662 157 RK-PPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP--NQLPADLV 233 (337)
Q Consensus 157 ~~-~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~--~~~~GDL~ 233 (337)
|+ +.||+++++|||.||++|+++.|+.. +| .++|.||+|+++|++++|+|+|++.. .+..||||
T Consensus 270 R~~G~DL~~~~~Isl~eAllG~~~~i~tl------dG-------~~~v~ip~~t~~g~~~ri~GkGmP~~~~~~~~GDL~ 336 (372)
T PRK14296 270 IINNNDILMTYNISYLDAILGNEIIIKTL------DG-------DIKYKLPKSINSNELIIINNKGLYKSINKDKRGDLI 336 (372)
T ss_pred EeCCCcEEEEEecCHHHHhCCCEEEeeCC------CC-------CEEEEECCccCCCcEEEEcCCCCCcCCCCCCcCCEE
Confidence 43 78999999999999999999999887 77 37899999999999999999999842 34579999
Q ss_pred EEEEeeCCCccccCCCceE
Q 019662 234 FVIDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 234 v~i~v~~~~~f~r~g~dL~ 252 (337)
|+|+|.-++.++.+...|+
T Consensus 337 V~~~V~~P~~Ls~~q~~~l 355 (372)
T PRK14296 337 IKVNIVVPKNLSKKEKELI 355 (372)
T ss_pred EEEEEECCCCCCHHHHHHH
Confidence 9999998877766555443
No 92
>PRK14292 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=4.3e-09 Score=102.06 Aligned_cols=85 Identities=14% Similarity=0.179 Sum_probs=73.1
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVF 234 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v 234 (337)
.+.+.|++..+.|+|.||+.|+.+.|... +| ..+|.||+|+++|++++|+|+|++.. +..+|||||
T Consensus 258 ~r~g~dL~~~~~isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~~i~g~G~p~~~~~~~GDL~V 324 (371)
T PRK14292 258 RREQEHLIYEARIGFAKAALGGQITVPTL------DG-------PQVIEVKPGTQHGDLHRLRGQGMPRLQGAGTGDLIV 324 (371)
T ss_pred ccchhceeEEeccCHHHHhCCCeEEEECC------CC-------CEEEecCCCcCCCcEEEECCCCCCCCCCCCCCCEEE
Confidence 46788999999999999999999998876 67 23699999999999999999999864 445899999
Q ss_pred EEEeeCCCccccCCCceEE
Q 019662 235 VIDEKPHDVYKRDSNDLIV 253 (337)
Q Consensus 235 ~i~v~~~~~f~r~g~dL~~ 253 (337)
+|+|..|+.++.+...|+.
T Consensus 325 ~~~v~~P~~l~~~q~~ll~ 343 (371)
T PRK14292 325 EYEIAVPKQLSPEAREALE 343 (371)
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 9999999988877665554
No 93
>PRK14277 chaperone protein DnaJ; Provisional
Probab=98.83 E-value=6e-09 Score=101.49 Aligned_cols=83 Identities=16% Similarity=0.238 Sum_probs=70.8
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
|.+.||+++++|||.||++|+++.|+.. +| .++|.||+|+++|++++|+|+|++..+ ..+|||||+
T Consensus 276 R~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~~~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v~ 342 (386)
T PRK14277 276 REGYNVYLEMPITFTDAALGGEIEIPTL------DG-------KVKFTIPEGTQTGTKFRLRGKGIPHLRGRGRGDQIVK 342 (386)
T ss_pred EecCCEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEEECCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 5688999999999999999999988876 77 379999999999999999999998643 357999999
Q ss_pred EEeeCCCccccCCCceE
Q 019662 236 IDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~ 252 (337)
|+|.-+..++.+..+++
T Consensus 343 ~~V~~P~~Ls~~qk~~l 359 (386)
T PRK14277 343 VYIEVPKKLTEKQKELL 359 (386)
T ss_pred EEEEeCCCCCHHHHHHH
Confidence 99998876665554444
No 94
>PTZ00037 DnaJ_C chaperone protein; Provisional
Probab=98.80 E-value=6.6e-09 Score=101.88 Aligned_cols=85 Identities=15% Similarity=0.178 Sum_probs=71.8
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCC--CCCcc
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPN--QLPAD 231 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~--~~~GD 231 (337)
.|.+.||+++++|||.+|++|+++.|+.. +| +.++|+|||| +++|++++|+|+|++..+ ..+||
T Consensus 270 ~R~G~DL~~~~~Isl~eAllG~~i~I~tL------dG------~~l~I~ip~g~vt~pg~~~~I~geGmP~~~~~~~rGD 337 (421)
T PTZ00037 270 KREGGDLFITKKISLYEALTGFVFYITHL------DG------RKLLVNTPPGEVVKPGDIKVINNEGMPTYKSPFKKGN 337 (421)
T ss_pred EEeCCeEEEEEeCCHHHHhcCCEEEeeCC------CC------CeEEEEeCCCcccCCCcEEEeCCCCcccCCCCCCCCC
Confidence 36789999999999999999999988877 77 4689999999 999999999999998643 35799
Q ss_pred EEEEEEeeCC--CccccCCCceE
Q 019662 232 LVFVIDEKPH--DVYKRDSNDLI 252 (337)
Q Consensus 232 L~v~i~v~~~--~~f~r~g~dL~ 252 (337)
|||+|+|.-+ ..++.+...|+
T Consensus 338 L~V~~~V~~P~~~~Ls~~qk~ll 360 (421)
T PTZ00037 338 LYVTFEVIFPVDRKFTNEEKEIL 360 (421)
T ss_pred EEEEEEEEcCCCCCCCHHHHHHH
Confidence 9999999988 66665554433
No 95
>PRK14283 chaperone protein DnaJ; Provisional
Probab=98.80 E-value=9e-09 Score=100.00 Aligned_cols=84 Identities=14% Similarity=0.192 Sum_probs=70.7
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVFV 235 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v~ 235 (337)
+.+.|+++++.|||.+|+.|+.+.|.+. +| .++|.||+|+++|++++|+|+|.+..+ ..+|||||+
T Consensus 267 r~G~DL~~~~~Isl~eAl~G~~~~i~tl------dG-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GdL~v~ 333 (378)
T PRK14283 267 REGANLYYEKPISFVQAALGDTVDVPTI------DG-------PVELKIPAGTQSGTTFRLKGHGMPSLRWSGKGNLYVK 333 (378)
T ss_pred EecCCEEEEEecCHHHHhcCCeEEEEcC------Cc-------eEEEEeCCCCCCCCEEEECCCCCCCCCCCCCCCEEEE
Confidence 5688999999999999999999888865 66 589999999999999999999998643 468999999
Q ss_pred EEeeCCCccccCCCceEE
Q 019662 236 IDEKPHDVYKRDSNDLIV 253 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~ 253 (337)
|+|.-++.++.+...|+.
T Consensus 334 ~~v~~P~~l~~~q~~ll~ 351 (378)
T PRK14283 334 VKVVVPKKLSPKQKELLR 351 (378)
T ss_pred EEEEeCCCCCHHHHHHHH
Confidence 999987766655544443
No 96
>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]
Probab=98.76 E-value=1.5e-08 Score=91.05 Aligned_cols=68 Identities=35% Similarity=0.526 Sum_probs=58.1
Q ss_pred CCcccccCCCC---CCCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHhhcCChhhhhhhhccc
Q 019662 3 MDYYNILKVNK---NATEDDLKKSYRKLAMKWHPDKNPNDK-KEAEARFKQISEAYEVLSDPQKRAIYDQYG 70 (337)
Q Consensus 3 ~~~y~iLgv~~---~a~~~~Ik~ayr~la~~~hPd~~~~~~-~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G 70 (337)
.|+|.+|||+. .|++.+|.+|.++.+.+||||+..... ....+-|+.|+.||+||+|+.+|..||..-
T Consensus 43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~~R~qyDS~d 114 (379)
T COG5269 43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRKLRLQYDSND 114 (379)
T ss_pred hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHHHHhhccccc
Confidence 58999999986 789999999999999999999862110 235689999999999999999999999743
No 97
>PRK14289 chaperone protein DnaJ; Provisional
Probab=98.74 E-value=1.6e-08 Score=98.63 Aligned_cols=82 Identities=15% Similarity=0.197 Sum_probs=69.8
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC-CCCccEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN-QLPADLVF 234 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~-~~~GDL~v 234 (337)
.+.+.|+++.+.|+|.+|+.|+.+.|.+. +| .++|.||+|+++|++++|+|+|.+.++ ..+|||||
T Consensus 274 ~r~g~DL~~~~~Isl~eAl~G~~~~i~~l------dg-------~i~v~ip~g~~~g~~~ri~g~G~p~~~~~~~GDL~v 340 (386)
T PRK14289 274 IRDENDLIYNLLLSVPTAALGGAVEVPTI------DG-------KAKVKIEAGTQPGKVLRLRNKGLPSVNGYGTGDLLV 340 (386)
T ss_pred cccccceeEEeccCHHHHhCCCeEEeecC------Cc-------eEEEEECCccCCCcEEEECCCCcCCCCCCCCCcEEE
Confidence 35678999999999999999999998886 56 579999999999999999999998643 46899999
Q ss_pred EEEeeCCCccccCCCc
Q 019662 235 VIDEKPHDVYKRDSND 250 (337)
Q Consensus 235 ~i~v~~~~~f~r~g~d 250 (337)
+|+|.-+..++.+...
T Consensus 341 ~~~v~~P~~l~~~q~~ 356 (386)
T PRK14289 341 NVSVYIPETLSKEEKQ 356 (386)
T ss_pred EEEEEeCCCCCHHHHH
Confidence 9999987666554443
No 98
>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ. This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.
Probab=98.64 E-value=5.4e-08 Score=99.09 Aligned_cols=69 Identities=49% Similarity=0.941 Sum_probs=64.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG 73 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 73 (337)
+|||+||||+++|+.++||+|||+||++||||+++. +.+.++|++|++||++|+|+.+|+.||+||..+
T Consensus 2 ~DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~--~eAeekFqeINEAYEVLSDP~KRa~YD~fG~aG 70 (871)
T TIGR03835 2 RDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKA--PDAASIFAEINEANDVLSNPKKRANYDKYGHDG 70 (871)
T ss_pred CChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHhCCHHHHHHHhhhcccc
Confidence 699999999999999999999999999999999986 467889999999999999999999999988654
No 99
>KOG1789 consensus Endocytosis protein RME-8, contains DnaJ domain [Intracellular trafficking, secretion, and vesicular transport; Posttranslational modification, protein turnover, chaperones]
Probab=98.46 E-value=1.8e-07 Score=97.12 Aligned_cols=51 Identities=39% Similarity=0.685 Sum_probs=44.6
Q ss_pred CcccccCCCCCC----CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcC
Q 019662 4 DYYNILKVNKNA----TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLS 58 (337)
Q Consensus 4 ~~y~iLgv~~~a----~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~ 58 (337)
+-|+||.|+-+- ..+.||++|++||++|||||||+ ..++|..+|+|||.|+
T Consensus 1282 ~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPE----GRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1282 LAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPE----GREMFERVNKAYELLS 1336 (2235)
T ss_pred HHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCch----HHHHHHHHHHHHHHHH
Confidence 469999998543 45889999999999999999985 4689999999999998
No 100
>KOG0568 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.43 E-value=1.5e-07 Score=82.88 Aligned_cols=54 Identities=35% Similarity=0.674 Sum_probs=49.1
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHh-hcCC
Q 019662 4 DYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYE-VLSD 59 (337)
Q Consensus 4 ~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~-~L~d 59 (337)
.||++|||..+|+.++++.||..||+++|||...+ +...+.|.+|.+||. ||+.
T Consensus 48 e~fril~v~e~~~adevr~af~~lakq~hpdsgs~--~adaa~f~qideafrkvlq~ 102 (342)
T KOG0568|consen 48 ECFRILGVEEGADADEVREAFHDLAKQVHPDSGSE--EADAARFIQIDEAFRKVLQE 102 (342)
T ss_pred HHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCc--cccHHHHHHHHHHHHHHHHH
Confidence 58999999999999999999999999999999876 356789999999998 7764
No 101
>KOG0723 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=98.00 E-value=9e-06 Score=63.25 Aligned_cols=49 Identities=27% Similarity=0.411 Sum_probs=42.7
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCh
Q 019662 7 NILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60 (337)
Q Consensus 7 ~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~ 60 (337)
.||||+++++.+.||+|+|++....|||+..++ -.=.+||||+++|...
T Consensus 60 lIL~v~~s~~k~KikeaHrriM~~NHPD~GGSP-----YlAsKINEAKdlLe~~ 108 (112)
T KOG0723|consen 60 LILGVTPSLDKDKIKEAHRRIMLANHPDRGGSP-----YLASKINEAKDLLEGT 108 (112)
T ss_pred HHhCCCccccHHHHHHHHHHHHHcCCCcCCCCH-----HHHHHHHHHHHHHhcc
Confidence 489999999999999999999999999999764 2335799999999753
No 102
>KOG0712 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=97.69 E-value=0.0001 Score=69.55 Aligned_cols=74 Identities=24% Similarity=0.293 Sum_probs=66.0
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCCCCCccEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQLPADLVF 234 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~~~~GDL~v 234 (337)
|++.++.+.+.++|.|+..|..+.+... +| +.+++.++|| +.+|++++++|+|++......|||||
T Consensus 249 Rrg~dL~~~~~i~l~eal~G~~~~~~~l------dG------r~l~~~~~pg~vi~~~~~~~v~~~gmp~~~~~~g~lyi 316 (337)
T KOG0712|consen 249 RRGSDLYRKLTISLVEALCGFQRVWETL------DG------RLLKLSSKPGEVISPGDTKRVEGEGMPIFRNPKGDLYI 316 (337)
T ss_pred ecccccceeeecchhhccccceEEEEcc------CC------ceEEEecCCCceeChhHEEeecCCCcccccCCCCcEEE
Confidence 5688999999999999999988888755 77 5899999999 99999999999999975555999999
Q ss_pred EEEeeCCC
Q 019662 235 VIDEKPHD 242 (337)
Q Consensus 235 ~i~v~~~~ 242 (337)
.++|+-++
T Consensus 317 ~~~v~fp~ 324 (337)
T KOG0712|consen 317 KFEVKFPK 324 (337)
T ss_pred EEEEEcCC
Confidence 99999776
No 103
>KOG3192 consensus Mitochondrial J-type chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=97.04 E-value=0.00072 Score=56.43 Aligned_cols=66 Identities=29% Similarity=0.556 Sum_probs=52.7
Q ss_pred CCcccccCCCC--CCCHHHHHHHHHHHHHHhCCCCCC----CChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 3 MDYYNILKVNK--NATEDDLKKSYRKLAMKWHPDKNP----NDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 3 ~~~y~iLgv~~--~a~~~~Ik~ayr~la~~~hPd~~~----~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
++||.++|... ...+..+..-|.-..+++|||+.. .+...|.+...++|+||.+|.||-+|+.|=.
T Consensus 8 ~~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~pL~RA~Yil 79 (168)
T KOG3192|consen 8 SRFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDPLARARYLL 79 (168)
T ss_pred HHHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 57999986654 456777777899999999999832 1223578889999999999999999999864
No 104
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.36 E-value=0.002 Score=55.83 Aligned_cols=55 Identities=36% Similarity=0.583 Sum_probs=46.4
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---C---hHHHHHHHHHHHHHHhhc
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPN---D---KKEAEARFKQISEAYEVL 57 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~---~---~~~~~~~f~~i~~Ay~~L 57 (337)
.+.|.+|++...++..+|+++|+++...+|||+-.. . -+.+.+++++|++||+.+
T Consensus 113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~ 173 (174)
T COG1076 113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI 173 (174)
T ss_pred hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence 478999999999999999999999999999997321 1 146788999999999853
No 105
>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]
Probab=96.13 E-value=0.0043 Score=53.84 Aligned_cols=65 Identities=29% Similarity=0.460 Sum_probs=51.0
Q ss_pred CcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 4 DYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 4 ~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
||....+..+.+ ..+.++..|+.+++++|||+..... ..+.+.+..++.||.+|.||-+|+.|=.
T Consensus 2 ~~~~~~~~~~~f~~~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~~l~ra~~~l 72 (174)
T COG1076 2 DGFVLFGLPRAFQIDLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKDPLLRAEYLL 72 (174)
T ss_pred CcccccccHHHHHHHHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHHHHHHHHHHH
Confidence 455566666654 4566889999999999999975432 2355789999999999999999998864
No 106
>KOG0431 consensus Auxilin-like protein and related proteins containing DnaJ domain [General function prediction only]
Probab=94.51 E-value=0.051 Score=54.12 Aligned_cols=47 Identities=34% Similarity=0.446 Sum_probs=33.8
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh------HHHHHHHHHHHHHHhh
Q 019662 10 KVNKNATEDDLKKSYRKLAMKWHPDKNPNDK------KEAEARFKQISEAYEV 56 (337)
Q Consensus 10 gv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~------~~~~~~f~~i~~Ay~~ 56 (337)
.+..=.+.++||+||||..+..||||-+... -.|++.|..+.+|+..
T Consensus 395 sltDLVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~eawn~ 447 (453)
T KOG0431|consen 395 SLTDLVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALSEAWNK 447 (453)
T ss_pred chhhccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHHHHHHh
Confidence 4445569999999999999999999976531 1345556666666543
No 107
>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []. In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.
Probab=91.91 E-value=0.32 Score=39.83 Aligned_cols=52 Identities=23% Similarity=0.295 Sum_probs=37.5
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhh
Q 019662 6 YNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQK 62 (337)
Q Consensus 6 y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~ 62 (337)
..||+|++..+.++|.+.|.+|-...+|++... .-.=.+|..|.|.|..+.+
T Consensus 61 ~~ILnv~~~~~~eeI~k~y~~Lf~~Nd~~kGGS-----fYLQSKV~rAKErl~~El~ 112 (127)
T PF03656_consen 61 RQILNVKEELSREEIQKRYKHLFKANDPSKGGS-----FYLQSKVFRAKERLEQELK 112 (127)
T ss_dssp HHHHT--G--SHHHHHHHHHHHHHHT-CCCTS------HHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCccCHHHHHHHHHHHHhccCCCcCCC-----HHHHHHHHHHHHHHHHHHH
Confidence 469999999999999999999999999998764 3344578889988875543
No 108
>PF13446 RPT: A repeated domain in UCH-protein
Probab=88.63 E-value=1.1 Score=31.74 Aligned_cols=26 Identities=15% Similarity=0.420 Sum_probs=23.6
Q ss_pred CcccccCCCCCCCHHHHHHHHHHHHH
Q 019662 4 DYYNILKVNKNATEDDLKKSYRKLAM 29 (337)
Q Consensus 4 ~~y~iLgv~~~a~~~~Ik~ayr~la~ 29 (337)
+-|+.|||+++++.+.|-.+|+....
T Consensus 6 ~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~ 31 (62)
T PF13446_consen 6 EAYEILGIDEDTDDDFIISAFQSKVN 31 (62)
T ss_pred HHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence 35899999999999999999999777
No 109
>TIGR02642 phage_xxxx uncharacterized phage protein. This uncharacterized protein is found in prophage regions of Shewanella oneidensis MR-1, Vibrio vulnificus YJ016, Yersinia pseudotuberculosis IP 32953, and Aeromonas hydrophila ATCC7966. It appears to have regions of sequence similarity to phage lambda antitermination protein Q.
Probab=86.21 E-value=0.5 Score=41.31 Aligned_cols=46 Identities=11% Similarity=0.044 Sum_probs=38.0
Q ss_pred hhheeCceEEEE--EEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEEC
Q 019662 171 EELYSGSTRKMK--ISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFP 218 (337)
Q Consensus 171 ~e~~~G~~~~i~--~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~ 218 (337)
+..|.|..+.+. -.|..|+|+| .+..++...+.+ .|+.+|++|++.
T Consensus 102 C~~C~G~G~~i~~~~~C~~C~G~G-~v~~~~~~~~k~-~g~~~g~~it~~ 149 (186)
T TIGR02642 102 CPRCRGTGLIQRRQRECDTCAGTG-RFRPTVEDLLKS-FGVDSGAAIVLK 149 (186)
T ss_pred CCCCCCeeEEecCCCCCCCCCCcc-EEeeeEEEEEEe-eeccCCceeeHH
Confidence 456888888886 4688889999 677778888999 999999999875
No 110
>KOG0724 consensus Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains [Posttranslational modification, protein turnover, chaperones]
Probab=83.67 E-value=1 Score=43.06 Aligned_cols=55 Identities=36% Similarity=0.538 Sum_probs=43.2
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCC---ChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 14 NATEDDLKKSYRKLAMKWHPDKNPN---DKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 14 ~a~~~~Ik~ayr~la~~~hPd~~~~---~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
-++..+|+.+|+..++.+||++-.. .....++.|++|.+||++|.+..+|..+|.
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~i~ka~~i~~~~~~~~t~~~ 60 (335)
T KOG0724|consen 3 LASEDELRLAYREMALKSHPEKKSFYEKLSLWTEEEFKKIEKALAILDDDEPRRTPDS 60 (335)
T ss_pred cccHHHHHHHHHHHhhhcCcHHHHHHHHhhhhHHHHHHHHHHHHHHHhccccccchhh
Confidence 3678899999999999999998741 112567889999999999998666555554
No 111
>PF11833 DUF3353: Protein of unknown function (DUF3353); InterPro: IPR021788 This family of proteins are functionally uncharacterised. This protein is found in bacteria and eukaryotes. Proteins in this family are typically between 205 to 258 amino acids in length.
Probab=80.17 E-value=3.5 Score=36.37 Aligned_cols=39 Identities=21% Similarity=0.422 Sum_probs=30.0
Q ss_pred CCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhh-cCC
Q 019662 12 NKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEV-LSD 59 (337)
Q Consensus 12 ~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~-L~d 59 (337)
+++||.+||.+|+.++..+|--| ++.-.+|..||+. |++
T Consensus 1 S~~ASfeEIq~Arn~ll~~y~gd---------~~~~~~IEaAYD~ILM~ 40 (194)
T PF11833_consen 1 SEDASFEEIQAARNRLLAQYAGD---------EKSREAIEAAYDAILME 40 (194)
T ss_pred CCCCCHHHHHHHHHHHHHHhcCC---------HHHHHHHHHHHHHHHHH
Confidence 57999999999999999998322 2445578899985 444
No 112
>PF14687 DUF4460: Domain of unknown function (DUF4460)
Probab=80.02 E-value=3 Score=33.38 Aligned_cols=47 Identities=26% Similarity=0.480 Sum_probs=35.4
Q ss_pred CCCCHHHHHHHHHHHHHHhCCCC---CCCChHHHHHHHHHHHHHHhhcCC
Q 019662 13 KNATEDDLKKSYRKLAMKWHPDK---NPNDKKEAEARFKQISEAYEVLSD 59 (337)
Q Consensus 13 ~~a~~~~Ik~ayr~la~~~hPd~---~~~~~~~~~~~f~~i~~Ay~~L~d 59 (337)
+..+..+++.|.|.+-++.|||. +|..++..++-++.++.-.+.|..
T Consensus 4 r~~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~Ne~SLk~Ln~~Ld~l~~ 53 (112)
T PF14687_consen 4 RNLSSPDLRSALRPFYFAVHPDLFGQHPEEKQVNEESLKLLNSYLDSLKK 53 (112)
T ss_pred hhhhhHHHHHHHHHHHHHhCCcccccChHHHHhhHHHHHHHHHHHHHHhc
Confidence 45677899999999999999995 454444456667777777777764
No 113
>COG5552 Uncharacterized conserved protein [Function unknown]
Probab=74.23 E-value=14 Score=27.10 Aligned_cols=38 Identities=13% Similarity=0.226 Sum_probs=31.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPN 38 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~ 38 (337)
|-+|.-++.++++-|+..||+.|-++.++|..=-..|+
T Consensus 1 MCRNIk~LfnfdPPAT~~EvrdAAlQfVRKlSGtT~PS 38 (88)
T COG5552 1 MCRNIKELFNFDPPATPVEVRDAALQFVRKLSGTTHPS 38 (88)
T ss_pred CccchHHHhCCCCCCCcHHHHHHHHHHHHHhcCCCCcc
Confidence 66777888999999999999999999888875555544
No 114
>PF10041 DUF2277: Uncharacterized conserved protein (DUF2277); InterPro: IPR018735 Members of this family of hypothetical bacterial proteins have no known function.
Probab=58.64 E-value=46 Score=24.62 Aligned_cols=56 Identities=14% Similarity=0.207 Sum_probs=38.7
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHH----HHHHHHHhhcC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARF----KQISEAYEVLS 58 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f----~~i~~Ay~~L~ 58 (337)
|=+|--.+-++.+-|+.+||..|-.+.++|..=-..|.. ...+.| .+|..|-.-|.
T Consensus 1 MCRnI~~L~~fePpaT~~EI~aAAlQyVRKvSG~~~Ps~--an~eaF~~AV~eva~at~~LL 60 (78)
T PF10041_consen 1 MCRNIKTLRNFEPPATDEEIRAAALQYVRKVSGFRKPSA--ANAEAFDRAVAEVAAATRRLL 60 (78)
T ss_pred CCcchhhhcCCCCCCCHHHHHHHHHHHHHHHccCCCcch--hhHHHHHHHHHHHHHHHHHHH
Confidence 556666777999999999999999999998866665542 233444 34555444343
No 115
>PF07709 SRR: Seven Residue Repeat; InterPro: IPR011714 This repeat is found in some Plasmodium and Theileria proteins.
Probab=55.09 E-value=7.6 Score=18.98 Aligned_cols=13 Identities=46% Similarity=0.897 Sum_probs=10.0
Q ss_pred HHHHHHHHHhhcC
Q 019662 46 RFKQISEAYEVLS 58 (337)
Q Consensus 46 ~f~~i~~Ay~~L~ 58 (337)
+|..+..||+.|+
T Consensus 2 ~~~~V~~aY~~l~ 14 (14)
T PF07709_consen 2 KFEKVKNAYEQLS 14 (14)
T ss_pred cHHHHHHHHHhcC
Confidence 5778888888774
No 116
>PF12991 DUF3875: Domain of unknown function, B. Theta Gene description (DUF3875); InterPro: IPR024451 This domain of unknown function is found in proteins from Bacteroidetes, including the conjugation system ATPase, TraG.
Probab=53.88 E-value=16 Score=25.15 Aligned_cols=25 Identities=24% Similarity=0.604 Sum_probs=19.2
Q ss_pred CCCcEEEEEEEECCCC--CCHHHHHHH
Q 019662 307 NRGDLRIKFEVKFPTK--LTPEQRAGL 331 (337)
Q Consensus 307 ~~GdL~v~~~v~~P~~--l~~~~~~~l 331 (337)
..||+.|-|+|.+|+- +|.++-+.+
T Consensus 26 k~gDiTv~f~v~LPEiFtls~~eYea~ 52 (54)
T PF12991_consen 26 KNGDITVAFRVELPEIFTLSEAEYEAI 52 (54)
T ss_pred cCCCEEEEEEecCCeeEEechhHhHHh
Confidence 5799999999999995 455555443
No 117
>PF12434 Malate_DH: Malate dehydrogenase enzyme
Probab=43.03 E-value=28 Score=20.35 Aligned_cols=17 Identities=24% Similarity=0.589 Sum_probs=14.6
Q ss_pred HHHHHHHHHHHHHHhCC
Q 019662 17 EDDLKKSYRKLAMKWHP 33 (337)
Q Consensus 17 ~~~Ik~ayr~la~~~hP 33 (337)
.++.+.+.|+.|+.||-
T Consensus 10 ~~~~r~~lR~AALeYHe 26 (28)
T PF12434_consen 10 KEDKRAQLRQAALEYHE 26 (28)
T ss_pred hHHHHHHHHHHHHHhcc
Confidence 47788899999999994
No 118
>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]
Probab=35.86 E-value=1.1e+02 Score=26.02 Aligned_cols=71 Identities=25% Similarity=0.252 Sum_probs=59.8
Q ss_pred ceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCCC
Q 019662 250 DLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTKL 323 (337)
Q Consensus 250 dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~l 323 (337)
++...+.++..+++.+....+.-.......+.++.+...+..+++.+++.... ...++++.++.+......
T Consensus 150 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 220 (237)
T COG2214 150 DLAANLADNFEEALAGVKKAVARLLGKALKSTIKAGALEGKALRLKGLLKSAR---GALGKARLKELSKRHPPF 220 (237)
T ss_pred ceeeeeeccHHHHhcCcceeeeccccccccccCCcccccCceeeecccCCcCC---CCcccceeeeeccCCCCc
Confidence 78889999999999999888888777655578899999999999999998755 467999999888776544
No 119
>KOG0315 consensus G-protein beta subunit-like protein (contains WD40 repeats) [General function prediction only]
Probab=33.96 E-value=29 Score=31.88 Aligned_cols=29 Identities=21% Similarity=0.342 Sum_probs=24.5
Q ss_pred EEeeCHHHHhCC-cEEEEecCCCcEEEEEc
Q 019662 254 NHKVSLAEALGG-TSVSLITLDGRDLNIAV 282 (337)
Q Consensus 254 ~~~Isl~eAl~G-~~~~i~~l~g~~~~v~i 282 (337)
..+|-|+||+.| |..+|++.|+..-++.|
T Consensus 19 DhTIRfWqa~tG~C~rTiqh~dsqVNrLei 48 (311)
T KOG0315|consen 19 DHTIRFWQALTGICSRTIQHPDSQVNRLEI 48 (311)
T ss_pred cceeeeeehhcCeEEEEEecCccceeeEEE
Confidence 468999999999 79999999997655665
No 120
>PF07739 TipAS: TipAS antibiotic-recognition domain; InterPro: IPR012925 TipAL is a bacterial transcriptional regulator of the MerR family. The tipA gene can be expressed as a long form, TipAL, and a short form, TipAS, which constitutes the C-terminal part of TipAL. TipAS forms the antibiotic-recognition domain []. This domain, which has an alpha-helical globin-like fold, is also found at the C terminus of other MerR family transcription factors, including Mta, a central regulator of multidrug resistance in Bacillus subtilis [], and SkgA from Caulobacter crescentus []. ; GO: 0003677 DNA binding, 0045892 negative regulation of transcription, DNA-dependent; PDB: 1NY9_A 3HH0_A 3QAO_A.
Probab=33.10 E-value=1.1e+02 Score=23.66 Aligned_cols=52 Identities=19% Similarity=0.482 Sum_probs=31.5
Q ss_pred CCCCCC-CHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhh-cccc
Q 019662 10 KVNKNA-TEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYD-QYGE 71 (337)
Q Consensus 10 gv~~~a-~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD-~~G~ 71 (337)
|+++++ .-.++-+.++.++..+++ . ..+.+..+.+.| +.||.-+..|| .++.
T Consensus 51 g~~p~s~evq~l~~~~~~~~~~~~~---~-----~~~~~~~l~~~y--~~~~~~~~~~~~~~~~ 104 (118)
T PF07739_consen 51 GVDPDSPEVQELAERWMELINQFTG---G-----DPELLRGLAQMY--VEDPRFAAMYDKKFGP 104 (118)
T ss_dssp T--TT-HHHHHHHHHHHHHHHHSS-----------HHHHHHHHHHT--TSTHHHHHHHG-GGST
T ss_pred CCCcCCHHHHHHHHHHHHHHHHHhC---C-----CHHHHHHHHHHH--HcCHHHHhhccccCCH
Confidence 445544 333466666666666666 1 235778888888 78888888888 5553
No 121
>PF06675 DUF1177: Protein of unknown function (DUF1177); InterPro: IPR009561 This family consists of several hypothetical archaeal and bacterial proteins of around 300 residues in length. The function of this family is unknown.
Probab=31.15 E-value=1.4e+02 Score=27.53 Aligned_cols=90 Identities=18% Similarity=0.293 Sum_probs=58.3
Q ss_pred CCccEEEEEEeeCCCccccCCCceEEEEeeCHHHHhC-------CcEEEEecCCCcEEE----EEcCCCCCCCcEEEEcC
Q 019662 228 LPADLVFVIDEKPHDVYKRDSNDLIVNHKVSLAEALG-------GTSVSLITLDGRDLN----IAVTDIISPGFELGIPG 296 (337)
Q Consensus 228 ~~GDL~v~i~v~~~~~f~r~g~dL~~~~~Isl~eAl~-------G~~~~i~~l~g~~~~----v~i~~~~~~g~~~rl~g 296 (337)
.+||++|.-++.||---+.-.-=-++..+|++.++.. -.-++|.|-.|+.+. +.|.+.++.|+++|++-
T Consensus 79 L~GDVii~ThIcp~Apt~PH~PvpFM~sPv~~~~~n~~EV~p~mdAILSiDTTKGNRiin~~GfAisPtvKeGyILrvse 158 (276)
T PF06675_consen 79 LPGDVIITTHICPDAPTRPHDPVPFMGSPVDMATMNRHEVDPEMDAILSIDTTKGNRIINHRGFAISPTVKEGYILRVSE 158 (276)
T ss_pred cCCcEEEEEecCCCCCCCCCCCcccccCccCHHHHHHhhcCcccceEEEEecCCCceeeccCCeEecccccceEEEEcCH
Confidence 3699999999998754443333345667777766553 235788888886542 34678899999999976
Q ss_pred CCcCCCCCCCCCCcEEEEEEEEC
Q 019662 297 EGMPIAREPGNRGDLRIKFEVKF 319 (337)
Q Consensus 297 ~G~p~~~~~~~~GdL~v~~~v~~ 319 (337)
.=+.... ...|.+-+.|-|..
T Consensus 159 dLl~im~--~~TG~~~~~~PlT~ 179 (276)
T PF06675_consen 159 DLLDIME--RVTGKLPVTFPLTT 179 (276)
T ss_pred HHHHHHH--hhcCCCceEEeccc
Confidence 5444333 23466655554443
No 122
>cd00084 HMG-box High Mobility Group (HMG)-box is found in a variety of eukaryotic chromosomal proteins and transcription factors. HMGs bind to the minor groove of DNA and have been classified by DNA binding preferences. Two phylogenically distinct groups of Class I proteins bind DNA in a sequence specific fashion and contain a single HMG box. One group (SOX-TCF) includes transcription factors, TCF-1, -3, -4; and also SRY and LEF-1, which bind four-way DNA junctions and duplex DNA targets. The second group (MATA) includes fungal mating type gene products MC, MATA1 and Ste11. Class II and III proteins (HMGB-UBF) bind DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III member
Probab=30.89 E-value=1.3e+02 Score=20.32 Aligned_cols=42 Identities=17% Similarity=0.200 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 21 KKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
.+.++...+..||+.+ ..+..+.+.+.|..|++.++...+|.
T Consensus 12 ~~~~~~~~~~~~~~~~------~~~i~~~~~~~W~~l~~~~k~~y~~~ 53 (66)
T cd00084 12 SQEHRAEVKAENPGLS------VGEISKILGEMWKSLSEEEKKKYEEK 53 (66)
T ss_pred HHHHHHHHHHHCcCCC------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 3456667777888854 34677889999999998776655554
No 123
>PF01846 FF: FF domain; InterPro: IPR002713 The FF domain may be involved in protein-protein interaction []. It often occurs as multiple copies and often accompanies WW domains IPR001202 from INTERPRO. PRP40 from yeast encodes a novel, essential splicing component that associates with the yeast U1 small nuclear ribonucleoprotein particle [].; PDB: 3HFH_B 2KIS_A 2DOD_A 2JUC_A 2LKS_A 1UZC_A 2KZG_A 2L9V_A 2DOF_A 2KFD_A ....
Probab=30.71 E-value=54 Score=21.65 Aligned_cols=48 Identities=13% Similarity=0.506 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHhhc--CChhhhhhhhcc
Q 019662 19 DLKKSYRKLAMKWHPDKNPNDK-KEAEARFKQISEAYEVL--SDPQKRAIYDQY 69 (337)
Q Consensus 19 ~Ik~ayr~la~~~hPd~~~~~~-~~~~~~f~~i~~Ay~~L--~d~~~r~~yD~~ 69 (337)
+.+.+|++|...+. .++... ..+...+ .=...|..| ++..++.+|+.|
T Consensus 1 ~a~~~F~~lL~e~~--i~~~s~W~~~~~~l-~~dpry~~i~~~~~~R~~lF~ey 51 (51)
T PF01846_consen 1 KAREAFKELLKEHK--ITPYSSWEEVKPKL-SKDPRYKAIGDSESERESLFEEY 51 (51)
T ss_dssp HHHHHHHHHHHHTT--S-TTSSHHHHHHHH-TTSCHHHHSTSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCC--CCCCCcHHHHHHHH-ccCHHHHHhcCCHHHHHHHHHhC
Confidence 46889999988766 555432 1222222 112356656 445566666543
No 124
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=30.06 E-value=64 Score=26.01 Aligned_cols=40 Identities=15% Similarity=0.189 Sum_probs=26.7
Q ss_pred EEEeCCCCcCCCEEEECCCCCCCCC-------CCCccEEEEEEeeCC
Q 019662 202 TIDVKPGWKKGTKITFPDKGNEQPN-------QLPADLVFVIDEKPH 241 (337)
Q Consensus 202 ~V~Ip~G~~~G~~i~l~g~G~~~~~-------~~~GDL~v~i~v~~~ 241 (337)
+..||.|+..|+.|++.|.=...++ ...+|+.+++++..+
T Consensus 2 ~~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~ 48 (128)
T smart00276 2 TLPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFN 48 (128)
T ss_pred cccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCC
Confidence 4578999999999999986544321 112466666665544
No 125
>PF09285 Elong-fact-P_C: Elongation factor P, C-terminal; InterPro: IPR015365 These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology []. ; GO: 0043043 peptide biosynthetic process, 0005737 cytoplasm; PDB: 1YBY_A 3OYY_B 1UEB_B 3HUW_V 3HUY_V 3A5Z_H.
Probab=29.49 E-value=77 Score=22.02 Aligned_cols=20 Identities=25% Similarity=0.260 Sum_probs=14.0
Q ss_pred EEEEeCCCCcCCCEEEECCC
Q 019662 201 LTIDVKPGWKKGTKITFPDK 220 (337)
Q Consensus 201 ~~V~Ip~G~~~G~~i~l~g~ 220 (337)
+.|.||+-++.|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~VdT~ 49 (56)
T PF09285_consen 30 AEIQVPLFIEEGDKIKVDTR 49 (56)
T ss_dssp -EEEEETT--TT-EEEEETT
T ss_pred CEEEccceecCCCEEEEECC
Confidence 57999999999999998653
No 126
>PRK14051 negative regulator GrlR; Provisional
Probab=29.15 E-value=2.7e+02 Score=22.11 Aligned_cols=71 Identities=11% Similarity=0.041 Sum_probs=41.4
Q ss_pred CccEEEEEEeeCCCccccCCCceEEEEeeC--HHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCC
Q 019662 229 PADLVFVIDEKPHDVYKRDSNDLIVNHKVS--LAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPI 301 (337)
Q Consensus 229 ~GDL~v~i~v~~~~~f~r~g~dL~~~~~Is--l~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~ 301 (337)
.-||+++++-..|+..+.-+-+--+.+.|+ +.+.-.|+++.-.--+...+.|.+.. +-=..+.|++-|||.
T Consensus 47 d~~iilhvhR~n~ei~SVf~~eqdy~L~i~kk~~sn~~~~~l~~HV~~Nekl~vdv~a--kFI~~LvI~~~~~~~ 119 (123)
T PRK14051 47 DEDIILHVHRYNYEIPSVLNIEQDYQLVIPKKVLSNDNNLTLHCHVRGNEKLFVDVYA--KFIEPLVIKNTGMPQ 119 (123)
T ss_pred cceeEEEEEecccccccccCccccEEEecchhheeCCCCeEEEEEEcCCcEEEEEEee--eeeeeeEEccCCCcc
Confidence 357888887776665554444444556666 44444444444444455556665532 222358899999984
No 127
>smart00841 Elong-fact-P_C Elongation factor P, C-terminal. These nucleic acid binding domains are predominantly found in elongation factor P, where they adopt an OB-fold, with five beta-strands forming a beta-barrel in a Greek-key topology PUBMED:15210970.
Probab=28.33 E-value=78 Score=22.01 Aligned_cols=20 Identities=20% Similarity=0.240 Sum_probs=17.4
Q ss_pred EEEEeCCCCcCCCEEEECCC
Q 019662 201 LTIDVKPGWKKGTKITFPDK 220 (337)
Q Consensus 201 ~~V~Ip~G~~~G~~i~l~g~ 220 (337)
++|.||.-++.|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~V~T~ 49 (56)
T smart00841 30 AVVQVPLFINEGDKIKVDTR 49 (56)
T ss_pred CEEEcCCcccCCCEEEEECC
Confidence 57999999999999998653
No 128
>COG5435 Uncharacterized conserved protein [Function unknown]
Probab=28.28 E-value=90 Score=26.20 Aligned_cols=31 Identities=26% Similarity=0.546 Sum_probs=28.5
Q ss_pred CCCcEEEEEEEECCCCCCHHHHHHHHHHhCC
Q 019662 307 NRGDLRIKFEVKFPTKLTPEQRAGLKRALGG 337 (337)
Q Consensus 307 ~~GdL~v~~~v~~P~~l~~~~~~~l~~~l~~ 337 (337)
.+|+-.+.|....|..+++.|+.++.+++.|
T Consensus 108 ~~g~~vLifT~Tt~~~ftp~q~~~~~~~I~S 138 (147)
T COG5435 108 ERGDTVLIFTLTTPGEFTPSQKKAWEQVIQS 138 (147)
T ss_pred ccCCeEEEEEecCCCCCCHHHHHHHHHHHHh
Confidence 5899999999999999999999999998764
No 129
>KOG0715 consensus Molecular chaperone (DnaJ superfamily) [Posttranslational modification, protein turnover, chaperones]
Probab=27.54 E-value=67 Score=30.13 Aligned_cols=141 Identities=15% Similarity=0.107 Sum_probs=77.2
Q ss_pred CCCCeeeeeeechhhheeCceEEEEEEEEEEc--CCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662 158 KPPPVESKLPCSLEELYSGSTRKMKISRTVVD--ANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 235 (337)
Q Consensus 158 ~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~--g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~ 235 (337)
.+.+.++.+.++|++|..|+.+.+.+.....+ +.| ...++|+....--+-.|.|-.. .-...++++.
T Consensus 136 ~~~~~~~d~~~~f~~A~~g~~~~~~~~~~~~~~t~~~----------~~~~~~~~~~~~~~~~~~~~~~-~~~~~~f~~~ 204 (288)
T KOG0715|consen 136 PDKDQYYDLSLDFKEAVRGSKKRISFNVLSDCETCFG----------SGAEEGAKRESCKTCSGRGLVS-NPKEDPFILY 204 (288)
T ss_pred cCcccccccccCHHHHhhccccceEEEeecccccccC----------cCcccccccccchhhhCccccc-ccccCCccee
Confidence 34577778999999999999777776543321 111 1144444443333333333110 0012222222
Q ss_pred EEeeCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEE
Q 019662 236 IDEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKF 315 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~ 315 (337)
+...-+....+..+-.++-.|-. .|.. -..+.|.+|+++.++.++++.+.|-- ||+|.+
T Consensus 205 ---------~~~~c~~~~~~~~~~c~~~~g~~-~v~~--~k~i~i~~~~g~~~~~~l~~~~~~~~---------~l~v~~ 263 (288)
T KOG0715|consen 205 ---------TCSYCLGRGLVLRDNCQACSGAG-QVRR--AKDIMIVLPAGVRSADTLRFAGHGND---------DLFVRL 263 (288)
T ss_pred ---------ecccccccceeccchHHHhhcch-hhhh--heeEEeecCcccccccEEEEecCCcc---------eEEEEE
Confidence 01111112222222234444433 3322 23578889999999999999988642 999999
Q ss_pred EEECCCCCCHHHHHH
Q 019662 316 EVKFPTKLTPEQRAG 330 (337)
Q Consensus 316 ~v~~P~~l~~~~~~~ 330 (337)
.|.--..+..+..++
T Consensus 264 ~v~~~~~~~r~~~~i 278 (288)
T KOG0715|consen 264 IVAKSPSFRREGKDI 278 (288)
T ss_pred EeccCcccccccCcc
Confidence 998766666443333
No 130
>cd01388 SOX-TCF_HMG-box SOX-TCF_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include SRY and its homologs in insects and vertebrates, and transcription factor-like proteins, TCF-1, -3, -4, and LEF-1. They appear to bind the minor groove of the A/T C A A A G/C-motif.
Probab=27.25 E-value=1.1e+02 Score=21.89 Aligned_cols=41 Identities=24% Similarity=0.384 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 22 KSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+..|...++-||+.. ..+..+.|.+.+..|++.++...+|.
T Consensus 14 ~~~r~~~~~~~p~~~------~~eisk~l~~~Wk~ls~~eK~~y~~~ 54 (72)
T cd01388 14 KRHRRKVLQEYPLKE------NRAISKILGDRWKALSNEEKQPYYEE 54 (72)
T ss_pred HHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 345666667788754 24678889999999998888766654
No 131
>cd05794 S1_EF-P_repeat_2 S1_EF-P_repeat_2: Translation elongation factor P (EF-P), S1-like RNA-binding domain, repeat 1. EF-P stimulates the peptidyltransferase activity in the prokaryotic 70S ribosome. EF-P enhances the synthesis of certain dipeptides with N-formylmethionyl-tRNA and puromycine in vitro. EF-P binds to both the 30S and 50S ribosomal subunits. EF-P binds near the streptomycine binding site of the 16S rRNA in the 30S subunit. EF-P interacts with domains 2 and 5 of the 23S rRNA. The L16 ribosomal protein of the 50S or its N-terminal fragment are required for EF-P mediated peptide bond synthesis, whereas L11, L15, and L7/L12 are not required in this reaction, suggesting that EF-P may function at a different ribosomal site than most other translation factors. EF-P is essential for cell viability and is required for protein synthesis. EF-P is mainly present in bacteria. The EF-P homologs in archaea and eukaryotes are the initiation factors aIF5A and eIF5A, respectively. EF-P
Probab=25.21 E-value=94 Score=21.60 Aligned_cols=20 Identities=25% Similarity=0.277 Sum_probs=17.6
Q ss_pred EEEEeCCCCcCCCEEEECCC
Q 019662 201 LTIDVKPGWKKGTKITFPDK 220 (337)
Q Consensus 201 ~~V~Ip~G~~~G~~i~l~g~ 220 (337)
+.|.||.-+..|++|++.-.
T Consensus 30 ~~i~VP~FI~~Gd~I~V~T~ 49 (56)
T cd05794 30 AEVQVPLFIKEGEKIKVDTR 49 (56)
T ss_pred CEEEcCCeecCCCEEEEECC
Confidence 57999999999999998754
No 132
>cd02639 R3H_RRM R3H domain of mainly fungal proteins which are associated with a RNA recognition motif (RRM) domain. Present in this group is the RNA-binding post-transcriptional regulator Cip2 (Csx1-interacting protein 2) involved in counteracting Csx1 function. Csx1 plays a central role in controlling gene expression during oxidative stress. The name of the R3H domain comes from the characteristic spacing of the most conserved arginine and histidine residues. The function of the domain is predicted to bind ssDNA or ssRNA in a sequence-specific manner.
Probab=24.97 E-value=93 Score=21.88 Aligned_cols=21 Identities=29% Similarity=0.521 Sum_probs=17.6
Q ss_pred EEEEECCCCCCHHHHHHHHHH
Q 019662 314 KFEVKFPTKLTPEQRAGLKRA 334 (337)
Q Consensus 314 ~~~v~~P~~l~~~~~~~l~~~ 334 (337)
...+.||.+||+++|..+-.+
T Consensus 17 ~~eL~Fp~~ls~~eRriih~l 37 (60)
T cd02639 17 RDELAFPSSLSPAERRIVHLL 37 (60)
T ss_pred ceEEEcCCCCCHHHHHHHHHH
Confidence 567889999999999887654
No 133
>PF12791 RsgI_N: Anti-sigma factor N-terminus; InterPro: IPR024449 The heat shock genes in Bacillus subtilis can be classified into several groups according to their regulation [], and the sigma gene, sigI, of Bacillus subtilis belongs to the group IV heat-shock response genes and has many orthologues in the bacterial phylum Firmicutes []. Regulation of sigma factor I is carried out by RsgI from the same operon. This entry represents the N-terminal cytoplasmic portion of RsgI ('upstream' of the single transmembrane helix) which has been shown to interact directly with Sigma-I [].
Probab=24.79 E-value=1.9e+02 Score=19.43 Aligned_cols=36 Identities=17% Similarity=0.189 Sum_probs=28.5
Q ss_pred CCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCc
Q 019662 264 GGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGM 299 (337)
Q Consensus 264 ~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~ 299 (337)
.+-...|-|.||.-++|+.++...-|+++.+.-.-.
T Consensus 4 ~~~~aiVlT~dGeF~~ik~~~~~~vG~eI~~~~~~~ 39 (56)
T PF12791_consen 4 KKKYAIVLTPDGEFIKIKRKPGMEVGQEIEFDEKDI 39 (56)
T ss_pred cCCEEEEEcCCCcEEEEeCCCCCcccCEEEEechhh
Confidence 355678899999888999887788899888766544
No 134
>cd01390 HMGB-UBF_HMG-box HMGB-UBF_HMG-box, class II and III members of the HMG-box superfamily of DNA-binding proteins. These proteins bind the minor groove of DNA in a non-sequence specific fashion and contain two or more tandem HMG boxes. Class II members include non-histone chromosomal proteins, HMG1 and HMG2, which bind to bent or distorted DNA such as four-way DNA junctions, synthetic DNA cruciforms, kinked cisplatin-modified DNA, DNA bulges, cross-overs in supercoiled DNA, and can cause looping of linear DNA. Class III members include nucleolar and mitochondrial transcription factors, UBF and mtTF1, which bind four-way DNA junctions.
Probab=24.73 E-value=1.8e+02 Score=19.78 Aligned_cols=40 Identities=23% Similarity=0.266 Sum_probs=28.4
Q ss_pred HHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcc
Q 019662 24 YRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQY 69 (337)
Q Consensus 24 yr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 69 (337)
.|...+.-||+.. ..+..+.|.+.+..|++.++....+.+
T Consensus 15 ~r~~~~~~~p~~~------~~~i~~~~~~~W~~ls~~eK~~y~~~a 54 (66)
T cd01390 15 QRPKLKKENPDAS------VTEVTKILGEKWKELSEEEKKKYEEKA 54 (66)
T ss_pred HHHHHHHHCcCCC------HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 4555566788743 357888999999999987776655543
No 135
>cd01389 MATA_HMG-box MATA_HMG-box, class I member of the HMG-box superfamily of DNA-binding proteins. These proteins contain a single HMG box, and bind the minor groove of DNA in a highly sequence-specific manner. Members include the fungal mating type gene products MC, MATA1 and Ste11.
Probab=24.45 E-value=1.3e+02 Score=21.77 Aligned_cols=42 Identities=10% Similarity=0.010 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 21 KKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
.+.+|..++.-||+.. ..+..+.|.+.+..|++.++...++.
T Consensus 13 ~~~~r~~~~~~~p~~~------~~eisk~~g~~Wk~ls~eeK~~y~~~ 54 (77)
T cd01389 13 RQDKHAQLKTENPGLT------NNEISRIIGRMWRSESPEVKAYYKEL 54 (77)
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhhCCHHHHHHHHHH
Confidence 4566777888899864 24677889999999998777655554
No 136
>COG2879 Uncharacterized small protein [Function unknown]
Probab=24.20 E-value=1.4e+02 Score=21.31 Aligned_cols=16 Identities=44% Similarity=0.592 Sum_probs=11.6
Q ss_pred HHHHHHHhCCCCCCCC
Q 019662 24 YRKLAMKWHPDKNPND 39 (337)
Q Consensus 24 yr~la~~~hPd~~~~~ 39 (337)
|-+-.++.|||+.+-.
T Consensus 28 YVehmr~~hPd~p~mT 43 (65)
T COG2879 28 YVEHMRKKHPDKPPMT 43 (65)
T ss_pred HHHHHHHhCcCCCccc
Confidence 3444678999999864
No 137
>cd05792 S1_eIF1AD_like S1_eIF1AD_like: eukaryotic translation initiation factor 1A domain containing protein (eIF1AD)-like, S1-like RNA-binding domain. eIF1AD is also known as MGC11102 protein. Little is known about the function of eIF1AD. S1-like RNA-binding domains are found in a wide variety of RNA-associated proteins, including translation initiation factor IF1A (also referred to as eIF1A in eukaryotes). eIF1A is essential for translation initiation. eIF1A acts synergistically with eIF1 to mediate assembly of ribosomal initiation complexes at the initiation codon and maintain the accuracy of this process by recognizing and destabilizing aberrant preinitiation complexes from the mRNA. Without eIF1A and eIF1, 43S ribosomal preinitiation complexes can bind to the cap-proximal region, but are unable to reach the initiation codon. eIF1a also enhances the formation of 5'-terminal complexes in the presence of other translation initiation factors.
Probab=22.91 E-value=2.7e+02 Score=20.73 Aligned_cols=22 Identities=14% Similarity=0.161 Sum_probs=17.2
Q ss_pred hCCc-EEEEecCCCcEEEEEcCC
Q 019662 263 LGGT-SVSLITLDGRDLNIAVTD 284 (337)
Q Consensus 263 l~G~-~~~i~~l~g~~~~v~i~~ 284 (337)
++|. -++|.+.||.+..+.+|.
T Consensus 9 ~~G~n~~~V~~~dG~~~l~~iP~ 31 (78)
T cd05792 9 SKGNNLHEVETPNGSRYLVSMPT 31 (78)
T ss_pred cCCCcEEEEEcCCCCEEEEEech
Confidence 4554 578999999988888886
No 138
>smart00441 FF Contains two conserved F residues. A novel motif that often accompanies WW domains. Often contains two conserved Phe (F) residues.
Probab=22.72 E-value=2.4e+02 Score=18.65 Aligned_cols=49 Identities=18% Similarity=0.450 Sum_probs=26.2
Q ss_pred HHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHH-hhcCChhhhhhhhcc
Q 019662 19 DLKKSYRKLAMKWHPDKNPNDK-KEAEARFKQISEAY-EVLSDPQKRAIYDQY 69 (337)
Q Consensus 19 ~Ik~ayr~la~~~hPd~~~~~~-~~~~~~f~~i~~Ay-~~L~d~~~r~~yD~~ 69 (337)
+.+.+|++|...+.-+. +... ..+..++. -...| .++++..++.+|..|
T Consensus 2 ~~~~~F~~LL~e~~~~~-~~~~W~~~~~~~~-~d~ry~~l~~~~~r~~lF~~~ 52 (55)
T smart00441 2 EAKEAFKELLKEHEVIT-PDTTWSEARKKLK-NDPRYKALLSESEREQLFEDH 52 (55)
T ss_pred hHHHHHHHHHHhCCCCC-CCCcHHHHHHHHh-cChHHHHhcChHHHHHHHHHH
Confidence 57889999977764332 2221 12333332 23456 445555566666654
No 139
>smart00276 GLECT Galectin. Galectin - galactose-binding lectin
Probab=22.25 E-value=1.3e+02 Score=24.09 Aligned_cols=42 Identities=21% Similarity=0.440 Sum_probs=29.7
Q ss_pred EEcCCCCCCCcEEEEcCCCcCCCCC-----CCCCCcEEEEEEEECCC
Q 019662 280 IAVTDIISPGFELGIPGEGMPIARE-----PGNRGDLRIKFEVKFPT 321 (337)
Q Consensus 280 v~i~~~~~~g~~~rl~g~G~p~~~~-----~~~~GdL~v~~~v~~P~ 321 (337)
..+|.+..+|+.+.|.|.=.+.... ....+|+.++|++.|++
T Consensus 3 ~~lp~~l~~G~~i~i~G~~~~~~~~F~inl~~~~~di~lH~n~rf~~ 49 (128)
T smart00276 3 LPIPGGLKPGQTLTVRGIVLPDAKRFSINLLTGGDDIALHFNPRFNE 49 (128)
T ss_pred ccCCCCCCCCCEEEEEEEECCCCCEEEEEeecCCCCEEEEEeccCCC
Confidence 4567788899999998875543221 01237999999999986
Done!