Query 019662
Match_columns 337
No_of_seqs 267 out of 2470
Neff 7.9
Searched_HMMs 29240
Date Mon Mar 25 05:12:30 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019662.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019662hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3lz8_A Putative chaperone DNAJ 100.0 5.4E-68 1.8E-72 500.9 22.3 286 3-336 28-315 (329)
2 2q2g_A HSP40 protein, heat sho 100.0 7.7E-47 2.6E-51 328.3 23.4 178 158-336 2-180 (180)
3 3agx_A DNAJ homolog subfamily 100.0 1E-46 3.6E-51 327.7 24.0 178 159-337 2-181 (181)
4 1c3g_A Heat shock protein 40; 100.0 3.3E-44 1.1E-48 309.0 17.8 169 160-332 1-170 (170)
5 1nlt_A Protein YDJ1, mitochond 100.0 5.6E-43 1.9E-47 318.6 20.3 176 156-332 8-248 (248)
6 3i38_A Putative chaperone DNAJ 99.9 1.8E-26 6.3E-31 183.6 11.6 94 239-336 2-95 (109)
7 1xao_A YDJ1, mitochondrial pro 99.9 2E-25 6.7E-30 181.1 12.0 93 243-336 1-97 (121)
8 1bq0_A DNAJ, HSP40; chaperone, 99.9 7E-25 2.4E-29 173.1 5.6 75 1-76 1-75 (103)
9 1hdj_A Human HSP40, HDJ-1; mol 99.9 3.5E-24 1.2E-28 160.2 7.5 74 1-76 1-74 (77)
10 2ej7_A HCG3 gene; HCG3 protein 99.9 3.1E-23 1.1E-27 156.8 7.4 74 2-75 8-81 (82)
11 2lgw_A DNAJ homolog subfamily 99.9 3.2E-23 1.1E-27 162.2 6.2 75 2-76 1-75 (99)
12 2dmx_A DNAJ homolog subfamily 99.9 9E-23 3.1E-27 157.7 7.6 75 2-76 8-82 (92)
13 2ctr_A DNAJ homolog subfamily 99.9 1.1E-22 3.6E-27 156.0 7.5 74 2-77 6-79 (88)
14 2dn9_A DNAJ homolog subfamily 99.9 9.5E-23 3.3E-27 153.1 7.0 72 2-74 6-77 (79)
15 2o37_A Protein SIS1; HSP40, J- 99.9 1.5E-22 5E-27 156.5 6.1 72 2-77 7-78 (92)
16 2ctp_A DNAJ homolog subfamily 99.9 3.1E-22 1.1E-26 149.9 7.1 71 2-74 6-76 (78)
17 2cug_A Mkiaa0962 protein; DNAJ 99.9 2.8E-22 9.5E-27 153.7 6.5 71 1-73 15-85 (88)
18 2och_A Hypothetical protein DN 99.9 8.5E-22 2.9E-26 145.6 7.2 67 2-72 7-73 (73)
19 2ctw_A DNAJ homolog subfamily 99.8 8E-22 2.8E-26 157.0 6.6 73 2-75 16-88 (109)
20 2ctq_A DNAJ homolog subfamily 99.8 5.2E-22 1.8E-26 158.9 5.3 73 2-75 19-91 (112)
21 2yua_A Williams-beuren syndrom 99.8 1.8E-21 6.2E-26 152.4 6.6 67 2-69 16-82 (99)
22 1wjz_A 1700030A21RIK protein; 99.8 9E-21 3.1E-25 147.0 5.3 70 2-71 15-89 (94)
23 3apq_A DNAJ homolog subfamily 99.8 4.1E-20 1.4E-24 163.4 8.0 73 3-76 2-74 (210)
24 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 2.7E-20 9.4E-25 148.2 4.3 70 2-71 14-86 (109)
25 2l6l_A DNAJ homolog subfamily 99.8 3.6E-19 1.2E-23 150.5 6.1 70 2-71 9-83 (155)
26 2ys8_A RAB-related GTP-binding 99.8 2.4E-19 8.4E-24 137.7 4.3 62 2-65 26-87 (90)
27 1faf_A Large T antigen; J doma 99.7 7E-19 2.4E-23 131.7 4.3 65 3-73 11-77 (79)
28 1iur_A KIAA0730 protein; DNAJ 99.7 3.8E-19 1.3E-23 135.7 2.4 61 3-63 16-76 (88)
29 1gh6_A Large T antigen; tumor 99.7 1.4E-19 5E-24 144.6 -0.4 65 3-72 8-74 (114)
30 2pf4_E Small T antigen; PP2A, 99.7 3.6E-19 1.2E-23 151.9 0.7 64 3-71 11-76 (174)
31 1fpo_A HSC20, chaperone protei 99.7 4.6E-18 1.6E-22 145.7 4.6 68 3-70 1-74 (171)
32 3hho_A CO-chaperone protein HS 99.7 9E-18 3.1E-22 144.4 5.7 68 2-69 3-76 (174)
33 3bvo_A CO-chaperone protein HS 99.7 1.9E-17 6.5E-22 146.0 6.0 67 2-68 42-114 (207)
34 1n4c_A Auxilin; four helix bun 99.7 7.5E-18 2.6E-22 144.6 3.2 64 3-66 117-182 (182)
35 2qwo_B Putative tyrosine-prote 99.7 7.1E-18 2.4E-22 129.1 2.4 57 3-59 33-91 (92)
36 3ag7_A Putative uncharacterize 99.7 2E-17 6.8E-22 130.5 2.5 59 2-61 40-104 (106)
37 3uo3_A J-type CO-chaperone JAC 99.6 5.6E-17 1.9E-21 140.0 3.0 65 2-70 10-81 (181)
38 3apo_A DNAJ homolog subfamily 99.6 2.5E-17 8.4E-22 172.1 0.7 76 1-77 19-94 (780)
39 2guz_A Mitochondrial import in 99.6 1.1E-16 3.7E-21 117.3 2.7 56 3-63 14-70 (71)
40 3i38_A Putative chaperone DNAJ 99.4 1.1E-13 3.7E-18 109.7 3.9 82 157-252 9-90 (109)
41 1xao_A YDJ1, mitochondrial pro 99.3 6.1E-13 2.1E-17 107.5 4.9 83 157-251 4-91 (121)
42 3agx_A DNAJ homolog subfamily 99.1 3.9E-11 1.3E-15 103.6 4.9 83 156-250 89-173 (181)
43 1c3g_A Heat shock protein 40; 99.1 3.6E-11 1.2E-15 102.8 4.5 83 156-250 83-167 (170)
44 2q2g_A HSP40 protein, heat sho 99.1 5.7E-11 1.9E-15 102.5 4.9 83 156-250 89-173 (180)
45 2y4t_A DNAJ homolog subfamily 99.1 6.9E-11 2.3E-15 113.0 5.3 66 3-68 382-449 (450)
46 1nlt_A Protein YDJ1, mitochond 99.1 1.1E-10 3.6E-15 105.8 5.6 85 156-252 158-247 (248)
47 3lz8_A Putative chaperone DNAJ 99.0 2.1E-10 7.1E-15 107.9 3.9 83 156-252 228-310 (329)
48 2guz_B Mitochondrial import in 98.8 3.4E-09 1.2E-13 75.5 4.4 51 5-60 6-59 (65)
49 2ctt_A DNAJ homolog subfamily 89.6 0.025 8.5E-07 43.5 -2.4 30 159-188 1-30 (104)
50 2cqn_A Formin-binding protein 60.5 12 0.00042 26.7 4.5 55 15-70 6-62 (77)
51 2b7e_A PRE-mRNA processing pro 47.5 30 0.001 23.4 4.4 49 18-70 3-56 (59)
52 2pi2_E Replication protein A 1 36.9 1.6E+02 0.0054 23.4 9.2 64 264-334 58-126 (142)
53 1uzc_A Hypothetical protein FL 36.3 71 0.0024 22.2 5.2 53 14-70 11-66 (71)
54 4a3n_A Transcription factor SO 28.3 90 0.0031 20.8 4.7 42 21-68 14-55 (71)
55 1ny9_A Transcriptional activat 26.8 1.1E+02 0.0038 23.9 5.6 25 45-71 100-124 (143)
56 1hry_A Human SRY; DNA, DNA-bin 25.7 1.1E+02 0.0039 20.7 4.9 42 21-68 16-57 (76)
57 1i11_A Transcription factor SO 25.4 1.3E+02 0.0043 20.9 5.1 41 22-68 17-57 (81)
58 1wz6_A HMG-box transcription f 25.0 1.2E+02 0.004 21.1 4.9 42 21-68 19-60 (82)
59 2crj_A SWI/SNF-related matrix- 24.3 1.5E+02 0.0051 21.1 5.5 41 22-68 20-60 (92)
60 3zxf_A Galectin-7; sugar bindi 23.6 1.3E+02 0.0045 23.4 5.4 44 279-322 9-60 (138)
61 1qqr_A Streptokinase domain B; 23.3 41 0.0014 26.6 2.2 30 6-35 35-64 (138)
62 2r0h_A CGL3 lectin; galectin-r 23.0 1.8E+02 0.0061 23.7 6.1 21 201-221 9-29 (164)
63 3f27_D Transcription factor SO 22.4 1.5E+02 0.005 20.5 5.0 42 21-68 18-59 (83)
64 3zxf_A Galectin-7; sugar bindi 22.1 1.1E+02 0.0039 23.8 4.7 42 200-241 7-58 (138)
65 2cs1_A PMS1 protein homolog 1; 20.9 1.3E+02 0.0045 21.4 4.6 41 22-68 20-60 (92)
66 2xzz_A Protein-glutamine gamma 20.8 2.6E+02 0.0088 20.6 6.8 65 247-316 18-86 (102)
67 1hme_A High mobility group pro 20.5 2E+02 0.0067 19.5 5.3 41 22-68 19-59 (77)
68 1wgf_A Upstream binding factor 20.4 1.3E+02 0.0044 21.4 4.4 42 22-69 33-74 (90)
No 1
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=100.00 E-value=5.4e-68 Score=500.87 Aligned_cols=286 Identities=27% Similarity=0.399 Sum_probs=163.7
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCCCCCCC
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDMPPSSS 82 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~~~~~~ 82 (337)
+|||++|||+++|+.+|||+|||+||++||||+|+++ .|+++|++|++||++|+||.+|+.||+|+......++ +
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~~~~---~ 102 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKEN--DAEAKFKDLAEAWEVLKDEQRRAEYDQLWQHRNDPGF---G 102 (329)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCCh--HHHHHHHHHHHHHHHhhhhhhhcccchhhccccCCCc---c
Confidence 7999999999999999999999999999999999863 6889999999999999999999999999654221111 0
Q ss_pred CCCCCCCCCCCCCCCCCCCchhHHHHhhhCCCCCCCCCCCCCCccccccCCCCCcCCCCCCcCcccccCCCCCCCCCCCe
Q 019662 83 SGYSYANGSGGNSKGFNPRNAEDIFAEFFGSSPFGFGSAGPGKSTRFQSEGGGTFGGFGMGENIFRTYSDGSVPRKPPPV 162 (337)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~d~f~~~fg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~ 162 (337)
++++..+ + .|.+.++.|+|++|||+...+ + + ...++++.|+
T Consensus 103 ~~~~~~~-~-----~f~~~~f~diF~~~Fg~~g~~-------------------------~-~-------~~~~~~g~Dl 143 (329)
T 3lz8_A 103 RQRQTHE-Q-----SYSQQDFDDIFSSMFGQQAHQ-------------------------R-R-------RQHAARGHDL 143 (329)
T ss_dssp -------------------------------------------------------------------------CCCCCCE
T ss_pred ccccccc-C-----CcCCCchhhhhHhhhcCcCCC-------------------------C-C-------CCCcCCCCCE
Confidence 0010000 0 122235778999998741000 0 0 1124678999
Q ss_pred eeeeeechhhheeCceEEEEEEEEEEcCCCeeeec-ceEEEEEeCCCCcCCCEEEECCCCCCCC-CCCCccEEEEEEeeC
Q 019662 163 ESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPE-SEILTIDVKPGWKKGTKITFPDKGNEQP-NQLPADLVFVIDEKP 240 (337)
Q Consensus 163 ~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~-~~~~~V~Ip~G~~~G~~i~l~g~G~~~~-~~~~GDL~v~i~v~~ 240 (337)
.+++.|||+|+|.|+++.|.+.+.+|++.|+++.+ .++++|+||||+++|++|+|+|+|++.+ ++.+|||||+|+|++
T Consensus 144 ~~~l~vsleea~~G~~k~i~i~~~v~~g~G~v~~~~~~~l~V~IP~Gv~~G~~Irl~G~G~~g~~gg~~GDL~v~I~v~~ 223 (329)
T 3lz8_A 144 EIEVAVFLEETLAEQTRTISYNLPVYNVFGMIESETPKTLNVKIPAGVVDGQRIRLKGQGTPGENGGPNGDLWLVIHIAP 223 (329)
T ss_dssp EEEECCCTTGGGSCEEEEEEEEEEECCSCC-CCEEEEEEEEEEECTTCCTTCEEEESSCSCCC---CCCCCEEEEECCCC
T ss_pred EEEEecchhhhhhccceEEEEEEEeecCCeEEEEecceEEEEeCCCCCCCCCEEEEcccccCCCCCCCCCcEEEEEEEec
Confidence 99999999999999999999999999988865443 6789999999999999999999999974 567999999999999
Q ss_pred CCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 019662 241 HDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP 320 (337)
Q Consensus 241 ~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P 320 (337)
|+.|+|+|+||+++++|||+||++|++++|+||||+ +.|+||+++++|+++||+|+|||.. +.+|||||+|+|.||
T Consensus 224 h~~F~R~G~DL~~~~~Isl~eAllG~~v~VptLdG~-v~l~ip~gt~~g~~~rl~G~GmP~~---~~rGDL~v~~~V~~P 299 (329)
T 3lz8_A 224 HPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVSK---THTGDLFAVIKIVMP 299 (329)
T ss_dssp CSSCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBCS---SCBCCEEEEEEECCC
T ss_pred CCccEEcCCcEEEEEECCHHHHcCCCeEEEECCCCC-EEEEECCCCCCCCEEEEcCCCCCCC---CCCCCEEEEEEEECC
Confidence 999999999999999999999999999999999997 7999999999999999999999975 369999999999999
Q ss_pred CCCCHHHHHHHHHHhC
Q 019662 321 TKLTPEQRAGLKRALG 336 (337)
Q Consensus 321 ~~l~~~~~~~l~~~l~ 336 (337)
++||++|+++|+++..
T Consensus 300 ~~l~~~q~~~l~~~~~ 315 (329)
T 3lz8_A 300 TKPDEKARELWQQLAA 315 (329)
T ss_dssp SSCCHHHHHHHHHHHH
T ss_pred CCCCHHHHHHHHHHHh
Confidence 9999999999998753
No 2
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=100.00 E-value=7.7e-47 Score=328.34 Aligned_cols=178 Identities=39% Similarity=0.738 Sum_probs=167.0
Q ss_pred CCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCC-CCCCCCccEEEEE
Q 019662 158 KPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNE-QPNQLPADLVFVI 236 (337)
Q Consensus 158 ~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~-~~~~~~GDL~v~i 236 (337)
++.|+.+++.|||+|||+|+++++.+.+.+.|++| .+.+.++++|+||||+++|++|+|+|+|++ .+++.+|||||+|
T Consensus 2 ~g~d~~~~l~islee~~~G~~k~i~~~~~~~c~~g-~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~g~~gg~~GDl~v~i 80 (180)
T 2q2g_A 2 APRSHEVPLLVTLEELYLGKRKKIKVTRKRFIEHK-VRNEENIVEVEIKPGWKDGTKLTYSGEGDQESPGTSPGDLVLII 80 (180)
T ss_dssp --CEEEEEEEECHHHHHHCEEEEEEEEEEEEETTE-EEEEEEEEEEEECTTCCTTCEEEETTCSCCSSTTSCCCEEEEEE
T ss_pred CCCCEEEEEEeeHHHhcCCcEEEEEEeEEEecCCc-eEEeeEEEEEEECCCCcCCcEEEEeeccCCCCCCCccccEEEEE
Confidence 36799999999999999999999999998887776 678889999999999999999999999999 5888999999999
Q ss_pred EeeCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEE
Q 019662 237 DEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFE 316 (337)
Q Consensus 237 ~v~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~ 316 (337)
++++|+.|+|+|+||+++++|||+||++|+++.|+|+||+.+.|++|+++++|+++||+|+|||..++++.+|||||+|+
T Consensus 81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (180)
T 2q2g_A 81 QTKTHPRFTRDDCHLIMKVTIPLVRALTGFTCPVTTLDNRNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLILEFD 160 (180)
T ss_dssp EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTCCEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEEEEEE
T ss_pred EEEecccEEEcCCEEEEEEEcCHHHHhCCCEEEeeCCCCCEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999988999999999999999999999998764567899999999
Q ss_pred EECCCCCCHHHHHHHHHHhC
Q 019662 317 VKFPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 317 v~~P~~l~~~~~~~l~~~l~ 336 (337)
|.||++||++|+++|+++||
T Consensus 161 V~~P~~Ls~~q~~~l~~~~p 180 (180)
T 2q2g_A 161 ICFPKSLTPEQKKLIKEALD 180 (180)
T ss_dssp EECCSCCCHHHHHHHHHHC-
T ss_pred EECCCCCCHHHHHHHHHhcC
Confidence 99999999999999999986
No 3
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=100.00 E-value=1e-46 Score=327.68 Aligned_cols=178 Identities=48% Similarity=0.877 Sum_probs=163.6
Q ss_pred CCCeeeeeeechhhheeCceEEEEEEEEEE--cCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEE
Q 019662 159 PPPVESKLPCSLEELYSGSTRKMKISRTVV--DANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI 236 (337)
Q Consensus 159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~--~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i 236 (337)
++|+.+++.|||+|||+|+++++.+.+.+. +|.| ++.+.++++|+||||+.+|++|+|+|+|++.+++.+|||||+|
T Consensus 2 ~~d~~~~l~islee~~~G~~k~i~i~~~c~~c~G~g-~~~~~~~l~V~Ip~G~~~G~~ir~~G~G~~~~~g~~GDl~v~i 80 (181)
T 3agx_A 2 DPPVTHDLRVSLEEIYSGCTKKMKISHKRLNPDGKS-IRNEDKILTIEVKKGWKEGTKITFPKEGDQTSNNIPADIVFVL 80 (181)
T ss_dssp ----CEEEEECHHHHHHCEEEEEEEEEEEECTTSSC-EEEEEEEEEEEECTTCCTTCEEEETTCSCCCSSSCCCCEEEEE
T ss_pred CCCEEEEEEEEHHHhcCCcEEEEEEecccCCCCCce-EEEEeEEEEEEECCCccCCcEEEEeeccccCCCCCcccEEEEE
Confidence 368999999999999999999999986654 4455 6788899999999999999999999999999888999999999
Q ss_pred EeeCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEE
Q 019662 237 DEKPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFE 316 (337)
Q Consensus 237 ~v~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~ 316 (337)
++++|+.|+|+|+||+++++|||+||++|+++.|+|+||+.+.|++|+++++|+++||+|+|||..++++.+|||||+|+
T Consensus 81 ~~~~h~~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~V~~~ 160 (181)
T 3agx_A 81 KDKPHNIFKRDGSDVIYPARISLREALCGCTVNVPTLDGRTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLIIEFE 160 (181)
T ss_dssp EECCCSSCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEEEEEE
T ss_pred EEeccccceeeCCcEEEEEEcCHHHHhCCCEEEeECCCCCEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEEEEEE
Confidence 99999999999999999999999999999999999999988999999999999999999999998754567899999999
Q ss_pred EECCCCCCHHHHHHHHHHhCC
Q 019662 317 VKFPTKLTPEQRAGLKRALGG 337 (337)
Q Consensus 317 v~~P~~l~~~~~~~l~~~l~~ 337 (337)
|.||++||++|+++|+++||.
T Consensus 161 V~~P~~ls~~q~~~l~~~~~~ 181 (181)
T 3agx_A 161 VIFPERIPQTSRTVLEQVLPI 181 (181)
T ss_dssp EECCSCCCHHHHHHHHHHSCC
T ss_pred EECCCCCCHHHHHHHHHhccC
Confidence 999999999999999999974
No 4
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=100.00 E-value=3.3e-44 Score=309.01 Aligned_cols=169 Identities=37% Similarity=0.683 Sum_probs=156.9
Q ss_pred CCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCC-CCCCCCccEEEEEEe
Q 019662 160 PPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNE-QPNQLPADLVFVIDE 238 (337)
Q Consensus 160 ~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~-~~~~~~GDL~v~i~v 238 (337)
+|+.+++.|||+|||+|+++++.+.+.. ++|+. +.++++|+||||+.+|++|+|+|+|++ .+++.+|||||+|++
T Consensus 1 ~d~~~~l~islee~~~G~~k~i~~~~~~--~~G~~--~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~gg~~GDl~v~i~v 76 (170)
T 1c3g_A 1 ETVQVNLPVSLEDLFVGKKKSFKIGRKG--PHGAS--EKTQIDIQLKPGWKAGTKITYKNQGDYNPQTGRRKTLQFVIQE 76 (170)
T ss_dssp CEEEEEEEECHHHHHHTCEEEEEEEEEE--TTTEE--EEEEEEEECCTTCCTTCEEEESSCSSBCSSSSCBCEEEEEEEE
T ss_pred CCEEEEEEeEHHHhhCCcEEEEEEEEec--CCCcE--EeEEEEEEeCCCccCCCEEEEeccccCCCCCCccccEEEEEEE
Confidence 3788999999999999999999998873 46744 778999999999999999999999996 477889999999999
Q ss_pred eCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 019662 239 KPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK 318 (337)
Q Consensus 239 ~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~ 318 (337)
++|+.|+|+|+||+++++|||+||++|+++.|+|+||+.+.|++|+++++|+++||+|+|||..++++.+|||||+|+|.
T Consensus 77 ~~h~~F~R~G~DL~~~~~Isl~eAllG~~~~v~tldG~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~V~~~V~ 156 (170)
T 1c3g_A 77 KSHPNFKRDGDDLIYTLPLSFKESLLGFSKTIQTIDGRTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLIVKYKVD 156 (170)
T ss_dssp CCCSSEEEETTEEEEEECCBHHHHHHCEEEEEECSSSCEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEEEEECCB
T ss_pred ccCCccEEeCCcEeEEEEcCHHHHhCCCeEEeeCCCCCEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEEEEEEEE
Confidence 99999999999999999999999999999999999998899999999999999999999999876455789999999999
Q ss_pred CCCCCCHHHHHHHH
Q 019662 319 FPTKLTPEQRAGLK 332 (337)
Q Consensus 319 ~P~~l~~~~~~~l~ 332 (337)
||++||++|+++|+
T Consensus 157 ~P~~Ls~~q~~~l~ 170 (170)
T 1c3g_A 157 YPISLNDAQKRAID 170 (170)
T ss_dssp CCSSCCTTHHHHTC
T ss_pred CCCCCCHHHHHhhC
Confidence 99999999998863
No 5
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=100.00 E-value=5.6e-43 Score=318.60 Aligned_cols=176 Identities=33% Similarity=0.658 Sum_probs=150.4
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEE----cCC----------------Ce----------------------
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVV----DAN----------------GR---------------------- 193 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~----~g~----------------G~---------------------- 193 (337)
++++.|+.+.|.|||+|||+|++++|.+.+.+. +|+ |.
T Consensus 8 ~~~g~d~~~~l~vslee~~~G~~k~i~~~r~~~C~~C~G~G~~~g~~~~C~~C~G~G~~~~~~~~g~~~~~~~~~C~~C~ 87 (248)
T 1nlt_A 8 PQRGKDIKHEISASLEELYKGRTAKLALNKQILCKECEGRGGKKGAVKKCTSCNGQGIKFVTRQMGPMIQRFQTECDVCH 87 (248)
T ss_dssp CCBCCCEEEEEEECTTHHHHCEEEEEEEEEEEECTTTTTCSBSTTTCCCCTTSSSSSCEEEEEESSSEEEEEECSCTTCS
T ss_pred CCCCCCEEEEEEecHHHhcCCceEEEEeeEEEeCCCCcCccCCCCCCccCCCCCCCcEEEEEEecCceEEEEEEcCCCCC
Confidence 467899999999999999999999999987643 121 11
Q ss_pred -------------------eeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEEEeeCCCccccCCCceEEE
Q 019662 194 -------------------QTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVIDEKPHDVYKRDSNDLIVN 254 (337)
Q Consensus 194 -------------------~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i~v~~~~~f~r~g~dL~~~ 254 (337)
++.+.++++|+||||+.+|++|+|+|+|++.+++.+|||||+|++++|+.|+|+|+||+++
T Consensus 88 G~G~~i~~~~~C~~C~G~g~~~~~~~l~V~Ip~G~~~G~~ir~~g~G~~~~~g~~GDl~v~i~v~~h~~F~R~G~DL~~~ 167 (248)
T 1nlt_A 88 GTGDIIDPKDRCKSCNGKKVENERKILEVHVEPGMKDGQRIVFKGEADQAPDVIPGDVVFIVSERPHKSFKRDGDDLVYE 167 (248)
T ss_dssp SSSSCCCTTSBCSSSTTSCEEEEEEEEEEEECTTCCTTCEEEETTCSCCCTTCBCCCEEEEEEECCCSSCEEETTEEEEE
T ss_pred CcCEEeccCCCCcccCCCceEeeeEEEEEEECCCccCCCEEEEeeeecCCCCCCcceEEEEEEEecCccceeeCCEEEEE
Confidence 3456789999999999999999999999999888999999999999999999999999999
Q ss_pred EeeCHHHHhCCcEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC--CCHHHHHH
Q 019662 255 HKVSLAEALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK--LTPEQRAG 330 (337)
Q Consensus 255 ~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~--l~~~~~~~ 330 (337)
++|||+|||+|++++|+||||+.+.|+||++ +++|+++||+|+|||..+++ .+|||||+|+|.||++ ||++|+++
T Consensus 168 ~~Isl~eAllG~~i~v~tldG~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~-~~GDL~V~~~V~~P~~~~Ls~~q~~~ 246 (248)
T 1nlt_A 168 AEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKDPENHFTSEENLKK 246 (248)
T ss_dssp EEEEHHHHHHCBCCEEECSSSCEEECCBCTTTTCSTTCEEEETTCSCBCSSSC-SBCCEEEEEEEECCC-----------
T ss_pred EEeCHHHHhcCCEEEEeCCCCCEEEEEeCCCCeeCCCeEEEEcCCCCccCCCC-CcCCEEEEEEEECCCCCCCCHHHHHh
Confidence 9999999999999999999998899999987 99999999999999987644 6899999999999999 99999998
Q ss_pred HH
Q 019662 331 LK 332 (337)
Q Consensus 331 l~ 332 (337)
|+
T Consensus 247 l~ 248 (248)
T 1nlt_A 247 LE 248 (248)
T ss_dssp --
T ss_pred hC
Confidence 75
No 6
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.94 E-value=1.8e-26 Score=183.64 Aligned_cols=94 Identities=22% Similarity=0.289 Sum_probs=87.7
Q ss_pred eCCCccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEE
Q 019662 239 KPHDVYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFEVK 318 (337)
Q Consensus 239 ~~~~~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~ 318 (337)
++|+.|+|+|+||+++++|||.||++|+++.|+|+||. +.|+||+++++|+++||+|+|||. . +.+|||||+|+|.
T Consensus 2 kph~~F~R~G~DL~~~~~Isl~eAl~G~~i~v~tldG~-~~v~ip~g~~~G~~~rl~G~G~p~-~--~~~GDL~v~~~V~ 77 (109)
T 3i38_A 2 NAHPLFDIVGHNLEIVLPLAPWEAALGAKVTVPTLKES-ILLTVPPGSQAGQRLRIKGKGLVS-K--THTGDLFAVIKIV 77 (109)
T ss_dssp --CCCCEEETTEEEEEEEECHHHHHHCEEEEECCSSSC-EEEEECTTCCTTCEEEETTCSCBC-S--SCBCCEEEEEEEC
T ss_pred CCCCCeEEECCEEEEEEEcCHHHHhCCCEEEEEcCCCC-EEEeeCCCcCcCeEEEECCccCCC-C--CCCcCEEEEEEEE
Confidence 68999999999999999999999999999999999994 999999999999999999999997 3 2799999999999
Q ss_pred CCCCCCHHHHHHHHHHhC
Q 019662 319 FPTKLTPEQRAGLKRALG 336 (337)
Q Consensus 319 ~P~~l~~~~~~~l~~~l~ 336 (337)
||++|+++|+++|++++.
T Consensus 78 ~P~~Ls~~q~~~l~~l~~ 95 (109)
T 3i38_A 78 MPTKPDEKARELWQQLAA 95 (109)
T ss_dssp CCSSCCHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHHHHHHHh
Confidence 999999999999999863
No 7
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2e-25 Score=181.13 Aligned_cols=93 Identities=33% Similarity=0.579 Sum_probs=84.5
Q ss_pred ccccCCCceEEEEeeCHHHHhCCcEEEEecCCCcEEEEEcCCC--CCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECC
Q 019662 243 VYKRDSNDLIVNHKVSLAEALGGTSVSLITLDGRDLNIAVTDI--ISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFP 320 (337)
Q Consensus 243 ~f~r~g~dL~~~~~Isl~eAl~G~~~~i~~l~g~~~~v~i~~~--~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P 320 (337)
.|+|+|+||+++++|||.+|++|+++.|+|+||+.+.|+||++ +++|+++||+|+|||..+++ .+|||||+|+|.||
T Consensus 1 ~F~R~G~DL~~~~~Isl~eAllG~~i~v~tldG~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~-~~GDL~V~~~V~~P 79 (121)
T 1xao_A 1 SFKRDGDDLVYEAEIDLLTAIAGGEFALEHVSGDWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYG-GYGNLIIKFTIKFP 79 (121)
T ss_dssp CCEEETTEEEEEEEEEHHHHHHCEEEEEECTTSCEEEEEECTTSCCCTTCEEEETTCSCC-------CCCEEEEEEEECC
T ss_pred CceEECCeEEEEEEcCHHHHhCCCEEEEecCCCCEEEEEeCCCCeeCCCcEEEECCCCCCCCCCC-CCCCEEEEEEEECC
Confidence 4899999999999999999999999999999998899999988 99999999999999987643 78999999999999
Q ss_pred CC--CCHHHHHHHHHHhC
Q 019662 321 TK--LTPEQRAGLKRALG 336 (337)
Q Consensus 321 ~~--l~~~~~~~l~~~l~ 336 (337)
+. |+++|+++|+++++
T Consensus 80 ~~~~ls~~q~~~l~~l~~ 97 (121)
T 1xao_A 80 ENHFTSEENLKKLEEILP 97 (121)
T ss_dssp CTTCSCHHHHHHHHHHSC
T ss_pred CCCCCCHHHHHHHHHHcc
Confidence 99 99999999999987
No 8
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.90 E-value=7e-25 Score=173.13 Aligned_cols=75 Identities=59% Similarity=0.996 Sum_probs=70.4
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD 76 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~ 76 (337)
|..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.++|++|++||++|+||.+|+.||++|++++..
T Consensus 1 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 75 (103)
T 1bq0_A 1 AKQDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQ 75 (103)
T ss_dssp CCCCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCS
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhcc
Confidence 889999999999999999999999999999999999864 367899999999999999999999999999988764
No 9
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.90 E-value=3.5e-24 Score=160.19 Aligned_cols=74 Identities=54% Similarity=1.049 Sum_probs=69.8
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD 76 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~ 76 (337)
|+.|||+||||+++|+.++||+|||+|+++||||+++.. .+.+.|+.|++||++|+||.+|+.||++|++++.+
T Consensus 1 m~~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 74 (77)
T 1hdj_A 1 MGKDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEP--GAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKG 74 (77)
T ss_dssp CCCCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCT--THHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCS
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCHHHHHHHHHHccccccc
Confidence 899999999999999999999999999999999999863 57899999999999999999999999999988764
No 10
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.88 E-value=3.1e-23 Score=156.84 Aligned_cols=74 Identities=59% Similarity=1.046 Sum_probs=69.0
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK 75 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 75 (337)
..|||+||||+++|+.++||+|||+|+++||||+++...+.+.++|+.|++||++|+||.+|+.||++|+.++.
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~ 81 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS 81 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence 47999999999999999999999999999999999987667899999999999999999999999999987653
No 11
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.88 E-value=3.2e-23 Score=162.22 Aligned_cols=75 Identities=57% Similarity=1.042 Sum_probs=67.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD 76 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~ 76 (337)
|.|||+||||+++|+.++||+|||+|+++||||+++.+.+.+.++|+.|++||++|+||.+|+.||++|.+++.+
T Consensus 1 M~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~ 75 (99)
T 2lgw_A 1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTG 75 (99)
T ss_dssp CCCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC----
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 389999999999999999999999999999999998876678999999999999999999999999999888764
No 12
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=9e-23 Score=157.71 Aligned_cols=75 Identities=53% Similarity=0.982 Sum_probs=70.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD 76 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~ 76 (337)
..|||+||||+++|+.++||+|||+|+++||||+++.+.+.+.++|+.|++||++|+||.+|+.||++|.+++..
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~ 82 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRA 82 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCC
T ss_pred CcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccC
Confidence 369999999999999999999999999999999998776678999999999999999999999999999887764
No 13
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=1.1e-22 Score=155.98 Aligned_cols=74 Identities=49% Similarity=0.820 Sum_probs=69.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDM 77 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~ 77 (337)
..|||+||||+++|+.+|||+|||+|+++||||+++. +.+.++|+.|++||++|+||.+|+.||++|++++..+
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 79 (88)
T 2ctr_A 6 SGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSG 79 (88)
T ss_dssp CCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCS
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccC
Confidence 4799999999999999999999999999999999985 5789999999999999999999999999999887643
No 14
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.87 E-value=9.5e-23 Score=153.08 Aligned_cols=72 Identities=50% Similarity=0.831 Sum_probs=66.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccccc
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGL 74 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 74 (337)
..|||+||||+++|+.++||+|||+|+++||||+++.. +.+.++|+.|++||++|+||.+|+.||++|..+.
T Consensus 6 ~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 77 (79)
T 2dn9_A 6 SGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS 77 (79)
T ss_dssp CSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence 57999999999999999999999999999999999865 3688999999999999999999999999987543
No 15
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.86 E-value=1.5e-22 Score=156.50 Aligned_cols=72 Identities=53% Similarity=0.892 Sum_probs=66.9
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDM 77 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~ 77 (337)
..|||+||||+++|+.++||+|||+|+++||||+++.+ .++|++|++||++|+||.+|+.||++|++++..+
T Consensus 7 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 78 (92)
T 2o37_A 7 ETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKREIYDQYGLEAARSG 78 (92)
T ss_dssp CCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHTT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhcc
Confidence 47899999999999999999999999999999999875 4699999999999999999999999999887653
No 16
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.86 E-value=3.1e-22 Score=149.87 Aligned_cols=71 Identities=52% Similarity=0.878 Sum_probs=66.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccccc
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGL 74 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~ 74 (337)
..|||+||||+++|+.++||+|||+|+++||||+++. +.+.++|+.|++||++|+||.+|+.||++|+.+.
T Consensus 6 ~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 6 SGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS 76 (78)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 3689999999999999999999999999999999986 4688999999999999999999999999997653
No 17
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.86 E-value=2.8e-22 Score=153.66 Aligned_cols=71 Identities=51% Similarity=0.895 Sum_probs=66.0
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG 73 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 73 (337)
+..|||+||||+++|+.++||+|||+|+++||||+++. +.+.++|+.|++||++|+||.+|+.||++|+.+
T Consensus 15 ~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~ 85 (88)
T 2cug_A 15 LDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGP 85 (88)
T ss_dssp SSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS--TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCC
T ss_pred CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCC
Confidence 35799999999999999999999999999999999986 357899999999999999999999999999753
No 18
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.85 E-value=8.5e-22 Score=145.63 Aligned_cols=67 Identities=60% Similarity=1.019 Sum_probs=61.6
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccc
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEE 72 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~ 72 (337)
..|||+||||+++|+.++||+|||+|+++||||+++.. .+.|+.|++||++|+||.+|+.||++|++
T Consensus 7 ~~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 7 ETGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 46899999999999999999999999999999999864 47999999999999999999999999864
No 19
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.85 E-value=8e-22 Score=157.04 Aligned_cols=73 Identities=56% Similarity=0.966 Sum_probs=68.2
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK 75 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 75 (337)
..|||+||||+++|+.++||+|||+|+++||||+++.+ +++.++|++|++||++|+||.+|+.||++|..++.
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~~ 88 (109)
T 2ctw_A 16 GESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYGSLGLY 88 (109)
T ss_dssp SCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHHH
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHcCHHHHHHHHHhcccccc
Confidence 57999999999999999999999999999999999876 47899999999999999999999999999987654
No 20
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.85 E-value=5.2e-22 Score=158.93 Aligned_cols=73 Identities=26% Similarity=0.578 Sum_probs=67.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccC
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLK 75 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~ 75 (337)
..|||+||||+++|+.++||+|||+|+++||||+++.+ +.+.++|+.|++||++|+||.+|+.||++|++++.
T Consensus 19 ~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~~ 91 (112)
T 2ctq_A 19 TEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESRARYDHWRRSQMS 91 (112)
T ss_dssp CCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHHTCS
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhhccC
Confidence 47999999999999999999999999999999999865 36899999999999999999999999999987653
No 21
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.84 E-value=1.8e-21 Score=152.38 Aligned_cols=67 Identities=36% Similarity=0.606 Sum_probs=63.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcc
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQY 69 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 69 (337)
..|||+||||+++|+.++||+|||+|+++||||+++.+ +.+.++|++|++||++|+||.+|+.||++
T Consensus 16 ~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~ 82 (99)
T 2yua_A 16 RTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLRRKYDRG 82 (99)
T ss_dssp SSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHHHHTTSHHHHHHHHHT
T ss_pred ccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHh
Confidence 57899999999999999999999999999999999865 46889999999999999999999999984
No 22
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.81 E-value=9e-21 Score=147.00 Aligned_cols=70 Identities=33% Similarity=0.626 Sum_probs=63.8
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC-----hHHHHHHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND-----KKEAEARFKQISEAYEVLSDPQKRAIYDQYGE 71 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~-----~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~ 71 (337)
..|||+||||+++|+.+|||+|||+|+++||||+++.+ .+.+.++|+.|++||++|+||.+|+.||.+..
T Consensus 15 ~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 15 KKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp CSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 46999999999999999999999999999999998742 24688999999999999999999999998754
No 23
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.80 E-value=4.1e-20 Score=163.38 Aligned_cols=73 Identities=47% Similarity=0.895 Sum_probs=68.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCC
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKD 76 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~ 76 (337)
+|||+||||+++|+.++||+|||+||++||||+++.+ +++.++|+.|++||++|+||.+|+.||++|+.++..
T Consensus 2 ~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~ 74 (210)
T 3apq_A 2 QNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLED 74 (210)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHhccccccc
Confidence 7999999999999999999999999999999999865 368899999999999999999999999999987754
No 24
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.79 E-value=2.7e-20 Score=148.23 Aligned_cols=70 Identities=41% Similarity=0.675 Sum_probs=64.7
Q ss_pred CCCcccccCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC--ChHHHHHHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662 2 GMDYYNILKVNKNA-TEDDLKKSYRKLAMKWHPDKNPN--DKKEAEARFKQISEAYEVLSDPQKRAIYDQYGE 71 (337)
Q Consensus 2 ~~~~y~iLgv~~~a-~~~~Ik~ayr~la~~~hPd~~~~--~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~ 71 (337)
..|||+||||+++| +.++||+|||+|+++||||+++. ..+.+.++|++|++||++|+||.+|+.||+++.
T Consensus 14 ~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 14 LENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 47999999999999 99999999999999999999975 234688999999999999999999999999885
No 25
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.76 E-value=3.6e-19 Score=150.54 Aligned_cols=70 Identities=33% Similarity=0.610 Sum_probs=63.7
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh-----HHHHHHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDK-----KEAEARFKQISEAYEVLSDPQKRAIYDQYGE 71 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~-----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~ 71 (337)
++|||+||||+++|+.++||+|||+|+++||||+++.+. +.|.++|+.|++||++|+||.+|+.||.++.
T Consensus 9 ~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 9 KKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 479999999999999999999999999999999987652 2478999999999999999999999998654
No 26
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.76 E-value=2.4e-19 Score=137.72 Aligned_cols=62 Identities=34% Similarity=0.490 Sum_probs=57.5
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhh
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAI 65 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~ 65 (337)
..|||+||||+++|+.+|||+|||+|+++||||+++.. .+.++|++|++||++|+|+.+|+.
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~--~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAP--GSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCT--THHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc--cHHHHHHHHHHHHHHHCCcccccC
Confidence 47999999999999999999999999999999999863 578999999999999999998863
No 27
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.74 E-value=7e-19 Score=131.73 Aligned_cols=65 Identities=15% Similarity=0.335 Sum_probs=58.8
Q ss_pred CCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccc
Q 019662 3 MDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEG 73 (337)
Q Consensus 3 ~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~ 73 (337)
.++|+||||+++ |+.++||+|||+||++||||++++ .++|++|++||++|+|+.+|.. |.||..+
T Consensus 11 ~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~ 77 (79)
T 1faf_A 11 ERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR-MNLGGTG 77 (79)
T ss_dssp HHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCC
T ss_pred HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH-HhcCCcc
Confidence 368999999999 999999999999999999999864 4799999999999999999988 5677654
No 28
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.74 E-value=3.8e-19 Score=135.72 Aligned_cols=61 Identities=28% Similarity=0.469 Sum_probs=57.5
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhh
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r 63 (337)
.++|+||||+++|+.+|||+|||+||++||||+|+.+.+.+.++|++|++||++|+|...|
T Consensus 16 ~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r 76 (88)
T 1iur_A 16 KEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFL 76 (88)
T ss_dssp HHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhccc
Confidence 5799999999999999999999999999999999987667899999999999999998777
No 29
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.73 E-value=1.4e-19 Score=144.59 Aligned_cols=65 Identities=25% Similarity=0.451 Sum_probs=60.8
Q ss_pred CCcccccCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccccc
Q 019662 3 MDYYNILKVNKNATE--DDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEE 72 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~--~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~ 72 (337)
.+||+||||+++|+. ++||+|||+||++||||+++. .++|++|++||++|+||.+|+.||.+|..
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~~~~~~~~ 74 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGGF 74 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCSCC
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHHhhhcccc
Confidence 589999999999999 999999999999999999986 37999999999999999999999998853
No 30
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.73 E-value=3.6e-19 Score=151.87 Aligned_cols=64 Identities=25% Similarity=0.468 Sum_probs=57.7
Q ss_pred CCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662 3 MDYYNILKVNKNAT--EDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGE 71 (337)
Q Consensus 3 ~~~y~iLgv~~~a~--~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~ 71 (337)
.|||+||||+++|+ .+|||+|||+||+++|||++++ +++|++|++||++|+||.+|+.||+||.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~-----~e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---C-----CTTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 58999999999998 6999999999999999999976 3689999999999999999999999996
No 31
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.70 E-value=4.6e-18 Score=145.73 Aligned_cols=68 Identities=25% Similarity=0.403 Sum_probs=61.7
Q ss_pred CCcccccCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhccc
Q 019662 3 MDYYNILKVNKNA--TEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQYG 70 (337)
Q Consensus 3 ~~~y~iLgv~~~a--~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G 70 (337)
+|||++|||++++ +.++||+|||+|+++||||+++... ..|.++|+.|++||++|+||.+|+.||...
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 74 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSL 74 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHh
Confidence 3899999999999 9999999999999999999998653 246789999999999999999999999853
No 32
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.70 E-value=9e-18 Score=144.39 Aligned_cols=68 Identities=28% Similarity=0.487 Sum_probs=61.3
Q ss_pred CCCcccccCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCChH----HHHHHHHHHHHHHhhcCChhhhhhhhcc
Q 019662 2 GMDYYNILKVNKNAT--EDDLKKSYRKLAMKWHPDKNPNDKK----EAEARFKQISEAYEVLSDPQKRAIYDQY 69 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~--~~~Ik~ayr~la~~~hPd~~~~~~~----~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 69 (337)
.+|||+||||+++|+ .++||+|||+|+++||||+++.... .|.++|+.|++||++|+||.+|+.||..
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~ 76 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLS 76 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHH
Confidence 479999999999998 9999999999999999999876531 2678999999999999999999999974
No 33
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.68 E-value=1.9e-17 Score=145.96 Aligned_cols=67 Identities=24% Similarity=0.446 Sum_probs=60.3
Q ss_pred CCCcccccCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCCh----HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 2 GMDYYNILKVNKN--ATEDDLKKSYRKLAMKWHPDKNPNDK----KEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 2 ~~~~y~iLgv~~~--a~~~~Ik~ayr~la~~~hPd~~~~~~----~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
..|||+||||+++ ++.++||+|||+|+++||||+++... ..|.++|+.|++||++|+||.+|+.||.
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~ 114 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLL 114 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 4699999999986 79999999999999999999997642 2467899999999999999999999995
No 34
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.68 E-value=7.5e-18 Score=144.59 Aligned_cols=64 Identities=22% Similarity=0.408 Sum_probs=59.1
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChH--HHHHHHHHHHHHHhhcCChhhhhhh
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKK--EAEARFKQISEAYEVLSDPQKRAIY 66 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~--~~~~~f~~i~~Ay~~L~d~~~r~~y 66 (337)
.|||++|||+++|+.++||+|||+||++||||+++.... .|.++|+.|++||++|+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 589999999999999999999999999999999976532 3889999999999999999999987
No 35
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.68 E-value=7.1e-18 Score=129.14 Aligned_cols=57 Identities=21% Similarity=0.352 Sum_probs=51.8
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCC
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDK--KEAEARFKQISEAYEVLSD 59 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d 59 (337)
.++|++|||+++|+.+|||+|||+||++||||+|+++. ..|+++|+.|++||++|.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999998653 2488999999999999974
No 36
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.66 E-value=2e-17 Score=130.53 Aligned_cols=59 Identities=24% Similarity=0.393 Sum_probs=52.1
Q ss_pred CCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCC------hHHHHHHHHHHHHHHhhcCChh
Q 019662 2 GMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPND------KKEAEARFKQISEAYEVLSDPQ 61 (337)
Q Consensus 2 ~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~------~~~~~~~f~~i~~Ay~~L~d~~ 61 (337)
+.|||+||+++. |+.++||+|||+||++||||+|+.. ...|+++|+.|++||++|+|+.
T Consensus 40 ~~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 40 GSGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp TSCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred cCCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 469999999996 9999999999999999999998631 1247899999999999999975
No 37
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.63 E-value=5.6e-17 Score=140.04 Aligned_cols=65 Identities=26% Similarity=0.505 Sum_probs=59.1
Q ss_pred CCCccccc------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhccc
Q 019662 2 GMDYYNIL------KVNK-NATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYG 70 (337)
Q Consensus 2 ~~~~y~iL------gv~~-~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G 70 (337)
..|||+|| |+++ +|+.++||+|||+|+++||||+++. +.++|+.|++||++|+||.+|+.||...
T Consensus 10 ~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 10 TSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp SCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 47999999 4665 9999999999999999999999985 5689999999999999999999999843
No 38
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.63 E-value=2.5e-17 Score=172.12 Aligned_cols=76 Identities=45% Similarity=0.845 Sum_probs=40.9
Q ss_pred CCCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcccccccCCC
Q 019662 1 MGMDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQYGEEGLKDM 77 (337)
Q Consensus 1 m~~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~G~~~~~~~ 77 (337)
++.|||++|||+++|+.+|||+|||+||++||||+++.+ +.+.++|++|++||++|+||.+|+.||+||++++...
T Consensus 19 ~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~ 94 (780)
T 3apo_A 19 HDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 94 (780)
T ss_dssp ----CHHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC--------
T ss_pred CCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccC
Confidence 357999999999999999999999999999999999765 4688999999999999999999999999999887653
No 39
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.62 E-value=1.1e-16 Score=117.32 Aligned_cols=56 Identities=27% Similarity=0.345 Sum_probs=50.7
Q ss_pred CCcccccCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhh
Q 019662 3 MDYYNILKVNK-NATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKR 63 (337)
Q Consensus 3 ~~~y~iLgv~~-~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r 63 (337)
.++|+||||++ +|+.++||+|||+|+++||||++.+ .++|++|++||++|+++..|
T Consensus 14 ~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 14 KEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp HHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhc
Confidence 47999999999 7999999999999999999999753 36999999999999988655
No 40
>3i38_A Putative chaperone DNAJ; structural genomics, protein structure initiative, midwest center for structural genomics, MCSG; 2.30A {Klebsiella pneumoniae subsp}
Probab=99.40 E-value=1.1e-13 Score=109.74 Aligned_cols=82 Identities=20% Similarity=0.180 Sum_probs=71.3
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFVI 236 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~i 236 (337)
|.+.|++++++|||.||++|+++.|++. +| .++|+||+|+++|++++++|+|++..+ .+|||||+|
T Consensus 9 R~G~DL~~~~~Isl~eAl~G~~i~v~tl------dG-------~~~v~ip~g~~~G~~~rl~G~G~p~~~-~~GDL~v~~ 74 (109)
T 3i38_A 9 IVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSKT-HTGDLFAVI 74 (109)
T ss_dssp EETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCSS-CBCCEEEEE
T ss_pred EECCEEEEEEEcCHHHHhCCCEEEEEcC------CC-------CEEEeeCCCcCcCeEEEECCccCCCCC-CCcCEEEEE
Confidence 5788999999999999999999888775 66 578999999999999999999999744 789999999
Q ss_pred EeeCCCccccCCCceE
Q 019662 237 DEKPHDVYKRDSNDLI 252 (337)
Q Consensus 237 ~v~~~~~f~r~g~dL~ 252 (337)
+|.-+..++.+..+++
T Consensus 75 ~V~~P~~Ls~~q~~~l 90 (109)
T 3i38_A 75 KIVMPTKPDEKARELW 90 (109)
T ss_dssp EECCCSSCCHHHHHHH
T ss_pred EEECCCCCCHHHHHHH
Confidence 9998887776554443
No 41
>1xao_A YDJ1, mitochondrial protein import protein MAS5; beta sheets, chaperone; 2.07A {Saccharomyces cerevisiae}
Probab=99.34 E-value=6.1e-13 Score=107.45 Aligned_cols=83 Identities=16% Similarity=0.192 Sum_probs=69.1
Q ss_pred CCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCCC-CCccEE
Q 019662 157 RKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQ-LPADLV 233 (337)
Q Consensus 157 ~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~~-~~GDL~ 233 (337)
|+|.|++++++|||.+|++|+++.|++. +| +.++|+|||| +++|++++++|+|++..++ .+||||
T Consensus 4 R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~v~ip~g~v~~~G~~~rl~G~Gmp~~~~~~~GDL~ 71 (121)
T 1xao_A 4 RDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNLI 71 (121)
T ss_dssp EETTEEEEEEEEEHHHHHHCEEEEEECT------TS------CEEEEEECTTSCCCTTCEEEETTCSCC------CCCEE
T ss_pred EECCeEEEEEEcCHHHHhCCCEEEEecC------CC------CEEEEEeCCCCeeCCCcEEEECCCCCCCCCCCCCCCEE
Confidence 5688999999999999999999888876 77 4689999999 9999999999999996443 689999
Q ss_pred EEEEeeCCCc--cccCCCce
Q 019662 234 FVIDEKPHDV--YKRDSNDL 251 (337)
Q Consensus 234 v~i~v~~~~~--f~r~g~dL 251 (337)
|+++|..+.. ++.+..++
T Consensus 72 V~~~V~~P~~~~ls~~q~~~ 91 (121)
T 1xao_A 72 IKFTIKFPENHFTSEENLKK 91 (121)
T ss_dssp EEEEEECCCTTCSCHHHHHH
T ss_pred EEEEEECCCCCCCCHHHHHH
Confidence 9999998876 66655444
No 42
>3agx_A DNAJ homolog subfamily B member 1; chaperone; 1.85A {Homo sapiens} PDB: 3agy_A 3agz_A 2qld_A
Probab=99.11 E-value=3.9e-11 Score=103.56 Aligned_cols=83 Identities=19% Similarity=0.235 Sum_probs=71.4
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC--CCCccEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV 233 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~ 233 (337)
.|.+.|++++++|||.+|++|+++.|++. +| +.++|.||+|+++|++++++|+|++..+ +.+||||
T Consensus 89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~i~i~~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~ 156 (181)
T 3agx_A 89 KRDGSDVIYPARISLREALCGCTVNVPTL------DG------RTIPVVFKDVIRPGMRRKVPGEGLPLPKTPEKRGDLI 156 (181)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TS------CEEEEEECSCCCTTCEEEETTCSCBCSSSTTSBCCEE
T ss_pred eeeCCcEEEEEEcCHHHHhCCCEEEeECC------CC------CEEEEECCCccCCCcEEEECCcCCCcCCCCCCcCCEE
Confidence 46789999999999999999999888876 77 3688999999999999999999999643 4579999
Q ss_pred EEEEeeCCCccccCCCc
Q 019662 234 FVIDEKPHDVYKRDSND 250 (337)
Q Consensus 234 v~i~v~~~~~f~r~g~d 250 (337)
|+++|.-+..++.+..+
T Consensus 157 V~~~V~~P~~ls~~q~~ 173 (181)
T 3agx_A 157 IEFEVIFPERIPQTSRT 173 (181)
T ss_dssp EEEEEECCSCCCHHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 99999988776655443
No 43
>1c3g_A Heat shock protein 40; beta sheets, short helices, chaperone; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 PDB: 2b26_A
Probab=99.11 E-value=3.6e-11 Score=102.75 Aligned_cols=83 Identities=16% Similarity=0.228 Sum_probs=71.3
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC--CCCccEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV 233 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~ 233 (337)
.|.+.|++++++|||.+|++|+++.|+.. +| +.++|.||+|+++|++++++|+|++..+ +.+||||
T Consensus 83 ~R~G~DL~~~~~Isl~eAllG~~~~v~tl------dG------~~~~i~i~~~t~~g~~~rl~g~G~p~~~~~~~~GDL~ 150 (170)
T 1c3g_A 83 KRDGDDLIYTLPLSFKESLLGFSKTIQTI------DG------RTLPLSRVQPVQPSQTSTYPGQGMPTPKNPSQRGNLI 150 (170)
T ss_dssp EEETTEEEEEECCBHHHHHHCEEEEEECS------SS------CEEEEEESSCCCTTCEEECTTCSCBCSSCTTSBCCEE
T ss_pred EEeCCcEeEEEEcCHHHHhCCCeEEeeCC------CC------CEEEEECCCccCCCcEEEEeCCCCCcCCCCCCCCCEE
Confidence 36789999999999999999999988876 77 3688999999999999999999998643 3579999
Q ss_pred EEEEeeCCCccccCCCc
Q 019662 234 FVIDEKPHDVYKRDSND 250 (337)
Q Consensus 234 v~i~v~~~~~f~r~g~d 250 (337)
|+++|.-+..++.+...
T Consensus 151 V~~~V~~P~~Ls~~q~~ 167 (170)
T 1c3g_A 151 VKYKVDYPISLNDAQKR 167 (170)
T ss_dssp EEECCBCCSSCCTTHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 99999988877655443
No 44
>2q2g_A HSP40 protein, heat shock 40 kDa protein, putative (fragment); malaria, structural genomics, structural genomics consortium, SGC; 1.90A {Cryptosporidium parvum iowa II}
Probab=99.09 E-value=5.7e-11 Score=102.48 Aligned_cols=83 Identities=18% Similarity=0.160 Sum_probs=71.2
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCC--CCCccEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPN--QLPADLV 233 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~--~~~GDL~ 233 (337)
.|.+.|++++++|||.||++|+++.|++. +| +.++|.||+|+++|++++++|+|++..+ +.+||||
T Consensus 89 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~v~i~ip~~t~~g~~~rl~g~Gmp~~~~~~~~GDL~ 156 (180)
T 2q2g_A 89 TRDDCHLIMKVTIPLVRALTGFTCPVTTL------DN------RNLQIPIKEIVNPKTRKIVPNEGMPIKNQPGQKGDLI 156 (180)
T ss_dssp EEETTEEEEEEEEEHHHHHHCEEEEEECT------TC------CEEEEEECSCCCTTCEEEETTCSCBCSSSTTCBCCEE
T ss_pred EEcCCEEEEEEEcCHHHHhCCCEEEeeCC------CC------CEEEEECCCccCCCEEEEECCcCCCcCCCCCCcCCEE
Confidence 46789999999999999999999888876 77 3688999999999999999999998643 4579999
Q ss_pred EEEEeeCCCccccCCCc
Q 019662 234 FVIDEKPHDVYKRDSND 250 (337)
Q Consensus 234 v~i~v~~~~~f~r~g~d 250 (337)
|+++|.-+..++.+..+
T Consensus 157 V~~~V~~P~~Ls~~q~~ 173 (180)
T 2q2g_A 157 LEFDICFPKSLTPEQKK 173 (180)
T ss_dssp EEEEEECCSCCCHHHHH
T ss_pred EEEEEECCCCCCHHHHH
Confidence 99999988776655433
No 45
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.07 E-value=6.9e-11 Score=113.00 Aligned_cols=66 Identities=50% Similarity=0.888 Sum_probs=57.0
Q ss_pred CCcccccCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCh--HHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 3 MDYYNILKVNKNATEDDLKKSYRKLAMKWHPDKNPNDK--KEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 3 ~~~y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~~~~~~--~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
.++|.+||+.+.++.++|+++|+++++++|||+.+.+. +.++++|+.|++||++|+|+.+|..||+
T Consensus 382 ~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 382 RDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp CCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred hhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 58999999999999999999999999999999998643 4688999999999999999999999996
No 46
>1nlt_A Protein YDJ1, mitochondrial protein import protein MAS5; beta-strands, chaperone, heat shock, mitochondrion; 2.70A {Saccharomyces cerevisiae} SCOP: b.4.1.1 b.4.1.1 g.54.1.1
Probab=99.06 E-value=1.1e-10 Score=105.78 Aligned_cols=85 Identities=15% Similarity=0.209 Sum_probs=67.2
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCC--CcCCCEEEECCCCCCCCCC-CCccE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPG--WKKGTKITFPDKGNEQPNQ-LPADL 232 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G--~~~G~~i~l~g~G~~~~~~-~~GDL 232 (337)
.|.+.||+++++|||.||++|+++.|++. +| +.++|+|||| +++|++++|+|+|++..+. .+|||
T Consensus 158 ~R~G~DL~~~~~Isl~eAllG~~i~v~tl------dG------~~~~i~ip~g~vt~~g~~~rl~g~Gmp~~~~~~~GDL 225 (248)
T 1nlt_A 158 KRDGDDLVYEAEIDLLTAIAGGEFALEHV------SG------DWLKVGIVPGEVIAPGMRKVIEGKGMPIPKYGGYGNL 225 (248)
T ss_dssp EEETTEEEEEEEEEHHHHHHCBCCEEECS------SS------CEEECCBCTTTTCSTTCEEEETTCSCBCSSSCSBCCE
T ss_pred eeeCCEEEEEEEeCHHHHhcCCEEEEeCC------CC------CEEEEEeCCCCeeCCCeEEEEcCCCCccCCCCCcCCE
Confidence 46789999999999999999999999877 77 4689999999 9999999999999986433 57999
Q ss_pred EEEEEeeCCCc--cccCCCceE
Q 019662 233 VFVIDEKPHDV--YKRDSNDLI 252 (337)
Q Consensus 233 ~v~i~v~~~~~--f~r~g~dL~ 252 (337)
||+|+|.-+.. ++.+..+|+
T Consensus 226 ~V~~~V~~P~~~~Ls~~q~~~l 247 (248)
T 1nlt_A 226 IIKFTIKDPENHFTSEENLKKL 247 (248)
T ss_dssp EEEEEEECCC------------
T ss_pred EEEEEEECCCCCCCCHHHHHhh
Confidence 99999998877 776665553
No 47
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=98.97 E-value=2.1e-10 Score=107.86 Aligned_cols=83 Identities=19% Similarity=0.173 Sum_probs=72.0
Q ss_pred CCCCCCeeeeeeechhhheeCceEEEEEEEEEEcCCCeeeecceEEEEEeCCCCcCCCEEEECCCCCCCCCCCCccEEEE
Q 019662 156 PRKPPPVESKLPCSLEELYSGSTRKMKISRTVVDANGRQTPESEILTIDVKPGWKKGTKITFPDKGNEQPNQLPADLVFV 235 (337)
Q Consensus 156 ~~~~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~~g~G~~~~~~~~~~V~Ip~G~~~G~~i~l~g~G~~~~~~~~GDL~v~ 235 (337)
.|.+.||+++++|+|.||++|+++.|++. +| .++|+||+|+++|++++|+|+|++.. ..+|||||+
T Consensus 228 ~R~G~DL~~~~~Isl~eAllG~~v~VptL------dG-------~v~l~ip~gt~~g~~~rl~G~GmP~~-~~rGDL~v~ 293 (329)
T 3lz8_A 228 DIVGHNLEIVLPLAPWEAALGAKVTVPTL------KE-------SILLTVPPGSQAGQRLRIKGKGLVSK-THTGDLFAV 293 (329)
T ss_dssp EEETTEEEEEEEECHHHHHHCEEEEECCS------SS-------CEEEEECTTCCTTCEEEETTCSCBCS-SCBCCEEEE
T ss_pred EEcCCcEEEEEECCHHHHcCCCeEEEECC------CC-------CEEEEECCCCCCCCEEEEcCCCCCCC-CCCCCEEEE
Confidence 36789999999999999999999988887 77 36899999999999999999999865 468999999
Q ss_pred EEeeCCCccccCCCceE
Q 019662 236 IDEKPHDVYKRDSNDLI 252 (337)
Q Consensus 236 i~v~~~~~f~r~g~dL~ 252 (337)
|+|.-++.++.+...|+
T Consensus 294 ~~V~~P~~l~~~q~~~l 310 (329)
T 3lz8_A 294 IKIVMPTKPDEKARELW 310 (329)
T ss_dssp EEECCCSSCCHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 99998887765555443
No 48
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.81 E-value=3.4e-09 Score=75.47 Aligned_cols=51 Identities=16% Similarity=0.104 Sum_probs=45.0
Q ss_pred cccccCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCCh
Q 019662 5 YYNILKVNKN---ATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDP 60 (337)
Q Consensus 5 ~y~iLgv~~~---a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~ 60 (337)
-|.||||+++ ++.++|++|||+|...+|||+..+ .....+|++|++.|...
T Consensus 6 A~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS-----~yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 6 SCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGS-----FYLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCC-----HHHHHHHHHHHHHHHHH
T ss_pred HHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHHHHH
Confidence 4789999999 999999999999999999999754 46778999999998643
No 49
>2ctt_A DNAJ homolog subfamily A member 3; ZING finger, beta-hairpin, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=89.56 E-value=0.025 Score=43.50 Aligned_cols=30 Identities=7% Similarity=0.120 Sum_probs=25.5
Q ss_pred CCCeeeeeeechhhheeCceEEEEEEEEEE
Q 019662 159 PPPVESKLPCSLEELYSGSTRKMKISRTVV 188 (337)
Q Consensus 159 ~~d~~~~l~vsl~e~~~G~~~~i~~~r~~~ 188 (337)
+.++.+.|.|||+|||+|.+++|.+.+.+.
T Consensus 1 ~~~~~~~l~vslee~~~G~~~~i~~~~~~~ 30 (104)
T 2ctt_A 1 GSSGSSGMELTFNQAAKGVNKEFTVNIMDT 30 (104)
T ss_dssp CCCCCCCCCCCCSSCCSSSCTTCCSSCCEE
T ss_pred CCceEEEEEEEHHHHcCCCEEEEEeeeeeE
Confidence 357888999999999999999988877654
No 50
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=60.51 E-value=12 Score=26.65 Aligned_cols=55 Identities=11% Similarity=0.289 Sum_probs=40.6
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCCh-HHHHHHHHHHHHHHhhcCC-hhhhhhhhccc
Q 019662 15 ATEDDLKKSYRKLAMKWHPDKNPNDK-KEAEARFKQISEAYEVLSD-PQKRAIYDQYG 70 (337)
Q Consensus 15 a~~~~Ik~ayr~la~~~hPd~~~~~~-~~~~~~f~~i~~Ay~~L~d-~~~r~~yD~~G 70 (337)
.-+..++.+|+.+.+...|....... +.+..+|..-. +|..+.+ ..++.+|+.|=
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 35667889999999988888876653 34566666555 7999976 56778999874
No 51
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=47.51 E-value=30 Score=23.36 Aligned_cols=49 Identities=14% Similarity=0.297 Sum_probs=34.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHH---HHHHhhcCC-hh-hhhhhhccc
Q 019662 18 DDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQI---SEAYEVLSD-PQ-KRAIYDQYG 70 (337)
Q Consensus 18 ~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i---~~Ay~~L~d-~~-~r~~yD~~G 70 (337)
+|..+||.+|.+...-|-+=. =++..+.| ..-|.+|.| |. ++++|+.|-
T Consensus 3 eEae~aF~~lL~~~~V~s~ws----weqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWS----FSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCC----HHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCc----HHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 577899999999876655533 23445555 458999997 65 677888873
No 52
>2pi2_E Replication protein A 14 kDa subunit; FULL-length RPA14/32, ssDNA binding protein, OB-fold, dioxan replication, DNA binding protein; 2.00A {Homo sapiens} SCOP: b.40.4.3 PDB: 2pqa_B 2z6k_C
Probab=36.85 E-value=1.6e+02 Score=23.40 Aligned_cols=64 Identities=11% Similarity=0.056 Sum_probs=47.2
Q ss_pred CCcEEEEecCCCcEEEEEcCC--CCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEEEECCCC---CCHHHHHHHHHH
Q 019662 264 GGTSVSLITLDGRDLNIAVTD--IISPGFELGIPGEGMPIAREPGNRGDLRIKFEVKFPTK---LTPEQRAGLKRA 334 (337)
Q Consensus 264 ~G~~~~i~~l~g~~~~v~i~~--~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~v~~P~~---l~~~~~~~l~~~ 334 (337)
.|.++.+.+.||..|+|..++ ....+..+.|.|+--+ .+.+.+.--+.|... ++.+..+.+-++
T Consensus 58 ~G~~~~l~s~Dg~~VtV~l~~pL~~~~~~~VEViG~V~~-------~~tI~~~~~~~fGd~~~~fD~~~yn~lv~l 126 (142)
T 2pi2_E 58 TGKMFILSDGEGKNGTIELMEPLDEEISGIVEVVGRVTA-------KATILCTSYVQFKEDSHPFDLGLYNEAVKI 126 (142)
T ss_dssp TSSEEEEECTTSCEEEEECSSCCSSCCCSEEEEEEEECT-------TSCEEEEEEEECCCSSSCCCHHHHHHHHHH
T ss_pred CCCEEEEEeCCCcEEEEEeCCCCCccCCCEEEEEEEECC-------CCcEEEEEEEecCCCccccCHHHHHHHHHH
Confidence 577899999999989998754 3455778888887432 366777778899887 887766555444
No 53
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=36.28 E-value=71 Score=22.21 Aligned_cols=53 Identities=21% Similarity=0.364 Sum_probs=34.0
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCChHHHHHHHHHHH--HHHhhcCCh-hhhhhhhccc
Q 019662 14 NATEDDLKKSYRKLAMKWHPDKNPNDKKEAEARFKQIS--EAYEVLSDP-QKRAIYDQYG 70 (337)
Q Consensus 14 ~a~~~~Ik~ayr~la~~~hPd~~~~~~~~~~~~f~~i~--~Ay~~L~d~-~~r~~yD~~G 70 (337)
-++.+|.+.+|++|...++-+-.-. .... ...|. .-|.+|.++ .++++|+.|=
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~t---We~~-~~~i~~DpRY~al~~~~eRk~~F~ey~ 66 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNAS---WEQA-MKMIINDPRYSALAKLSEKKQAFNAYK 66 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTCC---HHHH-HHHHHTSGGGGGCSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCCC---HHHH-HHHHccCccccccCCHHHHHHHHHHHH
Confidence 5689999999999999875433321 2111 12232 368888874 5677888763
No 54
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=28.30 E-value=90 Score=20.83 Aligned_cols=42 Identities=21% Similarity=0.316 Sum_probs=30.3
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 21 KKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
.+.+|...+.-||+.. ..+..+.|.+.+..|++.++....++
T Consensus 14 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~~~ 55 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLH------NAELSKMLGKSWKALTLAEKRPFVEE 55 (71)
T ss_dssp HHHHHHHHHTTCTTSC------HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 3456777777888765 24677888999999998777655543
No 55
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=26.83 E-value=1.1e+02 Score=23.86 Aligned_cols=25 Identities=20% Similarity=0.121 Sum_probs=18.3
Q ss_pred HHHHHHHHHHhhcCChhhhhhhhcccc
Q 019662 45 ARFKQISEAYEVLSDPQKRAIYDQYGE 71 (337)
Q Consensus 45 ~~f~~i~~Ay~~L~d~~~r~~yD~~G~ 71 (337)
+.|..|.+-|. .||.-+..||++|.
T Consensus 100 e~~~~L~~mYv--~D~rF~~~~d~~~~ 124 (143)
T 1ny9_A 100 EMHTCLGEMYV--SDERFTRNIDAAKP 124 (143)
T ss_dssp HHHHHHHHHTT--STHHHHHHHGGGST
T ss_pred HHHHHHHHHHh--cCHHHHHhHcccCh
Confidence 45666666663 78999999999753
No 56
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=25.69 E-value=1.1e+02 Score=20.75 Aligned_cols=42 Identities=14% Similarity=0.281 Sum_probs=29.6
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 21 KKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
.+.+|...+.-||+.+.. +..+.|.+.+..|++.++....+.
T Consensus 16 ~~~~r~~~~~~~p~~~~~------eisk~lg~~Wk~ls~~eK~~y~~~ 57 (76)
T 1hry_A 16 SRDQRRKMALENPRMRNS------EISKQLGYQWKMLTEAEKWPFFQE 57 (76)
T ss_dssp HHHHHHHHHHHCSCCSSS------HHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCHH------HHHHHHHhHHHhCCHHHHHHHHHH
Confidence 345666677789987643 466788899999997776655443
No 57
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=25.37 E-value=1.3e+02 Score=20.87 Aligned_cols=41 Identities=17% Similarity=0.363 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 22 KSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+.+|...+.-||+.. ..+..+.|.+.+..|++.++...++.
T Consensus 17 ~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~y~~~ 57 (81)
T 1i11_A 17 KDERRKILQAFPDMH------NSNISKILGSRWKAMTNLEKQPYYEE 57 (81)
T ss_dssp HHHHHHHHTTCSSCC------HHHHHHHHHHHHTTSCSGGGHHHHHH
T ss_pred HHHHHHHHHHCCCCC------HHHHHHHHHhhhhhCCHHHHHHHHHH
Confidence 455666666788764 34677899999999998887665554
No 58
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=24.97 E-value=1.2e+02 Score=21.13 Aligned_cols=42 Identities=24% Similarity=0.279 Sum_probs=30.4
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 21 KKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
.+.+|...+.-||+.+.. +..+.|.+.+..|++.++....+.
T Consensus 19 ~~~~r~~~~~~~p~~~~~------eisk~lg~~Wk~ls~~eK~~y~~~ 60 (82)
T 1wz6_A 19 CKRHRSLVRQEHPRLDNR------GATKILADWWAVLDPKEKQKYTDM 60 (82)
T ss_dssp HHHHHHHHHHHCSSSCTT------HHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHH------HHHHHHHHHHhhCCHHHHHHHHHH
Confidence 345677777789986643 567788999999998776655554
No 59
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=24.27 E-value=1.5e+02 Score=21.13 Aligned_cols=41 Identities=20% Similarity=0.251 Sum_probs=30.4
Q ss_pred HHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 22 KSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+.+|...+.-||+.. ..+..+.|.+.|..|++.++....+.
T Consensus 20 ~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~Y~~~ 60 (92)
T 2crj_A 20 NERREQIRTRHPDLP------FPEITKMLGAEWSKLQPAEKQRYLDE 60 (92)
T ss_dssp HHHHHHHHHHCTTCC------HHHHHHHHHHHHHTCCTTHHHHHHHH
T ss_pred HHHHHHHHHHCCCCC------HHHHHHHHHHHHHcCCHHHHHHHHHH
Confidence 456666777888865 34677889999999998887665554
No 60
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=23.63 E-value=1.3e+02 Score=23.37 Aligned_cols=44 Identities=25% Similarity=0.331 Sum_probs=31.6
Q ss_pred EEEcCCCCCCCcEEEEcCCCcCCCCC--------CCCCCcEEEEEEEECCCC
Q 019662 279 NIAVTDIISPGFELGIPGEGMPIARE--------PGNRGDLRIKFEVKFPTK 322 (337)
Q Consensus 279 ~v~i~~~~~~g~~~rl~g~G~p~~~~--------~~~~GdL~v~~~v~~P~~ 322 (337)
.-.||.+.++|+.++|+|.=.+.... .....|+-++|++.|.++
T Consensus 9 ~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~~~ 60 (138)
T 3zxf_A 9 KSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLDTS 60 (138)
T ss_dssp EEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETTTT
T ss_pred EeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcCCC
Confidence 45678889999999999874443221 113569999999999763
No 61
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=23.27 E-value=41 Score=26.60 Aligned_cols=30 Identities=20% Similarity=0.285 Sum_probs=25.2
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhCCCC
Q 019662 6 YNILKVNKNATEDDLKKSYRKLAMKWHPDK 35 (337)
Q Consensus 6 y~iLgv~~~a~~~~Ik~ayr~la~~~hPd~ 35 (337)
+..|-|....+.+|++++-..+..++||+-
T Consensus 35 l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 35 LKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 567777888899999999999888999963
No 62
>2r0h_A CGL3 lectin; galectin-related, sugar binding protein, chitotriose, chitooligosaccharides; HET: CTO; 1.90A {Coprinus cinereus} PDB: 2r0f_A*
Probab=22.95 E-value=1.8e+02 Score=23.73 Aligned_cols=21 Identities=24% Similarity=0.302 Sum_probs=18.8
Q ss_pred EEEEeCCCCcCCCEEEECCCC
Q 019662 201 LTIDVKPGWKKGTKITFPDKG 221 (337)
Q Consensus 201 ~~V~Ip~G~~~G~~i~l~g~G 221 (337)
.++.|+.|+++|+.|.++|.-
T Consensus 9 ~~~~L~~~L~~G~~i~I~G~v 29 (164)
T 2r0h_A 9 STVDLSEPLKDNGIIVFQSDK 29 (164)
T ss_dssp EEEECSSCCCTTCEEEEECSC
T ss_pred eeEECCCCccCCCEEEEEEEe
Confidence 468999999999999999974
No 63
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=22.39 E-value=1.5e+02 Score=20.52 Aligned_cols=42 Identities=21% Similarity=0.316 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 21 KKSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 21 k~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
.+.+|...+.-||+.. ..+..+.|.+.+..|++.++....+.
T Consensus 18 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~~~ 59 (83)
T 3f27_D 18 AKDERKRLAQQNPDLH------NAELSKMLGKSWKALTLAEKRPFVEE 59 (83)
T ss_dssp HHHHHHHHHHHCSSSC------HHHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4566777788899865 24677888999999998776655443
No 64
>3zxf_A Galectin-7; sugar binding protein; 1.38A {Homo sapiens} SCOP: b.29.1.3 PDB: 1bkz_A 2gal_A* 3gal_A* 4gal_A* 5gal_A* 3zxe_A*
Probab=22.05 E-value=1.1e+02 Score=23.75 Aligned_cols=42 Identities=10% Similarity=0.111 Sum_probs=27.3
Q ss_pred EEEEEeCCCCcCCCEEEECCCCCCCCCC----------CCccEEEEEEeeCC
Q 019662 200 ILTIDVKPGWKKGTKITFPDKGNEQPNQ----------LPADLVFVIDEKPH 241 (337)
Q Consensus 200 ~~~V~Ip~G~~~G~~i~l~g~G~~~~~~----------~~GDL~v~i~v~~~ 241 (337)
-++-.||.|++.|+.|+++|.=...... ...|+.++++..-+
T Consensus 7 P~~~~i~~gl~~G~~i~I~G~v~~~a~rF~Inl~~g~~~~~dialHfnpRf~ 58 (138)
T 3zxf_A 7 PHKSSLPEGIRPGTVLRIRGLVPPNASRFHVNLLCGEEQGSDAALHFNPRLD 58 (138)
T ss_dssp CEEEECTTCCCSSEEEEEEEEECTTCCBEEEEEESSSSTTCCEEEEEEEETT
T ss_pred CEEeecCCCCCCCCEEEEEEEECCCCCEEEEEeeeCCCCCCCEEEEEEEEcC
Confidence 3567899999999999999864332110 13466666666544
No 65
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.94 E-value=1.3e+02 Score=21.45 Aligned_cols=41 Identities=22% Similarity=0.246 Sum_probs=30.0
Q ss_pred HHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 22 KSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+..|...++-||+.. ..+.-+.|.+.|..|++.+|....+.
T Consensus 20 ~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~y~~~ 60 (92)
T 2cs1_A 20 QDHRPQFLIENPKTS------LEDATLQIEELWKTLSEEEKLKYEEK 60 (92)
T ss_dssp HHHHHHHHHHCCSSC------HHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 455666677888864 34778889999999998777665554
No 66
>2xzz_A Protein-glutamine gamma-glutamyltransferase K; 2.30A {Homo sapiens}
Probab=20.77 E-value=2.6e+02 Score=20.62 Aligned_cols=65 Identities=14% Similarity=0.080 Sum_probs=45.6
Q ss_pred CCCceEEEEee--CHHHHhCCcEEEEecCC--CcEEEEEcCCCCCCCcEEEEcCCCcCCCCCCCCCCcEEEEEE
Q 019662 247 DSNDLIVNHKV--SLAEALGGTSVSLITLD--GRDLNIAVTDIISPGFELGIPGEGMPIAREPGNRGDLRIKFE 316 (337)
Q Consensus 247 ~g~dL~~~~~I--sl~eAl~G~~~~i~~l~--g~~~~v~i~~~~~~g~~~rl~g~G~p~~~~~~~~GdL~v~~~ 316 (337)
.+..+..++.. +|.++|.+|.+.|+... .. ..+.++. +.||..+++.-+=.|... ..--|++.|.
T Consensus 18 v~~~l~v~vsf~NPL~~~L~~c~~~vEG~GL~~~-~~~~~~~-v~pg~~~~~~~~~~P~~~---G~~~L~a~f~ 86 (102)
T 2xzz_A 18 VGQECEVQIVFKNPLPVTLTNVVFRLEGSGLQRP-KILNVGD-IGGNETVTLRQSFVPVRP---GPRQLIASLD 86 (102)
T ss_dssp SSSCEEEEEEEECCSSSCBCSEEEEEEETTTEEE-EEEEECC-BCTTCEEEEEEEECCCSC---SSCCCEEEEE
T ss_pred cCCeEEEEEEEECCCCCcccCEEEEEECCCCCcc-eEEEcCc-CCCCCEEEEEEEEecCcc---cceEEEEEEE
Confidence 36666666655 68899999999998743 22 5666654 899999999888777654 2345666654
No 67
>1hme_A High mobility group protein fragment-B; DNA-binding; NMR {Rattus norvegicus} SCOP: a.21.1.1 PDB: 1hmf_A 1nhm_A 1nhn_A 1hsm_A 1hsn_A 1j3c_A 1j3d_A 2yqi_A
Probab=20.54 E-value=2e+02 Score=19.49 Aligned_cols=41 Identities=17% Similarity=0.211 Sum_probs=29.3
Q ss_pred HHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhc
Q 019662 22 KSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQ 68 (337)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~ 68 (337)
+.+|...+.-||+.+ ..+..+.|.+.+..|++.++....+.
T Consensus 19 ~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~~eK~~y~~~ 59 (77)
T 1hme_A 19 SEYRPKIKGEHPGLS------IGDVAKKLGEMWNNTAADDKQPYEKK 59 (77)
T ss_dssp HHHHHHHHHHCTTCC------HHHHHHHHHHHHHHSCGGGSHHHHHH
T ss_pred HHHHHHHHHHCCCCC------HHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 455666667788754 35678889999999998776654443
No 68
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=20.42 E-value=1.3e+02 Score=21.41 Aligned_cols=42 Identities=12% Similarity=0.159 Sum_probs=30.8
Q ss_pred HHHHHHHHHhCCCCCCCChHHHHHHHHHHHHHHhhcCChhhhhhhhcc
Q 019662 22 KSYRKLAMKWHPDKNPNDKKEAEARFKQISEAYEVLSDPQKRAIYDQY 69 (337)
Q Consensus 22 ~ayr~la~~~hPd~~~~~~~~~~~~f~~i~~Ay~~L~d~~~r~~yD~~ 69 (337)
+.+|...+.-||+.+ ..+.-+.|.+.|..|++.++....|+.
T Consensus 33 ~~~r~~~k~~~P~~~------~~eisk~lg~~Wk~ls~eeK~~Y~~~A 74 (90)
T 1wgf_A 33 EEKRRQLQEERPELS------ESELTRLLARMWNDLSEKKKAKYKARE 74 (90)
T ss_dssp HHTHHHHHHHCTTSC------HHHHHHHHHHHHHHSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHCCCCC------HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 455666777888854 346778899999999988777666653
Done!