Query 019665
Match_columns 337
No_of_seqs 134 out of 1177
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 05:15:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019665.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019665hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 6.6E-80 2.2E-84 577.8 26.4 329 2-333 7-353 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 4.6E-74 1.6E-78 530.0 29.4 289 35-325 4-309 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 8.6E-75 2.9E-79 535.2 20.4 294 36-336 2-305 (319)
4 1odm_A Isopenicillin N synthas 100.0 2.9E-69 9.8E-74 501.6 26.7 279 35-326 6-325 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 1.2E-69 4E-74 499.8 19.8 278 36-327 3-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 1.5E-65 5.3E-70 465.4 25.4 260 36-325 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 95.6 0.037 1.3E-06 48.1 8.1 106 164-287 73-194 (243)
8 2hbt_A EGL nine homolog 1; pro 94.9 0.22 7.6E-06 43.3 10.9 185 50-288 14-213 (247)
9 2rg4_A Uncharacterized protein 93.7 1.5 5.1E-05 37.1 13.2 44 236-291 166-210 (216)
10 2iuw_A Alkylated repair protei 87.7 2.3 7.9E-05 36.5 8.6 85 190-287 126-229 (238)
11 3s57_A Alpha-ketoglutarate-dep 87.4 2.1 7.3E-05 35.8 8.1 83 190-285 100-200 (204)
12 2jig_A Prolyl-4 hydroxylase; h 85.8 2 6.8E-05 36.4 7.2 48 238-289 170-218 (224)
13 3itq_A Prolyl 4-hydroxylase, a 85.3 3.1 0.00011 35.2 8.0 105 165-288 94-212 (216)
14 3tht_A Alkylated DNA repair pr 73.7 4.5 0.00016 36.7 5.5 96 189-292 197-317 (345)
15 3i3q_A Alpha-ketoglutarate-dep 65.6 16 0.00055 30.5 6.9 80 190-286 105-201 (211)
16 2opi_A L-fuculose-1-phosphate 60.2 3.3 0.00011 34.8 1.6 36 37-72 125-160 (212)
17 2fk5_A Fuculose-1-phosphate al 56.7 5.4 0.00018 33.1 2.3 51 36-86 116-175 (200)
18 3o2g_A Gamma-butyrobetaine dio 54.1 9.1 0.00031 35.3 3.6 51 37-90 122-173 (388)
19 1pvt_A Sugar-phosphate aldolas 53.1 5.8 0.0002 33.9 2.0 37 36-72 160-196 (238)
20 1e4c_P L-fuculose 1-phosphate 52.0 5.2 0.00018 33.6 1.5 37 36-72 121-157 (215)
21 2dbn_A Hypothetical protein YB 50.7 7.3 0.00025 36.6 2.3 53 36-89 99-151 (461)
22 2v9l_A Rhamnulose-1-phosphate 47.8 6.5 0.00022 34.4 1.5 36 37-72 179-214 (274)
23 1m5a_B Insulin B chain; alpha 47.5 20 0.00069 19.9 2.9 19 48-66 8-26 (30)
24 1otj_A Alpha-ketoglutarate-dep 45.0 15 0.00051 31.9 3.4 50 36-88 16-65 (283)
25 2irp_A Putative aldolase class 43.3 11 0.00037 31.3 2.1 36 36-72 138-176 (208)
26 3r1j_A Alpha-ketoglutarate-dep 39.8 23 0.00079 31.3 3.8 52 36-90 20-72 (301)
27 1oih_A Putative alkylsulfatase 38.8 22 0.00076 31.1 3.6 51 36-89 26-77 (301)
28 3pvj_A Alpha-ketoglutarate-dep 35.1 23 0.00078 30.8 3.0 51 36-89 14-64 (277)
29 3ocr_A Class II aldolase/adduc 34.6 16 0.00055 31.9 1.9 37 36-72 155-192 (273)
30 4ay7_A Methylcobalamin\: coenz 34.2 63 0.0021 28.9 5.9 43 47-89 302-348 (348)
31 3ghf_A Septum site-determining 28.9 35 0.0012 25.6 2.7 36 40-75 51-86 (120)
32 3rcq_A Aspartyl/asparaginyl be 26.7 72 0.0025 26.2 4.5 44 248-291 139-187 (197)
33 1e5r_A Proline oxidase; oxidor 25.1 57 0.002 28.6 3.7 65 208-286 103-175 (290)
34 2nrk_A Hypothetical protein GR 24.8 8.7 0.0003 31.1 -1.5 39 36-74 49-88 (173)
35 3m4r_A Uncharacterized protein 24.6 21 0.00073 30.0 0.8 34 38-72 156-190 (222)
36 3kt7_A PKHD-type hydroxylase T 24.2 2.8E+02 0.0095 27.1 8.6 103 164-287 104-227 (633)
37 3m0z_A Putative aldolase; MCSG 23.0 1.2E+02 0.0039 25.7 4.9 40 45-85 169-209 (249)
38 1y66_A Engrailed homeodomain; 21.7 1E+02 0.0036 18.3 3.2 39 147-185 7-45 (52)
39 2x4k_A 4-oxalocrotonate tautom 20.9 89 0.003 19.4 3.3 23 158-180 18-40 (63)
40 3m6y_A 4-hydroxy-2-oxoglutarat 20.5 1.3E+02 0.0044 25.8 4.7 40 45-85 192-232 (275)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=6.6e-80 Score=577.84 Aligned_cols=329 Identities=35% Similarity=0.604 Sum_probs=292.3
Q ss_pred cHhHhhcCCCCCCCCCCCCCCCCCCCCCCC---CC---CCCCCcEEeCCC--c----chHHHHHHHHHHHHHcCeEEEEe
Q 019665 2 DTKVLSSGIRYTNLPEGYVRPESERPNLSE---VS---ECKNVPVIDLAC--D----DRSLIVQQVADACKNYGFFQAIN 69 (337)
Q Consensus 2 ~~~~~~~~~~~~~~p~~~~~p~~~~~~~~~---~~---~~~~iPvIDls~--~----~~~~~~~~L~~A~~~~Gff~l~n 69 (337)
|+.|+++|+ ++||++|++|+.+++.... .. ....||||||+. . .+.+++++|.+||+++|||||+|
T Consensus 7 v~~l~~~~~--~~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFF~v~n 84 (356)
T 1gp6_A 7 VESLAKSGI--ISIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDWGVMHLIN 84 (356)
T ss_dssp HHHHHHTTC--SSCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHTSEEEEES
T ss_pred HHHHHhcCC--CCCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhCCEEEEeC
Confidence 788999998 8999999999888875332 10 024799999982 1 25668999999999999999999
Q ss_pred CCCChHHHHHHHHHHHHhcCCCHHHHchhcCCCC-CCCCCCCCccccCCcccccceecccccccCCC-CCCCCCCCCCCc
Q 019665 70 HEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDP-SKTMRLSTSFNVNKEKVHNWRDYLRLHCYPLD-KYVPEWPSNPST 147 (337)
Q Consensus 70 hgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~-~~~~Gy~~~~~~~~~~~~d~~E~~~~~~~p~~-~~~~~wP~~~~~ 147 (337)
|||+.++++++++.+++||+||.|+|+++..... ..++||+........+..||+|.|.+...|.. ..+|.||+.++.
T Consensus 85 HGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~wP~~~~~ 164 (356)
T 1gp6_A 85 HGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSIWPKTPSD 164 (356)
T ss_dssp CSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGGSCCSSTT
T ss_pred CCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCccccccccCCCcchh
Confidence 9999999999999999999999999999987654 46789965444444567899999999865542 234899999999
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHhhhc---CCCceeeeeecCCCCCCCCcccccCccCCCceEEEecC
Q 019665 148 FKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLG---EQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQD 224 (337)
Q Consensus 148 fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~---~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~~~ 224 (337)
||+.+++|++.|.+++.+|+++|+++||+++++|.+.+. .+.+.||++|||+++.++..+|+++|||+|+||||+||
T Consensus 165 fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd 244 (356)
T 1gp6_A 165 YIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSALTFILHN 244 (356)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSSEEEEEEC
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCeEEEEEEc
Confidence 999999999999999999999999999999999999887 47789999999999988888999999999999999999
Q ss_pred CCCCceEEeeCCeeEEccCCCCeEEEEechhhHHhhCCccccccccccCCCCCCeEEEEeeeCCCCCc-eeeCCCCccCC
Q 019665 225 LEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDA-MISPPKALTED 303 (337)
Q Consensus 225 ~~~~GLqV~~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~-~i~pl~~~~~~ 303 (337)
.++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|||+.++.++|||++||++|+.|+ +|+|+++++++
T Consensus 245 -~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl~~~~~~ 323 (356)
T 1gp6_A 245 -MVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPLPEMVSV 323 (356)
T ss_dssp -SCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCCGGGCCS
T ss_pred -CCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCChhhcCC
Confidence 8999999999999999999999999999999999999999999999998888999999999999999 99999999999
Q ss_pred CCCCCCCCcCHHHHHHHHHhccCCCccccc
Q 019665 304 GSGAVYRDFTYAEYYSKFWSRNLDQEHCLE 333 (337)
Q Consensus 304 ~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~ 333 (337)
++|++|+++|++||+..++++.++++...+
T Consensus 324 ~~p~~y~~~t~~eyl~~~~~~~~d~~~~~~ 353 (356)
T 1gp6_A 324 ESPAKFPPRTFAQHIEHKLFGKEQEELVSE 353 (356)
T ss_dssp SSCCSSCCEEHHHHHHHHHHHHHHHHC---
T ss_pred CCCccCCCccHHHHHHHHHHhccCcchhhh
Confidence 899999999999999999998887765544
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=4.6e-74 Score=529.96 Aligned_cols=289 Identities=25% Similarity=0.405 Sum_probs=257.4
Q ss_pred CCCCcEEeCC--CcchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhcCCCHHHHchhcCCCCCCCCCCCC-
Q 019665 35 CKNVPVIDLA--CDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLST- 111 (337)
Q Consensus 35 ~~~iPvIDls--~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~- 111 (337)
.++||||||+ ..++++++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... +...+||..
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~-~~~~~Gy~~~ 82 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGV-KGGARGYIPF 82 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSS-GGGTSEEECC
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccC-CCCccccccc
Confidence 4689999998 346788999999999999999999999999999999999999999999999999876 456789932
Q ss_pred cc-ccCCcccccceeccccccc-CCC------CCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHh
Q 019665 112 SF-NVNKEKVHNWRDYLRLHCY-PLD------KYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKK 183 (337)
Q Consensus 112 ~~-~~~~~~~~d~~E~~~~~~~-p~~------~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~ 183 (337)
+. ........||+|.|.++.. +.. ..+|.||+.+++||+.+++|+++|.+++.+|+++|+++||+++++|.+
T Consensus 83 g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~ 162 (312)
T 3oox_A 83 GVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFKP 162 (312)
T ss_dssp CCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTHH
T ss_pred cceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHHH
Confidence 21 1223456899999988642 111 124899998999999999999999999999999999999999999999
Q ss_pred hhcCCCceeeeeecCCCCCCCCcccccCccCCCceEEEecCCCCCceEEe-eCCeeEEccCCCCeEEEEechhhHHhhCC
Q 019665 184 VLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVL-KDDKWVAVNPLPNAFVINIGDQLQALSNG 262 (337)
Q Consensus 184 ~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~~~~~~~GLqV~-~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G 262 (337)
.+..+.+.||++||||++.++..+|+++|||+|+||||+|| +++||||+ ++|+|++|+|.||++|||+||+||+||||
T Consensus 163 ~~~~~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~TnG 241 (312)
T 3oox_A 163 TVQDGNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGA-EEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLTNN 241 (312)
T ss_dssp HHTTCCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECC-TTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHTTT
T ss_pred HhcCCcceeeeEecCCCCCCcCCcCccceecCceEEEEeEc-CcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHhCC
Confidence 99888899999999999876555999999999999999999 89999997 78999999999999999999999999999
Q ss_pred ccccccccccCCC----CCCeEEEEeeeCCCCCceeeCCCCccCCCCCCCCC-CcCHHHHHHHHHhcc
Q 019665 263 RYKSVWHRAIVNA----EKARMSVASFLCPNNDAMISPPKALTEDGSGAVYR-DFTYAEYYSKFWSRN 325 (337)
Q Consensus 263 ~~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~-~~~~~e~~~~~~~~~ 325 (337)
+|||+.|||+.+. ..+|||++||++|+.|++|+|+++++++++|++|+ ++|++||+..++++.
T Consensus 242 ~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 242 VLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp SSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred eecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 9999999998763 46799999999999999999999999999999999 999999999999854
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=8.6e-75 Score=535.17 Aligned_cols=294 Identities=34% Similarity=0.652 Sum_probs=259.8
Q ss_pred CCCcEEeCC---CcchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhcCCCHHHHchhcCCCCCCCCCCCCc
Q 019665 36 KNVPVIDLA---CDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTS 112 (337)
Q Consensus 36 ~~iPvIDls---~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~ 112 (337)
..||||||+ ...+.+++++|.+||+++|||||+||||+.++++++++.+++||+||.|+|+++... .+||+..
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~----~~Gy~~~ 77 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA----SKALEGV 77 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH----HHHHTTC
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC----CCCCCcc
Confidence 479999998 345788999999999999999999999999999999999999999999999998643 2477322
Q ss_pred cccCCcccccceecccccccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHhhhcC---CC
Q 019665 113 FNVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGE---QG 189 (337)
Q Consensus 113 ~~~~~~~~~d~~E~~~~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~---~~ 189 (337)
....+..||+|.|.+...|.. .+|.||+.++.||+.+++|++.|.+++.+|+++|+++||+++++|.+.+.+ +.
T Consensus 78 --~~e~~~~d~ke~~~~~~~p~~-~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~ 154 (319)
T 1w9y_A 78 --QAEVTDMDWESTFFLKHLPIS-NISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKGPN 154 (319)
T ss_dssp --CCCGGGCCCCEEEEEEEESCC-GGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTCCE
T ss_pred --cccCCCCChhhheeeecCCcc-cccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCCcc
Confidence 122356799999998865542 248999989999999999999999999999999999999999999998863 55
Q ss_pred ceeeeeecCCCCCCCCcccccCccCCCceEEEecCCCCCceEEeeCCeeEEccCCCCeEEEEechhhHHhhCCccccccc
Q 019665 190 QHMAVNFYPPCPEPELTYGLPGHTDPNALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWH 269 (337)
Q Consensus 190 ~~lrl~~Yp~~~~~~~~~~~~~HtD~g~lTlL~~~~~~~GLqV~~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~H 269 (337)
+.||++||||++.++...|+++|||+|+||+|+||..++||||+++|+|++|+|.||++|||+||+||+||||+|||+.|
T Consensus 155 ~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~~H 234 (319)
T 1w9y_A 155 FGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSVMH 234 (319)
T ss_dssp EEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCE
T ss_pred ceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecccc
Confidence 78999999999988888999999999999999994269999999999999999999999999999999999999999999
Q ss_pred cccCCCCCCeEEEEeeeCCCCCceeeCCCCccCCC---CCCCCCCcCHHHHHHHHHhccCCCccc-ccccc
Q 019665 270 RAIVNAEKARMSVASFLCPNNDAMISPPKALTEDG---SGAVYRDFTYAEYYSKFWSRNLDQEHC-LELFK 336 (337)
Q Consensus 270 RV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~---~~~~~~~~~~~e~~~~~~~~~~~~~~~-~~~~~ 336 (337)
||+.++.++|||++||++|+.|++|+|++++++++ +|++|+++|++||+..++++.+.++.. ++.+|
T Consensus 235 RVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~~~~~ 305 (319)
T 1w9y_A 235 RVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKEPRFEAMK 305 (319)
T ss_dssp EECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHHHHHHHHH
T ss_pred eecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcchhHHHHHH
Confidence 99998888999999999999999999999999987 599999999999999999988877765 56655
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=2.9e-69 Score=501.59 Aligned_cols=279 Identities=24% Similarity=0.368 Sum_probs=247.7
Q ss_pred CCCCcEEeCCC------cchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHh-cCCCHHHHchhcCCCCCCCC
Q 019665 35 CKNVPVIDLAC------DDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEF-FNLPVEEKLKLYSDDPSKTM 107 (337)
Q Consensus 35 ~~~iPvIDls~------~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~~ 107 (337)
...||||||+. ..+.+++++|.+||+++|||||+|||| +++++++.+++| |+||.|+|+++.. +
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------~ 76 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------R 76 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC------T
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh------c
Confidence 46899999982 245678999999999999999999999 999999999999 9999999999965 5
Q ss_pred CCCC-ccc-cCC------cccccceecccccccCC-----------CCCCCCCCCC--CCchHHHHHHHHHHHHHHHHHH
Q 019665 108 RLST-SFN-VNK------EKVHNWRDYLRLHCYPL-----------DKYVPEWPSN--PSTFKEFVSTYCSEVRGLGYRV 166 (337)
Q Consensus 108 Gy~~-~~~-~~~------~~~~d~~E~~~~~~~p~-----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~la~~l 166 (337)
||.. +.. ... .+..||+|.|.++.... ...+|.||+. +++||+.+++|++.|.+++.+|
T Consensus 77 Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~l 156 (331)
T 1odm_A 77 AYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSAL 156 (331)
T ss_dssp TTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHH
Confidence 6631 111 111 25689999999875321 1125999987 8999999999999999999999
Q ss_pred HHHHHHhcCCChHHHHhhhcCCCceee--eeecC------C---CCCCCC-cccccCccCCCceEEEecCCCCCceEEe-
Q 019665 167 LELISESLGLEKDYIKKVLGEQGQHMA--VNFYP------P---CPEPEL-TYGLPGHTDPNALTILLQDLEVAGLQVL- 233 (337)
Q Consensus 167 l~~l~~~Lgl~~~~~~~~~~~~~~~lr--l~~Yp------~---~~~~~~-~~~~~~HtD~g~lTlL~~~~~~~GLqV~- 233 (337)
+++|+++||+++++|.+.+.++.+.|| ++||| | ++.++. .+|+++|||+|+||||+|| .++||||+
T Consensus 157 l~~la~~Lgl~~~~f~~~~~~~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~v~GLQV~~ 235 (331)
T 1odm_A 157 LKGYALALGKEENFFARHFKPDDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQS-NVQNLQVET 235 (331)
T ss_dssp HHHHHHHTTSCTTTTGGGCCTTTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEEC-SSCCEEEEE
T ss_pred HHHHHHHhCCCHHHHHHHhcCcHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeC-CCCCEEEEc
Confidence 999999999999999999988889999 99999 7 666665 8999999999999999999 89999999
Q ss_pred eCCeeEEccCCCCeEEEEechhhHHhhCCccccccccccCCCCCCeEEEEeeeCCCCCceeeCCCCccCCCCCCCCCCcC
Q 019665 234 KDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFT 313 (337)
Q Consensus 234 ~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~~~~ 313 (337)
++| |++|+|.||++|||+||+||+||||+|||+.|||+.+ ..+|||++||++|+.|++|+|+++++++++ ++|++++
T Consensus 236 ~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~~t 312 (331)
T 1odm_A 236 AAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREPLS 312 (331)
T ss_dssp TTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCCCB
T ss_pred CCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCCcc
Confidence 788 9999999999999999999999999999999999864 678999999999999999999999999887 9999999
Q ss_pred HHHHHHHHHhccC
Q 019665 314 YAEYYSKFWSRNL 326 (337)
Q Consensus 314 ~~e~~~~~~~~~~ 326 (337)
++||+..++++++
T Consensus 313 ~~e~l~~~~~~~~ 325 (331)
T 1odm_A 313 YGDYLQNGLVSLI 325 (331)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999999998775
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=1.2e-69 Score=499.82 Aligned_cols=278 Identities=16% Similarity=0.212 Sum_probs=236.2
Q ss_pred CCCcEEeCCC--cchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhcCCC-HHHHchhcCCCCCCCCCCCCc
Q 019665 36 KNVPVIDLAC--DDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLP-VEEKLKLYSDDPSKTMRLSTS 112 (337)
Q Consensus 36 ~~iPvIDls~--~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~Gy~~~ 112 (337)
..||||||+. .++. .++|.+||+++|||||+||||+.++++++++.+++||+|| .|+|+++........+||+..
T Consensus 3 ~~iPvIDls~l~~~~~--~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~~~~~Gy~~~ 80 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLH--QDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVPTMRRGFTGL 80 (311)
T ss_dssp CCCCEEEHHHHHTTCS--HHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSCCSSSEEEEC
T ss_pred CCCcEEEchhhcCCCH--HHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCCCCCCceeec
Confidence 5799999981 1222 2399999999999999999999999999999999999999 999999987765667999432
Q ss_pred ccc------CCcccccceecccccccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCC----ChHHHH
Q 019665 113 FNV------NKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGL----EKDYIK 182 (337)
Q Consensus 113 ~~~------~~~~~~d~~E~~~~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl----~~~~~~ 182 (337)
... ...+..||+|.|.++.. +|.|| ++.||+.+++|++.|.+++.+|+++|+++||+ ++++|.
T Consensus 81 ~~e~~~~~~~~~~~~d~~E~~~~~~~-----~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~ 153 (311)
T 1dcs_A 81 ESESTAQITNTGSYSDYSMCYSMGTA-----DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFL 153 (311)
T ss_dssp -----------------CEEEEECSS-----SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHH
T ss_pred cccccccccCCCCCCCcceeeeccCC-----CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHh
Confidence 211 22457899999999754 38899 89999999999999999999999999999999 888887
Q ss_pred hhhcCCCceeeeeecCCCCCCC--C--cccccCccCCCceEEEecCCCCCc---eEEeeCCeeEEccCCCCeEEEEechh
Q 019665 183 KVLGEQGQHMAVNFYPPCPEPE--L--TYGLPGHTDPNALTILLQDLEVAG---LQVLKDDKWVAVNPLPNAFVINIGDQ 255 (337)
Q Consensus 183 ~~~~~~~~~lrl~~Yp~~~~~~--~--~~~~~~HtD~g~lTlL~~~~~~~G---LqV~~~~~W~~v~~~pg~~vVn~Gd~ 255 (337)
+. .+.||++||||++.++ . .+|+++|||+|+||||+||..++| |||+.+|+|++|+|.||++|||+||+
T Consensus 154 ~~----~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiGD~ 229 (311)
T 1dcs_A 154 DC----EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCGAI 229 (311)
T ss_dssp SC----CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEECHH
T ss_pred hc----chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHHHH
Confidence 65 6789999999998753 3 678999999999999999635899 99999999999999999999999999
Q ss_pred hHHhhCCccccccccccCCC-----CCCeEEEEeeeCCCCCceeeCCCCccCCCCCCCC--CCcCHHHHHHHHHhccCC
Q 019665 256 LQALSNGRYKSVWHRAIVNA-----EKARMSVASFLCPNNDAMISPPKALTEDGSGAVY--RDFTYAEYYSKFWSRNLD 327 (337)
Q Consensus 256 l~~~T~G~~~s~~HRV~~~~-----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~--~~~~~~e~~~~~~~~~~~ 327 (337)
||+||||+|||+.|||+.++ .++|||++||++|+.|++|+ +++++++++|++| +++|++||+..++++.+.
T Consensus 230 l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~~ 307 (311)
T 1dcs_A 230 ATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIRR 307 (311)
T ss_dssp HHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEEC
T ss_pred HHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHhc
Confidence 99999999999999999876 67899999999999999999 9999998889999 999999999998877664
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=1.5e-65 Score=465.40 Aligned_cols=260 Identities=25% Similarity=0.377 Sum_probs=223.6
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhcCCCHHHHchhcCCCCCCCCCCCCcc--
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSF-- 113 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~-- 113 (337)
++||||||+.. +++++|.+||+++|||||+||||+.++++++++.+++||++ |+|+++... +...+||+...
T Consensus 2 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~-~~~~~GY~~~~~~ 75 (280)
T 3on7_A 2 MKLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFN-RETHDGFFPASIS 75 (280)
T ss_dssp --CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCC-TTTCCEEECCC--
T ss_pred CCCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccC-CCCCCccccCccc
Confidence 47999999853 46899999999999999999999999999999999999998 789998765 35679994321
Q ss_pred -ccCCcccccceecccccccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCCh--HH---HHhhhcC
Q 019665 114 -NVNKEKVHNWRDYLRLHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEK--DY---IKKVLGE 187 (337)
Q Consensus 114 -~~~~~~~~d~~E~~~~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~--~~---~~~~~~~ 187 (337)
........||+|.|.+. .||..+++||+.+++|+++|.+++.+||++|+++||++. ++ |.+.+.+
T Consensus 76 e~~~~~~~~D~kE~~~~~---------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~~~ 146 (280)
T 3on7_A 76 ETAKGHTVKDIKEYYHVY---------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMIAN 146 (280)
T ss_dssp ------CCCCSCEEEEEC---------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHHTT
T ss_pred cccCCCCcccHHHHHhcC---------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHhcC
Confidence 22233467999999873 377778999999999999999999999999999999763 22 5566655
Q ss_pred CC-ceeeeeecCCCCCCC--CcccccCccCCCceEEEecCCCCCceEEe-eCCeeEEccCCCCeEEEEechhhHHhhCCc
Q 019665 188 QG-QHMAVNFYPPCPEPE--LTYGLPGHTDPNALTILLQDLEVAGLQVL-KDDKWVAVNPLPNAFVINIGDQLQALSNGR 263 (337)
Q Consensus 188 ~~-~~lrl~~Yp~~~~~~--~~~~~~~HtD~g~lTlL~~~~~~~GLqV~-~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~ 263 (337)
+. +.||++||||++.++ ..+|+++|||+|+||+|+|| +++||||+ ++|+|++|+|.||++|||+||+||+||||+
T Consensus 147 ~~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tng~ 225 (280)
T 3on7_A 147 SHKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTA-NEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASDGY 225 (280)
T ss_dssp CSSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECC-SCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTTTS
T ss_pred CccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEec-CCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhCCc
Confidence 54 899999999998754 47899999999999999999 89999999 689999999999999999999999999999
Q ss_pred cccccccccCCC----CCCeEEEEeeeCCCCCceeeCCCCccCCCCCCCCCCcCHHHHHHHHHhcc
Q 019665 264 YKSVWHRAIVNA----EKARMSVASFLCPNNDAMISPPKALTEDGSGAVYRDFTYAEYYSKFWSRN 325 (337)
Q Consensus 264 ~~s~~HRV~~~~----~~~R~Si~~F~~p~~d~~i~pl~~~~~~~~~~~~~~~~~~e~~~~~~~~~ 325 (337)
|||+.|||+.++ ..+|||++||++|+.|++|+| ++|++||+.+|+++.
T Consensus 226 ~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 226 FPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp SCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred ccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 999999998863 458999999999999999985 589999999999864
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.62 E-value=0.037 Score=48.07 Aligned_cols=106 Identities=15% Similarity=0.054 Sum_probs=63.6
Q ss_pred HHHHHHHHHhcCCChHHHHhhhcCCCceeeeeecCCCCCCCCcccccCccCCC-----------ceEEEec-CC---CC-
Q 019665 164 YRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPN-----------ALTILLQ-DL---EV- 227 (337)
Q Consensus 164 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g-----------~lTlL~~-~~---~~- 227 (337)
..|.+.+...++....++...+......+++++|.+.. -..+|.|.. .+|+++. +. ..
T Consensus 73 ~~l~~~i~~~l~~~~~f~~~~L~~~~e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~G 146 (243)
T 3dkq_A 73 VALGQQIMDRLLAHPQFVSAALPLQFYPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQG 146 (243)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHCEEEEEEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEE
T ss_pred HHHHHHHHHHHccCcchhhcccccccccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCC
Confidence 34444444555554433332232233458889998742 245666653 3555544 20 12
Q ss_pred CceEEeeCCeeEEccCCCCeEEEEechhhHHhhCCccccccccccCCCCCCeEEEEeeeC
Q 019665 228 AGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLC 287 (337)
Q Consensus 228 ~GLqV~~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~Si~~F~~ 287 (337)
|.|.+.....=..|+|..|.+|+.-. .++|+|..-....|++++++++
T Consensus 147 Getvf~~~~~~~~V~P~~G~~v~F~s------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 147 GELVIQDTYGQQSIKLSAGSLVLYPS------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp CCEEEEETTEEEEECCCTTCEEEEET------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ceEEEeeCCCcEEEecCCCEEEEECC------------CCeEcCccccccCEEEEEEehh
Confidence 33555554445789999999998743 3689997654558999999887
No 8
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=94.90 E-value=0.22 Score=43.26 Aligned_cols=185 Identities=15% Similarity=0.190 Sum_probs=97.8
Q ss_pred HHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhcCCCHHHHchhcCCCCCCCCCCCCccccCCcccccce-eccc
Q 019665 50 LIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNLPVEEKLKLYSDDPSKTMRLSTSFNVNKEKVHNWR-DYLR 128 (337)
Q Consensus 50 ~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~Gy~~~~~~~~~~~~d~~-E~~~ 128 (337)
...+.+..++.+.|++.+.|- +++++++.+.+.++.+... -.+... ..| .. ......+.+ +.+
T Consensus 14 ~~~~~i~~~L~~~g~~Vid~f-Ls~ee~~~L~~~~~~~~~~-----g~~~~a----~i~--~~---~~~~~~~iR~d~i- 77 (247)
T 2hbt_A 14 LALEYIVPCMNKHGICVVDDF-LGKETGQQIGDEVRALHDT-----GKFTDG----QLV--SQ---KSDSSKDIRGDKI- 77 (247)
T ss_dssp HHHHTHHHHHHHTSEEEESSS-SCHHHHHHHHHHHHHHHHT-----TCSCSC----CEE--EC---CSSSTTCEECCEE-
T ss_pred hhHHHHHHHhccCCEEEECCC-CCHHHHHHHHHHHHhhhhc-----CCcccc----ccc--cc---cccccccccccce-
Confidence 445688999999999876665 8999999999988874310 001000 000 00 000000111 000
Q ss_pred ccccCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHhhhcCCCceeeeeecCCCCCCCCccc
Q 019665 129 LHCYPLDKYVPEWPSNPSTFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYG 208 (337)
Q Consensus 129 ~~~~p~~~~~~~wP~~~~~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~ 208 (337)
.|-+......+.+..|.+.+.++.. .+...+|+.. .. ...-+.+.+|++. ...
T Consensus 78 -----------~wl~~~~~~~~~~~~l~~~i~~l~~----~ln~~lGl~~------i~-~~~e~~~~~Y~~~-----G~~ 130 (247)
T 2hbt_A 78 -----------TWIEGKEPGCETIGLLMSSMDDLIR----HCNGKLGSYK------IN-GRTKAMVACYPGN-----GTG 130 (247)
T ss_dssp -----------EEECSCSTTCHHHHHHHHHHHHHHH----HTTTTSTTCC------EE-EECCEEEEEECSS-----SCC
T ss_pred -----------eeecccccchhHHHHHHHHHHHHHH----HHhhhcCccc------cc-ccceEEEEEecCC-----CCc
Confidence 0111000011223334444443332 2222233320 00 0133667888752 123
Q ss_pred ccCccCCC-----ceEEEec-CC-C-----CCceEEeeCC--eeEEccCCCCeEEEEechhhHHhhCCccccccccccCC
Q 019665 209 LPGHTDPN-----ALTILLQ-DL-E-----VAGLQVLKDD--KWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVN 274 (337)
Q Consensus 209 ~~~HtD~g-----~lTlL~~-~~-~-----~~GLqV~~~~--~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~ 274 (337)
..+|.|.. .+|+++. +. . .|.|+++.++ ....|.|..|.+|++-.+. -.+|.|..
T Consensus 131 y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~----------~~~H~V~p- 199 (247)
T 2hbt_A 131 YVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR----------RNPHEVQP- 199 (247)
T ss_dssp EEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST----------TCCEEECC-
T ss_pred ccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC----------Cceeeecc-
Confidence 56677762 5777765 20 1 3446777544 6789999999999887531 15899976
Q ss_pred CCCCeEEEEeeeCC
Q 019665 275 AEKARMSVASFLCP 288 (337)
Q Consensus 275 ~~~~R~Si~~F~~p 288 (337)
....|+||+.+++-
T Consensus 200 ~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 200 AYATRYAITVWYFD 213 (247)
T ss_dssp BSSCEEEEEEEEEE
T ss_pred CCCEEEEEEEEEcC
Confidence 45689999887664
No 9
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=93.66 E-value=1.5 Score=37.08 Aligned_cols=44 Identities=18% Similarity=0.163 Sum_probs=33.4
Q ss_pred CeeEEccCCCCeEEEEechhhHHhhCCccccccccccCCC-CCCeEEEEeeeCCCCC
Q 019665 236 DKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNA-EKARMSVASFLCPNND 291 (337)
Q Consensus 236 ~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~~-~~~R~Si~~F~~p~~d 291 (337)
..+..|.|.+|.+||+-+. ..|.|.... +++|+||+|-+.+...
T Consensus 166 ~~~~~i~P~~G~lvlFpS~------------l~H~V~p~~~~~~RiSIsFN~~~~~~ 210 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESW------------LRHEVPMNMAEEDRISVSFNYAWGEG 210 (216)
T ss_dssp CSEEEECCCTTEEEEEETT------------SCEEECCCCSSSCEEEEEEEEEC---
T ss_pred CCeeEecCCCCeEEEECCC------------CEEeccCCCCCCCEEEEEEEeecCCc
Confidence 4567899999999988655 379998754 4689999999987653
No 10
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=87.68 E-value=2.3 Score=36.51 Aligned_cols=85 Identities=12% Similarity=0.099 Sum_probs=55.8
Q ss_pred ceeeeeecCCCCCCCCcccccCccCC--------CceEEEecCCCCCceEEee-C----------CeeEEccCCCCeEEE
Q 019665 190 QHMAVNFYPPCPEPELTYGLPGHTDP--------NALTILLQDLEVAGLQVLK-D----------DKWVAVNPLPNAFVI 250 (337)
Q Consensus 190 ~~lrl~~Yp~~~~~~~~~~~~~HtD~--------g~lTlL~~~~~~~GLqV~~-~----------~~W~~v~~~pg~~vV 250 (337)
..+-+++|++.. -++++|.|- .+.|+-+. ...=+.+.. . +..+.+...+|+++|
T Consensus 126 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG--~~~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllv 198 (238)
T 2iuw_A 126 NSLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFG--ATRTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLI 198 (238)
T ss_dssp CEEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEE--SCEEEEEEECCC--------CCCEEEEEECTTCEEE
T ss_pred CEEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECC--CCEEEEEeccCCccccCcccCCceEEEEcCCCCEEE
Confidence 456789998753 258888884 23444443 222344432 1 468999999999999
Q ss_pred EechhhHHhhCCccccccccccCCCCCCeEEEEeeeC
Q 019665 251 NIGDQLQALSNGRYKSVWHRAIVNAEKARMSVASFLC 287 (337)
Q Consensus 251 n~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~Si~~F~~ 287 (337)
.-|++=..|..|.-+.. .....|+|+.|=.-
T Consensus 199 M~G~~r~~w~H~I~~~~------~~~~~RIsLTfR~v 229 (238)
T 2iuw_A 199 MEGATQADWQHRVPKEY------HSREPRVNLTFRTV 229 (238)
T ss_dssp EEETHHHHEEEEECCCS------SCCCCEEEEEEECC
T ss_pred EChhhhCccEecCCCcC------CCCCCEEEEEeeec
Confidence 99998777765544321 12457999998654
No 11
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=87.43 E-value=2.1 Score=35.79 Aligned_cols=83 Identities=7% Similarity=-0.033 Sum_probs=52.6
Q ss_pred ceeeeeecCCCCCCCCcccccCccCCC--------ceEEEecCCCCCceEEee----------CCeeEEccCCCCeEEEE
Q 019665 190 QHMAVNFYPPCPEPELTYGLPGHTDPN--------ALTILLQDLEVAGLQVLK----------DDKWVAVNPLPNAFVIN 251 (337)
Q Consensus 190 ~~lrl~~Yp~~~~~~~~~~~~~HtD~g--------~lTlL~~~~~~~GLqV~~----------~~~W~~v~~~pg~~vVn 251 (337)
..+-+|+|.+.. -++++|.|-- +.++-+. ...-+.+.. .+..+.+...+|+++|.
T Consensus 100 n~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG--~~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM 172 (204)
T 3s57_A 100 NFVLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFG--ASRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMM 172 (204)
T ss_dssp SEEEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEE--SCEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEE
T ss_pred ceeEEEEECCCC-----CcccceecChhhccCCCcEEEEECC--CceEEEEEEcCCCccccccCCceEEEECCCCCEEEE
Confidence 345689998743 2588888862 2344443 233344442 12578899999999999
Q ss_pred echhhHHhhCCccccccccccCCCCCCeEEEEee
Q 019665 252 IGDQLQALSNGRYKSVWHRAIVNAEKARMSVASF 285 (337)
Q Consensus 252 ~Gd~l~~~T~G~~~s~~HRV~~~~~~~R~Si~~F 285 (337)
-|++=..|..|.-+... ....|+|+.|-
T Consensus 173 ~g~~q~~w~H~Ip~~~~------~~~~RislTFR 200 (204)
T 3s57_A 173 NHPTNTHWYHSLPVRKK------VLAPRVNLTFR 200 (204)
T ss_dssp ETTHHHHEEEEECCCTT------CCSCEEEEEEE
T ss_pred CchhhheeEeeccccCC------CCCCEEEEEee
Confidence 99987778644332111 23579999984
No 12
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=85.84 E-value=2 Score=36.38 Aligned_cols=48 Identities=13% Similarity=0.163 Sum_probs=34.1
Q ss_pred eEEccCCCCeEEEEechhhHHhhCCcc-ccccccccCCCCCCeEEEEeeeCCC
Q 019665 238 WVAVNPLPNAFVINIGDQLQALSNGRY-KSVWHRAIVNAEKARMSVASFLCPN 289 (337)
Q Consensus 238 W~~v~~~pg~~vVn~Gd~l~~~T~G~~-~s~~HRV~~~~~~~R~Si~~F~~p~ 289 (337)
-+.|.|..|.+|+.--- ..+|.. ..++|+|..-....|+++..+++-.
T Consensus 170 ~~~V~P~~G~al~f~~~----~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~~ 218 (224)
T 2jig_A 170 GLAVKPIKGDALMFYSL----KPDGSNDPASLHGSCPTLKGDKWSATKWIHVA 218 (224)
T ss_dssp SEEECCCTTCEEEEESB----CTTSCBCGGGCEEECCEEESEEEEEEEEEESS
T ss_pred ceEEecccCcEEEEEee----CCCCCCCCCCcccCCccccceEEEEEEeEEcC
Confidence 47899999998887531 123333 5789999765445799999988754
No 13
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=85.31 E-value=3.1 Score=35.15 Aligned_cols=105 Identities=13% Similarity=0.116 Sum_probs=60.9
Q ss_pred HHHHHHHHhcCCChHHHHhhhcCCCceeeeeecCCCCCCCCcccccCccCCC-----------ceEEEec--CCCCCceE
Q 019665 165 RVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDPN-----------ALTILLQ--DLEVAGLQ 231 (337)
Q Consensus 165 ~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~g-----------~lTlL~~--~~~~~GLq 231 (337)
.|.+-++..+|++.+ ....+++++|.+... ..+|.|+. .+|+++. |...||=-
T Consensus 94 ~i~~Ri~~~~gl~~~--------~~E~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT 159 (216)
T 3itq_A 94 KIEKRISSIMNVPAS--------HGEGLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGET 159 (216)
T ss_dssp HHHHHHHHHHTSCGG--------GBCCCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCE
T ss_pred HHHHHHHHhcCceec--------cccceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCcee
Confidence 344444445677531 123578888876432 45666653 3677665 21234433
Q ss_pred EeeCCeeEEccCCCCeEEEEechhhHHhhCCc-cccccccccCCCCCCeEEEEeeeCC
Q 019665 232 VLKDDKWVAVNPLPNAFVINIGDQLQALSNGR-YKSVWHRAIVNAEKARMSVASFLCP 288 (337)
Q Consensus 232 V~~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~-~~s~~HRV~~~~~~~R~Si~~F~~p 288 (337)
+.... =+.|.|..|.+|+.-.-. .+|. =..++|+|..-....|+++..+++-
T Consensus 160 ~Fp~~-~~~V~P~~G~al~f~~~~----~~g~~d~~~lH~~~PV~~G~K~v~~~W~~~ 212 (216)
T 3itq_A 160 FFPKL-NLSVHPRKGMAVYFEYFY----QDQSLNELTLHGGAPVTKGEKWIATQWVRR 212 (216)
T ss_dssp EETTT-TEEECCCTTCEEEEECCC----SSHHHHHTTCEEECCEEESCEEEEEEEEES
T ss_pred EecCC-CCEEecCCCeEEEEeccC----CCCCCCCccccccceeccccEEEEEeeEec
Confidence 33221 278899999988765311 1222 1467999976544579999888763
No 14
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=73.74 E-value=4.5 Score=36.74 Aligned_cols=96 Identities=17% Similarity=0.212 Sum_probs=63.9
Q ss_pred CceeeeeecCCCCCCCCcccccCccCCC------ceEEEecCCCCCceEEe-eCCeeEEccCCCCeEEEEechhhHHhhC
Q 019665 189 GQHMAVNFYPPCPEPELTYGLPGHTDPN------ALTILLQDLEVAGLQVL-KDDKWVAVNPLPNAFVINIGDQLQALSN 261 (337)
Q Consensus 189 ~~~lrl~~Yp~~~~~~~~~~~~~HtD~g------~lTlL~~~~~~~GLqV~-~~~~W~~v~~~pg~~vVn~Gd~l~~~T~ 261 (337)
...+-+++|.+.. ++++|.|-. +.|+-+. ...=+.+. .++.++.+...+|+++|.-|++=..|..
T Consensus 197 ~n~~lvN~Y~~G~------~I~~H~D~~~~~~~~I~slSLG--~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H 268 (345)
T 3tht_A 197 PDQMTINQYEPGQ------GIPAHIDTHSAFEDEIVSLSLG--SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTH 268 (345)
T ss_dssp CSEEEEEEECTTC------CEEEECCCTTTBCSCEEEEEES--SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEE
T ss_pred CCEEEEEEecCCC------CEeeccCCchhcCCeEEEEECC--CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEc
Confidence 3456678897632 688999883 3444443 23334444 3577999999999999999999888977
Q ss_pred CccccccccccC------------------CCCCCeEEEEeeeCCCCCc
Q 019665 262 GRYKSVWHRAIV------------------NAEKARMSVASFLCPNNDA 292 (337)
Q Consensus 262 G~~~s~~HRV~~------------------~~~~~R~Si~~F~~p~~d~ 292 (337)
|.-+-...-+-. .....|+|+.|=.-++..+
T Consensus 269 ~I~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~~c 317 (345)
T 3tht_A 269 GITCRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQTPC 317 (345)
T ss_dssp EECCCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSSCC
T ss_pred cCCcccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCCCc
Confidence 665543332210 0123699999988776543
No 15
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=65.58 E-value=16 Score=30.53 Aligned_cols=80 Identities=18% Similarity=0.112 Sum_probs=52.0
Q ss_pred ceeeeeecCCCCCCCCcccccCccCC-----C--ceEEEecCCCCCceEEee---CCeeEEccCCCCeEEEEechhhHHh
Q 019665 190 QHMAVNFYPPCPEPELTYGLPGHTDP-----N--ALTILLQDLEVAGLQVLK---DDKWVAVNPLPNAFVINIGDQLQAL 259 (337)
Q Consensus 190 ~~lrl~~Yp~~~~~~~~~~~~~HtD~-----g--~lTlL~~~~~~~GLqV~~---~~~W~~v~~~pg~~vVn~Gd~l~~~ 259 (337)
..+-+++|.+.. ++++|.|- + ++++-+. ...-+.+.. .+....+...+|+++|.-|++- .|
T Consensus 105 n~~LvN~Y~~G~------~i~~H~D~~e~~~~~pI~svSLG--~~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~ 175 (211)
T 3i3q_A 105 DACLINRYAPGA------KLSLHQDKDEPDLRAPIVSVSLG--LPAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF 175 (211)
T ss_dssp CEEEEEEECTTC------CEEEECCCCCSCTTSCEEEEEEE--SCEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC
T ss_pred CEEEEEEEcCCC------CcccccCCCccccCCCEEEEECC--CCeEEEEecccCCCceEEEECCCCCEEEECchHH-ce
Confidence 346678898732 68899983 2 3344443 233444442 3678899999999999988862 23
Q ss_pred hCCccccccccccCCC-------CCCeEEEEeee
Q 019665 260 SNGRYKSVWHRAIVNA-------EKARMSVASFL 286 (337)
Q Consensus 260 T~G~~~s~~HRV~~~~-------~~~R~Si~~F~ 286 (337)
.|.|.... ...|+|+.|-.
T Consensus 176 --------~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 --------YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp --------CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred --------EeccCcccCCcCCCCCCCEEEEEeee
Confidence 47765432 23699999864
No 16
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=60.18 E-value=3.3 Score=34.76 Aligned_cols=36 Identities=19% Similarity=0.195 Sum_probs=31.7
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCC
Q 019665 37 NVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEV 72 (337)
Q Consensus 37 ~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi 72 (337)
.||++++...+..++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 799999986567788999999999888899999996
No 17
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=56.66 E-value=5.4 Score=33.13 Aligned_cols=51 Identities=18% Similarity=0.116 Sum_probs=38.5
Q ss_pred CCCcEE-eCCCcchHHHHHHHHHHHHHcCeEEEEeCCCC--h------HHHHHHHHHHHH
Q 019665 36 KNVPVI-DLACDDRSLIVQQVADACKNYGFFQAINHEVP--L------ETVERVLEVAKE 86 (337)
Q Consensus 36 ~~iPvI-Dls~~~~~~~~~~L~~A~~~~Gff~l~nhgi~--~------~~~~~~~~~~~~ 86 (337)
..||++ ++...+..++++.+.+++.+.-.+.|.|||+- - +-+++++..+..
T Consensus 116 ~~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~ 175 (200)
T 2fk5_A 116 KEVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTT 175 (200)
T ss_dssp SCEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHH
T ss_pred CCceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHH
Confidence 379999 88866677899999999999889999999952 1 345555554443
No 18
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=54.09 E-value=9.1 Score=35.26 Aligned_cols=51 Identities=14% Similarity=0.075 Sum_probs=39.2
Q ss_pred CCcEEeCCC-cchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhcCC
Q 019665 37 NVPVIDLAC-DDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFNL 90 (337)
Q Consensus 37 ~iPvIDls~-~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~l 90 (337)
++|.||++. ..+++.+.++.+|+.++|++.+.+-.++.+ +..+.++.|=.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~---~~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPG---EVSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTT---HHHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHH---HHHHHHHHhCCC
Confidence 689999972 234678899999999999999999988764 444566666544
No 19
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=53.07 E-value=5.8 Score=33.87 Aligned_cols=37 Identities=8% Similarity=0.083 Sum_probs=32.3
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCC
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEV 72 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi 72 (337)
..||++++...+..++++++.+++.+.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 4799999986667789999999999888999999996
No 20
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=51.99 E-value=5.2 Score=33.56 Aligned_cols=37 Identities=22% Similarity=0.143 Sum_probs=31.7
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCC
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEV 72 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi 72 (337)
..||++++...+..++++.+.+++.+.-.+.|.|||+
T Consensus 121 ~~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 121 NSIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp SCBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CCcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3799999986666788999999998888899999996
No 21
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=50.69 E-value=7.3 Score=36.60 Aligned_cols=53 Identities=15% Similarity=0.145 Sum_probs=39.7
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhcC
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFN 89 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 89 (337)
..||.||++.-....+.+...+.+++.|++.|.|. ||.+...+..+.+.+|.+
T Consensus 99 ~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl~ 151 (461)
T 2dbn_A 99 AVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYLD 151 (461)
T ss_dssp CSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHHH
T ss_pred CCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHHH
Confidence 58999999722122234566788999999977776 899888888888888763
No 22
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=47.78 E-value=6.5 Score=34.37 Aligned_cols=36 Identities=17% Similarity=0.099 Sum_probs=32.0
Q ss_pred CCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCC
Q 019665 37 NVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEV 72 (337)
Q Consensus 37 ~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi 72 (337)
.||++++...+..++++.+.+++.+.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999986667789999999999999999999996
No 23
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=47.47 E-value=20 Score=19.89 Aligned_cols=19 Identities=32% Similarity=0.546 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHHHHcCeEE
Q 019665 48 RSLIVQQVADACKNYGFFQ 66 (337)
Q Consensus 48 ~~~~~~~L~~A~~~~Gff~ 66 (337)
...+++.|.-.|.+-|||+
T Consensus 8 Gs~LVdaL~~vCgdRGF~~ 26 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFY 26 (30)
T ss_dssp THHHHHHHHHHHGGGCEEE
T ss_pred HHHHHHHHHHHhccCcccc
Confidence 3578899999999999997
No 24
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=44.96 E-value=15 Score=31.88 Aligned_cols=50 Identities=12% Similarity=0.036 Sum_probs=37.2
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhc
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFF 88 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF 88 (337)
+.|+-||++..-..+..++|.+++.++|++.+.+-.++.+ +..+.++.|=
T Consensus 16 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G 65 (283)
T 1otj_A 16 AQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFG 65 (283)
T ss_dssp EEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 4677778874334567899999999999999999888764 4445556654
No 25
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=43.27 E-value=11 Score=31.33 Aligned_cols=36 Identities=17% Similarity=0.270 Sum_probs=29.9
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcC---eEEEEeCCC
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYG---FFQAINHEV 72 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~G---ff~l~nhgi 72 (337)
..||++++. .+.+++++.+.+++.+.+ .+.|.|||+
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~ 176 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGL 176 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEE
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCC
Confidence 479999986 566788999999998875 788999996
No 26
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=39.77 E-value=23 Score=31.27 Aligned_cols=52 Identities=19% Similarity=0.078 Sum_probs=39.5
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeC-CCChHHHHHHHHHHHHhcCC
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINH-EVPLETVERVLEVAKEFFNL 90 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~~fF~l 90 (337)
+.|+=||++..-..+.+++|.+|+.++|.+.+.+- .++.+ +..+.++.|=.+
T Consensus 20 aei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 20 ARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp EEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred ceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 46777888743467788999999999999999998 78764 445566666443
No 27
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=38.78 E-value=22 Score=31.13 Aligned_cols=51 Identities=12% Similarity=-0.012 Sum_probs=38.0
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCC-CChHHHHHHHHHHHHhcC
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHE-VPLETVERVLEVAKEFFN 89 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhg-i~~~~~~~~~~~~~~fF~ 89 (337)
+.|+-||++..-..+..++|.+++.++|++.+.+-. ++. ++..+.++.|=.
T Consensus 26 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~ 77 (301)
T 1oih_A 26 AEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGE 77 (301)
T ss_dssp EEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSC
T ss_pred eEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCC
Confidence 456667887433456789999999999999999987 875 455566666654
No 28
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=35.07 E-value=23 Score=30.81 Aligned_cols=51 Identities=12% Similarity=0.089 Sum_probs=38.5
Q ss_pred CCCcEEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCCChHHHHHHHHHHHHhcC
Q 019665 36 KNVPVIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLETVERVLEVAKEFFN 89 (337)
Q Consensus 36 ~~iPvIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~~~~~~~~~~~~fF~ 89 (337)
+.|.=|||+..-..+..++|.+|+.++|++.+.+-.++.+ +..+.++.|=.
T Consensus 14 aei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~ 64 (277)
T 3pvj_A 14 AQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGD 64 (277)
T ss_dssp EEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSC
T ss_pred EEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 4667788874335678899999999999999999988764 44555666643
No 29
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=34.55 E-value=16 Score=31.86 Aligned_cols=37 Identities=8% Similarity=-0.053 Sum_probs=31.3
Q ss_pred CCCcEEeCCCcc-hHHHHHHHHHHHHHcCeEEEEeCCC
Q 019665 36 KNVPVIDLACDD-RSLIVQQVADACKNYGFFQAINHEV 72 (337)
Q Consensus 36 ~~iPvIDls~~~-~~~~~~~L~~A~~~~Gff~l~nhgi 72 (337)
..||++|+.... ..++++.+.+++.+.-.+.|.|||+
T Consensus 155 g~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 155 GRVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TTEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CCEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 479999998433 6788999999999999999999995
No 30
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=34.19 E-value=63 Score=28.86 Aligned_cols=43 Identities=19% Similarity=0.176 Sum_probs=34.3
Q ss_pred chHHHHHHHHHHHHHcCeEEEEeCCCC----hHHHHHHHHHHHHhcC
Q 019665 47 DRSLIVQQVADACKNYGFFQAINHEVP----LETVERVLEVAKEFFN 89 (337)
Q Consensus 47 ~~~~~~~~L~~A~~~~Gff~l~nhgi~----~~~~~~~~~~~~~fF~ 89 (337)
..+++.+++.+.+..-||+.=.+|||+ .+-+..+.+++++|++
T Consensus 302 ~~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 302 PVDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 346666778888888888766789875 5889999999999974
No 31
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=28.89 E-value=35 Score=25.63 Aligned_cols=36 Identities=8% Similarity=-0.021 Sum_probs=25.5
Q ss_pred EEeCCCcchHHHHHHHHHHHHHcCeEEEEeCCCChH
Q 019665 40 VIDLACDDRSLIVQQVADACKNYGFFQAINHEVPLE 75 (337)
Q Consensus 40 vIDls~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~~ 75 (337)
|||++.-........|.+.|+++|+.-+--.|.+.+
T Consensus 51 VlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~ 86 (120)
T 3ghf_A 51 VINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDA 86 (120)
T ss_dssp EEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCH
T ss_pred EEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcH
Confidence 568772112234678999999999999888887655
No 32
>3rcq_A Aspartyl/asparaginyl beta-hydroxylase; structural genomics, structural genomics consortium, SGC, oxidoreductase, human; HET: OGA; 2.05A {Homo sapiens}
Probab=26.72 E-value=72 Score=26.22 Aligned_cols=44 Identities=16% Similarity=0.182 Sum_probs=32.6
Q ss_pred EEEEechhhHHhhCCccc----cccccccCCCCCCeEEEEe-eeCCCCC
Q 019665 248 FVINIGDQLQALSNGRYK----SVWHRAIVNAEKARMSVAS-FLCPNND 291 (337)
Q Consensus 248 ~vVn~Gd~l~~~T~G~~~----s~~HRV~~~~~~~R~Si~~-F~~p~~d 291 (337)
.-+.||+.-..|..|..- |-.|.|...+++.|+-+.+ |.+|+..
T Consensus 139 ~~i~V~~~~~~w~eGe~~~fDds~~Hev~N~~d~~RvvL~~D~~rPdl~ 187 (197)
T 3rcq_A 139 CKIRCANETKTWEEGKVLIFDDSFEHEVWQDASSFRLIFIVDVWHPELT 187 (197)
T ss_dssp EEEEETTEEECCCBTCEEEECTTSCEEEEECSSSCEEEEEEEEECTTSC
T ss_pred cEEEECCEEEEeeCCcEEEEcCCeEEEEEECCCCCEEEEEEeeeCCCCC
Confidence 445677777777777754 7789999988889987765 6677653
No 33
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=25.06 E-value=57 Score=28.64 Aligned_cols=65 Identities=14% Similarity=0.083 Sum_probs=37.9
Q ss_pred cccCccCC-C-------ceEEEecCCCCCceEEeeCCeeEEccCCCCeEEEEechhhHHhhCCccccccccccCCCCCCe
Q 019665 208 GLPGHTDP-N-------ALTILLQDLEVAGLQVLKDDKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVNAEKAR 279 (337)
Q Consensus 208 ~~~~HtD~-g-------~lTlL~~~~~~~GLqV~~~~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~~~~~R 279 (337)
.+.+|.|. + .+-+...=-+-+|..+..+|+-+..++ |.+.+ .| -+..|+|.+.++.+|
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~---------~d---~~~~H~v~N~g~~~R 168 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWF---------LD---AATVHSAVNFSEISR 168 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEE---------CC---TTSCEEEEESSSSCC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEE---------Ec---CCCeeEEEcCCCCCe
Confidence 48899998 2 233333211345555555664444443 44321 11 245899999999999
Q ss_pred EEEEeee
Q 019665 280 MSVASFL 286 (337)
Q Consensus 280 ~Si~~F~ 286 (337)
+.+.+=+
T Consensus 169 IhLv~D~ 175 (290)
T 1e5r_A 169 QSLCVDF 175 (290)
T ss_dssp CEEEEEE
T ss_pred EEEEEEe
Confidence 9988766
No 34
>2nrk_A Hypothetical protein GRPB; UPF0157, PFAM04229, glutamate-rich protein, enterococcus FAE PSI-2, protein structure initiative; 1.65A {Enterococcus faecalis} SCOP: d.218.1.14
Probab=24.81 E-value=8.7 Score=31.10 Aligned_cols=39 Identities=13% Similarity=0.071 Sum_probs=27.3
Q ss_pred CCCcEEeCC-CcchHHHHHHHHHHHHHcCeEEEEeCCCCh
Q 019665 36 KNVPVIDLA-CDDRSLIVQQVADACKNYGFFQAINHEVPL 74 (337)
Q Consensus 36 ~~iPvIDls-~~~~~~~~~~L~~A~~~~Gff~l~nhgi~~ 74 (337)
..=||||+- ...+...++.+.+++...||.+..+.|++.
T Consensus 49 ~AKPIIDI~v~V~~~~~~~~~~~~L~~~Gy~~~~e~~~~~ 88 (173)
T 2nrk_A 49 AAKPIIDFLVIVEEIEKVDLLQWEFERIGYEYMGEFGLSG 88 (173)
T ss_dssp CBCSCEEEEEEESCSGGGGGGHHHHHHTTCEECTTTTSTT
T ss_pred CcCCeeEEEeccCCHHHHHHHHHHHHHCCCEECCCCCCCc
Confidence 456999997 333344556678899999998876556653
No 35
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=24.57 E-value=21 Score=29.96 Aligned_cols=34 Identities=15% Similarity=0.075 Sum_probs=27.2
Q ss_pred CcEEeCCCcchHHHHHHHHHHHHHc-CeEEEEeCCC
Q 019665 38 VPVIDLACDDRSLIVQQVADACKNY-GFFQAINHEV 72 (337)
Q Consensus 38 iPvIDls~~~~~~~~~~L~~A~~~~-Gff~l~nhgi 72 (337)
||++++...+. ++++++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 88999885555 7889999999864 6777999985
No 36
>3kt7_A PKHD-type hydroxylase TPA1; double-stranded beta helix fold, dioxygenase, iron, mRNP complex, prolyl hydroxylase; HET: AKG; 1.77A {Saccharomyces cerevisiae} PDB: 3kt1_A 3kt4_A 3mgu_A
Probab=24.18 E-value=2.8e+02 Score=27.08 Aligned_cols=103 Identities=18% Similarity=0.181 Sum_probs=59.3
Q ss_pred HHHHHHHHHhcCCChHHHHhhhcCCCceeeeeecCCCCCCCCcccccCccCC-C--ceEEEec-CC--------CCCceE
Q 019665 164 YRVLELISESLGLEKDYIKKVLGEQGQHMAVNFYPPCPEPELTYGLPGHTDP-N--ALTILLQ-DL--------EVAGLQ 231 (337)
Q Consensus 164 ~~ll~~l~~~Lgl~~~~~~~~~~~~~~~lrl~~Yp~~~~~~~~~~~~~HtD~-g--~lTlL~~-~~--------~~~GLq 231 (337)
...+.+|+...|++. +.+...-+.+.+|++. .....|.|. + .+|+++. +. ..|.|+
T Consensus 104 ~~Fr~~Ls~iTGi~~------Lsg~~~D~~~a~Y~~G------~fL~~H~D~~~~RrvS~VLYLN~pd~~W~~e~GGeL~ 171 (633)
T 3kt7_A 104 KQYRDFFGYVTKAGK------LSGSKTDMSINTYTKG------CHLLTHDDVIGSRRISFILYLPDPDRKWKSHYGGGLR 171 (633)
T ss_dssp HHHHHHHHHHHTCCC------CCSSCCCEEEEEECTT------CEEEEECCCCTTEEEEEEEECSCTTSCCCGGGBCCEE
T ss_pred HHHHHHHHHHhCCcc------cCCCceeEEEEEeCCC------CeeeecCCCCCCeEEEEEEEcCCCCCCCCccCCceEE
Confidence 345567777777731 2212223556677653 246778884 2 3555542 21 245588
Q ss_pred Eee-C-------CeeEEccCCCCeEEEEechhhHHhhCCccccccccccCC-CCCCeEEEEeeeC
Q 019665 232 VLK-D-------DKWVAVNPLPNAFVINIGDQLQALSNGRYKSVWHRAIVN-AEKARMSVASFLC 287 (337)
Q Consensus 232 V~~-~-------~~W~~v~~~pg~~vVn~Gd~l~~~T~G~~~s~~HRV~~~-~~~~R~Si~~F~~ 287 (337)
++. + .....|.|.-|.++++.-.- + .++|.|... .++.|+||+-.++
T Consensus 172 Lyd~d~~~~P~~d~~~~I~P~fNrLV~F~vsp------~---~S~H~V~eV~~~~~RlSItGWF~ 227 (633)
T 3kt7_A 172 LFPSILPNVPHSDPSAKLVPQFNQIAFFKVLP------G---FSFHDXEEVKVDKHRLSIQGWYH 227 (633)
T ss_dssp ECCEEETTEECSSCSEEECCCTTEEEEEECCT------T---TCCEEECCBCSSCCEEEEEEEEE
T ss_pred EecCCCcCCCCCCceEEEecCCCeEEEEEcCC------C---CCcCCCCccCCCCCEEEEEEEec
Confidence 873 2 24778999999998875210 1 246866321 2678999986555
No 37
>3m0z_A Putative aldolase; MCSG, PSI-2, structural genomics, protein structure initiative, midwest center for structural genomics, lyase; HET: MSE; 1.20A {Klebsiella pneumoniae subsp} PDB: 3nzr_A 3lm7_A
Probab=22.99 E-value=1.2e+02 Score=25.71 Aligned_cols=40 Identities=23% Similarity=0.253 Sum_probs=32.2
Q ss_pred CcchHHHHHHHHHHHHHcCeEEEEeC-CCChHHHHHHHHHHH
Q 019665 45 CDDRSLIVQQVADACKNYGFFQAINH-EVPLETVERVLEVAK 85 (337)
Q Consensus 45 ~~~~~~~~~~L~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~ 85 (337)
.....++...+.+||.+.|| ++.=. ||+.+-.+.+.+.+.
T Consensus 169 Gl~~l~E~~avAka~a~~g~-~lEPTGGIdl~N~~~I~~i~l 209 (249)
T 3m0z_A 169 GLKHRAEFEAVAKACAAHDF-WLEPTGGIDLENYSEILKIAL 209 (249)
T ss_dssp TTTTHHHHHHHHHHHHHTTC-EEEEBSSCCTTTHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhhHHHHHHHHH
Confidence 34678999999999999999 77765 699877777777654
No 38
>1y66_A Engrailed homeodomain; protein design, dioxane, de novo protein; 1.65A {Escherichia coli} PDB: 2p6j_A
Probab=21.74 E-value=1e+02 Score=18.32 Aligned_cols=39 Identities=13% Similarity=0.282 Sum_probs=31.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHhcCCChHHHHhhh
Q 019665 147 TFKEFVSTYCSEVRGLGYRVLELISESLGLEKDYIKKVL 185 (337)
Q Consensus 147 ~fr~~~~~y~~~~~~la~~ll~~l~~~Lgl~~~~~~~~~ 185 (337)
+....+.+|.+.-.++...-+.-.+..||+....+..++
T Consensus 7 everklkefvrrhqeitqetlheyaqklglnqqaieqff 45 (52)
T 1y66_A 7 EVERKLKEFVRRHQEITQETLHEYAQKLGLNQQAIEQFF 45 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHH
Confidence 345678889999999999999999999999776666554
No 39
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=20.91 E-value=89 Score=19.38 Aligned_cols=23 Identities=13% Similarity=0.317 Sum_probs=18.5
Q ss_pred HHHHHHHHHHHHHHHhcCCChHH
Q 019665 158 EVRGLGYRVLELISESLGLEKDY 180 (337)
Q Consensus 158 ~~~~la~~ll~~l~~~Lgl~~~~ 180 (337)
+-.+++..|.+++++.||.+++.
T Consensus 18 ~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 18 QLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHhCcCccc
Confidence 34567889999999999998753
No 40
>3m6y_A 4-hydroxy-2-oxoglutarate aldolase; structural genomics, MCSG, lyase, PSI-2, protein structure initiative; HET: MSE; 1.45A {Bacillus cereus} PDB: 3n73_A 3mux_A
Probab=20.49 E-value=1.3e+02 Score=25.76 Aligned_cols=40 Identities=23% Similarity=0.263 Sum_probs=32.2
Q ss_pred CcchHHHHHHHHHHHHHcCeEEEEeC-CCChHHHHHHHHHHH
Q 019665 45 CDDRSLIVQQVADACKNYGFFQAINH-EVPLETVERVLEVAK 85 (337)
Q Consensus 45 ~~~~~~~~~~L~~A~~~~Gff~l~nh-gi~~~~~~~~~~~~~ 85 (337)
.....++...+.+||.+.|| ++.=. ||+.+-.+.+.+.+.
T Consensus 192 Gl~~leEl~avAkAca~~g~-~lEPTGGIdl~Nf~~I~~i~l 232 (275)
T 3m6y_A 192 GLAHEEEYRAVAKACAEEGF-ALEPTGGIDKENFETIVRIAL 232 (275)
T ss_dssp TTTTHHHHHHHHHHHHHHTC-EEEEBSSCCTTTHHHHHHHHH
T ss_pred CcccHHHHHHHHHHHHHcCc-eECCCCCccHhHHHHHHHHHH
Confidence 34678999999999999999 77765 699887777777654
Done!