Query 019666
Match_columns 337
No_of_seqs 243 out of 1028
Neff 6.1
Searched_HMMs 29240
Date Mon Mar 25 05:15:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019666.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019666hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3pfy_A OTU domain-containing p 100.0 1.2E-39 4E-44 292.0 9.7 145 162-336 35-181 (185)
2 3by4_A OTU1, ubiquitin thioest 100.0 3.9E-35 1.3E-39 268.1 10.9 123 182-336 16-139 (212)
3 3phx_A RNA-directed RNA polyme 100.0 3.9E-31 1.3E-35 236.9 11.7 120 186-337 31-160 (185)
4 3phu_A RNA-directed RNA polyme 100.0 4.6E-31 1.6E-35 241.9 10.9 120 186-337 31-160 (219)
5 1tff_A Ubiquitin thiolesterase 99.9 1.6E-26 5.6E-31 213.9 10.7 99 217-337 131-231 (234)
6 2zfy_A Ubiquitin thioesterase 99.9 1.2E-24 4.3E-29 201.3 9.3 98 217-336 134-234 (234)
7 4dhi_B Ubiquitin thioesterase 99.9 1.3E-22 4.3E-27 191.8 7.5 146 172-337 64-274 (284)
8 4ddg_A Ubiquitin-conjugating e 99.8 3.9E-21 1.3E-25 190.3 10.5 130 185-336 207-399 (399)
9 3dkb_A Tumor necrosis factor, 98.7 4.7E-08 1.6E-12 94.3 8.8 138 184-336 110-282 (390)
10 3zrh_A Ubiquitin thioesterase 98.6 1.2E-07 3.9E-12 93.0 8.6 141 185-336 188-348 (454)
11 3lay_A Zinc resistance-associa 57.3 31 0.001 29.9 7.3 60 35-98 69-134 (175)
12 3i00_A HIP-I, huntingtin-inter 43.6 1E+02 0.0034 25.0 7.9 50 40-97 11-60 (120)
13 3he5_B Synzip2; heterodimeric 40.8 80 0.0027 21.1 5.6 36 46-93 12-47 (52)
14 3twe_A Alpha4H; unknown functi 39.7 26 0.00088 20.6 2.7 17 50-66 7-23 (27)
15 1l8d_A DNA double-strand break 36.2 78 0.0027 24.4 6.1 41 42-94 62-102 (112)
16 1jad_A PLC-beta, phospholipase 35.7 1.1E+02 0.0039 27.9 7.8 30 76-105 100-129 (251)
17 3mq7_A Bone marrow stromal ant 35.5 78 0.0027 25.7 5.9 18 46-63 66-83 (121)
18 4h22_A Leucine-rich repeat fli 33.3 73 0.0025 25.3 5.3 45 40-96 40-84 (103)
19 2vof_A BCL-2-related protein A 32.0 38 0.0013 28.4 3.8 66 216-284 37-104 (157)
20 1o0l_A Apoptosis regulator BCL 30.7 95 0.0033 26.7 6.2 90 191-284 11-111 (188)
21 1jad_A PLC-beta, phospholipase 30.2 2.6E+02 0.0088 25.5 9.2 18 43-60 126-143 (251)
22 1gmj_A ATPase inhibitor; coile 29.5 60 0.0021 24.8 4.1 22 83-105 57-78 (84)
23 1ci6_A Transcription factor AT 29.0 1.3E+02 0.0043 21.3 5.6 35 48-94 20-54 (63)
24 3azd_A Short alpha-tropomyosin 28.6 16 0.00056 23.5 0.7 29 53-93 6-34 (37)
25 3pzp_A DNA polymerase kappa; D 27.1 44 0.0015 33.5 3.8 73 135-207 32-109 (517)
26 2eqb_B RAB guanine nucleotide 26.6 2.1E+02 0.0073 22.3 6.9 41 49-94 17-57 (97)
27 1gmj_A ATPase inhibitor; coile 26.0 1.8E+02 0.0063 22.1 6.2 23 46-68 53-75 (84)
28 2xu6_A MDV1 coiled coil; prote 24.2 1.2E+02 0.0041 22.5 4.8 30 51-92 21-50 (72)
29 4hw4_A Induced myeloid leukemi 22.8 62 0.0021 27.2 3.4 66 217-286 39-106 (157)
30 2dgc_A Protein (GCN4); basic d 22.4 1.2E+02 0.0043 21.5 4.5 14 81-94 48-61 (63)
31 2nl9_A Fusion protein consisti 22.0 58 0.002 27.2 3.1 65 217-285 39-105 (157)
32 2w3l_A BCL2-XL, apoptosis regu 20.7 1.1E+02 0.0039 24.9 4.6 64 217-284 31-95 (144)
33 3bas_A Myosin heavy chain, str 20.3 1.8E+02 0.0063 21.8 5.4 47 48-99 11-57 (89)
No 1
>3pfy_A OTU domain-containing protein 5; structural genomics, structural genomics consortium, SGC, PE C65 otubain, hydrolase; HET: MSE PG4; 1.70A {Homo sapiens} PDB: 3tmp_A* 3tmo_A*
Probab=100.00 E-value=1.2e-39 Score=292.01 Aligned_cols=145 Identities=23% Similarity=0.399 Sum_probs=110.7
Q ss_pred HHhcccCCchhHHHHHHHHhccCCCEEeeeCCCCcchHHHHHHHHhhccCCCCCccHHHHHHHHHHHHhcCccccccccc
Q 019666 162 EQSNIVSDRTVEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYL 241 (337)
Q Consensus 162 e~~~~~~~r~~E~~~l~~~L~~~gL~i~~I~~DGnCLFrAIa~QL~~~~~~~~~~~~~~LR~~~a~yi~~n~d~F~pFl~ 241 (337)
++...++.+..|..-++.+|+.+||.+++||+|||||||||++||++ .+..|..||+.|++||++|+++|.|||.
T Consensus 35 ~~~~~~~~~~~e~~~~~~l~~~~gL~~~~I~~DGnCLFrAia~qL~g-----~~~~h~~LR~~vv~yi~~n~d~f~~Fv~ 109 (185)
T 3pfy_A 35 EAMDPATVEQQEHWFEKALRDKKGFIIKQMKEDGACLFRAVADQVYG-----DQDMHEVVRKHCMDYLMKNADYFSNYVT 109 (185)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHHCCEEECCCCSTTHHHHHHHHHHHS-----CGGGHHHHHHHHHHHHHHTHHHHTTCC-
T ss_pred HhccCCCHHHHHHHHHHHHHHHCCcEEEeeCCCCChHHHHHHHHHhC-----CchHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34444556899999999999999999999999999999999999998 4678999999999999999999999995
Q ss_pred cccccchhhhhhhhhhHHHHHHHhcCCcccccHHHHHHHHHhhcccEEEEECCCCceE-e-CCCcCCCCCCCCCCeEEEE
Q 019666 242 SENMIGEESAQSQVERFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPDVE-M-GKEYSNGGSDSSGSSIILS 319 (337)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~Y~~~m~~~~~WGG~lEL~ALS~~l~v~I~V~~~~~~~~~-i-g~ef~~~~~~~~~~~I~L~ 319 (337)
+ +|++||++|+++++|||++||+|||++|+++|.||+.+++++. + |.+. ...++|+|+
T Consensus 110 ~--------------~~e~Y~~~m~~~~~WGg~iEL~AlS~~~~v~I~V~~~~~~~i~i~~g~~~------~~~~~I~L~ 169 (185)
T 3pfy_A 110 E--------------DFTTYINRKRKNNCHGNHIEMQAMAEMYNRPVEVYQYSTEPINTFHGIHQ------NEDEPIRVS 169 (185)
T ss_dssp ------------------------------CCHHHHHHHHHHHTSCEEEESSCSSCSEEECTTSC------CTTSCEEEE
T ss_pred c--------------cHHHHHHHhhCCCccchHHHHHHHHHhhCCcEEEEECCCCCeEEecCccC------CCCCEEEEE
Confidence 3 6999999999999999999999999999999999998875554 3 3222 236899999
Q ss_pred eccCCCCCCCccccccc
Q 019666 320 YHRHAFGLGEHYNSVIP 336 (337)
Q Consensus 320 Y~~h~y~LGeHYnSv~p 336 (337)
||+ |+|||||++
T Consensus 170 Y~~-----~~HYnSv~~ 181 (185)
T 3pfy_A 170 YHR-----NIHYNSVVN 181 (185)
T ss_dssp EET-----TTEEEEEEC
T ss_pred ECC-----CCCcccccC
Confidence 998 499999986
No 2
>3by4_A OTU1, ubiquitin thioesterase OTU1; ubiquitin hydrolase, deubiquitinase, cell cycle, hydrolase; 1.55A {Saccharomyces cerevisiae} PDB: 3c0r_A
Probab=100.00 E-value=3.9e-35 Score=268.08 Aligned_cols=123 Identities=20% Similarity=0.385 Sum_probs=109.0
Q ss_pred ccCCCEEeeeCCCCcchHHHHHHHHhhccCCCCCccHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHH
Q 019666 182 GPLGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENY 261 (337)
Q Consensus 182 ~~~gL~i~~I~~DGnCLFrAIa~QL~~~~~~~~~~~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y 261 (337)
...||.+++||+|||||||||++|| + .+..|..||+.||+||++|+++|.+|+.+ .+|++|
T Consensus 16 ~~~~l~~~~i~~DGnCLFrAva~qL-~-----~~~~~~~lR~~vv~yi~~n~d~f~e~~~~-------------~~~e~Y 76 (212)
T 3by4_A 16 GENVLSVHPVLDDNSCLFHAIAYGI-F-----KQDSVRDLREMVSKEVLNNPVKFNDAILD-------------KPNKDY 76 (212)
T ss_dssp CCSEEEEECCCCSTTHHHHHHHHHH-H-----SSCCSHHHHHHHHHHHHHCTTTTCHHHHT-------------SCHHHH
T ss_pred CCCCeEEEEeCCCCchHHHHHHHHh-C-----CchHHHHHHHHHHHHHHHCHHHHhhhhcC-------------CCHHHH
Confidence 4458999999999999999999999 5 35689999999999999999999877754 379999
Q ss_pred HHHhcCCcccccHHHHHHHHHhhcccEEEEECCC-CceEeCCCcCCCCCCCCCCeEEEEeccCCCCCCCccccccc
Q 019666 262 CKEVESTAAWGGELELRALTHCLRKHIMIYSGSF-PDVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIP 336 (337)
Q Consensus 262 ~~~m~~~~~WGG~lEL~ALS~~l~v~I~V~~~~~-~~~~ig~ef~~~~~~~~~~~I~L~Y~~h~y~LGeHYnSv~p 336 (337)
|.+|+++++|||++||+|||++|+++|.||+.++ +.+.||+++ ..++|+|+|+ |+|||||++
T Consensus 77 ~~~m~~~~~WGg~iEL~Als~~~~~~I~V~~~~~~~~~~~~~~~-------~~~~I~L~Y~------g~HYdsl~~ 139 (212)
T 3by4_A 77 AQWILKMESWGGAIEIGIISDALAVAIYVVDIDAVKIEKFNEDK-------FDNYILILFN------GIHYDSLTM 139 (212)
T ss_dssp HHHTTSTTSCCCHHHHHHHHHHHTCEEEEEETTTTEEEEESTTT-------CSEEEEEEEC------SSCEEEEEE
T ss_pred HHHhcCCCEEccHHHHHHHHHHHCCCEEEEECCCCCeEEeCCCC-------CCCeEEEEEc------CCcceEEec
Confidence 9999999999999999999999999999999874 566787654 2679999997 799999975
No 3
>3phx_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase-protein complex; 1.60A {Crimean-congo hemorrhagic fever virus} PDB: 3phw_A 3pt2_A 3pse_A 3prp_A 3prm_A
Probab=99.97 E-value=3.9e-31 Score=236.89 Aligned_cols=120 Identities=17% Similarity=0.319 Sum_probs=100.1
Q ss_pred CEEeeeCCCCcchHHHHHHHHhhccCCCCCcc-----HHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHH
Q 019666 186 LTVNDIKPDGHCLYRAVEDQLAHLSGGASPYN-----FQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFEN 260 (337)
Q Consensus 186 L~i~~I~~DGnCLFrAIa~QL~~~~~~~~~~~-----~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~ 260 (337)
+.+..||||||||||||++||++.. +.. |..||+.|++||++|+++| +.+ .+|++
T Consensus 31 ~~v~rv~gDGnCLFrAva~qL~~~~----~~~~~~~~~~~LR~~~~~yi~~~~~~~---~~~-------------~~~~~ 90 (185)
T 3phx_A 31 FEIVRQPGDGNCFYHSIAELTMPNK----TDHSYHYIKRLTESAARKYYQEEPEAR---LVG-------------LSLED 90 (185)
T ss_dssp EEEECCCSSTTHHHHHHHHHHSTTC----CTTTHHHHHHHHHHHHHHHGGGCTTHH---HHC-------------CCHHH
T ss_pred eEEEccCCCCchHHHHHHHHHhCCC----ccchhhhHHHHHHHHHHHHHHhChHhh---hcC-------------CCHHH
Confidence 7788999999999999999998741 234 8999999999999999983 222 47999
Q ss_pred HHHHhcCCcccccHHHHHHHHHhhcccEEEEECCCCc-----eEeCCCcCCCCCCCCCCeEEEEeccCCCCCCCcccccc
Q 019666 261 YCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFPD-----VEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 335 (337)
Q Consensus 261 Y~~~m~~~~~WGG~lEL~ALS~~l~v~I~V~~~~~~~-----~~ig~ef~~~~~~~~~~~I~L~Y~~h~y~LGeHYnSv~ 335 (337)
||++|+++++|||++||+|||++|+++|+||+.+++. +.+|++. ..++|+|+|++ |+|||||+
T Consensus 91 Y~~~m~~~~~WGg~iEL~Als~~~~v~I~V~~~d~~~~~~~i~~f~~~~-------~~~~I~L~Y~g-----~~HYdsl~ 158 (185)
T 3phx_A 91 YLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGD-------VFTAVNLLHSG-----QTHFDALR 158 (185)
T ss_dssp HHHHHTSTTCCCBHHHHHHHHHHHCCCEEEEEC--CCBCCEEEEESSCC-------TTTSEEEEEET-----TTEEEEEE
T ss_pred HHHHhhCCCccCcHHHHHHHHHHHCCcEEEEEecCCCCceEEEEcCCCC-------CCCEEEEEECC-----CcCchhce
Confidence 9999999999999999999999999999999977643 3465532 26799999984 49999998
Q ss_pred cC
Q 019666 336 PI 337 (337)
Q Consensus 336 p~ 337 (337)
|+
T Consensus 159 ~~ 160 (185)
T 3phx_A 159 IL 160 (185)
T ss_dssp EC
T ss_pred EC
Confidence 74
No 4
>3phu_A RNA-directed RNA polymerase L; OTU domain, DE-ubiquitinase, DE-isgylase, hydrolase; 2.20A {Crimean-congo hemorrhagic fever VIRUSIBAR10200}
Probab=99.97 E-value=4.6e-31 Score=241.86 Aligned_cols=120 Identities=16% Similarity=0.306 Sum_probs=101.9
Q ss_pred CEEeeeCCCCcchHHHHHHHHhhccCCCCCcc-----HHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHH
Q 019666 186 LTVNDIKPDGHCLYRAVEDQLAHLSGGASPYN-----FQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFEN 260 (337)
Q Consensus 186 L~i~~I~~DGnCLFrAIa~QL~~~~~~~~~~~-----~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~ 260 (337)
+.+..||||||||||||++||++.. +.. |..||+.|++||++|+++| +.+ .+|++
T Consensus 31 ~~V~rvpgDGnCLFrAVs~qL~~~~----~~~~~~~~h~~LR~~va~yi~~n~d~~---~~~-------------~~fee 90 (219)
T 3phu_A 31 FEIVRQPGDGNCFYHSIAELTMPNK----TDHSYHYIKRLTESAARKYYQEEPEAR---LVG-------------LSLED 90 (219)
T ss_dssp EEEECCCCSSCHHHHHHHHHHCTTC----CTTTHHHHHHHHHHHHHHHGGGCHHHH---HHC-------------CCHHH
T ss_pred eEEEccCCCCchHHHHHHHHHhCCC----ccchhhhHHHHHHHHHHHHHHhChhhh---hcC-------------CCHHH
Confidence 7789999999999999999998741 234 8999999999999999983 222 47999
Q ss_pred HHHHhcCCcccccHHHHHHHHHhhcccEEEEECCCC-----ceEeCCCcCCCCCCCCCCeEEEEeccCCCCCCCcccccc
Q 019666 261 YCKEVESTAAWGGELELRALTHCLRKHIMIYSGSFP-----DVEMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVI 335 (337)
Q Consensus 261 Y~~~m~~~~~WGG~lEL~ALS~~l~v~I~V~~~~~~-----~~~ig~ef~~~~~~~~~~~I~L~Y~~h~y~LGeHYnSv~ 335 (337)
||++|+++++|||++||+|||++|+++|+||+.+.+ .+.+|++. ..++|+|+|++ |+|||||+
T Consensus 91 Y~~~m~~~g~WGG~iEL~AlS~~~~v~I~V~~~d~~g~~~~i~~fge~~-------~~~~I~L~Y~g-----~~HYdSL~ 158 (219)
T 3phu_A 91 YLKRMLSDNEWGSTLEASMLAKEMGITIIIWTVAASDEVEAGIKFGDGD-------VFTAVNLLHSG-----QTHFDALR 158 (219)
T ss_dssp HHHHHHSTTCCCCHHHHHHHHHHTTCCEEEEEESSSSBEEEEEEESSCC-------TTTSEEEEEET-----TTEEEEEE
T ss_pred HHHHhcCCCccCCHHHHHHHHHHhCCCEEEEEecCCCCceeEEEecCCC-------CCCeEEEEECC-----CcCchhhe
Confidence 999999999999999999999999999999998766 34566542 26799999984 59999998
Q ss_pred cC
Q 019666 336 PI 337 (337)
Q Consensus 336 p~ 337 (337)
|+
T Consensus 159 ~~ 160 (219)
T 3phu_A 159 IL 160 (219)
T ss_dssp EC
T ss_pred EC
Confidence 74
No 5
>1tff_A Ubiquitin thiolesterase protein OTUB2; hydrolase; 2.10A {Homo sapiens} SCOP: d.3.1.11
Probab=99.93 E-value=1.6e-26 Score=213.90 Aligned_cols=99 Identities=23% Similarity=0.375 Sum_probs=79.8
Q ss_pred cHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHHHH-HhcCCcccccHHHHHHHHHhhcccEEEEECCC
Q 019666 217 NFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCK-EVESTAAWGGELELRALTHCLRKHIMIYSGSF 295 (337)
Q Consensus 217 ~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y~~-~m~~~~~WGG~lEL~ALS~~l~v~I~V~~~~~ 295 (337)
.+..||..++.||+.|+|+|.|||.++ .+|++||. .|+.+++|||++||+|||++|++||.|++.++
T Consensus 131 iv~~lR~lta~~i~~~~d~f~pFi~~~------------~~~~~yC~~~ve~~~~~~~~iei~ALa~aL~v~I~V~~~d~ 198 (234)
T 1tff_A 131 IVQFLRLLTSAFIRNRADFFRHFIDEE------------MDIKDFCTHEVEPMATECDHIQITALSQALSIALQVEYVDE 198 (234)
T ss_dssp HHHHHHHHHHHHHHHTHHHHGGGSCTT------------SCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-
T ss_pred HHHHHHHHHHHHHHHCHHHHhhhhcCC------------CCHHHHHHHHhhhhhcccccHHHHHHHHHhCCCEEEEEcCC
Confidence 356799999999999999999999752 26999999 79999999999999999999999999999887
Q ss_pred CceEe-CCCcCCCCCCCCCCeEEEEeccCCCCCCCcccccccC
Q 019666 296 PDVEM-GKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 337 (337)
Q Consensus 296 ~~~~i-g~ef~~~~~~~~~~~I~L~Y~~h~y~LGeHYnSv~p~ 337 (337)
+...+ ...|.. ...+.|+|+|+ ++|||+|+|.
T Consensus 199 ~~~~~~~~~~~~----~~~~~I~LlY~------pgHYdily~~ 231 (234)
T 1tff_A 199 MDTALNHHVFPE----AATPSVYLLYK------TSHYNILYAA 231 (234)
T ss_dssp ------CCCCCC----CSSCSEEEEEE------TTEEEEEEEC
T ss_pred CCCccccccCCC----CCCCeEEEEEC------CCCceecccC
Confidence 65222 223432 34678999998 4699999984
No 6
>2zfy_A Ubiquitin thioesterase OTUB1; otubain, structural genomics, structural genomics consortium, SGC, alternative splicing, hydrolase, immune response; 1.69A {Homo sapiens} PDB: 4ddg_B 4ddi_A
Probab=99.91 E-value=1.2e-24 Score=201.25 Aligned_cols=98 Identities=19% Similarity=0.290 Sum_probs=80.9
Q ss_pred cHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHHHH-HhcCCcccccHHHHHHHHHhhcccEEEEECCC
Q 019666 217 NFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCK-EVESTAAWGGELELRALTHCLRKHIMIYSGSF 295 (337)
Q Consensus 217 ~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y~~-~m~~~~~WGG~lEL~ALS~~l~v~I~V~~~~~ 295 (337)
.+..||..++.||+.|+|+|.|||.++ .+|++||. .|+.+++|||++||.|||++|++||.|++.++
T Consensus 134 ~v~~lR~lta~yi~~~~d~f~pFi~~~------------~~~e~yc~~~ve~~~~~~~~i~i~ALa~al~v~I~V~~~d~ 201 (234)
T 2zfy_A 134 LVVYLRLLTSGYLQRESKFFEHFIEGG------------RTVKEFCQQEVEPMCKESDHIHIIALAQALSVSIQVEYMDR 201 (234)
T ss_dssp HHHHHHHHHHHHHHHTHHHHGGGCCSS------------CCHHHHHHHHTSSTTCCCCHHHHHHHHHHHTCCEEEEECC-
T ss_pred HHHHHHHHHHHHHHHCHHHHhcccCCC------------CCHHHHHHHHhhhHhhcCCHHHHHHHHHHhCCCEEEEEcCC
Confidence 457899999999999999999999752 36999997 69999999999999999999999999999886
Q ss_pred Cce--EeCCCcCCCCCCCCCCeEEEEeccCCCCCCCccccccc
Q 019666 296 PDV--EMGKEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIP 336 (337)
Q Consensus 296 ~~~--~ig~ef~~~~~~~~~~~I~L~Y~~h~y~LGeHYnSv~p 336 (337)
+.. ..+..|+. +..++|+|+|+. +|||+|+|
T Consensus 202 ~~~~~v~~~~f~~----~~~p~I~LlY~p------gHYdiLy~ 234 (234)
T 2zfy_A 202 GEGGTTNPHIFPE----GSEPKVYLLYRP------GHYDILYK 234 (234)
T ss_dssp CCSSCCEEEEEST----TCCCSEEEEEET------TEEEEEEC
T ss_pred CCCCcccceeCCC----CCCCeEEEEECC------CCcccCCC
Confidence 541 12234432 236789999985 59999998
No 7
>4dhi_B Ubiquitin thioesterase otubain-like; ubiquitin E2 enzyme fold, ubiquitination, hydrolase-ligase C; 1.80A {Caenorhabditis elegans} PDB: 4dhj_A 4dhz_A
Probab=99.86 E-value=1.3e-22 Score=191.79 Aligned_cols=146 Identities=20% Similarity=0.310 Sum_probs=106.8
Q ss_pred hHHHHHHHHhccCCCEEeeeCCCCcchHHHHHHHHhhccC-----------------------C----------------
Q 019666 172 VEDEKLEKKLGPLGLTVNDIKPDGHCLYRAVEDQLAHLSG-----------------------G---------------- 212 (337)
Q Consensus 172 ~E~~~l~~~L~~~gL~i~~I~~DGnCLFrAIa~QL~~~~~-----------------------~---------------- 212 (337)
+=.+++..+- ..--.++.|.|||||+|||++..+...-. +
T Consensus 64 ~~~~Ki~~L~-~~Y~~~R~~RGDGNCFyRAf~F~ylE~Ll~~~~e~~r~~~~~~~s~~~L~~~G~~~~~~eDF~d~f~el 142 (284)
T 4dhi_B 64 AFLSKATELS-EVYGEIRYIRGDGNCFYRAILVGLIEIMLKDRARLEKFIASSRDWTRTLVELGFPDWTCTDFCDFFIEF 142 (284)
T ss_dssp HHHHHHHHHH-TTEEEEECBCCSTTHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HhccceeeecCCCchhHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHHHCCCchhhHHHHHHHHHHH
Confidence 4444444433 33456889999999999999987743200 0
Q ss_pred -------C---------------CCccHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHHHH-HhcCCc
Q 019666 213 -------A---------------SPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCK-EVESTA 269 (337)
Q Consensus 213 -------~---------------~~~~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y~~-~m~~~~ 269 (337)
. +..-+..||..++.||+.|+|+|.|||.++ .++++||. .|+.++
T Consensus 143 l~~i~~~~~~~~~L~~~Fnd~~~S~~iv~~LRllts~yi~~~~d~f~pFi~~~------------~~v~~yC~~eVe~~~ 210 (284)
T 4dhi_B 143 LEKIHSGVHTEEAVYTILNDDGSANYILMFFRLITSAFLKQNSEEYAPFIDEG------------MTVAQYCEQEIEPMW 210 (284)
T ss_dssp HHHHHHTCSCHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHHTHHHHGGGSCTT------------CCHHHHHHHHTSSTT
T ss_pred HHHHhcCCCcHHHHHHHhcCcccchHHHHHHHHHHHHHHHHCHHHHHhhcCCC------------CCHHHHHHHhceehh
Confidence 0 012367899999999999999999999752 36999999 899999
Q ss_pred ccccHHHHHHHHHhhcccEEEEECCCCc-eEeC-CC-cCCCCCCCCCCeEEEEeccCCCCCCCcccccccC
Q 019666 270 AWGGELELRALTHCLRKHIMIYSGSFPD-VEMG-KE-YSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIPI 337 (337)
Q Consensus 270 ~WGG~lEL~ALS~~l~v~I~V~~~~~~~-~~ig-~e-f~~~~~~~~~~~I~L~Y~~h~y~LGeHYnSv~p~ 337 (337)
.|||+++|.|||++|+++|.|+..++.. ..+. .. |.. +.....+.|+|.|.. .|||.|+|.
T Consensus 211 ~e~d~leI~ALa~aL~v~I~V~ylDrs~g~~v~~h~~fp~-~~~~~~p~I~LLYrp------gHYDILY~~ 274 (284)
T 4dhi_B 211 KDADHLAINSLIKAAGTRVRIEYMDRTAAPNGGWHYDIPS-DDQQIAPEITLLYRP------GHYDVIYKK 274 (284)
T ss_dssp CCCCHHHHHHHHHHTTCCEEEEESSGGGCTTSSSEEEESC-CCSCCCCSEEEEEET------TEEEEEEEC
T ss_pred hcccHHHHHHHHHHhCCcEEEEEecCCCCCCCcccccCCC-CCCCCCCEEEEeecC------CCccccccC
Confidence 9999999999999999999999987521 1111 01 311 111234789999994 799999984
No 8
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=99.84 E-value=3.9e-21 Score=190.30 Aligned_cols=130 Identities=21% Similarity=0.317 Sum_probs=101.7
Q ss_pred CCEEeeeCCCCcchHHHHHHHHhhccC-----------------------CCC---------------------------
Q 019666 185 GLTVNDIKPDGHCLYRAVEDQLAHLSG-----------------------GAS--------------------------- 214 (337)
Q Consensus 185 gL~i~~I~~DGnCLFrAIa~QL~~~~~-----------------------~~~--------------------------- 214 (337)
--.++.|.|||||+|||+++++..... +..
T Consensus 207 y~~~R~vrgDGNCFYRAf~f~ylE~ll~~~~e~~r~~~~~~~~~~~l~~~g~~~~~~edf~~~f~~ll~~i~~~~~~~~L 286 (399)
T 4ddg_A 207 YSYIRKTRPDGNSFYRAFGFSHLEALLDDSKELQRFKAVSAKSKEDLVSQGFTEFTIEDFHNTFMDLIEQVEKQTSVADL 286 (399)
T ss_dssp CSEEECBCCSSCHHHHHHHHHHHHHTTTCHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHSCCCHHHH
T ss_pred cCeeeeecCCCchHHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHccCCHHHH
Confidence 447899999999999999987765321 000
Q ss_pred ----------CccHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHHHH-HhcCCcccccHHHHHHHHHh
Q 019666 215 ----------PYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCK-EVESTAAWGGELELRALTHC 283 (337)
Q Consensus 215 ----------~~~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y~~-~m~~~~~WGG~lEL~ALS~~ 283 (337)
..-+..||..++.||+.|+|+|.|||.+. .++++||. .|..+++||||++|.|||++
T Consensus 287 ~~~fnd~~~s~~iv~~lRllts~~i~~~~d~f~pFi~~~------------~~v~~yc~~~ve~~~~e~d~l~I~ALa~a 354 (399)
T 4ddg_A 287 LASFNDQSTSDYLVVYLRLLTSGYLQRESKFFEHFIEGG------------RTVKEFCQQEVEPMCKESDHIHIIALAQA 354 (399)
T ss_dssp HHHHTSHHHHHHHHHHHHHHHHHHHHHTHHHHGGGSSSS------------CCHHHHHHHHTSSTTCCBCHHHHHHHHHH
T ss_pred HHHHhcccchhhHHHHHHHHHHHHHHHCHHHHhcccCCC------------CCHHHHHHHhceeHHhhCcHHHHHHHHHH
Confidence 01356799999999999999999999752 36999999 89999999999999999999
Q ss_pred hcccEEEEECCCCc-eEeC-CCcCCCCCCCCCCeEEEEeccCCCCCCCccccccc
Q 019666 284 LRKHIMIYSGSFPD-VEMG-KEYSNGGSDSSGSSIILSYHRHAFGLGEHYNSVIP 336 (337)
Q Consensus 284 l~v~I~V~~~~~~~-~~ig-~ef~~~~~~~~~~~I~L~Y~~h~y~LGeHYnSv~p 336 (337)
|+++|.|+..++.. ..+. ..|. .+..+.|+|.|.. .|||.|+|
T Consensus 355 l~v~I~V~yld~~~~~~v~~~~~~----~~~~~~I~LLYrP------gHYDiLY~ 399 (399)
T 4ddg_A 355 LSVSIQVEYMDRGEGGTTNPHIFP----EGSEPKVYLLYRP------GHYDILYK 399 (399)
T ss_dssp HTCCCEEEECSCCSSSCCCEEETT----TTCCCCCEEEEET------BEEEEEEC
T ss_pred cCCcEEEEEcCCCCCCccceeeCC----CCCCCEEEEEEcC------CccccCCC
Confidence 99999999876521 1111 1131 1246789999986 59999987
No 9
>3dkb_A Tumor necrosis factor, alpha-induced protein 3; OTU domain, DUB domain, apoptosis, cytoplasm, DNA-binding, hydrolase, metal-binding, nucleus; 2.50A {Homo sapiens} PDB: 2vfj_A
Probab=98.66 E-value=4.7e-08 Score=94.31 Aligned_cols=138 Identities=19% Similarity=0.293 Sum_probs=86.6
Q ss_pred CCCEEeeeCCCCcchHHHHHHHHhhccCCCCCccHHHHHHHHHHHHhcCcc-ccc-----------cccccccccchhhh
Q 019666 184 LGLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSS-DFL-----------PFYLSENMIGEESA 251 (337)
Q Consensus 184 ~gL~i~~I~~DGnCLFrAIa~QL~~~~~~~~~~~~~~LR~~~a~yi~~n~d-~F~-----------pFl~~~~~~~~~~~ 251 (337)
..|....+.||||||.+|++..++|. .+....||+...+.|+.... .|. .|... +-.++.
T Consensus 110 ~rL~pL~t~GDGnCLLHAvSqamWGv-----~DrdlvLRkaL~~~L~~~~~~~fr~RW~~e~~~~q~~~~~---gL~y~e 181 (390)
T 3dkb_A 110 RKLVALKTNGDGNCLMHATSQYMWGV-----QDTDLVLRKALFSTLKETDTRNFKFRWQLESLKSQEFVET---GLCYDT 181 (390)
T ss_dssp CCEEEBCCCCSSCHHHHHHHHHHHSS-----CSTTCHHHHHHHHHHHHSCCHHHHHHHHHHHHCCCSSCC-------CCS
T ss_pred cceEEEEecCCCchHHHHHhHHhcCC-----CCHhHHHHHHHHHHHHhchHHHHHHHHHHHHHHhhhhHhh---cccccH
Confidence 35778889999999999999999994 45678999999999987653 231 12110 000000
Q ss_pred hhhhhhHHHHHHHhcCCcc--------c--ccHHHHHHHHHhhcccEEEEECC-------CC---ceEeCCCcCC---CC
Q 019666 252 QSQVERFENYCKEVESTAA--------W--GGELELRALTHCLRKHIMIYSGS-------FP---DVEMGKEYSN---GG 308 (337)
Q Consensus 252 ~~~~~~~~~Y~~~m~~~~~--------W--GG~lEL~ALS~~l~v~I~V~~~~-------~~---~~~ig~ef~~---~~ 308 (337)
..-..+|+.-+. |.++.. . =-++-|.+||+++++||+||... |. ++.||.-|.+ +.
T Consensus 182 ~ew~~EW~~Iv~-~Asp~~~~~~~~~~y~sLEeiHIFvLAhVLRRPIIV~~d~~lr~~~~Ge~~~Pi~f~GIYLPLlwpp 260 (390)
T 3dkb_A 182 RNWNDEWDNLIK-MASTDTPMARSGLQYNSLEEIHIFVLCNILRRPIIVISDKMLRSLESGSNFAPLKVGGIYLPLHWPA 260 (390)
T ss_dssp SCSSHHHHHHHH-HTSSCCCSSSSSCSSCCCCHHHHHHHHHHTTSCEEEEECCCCTTCCCC----CCCCCEEECCTTSCT
T ss_pred HHHHHHHHHHHH-HhCCCCCCCCCcchhhhHHHHHHHHHHHHhcCCEEEEechhhccccCCCccCcCccCceecCCcCCH
Confidence 001234544443 333321 1 13678999999999999999632 11 1223332321 22
Q ss_pred CCCCCCeEEEEeccCCCCCCCccccccc
Q 019666 309 SDSSGSSIILSYHRHAFGLGEHYNSVIP 336 (337)
Q Consensus 309 ~~~~~~~I~L~Y~~h~y~LGeHYnSv~p 336 (337)
+.....||.|+|.+ .||.++++
T Consensus 261 ~~C~rsPI~LgY~s------~HFsaLV~ 282 (390)
T 3dkb_A 261 QECYRYPIVLGYDS------HHFVPLVT 282 (390)
T ss_dssp TSSCSSCEEEEECS------SCEEEEEE
T ss_pred HHccCCceEEEecc------Cceeeeee
Confidence 34557899999997 69999986
No 10
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=98.57 E-value=1.2e-07 Score=93.03 Aligned_cols=141 Identities=19% Similarity=0.182 Sum_probs=89.0
Q ss_pred CCEEeeeCCCCcchHHHHHHHHhhccCCCCCccHHHHHHHHHHHHhcCccccccccc------cccccchh--hhhhhhh
Q 019666 185 GLTVNDIKPDGHCLYRAVEDQLAHLSGGASPYNFQQLRQMVAAYMRDHSSDFLPFYL------SENMIGEE--SAQSQVE 256 (337)
Q Consensus 185 gL~i~~I~~DGnCLFrAIa~QL~~~~~~~~~~~~~~LR~~~a~yi~~n~d~F~pFl~------~~~~~~~~--~~~~~~~ 256 (337)
.|......||||||-+|++..++|- .+....||+...+.|......|..-.. +...+-.+ +...-..
T Consensus 188 rL~pL~t~GDGNCLLHAvSqamWGV-----~DrdlvLRkaL~~~L~~~~~~f~~RW~~~e~~q~q~~gL~y~lde~ewq~ 262 (454)
T 3zrh_A 188 RLYALWNRTAGDCLLDSVLQATWGI-----YDKDSVLRKALHDSLHDCSHWFYTRWKDWESWYSQSFGLHFSLREEQWQE 262 (454)
T ss_dssp CEEEBCCCCSSCHHHHHHHHTTTSS-----CCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCCCCCCHHHHHH
T ss_pred ceeEeeecCCCccHHHHHHHHhhcc-----cCCcHHHHHHHHHHHHhhhHHHHHHHHHHHHHHHhhcCCcccccHHHHHH
Confidence 3667789999999999999999994 556789999999999875444421110 00000000 0000123
Q ss_pred hHHHHHHHhcCCcccccHHHHHHHHHhhcccEEEEECCC---------CceEeCCCcCC---CCCCCCCCeEEEEeccCC
Q 019666 257 RFENYCKEVESTAAWGGELELRALTHCLRKHIMIYSGSF---------PDVEMGKEYSN---GGSDSSGSSIILSYHRHA 324 (337)
Q Consensus 257 ~~~~Y~~~m~~~~~WGG~lEL~ALS~~l~v~I~V~~~~~---------~~~~ig~ef~~---~~~~~~~~~I~L~Y~~h~ 324 (337)
+|+.-+.-...++.==-++-+.+||+++++||+||.... .++.||.-|.+ +.+.....||.|+|.+
T Consensus 263 EW~~iv~~As~Pg~sLEeiHIFvLAhVLRRPIIV~~d~~lrs~~Ge~l~pi~f~GIYLPLlwpp~~C~rsPIvLgY~~-- 340 (454)
T 3zrh_A 263 DWAFILSLASQPGASLEQTHIFVLAHILRRPIIVYGVKYYKSFRGETLGYTRFQGVYLPLLWEQSFCWKSPIALGYTR-- 340 (454)
T ss_dssp HHHHHHHHTTSTTCCCCHHHHHHHHHHTTSCEEEEECSSCC-----CCCCCCCCEEECCTTSCGGGSCSCCEEEEEET--
T ss_pred HHHHHHHHhcCCcchHHHHHHHHHHHHhcCCeEEeccccccccCCCcCCCcccceeeccCcCCHHHhcCCceEEEecc--
Confidence 344444444556554456779999999999999998532 12233322221 1223456899999997
Q ss_pred CCCCCccccccc
Q 019666 325 FGLGEHYNSVIP 336 (337)
Q Consensus 325 y~LGeHYnSv~p 336 (337)
.||.++++
T Consensus 341 ----gHFsaLV~ 348 (454)
T 3zrh_A 341 ----GHFSALVA 348 (454)
T ss_dssp ----TEEEEEEE
T ss_pred ----cceeeeee
Confidence 59999876
No 11
>3lay_A Zinc resistance-associated protein; salmonella typhimurium L structural genomics, center for structural genomics of INFE diseases; 2.70A {Salmonella enterica subsp}
Probab=57.27 E-value=31 Score=29.86 Aligned_cols=60 Identities=20% Similarity=0.254 Sum_probs=42.2
Q ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHhh------ccCChhHHHhhhHHHHHHHHHHHHHHHHHHH
Q 019666 35 SQKKQETRDEMLSRHRKEISQLQNKETELKKAA------AKGSKAEQKAKKKQVEEEISRLSAKLREKHA 98 (337)
Q Consensus 35 ~~~~~e~~e~l~~rHrkE~k~Lq~~i~~~Kk~a------~kg~K~~~Kk~rK~v~~e~~~le~el~~rh~ 98 (337)
|.+....+.+|.+.++.+.++|..++..++... ++.|. .+=+.+.+|+..|..+|...+.
T Consensus 69 T~EQq~ql~~I~~e~r~~~~~Lr~ql~akr~EL~aL~~a~~~De----akI~aL~~Ei~~Lr~qL~~~R~ 134 (175)
T 3lay_A 69 TTEQQATAQKIYDDYYTQTSALRQQLISKRYEYNALLTASSPDT----AKINAVAKEMESLGQKLDEQRV 134 (175)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSSSCCH----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCH----HHHHHHHHHHHHHHHHHHHHHH
Confidence 445555567888999999888876665554433 34554 5567888999999988876554
No 12
>3i00_A HIP-I, huntingtin-interacting protein 1; transcription; 2.30A {Homo sapiens} PDB: 2qa7_A
Probab=43.60 E-value=1e+02 Score=24.96 Aligned_cols=50 Identities=26% Similarity=0.415 Sum_probs=34.8
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHHHHHHH
Q 019666 40 ETRDEMLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKH 97 (337)
Q Consensus 40 e~~e~l~~rHrkE~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~~rh 97 (337)
..++.++-.=+.|...|++.+..+|--+- .-=-++...|..||.+|.+..
T Consensus 11 d~rD~~Ie~Lkreie~lk~ele~l~~E~q--------~~v~ql~~~i~~Le~eL~e~r 60 (120)
T 3i00_A 11 DEKDHLIERLYREISGLKAQLENMKTESQ--------RVVLQLKGHVSELEADLAEQQ 60 (120)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHHHHH--------HHHHHHHHHHHHHHHHHHHHH
Confidence 34566777777888888887777765544 334577778888888887754
No 13
>3he5_B Synzip2; heterodimeric coiled-coil, de novo protein; 1.75A {Artificial gene}
Probab=40.83 E-value=80 Score=21.15 Aligned_cols=36 Identities=33% Similarity=0.549 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHHH
Q 019666 46 LSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKL 93 (337)
Q Consensus 46 ~~rHrkE~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el 93 (337)
.+|-+|.--.|...-+.+.|.+. .+.+||++||.|.
T Consensus 12 iarlkkdnlqlerdeqnlekiia------------nlrdeiarlenev 47 (52)
T 3he5_B 12 IARLKKDNLQLERDEQNLEKIIA------------NLRDEIARLENEV 47 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHH
T ss_pred HHHHhhhhhhhhhhHhhHHHHHH------------HHHHHHHHHHHHH
Confidence 45555555556666666666655 6778888888775
No 14
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=39.73 E-value=26 Score=20.62 Aligned_cols=17 Identities=35% Similarity=0.528 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHh
Q 019666 50 RKEISQLQNKETELKKA 66 (337)
Q Consensus 50 rkE~k~Lq~~i~~~Kk~ 66 (337)
-||+.|||.++..++|.
T Consensus 7 ykeledlqerlrklrkk 23 (27)
T 3twe_A 7 YKELEDLQERLRKLRKK 23 (27)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 47888999988777653
No 15
>1l8d_A DNA double-strand break repair RAD50 ATPase; zinc finger, DNA repair, recombination, HOOK motif, replication; HET: DNA CIT; 2.20A {Pyrococcus furiosus} SCOP: h.4.12.1
Probab=36.17 E-value=78 Score=24.45 Aligned_cols=41 Identities=22% Similarity=0.477 Sum_probs=32.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHHHH
Q 019666 42 RDEMLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLR 94 (337)
Q Consensus 42 ~e~l~~rHrkE~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~ 94 (337)
...+...+..++++|+.+|..++.... .+..++..|+.++.
T Consensus 62 ~~~~i~~~~~~l~~l~~~i~~l~~~i~------------~l~~~~~~l~~~~~ 102 (112)
T 1l8d_A 62 REELLSKYHLDLNNSKNTLAKLIDRKS------------ELERELRRIDMEIK 102 (112)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHH
Confidence 457888999999999999998876554 66777777777766
No 16
>1jad_A PLC-beta, phospholipase C beta; alpha helical coiled coil, hydrolase; 2.40A {Meleagris gallopavo} SCOP: h.4.10.1
Probab=35.67 E-value=1.1e+02 Score=27.87 Aligned_cols=30 Identities=27% Similarity=0.461 Sum_probs=19.1
Q ss_pred HhhhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 019666 76 KAKKKQVEEEISRLSAKLREKHAKELASLG 105 (337)
Q Consensus 76 Kk~rK~v~~e~~~le~el~~rh~~El~~l~ 105 (337)
+.++.-+...|..|..=+.+.|..+|..|.
T Consensus 100 ~~k~~Hl~eq~~~Lk~l~~e~Q~~QmK~Lk 129 (251)
T 1jad_A 100 RRKEQHATEQTAKITELAREKQIAELKALK 129 (251)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 344556666666666666666666666664
No 17
>3mq7_A Bone marrow stromal antigen 2; HIV, antiviral protein; 2.28A {Homo sapiens} PDB: 3mqc_A 3mqb_A 3mkx_A 3nwh_A 2xg7_A* 2x7a_A
Probab=35.52 E-value=78 Score=25.67 Aligned_cols=18 Identities=22% Similarity=0.390 Sum_probs=7.9
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 019666 46 LSRHRKEISQLQNKETEL 63 (337)
Q Consensus 46 ~~rHrkE~k~Lq~~i~~~ 63 (337)
.++-.+..++|++.|+.|
T Consensus 66 kaq~q~~vqeLqgEI~~L 83 (121)
T 3mq7_A 66 KAQGQKKVEELEGEITTL 83 (121)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 333333444445444444
No 18
>4h22_A Leucine-rich repeat flightless-interacting protei; nucleic acid sensor, transcription; 2.89A {Homo sapiens}
Probab=33.33 E-value=73 Score=25.26 Aligned_cols=45 Identities=13% Similarity=0.231 Sum_probs=29.2
Q ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHHHHHH
Q 019666 40 ETRDEMLSRHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREK 96 (337)
Q Consensus 40 e~~e~l~~rHrkE~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~~r 96 (337)
+.+++.++.=++|.++....+..+|+... .+..+++.|...|++|
T Consensus 40 Ee~eE~~aql~Re~~eK~re~e~~Kr~~~------------~L~~~~~~lk~~L~qR 84 (103)
T 4h22_A 40 LELEEQLAESRRQYEEKNKEFEREKHAHS------------ILQFQFAEVKEALKQR 84 (103)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHH
Confidence 44555666666666666666666666555 5667777777777765
No 19
>2vof_A BCL-2-related protein A1; BH3, apoptosis, Pro-surviVal, mitochondrion, protein- complex; 1.8A {Mus musculus} PDB: 2vog_A 2voh_A* 2voi_A 3i1h_A 3mqp_A 2vm6_A
Probab=31.97 E-value=38 Score=28.35 Aligned_cols=66 Identities=9% Similarity=0.149 Sum_probs=46.7
Q ss_pred ccHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHHHHHhcCCc--ccccHHHHHHHHHhh
Q 019666 216 YNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTA--AWGGELELRALTHCL 284 (337)
Q Consensus 216 ~~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y~~~m~~~~--~WGG~lEL~ALS~~l 284 (337)
.....||..+....+.|+..|.+++..-.... .......|..-.+.|-.+| .||--+-|.|++-.+
T Consensus 37 ~~~~~Lr~~~~ele~~~~~~f~~~~~~l~i~~---~~~a~~~f~~Va~elF~dg~inWGRIVal~~F~g~l 104 (157)
T 2vof_A 37 QACRVLQRVAFSVQKEVEKNLKSYLDDFHVES---IDTARIIFNQVMEKEFEDGIINWGRIVTIFAFGGVL 104 (157)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTHHHHTTCCCCS---HHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC---cchHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHH
Confidence 35678888888888889988888775422101 0112345777778887888 899999999888776
No 20
>1o0l_A Apoptosis regulator BCL-W; helical bundle, binding groove, BH3; NMR {Homo sapiens} SCOP: f.1.4.1
Probab=30.67 E-value=95 Score=26.69 Aligned_cols=90 Identities=18% Similarity=0.194 Sum_probs=56.6
Q ss_pred eCCCCcchHHH-HHHHHhhccC---------CCCCccHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHH
Q 019666 191 IKPDGHCLYRA-VEDQLAHLSG---------GASPYNFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFEN 260 (337)
Q Consensus 191 I~~DGnCLFrA-Ia~QL~~~~~---------~~~~~~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~ 260 (337)
|.-++.+|.+- |.+.|...+. .....-+..||..+-+..+.|+..|..++..-+... ......|..
T Consensus 11 ~~~~~~~L~~dYi~yrl~~~g~~~~~~~~~~~~~~~v~~~Lr~~gdele~~~~~~f~~~~~~l~i~~----~~~~~~F~~ 86 (188)
T 1o0l_A 11 SAPDTRALVADFVGYKLRQKGYVCGAGPGEGPAADPLHQAMRAAGDEFETRFRRTFSDLAAQLHVTP----GSAQQRFTQ 86 (188)
T ss_dssp SCSSHHHHHHHHHHHHHHHTTTTTTCSGGGSCSCSTTHHHHHHHHHHHHHHCSCSHHHHHHHTTTCS----STTHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHccCCCCCCCCCCCCCChhHHHHHHHHHHHHHHHHhHHHHHHHHHhcCCCC----ccHHHHHHH
Confidence 55666666664 5555543221 112233688999999999999999987764211000 012456777
Q ss_pred HHHHhcCCc-ccccHHHHHHHHHhh
Q 019666 261 YCKEVESTA-AWGGELELRALTHCL 284 (337)
Q Consensus 261 Y~~~m~~~~-~WGG~lEL~ALS~~l 284 (337)
-.+.|-.+| .||--+-|.|++-.+
T Consensus 87 Va~elF~dGinWGRIValfaF~g~L 111 (188)
T 1o0l_A 87 VSDELFQGGPNWGRLVAFFVFGAAL 111 (188)
T ss_dssp HHHHHSSSCCCHHHHHHHHHHHHHH
T ss_pred HHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 777776444 799988998887766
No 21
>1jad_A PLC-beta, phospholipase C beta; alpha helical coiled coil, hydrolase; 2.40A {Meleagris gallopavo} SCOP: h.4.10.1
Probab=30.19 E-value=2.6e+02 Score=25.48 Aligned_cols=18 Identities=11% Similarity=0.241 Sum_probs=13.2
Q ss_pred HHHHHHHHHHHHHHHHHH
Q 019666 43 DEMLSRHRKEISQLQNKE 60 (337)
Q Consensus 43 e~l~~rHrkE~k~Lq~~i 60 (337)
-.|..+|-+|.|||+.+.
T Consensus 126 K~Lk~~~ErE~KELkk~q 143 (251)
T 1jad_A 126 KALKESSESNIKDIKKKL 143 (251)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 456778888888887543
No 22
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=29.49 E-value=60 Score=24.81 Aligned_cols=22 Identities=32% Similarity=0.614 Sum_probs=14.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhc
Q 019666 83 EEEISRLSAKLREKHAKELASLG 105 (337)
Q Consensus 83 ~~e~~~le~el~~rh~~El~~l~ 105 (337)
.++|.+||.++ +||+.-|..|.
T Consensus 57 ~~ei~~le~~i-~rhk~~i~~l~ 78 (84)
T 1gmj_A 57 AKEIERLQKEI-ERHKQSIKKLK 78 (84)
T ss_dssp HHHHHHHHHHH-HHHHHHHHHHH
T ss_pred HHHHHHHHHHH-HHHHHHHHHhh
Confidence 34667777777 56777777664
No 23
>1ci6_A Transcription factor ATF-4; BZIP; 2.60A {Homo sapiens} SCOP: h.1.3.1
Probab=29.05 E-value=1.3e+02 Score=21.32 Aligned_cols=35 Identities=26% Similarity=0.436 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHHHH
Q 019666 48 RHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLR 94 (337)
Q Consensus 48 rHrkE~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~ 94 (337)
+.+.+..+|+.++..|+. ...++..+|+.|+.|+.
T Consensus 20 KKk~~~~~le~~~~~L~~------------~N~~L~~~i~~L~~E~~ 54 (63)
T 1ci6_A 20 KKRAEQEALTGECKELEK------------KNEALKERADSLAKEIQ 54 (63)
T ss_dssp HHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHHH
Confidence 344566677777777743 34477888888877754
No 24
>3azd_A Short alpha-tropomyosin, transcription factor GCN; coiled-coil, actin-binding protein, muscle protein; 0.98A {Rattus norvegicus} PDB: 1ihq_A 2k8x_A
Probab=28.58 E-value=16 Score=23.55 Aligned_cols=29 Identities=21% Similarity=0.395 Sum_probs=17.7
Q ss_pred HHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHHH
Q 019666 53 ISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKL 93 (337)
Q Consensus 53 ~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el 93 (337)
...|+.||++|+..+- .+.++...++.+|
T Consensus 6 i~avKkKiq~lq~q~d------------~aee~~~~~~~~l 34 (37)
T 3azd_A 6 LEAVRRKIRSLQEQNY------------HLENEVARLKKLV 34 (37)
T ss_dssp CHHHHHHHHHHHHHTT------------TTHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHHHH------------HHHHHHHHHHHHh
Confidence 4567777777765544 4555666665554
No 25
>3pzp_A DNA polymerase kappa; DNA nucleotidyltransferase, DNA binding nucleotide binding M binding, nucleus; HET: DNA TTD DTP; 3.34A {Homo sapiens}
Probab=27.12 E-value=44 Score=33.47 Aligned_cols=73 Identities=21% Similarity=0.245 Sum_probs=47.6
Q ss_pred CCCCccchhhHHHHHHHHHHHHHHHHHHHhcccCC--c--hhHHHHHHHHhcc-CCCEEeeeCCCCcchHHHHHHHHh
Q 019666 135 QAKPSKGTKRREKRAQQEAAREQRIQEEQSNIVSD--R--TVEDEKLEKKLGP-LGLTVNDIKPDGHCLYRAVEDQLA 207 (337)
Q Consensus 135 ~~~~sK~~~Rr~~r~~~~~~~~~~i~~e~~~~~~~--r--~~E~~~l~~~L~~-~gL~i~~I~~DGnCLFrAIa~QL~ 207 (337)
..+.||-.++..+|.++..++++++.+..+..... + ..+.+.+...|.. +.+...-+-=|-+|||.||.....
T Consensus 32 ~s~gs~f~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~le~~r~~~r~I~hiDmDaFYAsvE~~~~ 109 (517)
T 3pzp_A 32 ATKGSRFYGNELKKEKQVNQRIENMMQQKAQITSQQLRKAQLQVDRFAMELEQSRNLSNTIVHIDMDAFYAAVEMRDN 109 (517)
T ss_dssp TTTTCHHHHHHHHHHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCCCSCCEEEEEESSHHHHHHHHHC
T ss_pred hcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhhchhhHHHHHHHHHHHHHHHHhccCcCcEEEEEecCcHHHHHHHHhC
Confidence 44678888888888888888888887766554322 1 1233334444432 555555555699999999986544
No 26
>2eqb_B RAB guanine nucleotide exchange factor SEC2; coiled coil, endocytosis/exocytosis complex; 2.70A {Saccharomyces cerevisiae} SCOP: h.1.33.1
Probab=26.59 E-value=2.1e+02 Score=22.28 Aligned_cols=41 Identities=20% Similarity=0.408 Sum_probs=21.5
Q ss_pred HHHHHHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHHHH
Q 019666 49 HRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLR 94 (337)
Q Consensus 49 HrkE~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~ 94 (337)
-..+.++....+..|+.... +.+..|..+..+..+++.||+
T Consensus 17 le~~~~~~~~e~~~L~~~l~-----eE~~~R~~aE~~~~~ie~ElE 57 (97)
T 2eqb_B 17 LKRELSDRDDEVKRLREDIA-----KENELRTKAEEEADKLNKEVE 57 (97)
T ss_dssp HHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhhhHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHH
Confidence 33455555555555554444 123455566666666665554
No 27
>1gmj_A ATPase inhibitor; coiled-coil structure, P dependent oligomerization, ATP hydrolysis; 2.2A {Bos taurus} SCOP: h.4.8.1 PDB: 1ohh_H* 1hf9_A
Probab=25.99 E-value=1.8e+02 Score=22.07 Aligned_cols=23 Identities=35% Similarity=0.472 Sum_probs=14.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhc
Q 019666 46 LSRHRKEISQLQNKETELKKAAA 68 (337)
Q Consensus 46 ~~rHrkE~k~Lq~~i~~~Kk~a~ 68 (337)
+..|++|+++|+..|...|+.+.
T Consensus 53 l~~h~~ei~~le~~i~rhk~~i~ 75 (84)
T 1gmj_A 53 ISHHAKEIERLQKEIERHKQSIK 75 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 45577777777777766665554
No 28
>2xu6_A MDV1 coiled coil; protein binding, mitochondrial outer membrane, adapter prote organelle division; 2.70A {Saccharomyces cerevisiae}
Probab=24.21 E-value=1.2e+02 Score=22.46 Aligned_cols=30 Identities=20% Similarity=0.388 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHH
Q 019666 51 KEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAK 92 (337)
Q Consensus 51 kE~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~e 92 (337)
-|++++-.||..|+ ..|+-|-+.++.+|.+
T Consensus 21 sEI~EID~Ki~nL~------------~mR~ivldRlA~lEqd 50 (72)
T 2xu6_A 21 SEIRDIEVEVENLR------------QKKEKLLGKIANIEQN 50 (72)
T ss_dssp HHHHHHHHHHHHHH------------HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH------------HHHHHHHHHHHHHHhh
Confidence 58899999999984 5688899999988864
No 29
>4hw4_A Induced myeloid leukemia cell differentiation Pro 1; anti-apoptotic protein, BH3 peptides, apoptosis; 1.53A {Homo sapiens} PDB: 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 2kbw_A 4hw3_A* 4hw2_A* 3d7v_A 3io9_A 2nl9_A* 2nla_A 4g35_A* 1wsx_A 2jm6_B 2roc_A 2rod_A 3mk8_B
Probab=22.76 E-value=62 Score=27.21 Aligned_cols=66 Identities=18% Similarity=0.311 Sum_probs=46.2
Q ss_pred cHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHHHHHhcCCc--ccccHHHHHHHHHhhcc
Q 019666 217 NFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTA--AWGGELELRALTHCLRK 286 (337)
Q Consensus 217 ~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y~~~m~~~~--~WGG~lEL~ALS~~l~v 286 (337)
.+..||..+.+..+.|+..|..++..-.... ......|..-++.|-.+| .||-=+-|.|++-.+=+
T Consensus 39 ~~~~Lr~vgdele~~~~~~f~~m~~~L~it~----~~a~~~F~~Va~elF~dGi~NWGRIVaLfaFgg~la~ 106 (157)
T 4hw4_A 39 ALETLRRVGDGVQRNHETAFQGMLRKLDIKN----EDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVAK 106 (157)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHHHHCCCS----HHHHHHHHHHHHHHGGGSCCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC----chHHHHHHHHHHHHhccCCccHHHHHHHHHHHHHHHH
Confidence 4678999999999999999987664311111 112345777777777777 79999999988776643
No 30
>2dgc_A Protein (GCN4); basic domain, leucine zipper, DNA binding, eukaryotic regulatory protein, transcription/DNA complex; HET: DNA; 2.20A {Saccharomyces cerevisiae} SCOP: h.1.3.1 PDB: 1dgc_A* 1ld4_E 1ysa_C* 3p8m_D
Probab=22.43 E-value=1.2e+02 Score=21.46 Aligned_cols=14 Identities=29% Similarity=0.534 Sum_probs=5.8
Q ss_pred HHHHHHHHHHHHHH
Q 019666 81 QVEEEISRLSAKLR 94 (337)
Q Consensus 81 ~v~~e~~~le~el~ 94 (337)
.+..+++.|..+|.
T Consensus 48 ~L~~ev~~Lr~~l~ 61 (63)
T 2dgc_A 48 HLENEVARLKKLVG 61 (63)
T ss_dssp HHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHh
Confidence 44445555544443
No 31
>2nl9_A Fusion protein consisting of induced myeloid LEUK differentiation protein MCL-1 homolog...; apoptosis, MCL-1, BIM; HET: MSE; 1.55A {Rattus norvegicus} PDB: 2nla_A 3d7v_A 3io9_A 3kj0_A 2pqk_A 3kj1_A 3kj2_A 3kz0_A 3mk8_A 1wsx_A 2jm6_B 2roc_A 2rod_A 2kbw_A 3mk8_B
Probab=22.01 E-value=58 Score=27.16 Aligned_cols=65 Identities=17% Similarity=0.299 Sum_probs=46.3
Q ss_pred cHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHHHHHhcCCc--ccccHHHHHHHHHhhc
Q 019666 217 NFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTA--AWGGELELRALTHCLR 285 (337)
Q Consensus 217 ~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y~~~m~~~~--~WGG~lEL~ALS~~l~ 285 (337)
.+..||..+.+..+.|+..|..++..-+... ......|..-++.|-.+| .||-=+-|.|++-.+-
T Consensus 39 ~~~~Lr~i~dele~~~~~~f~~~~~~l~i~~----~~~~~~f~~Va~elF~dGi~nWGRIValf~F~~~la 105 (157)
T 2nl9_A 39 ALETLRRVGDGVQRNHETAFQGMLRKLDIKN----EDDVKSLSRVMIHVFSDGVTNWGRIVTLISFGAFVA 105 (157)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHHHCCCS----TTCCHHHHHHHHHHGGGSCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHcCCCC----chHHHHHHHHHHHHhcCCCCChHHHHHHHHHHHHHH
Confidence 4678999999999999999987664211100 011234777788887888 5999999999887663
No 32
>2w3l_A BCL2-XL, apoptosis regulator BCL-2; HET: DRO; 2.10A {Homo sapiens} PDB: 2o2f_A*
Probab=20.65 E-value=1.1e+02 Score=24.88 Aligned_cols=64 Identities=16% Similarity=0.248 Sum_probs=42.9
Q ss_pred cHHHHHHHHHHHHhcCccccccccccccccchhhhhhhhhhHHHHHHHhcCCc-ccccHHHHHHHHHhh
Q 019666 217 NFQQLRQMVAAYMRDHSSDFLPFYLSENMIGEESAQSQVERFENYCKEVESTA-AWGGELELRALTHCL 284 (337)
Q Consensus 217 ~~~~LR~~~a~yi~~n~d~F~pFl~~~~~~~~~~~~~~~~~~~~Y~~~m~~~~-~WGG~lEL~ALS~~l 284 (337)
.+..||..+-+..+.|+..|..++..-.... ......|..-++.|-.+| .||--+-|.|++-.+
T Consensus 31 ~~~~Lr~~gdele~~~~~~f~~~~~~l~i~~----~~~~~~f~~Va~elF~dGinWGRIValf~F~g~l 95 (144)
T 2w3l_A 31 VHKTLREAGDDFSRRYRRDFAEMSSGLHLTP----FTARGRFATVVEELFRDGVNWGRIVAFFEFGGVM 95 (144)
T ss_dssp HHHHHHHHHHHHHHHTHHHHHHHHTTCCCCT----TTHHHHHHHHHHHHTTTCCCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhHHHHHHHHHHcCCCC----ccHHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHH
Confidence 4678888888888889888866553311100 112456666666655444 799999999888766
No 33
>3bas_A Myosin heavy chain, striated muscle/general control protein GCN4 chimera; alpha-helical coiled coil, disorder, salt links; 2.30A {Argopecten irradians} SCOP: h.1.26.1 PDB: 1nkn_A 3bat_A
Probab=20.32 E-value=1.8e+02 Score=21.84 Aligned_cols=47 Identities=21% Similarity=0.278 Sum_probs=33.8
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCChhHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 019666 48 RHRKEISQLQNKETELKKAAAKGSKAEQKAKKKQVEEEISRLSAKLREKHAK 99 (337)
Q Consensus 48 rHrkE~k~Lq~~i~~~Kk~a~kg~K~~~Kk~rK~v~~e~~~le~el~~rh~~ 99 (337)
|.-.|.+.+...+..+|....|.. +.|+++...+.+|..+-.+=+.+
T Consensus 11 ~~eeEm~~~eeel~~lke~l~k~e-----~~rkele~~~~~l~~ek~~L~~q 57 (89)
T 3bas_A 11 RQEEEMKEQLKQMDKMKEDLAKTE-----RIKKELEEQNVTLLEQKNDLFGS 57 (89)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHHH
Confidence 445667777777777777776332 57889999988888887766655
Done!