Query 019672
Match_columns 337
No_of_seqs 298 out of 2982
Neff 9.8
Searched_HMMs 29240
Date Mon Mar 25 05:22:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019672.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019672hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vu4_A KMHSV2; beta-propeller 100.0 6.1E-42 2.1E-46 311.8 37.9 296 4-320 16-340 (355)
2 1got_B GT-beta; complex (GTP-b 100.0 1.9E-36 6.4E-41 273.7 37.8 274 4-313 52-340 (340)
3 3ow8_A WD repeat-containing pr 100.0 2.8E-36 9.5E-41 270.7 35.2 274 3-314 28-319 (321)
4 1vyh_C Platelet-activating fac 100.0 4.9E-37 1.7E-41 284.7 29.7 273 4-314 105-409 (410)
5 2pbi_B Guanine nucleotide-bind 100.0 5.9E-36 2E-40 272.1 33.7 276 4-313 61-354 (354)
6 4gqb_B Methylosome protein 50; 100.0 4E-36 1.4E-40 272.3 31.4 274 6-318 29-333 (344)
7 2ynn_A Coatomer subunit beta'; 100.0 2.6E-35 8.8E-40 262.1 35.0 236 4-256 10-262 (304)
8 1erj_A Transcriptional repress 100.0 1E-34 3.5E-39 267.5 37.0 280 5-317 62-390 (393)
9 4g56_B MGC81050 protein; prote 100.0 8.5E-36 2.9E-40 271.4 27.3 275 5-318 40-345 (357)
10 4ery_A WD repeat-containing pr 100.0 1.7E-33 5.9E-38 250.6 36.2 276 4-315 20-311 (312)
11 3iz6_a 40S ribosomal protein R 100.0 2.1E-35 7.3E-40 270.9 24.2 285 3-317 62-376 (380)
12 3frx_A Guanine nucleotide-bind 100.0 1.5E-33 5.3E-38 252.4 35.1 282 3-317 13-318 (319)
13 1nr0_A Actin interacting prote 100.0 8E-34 2.8E-38 276.1 35.3 278 4-314 187-609 (611)
14 4gqb_B Methylosome protein 50; 100.0 1E-33 3.6E-38 256.4 31.6 234 7-256 82-334 (344)
15 2xzm_R RACK1; ribosome, transl 100.0 8.5E-33 2.9E-37 249.9 36.8 289 3-316 17-340 (343)
16 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.6E-33 1.2E-37 252.8 34.1 287 4-318 12-337 (345)
17 1nr0_A Actin interacting prote 100.0 1.4E-33 4.9E-38 274.3 33.1 281 4-316 144-567 (611)
18 3ow8_A WD repeat-containing pr 100.0 5E-33 1.7E-37 249.5 30.8 232 4-252 77-320 (321)
19 4h5i_A Guanine nucleotide-exch 100.0 8.5E-33 2.9E-37 252.4 32.1 193 50-254 137-344 (365)
20 4g56_B MGC81050 protein; prote 100.0 3.9E-33 1.3E-37 253.8 28.9 236 5-256 92-346 (357)
21 3zwl_B Eukaryotic translation 100.0 7E-32 2.4E-36 244.0 36.2 278 3-317 28-347 (369)
22 4aow_A Guanine nucleotide-bind 100.0 8.6E-32 2.9E-36 241.4 34.5 285 3-316 34-337 (340)
23 1vyh_C Platelet-activating fac 100.0 3E-32 1E-36 252.5 31.1 232 4-252 147-410 (410)
24 1got_B GT-beta; complex (GTP-b 100.0 3.2E-32 1.1E-36 245.9 30.2 228 5-250 95-340 (340)
25 1gxr_A ESG1, transducin-like e 100.0 6.9E-31 2.4E-35 234.8 37.4 271 5-315 49-336 (337)
26 3frx_A Guanine nucleotide-bind 100.0 8E-32 2.7E-36 241.3 30.8 233 4-253 62-317 (319)
27 3k26_A Polycomb protein EED; W 100.0 1.4E-31 4.9E-36 241.9 32.1 280 4-315 15-365 (366)
28 2pm7_B Protein transport prote 100.0 1.6E-31 5.3E-36 236.9 29.5 236 3-253 5-285 (297)
29 2hes_X YDR267CP; beta-propelle 100.0 4.9E-31 1.7E-35 237.2 33.2 276 4-316 11-328 (330)
30 2pbi_B Guanine nucleotide-bind 100.0 9E-31 3.1E-35 237.9 34.5 228 6-250 105-354 (354)
31 1sq9_A Antiviral protein SKI8; 100.0 1.1E-31 3.8E-36 246.1 27.7 238 3-256 12-325 (397)
32 2ymu_A WD-40 repeat protein; u 100.0 7.4E-31 2.5E-35 252.4 34.3 268 4-313 300-577 (577)
33 1r5m_A SIR4-interacting protei 100.0 3.8E-31 1.3E-35 243.7 29.9 288 6-315 107-424 (425)
34 1erj_A Transcriptional repress 100.0 1.2E-30 4.2E-35 240.2 33.1 230 9-253 125-389 (393)
35 3gre_A Serine/threonine-protei 100.0 5E-32 1.7E-36 252.2 23.7 240 4-257 60-363 (437)
36 3i2n_A WD repeat-containing pr 100.0 4.6E-31 1.6E-35 238.0 28.7 299 4-316 15-353 (357)
37 2pm9_A Protein WEB1, protein t 100.0 4.4E-32 1.5E-36 250.1 22.1 298 5-317 65-415 (416)
38 3ei3_B DNA damage-binding prot 100.0 8E-31 2.7E-35 239.9 30.3 274 4-316 70-382 (383)
39 3dm0_A Maltose-binding peripla 100.0 1.8E-30 6.3E-35 256.0 34.3 293 4-315 379-692 (694)
40 2ynn_A Coatomer subunit beta'; 100.0 2.5E-30 8.6E-35 229.9 30.5 240 41-317 8-260 (304)
41 1k8k_C P40, ARP2/3 complex 41 100.0 2.9E-30 9.9E-35 234.2 30.8 232 5-253 6-274 (372)
42 4a11_B DNA excision repair pro 100.0 4.4E-30 1.5E-34 235.5 31.9 237 4-257 40-369 (408)
43 2j04_B YDR362CP, TAU91; beta p 100.0 4.5E-31 1.5E-35 251.4 24.6 294 7-318 133-519 (524)
44 3iz6_a 40S ribosomal protein R 100.0 4.5E-31 1.5E-35 242.1 23.5 236 5-254 106-376 (380)
45 3vl1_A 26S proteasome regulato 100.0 4.4E-30 1.5E-34 237.4 30.3 280 9-315 99-418 (420)
46 3odt_A Protein DOA1; ubiquitin 100.0 2.3E-29 7.9E-34 222.7 33.7 274 3-320 14-300 (313)
47 3vl1_A 26S proteasome regulato 100.0 4.9E-31 1.7E-35 243.8 23.5 274 9-317 58-366 (420)
48 3dw8_B Serine/threonine-protei 100.0 2.1E-30 7.1E-35 241.3 27.8 237 6-256 27-376 (447)
49 2xzm_R RACK1; ribosome, transl 100.0 1.6E-29 5.5E-34 228.4 32.5 233 4-254 73-341 (343)
50 3fm0_A Protein CIAO1; WDR39,SG 100.0 8.6E-30 2.9E-34 230.5 30.6 240 4-257 58-339 (345)
51 4aez_A CDC20, WD repeat-contai 100.0 2.8E-29 9.6E-34 231.5 34.1 273 10-320 96-384 (401)
52 1p22_A F-BOX/WD-repeat protein 100.0 1.4E-29 4.6E-34 236.1 31.5 276 5-319 131-417 (435)
53 4gga_A P55CDC, cell division c 100.0 4.8E-29 1.7E-33 231.4 34.9 269 9-317 107-396 (420)
54 4gga_A P55CDC, cell division c 100.0 3.5E-29 1.2E-33 232.3 33.2 238 4-256 144-398 (420)
55 1yfq_A Cell cycle arrest prote 100.0 1.3E-29 4.3E-34 227.6 29.3 269 4-313 8-321 (342)
56 1pgu_A Actin interacting prote 100.0 1.4E-28 4.6E-33 237.8 37.9 279 4-317 157-615 (615)
57 3jrp_A Fusion protein of prote 100.0 9.8E-30 3.3E-34 230.9 27.8 239 3-254 7-288 (379)
58 2ymu_A WD-40 repeat protein; u 100.0 3.8E-29 1.3E-33 240.5 33.3 268 4-314 259-537 (577)
59 4ery_A WD repeat-containing pr 100.0 1.4E-28 4.9E-33 218.7 34.1 233 4-252 62-311 (312)
60 1r5m_A SIR4-interacting protei 100.0 2.3E-29 7.9E-34 231.7 29.8 274 6-318 44-363 (425)
61 3bg1_A Protein SEC13 homolog; 100.0 4.6E-30 1.6E-34 229.5 24.1 234 3-253 9-293 (316)
62 2hes_X YDR267CP; beta-propelle 100.0 1.6E-29 5.6E-34 227.3 27.8 232 6-253 57-328 (330)
63 4ggc_A P55CDC, cell division c 100.0 2.9E-28 1E-32 216.3 35.4 266 10-315 28-314 (318)
64 3dwl_C Actin-related protein 2 100.0 5.5E-31 1.9E-35 240.2 17.2 230 6-252 10-280 (377)
65 4e54_B DNA damage-binding prot 100.0 8.7E-30 3E-34 237.6 25.1 278 5-318 117-432 (435)
66 4aez_A CDC20, WD repeat-contai 100.0 1.1E-28 3.7E-33 227.6 31.8 239 6-257 133-384 (401)
67 3sfz_A APAF-1, apoptotic pepti 100.0 1.5E-28 5.2E-33 256.5 36.2 297 4-317 612-993 (1249)
68 2ovr_B FBW7, F-BOX/WD repeat p 100.0 4.5E-28 1.5E-32 226.3 35.3 275 4-317 156-443 (445)
69 3f3f_A Nucleoporin SEH1; struc 100.0 1E-28 3.6E-33 220.7 29.5 238 4-256 8-340 (351)
70 3mkq_A Coatomer beta'-subunit; 100.0 1.5E-28 5E-33 245.7 33.7 235 4-255 10-261 (814)
71 3v7d_B Cell division control p 100.0 1.9E-28 6.3E-33 229.8 32.2 268 5-317 119-422 (464)
72 2pm7_B Protein transport prote 100.0 2.9E-28 1E-32 215.8 30.7 248 46-330 9-295 (297)
73 1gxr_A ESG1, transducin-like e 100.0 9.8E-28 3.4E-32 214.2 34.3 228 5-251 95-335 (337)
74 2pm9_A Protein WEB1, protein t 100.0 1.4E-29 4.8E-34 233.4 22.5 277 8-319 13-340 (416)
75 3dm0_A Maltose-binding peripla 100.0 3.2E-28 1.1E-32 240.0 32.9 232 4-252 427-692 (694)
76 4aow_A Guanine nucleotide-bind 100.0 1.7E-27 5.9E-32 213.3 33.9 236 4-255 83-339 (340)
77 3mmy_A MRNA export factor; mRN 100.0 4.1E-28 1.4E-32 219.2 29.9 278 3-319 35-349 (368)
78 2ovr_B FBW7, F-BOX/WD repeat p 100.0 8.2E-28 2.8E-32 224.5 32.7 268 5-317 116-392 (445)
79 3k26_A Polycomb protein EED; W 100.0 6.3E-29 2.2E-33 224.5 24.2 233 5-252 67-365 (366)
80 3v7d_B Cell division control p 100.0 2.6E-27 8.8E-32 222.0 35.8 232 4-256 159-424 (464)
81 2oaj_A Protein SNI1; WD40 repe 100.0 1.4E-27 4.9E-32 241.3 36.0 233 5-251 15-310 (902)
82 2oaj_A Protein SNI1; WD40 repe 100.0 2E-27 6.9E-32 240.2 36.8 293 4-320 148-665 (902)
83 1sq9_A Antiviral protein SKI8; 100.0 2.3E-28 8E-33 223.9 27.1 237 5-254 60-396 (397)
84 4ggc_A P55CDC, cell division c 100.0 2.6E-27 8.7E-32 210.2 32.7 236 4-253 64-315 (318)
85 3lrv_A PRE-mRNA-splicing facto 100.0 3.5E-28 1.2E-32 219.5 27.2 257 15-314 44-331 (343)
86 2vdu_B TRNA (guanine-N(7)-)-me 100.0 1.3E-27 4.4E-32 223.8 31.8 230 7-251 4-337 (450)
87 1pgu_A Actin interacting prote 100.0 6.9E-28 2.4E-32 232.8 30.4 234 5-256 16-286 (615)
88 3bg1_A Protein SEC13 homolog; 100.0 9.4E-28 3.2E-32 214.5 27.5 239 45-317 12-294 (316)
89 3sfz_A APAF-1, apoptotic pepti 100.0 2.8E-29 9.6E-34 262.0 20.1 271 6-314 960-1247(1249)
90 3zwl_B Eukaryotic translation 100.0 7.7E-27 2.6E-31 210.8 31.0 241 4-255 71-348 (369)
91 3ei3_B DNA damage-binding prot 100.0 3.6E-27 1.2E-31 215.5 29.1 228 5-253 116-382 (383)
92 3gre_A Serine/threonine-protei 100.0 2.5E-27 8.6E-32 220.4 27.9 231 5-250 109-437 (437)
93 3i2n_A WD repeat-containing pr 100.0 2.3E-27 7.8E-32 213.7 25.5 232 5-254 63-354 (357)
94 3mkq_A Coatomer beta'-subunit; 100.0 4.6E-26 1.6E-30 227.7 36.2 237 5-255 53-304 (814)
95 3mmy_A MRNA export factor; mRN 100.0 1.2E-26 4.1E-31 209.5 27.8 235 5-254 84-347 (368)
96 3odt_A Protein DOA1; ubiquitin 100.0 6.7E-26 2.3E-30 200.4 30.9 229 5-256 57-299 (313)
97 3jro_A Fusion protein of prote 100.0 1.9E-27 6.5E-32 236.6 22.6 240 3-255 5-287 (753)
98 3jrp_A Fusion protein of prote 100.0 4.2E-26 1.4E-30 206.9 29.5 242 43-317 8-288 (379)
99 1p22_A F-BOX/WD-repeat protein 100.0 1.5E-26 5.2E-31 215.5 26.6 228 4-256 170-417 (435)
100 1yfq_A Cell cycle arrest prote 100.0 1.7E-26 5.7E-31 207.2 25.6 230 5-251 54-322 (342)
101 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-27 5E-32 227.2 19.6 238 6-254 206-518 (524)
102 2w18_A PALB2, fancn, partner a 100.0 5.6E-26 1.9E-30 201.4 27.7 234 10-251 42-355 (356)
103 2aq5_A Coronin-1A; WD40 repeat 100.0 1.7E-26 5.8E-31 212.8 25.4 236 4-255 78-344 (402)
104 4a11_B DNA excision repair pro 100.0 1.7E-25 5.7E-30 205.0 30.9 276 30-319 25-368 (408)
105 2aq5_A Coronin-1A; WD40 repeat 100.0 2.1E-26 7.1E-31 212.2 24.6 233 9-255 36-301 (402)
106 4e54_B DNA damage-binding prot 100.0 4.4E-27 1.5E-31 219.3 20.0 238 4-256 161-433 (435)
107 1k8k_C P40, ARP2/3 complex 41 99.9 7.5E-26 2.6E-30 205.1 26.6 238 42-316 4-274 (372)
108 1l0q_A Surface layer protein; 99.9 3.3E-24 1.1E-28 196.2 37.7 233 7-256 31-278 (391)
109 3lrv_A PRE-mRNA-splicing facto 99.9 5.9E-26 2E-30 204.9 24.6 219 73-318 56-294 (343)
110 3f3f_A Nucleoporin SEH1; struc 99.9 5.7E-25 2E-29 196.3 30.5 257 45-318 10-339 (351)
111 1l0q_A Surface layer protein; 99.9 3.7E-24 1.3E-28 195.8 33.5 258 20-316 3-275 (391)
112 4h5i_A Guanine nucleotide-exch 99.9 5.3E-25 1.8E-29 200.7 27.6 276 7-319 14-346 (365)
113 3dw8_B Serine/threonine-protei 99.9 8E-25 2.7E-29 203.5 29.2 248 47-317 29-374 (447)
114 3dwl_C Actin-related protein 2 99.9 1.2E-26 3.9E-31 211.5 16.4 235 3-251 51-377 (377)
115 3bws_A Protein LP49; two-domai 99.9 1.1E-24 3.7E-29 202.1 29.6 269 8-315 123-431 (433)
116 2xyi_A Probable histone-bindin 99.9 1.1E-25 3.9E-30 209.5 22.7 235 5-254 126-411 (430)
117 2xyi_A Probable histone-bindin 99.9 1.6E-24 5.4E-29 201.7 28.3 249 47-317 129-411 (430)
118 2j04_A TAU60, YPL007P, hypothe 99.9 3.1E-26 1.1E-30 215.3 14.2 256 7-315 15-296 (588)
119 2vdu_B TRNA (guanine-N(7)-)-me 99.9 4.4E-24 1.5E-28 199.8 28.5 250 47-314 5-337 (450)
120 3bws_A Protein LP49; two-domai 99.9 1.6E-23 5.5E-28 194.2 31.8 231 5-252 167-431 (433)
121 3jro_A Fusion protein of prote 99.9 1.9E-24 6.5E-29 214.9 24.2 239 45-316 8-285 (753)
122 3vu4_A KMHSV2; beta-propeller 99.9 6.7E-24 2.3E-28 192.6 25.3 229 9-256 60-339 (355)
123 2w18_A PALB2, fancn, partner a 99.9 2.9E-23 9.9E-28 184.1 23.9 212 74-314 62-355 (356)
124 4gq1_A NUP37; propeller, trans 99.9 1.2E-23 4E-28 193.6 21.4 225 12-252 94-388 (393)
125 4gq1_A NUP37; propeller, trans 99.9 4E-23 1.4E-27 190.1 24.1 210 73-314 109-387 (393)
126 2j04_A TAU60, YPL007P, hypothe 99.9 5.4E-22 1.8E-26 186.6 28.0 217 5-242 83-350 (588)
127 1nir_A Nitrite reductase; hemo 99.9 7.3E-21 2.5E-25 182.1 29.2 280 14-320 144-462 (543)
128 1nir_A Nitrite reductase; hemo 99.9 7.4E-20 2.5E-24 175.1 30.5 276 9-316 180-514 (543)
129 2hqs_A Protein TOLB; TOLB, PAL 99.9 3.3E-20 1.1E-24 171.9 26.3 235 8-255 63-346 (415)
130 3vgz_A Uncharacterized protein 99.9 9.6E-19 3.3E-23 157.1 34.4 231 8-255 41-305 (353)
131 3u4y_A Uncharacterized protein 99.9 2.8E-19 9.7E-24 159.6 28.6 273 13-317 3-305 (331)
132 3u4y_A Uncharacterized protein 99.9 4.3E-19 1.5E-23 158.4 28.0 234 7-254 40-305 (331)
133 2ecf_A Dipeptidyl peptidase IV 99.8 1.4E-19 4.7E-24 179.3 24.5 231 7-253 36-367 (741)
134 1pby_B Quinohemoprotein amine 99.8 5.9E-19 2E-23 157.2 25.0 235 9-256 35-313 (337)
135 1ri6_A Putative isomerase YBHE 99.8 3.1E-18 1E-22 153.0 29.6 267 22-320 8-312 (343)
136 1pby_B Quinohemoprotein amine 99.8 6.3E-19 2.1E-23 157.1 23.8 256 20-316 2-310 (337)
137 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.5E-18 2.6E-22 156.0 31.7 221 19-254 143-388 (415)
138 1ri6_A Putative isomerase YBHE 99.8 1.8E-18 6.2E-23 154.4 25.8 232 6-252 36-307 (343)
139 1jmx_B Amine dehydrogenase; ox 99.8 6.8E-19 2.3E-23 157.7 22.6 225 12-256 4-328 (349)
140 1xfd_A DIP, dipeptidyl aminope 99.8 5.1E-19 1.8E-23 174.6 20.3 238 8-250 17-341 (723)
141 2z3z_A Dipeptidyl aminopeptida 99.8 1.7E-18 5.7E-23 170.6 22.9 229 9-252 27-341 (706)
142 3vgz_A Uncharacterized protein 99.8 3.5E-17 1.2E-21 146.9 28.4 223 9-244 90-335 (353)
143 2z3z_A Dipeptidyl aminopeptida 99.8 7.5E-18 2.6E-22 165.9 25.8 232 8-254 82-392 (706)
144 3hfq_A Uncharacterized protein 99.8 3.9E-17 1.3E-21 146.9 26.7 232 8-253 40-317 (347)
145 2ojh_A Uncharacterized protein 99.8 5.6E-18 1.9E-22 147.5 19.6 228 6-244 40-293 (297)
146 3hfq_A Uncharacterized protein 99.8 4.2E-16 1.4E-20 140.1 32.0 266 28-321 16-322 (347)
147 2oit_A Nucleoporin 214KDA; NH2 99.8 5.7E-18 1.9E-22 157.7 19.7 158 91-255 89-280 (434)
148 3scy_A Hypothetical bacterial 99.8 7.1E-17 2.4E-21 146.0 26.5 229 8-253 50-337 (361)
149 3o4h_A Acylamino-acid-releasin 99.8 2.5E-18 8.6E-23 165.8 17.8 225 8-251 22-274 (582)
150 2ecf_A Dipeptidyl peptidase IV 99.8 1.6E-17 5.6E-22 164.4 23.1 229 9-253 110-413 (741)
151 2ojh_A Uncharacterized protein 99.8 1.1E-16 3.9E-21 139.2 24.6 208 29-255 23-260 (297)
152 1jof_A Carboxy-CIS,CIS-muconat 99.8 8.9E-17 3E-21 146.0 23.7 243 8-254 40-342 (365)
153 1jmx_B Amine dehydrogenase; ox 99.8 8.3E-17 2.8E-21 144.1 22.7 213 73-316 19-325 (349)
154 3scy_A Hypothetical bacterial 99.8 2.9E-15 9.8E-20 135.5 32.4 279 16-320 10-341 (361)
155 1k32_A Tricorn protease; prote 99.8 3E-16 1E-20 161.3 27.6 229 5-255 201-463 (1045)
156 1k32_A Tricorn protease; prote 99.7 5.9E-16 2E-20 159.1 27.5 223 9-252 246-501 (1045)
157 2oit_A Nucleoporin 214KDA; NH2 99.7 1.7E-16 5.9E-21 147.7 20.8 164 75-252 23-222 (434)
158 1z68_A Fibroblast activation p 99.7 5.2E-17 1.8E-21 160.3 17.3 237 12-253 20-346 (719)
159 1q7f_A NHL, brain tumor CG1071 99.7 3.4E-14 1.1E-18 124.1 32.6 232 6-253 28-280 (286)
160 1xfd_A DIP, dipeptidyl aminope 99.7 6E-16 2.1E-20 152.6 23.8 234 9-255 62-395 (723)
161 3pe7_A Oligogalacturonate lyas 99.7 2.4E-15 8.2E-20 137.0 25.0 281 13-319 41-385 (388)
162 3o4h_A Acylamino-acid-releasin 99.7 5.3E-16 1.8E-20 149.5 21.6 192 47-256 22-230 (582)
163 1jof_A Carboxy-CIS,CIS-muconat 99.7 2.5E-14 8.4E-19 129.8 27.3 267 22-317 5-342 (365)
164 3fvz_A Peptidyl-glycine alpha- 99.7 7.2E-14 2.5E-18 125.0 27.3 234 7-255 23-324 (329)
165 4a5s_A Dipeptidyl peptidase 4 99.7 3E-15 1E-19 148.5 20.1 240 9-254 18-354 (740)
166 3c5m_A Oligogalacturonate lyas 99.7 4.6E-14 1.6E-18 128.5 25.1 282 10-320 38-386 (396)
167 2oiz_A Aromatic amine dehydrog 99.6 9.7E-14 3.3E-18 125.9 22.8 223 12-254 54-335 (361)
168 3dsm_A Uncharacterized protein 99.6 1.5E-12 5.3E-17 116.3 29.0 225 9-252 45-301 (328)
169 3dsm_A Uncharacterized protein 99.6 1.3E-12 4.4E-17 116.8 27.4 209 28-255 17-255 (328)
170 1z68_A Fibroblast activation p 99.6 7E-14 2.4E-18 137.9 18.9 169 73-250 34-284 (719)
171 3pe7_A Oligogalacturonate lyas 99.5 5.2E-13 1.8E-17 121.4 21.0 239 9-253 82-382 (388)
172 2gop_A Trilobed protease; beta 99.5 5.3E-12 1.8E-16 113.0 26.5 223 9-252 60-330 (347)
173 4a5s_A Dipeptidyl peptidase 4 99.5 2.7E-12 9.3E-17 127.2 25.4 173 74-255 35-296 (740)
174 1qks_A Cytochrome CD1 nitrite 99.5 5.7E-11 2E-15 113.7 33.4 230 16-255 164-423 (567)
175 1q7f_A NHL, brain tumor CG1071 99.5 2.3E-11 8E-16 105.9 28.3 170 73-252 49-237 (286)
176 3fvz_A Peptidyl-glycine alpha- 99.5 8.1E-12 2.8E-16 111.6 25.3 219 75-317 69-323 (329)
177 2dg1_A DRP35, lactonase; beta 99.5 1.4E-11 4.9E-16 109.7 25.0 232 7-252 5-262 (333)
178 3c5m_A Oligogalacturonate lyas 99.5 5.1E-12 1.7E-16 114.8 21.7 232 12-252 85-381 (396)
179 3azo_A Aminopeptidase; POP fam 99.5 8.6E-12 2.9E-16 121.7 23.3 232 6-252 22-322 (662)
180 2z2n_A Virginiamycin B lyase; 99.5 1.1E-09 3.9E-14 95.2 34.5 227 5-252 12-254 (299)
181 1rwi_B Serine/threonine-protei 99.4 1.7E-11 5.8E-16 105.7 21.7 229 9-256 25-267 (270)
182 3no2_A Uncharacterized protein 99.4 3.9E-11 1.3E-15 104.6 23.9 172 73-256 13-198 (276)
183 3e5z_A Putative gluconolactona 99.4 7.8E-11 2.7E-15 103.2 25.5 214 8-244 28-278 (296)
184 2mad_H Methylamine dehydrogena 99.4 4E-10 1.4E-14 102.5 30.3 228 12-257 70-354 (373)
185 3azo_A Aminopeptidase; POP fam 99.4 1.4E-11 4.8E-16 120.2 21.4 242 54-319 29-326 (662)
186 2xdw_A Prolyl endopeptidase; a 99.4 8.7E-11 3E-15 115.8 27.1 239 9-255 126-416 (710)
187 2dg1_A DRP35, lactonase; beta 99.4 3.4E-10 1.1E-14 100.7 27.7 225 7-243 44-300 (333)
188 2oiz_A Aromatic amine dehydrog 99.4 5E-11 1.7E-15 108.0 22.0 265 17-315 13-333 (361)
189 3sjl_D Methylamine dehydrogena 99.4 3.1E-10 1.1E-14 102.8 26.4 230 12-256 82-366 (386)
190 3no2_A Uncharacterized protein 99.4 2.7E-10 9.1E-15 99.3 24.6 219 18-254 4-252 (276)
191 1pjx_A Dfpase, DIISOPROPYLFLUO 99.3 2E-09 6.9E-14 94.5 28.7 227 9-254 19-300 (314)
192 2gop_A Trilobed protease; beta 99.3 5.2E-10 1.8E-14 99.9 24.5 218 8-252 15-290 (347)
193 1qks_A Cytochrome CD1 nitrite 99.3 8.4E-10 2.9E-14 105.7 27.2 172 73-255 175-375 (567)
194 2bkl_A Prolyl endopeptidase; m 99.3 8.6E-11 2.9E-15 115.6 18.3 237 8-255 121-399 (695)
195 3e5z_A Putative gluconolactona 99.3 3.8E-09 1.3E-13 92.3 26.3 187 49-252 30-245 (296)
196 2xdw_A Prolyl endopeptidase; a 99.3 3.1E-09 1.1E-13 104.7 28.5 232 17-254 81-369 (710)
197 1xip_A Nucleoporin NUP159; bet 99.3 3.5E-10 1.2E-14 102.7 19.3 174 48-242 39-233 (388)
198 2qc5_A Streptogramin B lactona 99.3 1.1E-07 3.8E-12 82.5 34.8 226 6-252 18-259 (300)
199 2z2n_A Virginiamycin B lyase; 99.3 2.8E-08 9.7E-13 86.2 30.8 224 7-253 56-295 (299)
200 3hrp_A Uncharacterized protein 99.2 1.1E-08 3.6E-13 94.2 28.6 234 8-252 131-409 (409)
201 1yr2_A Prolyl oligopeptidase; 99.2 4.1E-09 1.4E-13 104.4 27.4 236 9-255 164-443 (741)
202 1xip_A Nucleoporin NUP159; bet 99.2 3.9E-09 1.4E-13 95.8 23.7 222 7-250 37-309 (388)
203 3c75_H MADH, methylamine dehyd 99.2 3.8E-09 1.3E-13 97.2 23.7 231 12-257 122-406 (426)
204 2mad_H Methylamine dehydrogena 99.2 4E-08 1.4E-12 89.3 30.3 268 14-316 27-350 (373)
205 3g4e_A Regucalcin; six bladed 99.2 1.6E-08 5.4E-13 88.7 26.7 214 10-242 15-261 (297)
206 3q7m_A Lipoprotein YFGL, BAMB; 99.2 6.5E-09 2.2E-13 94.2 24.7 256 18-313 102-375 (376)
207 1rwi_B Serine/threonine-protei 99.2 3.6E-09 1.2E-13 90.9 21.9 216 73-319 44-267 (270)
208 2bkl_A Prolyl endopeptidase; m 99.2 7.3E-09 2.5E-13 101.8 25.0 229 16-252 76-348 (695)
209 2hz6_A Endoplasmic reticulum t 99.1 5.7E-12 2E-16 114.6 0.0 257 18-317 8-280 (369)
210 3q7m_A Lipoprotein YFGL, BAMB; 99.1 1.2E-07 4E-12 85.8 28.2 217 19-256 53-299 (376)
211 2qe8_A Uncharacterized protein 99.1 1.2E-08 4.2E-13 91.4 21.4 235 8-250 17-318 (343)
212 1mda_H Methylamine dehydrogena 99.1 1.9E-09 6.5E-14 97.5 15.9 222 12-257 69-350 (368)
213 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 1.4E-07 4.9E-12 82.5 27.7 172 73-254 44-257 (314)
214 3g4e_A Regucalcin; six bladed 99.1 4.5E-07 1.5E-11 79.3 30.6 190 54-255 20-231 (297)
215 3iuj_A Prolyl endopeptidase; h 99.1 3.4E-08 1.2E-12 97.0 25.3 238 7-255 128-407 (693)
216 3c75_H MADH, methylamine dehyd 99.1 2E-08 6.7E-13 92.4 21.9 267 17-316 82-402 (426)
217 2ghs_A AGR_C_1268P; regucalcin 99.1 3.3E-07 1.1E-11 81.5 29.0 212 10-243 51-292 (326)
218 3sjl_D Methylamine dehydrogena 99.1 3.2E-08 1.1E-12 89.6 22.4 269 12-314 37-361 (386)
219 2ece_A 462AA long hypothetical 99.1 7.5E-07 2.6E-11 81.5 31.2 219 28-254 43-353 (462)
220 2qc5_A Streptogramin B lactona 99.1 2.6E-07 8.7E-12 80.2 27.4 222 7-251 61-298 (300)
221 1kb0_A Quinohemoprotein alcoho 99.1 1E-08 3.5E-13 100.4 20.2 185 20-214 78-354 (677)
222 1kb0_A Quinohemoprotein alcoho 99.1 3.7E-08 1.3E-12 96.4 23.9 229 18-256 127-510 (677)
223 3dr2_A Exported gluconolactona 99.1 7.1E-08 2.4E-12 84.8 23.4 217 9-247 46-301 (305)
224 2iwa_A Glutamine cyclotransfer 99.0 1.6E-07 5.4E-12 80.7 24.7 171 74-254 43-238 (266)
225 3nok_A Glutaminyl cyclase; bet 99.0 4.3E-08 1.5E-12 83.4 20.0 169 55-242 61-254 (268)
226 3nol_A Glutamine cyclotransfer 99.0 1.7E-07 5.9E-12 79.7 23.2 164 75-251 65-252 (262)
227 2ece_A 462AA long hypothetical 99.0 1.4E-07 4.9E-12 86.3 23.9 221 16-241 90-399 (462)
228 3mbr_X Glutamine cyclotransfer 99.0 4.2E-07 1.4E-11 76.6 24.4 180 55-251 27-231 (243)
229 1yiq_A Quinohemoprotein alcoho 99.0 5.4E-08 1.8E-12 95.5 20.8 185 19-213 70-345 (689)
230 2iwa_A Glutamine cyclotransfer 99.0 4.7E-07 1.6E-11 77.7 24.0 186 10-206 23-237 (266)
231 1yr2_A Prolyl oligopeptidase; 99.0 1.9E-07 6.5E-12 92.4 24.7 229 16-252 115-392 (741)
232 2ghs_A AGR_C_1268P; regucalcin 98.9 5.3E-06 1.8E-10 73.5 29.8 185 53-252 55-259 (326)
233 2hz6_A Endoplasmic reticulum t 98.8 1.1E-09 3.8E-14 99.4 3.9 170 73-255 17-194 (369)
234 3hxj_A Pyrrolo-quinoline quino 98.8 6.6E-08 2.3E-12 85.4 13.0 212 12-251 24-242 (330)
235 3nol_A Glutamine cyclotransfer 98.8 1.8E-06 6.1E-11 73.5 20.6 177 10-196 45-246 (262)
236 1yiq_A Quinohemoprotein alcoho 98.7 1.1E-06 3.8E-11 86.1 21.0 227 19-256 121-508 (689)
237 3iuj_A Prolyl endopeptidase; h 98.6 5.9E-06 2E-10 81.1 23.1 194 49-253 131-359 (693)
238 3hrp_A Uncharacterized protein 98.6 2.4E-05 8.2E-10 71.7 25.3 172 73-254 150-355 (409)
239 1kv9_A Type II quinohemoprotei 98.6 4.2E-06 1.4E-10 81.7 20.9 184 20-213 67-340 (668)
240 3nok_A Glutaminyl cyclase; bet 98.6 2.9E-06 9.8E-11 72.2 17.1 161 86-256 44-213 (268)
241 1mda_H Methylamine dehydrogena 98.6 2.3E-06 8E-11 77.2 17.6 247 29-316 47-346 (368)
242 2ad6_A Methanol dehydrogenase 98.6 1.1E-05 3.7E-10 77.3 23.0 186 21-215 64-344 (571)
243 1fwx_A Nitrous oxide reductase 98.6 5.2E-06 1.8E-10 78.6 20.0 172 73-253 110-361 (595)
244 3hxj_A Pyrrolo-quinoline quino 98.6 2.1E-06 7.1E-11 75.6 16.7 212 19-255 107-326 (330)
245 2ad6_A Methanol dehydrogenase 98.6 5.5E-06 1.9E-10 79.4 20.5 227 19-256 115-497 (571)
246 3dr2_A Exported gluconolactona 98.6 3.2E-05 1.1E-09 67.7 23.3 185 52-252 50-266 (305)
247 3mbr_X Glutamine cyclotransfer 98.5 1.7E-05 5.9E-10 66.7 19.4 162 86-256 10-182 (243)
248 1npe_A Nidogen, entactin; glyc 98.5 0.00037 1.3E-08 59.4 30.3 223 19-256 1-241 (267)
249 1fwx_A Nitrous oxide reductase 98.5 2.9E-05 9.9E-10 73.5 21.6 231 17-255 99-433 (595)
250 2fp8_A Strictosidine synthase; 98.4 0.00014 4.8E-09 64.0 24.7 226 10-254 21-314 (322)
251 1w6s_A Methanol dehydrogenase 98.4 4.4E-05 1.5E-09 73.3 22.6 187 20-214 63-350 (599)
252 2qe8_A Uncharacterized protein 98.4 7.9E-06 2.7E-10 73.0 16.0 155 95-252 67-277 (343)
253 2p4o_A Hypothetical protein; p 98.4 0.00087 3E-08 58.5 31.2 221 8-244 32-279 (306)
254 1flg_A Protein (quinoprotein e 98.4 0.00012 4.2E-09 70.2 24.2 189 18-215 68-364 (582)
255 4a2l_A BT_4663, two-component 98.3 0.0016 5.6E-08 64.7 30.0 226 7-253 356-614 (795)
256 4a2l_A BT_4663, two-component 98.2 0.001 3.4E-08 66.2 28.2 229 10-254 175-437 (795)
257 3v9f_A Two-component system se 98.2 0.0035 1.2E-07 62.2 31.6 231 6-254 311-569 (781)
258 3amr_A 3-phytase; beta-propell 98.2 0.00059 2E-08 60.4 23.0 172 74-252 49-262 (355)
259 1npe_A Nidogen, entactin; glyc 98.2 0.0018 6.3E-08 55.0 28.8 211 10-232 38-263 (267)
260 1w6s_A Methanol dehydrogenase 98.2 0.00018 6E-09 69.2 21.0 224 22-256 124-506 (599)
261 3v9f_A Two-component system se 98.1 0.0047 1.6E-07 61.2 29.4 229 7-254 210-479 (781)
262 2xzh_A Clathrin heavy chain 1; 98.0 0.0052 1.8E-07 53.7 30.9 254 30-317 51-333 (365)
263 1flg_A Protein (quinoprotein e 98.0 0.0016 5.6E-08 62.3 23.9 229 19-256 117-519 (582)
264 1bpo_A Protein (clathrin); cla 98.0 0.0081 2.8E-07 54.5 29.1 255 29-317 49-332 (494)
265 1kv9_A Type II quinohemoprotei 98.0 0.00029 1E-08 68.7 17.9 181 74-256 75-336 (668)
266 3amr_A 3-phytase; beta-propell 97.9 0.0048 1.6E-07 54.7 22.3 185 18-214 39-272 (355)
267 4hw6_A Hypothetical protein, I 97.8 0.022 7.6E-07 52.3 25.9 232 10-252 141-432 (433)
268 3v65_B Low-density lipoprotein 97.8 0.022 7.6E-07 51.4 30.3 230 11-255 80-320 (386)
269 2xe4_A Oligopeptidase B; hydro 97.7 0.00088 3E-08 66.3 15.5 114 137-254 175-305 (751)
270 2fp8_A Strictosidine synthase; 97.6 0.016 5.4E-07 50.7 21.6 170 73-251 38-267 (322)
271 3tc9_A Hypothetical hydrolase; 97.6 0.039 1.3E-06 50.5 26.1 234 9-252 138-429 (430)
272 3pbp_A Nucleoporin NUP82; beta 97.6 0.0043 1.5E-07 56.2 17.4 141 102-249 30-208 (452)
273 3v65_B Low-density lipoprotein 97.6 0.038 1.3E-06 49.8 24.9 171 74-253 95-277 (386)
274 2xe4_A Oligopeptidase B; hydro 97.5 0.015 5.3E-07 57.3 22.2 238 9-254 175-459 (751)
275 3p5b_L Low density lipoprotein 97.5 0.054 1.8E-06 49.1 31.5 224 20-256 84-323 (400)
276 3v64_C Agrin; beta propeller, 97.5 0.048 1.6E-06 48.4 32.6 231 9-255 35-277 (349)
277 2p4o_A Hypothetical protein; p 97.5 0.023 7.8E-07 49.3 20.5 168 73-252 51-241 (306)
278 3qqz_A Putative uncharacterize 97.5 0.04 1.4E-06 46.7 25.2 191 47-250 27-250 (255)
279 1ijq_A LDL receptor, low-densi 97.4 0.056 1.9E-06 47.2 31.7 223 21-256 3-241 (316)
280 1ijq_A LDL receptor, low-densi 97.4 0.065 2.2E-06 46.8 26.4 171 74-253 9-195 (316)
281 1k3i_A Galactose oxidase precu 97.3 0.014 4.9E-07 56.5 18.9 233 12-254 190-498 (656)
282 3kya_A Putative phosphatase; s 97.3 0.11 3.7E-06 48.4 25.7 240 9-256 140-478 (496)
283 3v64_C Agrin; beta propeller, 97.3 0.083 2.8E-06 46.8 26.8 171 74-253 52-234 (349)
284 3tc9_A Hypothetical hydrolase; 97.2 0.026 8.7E-07 51.8 18.3 149 97-253 139-301 (430)
285 1k3i_A Galactose oxidase precu 97.2 0.015 5.2E-07 56.4 17.5 225 12-242 247-530 (656)
286 2xbg_A YCF48-like protein; pho 97.2 0.1 3.5E-06 45.8 28.3 221 6-246 34-272 (327)
287 3qqz_A Putative uncharacterize 97.2 0.084 2.9E-06 44.6 22.2 153 95-254 27-205 (255)
288 1xi4_A Clathrin heavy chain; a 97.2 0.055 1.9E-06 56.2 21.3 215 30-256 50-292 (1630)
289 2p9w_A MAL S 1 allergenic prot 97.1 0.044 1.5E-06 48.0 17.9 152 98-254 16-216 (334)
290 3p5b_L Low density lipoprotein 96.9 0.23 7.7E-06 44.9 25.5 172 74-253 91-277 (400)
291 3m0c_C LDL receptor, low-densi 96.9 0.42 1.4E-05 47.3 31.7 223 21-256 397-635 (791)
292 3ott_A Two-component system se 96.9 0.37 1.3E-05 47.3 24.1 226 6-253 20-260 (758)
293 3ei3_A DNA damage-binding prot 96.8 0.59 2E-05 48.3 32.9 231 7-252 553-872 (1158)
294 4hw6_A Hypothetical protein, I 96.5 0.09 3.1E-06 48.2 15.9 149 97-253 141-304 (433)
295 3kya_A Putative phosphatase; s 96.5 0.15 5.1E-06 47.4 17.0 151 97-252 141-340 (496)
296 3pbp_A Nucleoporin NUP82; beta 96.5 0.17 5.9E-06 45.9 16.7 96 158-255 40-160 (452)
297 2vpj_A Kelch-like protein 12; 96.4 0.32 1.1E-05 41.6 18.2 223 18-253 14-278 (301)
298 1n7d_A LDL receptor, low-densi 96.4 0.011 3.9E-07 57.8 9.6 218 25-256 383-617 (699)
299 3sre_A PON1, serum paraoxonase 96.4 0.3 1E-05 43.4 18.0 135 112-253 82-252 (355)
300 3ott_A Two-component system se 96.4 0.85 2.9E-05 44.7 27.9 216 7-249 62-303 (758)
301 1bpo_A Protein (clathrin); cla 96.3 0.6 2.1E-05 42.5 25.7 222 74-319 47-292 (494)
302 3sre_A PON1, serum paraoxonase 96.3 0.53 1.8E-05 41.8 20.4 163 73-243 81-287 (355)
303 3m0c_C LDL receptor, low-densi 96.3 1 3.6E-05 44.5 26.5 172 74-254 403-590 (791)
304 2p9w_A MAL S 1 allergenic prot 96.2 0.55 1.9E-05 41.1 20.5 172 73-252 33-264 (334)
305 3sov_A LRP-6, low-density lipo 96.2 0.57 2E-05 40.8 31.0 222 21-256 6-241 (318)
306 3sov_A LRP-6, low-density lipo 96.0 0.71 2.4E-05 40.2 23.2 171 74-253 12-197 (318)
307 3ei3_A DNA damage-binding prot 95.9 2 6.9E-05 44.4 31.1 133 74-210 491-642 (1158)
308 2xbg_A YCF48-like protein; pho 95.8 0.87 3E-05 39.7 25.3 145 95-250 163-319 (327)
309 2be1_A Serine/threonine-protei 95.7 0.92 3.1E-05 39.9 17.5 107 21-132 12-140 (339)
310 1n7d_A LDL receptor, low-densi 95.6 0.029 1E-06 54.8 8.3 171 74-253 385-571 (699)
311 2be1_A Serine/threonine-protei 95.2 0.058 2E-06 47.6 8.2 139 106-250 12-181 (339)
312 3q6k_A 43.2 kDa salivary prote 95.2 1.6 5.6E-05 39.0 19.3 155 74-232 122-336 (381)
313 4a0p_A LRP6, LRP-6, low-densit 95.0 2.7 9.1E-05 40.4 31.3 221 21-256 8-240 (628)
314 2xzh_A Clathrin heavy chain 1; 94.8 1.9 6.4E-05 37.8 29.4 224 13-254 72-333 (365)
315 2xn4_A Kelch-like protein 2; s 94.6 1.9 6.4E-05 36.7 20.3 221 18-254 15-277 (302)
316 3s94_A LRP-6, low-density lipo 94.4 3.6 0.00012 39.4 25.0 221 21-256 11-246 (619)
317 3ii7_A Kelch-like protein 7; p 94.2 2.3 8E-05 36.1 22.6 221 19-254 12-273 (306)
318 4asc_A Kelch repeat and BTB do 94.0 2.6 9.1E-05 36.0 22.6 180 22-208 8-223 (315)
319 1xi4_A Clathrin heavy chain; a 93.9 2.5 8.6E-05 44.3 17.2 222 74-320 47-293 (1630)
320 1cru_A Protein (soluble quinop 93.8 4 0.00014 37.4 19.2 99 96-194 28-163 (454)
321 1zgk_A Kelch-like ECH-associat 93.3 3.5 0.00012 35.2 20.9 226 14-253 20-287 (308)
322 4gq2_M Nucleoporin NUP120; bet 93.1 2.5 8.5E-05 42.8 15.8 77 175-256 172-269 (950)
323 4a0p_A LRP6, LRP-6, low-densit 92.4 8 0.00027 37.0 30.2 170 74-253 14-197 (628)
324 1tl2_A L10, protein (tachylect 92.2 2.6 9E-05 34.6 11.9 142 96-254 42-209 (236)
325 2zwa_A Leucine carboxyl methyl 91.1 11 0.00038 36.5 17.4 190 17-209 396-638 (695)
326 3das_A Putative oxidoreductase 90.9 7.9 0.00027 34.0 15.7 98 95-193 32-158 (347)
327 3q6k_A 43.2 kDa salivary prote 90.6 9 0.00031 34.1 16.0 133 114-253 124-306 (381)
328 1tl2_A L10, protein (tachylect 90.4 1.5 5.2E-05 36.0 8.7 95 140-246 45-156 (236)
329 3s25_A Hypothetical 7-bladed b 88.8 11 0.00036 32.4 15.0 101 144-254 61-177 (302)
330 3ii7_A Kelch-like protein 7; p 88.7 10 0.00034 32.1 24.0 180 59-254 12-226 (306)
331 2uvk_A YJHT; unknown function, 86.7 15 0.00051 31.8 14.8 134 75-213 168-349 (357)
332 1zgk_A Kelch-like ECH-associat 86.1 15 0.0005 31.1 18.9 170 74-254 38-241 (308)
333 2g8s_A Glucose/sorbosone dehyd 85.4 18 0.00062 31.6 14.1 98 96-194 19-149 (353)
334 3sbq_A Nitrous-oxide reductase 85.3 3.8 0.00013 38.5 9.0 87 115-206 300-408 (638)
335 2vpj_A Kelch-like protein 12; 85.1 16 0.00054 30.7 25.8 170 74-254 30-232 (301)
336 1cru_A Protein (soluble quinop 85.0 15 0.00051 33.5 13.0 96 139-241 30-162 (454)
337 2ism_A Putative oxidoreductase 84.4 20 0.00068 31.2 22.1 26 9-34 32-57 (352)
338 4asc_A Kelch repeat and BTB do 83.6 19 0.00066 30.4 19.3 167 75-254 13-222 (315)
339 2zwa_A Leucine carboxyl methyl 83.3 34 0.0012 33.0 19.6 175 74-254 411-636 (695)
340 4gq2_M Nucleoporin NUP120; bet 83.1 4.1 0.00014 41.2 9.1 38 175-213 236-273 (950)
341 3a9g_A Putative uncharacterize 82.1 25 0.00086 30.7 21.2 173 74-253 48-296 (354)
342 3s94_A LRP-6, low-density lipo 82.0 36 0.0012 32.4 31.3 139 107-252 320-466 (619)
343 3das_A Putative oxidoreductase 81.9 17 0.0006 31.8 11.6 96 139-241 35-158 (347)
344 2xn4_A Kelch-like protein 2; s 78.6 28 0.00096 29.1 18.8 168 75-254 30-230 (302)
345 3f7f_A Nucleoporin NUP120; nuc 78.5 8.5 0.00029 37.3 8.9 36 176-214 223-258 (729)
346 3zwu_A Alkaline phosphatase PH 76.7 9.8 0.00033 36.1 8.8 61 176-240 477-548 (592)
347 2wg3_C Hedgehog-interacting pr 76.4 46 0.0016 30.4 14.1 99 139-243 17-159 (463)
348 3sbq_A Nitrous-oxide reductase 73.6 8.6 0.00029 36.2 7.3 74 175-254 323-409 (638)
349 2woz_A Kelch repeat and BTB do 72.7 42 0.0014 28.3 24.2 181 21-208 18-233 (318)
350 4fhn_B Nucleoporin NUP120; pro 72.1 9.1 0.00031 39.5 8.0 31 222-255 240-270 (1139)
351 2ism_A Putative oxidoreductase 71.9 49 0.0017 28.7 19.4 187 50-253 34-297 (352)
352 2woz_A Kelch repeat and BTB do 71.6 45 0.0015 28.1 17.1 93 75-170 127-233 (318)
353 2uvk_A YJHT; unknown function, 70.7 50 0.0017 28.3 13.9 62 58-124 19-97 (357)
354 4a9v_A PHOX; hydrolase, beta-p 68.0 29 0.001 32.7 9.6 62 175-240 476-548 (592)
355 3f7f_A Nucleoporin NUP120; nuc 66.2 32 0.0011 33.4 9.7 37 51-94 224-260 (729)
356 4gz8_A Semaphorin-3A; multi-do 66.2 16 0.00055 35.2 7.7 68 178-248 415-495 (667)
357 3no0_A DNA gyrase subunit A; D 65.7 59 0.002 27.2 18.1 146 147-316 80-246 (276)
358 1q47_A Semaphorin 3A; beta pro 64.4 16 0.00055 33.8 7.2 70 176-248 405-487 (495)
359 3a9g_A Putative uncharacterize 60.3 85 0.0029 27.2 24.9 62 175-241 259-330 (354)
360 2wg3_C Hedgehog-interacting pr 60.1 1E+02 0.0035 28.0 12.2 99 96-195 15-159 (463)
361 3kvp_A Uncharacterized protein 58.0 28 0.00094 22.3 5.1 32 298-333 30-61 (72)
362 4fhn_B Nucleoporin NUP120; pro 57.9 7.5 0.00026 40.1 4.1 38 175-213 238-275 (1139)
363 1olz_A Semaphorin 4D; developm 51.8 84 0.0029 30.2 10.0 70 176-248 398-477 (663)
364 3s25_A Hypothetical 7-bladed b 48.9 1.2E+02 0.0042 25.6 22.3 178 54-252 60-254 (302)
365 2g8s_A Glucose/sorbosone dehyd 48.5 1.3E+02 0.0045 25.9 22.7 69 176-251 272-350 (353)
366 3uc1_A DNA gyrase subunit A; D 47.8 1.3E+02 0.0046 25.8 22.2 150 146-316 108-279 (327)
367 3nvq_A Semaphorin-7A; beta-pro 45.9 50 0.0017 31.2 7.2 59 188-249 382-445 (590)
368 4hvt_A Ritya.17583.B, post-pro 40.8 2.6E+02 0.0088 27.0 23.2 232 11-252 132-429 (711)
369 3al9_A Plexin-A2; beta-propell 37.6 57 0.0019 30.5 6.2 68 177-248 402-476 (539)
370 1zvt_A Topoisomerase IV subuni 31.2 2.2E+02 0.0075 23.4 13.8 113 186-316 44-163 (256)
371 3ol2_B Plexin-B1; beta-propell 28.5 86 0.0029 29.2 5.7 69 177-249 389-462 (528)
372 3mez_B Mannose-specific lectin 27.6 1.6E+02 0.0054 20.6 10.3 58 178-252 26-83 (113)
373 3oky_B Putative uncharacterize 21.9 2.2E+02 0.0075 26.7 7.1 70 177-249 405-496 (565)
374 3oky_A Plexin-A2; transmembran 21.6 1.2E+02 0.004 29.3 5.4 69 178-249 402-476 (681)
No 1
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=100.00 E-value=6.1e-42 Score=311.78 Aligned_cols=296 Identities=18% Similarity=0.239 Sum_probs=239.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~ 83 (337)
.++..+|++++|+|||++||+|++++++|||+++++.......+++..+.+.++++.+++++++ |++|++||.+
T Consensus 16 ~~h~~~V~~v~fs~dg~~la~g~~~~~~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------d~~v~iWd~~ 89 (355)
T 3vu4_A 16 NHVSNPVTDYEFNQDQSCLILSTLKSFEIYNVHPVAHIMSQEMRHLSKVRMLHRTNYVAFVTGV------KEVVHIWDDV 89 (355)
T ss_dssp ---CCCCCEEEECTTSSEEEEECSSEEEEEEETTEEEEEEEECSCCCEEEECTTSSEEEEECSS------TTEEEEEETT
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCEEEEEecCCcceeeeeecCCeEEEEEcCCCCEEEEEECC------ccEEEEEECC
Confidence 4678999999999999999999999999999999888777766678888999999999888874 8899999999
Q ss_pred CCCEEEEEEcCCceeEEEEcCCeEEEEECCeEEEEECCCC-eeeeeecCCCCCceEEEEeeCCCccEEEEc-CCCCccEE
Q 019672 84 TGTALRELNFLTSILAVRLNKKRLVIVLREKTYIYDANTL-AILDTIDTVPNLKGLCAFSPSLNACFLAVP-ASTTKGSV 161 (337)
Q Consensus 84 ~~~~~~~~~~~~~v~~i~~~~~~~~v~~d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~-~~~~dg~v 161 (337)
+++++.++.++.+|.++.++++.++++.++.|++||+.++ +.+..+.. +.+++++++ .+++++ |. .+|.|
T Consensus 90 ~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~---~~~~~~~s~----~~la~~sg~-~~g~v 161 (355)
T 3vu4_A 90 KKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIR---FGGVCEFSN----GLLVYSNEF-NLGQI 161 (355)
T ss_dssp TTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEE---EEEEEEEET----TEEEEEESS-CTTCE
T ss_pred CCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEecc---CCceEEEEc----cEEEEeCCC-cCcEE
Confidence 9999999999999999999999999999999999999988 77766654 556777776 477775 44 69999
Q ss_pred EEEEccCCc-----------------c----cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcce
Q 019672 162 LVYNVMELH-----------------S----HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPS 220 (337)
Q Consensus 162 ~i~d~~~~~-----------------~----~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~ 220 (337)
++||+.++. . .|..+|++++|+|+|++||+|+.||++|+|||+++++.+.++..+.|..
T Consensus 162 ~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~ 241 (355)
T 3vu4_A 162 HITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRA 241 (355)
T ss_dssp EEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCS
T ss_pred EEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCC
Confidence 999998754 1 2458999999999999999999999745999999999999997554577
Q ss_pred eEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceee------eeccCCC
Q 019672 221 TIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVL------RNAFPAG 294 (337)
Q Consensus 221 ~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~------~~~~~~~ 294 (337)
.|++++|+|||+ +|++++.|++|+|||++.....+. ..+...++|..+...|+....... ...++++
T Consensus 242 ~v~~~~~s~~~~---~l~s~s~d~~v~iw~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 314 (355)
T 3vu4_A 242 DVVDMKWSTDGS---KLAVVSDKWTLHVFEIFNDQDNKR----HALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWI 314 (355)
T ss_dssp CEEEEEECTTSC---EEEEEETTCEEEEEESSCCSCCCS----EETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEES
T ss_pred cEEEEEECCCCC---EEEEEECCCEEEEEEccCCCCccc----ccccceeeccccccccceeEEEeccCCCCCceEEEEe
Confidence 899999999999 999999999999999986543221 111111455555566665432221 1334567
Q ss_pred cccCEEEEEEeCCcEEEEEEecCCCC
Q 019672 295 VKRASVSVITYNGYFVEYIFSINNCC 320 (337)
Q Consensus 295 ~~~~~l~~~~~dg~~~~~~~~~~~~~ 320 (337)
+++++|++++.||.+++|.+...+..
T Consensus 315 ~d~~~l~~~~~dg~~~~~~~~~~~~~ 340 (355)
T 3vu4_A 315 SESSLVVVWPHTRMIETFKVVFDDEM 340 (355)
T ss_dssp SSSEEEEEETTTTEEEEEEEEEETTT
T ss_pred CCCCEEEEEeCCCeEEEEEEEcCCCC
Confidence 78899999999999999999876544
No 2
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.9e-36 Score=273.72 Aligned_cols=274 Identities=17% Similarity=0.186 Sum_probs=213.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|..+|++++|+||+++|++|+.|+ ++|||+.+++.+..... ..+..+.+.++.+.++..+ .|+.|++|
T Consensus 52 ~gH~~~v~~~~~s~d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~-------~d~~v~iw 124 (340)
T 1got_B 52 RGHLAKIYAMHWGTDSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGG-------LDNICSIY 124 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEE-------TTCEEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEe-------CCCeEEEE
Confidence 46889999999999999999999887 59999999987766544 4456666777777766554 48999999
Q ss_pred ECCCCC----EEEEEE-cCCceeEEEEcCCeEEE-EE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEc
Q 019672 81 NTTTGT----ALRELN-FLTSILAVRLNKKRLVI-VL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 81 d~~~~~----~~~~~~-~~~~v~~i~~~~~~~~v-~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 153 (337)
|+.+++ ....+. +...|.++.++++..++ +. |+.|++||+++++.+..+..+. ..+.+++++|++.+++++
T Consensus 125 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~sg 202 (340)
T 1got_B 125 NLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHT--GDVMSLSLAPDTRLFVSG 202 (340)
T ss_dssp ETTTCSBSCEEEEEEECCSSCEEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEEEE
T ss_pred ECccCCCcceeEEEecCCCccEEEEEECCCCcEEEEECCCcEEEEECCCCcEEEEEcCCC--CceEEEEECCCCCEEEEE
Confidence 998764 333443 44578999887655444 44 8999999999999888887554 357788888888899988
Q ss_pred CCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEee
Q 019672 154 ASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 228 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs 228 (337)
+ .||.|++||++++... |..+|++++|+|+|++||+|+.||+ |++||+++++.+..+........|.+++|+
T Consensus 203 ~--~d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~-v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 279 (340)
T 1got_B 203 A--CDASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDAT-CRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp E--TTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred e--CCCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCc-EEEEECCCCcEEEEEccCCcccceEEEEEC
Confidence 8 5999999999887654 4488999999999999999999998 699999999888777543334569999999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCc
Q 019672 229 QSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY 308 (337)
Q Consensus 229 ~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 308 (337)
|+|+ +|++|+.||+|+|||+.+..... .+.. +...+..+.+.+++..|++++.||.
T Consensus 280 ~~g~---~l~~g~~d~~i~vwd~~~~~~~~-----------~~~~----------h~~~v~~~~~s~dg~~l~s~s~D~~ 335 (340)
T 1got_B 280 KSGR---LLLAGYDDFNCNVWDALKADRAG-----------VLAG----------HDNRVSCLGVTDDGMAVATGSWDSF 335 (340)
T ss_dssp TTSS---EEEEEETTSEEEEEETTTCCEEE-----------EEEC----------CSSCEEEEEECTTSSCEEEEETTSC
T ss_pred CCCC---EEEEECCCCeEEEEEcccCcEee-----------Eeec----------CCCcEEEEEEcCCCCEEEEEcCCcc
Confidence 9999 99999999999999987654311 1111 1111223344566789999999999
Q ss_pred EEEEE
Q 019672 309 FVEYI 313 (337)
Q Consensus 309 ~~~~~ 313 (337)
+++|+
T Consensus 336 i~iWd 340 (340)
T 1got_B 336 LKIWN 340 (340)
T ss_dssp EEEEC
T ss_pred EEecC
Confidence 99994
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-36 Score=270.69 Aligned_cols=274 Identities=14% Similarity=0.186 Sum_probs=211.3
Q ss_pred CCCCCCCeEEEEEcCC----CCEEEEEcCCc-eEEEeCCCCcEE--EEEee--CCEEEEEEccCCCEEEEEeCCCCCCCC
Q 019672 3 NQSSSYPVFFVSFNQD----NSGFALSTKDG-FKIFDSSTGRLC--YERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLS 73 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~d----g~~la~g~~~g-~~vw~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (337)
.++|.++|++++|+|+ +++|++|+.|+ ++||++.+++.. ..... ..+..+.+.++...++..+ .
T Consensus 28 ~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~s~s-------~ 100 (321)
T 3ow8_A 28 EQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAASSS-------L 100 (321)
T ss_dssp TTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEEEEE-------T
T ss_pred cccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEEEEe-------C
Confidence 3578999999999975 56899998877 699998877543 23333 3455556665556655544 4
Q ss_pred CceEEEEECCCCCEEEEEEcC-CceeEEEEcCCeEEE--EE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccE
Q 019672 74 PRRLCLFNTTTGTALRELNFL-TSILAVRLNKKRLVI--VL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~-~~v~~i~~~~~~~~v--~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
|++|++||+++++++..+..+ ..+.+++|+++...+ +. ++.|++||+++++....+..+. ..+.+++++|++.+
T Consensus 101 D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~~~~--~~v~~~~~spdg~~ 178 (321)
T 3ow8_A 101 DAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLDTRG--KFILSIAYSPDGKY 178 (321)
T ss_dssp TSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEECSS--SCEEEEEECTTSSE
T ss_pred CCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEecCCC--ceEEEEEECCCCCE
Confidence 999999999999998888654 478889998865333 33 8899999999998877776543 35777888889999
Q ss_pred EEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEE
Q 019672 150 LAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFS 224 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~ 224 (337)
+++++ .||.|++||+.+++.. |..+|++++|+|+|++||+|+.||+ |+|||+++++.+.++.. +...|.+
T Consensus 179 lasg~--~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~ 253 (321)
T 3ow8_A 179 LASGA--IDGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGY-IKIYDVQHANLAGTLSG--HASWVLN 253 (321)
T ss_dssp EEEEE--TTSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSC-EEEEETTTCCEEEEECC--CSSCEEE
T ss_pred EEEEc--CCCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCe-EEEEECCCcceeEEEcC--CCCceEE
Confidence 99988 5999999999988764 3478999999999999999999998 69999999998888753 4567999
Q ss_pred EEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEE
Q 019672 225 LSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT 304 (337)
Q Consensus 225 l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (337)
++|+|+++ +|++++.|++|+|||+.+...... + ......++ .+.+.+++.+|++++
T Consensus 254 ~~~sp~~~---~l~s~s~D~~v~iwd~~~~~~~~~----------~-~~h~~~v~----------~v~~s~~g~~l~s~~ 309 (321)
T 3ow8_A 254 VAFCPDDT---HFVSSSSDKSVKVWDVGTRTCVHT----------F-FDHQDQVW----------GVKYNGNGSKIVSVG 309 (321)
T ss_dssp EEECTTSS---EEEEEETTSCEEEEETTTTEEEEE----------E-CCCSSCEE----------EEEECTTSSEEEEEE
T ss_pred EEECCCCC---EEEEEeCCCcEEEEeCCCCEEEEE----------E-cCCCCcEE----------EEEECCCCCEEEEEe
Confidence 99999999 999999999999999986543221 1 01111122 223355668999999
Q ss_pred eCCcEEEEEE
Q 019672 305 YNGYFVEYIF 314 (337)
Q Consensus 305 ~dg~~~~~~~ 314 (337)
.||.+++|+.
T Consensus 310 ~d~~i~vwd~ 319 (321)
T 3ow8_A 310 DDQEIHIYDC 319 (321)
T ss_dssp TTCCEEEEEC
T ss_pred CCCeEEEEeC
Confidence 9999999985
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=4.9e-37 Score=284.72 Aligned_cols=273 Identities=14% Similarity=0.127 Sum_probs=216.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|..+|++++|+|++++|++|+.|+ ++|||+.+++....... ..+..+.+.++++.++.++ .|++|++|
T Consensus 105 ~gh~~~V~~~~~~p~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs-------~D~~i~iw 177 (410)
T 1vyh_C 105 SGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCS-------ADMTIKLW 177 (410)
T ss_dssp ECCSSCEEEEEECSSSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEE-------TTSCCCEE
T ss_pred cccCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEe-------CCCeEEEE
Confidence 36788999999999999999999887 69999999987666544 4566666666667665554 49999999
Q ss_pred ECCCCCEEEEEEc-CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC
Q 019672 81 NTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 81 d~~~~~~~~~~~~-~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
|+.+++++..+.. ...|.++.|+++. ++.++ |++|++||+++++.+..+..+. ..+.++.+++++.++++++
T Consensus 178 d~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~--~~v~~~~~~~~g~~l~s~s-- 253 (410)
T 1vyh_C 178 DFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR--EWVRMVRPNQDGTLIASCS-- 253 (410)
T ss_dssp ETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS--SCEEEEEECTTSSEEEEEE--
T ss_pred eCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC--ccEEEEEECCCCCEEEEEc--
Confidence 9999998887754 4589999998754 44445 8999999999999888887554 3567778888999999988
Q ss_pred CccEEEEEEccCCccc-----ccCceEEEEeCCC--------------------CCEEEEEeCCCcEEEEEEcCCCceeE
Q 019672 157 TKGSVLVYNVMELHSH-----CEAPLAAIVLSSN--------------------GMYIATASEQGTIIRVFLVSEATKSY 211 (337)
Q Consensus 157 ~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~d--------------------g~~lat~s~dg~~i~vwd~~~~~~~~ 211 (337)
.||.|++||+.+.... |...|.+++|+|+ |.+|++|+.||+ |++||+.+++.+.
T Consensus 254 ~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~-i~iwd~~~~~~~~ 332 (410)
T 1vyh_C 254 NDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT-IKMWDVSTGMCLM 332 (410)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE-EEEEETTTTEEEE
T ss_pred CCCeEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe-EEEEECCCCceEE
Confidence 5999999999887643 4488999999996 779999999997 6999999999988
Q ss_pred eeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeecc
Q 019672 212 SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAF 291 (337)
Q Consensus 212 ~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 291 (337)
.+.. |...|.+++|+|+|+ +|++|+.||+|+|||+........ +... ...+..+
T Consensus 333 ~~~~--h~~~v~~v~~~~~g~---~l~s~s~D~~i~vwd~~~~~~~~~-----------~~~h----------~~~v~~l 386 (410)
T 1vyh_C 333 TLVG--HDNWVRGVLFHSGGK---FILSCADDKTLRVWDYKNKRCMKT-----------LNAH----------EHFVTSL 386 (410)
T ss_dssp EEEC--CSSCEEEEEECSSSS---CEEEEETTTEEEEECCTTSCCCEE-----------EECC----------SSCEEEE
T ss_pred EEEC--CCCcEEEEEEcCCCC---EEEEEeCCCeEEEEECCCCceEEE-----------EcCC----------CCcEEEE
Confidence 8853 356799999999999 999999999999999976543211 1111 1112233
Q ss_pred CCCcccCEEEEEEeCCcEEEEEE
Q 019672 292 PAGVKRASVSVITYNGYFVEYIF 314 (337)
Q Consensus 292 ~~~~~~~~l~~~~~dg~~~~~~~ 314 (337)
.+.++++.|++++.||.+++|++
T Consensus 387 ~~~~~~~~l~sgs~D~~i~vW~~ 409 (410)
T 1vyh_C 387 DFHKTAPYVVTGSVDQTVKVWEC 409 (410)
T ss_dssp EECSSSSCEEEEETTSEEEEEC-
T ss_pred EEcCCCCEEEEEeCCCcEEEEeC
Confidence 34566689999999999999975
No 5
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=5.9e-36 Score=272.14 Aligned_cols=276 Identities=12% Similarity=0.118 Sum_probs=212.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|..+|++++|+||+++|++|+.|+ ++|||..+++....... ..+..+.+.++++.++..+ .|+++++|
T Consensus 61 ~gH~~~V~~~~~s~d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~-------~d~~i~v~ 133 (354)
T 2pbi_B 61 KGHGNKVLCMDWCKDKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGG-------LDNKCSVY 133 (354)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEES-------TTSEEEEE
T ss_pred cCCCCeEEEEEECCCCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEee-------CCCCEEEE
Confidence 47889999999999999999999888 59999998887666543 3455566666667665544 49999999
Q ss_pred ECCCCC------EEEEE-EcCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEE
Q 019672 81 NTTTGT------ALREL-NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 81 d~~~~~------~~~~~-~~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (337)
++.... ....+ .+...|.++.|+++. ++.+. |++|++||+++++.+..+..+......+++++++++.++
T Consensus 134 ~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l 213 (354)
T 2pbi_B 134 PLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTF 213 (354)
T ss_dssp ECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEE
T ss_pred EEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEE
Confidence 986542 22333 355689999998764 44455 899999999999999888776655444556666667889
Q ss_pred EEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEE
Q 019672 151 AVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSL 225 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l 225 (337)
++++ .||.|++||+++++.. |..+|++++|+|+|++||+|+.||+ ||+||+++++.+..+........+.++
T Consensus 214 ~sgs--~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-v~lwd~~~~~~~~~~~~~~~~~~~~~~ 290 (354)
T 2pbi_B 214 VSGG--CDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT-CRLYDLRADREVAIYSKESIIFGASSV 290 (354)
T ss_dssp EEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEEe--CCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe-EEEEECCCCcEEEEEcCCCcccceeEE
Confidence 9888 5999999999987754 4488999999999999999999998 699999998877766543333468999
Q ss_pred EeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEe
Q 019672 226 SFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITY 305 (337)
Q Consensus 226 ~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~ 305 (337)
+|+|+|+ +|++|+.|++|+|||+.++.... .+.. +...+..+.+.+++++|++++.
T Consensus 291 ~~s~~g~---~l~~g~~d~~i~vwd~~~~~~~~-----------~l~~----------h~~~v~~l~~spdg~~l~sgs~ 346 (354)
T 2pbi_B 291 DFSLSGR---LLFAGYNDYTINVWDVLKGSRVS-----------ILFG----------HENRVSTLRVSPDGTAFCSGSW 346 (354)
T ss_dssp EECTTSS---EEEEEETTSCEEEEETTTCSEEE-----------EECC----------CSSCEEEEEECTTSSCEEEEET
T ss_pred EEeCCCC---EEEEEECCCcEEEEECCCCceEE-----------EEEC----------CCCcEEEEEECCCCCEEEEEcC
Confidence 9999999 99999999999999997654321 1111 1111223344667789999999
Q ss_pred CCcEEEEE
Q 019672 306 NGYFVEYI 313 (337)
Q Consensus 306 dg~~~~~~ 313 (337)
||.+++|+
T Consensus 347 D~~v~vW~ 354 (354)
T 2pbi_B 347 DHTLRVWA 354 (354)
T ss_dssp TSEEEEEC
T ss_pred CCCEEecC
Confidence 99999994
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=4e-36 Score=272.27 Aligned_cols=274 Identities=10% Similarity=0.055 Sum_probs=195.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCceEEEeCCC------------CcEEEE-EeeCCEEEEEEccCCCEEEEEeCCCCCCC
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSST------------GRLCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSL 72 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~------------~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 72 (337)
+...|.+++|+|||++|+++++..+++||... +..... ....++..+++..+ +.++ +++
T Consensus 29 ~~~~v~~~~fs~dG~~l~~~sd~~~r~Wd~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d-~~l~-~~s------ 100 (344)
T 4gqb_B 29 MERQLEAARYRSDGALLLGASSLSGRCWAGSLWLFKDPCAAPNEGFCSAGVQTEAGVADLTWVGE-RGIL-VAS------ 100 (344)
T ss_dssp CCSEEEEEEECTTSCEEEEEECCSSSCCCEEEEEESSGGGTTCGGGCSEEEEESSCEEEEEEETT-TEEE-EEE------
T ss_pred ccCCEEEEEECCCCCEEEEEeCCceEEeeceeeeeccccccCCcceeeeeeccCCCEEEEEEeCC-CeEE-EEE------
Confidence 45679999999999999999977778886311 011111 12244555666554 3443 333
Q ss_pred CCceEEEEECCCCCEEEEE-----EcCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeC
Q 019672 73 SPRRLCLFNTTTGTALREL-----NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPS 144 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~-----~~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (337)
.|++|+|||+++++.+... .|...|.+++|++++ ++.+. |++|++||+.+++.+..+..|.. .+.++.++
T Consensus 101 ~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~--~V~~~~~~ 178 (344)
T 4gqb_B 101 DSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAA--QVTCVAAS 178 (344)
T ss_dssp TTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEEC
T ss_pred CCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCC--ceEEEEec
Confidence 4999999999998765433 355689999998764 44444 88999999999999999876654 56666666
Q ss_pred CCc-cEEEEcCCCCccEEEEEEccCCccccc-------CceEEEEeCCC-CCEEEEEeCCCcEEEEEEcCCCceeEeecc
Q 019672 145 LNA-CFLAVPASTTKGSVLVYNVMELHSHCE-------APLAAIVLSSN-GMYIATASEQGTIIRVFLVSEATKSYSFRR 215 (337)
Q Consensus 145 ~~~-~~la~~~~~~dg~v~i~d~~~~~~~~~-------~~i~~~~~s~d-g~~lat~s~dg~~i~vwd~~~~~~~~~~~~ 215 (337)
+++ .++++++ .||+|++||+++++.... ..+.+++|+|+ +++||+|+.||+ |+|||+++++.+.++..
T Consensus 179 ~~~~~~l~s~s--~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~-v~~wd~~~~~~~~~~~~ 255 (344)
T 4gqb_B 179 PHKDSVFLSCS--EDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGT-VSLVDTKSTSCVLSSAV 255 (344)
T ss_dssp SSCTTEEEEEE--TTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSE-EEEEESCC--CCEEEEC
T ss_pred CCCCCceeeec--cccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCc-EEEEECCCCcEEEEEcC
Confidence 665 4667776 599999999998765432 56899999994 678999999997 69999999999988853
Q ss_pred CCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCc
Q 019672 216 GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGV 295 (337)
Q Consensus 216 ~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~ 295 (337)
|...|++|+|+|++. .+||+|+.|++|+|||+.+++..+ .. .|...+..+.+.+
T Consensus 256 --h~~~v~~v~fsp~g~--~~lasgs~D~~i~vwd~~~~~~~~-----------~~-----------~H~~~V~~v~~sp 309 (344)
T 4gqb_B 256 --HSQCVTGLVFSPHSV--PFLASLSEDCSLAVLDSSLSELFR-----------SQ-----------AHRDFVRDATWSP 309 (344)
T ss_dssp --CSSCEEEEEECSSSS--CCEEEEETTSCEEEECTTCCEEEE-----------EC-----------CCSSCEEEEEECS
T ss_pred --CCCCEEEEEEccCCC--eEEEEEeCCCeEEEEECCCCcEEE-----------Ec-----------CCCCCEEEEEEeC
Confidence 356799999999984 289999999999999987653211 00 0111122333455
Q ss_pred ccCEE-EEEEeCCcEEEEEEecCC
Q 019672 296 KRASV-SVITYNGYFVEYIFSINN 318 (337)
Q Consensus 296 ~~~~l-~~~~~dg~~~~~~~~~~~ 318 (337)
++.++ ++++.||+|++|.++++.
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC--
T ss_pred CCCeEEEEEcCCCeEEEEECCCCC
Confidence 55555 578889999999997653
No 7
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.6e-35 Score=262.14 Aligned_cols=236 Identities=13% Similarity=0.138 Sum_probs=191.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
..|.++|++++|+||+++|++|+.++ +++||+++++.+..... ..+..+.+.++.+.++..+ .|++|++|
T Consensus 10 ~~h~~~V~~~~fsp~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s-------~d~~i~vw 82 (304)
T 2ynn_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGS-------DDFRIRVF 82 (304)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEE-------TTSEEEEE
T ss_pred cCCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEEC-------CCCEEEEE
Confidence 46788999999999999999998887 69999999987766554 4566677777778776655 49999999
Q ss_pred ECCCCCEEEEEEcC-CceeEEEEcCCe--EEEEE-CCeEEEEECCCC-eeeeeecCCCCCceEEEEeeCC-CccEEEEcC
Q 019672 81 NTTTGTALRELNFL-TSILAVRLNKKR--LVIVL-REKTYIYDANTL-AILDTIDTVPNLKGLCAFSPSL-NACFLAVPA 154 (337)
Q Consensus 81 d~~~~~~~~~~~~~-~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~~ 154 (337)
|+++++++..+..+ ..|.+++++++. ++.+. |++|++||++++ .....+..+. ..+.+++++| ++.++++++
T Consensus 83 d~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~--~~v~~v~~~p~~~~~l~sgs 160 (304)
T 2ynn_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE--HFVMCVAFNPKDPSTFASGC 160 (304)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCC--SCEEEEEECTTCTTEEEEEE
T ss_pred ECCCCcEEEEEeCCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccC--CcEEEEEECCCCCCEEEEEe
Confidence 99999999888754 589999998865 44444 899999999877 4445555443 3567777777 567888887
Q ss_pred CCCccEEEEEEccCCccc------ccCceEEEEeCC--CCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEE
Q 019672 155 STTKGSVLVYNVMELHSH------CEAPLAAIVLSS--NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 226 (337)
Q Consensus 155 ~~~dg~v~i~d~~~~~~~------~~~~i~~~~~s~--dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~ 226 (337)
.||+|++||+.+.... +...+..++|+| ++++|++|+.||+ |++||+++++++.++.. |...|.+++
T Consensus 161 --~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~-i~iWd~~~~~~~~~~~~--h~~~v~~~~ 235 (304)
T 2ynn_A 161 --LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNVSFAV 235 (304)
T ss_dssp --TTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSE-EEEEETTTTEEEEEEEC--CSSCEEEEE
T ss_pred --CCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCe-EEEEeCCCCccceeeCC--CCCCEEEEE
Confidence 5999999999766532 237799999987 7889999999997 69999999999988853 356799999
Q ss_pred eecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 227 FGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 227 fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
|+|+++ +|++|+.||+|+|||+.+.+.
T Consensus 236 ~~p~~~---~l~s~s~Dg~i~iWd~~~~~~ 262 (304)
T 2ynn_A 236 FHPTLP---IIISGSEDGTLKIWNSSTYKV 262 (304)
T ss_dssp ECSSSS---EEEEEETTSCEEEEETTTCCE
T ss_pred ECCCCC---EEEEEcCCCeEEEEECCCCce
Confidence 999999 999999999999999987653
No 8
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1e-34 Score=267.50 Aligned_cols=280 Identities=13% Similarity=0.112 Sum_probs=206.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEeeC--------------------CEEEEEEccCCCEEEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVG--------------------AFSIVEMLYSSSLLAIV 64 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~~ 64 (337)
.|...|++++|+|||++||+|+++.++||++.+++.+.....+ .+..+++.++++.++..
T Consensus 62 ~h~~~V~~v~fspdg~~la~g~~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~s~ 141 (393)
T 1erj_A 62 DHTSVVCCVKFSNDGEYLATGCNKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLATG 141 (393)
T ss_dssp ECSSCCCEEEECTTSSEEEEECBSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEEEE
T ss_pred CCCCEEEEEEECCCCCEEEEEcCCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEEEE
Confidence 3778899999999999999999888999999999876554321 14556666666776655
Q ss_pred eCCCCCCCCCceEEEEECCCCCEEEEEEc-CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEE
Q 019672 65 GAGEQPSLSPRRLCLFNTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCA 140 (337)
Q Consensus 65 ~~g~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 140 (337)
+ .|++|++||+++++.+..+.. ...|.++.|+++. ++.+. |++|++||+++++....+... ..+.+
T Consensus 142 ~-------~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~---~~v~~ 211 (393)
T 1erj_A 142 A-------EDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIE---DGVTT 211 (393)
T ss_dssp E-------TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECS---SCEEE
T ss_pred c-------CCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcC---CCcEE
Confidence 4 499999999999988888764 4589999998754 44444 899999999999887776532 24566
Q ss_pred EeeCC-CccEEEEcCCCCccEEEEEEccCCccc------------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCC
Q 019672 141 FSPSL-NACFLAVPASTTKGSVLVYNVMELHSH------------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA 207 (337)
Q Consensus 141 ~~~~~-~~~~la~~~~~~dg~v~i~d~~~~~~~------------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~ 207 (337)
+..+| ++.++++++ .||.|++||+.++... |...|.+++|+|+|++|++|+.||+ |++||+++.
T Consensus 212 ~~~~~~~~~~l~~~s--~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d~~-v~~wd~~~~ 288 (393)
T 1erj_A 212 VAVSPGDGKYIAAGS--LDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRS-VKLWNLQNA 288 (393)
T ss_dssp EEECSTTCCEEEEEE--TTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETTSE-EEEEEC---
T ss_pred EEEECCCCCEEEEEc--CCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCCCE-EEEEECCCC
Confidence 66666 778888887 5999999999876532 3478999999999999999999998 699999764
Q ss_pred ce------------eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccc
Q 019672 208 TK------------SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESV 275 (337)
Q Consensus 208 ~~------------~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~ 275 (337)
.. ...+. + |...|.+++|+|+++ +|++|+.|++|+|||+.++..... +........
T Consensus 289 ~~~~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~~~~~---~l~sgs~D~~v~iwd~~~~~~~~~-------l~~h~~~v~ 356 (393)
T 1erj_A 289 NNKSDSKTPNSGTCEVTYI-G-HKDFVLSVATTQNDE---YILSGSKDRGVLFWDKKSGNPLLM-------LQGHRNSVI 356 (393)
T ss_dssp ------------CEEEEEE-C-CSSCEEEEEECGGGC---EEEEEETTSEEEEEETTTCCEEEE-------EECCSSCEE
T ss_pred CCcccccCCCCCcceEEEe-c-ccCcEEEEEECCCCC---EEEEEeCCCeEEEEECCCCeEEEE-------ECCCCCCEE
Confidence 32 23332 2 345699999999999 999999999999999876643211 000000001
Q ss_pred eeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 276 NEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 276 ~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
.-.|.+. ..++++++.|++++.||.+++|+++..
T Consensus 357 ~v~~~~~--------~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 357 SVAVANG--------SSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp EEEECSS--------CTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred EEEecCC--------cCcCCCCCEEEEECCCCcEEECccccc
Confidence 1112211 123456789999999999999998653
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=8.5e-36 Score=271.41 Aligned_cols=275 Identities=10% Similarity=0.157 Sum_probs=191.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC------Cc-eEEEeCCCCcE----EEE--EeeCCEEEEEEccCCCEEEEEeCCCCCC
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTK------DG-FKIFDSSTGRL----CYE--RAVGAFSIVEMLYSSSLLAIVGAGEQPS 71 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~------~g-~~vw~~~~~~~----~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 71 (337)
.|+..|++++|+|||++||+|+. ++ +++|+..++.. ... .+...+..+++.++.. + ++++
T Consensus 40 ~H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~-~-l~~s----- 112 (357)
T 4g56_B 40 CMEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKG-I-LVAS----- 112 (357)
T ss_dssp CCCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTE-E-EEEE-----
T ss_pred cccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCC-E-EEEE-----
Confidence 47788999999999999999987 33 57888766532 111 2224456666655443 3 3343
Q ss_pred CCCceEEEEECCCCCEEEE-----EEcCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEee
Q 019672 72 LSPRRLCLFNTTTGTALRE-----LNFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSP 143 (337)
Q Consensus 72 ~~d~~v~iwd~~~~~~~~~-----~~~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (337)
.|++|+|||+.+++.... ..+...|.+++|+++. ++.+. |+.|++||+++++.+..+..+.. .+.++++
T Consensus 113 -~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~--~v~~v~~ 189 (357)
T 4g56_B 113 -DSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSS--EVNCVAA 189 (357)
T ss_dssp -TTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEE
T ss_pred -CCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCC--CEEEEEE
Confidence 489999999988865432 2345689999998864 44444 88999999999999988876554 4556666
Q ss_pred CCCcc-EEEEcCCCCccEEEEEEccCCcccc-------cCceEEEEeCCC-CCEEEEEeCCCcEEEEEEcCCCceeEeec
Q 019672 144 SLNAC-FLAVPASTTKGSVLVYNVMELHSHC-------EAPLAAIVLSSN-GMYIATASEQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 144 ~~~~~-~la~~~~~~dg~v~i~d~~~~~~~~-------~~~i~~~~~s~d-g~~lat~s~dg~~i~vwd~~~~~~~~~~~ 214 (337)
++++. ++++++ .||.|++||+++++... ...+.+++|+|+ +.+||+|+.|+. |++||+++++.+..+.
T Consensus 190 s~~~~~~~~s~~--~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~-i~~wd~~~~~~~~~~~ 266 (357)
T 4g56_B 190 CPGKDTIFLSCG--EDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGN-VSLVNIKNPDSAQTSA 266 (357)
T ss_dssp CTTCSSCEEEEE--TTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSC-EEEEESSCGGGCEEEC
T ss_pred ccCCCceeeeec--cCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccc-eeEEECCCCcEeEEEe
Confidence 55543 566666 59999999998876542 267999999997 568999999998 6999999999888875
Q ss_pred cCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCC
Q 019672 215 RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAG 294 (337)
Q Consensus 215 ~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~ 294 (337)
. +...|++|+|+|++. .+||+|+.|++|+|||+++.+..+. +. +...+..+++.
T Consensus 267 ~--~~~~v~~l~~sp~~~--~~lasgs~D~~i~iwd~~~~~~~~~-----------~~-----------H~~~V~~vafs 320 (357)
T 4g56_B 267 V--HSQNITGLAYSYHSS--PFLASISEDCTVAVLDADFSEVFRD-----------LS-----------HRDFVTGVAWS 320 (357)
T ss_dssp C--CSSCEEEEEECSSSS--CCEEEEETTSCEEEECTTSCEEEEE-----------CC-----------CSSCEEEEEEC
T ss_pred c--cceeEEEEEEcCCCC--CEEEEEeCCCEEEEEECCCCcEeEE-----------CC-----------CCCCEEEEEEe
Confidence 3 356799999999984 2899999999999999976543211 11 11112233344
Q ss_pred c-ccCEEEEEEeCCcEEEEEEecCC
Q 019672 295 V-KRASVSVITYNGYFVEYIFSINN 318 (337)
Q Consensus 295 ~-~~~~l~~~~~dg~~~~~~~~~~~ 318 (337)
| ++.+|++++.||+|++|++..+.
T Consensus 321 P~d~~~l~s~s~Dg~v~iW~~~~~~ 345 (357)
T 4g56_B 321 PLDHSKFTTVGWDHKVLHHHLPSEG 345 (357)
T ss_dssp SSSTTEEEEEETTSCEEEEECC---
T ss_pred CCCCCEEEEEcCCCeEEEEECCCCC
Confidence 4 45789999999999999996553
No 10
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=100.00 E-value=1.7e-33 Score=250.62 Aligned_cols=276 Identities=15% Similarity=0.177 Sum_probs=209.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|..+|++++|+|+|++|++|+.++ +++|++.+++....... ..+..+.+.++.+.++..+ .|+.|++|
T Consensus 20 ~gh~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-------~d~~i~vw 92 (312)
T 4ery_A 20 AGHTKAVSSVKFSPNGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSAS-------DDKTLKIW 92 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSEEEEE
T ss_pred cccCCcEEEEEECCCCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEEC-------CCCEEEEE
Confidence 57889999999999999999998887 59999998887666544 4466666666667766655 48999999
Q ss_pred ECCCCCEEEEEEcC-CceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC
Q 019672 81 NTTTGTALRELNFL-TSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 81 d~~~~~~~~~~~~~-~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
|+++++.+..+..+ ..|.++.++++. ++.+. |+.|++||+++++.+..+..+.. .+.++.+++++.++++++
T Consensus 93 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~-- 168 (312)
T 4ery_A 93 DVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSD--PVSAVHFNRDGSLIVSSS-- 168 (312)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEEEEEE--
T ss_pred ECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCC--cEEEEEEcCCCCEEEEEe--
Confidence 99999998888754 579999998764 44444 88999999999988888765543 467777788888999888
Q ss_pred CccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEee-c
Q 019672 157 TKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG-Q 229 (337)
Q Consensus 157 ~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs-~ 229 (337)
.||.|++||+.+++... ..++.+++|+|+|++|++++.||. |++||+.+++.+..+..+..........|+ +
T Consensus 169 ~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (312)
T 4ery_A 169 YDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNT-LKLWDYSKGKCLKTYTGHKNEKYCIFANFSVT 247 (312)
T ss_dssp TTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTE-EEEEETTTTEEEEEECSSCCSSSCCCEEEECS
T ss_pred CCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCe-EEEEECCCCcEEEEEEecCCceEEEEEEEEeC
Confidence 59999999998876542 267999999999999999999997 699999999988887533222122223444 6
Q ss_pred CCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEE--eCC
Q 019672 230 SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT--YNG 307 (337)
Q Consensus 230 dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~--~dg 307 (337)
++. +|++|+.||+|++||+.+...... +.. +...+..+++.++++.+++++ .||
T Consensus 248 ~~~---~l~sg~~dg~i~vwd~~~~~~~~~-----------~~~----------h~~~v~~~~~~p~~~~l~s~~~~~d~ 303 (312)
T 4ery_A 248 GGK---WIVSGSEDNLVYIWNLQTKEIVQK-----------LQG----------HTDVVISTACHPTENIIASAALENDK 303 (312)
T ss_dssp SSC---EEEECCTTSCEEEEETTTCCEEEE-----------ECC----------CSSCEEEEEECSSSSEEEEEECTTTC
T ss_pred CCc---EEEEECCCCEEEEEECCCchhhhh-----------hhc----------cCCcEEEEeecCcCCceEEEEccCCc
Confidence 777 999999999999999976543211 110 011112223355567888887 599
Q ss_pred cEEEEEEe
Q 019672 308 YFVEYIFS 315 (337)
Q Consensus 308 ~~~~~~~~ 315 (337)
.+++|+.+
T Consensus 304 ~i~~W~~d 311 (312)
T 4ery_A 304 TIKLWKSD 311 (312)
T ss_dssp CEEEEECC
T ss_pred cEEEecCC
Confidence 99999864
No 11
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=100.00 E-value=2.1e-35 Score=270.87 Aligned_cols=285 Identities=15% Similarity=0.177 Sum_probs=208.3
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
..+|.++|++++|+|++++|++|+.|+ ++|||+.+++....... ..+..+++.++++.++..+ .|+.+++
T Consensus 62 l~gH~~~V~~~~~sp~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~-------~d~~v~i 134 (380)
T 3iz6_a 62 LQGHSGKVYSLDWTPEKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGG-------LDSACSI 134 (380)
T ss_dssp ECCCSSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECC-------SSSCCEE
T ss_pred ccccccEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEee-------CCCcEEE
Confidence 357889999999999999999999887 69999999987766544 3455556666666655433 5999999
Q ss_pred EECCCCCE-------EEEE-EcCCceeEEEEcCC---eEEEEE-CCeEEEEECCCCeeeeeecC---CCCCceEEEEeeC
Q 019672 80 FNTTTGTA-------LREL-NFLTSILAVRLNKK---RLVIVL-REKTYIYDANTLAILDTIDT---VPNLKGLCAFSPS 144 (337)
Q Consensus 80 wd~~~~~~-------~~~~-~~~~~v~~i~~~~~---~~~v~~-d~~i~i~d~~~~~~~~~~~~---~~~~~~~~~~~~~ 144 (337)
||+.+... ...+ .|...|.++.+.++ .++.+. |++|++||+.+++.+..+.. ..+...+.+++++
T Consensus 135 w~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 214 (380)
T 3iz6_a 135 FNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSIN 214 (380)
T ss_dssp EECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEEC
T ss_pred EECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEee
Confidence 99875321 1222 23446777888663 355555 89999999999988776622 2234456777775
Q ss_pred C-CccEEEEcCCCCccEEEEEEccCC-cc-----cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCC
Q 019672 145 L-NACFLAVPASTTKGSVLVYNVMEL-HS-----HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT 217 (337)
Q Consensus 145 ~-~~~~la~~~~~~dg~v~i~d~~~~-~~-----~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~ 217 (337)
+ ++.++++++ .||.|++||++.. .. .|..+|++++|+|+|++|++|+.||+ |+|||+++++.+..+....
T Consensus 215 ~~~~~~l~sgs--~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~-i~lwd~~~~~~~~~~~~~~ 291 (380)
T 3iz6_a 215 SLNANMFISGS--CDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGT-CRLFDMRTGHQLQVYNREP 291 (380)
T ss_dssp SSSCCEEEEEE--TTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSC-EEEEETTTTEEEEEECCCC
T ss_pred cCCCCEEEEEE--CCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCe-EEEEECCCCcEEEEecccc
Confidence 5 667888887 5999999999743 22 24589999999999999999999998 6999999999887775432
Q ss_pred c-----ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccC
Q 019672 218 Y-----PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFP 292 (337)
Q Consensus 218 ~-----~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~ 292 (337)
. ...|.+++|+|+|+ +|++|+.||+|+|||+........ +...... +...+..+.
T Consensus 292 ~~~~~~~~~v~~~~~s~~g~---~l~~g~~dg~i~vwd~~~~~~~~~-------~~~~~~~----------h~~~v~~l~ 351 (380)
T 3iz6_a 292 DRNDNELPIVTSVAFSISGR---LLFAGYSNGDCYVWDTLLAEMVLN-------LGTLQNS----------HEGRISCLG 351 (380)
T ss_dssp SSSCCSSCSCSEEEECSSSS---EEEEECTTSCEEEEETTTCCEEEE-------ECCSCSS----------CCCCCCEEE
T ss_pred cccccccCceEEEEECCCCC---EEEEEECCCCEEEEECCCCceEEE-------EecccCC----------CCCceEEEE
Confidence 1 12388999999999 999999999999999876543211 0000000 111122334
Q ss_pred CCcccCEEEEEEeCCcEEEEEEecC
Q 019672 293 AGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 293 ~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
+.+++..|++++.||.+++|++...
T Consensus 352 ~s~dg~~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 352 LSSDGSALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp ECSSSSEEEEECTTSCEEEEECCSS
T ss_pred ECCCCCEEEEeeCCCCEEEEecCCC
Confidence 4667789999999999999998643
No 12
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=1.5e-33 Score=252.42 Aligned_cols=282 Identities=11% Similarity=0.111 Sum_probs=205.3
Q ss_pred CCCCCCCeEEEEEcCCC-CEEEEEcCCc-eEEEeCCCCc-----EEEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCC
Q 019672 3 NQSSSYPVFFVSFNQDN-SGFALSTKDG-FKIFDSSTGR-----LCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLS 73 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg-~~la~g~~~g-~~vw~~~~~~-----~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (337)
..+|.++|++++|+|++ ++|++|+.|+ +++|++.+.. .+.... .+.+..+.+.+++..++..+ .
T Consensus 13 l~gH~~~V~~l~~~~~~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s-------~ 85 (319)
T 3frx_A 13 LEGHNGWVTSLATSAGQPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSAS-------W 85 (319)
T ss_dssp ECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEE-------T
T ss_pred EccccceEEEEEccCCCccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEe-------C
Confidence 45799999999999976 7899998887 5999986432 233333 34566667777777766655 4
Q ss_pred CceEEEEECCCCCEEEEEEc-CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCC----
Q 019672 74 PRRLCLFNTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL---- 145 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~-~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~---- 145 (337)
|++|++||+++++++..+.. ..+|.++.++++. ++.+. |++|++||++. +.+..+..+.. .+.++.+.|
T Consensus 86 D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~h~~--~v~~~~~~~~~~~ 162 (319)
T 3frx_A 86 DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLGHND--WVSQVRVVPNEKA 162 (319)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECCCSS--CEEEEEECCC---
T ss_pred CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEeccCC--cEEEEEEccCCCC
Confidence 99999999999999888764 4589999998765 34444 88999999974 45556655444 344555444
Q ss_pred --CccEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCc
Q 019672 146 --NACFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 218 (337)
Q Consensus 146 --~~~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~ 218 (337)
++..+++++ .|+.|++||+.+.+.. |..+|++++|+|+|++||+|+.||+ |+|||+.+++.+..+..
T Consensus 163 ~~~~~~l~s~~--~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~-i~iwd~~~~~~~~~~~~--- 236 (319)
T 3frx_A 163 DDDSVTIISAG--NDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASAGKDGE-IMLWNLAAKKAMYTLSA--- 236 (319)
T ss_dssp ---CCEEEEEE--TTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---
T ss_pred CCCccEEEEEe--CCCEEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEecC---
Confidence 344788877 5999999999887643 4589999999999999999999997 69999999999888853
Q ss_pred ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccC
Q 019672 219 PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRA 298 (337)
Q Consensus 219 ~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 298 (337)
...|.+++|+|++. +|++++.+ .+++|+++.......... . ....... +...+..+++.++++
T Consensus 237 ~~~v~~~~~sp~~~---~la~~~~~-~i~v~~~~~~~~~~~~~~--~-~~~~~~~----------~~~~v~~~~~spdg~ 299 (319)
T 3frx_A 237 QDEVFSLAFSPNRY---WLAAATAT-GIKVFSLDPQYLVDDLRP--E-FAGYSKA----------AEPHAVSLAWSADGQ 299 (319)
T ss_dssp CSCEEEEEECSSSS---EEEEEETT-EEEEEEETTEEEEEEECC--C-CTTCCGG----------GCCCEEEEEECTTSS
T ss_pred CCcEEEEEEcCCCC---EEEEEcCC-CcEEEEeCcCeeeeccCc--c-ccccccC----------cCcceeEEEECCCCC
Confidence 34699999999999 88888765 599999876432211000 0 0000000 001112344567779
Q ss_pred EEEEEEeCCcEEEEEEecC
Q 019672 299 SVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 299 ~l~~~~~dg~~~~~~~~~~ 317 (337)
+|++++.||.+++|++.+.
T Consensus 300 ~l~sg~~Dg~i~vWd~~t~ 318 (319)
T 3frx_A 300 TLFAGYTDNVIRVWQVMTA 318 (319)
T ss_dssp EEEEEETTSCEEEEEEEEC
T ss_pred EEEEeecCceEEEEEEeec
Confidence 9999999999999999764
No 13
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=8e-34 Score=276.10 Aligned_cols=278 Identities=14% Similarity=0.103 Sum_probs=202.5
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEe---------eCCEEEEEEccCCCEEEEEeCCCCCCCC
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA---------VGAFSIVEMLYSSSLLAIVGAGEQPSLS 73 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (337)
..|...|++++|+|||++|++|+.|+ +++||+.+++.+.... ...+..+.+.+++..++..+ .
T Consensus 187 ~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s-------~ 259 (611)
T 1nr0_A 187 GEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASAS-------A 259 (611)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEE-------T
T ss_pred ccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEe-------C
Confidence 46788999999999999999998877 6999999888766542 23466667776777776655 4
Q ss_pred CceEEEEECCCCCEEEEEE--------------------------------------------cCCceeEEEEcCCe--E
Q 019672 74 PRRLCLFNTTTGTALRELN--------------------------------------------FLTSILAVRLNKKR--L 107 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~--------------------------------------------~~~~v~~i~~~~~~--~ 107 (337)
|++|++||+++++++.++. |...|.+++|++++ +
T Consensus 260 D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l 339 (611)
T 1nr0_A 260 DKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTL 339 (611)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred CCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEE
Confidence 9999999999887665442 33478999998765 4
Q ss_pred EEEE-CCeEEEEECCCCeeeeeec-CC-----------------------------------------------------
Q 019672 108 VIVL-REKTYIYDANTLAILDTID-TV----------------------------------------------------- 132 (337)
Q Consensus 108 ~v~~-d~~i~i~d~~~~~~~~~~~-~~----------------------------------------------------- 132 (337)
+.+. |++|++||+.+++....+. .+
T Consensus 340 ~s~s~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (611)
T 1nr0_A 340 FSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAV 419 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEE
T ss_pred EEEeCCCcEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEE
Confidence 4444 8999999998765433210 00
Q ss_pred -CC-------------------------CceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc------cccCceEEE
Q 019672 133 -PN-------------------------LKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS------HCEAPLAAI 180 (337)
Q Consensus 133 -~~-------------------------~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~------~~~~~i~~~ 180 (337)
++ ...+.+++++|++.++|+++ .|+.|++||+.+... .|...|+++
T Consensus 420 s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs--~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v 497 (611)
T 1nr0_A 420 SADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGG--QDSKVHVYKLSGASVSEVKTIVHPAEITSV 497 (611)
T ss_dssp CTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEE--TTSEEEEEEEETTEEEEEEEEECSSCEEEE
T ss_pred eCCCcEEEEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeC--CCCeEEEEEccCCceeeeeccCCCCceEEE
Confidence 00 01234677788999999988 599999999976532 255889999
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEEcCC-CceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCC
Q 019672 181 VLSSNGMYIATASEQGTIIRVFLVSE-ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRR 259 (337)
Q Consensus 181 ~~s~dg~~lat~s~dg~~i~vwd~~~-~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~ 259 (337)
+|+|||++||+++.|++ |++||+.+ ++.+.....+.|...|.+|+|||||+ +||+|+.|++|+||+++.+.....
T Consensus 498 ~fspdg~~las~s~d~~-v~~w~~~~~~~~~~~~~~~~H~~~V~~v~fspdg~---~lasgs~D~~v~lW~~~~~~~~~~ 573 (611)
T 1nr0_A 498 AFSNNGAFLVATDQSRK-VIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV---RLATGSLDNSVIVWNMNKPSDHPI 573 (611)
T ss_dssp EECTTSSEEEEEETTSC-EEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTSS---EEEEEETTSCEEEEETTCTTSCCE
T ss_pred EECCCCCEEEEEcCCCC-EEEEEcCCCCceeeeeeeeecccceeEEEECCCCC---EEEEEECCCcEEEEECCCcccccc
Confidence 99999999999999998 69999988 55544312233567899999999999 999999999999999976543110
Q ss_pred CCccccccccccccc-ceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEE
Q 019672 260 GGRTSSILGSILPES-VNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIF 314 (337)
Q Consensus 260 ~~~~~~~~~~~~~~~-~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~ 314 (337)
..+... ...++ .+.+.+++. |++++.||++++|++
T Consensus 574 ---------~~~~~h~~~~v~----------~v~fs~d~~-l~s~~~D~~i~lW~~ 609 (611)
T 1nr0_A 574 ---------IIKGAHAMSSVN----------SVIWLNETT-IVSAGQDSNIKFWNV 609 (611)
T ss_dssp ---------EETTSSTTSCEE----------EEEEEETTE-EEEEETTSCEEEEEC
T ss_pred ---------hhhccCcccCee----------EEEEcCCCE-EEEecCCCCEEEEec
Confidence 001000 11122 222344445 999999999999987
No 14
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=1e-33 Score=256.40 Aligned_cols=234 Identities=9% Similarity=0.057 Sum_probs=178.2
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEE----E--eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 7 SYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYE----R--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~----~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
..+|++++|+||+. |++|+.++ ++|||+++++.+.. . +...+..+++.++++.++..+ .|++|++
T Consensus 82 ~~~v~~~~~s~d~~-l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs-------~d~~i~i 153 (344)
T 4gqb_B 82 EAGVADLTWVGERG-ILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGS-------KDICIKV 153 (344)
T ss_dssp SSCEEEEEEETTTE-EEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEE-------TTSCEEE
T ss_pred CCCEEEEEEeCCCe-EEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEe-------CCCeEEE
Confidence 46799999999965 56666665 69999998864322 2 224566777777777776655 4999999
Q ss_pred EECCCCCEEEEEEc-CCceeEEEEcCCe---EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCC-ccEEEEc
Q 019672 80 FNTTTGTALRELNF-LTSILAVRLNKKR---LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLN-ACFLAVP 153 (337)
Q Consensus 80 wd~~~~~~~~~~~~-~~~v~~i~~~~~~---~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~la~~ 153 (337)
||+++++++..+.. ...|.++.|+++. ++.+. |++|++||+++++....+....+...+.+++++|+ +.+++++
T Consensus 154 wd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg 233 (344)
T 4gqb_B 154 WDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFG 233 (344)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEE
T ss_pred EECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEe
Confidence 99999999988874 4589999998653 34444 89999999999988887765444445667777764 4577777
Q ss_pred CCCCccEEEEEEccCCccc-----ccCceEEEEeCCCC-CEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEe
Q 019672 154 ASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNG-MYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSF 227 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg-~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~f 227 (337)
+ .||.|++||+++++.+ |..+|++++|+|+| ++||+||.||+ |+|||+.+++.+. +. + |...|++|+|
T Consensus 234 ~--~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~-i~vwd~~~~~~~~-~~-~-H~~~V~~v~~ 307 (344)
T 4gqb_B 234 D--ENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCS-LAVLDSSLSELFR-SQ-A-HRDFVRDATW 307 (344)
T ss_dssp E--TTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTCCEEEE-EC-C-CSSCEEEEEE
T ss_pred c--cCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCe-EEEEECCCCcEEE-Ec-C-CCCCEEEEEE
Confidence 6 5999999999988764 44889999999998 58999999998 6999999987654 42 3 4667999999
Q ss_pred ecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 228 GQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 228 s~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
||+++ .+|+++|.|++|++|+++++..
T Consensus 308 sp~~~--~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 308 SPLNH--SLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp CSSST--TEEEEEETTSCEEEEECCC---
T ss_pred eCCCC--eEEEEEcCCCeEEEEECCCCCC
Confidence 99987 2688999999999999986543
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=100.00 E-value=8.5e-33 Score=249.94 Aligned_cols=289 Identities=12% Similarity=0.111 Sum_probs=198.9
Q ss_pred CCCCCCCeEEEEE-----cC-CCCEEEEEcCCc-eEEEeCCCCc-------EEEEEe--eCCEEEEEEccCCCEEEEEeC
Q 019672 3 NQSSSYPVFFVSF-----NQ-DNSGFALSTKDG-FKIFDSSTGR-------LCYERA--VGAFSIVEMLYSSSLLAIVGA 66 (337)
Q Consensus 3 ~~~~~~~v~~~~f-----s~-dg~~la~g~~~g-~~vw~~~~~~-------~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 66 (337)
..+|..+|++++| ++ |+++|++|+.|+ +++||+.+.+ ...... ...+..+.+.++...++..+
T Consensus 17 l~gH~~~V~~~~~~~s~~~~~d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s~s- 95 (343)
T 2xzm_R 17 LEGHSDWVTSIVAGFSQKENEDSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAISSS- 95 (343)
T ss_dssp EECCSSCEEEEEECCCSSTTCCCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEEEE-
T ss_pred eccchhhhhheeeEEEeecCCCCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEEEc-
Confidence 3478999999999 76 999999999887 6999987542 223332 34566666666666665544
Q ss_pred CCCCCCCCceEEEEECCCCCEEEEEEc-CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEe
Q 019672 67 GEQPSLSPRRLCLFNTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFS 142 (337)
Q Consensus 67 g~~~~~~d~~v~iwd~~~~~~~~~~~~-~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~ 142 (337)
.|++|++||+++++.+..+.. ...|.+++|+++. ++.+. |++|++||+.............+...+.++.
T Consensus 96 ------~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~ 169 (343)
T 2xzm_R 96 ------WDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVR 169 (343)
T ss_dssp ------TTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEE
T ss_pred ------CCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeee
Confidence 499999999999999888764 4589999998764 44444 8999999997543332222223334566666
Q ss_pred eCCCc----------cEEEEcCCCCccEEEEEEccCCcc----cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCC-C
Q 019672 143 PSLNA----------CFLAVPASTTKGSVLVYNVMELHS----HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE-A 207 (337)
Q Consensus 143 ~~~~~----------~~la~~~~~~dg~v~i~d~~~~~~----~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~-~ 207 (337)
++|++ .++++++ .||.|++||...... .|..+|++++|+|+|++||+|+.||+ |++||+.+ +
T Consensus 170 ~~~~~~~~~~~~~~~~~l~s~~--~d~~i~iwd~~~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~-v~iwd~~~~~ 246 (343)
T 2xzm_R 170 YSPIMKSANKVQPFAPYFASVG--WDGRLKVWNTNFQIRYTFKAHESNVNHLSISPNGKYIATGGKDKK-LLIWDILNLT 246 (343)
T ss_dssp ECCCCCSCSCCCSSCCEEEEEE--TTSEEEEEETTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTCE-EEEEESSCCS
T ss_pred eccccccccccCCCCCEEEEEc--CCCEEEEEcCCCceeEEEcCccccceEEEECCCCCEEEEEcCCCe-EEEEECCCCc
Confidence 66654 6888887 599999999543221 24588999999999999999999998 69999954 4
Q ss_pred ceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceee
Q 019672 208 TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVL 287 (337)
Q Consensus 208 ~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 287 (337)
.....+.. ...|.+++|+|+++ +|+++ .|+.|+||++.+....... . +.+......-....+...
T Consensus 247 ~~~~~~~~---~~~v~~v~~sp~~~---~la~~-~d~~v~iw~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~ 311 (343)
T 2xzm_R 247 YPQREFDA---GSTINQIAFNPKLQ---WVAVG-TDQGVKIFNLMTQSKAPVC----T----IEAEPITKAEGQKGKNPQ 311 (343)
T ss_dssp SCSEEEEC---SSCEEEEEECSSSC---EEEEE-ESSCEEEEESSSCCSCSEE----E----CCCCSGGGBTTBCCSCCC
T ss_pred ccceeecC---CCcEEEEEECCCCC---EEEEE-CCCCEEEEEeCCCCCCceE----E----eecCcchhhhhhcCCCCc
Confidence 44444422 23599999999998 77655 5778999999765432200 0 000000000000011112
Q ss_pred eeccCCCcccCEEEEEEeCCcEEEEEEec
Q 019672 288 RNAFPAGVKRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~dg~~~~~~~~~ 316 (337)
+..+++.++++.|++++.||.+++|++++
T Consensus 312 v~~~~~sp~g~~l~sg~~Dg~v~~w~~~~ 340 (343)
T 2xzm_R 312 CTSLAWNALGKKLFAGFTDGVIRTFSFET 340 (343)
T ss_dssp EEEEEECSSSCCEEEEETTSEEEEEEEEE
T ss_pred eEEEEECCCCCeEEEecCCceEEEEEEEc
Confidence 23445567779999999999999999864
No 16
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=100.00 E-value=3.6e-33 Score=252.78 Aligned_cols=287 Identities=12% Similarity=0.168 Sum_probs=204.2
Q ss_pred CCCCC-CeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEE--E---eeCCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 4 QSSSY-PVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYE--R---AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 4 ~~~~~-~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~--~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
.+|.. +|++++|+|||++||+|+.|+ ++|||+++++.... . +...+..+++.++++.++..+ .|++
T Consensus 12 ~~h~~~~v~~l~~sp~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s-------~D~~ 84 (345)
T 3fm0_A 12 PAHPDSRCWFLAWNPAGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASAS-------FDAT 84 (345)
T ss_dssp CCSTTSCEEEEEECTTSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred cCCCCCcEEEEEECCCCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEE-------CCCc
Confidence 35666 899999999999999998877 69999988754322 1 224567777777777776655 4999
Q ss_pred EEEEECCCCC--EEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCee---eeeecCCCCCceEEEEeeCCCc
Q 019672 77 LCLFNTTTGT--ALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAI---LDTIDTVPNLKGLCAFSPSLNA 147 (337)
Q Consensus 77 v~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 147 (337)
|++||..++. ++..+. +..+|.+++|+++. ++.+. |+.|++||+.++.. +..+..+ ...+.++.++|++
T Consensus 85 v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~ 162 (345)
T 3fm0_A 85 TCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSH--TQDVKHVVWHPSQ 162 (345)
T ss_dssp EEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCC--CSCEEEEEECSSS
T ss_pred EEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCc--CCCeEEEEECCCC
Confidence 9999998775 345554 44589999998764 44444 89999999987633 3444433 3457777888888
Q ss_pred cEEEEcCCCCccEEEEEEccCCcc-------cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCC-------------
Q 019672 148 CFLAVPASTTKGSVLVYNVMELHS-------HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA------------- 207 (337)
Q Consensus 148 ~~la~~~~~~dg~v~i~d~~~~~~-------~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~------------- 207 (337)
.+|++++ .|+.|++||+.+... .|..+|++++|+|+|++||+|+.||+ |+|||...+
T Consensus 163 ~~l~s~s--~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~-v~iW~~~~~~~~~~~~~~~~~~ 239 (345)
T 3fm0_A 163 ELLASAS--YDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDRT-VRIWRQYLPGNEQGVACSGSDP 239 (345)
T ss_dssp SCEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEEEECTTCTTCCCCC---C
T ss_pred CEEEEEe--CCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeCCCe-EEEeccccCCCCccceeeccCC
Confidence 8999988 599999999987642 24589999999999999999999998 699997432
Q ss_pred --ceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccce
Q 019672 208 --TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHH 285 (337)
Q Consensus 208 --~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 285 (337)
+.+..+. +.+...|++++|+|++. .|++++.|++|+||++.....+..+. ......... .+.
T Consensus 240 ~~~~~~~~~-~~h~~~v~~v~~~~~~~---~l~s~~~d~~i~vw~~~~~~~~~~~~--~~~~~~~~~----------~h~ 303 (345)
T 3fm0_A 240 SWKCICTLS-GFHSRTIYDIAWCQLTG---ALATACGDDAIRVFQEDPNSDPQQPT--FSLTAHLHQ----------AHS 303 (345)
T ss_dssp EEEEEEEEC-SSCSSCEEEEEECTTTC---CEEEEETTSCEEEEEECTTSCTTSCC--EEEEEEETT----------SSS
T ss_pred ccceeEEec-CCCCCcEEEEEEecCCC---EEEEEeCCCeEEEEEeCCCCCcceee--EEEEeeecc----------ccc
Confidence 1233332 33556799999999999 99999999999999987654322100 000000000 111
Q ss_pred eeeeccCCCccc-CEEEEEEeCCcEEEEEEecCC
Q 019672 286 VLRNAFPAGVKR-ASVSVITYNGYFVEYIFSINN 318 (337)
Q Consensus 286 ~~~~~~~~~~~~-~~l~~~~~dg~~~~~~~~~~~ 318 (337)
..+..+++.|++ ..|++++.||.+++|++...+
T Consensus 304 ~~V~~v~~~p~~~~~laS~s~Dg~v~~W~~~~~~ 337 (345)
T 3fm0_A 304 QDVNCVAWNPKEPGLLASCSDDGEVAFWKYQRPE 337 (345)
T ss_dssp SCEEEEEECSSSTTEEEEEETTSCEEEEEECC--
T ss_pred CcEeEeEEeCCCceEEEEcCCCCcEEEEEecCCC
Confidence 123334445554 478899999999999997654
No 17
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=100.00 E-value=1.4e-33 Score=274.34 Aligned_cols=281 Identities=16% Similarity=0.180 Sum_probs=209.7
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEEcCCc-eEEEeCCCCcEEEEEeeC--CEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 4 QSSSYPVFFVSFNQDNS-GFALSTKDG-FKIFDSSTGRLCYERAVG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~-~la~g~~~g-~~vw~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
.+|..+|++++|+|++. .|++|+.|+ +++||..+++.+.....| .+..+++.++++.++..+ .|++|++
T Consensus 144 ~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s-------~D~~i~l 216 (611)
T 1nr0_A 144 TGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTG-------GDGTIVL 216 (611)
T ss_dssp CCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSCEEE
T ss_pred cCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEE-------CCCcEEE
Confidence 46788999999999997 588888877 699999988877665443 466667777777766655 4999999
Q ss_pred EECCCCCEEEEE--------EcCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCC----------------
Q 019672 80 FNTTTGTALREL--------NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTV---------------- 132 (337)
Q Consensus 80 wd~~~~~~~~~~--------~~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~---------------- 132 (337)
||..+++++..+ .|...|.+++|+|+. ++.+. |++|++||+.+++.+..+..+
T Consensus 217 wd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (611)
T 1nr0_A 217 YNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQA 296 (611)
T ss_dssp EETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSC
T ss_pred EECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCE
Confidence 999999988877 355689999998865 44444 899999999988766544211
Q ss_pred -------------------------CCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc---------------
Q 019672 133 -------------------------PNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH--------------- 172 (337)
Q Consensus 133 -------------------------~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~--------------- 172 (337)
.+...+.+++++|++.+|++++ .|+.|++||+.++...
T Consensus 297 l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s--~D~~v~~Wd~~~~~~~~~~~~~h~~~v~~~~ 374 (611)
T 1nr0_A 297 LVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSAD--AEGHINSWDISTGISNRVFPDVHATMITGIK 374 (611)
T ss_dssp EEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE--TTSCEEEEETTTCCEEECSSCSCSSCEEEEE
T ss_pred EEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEe--CCCcEEEEECCCCceeeecccCCcceEEEEE
Confidence 2334577888889999999988 5999999998754210
Q ss_pred ------------------------------------------------------------------------ccCceEEE
Q 019672 173 ------------------------------------------------------------------------CEAPLAAI 180 (337)
Q Consensus 173 ------------------------------------------------------------------------~~~~i~~~ 180 (337)
+...+.++
T Consensus 375 ~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~~~~~~~v~~~~~~~~~~~~~~~~v~~v 454 (611)
T 1nr0_A 375 TTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCV 454 (611)
T ss_dssp ECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEE
T ss_pred ECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEEEEEeCceEEEEeCCceeeeecCCCceEE
Confidence 01236789
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCC
Q 019672 181 VLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRG 260 (337)
Q Consensus 181 ~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~ 260 (337)
+|+|||++||+|+.||+ |+|||+.+++....... .|...|++|+|||||+ +|++++.|++|++|++.+..+...
T Consensus 455 a~spdg~~lasgs~D~~-v~lwd~~~~~~~~~~~~-~h~~~v~~v~fspdg~---~las~s~d~~v~~w~~~~~~~~~~- 528 (611)
T 1nr0_A 455 ALSNDKQFVAVGGQDSK-VHVYKLSGASVSEVKTI-VHPAEITSVAFSNNGA---FLVATDQSRKVIPYSVANNFELAH- 528 (611)
T ss_dssp EECTTSCEEEEEETTSE-EEEEEEETTEEEEEEEE-ECSSCEEEEEECTTSS---EEEEEETTSCEEEEEGGGTTEESC-
T ss_pred EEeCCCCEEEEeCCCCe-EEEEEccCCceeeeecc-CCCCceEEEEECCCCC---EEEEEcCCCCEEEEEcCCCCceee-
Confidence 99999999999999997 69999987654211112 2456799999999999 999999999999999875322110
Q ss_pred CcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEec
Q 019672 261 GRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 261 ~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~ 316 (337)
. . .... +...+..+.+.|++++|++++.||++++|+++.
T Consensus 529 --~-~----~~~~----------H~~~V~~v~fspdg~~lasgs~D~~v~lW~~~~ 567 (611)
T 1nr0_A 529 --T-N----SWTF----------HTAKVACVSWSPDNVRLATGSLDNSVIVWNMNK 567 (611)
T ss_dssp --C-C----CCCC----------CSSCEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred --e-e----eeee----------cccceeEEEECCCCCEEEEEECCCcEEEEECCC
Confidence 0 0 0000 111223444577789999999999999999864
No 18
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=5e-33 Score=249.48 Aligned_cols=232 Identities=15% Similarity=0.200 Sum_probs=193.2
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCC--EEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGA--FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.++...|++++|++++.++++|+.++ +++||+.+++.+.....+. +..+.+.++++.++..+ .|++|++|
T Consensus 77 ~gh~~~v~~~~~~~~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~g~-------~dg~v~i~ 149 (321)
T 3ow8_A 77 EGHQLGVVSVDISHTLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYLATGT-------HVGKVNIF 149 (321)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEEEEEC-------TTSEEEEE
T ss_pred ccCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEEEEEc-------CCCcEEEE
Confidence 57888999999999999999998877 6999999998877665433 44456666667665544 48999999
Q ss_pred ECCCCCEEEEEEcC-CceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC
Q 019672 81 NTTTGTALRELNFL-TSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 81 d~~~~~~~~~~~~~-~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
|+++++....+..+ ..|.+++|+++. ++++. |+.|++||+++++.+..+..+.. .+.+++++|++.+|++++
T Consensus 150 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~~h~~--~v~~l~~spd~~~l~s~s-- 225 (321)
T 3ow8_A 150 GVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLLHTLEGHAM--PIRSLTFSPDSQLLVTAS-- 225 (321)
T ss_dssp ETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSS--CCCEEEECTTSCEEEEEC--
T ss_pred EcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEcccCC--ceeEEEEcCCCCEEEEEc--
Confidence 99999988877655 479999998865 44444 89999999999999888876544 455667778888999988
Q ss_pred CccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCC
Q 019672 157 TKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSM 231 (337)
Q Consensus 157 ~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg 231 (337)
.||.|++||+++.... |..+|.+++|+|+|++|++|+.||+ |+|||+.+++.+.++.. +...|.+++|+|++
T Consensus 226 ~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D~~-v~iwd~~~~~~~~~~~~--h~~~v~~v~~s~~g 302 (321)
T 3ow8_A 226 DDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSDKS-VKVWDVGTRTCVHTFFD--HQDQVWGVKYNGNG 302 (321)
T ss_dssp TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTTS
T ss_pred CCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCCCc-EEEEeCCCCEEEEEEcC--CCCcEEEEEECCCC
Confidence 5999999999887654 4478999999999999999999998 69999999999988853 45679999999999
Q ss_pred CcccEEEEEeCCCcEEEEecC
Q 019672 232 QFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 232 ~~~~~las~s~dg~v~iw~l~ 252 (337)
+ +|++++.||+|+|||+.
T Consensus 303 ~---~l~s~~~d~~i~vwd~p 320 (321)
T 3ow8_A 303 S---KIVSVGDDQEIHIYDCP 320 (321)
T ss_dssp S---EEEEEETTCCEEEEECC
T ss_pred C---EEEEEeCCCeEEEEeCC
Confidence 9 99999999999999964
No 19
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=100.00 E-value=8.5e-33 Score=252.38 Aligned_cols=193 Identities=10% Similarity=0.123 Sum_probs=156.2
Q ss_pred EEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEEcCCeEEE--EECCeEEEEECCCCeeee
Q 019672 50 SIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVI--VLREKTYIYDANTLAILD 127 (337)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~v--~~d~~i~i~d~~~~~~~~ 127 (337)
..+++.+++..+++++++ .|++|+|||+++++++.++.++.+|.+++|+|++..+ +.++.+.+|+..+++.+.
T Consensus 137 ~~v~fSpDg~~la~as~~-----~d~~i~iwd~~~~~~~~~~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~ 211 (365)
T 4h5i_A 137 KLVYISREGTVAAIASSK-----VPAIMRIIDPSDLTEKFEIETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIA 211 (365)
T ss_dssp EEEEECTTSSCEEEEESC-----SSCEEEEEETTTTEEEEEEECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEE
T ss_pred EEEEEcCCCCEEEEEECC-----CCCEEEEeECCCCcEEEEeCCCCceEEEEEccCCceEEeccceeEEEEEeccCccee
Confidence 345666777777777763 6899999999999999999998999999999875443 448888999888877665
Q ss_pred eecCCCCCceEEEEeeCCCccEEEEcCCCCcc----EEEEEEccCCcc---------cccCceEEEEeCCCCCEEEEEeC
Q 019672 128 TIDTVPNLKGLCAFSPSLNACFLAVPASTTKG----SVLVYNVMELHS---------HCEAPLAAIVLSSNGMYIATASE 194 (337)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg----~v~i~d~~~~~~---------~~~~~i~~~~~s~dg~~lat~s~ 194 (337)
......+...+.++.++|++.++++++. ++ .+++||+..... .+..+|++++|||||++||+|+.
T Consensus 212 ~~~~~~~~~~v~~v~fspdg~~l~~~s~--d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~ 289 (365)
T 4h5i_A 212 RKTDFDKNWSLSKINFIADDTVLIAASL--KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASN 289 (365)
T ss_dssp EECCCCTTEEEEEEEEEETTEEEEEEEE--SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEET
T ss_pred eeecCCCCCCEEEEEEcCCCCEEEEEec--CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcC
Confidence 4433344456777788888889888763 43 688898875542 13378999999999999999999
Q ss_pred CCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 195 QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 195 dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
||+ |+|||+++++.+.++..+ |...|++|+|||||+ +||+||.|++|+||+++..
T Consensus 290 D~~-V~iwd~~~~~~~~~~~~g-H~~~V~~v~fSpdg~---~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 290 DNS-IALVKLKDLSMSKIFKQA-HSFAITEVTISPDST---YVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp TSC-EEEEETTTTEEEEEETTS-SSSCEEEEEECTTSC---EEEEEETTSEEEEEECCTT
T ss_pred CCE-EEEEECCCCcEEEEecCc-ccCCEEEEEECCCCC---EEEEEeCCCeEEEEEcCCC
Confidence 998 699999999999887555 467899999999999 9999999999999999654
No 20
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=100.00 E-value=3.9e-33 Score=253.83 Aligned_cols=236 Identities=9% Similarity=0.054 Sum_probs=178.9
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEE----EE--eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCY----ER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~----~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~ 78 (337)
.+...|++++|+|++++++++.++.++|||+.+++... .. +...+..+++.++++.++..+ .|++|+
T Consensus 92 ~~~~~V~~~~~s~d~~~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs-------~dg~v~ 164 (357)
T 4g56_B 92 QTEAGVTDVAWVSEKGILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGG-------KDFSVK 164 (357)
T ss_dssp ECSSCEEEEEEETTTEEEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEE-------TTSCEE
T ss_pred CCCCCEEEEEEcCCCCEEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEe-------CCCeEE
Confidence 35678999999999988777766668999998876432 22 224566677777777766554 489999
Q ss_pred EEECCCCCEEEEEEcC-CceeEEEEcCCe---EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCc-cEEEE
Q 019672 79 LFNTTTGTALRELNFL-TSILAVRLNKKR---LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNA-CFLAV 152 (337)
Q Consensus 79 iwd~~~~~~~~~~~~~-~~v~~i~~~~~~---~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~ 152 (337)
+||+++++++..+..+ ..|.+++|+++. ++.+. |+.|++||+++++....+....+...+.+++++|++ .++++
T Consensus 165 iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~ 244 (357)
T 4g56_B 165 VWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFAC 244 (357)
T ss_dssp EEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEE
T ss_pred EEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEE
Confidence 9999999999888654 589999997643 44444 899999999998877776555555567777887764 56777
Q ss_pred cCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCC-CEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEE
Q 019672 153 PASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNG-MYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 226 (337)
Q Consensus 153 ~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg-~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~ 226 (337)
++ .|+.|++||+++++.. +..+|++++|+|++ ++||+|+.||+ |+|||+++++.+..+ + |...|++|+
T Consensus 245 g~--~d~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~-i~iwd~~~~~~~~~~--~-H~~~V~~va 318 (357)
T 4g56_B 245 GD--ETGNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT-VAVLDADFSEVFRDL--S-HRDFVTGVA 318 (357)
T ss_dssp EE--SSSCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC-EEEECTTSCEEEEEC--C-CSSCEEEEE
T ss_pred ee--cccceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE-EEEEECCCCcEeEEC--C-CCCCEEEEE
Confidence 66 5899999999987754 33889999999987 57999999998 699999999887655 2 466799999
Q ss_pred eec-CCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 227 FGQ-SMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 227 fs~-dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
||| |++ +|++++.||+|++|++....+
T Consensus 319 fsP~d~~---~l~s~s~Dg~v~iW~~~~~~~ 346 (357)
T 4g56_B 319 WSPLDHS---KFTTVGWDHKVLHHHLPSEGR 346 (357)
T ss_dssp ECSSSTT---EEEEEETTSCEEEEECC----
T ss_pred EeCCCCC---EEEEEcCCCeEEEEECCCCCc
Confidence 998 788 999999999999999976543
No 21
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=100.00 E-value=7e-32 Score=244.01 Aligned_cols=278 Identities=13% Similarity=0.128 Sum_probs=214.8
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
..+|..+|++++|+|+|++|++|+.++ +++||+.+++.+..... ..+..+.+.++.+.++.++ .|++|++
T Consensus 28 l~~h~~~v~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-------~dg~i~i 100 (369)
T 3zwl_B 28 LTGHERPLTQVKYNKEGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGS-------ADYSIKL 100 (369)
T ss_dssp EECCSSCEEEEEECTTSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTTEEEE
T ss_pred EEEeeceEEEEEEcCCCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEe-------CCCeEEE
Confidence 357889999999999999999998877 69999999988776654 4456666666667776655 4899999
Q ss_pred EECCCCCEEEEEEcCCceeEEEEcCCe--EEEEE-C-----CeEEEEECCCCee-----------eeeecCCCCCceEEE
Q 019672 80 FNTTTGTALRELNFLTSILAVRLNKKR--LVIVL-R-----EKTYIYDANTLAI-----------LDTIDTVPNLKGLCA 140 (337)
Q Consensus 80 wd~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~-d-----~~i~i~d~~~~~~-----------~~~~~~~~~~~~~~~ 140 (337)
||+.+++.+..+.+..+|.++.|+++. ++++. + +.|++||+..... +..+..+.....+.+
T Consensus 101 wd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (369)
T 3zwl_B 101 WDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATV 180 (369)
T ss_dssp EETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEE
T ss_pred EECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeE
Confidence 999999999999988899999998764 34444 5 8999999976532 222222333236778
Q ss_pred EeeCCCccEEEEcCCCCccEEEEEEccC-Cccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeec
Q 019672 141 FSPSLNACFLAVPASTTKGSVLVYNVME-LHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~~dg~v~i~d~~~-~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~ 214 (337)
++++|++.++++++ .+|.|++||+.+ .... +..+|.+++|+|++++|++++.||. |++||+.+++.+..+.
T Consensus 181 ~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~v~d~~~~~~~~~~~ 257 (369)
T 3zwl_B 181 AGWSTKGKYIIAGH--KDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTN-SFLVDVSTLQVLKKYE 257 (369)
T ss_dssp EEECGGGCEEEEEE--TTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE
T ss_pred EEEcCCCCEEEEEc--CCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCce-EEEEECCCCceeeeec
Confidence 88888888999887 589999999987 4432 3488999999999999999999997 6999999999988875
Q ss_pred cCCcceeEEEEEeecCCCcccEEEEEeCCC--------------cEEEEecCCCcccCCCCcccccccccccccceeecc
Q 019672 215 RGTYPSTIFSLSFGQSMQFQDILVATSSSG--------------SLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLD 280 (337)
Q Consensus 215 ~~~~~~~i~~l~fs~dg~~~~~las~s~dg--------------~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 280 (337)
+...+.+++|+|+++ ++++++.++ .+++||+.+...... + ..
T Consensus 258 ---~~~~~~~~~~~~~~~---~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~-------~----~~------- 313 (369)
T 3zwl_B 258 ---TDCPLNTAVITPLKE---FIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGR-------V----QG------- 313 (369)
T ss_dssp ---CSSCEEEEEECSSSS---EEEEEECCC-------------CEEEEEETTTCCEEEE-------E----EC-------
T ss_pred ---CCCCceeEEecCCCc---eEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhh-------e----ec-------
Confidence 345699999999999 999999998 788998876543211 0 00
Q ss_pred cccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 281 PADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
+...+..+.+.++++.|++++.||.+++|+++..
T Consensus 314 ---~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~ 347 (369)
T 3zwl_B 314 ---HFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKS 347 (369)
T ss_dssp ---CSSCEEEEEECTTSSEEEEEETTSEEEEEEECHH
T ss_pred ---ccCcEEEEEECCCCCEEEEEcCCCeEEEEECccc
Confidence 0011222334556689999999999999999754
No 22
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=100.00 E-value=8.6e-32 Score=241.36 Aligned_cols=285 Identities=12% Similarity=0.103 Sum_probs=204.0
Q ss_pred CCCCCCCeEEEEEcCC-CCEEEEEcCCc-eEEEeCCCCcE-----EEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCC
Q 019672 3 NQSSSYPVFFVSFNQD-NSGFALSTKDG-FKIFDSSTGRL-----CYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLS 73 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~d-g~~la~g~~~g-~~vw~~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (337)
+.+|.++|++++|+|+ +++|++|+.|+ ++|||+.+.+. ..... ...+..+.+.++++.++..+ .
T Consensus 34 L~GH~~~V~~v~~sp~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~s~~-------~ 106 (340)
T 4aow_A 34 LKGHNGWVTQIATTPQFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFALSGS-------W 106 (340)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEEEEE-------T
T ss_pred ECCccCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEEEEc-------c
Confidence 4579999999999998 58999998877 69999876532 22232 34566677777777766554 4
Q ss_pred CceEEEEECCCCCEEEEEEcCC-ceeEEEEcCC--eEEEEE-CCeEEEEECCCCeeee-eecCCCCCceEEEEeeCCCcc
Q 019672 74 PRRLCLFNTTTGTALRELNFLT-SILAVRLNKK--RLVIVL-REKTYIYDANTLAILD-TIDTVPNLKGLCAFSPSLNAC 148 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~-~v~~i~~~~~--~~~v~~-d~~i~i~d~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 148 (337)
|+.|++|+...+.......... .+..+.+.++ .++.+. |+.+++||+....... ....+......+++++++...
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 186 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNP 186 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSC
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCc
Confidence 9999999999888777665544 5666666543 444455 8899999997664433 233334444455666666677
Q ss_pred EEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEE
Q 019672 149 FLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIF 223 (337)
Q Consensus 149 ~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~ 223 (337)
++++++ .|+.|++||+.+.+.. |..+|++++|+|+|++||+|+.||+ |++||+.+++.+..+.. ...|.
T Consensus 187 ~~~s~~--~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~-i~iwd~~~~~~~~~~~~---~~~v~ 260 (340)
T 4aow_A 187 IIVSCG--WDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQ-AMLWDLNEGKHLYTLDG---GDIIN 260 (340)
T ss_dssp EEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCE-EEEEETTTTEEEEEEEC---SSCEE
T ss_pred EEEEEc--CCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCe-EEEEEeccCceeeeecC---CceEE
Confidence 788877 5899999999987654 3489999999999999999999998 69999999999888753 34699
Q ss_pred EEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEE
Q 019672 224 SLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVI 303 (337)
Q Consensus 224 ~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~ 303 (337)
+++|+|++. +++++.|++|+|||++............ ... ....+...+..+.+.+++++|+++
T Consensus 261 ~~~~~~~~~----~~~~~~d~~i~iwd~~~~~~~~~~~~~~--~~~----------~~~~h~~~v~~l~~s~dg~~l~sg 324 (340)
T 4aow_A 261 ALCFSPNRY----WLCAATGPSIKIWDLEGKIIVDELKQEV--IST----------SSKAEPPQCTSLAWSADGQTLFAG 324 (340)
T ss_dssp EEEECSSSS----EEEEEETTEEEEEETTTTEEEEEECCC-------------------CCCCCEEEEEECTTSSEEEEE
T ss_pred eeecCCCCc----eeeccCCCEEEEEECCCCeEEEeccccc--eee----------eccCCCCCEEEEEECCCCCEEEEE
Confidence 999999986 6667789999999997654321100000 000 000111122334456677999999
Q ss_pred EeCCcEEEEEEec
Q 019672 304 TYNGYFVEYIFSI 316 (337)
Q Consensus 304 ~~dg~~~~~~~~~ 316 (337)
+.||.|++|++.+
T Consensus 325 s~Dg~v~iW~~~t 337 (340)
T 4aow_A 325 YTDNLVRVWQVTI 337 (340)
T ss_dssp ETTSCEEEEEEEC
T ss_pred eCCCEEEEEeCCC
Confidence 9999999999875
No 23
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=3e-32 Score=252.49 Aligned_cols=232 Identities=13% Similarity=0.147 Sum_probs=189.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
..|..+|++++|+|+|++|++|+.|+ +++||+.+++.+..... +.+..+.+.++++.++..+ .|++|++|
T Consensus 147 ~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s-------~D~~i~~w 219 (410)
T 1vyh_C 147 KGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSAS-------RDKTIKMW 219 (410)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEE-------TTSEEEEE
T ss_pred eccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEe-------CCCeEEEE
Confidence 46788999999999999999999887 59999999888766544 4566667766667766554 49999999
Q ss_pred ECCCCCEEEEEEcCC-ceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCC----------
Q 019672 81 NTTTGTALRELNFLT-SILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLN---------- 146 (337)
Q Consensus 81 d~~~~~~~~~~~~~~-~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 146 (337)
|+++++++..+..+. .|.++.++++. ++.+. |+.|++||+.+++....+..+.. .+.+++++|+
T Consensus 220 d~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~ 297 (410)
T 1vyh_C 220 EVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRH--VVECISWAPESSYSSISEAT 297 (410)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECCSCGGGGGGGCC
T ss_pred ECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCc--eEEEEEEcCcccccchhhhc
Confidence 999999998887554 79999998765 34444 89999999999988888876554 4555555553
Q ss_pred ----------ccEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeE
Q 019672 147 ----------ACFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY 211 (337)
Q Consensus 147 ----------~~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~ 211 (337)
+.++++++ .||.|++||+.++... |...|++++|+|+|++|++|+.||+ |++||+.+++.+.
T Consensus 298 ~~~~~~~~~~g~~l~sgs--~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~-i~vwd~~~~~~~~ 374 (410)
T 1vyh_C 298 GSETKKSGKPGPFLLSGS--RDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKT-LRVWDYKNKRCMK 374 (410)
T ss_dssp SCC-------CCEEEEEE--TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSCEEEEETTTE-EEEECCTTSCCCE
T ss_pred cccccccCCCCCEEEEEe--CCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCceEE
Confidence 55788887 5999999999988754 4488999999999999999999997 6999999999888
Q ss_pred eeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 212 SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 212 ~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
.+.. |...|++++|+|+++ +|++|+.||+|+||+++
T Consensus 375 ~~~~--h~~~v~~l~~~~~~~---~l~sgs~D~~i~vW~~r 410 (410)
T 1vyh_C 375 TLNA--HEHFVTSLDFHKTAP---YVVTGSVDQTVKVWECR 410 (410)
T ss_dssp EEEC--CSSCEEEEEECSSSS---CEEEEETTSEEEEEC--
T ss_pred EEcC--CCCcEEEEEEcCCCC---EEEEEeCCCcEEEEeCC
Confidence 8853 456799999999999 99999999999999863
No 24
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=3.2e-32 Score=245.91 Aligned_cols=228 Identities=13% Similarity=0.132 Sum_probs=182.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc----EEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR----LCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~----~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v 77 (337)
.+...|.+++|+|+|++|++|+.++ +++|++.+.+ ....... ..+..+.+..+ +.++..+ .|++|
T Consensus 95 ~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~-~~l~s~s-------~d~~i 166 (340)
T 1got_B 95 LRSSWVMTCAYAPSGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD-NQIVTSS-------GDTTC 166 (340)
T ss_dssp CSSSCEEEEEECTTSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET-TEEEEEE-------TTSCE
T ss_pred cCCccEEEEEECCCCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC-CcEEEEE-------CCCcE
Confidence 4667899999999999999998887 5999988753 2233332 34454555433 3343333 49999
Q ss_pred EEEECCCCCEEEEEEc-CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEc
Q 019672 78 CLFNTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 78 ~iwd~~~~~~~~~~~~-~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 153 (337)
++||+++++++..+.. ...|.++.++++. ++.+. |+.|++||+++++.+..+..+.. .+.+++++|++.+++++
T Consensus 167 ~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~ 244 (340)
T 1got_B 167 ALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQTFTGHES--DINAICFFPNGNAFATG 244 (340)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSS--CEEEEEECTTSSEEEEE
T ss_pred EEEECCCCcEEEEEcCCCCceEEEEECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcCCcC--CEEEEEEcCCCCEEEEE
Confidence 9999999999888864 4589999998865 33344 89999999999988888875543 57778888889999998
Q ss_pred CCCCccEEEEEEccCCccccc-------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEE
Q 019672 154 ASTTKGSVLVYNVMELHSHCE-------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 226 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~~~-------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~ 226 (337)
+ .||.|++||+++.+.... ..|.+++|+|+|++|++|+.||+ |++||+.+++.+..+. + |...|.+++
T Consensus 245 s--~d~~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~~~-~-h~~~v~~~~ 319 (340)
T 1got_B 245 S--DDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFN-CNVWDALKADRAGVLA-G-HDNRVSCLG 319 (340)
T ss_dssp E--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE-C-CSSCEEEEE
T ss_pred c--CCCcEEEEECCCCcEEEEEccCCcccceEEEEECCCCCEEEEECCCCe-EEEEEcccCcEeeEee-c-CCCcEEEEE
Confidence 8 599999999988764321 47999999999999999999997 6999999999888875 3 456899999
Q ss_pred eecCCCcccEEEEEeCCCcEEEEe
Q 019672 227 FGQSMQFQDILVATSSSGSLHVFS 250 (337)
Q Consensus 227 fs~dg~~~~~las~s~dg~v~iw~ 250 (337)
|+|||+ +|++|+.|++|+|||
T Consensus 320 ~s~dg~---~l~s~s~D~~i~iWd 340 (340)
T 1got_B 320 VTDDGM---AVATGSWDSFLKIWN 340 (340)
T ss_dssp ECTTSS---CEEEEETTSCEEEEC
T ss_pred EcCCCC---EEEEEcCCccEEecC
Confidence 999999 999999999999996
No 25
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=100.00 E-value=6.9e-31 Score=234.76 Aligned_cols=271 Identities=13% Similarity=0.130 Sum_probs=206.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcE---EEE----EeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRL---CYE----RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v 77 (337)
.+..+|++++|+|++++|++++++.+++||+.+++. ... .+...+..+.+.++.+.++..+. |+.|
T Consensus 49 ~h~~~v~~~~~~~~~~~l~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i 121 (337)
T 1gxr_A 49 NHGEVVCAVTISNPTRHVYTGGKGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGE-------ASTL 121 (337)
T ss_dssp CCSSCCCEEEECSSSSEEEEECBSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEES-------SSEE
T ss_pred cCCCceEEEEEecCCcEEEEcCCCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcC-------CCcE
Confidence 578899999999999999999955579999987642 222 12345666777777777766553 8999
Q ss_pred EEEECCCCC--EEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEE
Q 019672 78 CLFNTTTGT--ALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (337)
Q Consensus 78 ~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 151 (337)
++||+++++ ....+. +...|.++.++++. ++++. ++.|++||+++++.+..+..+. ..+.++.++|++.+++
T Consensus 122 ~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~~--~~i~~~~~~~~~~~l~ 199 (337)
T 1gxr_A 122 SIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGHT--DGASCIDISNDGTKLW 199 (337)
T ss_dssp EEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCS--SCEEEEEECTTSSEEE
T ss_pred EEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeeccc--CceEEEEECCCCCEEE
Confidence 999999887 344444 34579999998764 44454 8899999999998888886543 3577778888888999
Q ss_pred EcCCCCccEEEEEEccCCcccc----cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEe
Q 019672 152 VPASTTKGSVLVYNVMELHSHC----EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSF 227 (337)
Q Consensus 152 ~~~~~~dg~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~f 227 (337)
+++ .||.|++||+.+++... ..++.+++|+|+|++|++++.||. |++||+.+++.. .+. .+...|.+++|
T Consensus 200 ~~~--~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-i~~~~~~~~~~~-~~~--~~~~~v~~~~~ 273 (337)
T 1gxr_A 200 TGG--LDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMESSN-VEVLHVNKPDKY-QLH--LHESCVLSLKF 273 (337)
T ss_dssp EEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETTSC-EEEEETTSSCEE-EEC--CCSSCEEEEEE
T ss_pred EEe--cCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcCCCc-EEEEECCCCCeE-EEc--CCccceeEEEE
Confidence 887 59999999999877543 388999999999999999999998 699999988764 332 24567999999
Q ss_pred ecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCC
Q 019672 228 GQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNG 307 (337)
Q Consensus 228 s~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg 307 (337)
+|+++ +|++++.||.|++||+++...... . .. +.. +..+.+.++++.|++++.||
T Consensus 274 ~~~~~---~l~~~~~dg~i~~~~~~~~~~~~~-------~-~~-~~~-------------v~~~~~s~~~~~l~~~~~dg 328 (337)
T 1gxr_A 274 AYCGK---WFVSTGKDNLLNAWRTPYGASIFQ-------S-KE-SSS-------------VLSCDISVDDKYIVTGSGDK 328 (337)
T ss_dssp CTTSS---EEEEEETTSEEEEEETTTCCEEEE-------E-EC-SSC-------------EEEEEECTTSCEEEEEETTS
T ss_pred CCCCC---EEEEecCCCcEEEEECCCCeEEEE-------e-cC-CCc-------------EEEEEECCCCCEEEEecCCC
Confidence 99999 999999999999999987643210 0 00 000 11223345568999999999
Q ss_pred cEEEEEEe
Q 019672 308 YFVEYIFS 315 (337)
Q Consensus 308 ~~~~~~~~ 315 (337)
.+++|++-
T Consensus 329 ~i~iw~~~ 336 (337)
T 1gxr_A 329 KATVYEVI 336 (337)
T ss_dssp CEEEEEEE
T ss_pred eEEEEEEe
Confidence 99999873
No 26
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=8e-32 Score=241.27 Aligned_cols=233 Identities=15% Similarity=0.181 Sum_probs=186.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|..+|++++|+|||++|++|+.|+ +++||+.+++.+..... ..+..+.+.++.+.++..+ .|++|++|
T Consensus 62 ~~h~~~v~~~~~s~dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------~D~~i~vw 134 (319)
T 3frx_A 62 KGHSHIVQDCTLTADGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGS-------RDKTIKVW 134 (319)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEE-------TTSCEEEE
T ss_pred eCCcccEEEEEECCCCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEe-------CCCeEEEE
Confidence 46888999999999999999998877 69999999988766654 4455566666666665544 49999999
Q ss_pred ECCCCCEEEEEE-cCCceeEEEEcCC--------eEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEE
Q 019672 81 NTTTGTALRELN-FLTSILAVRLNKK--------RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 81 d~~~~~~~~~~~-~~~~v~~i~~~~~--------~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (337)
|++. +++..+. +...|.++.+.+. .++.+. |+.|++||+++.+....+..+. ..+.+++++|++.+|
T Consensus 135 d~~~-~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~--~~v~~~~~sp~g~~l 211 (319)
T 3frx_A 135 TIKG-QCLATLLGHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHN--SNINTLTASPDGTLI 211 (319)
T ss_dssp ETTS-CEEEEECCCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCC--SCEEEEEECTTSSEE
T ss_pred ECCC-CeEEEEeccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCC--CcEEEEEEcCCCCEE
Confidence 9974 4555554 4558999999774 344444 8899999999998887776554 357778888899999
Q ss_pred EEcCCCCccEEEEEEccCCccccc----CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCC------cce
Q 019672 151 AVPASTTKGSVLVYNVMELHSHCE----APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT------YPS 220 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~~~~~~----~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~------~~~ 220 (337)
++++ .||.|++||+.+.+.... .+|.+++|+|+|.+|++++.++ +++|++..+..+..++... +..
T Consensus 212 ~s~~--~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~la~~~~~~--i~v~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (319)
T 3frx_A 212 ASAG--KDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNRYWLAAATATG--IKVFSLDPQYLVDDLRPEFAGYSKAAEP 287 (319)
T ss_dssp EEEE--TTCEEEEEETTTTEEEEEEECCSCEEEEEECSSSSEEEEEETTE--EEEEEETTEEEEEEECCCCTTCCGGGCC
T ss_pred EEEe--CCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCCCEEEEEcCCC--cEEEEeCcCeeeeccCccccccccCcCc
Confidence 9988 599999999998775533 7899999999999999998775 6899999887776664321 234
Q ss_pred eEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 221 TIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 221 ~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
.+.+++|||||+ +|++|+.||+|+|||+.+
T Consensus 288 ~v~~~~~spdg~---~l~sg~~Dg~i~vWd~~t 317 (319)
T 3frx_A 288 HAVSLAWSADGQ---TLFAGYTDNVIRVWQVMT 317 (319)
T ss_dssp CEEEEEECTTSS---EEEEEETTSCEEEEEEEE
T ss_pred ceeEEEECCCCC---EEEEeecCceEEEEEEee
Confidence 589999999999 999999999999999865
No 27
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=100.00 E-value=1.4e-31 Score=241.92 Aligned_cols=280 Identities=13% Similarity=0.116 Sum_probs=205.6
Q ss_pred CCCCCCeEEEEEcCC---CC--EEEEEcCCceEEEeCCCCcEEEEEee-------CCEEEEEEccCCC----EEEEEeCC
Q 019672 4 QSSSYPVFFVSFNQD---NS--GFALSTKDGFKIFDSSTGRLCYERAV-------GAFSIVEMLYSSS----LLAIVGAG 67 (337)
Q Consensus 4 ~~~~~~v~~~~fs~d---g~--~la~g~~~g~~vw~~~~~~~~~~~~~-------~~~~~~~~~~~~~----~~~~~~~g 67 (337)
..|..+|++++|+|+ +. ++++++++.+++||+.+++.+..... ..+..+++.++.+ .++..+
T Consensus 15 ~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~-- 92 (366)
T 3k26_A 15 EDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG-- 92 (366)
T ss_dssp CTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE--
T ss_pred cCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec--
Confidence 368899999999984 43 56666677789999998766543321 3466666666632 444433
Q ss_pred CCCCCCCceEEEEECCCCCEEEEEE-cCCceeEEEEcC-C--eEEEEE-CCeEEEEECCCCeeeeeecC-CCCCceEEEE
Q 019672 68 EQPSLSPRRLCLFNTTTGTALRELN-FLTSILAVRLNK-K--RLVIVL-REKTYIYDANTLAILDTIDT-VPNLKGLCAF 141 (337)
Q Consensus 68 ~~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~i~~~~-~--~~~v~~-d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~ 141 (337)
.|+.|++||+.+++.+..+. +..+|.++.|++ + .++++. |+.|++||+++++.+..+.. ..+...+.++
T Consensus 93 -----~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~ 167 (366)
T 3k26_A 93 -----SRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSA 167 (366)
T ss_dssp -----TTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEE
T ss_pred -----CCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEE
Confidence 48999999999999998887 556899999987 3 455555 88999999999988877732 2334567888
Q ss_pred eeCCCccEEEEcCCCCccEEEEEEccCCccc---------------------------------ccCceEEEEeCCCCCE
Q 019672 142 SPSLNACFLAVPASTTKGSVLVYNVMELHSH---------------------------------CEAPLAAIVLSSNGMY 188 (337)
Q Consensus 142 ~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~---------------------------------~~~~i~~~~~s~dg~~ 188 (337)
.++|++.++++++ .||.|++||+.+++.. +..+|.+++|+ +++
T Consensus 168 ~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~ 243 (366)
T 3k26_A 168 DYDLLGEKIMSCG--MDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDL 243 (366)
T ss_dssp EECTTSSEEEEEE--TTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTE
T ss_pred EECCCCCEEEEec--CCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCE
Confidence 8888899999988 4899999999876543 55889999998 779
Q ss_pred EEEEeCCCcEEEEEEcCCCce--------------eEeeccCCcceeEEEEEeecC--CCcccEEEEEeCCCcEEEEecC
Q 019672 189 IATASEQGTIIRVFLVSEATK--------------SYSFRRGTYPSTIFSLSFGQS--MQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 189 lat~s~dg~~i~vwd~~~~~~--------------~~~~~~~~~~~~i~~l~fs~d--g~~~~~las~s~dg~v~iw~l~ 252 (337)
|++++.||. |++||+.+++. +..+.. +...|.+++|+|+ ++ +|++++.||.|+|||+.
T Consensus 244 l~~~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~~~s~~~~~~---~l~~~~~dg~i~vwd~~ 317 (366)
T 3k26_A 244 ILSKSCENA-IVCWKPGKMEDDIDKIKPSESNVTILGRFDY--SQCDIWYMRFSMDFWQK---MLALGNQVGKLYVWDLE 317 (366)
T ss_dssp EEEECSSSE-EEEEEESSTTCCGGGCCTTCCCEEEEEEEEC--SSCCSSCCCCEECTTSS---EEEEECTTSCEEEEECC
T ss_pred EEEEecCCE-EEEEeCCCccccccccccCCcchheeccccc--cCCcEEEEEEcCCCCCc---EEEEEecCCcEEEEECC
Confidence 999999997 69999988754 444432 3456889999999 99 99999999999999998
Q ss_pred CCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEe
Q 019672 253 FAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFS 315 (337)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~ 315 (337)
........ .. .+... .+...+..+.+.++++.|++++.||.+++|++.
T Consensus 318 ~~~~~~~~------~~-~~~~~--------~~~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 318 VEDPHKAK------CT-TLTHH--------KCGAAIRQTSFSRDSSILIAVCDDASIWRWDRL 365 (366)
T ss_dssp SSSGGGCE------EE-EECCT--------TCCSCEEEEEECTTSSEEEEEETTSEEEEEEC-
T ss_pred CCCCcccc------ce-EEccc--------ccCCceEEEEeCCCCCeEEEEeCCCEEEEEEec
Confidence 76532210 00 00000 001112233345566899999999999999874
No 28
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=100.00 E-value=1.6e-31 Score=236.90 Aligned_cols=236 Identities=12% Similarity=0.144 Sum_probs=174.6
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCC--cEEEEEee--CCEEEEEEccC--CCEEEEEeCCCCCCCCCc
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLCYERAV--GAFSIVEMLYS--SSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~--~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~ 75 (337)
..+|..+|++++|+|+|++||+|+.|+ ++|||+++. +.+..... ..+..+++.++ ++.++.++ .|+
T Consensus 5 ~~~h~~~V~~~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s-------~D~ 77 (297)
T 2pm7_B 5 ANAHNEMIHDAVMDYYGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------YDG 77 (297)
T ss_dssp CCSCSSCEEEEEECTTSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEE-------TTT
T ss_pred ccCCcCceEEEEECCCCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEc-------CCC
Confidence 568999999999999999999999887 699998753 44444443 44555555443 45555544 499
Q ss_pred eEEEEECCCCC--EEEEEE-cCCceeEEEEcCC----eEEEEE-CCeEEEEECCCCee--eeeecCCCCCceEEEEeeCC
Q 019672 76 RLCLFNTTTGT--ALRELN-FLTSILAVRLNKK----RLVIVL-REKTYIYDANTLAI--LDTIDTVPNLKGLCAFSPSL 145 (337)
Q Consensus 76 ~v~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~----~~~v~~-d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~ 145 (337)
+|++||+++++ .+..+. +...|.++.|+++ .++++. |+.|++||+++... ...+..+ ...+.+++++|
T Consensus 78 ~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h--~~~v~~~~~~p 155 (297)
T 2pm7_B 78 KVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAH--AIGVNSASWAP 155 (297)
T ss_dssp EEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECC--SSCEEEEEECC
T ss_pred EEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecc--cCccceEeecC
Confidence 99999998874 444444 4568999999874 345555 89999999987632 2333333 33566666665
Q ss_pred C-------------ccEEEEcCCCCccEEEEEEccCCc----c-----cccCceEEEEeCCCC---CEEEEEeCCCcEEE
Q 019672 146 N-------------ACFLAVPASTTKGSVLVYNVMELH----S-----HCEAPLAAIVLSSNG---MYIATASEQGTIIR 200 (337)
Q Consensus 146 ~-------------~~~la~~~~~~dg~v~i~d~~~~~----~-----~~~~~i~~~~~s~dg---~~lat~s~dg~~i~ 200 (337)
+ +.+|++++ .|+.|++||+.+.. . .|..+|.+++|+|++ ++||+++.||+ |+
T Consensus 156 ~~~~~~~~~~~~~~~~~l~sgs--~D~~v~lwd~~~~~~~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~-v~ 232 (297)
T 2pm7_B 156 ATIEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRT-CI 232 (297)
T ss_dssp CC------------CCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EE
T ss_pred CcccccccCCCCCCcceEEEEc--CCCcEEEEEEcCCCceEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCc-EE
Confidence 4 45888887 59999999998654 1 245889999999995 89999999998 69
Q ss_pred EEEcCCCce---eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 201 VFLVSEATK---SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 201 vwd~~~~~~---~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
|||+++++. ...+....+...|.+++|+|+|+ +||+++.||+|+||+...
T Consensus 233 iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 233 IWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSC---CEEEEETTSCEEEEEECT
T ss_pred EEEeCCCCCccceeeeecccCCCcEEEEEECCCCC---EEEEEcCCCcEEEEEECC
Confidence 999987531 12222123456799999999999 999999999999999753
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.9e-31 Score=237.25 Aligned_cols=276 Identities=12% Similarity=0.118 Sum_probs=190.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCC--cEEEEE----eeCCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLCYER----AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~--~~~~~~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
.+|..+|++++|+|+ +|++|+.++ +++||+.++ +..... +...+..+++.++.+.++..+ .|++
T Consensus 11 ~~h~~~v~~~~~s~~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s-------~D~~ 81 (330)
T 2hes_X 11 KLYKEKIWSFDFSQG--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS-------FDST 81 (330)
T ss_dssp ECCSSCEEEEEEETT--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE-------TTSC
T ss_pred ccCCCceeeeccCCC--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe-------CCCc
Confidence 468899999999998 889888877 699999875 333333 234566777777777766655 4999
Q ss_pred EEEEECCCC-------CEEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCC----eeeeeecCCCCCceEEEE
Q 019672 77 LCLFNTTTG-------TALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTL----AILDTIDTVPNLKGLCAF 141 (337)
Q Consensus 77 v~iwd~~~~-------~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~----~~~~~~~~~~~~~~~~~~ 141 (337)
|+|||.+.. +++..+. |...|.+++|+++. ++.+. |++|++||++.. +.+..+..+. ..+.++
T Consensus 82 v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~--~~v~~v 159 (330)
T 2hes_X 82 VSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHS--QDVKHV 159 (330)
T ss_dssp EEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCS--SCEEEE
T ss_pred EEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCC--CceEEE
Confidence 999998532 3444454 44589999998765 44444 899999999432 3455555443 457788
Q ss_pred eeCCCccEEEEcCCCCccEEEEEEccCCc--c-----cccCceEEEEeCCC--CCEEEEEeCCCcEEEEEEcCCC-----
Q 019672 142 SPSLNACFLAVPASTTKGSVLVYNVMELH--S-----HCEAPLAAIVLSSN--GMYIATASEQGTIIRVFLVSEA----- 207 (337)
Q Consensus 142 ~~~~~~~~la~~~~~~dg~v~i~d~~~~~--~-----~~~~~i~~~~~s~d--g~~lat~s~dg~~i~vwd~~~~----- 207 (337)
.++|++.+|++++ .|++|++||+.+.. . .|..+|.+++|+|+ +.+|++|+.|++ |+|||+.++
T Consensus 160 ~~~p~~~~l~s~s--~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~-v~iw~~~~~~~~~~ 236 (330)
T 2hes_X 160 IWHPSEALLASSS--YDDTVRIWKDYDDDWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDST-VRVWKYMGDDEDDQ 236 (330)
T ss_dssp EECSSSSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSC-EEEEEEEEECTTSC
T ss_pred EECCCCCEEEEEc--CCCeEEEEECCCCCeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCe-EEEEEecCCCcccc
Confidence 8888889999988 59999999987652 2 24589999999998 779999999998 699999764
Q ss_pred ---ceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccc-cccceeeccccc
Q 019672 208 ---TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSIL-PESVNEVLDPAD 283 (337)
Q Consensus 208 ---~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~-~~~~~~~w~~~~ 283 (337)
..+..+. +.+...|++++|++++ +|++++.||+|+||++..+.... ..... ......+
T Consensus 237 ~~~~~~~~~~-~~h~~~v~~v~~s~~~----~l~s~~~dg~v~iw~~~~~~~~~--------~~~~~~~h~~~~v----- 298 (330)
T 2hes_X 237 QEWVCEAILP-DVHKRQVYNVAWGFNG----LIASVGADGVLAVYEEVDGEWKV--------FAKRALCHGVYEI----- 298 (330)
T ss_dssp EEEEEEEECC-SCCSSCEEEEEECTTS----CEEEEETTSCEEEEEEETTEEEE--------EEEESCTTTTSCE-----
T ss_pred ceeEEeeecc-cccccceEEEEEcCCC----EEEEEeCCCEEEEEEcCCCceEE--------EeccccccccceE-----
Confidence 2333332 2346679999999765 69999999999999986432100 00000 0000011
Q ss_pred ceeeeeccCCCc--ccCEEEEEEeCCcEEEEEEec
Q 019672 284 HHVLRNAFPAGV--KRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 284 ~~~~~~~~~~~~--~~~~l~~~~~dg~~~~~~~~~ 316 (337)
..+++.+ +++.|++++.||.+++|+++.
T Consensus 299 -----~~v~~~~~~~~~~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 299 -----NVVKWLELNGKTILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp -----EEEEEC-----CCEEEEETTSEEEEEEC--
T ss_pred -----EEEEEecCCCceEEEEecCCCcEEEEEecc
Confidence 1122233 347899999999999998753
No 30
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=100.00 E-value=9e-31 Score=237.91 Aligned_cols=228 Identities=12% Similarity=0.131 Sum_probs=185.0
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCC--------cEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--------RLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
+...|.+++|+|+|.+|++|+.++ +++|++... ......+...+..+.+.++...++.++. |++
T Consensus 105 ~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~-------D~~ 177 (354)
T 2pbi_B 105 PCTWVMACAYAPSGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASG-------DGT 177 (354)
T ss_dssp SSSCCCEEEECTTSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEET-------TSE
T ss_pred CCCCEEEEEECCCCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeC-------CCc
Confidence 456799999999999999999887 599987543 1223333455666777766667666554 999
Q ss_pred EEEEECCCCCEEEEEEcC-CceeEEEEcC----CeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEE
Q 019672 77 LCLFNTTTGTALRELNFL-TSILAVRLNK----KRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 77 v~iwd~~~~~~~~~~~~~-~~v~~i~~~~----~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (337)
|++||+++++++..+..+ ..|.++.+++ +.++.+. |+.|++||+++++.+..+..+.. .+.+++++|++.++
T Consensus 178 v~lwd~~~~~~~~~~~~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l 255 (354)
T 2pbi_B 178 CALWDVESGQLLQSFHGHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHES--DVNSVRYYPSGDAF 255 (354)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEE
T ss_pred EEEEeCCCCeEEEEEcCCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCC--CeEEEEEeCCCCEE
Confidence 999999999999888754 5788888865 2455555 89999999999998888876544 57777888888899
Q ss_pred EEcCCCCccEEEEEEccCCcccc-------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEE
Q 019672 151 AVPASTTKGSVLVYNVMELHSHC-------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIF 223 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~~~~~-------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~ 223 (337)
++++ .|++|++||+++.+... ...+.+++|+|+|++|++|+.||+ |+|||+.+++.+..+. + |...|.
T Consensus 256 ~s~s--~D~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~-i~vwd~~~~~~~~~l~-~-h~~~v~ 330 (354)
T 2pbi_B 256 ASGS--DDATCRLYDLRADREVAIYSKESIIFGASSVDFSLSGRLLFAGYNDYT-INVWDVLKGSRVSILF-G-HENRVS 330 (354)
T ss_dssp EEEE--TTSCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTSSEEEEEETTSC-EEEEETTTCSEEEEEC-C-CSSCEE
T ss_pred EEEe--CCCeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCCCEEEEEECCCc-EEEEECCCCceEEEEE-C-CCCcEE
Confidence 9988 59999999998765432 147899999999999999999998 6999999999888774 3 466899
Q ss_pred EEEeecCCCcccEEEEEeCCCcEEEEe
Q 019672 224 SLSFGQSMQFQDILVATSSSGSLHVFS 250 (337)
Q Consensus 224 ~l~fs~dg~~~~~las~s~dg~v~iw~ 250 (337)
+++|+|||+ +|++|+.||+|+||+
T Consensus 331 ~l~~spdg~---~l~sgs~D~~v~vW~ 354 (354)
T 2pbi_B 331 TLRVSPDGT---AFCSGSWDHTLRVWA 354 (354)
T ss_dssp EEEECTTSS---CEEEEETTSEEEEEC
T ss_pred EEEECCCCC---EEEEEcCCCCEEecC
Confidence 999999999 999999999999996
No 31
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=100.00 E-value=1.1e-31 Score=246.08 Aligned_cols=238 Identities=20% Similarity=0.265 Sum_probs=183.6
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc------EEEEEee--CCEEEEEEccC----C---CEEEEEeC
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR------LCYERAV--GAFSIVEMLYS----S---SLLAIVGA 66 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~------~~~~~~~--~~~~~~~~~~~----~---~~~~~~~~ 66 (337)
..+|..+|++++|+| ++|++|+.++ +++||+.+++ .+..... ..+..+.+.++ + +.++.++
T Consensus 12 ~~~h~~~i~~~~~~~--~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~s~~- 88 (397)
T 1sq9_A 12 GKAHDADIFSVSACN--SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVATTS- 88 (397)
T ss_dssp SSCSSSCEEEEEECS--SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEEEEE-
T ss_pred hhhhhcCeEEEEecC--CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEEEEc-
Confidence 457899999999999 7888888876 6999999887 4554443 44556666655 4 4554443
Q ss_pred CCCCCCCCceEEEEECCCCCE-----EEEEEcC------CceeEEEEc----CCe---EEEEE-CCeEEEEECCC-----
Q 019672 67 GEQPSLSPRRLCLFNTTTGTA-----LRELNFL------TSILAVRLN----KKR---LVIVL-REKTYIYDANT----- 122 (337)
Q Consensus 67 g~~~~~~d~~v~iwd~~~~~~-----~~~~~~~------~~v~~i~~~----~~~---~~v~~-d~~i~i~d~~~----- 122 (337)
.|+.|++||+.+++. +..+..+ ..|.++.|+ ++. ++++. |+.|++||+.+
T Consensus 89 ------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~ 162 (397)
T 1sq9_A 89 ------FSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADES 162 (397)
T ss_dssp ------TTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CEEEEEEETTSCEEEEEEESSSSHH
T ss_pred ------CCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCceEEEEEeCCCcEEEEeCCcccccc
Confidence 489999999998886 6666655 789999999 654 44444 88999999988
Q ss_pred -Ceeee-----eecC-----CCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc--------c---cCceEEE
Q 019672 123 -LAILD-----TIDT-----VPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH--------C---EAPLAAI 180 (337)
Q Consensus 123 -~~~~~-----~~~~-----~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~--------~---~~~i~~~ 180 (337)
++.+. .+.. ..+...+.++.++|++ ++++++ .||.|++||+.+.+.. | ..+|.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i 239 (397)
T 1sq9_A 163 NSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGF--NNGTVQISELSTLRPLYNFESQHSMINNSNSIRSV 239 (397)
T ss_dssp HHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEEC--TTSEEEEEETTTTEEEEEEECCC---CCCCCEEEE
T ss_pred ccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEe--CCCcEEEEECCCCceeEEEeccccccccCCccceE
Confidence 55554 5532 2233456677788888 888887 5999999999876542 4 6789999
Q ss_pred EeCCCCCEEEEEeCC---CcEEEEEEcCCCceeEeeccCC-----------cceeEEEEEeecCCCcccEEEEEeCCCcE
Q 019672 181 VLSSNGMYIATASEQ---GTIIRVFLVSEATKSYSFRRGT-----------YPSTIFSLSFGQSMQFQDILVATSSSGSL 246 (337)
Q Consensus 181 ~~s~dg~~lat~s~d---g~~i~vwd~~~~~~~~~~~~~~-----------~~~~i~~l~fs~dg~~~~~las~s~dg~v 246 (337)
+|+|++++|++++.| |. |++||+++++.+..+.... +...|.+++|+|+++ +|++++.||+|
T Consensus 240 ~~~~~~~~l~~~~~d~~~g~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~---~l~~~~~dg~i 315 (397)
T 1sq9_A 240 KFSPQGSLLAIAHDSNSFGC-ITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGE---TLCSAGWDGKL 315 (397)
T ss_dssp EECSSTTEEEEEEEETTEEE-EEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSSSS---EEEEEETTSEE
T ss_pred EECCCCCEEEEEecCCCCce-EEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCCCC---EEEEEeCCCeE
Confidence 999999999999999 87 6999999999888875310 456799999999999 99999999999
Q ss_pred EEEecCCCcc
Q 019672 247 HVFSPGFAIN 256 (337)
Q Consensus 247 ~iw~l~~~~~ 256 (337)
+|||+.+.+.
T Consensus 316 ~iwd~~~~~~ 325 (397)
T 1sq9_A 316 RFWDVKTKER 325 (397)
T ss_dssp EEEETTTTEE
T ss_pred EEEEcCCCce
Confidence 9999987643
No 32
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=100.00 E-value=7.4e-31 Score=252.44 Aligned_cols=268 Identities=14% Similarity=0.173 Sum_probs=201.4
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEE-EEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCY-ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
.++..+|++++|+|++++|++++.++ +++||..+.++.. ..+...+..+.+.++...++..+ .|+.|++||
T Consensus 300 ~~h~~~v~~~~~~~~~~~l~t~~~d~~i~~w~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~-------~dg~v~~~~ 372 (577)
T 2ymu_A 300 TGHSSSVWGVAFSPDGQTIASASDDKTVKLWNRNGQHLQTLTGHSSSVWGVAFSPDGQTIASAS-------DDKTVKLWN 372 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTSCEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSEEEEEE
T ss_pred ecCCCCeEEEEECCCCCEEEEEeCCCeEEEEeCCCCeeEEEeCCCCCEEEEEECCCCCEEEEEe-------CCCEEEEEc
Confidence 45788999999999999999998877 6999987654322 22234556666666677766554 489999999
Q ss_pred CCCCCEEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCC
Q 019672 82 TTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (337)
Q Consensus 82 ~~~~~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 157 (337)
. +++.+..+. +..+|.+++++++. ++++. |+.|++||. +++.+..+..+. ..+.+++++|++.++++++ .
T Consensus 373 ~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~~~~~~~~~--~~v~~~~~s~d~~~l~~~~--~ 446 (577)
T 2ymu_A 373 R-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS--SSVWGVAFSPDDQTIASAS--D 446 (577)
T ss_dssp T-TCCEEEEEECCSSCEEEEEECTTSSCEEEEETTSEEEEECT-TCCEEEEEECCS--SCEEEEEECTTSSEEEEEE--T
T ss_pred C-CCCEEEEecCCCCCeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCEEEEecCCC--CCeEEEEECCCCCEEEEEc--C
Confidence 5 566777665 45589999998764 44444 889999996 456667776544 4577788888999999988 5
Q ss_pred ccEEEEEEccCCcc----cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCc
Q 019672 158 KGSVLVYNVMELHS----HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQF 233 (337)
Q Consensus 158 dg~v~i~d~~~~~~----~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~ 233 (337)
|+.|++||...... .|..+|++++|+|||++||+++.|++ |+|||. +++.+.++.. |...|++|+|+|||+
T Consensus 447 d~~v~~w~~~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~-i~iw~~-~~~~~~~~~~--h~~~v~~l~~s~dg~- 521 (577)
T 2ymu_A 447 DKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQ- 521 (577)
T ss_dssp TSEEEEEETTSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSE-EEEEET-TSCEEEEEEC--CSSCEEEEEECTTSS-
T ss_pred CCEEEEEECCCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCE-EEEEcC-CCCEEEEEeC--CCCCEEEEEEcCCCC-
Confidence 99999999754322 24489999999999999999999997 699995 6788888753 456799999999999
Q ss_pred ccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEE
Q 019672 234 QDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYI 313 (337)
Q Consensus 234 ~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~ 313 (337)
+||+++.||+|+|||+... ... .+......+ ..+.+.+++++|++++.||.+++|+
T Consensus 522 --~l~s~~~dg~v~lwd~~~~-~~~-----------~~~~h~~~v----------~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 522 --TIASASDDKTVKLWNRNGQ-LLQ-----------TLTGHSSSV----------WGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp --CEEEEETTSEEEEECTTSC-EEE-----------EEECCSSCE----------EEEEECTTSSCEEEEETTSCEEEEC
T ss_pred --EEEEEECcCEEEEEeCCCC-EEE-----------EEcCCCCCE----------EEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 9999999999999996321 100 111111112 2334467779999999999999995
No 33
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=100.00 E-value=3.8e-31 Score=243.73 Aligned_cols=288 Identities=11% Similarity=0.118 Sum_probs=211.9
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
+..+|++++|+|++++|++|+.++ +++|| .+++.+..... ..+..+.+.++.+.++.++. |+.|++||+
T Consensus 107 ~~~~v~~~~~s~~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------d~~i~iwd~ 178 (425)
T 1r5m_A 107 TTNQVTCLAWSHDGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDV-------ENVTILWNV 178 (425)
T ss_dssp -CBCEEEEEECTTSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEET-------TCCEEEEET
T ss_pred CCCceEEEEEcCCCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEec-------CCeEEEEEC
Confidence 567999999999999999998887 69999 55666555543 45666677767777766553 899999999
Q ss_pred CCCCEEEEEEcCC-c---------------eeEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeC
Q 019672 83 TTGTALRELNFLT-S---------------ILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPS 144 (337)
Q Consensus 83 ~~~~~~~~~~~~~-~---------------v~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (337)
.+++.+..+..+. . +.++.++++..+++. ++.|++||+++++.+..+..+. ..+.+++++
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~--~~i~~~~~~ 256 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHH--GPISVLEFN 256 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCS--SCEEEEEEE
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCC--CceEEEEEC
Confidence 9999888876554 2 888888777665555 8899999999988877776544 356677777
Q ss_pred CCccEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcc
Q 019672 145 LNACFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYP 219 (337)
Q Consensus 145 ~~~~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~ 219 (337)
|++.++++++ .||.|++||+.+.+.. +..+|.+++|+|++ +|++++.||. |++||+++++.+..+.. +.
T Consensus 257 ~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~ 330 (425)
T 1r5m_A 257 DTNKLLLSAS--DDGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGS-VRLWSLKQNTLLALSIV--DG 330 (425)
T ss_dssp TTTTEEEEEE--TTSCEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSE-EEEEETTTTEEEEEEEC--TT
T ss_pred CCCCEEEEEc--CCCEEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCc-EEEEECCCCcEeEeccc--CC
Confidence 8888999887 5899999999887643 34889999999999 9999999997 69999999998887753 35
Q ss_pred eeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCc--ccccccccccccceeeccccccee--eeeccCCCc
Q 019672 220 STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGR--TSSILGSILPESVNEVLDPADHHV--LRNAFPAGV 295 (337)
Q Consensus 220 ~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~--~~~~~~~~~~~~~~~~w~~~~~~~--~~~~~~~~~ 295 (337)
..|.+++|+|+++ +|++++.||.|+|||+........... ....+. +.....+.....+.. .+..+.+.+
T Consensus 331 ~~i~~~~~s~~~~---~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~s~ 404 (425)
T 1r5m_A 331 VPIFAGRISQDGQ---KYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILN---PLPIPLYASYQSSQDNDYIFDLSWNC 404 (425)
T ss_dssp CCEEEEEECTTSS---EEEEEETTSCEEEEECHHHHC-----------------CEECCEEEEECCTTCCCCEEEEEECT
T ss_pred ccEEEEEEcCCCC---EEEEEECCCeEEEEECCCCccceeeeecccccccC---cccchhhhhhcCcccCCceEEEEccC
Confidence 5799999999999 999999999999999976542211000 000000 000000111111111 234445567
Q ss_pred ccCEEEEEEeCCcEEEEEEe
Q 019672 296 KRASVSVITYNGYFVEYIFS 315 (337)
Q Consensus 296 ~~~~l~~~~~dg~~~~~~~~ 315 (337)
++++|++++.||.+++|+++
T Consensus 405 ~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 405 AGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp TSSEEEEEESSSCCEEEECC
T ss_pred CCceEEEEecCceEEEEeec
Confidence 77899999999999999875
No 34
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=100.00 E-value=1.2e-30 Score=240.20 Aligned_cols=230 Identities=12% Similarity=0.170 Sum_probs=185.6
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 9 PVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
.|++++|+|||++|++|+.++ ++|||+++++.+..... ..+..+.+.++.+.++..+ .|++|++||++++
T Consensus 125 ~v~~v~~s~dg~~l~s~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s-------~d~~v~iwd~~~~ 197 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGS-------GDRTVRIWDLRTG 197 (393)
T ss_dssp BEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSEEEEEETTTT
T ss_pred eEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEec-------CCCcEEEEECCCC
Confidence 499999999999999999887 69999999988766544 3466666666677766554 4999999999999
Q ss_pred CEEEEEEcCCceeEEEEcC-C--eEEEEE-CCeEEEEECCCCeeeeeecC-----CCCCceEEEEeeCCCccEEEEcCCC
Q 019672 86 TALRELNFLTSILAVRLNK-K--RLVIVL-REKTYIYDANTLAILDTIDT-----VPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 86 ~~~~~~~~~~~v~~i~~~~-~--~~~v~~-d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
++...+.+...+.++.+++ + .++++. |+.|++||+++++.+..+.. ..+...+.+++++|++.++++++
T Consensus 198 ~~~~~~~~~~~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s-- 275 (393)
T 1erj_A 198 QCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS-- 275 (393)
T ss_dssp EEEEEEECSSCEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE--
T ss_pred eeEEEEEcCCCcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEe--
Confidence 9998888888999999986 3 344444 89999999999887766632 12345678888889999999988
Q ss_pred CccEEEEEEccCCcc-----------------cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcc
Q 019672 157 TKGSVLVYNVMELHS-----------------HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYP 219 (337)
Q Consensus 157 ~dg~v~i~d~~~~~~-----------------~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~ 219 (337)
.||.|++||+.+... .|...|.+++|+|++++|++|+.||+ |++||+.+++.+..+. + |.
T Consensus 276 ~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~-v~iwd~~~~~~~~~l~-~-h~ 352 (393)
T 1erj_A 276 LDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRG-VLFWDKKSGNPLLMLQ-G-HR 352 (393)
T ss_dssp TTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSE-EEEEETTTCCEEEEEE-C-CS
T ss_pred CCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCe-EEEEECCCCeEEEEEC-C-CC
Confidence 599999999976421 13477999999999999999999997 6999999999988875 3 45
Q ss_pred eeEEEEEeec------CCCcccEEEEEeCCCcEEEEecCC
Q 019672 220 STIFSLSFGQ------SMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 220 ~~i~~l~fs~------dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
..|.+++|+| +++ +|++|+.||+|+||+++.
T Consensus 353 ~~v~~v~~~~~~~~~p~~~---~l~sgs~Dg~i~iW~~~~ 389 (393)
T 1erj_A 353 NSVISVAVANGSSLGPEYN---VFATGSGDCKARIWKYKK 389 (393)
T ss_dssp SCEEEEEECSSCTTCTTCE---EEEEEETTSEEEEEEEEE
T ss_pred CCEEEEEecCCcCcCCCCC---EEEEECCCCcEEECcccc
Confidence 6799999886 677 999999999999999864
No 35
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=100.00 E-value=5e-32 Score=252.20 Aligned_cols=240 Identities=15% Similarity=0.258 Sum_probs=182.8
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-eEEEeCCC---Cc---EEEE-EeeCCEEEEEEccCCCEEEEEeCCCCCCCCC
Q 019672 4 QSSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSST---GR---LCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (337)
Q Consensus 4 ~~~~~~v~~~~fs~-dg~~la~g~~~g-~~vw~~~~---~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (337)
..|.++|++++|+| ++++|++|+.++ ++|||+.+ +. .... .+...+..+++.++.+.++.++ .|
T Consensus 60 ~~h~~~V~~~~~s~~~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------~d 132 (437)
T 3gre_A 60 ENEPNSITSSAVSPGETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSS-------KD 132 (437)
T ss_dssp TTTTSCEEEEEEECSSSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEE-------TT
T ss_pred cCCCCceEEEEECCCCCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEe-------CC
Confidence 46789999999999 999999999887 59999866 32 2222 2345677777777677766655 49
Q ss_pred ceEEEEECC---CCCEEEEEE-------------cCCceeEEE--EcCC--eEEEEE-CCeEEEEECCCCeeeeeecCCC
Q 019672 75 RRLCLFNTT---TGTALRELN-------------FLTSILAVR--LNKK--RLVIVL-REKTYIYDANTLAILDTIDTVP 133 (337)
Q Consensus 75 ~~v~iwd~~---~~~~~~~~~-------------~~~~v~~i~--~~~~--~~~v~~-d~~i~i~d~~~~~~~~~~~~~~ 133 (337)
++|++||++ +++.+.... ....+.++. ++++ .++++. |+.|++||+++++.+..+..+.
T Consensus 133 g~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 212 (437)
T 3gre_A 133 GQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIENSP 212 (437)
T ss_dssp SEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEECCG
T ss_pred CEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEccCC
Confidence 999999994 565554332 233455555 2333 344444 8999999999999988887643
Q ss_pred CCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcccc------cCceEEEE----eCCCCCEEEEEeCCCcEEEEEE
Q 019672 134 NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHC------EAPLAAIV----LSSNGMYIATASEQGTIIRVFL 203 (337)
Q Consensus 134 ~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~------~~~i~~~~----~s~dg~~lat~s~dg~~i~vwd 203 (337)
+...+.+++++|++.++++++ .||.|++||+++++... ..+|.+++ |+|++.+|++|+.||+ |+|||
T Consensus 213 h~~~v~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~-i~iwd 289 (437)
T 3gre_A 213 RHGAVSSICIDEECCVLILGT--TRGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTF-LTIWN 289 (437)
T ss_dssp GGCCEEEEEECTTSCEEEEEE--TTSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEE-EEEEE
T ss_pred CCCceEEEEECCCCCEEEEEc--CCCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCc-EEEEE
Confidence 445788888889999999988 59999999999876543 36899994 4567889999999997 69999
Q ss_pred cCCCceeEeeccCC------------------------cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCccc
Q 019672 204 VSEATKSYSFRRGT------------------------YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQ 257 (337)
Q Consensus 204 ~~~~~~~~~~~~~~------------------------~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~ 257 (337)
+.+++.+..+..+. +...|.+++|+ +++ +|++|+.||+|++||+.+++..
T Consensus 290 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~---~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 290 FVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDK---ILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp TTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTE---EEEEEGGGTEEEEEETTCGGGC
T ss_pred cCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cce---EEEecCCCCeEEEEECCCcccc
Confidence 99999887775221 34458999999 777 9999999999999999876643
No 36
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.6e-31 Score=238.01 Aligned_cols=299 Identities=11% Similarity=0.176 Sum_probs=205.0
Q ss_pred CCCCCCeEEEEEcCCCCEE-EEEcC---Cc-eEEEeCCCCcEEEE---EeeCCEEEEEEccC---CCEEEEEeCCCCCCC
Q 019672 4 QSSSYPVFFVSFNQDNSGF-ALSTK---DG-FKIFDSSTGRLCYE---RAVGAFSIVEMLYS---SSLLAIVGAGEQPSL 72 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~l-a~g~~---~g-~~vw~~~~~~~~~~---~~~~~~~~~~~~~~---~~~~~~~~~g~~~~~ 72 (337)
.+|..+|++++|+|++..+ ++|+. ++ +++||+.+++.... .+...+..+.+.++ .+.++..+
T Consensus 15 ~~h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~------- 87 (357)
T 3i2n_A 15 KGFNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGD------- 87 (357)
T ss_dssp EECSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEE-------
T ss_pred cCCCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEec-------
Confidence 3588899999999999765 56654 55 69999998876432 22345666666655 35555444
Q ss_pred CCceEEEEECCCCC-EEEEEE-cCCceeEEEE------cCC--eEEEEE-CCeEEEEECCCCe-eeeeecCCCC--CceE
Q 019672 73 SPRRLCLFNTTTGT-ALRELN-FLTSILAVRL------NKK--RLVIVL-REKTYIYDANTLA-ILDTIDTVPN--LKGL 138 (337)
Q Consensus 73 ~d~~v~iwd~~~~~-~~~~~~-~~~~v~~i~~------~~~--~~~v~~-d~~i~i~d~~~~~-~~~~~~~~~~--~~~~ 138 (337)
.|+.|++||+.+++ ++..+. +...|.++.+ +++ .++++. |+.|++||+++++ .+..+..+.. ...+
T Consensus 88 ~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v 167 (357)
T 3i2n_A 88 FGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDC 167 (357)
T ss_dssp TTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCE
T ss_pred CCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCce
Confidence 48999999999887 777765 4457999865 333 455555 8899999998876 5666654332 2245
Q ss_pred EEEe----eCCCccEEEEcCCCCccEEEEEEccCCccc----ccCceEEEEeCC---CCCEEEEEeCCCcEEEEEEcCCC
Q 019672 139 CAFS----PSLNACFLAVPASTTKGSVLVYNVMELHSH----CEAPLAAIVLSS---NGMYIATASEQGTIIRVFLVSEA 207 (337)
Q Consensus 139 ~~~~----~~~~~~~la~~~~~~dg~v~i~d~~~~~~~----~~~~i~~~~~s~---dg~~lat~s~dg~~i~vwd~~~~ 207 (337)
.++. +++++.++++++ .||.|++||+++++.. +..+|.+++|+| ++++|++++.||. |++||++++
T Consensus 168 ~~~~~~~~~~~~~~~l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~ 244 (357)
T 3i2n_A 168 WTVAFGNAYNQEERVVCAGY--DNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKDISMNKLVATSLEGK-FHVFDMRTQ 244 (357)
T ss_dssp EEEEEECCCC-CCCEEEEEE--TTSEEEEEETTTTEEEEEEECSSCEEEEEESCSSSSCCEEEEEESTTE-EEEEEEEEE
T ss_pred EEEEEEeccCCCCCEEEEEc--cCCeEEEEECccCceeeecCCCCceEEEEcCCCCCCCCEEEEECCCCe-EEEEeCcCC
Confidence 5555 567888999887 5899999999987754 348999999999 9999999999997 699999887
Q ss_pred ceeEeec---cCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccc
Q 019672 208 TKSYSFR---RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADH 284 (337)
Q Consensus 208 ~~~~~~~---~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 284 (337)
+.+..+. ...+...|++++|+|+++ .+|++++.||.|+|||++...............+ . +.....+.....+
T Consensus 245 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~-~-~~~~~~~~~~~~~ 320 (357)
T 3i2n_A 245 HPTKGFASVSEKAHKSTVWQVRHLPQNR--ELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMG-V-AGSVSLLQNVTLS 320 (357)
T ss_dssp ETTTEEEEEEEECCSSCEEEEEEETTEE--EEEEEEETTSEEEEEEEECCSCC--CCTTSCCCC-C-CCEEEEEEEEECC
T ss_pred CcccceeeeccCCCcCCEEEEEECCCCC--cEEEEEeCCCcEEEeecCCCcccccccCCCCccc-c-ccccceeeccccC
Confidence 6654442 112456799999999986 3699999999999999987654321111000000 0 0000111111112
Q ss_pred eeeeeccCCCcccCEEE-EEEeCCcEEEEEEec
Q 019672 285 HVLRNAFPAGVKRASVS-VITYNGYFVEYIFSI 316 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~-~~~~dg~~~~~~~~~ 316 (337)
...+..+.+.++++.|+ +++.||.+++|++..
T Consensus 321 ~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~ 353 (357)
T 3i2n_A 321 TQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTK 353 (357)
T ss_dssp SSCEEEEEECSSSTTEEEEEETTSEEEEEEECC
T ss_pred CCCeeEEEEcCCCCeEEEEecCCCcEEEEECCC
Confidence 22233445566778888 799999999999864
No 37
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-32 Score=250.12 Aligned_cols=298 Identities=9% Similarity=0.057 Sum_probs=211.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCC----CcEEEEEee--CCEEEEEEccC-CCEEEEEeCCCCCCCCCce
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSST----GRLCYERAV--GAFSIVEMLYS-SSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~----~~~~~~~~~--~~~~~~~~~~~-~~~~~~~~~g~~~~~~d~~ 76 (337)
.+..+|++++|+|++++|++|+.++ +++||+.+ .+.+..... ..+..+.+.++ .+.++..+ .|++
T Consensus 65 ~~~~~v~~~~~s~~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~dg~ 137 (416)
T 2pm9_A 65 QVDSKFNDLDWSHNNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGG-------NNGE 137 (416)
T ss_dssp CCSSCEEEEEECSSSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEEC-------SSSC
T ss_pred ecCCceEEEEECCCCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEc-------CCCe
Confidence 4678899999999999999998876 69999987 345544433 44556666665 55555443 4899
Q ss_pred EEEEECCCCC------EEEEE----EcCCceeEEEEcCC--eEEE-EE-CCeEEEEECCCCeeeeeecCCCC----CceE
Q 019672 77 LCLFNTTTGT------ALREL----NFLTSILAVRLNKK--RLVI-VL-REKTYIYDANTLAILDTIDTVPN----LKGL 138 (337)
Q Consensus 77 v~iwd~~~~~------~~~~~----~~~~~v~~i~~~~~--~~~v-~~-d~~i~i~d~~~~~~~~~~~~~~~----~~~~ 138 (337)
|++||+.+++ ....+ .+...|.++.|+++ .+++ +. |+.|++||+++++.+..+..+.. ...+
T Consensus 138 v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v 217 (416)
T 2pm9_A 138 IFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQL 217 (416)
T ss_dssp EEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCE
T ss_pred EEEEECCCCccccccccccccccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCce
Confidence 9999999886 33322 34568999999876 3333 33 88999999999988888765421 3457
Q ss_pred EEEeeCCCc-cEEEEcCCCCcc---EEEEEEccCCcc-------cccCceEEEEeCC-CCCEEEEEeCCCcEEEEEEcCC
Q 019672 139 CAFSPSLNA-CFLAVPASTTKG---SVLVYNVMELHS-------HCEAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSE 206 (337)
Q Consensus 139 ~~~~~~~~~-~~la~~~~~~dg---~v~i~d~~~~~~-------~~~~~i~~~~~s~-dg~~lat~s~dg~~i~vwd~~~ 206 (337)
.+++++|++ .++++++ .++ .|++||+++... .|..+|.+++|+| ++++|++++.||+ |++||+++
T Consensus 218 ~~~~~~~~~~~~l~~~~--~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~-v~~wd~~~ 294 (416)
T 2pm9_A 218 SVVEWHPKNSTRVATAT--GSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNT-VLLWNPES 294 (416)
T ss_dssp EEEEECSSCTTEEEEEE--CCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSE-EEEECSSS
T ss_pred EEEEECCCCCCEEEEEE--CCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCC-EEEeeCCC
Confidence 777888876 5777776 477 999999987531 2458899999999 9999999999997 69999999
Q ss_pred CceeEeeccCCcceeEEEEEeecCC-CcccEEEEEeCCCcEEEEecCCCcccCCCCc--------cccccc--c---ccc
Q 019672 207 ATKSYSFRRGTYPSTIFSLSFGQSM-QFQDILVATSSSGSLHVFSPGFAINQRRGGR--------TSSILG--S---ILP 272 (337)
Q Consensus 207 ~~~~~~~~~~~~~~~i~~l~fs~dg-~~~~~las~s~dg~v~iw~l~~~~~~~~~~~--------~~~~~~--~---~~~ 272 (337)
++.+.++.. +...|.+++|+|++ . +|++++.||+|+||++........... ...++. . ..+
T Consensus 295 ~~~~~~~~~--~~~~v~~~~~s~~~~~---~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 369 (416)
T 2pm9_A 295 AEQLSQFPA--RGNWCFKTKFAPEAPD---LFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKE 369 (416)
T ss_dssp CCEEEEEEC--SSSCCCCEEECTTCTT---EEEECCSSSEEEEEESCCCCCSSCC----------------------CCS
T ss_pred CccceeecC--CCCceEEEEECCCCCC---EEEEEecCCcEEEEEccCCCCCcccccccccccCCccccccccccccccc
Confidence 999888853 35679999999999 7 999999999999999987654332110 000000 0 000
Q ss_pred ccceeeccc-ccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 273 ESVNEVLDP-ADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 273 ~~~~~~w~~-~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
....-.|.. ..+...+..+.++++++.|++++.||.|++|++.++
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~s~dg~~la~~~~d~~v~~w~~~~~ 415 (416)
T 2pm9_A 370 KPSVFHLQAPTWYGEPSPAAHWAFGGKLVQITPDGKGVSITNPKIS 415 (416)
T ss_dssp CCCSSCCCCCSTTCCCSCCCEEETTTEEECBCTTSSCBCCBCCCCC
T ss_pred ccccccccCCccccCCccceEEeeCCeEEEEeCCCCeEEEEEeccC
Confidence 000001100 001112234456778899999999999999998765
No 38
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=100.00 E-value=8e-31 Score=239.86 Aligned_cols=274 Identities=8% Similarity=-0.007 Sum_probs=194.5
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCc-eEEEeCCCCcEEEEEe----eCCEEEEEEcc-CCCEEEEEeCCCCCCCCCce
Q 019672 4 QSSSYPVFFVSFNQDN-SGFALSTKDG-FKIFDSSTGRLCYERA----VGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg-~~la~g~~~g-~~vw~~~~~~~~~~~~----~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~ 76 (337)
.++..+|++++|+|++ ++|++|+.++ ++|||+.+++...... ...+..+++.+ +.+.++.++ .|++
T Consensus 70 ~~h~~~v~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~-------~d~~ 142 (383)
T 3ei3_B 70 SPFDRRVTSLEWHPTHPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS-------IRGA 142 (383)
T ss_dssp CCCSSCEEEEEECSSCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE-------TTTE
T ss_pred cCCCCCEEEEEECCCCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe-------CCCE
Confidence 4678999999999999 8999998877 6999999887665543 23445555544 234444433 4999
Q ss_pred EEEEECCCCCEEEEEEc-C---CceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCcc-
Q 019672 77 LCLFNTTTGTALRELNF-L---TSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNAC- 148 (337)
Q Consensus 77 v~iwd~~~~~~~~~~~~-~---~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 148 (337)
|++||+++ +.+..+.. . ..|.+++++++. ++++. |+.|++||+ +++.+..+..+. ..+.+++++|++.
T Consensus 143 i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~--~~v~~~~~~~~~~~ 218 (383)
T 3ei3_B 143 TTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHK--AKVTHAEFNPRCDW 218 (383)
T ss_dssp EEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSS--SCEEEEEECSSCTT
T ss_pred EEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCC--CcEEEEEECCCCCC
Confidence 99999986 44554432 2 469999998754 44444 889999999 466777776544 4577788888887
Q ss_pred EEEEcCCCCccEEEEEEccCC----ccc----ccCceEEEEeCC-CCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCc-
Q 019672 149 FLAVPASTTKGSVLVYNVMEL----HSH----CEAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY- 218 (337)
Q Consensus 149 ~la~~~~~~dg~v~i~d~~~~----~~~----~~~~i~~~~~s~-dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~- 218 (337)
++++++ .|+.|++||+.+. ... +..+|.+++|+| +|++|++++.||. |++||+++++.+..+.....
T Consensus 219 ~l~s~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~~~~~d~~-i~iwd~~~~~~~~~~~~~~~~ 295 (383)
T 3ei3_B 219 LMATSS--VDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLLTTDQRNE-IRVYSSYDWSKPDQIIIHPHR 295 (383)
T ss_dssp EEEEEE--TTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEEEEESSSE-EEEEETTBTTSCSEEEECCBC
T ss_pred EEEEEe--CCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEEEEcCCCc-EEEEECCCCcccccccccccc
Confidence 788877 5999999999873 222 348999999999 9999999999997 69999999887665542110
Q ss_pred --------------ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccc
Q 019672 219 --------------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADH 284 (337)
Q Consensus 219 --------------~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 284 (337)
...+..++|+|||+ + +++.||+|+|||+.+++..... .+......
T Consensus 296 ~~~~~~~~~~~~~p~~~~~~~~~s~dg~---~--s~s~d~~i~iwd~~~~~~~~~l------~~~~~~~~---------- 354 (383)
T 3ei3_B 296 QFQHLTPIKATWHPMYDLIVAGRYPDDQ---L--LLNDKRTIDIYDANSGGLVHQL------RDPNAAGI---------- 354 (383)
T ss_dssp CCTTSCCCCCEECSSSSEEEEECBCCTT---T--CTTCCCCEEEEETTTCCEEEEE------CBTTBCSC----------
T ss_pred ccccccceEEeccCCCCceEEEecCCcc---c--ccCCCCeEEEEecCCCceeeee------cCCCCCce----------
Confidence 12355688888888 5 8899999999999876542210 00000001
Q ss_pred eeeeeccCCCcccCEEEEEEeCCcEEEEEEec
Q 019672 285 HVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~ 316 (337)
...+.+.++++.|++++ ||.+++|+++.
T Consensus 355 ---~~~~~~s~~g~~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 355 ---ISLNKFSPTGDVLASGM-GFNILIWNRED 382 (383)
T ss_dssp ---CCEEEECTTSSEEEEEE-TTEEEEEECC-
T ss_pred ---EEEEEEecCccEEEEec-CCcEEEEecCC
Confidence 11122345557888885 99999999864
No 39
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=100.00 E-value=1.8e-30 Score=255.96 Aligned_cols=293 Identities=11% Similarity=0.082 Sum_probs=203.3
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCc-eEEEeCCCCc-----EEEEE--eeCCEEEEEEccCCCEEEEEeCCCCCCCCC
Q 019672 4 QSSSYPVFFVSFNQDN-SGFALSTKDG-FKIFDSSTGR-----LCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg-~~la~g~~~g-~~vw~~~~~~-----~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (337)
..|...|++++|+|++ ++|++|+.|+ +++|++.+.. ..... +.+.+..+.+.++++.++..+ .|
T Consensus 379 ~~H~~~V~~v~~~~~~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs-------~D 451 (694)
T 3dm0_A 379 RAHTDMVTAIATPIDNADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGS-------WD 451 (694)
T ss_dssp ECCSSCEEEEECCTTCCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEE-------TT
T ss_pred ccCCceeEEEEecCCCCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEe-------CC
Confidence 4789999999999875 6889998877 6999987642 22223 334566677777777766554 49
Q ss_pred ceEEEEECCCCCEEEEEEc-CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecC-CCCCceEEEEeeCCCc--
Q 019672 75 RRLCLFNTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDT-VPNLKGLCAFSPSLNA-- 147 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~-~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-- 147 (337)
++|+|||+.+++.+..+.. ...|.++.|+++. ++.++ |++|++||+........... ..+...+.++.++|++
T Consensus 452 g~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~ 531 (694)
T 3dm0_A 452 GELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQ 531 (694)
T ss_dssp SEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSS
T ss_pred CcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCc
Confidence 9999999999998888764 4589999998764 45555 89999999865543322211 1233446666666654
Q ss_pred cEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeE
Q 019672 148 CFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTI 222 (337)
Q Consensus 148 ~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i 222 (337)
..+++++ .|+.|++||+.+.+.. |...|++++|+|+|++|++|+.||+ |+|||+.+++.+..+.. ...|
T Consensus 532 ~~l~s~s--~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~-i~iwd~~~~~~~~~~~~---~~~v 605 (694)
T 3dm0_A 532 PTIVSAS--WDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGV-VLLWDLAEGKKLYSLEA---NSVI 605 (694)
T ss_dssp CEEEEEE--TTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSB-CEEEETTTTEEEECCBC---SSCE
T ss_pred ceEEEEe--CCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCe-EEEEECCCCceEEEecC---CCcE
Confidence 5788877 5999999999887653 4588999999999999999999998 69999999998877743 3469
Q ss_pred EEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEE
Q 019672 223 FSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSV 302 (337)
Q Consensus 223 ~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~ 302 (337)
.+++|+|++. +|++++ ++.|+|||+++.................. .... .-...........+.+.+++++|++
T Consensus 606 ~~~~~sp~~~---~l~~~~-~~~i~iwd~~~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~l~~spdg~~l~s 679 (694)
T 3dm0_A 606 HALCFSPNRY---WLCAAT-EHGIKIWDLESKSIVEDLKVDLKAEAEKA-DNSG-PAATKRKVIYCTSLNWSADGSTLFS 679 (694)
T ss_dssp EEEEECSSSS---EEEEEE-TTEEEEEETTTTEEEEEECCCCC------------------CCCCEEEEEECTTSSEEEE
T ss_pred EEEEEcCCCc---EEEEEc-CCCEEEEECCCCCChhhhccccccccccc-cccc-cccCCceeEEeeeEEEcCCCCEEEE
Confidence 9999999998 776665 56699999987643221000000000000 0000 0000000011234456778899999
Q ss_pred EEeCCcEEEEEEe
Q 019672 303 ITYNGYFVEYIFS 315 (337)
Q Consensus 303 ~~~dg~~~~~~~~ 315 (337)
++.||.|++|++.
T Consensus 680 gs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 680 GYTDGVIRVWGIG 692 (694)
T ss_dssp EETTSEEEEEEC-
T ss_pred EcCCCeEEEEecc
Confidence 9999999999874
No 40
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=2.5e-30 Score=229.88 Aligned_cols=240 Identities=10% Similarity=0.096 Sum_probs=184.3
Q ss_pred EEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC-CceeEEEEcCC--eEEEEE-CCeEE
Q 019672 41 CYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-TSILAVRLNKK--RLVIVL-REKTY 116 (337)
Q Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~~i~~~~~--~~~v~~-d~~i~ 116 (337)
.+..+...+..+++.++.+.++..+. |++|++||+++++.+..+..+ .+|.++.|+++ .++++. |+.|+
T Consensus 8 ~~~~h~~~V~~~~fsp~~~~l~s~~~-------dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~ 80 (304)
T 2ynn_A 8 TFSNRSDRVKGIDFHPTEPWVLTTLY-------SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIR 80 (304)
T ss_dssp EEEEECSCEEEEEECSSSSEEEEEET-------TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEE
T ss_pred eecCCCCceEEEEECCCCCEEEEEcC-------CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEE
Confidence 34445567788888888887766554 999999999999998888755 47999999765 455555 88999
Q ss_pred EEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc------cccCceEEEEeCC-CCCEE
Q 019672 117 IYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS------HCEAPLAAIVLSS-NGMYI 189 (337)
Q Consensus 117 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~------~~~~~i~~~~~s~-dg~~l 189 (337)
+||+.+++.+..+..+.. .+.+++++|++.++++++ .||+|++||+.+... .|..+|.+++|+| ++.+|
T Consensus 81 vwd~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 156 (304)
T 2ynn_A 81 VFNYNTGEKVVDFEAHPD--YIRSIAVHPTKPYVLSGS--DDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTF 156 (304)
T ss_dssp EEETTTCCEEEEEECCSS--CEEEEEECSSSSEEEEEE--TTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEE
T ss_pred EEECCCCcEEEEEeCCCC--cEEEEEEcCCCCEEEEEC--CCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEE
Confidence 999999998888876544 577788888889999988 599999999987632 2458899999999 68899
Q ss_pred EEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeec--CCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccc
Q 019672 190 ATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ--SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSIL 267 (337)
Q Consensus 190 at~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~--dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~ 267 (337)
|+|+.||+ |++||+.+++....+..+ +...+..++|+| +++ +|++|+.|++|+|||+++......
T Consensus 157 ~sgs~D~~-v~iwd~~~~~~~~~~~~~-~~~~v~~~~~~~~~~~~---~l~s~s~D~~i~iWd~~~~~~~~~-------- 223 (304)
T 2ynn_A 157 ASGCLDRT-VKVWSLGQSTPNFTLTTG-QERGVNYVDYYPLPDKP---YMITASDDLTIKIWDYQTKSCVAT-------- 223 (304)
T ss_dssp EEEETTSE-EEEEETTCSSCSEEEECC-CTTCEEEEEECCSTTCC---EEEEEETTSEEEEEETTTTEEEEE--------
T ss_pred EEEeCCCe-EEEEECCCCCccceeccC-CcCcEEEEEEEEcCCCC---EEEEEcCCCeEEEEeCCCCcccee--------
Confidence 99999998 699999988776666443 345688888886 777 999999999999999976543211
Q ss_pred cccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 268 GSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 268 ~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
+.. +...+..+.+.++++.|++++.||.+++|++.+.
T Consensus 224 ---~~~----------h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~ 260 (304)
T 2ynn_A 224 ---LEG----------HMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTY 260 (304)
T ss_dssp ---EEC----------CSSCEEEEEECSSSSEEEEEETTSCEEEEETTTC
T ss_pred ---eCC----------CCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCC
Confidence 000 1111122334556689999999999999987543
No 41
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=100.00 E-value=2.9e-30 Score=234.24 Aligned_cols=232 Identities=13% Similarity=0.099 Sum_probs=183.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc--EEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR--LCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
.+..+|++++|+|++++|++|+.++ +++||+++++ .+..... ..+..+.+.++.+.++..+. |+.|++
T Consensus 6 ~~~~~i~~~~~s~~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~-------dg~i~v 78 (372)
T 1k8k_C 6 FLVEPISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGT-------DRNAYV 78 (372)
T ss_dssp SCSSCCCEEEECTTSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEET-------TSCEEE
T ss_pred ccCCCeEEEEECCCCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcC-------CCeEEE
Confidence 4778999999999999999997766 6999999886 5555433 45666777777777776554 899999
Q ss_pred EECCCCCEEEEEE---cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCee---eeeecCCCCCceEEEEeeCCCccEE
Q 019672 80 FNTTTGTALRELN---FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAI---LDTIDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 80 wd~~~~~~~~~~~---~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l 150 (337)
||+++++...... +...|.++.|+++. ++++. ++.|++||+...+. ...+. ..+...+.++.++|++.++
T Consensus 79 wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~-~~~~~~i~~~~~~~~~~~l 157 (372)
T 1k8k_C 79 WTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIK-KPIRSTVLSLDWHPNSVLL 157 (372)
T ss_dssp EEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEEC-TTCCSCEEEEEECTTSSEE
T ss_pred EECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeee-cccCCCeeEEEEcCCCCEE
Confidence 9999887655543 45689999998764 44444 88999999987652 23332 2334567888888889999
Q ss_pred EEcCCCCccEEEEEEcc------------------CCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCC
Q 019672 151 AVPASTTKGSVLVYNVM------------------ELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEA 207 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~------------------~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~ 207 (337)
++++ .||.|++||+. .++.. +..+|.+++|+|+|++|++++.||. |++||++++
T Consensus 158 ~~~~--~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~-i~i~d~~~~ 234 (372)
T 1k8k_C 158 AAGS--CDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDST-VCLADADKK 234 (372)
T ss_dssp EEEE--TTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTE-EEEEEGGGT
T ss_pred EEEc--CCCCEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCE-EEEEECCCC
Confidence 9887 58999999964 33322 3378999999999999999999997 699999999
Q ss_pred ceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 208 TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 208 ~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
+.+..+.. +...|.+++|+|+++ +|++| .|+.|++|++..
T Consensus 235 ~~~~~~~~--~~~~v~~~~~~~~~~---~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 235 MAVATLAS--ETLPLLAVTFITESS---LVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp TEEEEEEC--SSCCEEEEEEEETTE---EEEEE-TTSSCEEEEEET
T ss_pred ceeEEEcc--CCCCeEEEEEecCCC---EEEEE-eCCeEEEEEccC
Confidence 99888863 355799999999998 78777 899999999976
No 42
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=100.00 E-value=4.4e-30 Score=235.53 Aligned_cols=237 Identities=12% Similarity=0.135 Sum_probs=184.7
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-eEEEeCCCCcEEEEE---------------eeCCEEEEEEcc-CCCEEEEEe
Q 019672 4 QSSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRLCYER---------------AVGAFSIVEMLY-SSSLLAIVG 65 (337)
Q Consensus 4 ~~~~~~v~~~~fs~-dg~~la~g~~~g-~~vw~~~~~~~~~~~---------------~~~~~~~~~~~~-~~~~~~~~~ 65 (337)
..|..+|++++|+| ++++|++|+.++ +++||+.+++..... +...+..+.+.+ +.+.++.++
T Consensus 40 ~~h~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 40 RIHGGGINTLDIEPVEGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred eccCCcEEEEEEecCCCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 46889999999999 999999999887 699999887542211 334566666666 445555544
Q ss_pred CCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEEcCC-----eEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEE
Q 019672 66 AGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKK-----RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLC 139 (337)
Q Consensus 66 ~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~-----~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~ 139 (337)
.|+.|++||+.+++.+..+.+...+.++.+.+. .++++. ++.|++||+++++.+..+..+.. .+.
T Consensus 120 -------~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~--~v~ 190 (408)
T 4a11_B 120 -------FDKTLKVWDTNTLQTADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQ--EIL 190 (408)
T ss_dssp -------TTSEEEEEETTTTEEEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCS--CEE
T ss_pred -------CCCeEEEeeCCCCccceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCC--cEE
Confidence 489999999999999999998889999998753 344444 88999999999988888765443 577
Q ss_pred EEeeCCCcc-EEEEcCCCCccEEEEEEccCCc---------------------ccccCceEEEEeCCCCCEEEEEeCCCc
Q 019672 140 AFSPSLNAC-FLAVPASTTKGSVLVYNVMELH---------------------SHCEAPLAAIVLSSNGMYIATASEQGT 197 (337)
Q Consensus 140 ~~~~~~~~~-~la~~~~~~dg~v~i~d~~~~~---------------------~~~~~~i~~~~~s~dg~~lat~s~dg~ 197 (337)
+++++|++. ++++++ .||.|++||+++.. ..+..+|.+++|+|+|++|++++.||.
T Consensus 191 ~~~~~~~~~~ll~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~ 268 (408)
T 4a11_B 191 AVSWSPRYDYILATAS--ADSRVKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNR 268 (408)
T ss_dssp EEEECSSCTTEEEEEE--TTSCEEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEEECCCCCcEEEEEc--CCCcEEEEECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCe
Confidence 777888877 477776 59999999997654 234488999999999999999999998
Q ss_pred EEEEEEcCCCcee-----------------------------------------------EeeccCCcceeEEEEEeecC
Q 019672 198 IIRVFLVSEATKS-----------------------------------------------YSFRRGTYPSTIFSLSFGQS 230 (337)
Q Consensus 198 ~i~vwd~~~~~~~-----------------------------------------------~~~~~~~~~~~i~~l~fs~d 230 (337)
|++||+.+++.. ..+. .+...|.+++|+|+
T Consensus 269 -i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~v~~~~~s~~ 345 (408)
T 4a11_B 269 -MRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLK--GHYKTVDCCVFQSN 345 (408)
T ss_dssp -EEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEEC--CCSSCEEEEEEETT
T ss_pred -EEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeeec--cCCCeEEEEEEcCC
Confidence 689999876532 2221 23567999999999
Q ss_pred CCcccEEEEEeCCCcEEEEecCCCccc
Q 019672 231 MQFQDILVATSSSGSLHVFSPGFAINQ 257 (337)
Q Consensus 231 g~~~~~las~s~dg~v~iw~l~~~~~~ 257 (337)
++ +|++++.||.|+|||+++.+..
T Consensus 346 ~~---~l~s~~~dg~i~iw~~~~~~~~ 369 (408)
T 4a11_B 346 FQ---ELYSGSRDCNILAWVPSLYEPV 369 (408)
T ss_dssp TT---EEEEEETTSCEEEEEECC----
T ss_pred CC---EEEEECCCCeEEEEeCCCCCcc
Confidence 99 9999999999999999876543
No 43
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.98 E-value=4.5e-31 Score=251.44 Aligned_cols=294 Identities=11% Similarity=0.040 Sum_probs=195.0
Q ss_pred CCCeEEEEEcCCC---------CEEEEEc-------------------CCc-eEEEeCCCCcEE----E--EEeeCCEEE
Q 019672 7 SYPVFFVSFNQDN---------SGFALST-------------------KDG-FKIFDSSTGRLC----Y--ERAVGAFSI 51 (337)
Q Consensus 7 ~~~v~~~~fs~dg---------~~la~g~-------------------~~g-~~vw~~~~~~~~----~--~~~~~~~~~ 51 (337)
.++|++++|+|++ ++||+|+ .++ ++|||+++++.. . ..+.+.+..
T Consensus 133 ~~~V~sv~w~p~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~ 212 (524)
T 2j04_B 133 GGLVTDIAWLNIEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWD 212 (524)
T ss_dssp CC--CCCSCEEECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEECCCSEEE
T ss_pred CCceeEEEecccCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEecCCcEEE
Confidence 4677888888776 5666654 444 699999877642 2 222345666
Q ss_pred EEEccC------CCEEEEEeCCCCCCCCCceEEEEECCCCCE-----------EEEEE-cCCceeEEEEcCCeEEE-EE-
Q 019672 52 VEMLYS------SSLLAIVGAGEQPSLSPRRLCLFNTTTGTA-----------LRELN-FLTSILAVRLNKKRLVI-VL- 111 (337)
Q Consensus 52 ~~~~~~------~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~-----------~~~~~-~~~~v~~i~~~~~~~~v-~~- 111 (337)
+++.+. ...++.++ .|++|+|||+.+++. ...+. +...|.+++|+++..++ +.
T Consensus 213 v~wsp~~~~~~~~~~LAs~s-------~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~ 285 (524)
T 2j04_B 213 LKWHEGCHAPHLVGCLSFVS-------QEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFK 285 (524)
T ss_dssp EEECSSCCCSSSSCEEEEEE-------TTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEET
T ss_pred EEECCCCCCCCCCceEEEEe-------cCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeC
Confidence 676664 24555444 499999999987642 12343 34589999997655444 44
Q ss_pred CCeEEEEECCCCe-eeeeecCCCCCceEEEE--eeCCCc-cEEEEcCCCCccEEEEEEccCCcccc-----c--CceEEE
Q 019672 112 REKTYIYDANTLA-ILDTIDTVPNLKGLCAF--SPSLNA-CFLAVPASTTKGSVLVYNVMELHSHC-----E--APLAAI 180 (337)
Q Consensus 112 d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~--~~~~~~-~~la~~~~~~dg~v~i~d~~~~~~~~-----~--~~i~~~ 180 (337)
|++|++||+++++ +...+..+.. .+.++ .+++++ .+||+++ .|++|+|||+++++... . ..|.++
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~--~V~sv~~~~s~~g~~~laS~S--~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v 361 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDS--YILSVSTAYSDFEDTVVSTVA--VDGYFYIFNPKDIATTKTTVSRFRGSNLVPV 361 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSS--CEEEEEEECCTTSCCEEEEEE--TTSEEEEECGGGHHHHCEEEEECSCCSCCCE
T ss_pred CCEEEEEECCCCCCceEEeecccc--cEEEEEEEcCCCCCeEEEEec--cCCeEEEEECCCCCcccccccccccCcccce
Confidence 8999999998763 3344555544 45555 556666 7889888 59999999998866432 2 358899
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCC
Q 019672 181 VLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRG 260 (337)
Q Consensus 181 ~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~ 260 (337)
+|+|+++.||+++.|++ |++||+++++.+..+.. |...|++|+|||+|+ +|++|+.||+|+|||+....-. ..
T Consensus 362 ~fsp~~~~l~s~~~d~t-v~lwd~~~~~~~~~l~g--H~~~V~sva~Sp~g~---~l~Sgs~Dgtv~lwd~~~~~~~-~~ 434 (524)
T 2j04_B 362 VYCPQIYSYIYSDGASS-LRAVPSRAAFAVHPLVS--RETTITAIGVSRLHP---MVLAGSADGSLIITNAARRLLH-GI 434 (524)
T ss_dssp EEETTTTEEEEECSSSE-EEEEETTCTTCCEEEEE--CSSCEEEEECCSSCC---BCEEEETTTEEECCBSCSSTTT-CC
T ss_pred EeCCCcCeEEEeCCCCc-EEEEECcccccceeeec--CCCceEEEEeCCCCC---eEEEEECCCEEEEEechHhhcc-cc
Confidence 99999999999999997 69999999988777753 466899999999999 9999999999999998643211 10
Q ss_pred Cccc-------cccccccccc-cee------ec--c--------cccceeeeeccCCCccc---CEEEEEEeCCcEEEEE
Q 019672 261 GRTS-------SILGSILPES-VNE------VL--D--------PADHHVLRNAFPAGVKR---ASVSVITYNGYFVEYI 313 (337)
Q Consensus 261 ~~~~-------~~~~~~~~~~-~~~------~w--~--------~~~~~~~~~~~~~~~~~---~~l~~~~~dg~~~~~~ 313 (337)
.... .+--.+.|+. ... +| + ...+...+..+++.|++ ..+++|+.||.|++|+
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred ccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 0000 0011112211 001 11 1 01111223455566664 4889999999999999
Q ss_pred EecCC
Q 019672 314 FSINN 318 (337)
Q Consensus 314 ~~~~~ 318 (337)
++-+.
T Consensus 515 l~~~~ 519 (524)
T 2j04_B 515 LSLEH 519 (524)
T ss_dssp CSCC-
T ss_pred ccccc
Confidence 98764
No 44
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.98 E-value=4.5e-31 Score=242.07 Aligned_cols=236 Identities=13% Similarity=0.139 Sum_probs=178.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc-------EE--EEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCC
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR-------LC--YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~-------~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (337)
.+...|++++|+|+|++|++|+.++ +++||+.+.. .. +..+.+.+..+.+.++.+..++.++ .|
T Consensus 106 ~h~~~v~~~~~s~~g~~las~~~d~~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s------~D 179 (380)
T 3iz6_a 106 LHCPWVMECAFAPNGQSVACGGLDSACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGS------GD 179 (380)
T ss_dssp CCCTTCCCCEECTTSSEEEECCSSSCCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEEC------TT
T ss_pred cCCCCEEEEEECCCCCEEEEeeCCCcEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEEC------CC
Confidence 4677899999999999999999887 5999986532 11 1122222333333333333233333 49
Q ss_pred ceEEEEECCCCCEEEEEE------cCCceeEEEEcC---CeEEEEE-CCeEEEEECCC-CeeeeeecCCCCCceEEEEee
Q 019672 75 RRLCLFNTTTGTALRELN------FLTSILAVRLNK---KRLVIVL-REKTYIYDANT-LAILDTIDTVPNLKGLCAFSP 143 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~------~~~~v~~i~~~~---~~~~v~~-d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (337)
++|++||+++++.+..+. +...|.++.+++ +.++.+. |++|++||++. .+.+..+..+.. .+.++++
T Consensus 180 ~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~--~v~~v~~ 257 (380)
T 3iz6_a 180 QTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEG--DINSVKF 257 (380)
T ss_dssp SCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSS--CCCEEEE
T ss_pred CcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCC--CeEEEEE
Confidence 999999999999887762 345799999854 3455555 89999999974 456666665544 4667777
Q ss_pred CCCccEEEEcCCCCccEEEEEEccCCccccc------------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeE
Q 019672 144 SLNACFLAVPASTTKGSVLVYNVMELHSHCE------------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY 211 (337)
Q Consensus 144 ~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~------------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~ 211 (337)
+|++.++++++ .||+|++||+++++.... ..|++++|+|+|++|++|+.||. |++||+.+++.+.
T Consensus 258 ~p~~~~l~s~s--~D~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~-i~vwd~~~~~~~~ 334 (380)
T 3iz6_a 258 FPDGQRFGTGS--DDGTCRLFDMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGD-CYVWDTLLAEMVL 334 (380)
T ss_dssp CTTSSEEEEEC--SSSCEEEEETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSC-EEEEETTTCCEEE
T ss_pred ecCCCeEEEEc--CCCeEEEEECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCC-EEEEECCCCceEE
Confidence 88888999988 599999999998765321 24899999999999999999998 6999999998877
Q ss_pred eecc--CCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 212 SFRR--GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 212 ~~~~--~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
.+.. ..|...|.+++|+|||+ +|++||.|++|+||++...
T Consensus 335 ~~~~~~~~h~~~v~~l~~s~dg~---~l~sgs~D~~i~iW~~~~~ 376 (380)
T 3iz6_a 335 NLGTLQNSHEGRISCLGLSSDGS---ALCTGSWDKNLKIWAFSGH 376 (380)
T ss_dssp EECCSCSSCCCCCCEEEECSSSS---EEEEECTTSCEEEEECCSS
T ss_pred EEecccCCCCCceEEEEECCCCC---EEEEeeCCCCEEEEecCCC
Confidence 6632 23466799999999999 9999999999999998754
No 45
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.98 E-value=4.4e-30 Score=237.35 Aligned_cols=280 Identities=14% Similarity=0.147 Sum_probs=202.0
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEE--eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 9 PVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
.+....|+|++++|++|+.++ +++||+.+++..... +...+..+++.++.+.++.++ .|++|++||++++
T Consensus 99 ~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s-------~d~~i~iwd~~~~ 171 (420)
T 3vl1_A 99 YTAVDTAKLQMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSS-------QDMQLKIWSVKDG 171 (420)
T ss_dssp EEEEEEECSSSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEE-------TTSEEEEEETTTC
T ss_pred ceEEEEEecCCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEe-------CCCeEEEEeCCCC
Confidence 344557899999999998877 699999988876654 335566677776767666554 4899999999999
Q ss_pred CEEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCC-CceE---------------------E
Q 019672 86 TALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPN-LKGL---------------------C 139 (337)
Q Consensus 86 ~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~-~~~~---------------------~ 139 (337)
+.+..+. +...|.+++|+++. ++.+. |+.|++||+++++.+..+..+.. ...+ .
T Consensus 172 ~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~ 251 (420)
T 3vl1_A 172 SNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKN 251 (420)
T ss_dssp CCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCC
T ss_pred cCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCccc
Confidence 9888887 45689999998764 55455 88999999999998888764321 1122 2
Q ss_pred EEeeCCCccEEEEcCCCCccEEEEEEccCCccc------ccCceEEEEeCCCCC-EEEEEeCCCcEEEEEEcCCCce-eE
Q 019672 140 AFSPSLNACFLAVPASTTKGSVLVYNVMELHSH------CEAPLAAIVLSSNGM-YIATASEQGTIIRVFLVSEATK-SY 211 (337)
Q Consensus 140 ~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~------~~~~i~~~~~s~dg~-~lat~s~dg~~i~vwd~~~~~~-~~ 211 (337)
+++++|++.++++++ .||.|++||+.+++.. +..+|.+++|+|+|+ +|++|+.||. |++||+++++. +.
T Consensus 252 ~~~~s~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~-i~vwd~~~~~~~~~ 328 (420)
T 3vl1_A 252 NLEFGTYGKYVIAGH--VSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM-LAQWDLRSPECPVG 328 (420)
T ss_dssp TTCSSCTTEEEEEEE--TTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSE
T ss_pred ceEEcCCCCEEEEEc--CCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe-EEEEEcCCCcCchh
Confidence 234467888999887 5999999999887643 337899999999999 9999999997 69999999865 55
Q ss_pred eeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeecc
Q 019672 212 SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAF 291 (337)
Q Consensus 212 ~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~ 291 (337)
.+. +++...|.++.| |+++ +|++++.||+|+||++.....+........ ...+.. +...+..+
T Consensus 329 ~~~-~~~~~~v~~~~~-~~~~---~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~--~~~~~~----------~~~~v~~~ 391 (420)
T 3vl1_A 329 EFL-INEGTPINNVYF-AAGA---LFVSSGFDTSIKLDIISDPESERPAIEFET--PTFLVS----------NDDAVSQF 391 (420)
T ss_dssp EEE-ESTTSCEEEEEE-ETTE---EEEEETTTEEEEEEEECCTTCCSCEECTTS--CEEECC----------SSCCCCEE
T ss_pred hhh-ccCCCCceEEEe-CCCC---EEEEecCCccEEEEeccCCCCCccceeccC--ccEEcc----------CCcceEEE
Confidence 564 334567888855 5777 999999999999999987544332100000 000000 00011112
Q ss_pred CCCcccC---EEEEEEeCCcEEEEEEe
Q 019672 292 PAGVKRA---SVSVITYNGYFVEYIFS 315 (337)
Q Consensus 292 ~~~~~~~---~l~~~~~dg~~~~~~~~ 315 (337)
.+.+++. +|++.+.+|.+.+|+++
T Consensus 392 ~~s~~~~~~g~l~a~g~~g~~~~~~~~ 418 (420)
T 3vl1_A 392 CYVSDDESNGEVLEVGKNNFCALYNLS 418 (420)
T ss_dssp EEECCSSSSCEEEEEETTTEEEEEESC
T ss_pred EEccCCCCcceEEEEcCCceEEEEecc
Confidence 2233445 89999999999999875
No 46
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.98 E-value=2.3e-29 Score=222.71 Aligned_cols=274 Identities=8% Similarity=0.068 Sum_probs=203.4
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
..+|..+|++++| |++++|++|+.++ +++||+.+++...... ...+..+.+.++.+.++..+. |+.|++
T Consensus 14 l~~h~~~v~~~~~-~~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~-------dg~i~~ 85 (313)
T 3odt_A 14 LKGHDQDVRDVVA-VDDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGK-------DTMING 85 (313)
T ss_dssp ECCCSSCEEEEEE-EETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEET-------TSCEEE
T ss_pred hhCCCCCcEEEEe-cCCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecC-------CCeEEE
Confidence 3578899999999 9999999999887 6999998887655443 355677777777777766654 899999
Q ss_pred EECCCC---CEEEEEE-cCCceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCC-CccEEEEc
Q 019672 80 FNTTTG---TALRELN-FLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL-NACFLAVP 153 (337)
Q Consensus 80 wd~~~~---~~~~~~~-~~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~ 153 (337)
|++... +.+..+. +...|.++.++++.++++. |+.|++|| .++.+..+..+..+ +.++...+ ++.+++++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~~--v~~~~~~~~~~~~l~~~ 161 (313)
T 3odt_A 86 VPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGSWDKTAKVWK--EGSLVYNLQAHNAS--VWDAKVVSFSENKFLTA 161 (313)
T ss_dssp EETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEETTSEEEEEE--TTEEEEEEECCSSC--EEEEEEEETTTTEEEEE
T ss_pred EEeeecCCCCcccchhhcccCEEEEEecCCEEEEEeCCCCEEEEc--CCcEEEecccCCCc--eeEEEEccCCCCEEEEE
Confidence 998654 4455554 4558999999888888777 88999999 55666666655443 44444433 56688887
Q ss_pred CCCCccEEEEEEccCCccc----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeec
Q 019672 154 ASTTKGSVLVYNVMELHSH----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ 229 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~ 229 (337)
+ .||.|++||....... +..+|.+++|+|++. +++++.||. |++||+++++.+..+.. +...|.+++|+|
T Consensus 162 ~--~d~~i~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~~dg~-i~i~d~~~~~~~~~~~~--~~~~i~~~~~~~ 235 (313)
T 3odt_A 162 S--ADKTIKLWQNDKVIKTFSGIHNDVVRHLAVVDDGH-FISCSNDGL-IKLVDMHTGDVLRTYEG--HESFVYCIKLLP 235 (313)
T ss_dssp E--TTSCEEEEETTEEEEEECSSCSSCEEEEEEEETTE-EEEEETTSE-EEEEETTTCCEEEEEEC--CSSCEEEEEECT
T ss_pred E--CCCCEEEEecCceEEEEeccCcccEEEEEEcCCCe-EEEccCCCe-EEEEECCchhhhhhhhc--CCceEEEEEEec
Confidence 7 5899999995443221 448899999999998 999999997 69999999999888853 356799999999
Q ss_pred CCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcE
Q 019672 230 SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYF 309 (337)
Q Consensus 230 dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~ 309 (337)
++. |++++.||+|++||+.+.+.... + ......+ ..+.+.+++. +++++.||.+
T Consensus 236 ~~~----l~~~~~dg~v~iwd~~~~~~~~~-------~----~~~~~~i----------~~~~~~~~~~-~~~~~~dg~i 289 (313)
T 3odt_A 236 NGD----IVSCGEDRTVRIWSKENGSLKQV-------I----TLPAISI----------WSVDCMSNGD-IIVGSSDNLV 289 (313)
T ss_dssp TSC----EEEEETTSEEEEECTTTCCEEEE-------E----ECSSSCE----------EEEEECTTSC-EEEEETTSCE
T ss_pred CCC----EEEEecCCEEEEEECCCCceeEE-------E----eccCceE----------EEEEEccCCC-EEEEeCCCcE
Confidence 996 88999999999999987643221 0 0000011 1122233434 8899999999
Q ss_pred EEEEEecCCCC
Q 019672 310 VEYIFSINNCC 320 (337)
Q Consensus 310 ~~~~~~~~~~~ 320 (337)
++|+++..+..
T Consensus 290 ~iw~~~~~~~~ 300 (313)
T 3odt_A 290 RIFSQEKSRWA 300 (313)
T ss_dssp EEEESCGGGCC
T ss_pred EEEeCCCCcee
Confidence 99999766543
No 47
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.98 E-value=4.9e-31 Score=243.77 Aligned_cols=274 Identities=10% Similarity=0.024 Sum_probs=203.2
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEE-EEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 9 PVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIV-EMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
.+++++|+|+|++|++|+.++ +++||+.+++.......+....+ .+.++++.++..+ .|+.|++||+++++
T Consensus 58 ~~~~~~~s~~g~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-------~dg~i~iwd~~~~~ 130 (420)
T 3vl1_A 58 AGKGNTFEKVGSHLYKARLDGHDFLFNTIIRDGSKMLKRADYTAVDTAKLQMRRFILGT-------TEGDIKVLDSNFNL 130 (420)
T ss_dssp CCTTCEEEEEETTEEEEEETTEEEEEECCSEETTTTSCSCCEEEEEEECSSSCEEEEEE-------TTSCEEEECTTSCE
T ss_pred cccceeeeecCCeEEEEEcCCcEEEEEecccceeeEEecCCceEEEEEecCCCEEEEEE-------CCCCEEEEeCCCcc
Confidence 355789999999999998776 69999987755433333343333 4555666766554 48999999999988
Q ss_pred EEEEE-EcCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEE
Q 019672 87 ALREL-NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVL 162 (337)
Q Consensus 87 ~~~~~-~~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~ 162 (337)
....+ .+...|.+++|+++. ++++. |+.|++||+.+++.+..+..+. ..+.+++++|++.++++++ .||.|+
T Consensus 131 ~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~--~~v~~~~~~~~~~~l~s~~--~d~~v~ 206 (420)
T 3vl1_A 131 QREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNPRTLIGHR--ATVTDIAIIDRGRNVLSAS--LDGTIR 206 (420)
T ss_dssp EEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCCEEEECCS--SCEEEEEEETTTTEEEEEE--TTSCEE
T ss_pred eeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCceEEcCCC--CcEEEEEEcCCCCEEEEEc--CCCcEE
Confidence 77765 456689999998764 44444 8899999999998888886544 4577778888888999888 599999
Q ss_pred EEEccCCccccc-----------------------------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEee
Q 019672 163 VYNVMELHSHCE-----------------------------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSF 213 (337)
Q Consensus 163 i~d~~~~~~~~~-----------------------------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~ 213 (337)
+||+.+++.... .++.+++|+|+|++|++|+.||. |++||+++++.+..+
T Consensus 207 iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~ 285 (420)
T 3vl1_A 207 LWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGV-ITVHNVFSKEQTIQL 285 (420)
T ss_dssp EEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSC-EEEEETTTCCEEEEE
T ss_pred EeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCe-EEEEECCCCceeEEc
Confidence 999987764321 34455667899999999999998 699999999988877
Q ss_pred ccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCC
Q 019672 214 RRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPA 293 (337)
Q Consensus 214 ~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 293 (337)
..+ +...|.+++|+|+++ .+|++|+.||+|++||+++...+.. . +.......+..++.
T Consensus 286 ~~~-~~~~v~~~~~~~~~~--~~l~~g~~dg~i~vwd~~~~~~~~~-----~-~~~~~~~~v~~~~~------------- 343 (420)
T 3vl1_A 286 PSK-FTCSCNSLTVDGNNA--NYIYAGYENGMLAQWDLRSPECPVG-----E-FLINEGTPINNVYF------------- 343 (420)
T ss_dssp CCT-TSSCEEEEEECSSCT--TEEEEEETTSEEEEEETTCTTSCSE-----E-EEESTTSCEEEEEE-------------
T ss_pred ccc-cCCCceeEEEeCCCC--CEEEEEeCCCeEEEEEcCCCcCchh-----h-hhccCCCCceEEEe-------------
Confidence 543 456799999999986 3899999999999999987643211 0 00000111112211
Q ss_pred CcccCEEEEEEeCCcEEEEEEecC
Q 019672 294 GVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 294 ~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
+++..|++++.||.+++|++...
T Consensus 344 -~~~~~l~s~~~d~~v~iw~~~~~ 366 (420)
T 3vl1_A 344 -AAGALFVSSGFDTSIKLDIISDP 366 (420)
T ss_dssp -ETTEEEEEETTTEEEEEEEECCT
T ss_pred -CCCCEEEEecCCccEEEEeccCC
Confidence 23368999999999999999763
No 48
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.98 E-value=2.1e-30 Score=241.31 Aligned_cols=237 Identities=12% Similarity=0.154 Sum_probs=172.3
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc-----------EEEEEeeCC--------------EEEEEEccCC-
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR-----------LCYERAVGA--------------FSIVEMLYSS- 58 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~-----------~~~~~~~~~--------------~~~~~~~~~~- 58 (337)
+.+.|++++|+|+|++||+|+.++ ++|||+.+++ .......+. +..+.+.++.
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~~~ 106 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQKN 106 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCCCS
T ss_pred ccCcEEEEEECCCCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCCCC
Confidence 457899999999999999999887 6999998776 344444443 5556666665
Q ss_pred -CEEEEEeCCCCCCCCCceEEEEECCCCCEE---------------------------------------EEE--EcCCc
Q 019672 59 -SLLAIVGAGEQPSLSPRRLCLFNTTTGTAL---------------------------------------REL--NFLTS 96 (337)
Q Consensus 59 -~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~---------------------------------------~~~--~~~~~ 96 (337)
+.++..+ .|++|++||+.+++.. ..+ .+...
T Consensus 107 ~~~l~s~s-------~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 179 (447)
T 3dw8_B 107 AAQFLLST-------NDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYH 179 (447)
T ss_dssp SSEEEEEE-------CSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSC
T ss_pred cceEEEeC-------CCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcc
Confidence 4455444 4999999998764432 122 24558
Q ss_pred eeEEEEcCCe--EEEEECCeEEEEECCC-Ceeeeee-----cCCCCCceEEEEeeCCCc-cEEEEcCCCCccEEEEEEcc
Q 019672 97 ILAVRLNKKR--LVIVLREKTYIYDANT-LAILDTI-----DTVPNLKGLCAFSPSLNA-CFLAVPASTTKGSVLVYNVM 167 (337)
Q Consensus 97 v~~i~~~~~~--~~v~~d~~i~i~d~~~-~~~~~~~-----~~~~~~~~~~~~~~~~~~-~~la~~~~~~dg~v~i~d~~ 167 (337)
|.+++|+++. ++.+.|+.|++||++. .+.+..+ ....+...+.+++++|++ .++++++ .||.|++||++
T Consensus 180 v~~~~~~~~~~~l~s~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~--~dg~i~iwd~~ 257 (447)
T 3dw8_B 180 INSISINSDYETYLSADDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSS--SKGTIRLCDMR 257 (447)
T ss_dssp CCEEEECTTSSEEEEECSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEE--TTSCEEEEETT
T ss_pred eEEEEEcCCCCEEEEeCCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEe--CCCeEEEEECc
Confidence 9999998764 4444488999999984 3444422 111233457788888887 7888888 59999999998
Q ss_pred CCcc----cc-----cC------------ceEEEEeCCCCCEEEEEeCCCcEEEEEEcCC-CceeEeeccCCcc------
Q 019672 168 ELHS----HC-----EA------------PLAAIVLSSNGMYIATASEQGTIIRVFLVSE-ATKSYSFRRGTYP------ 219 (337)
Q Consensus 168 ~~~~----~~-----~~------------~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~-~~~~~~~~~~~~~------ 219 (337)
+++. .. .. +|.+++|+|+|++|++++. |. |+|||+++ ++.+..+..+...
T Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~-v~iwd~~~~~~~~~~~~~~~~~~~~l~~ 335 (447)
T 3dw8_B 258 ASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LS-VKVWDLNMENRPVETYQVHEYLRSKLCS 335 (447)
T ss_dssp TCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SE-EEEEETTCCSSCSCCEESCGGGTTTHHH
T ss_pred CCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-Ce-EEEEeCCCCccccceeeccccccccccc
Confidence 8764 21 12 8999999999999999999 87 69999997 7777776532110
Q ss_pred ----e---eEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 220 ----S---TIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 220 ----~---~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
. .+..++|+|+++ +|++|+.||+|+|||+.+...
T Consensus 336 ~~~~~~i~~~~~~~~s~~~~---~l~s~s~dg~v~iwd~~~~~~ 376 (447)
T 3dw8_B 336 LYENDCIFDKFECCWNGSDS---VVMTGSYNNFFRMFDRNTKRD 376 (447)
T ss_dssp HHHTSGGGCCCCEEECTTSS---EEEEECSTTEEEEEETTTCCE
T ss_pred cccccccccceEEEECCCCC---EEEEeccCCEEEEEEcCCCcc
Confidence 0 134589999999 999999999999999987643
No 49
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.98 E-value=1.6e-29 Score=228.43 Aligned_cols=233 Identities=15% Similarity=0.174 Sum_probs=177.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|..+|++++|+|++.++++|+.|+ +++||+.+++.+..... ..+..+++.++.+.++.++ .|++|++|
T Consensus 73 ~~h~~~V~~~~~~~~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~-------~d~~i~~w 145 (343)
T 2xzm_R 73 TGHNHFVSDLALSQENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAG-------AEREIKLW 145 (343)
T ss_dssp CCCSSCEEEEEECSSTTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEE-------TTSCEEEE
T ss_pred ccCCCceEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEc-------CCCEEEEE
Confidence 46788999999999999999998877 69999999987766544 4566667777777776555 49999999
Q ss_pred ECCCCCEEEEE----EcCCceeEEEEcCCe------------EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEee
Q 019672 81 NTTTGTALREL----NFLTSILAVRLNKKR------------LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSP 143 (337)
Q Consensus 81 d~~~~~~~~~~----~~~~~v~~i~~~~~~------------~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (337)
|+.. +..... .+...|.++.++++. ++.+. |+.|++||. ..+....+..+. ..+.++++
T Consensus 146 d~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~~~~h~--~~v~~~~~ 221 (343)
T 2xzm_R 146 NILG-ECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYTFKAHE--SNVNHLSI 221 (343)
T ss_dssp ESSS-CEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEEEECCS--SCEEEEEE
T ss_pred eccC-CceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEEEcCcc--ccceEEEE
Confidence 9974 333332 244579999998753 44444 899999995 455666665543 45778888
Q ss_pred CCCccEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeE--eeccC
Q 019672 144 SLNACFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY--SFRRG 216 (337)
Q Consensus 144 ~~~~~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~--~~~~~ 216 (337)
+|++.+|++++ .||.|++||+...... +..+|++++|+|++.+|++++ |+. |++||+.+++... .+...
T Consensus 222 s~~g~~l~sgs--~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~-d~~-v~iw~~~~~~~~~~~~~~~~ 297 (343)
T 2xzm_R 222 SPNGKYIATGG--KDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT-DQG-VKIFNLMTQSKAPVCTIEAE 297 (343)
T ss_dssp CTTSSEEEEEE--TTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE-SSC-EEEEESSSCCSCSEEECCCC
T ss_pred CCCCCEEEEEc--CCCeEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC-CCC-EEEEEeCCCCCCceEEeecC
Confidence 89999999988 5999999999543321 236799999999999887665 555 6999998876543 33210
Q ss_pred ---------CcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 217 ---------TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 217 ---------~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
.+...|.+++|+|+|+ +|++|+.||+|++|+++++
T Consensus 298 ~~~~~~~~~~~~~~v~~~~~sp~g~---~l~sg~~Dg~v~~w~~~~g 341 (343)
T 2xzm_R 298 PITKAEGQKGKNPQCTSLAWNALGK---KLFAGFTDGVIRTFSFETS 341 (343)
T ss_dssp SGGGBTTBCCSCCCEEEEEECSSSC---CEEEEETTSEEEEEEEEEE
T ss_pred cchhhhhhcCCCCceEEEEECCCCC---eEEEecCCceEEEEEEEcc
Confidence 2345699999999999 9999999999999998654
No 50
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.98 E-value=8.6e-30 Score=230.53 Aligned_cols=240 Identities=13% Similarity=0.114 Sum_probs=178.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc--EEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR--LCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~ 78 (337)
.+|..+|++++|+|+|++|++|+.++ +++|+..++. .+..... ..+..+++.++++.++..+ .|++|+
T Consensus 58 ~~h~~~v~~~~~sp~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s-------~D~~v~ 130 (345)
T 3fm0_A 58 EGHQRTVRKVAWSPCGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCS-------RDKSVW 130 (345)
T ss_dssp SSCSSCEEEEEECTTSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSCEE
T ss_pred cccCCcEEEEEECCCCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEE-------CCCeEE
Confidence 46888999999999999999999877 6999987764 3344433 4566677777777776655 499999
Q ss_pred EEECCCCCE---EEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCee--eeeecCCCCCceEEEEeeCCCccE
Q 019672 79 LFNTTTGTA---LRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAI--LDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 79 iwd~~~~~~---~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
+||+.++.. +..+. +...|.++.|+++. ++.+. |+.|++||++.++. ...+..+ ...+.+++++|++.+
T Consensus 131 iwd~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h--~~~v~~l~~sp~g~~ 208 (345)
T 3fm0_A 131 VWEVDEEDEYECVSVLNSHTQDVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGH--ESTVWSLAFDPSGQR 208 (345)
T ss_dssp EEEECTTSCEEEEEEECCCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCC--SSCEEEEEECTTSSE
T ss_pred EEECCCCCCeEEEEEecCcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCC--CCceEEEEECCCCCE
Confidence 999987653 33333 44589999998764 44444 88999999987753 3455444 446778888899999
Q ss_pred EEEcCCCCccEEEEEEccCCcc---------------------cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc
Q 019672 150 LAVPASTTKGSVLVYNVMELHS---------------------HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT 208 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~---------------------~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~ 208 (337)
|++++ .||+|++||...... .|...|.+++|+|++..||+++.|+. |++|+...+.
T Consensus 209 l~s~s--~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~-i~vw~~~~~~ 285 (345)
T 3fm0_A 209 LASCS--DDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLTGALATACGDDA-IRVFQEDPNS 285 (345)
T ss_dssp EEEEE--TTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTTCCEEEEETTSC-EEEEEECTTS
T ss_pred EEEEe--CCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCCCEEEEEeCCCe-EEEEEeCCCC
Confidence 99988 599999999743211 14478999999999999999999998 6999987653
Q ss_pred e----eEee---ccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCccc
Q 019672 209 K----SYSF---RRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQ 257 (337)
Q Consensus 209 ~----~~~~---~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~ 257 (337)
. ...+ ....|...|++|+|+|++. .+||+||.||+|+||++...+..
T Consensus 286 ~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~--~~laS~s~Dg~v~~W~~~~~~~~ 339 (345)
T 3fm0_A 286 DPQQPTFSLTAHLHQAHSQDVNCVAWNPKEP--GLLASCSDDGEVAFWKYQRPEGL 339 (345)
T ss_dssp CTTSCCEEEEEEETTSSSSCEEEEEECSSST--TEEEEEETTSCEEEEEECC----
T ss_pred CcceeeEEEEeeecccccCcEeEeEEeCCCc--eEEEEcCCCCcEEEEEecCCCCc
Confidence 1 1111 1123456799999999974 28999999999999999876543
No 51
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.98 E-value=2.8e-29 Score=231.53 Aligned_cols=273 Identities=11% Similarity=0.095 Sum_probs=202.3
Q ss_pred eEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEee---CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 10 VFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAV---GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 10 v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
+.+++|++ +.+++++.++.+++||+.+++....... ..+..+.+.++++.++..+. |+.|++||+.+++
T Consensus 96 ~~~~~~s~-~~l~~~~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~~~~l~~~~~-------dg~i~iwd~~~~~ 167 (401)
T 4aez_A 96 LNLLDWSN-LNVVAVALERNVYVWNADSGSVSALAETDESTYVASVKWSHDGSFLSVGLG-------NGLVDIYDVESQT 167 (401)
T ss_dssp CBCEEECT-TSEEEEEETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTTSSEEEEEET-------TSCEEEEETTTCC
T ss_pred EEEEeecC-CCEEEEECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCCCCEEEEECC-------CCeEEEEECcCCe
Confidence 55577776 3455556566689999999987655433 45667777777777766554 8999999999999
Q ss_pred EEEEEEc-CCceeEEEEcCCeEEEEE-CCeEEEEECCC-CeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEE
Q 019672 87 ALRELNF-LTSILAVRLNKKRLVIVL-REKTYIYDANT-LAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLV 163 (337)
Q Consensus 87 ~~~~~~~-~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i 163 (337)
.+..+.. ...|.++.++++.++++. |+.|++||++. ...+..+..+ ...+.++.++|++.++++++ .||.|++
T Consensus 168 ~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~l~s~~--~d~~v~i 243 (401)
T 4aez_A 168 KLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQIGTLQGH--SSEVCGLAWRSDGLQLASGG--NDNVVQI 243 (401)
T ss_dssp EEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC--SSCEEEEEECTTSSEEEEEE--TTSCEEE
T ss_pred EEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCcceeeEEcCC--CCCeeEEEEcCCCCEEEEEe--CCCeEEE
Confidence 9888854 458999999998888877 89999999984 4556666544 34677888888999999988 5899999
Q ss_pred EEccCCccc-----ccCceEEEEeCCCCC-EEEEEe--CCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCccc
Q 019672 164 YNVMELHSH-----CEAPLAAIVLSSNGM-YIATAS--EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQD 235 (337)
Q Consensus 164 ~d~~~~~~~-----~~~~i~~~~~s~dg~-~lat~s--~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~ 235 (337)
||+.+.+.. +..+|.+++|+|++. ++++++ .||. |++||+.+++.+..+.. ...|.+++|+|+++
T Consensus 244 wd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~-i~i~d~~~~~~~~~~~~---~~~v~~~~~s~~~~--- 316 (401)
T 4aez_A 244 WDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQ-IHFWNAATGARVNTVDA---GSQVTSLIWSPHSK--- 316 (401)
T ss_dssp EETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCE-EEEEETTTCCEEEEEEC---SSCEEEEEECSSSS---
T ss_pred ccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCE-EEEEECCCCCEEEEEeC---CCcEEEEEECCCCC---
Confidence 999987654 348899999999764 666665 6887 69999999999888852 35699999999999
Q ss_pred EEEEE--eCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEE
Q 019672 236 ILVAT--SSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYI 313 (337)
Q Consensus 236 ~las~--s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~ 313 (337)
+|+++ +.||.|+||++........ ..++. +...+..+.+.+++..|++++.||.+++|+
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~---------~~~~~----------h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~ 377 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQ---------VDIPA----------HDTRVLYSALSPDGRILSTAASDENLKFWR 377 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEE---------EEEEC----------CSSCCCEEEECTTSSEEEEECTTSEEEEEE
T ss_pred eEEEEeecCCCcEEEEecCCccceeE---------EEecC----------CCCCEEEEEECCCCCEEEEEeCCCcEEEEE
Confidence 88884 4899999999876432110 00000 001112223355668999999999999999
Q ss_pred EecCCCC
Q 019672 314 FSINNCC 320 (337)
Q Consensus 314 ~~~~~~~ 320 (337)
+...+..
T Consensus 378 ~~~~~~~ 384 (401)
T 4aez_A 378 VYDGDHV 384 (401)
T ss_dssp CCC----
T ss_pred CCCCccc
Confidence 9766544
No 52
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.97 E-value=1.4e-29 Score=236.12 Aligned_cols=276 Identities=14% Similarity=0.172 Sum_probs=202.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~ 83 (337)
.+..+|++++| ++++|++|+.++ +++||+.+++.......+...+.++.++++.++..+ .|++|++||++
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~-------~dg~i~vwd~~ 201 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGS-------SDSTVRVWDVN 201 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEESSSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEE-------TTSCEEEEESS
T ss_pred CCCCcEEEEEE--CCCEEEEEeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEc-------CCCeEEEEECC
Confidence 45567999887 789999998887 699999999888777666556667777777766655 49999999999
Q ss_pred CCCEEEEEEcC-CceeEEEEcCCeEEEEE-CCeEEEEECCCCeee---eeecCCCCCceEEEEeeCCCccEEEEcCCCCc
Q 019672 84 TGTALRELNFL-TSILAVRLNKKRLVIVL-REKTYIYDANTLAIL---DTIDTVPNLKGLCAFSPSLNACFLAVPASTTK 158 (337)
Q Consensus 84 ~~~~~~~~~~~-~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~d 158 (337)
+++.+..+..+ ..|.++.++++.+++++ |+.|++||+.+++.. ..+..+ ...+.++++ ++.++++++ .|
T Consensus 202 ~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~--~~~v~~~~~--~~~~l~s~~--~d 275 (435)
T 1p22_A 202 TGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGH--RAAVNVVDF--DDKYIVSAS--GD 275 (435)
T ss_dssp SCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCC--SSCEEEEEE--ETTEEEEEE--TT
T ss_pred CCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEEEeCCCCCCceeeeEecCC--CCcEEEEEe--CCCEEEEEe--CC
Confidence 99998888654 58999999998888777 899999999887654 344433 345667776 445888887 59
Q ss_pred cEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCc
Q 019672 159 GSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQF 233 (337)
Q Consensus 159 g~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~ 233 (337)
|.|++||+.+++.. |..+|.++++ ++++|++|+.||+ |++||+++++.+.++.. +...|.+++| ++.
T Consensus 276 g~i~vwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~g~~dg~-i~iwd~~~~~~~~~~~~--h~~~v~~~~~--~~~- 347 (435)
T 1p22_A 276 RTIKVWNTSTCEFVRTLNGHKRGIACLQY--RDRLVVSGSSDNT-IRLWDIECGACLRVLEG--HEELVRCIRF--DNK- 347 (435)
T ss_dssp SEEEEEETTTCCEEEEEECCSSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECC--CSSCEEEEEC--CSS-
T ss_pred CeEEEEECCcCcEEEEEcCCCCcEEEEEe--CCCEEEEEeCCCe-EEEEECCCCCEEEEEeC--CcCcEEEEEe--cCC-
Confidence 99999999987754 3488999999 5689999999998 69999999999988853 4567999999 677
Q ss_pred ccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEE
Q 019672 234 QDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYI 313 (337)
Q Consensus 234 ~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~ 313 (337)
+|++|+.||+|+|||+.....+...... ..+. .+.. +...+..+.+ ++.+|++++.||.+++|+
T Consensus 348 --~l~sg~~dg~i~vwd~~~~~~~~~~~~~-~~~~-~~~~----------h~~~v~~l~~--~~~~l~s~s~Dg~i~iwd 411 (435)
T 1p22_A 348 --RIVSGAYDGKIKVWDLVAALDPRAPAGT-LCLR-TLVE----------HSGRVFRLQF--DEFQIVSSSHDDTILIWD 411 (435)
T ss_dssp --EEEEEETTSCEEEEEHHHHTSTTSCTTT-TEEE-EECC----------CSSCCCCEEE--CSSCEEECCSSSEEEEEC
T ss_pred --EEEEEeCCCcEEEEECCCCCCccccccc-hhee-eccC----------CCCCeEEEEe--CCCEEEEEeCCCEEEEEE
Confidence 9999999999999999765533211000 0000 0011 1111111222 457899999999999999
Q ss_pred EecCCC
Q 019672 314 FSINNC 319 (337)
Q Consensus 314 ~~~~~~ 319 (337)
+.....
T Consensus 412 ~~~~~~ 417 (435)
T 1p22_A 412 FLNDPA 417 (435)
T ss_dssp ------
T ss_pred CCCCCC
Confidence 976543
No 53
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=4.8e-29 Score=231.41 Aligned_cols=269 Identities=13% Similarity=0.110 Sum_probs=205.0
Q ss_pred CeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEe--eC--CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC
Q 019672 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA--VG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~ 84 (337)
-++.++|+++ ..||+|.++.++|||..+++...... .+ .+..+++.++++.++..+ .|++|+|||+++
T Consensus 107 y~~~l~wS~~-n~lAvgld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspdg~~lasgs-------~Dg~v~iWd~~~ 178 (420)
T 4gga_A 107 YLNLVDWSSG-NVLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-------SSAEVQLWDVQQ 178 (420)
T ss_dssp TCBCEEECTT-SEEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------TTSCEEEEETTT
T ss_pred cceeEEECCC-CEEEEEeCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCCCCEEEEEE-------CCCeEEEEEcCC
Confidence 3667999986 48999998889999999998765443 33 366777777777776654 499999999999
Q ss_pred CCEEEEEEcC-CceeEEEEcCCeEEEEE-CCeEEEEECCCC-eeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEE
Q 019672 85 GTALRELNFL-TSILAVRLNKKRLVIVL-REKTYIYDANTL-AILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSV 161 (337)
Q Consensus 85 ~~~~~~~~~~-~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v 161 (337)
++++..+..+ ..+.++.+++..++.+. |+.+++||.... ..+..+..+ ...++.+...+++.++++++ .|+.|
T Consensus 179 ~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~~d~~~~~~~~~~~~~h--~~~~~~~~~~~~g~~l~s~~--~D~~v 254 (420)
T 4gga_A 179 QKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGH--SQEVCGLRWAPDGRHLASGG--NDNLV 254 (420)
T ss_dssp TEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECC--SSCEEEEEECTTSSEEEEEE--TTSCE
T ss_pred CcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeEeeecccceeeEEeccc--ccceeeeeecCCCCeeeeee--ccccc
Confidence 9999888655 47899999998888777 889999999765 334555544 34577778888889999988 59999
Q ss_pred EEEEccCCccc---------ccCceEEEEeCCCCC-EEEEE--eCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeec
Q 019672 162 LVYNVMELHSH---------CEAPLAAIVLSSNGM-YIATA--SEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ 229 (337)
Q Consensus 162 ~i~d~~~~~~~---------~~~~i~~~~~s~dg~-~lat~--s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~ 229 (337)
++||..+++.. +..+|.+++|+|++. +++++ +.|++ |++||+.+++.+..+.. ...+.++.|+|
T Consensus 255 ~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~-I~iwd~~t~~~~~~~~~---~~~v~~~~~~~ 330 (420)
T 4gga_A 255 NVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVDA---HSQVCSILWSP 330 (420)
T ss_dssp EEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCE-EEEEETTTTEEEEEEEC---SSCEEEEEEET
T ss_pred eEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCE-EEEEeCCccccceeecc---ccceeeeeecC
Confidence 99999876532 338899999999654 55554 57887 79999999999887753 34588999999
Q ss_pred CCCcccEEEEEe--CCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCC
Q 019672 230 SMQFQDILVATS--SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNG 307 (337)
Q Consensus 230 dg~~~~~las~s--~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg 307 (337)
+++ .|++++ .|++|+|||+.+...... +. .|...+..+.+.+++.+|++++.||
T Consensus 331 ~~~---~lv~~sg~~d~~I~iwd~~~~~~v~~-----------l~----------gH~~~V~~l~~spdg~~l~S~s~D~ 386 (420)
T 4gga_A 331 HYK---ELISGHGFAQNQLVIWKYPTMAKVAE-----------LK----------GHTSRVLSLTMSPDGATVASAAADE 386 (420)
T ss_dssp TTT---EEEEEECTTTCCEEEEETTTCCEEEE-----------EC----------CCSSCEEEEEECTTSSCEEEEETTT
T ss_pred CCC---eEEEEEecCCCEEEEEECCCCcEEEE-----------Ec----------CCCCCEEEEEEcCCCCEEEEEecCC
Confidence 999 777765 789999999976543221 11 1111223344467779999999999
Q ss_pred cEEEEEEecC
Q 019672 308 YFVEYIFSIN 317 (337)
Q Consensus 308 ~~~~~~~~~~ 317 (337)
+|++|++...
T Consensus 387 tvriWdv~~~ 396 (420)
T 4gga_A 387 TLRLWRCFEL 396 (420)
T ss_dssp EEEEECCSCS
T ss_pred eEEEEECCCC
Confidence 9999998644
No 54
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.97 E-value=3.5e-29 Score=232.33 Aligned_cols=238 Identities=11% Similarity=0.101 Sum_probs=183.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
..+...|++++|+|||++||+|+.++ ++|||+++++.+.....+...+.++.+++..++..+ .|+.+++||.
T Consensus 144 ~~~~~~V~sv~fspdg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs-------~d~~i~~~d~ 216 (420)
T 4gga_A 144 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGS-------RSGHIHHHDV 216 (420)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEE-------TTSEEEEEET
T ss_pred cCCCCcEEEEEECCCCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEe-------CCCceeEeee
Confidence 45677899999999999999999887 699999999998887777666777777887766554 4899999998
Q ss_pred CCCC-EEEEEEc-CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCee----eeeecCCCCCceEEEEeeCCCc-cEEEE
Q 019672 83 TTGT-ALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAI----LDTIDTVPNLKGLCAFSPSLNA-CFLAV 152 (337)
Q Consensus 83 ~~~~-~~~~~~~-~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~----~~~~~~~~~~~~~~~~~~~~~~-~~la~ 152 (337)
.... .+..+.. ...+..+.++++. ++.+. |+.+++||+.+++. +.....+. ..+.++.++|.+ .++++
T Consensus 217 ~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~--~~V~~~~~~p~~~~~la~ 294 (420)
T 4gga_A 217 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQ--GAVKAVAWCPWQSNVLAT 294 (420)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCS--SCEEEEEECTTCTTEEEE
T ss_pred cccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccC--CceeeeeeCCCcccEEEE
Confidence 8654 4455544 4578888887754 33334 89999999987643 23333333 345555555533 35554
Q ss_pred cCCCCccEEEEEEccCCccccc----CceEEEEeCCCCCEEEEEe--CCCcEEEEEEcCCCceeEeeccCCcceeEEEEE
Q 019672 153 PASTTKGSVLVYNVMELHSHCE----APLAAIVLSSNGMYIATAS--EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 226 (337)
Q Consensus 153 ~~~~~dg~v~i~d~~~~~~~~~----~~i~~~~~s~dg~~lat~s--~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~ 226 (337)
++...|+.|++||+.++..... ..+.++.|+|+++.|++++ .||+ |+|||+.+++++.++. + |...|++|+
T Consensus 295 ~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~sg~~d~~-I~iwd~~~~~~v~~l~-g-H~~~V~~l~ 371 (420)
T 4gga_A 295 GGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELK-G-HTSRVLSLT 371 (420)
T ss_dssp EECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEEC-C-CSSCEEEEE
T ss_pred EeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEEecCCCE-EEEEECCCCcEEEEEc-C-CCCCEEEEE
Confidence 3322699999999998876543 7899999999999998876 7888 6999999999999985 3 466899999
Q ss_pred eecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 227 FGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 227 fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
|||||+ +|++|+.|++|+|||+.....
T Consensus 372 ~spdg~---~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 372 MSPDGA---TVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp ECTTSS---CEEEEETTTEEEEECCSCSSC
T ss_pred EcCCCC---EEEEEecCCeEEEEECCCCCc
Confidence 999999 999999999999999976443
No 55
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.97 E-value=1.3e-29 Score=227.56 Aligned_cols=269 Identities=10% Similarity=0.089 Sum_probs=198.1
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc----EEEE-EeeCCEEEEEEccCCC-EEEEEeCCCCCCCCCce
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR----LCYE-RAVGAFSIVEMLYSSS-LLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~----~~~~-~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~~d~~ 76 (337)
++|.+.|++++|+|++++|++|+.++ +++|++.+++ .... .+...+..+.+.++.+ .++..+ .|+.
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------~dg~ 80 (342)
T 1yfq_A 8 QAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGT-------VQGE 80 (342)
T ss_dssp SCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEE-------TTSC
T ss_pred cCCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEc-------CCCe
Confidence 47889999999999999999988777 6999998876 3222 2335566777777777 665554 4899
Q ss_pred EEEEEC-CCCCEEEEEE--cCCceeEEEEcC-CeEEEEE-CCeEEEEECCC---------CeeeeeecCCCCCceEEEEe
Q 019672 77 LCLFNT-TTGTALRELN--FLTSILAVRLNK-KRLVIVL-REKTYIYDANT---------LAILDTIDTVPNLKGLCAFS 142 (337)
Q Consensus 77 v~iwd~-~~~~~~~~~~--~~~~v~~i~~~~-~~~~v~~-d~~i~i~d~~~---------~~~~~~~~~~~~~~~~~~~~ 142 (337)
|++||+ .+++...... +...|.++.+++ +.++++. |+.|++||+++ ++.+..+. ....+.+++
T Consensus 81 i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---~~~~v~~~~ 157 (342)
T 1yfq_A 81 ILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK---VKNKIFTMD 157 (342)
T ss_dssp EEEECSSSSSSEEECBSCCCCSCEEEEEEETTTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---SCCCEEEEE
T ss_pred EEEEEeccCCceEeccccCCCCceEEEEeCCCCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---eCCceEEEE
Confidence 999999 8887643334 666899999986 4445455 88999999987 66555554 334577778
Q ss_pred eCCCccEEEEcCCCCccEEEEEEccC-Cccc-------ccCceEEEEeCC-CCCEEEEEeCCCcEEEEEEcCCC------
Q 019672 143 PSLNACFLAVPASTTKGSVLVYNVME-LHSH-------CEAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEA------ 207 (337)
Q Consensus 143 ~~~~~~~la~~~~~~dg~v~i~d~~~-~~~~-------~~~~i~~~~~s~-dg~~lat~s~dg~~i~vwd~~~~------ 207 (337)
+++++ +++++ .++.|++||+.+ +... +..+|.+++|+| ++++|++++.||. |++|++..+
T Consensus 158 ~~~~~--l~~~~--~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~-i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 158 TNSSR--LIVGM--NNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGR-VAVEFFDDQGDDYNS 232 (342)
T ss_dssp ECSSE--EEEEE--STTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSE-EEEEECCTTCCSTTC
T ss_pred ecCCc--EEEEe--CCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCc-EEEEEEcCCCccccc
Confidence 88776 66665 489999999988 4421 337899999999 9999999999997 699999877
Q ss_pred ceeEeeccCCc-------ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCccccccccccccc-ceeec
Q 019672 208 TKSYSFRRGTY-------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPES-VNEVL 279 (337)
Q Consensus 208 ~~~~~~~~~~~-------~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~-~~~~w 279 (337)
+.+..+..+.. ...|.+++|+|+++ +|++++.||+|+|||+.+.+.... +... ...+
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~---~l~~~~~dg~i~vwd~~~~~~~~~-----------~~~~h~~~v- 297 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHK---FLYTAGSDGIISCWNLQTRKKIKN-----------FAKFNEDSV- 297 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTC---CEEEEETTSCEEEEETTTTEEEEE-----------CCCCSSSEE-
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCC---EEEEecCCceEEEEcCccHhHhhh-----------hhcccCCCc-
Confidence 66666653211 23799999999999 999999999999999986543221 1100 0011
Q ss_pred ccccceeeeeccCCCcccCEEEEEEeCCc-EEEEE
Q 019672 280 DPADHHVLRNAFPAGVKRASVSVITYNGY-FVEYI 313 (337)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~-~~~~~ 313 (337)
..+. ++++.|++++.||. .+.|.
T Consensus 298 ---------~~~~--~~~~~l~s~s~Dg~~~~~~~ 321 (342)
T 1yfq_A 298 ---------VKIA--CSDNILCLATSDDTFKTNAA 321 (342)
T ss_dssp ---------EEEE--ECSSEEEEEEECTHHHHCSS
T ss_pred ---------eEec--CCCCeEEEEecCCccccccc
Confidence 1112 45689999999998 44444
No 56
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=1.4e-28 Score=237.79 Aligned_cols=279 Identities=14% Similarity=0.162 Sum_probs=198.7
Q ss_pred CCCCCCeEEEEEcCCCC-EEEEEcCCc-eEEEeCCCCcEEEEEee--C---CEEEEEEccC-CCEEEEEeCCCCCCCCCc
Q 019672 4 QSSSYPVFFVSFNQDNS-GFALSTKDG-FKIFDSSTGRLCYERAV--G---AFSIVEMLYS-SSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~-~la~g~~~g-~~vw~~~~~~~~~~~~~--~---~~~~~~~~~~-~~~~~~~~~g~~~~~~d~ 75 (337)
..+..+|++++|+|+++ .|++|+.++ +++||+.+++.+..... . .+..+.+.++ .+.++..+ .|+
T Consensus 157 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~-------~dg 229 (615)
T 1pgu_A 157 SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG-------SDR 229 (615)
T ss_dssp CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE-------TTC
T ss_pred ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEe-------CCC
Confidence 45778999999999998 788888877 69999999988776653 3 4666667666 66666554 389
Q ss_pred eEEEEECCCCCEEEEE-----EcCCceeEEEEc-CCeEEEEE-CCeEEEEECCCCeeeeeecCCCC--------------
Q 019672 76 RLCLFNTTTGTALREL-----NFLTSILAVRLN-KKRLVIVL-REKTYIYDANTLAILDTIDTVPN-------------- 134 (337)
Q Consensus 76 ~v~iwd~~~~~~~~~~-----~~~~~v~~i~~~-~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~-------------- 134 (337)
.|++||+++++.+..+ .+..+|.++.|+ ++.++++. |+.|++||+++++.+..+..+..
T Consensus 230 ~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 309 (615)
T 1pgu_A 230 KISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGN 309 (615)
T ss_dssp CEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEET
T ss_pred eEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCC
Confidence 9999999999999988 566789999996 33455555 78999999988776655543210
Q ss_pred --------------------------------------------------------------CceEEEEeeC--------
Q 019672 135 --------------------------------------------------------------LKGLCAFSPS-------- 144 (337)
Q Consensus 135 --------------------------------------------------------------~~~~~~~~~~-------- 144 (337)
...+.++++.
T Consensus 310 ~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~ 389 (615)
T 1pgu_A 310 GRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDGRIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSI 389 (615)
T ss_dssp TEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTSCEEETTTTEEECCCCSCEEEEECCSTTCCEEE
T ss_pred CeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCCeEEEEEchhhcCcccCceEEEEECCCcEEEEE
Confidence 0001111110
Q ss_pred --------------------------CC--------------------------------------ccEEEEcCCCC-cc
Q 019672 145 --------------------------LN--------------------------------------ACFLAVPASTT-KG 159 (337)
Q Consensus 145 --------------------------~~--------------------------------------~~~la~~~~~~-dg 159 (337)
|+ +.++++++ . +|
T Consensus 390 ~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~d~ 467 (615)
T 1pgu_A 390 SWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTGDIIKSVRLNSPGSAVSLSQNYVAVGL--EEGN 467 (615)
T ss_dssp ETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSEEEEEE--TTTS
T ss_pred eCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCCceeeecccCCCceEEEEcCCEEEEee--cCCC
Confidence 00 12233332 3 66
Q ss_pred EEEEEEccCCccc------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeec----
Q 019672 160 SVLVYNVMELHSH------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ---- 229 (337)
Q Consensus 160 ~v~i~d~~~~~~~------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~---- 229 (337)
.|++||+.+.... +..+|++++|+|+|++||+++.||. |++||+.+++.+..+. +.|...|++++|+|
T Consensus 468 ~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~-i~iw~~~~~~~~~~~~-~~h~~~v~~~~~sp~~~~ 545 (615)
T 1pgu_A 468 TIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGK-ILLYDLQSREVKTSRW-AFRTSKINAISWKPAEKG 545 (615)
T ss_dssp CEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSC-EEEEETTTTEEEECCS-CCCSSCEEEEEECCCC--
T ss_pred eEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCCe-EEEeeCCCCcceeEee-cCCCCceeEEEEcCcccc
Confidence 7777777654331 3488999999999999999999998 6999999999988774 32467899999999
Q ss_pred ------CCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEE
Q 019672 230 ------SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVI 303 (337)
Q Consensus 230 ------dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~ 303 (337)
+++ +|++++.||+|+|||+++...... .+..... .+..+.+.+++. |+++
T Consensus 546 ~~~~~~~~~---~l~~~~~dg~i~iw~~~~~~~~~~----------~~~~h~~----------~v~~l~~s~~~~-l~s~ 601 (615)
T 1pgu_A 546 ANEEEIEED---LVATGSLDTNIFIYSVKRPMKIIK----------ALNAHKD----------GVNNLLWETPST-LVSS 601 (615)
T ss_dssp ----CCSCC---EEEEEETTSCEEEEESSCTTCCEE----------ETTSSTT----------CEEEEEEEETTE-EEEE
T ss_pred ccccccCCC---EEEEEcCCCcEEEEECCCCceech----------hhhcCcc----------ceEEEEEcCCCC-eEEe
Confidence 999 999999999999999987532110 0110001 112223345557 9999
Q ss_pred EeCCcEEEEEEecC
Q 019672 304 TYNGYFVEYIFSIN 317 (337)
Q Consensus 304 ~~dg~~~~~~~~~~ 317 (337)
+.||.+++|+++++
T Consensus 602 ~~d~~v~iw~~~~~ 615 (615)
T 1pgu_A 602 GADACIKRWNVVLE 615 (615)
T ss_dssp ETTSCEEEEEEC--
T ss_pred cCCceEEEEeeecC
Confidence 99999999999753
No 57
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=9.8e-30 Score=230.94 Aligned_cols=239 Identities=12% Similarity=0.153 Sum_probs=180.8
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCC--CcEEEEEee--CCEEEEEEccC--CCEEEEEeCCCCCCCCCc
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSST--GRLCYERAV--GAFSIVEMLYS--SSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~--~~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~ 75 (337)
..+|..+|++++|+|++++|++|+.++ ++|||+.. ++.+..... ..+..+.+.++ .+.++.++ .|+
T Consensus 7 ~~~h~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~-------~dg 79 (379)
T 3jrp_A 7 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------YDG 79 (379)
T ss_dssp EEECCCCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE-------TTS
T ss_pred ecCCcccEEEEEEcCCCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec-------cCC
Confidence 347899999999999999999998777 69999974 444444433 44555666544 56665554 489
Q ss_pred eEEEEECCCCC--EEEEEE-cCCceeEEEEcCC----eEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCC--
Q 019672 76 RLCLFNTTTGT--ALRELN-FLTSILAVRLNKK----RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL-- 145 (337)
Q Consensus 76 ~v~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~----~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-- 145 (337)
.|++||+.+++ .+..+. +...|.++.|+++ .++++. |+.|++||++.......+....+...+.++.++|
T Consensus 80 ~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 159 (379)
T 3jrp_A 80 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 159 (379)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEECCCC
T ss_pred EEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEEcCcc
Confidence 99999999987 445554 4568999999876 355555 8899999998874333222223344677777777
Q ss_pred -----------CccEEEEcCCCCccEEEEEEccCCccc---------ccCceEEEEeCCC---CCEEEEEeCCCcEEEEE
Q 019672 146 -----------NACFLAVPASTTKGSVLVYNVMELHSH---------CEAPLAAIVLSSN---GMYIATASEQGTIIRVF 202 (337)
Q Consensus 146 -----------~~~~la~~~~~~dg~v~i~d~~~~~~~---------~~~~i~~~~~s~d---g~~lat~s~dg~~i~vw 202 (337)
++.++++++ .||.|++||+.+.... |..+|.+++|+|+ +++|++++.||. |++|
T Consensus 160 ~~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~-i~iw 236 (379)
T 3jrp_A 160 IEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIW 236 (379)
T ss_dssp ----------CTTCEEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSC-EEEE
T ss_pred ccccccccCCCCCCEEEEEe--CCCeEEEEEecCCCcceeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCE-EEEE
Confidence 578888887 5999999999865421 3488999999999 899999999998 6999
Q ss_pred EcCCCc---eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 203 LVSEAT---KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 203 d~~~~~---~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
|+.+++ ....+....+...|.+++|+|+|+ +|++++.||.|+||++...
T Consensus 237 d~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 237 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp EESSTTSCCEEEESSSSCCSSCEEEEEECSSSC---CEEEEESSSSEEEEEEEET
T ss_pred eCCCCCccceeeeeccccCCCcEEEEEEcCCCC---EEEEecCCCcEEEEeCCCC
Confidence 999875 222232223456799999999999 9999999999999999753
No 58
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=3.8e-29 Score=240.50 Aligned_cols=268 Identities=13% Similarity=0.153 Sum_probs=198.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
..+..+|++++|+||++.|++++.++ +++||.. ++.+..... ..+..+.+.++...++..+ .|++|++|
T Consensus 259 ~~~~~~v~~v~~~~d~~~l~~~~~d~~i~~w~~~-~~~~~~~~~h~~~v~~~~~~~~~~~l~t~~-------~d~~i~~w 330 (577)
T 2ymu_A 259 TGHSSSVNGVAFRPDGQTIASASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDGQTIASAS-------DDKTVKLW 330 (577)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETT-SCEEEEECCCSSCEEEEEECTTSSEEEEEE-------TTSCEEEE
T ss_pred ecCCCCEEEEEEcCCCCEEEEEeCCCEEEEEeCC-CcEEEEEecCCCCeEEEEECCCCCEEEEEe-------CCCeEEEE
Confidence 45778999999999999999998877 6999975 444444433 4455566666667766655 38999999
Q ss_pred ECCCCCEEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC
Q 019672 81 NTTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 81 d~~~~~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
|..... +..+. +..+|.++++++++ ++++. ++.+++||. +++.+..+..+. ..+.+++++|++.++++++
T Consensus 331 ~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~--~~v~~~~~s~dg~~l~~~~-- 404 (577)
T 2ymu_A 331 NRNGQH-LQTLTGHSSSVWGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHS--SSVRGVAFSPDGQTIASAS-- 404 (577)
T ss_dssp ETTSCE-EEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET-TCCEEEEEECCS--SCEEEEEECTTSSCEEEEE--
T ss_pred eCCCCe-eEEEeCCCCCEEEEEECCCCCEEEEEeCCCEEEEEcC-CCCEEEEecCCC--CCeEEEEECCCCCEEEEEe--
Confidence 986554 44443 45689999998875 33344 889999996 456677776544 3567778888899999887
Q ss_pred CccEEEEEEccCCcc----cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCC
Q 019672 157 TKGSVLVYNVMELHS----HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQ 232 (337)
Q Consensus 157 ~dg~v~i~d~~~~~~----~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~ 232 (337)
.|+.|++||...... .|..+|++++|+||+++||+++.|++ |++||. +++.+..+.. +...|.+++|+||++
T Consensus 405 ~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~d~~-v~~w~~-~~~~~~~~~~--~~~~v~~~~~spd~~ 480 (577)
T 2ymu_A 405 DDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPDDQTIASASDDKT-VKLWNR-NGQLLQTLTG--HSSSVRGVAFSPDGQ 480 (577)
T ss_dssp TTSEEEEECTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSE-EEEEET-TSCEEEEEEC--CSSCEEEEEECTTSC
T ss_pred CCCEEEEEeCCCCEEEEecCCCCCeEEEEECCCCCEEEEEcCCCE-EEEEEC-CCCEEEEEcC--CCCCEEEEEEcCCCC
Confidence 599999999653321 24488999999999999999999997 699996 5667776643 356799999999999
Q ss_pred cccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEE
Q 019672 233 FQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEY 312 (337)
Q Consensus 233 ~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~ 312 (337)
+||+++.|++|+|||.... ..+ .+. .+...+..+.+.+++++|++++.||.+++|
T Consensus 481 ---~las~~~d~~i~iw~~~~~-~~~-----------~~~----------~h~~~v~~l~~s~dg~~l~s~~~dg~v~lw 535 (577)
T 2ymu_A 481 ---TIASASDDKTVKLWNRNGQ-LLQ-----------TLT----------GHSSSVRGVAFSPDGQTIASASDDKTVKLW 535 (577)
T ss_dssp ---EEEEEETTSEEEEEETTSC-EEE-----------EEE----------CCSSCEEEEEECTTSSCEEEEETTSEEEEE
T ss_pred ---EEEEEeCCCEEEEEcCCCC-EEE-----------EEe----------CCCCCEEEEEEcCCCCEEEEEECcCEEEEE
Confidence 9999999999999996421 111 000 011112334446677899999999999999
Q ss_pred EE
Q 019672 313 IF 314 (337)
Q Consensus 313 ~~ 314 (337)
+.
T Consensus 536 d~ 537 (577)
T 2ymu_A 536 NR 537 (577)
T ss_dssp CT
T ss_pred eC
Confidence 85
No 59
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=1.4e-28 Score=218.73 Aligned_cols=233 Identities=13% Similarity=0.169 Sum_probs=185.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
..+..+|++++|+|++++|++|+.++ +++||+.+++.+..... ..+..+.+.++.+.++..+ .|++|++|
T Consensus 62 ~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~-------~d~~i~iw 134 (312)
T 4ery_A 62 SGHKLGISDVAWSSDSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGS-------FDESVRIW 134 (312)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-------TTSCEEEE
T ss_pred ccCCCceEEEEEcCCCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEe-------CCCcEEEE
Confidence 46788999999999999999998887 59999999987766554 3456666666667766554 48999999
Q ss_pred ECCCCCEEEEEEcC-CceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC
Q 019672 81 NTTTGTALRELNFL-TSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 81 d~~~~~~~~~~~~~-~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
|+++++.+..+..+ .+|.++.++++. ++++. |+.|++||+++++.+..+... +...+..++++|++.++++++
T Consensus 135 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~-- 211 (312)
T 4ery_A 135 DVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDD-DNPPVSFVKFSPNGKYILAAT-- 211 (312)
T ss_dssp ETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCS-SCCCEEEEEECTTSSEEEEEE--
T ss_pred ECCCCEEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEecc-CCCceEEEEECCCCCEEEEEc--
Confidence 99999998887654 589999998764 44444 899999999998877776432 223466777888888999887
Q ss_pred CccEEEEEEccCCccccc-----C---ceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEee
Q 019672 157 TKGSVLVYNVMELHSHCE-----A---PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 228 (337)
Q Consensus 157 ~dg~v~i~d~~~~~~~~~-----~---~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs 228 (337)
.||.|++||+.+++.... . .+......+++.+|++|+.||. |++||+++++.+.++.. |...|.+++|+
T Consensus 212 ~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~--h~~~v~~~~~~ 288 (312)
T 4ery_A 212 LDNTLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGGKWIVSGSEDNL-VYIWNLQTKEIVQKLQG--HTDVVISTACH 288 (312)
T ss_dssp TTTEEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSSCEEEECCTTSC-EEEEETTTCCEEEEECC--CSSCEEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCCcEEEEECCCCE-EEEEECCCchhhhhhhc--cCCcEEEEeec
Confidence 599999999998765422 2 2333444578999999999998 69999999999888853 35679999999
Q ss_pred cCCCcccEEEEEe--CCCcEEEEecC
Q 019672 229 QSMQFQDILVATS--SSGSLHVFSPG 252 (337)
Q Consensus 229 ~dg~~~~~las~s--~dg~v~iw~l~ 252 (337)
|+++ +|++++ .|++|+||+.+
T Consensus 289 p~~~---~l~s~~~~~d~~i~~W~~d 311 (312)
T 4ery_A 289 PTEN---IIASAALENDKTIKLWKSD 311 (312)
T ss_dssp SSSS---EEEEEECTTTCCEEEEECC
T ss_pred CcCC---ceEEEEccCCccEEEecCC
Confidence 9999 999987 69999999864
No 60
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2.3e-29 Score=231.75 Aligned_cols=274 Identities=16% Similarity=0.186 Sum_probs=200.3
Q ss_pred CCCCeEEEEEcCCCC-EEEEEcCCc-eEEEeC----CCCc------EEEEEee------------CCEEEEEEccCCCEE
Q 019672 6 SSYPVFFVSFNQDNS-GFALSTKDG-FKIFDS----STGR------LCYERAV------------GAFSIVEMLYSSSLL 61 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~-~la~g~~~g-~~vw~~----~~~~------~~~~~~~------------~~~~~~~~~~~~~~~ 61 (337)
+..+|++++|+|+|+ +|++|+.++ +++|++ .+++ ....... ..+..+++.++++.+
T Consensus 44 ~~~~v~~~~~s~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 123 (425)
T 1r5m_A 44 KLDNIVSSTWNPLDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHDGNSI 123 (425)
T ss_dssp ECSCCSEEEECSSCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTTSSEE
T ss_pred ccCceEEEEECCCCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCCCCEE
Confidence 457899999999999 999999877 699999 8887 3333221 256667777777777
Q ss_pred EEEeCCCCCCCCCceEEEEECCCCCEEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCce
Q 019672 62 AIVGAGEQPSLSPRRLCLFNTTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKG 137 (337)
Q Consensus 62 ~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~ 137 (337)
+..+. |+.|++|| .+++.+..+. +...|.++.|+++. ++++. |+.|++||+.+++.+..+..+.....
T Consensus 124 ~~~~~-------dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~ 195 (425)
T 1r5m_A 124 VTGVE-------NGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETGGS 195 (425)
T ss_dssp EEEET-------TSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC-----
T ss_pred EEEeC-------CCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccCcc
Confidence 66553 89999999 6677777776 44589999998764 44454 88999999999988888765543211
Q ss_pred -------------EEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEE
Q 019672 138 -------------LCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTII 199 (337)
Q Consensus 138 -------------~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i 199 (337)
+.++.+++++ .+++++ .+|.|++||+.+.+.. +..+|.+++|+|++++|++++.||. |
T Consensus 196 ~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~-i 271 (425)
T 1r5m_A 196 SINAENHSGDGSLGVDVEWVDDD-KFVIPG--PKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGT-L 271 (425)
T ss_dssp ----------CCCBSCCEEEETT-EEEEEC--GGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSC-E
T ss_pred ceeeccccCCcceeeEEEEcCCC-EEEEEc--CCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCE-E
Confidence 3344444554 456666 4899999999887654 3488999999999999999999998 6
Q ss_pred EEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeec
Q 019672 200 RVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVL 279 (337)
Q Consensus 200 ~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w 279 (337)
++||+.+++.+..+.. +...|.+++|+|++ +|++++.|+.|++||+.+...... +.. .
T Consensus 272 ~i~d~~~~~~~~~~~~--~~~~i~~~~~~~~~----~l~~~~~d~~i~i~d~~~~~~~~~----------~~~-~----- 329 (425)
T 1r5m_A 272 RIWHGGNGNSQNCFYG--HSQSIVSASWVGDD----KVISCSMDGSVRLWSLKQNTLLAL----------SIV-D----- 329 (425)
T ss_dssp EEECSSSBSCSEEECC--CSSCEEEEEEETTT----EEEEEETTSEEEEEETTTTEEEEE----------EEC-T-----
T ss_pred EEEECCCCccceEecC--CCccEEEEEECCCC----EEEEEeCCCcEEEEECCCCcEeEe----------ccc-C-----
Confidence 9999999988877742 35679999999998 699999999999999976543211 000 0
Q ss_pred ccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecCC
Q 019672 280 DPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSINN 318 (337)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~~ 318 (337)
...+..+.+.++++.|++++.||.+++|+++..+
T Consensus 330 -----~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~ 363 (425)
T 1r5m_A 330 -----GVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLN 363 (425)
T ss_dssp -----TCCEEEEEECTTSSEEEEEETTSCEEEEECHHHH
T ss_pred -----CccEEEEEEcCCCCEEEEEECCCeEEEEECCCCc
Confidence 0011122334566899999999999999997554
No 61
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=4.6e-30 Score=229.52 Aligned_cols=234 Identities=14% Similarity=0.128 Sum_probs=166.2
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcE--EEEEee--CCEEEEEEccC--CCEEEEEeCCCCCCCCCc
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRL--CYERAV--GAFSIVEMLYS--SSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~--~~~~~~--~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~ 75 (337)
..+|..+|++++|+|+|++||+|+.|+ ++|||+.+++. +..... ..+..+++.++ ++.++.++ .|+
T Consensus 9 ~~~H~~~V~~v~~s~~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s-------~D~ 81 (316)
T 3bg1_A 9 DTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCS-------YDR 81 (316)
T ss_dssp -----CCEEEEEECGGGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEE-------TTS
T ss_pred cccccCeEEEeeEcCCCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEE-------CCC
Confidence 457899999999999999999999887 69999987743 344433 44555565442 45665554 499
Q ss_pred eEEEEECCCCC--EEEEEE-cCCceeEEEEcCC----eEEEEE-CCeEEEEECCCCee---eeeecCCCCCceEEEEeeC
Q 019672 76 RLCLFNTTTGT--ALRELN-FLTSILAVRLNKK----RLVIVL-REKTYIYDANTLAI---LDTIDTVPNLKGLCAFSPS 144 (337)
Q Consensus 76 ~v~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~----~~~v~~-d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~ 144 (337)
+|++||+++++ .+..+. +...|.+++|+++ .++.+. |+.|++||++.... ...+..+. ..+.+++++
T Consensus 82 ~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~--~~v~~~~~~ 159 (316)
T 3bg1_A 82 KVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHT--IGCNAVSWA 159 (316)
T ss_dssp CEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSS--SCBCCCEEC
T ss_pred EEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeecccc--CCcceEEEc
Confidence 99999999874 445554 4558999999875 244444 88999999987532 22333332 233344444
Q ss_pred CC-----------------ccEEEEcCCCCccEEEEEEccCCc---c-----cccCceEEEEeCCCC----CEEEEEeCC
Q 019672 145 LN-----------------ACFLAVPASTTKGSVLVYNVMELH---S-----HCEAPLAAIVLSSNG----MYIATASEQ 195 (337)
Q Consensus 145 ~~-----------------~~~la~~~~~~dg~v~i~d~~~~~---~-----~~~~~i~~~~~s~dg----~~lat~s~d 195 (337)
|+ +.++++++ .|+.|++||+.... . .|..+|.+++|+|++ ++||+|+.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~l~sgs--~D~~v~lWd~~~~~~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D 237 (316)
T 3bg1_A 160 PAVVPGSLIDHPSGQKPNYIKRFASGG--CDNLIKLWKEEEDGQWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD 237 (316)
T ss_dssp CCCCC------CCSCCCCCCCBEECCB--TTSBCCEEEECTTSCEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT
T ss_pred cccCCccccccccccCccccceEEEec--CCCeEEEEEeCCCCccceeeecccCCCceEEEEecCCCCCCCceEEEEcCC
Confidence 43 35778777 59999999997541 2 245889999999987 899999999
Q ss_pred CcEEEEEEcCCCc---e-eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 196 GTIIRVFLVSEAT---K-SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 196 g~~i~vwd~~~~~---~-~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
|+ |+|||+.++. . ...+. .+...|++++|+|+++ +||+++.|++|+||+...
T Consensus 238 ~~-v~iw~~~~~~~~~~~~~~~~--~~~~~v~~v~~sp~g~---~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 238 GR-VFIWTCDDASSNTWSPKLLH--KFNDVVWHVSWSITAN---ILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp CE-EEEEECSSTTCCCCBCCEEE--ECSSCEEEEEECTTTC---CEEEEESSSCEEEEEECT
T ss_pred Ce-EEEEEccCccccchhhhhhh--cCCCcEEEEEEcCCCC---EEEEEcCCCeEEEEEECC
Confidence 98 6999997631 1 11221 2355799999999999 999999999999999753
No 62
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.6e-29 Score=227.27 Aligned_cols=232 Identities=13% Similarity=0.087 Sum_probs=167.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCC-------CcEEEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCc
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSST-------GRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~-------~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~ 75 (337)
|..+|++++|+|++++|++|+.++ ++|||++. .+.+.... ...+..+++.++++.++.++ .|+
T Consensus 57 h~~~v~~v~~sp~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las~s-------~D~ 129 (330)
T 2hes_X 57 HKKAIRSVAWRPHTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLATCS-------RDK 129 (330)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEEEE-------TTS
T ss_pred ccCCEEEEEECCCCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEEEe-------CCC
Confidence 788999999999999999998877 69999853 23333333 34566667766677766555 499
Q ss_pred eEEEEECCCC----CEEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCC--eeeeeecCCCCCceEEEEeeCC
Q 019672 76 RLCLFNTTTG----TALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTL--AILDTIDTVPNLKGLCAFSPSL 145 (337)
Q Consensus 76 ~v~iwd~~~~----~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~--~~~~~~~~~~~~~~~~~~~~~~ 145 (337)
+|++||+... +++..+. +...|.++.|+|+. ++.+. |++|++||+.++ +.+..+..+.. .+.++.++|
T Consensus 130 ~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~--~v~~~~~~~ 207 (330)
T 2hes_X 130 SVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEG--TVWSSDFDK 207 (330)
T ss_dssp CEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECC
T ss_pred EEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCC--cEEEEEecC
Confidence 9999999432 3445554 44589999998764 44444 899999998766 56666765544 455666666
Q ss_pred C--ccEEEEcCCCCccEEEEEEccCCc--------c------cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc-
Q 019672 146 N--ACFLAVPASTTKGSVLVYNVMELH--------S------HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT- 208 (337)
Q Consensus 146 ~--~~~la~~~~~~dg~v~i~d~~~~~--------~------~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~- 208 (337)
+ +.++++++ .|++|++||+.... . .|..+|.+++|++++ +||+++.||+ |+|||..+++
T Consensus 208 ~~~~~~l~s~s--~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~-v~iw~~~~~~~ 283 (330)
T 2hes_X 208 TEGVFRLCSGS--DDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGV-LAVYEEVDGEW 283 (330)
T ss_dssp SSSSCEEEEEE--TTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSC-EEEEEEETTEE
T ss_pred CCCeeEEEEEe--CCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCE-EEEEEcCCCce
Confidence 5 66888887 59999999987541 1 155789999999776 8999999998 6999998874
Q ss_pred -eeEeeccCCcceeEEEEEeec--CCCcccEEEEEeCCCcEEEEecCC
Q 019672 209 -KSYSFRRGTYPSTIFSLSFGQ--SMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 209 -~~~~~~~~~~~~~i~~l~fs~--dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
.+.....++....|.+++|+| +++ +||+|+.||+|+||+++.
T Consensus 284 ~~~~~~~~~h~~~~v~~v~~~~~~~~~---~las~s~Dg~v~~W~~~~ 328 (330)
T 2hes_X 284 KVFAKRALCHGVYEINVVKWLELNGKT---ILATGGDDGIVNFWSLEK 328 (330)
T ss_dssp EEEEEESCTTTTSCEEEEEEC-----C---CEEEEETTSEEEEEEC--
T ss_pred EEEeccccccccceEEEEEEecCCCce---EEEEecCCCcEEEEEecc
Confidence 333332333223799999999 688 899999999999999864
No 63
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.9e-28 Score=216.28 Aligned_cols=266 Identities=13% Similarity=0.121 Sum_probs=199.0
Q ss_pred eEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEe--eC--CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 10 VFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA--VG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 10 v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
+++++||+++ +||+|.++.++|||+++++.+.... .+ .+..+.+.++.+.++..+ .|++|++||++++
T Consensus 28 ~~~l~WS~~~-~lAvg~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~~~~l~sgs-------~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 28 LNLVDWSSGN-VLAVALDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKEGNYLAVGT-------SSAEVQLWDVQQQ 99 (318)
T ss_dssp CBCEEECTTS-EEEEEETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTTSSEEEEEE-------TTSEEEEEETTTT
T ss_pred ceEEEECCCC-EEEEEeCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCCCCEEEEEE-------CCCcEEEeecCCc
Confidence 5679999986 8999998889999999998766543 23 366677777777776554 4999999999999
Q ss_pred CEEEEEEcCC-ceeEEEEcCCeEEEEE-CCeEEEEECCCCe-eeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEE
Q 019672 86 TALRELNFLT-SILAVRLNKKRLVIVL-REKTYIYDANTLA-ILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVL 162 (337)
Q Consensus 86 ~~~~~~~~~~-~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~ 162 (337)
+++..+..+. .+.++...++.++.+. ++.+++|+..... .+..+..+. ..+..+...+++.++++++ .||.|+
T Consensus 100 ~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~l~s~~--~d~~i~ 175 (318)
T 4ggc_A 100 KRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHHHDVRVAEHHVATLSGHS--QEVCGLRWAPDGRHLASGG--NDNLVN 175 (318)
T ss_dssp EEEEEEECCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEEEEEECCS--SCEEEEEECTTSSEEEEEE--TTSCEE
T ss_pred eeEEEecCccceEEEeecCCCEEEEEecCCceEeeecCCCceeEEEEcCcc--CceEEEEEcCCCCEEEEEe--cCccee
Confidence 9998887654 6888888888877777 7899999987653 344444443 3466667777888999887 599999
Q ss_pred EEEccCCccc---------ccCceEEEEeCCCCCEE---EEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecC
Q 019672 163 VYNVMELHSH---------CEAPLAAIVLSSNGMYI---ATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS 230 (337)
Q Consensus 163 i~d~~~~~~~---------~~~~i~~~~~s~dg~~l---at~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~d 230 (337)
+||+.+++.. +.++|.+++++|++..+ ++++.+++ |++||...+....... +...+..+.|+|+
T Consensus 176 iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~-i~lwd~~~~~~~~~~~---~~~~v~~~~~~~~ 251 (318)
T 4ggc_A 176 VWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRH-IRIWNVCSGACLSAVD---AHSQVCSILWSPH 251 (318)
T ss_dssp EEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCE-EEEEETTTCCEEEEEE---CSSCEEEEEEETT
T ss_pred EEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCE-EEEEeccccccccccc---ceeeeeeeeeccc
Confidence 9999876542 22789999999976633 46667886 7999999888766553 2346889999999
Q ss_pred CCcccEEEEEe--CCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCc
Q 019672 231 MQFQDILVATS--SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY 308 (337)
Q Consensus 231 g~~~~~las~s--~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 308 (337)
+. .+++++ .|++|+|||+++.+.... +.. |...+..+.+.+++++|++++.||+
T Consensus 252 ~~---~~~~~sg~~d~~i~iwd~~~~~~~~~-----------l~g----------H~~~V~~l~~spdg~~l~S~s~D~~ 307 (318)
T 4ggc_A 252 YK---ELISGHGFAQNQLVIWKYPTMAKVAE-----------LKG----------HTSRVLSLTMSPDGATVASAAADET 307 (318)
T ss_dssp TT---EEEEEECTTTCCEEEEETTTCCEEEE-----------ECC----------CSSCEEEEEECTTSSCEEEEETTTE
T ss_pred cc---ceEEEEEcCCCEEEEEECCCCcEEEE-----------EcC----------CCCCEEEEEEcCCCCEEEEEecCCe
Confidence 98 776654 799999999986653221 111 1111233344667789999999999
Q ss_pred EEEEEEe
Q 019672 309 FVEYIFS 315 (337)
Q Consensus 309 ~~~~~~~ 315 (337)
|++|++.
T Consensus 308 v~iWd~~ 314 (318)
T 4ggc_A 308 LRLWRCF 314 (318)
T ss_dssp EEEECCS
T ss_pred EEEEECC
Confidence 9999874
No 64
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.97 E-value=5.5e-31 Score=240.15 Aligned_cols=230 Identities=11% Similarity=0.114 Sum_probs=168.5
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCC--cEEEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
+..+|++++|+|+|++|++|+.++ ++|||+.++ +.+.... ...+..+.+.++++.++..+ .|++|++|
T Consensus 10 ~~~~v~~~~~s~~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-------~d~~v~vw 82 (377)
T 3dwl_C 10 LPKPSYEHAFNSQRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCS-------QDRNAYVY 82 (377)
T ss_dssp CSSCCSCCEECSSSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEE-------TTSSEEEC
T ss_pred CCCcEEEEEECCCCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEe-------CCCeEEEE
Confidence 567899999999999999997776 699999887 4444433 34566677777777776655 38999999
Q ss_pred ECCCCC---EEEEE-EcCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCee---eeeecCCCCCceEEEEeeCCCccEE
Q 019672 81 NTTTGT---ALREL-NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAI---LDTIDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 81 d~~~~~---~~~~~-~~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~l 150 (337)
|+.+++ +...+ .+...|.++.|+++. ++++. |+.|++||+++++. ...+.. .+...+.+++++|++.++
T Consensus 83 d~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l 161 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKR-PLRSTILSLDWHPNNVLL 161 (377)
T ss_dssp ------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECS-SCCSCEEEEEECTTSSEE
T ss_pred EcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeec-ccCCCeEEEEEcCCCCEE
Confidence 999877 34433 455689999998753 55555 88999999988763 555554 134567788888899999
Q ss_pred EEcCCCCccEEEEEEccCC------------------cc----cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc
Q 019672 151 AVPASTTKGSVLVYNVMEL------------------HS----HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT 208 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~------------------~~----~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~ 208 (337)
++++ .||.|++||+... +. .|..+|.+++|+|+|++||+++.||+ |++||+.+++
T Consensus 162 ~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~d~~-i~iwd~~~~~ 238 (377)
T 3dwl_C 162 AAGC--ADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVHAVGFSPSGNALAYAGHDSS-VTIAYPSAPE 238 (377)
T ss_dssp EEEE--SSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEEEEEECTTSSCEEEEETTTE-EC-CEECSTT
T ss_pred EEEe--CCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEEEEEECCCCCEEEEEeCCCc-EEEEECCCCC
Confidence 9988 5899999998522 11 24478999999999999999999997 6999999998
Q ss_pred e----eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 209 K----SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 209 ~----~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
. +..+.. +...|.+++|+|+++ +|++++.++.+ +|+..
T Consensus 239 ~~~~~~~~~~~--~~~~v~~~~~s~~~~---~l~~~~~~~~~-~~~~~ 280 (377)
T 3dwl_C 239 QPPRALITVKL--SQLPLRSLLWANESA---IVAAGYNYSPI-LLQGN 280 (377)
T ss_dssp SCEEECCCEEC--SSSCEEEEEEEETTE---EEEEESSSSEE-EECCC
T ss_pred CcceeeEeecC--CCCceEEEEEcCCCC---EEEEEcCCcEE-EEEeC
Confidence 7 555542 356799999999999 89998877666 77665
No 65
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.97 E-value=8.7e-30 Score=237.58 Aligned_cols=278 Identities=9% Similarity=0.061 Sum_probs=181.2
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCc-eEEEeCCCCcE--EEEEe--eCCEEEEEEcc-CCCEEEEEeCCCCCCCCCceE
Q 019672 5 SSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRL--CYERA--VGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRRL 77 (337)
Q Consensus 5 ~~~~~v~~~~fs~-dg~~la~g~~~g-~~vw~~~~~~~--~~~~~--~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~v 77 (337)
+++..|+|++|+| ++++||+|+.+| ++|||+.+++. ..... ...+..+++.+ +++.++.++ .|++|
T Consensus 117 ~~~~~V~~l~~~P~~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s-------~D~~v 189 (435)
T 4e54_B 117 PFDRRATSLAWHPTHPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASS-------MEGTT 189 (435)
T ss_dssp ECSSCEEEEEECSSCTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEEC-------SSSCE
T ss_pred CCCCCEEEEEEeCCCCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEe-------CCCEE
Confidence 4677899999999 567899999887 69999987754 23322 24455566654 345555443 49999
Q ss_pred EEEECCCCCEEEEEEcC---CceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCcc-EE
Q 019672 78 CLFNTTTGTALRELNFL---TSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNAC-FL 150 (337)
Q Consensus 78 ~iwd~~~~~~~~~~~~~---~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l 150 (337)
++||++++........+ ..+.++.++++. ++++. |+.|++||++. +.+..+..+. ..+.+++++|++. ++
T Consensus 190 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~-~~~~~~~~h~--~~v~~v~~~p~~~~~~ 266 (435)
T 4e54_B 190 RLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG-KELWNLRMHK--KKVTHVALNPCCDWFL 266 (435)
T ss_dssp EEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS-CBCCCSBCCS--SCEEEEEECTTCSSEE
T ss_pred EEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc-ceeEEEeccc--ceEEeeeecCCCceEE
Confidence 99999876543333322 256788887764 33333 88999999964 4555665544 3567777777665 56
Q ss_pred EEcCCCCccEEEEEEccCCccc--------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcc---
Q 019672 151 AVPASTTKGSVLVYNVMELHSH--------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYP--- 219 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~~~~--------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~--- 219 (337)
++++ .|+.|+|||+++.+.. |..+|++++|+|+|++|++++.||+ |+|||+.+++.+..+......
T Consensus 267 ~s~s--~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~-i~iwd~~~~~~~~~~~~~~~~~~~ 343 (435)
T 4e54_B 267 ATAS--VDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE-IRVYSASQWDCPLGLIPHPHRHFQ 343 (435)
T ss_dssp EEEE--TTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC-EEEEESSSSSSEEEECCCCCCCCS
T ss_pred EEec--CcceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE-EEEEECCCCccceEEecccccccc
Confidence 6666 5999999999875432 4488999999999999999999998 699999998877665322111
Q ss_pred -eeEEEEEeecCCCcccEEEEEe------------CCCcEEEEecCCCcccCCCCcccccccccccccceeeccccccee
Q 019672 220 -STIFSLSFGQSMQFQDILVATS------------SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHV 286 (337)
Q Consensus 220 -~~i~~l~fs~dg~~~~~las~s------------~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 286 (337)
..+..+.|+|++. ++++++ .+++|+|||+.++..... ........+.+
T Consensus 344 ~~~~~~~~~~~~~~---~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~----------l~~~~~~~v~s------ 404 (435)
T 4e54_B 344 HLTPIKAAWHPRYN---LIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQ----------LYDPESSGISS------ 404 (435)
T ss_dssp SSCCCBCEECSSSS---CEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEE----------ECCSSCCCCCC------
T ss_pred cceeEEEEEcCCCC---EEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEE----------EeCCCCCcEEE------
Confidence 1123345666665 555543 346799999876643211 00000000110
Q ss_pred eeeccCCCcccCEEEEEEeCCcEEEEEEecCC
Q 019672 287 LRNAFPAGVKRASVSVITYNGYFVEYIFSINN 318 (337)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~~ 318 (337)
...+.+++..|+++ .||.|++|++.+.+
T Consensus 405 ---~~~fspdg~~lasg-~d~~i~iW~~~~gk 432 (435)
T 4e54_B 405 ---LNEFNPMGDTLASA-MGYHILIWSQQEAR 432 (435)
T ss_dssp ---EEEECTTSSCEEEE-CSSEEEECCCC---
T ss_pred ---EEEECCCCCEEEEE-cCCcEEEEECCcCe
Confidence 01234455666655 59999999886543
No 66
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.97 E-value=1.1e-28 Score=227.60 Aligned_cols=239 Identities=12% Similarity=0.075 Sum_probs=184.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC-
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT- 83 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~- 83 (337)
+..+|++++|+|++++|++|+.++ +++||+.+++.+.....+...+.++.++++.++..+ .|+.|++||++
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~-------~dg~i~i~d~~~ 205 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGS-------RSGAIHHHDVRI 205 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEE-------TTSEEEEEETTS
T ss_pred CCCCEEEEEECCCCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEc-------CCCCEEEEeccc
Confidence 678899999999999999998877 699999999888777655555555666777666555 48999999998
Q ss_pred CCCEEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCc-cEEEEcCCCCc
Q 019672 84 TGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNA-CFLAVPASTTK 158 (337)
Q Consensus 84 ~~~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~la~~~~~~d 158 (337)
.+..+..+. +...|.++.|+++. ++++. |+.|++||+++++.+..+..+.. .+.+++++|++ .++++++...|
T Consensus 206 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--~v~~~~~~p~~~~ll~~~~gs~d 283 (401)
T 4aez_A 206 ANHQIGTLQGHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNA--AVKAVAWCPWQSNLLATGGGTMD 283 (401)
T ss_dssp SSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSS--CCCEEEECTTSTTEEEEECCTTT
T ss_pred CcceeeEEcCCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcc--eEEEEEECCCCCCEEEEecCCCC
Confidence 455566655 45689999998764 44455 89999999999888888765544 44555666644 45565532259
Q ss_pred cEEEEEEccCCcccc----cCceEEEEeCCCCCEEEEEe--CCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCC
Q 019672 159 GSVLVYNVMELHSHC----EAPLAAIVLSSNGMYIATAS--EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQ 232 (337)
Q Consensus 159 g~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~lat~s--~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~ 232 (337)
+.|++||+.+++... ..+|.+++|+|+|++|++++ .||. |+|||+.+++.........+...|.+++|+|+|+
T Consensus 284 ~~i~i~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~g~~dg~-i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~ 362 (401)
T 4aez_A 284 KQIHFWNAATGARVNTVDAGSQVTSLIWSPHSKEIMSTHGFPDNN-LSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGR 362 (401)
T ss_dssp CEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECTTTCE-EEEEEEETTEEEEEEEEECCSSCCCEEEECTTSS
T ss_pred CEEEEEECCCCCEEEEEeCCCcEEEEEECCCCCeEEEEeecCCCc-EEEEecCCccceeEEEecCCCCCEEEEEECCCCC
Confidence 999999999887653 37899999999999999954 8997 6999999977655543233456799999999999
Q ss_pred cccEEEEEeCCCcEEEEecCCCccc
Q 019672 233 FQDILVATSSSGSLHVFSPGFAINQ 257 (337)
Q Consensus 233 ~~~~las~s~dg~v~iw~l~~~~~~ 257 (337)
+|++++.||+|+||++..++..
T Consensus 363 ---~l~s~~~dg~i~iw~~~~~~~~ 384 (401)
T 4aez_A 363 ---ILSTAASDENLKFWRVYDGDHV 384 (401)
T ss_dssp ---EEEEECTTSEEEEEECCC----
T ss_pred ---EEEEEeCCCcEEEEECCCCccc
Confidence 9999999999999999876543
No 67
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.97 E-value=1.5e-28 Score=256.47 Aligned_cols=297 Identities=12% Similarity=0.100 Sum_probs=218.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|...|++++|+|||++|++|+.++ +++||+.+++.+..... ..+..+.+.++++.++.++. |++|++|
T Consensus 612 ~~h~~~v~~~~~s~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~-------d~~v~vw 684 (1249)
T 3sfz_A 612 RPHTDAVYHACFSQDGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSA-------DKKVKIW 684 (1249)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET-------TSEEEEE
T ss_pred ecccccEEEEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeC-------CCeEEEE
Confidence 46889999999999999999998887 69999999988777654 45666666667777766553 8999999
Q ss_pred ECCCCCEEEEEEcC-CceeEEEEcC--Ce--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcC
Q 019672 81 NTTTGTALRELNFL-TSILAVRLNK--KR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (337)
Q Consensus 81 d~~~~~~~~~~~~~-~~v~~i~~~~--~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 154 (337)
|+.+++.+..+..+ ..|.++.|++ +. ++.+. |+.|++||+.+++.+..+..+.. .+.+++++|++.++++++
T Consensus 685 d~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~--~v~~~~~sp~~~~l~s~s 762 (1249)
T 3sfz_A 685 DSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTN--SVNHCRFSPDDELLASCS 762 (1249)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSS--CEEEEEECSSTTEEEEEE
T ss_pred ECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCC--CEEEEEEecCCCEEEEEE
Confidence 99999999888654 4899999987 33 33333 88999999999998888876544 577777788888999988
Q ss_pred CCCccEEEEEEccCCcc------------------------------------------------------------ccc
Q 019672 155 STTKGSVLVYNVMELHS------------------------------------------------------------HCE 174 (337)
Q Consensus 155 ~~~dg~v~i~d~~~~~~------------------------------------------------------------~~~ 174 (337)
.||.|++||+.++.. .+.
T Consensus 763 --~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~~v~~~d~~~~~~~~~~~~~~~ 840 (1249)
T 3sfz_A 763 --ADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKNKVLLFDIHTSGLLAEIHTGHH 840 (1249)
T ss_dssp --SSSEEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETTEEEEEETTTCCEEEEEECSSS
T ss_pred --CCCeEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCCcEEEEEecCCCceeEEcCCCC
Confidence 599999999875431 122
Q ss_pred CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 175 APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 175 ~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
..|.+++|+|+|+++++++.||. |++||+.+++.+..+.. |...|.+++|+|+|+ +|++++.||+|++|++...
T Consensus 841 ~~v~~~~~sp~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~--h~~~v~~v~~spdg~---~l~s~s~dg~v~vw~~~~~ 914 (1249)
T 3sfz_A 841 STIQYCDFSPYDHLAVIALSQYC-VELWNIDSRLKVADCRG--HLSWVHGVMFSPDGS---SFLTASDDQTIRVWETKKV 914 (1249)
T ss_dssp SCCCEEEECSSTTEEEEECSSSC-EEEEETTTTEEEEEECC--CSSCEEEEEECTTSS---EEEEEETTSCEEEEEHHHH
T ss_pred CceEEEEEcCCCCEEEEEeCCCe-EEEEEcCCCceeeecCC--CccceEEEEECCCCC---EEEEEeCCCeEEEEEcccc
Confidence 57889999999999999999998 69999999998888752 456799999999999 9999999999999998653
Q ss_pred cccCCCCccccccccccc----------ccceeecccccc------eeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 255 INQRRGGRTSSILGSILP----------ESVNEVLDPADH------HVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~----------~~~~~~w~~~~~------~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
...............+.+ ......+..... ......+.+.++++.+++++.||.+++|++...
T Consensus 915 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~ 993 (1249)
T 3sfz_A 915 CKNSAIVLKQEIDVVFQENETMVLAVDNIRGLQLIAGKTGQIDYLPEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNN 993 (1249)
T ss_dssp HSCCSSSEEEEEEEEEETTEEEEEEEESSSSEEEEEESSCCEEEECCSCEEEEEECTTSSEEEEEETTSCCEEEETTTT
T ss_pred ceeeeecccceeeEEEcCCCcEEEEecCCcceEEEecCcceEEEcccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCC
Confidence 222110000000000000 000001110000 001233445677899999999999999988543
No 68
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=4.5e-28 Score=226.29 Aligned_cols=275 Identities=13% Similarity=0.148 Sum_probs=209.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
.++..+|++++|+ ++++++|+.++ +++||+.+++.+.....+...+.++.++++.++..+ .|++|++||+
T Consensus 156 ~~h~~~v~~~~~~--~~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s-------~dg~i~~wd~ 226 (445)
T 2ovr_B 156 VGHTGGVWSSQMR--DNIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGS-------RDATLRVWDI 226 (445)
T ss_dssp CCCSSCEEEEEEE--TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEE-------TTSEEEEEES
T ss_pred cCCCCCEEEEEec--CCEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEecCCEEEEEe-------CCCEEEEEEC
Confidence 4678899999998 56888888776 699999999888777655555556666777766554 4899999999
Q ss_pred CCCCEEEEEEcC-CceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccE
Q 019672 83 TTGTALRELNFL-TSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (337)
Q Consensus 83 ~~~~~~~~~~~~-~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~ 160 (337)
.+++.+..+..+ ..|.++.++++.++++. |+.|++||+++++.+..+..+.. .+.++.+ ++.++++++ .||.
T Consensus 227 ~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~--~d~~ 300 (445)
T 2ovr_B 227 ETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTN--RVYSLQF--DGIHVVSGS--LDTS 300 (445)
T ss_dssp SSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCEEEEEGGGTEEEEEECCCSS--CEEEEEE--CSSEEEEEE--TTSC
T ss_pred CCCcEEEEEcCCcccEEEEEECCCEEEEEcCCCEEEEEECCCCcEeEEecCCCC--ceEEEEE--CCCEEEEEe--CCCe
Confidence 999998887644 58999999888888877 88999999999998888875543 5666676 456888887 5999
Q ss_pred EEEEEccCCcccc-----cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-CcceeEEEEEeecCCCcc
Q 019672 161 VLVYNVMELHSHC-----EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQ 234 (337)
Q Consensus 161 v~i~d~~~~~~~~-----~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-~~~~~i~~l~fs~dg~~~ 234 (337)
|++||+.+++... ...+.++.+ ++++|++|+.||. |++||+++++.+..+... .+...|.+++|+ ++
T Consensus 301 i~i~d~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~-- 373 (445)
T 2ovr_B 301 IRVWDVETGNCIHTLTGHQSLTSGMEL--KDNILVSGNADST-VKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KN-- 373 (445)
T ss_dssp EEEEETTTCCEEEEECCCCSCEEEEEE--ETTEEEEEETTSC-EEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SS--
T ss_pred EEEEECCCCCEEEEEcCCcccEEEEEE--eCCEEEEEeCCCe-EEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CC--
Confidence 9999999887543 367787776 5679999999998 699999999998888532 245679999996 45
Q ss_pred cEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCc----EE
Q 019672 235 DILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY----FV 310 (337)
Q Consensus 235 ~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~----~~ 310 (337)
+|++|+.||+|+|||+.+++..... ...........+| .+.+.+++..+++++.||. +.
T Consensus 374 -~l~s~~~dg~v~iwd~~~~~~~~~~------~~~~~~~~~~~v~----------~~~~s~~~~~la~~~~dg~~~~~l~ 436 (445)
T 2ovr_B 374 -FVITSSDDGTVKLWDLKTGEFIRNL------VTLESGGSGGVVW----------RIRASNTKLVCAVGSRNGTEETKLL 436 (445)
T ss_dssp -EEEEEETTSEEEEEETTTCCEEEEE------EECTTGGGTCEEE----------EEEECSSEEEEEEECSSSSSCCEEE
T ss_pred -EEEEEeCCCeEEEEECCCCceeeee------eccccCCCCceEE----------EEEecCCEEEEEEcccCCCCccEEE
Confidence 9999999999999999876542210 0000001111222 2333566688999999998 99
Q ss_pred EEEEecC
Q 019672 311 EYIFSIN 317 (337)
Q Consensus 311 ~~~~~~~ 317 (337)
+|+++.+
T Consensus 437 v~df~~~ 443 (445)
T 2ovr_B 437 VLDFDVD 443 (445)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999765
No 69
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.97 E-value=1e-28 Score=220.68 Aligned_cols=238 Identities=16% Similarity=0.194 Sum_probs=178.0
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc----EEEEEee--CCEEEEEEccC--CCEEEEEeCCCCCCCCC
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR----LCYERAV--GAFSIVEMLYS--SSLLAIVGAGEQPSLSP 74 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~----~~~~~~~--~~~~~~~~~~~--~~~~~~~~~g~~~~~~d 74 (337)
.+|.++|++++|+|++++|++|+.++ +++||+.++. ....... ..+..+++.+. .+.++.++ .|
T Consensus 8 ~gH~~~v~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~-------~d 80 (351)
T 3f3f_A 8 SGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASAS-------YD 80 (351)
T ss_dssp CCCSSCEEEEEECSSSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEE-------TT
T ss_pred cccccceeEEEEcCCCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEc-------CC
Confidence 57899999999999999999999887 6999998763 3333333 44555565552 55555544 48
Q ss_pred ceEEEEECCCC---------CEEEEEE-cCCceeEEEEcCC----eEEEEE-CCeEEEEECCCCeeeeeec---------
Q 019672 75 RRLCLFNTTTG---------TALRELN-FLTSILAVRLNKK----RLVIVL-REKTYIYDANTLAILDTID--------- 130 (337)
Q Consensus 75 ~~v~iwd~~~~---------~~~~~~~-~~~~v~~i~~~~~----~~~v~~-d~~i~i~d~~~~~~~~~~~--------- 130 (337)
++|++||++++ +++..+. +...|.++.|+++ .++++. |+.|++||+++++.+..+.
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~ 160 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLS 160 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCS
T ss_pred CeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccc
Confidence 99999999887 3455554 4568999999875 345555 8999999998876544332
Q ss_pred --CCCCCceEEEEeeCCC---ccEEEEcCCCCccEEEEEEccCCcc-------cccCceEEEEeCCCC----CEEEEEeC
Q 019672 131 --TVPNLKGLCAFSPSLN---ACFLAVPASTTKGSVLVYNVMELHS-------HCEAPLAAIVLSSNG----MYIATASE 194 (337)
Q Consensus 131 --~~~~~~~~~~~~~~~~---~~~la~~~~~~dg~v~i~d~~~~~~-------~~~~~i~~~~~s~dg----~~lat~s~ 194 (337)
...+...+.++.++|+ +.++++++ .++.+.+|+...... .|..+|++++|+|++ ++|++|+.
T Consensus 161 ~~~~~~~~~~~~~~~~p~~~~~~~l~~~~--~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~ 238 (351)
T 3f3f_A 161 IPPANHLQSDFCLSWCPSRFSPEKLAVSA--LEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCK 238 (351)
T ss_dssp CCCSSCSCCCEEEEECCCSSSCCEEEEEE--TTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEET
T ss_pred cccCCcccceeEEEeccCCCCCcEEEEec--CCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcC
Confidence 1123344566777665 67888887 488898887766543 144899999999998 89999999
Q ss_pred CCcEEEEEEcCCC----------------------------------------------ceeEeeccCCcceeEEEEEee
Q 019672 195 QGTIIRVFLVSEA----------------------------------------------TKSYSFRRGTYPSTIFSLSFG 228 (337)
Q Consensus 195 dg~~i~vwd~~~~----------------------------------------------~~~~~~~~~~~~~~i~~l~fs 228 (337)
||. |++||+.++ +.+..+. .|...|++++|+
T Consensus 239 dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~s 315 (351)
T 3f3f_A 239 DGR-IRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHD--DHNGEVWSVSWN 315 (351)
T ss_dssp TSC-EEEEEEEECC---------------------------------------CCSEEEEEEEEEC--TTSSCEEEEEEC
T ss_pred CCe-EEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEe--cccccEEEEEEc
Confidence 998 699999875 3444443 245679999999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 229 QSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 229 ~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
|+++ +|++++.||+|+||++..+..
T Consensus 316 ~~~~---~l~s~~~dg~v~iw~~~~~~~ 340 (351)
T 3f3f_A 316 LTGT---ILSSAGDDGKVRLWKATYSNE 340 (351)
T ss_dssp SSSC---CEEEEETTSCEEEEEECTTSC
T ss_pred CCCC---EEEEecCCCcEEEEecCcCcc
Confidence 9999 999999999999999987643
No 70
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.97 E-value=1.5e-28 Score=245.69 Aligned_cols=235 Identities=13% Similarity=0.147 Sum_probs=193.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|.+.|++++|+|||++|++|+.++ ++|||+.+++.+..... ..+..+.+.++++.++..+. |+.|++|
T Consensus 10 ~~h~~~v~~i~~sp~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~-------dg~i~vw 82 (814)
T 3mkq_A 10 SNRSDRVKGIDFHPTEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSD-------DFRIRVF 82 (814)
T ss_dssp EEECSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEET-------TSEEEEE
T ss_pred ecCCCceEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeC-------CCeEEEE
Confidence 46788999999999999999999887 69999999987766543 45677777777787776654 8999999
Q ss_pred ECCCCCEEEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCC-eeeeeecCCCCCceEEEEeeCC-CccEEEEcC
Q 019672 81 NTTTGTALRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTL-AILDTIDTVPNLKGLCAFSPSL-NACFLAVPA 154 (337)
Q Consensus 81 d~~~~~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~~la~~~ 154 (337)
|+.+++.+..+. +...|.++.|+++. ++++. |+.|++||+.++ .....+..+. ..+.+++++| ++..+++++
T Consensus 83 ~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~--~~v~~~~~~p~~~~~l~~~~ 160 (814)
T 3mkq_A 83 NYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE--HFVMCVAFNPKDPSTFASGC 160 (814)
T ss_dssp ETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS--SCEEEEEEETTEEEEEEEEE
T ss_pred ECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC--CcEEEEEEEcCCCCEEEEEe
Confidence 999999998887 45689999998875 44444 789999999876 5555665443 3567777777 677888887
Q ss_pred CCCccEEEEEEccCCcccc------cCceEEEEeCC--CCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEE
Q 019672 155 STTKGSVLVYNVMELHSHC------EAPLAAIVLSS--NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLS 226 (337)
Q Consensus 155 ~~~dg~v~i~d~~~~~~~~------~~~i~~~~~s~--dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~ 226 (337)
.||.|++||+.+..... ..++.+++|+| ++.+|++++.||+ |++||+.+++.+..+.. +...|.+++
T Consensus 161 --~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~-i~~~d~~~~~~~~~~~~--~~~~v~~~~ 235 (814)
T 3mkq_A 161 --LDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLT-IKIWDYQTKSCVATLEG--HMSNVSFAV 235 (814)
T ss_dssp --TTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSE-EEEEETTTTEEEEEEEC--CSSCEEEEE
T ss_pred --CCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCE-EEEEECCCCcEEEEEcC--CCCCEEEEE
Confidence 59999999998765432 27899999999 9999999999997 69999999998888753 356799999
Q ss_pred eecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 227 FGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 227 fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
|+|+++ +|++++.||+|++||+.+..
T Consensus 236 ~~~~~~---~l~~~~~dg~v~vwd~~~~~ 261 (814)
T 3mkq_A 236 FHPTLP---IIISGSEDGTLKIWNSSTYK 261 (814)
T ss_dssp ECSSSS---EEEEEETTSCEEEEETTTCS
T ss_pred EcCCCC---EEEEEeCCCeEEEEECCCCc
Confidence 999999 99999999999999997654
No 71
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=1.9e-28 Score=229.78 Aligned_cols=268 Identities=10% Similarity=0.148 Sum_probs=191.4
Q ss_pred CCCCC-eEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 5 SSSYP-VFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 5 ~~~~~-v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
+|..+ ++++.| ++++|++|+.++ +++||+.+++.+.....+.-.+.++.+.++..+++++ .|++|++||+
T Consensus 119 ~h~~~v~~~~~~--~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~~l~s~s------~dg~i~vwd~ 190 (464)
T 3v7d_B 119 GHMTSVITCLQF--EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGS------TDRTVRVWDI 190 (464)
T ss_dssp CCSSSCEEEEEE--ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTTEEEEEE------TTSCEEEEET
T ss_pred CCCCCcEEEEEE--CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCCEEEEEe------CCCCEEEEEC
Confidence 45555 577776 567899998877 6999999999887765544444444444332333333 5999999999
Q ss_pred CCCCEEEEEE-cCCceeEEEEc--CC--eEEEEE-CCeEEEEECCCCeeee-----------------------eecCCC
Q 019672 83 TTGTALRELN-FLTSILAVRLN--KK--RLVIVL-REKTYIYDANTLAILD-----------------------TIDTVP 133 (337)
Q Consensus 83 ~~~~~~~~~~-~~~~v~~i~~~--~~--~~~v~~-d~~i~i~d~~~~~~~~-----------------------~~~~~~ 133 (337)
++++.+..+. +...|.++.++ ++ .++++. |+.|++||+++++... .+..
T Consensus 191 ~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 268 (464)
T 3v7d_B 191 KKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRG-- 268 (464)
T ss_dssp TTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECC--
T ss_pred CCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccC--
Confidence 9999888887 45689999886 33 344444 8999999998765322 2222
Q ss_pred CCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc
Q 019672 134 NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT 208 (337)
Q Consensus 134 ~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~ 208 (337)
+...+.+++++ +.++++++ .||.|++||+.+++.. |..+|.+++|+|+|++|++|+.||+ |++||+++++
T Consensus 269 ~~~~v~~~~~~--~~~l~~~~--~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~-i~vwd~~~~~ 343 (464)
T 3v7d_B 269 HMASVRTVSGH--GNIVVSGS--YDNTLIVWDVAQMKCLYILSGHTDRIYSTIYDHERKRCISASMDTT-IRIWDLENGE 343 (464)
T ss_dssp CSSCEEEEEEE--TTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEETTTTEEEEEETTSC-EEEEETTTTE
T ss_pred ccceEEEEcCC--CCEEEEEe--CCCeEEEEECCCCcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCc-EEEEECCCCc
Confidence 23345566544 55888887 5999999999987754 3488999999999999999999998 6999999999
Q ss_pred eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeee
Q 019672 209 KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLR 288 (337)
Q Consensus 209 ~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 288 (337)
.+.++.. +...|.+++|+ ++ +|++++.||+|++||+.+...... . ..+...
T Consensus 344 ~~~~~~~--h~~~v~~~~~~--~~---~l~s~s~dg~v~vwd~~~~~~~~~--------~-~~~~~~------------- 394 (464)
T 3v7d_B 344 LMYTLQG--HTALVGLLRLS--DK---FLVSAAADGSIRGWDANDYSRKFS--------Y-HHTNLS------------- 394 (464)
T ss_dssp EEEEECC--CSSCEEEEEEC--SS---EEEEEETTSEEEEEETTTCCEEEE--------E-ECTTCC-------------
T ss_pred EEEEEeC--CCCcEEEEEEc--CC---EEEEEeCCCcEEEEECCCCceeee--------e-cCCCCc-------------
Confidence 9988853 45679999998 45 899999999999999986543210 0 000000
Q ss_pred eccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 289 NAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
..+.+.+++..+++++ ||.+++|++.+.
T Consensus 395 ~~~~~~~~~~~l~~~~-dg~i~iwd~~~g 422 (464)
T 3v7d_B 395 AITTFYVSDNILVSGS-ENQFNIYNLRSG 422 (464)
T ss_dssp CEEEEEECSSEEEEEE-TTEEEEEETTTC
T ss_pred cEEEEEeCCCEEEEec-CCeEEEEECCCC
Confidence 0111233446666666 999999988543
No 72
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=2.9e-28 Score=215.82 Aligned_cols=248 Identities=9% Similarity=0.095 Sum_probs=172.9
Q ss_pred eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC--CEEEEEE-cCCceeEEEEcC----CeEEEEE-CCeEEE
Q 019672 46 VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG--TALRELN-FLTSILAVRLNK----KRLVIVL-REKTYI 117 (337)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~--~~~~~~~-~~~~v~~i~~~~----~~~~v~~-d~~i~i 117 (337)
...+..+++.++++.++..+ .|++|+|||+..+ +++.++. |..+|.+++|++ +.++.+. |++|++
T Consensus 9 ~~~V~~~~~s~~g~~las~s-------~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~i 81 (297)
T 2pm7_B 9 NEMIHDAVMDYYGKRMATCS-------SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMI 81 (297)
T ss_dssp SSCEEEEEECTTSSEEEEEE-------TTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEE
T ss_pred cCceEEEEECCCCCEEEEEe-------CCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEE
Confidence 34566677777777776655 4999999999743 5666665 445899999964 3455555 899999
Q ss_pred EECCCCe--eeeeecCCCCCceEEEEeeCCC--ccEEEEcCCCCccEEEEEEccCCcc-------cccCceEEEEeCCC-
Q 019672 118 YDANTLA--ILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELHS-------HCEAPLAAIVLSSN- 185 (337)
Q Consensus 118 ~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~la~~~~~~dg~v~i~d~~~~~~-------~~~~~i~~~~~s~d- 185 (337)
||+++++ .+..+..+. ..+.+++++|+ +.++++++ .||.|++||+++... .|...|++++|+|+
T Consensus 82 Wd~~~~~~~~~~~~~~h~--~~v~~v~~~p~~~g~~l~s~s--~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~~ 157 (297)
T 2pm7_B 82 WKEENGRWSQIAVHAVHS--ASVNSVQWAPHEYGPMLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (297)
T ss_dssp EEBSSSCBCCCEEECCCS--SCEEEEEECCGGGCSEEEEEE--TTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCCC
T ss_pred EEcCCCceEEEEEeecCC--CceeEEEeCcCCCCcEEEEEE--CCCcEEEEEecCCCceeeeeeecccCccceEeecCCc
Confidence 9998764 334444333 34666666665 67888887 599999999986531 24478999999997
Q ss_pred ------------CCEEEEEeCCCcEEEEEEcCCCc----eeEeeccCCcceeEEEEEeecCC---CcccEEEEEeCCCcE
Q 019672 186 ------------GMYIATASEQGTIIRVFLVSEAT----KSYSFRRGTYPSTIFSLSFGQSM---QFQDILVATSSSGSL 246 (337)
Q Consensus 186 ------------g~~lat~s~dg~~i~vwd~~~~~----~~~~~~~~~~~~~i~~l~fs~dg---~~~~~las~s~dg~v 246 (337)
+++||+|+.||+ |+|||+++++ .+..+. + |...|.+|+|+|++ + +||+++.|++|
T Consensus 158 ~~~~~~~~~~~~~~~l~sgs~D~~-v~lwd~~~~~~~~~~~~~l~-~-H~~~V~~v~~sp~~~~~~---~las~s~D~~v 231 (297)
T 2pm7_B 158 IEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLE-G-HSDWVRDVAWSPTVLLRS---YMASVSQDRTC 231 (297)
T ss_dssp ------------CCEEEEEETTSC-EEEEEEETTTTEEEEEEEEC-C-CSSCEEEEEECCCCSSSE---EEEEEETTSCE
T ss_pred ccccccCCCCCCcceEEEEcCCCc-EEEEEEcCCCceEEEEEEec-C-CCCceEEEEECCCCCCce---EEEEEECCCcE
Confidence 579999999998 6999998876 444553 2 46679999999995 6 99999999999
Q ss_pred EEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecCCCCeeceEE
Q 019672 247 HVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSINNCCESTWTL 326 (337)
Q Consensus 247 ~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~~~~~~~~~~ 326 (337)
+|||++....+.. ...+. .......+ ..+.+.++++.|++++.||.+++|+...+ + .|..
T Consensus 232 ~iWd~~~~~~~~~----~~~~~--~~~~~~~v----------~~~~~s~~g~~las~~~D~~v~lw~~~~~-g---~w~~ 291 (297)
T 2pm7_B 232 IIWTQDNEQGPWK----KTLLK--EEKFPDVL----------WRASWSLSGNVLALSGGDNKVTLWKENLE-G---KWEP 291 (297)
T ss_dssp EEEEESSTTSCCE----EEESS--SSCCSSCE----------EEEEECSSSCCEEEEETTSCEEEEEECTT-S---CEEE
T ss_pred EEEEeCCCCCccc----eeeee--cccCCCcE----------EEEEECCCCCEEEEEcCCCcEEEEEECCC-C---cEEe
Confidence 9999976432110 00000 00000112 22334566789999999999999998643 2 3666
Q ss_pred eeee
Q 019672 327 DREF 330 (337)
Q Consensus 327 ~~~~ 330 (337)
..++
T Consensus 292 ~~~~ 295 (297)
T 2pm7_B 292 AGEV 295 (297)
T ss_dssp C---
T ss_pred cccc
Confidence 5544
No 73
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.97 E-value=9.8e-28 Score=214.23 Aligned_cols=228 Identities=11% Similarity=0.113 Sum_probs=185.6
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc--EEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR--LCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
.+..+|++++|+|++++|++|+.++ +++||+.+++ ....... ..+..+.+.++.+.++..+ .|+.|++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~-------~dg~v~~ 167 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCC-------SDGNIAV 167 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEE-------TTSCEEE
T ss_pred CCCCcEEEEEEcCCCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEe-------CCCcEEE
Confidence 5778899999999999999998877 6999999886 3333332 3456666766667766554 3899999
Q ss_pred EECCCCCEEEEEEc-CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCC
Q 019672 80 FNTTTGTALRELNF-LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS 155 (337)
Q Consensus 80 wd~~~~~~~~~~~~-~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (337)
||+++++.+..+.. ...|.++.++++. ++++. |+.|++||+++++.+..+.. ...+.+++++|++.++++++
T Consensus 168 ~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~---~~~v~~~~~s~~~~~l~~~~- 243 (337)
T 1gxr_A 168 WDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDF---TSQIFSLGYCPTGEWLAVGM- 243 (337)
T ss_dssp EETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEEC---SSCEEEEEECTTSSEEEEEE-
T ss_pred EeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecC---CCceEEEEECCCCCEEEEEc-
Confidence 99999998888764 5589999998764 45555 88999999999988877653 23467778888888999887
Q ss_pred CCccEEEEEEccCCccc----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCC
Q 019672 156 TTKGSVLVYNVMELHSH----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSM 231 (337)
Q Consensus 156 ~~dg~v~i~d~~~~~~~----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg 231 (337)
.+|.|++||+.+.+.. +..+|.+++|+|+|++|++++.||. |++||+.+++.+.... +...|.+++|+|++
T Consensus 244 -~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-i~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~ 318 (337)
T 1gxr_A 244 -ESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL-LNAWRTPYGASIFQSK---ESSSVLSCDISVDD 318 (337)
T ss_dssp -TTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEE---CSSCEEEEEECTTS
T ss_pred -CCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCCCc-EEEEECCCCeEEEEec---CCCcEEEEEECCCC
Confidence 5899999999877643 3488999999999999999999997 6999999998875543 34579999999999
Q ss_pred CcccEEEEEeCCCcEEEEec
Q 019672 232 QFQDILVATSSSGSLHVFSP 251 (337)
Q Consensus 232 ~~~~~las~s~dg~v~iw~l 251 (337)
+ +|++++.||.|++|++
T Consensus 319 ~---~l~~~~~dg~i~iw~~ 335 (337)
T 1gxr_A 319 K---YIVTGSGDKKATVYEV 335 (337)
T ss_dssp C---EEEEEETTSCEEEEEE
T ss_pred C---EEEEecCCCeEEEEEE
Confidence 9 9999999999999997
No 74
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-29 Score=233.36 Aligned_cols=277 Identities=12% Similarity=0.153 Sum_probs=199.1
Q ss_pred CCeEEEEEcCCCC-EEEEE----------cCCc-eEEEeCCCCc---EEEEE-eeCCEEEEEEccCCCEEEEEeCCCCCC
Q 019672 8 YPVFFVSFNQDNS-GFALS----------TKDG-FKIFDSSTGR---LCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPS 71 (337)
Q Consensus 8 ~~v~~~~fs~dg~-~la~g----------~~~g-~~vw~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~ 71 (337)
.+|++++|+|+|+ +|++| +.++ ++|||+.+++ .+... +...+..+.+.++...++..+
T Consensus 13 ~~v~~~~~sp~g~~~l~~g~~~g~~~~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~------ 86 (416)
T 2pm9_A 13 SRTATFAWSHDKIPLLVSGTVSGTVDANFSTDSSLELWSLLAADSEKPIASLQVDSKFNDLDWSHNNKIIAGAL------ 86 (416)
T ss_dssp EESCBCCBCSSSSCEEEEBCBSSCCCSSCCCCCCCEEEESSSGGGCSCSCCCCCSSCEEEEEECSSSSCEEEEE------
T ss_pred hhcceEeeCCCCCCEEEEEecCcccccccCCCCeEEEEEccCCCCCcEEEEEecCCceEEEEECCCCCeEEEEc------
Confidence 4688999999997 88888 6665 6999998875 22222 234566777777777776654
Q ss_pred CCCceEEEEECCC----CCEEEEEE-cCCceeEEEEcCC---eEEEEE-CCeEEEEECCCCe------eeeee-cCCCCC
Q 019672 72 LSPRRLCLFNTTT----GTALRELN-FLTSILAVRLNKK---RLVIVL-REKTYIYDANTLA------ILDTI-DTVPNL 135 (337)
Q Consensus 72 ~~d~~v~iwd~~~----~~~~~~~~-~~~~v~~i~~~~~---~~~v~~-d~~i~i~d~~~~~------~~~~~-~~~~~~ 135 (337)
.|+.|++||+.+ .+.+..+. +...|.++.|+++ .++++. |+.|++||+.+++ ....+ ....+.
T Consensus 87 -~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~ 165 (416)
T 2pm9_A 87 -DNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSV 165 (416)
T ss_dssp -SSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSS
T ss_pred -cCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCC
Confidence 389999999987 34666654 4568999999865 344444 8899999998876 32222 111233
Q ss_pred ceEEEEeeCCC-ccEEEEcCCCCccEEEEEEccCCcccc-----------cCceEEEEeCCCC-CEEEEEeCCC---cEE
Q 019672 136 KGLCAFSPSLN-ACFLAVPASTTKGSVLVYNVMELHSHC-----------EAPLAAIVLSSNG-MYIATASEQG---TII 199 (337)
Q Consensus 136 ~~~~~~~~~~~-~~~la~~~~~~dg~v~i~d~~~~~~~~-----------~~~i~~~~~s~dg-~~lat~s~dg---~~i 199 (337)
..+.+++++|+ +.++++++ .||.|++||+.+.+... ..+|.+++|+|++ .+|++++.|| . |
T Consensus 166 ~~v~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~-i 242 (416)
T 2pm9_A 166 DEVISLAWNQSLAHVFASAG--SSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS-I 242 (416)
T ss_dssp CCCCEEEECSSCTTEEEEES--SSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC-C
T ss_pred CCeeEEEeCCCCCcEEEEEc--CCCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce-E
Confidence 45667777777 67888877 59999999998876432 4679999999997 6999999998 8 6
Q ss_pred EEEEcCCC-ceeEeeccCCcceeEEEEEeec-CCCcccEEEEEeCCCcEEEEecCCCcccCCCCccccccccccccccee
Q 019672 200 RVFLVSEA-TKSYSFRRGTYPSTIFSLSFGQ-SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNE 277 (337)
Q Consensus 200 ~vwd~~~~-~~~~~~~~~~~~~~i~~l~fs~-dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (337)
++||++++ +.+..+..+ +...|.+++|+| +++ +|++++.||+|+|||+++.+.... +......
T Consensus 243 ~~~d~~~~~~~~~~~~~~-~~~~v~~~~~s~~~~~---~l~s~~~dg~v~~wd~~~~~~~~~-----------~~~~~~~ 307 (416)
T 2pm9_A 243 LIWDLRNANTPLQTLNQG-HQKGILSLDWCHQDEH---LLLSSGRDNTVLLWNPESAEQLSQ-----------FPARGNW 307 (416)
T ss_dssp CEEETTSTTSCSBCCCSC-CSSCEEEEEECSSCSS---CEEEEESSSEEEEECSSSCCEEEE-----------EECSSSC
T ss_pred EEEeCCCCCCCcEEeecC-ccCceeEEEeCCCCCC---eEEEEeCCCCEEEeeCCCCcccee-----------ecCCCCc
Confidence 99999987 444544312 456799999999 888 999999999999999987543221 0000001
Q ss_pred ecccccceeeeeccCCCccc-CEEEEEEeCCcEEEEEEecCCC
Q 019672 278 VLDPADHHVLRNAFPAGVKR-ASVSVITYNGYFVEYIFSINNC 319 (337)
Q Consensus 278 ~w~~~~~~~~~~~~~~~~~~-~~l~~~~~dg~~~~~~~~~~~~ 319 (337)
+ ..+.+.+++ ..|++++.||.+++|++...+.
T Consensus 308 v----------~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~ 340 (416)
T 2pm9_A 308 C----------FKTKFAPEAPDLFACASFDNKIEVQTLQNLTN 340 (416)
T ss_dssp C----------CCEEECTTCTTEEEECCSSSEEEEEESCCCCC
T ss_pred e----------EEEEECCCCCCEEEEEecCCcEEEEEccCCCC
Confidence 1 122334555 6899999999999999976543
No 75
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=3.2e-28 Score=239.97 Aligned_cols=232 Identities=15% Similarity=0.180 Sum_probs=182.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|...|++++|+|+|++|++|+.++ ++|||+.+++.+..... ..+..+++.++.+.++.++ .|++|++|
T Consensus 427 ~~h~~~v~~v~~s~~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s-------~D~~i~iw 499 (694)
T 3dm0_A 427 TGHSHFVEDVVLSSDGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSAS-------RDRTIKLW 499 (694)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE-------TTSCEEEE
T ss_pred cCCCCcEEEEEECCCCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEe-------CCCEEEEE
Confidence 36888999999999999999999887 69999999987766544 4566666666677766555 49999999
Q ss_pred ECCCCCEEEEEE-----cCCceeEEEEcCCe----EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEE
Q 019672 81 NTTTGTALRELN-----FLTSILAVRLNKKR----LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 81 d~~~~~~~~~~~-----~~~~v~~i~~~~~~----~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (337)
|..... ...+. |...|.++.|+++. ++.+. |+.|++||+++.+....+..|.. .+.+++++|++.++
T Consensus 500 d~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~--~v~~v~~spdg~~l 576 (694)
T 3dm0_A 500 NTLGEC-KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTG--YVSTVAVSPDGSLC 576 (694)
T ss_dssp CTTSCE-EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSS--CEEEEEECTTSSEE
T ss_pred ECCCCc-ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCC--CEEEEEEeCCCCEE
Confidence 986543 33332 33469999998763 44444 89999999999988888865543 57778888889999
Q ss_pred EEcCCCCccEEEEEEccCCccccc----CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCc--------
Q 019672 151 AVPASTTKGSVLVYNVMELHSHCE----APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY-------- 218 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~~~~~~----~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~-------- 218 (337)
++++ .||.|++||+.+++.+.. ..|.+++|+|++.+|++++.+ . |+|||+++++.+..+.....
T Consensus 577 ~sg~--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~-~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~ 652 (694)
T 3dm0_A 577 ASGG--KDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEH-G-IKIWDLESKSIVEDLKVDLKAEAEKADN 652 (694)
T ss_dssp EEEE--TTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETT-E-EEEEETTTTEEEEEECCCCC--------
T ss_pred EEEe--CCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCC-C-EEEEECCCCCChhhhccccccccccccc
Confidence 9988 599999999998876533 789999999999998887765 4 69999999988876642110
Q ss_pred ---------ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 219 ---------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 219 ---------~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
...+.+++|||||+ +|++|+.||+|+||++.
T Consensus 653 ~~~~~~~~~~~~~~~l~~spdg~---~l~sgs~Dg~i~iW~i~ 692 (694)
T 3dm0_A 653 SGPAATKRKVIYCTSLNWSADGS---TLFSGYTDGVIRVWGIG 692 (694)
T ss_dssp --------CCCCEEEEEECTTSS---EEEEEETTSEEEEEEC-
T ss_pred cccccCCceeEEeeeEEEcCCCC---EEEEEcCCCeEEEEecc
Confidence 01278999999999 99999999999999985
No 76
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.97 E-value=1.7e-27 Score=213.29 Aligned_cols=236 Identities=14% Similarity=0.136 Sum_probs=181.3
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+|..+|++++|+|||++|++|+.++ +++|+............ .......+....+.++..+ .|+.+++|
T Consensus 83 ~~h~~~V~~~~~s~dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s-------~d~~~~~~ 155 (340)
T 4aow_A 83 RGHSHFVSDVVISSDGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGS-------RDKTIKLW 155 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEE-------TTSCEEEE
T ss_pred eCCCCCEEEEEECCCCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeec-------CCCeEEEE
Confidence 46788999999999999999999887 59999988876555433 3444555555666665544 48999999
Q ss_pred ECCCCCEEEEE--EcCCceeEEEEcCC---eEEE-EE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEc
Q 019672 81 NTTTGTALREL--NFLTSILAVRLNKK---RLVI-VL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 81 d~~~~~~~~~~--~~~~~v~~i~~~~~---~~~v-~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 153 (337)
|.......... .+...+..+.++++ .+++ +. |+.|++||+++++.+..+..+.. .+.+++++|++.+++++
T Consensus 156 d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~--~v~~~~~s~~~~~l~s~ 233 (340)
T 4aow_A 156 NTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTG--YLNTVTVSPDGSLCASG 233 (340)
T ss_dssp CTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSS--CEEEEEECTTSSEEEEE
T ss_pred EeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCC--cEEEEEECCCCCEEEEE
Confidence 98766543322 23457888888643 2333 33 88999999999998888865543 57778888899999998
Q ss_pred CCCCccEEEEEEccCCccccc----CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-------CcceeE
Q 019672 154 ASTTKGSVLVYNVMELHSHCE----APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-------TYPSTI 222 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~~~----~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-------~~~~~i 222 (337)
+ .||.|++||+.+.+.... ..|.+++|+|++.++ +++.|+. |+|||++++..+..+... .+...|
T Consensus 234 s--~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~-~~~~d~~-i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v 309 (340)
T 4aow_A 234 G--KDGQAMLWDLNEGKHLYTLDGGDIINALCFSPNRYWL-CAATGPS-IKIWDLEGKIIVDELKQEVISTSSKAEPPQC 309 (340)
T ss_dssp E--TTCEEEEEETTTTEEEEEEECSSCEEEEEECSSSSEE-EEEETTE-EEEEETTTTEEEEEECCC-------CCCCCE
T ss_pred e--CCCeEEEEEeccCceeeeecCCceEEeeecCCCCcee-eccCCCE-EEEEECCCCeEEEeccccceeeeccCCCCCE
Confidence 8 599999999998876533 789999999998755 5566887 699999998877766421 245579
Q ss_pred EEEEeecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 223 FSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 223 ~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
++|+|+|||+ +|++|+.||+|+|||++++.
T Consensus 310 ~~l~~s~dg~---~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 310 TSLAWSADGQ---TLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp EEEEECTTSS---EEEEEETTSCEEEEEEEC--
T ss_pred EEEEECCCCC---EEEEEeCCCEEEEEeCCCcC
Confidence 9999999999 99999999999999998764
No 77
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.97 E-value=4.1e-28 Score=219.15 Aligned_cols=278 Identities=8% Similarity=0.080 Sum_probs=201.0
Q ss_pred CCCCCCCeEEEEEcCC---CCEEEEEcCCc-eEEEeCCC-CcEE-EEE--eeCCEEEEEEccCCCEEEEEeCCCCCCCCC
Q 019672 3 NQSSSYPVFFVSFNQD---NSGFALSTKDG-FKIFDSST-GRLC-YER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~d---g~~la~g~~~g-~~vw~~~~-~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (337)
..+|.++|++++|+|+ |++|++|+.++ +++||+.+ ++.+ ... +...+..+.+.++.+.++.++ .|
T Consensus 35 ~~~h~~~v~~~~~~~~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~-------~d 107 (368)
T 3mmy_A 35 TSSPDDSIGCLSFSPPTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTAS-------CD 107 (368)
T ss_dssp SSCCSSCEEEEEECCTTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEE-------TT
T ss_pred ccCCCCceEEEEEcCCCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEc-------CC
Confidence 3578899999999999 69999999887 69999987 4443 333 345567777777777776655 48
Q ss_pred ceEEEEECCCCCEEEEEEcCCceeEEEE--cCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccE
Q 019672 75 RRLCLFNTTTGTALRELNFLTSILAVRL--NKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~~v~~i~~--~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
+.|++||+++++.+....+..+|.++.| +++. ++++. |+.|++||+++++.+..+..+. ...++.+.++ .
T Consensus 108 g~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~---~~~~~~~~~~--~ 182 (368)
T 3mmy_A 108 KTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPE---RCYCADVIYP--M 182 (368)
T ss_dssp SEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSS---CEEEEEEETT--E
T ss_pred CcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCC---CceEEEecCC--e
Confidence 9999999999998888888889999999 7765 44444 8999999999998888876543 3555565544 4
Q ss_pred EEEcCCCCccEEEEEEccCCccc-------ccCceEEEEeCCCCCE----EEEEeCCCcEEEEEEcCCC---ceeEeecc
Q 019672 150 LAVPASTTKGSVLVYNVMELHSH-------CEAPLAAIVLSSNGMY----IATASEQGTIIRVFLVSEA---TKSYSFRR 215 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~-------~~~~i~~~~~s~dg~~----lat~s~dg~~i~vwd~~~~---~~~~~~~~ 215 (337)
+++++ .++.+.+||+...... ....+.++++.+++.. +++++.||. |++||+... +.+..+..
T Consensus 183 ~~~~~--~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~-i~i~~~~~~~~~~~~~~~~~ 259 (368)
T 3mmy_A 183 AVVAT--AERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGR-VAIHYINPPNPAKDNFTFKC 259 (368)
T ss_dssp EEEEE--GGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSE-EEEEESSCSCHHHHSEEEEC
T ss_pred eEEEe--CCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCc-EEEEecCCCCccccceeeee
Confidence 44444 3899999999875432 1256677777665554 999999997 699999887 44555532
Q ss_pred CCc----------ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccce
Q 019672 216 GTY----------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHH 285 (337)
Q Consensus 216 ~~~----------~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~ 285 (337)
+.. ...|.+++|+|+++ +|++++.||.|+|||+.+...... +.. +.
T Consensus 260 ~~~~~~~~~~~~~~~~v~~~~~sp~~~---~l~s~~~dg~i~iwd~~~~~~~~~-----------~~~----------~~ 315 (368)
T 3mmy_A 260 HRSNGTNTSAPQDIYAVNGIAFHPVHG---TLATVGSDGRFSFWDKDARTKLKT-----------SEQ----------LD 315 (368)
T ss_dssp SEEC----CCCEEECCEEEEEECTTTC---CEEEEETTSCEEEEETTTTEEEEE-----------CCC----------CS
T ss_pred eecccccccccccccceEEEEEecCCC---EEEEEccCCeEEEEECCCCcEEEE-----------ecC----------CC
Confidence 211 01599999999999 999999999999999986543221 110 00
Q ss_pred eeeeccCCCcccCEEEEEEeCCcEEEEEEecCCC
Q 019672 286 VLRNAFPAGVKRASVSVITYNGYFVEYIFSINNC 319 (337)
Q Consensus 286 ~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~~~ 319 (337)
..+..+.+.+++.+|++++.||..+.|.+...+.
T Consensus 316 ~~v~~~~~s~~g~~l~~~s~d~~~~~~~~~~~~~ 349 (368)
T 3mmy_A 316 QPISACCFNHNGNIFAYASSYDWSKGHEFYNPQK 349 (368)
T ss_dssp SCEEEEEECTTSSCEEEEECCCSTTCGGGCCTTS
T ss_pred CCceEEEECCCCCeEEEEecccccccccccCCCc
Confidence 1122334456678999999999777776654433
No 78
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.97 E-value=8.2e-28 Score=224.52 Aligned_cols=268 Identities=12% Similarity=0.114 Sum_probs=201.4
Q ss_pred CCCCC-eEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 5 SSSYP-VFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 5 ~~~~~-v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
+|.+. +++++ ++|++|++|+.++ +++||+.+++.+.....+...+.++.++++.++..+ .|++|++||+
T Consensus 116 ~h~~~v~~~~~--~~g~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~-------~dg~i~vwd~ 186 (445)
T 2ovr_B 116 GHDDHVITCLQ--FCGNRIVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGS-------TDRTLKVWNA 186 (445)
T ss_dssp CSTTSCEEEEE--EETTEEEEEETTSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEE-------TTSCEEEEET
T ss_pred ccCCCcEEEEE--EcCCEEEEEECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEe-------CCCeEEEEEC
Confidence 45665 46555 5688999998887 699999999988777655555556666677666554 4999999999
Q ss_pred CCCCEEEEEEc-CCceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccE
Q 019672 83 TTGTALRELNF-LTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (337)
Q Consensus 83 ~~~~~~~~~~~-~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~ 160 (337)
++++.+..+.. ...|.++.++++.++++. |+.|++||+.+++.+..+..+.. .+.++++ ++.++++++ .||.
T Consensus 187 ~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~--~v~~~~~--~~~~l~~~~--~dg~ 260 (445)
T 2ovr_B 187 ETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVA--AVRCVQY--DGRRVVSGA--YDFM 260 (445)
T ss_dssp TTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSS--CEEEEEE--CSSCEEEEE--TTSC
T ss_pred CcCcEEEEECCCCCcEEEEEecCCEEEEEeCCCEEEEEECCCCcEEEEEcCCcc--cEEEEEE--CCCEEEEEc--CCCE
Confidence 99998888764 458999999999888887 89999999999988888875544 4666666 355778777 5999
Q ss_pred EEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCccc
Q 019672 161 VLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQD 235 (337)
Q Consensus 161 v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~ 235 (337)
|++||+.+++.. |..+|.+++| ++++|++|+.||. |++||+++++.+..+.. +...+.++.++ ++
T Consensus 261 i~iwd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~d~~-i~i~d~~~~~~~~~~~~--~~~~v~~~~~~--~~--- 330 (445)
T 2ovr_B 261 VKVWDPETETCLHTLQGHTNRVYSLQF--DGIHVVSGSLDTS-IRVWDVETGNCIHTLTG--HQSLTSGMELK--DN--- 330 (445)
T ss_dssp EEEEEGGGTEEEEEECCCSSCEEEEEE--CSSEEEEEETTSC-EEEEETTTCCEEEEECC--CCSCEEEEEEE--TT---
T ss_pred EEEEECCCCcEeEEecCCCCceEEEEE--CCCEEEEEeCCCe-EEEEECCCCCEEEEEcC--CcccEEEEEEe--CC---
Confidence 999999887654 3488999999 7899999999998 69999999999888753 34567777764 66
Q ss_pred EEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEe
Q 019672 236 ILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFS 315 (337)
Q Consensus 236 ~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~ 315 (337)
+|++++.||+|++||+.+........... .....+ ..+.+ +++.|++++.||.+++|++.
T Consensus 331 ~l~~~~~dg~i~vwd~~~~~~~~~~~~~~--------~~~~~v----------~~~~~--~~~~l~s~~~dg~v~iwd~~ 390 (445)
T 2ovr_B 331 ILVSGNADSTVKIWDIKTGQCLQTLQGPN--------KHQSAV----------TCLQF--NKNFVITSSDDGTVKLWDLK 390 (445)
T ss_dssp EEEEEETTSCEEEEETTTCCEEEEECSTT--------SCSSCE----------EEEEE--CSSEEEEEETTSEEEEEETT
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEEccCC--------CCCCCE----------EEEEE--CCCEEEEEeCCCeEEEEECC
Confidence 89999999999999997654322100000 000001 11111 23789999999999999875
Q ss_pred cC
Q 019672 316 IN 317 (337)
Q Consensus 316 ~~ 317 (337)
..
T Consensus 391 ~~ 392 (445)
T 2ovr_B 391 TG 392 (445)
T ss_dssp TC
T ss_pred CC
Confidence 43
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.97 E-value=6.3e-29 Score=224.53 Aligned_cols=233 Identities=12% Similarity=0.151 Sum_probs=178.4
Q ss_pred CCCCCeEEEEEcCC----CCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEcc-CCCEEEEEeCCCCCCCCCce
Q 019672 5 SSSYPVFFVSFNQD----NSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLY-SSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 5 ~~~~~v~~~~fs~d----g~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~ 76 (337)
.+...|++++|+|+ |++|++|+.++ +++||+.+++.+..... ..+..+.+.+ +.+.++..+ .|++
T Consensus 67 ~~~~~v~~~~~~~~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~-------~dg~ 139 (366)
T 3k26_A 67 DADENFYTCAWTYDSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVS-------KDHA 139 (366)
T ss_dssp CTTCCEEEEEEEECTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEE-------TTSC
T ss_pred CCCCcEEEEEeccCCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEe-------CCCe
Confidence 36688999999999 66899998887 69999999988776654 4456666666 556665554 4899
Q ss_pred EEEEECCCCCEEEEE----EcCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecC------------------
Q 019672 77 LCLFNTTTGTALREL----NFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDT------------------ 131 (337)
Q Consensus 77 v~iwd~~~~~~~~~~----~~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~------------------ 131 (337)
|++||+++++.+..+ .+...|.++.|+++. ++++. |+.|++||+++++....+..
T Consensus 140 i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 140 LRLWNIQTDTLVAIFGGVEGHRDEVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEEETTTTEEEEEECSTTSCSSCEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEEEeecCeEEEEecccccccCceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 999999999988887 356689999998764 44454 88999999988765443321
Q ss_pred --------CCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc--------------c-----ccCceEEEEeCC
Q 019672 132 --------VPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--------------H-----CEAPLAAIVLSS 184 (337)
Q Consensus 132 --------~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~--------------~-----~~~~i~~~~~s~ 184 (337)
..+...+.+++++ +.++++++ .||.|++||+.+... . +..+|++++|+|
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~--~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 295 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--GDLILSKS--CENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSM 295 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--TTEEEEEC--SSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEE
T ss_pred ccCccccccCCcceEEEEEEc--CCEEEEEe--cCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcC
Confidence 0022334555555 44888887 599999999987643 1 226799999999
Q ss_pred C--CCEEEEEeCCCcEEEEEEcCCCcee----EeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 185 N--GMYIATASEQGTIIRVFLVSEATKS----YSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 185 d--g~~lat~s~dg~~i~vwd~~~~~~~----~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
+ |++|++|+.||. |++||+.+++.+ ..+..+.+...|.+++|+|+++ +|++++.||.|+|||+.
T Consensus 296 ~~~~~~l~~~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~---~l~s~~~dg~i~iwd~~ 365 (366)
T 3k26_A 296 DFWQKMLALGNQVGK-LYVWDLEVEDPHKAKCTTLTHHKCGAAIRQTSFSRDSS---ILIAVCDDASIWRWDRL 365 (366)
T ss_dssp CTTSSEEEEECTTSC-EEEEECCSSSGGGCEEEEECCTTCCSCEEEEEECTTSS---EEEEEETTSEEEEEEC-
T ss_pred CCCCcEEEEEecCCc-EEEEECCCCCCccccceEEcccccCCceEEEEeCCCCC---eEEEEeCCCEEEEEEec
Confidence 9 999999999998 699999988643 3554332356799999999999 99999999999999985
No 80
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.97 E-value=2.6e-27 Score=221.99 Aligned_cols=232 Identities=11% Similarity=0.153 Sum_probs=182.6
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCC-EEEEEeCCCCCCCCCceEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSS-LLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~-~~~~~~~g~~~~~~d~~v~i 79 (337)
.+|..+|++++|+|++ +|++|+.++ +++||+.+++.+..... ..+..+.+.+.++ ..+++++ .|++|++
T Consensus 159 ~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s------~d~~i~v 231 (464)
T 3v7d_B 159 SGHDGGVWALKYAHGG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGS------RDNTLHV 231 (464)
T ss_dssp CCCSSCEEEEEECSTT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEE------TTSCEEE
T ss_pred eCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEc------CCCcEEE
Confidence 4688999999999998 778887776 69999999988766643 4566666665333 2333333 5999999
Q ss_pred EECCCCCEE-----------------------EEEE-cCCceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCC
Q 019672 80 FNTTTGTAL-----------------------RELN-FLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPN 134 (337)
Q Consensus 80 wd~~~~~~~-----------------------~~~~-~~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~ 134 (337)
||+.+++.. ..+. +...|.++..+++.++++. |+.|++||+++++.+..+..+.
T Consensus 232 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~- 310 (464)
T 3v7d_B 232 WKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCLYILSGHT- 310 (464)
T ss_dssp EECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEEEEETTEEEEEETTSCEEEEETTTTEEEEEECCCS-
T ss_pred eeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCC-
Confidence 999877633 2222 3447888888888888887 8999999999999988886554
Q ss_pred CceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCce
Q 019672 135 LKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK 209 (337)
Q Consensus 135 ~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~ 209 (337)
..+.++.++|++.++++++ .||.|++||+.+++.. |..+|.+++|+ +++|++|+.||+ |++||+.+++.
T Consensus 311 -~~v~~~~~~~~~~~l~sg~--~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~-v~vwd~~~~~~ 384 (464)
T 3v7d_B 311 -DRIYSTIYDHERKRCISAS--MDTTIRIWDLENGELMYTLQGHTALVGLLRLS--DKFLVSAAADGS-IRGWDANDYSR 384 (464)
T ss_dssp -SCEEEEEEETTTTEEEEEE--TTSCEEEEETTTTEEEEEECCCSSCEEEEEEC--SSEEEEEETTSE-EEEEETTTCCE
T ss_pred -CCEEEEEEcCCCCEEEEEe--CCCcEEEEECCCCcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCc-EEEEECCCCce
Confidence 4577777788888999888 5999999999988754 34889999998 579999999998 69999999887
Q ss_pred eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 210 SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 210 ~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
...+. +...+..++|+|+++ +|++|+ ||.|+|||+++++.
T Consensus 385 ~~~~~---~~~~~~~~~~~~~~~---~l~~~~-dg~i~iwd~~~g~~ 424 (464)
T 3v7d_B 385 KFSYH---HTNLSAITTFYVSDN---ILVSGS-ENQFNIYNLRSGKL 424 (464)
T ss_dssp EEEEE---CTTCCCEEEEEECSS---EEEEEE-TTEEEEEETTTCCE
T ss_pred eeeec---CCCCccEEEEEeCCC---EEEEec-CCeEEEEECCCCcE
Confidence 76653 233567789999999 999998 89999999987654
No 81
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.4e-27 Score=241.33 Aligned_cols=233 Identities=11% Similarity=0.142 Sum_probs=174.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
++...|++++|+|++++||+|+.++ ++||+..+.+...... ...+..+.+.+ ...++.++ .|++|++||+
T Consensus 15 gh~~~V~~lafspdg~~lAsgs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp-g~~L~S~s-------~D~~v~lWd~ 86 (902)
T 2oaj_A 15 GMSSKPIAAAFDFTQNLLAIATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK-GIYLVVIN-------AKDTVYVLSL 86 (902)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSEEEEECSTTCEEEEECSSCCCEEEEEEET-TTEEEEEE-------TTCEEEEEET
T ss_pred CCCCCcEEEEECCCCCEEEEEeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC-CCEEEEEE-------CcCeEEEEEC
Confidence 5778999999999999999999887 6999998877665543 24566677766 55455444 4999999999
Q ss_pred CCCCEEEEEEcCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeee-ee--------cCCCCCceEEEEeeCCC-ccE
Q 019672 83 TTGTALRELNFLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILD-TI--------DTVPNLKGLCAFSPSLN-ACF 149 (337)
Q Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~-~~--------~~~~~~~~~~~~~~~~~-~~~ 149 (337)
++++++..+.++..|.+++|+++. ++++. |+.|++||+++++... .+ ....+...+.+++++|+ ...
T Consensus 87 ~~~~~~~~~~~~~~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~~h~~~V~sl~~sp~~~~~ 166 (902)
T 2oaj_A 87 YSQKVLTTVFVPGKITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPAARLSPIVSIQWNPRDIGT 166 (902)
T ss_dssp TTCSEEEEEECSSCEEEEECCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSSSCCCCCCEEEEETTEEEE
T ss_pred CCCcEEEEEcCCCCEEEEEECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccccCCCCeEEEEEccCCCCE
Confidence 999999999888899999998764 44444 8999999999886531 11 11123345667777775 356
Q ss_pred EEEcCCCCccEEEEEEccCCcccc-----------------------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCC
Q 019672 150 LAVPASTTKGSVLVYNVMELHSHC-----------------------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE 206 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~~-----------------------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~ 206 (337)
+++++ .||.| +||+++.+... ...|++++|+|||++||+|+.||+ |++||+++
T Consensus 167 l~~g~--~dg~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~-i~lWd~~~ 242 (902)
T 2oaj_A 167 VLISY--EYVTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNS-LVFWDANS 242 (902)
T ss_dssp EEEEC--SSCEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCC-EEEEETTT
T ss_pred EEEEe--CCCcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCe-EEEEECCC
Confidence 77766 59999 99998765431 256999999999999999999998 69999999
Q ss_pred CceeEe--ecc--CC------------cceeEEEEEee----cCCCcccEEEEEeCC-----CcEEEEec
Q 019672 207 ATKSYS--FRR--GT------------YPSTIFSLSFG----QSMQFQDILVATSSS-----GSLHVFSP 251 (337)
Q Consensus 207 ~~~~~~--~~~--~~------------~~~~i~~l~fs----~dg~~~~~las~s~d-----g~v~iw~l 251 (337)
++.+.. +.. .+ +...|++++|+ ||+. .+|++|+.| .++++|++
T Consensus 243 g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~--~ll~sg~~~~~~~~~~v~~~~~ 310 (902)
T 2oaj_A 243 GHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYT--SLLISHKSISRGDNQSLTMIDL 310 (902)
T ss_dssp CCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEE--EEEEEEECSTTSSCCCEEEEEE
T ss_pred CcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCC--EEEEeCCCCCCCCCceEEEEec
Confidence 987653 210 11 23469999996 4442 178888776 37888885
No 82
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=2e-27 Score=240.23 Aligned_cols=293 Identities=11% Similarity=0.044 Sum_probs=188.1
Q ss_pred CCCCCCeEEEEEcCCC-CEEEEEcCCceEEEeCCCCcEEEEEee--------------------CCEEEEEEccCCCEEE
Q 019672 4 QSSSYPVFFVSFNQDN-SGFALSTKDGFKIFDSSTGRLCYERAV--------------------GAFSIVEMLYSSSLLA 62 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg-~~la~g~~~g~~vw~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~~~~ 62 (337)
..+..+|++++|+|++ ..|++|+.++..+||+.+++.+..... ..+..+.+.+++..++
T Consensus 148 ~~h~~~V~sl~~sp~~~~~l~~g~~dg~vlWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~la 227 (902)
T 2oaj_A 148 AARLSPIVSIQWNPRDIGTVLISYEYVTLTYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHII 227 (902)
T ss_dssp SSCCCCCCEEEEETTEEEEEEEECSSCEEEEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEE
T ss_pred ccCCCCeEEEEEccCCCCEEEEEeCCCcEEEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEE
Confidence 4577899999999964 678888888744999999887665532 2356666666666666
Q ss_pred EEeCCCCCCCCCceEEEEECCCCCEEEEEEc-------------------CCceeEEEEc----CC--eEEEEE--C---
Q 019672 63 IVGAGEQPSLSPRRLCLFNTTTGTALRELNF-------------------LTSILAVRLN----KK--RLVIVL--R--- 112 (337)
Q Consensus 63 ~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~-------------------~~~v~~i~~~----~~--~~~v~~--d--- 112 (337)
.++ .|++|++||+++++++..... ...|.+++|+ ++ .++++. +
T Consensus 228 sgs-------~Dg~i~lWd~~~g~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~V~~v~w~~~~~pd~~~ll~sg~~~~~~ 300 (902)
T 2oaj_A 228 TIH-------EDNSLVFWDANSGHMIMARTVFETEINVPQPDYIRDSSTNAAKISKVYWMCENNPEYTSLLISHKSISRG 300 (902)
T ss_dssp EEE-------TTCCEEEEETTTCCEEEEECSSCSCTTSCCTTCCCCCSSCCCEEEEEEEEECSSTTEEEEEEEEECSTTS
T ss_pred EEE-------CCCeEEEEECCCCcEEEEEeecccccCCCCCcCCCCCccccCCeeEEEEEecCCCCCCEEEEeCCCCCCC
Confidence 554 499999999999987754211 2257788773 33 222222 1
Q ss_pred --CeEEEEE-----------------------------------------------------------------------
Q 019672 113 --EKTYIYD----------------------------------------------------------------------- 119 (337)
Q Consensus 113 --~~i~i~d----------------------------------------------------------------------- 119 (337)
..+.+|+
T Consensus 301 ~~~~v~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~sp~~~g~~d~~~l~~~s~dg~l~~~~ 380 (902)
T 2oaj_A 301 DNQSLTMIDLGYTPRYSITSYEGMKNYYANPKQMKIFPLPTNVPIVNILPIPRQSPYFAGCHNPGLILLILGNGEIETML 380 (902)
T ss_dssp SCCCEEEEEEEECCCGGGCCHHHHHHHHHSCSEEEEECCSSSSCEEEEEECCSSCSHHHHTBSCSEEEEEETTSCEEEEE
T ss_pred CCceEEEEecCCCCCccccchhhhhhhhcCccceEEEecCCCCceEEEEECCCCCCCcCCCCCceeEEEEcCCCcEEEEE
Confidence 1455554
Q ss_pred CCCCeeeee-------ecCCCCCce--------------------------------EEEEeeCCCccEEEEcCCCCccE
Q 019672 120 ANTLAILDT-------IDTVPNLKG--------------------------------LCAFSPSLNACFLAVPASTTKGS 160 (337)
Q Consensus 120 ~~~~~~~~~-------~~~~~~~~~--------------------------------~~~~~~~~~~~~la~~~~~~dg~ 160 (337)
+.++..... +..+..... +..++++|++.++++++ .||+
T Consensus 381 ~~~g~~~~~~~~~~~~l~~~~~~v~~~~~s~~~~~~w~~~~~~~~~~~~~l~G~~~~v~sv~~spdg~~laSgs--~Dgt 458 (902)
T 2oaj_A 381 YPSGIFTDKASLFPQNLSWLRPLATTSMAASVPNKLWLGALSAAQNKDYLLKGGVRTKRQKLPAEYGTAFITGH--SNGS 458 (902)
T ss_dssp TTTCCEECCGGGSCGGGTTBTTBEEEEEEEEEEHHHHHHHHHTTBCCCCSCCCSBCCCCCCCCCSEEEEEEEEE--TTSE
T ss_pred CCCCCcccccccCCCcccccCCCeeEEEEEEcCHHHHHHHHhcccCCCCcccCCcCCCCcccccccCcEEEEec--CCCc
Confidence 332211110 000000000 11123357788999988 5999
Q ss_pred EEEEEccCCcc----------------cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc----------------
Q 019672 161 VLVYNVMELHS----------------HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT---------------- 208 (337)
Q Consensus 161 v~i~d~~~~~~----------------~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~---------------- 208 (337)
|++||+.++.. .|...|++|+|+|||++||+|+.||+ |+|||+.+++
T Consensus 459 VrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~Dgt-V~lwd~~~~~~~~~~~~~~~~~~~~~ 537 (902)
T 2oaj_A 459 VRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGD-VVLFKYEVNQFYSVENRPESGDLEMN 537 (902)
T ss_dssp EEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSC-EEEEEEEECCC---------------
T ss_pred EEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcE-EEEEEecCccccCccccCCCccccee
Confidence 99999987642 23468999999999999999999998 6999998763
Q ss_pred -----------------------------eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCC
Q 019672 209 -----------------------------KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRR 259 (337)
Q Consensus 209 -----------------------------~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~ 259 (337)
++..+. + |...|++|+||||| +||+|+.|++|+|||++.+.....
T Consensus 538 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-~-h~~~V~svafSpdG----~lAsgs~D~tv~lwd~~~~~~~~~ 611 (902)
T 2oaj_A 538 FRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-A-NKGKTSAINNSNIG----FVGIAYAAGSLMLIDRRGPAIIYM 611 (902)
T ss_dssp CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-C-CSCSEEEEEECBTS----EEEEEETTSEEEEEETTTTEEEEE
T ss_pred eeeccccCCccccccccccCCCCCCCccceeEEEE-c-CCCcEEEEEecCCc----EEEEEeCCCcEEEEECCCCeEEEE
Confidence 234443 2 46789999999999 699999999999999865432110
Q ss_pred CCccccccccccc-ccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecCCCC
Q 019672 260 GGRTSSILGSILP-ESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSINNCC 320 (337)
Q Consensus 260 ~~~~~~~~~~~~~-~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~~~~ 320 (337)
.. + ..+. .....+++.++. +...-+.++++..|++++.||++++|++.+...+
T Consensus 612 ----~~-~-~~~~~gh~~~V~sv~Fs--~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g 665 (902)
T 2oaj_A 612 ----EN-I-REISGAQSACVTCIEFV--IMEYGDDGYSSILMVCGTDMGEVITYKILPASGG 665 (902)
T ss_dssp ----EE-G-GGTCSSCCCCEEEEEEE--EEECTTSSSEEEEEEEEETTSEEEEEEEEECGGG
T ss_pred ----ee-h-hHhccccccceEEEEEE--EEecCCCCCcceEEEEEecCCcEEEEEEecCCCC
Confidence 00 0 0010 111123333221 0000012233589999999999999999776433
No 83
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.97 E-value=2.3e-28 Score=223.94 Aligned_cols=237 Identities=14% Similarity=0.132 Sum_probs=185.7
Q ss_pred CCCCCeEEEEEcCC----C---CEEEEEcCCc-eEEEeCCCCcE-----EEEEee-------CCEEEEEEc----cCCCE
Q 019672 5 SSSYPVFFVSFNQD----N---SGFALSTKDG-FKIFDSSTGRL-----CYERAV-------GAFSIVEML----YSSSL 60 (337)
Q Consensus 5 ~~~~~v~~~~fs~d----g---~~la~g~~~g-~~vw~~~~~~~-----~~~~~~-------~~~~~~~~~----~~~~~ 60 (337)
.+..+|++++|+|+ | ++|++|+.++ +++|++.+++. +..... ..+..+.+. ++.+.
T Consensus 60 ~h~~~v~~~~~~~~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~ 139 (397)
T 1sq9_A 60 VHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRLLSH 139 (397)
T ss_dssp CCTTCEEEEEEEEEEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC----CE
T ss_pred cCCCcEEEEEEecccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCCCce
Confidence 57889999999999 9 9999988776 69999988764 444432 456666776 66676
Q ss_pred -EEEEeCCCCCCCCCceEEEEECCC------CCEEE-----EEE--------cCCceeEEEEcCCeEEEEE--CCeEEEE
Q 019672 61 -LAIVGAGEQPSLSPRRLCLFNTTT------GTALR-----ELN--------FLTSILAVRLNKKRLVIVL--REKTYIY 118 (337)
Q Consensus 61 -~~~~~~g~~~~~~d~~v~iwd~~~------~~~~~-----~~~--------~~~~v~~i~~~~~~~~v~~--d~~i~i~ 118 (337)
++.++ .|+.|++||+++ ++.+. .+. +...|.++.++++..+++. ++.|++|
T Consensus 140 ~l~~~~-------~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~dg~i~i~ 212 (397)
T 1sq9_A 140 RLVATD-------VKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQIS 212 (397)
T ss_dssp EEEEEE-------TTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEE
T ss_pred EEEEEe-------CCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCceEEEEeCCCcEEEE
Confidence 55444 489999999988 66555 554 3568999999987633322 7899999
Q ss_pred ECCCCeeeeeecC---C-CCCceEEEEeeCCCccEEEEcCCCCc---cEEEEEEccCCccc------------------c
Q 019672 119 DANTLAILDTIDT---V-PNLKGLCAFSPSLNACFLAVPASTTK---GSVLVYNVMELHSH------------------C 173 (337)
Q Consensus 119 d~~~~~~~~~~~~---~-~~~~~~~~~~~~~~~~~la~~~~~~d---g~v~i~d~~~~~~~------------------~ 173 (337)
|+++++.+..+.. + .+...+.+++++|++.++++++ .| |.|++||+.+++.. +
T Consensus 213 d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~--~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (397)
T 1sq9_A 213 ELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAH--DSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAH 290 (397)
T ss_dssp ETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEE--EETTEEEEEEEETTTCCEEEEECBC--------CCBSB
T ss_pred ECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEe--cCCCCceEEEEECCCCcccceeccCccccccccccccc
Confidence 9999988888875 3 0034577788888888999887 48 99999999876532 4
Q ss_pred cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC----Cc---------------ceeEEEEEeecCC---
Q 019672 174 EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG----TY---------------PSTIFSLSFGQSM--- 231 (337)
Q Consensus 174 ~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~----~~---------------~~~i~~l~fs~dg--- 231 (337)
..+|.+++|+|+|++|++++.||. |+|||+.+++.+..+... .+ ...|++++|+|++
T Consensus 291 ~~~v~~~~~~~~~~~l~~~~~dg~-i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~ 369 (397)
T 1sq9_A 291 SSWVMSLSFNDSGETLCSAGWDGK-LRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRS 369 (397)
T ss_dssp SSCEEEEEECSSSSEEEEEETTSE-EEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSB
T ss_pred CCcEEEEEECCCCCEEEEEeCCCe-EEEEEcCCCceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccc
Confidence 578999999999999999999997 699999999998888610 12 5679999999998
Q ss_pred -------CcccEEEEEeCCCcEEEEecCCC
Q 019672 232 -------QFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 232 -------~~~~~las~s~dg~v~iw~l~~~ 254 (337)
+ +|++++.||.|+||+++++
T Consensus 370 ~~~~~~~~---~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 370 GMGADLNE---SLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp STTCTTSC---EEEEEETTTEEEEEEEEC-
T ss_pred cccccccc---eEEEecCCCcEEEEEcCCC
Confidence 7 9999999999999998754
No 84
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.97 E-value=2.6e-27 Score=210.17 Aligned_cols=236 Identities=9% Similarity=0.082 Sum_probs=177.9
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
..+...|++++|+|+|++|++|+.++ +++||+++++.+.....+...+..+.+.+..++..+ .++.+++|+.
T Consensus 64 ~~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~-------~~~~~~~~~~ 136 (318)
T 4ggc_A 64 EQPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGS-------RSGHIHHHDV 136 (318)
T ss_dssp CSTTCCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEE-------TTSEEEEEET
T ss_pred cCCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEe-------cCCceEeeec
Confidence 45778899999999999999999887 599999999988887777666677777777766554 4899999998
Q ss_pred CCCCE-EEEEE-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeee--cCCCCCceEEEEeeCCCcc-EE-EEc
Q 019672 83 TTGTA-LRELN-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTI--DTVPNLKGLCAFSPSLNAC-FL-AVP 153 (337)
Q Consensus 83 ~~~~~-~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-~l-a~~ 153 (337)
..+.. +..+. +...+..+.+.++. ++.+. |+.|++||+++++..... ........+.++...+++. .+ ...
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 216 (318)
T 4ggc_A 137 RVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGG 216 (318)
T ss_dssp TSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEE
T ss_pred CCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEe
Confidence 87644 34444 44578888886653 44444 889999999876532211 1111222344444444332 22 223
Q ss_pred CCCCccEEEEEEccCCcccc----cCceEEEEeCCCCCEEEEEe--CCCcEEEEEEcCCCceeEeeccCCcceeEEEEEe
Q 019672 154 ASTTKGSVLVYNVMELHSHC----EAPLAAIVLSSNGMYIATAS--EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSF 227 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~lat~s--~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~f 227 (337)
+. .++.|++||........ ...+..++|+|+++.+++++ .||+ |+|||+++++++.++. + |...|++|+|
T Consensus 217 ~~-~~~~i~lwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~sg~~d~~-i~iwd~~~~~~~~~l~-g-H~~~V~~l~~ 292 (318)
T 4ggc_A 217 GT-SDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGHGFAQNQ-LVIWKYPTMAKVAELK-G-HTSRVLSLTM 292 (318)
T ss_dssp CT-TTCEEEEEETTTCCEEEEEECSSCEEEEEEETTTTEEEEEECTTTCC-EEEEETTTCCEEEEEC-C-CSSCEEEEEE
T ss_pred cC-CCCEEEEEecccccccccccceeeeeeeeecccccceEEEEEcCCCE-EEEEECCCCcEEEEEc-C-CCCCEEEEEE
Confidence 33 68999999998776543 38899999999999888765 7888 6999999999999985 3 4678999999
Q ss_pred ecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 228 GQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 228 s~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
+|||+ +||+||.||+|+|||+..
T Consensus 293 spdg~---~l~S~s~D~~v~iWd~~~ 315 (318)
T 4ggc_A 293 SPDGA---TVASAAADETLRLWRCFE 315 (318)
T ss_dssp CTTSS---CEEEEETTTEEEEECCSC
T ss_pred cCCCC---EEEEEecCCeEEEEECCC
Confidence 99999 999999999999999864
No 85
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.97 E-value=3.5e-28 Score=219.50 Aligned_cols=257 Identities=14% Similarity=0.111 Sum_probs=180.3
Q ss_pred EcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC---------C
Q 019672 15 FNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT---------T 84 (337)
Q Consensus 15 fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~---------~ 84 (337)
+.+|+.+|++|+.|+ +++||+.+++.+.......+. .+.+.+. + ++++ .|++|++|+.. +
T Consensus 44 ~~~d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~~~~v~--~~~~~~~-~--~s~s-----~D~~i~~w~~~~~~~~~~~~~ 113 (343)
T 3lrv_A 44 MYYDKWVCMCRCEDGALHFTQLKDSKTITTITTPNPR--TGGEHPA-I--ISRG-----PCNRLLLLYPGNQITILDSKT 113 (343)
T ss_dssp SSEEEEEEEEEEETTEEEEEEESSSSCEEEEEEECCC--TTCCCCS-E--EEEC-----STTEEEEEETTTEEEEEETTT
T ss_pred hcCCCCEEEEECCCCcEEEEECCCCcEEEEEecCCce--eeeeCCc-e--EEec-----CCCeEEEEEccCceEEeecCC
Confidence 446788899999887 599999999877665532222 2233444 2 3332 58999999654 6
Q ss_pred CCEEEEEEcC--CceeEEEEcC--Ce--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCC
Q 019672 85 GTALRELNFL--TSILAVRLNK--KR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (337)
Q Consensus 85 ~~~~~~~~~~--~~v~~i~~~~--~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 157 (337)
++.+..+... .+|.++.+++ +. ++.+. |+.|++||+++++.+.....+ ....+.+++++|++.++++++ .
T Consensus 114 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~-~~~~i~~~~~~pdg~~lasg~--~ 190 (343)
T 3lrv_A 114 NKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK-SDVEYSSGVLHKDSLLLALYS--P 190 (343)
T ss_dssp CCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC-SSCCCCEEEECTTSCEEEEEC--T
T ss_pred cceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC-CCCceEEEEECCCCCEEEEEc--C
Confidence 6656555533 5799999988 43 44344 899999999998876555332 223466778888999999988 5
Q ss_pred ccEEEEEEccCCccc-------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCC-cceeE--EEEEe
Q 019672 158 KGSVLVYNVMELHSH-------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT-YPSTI--FSLSF 227 (337)
Q Consensus 158 dg~v~i~d~~~~~~~-------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~-~~~~i--~~l~f 227 (337)
||.|++||+++++.. |..+|++++|+|+|.+|++++++ + |++||+++++.+..+.... +...+ .+++|
T Consensus 191 dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~-~-v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 268 (343)
T 3lrv_A 191 DGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQ-T-VVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDI 268 (343)
T ss_dssp TSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESS-B-EEEEETTSSTTCBSSCCCBC-----CCEEEEE
T ss_pred CCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCC-e-EEEEEcCCCCcceeecccccccccccceEEEE
Confidence 999999999987654 55899999999999999999954 6 6999999988765543210 11223 36999
Q ss_pred ecCCCcccEEEEEeC-CCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCc---ccCEEEEE
Q 019672 228 GQSMQFQDILVATSS-SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGV---KRASVSVI 303 (337)
Q Consensus 228 s~dg~~~~~las~s~-dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~---~~~~l~~~ 303 (337)
+|+|+ +|++++. |+.|+||++++.... |.. .....+.+.+ +...++++
T Consensus 269 ~~~g~---~l~~~s~~d~~i~v~~~~~~~~~---------------------~~~----~~~~~~~~~~~~~~~~~l~~~ 320 (343)
T 3lrv_A 269 DDSGK---NMIAYSNESNSLTIYKFDKKTKN---------------------WTK----DEESALCLQSDTADFTDMDVV 320 (343)
T ss_dssp CTTSS---EEEEEETTTTEEEEEEECTTTCS---------------------EEE----EEEEECCC----CCCCEEEEE
T ss_pred CCCCC---EEEEecCCCCcEEEEEEcccccc---------------------eEe----cCceeEecCccccccceeEEE
Confidence 99999 9999998 999999999754321 111 0001111222 45789999
Q ss_pred EeCCcEEEEEE
Q 019672 304 TYNGYFVEYIF 314 (337)
Q Consensus 304 ~~dg~~~~~~~ 314 (337)
+.||.+.++-.
T Consensus 321 ~~d~~~~~~~~ 331 (343)
T 3lrv_A 321 CGDGGIAAILK 331 (343)
T ss_dssp EETTEEEEEEE
T ss_pred ecCCceEEEEe
Confidence 99999988843
No 86
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.3e-27 Score=223.77 Aligned_cols=230 Identities=10% Similarity=0.070 Sum_probs=179.9
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCc---EEEEEeeC------------------------------------
Q 019672 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGR---LCYERAVG------------------------------------ 47 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~---~~~~~~~~------------------------------------ 47 (337)
..|+.+++|+|||++|+++..+.+++||+.+++ .+.....+
T Consensus 4 ~~p~~~v~~s~dg~~l~~~~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (450)
T 2vdu_B 4 IHPLQNLLTSRDGSLVFAIIKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNKGDS 83 (450)
T ss_dssp ECCCCEEEECSSSSEEEEEETTEEEEEEEETTTEEEEEEEEECCC-----------------------------------
T ss_pred cccEEEEEecCCCCEEEEEeCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCcCcc
Confidence 368999999999999888888889999999988 54433211
Q ss_pred --------------------CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC--CCCEEEEE---EcCCceeEEEE
Q 019672 48 --------------------AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTALREL---NFLTSILAVRL 102 (337)
Q Consensus 48 --------------------~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~--~~~~~~~~---~~~~~v~~i~~ 102 (337)
.+..+++.++...++++++ .|++|++||+. +++.+..+ .+...|.+++|
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~------~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~ 157 (450)
T 2vdu_B 84 IKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACAD------SDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISI 157 (450)
T ss_dssp ----------------CCCCCEEEEEECTTSSEEEEEEG------GGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEE
T ss_pred ccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEEC------CCCeEEEEECcCCCCceeeeeecccCCCCceEEEE
Confidence 3555666667777655554 48999999999 88887776 45578999999
Q ss_pred cCCe--EEEEE-CCeEEEEECCCCeeee----eecCCCCCceEEEEeeCCC---ccEEEEcCCCCccEEEEEEccCCccc
Q 019672 103 NKKR--LVIVL-REKTYIYDANTLAILD----TIDTVPNLKGLCAFSPSLN---ACFLAVPASTTKGSVLVYNVMELHSH 172 (337)
Q Consensus 103 ~~~~--~~v~~-d~~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~~---~~~la~~~~~~dg~v~i~d~~~~~~~ 172 (337)
+++. ++++. ++.+++|++.+++... .+..+. ..+.+++++|+ +.++++++ .|+.|++||+.+++..
T Consensus 158 sp~~~~l~~~~~~g~v~~~~~~~~~~~~~~~~~~~~h~--~~v~~~~~sp~~~~~~~l~s~~--~d~~i~vwd~~~~~~~ 233 (450)
T 2vdu_B 158 AEDDTTVIIADKFGDVYSIDINSIPEEKFTQEPILGHV--SMLTDVHLIKDSDGHQFIITSD--RDEHIKISHYPQCFIV 233 (450)
T ss_dssp CTTSSEEEEEETTSEEEEEETTSCCCSSCCCCCSEECS--SCEEEEEEEECTTSCEEEEEEE--TTSCEEEEEESCTTCE
T ss_pred cCCCCEEEEEeCCCcEEEEecCCcccccccceeeeccc--CceEEEEEcCCCCCCcEEEEEc--CCCcEEEEECCCCcee
Confidence 8764 44444 7899999998876543 443333 35667777777 88888887 5899999999877543
Q ss_pred ------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-----------------------CcceeEE
Q 019672 173 ------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-----------------------TYPSTIF 223 (337)
Q Consensus 173 ------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-----------------------~~~~~i~ 223 (337)
|..+|.+++|+ +|++|++++.||+ |+|||+.+++.+..+..+ .....|.
T Consensus 234 ~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~-v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 311 (450)
T 2vdu_B 234 DKWLFGHKHFVSSICCG-KDYLLLSAGGDDK-IFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVS 311 (450)
T ss_dssp EEECCCCSSCEEEEEEC-STTEEEEEESSSE-EEEEETTTCCEEEEEECHHHHGGGCCTTSBC----------CBCCCEE
T ss_pred eeeecCCCCceEEEEEC-CCCEEEEEeCCCe-EEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccccceEEEE
Confidence 44889999999 9999999999997 699999999988777522 1123589
Q ss_pred EEEeecCCCcccEEEEEe-CCCcEEEEec
Q 019672 224 SLSFGQSMQFQDILVATS-SSGSLHVFSP 251 (337)
Q Consensus 224 ~l~fs~dg~~~~~las~s-~dg~v~iw~l 251 (337)
+++|+|+++ +|++++ .|+.|+||++
T Consensus 312 ~i~~~~~~~---~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 312 KIIKSKNLP---FVAFFVEATKCIIILEM 337 (450)
T ss_dssp EEEECSSSS---EEEEEETTCSEEEEEEE
T ss_pred EEEEeCCCC---EEEEEECCCCeEEEEEe
Confidence 999999999 899998 8999999999
No 87
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.97 E-value=6.9e-28 Score=232.84 Aligned_cols=234 Identities=12% Similarity=0.100 Sum_probs=184.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCceEEEeCCCC----cEEEEEee--CC-EEEEEEcc--CCCEEEEEeCCCCCCCCCc
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTG----RLCYERAV--GA-FSIVEMLY--SSSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~----~~~~~~~~--~~-~~~~~~~~--~~~~~~~~~~g~~~~~~d~ 75 (337)
.+.+.|++++|+|||++|++++++.++|||++++ +....... .. +..+++.+ +.+.++..+ .|+
T Consensus 16 ~~~~~v~~~~~spdg~~l~~~~~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~-------~dg 88 (615)
T 1pgu_A 16 TQRNFTTHLSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGD-------ESG 88 (615)
T ss_dssp CCTTCCCCCEEETTTTEEEEEETTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEE-------TTS
T ss_pred CccCceeEEEECCCCCEEEEecCCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEec-------CCC
Confidence 5678899999999999999999777899999988 66666544 34 66777777 667766654 489
Q ss_pred eEEEEECCCC--------CEEEEEE-cCCceeEEEEcCCe--EEEEE-C----CeEEEEECCCCeeeeeecCCCCCceEE
Q 019672 76 RLCLFNTTTG--------TALRELN-FLTSILAVRLNKKR--LVIVL-R----EKTYIYDANTLAILDTIDTVPNLKGLC 139 (337)
Q Consensus 76 ~v~iwd~~~~--------~~~~~~~-~~~~v~~i~~~~~~--~~v~~-d----~~i~i~d~~~~~~~~~~~~~~~~~~~~ 139 (337)
+|++||+.++ +.+..+. +..+|.++.|+++. ++++. + +.|++|| .++.+..+..+. ..+.
T Consensus 89 ~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~~~~~~~~~~~~--~~v~ 164 (615)
T 1pgu_A 89 KVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFEGRRLCVVGEGRDNFGVFISWD--SGNSLGEVSGHS--QRIN 164 (615)
T ss_dssp EEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTTSSEEEEEECCSSCSEEEEETT--TCCEEEECCSCS--SCEE
T ss_pred EEEEEeCCCCcccccccccccchhhcccccEEEEEEeCCCCEEEEeccCCCCccEEEEEE--CCCcceeeecCC--ccEE
Confidence 9999999755 4555555 45689999998864 44444 3 4788888 456666666544 4577
Q ss_pred EEeeCCCcc-EEEEcCCCCccEEEEEEccCCccc-----ccC---ceEEEEeCCC-CCEEEEEeCCCcEEEEEEcCCCce
Q 019672 140 AFSPSLNAC-FLAVPASTTKGSVLVYNVMELHSH-----CEA---PLAAIVLSSN-GMYIATASEQGTIIRVFLVSEATK 209 (337)
Q Consensus 140 ~~~~~~~~~-~la~~~~~~dg~v~i~d~~~~~~~-----~~~---~i~~~~~s~d-g~~lat~s~dg~~i~vwd~~~~~~ 209 (337)
++.++|++. ++++++ .||.|++||+.+.+.. |.. +|.+++|+|+ |++|++++.||. |++||+.+++.
T Consensus 165 ~~~~~~~~~~~l~~~~--~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~vwd~~~~~~ 241 (615)
T 1pgu_A 165 ACHLKQSRPMRSMTVG--DDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRK-ISCFDGKSGEF 241 (615)
T ss_dssp EEEECSSSSCEEEEEE--TTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCC-EEEEETTTCCE
T ss_pred EEEECCCCCcEEEEEe--CCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCe-EEEEECCCCCE
Confidence 778888876 677776 5999999999887654 335 8999999999 999999999998 69999999999
Q ss_pred eEeeccC--CcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 210 SYSFRRG--TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 210 ~~~~~~~--~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
+..+... .+...|.+++|+ +++ +|++++.|++|++||+.+.+.
T Consensus 242 ~~~~~~~~~~~~~~v~~~~~~-~~~---~l~~~~~d~~i~~wd~~~~~~ 286 (615)
T 1pgu_A 242 LKYIEDDQEPVQGGIFALSWL-DSQ---KFATVGADATIRVWDVTTSKC 286 (615)
T ss_dssp EEECCBTTBCCCSCEEEEEES-SSS---EEEEEETTSEEEEEETTTTEE
T ss_pred eEEecccccccCCceEEEEEc-CCC---EEEEEcCCCcEEEEECCCCcE
Confidence 8887331 245679999999 998 999999999999999986543
No 88
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.96 E-value=9.4e-28 Score=214.49 Aligned_cols=239 Identities=12% Similarity=0.108 Sum_probs=169.1
Q ss_pred eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE--EEEEE-cCCceeEEEEcC----CeEEEEE-CCeEE
Q 019672 45 AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA--LRELN-FLTSILAVRLNK----KRLVIVL-REKTY 116 (337)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~--~~~~~-~~~~v~~i~~~~----~~~~v~~-d~~i~ 116 (337)
+...+..+.+.++++.++..+ .|++|+|||+++++. +..+. |..+|.+++|++ +.++.+. |++|+
T Consensus 12 H~~~V~~v~~s~~g~~lasgs-------~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 12 HEDMIHDAQMDYYGTRLATCS-------SDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp --CCEEEEEECGGGCEEEEEE-------TTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred ccCeEEEeeEcCCCCEEEEEe-------CCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 345677777777778776655 499999999988753 44554 456899999963 4455555 89999
Q ss_pred EEECCCCe--eeeeecCCCCCceEEEEeeCCC--ccEEEEcCCCCccEEEEEEccCCcc--------cccCceEEEEeCC
Q 019672 117 IYDANTLA--ILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELHS--------HCEAPLAAIVLSS 184 (337)
Q Consensus 117 i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~la~~~~~~dg~v~i~d~~~~~~--------~~~~~i~~~~~s~ 184 (337)
+||+++++ .+..+..+... +.+++++|+ +.++++++ .||.|++||+..... .|...|.+++|+|
T Consensus 85 iWd~~~~~~~~~~~~~~h~~~--V~~v~~~p~~~g~~lasgs--~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~~~~ 160 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDSS--VNSVCWAPHDYGLILACGS--SDGAISLLTYTGEGQWEVKKINNAHTIGCNAVSWAP 160 (316)
T ss_dssp EECCSSSCCCEEEEECCCSSC--CCEEEECCTTTCSCEEEEC--SSSCEEEEEECSSSCEEECCBTTSSSSCBCCCEECC
T ss_pred EEECCCCcceEEEEccCCCCc--eEEEEECCCCCCcEEEEEc--CCCCEEEEecCCCCCcceeeeeccccCCcceEEEcc
Confidence 99998763 44555544443 444455554 77889888 599999999976521 2447899999999
Q ss_pred C-----------------CCEEEEEeCCCcEEEEEEcCCC---ceeEeeccCCcceeEEEEEeecCC----CcccEEEEE
Q 019672 185 N-----------------GMYIATASEQGTIIRVFLVSEA---TKSYSFRRGTYPSTIFSLSFGQSM----QFQDILVAT 240 (337)
Q Consensus 185 d-----------------g~~lat~s~dg~~i~vwd~~~~---~~~~~~~~~~~~~~i~~l~fs~dg----~~~~~las~ 240 (337)
+ +++||+|+.|++ |+|||++++ +.+..+. .|...|.+++|+|++ + +||++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~-v~lWd~~~~~~~~~~~~l~--~h~~~V~~v~~sp~~~~~~~---~las~ 234 (316)
T 3bg1_A 161 AVVPGSLIDHPSGQKPNYIKRFASGGCDNL-IKLWKEEEDGQWKEEQKLE--AHSDWVRDVAWAPSIGLPTS---TIASC 234 (316)
T ss_dssp CCCC------CCSCCCCCCCBEECCBTTSB-CCEEEECTTSCEEEEECCB--CCSSCEEEEECCCCSSCSCC---EEEEE
T ss_pred ccCCccccccccccCccccceEEEecCCCe-EEEEEeCCCCccceeeecc--cCCCceEEEEecCCCCCCCc---eEEEE
Confidence 8 479999999998 699999765 3445553 245679999999997 6 89999
Q ss_pred eCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 241 SSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 241 s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
+.|++|+||+++....... ....+......+| .+++.++++.|++++.||.+++|+...+
T Consensus 235 s~D~~v~iw~~~~~~~~~~-------~~~~~~~~~~~v~----------~v~~sp~g~~las~~~D~~v~lw~~~~~ 294 (316)
T 3bg1_A 235 SQDGRVFIWTCDDASSNTW-------SPKLLHKFNDVVW----------HVSWSITANILAVSGGDNKVTLWKESVD 294 (316)
T ss_dssp ETTCEEEEEECSSTTCCCC-------BCCEEEECSSCEE----------EEEECTTTCCEEEEESSSCEEEEEECTT
T ss_pred cCCCeEEEEEccCccccch-------hhhhhhcCCCcEE----------EEEEcCCCCEEEEEcCCCeEEEEEECCC
Confidence 9999999999876321110 0001111111122 3334666789999999999999998643
No 89
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.96 E-value=2.8e-29 Score=261.99 Aligned_cols=271 Identities=13% Similarity=0.129 Sum_probs=210.8
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
+..+|++++|+|+++++++|+.+| +++|++.+++....... ..+..+.+.++++.++..+ .|++|++||+
T Consensus 960 ~~~~i~~~~~sp~g~~l~~g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~s~~-------~dg~i~vwd~ 1032 (1249)
T 3sfz_A 960 PEAQVSCCCLSPHLEYVAFGDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTADGKTLISSS-------EDSVIQVWNW 1032 (1249)
T ss_dssp CCSCEEEEEECTTSSEEEEEETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSSSSCEEEEC-------SSSBEEEEET
T ss_pred ccCcEEEEEEcCCCCEEEEEcCCCCEEEEEcCCCceeeecccCCCceEEEEECCCCCEEEEEc-------CCCEEEEEEC
Confidence 356799999999999999999887 59999999887766543 3455566666667666554 4899999999
Q ss_pred CCCCEEEEEEcCCceeEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccE
Q 019672 83 TTGTALRELNFLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (337)
Q Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~ 160 (337)
.+++......+...|.++.++++..+++. |+.|++||+.+++.+..+..+.. .+.+++++|++.++++++ .||.
T Consensus 1033 ~~~~~~~~~~~~~~v~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~--~v~~~~~s~d~~~l~s~s--~d~~ 1108 (1249)
T 3sfz_A 1033 QTGDYVFLQAHQETVKDFRLLQDSRLLSWSFDGTVKVWNVITGRIERDFTCHQG--TVLSCAISSDATKFSSTS--ADKT 1108 (1249)
T ss_dssp TTTEEECCBCCSSCEEEEEECSSSEEEEEESSSEEEEEETTTTCCCEEEECCSS--CCCCEEECSSSSSCEEEC--CSSC
T ss_pred CCCceEEEecCCCcEEEEEEcCCCcEEEEECCCcEEEEECCCCceeEEEcccCC--cEEEEEECCCCCEEEEEc--CCCc
Confidence 99988766667779999999887665544 89999999999988888876544 455666677888999888 5999
Q ss_pred EEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeecc-------CCcceeEEEEEee
Q 019672 161 VLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR-------GTYPSTIFSLSFG 228 (337)
Q Consensus 161 v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~-------~~~~~~i~~l~fs 228 (337)
|++||+.++... |..+|++++|+|||++||+|+.||+ |++||+.+++.+..+.. ..+...|++++||
T Consensus 1109 v~iwd~~~~~~~~~l~~h~~~v~~~~~s~dg~~lat~~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~fs 1187 (1249)
T 3sfz_A 1109 AKIWSFDLLSPLHELKGHNGCVRCSAFSLDGILLATGDDNGE-IRIWNVSDGQLLHSCAPISVEEGTATHGGWVTDVCFS 1187 (1249)
T ss_dssp CCEECSSSSSCSBCCCCCSSCEEEEEECSSSSEEEEEETTSC-CCEEESSSSCCCCCCCCCC-------CCSCCCEEEEC
T ss_pred EEEEECCCcceeeeeccCCCcEEEEEECCCCCEEEEEeCCCE-EEEEECCCCceEEEeccccccccccccCceEEEEEEC
Confidence 999999887654 3488999999999999999999998 69999999987765410 1235569999999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCc
Q 019672 229 QSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGY 308 (337)
Q Consensus 229 ~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 308 (337)
|||+ +|++++ |+|++||+.++..... + ......++ .+.+.+++.+|++++.||.
T Consensus 1188 ~dg~---~l~s~~--g~v~vwd~~~g~~~~~----------~-~~~~~~i~----------~~~~s~dg~~l~~~~~dg~ 1241 (1249)
T 3sfz_A 1188 PDSK---TLVSAG--GYLKWWNVATGDSSQT----------F-YTNGTNLK----------KIHVSPDFRTYVTVDNLGI 1241 (1249)
T ss_dssp TTSS---CEEEES--SSEEEBCSSSCBCCCC----------C-CCSSCCCC----------CCEECSSSCCEEEECTTCC
T ss_pred CCCC---EEEECC--CeEEEEECCCCceeee----------e-eccCCccc----------EEEECCCCCEEEEecCCcE
Confidence 9999 898886 8999999987654321 0 00001111 2233566689999999999
Q ss_pred EEEEEE
Q 019672 309 FVEYIF 314 (337)
Q Consensus 309 ~~~~~~ 314 (337)
+++|++
T Consensus 1242 v~vw~l 1247 (1249)
T 3sfz_A 1242 LYILQV 1247 (1249)
T ss_dssp EEEECC
T ss_pred EEEEee
Confidence 999986
No 90
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=7.7e-27 Score=210.84 Aligned_cols=241 Identities=11% Similarity=0.123 Sum_probs=188.7
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
..+..+|++++|+|++++|++++.++ +++||+.+++.+.... ...+..+.+.++.+.++..+.. ....++.|++||
T Consensus 71 ~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~~--~~~~~g~i~~~d 148 (369)
T 3zwl_B 71 DGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQCVATWKSPVPVKRVEFSPCGNYFLAILDN--VMKNPGSINIYE 148 (369)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSSEEEEEECC--BTTBCCEEEEEE
T ss_pred hhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEeecCCCeEEEEEccCCCEEEEecCC--ccCCCCEEEEEE
Confidence 35788999999999999999998877 6999999998776654 3456667777777777666541 001138999999
Q ss_pred CCCCCE-----------EEEEE-cCC--ceeEEEEcCCe--EEEEE-CCeEEEEECCC-CeeeeeecCCCCCceEEEEee
Q 019672 82 TTTGTA-----------LRELN-FLT--SILAVRLNKKR--LVIVL-REKTYIYDANT-LAILDTIDTVPNLKGLCAFSP 143 (337)
Q Consensus 82 ~~~~~~-----------~~~~~-~~~--~v~~i~~~~~~--~~v~~-d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~ 143 (337)
+.++.. +..+. +.. .+.++.++++. ++++. ++.|++||+++ .+.+..+..+. ..+.++.+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~--~~v~~~~~ 226 (369)
T 3zwl_B 149 IERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHE--KSISDMQF 226 (369)
T ss_dssp EEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEEEEEEECCS--SCEEEEEE
T ss_pred ecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEeEEEEecCC--CceeEEEE
Confidence 876542 22222 222 78899998764 44444 88999999998 67777776543 35677788
Q ss_pred CCCccEEEEcCCCCccEEEEEEccCCcccc----cCceEEEEeCCCCCEEEEEeCCCc-------------EEEEEEcCC
Q 019672 144 SLNACFLAVPASTTKGSVLVYNVMELHSHC----EAPLAAIVLSSNGMYIATASEQGT-------------IIRVFLVSE 206 (337)
Q Consensus 144 ~~~~~~la~~~~~~dg~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~lat~s~dg~-------------~i~vwd~~~ 206 (337)
+|++.++++++ .||.|++||+.+++... ..++.+++|+|+++++++++.++. .+++||+.+
T Consensus 227 ~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~ 304 (369)
T 3zwl_B 227 SPDLTYFITSS--RDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIF 304 (369)
T ss_dssp CTTSSEEEEEE--TTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTT
T ss_pred CCCCCEEEEec--CCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCC
Confidence 88888999887 58999999999877553 388999999999999999999882 369999999
Q ss_pred CceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 207 ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 207 ~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
++.+..+.. +...|.+++|+|+++ +|++++.||+|+||+++...
T Consensus 305 ~~~~~~~~~--~~~~v~~~~~s~~~~---~l~s~~~dg~v~iw~~~~~~ 348 (369)
T 3zwl_B 305 EEEIGRVQG--HFGPLNTVAISPQGT---SYASGGEDGFIRLHHFEKSY 348 (369)
T ss_dssp CCEEEEEEC--CSSCEEEEEECTTSS---EEEEEETTSEEEEEEECHHH
T ss_pred Ccchhheec--ccCcEEEEEECCCCC---EEEEEcCCCeEEEEECcccc
Confidence 999888853 356799999999999 99999999999999997643
No 91
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=3.6e-27 Score=215.55 Aligned_cols=228 Identities=14% Similarity=0.114 Sum_probs=176.1
Q ss_pred CCCCCeEEEEEcC-CCCEEEEEcCCc-eEEEeCCCCcEEEEEee-----CCEEEEEEccCCCEEEEEeCCCCCCCCCceE
Q 019672 5 SSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRLCYERAV-----GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (337)
Q Consensus 5 ~~~~~v~~~~fs~-dg~~la~g~~~g-~~vw~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v 77 (337)
++..+|++++|+| ++++|++|+.++ +++||+.+.. +..... ..+..+.+.++.+.++..+ .|+.|
T Consensus 116 ~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~i 187 (383)
T 3ei3_B 116 GPGDAITGMKFNQFNTNQLFVSSIRGATTLRDFSGSV-IQVFAKTDSWDYWYCCVDVSVSRQMLATGD-------STGRL 187 (383)
T ss_dssp STTCBEEEEEEETTEEEEEEEEETTTEEEEEETTSCE-EEEEECCCCSSCCEEEEEEETTTTEEEEEE-------TTSEE
T ss_pred CcCCceeEEEeCCCCCCEEEEEeCCCEEEEEECCCCc-eEEEeccCCCCCCeEEEEECCCCCEEEEEC-------CCCCE
Confidence 5888999999999 778899998877 6999998643 333221 3367777877778776655 48999
Q ss_pred EEEECCCCCEEEEEE-cCCceeEEEEcCCe---EEEEE-CCeEEEEECCC----CeeeeeecCCCCCceEEEEeeCC-Cc
Q 019672 78 CLFNTTTGTALRELN-FLTSILAVRLNKKR---LVIVL-REKTYIYDANT----LAILDTIDTVPNLKGLCAFSPSL-NA 147 (337)
Q Consensus 78 ~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~---~~v~~-d~~i~i~d~~~----~~~~~~~~~~~~~~~~~~~~~~~-~~ 147 (337)
++||+ +++++..+. +...|.+++|+++. ++++. |+.|++||+++ +..+..+. +...+.+++++| ++
T Consensus 188 ~i~d~-~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~---~~~~v~~~~~s~~~~ 263 (383)
T 3ei3_B 188 LLLGL-DGHEIFKEKLHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMP---HEKPVNAAYFNPTDS 263 (383)
T ss_dssp EEEET-TSCEEEEEECSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEE---CSSCEEEEEECTTTS
T ss_pred EEEEC-CCCEEEEeccCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEec---CCCceEEEEEcCCCC
Confidence 99999 567777776 45689999998874 44444 88999999987 55555552 344677888888 88
Q ss_pred cEEEEcCCCCccEEEEEEccCCccccc----------------------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcC
Q 019672 148 CFLAVPASTTKGSVLVYNVMELHSHCE----------------------APLAAIVLSSNGMYIATASEQGTIIRVFLVS 205 (337)
Q Consensus 148 ~~la~~~~~~dg~v~i~d~~~~~~~~~----------------------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~ 205 (337)
.++++++ .||.|++||+.+++.... ..+..++|+|+|++ +|+.||+ |+|||+.
T Consensus 264 ~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~-i~iwd~~ 338 (383)
T 3ei3_B 264 TKLLTTD--QRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRT-IDIYDAN 338 (383)
T ss_dssp CEEEEEE--SSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCC-EEEEETT
T ss_pred CEEEEEc--CCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCccc--ccCCCCe-EEEEecC
Confidence 8999888 589999999987654211 34555777777776 7789998 6999999
Q ss_pred CCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 206 EATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 206 ~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
+++.+..+....+...+.+++|+|+++ +|++|+ ||+|+|||+++
T Consensus 339 ~~~~~~~l~~~~~~~~~~~~~~s~~g~---~l~s~s-d~~i~iw~~~~ 382 (383)
T 3ei3_B 339 SGGLVHQLRDPNAAGIISLNKFSPTGD---VLASGM-GFNILIWNRED 382 (383)
T ss_dssp TCCEEEEECBTTBCSCCCEEEECTTSS---EEEEEE-TTEEEEEECC-
T ss_pred CCceeeeecCCCCCceEEEEEEecCcc---EEEEec-CCcEEEEecCC
Confidence 999999886544456678889999999 999997 89999999864
No 92
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2.5e-27 Score=220.38 Aligned_cols=231 Identities=18% Similarity=0.202 Sum_probs=174.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCC---CCcEEEEEeeCC--------------EEEEEEcc--CCCEEEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSS---TGRLCYERAVGA--------------FSIVEMLY--SSSLLAIV 64 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~---~~~~~~~~~~~~--------------~~~~~~~~--~~~~~~~~ 64 (337)
.+..+|++++|+|++++|++|+.++ +++||++ +++.......+. +..+...+ +.+.++..
T Consensus 109 ~h~~~v~~~~~~~~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 188 (437)
T 3gre_A 109 DCSSTVTQITMIPNFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVAL 188 (437)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEE
T ss_pred cCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEE
Confidence 4678999999999999999999887 5999984 555443322121 22222222 23343333
Q ss_pred eCCCCCCCCCceEEEEECCCCCEEEEEEc---CCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecCCCCCceE
Q 019672 65 GAGEQPSLSPRRLCLFNTTTGTALRELNF---LTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDTVPNLKGL 138 (337)
Q Consensus 65 ~~g~~~~~~d~~v~iwd~~~~~~~~~~~~---~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~ 138 (337)
+ .|++|++||+++++++..+.. ...|.+++|+++. ++++. |+.|++||+++++.+..+... +...+
T Consensus 189 ~-------~d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~v 260 (437)
T 3gre_A 189 T-------NLSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSWSFG-DHAPI 260 (437)
T ss_dssp E-------TTSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEEBCT-TCEEE
T ss_pred e-------CCCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEEecC-CCCce
Confidence 3 599999999999999998874 4689999998765 44444 889999999999888877532 23356
Q ss_pred EEE----eeCCCccEEEEcCCCCccEEEEEEccCCccc-------------------------------ccCceEEEEeC
Q 019672 139 CAF----SPSLNACFLAVPASTTKGSVLVYNVMELHSH-------------------------------CEAPLAAIVLS 183 (337)
Q Consensus 139 ~~~----~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~-------------------------------~~~~i~~~~~s 183 (337)
.++ .+++++.++++++ .||.|++||+.+++.. +..+|++++|+
T Consensus 261 ~~~~~~~~~s~~~~~l~s~~--~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~ 338 (437)
T 3gre_A 261 THVEVCQFYGKNSVIVVGGS--SKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS 338 (437)
T ss_dssp EEEEECTTTCTTEEEEEEES--TTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE
T ss_pred EEEEeccccCCCccEEEEEc--CCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC
Confidence 666 4456788899887 5999999999876532 33558999999
Q ss_pred CCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-----------------------------------CcceeEEEEEee
Q 019672 184 SNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-----------------------------------TYPSTIFSLSFG 228 (337)
Q Consensus 184 ~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-----------------------------------~~~~~i~~l~fs 228 (337)
++++|++|+.||. |++||+.+++.+..+..+ .|...|++++|+
T Consensus 339 -~~~~l~s~~~d~~-i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~ 416 (437)
T 3gre_A 339 -NDKILLTDEATSS-IVMFSLNELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTC 416 (437)
T ss_dssp -TTEEEEEEGGGTE-EEEEETTCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEE
T ss_pred -CceEEEecCCCCe-EEEEECCCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeee
Confidence 7799999999997 699999999887766432 145679999999
Q ss_pred cC--CCcccEEEEEeCCCcEEEEe
Q 019672 229 QS--MQFQDILVATSSSGSLHVFS 250 (337)
Q Consensus 229 ~d--g~~~~~las~s~dg~v~iw~ 250 (337)
++ +. +|++|+.||+|+||+
T Consensus 417 ~~~~~~---~l~s~~~dG~I~iw~ 437 (437)
T 3gre_A 417 EVDETP---LLVACDNSGLIGIFQ 437 (437)
T ss_dssp ESSSSE---EEEEEETTSCEEEEC
T ss_pred ccCCce---EEEEEcCCceEEEeC
Confidence 98 66 999999999999995
No 93
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.96 E-value=2.3e-27 Score=213.71 Aligned_cols=232 Identities=11% Similarity=0.136 Sum_probs=173.7
Q ss_pred CCCCCeEEEEEcCC---CCEEEEEcCCc-eEEEeCCCCc-EEEEEee--CCEEEEEE------ccCCCEEEEEeCCCCCC
Q 019672 5 SSSYPVFFVSFNQD---NSGFALSTKDG-FKIFDSSTGR-LCYERAV--GAFSIVEM------LYSSSLLAIVGAGEQPS 71 (337)
Q Consensus 5 ~~~~~v~~~~fs~d---g~~la~g~~~g-~~vw~~~~~~-~~~~~~~--~~~~~~~~------~~~~~~~~~~~~g~~~~ 71 (337)
.+..+|++++|+|+ |++|++|+.++ +++||+.+++ .+..... ..+..+.+ .++.+.++..+
T Consensus 63 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~------ 136 (357)
T 3i2n_A 63 EKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGS------ 136 (357)
T ss_dssp EESSCEEEEECTTCCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEE------
T ss_pred cccCcEEEEEEcCCCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEe------
Confidence 46789999999999 68999998776 6999999886 5544433 34554443 23345555444
Q ss_pred CCCceEEEEECCCCC-EEEEEEcC-----CceeEEE----EcCC--eEEEEE-CCeEEEEECCCCeeeeeecCCCCCceE
Q 019672 72 LSPRRLCLFNTTTGT-ALRELNFL-----TSILAVR----LNKK--RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGL 138 (337)
Q Consensus 72 ~~d~~v~iwd~~~~~-~~~~~~~~-----~~v~~i~----~~~~--~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~ 138 (337)
.|+.|++||+++++ ++..+..+ ..+.++. ++++ .++++. ++.|++||+++++...... + ...+
T Consensus 137 -~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~-~--~~~v 212 (357)
T 3i2n_A 137 -RDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETN-I--KNGV 212 (357)
T ss_dssp -TTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEE-C--SSCE
T ss_pred -CCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecC-C--CCce
Confidence 48999999999887 66666432 2788887 4443 444455 7899999999988755433 2 3356
Q ss_pred EEEeeCC---CccEEEEcCCCCccEEEEEEccCCcc----------cccCceEEEEeCCCCC-EEEEEeCCCcEEEEEEc
Q 019672 139 CAFSPSL---NACFLAVPASTTKGSVLVYNVMELHS----------HCEAPLAAIVLSSNGM-YIATASEQGTIIRVFLV 204 (337)
Q Consensus 139 ~~~~~~~---~~~~la~~~~~~dg~v~i~d~~~~~~----------~~~~~i~~~~~s~dg~-~lat~s~dg~~i~vwd~ 204 (337)
.++.++| ++.++++++ .||.|++||+.+.+. .|..+|++++|+|+++ +|++++.||. |++||+
T Consensus 213 ~~~~~~~~~~~~~~l~~~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~-i~iwd~ 289 (357)
T 3i2n_A 213 CSLEFDRKDISMNKLVATS--LEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGG-LHLWKY 289 (357)
T ss_dssp EEEEESCSSSSCCEEEEEE--STTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSE-EEEEEE
T ss_pred EEEEcCCCCCCCCEEEEEC--CCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCc-EEEeec
Confidence 7777777 788888887 599999999987653 2458899999999999 8999999997 699999
Q ss_pred CCCc-------------------eeEeeccCCcceeEEEEEeecCCCcccEEE-EEeCCCcEEEEecCCC
Q 019672 205 SEAT-------------------KSYSFRRGTYPSTIFSLSFGQSMQFQDILV-ATSSSGSLHVFSPGFA 254 (337)
Q Consensus 205 ~~~~-------------------~~~~~~~~~~~~~i~~l~fs~dg~~~~~la-s~s~dg~v~iw~l~~~ 254 (337)
+++. .+..+. .+...|.+++|+|+++ +|+ +++.||+|+|||+.+.
T Consensus 290 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~--~~~~~v~~~~~s~~~~---~l~~s~~~d~~i~iw~~~~~ 354 (357)
T 3i2n_A 290 EYPIQRSKKDSEGIEMGVAGSVSLLQNVT--LSTQPISSLDWSPDKR---GLCVCSSFDQTVRVLIVTKL 354 (357)
T ss_dssp ECCSCC--CCTTSCCCCCCCEEEEEEEEE--CCSSCEEEEEECSSST---TEEEEEETTSEEEEEEECC-
T ss_pred CCCcccccccCCCCccccccccceeeccc--cCCCCeeEEEEcCCCC---eEEEEecCCCcEEEEECCCc
Confidence 8653 344443 2356799999999999 787 8999999999999754
No 94
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.96 E-value=4.6e-26 Score=227.65 Aligned_cols=237 Identities=11% Similarity=0.112 Sum_probs=184.7
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
.+..+|++++|+|++++|++|+.++ ++|||+.+++.+..... ..+..+.+.++.+.++.++ .|++|++||
T Consensus 53 ~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~-------~dg~i~vw~ 125 (814)
T 3mkq_A 53 VTETPVRAGKFIARKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGS-------DDLTVKLWN 125 (814)
T ss_dssp CCSSCEEEEEEEGGGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEE-------TTSEEEEEE
T ss_pred cCCCcEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEc-------CCCEEEEEE
Confidence 5788999999999999999999887 59999999988766654 4466666766777766554 489999999
Q ss_pred CCCC-CEEEEEE-cCCceeEEEEcC-Ce--EEEEE-CCeEEEEECCCCeeeeeecCCC-CCceEEEEeeCCCccEEEEcC
Q 019672 82 TTTG-TALRELN-FLTSILAVRLNK-KR--LVIVL-REKTYIYDANTLAILDTIDTVP-NLKGLCAFSPSLNACFLAVPA 154 (337)
Q Consensus 82 ~~~~-~~~~~~~-~~~~v~~i~~~~-~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~la~~~ 154 (337)
+.++ .....+. +..+|.++.|++ +. ++++. |+.|++||+.+++....+..+. .....+++++.+++.++++++
T Consensus 126 ~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~ 205 (814)
T 3mkq_A 126 WENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITAS 205 (814)
T ss_dssp GGGTSEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEEC
T ss_pred CCCCceEEEEEcCCCCcEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEe
Confidence 9987 4445554 456899999998 44 33344 8999999998887766665443 333444555545888999988
Q ss_pred CCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeec
Q 019672 155 STTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ 229 (337)
Q Consensus 155 ~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~ 229 (337)
.||.|++||+.+++.. |..+|.+++|+|+|++|++++.||. |++||+.+++.+..+..+ ...+.+++|+|
T Consensus 206 --~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~-v~vwd~~~~~~~~~~~~~--~~~v~~~~~~~ 280 (814)
T 3mkq_A 206 --DDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPIIISGSEDGT-LKIWNSSTYKVEKTLNVG--LERSWCIATHP 280 (814)
T ss_dssp --TTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEEEEEETTSC-EEEEETTTCSEEEEECCS--SSSEEEEEECT
T ss_pred --CCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCe-EEEEECCCCcEEEEeecC--CCcEEEEEEcc
Confidence 5999999999887654 3478999999999999999999998 699999999998887543 45799999999
Q ss_pred CCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 230 SMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 230 dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
+|+ ..+++++.++.+.+|++....
T Consensus 281 ~~~--~~~~~~~~~~~~~~~~~~~~~ 304 (814)
T 3mkq_A 281 TGR--KNYIASGFDNGFTVLSLGNDE 304 (814)
T ss_dssp TCG--GGEEEEEETTEEEEEECSCCS
T ss_pred CCC--ceEEEEEeCCCEEEEEcCCCC
Confidence 986 233555567778999986543
No 95
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.96 E-value=1.2e-26 Score=209.49 Aligned_cols=235 Identities=13% Similarity=0.089 Sum_probs=179.4
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEE-eeCCEEEEEEccCC--CEEEEEeCCCCCCCCCceEEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER-AVGAFSIVEMLYSS--SLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~-~~~~~~~~~~~~~~--~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+..+|++++|+|++++|++|+.++ +++||+.+++.+... +...+..+.+.+++ +.++..+ .|+.|++|
T Consensus 84 ~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~-------~dg~i~vw 156 (368)
T 3mmy_A 84 MHTGPVLDVCWSDDGSKVFTASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPNYSCVMTGS-------WDKTLKFW 156 (368)
T ss_dssp ECSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSSCEEEEEEE-------TTSEEEEE
T ss_pred cccCCEEEEEECcCCCEEEEEcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCCCCEEEEcc-------CCCcEEEE
Confidence 5788999999999999999999887 699999998766543 23456666663244 3344333 48999999
Q ss_pred ECCCCCEEEEEEcCCceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeee-cC-CCCCceEEEEeeCCCc--cEEEEcCC
Q 019672 81 NTTTGTALRELNFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTI-DT-VPNLKGLCAFSPSLNA--CFLAVPAS 155 (337)
Q Consensus 81 d~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~--~~la~~~~ 155 (337)
|+++++++..+..+..+.++.+.++.++++. ++.+.+|+++........ .. ........++.+++.. ..+++++
T Consensus 157 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 235 (368)
T 3mmy_A 157 DTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGS- 235 (368)
T ss_dssp CSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEE-
T ss_pred ECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEec-
Confidence 9999999999999889999999888887777 889999999876433222 21 1223334455544332 2367766
Q ss_pred CCccEEEEEEccCCcc---c-----ccC------------ceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeecc
Q 019672 156 TTKGSVLVYNVMELHS---H-----CEA------------PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR 215 (337)
Q Consensus 156 ~~dg~v~i~d~~~~~~---~-----~~~------------~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~ 215 (337)
.||.|++||+..... . +.. +|++++|+|+|++||+|+.||. |++||+.+++.+..+..
T Consensus 236 -~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~-i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 236 -IEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGR-FSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp -TTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSC-EEEEETTTTEEEEECCC
T ss_pred -CCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCe-EEEEECCCCcEEEEecC
Confidence 599999999987632 1 112 7999999999999999999998 69999999999888853
Q ss_pred CCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 216 GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 216 ~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
+...|.+++|+|+|+ +|++++.|+..+.|++-..
T Consensus 314 --~~~~v~~~~~s~~g~---~l~~~s~d~~~~~~~~~~~ 347 (368)
T 3mmy_A 314 --LDQPISACCFNHNGN---IFAYASSYDWSKGHEFYNP 347 (368)
T ss_dssp --CSSCEEEEEECTTSS---CEEEEECCCSTTCGGGCCT
T ss_pred --CCCCceEEEECCCCC---eEEEEecccccccccccCC
Confidence 356799999999999 9999999987776665433
No 96
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.96 E-value=6.7e-26 Score=200.37 Aligned_cols=229 Identities=10% Similarity=0.106 Sum_probs=173.2
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCC---cEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG---RLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+..+|++++|+|++++|++|+.++ +++|++... +.+.....+...+..+.++++.++..+ .|+.|++|
T Consensus 57 ~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~~~~-------~d~~i~~~ 129 (313)
T 3odt_A 57 TGQGFLNSVCYDSEKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSFQDGVVISGS-------WDKTAKVW 129 (313)
T ss_dssp ECSSCEEEEEEETTTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEEETTEEEEEE-------TTSEEEEE
T ss_pred cCCccEEEEEECCCCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEecCCEEEEEe-------CCCCEEEE
Confidence 4678999999999999999999887 599997654 334444444444445555777766555 48999999
Q ss_pred ECCCCCEEEEEEc-CCceeEEEEc---CCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCC
Q 019672 81 NTTTGTALRELNF-LTSILAVRLN---KKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS 155 (337)
Q Consensus 81 d~~~~~~~~~~~~-~~~v~~i~~~---~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (337)
| .++.+..+.. ..++.++.+. ++.++++. |+.|++||. .+....+.. .+...+.++.+++++. +++++
T Consensus 130 d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~i~i~d~--~~~~~~~~~-~~~~~i~~~~~~~~~~-~~~~~- 202 (313)
T 3odt_A 130 K--EGSLVYNLQAHNASVWDAKVVSFSENKFLTASADKTIKLWQN--DKVIKTFSG-IHNDVVRHLAVVDDGH-FISCS- 202 (313)
T ss_dssp E--TTEEEEEEECCSSCEEEEEEEETTTTEEEEEETTSCEEEEET--TEEEEEECS-SCSSCEEEEEEEETTE-EEEEE-
T ss_pred c--CCcEEEecccCCCceeEEEEccCCCCEEEEEECCCCEEEEec--CceEEEEec-cCcccEEEEEEcCCCe-EEEcc-
Confidence 9 5666666654 4588888874 45566665 889999994 445555544 1234566666666766 66666
Q ss_pred CCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecC
Q 019672 156 TTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS 230 (337)
Q Consensus 156 ~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~d 230 (337)
.||.|++||+.+++.. |..+|++++|+|+| .|++++.||. |++||+.+++.+..+.. +...|.+++|+|+
T Consensus 203 -~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~-v~iwd~~~~~~~~~~~~--~~~~i~~~~~~~~ 277 (313)
T 3odt_A 203 -NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG-DIVSCGEDRT-VRIWSKENGSLKQVITL--PAISIWSVDCMSN 277 (313)
T ss_dssp -TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS-CEEEEETTSE-EEEECTTTCCEEEEEEC--SSSCEEEEEECTT
T ss_pred -CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC-CEEEEecCCE-EEEEECCCCceeEEEec--cCceEEEEEEccC
Confidence 4899999999987754 34889999999999 5899999997 69999999999888853 3457999999999
Q ss_pred CCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 231 MQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 231 g~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
++ +++++.||.|+|||+++...
T Consensus 278 ~~----~~~~~~dg~i~iw~~~~~~~ 299 (313)
T 3odt_A 278 GD----IIVGSSDNLVRIFSQEKSRW 299 (313)
T ss_dssp SC----EEEEETTSCEEEEESCGGGC
T ss_pred CC----EEEEeCCCcEEEEeCCCCce
Confidence 97 56799999999999987644
No 97
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.9e-27 Score=236.55 Aligned_cols=240 Identities=12% Similarity=0.148 Sum_probs=179.5
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCC--cEEEEEee--CCEEEEEEccC--CCEEEEEeCCCCCCCCCc
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTG--RLCYERAV--GAFSIVEMLYS--SSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~--~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~g~~~~~~d~ 75 (337)
..+|.++|++++|+|+|++|++|+.+| ++|||+.++ +.+..... ..+..+.+.++ ++.++.++ .|+
T Consensus 5 l~gH~~~V~~l~~s~dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s-------~Dg 77 (753)
T 3jro_A 5 ANAHNELIHDAVLDYYGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS-------YDG 77 (753)
T ss_dssp ---CCCCEEEECCCSSSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEE-------TTS
T ss_pred cccCcceeEEEEECCCCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEe-------CCC
Confidence 457999999999999999999998887 699998743 44444433 45666666665 56665554 499
Q ss_pred eEEEEECCCCC--EEEEEE-cCCceeEEEEcCC----eEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCC--
Q 019672 76 RLCLFNTTTGT--ALRELN-FLTSILAVRLNKK----RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL-- 145 (337)
Q Consensus 76 ~v~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~----~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-- 145 (337)
+|++||+.+++ .+..+. +..+|.++.|+++ .+++++ |+.|++||++++..........+...+.++.++|
T Consensus 78 ~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~~ 157 (753)
T 3jro_A 78 KVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPAT 157 (753)
T ss_dssp CEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCCC
T ss_pred eEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecCcc
Confidence 99999999886 444444 4568999999875 355555 8999999998774333322223445677777777
Q ss_pred -----------CccEEEEcCCCCccEEEEEEccCCcc---------cccCceEEEEeCCC---CCEEEEEeCCCcEEEEE
Q 019672 146 -----------NACFLAVPASTTKGSVLVYNVMELHS---------HCEAPLAAIVLSSN---GMYIATASEQGTIIRVF 202 (337)
Q Consensus 146 -----------~~~~la~~~~~~dg~v~i~d~~~~~~---------~~~~~i~~~~~s~d---g~~lat~s~dg~~i~vw 202 (337)
++.++++++ .||.|++||+.+... .|..+|++++|+|+ |++|++|+.||+ |++|
T Consensus 158 ~~~~~~~~~~~d~~~l~sgs--~dg~I~iwd~~~~~~~~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~-I~iw 234 (753)
T 3jro_A 158 IEEDGEHNGTKESRKFVTGG--ADNLVKIWKYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRT-CIIW 234 (753)
T ss_dssp ---------CGGGCCEEEEE--TTSCEEEEEEETTTTEEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSC-EEEE
T ss_pred cccccccccCCCCCEEEEEE--CCCeEEEEeccCCcccceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCE-EEEe
Confidence 477888887 599999999987632 13488999999999 999999999998 6999
Q ss_pred EcCCCceeE---eeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 203 LVSEATKSY---SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 203 d~~~~~~~~---~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
|+.+++... ......+...|++++|+|+|+ +|++++.||.|+||++....
T Consensus 235 d~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~---~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 235 TQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGN---VLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp EESSSSSCCBCCBSSSSCCSSCCCCEEECTTTC---CEEEECSSSCEECCBCCSSS
T ss_pred cCCCCCCcceeEEeccCCCCCceEEEEEcCCCC---EEEEEcCCCEEEEEecCCCC
Confidence 999874211 111222456799999999999 99999999999999998643
No 98
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=4.2e-26 Score=206.90 Aligned_cols=242 Identities=9% Similarity=0.077 Sum_probs=175.2
Q ss_pred EEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC--CCCEEEEEE-cCCceeEEEEcC----CeEEEEE-CCe
Q 019672 43 ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTALRELN-FLTSILAVRLNK----KRLVIVL-REK 114 (337)
Q Consensus 43 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~--~~~~~~~~~-~~~~v~~i~~~~----~~~~v~~-d~~ 114 (337)
..+...+..+++.++.+.++..+ .|+.|++||+. +++.+..+. +..+|.++.|++ +.++++. |+.
T Consensus 8 ~~h~~~v~~~~~s~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~ 80 (379)
T 3jrp_A 8 NAHNELIHDAVLDYYGKRLATCS-------SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGK 80 (379)
T ss_dssp EECCCCEEEEEECSSSSEEEEEE-------TTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cCCcccEEEEEEcCCCCEEEEEE-------CCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCE
Confidence 34446677777777777776655 38999999998 445555665 445899999973 4555555 899
Q ss_pred EEEEECCCCe--eeeeecCCCCCceEEEEeeCCC--ccEEEEcCCCCccEEEEEEccCCccc-------ccCceEEEEeC
Q 019672 115 TYIYDANTLA--ILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELHSH-------CEAPLAAIVLS 183 (337)
Q Consensus 115 i~i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~la~~~~~~dg~v~i~d~~~~~~~-------~~~~i~~~~~s 183 (337)
|++||+.+++ .+..+..+ ...+.+++++|+ +.++++++ .||.|++||+.+.... +..+|.+++|+
T Consensus 81 v~iwd~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~--~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~~ 156 (379)
T 3jrp_A 81 VLIWKEENGRWSQIAVHAVH--SASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWA 156 (379)
T ss_dssp EEEEEEETTEEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCTTSCCCEEEEECCTTCEEEEEEC
T ss_pred EEEEEcCCCceeEeeeecCC--CcceEEEEeCCCCCCCEEEEec--CCCcEEEEecCCCCceeeEEecCCCCceEEEEEc
Confidence 9999999886 45555443 345777777777 78888887 5999999999876322 34889999999
Q ss_pred C-------------CCCEEEEEeCCCcEEEEEEcCCCcee----EeeccCCcceeEEEEEeecC---CCcccEEEEEeCC
Q 019672 184 S-------------NGMYIATASEQGTIIRVFLVSEATKS----YSFRRGTYPSTIFSLSFGQS---MQFQDILVATSSS 243 (337)
Q Consensus 184 ~-------------dg~~lat~s~dg~~i~vwd~~~~~~~----~~~~~~~~~~~i~~l~fs~d---g~~~~~las~s~d 243 (337)
| ++++|++++.||. |++||+++++.. ..+. .|...|.+++|+|+ ++ +|++++.|
T Consensus 157 ~~~~~~~~~~~~~~~~~~l~~~~~dg~-i~i~d~~~~~~~~~~~~~~~--~h~~~v~~~~~sp~~~~~~---~l~s~~~d 230 (379)
T 3jrp_A 157 PATIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLE--GHSDWVRDVAWSPTVLLRS---YLASVSQD 230 (379)
T ss_dssp CCC----------CTTCEEEEEETTSC-EEEEEEETTTTEEEEEEEEC--CCSSCEEEEEECCCCSSSE---EEEEEETT
T ss_pred CccccccccccCCCCCCEEEEEeCCCe-EEEEEecCCCcceeeEEEEe--cccCcEeEEEECCCCCCCC---eEEEEeCC
Confidence 9 7999999999998 699999877533 3332 24567999999999 77 99999999
Q ss_pred CcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 244 GSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 244 g~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
|+|+|||+.....+.. .. ... ...+...+..+.+.++++.|++++.||.+++|+++..
T Consensus 231 g~i~iwd~~~~~~~~~----~~----~~~--------~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~ 288 (379)
T 3jrp_A 231 RTCIIWTQDNEQGPWK----KT----LLK--------EEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLE 288 (379)
T ss_dssp SCEEEEEESSTTSCCE----EE----ESS--------SSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEET
T ss_pred CEEEEEeCCCCCccce----ee----eec--------cccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCC
Confidence 9999999987543210 00 000 0000011122334566689999999999999999853
No 99
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.95 E-value=1.5e-26 Score=215.46 Aligned_cols=228 Identities=12% Similarity=0.239 Sum_probs=179.8
Q ss_pred CCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 4 QSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 4 ~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
.++..+|++++| ++++|++|+.++ +++||+.+++.+.....+...+..+.++++.++.++ .|++|++||+
T Consensus 170 ~~h~~~v~~l~~--~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s-------~dg~i~vwd~ 240 (435)
T 1p22_A 170 TGHTGSVLCLQY--DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCS-------KDRSIAVWDM 240 (435)
T ss_dssp CCCSSCEEEEEC--CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEE-------TTSCEEEEEC
T ss_pred cCCCCcEEEEEE--CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEee-------CCCcEEEEeC
Confidence 467889999999 788999998887 699999999988777666556667777777666554 4899999999
Q ss_pred CCCCEE---EEE-EcCCceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCC
Q 019672 83 TTGTAL---REL-NFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (337)
Q Consensus 83 ~~~~~~---~~~-~~~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 157 (337)
.+++.+ ..+ .+...|.++.++++.++++. |+.|++||+++++.+..+..+.. .+.++.++ +.++++++ .
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--~v~~~~~~--~~~l~~g~--~ 314 (435)
T 1p22_A 241 ASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--GIACLQYR--DRLVVSGS--S 314 (435)
T ss_dssp SSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTTCCEEEEEECCSS--CEEEEEEE--TTEEEEEE--T
T ss_pred CCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCCeEEEEECCcCcEEEEEcCCCC--cEEEEEeC--CCEEEEEe--C
Confidence 988765 233 34458999999888888887 89999999999999888876544 56666664 34788877 5
Q ss_pred ccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc---------eeEeeccCCcceeEE
Q 019672 158 KGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT---------KSYSFRRGTYPSTIF 223 (337)
Q Consensus 158 dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~---------~~~~~~~~~~~~~i~ 223 (337)
||.|++||+.+++.. |..+|.+++| ++++|++|+.||. |++||+.+++ .+..+. .|...|.
T Consensus 315 dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~~~l~sg~~dg~-i~vwd~~~~~~~~~~~~~~~~~~~~--~h~~~v~ 389 (435)
T 1p22_A 315 DNTIRLWDIECGACLRVLEGHEELVRCIRF--DNKRIVSGAYDGK-IKVWDLVAALDPRAPAGTLCLRTLV--EHSGRVF 389 (435)
T ss_dssp TSCEEEEETTTCCEEEEECCCSSCEEEEEC--CSSEEEEEETTSC-EEEEEHHHHTSTTSCTTTTEEEEEC--CCSSCCC
T ss_pred CCeEEEEECCCCCEEEEEeCCcCcEEEEEe--cCCEEEEEeCCCc-EEEEECCCCCCccccccchheeecc--CCCCCeE
Confidence 999999999987754 3488999999 7889999999998 6999997766 666664 2456799
Q ss_pred EEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 224 SLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 224 ~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
+++| +++ +|++++.||+|+|||+.....
T Consensus 390 ~l~~--~~~---~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 390 RLQF--DEF---QIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CEEE--CSS---CEEECCSSSEEEEEC------
T ss_pred EEEe--CCC---EEEEEeCCCEEEEEECCCCCC
Confidence 9999 677 899999999999999976543
No 100
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.95 E-value=1.7e-26 Score=207.19 Aligned_cols=230 Identities=13% Similarity=0.093 Sum_probs=179.8
Q ss_pred CCCCCeEEEEEcCCCC-EEEEEcCCc-eEEEeC-CCCcEEEE-E--eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEE
Q 019672 5 SSSYPVFFVSFNQDNS-GFALSTKDG-FKIFDS-STGRLCYE-R--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~-~la~g~~~g-~~vw~~-~~~~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~ 78 (337)
.+..+|++++|+|+++ +|++|+.++ +++||+ .+++...- . +...+..+.+.+ .+.++..+ .|+.|+
T Consensus 54 ~~~~~v~~~~~~~~~~~~l~~~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~-~~~l~s~~-------~d~~i~ 125 (342)
T 1yfq_A 54 RYKHPLLCCNFIDNTDLQIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG-DDKLIAAS-------WDGLIE 125 (342)
T ss_dssp ECSSCEEEEEEEESSSEEEEEEETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET-TTEEEEEE-------TTSEEE
T ss_pred ecCCceEEEEECCCCCcEEEEEcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC-CCEEEEEc-------CCCeEE
Confidence 4678999999999999 999998776 699999 88765322 2 334566666666 66666554 489999
Q ss_pred EEECCC---------CCEEEEEEcCCceeEEEEcCCeEEEEE-CCeEEEEECCC-CeeeeeecCCCCCceEEEEeeCC-C
Q 019672 79 LFNTTT---------GTALRELNFLTSILAVRLNKKRLVIVL-REKTYIYDANT-LAILDTIDTVPNLKGLCAFSPSL-N 146 (337)
Q Consensus 79 iwd~~~---------~~~~~~~~~~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~-~ 146 (337)
+||+++ ++++..+.+...|.++.++++.++++. ++.|++||+++ +..............+.+++++| +
T Consensus 126 iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~ 205 (342)
T 1yfq_A 126 VIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKE 205 (342)
T ss_dssp EECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEEEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGG
T ss_pred EEcccccccccccccCCeeeEEeeCCceEEEEecCCcEEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCC
Confidence 999987 777766777789999999999977776 88999999987 54322211122334577888888 8
Q ss_pred ccEEEEcCCCCccEEEEEEccCC------ccc-----ccC---------ceEEEEeCCCCCEEEEEeCCCcEEEEEEcCC
Q 019672 147 ACFLAVPASTTKGSVLVYNVMEL------HSH-----CEA---------PLAAIVLSSNGMYIATASEQGTIIRVFLVSE 206 (337)
Q Consensus 147 ~~~la~~~~~~dg~v~i~d~~~~------~~~-----~~~---------~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~ 206 (337)
+.++++++ .+|.|++||+... +.. +.. +|.+++|+|+|++|++++.||. |++||+.+
T Consensus 206 ~~~l~~~~--~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~-i~vwd~~~ 282 (342)
T 1yfq_A 206 QEGYACSS--IDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGI-ISCWNLQT 282 (342)
T ss_dssp GCEEEEEE--TTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSC-EEEEETTT
T ss_pred CCEEEEEe--cCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCce-EEEEcCcc
Confidence 88999888 5999999999776 222 212 8999999999999999999998 69999999
Q ss_pred CceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCc-EEEEec
Q 019672 207 ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGS-LHVFSP 251 (337)
Q Consensus 207 ~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~-v~iw~l 251 (337)
++.+..+. ++|...|.+++ |+++ +|++++.||+ .+.|..
T Consensus 283 ~~~~~~~~-~~h~~~v~~~~--~~~~---~l~s~s~Dg~~~~~~~~ 322 (342)
T 1yfq_A 283 RKKIKNFA-KFNEDSVVKIA--CSDN---ILCLATSDDTFKTNAAI 322 (342)
T ss_dssp TEEEEECC-CCSSSEEEEEE--ECSS---EEEEEEECTHHHHCSSS
T ss_pred HhHhhhhh-cccCCCceEec--CCCC---eEEEEecCCcccccccc
Confidence 99988875 33367899999 9999 9999999998 665554
No 101
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.5e-27 Score=227.25 Aligned_cols=238 Identities=11% Similarity=0.081 Sum_probs=164.9
Q ss_pred CCCCeEEEEEcCC------CCEEEEEcCCc-eEEEeCCCCcEE-----------EEEee--CCEEEEEEccCCCEEEEEe
Q 019672 6 SSYPVFFVSFNQD------NSGFALSTKDG-FKIFDSSTGRLC-----------YERAV--GAFSIVEMLYSSSLLAIVG 65 (337)
Q Consensus 6 ~~~~v~~~~fs~d------g~~la~g~~~g-~~vw~~~~~~~~-----------~~~~~--~~~~~~~~~~~~~~~~~~~ 65 (337)
+.+.|++++|+|+ +.+||+|+.|+ ++|||+.+++.. ..... ..+..+++.. .+.++ ++
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~-~~~la-sg 283 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLS-PTTVV-CG 283 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESS-SSEEE-EE
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecC-CCeEE-EE
Confidence 4578999999997 57899888877 699999766321 12222 3445555543 24433 33
Q ss_pred CCCCCCCCCceEEEEECCCCC-EEEEEE-cCCceeEE--EEcCCe---EEEEE-CCeEEEEECCCCeeeeeecCCCCCce
Q 019672 66 AGEQPSLSPRRLCLFNTTTGT-ALRELN-FLTSILAV--RLNKKR---LVIVL-REKTYIYDANTLAILDTIDTVPNLKG 137 (337)
Q Consensus 66 ~g~~~~~~d~~v~iwd~~~~~-~~~~~~-~~~~v~~i--~~~~~~---~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~ 137 (337)
+ .|++|++||+++++ +...+. |...|.+| .++++. ++.++ |++|+|||+++++.+..+..+.....
T Consensus 284 s------~DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~ 357 (524)
T 2j04_B 284 F------KNGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSN 357 (524)
T ss_dssp E------TTSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCS
T ss_pred e------CCCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCc
Confidence 3 59999999998764 344454 45689999 456643 34444 89999999998776555543322122
Q ss_pred EEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc----
Q 019672 138 LCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT---- 208 (337)
Q Consensus 138 ~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~---- 208 (337)
+.+++++|++..+++++ .|++|++||++++... |.++|++|+|||+|++||+|+.||+ |+|||+..+.
T Consensus 358 v~~v~fsp~~~~l~s~~--~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgt-v~lwd~~~~~~~~~ 434 (524)
T 2j04_B 358 LVPVVYCPQIYSYIYSD--GASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGS-LIITNAARRLLHGI 434 (524)
T ss_dssp CCCEEEETTTTEEEEEC--SSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTE-EECCBSCSSTTTCC
T ss_pred ccceEeCCCcCeEEEeC--CCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCE-EEEEechHhhcccc
Confidence 44556677777888877 4899999999987643 4589999999999999999999998 6999864220
Q ss_pred ----------eeEeec----------------------------cCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEe
Q 019672 209 ----------KSYSFR----------------------------RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFS 250 (337)
Q Consensus 209 ----------~~~~~~----------------------------~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~ 250 (337)
.+..+. ...+...|.+|+|||+++...+||+|+.||+|+||+
T Consensus 435 ~~~~~~~~~~~v~~v~~sp~g~~~~~~~~~~~~~~~~~g~~~~~l~gh~~~V~~Vafsp~~~~~~~lAsg~~~g~vrlw~ 514 (524)
T 2j04_B 435 KNSSATQKSLRLWKWDYSIKDDKYRIDSSYEVYPLTVNDVSKAKIDAHGINITCTKWNETSAGGKCYAFSNSAGLLTLEY 514 (524)
T ss_dssp ------CCCCEEEECBCCSSSCEEEECCCCCCCC-------------CCCSCCCEEECCSTTTTTEEEEECTTSEEEEEE
T ss_pred ccCccceeeeEEEEeccCCCCCeEEccCCceecccccCCcceeeecCCCceEEEEECCCCCCccHHHHhhccCceEEEEE
Confidence 111110 001234589999999942112899999999999999
Q ss_pred cCCC
Q 019672 251 PGFA 254 (337)
Q Consensus 251 l~~~ 254 (337)
+..+
T Consensus 515 l~~~ 518 (524)
T 2j04_B 515 LSLE 518 (524)
T ss_dssp CSCC
T ss_pred cccc
Confidence 8754
No 102
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=5.6e-26 Score=201.43 Aligned_cols=234 Identities=12% Similarity=0.114 Sum_probs=153.8
Q ss_pred eEEEEEcCCCC---EEEEEcCCceEEEeCCCC---cEEEEEeeCCEEEEEEcc-------------------------CC
Q 019672 10 VFFVSFNQDNS---GFALSTKDGFKIFDSSTG---RLCYERAVGAFSIVEMLY-------------------------SS 58 (337)
Q Consensus 10 v~~~~fs~dg~---~la~g~~~g~~vw~~~~~---~~~~~~~~~~~~~~~~~~-------------------------~~ 58 (337)
+.++-|-.-|- +++++++..+++|+..+. ++++..+.+.+.+..+.+ ++
T Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~sp 121 (356)
T 2w18_A 42 VSAMFWERAGCKEPCIITACEDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSS 121 (356)
T ss_dssp EEEEEEC----CEEEEEEEESSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC--
T ss_pred EeeeeeccCCCCccEEEEeccceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECC
Confidence 55666655443 789999999999998888 788887766544433333 33
Q ss_pred C----EEEEEeCCCC---------------CCCCCceEEEEEC-CCCCEEEEEEcC-CceeEEEEcC-----CeEEEEE-
Q 019672 59 S----LLAIVGAGEQ---------------PSLSPRRLCLFNT-TTGTALRELNFL-TSILAVRLNK-----KRLVIVL- 111 (337)
Q Consensus 59 ~----~~~~~~~g~~---------------~~~~d~~v~iwd~-~~~~~~~~~~~~-~~v~~i~~~~-----~~~~v~~- 111 (337)
+ ...++++|.. ....|++|++|++ ..|+.+..+..+ ..+..++|++ ..++.++
T Consensus 122 d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~ 201 (356)
T 2w18_A 122 DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTI 201 (356)
T ss_dssp ----CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEET
T ss_pred CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecC
Confidence 3 2222221100 0013888999998 447766665444 3555556654 3444444
Q ss_pred CCeEEEEECCCCeeeeeecCCCC-CceEEEEeeCCCccEEEE-----------cCCCCccEEEEEEccCCcccc------
Q 019672 112 REKTYIYDANTLAILDTIDTVPN-LKGLCAFSPSLNACFLAV-----------PASTTKGSVLVYNVMELHSHC------ 173 (337)
Q Consensus 112 d~~i~i~d~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~la~-----------~~~~~dg~v~i~d~~~~~~~~------ 173 (337)
|++|+|||+++++.++++..+.. ...+++++++|++.++++ .|+ .|++|++||..+++...
T Consensus 202 D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs-~D~tIklWd~~tgk~l~v~~~~~ 280 (356)
T 2w18_A 202 MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRS-PVFQLIVINPKTTLSVGVMLYCL 280 (356)
T ss_dssp TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC-------------CCEEEEEEETTTTEEEEEEEECC
T ss_pred CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccC-CCcEEEEEECCCCEEEEEEEeec
Confidence 99999999999999999875432 234555555666766532 233 59999999999886532
Q ss_pred ----cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEE
Q 019672 174 ----EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVF 249 (337)
Q Consensus 174 ----~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw 249 (337)
...+.+..+ +|.++|+|+.||+ |||||+.+|+.+.++. +++...+.+++|||||+ +|++|+.|++|+||
T Consensus 281 p~Gh~~~~lsg~~--sg~~lASgS~DgT-IkIWDl~tGk~l~tL~-gH~~~vvs~vafSPDG~---~LaSGS~D~TIklW 353 (356)
T 2w18_A 281 PPGQAGRFLEGDV--KDHCAAAILTSGT-IAIWDLLLGQCTALLP-PVSDQHWSFVKWSGTDS---HLLAGQKDGNIFVY 353 (356)
T ss_dssp CTTCCCCEEEEEE--ETTEEEEEETTSC-EEEEETTTCSEEEEEC-CC--CCCCEEEECSSSS---EEEEECTTSCEEEE
T ss_pred cCCCcceeEcccc--CCCEEEEEcCCCc-EEEEECCCCcEEEEec-CCCCCeEEEEEECCCCC---EEEEEECCCcEEEe
Confidence 112222222 3568999999998 6999999999999985 33333355689999999 99999999999999
Q ss_pred ec
Q 019672 250 SP 251 (337)
Q Consensus 250 ~l 251 (337)
|+
T Consensus 354 d~ 355 (356)
T 2w18_A 354 HY 355 (356)
T ss_dssp EE
T ss_pred cC
Confidence 96
No 103
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=1.7e-26 Score=212.76 Aligned_cols=236 Identities=9% Similarity=0.110 Sum_probs=179.4
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-eEEEeCCCC-------cEEEEE--eeCCEEEEEEccCC-CEEEEEeCCCCCC
Q 019672 4 QSSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTG-------RLCYER--AVGAFSIVEMLYSS-SLLAIVGAGEQPS 71 (337)
Q Consensus 4 ~~~~~~v~~~~fs~-dg~~la~g~~~g-~~vw~~~~~-------~~~~~~--~~~~~~~~~~~~~~-~~~~~~~~g~~~~ 71 (337)
.+|..+|++++|+| ++++|++|+.++ ++|||+.++ +.+... +...+..+.+.++. +.++..+
T Consensus 78 ~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~------ 151 (402)
T 2aq5_A 78 CGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAG------ 151 (402)
T ss_dssp CCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEE------
T ss_pred ecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEc------
Confidence 46889999999999 999999999887 699999887 333333 33456666666665 4555444
Q ss_pred CCCceEEEEECCCCCEEEEE--E-cCCceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeee-cCCCCCceEEEEeeC
Q 019672 72 LSPRRLCLFNTTTGTALREL--N-FLTSILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTI-DTVPNLKGLCAFSPS 144 (337)
Q Consensus 72 ~~d~~v~iwd~~~~~~~~~~--~-~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~ 144 (337)
.|++|++||+++++.+..+ . +...|.++.|+++. ++++. |+.|++||+++++.+..+ ..+... .+..+.++
T Consensus 152 -~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~-~~~~~~~~ 229 (402)
T 2aq5_A 152 -CDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGT-RPVHAVFV 229 (402)
T ss_dssp -TTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSS-SCCEEEEC
T ss_pred -CCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCC-cceEEEEc
Confidence 4899999999999998888 3 45689999998754 55554 899999999999988887 444332 24555667
Q ss_pred CCccEEEEc---CCCCccEEEEEEccCCccc-------ccCceEEEEeCCCCCEEEE-EeCCCcEEEEEEcCCCce-eEe
Q 019672 145 LNACFLAVP---ASTTKGSVLVYNVMELHSH-------CEAPLAAIVLSSNGMYIAT-ASEQGTIIRVFLVSEATK-SYS 212 (337)
Q Consensus 145 ~~~~~la~~---~~~~dg~v~i~d~~~~~~~-------~~~~i~~~~~s~dg~~lat-~s~dg~~i~vwd~~~~~~-~~~ 212 (337)
+++.+++++ + .|+.|++||+.+.... +...|.+++|+|+|++|++ |+.||. |++||+.+++. +..
T Consensus 230 ~~~~~l~~g~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~-i~i~d~~~~~~~~~~ 306 (402)
T 2aq5_A 230 SEGKILTTGFSRM--SERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSS-IRYFEITSEAPFLHY 306 (402)
T ss_dssp STTEEEEEEECTT--CCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSC-EEEEEECSSTTCEEE
T ss_pred CCCcEEEEeccCC--CCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCe-EEEEEecCCCcceEe
Confidence 788888887 4 4899999999886541 2377999999999999975 557997 69999999884 444
Q ss_pred eccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 213 FRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 213 ~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
+....+...|.+++|+|++. ++++ .++.+++|++....
T Consensus 307 l~~~~~~~~v~~~~~sp~~~---~~~s--~~~~~~~~~l~~~~ 344 (402)
T 2aq5_A 307 LSMFSSKESQRGMGYMPKRG---LEVN--KCEIARFYKLHERK 344 (402)
T ss_dssp EEEECCSSCCSEEEECCGGG---SCGG--GTEEEEEEEEETTE
T ss_pred ecccccCCcccceEEecccc---ccee--cceeEEEEEcCCCc
Confidence 43322346799999999998 6664 56799999997643
No 104
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=1.7e-25 Score=204.98 Aligned_cols=276 Identities=12% Similarity=0.075 Sum_probs=187.5
Q ss_pred eEEEeCCCCcEEEEE--eeCCEEEEEEcc-CCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEE--------------
Q 019672 30 FKIFDSSTGRLCYER--AVGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELN-------------- 92 (337)
Q Consensus 30 ~~vw~~~~~~~~~~~--~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~-------------- 92 (337)
+++|+++.++..... +...+..+++.+ +++.++..+ .|+.|++||+.+++....+.
T Consensus 25 ~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (408)
T 4a11_B 25 RRVLGLELNKDRDVERIHGGGINTLDIEPVEGRYMLSGG-------SDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDV 97 (408)
T ss_dssp HHHHTEEECTTEEECCCCSSCEEEEEECTTTCCEEEEEE-------TTSCEEEEECCCCSSSSCEEECEEEEECTTCTTC
T ss_pred ceeeccccCcceeeeeccCCcEEEEEEecCCCCEEEEEc-------CCCeEEEEECCCCcccceEecccccccccccccc
Confidence 467776655444333 345666677766 667766655 38999999999887655443
Q ss_pred cCCceeEEEEcC-C--eEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEee-CCCccEEEEcCCCCccEEEEEEcc
Q 019672 93 FLTSILAVRLNK-K--RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSP-SLNACFLAVPASTTKGSVLVYNVM 167 (337)
Q Consensus 93 ~~~~v~~i~~~~-~--~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~dg~v~i~d~~ 167 (337)
+...|.++.|++ + .++.+. |+.|++||+.+++.+..+... .....+++.+ ++++.++++++ .+|.|++||+.
T Consensus 98 ~~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~~v~~~d~~ 174 (408)
T 4a11_B 98 HRYSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFE-ETVYSHHMSPVSTKHCLVAVGT--RGPKVQLCDLK 174 (408)
T ss_dssp CSSCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEEECS-SCEEEEEECSSCSSCCEEEEEE--SSSSEEEEESS
T ss_pred CCCcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceeccCC-CceeeeEeecCCCCCcEEEEEc--CCCeEEEEeCC
Confidence 566899999987 3 455555 899999999999888777643 2222233333 22455788777 58999999998
Q ss_pred CCccc-----ccCceEEEEeCCCCC-EEEEEeCCCcEEEEEEcCCCc-eeEeecc-------------CCcceeEEEEEe
Q 019672 168 ELHSH-----CEAPLAAIVLSSNGM-YIATASEQGTIIRVFLVSEAT-KSYSFRR-------------GTYPSTIFSLSF 227 (337)
Q Consensus 168 ~~~~~-----~~~~i~~~~~s~dg~-~lat~s~dg~~i~vwd~~~~~-~~~~~~~-------------~~~~~~i~~l~f 227 (337)
+++.. |..+|.+++|+|+++ +|++|+.||. |++||+++++ .+..+.. ..+...|.+++|
T Consensus 175 ~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~-i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 253 (408)
T 4a11_B 175 SGSCSHILQGHRQEILAVSWSPRYDYILATASADSR-VKLWDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCF 253 (408)
T ss_dssp SSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSC-EEEEETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEE
T ss_pred CcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCc-EEEEECCCCCcccccccccccccceeeccccccccCceeEEEE
Confidence 87654 348899999999999 5999999998 6999998775 3332210 124567999999
Q ss_pred ecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCc--------cccccc---------ccccccceeecccccc------
Q 019672 228 GQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGR--------TSSILG---------SILPESVNEVLDPADH------ 284 (337)
Q Consensus 228 s~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~--------~~~~~~---------~~~~~~~~~~w~~~~~------ 284 (337)
+|+++ +|++++.||.|++||+.+......... ...+.. ....+....+|+....
T Consensus 254 ~~~~~---~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~ 330 (408)
T 4a11_B 254 TSDGL---HLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYGSTIAVYTVYSGEQITML 330 (408)
T ss_dssp CTTSS---EEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEETTEEEEEETTTCCEEEEE
T ss_pred cCCCC---EEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecCCEEEEEECcCCcceeee
Confidence 99999 999999999999999987654321100 000000 0001112234443322
Q ss_pred ---eeeeeccCCCcccCEEEEEEeCCcEEEEEEecCCC
Q 019672 285 ---HVLRNAFPAGVKRASVSVITYNGYFVEYIFSINNC 319 (337)
Q Consensus 285 ---~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~~~ 319 (337)
...+..+.+.++++.|++++.||.+++|+++..+.
T Consensus 331 ~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~ 368 (408)
T 4a11_B 331 KGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEP 368 (408)
T ss_dssp CCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC---
T ss_pred ccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCc
Confidence 12234455677889999999999999999976543
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.95 E-value=2.1e-26 Score=212.19 Aligned_cols=233 Identities=11% Similarity=0.076 Sum_probs=173.3
Q ss_pred CeEEEEEcCCCCEEE-EEcCCc-eEEEeCCCCcE----E--EEEeeCCEEEEEEcc-CCCEEEEEeCCCCCCCCCceEEE
Q 019672 9 PVFFVSFNQDNSGFA-LSTKDG-FKIFDSSTGRL----C--YERAVGAFSIVEMLY-SSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 9 ~v~~~~fs~dg~~la-~g~~~g-~~vw~~~~~~~----~--~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
....++++|+...++ +|+.+| ++||++..... + +..+...+..+++.+ +.+.++..+ .|++|++
T Consensus 36 ~~~~~~~~~~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s-------~dg~v~v 108 (402)
T 2aq5_A 36 DSGFCAVNPKFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGS-------EDCTVMV 108 (402)
T ss_dssp SSCSEEECSSEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEE-------TTSEEEE
T ss_pred CCCcEEECCCeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEe-------CCCeEEE
Confidence 345688999887655 455555 79999865422 1 222335566677766 566666554 4899999
Q ss_pred EECCCC-------CEEEEEE-cCCceeEEEEcCCe---EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCc
Q 019672 80 FNTTTG-------TALRELN-FLTSILAVRLNKKR---LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNA 147 (337)
Q Consensus 80 wd~~~~-------~~~~~~~-~~~~v~~i~~~~~~---~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (337)
||+.++ +++..+. +...|.++.|+++. ++.+. |+.|++||+++++.+..+....+...+.+++++|++
T Consensus 109 w~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 188 (402)
T 2aq5_A 109 WEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDG 188 (402)
T ss_dssp EECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTS
T ss_pred EEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCCceEEEEECCCC
Confidence 999987 5566665 45689999999874 34444 889999999999988888322334567888888889
Q ss_pred cEEEEcCCCCccEEEEEEccCCcccc------cC-ceEEEEeCCCCCEEEEE---eCCCcEEEEEEcCCCce-eEeeccC
Q 019672 148 CFLAVPASTTKGSVLVYNVMELHSHC------EA-PLAAIVLSSNGMYIATA---SEQGTIIRVFLVSEATK-SYSFRRG 216 (337)
Q Consensus 148 ~~la~~~~~~dg~v~i~d~~~~~~~~------~~-~i~~~~~s~dg~~lat~---s~dg~~i~vwd~~~~~~-~~~~~~~ 216 (337)
.++++++ .||.|++||+++++... .. .+.+++|+|+|++|++| +.||. |++||+++++. +.....
T Consensus 189 ~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~-i~iwd~~~~~~~~~~~~~- 264 (402)
T 2aq5_A 189 ALICTSC--RDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQ-VALWDTKHLEEPLSLQEL- 264 (402)
T ss_dssp SCEEEEE--TTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEE-EEEEETTBCSSCSEEEEC-
T ss_pred CEEEEEe--cCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCce-EEEEcCccccCCceEEec-
Confidence 8999888 59999999999876532 23 38999999999999999 78887 69999998765 333322
Q ss_pred CcceeEEEEEeecCCCcccEEE-EEeCCCcEEEEecCCCc
Q 019672 217 TYPSTIFSLSFGQSMQFQDILV-ATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 217 ~~~~~i~~l~fs~dg~~~~~la-s~s~dg~v~iw~l~~~~ 255 (337)
.+...|.+++|+|+++ +|+ +|+.||+|++||+....
T Consensus 265 ~~~~~v~~~~~s~~~~---~l~~~g~~dg~i~i~d~~~~~ 301 (402)
T 2aq5_A 265 DTSSGVLLPFFDPDTN---IVYLCGKGDSSIRYFEITSEA 301 (402)
T ss_dssp CCCSSCEEEEEETTTT---EEEEEETTCSCEEEEEECSST
T ss_pred cCCCceeEEEEcCCCC---EEEEEEcCCCeEEEEEecCCC
Confidence 2345689999999999 775 56679999999998765
No 106
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=4.4e-27 Score=219.28 Aligned_cols=238 Identities=16% Similarity=0.109 Sum_probs=167.7
Q ss_pred CCCCCCeEEEEEcC-CCCEEEEEcCCc-eEEEeCCCCcEEEEEe--eCC--EEEEEEccCCCEEEEEeCCCCCCCCCceE
Q 019672 4 QSSSYPVFFVSFNQ-DNSGFALSTKDG-FKIFDSSTGRLCYERA--VGA--FSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (337)
Q Consensus 4 ~~~~~~v~~~~fs~-dg~~la~g~~~g-~~vw~~~~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~g~~~~~~d~~v 77 (337)
.+|..+|++++|+| ++.+|++|+.|+ +++||++++....... ... +..+.+.++...++..+ .|++|
T Consensus 161 ~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~-------~dg~i 233 (435)
T 4e54_B 161 IGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGD-------NVGNV 233 (435)
T ss_dssp CSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEEC-------SSSBE
T ss_pred cCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEe-------CCCcE
Confidence 46889999999998 788999998887 6999998765433222 122 23345555666655443 48999
Q ss_pred EEEECCCCCEEEEEE-cCCceeEEEEcCCe--EE-EEE-CCeEEEEECCCCeeeeeec-CCCCCceEEEEeeCCCccEEE
Q 019672 78 CLFNTTTGTALRELN-FLTSILAVRLNKKR--LV-IVL-REKTYIYDANTLAILDTID-TVPNLKGLCAFSPSLNACFLA 151 (337)
Q Consensus 78 ~iwd~~~~~~~~~~~-~~~~v~~i~~~~~~--~~-v~~-d~~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~la 151 (337)
++||++.. .+..+. +...|.+++|+++. ++ .+. |+.|++||+++.+....+. ...+...+.+++++|++.+|+
T Consensus 234 ~~wd~~~~-~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~ 312 (435)
T 4e54_B 234 ILLNMDGK-ELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLL 312 (435)
T ss_dssp EEEESSSC-BCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEE
T ss_pred eeeccCcc-eeEEEecccceEEeeeecCCCceEEEEecCcceeeEEecccccccceEEEeeeccccccceeECCCCCeeE
Confidence 99998754 444444 45689999998653 33 444 8999999998876544432 223445678888999999999
Q ss_pred EcCCCCccEEEEEEccCCccccc-----------CceEEEEeCCCCCEEEEEe-----------CCCcEEEEEEcCCCce
Q 019672 152 VPASTTKGSVLVYNVMELHSHCE-----------APLAAIVLSSNGMYIATAS-----------EQGTIIRVFLVSEATK 209 (337)
Q Consensus 152 ~~~~~~dg~v~i~d~~~~~~~~~-----------~~i~~~~~s~dg~~lat~s-----------~dg~~i~vwd~~~~~~ 209 (337)
+++ .||.|+|||+.++..... ..+..+.|+|++..+++++ .++..|++||..+|+.
T Consensus 313 s~~--~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~ 390 (435)
T 4e54_B 313 TTD--QKSEIRVYSASQWDCPLGLIPHPHRHFQHLTPIKAAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKM 390 (435)
T ss_dssp EEE--SSSCEEEEESSSSSSEEEECCCCCCCCSSSCCCBCEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCE
T ss_pred EEc--CCCEEEEEECCCCccceEEecccccccccceeEEEEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcE
Confidence 988 599999999987654311 2233456677666666654 2333479999999999
Q ss_pred eEeeccCCcceeEEEE-EeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 210 SYSFRRGTYPSTIFSL-SFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 210 ~~~~~~~~~~~~i~~l-~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
+..+..+ +...|.++ +|||+|+ +||+|+ |++|+||+++.++.
T Consensus 391 ~~~l~~~-~~~~v~s~~~fspdg~---~lasg~-d~~i~iW~~~~gk~ 433 (435)
T 4e54_B 391 MCQLYDP-ESSGISSLNEFNPMGD---TLASAM-GYHILIWSQQEART 433 (435)
T ss_dssp EEEECCS-SCCCCCCEEEECTTSS---CEEEEC-SSEEEECCCC----
T ss_pred EEEEeCC-CCCcEEEEEEECCCCC---EEEEEc-CCcEEEEECCcCee
Confidence 8887544 44567776 6999999 888876 78999999987653
No 107
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=7.5e-26 Score=205.08 Aligned_cols=238 Identities=10% Similarity=0.068 Sum_probs=175.7
Q ss_pred EEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC--EEEEEE-cCCceeEEEEcCCe--EEEEE-CCeE
Q 019672 42 YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT--ALRELN-FLTSILAVRLNKKR--LVIVL-REKT 115 (337)
Q Consensus 42 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~--~~~~~~-~~~~v~~i~~~~~~--~~v~~-d~~i 115 (337)
+..+...+..+.+.++.+.++..+ .|+.|++||+.+++ .+..+. +...|.++.|+++. ++++. |+.|
T Consensus 4 ~~~~~~~i~~~~~s~~~~~l~~~~-------~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i 76 (372)
T 1k8k_C 4 HSFLVEPISCHAWNKDRTQIAICP-------NNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNA 76 (372)
T ss_dssp EESCSSCCCEEEECTTSSEEEEEC-------SSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred ecccCCCeEEEEECCCCCEEEEEe-------CCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeE
Confidence 333445667777777777776654 38999999999887 677775 45689999998654 55555 8899
Q ss_pred EEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc---------cccCceEEEEeCCCC
Q 019672 116 YIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS---------HCEAPLAAIVLSSNG 186 (337)
Q Consensus 116 ~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~---------~~~~~i~~~~~s~dg 186 (337)
++||+.+++....+....+...+.++.++|++.++++++ .||.|++||+..... .|...|.+++|+|++
T Consensus 77 ~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~--~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 154 (372)
T 1k8k_C 77 YVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGS--GSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNS 154 (372)
T ss_dssp EEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEE--TTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTS
T ss_pred EEEECCCCeeeeeEEeecCCCceeEEEECCCCCEEEEEe--CCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCC
Confidence 999998887655554334455678888888999999988 589999999987652 134789999999999
Q ss_pred CEEEEEeCCCcEEEEEEc------------------CCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEE
Q 019672 187 MYIATASEQGTIIRVFLV------------------SEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHV 248 (337)
Q Consensus 187 ~~lat~s~dg~~i~vwd~------------------~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~i 248 (337)
++|++++.||. |++||+ ..++.+..+. .+...|.+++|+|+++ +|++++.||+|++
T Consensus 155 ~~l~~~~~dg~-i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~~~~~~~~~---~l~~~~~d~~i~i 228 (372)
T 1k8k_C 155 VLLAAGSCDFK-CRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS--SSCGWVHGVCFSANGS---RVAWVSHDSTVCL 228 (372)
T ss_dssp SEEEEEETTSC-EEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC--CCSSCEEEEEECSSSS---EEEEEETTTEEEE
T ss_pred CEEEEEcCCCC-EEEEEcccccccccccccccccccchhhheEecC--CCCCeEEEEEECCCCC---EEEEEeCCCEEEE
Confidence 99999999998 699995 3667777764 2456799999999999 9999999999999
Q ss_pred EecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEec
Q 019672 249 FSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 249 w~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~ 316 (337)
||+++.+.... + ......+ ..+.+.+++..++ ++.||.+++|+++.
T Consensus 229 ~d~~~~~~~~~-------~----~~~~~~v----------~~~~~~~~~~~l~-~~~d~~i~i~~~~~ 274 (372)
T 1k8k_C 229 ADADKKMAVAT-------L----ASETLPL----------LAVTFITESSLVA-AGHDCFPVLFTYDS 274 (372)
T ss_dssp EEGGGTTEEEE-------E----ECSSCCE----------EEEEEEETTEEEE-EETTSSCEEEEEET
T ss_pred EECCCCceeEE-------E----ccCCCCe----------EEEEEecCCCEEE-EEeCCeEEEEEccC
Confidence 99976543211 0 0000001 1122233434444 45999999999987
No 108
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.95 E-value=3.3e-24 Score=196.15 Aligned_cols=233 Identities=12% Similarity=0.090 Sum_probs=183.9
Q ss_pred CCCeEEEEEcCCCCEE-EEEcCCc-eEEEeCCCCcEEEEEee-CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC
Q 019672 7 SYPVFFVSFNQDNSGF-ALSTKDG-FKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~l-a~g~~~g-~~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~ 83 (337)
...+.+++|+|+|+++ ++++.++ +++||+.+++.+..... ..+..+++.++.+.+++++. .+++|++||+.
T Consensus 31 ~~~~~~~~~s~dg~~l~~~~~~d~~i~v~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~------~~~~v~v~d~~ 104 (391)
T 1l0q_A 31 GSNPMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIATVPAGSSPQGVAVSPDGKQVYVTNM------ASSTLSVIDTT 104 (391)
T ss_dssp SSSEEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEET------TTTEEEEEETT
T ss_pred CCCcceEEECCCCCEEEEECCCCCeEEEEECCCCeEEEEEECCCCccceEECCCCCEEEEEEC------CCCEEEEEECC
Confidence 3468999999999986 5665554 79999999988766543 35666677777777766654 47999999999
Q ss_pred CCCEEEEEEcCCceeEEEEcCCe--EEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCcc
Q 019672 84 TGTALRELNFLTSILAVRLNKKR--LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG 159 (337)
Q Consensus 84 ~~~~~~~~~~~~~v~~i~~~~~~--~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg 159 (337)
+++.+..+..+..+.++.++++. ++++. ++.|++||+.+++.+..+..+.. ...+.++|++..+++++. .++
T Consensus 105 ~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~---~~~~~~~~dg~~l~~~~~-~~~ 180 (391)
T 1l0q_A 105 SNTVAGTVKTGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRS---PKGIAVTPDGTKVYVANF-DSM 180 (391)
T ss_dssp TTEEEEEEECSSSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSS---EEEEEECTTSSEEEEEET-TTT
T ss_pred CCeEEEEEeCCCCcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCC---cceEEECCCCCEEEEEeC-CCC
Confidence 99999888888889999998764 43444 78999999999988888765433 456677778877754433 589
Q ss_pred EEEEEEccCCcccc----cCceEEEEeCCCCCEEEEEe---CCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCC
Q 019672 160 SVLVYNVMELHSHC----EAPLAAIVLSSNGMYIATAS---EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQ 232 (337)
Q Consensus 160 ~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~lat~s---~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~ 232 (337)
.|++||+.+++... ...+.+++|+|+|++|++++ .++. |++||+.+++.+..+..+ ..+.+++|+|||+
T Consensus 181 ~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~-v~~~d~~~~~~~~~~~~~---~~~~~~~~s~dg~ 256 (391)
T 1l0q_A 181 SISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTNVDKYFNT-VSMIDTGTNKITARIPVG---PDPAGIAVTPDGK 256 (391)
T ss_dssp EEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEEECSSCCE-EEEEETTTTEEEEEEECC---SSEEEEEECTTSS
T ss_pred EEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEecCcCCCc-EEEEECCCCeEEEEEecC---CCccEEEEccCCC
Confidence 99999998876543 26789999999999999988 5776 699999999988877543 2478999999998
Q ss_pred cccEE-EEEeCCCcEEEEecCCCcc
Q 019672 233 FQDIL-VATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 233 ~~~~l-as~s~dg~v~iw~l~~~~~ 256 (337)
+| ++++.|++|++||+++.+.
T Consensus 257 ---~l~~s~~~d~~v~v~d~~~~~~ 278 (391)
T 1l0q_A 257 ---KVYVALSFXNTVSVIDTATNTI 278 (391)
T ss_dssp ---EEEEEETTTTEEEEEETTTTEE
T ss_pred ---EEEEEcCCCCEEEEEECCCCcE
Confidence 66 6778999999999987543
No 109
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.95 E-value=5.9e-26 Score=204.91 Aligned_cols=219 Identities=9% Similarity=0.078 Sum_probs=160.5
Q ss_pred CCceEEEEECCCCCEEEEEEcCCceeEEEEcCCeEEEEE-CCeEEEEECC---------CCeeeeeecCCCCCceEEEEe
Q 019672 73 SPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL-REKTYIYDAN---------TLAILDTIDTVPNLKGLCAFS 142 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~-d~~i~i~d~~---------~~~~~~~~~~~~~~~~~~~~~ 142 (337)
.|++|++||+++++.+..+. ...|.++.+++. ++.+. |++|++|+.. +++.+..+.. .+...+.+++
T Consensus 56 ~Dg~v~iwd~~~~~~~~~~~-~~~v~~~~~~~~-~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~ 132 (343)
T 3lrv_A 56 EDGALHFTQLKDSKTITTIT-TPNPRTGGEHPA-IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEV-DSANEIIYMY 132 (343)
T ss_dssp ETTEEEEEEESSSSCEEEEE-EECCCTTCCCCS-EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEEC-CCSSCEEEEE
T ss_pred CCCcEEEEECCCCcEEEEEe-cCCceeeeeCCc-eEEecCCCeEEEEEccCceEEeecCCcceeEEeec-CCCCCEEEEE
Confidence 59999999999999888876 345777777887 44444 8899999665 4443444432 2234578888
Q ss_pred eCC--CccEEEEcCCCCccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCcee-Eee
Q 019672 143 PSL--NACFLAVPASTTKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKS-YSF 213 (337)
Q Consensus 143 ~~~--~~~~la~~~~~~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~-~~~ 213 (337)
++| ++.++++++ .||.|++||+.+++... ..+|++++|+|+|++||+|+.||. |+|||+++++.+ ..+
T Consensus 133 ~~~~~~~~~l~s~s--~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~-i~iwd~~~~~~~~~~~ 209 (343)
T 3lrv_A 133 GHNEVNTEYFIWAD--NRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGI-LDVYNLSSPDQASSRF 209 (343)
T ss_dssp CCC---CCEEEEEE--TTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSC-EEEEESSCTTSCCEEC
T ss_pred cCCCCCCCEEEEEe--CCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCE-EEEEECCCCCCCccEE
Confidence 888 889999888 59999999999877542 257999999999999999999998 699999999987 667
Q ss_pred ccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCC
Q 019672 214 RRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPA 293 (337)
Q Consensus 214 ~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~ 293 (337)
.. .|...|.+|+|+|+|. +|+++++ ++|+|||+++......... +.....+ +.. ..+.+
T Consensus 210 ~~-~h~~~v~~l~fs~~g~---~l~s~~~-~~v~iwd~~~~~~~~~~~~---~~~~~~~-----~~~--------~~~~~ 268 (343)
T 3lrv_A 210 PV-DEEAKIKEVKFADNGY---WMVVECD-QTVVCFDLRKDVGTLAYPT---YTIPEFK-----TGT--------VTYDI 268 (343)
T ss_dssp CC-CTTSCEEEEEECTTSS---EEEEEES-SBEEEEETTSSTTCBSSCC---CBC----------CC--------EEEEE
T ss_pred ec-cCCCCEEEEEEeCCCC---EEEEEeC-CeEEEEEcCCCCcceeecc---ccccccc-----ccc--------eEEEE
Confidence 53 2467899999999999 9999994 5999999987654322110 0000000 000 12334
Q ss_pred CcccCEEEEEEe-CCcEEEEEEecCC
Q 019672 294 GVKRASVSVITY-NGYFVEYIFSINN 318 (337)
Q Consensus 294 ~~~~~~l~~~~~-dg~~~~~~~~~~~ 318 (337)
.+++++|++++. |+.+++|+++...
T Consensus 269 ~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 269 DDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp CTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCCEEEEecCCCCcEEEEEEcccc
Confidence 556689999998 9999999996544
No 110
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.95 E-value=5.7e-25 Score=196.34 Aligned_cols=257 Identities=12% Similarity=0.082 Sum_probs=175.8
Q ss_pred eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC----EEEEEE-cCCceeEEEEcC----CeEEEEE-CCe
Q 019672 45 AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT----ALRELN-FLTSILAVRLNK----KRLVIVL-REK 114 (337)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~----~~~~~~-~~~~v~~i~~~~----~~~~v~~-d~~ 114 (337)
+...+..+.+.++.+.++.++ .|++|++||+.++. .+..+. +..+|.+++|++ +.++++. |+.
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~-------~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCS-------SDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEE-------TTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred cccceeEEEEcCCCCEEEEee-------CCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 445677777777777776655 48999999998764 444454 456899999976 3455555 889
Q ss_pred EEEEECCCC---------eeeeeecCCCCCceEEEEeeCCC--ccEEEEcCCCCccEEEEEEccCCccc-----------
Q 019672 115 TYIYDANTL---------AILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELHSH----------- 172 (337)
Q Consensus 115 i~i~d~~~~---------~~~~~~~~~~~~~~~~~~~~~~~--~~~la~~~~~~dg~v~i~d~~~~~~~----------- 172 (337)
|++||++++ +.+..+..+ ...+.++.++|+ +.++++++ .||.|++||+.+.+..
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~~~~~~~~~~~l~~~~--~dg~v~iwd~~~~~~~~~~~~~~~~~~ 158 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDS--KGSLYSVKFAPAHLGLKLACLG--NDGILRLYDALEPSDLRSWTLTSEMKV 158 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEE--TTCEEEEEECSSTTCTTCCEEEEEEES
T ss_pred EEEEecCCCcccccccCcceeeeeccc--CCceeEEEEcCCCCCcEEEEec--CCCcEEEecCCChHHhccccccccccc
Confidence 999999876 445555544 345777777777 88899887 5999999999876542
Q ss_pred -------ccCceEEEEeCCC---CCEEEEEeCCCcEEEEEEcCCCce--eEeeccCCcceeEEEEEeecCC----CcccE
Q 019672 173 -------CEAPLAAIVLSSN---GMYIATASEQGTIIRVFLVSEATK--SYSFRRGTYPSTIFSLSFGQSM----QFQDI 236 (337)
Q Consensus 173 -------~~~~i~~~~~s~d---g~~lat~s~dg~~i~vwd~~~~~~--~~~~~~~~~~~~i~~l~fs~dg----~~~~~ 236 (337)
+...+.+++|+|+ +.+|++++.|+. +.+|+...++. +..+. .+...|++++|+|++ + +
T Consensus 159 ~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~--~h~~~i~~~~~~p~~~~~~~---~ 232 (351)
T 3f3f_A 159 LSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQA-IIYQRGKDGKLHVAAKLP--GHKSLIRSISWAPSIGRWYQ---L 232 (351)
T ss_dssp CSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEE-EEEEECTTSCEEEEEECC--CCCSCEEEEEECCCSSCSSE---E
T ss_pred cccccCCcccceeEEEeccCCCCCcEEEEecCCCc-EEEEccCCCceeeeeecC--CCCcceeEEEECCCCCCcce---E
Confidence 2267999999997 999999999997 46777777765 33442 346689999999998 7 9
Q ss_pred EEEEeCCCcEEEEecCCCcccCCCCcccccc--------ccccc--------ccc---------eeecccccceeeeecc
Q 019672 237 LVATSSSGSLHVFSPGFAINQRRGGRTSSIL--------GSILP--------ESV---------NEVLDPADHHVLRNAF 291 (337)
Q Consensus 237 las~s~dg~v~iw~l~~~~~~~~~~~~~~~~--------~~~~~--------~~~---------~~~w~~~~~~~~~~~~ 291 (337)
|++++.||+|+|||+................ ..... ... ..+.....+...+..+
T Consensus 233 l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 312 (351)
T 3f3f_A 233 IATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSV 312 (351)
T ss_dssp EEEEETTSCEEEEEEEECC---------------------------------------CCSEEEEEEEEECTTSSCEEEE
T ss_pred EEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEE
Confidence 9999999999999998653322110000000 00000 000 0111111122234455
Q ss_pred CCCcccCEEEEEEeCCcEEEEEEecCC
Q 019672 292 PAGVKRASVSVITYNGYFVEYIFSINN 318 (337)
Q Consensus 292 ~~~~~~~~l~~~~~dg~~~~~~~~~~~ 318 (337)
.+.++++.|++++.||.+++|++...+
T Consensus 313 ~~s~~~~~l~s~~~dg~v~iw~~~~~~ 339 (351)
T 3f3f_A 313 SWNLTGTILSSAGDDGKVRLWKATYSN 339 (351)
T ss_dssp EECSSSCCEEEEETTSCEEEEEECTTS
T ss_pred EEcCCCCEEEEecCCCcEEEEecCcCc
Confidence 567788999999999999999997543
No 111
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.94 E-value=3.7e-24 Score=195.83 Aligned_cols=258 Identities=9% Similarity=0.069 Sum_probs=191.2
Q ss_pred CEEEEEcCCc-eEEEeCCCCcEEEEEee-CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCce
Q 019672 20 SGFALSTKDG-FKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSI 97 (337)
Q Consensus 20 ~~la~g~~~g-~~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v 97 (337)
..+++++.++ +++||+.+++.+..... ..+..+.+.++.+.+++.+. .|++|++||+.+++.+..+..+..+
T Consensus 3 ~l~vs~~~d~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~d~~i~v~d~~~~~~~~~~~~~~~v 76 (391)
T 1l0q_A 3 FAYIANSESDNISVIDVTSNKVTATIPVGSNPMGAVISPDGTKVYVANA------HSNDVSIIDTATNNVIATVPAGSSP 76 (391)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEEG------GGTEEEEEETTTTEEEEEEECSSSE
T ss_pred EEEEEcCCCCEEEEEECCCCeEEEEeecCCCcceEEECCCCCEEEEECC------CCCeEEEEECCCCeEEEEEECCCCc
Confidence 3467777666 69999999988776654 34556677777777655554 4899999999999999999888899
Q ss_pred eEEEEcCCe--EEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcccc
Q 019672 98 LAVRLNKKR--LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHC 173 (337)
Q Consensus 98 ~~i~~~~~~--~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~ 173 (337)
.++++++++ ++++. ++.|++||+.+++.+..+..+. .+.+++++|++..+++++. .++.|++||+.+++...
T Consensus 77 ~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~-~~~~v~~~d~~~~~~~~ 152 (391)
T 1l0q_A 77 QGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---SPLGLALSPDGKKLYVTNN-GDKTVSVINTVTKAVIN 152 (391)
T ss_dssp EEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---SEEEEEECTTSSEEEEEET-TTTEEEEEETTTTEEEE
T ss_pred cceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC---CcceEEECCCCCEEEEEeC-CCCEEEEEECCCCcEEE
Confidence 999998764 44555 5899999999998887776443 3567777888887744443 58999999998876543
Q ss_pred c----CceEEEEeCCCCCEE-EEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEe---CCCc
Q 019672 174 E----APLAAIVLSSNGMYI-ATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS---SSGS 245 (337)
Q Consensus 174 ~----~~i~~~~~s~dg~~l-at~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s---~dg~ 245 (337)
. ..+.+++|+|+|++| ++++.++. |++||+.+++.+..+.. ...+.+++|+|+|+ +|++++ .++.
T Consensus 153 ~~~~~~~~~~~~~~~dg~~l~~~~~~~~~-v~~~d~~~~~~~~~~~~---~~~~~~~~~~~~g~---~l~~~~~~~~~~~ 225 (391)
T 1l0q_A 153 TVSVGRSPKGIAVTPDGTKVYVANFDSMS-ISVIDTVTNSVIDTVKV---EAAPSGIAVNPEGT---KAYVTNVDKYFNT 225 (391)
T ss_dssp EEECCSSEEEEEECTTSSEEEEEETTTTE-EEEEETTTTEEEEEEEC---SSEEEEEEECTTSS---EEEEEEECSSCCE
T ss_pred EEecCCCcceEEECCCCCEEEEEeCCCCE-EEEEECCCCeEEEEEec---CCCccceEECCCCC---EEEEEecCcCCCc
Confidence 2 668999999999987 56677786 69999999988877643 34688999999999 888887 6899
Q ss_pred EEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEE-EEEeCCcEEEEEEec
Q 019672 246 LHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVS-VITYNGYFVEYIFSI 316 (337)
Q Consensus 246 v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~-~~~~dg~~~~~~~~~ 316 (337)
|++||+.+.+.... +.. ... ...+.+.+++++|+ +++.||.+++|++..
T Consensus 226 v~~~d~~~~~~~~~-------~~~--~~~-------------~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~ 275 (391)
T 1l0q_A 226 VSMIDTGTNKITAR-------IPV--GPD-------------PAGIAVTPDGKKVYVALSFXNTVSVIDTAT 275 (391)
T ss_dssp EEEEETTTTEEEEE-------EEC--CSS-------------EEEEEECTTSSEEEEEETTTTEEEEEETTT
T ss_pred EEEEECCCCeEEEE-------Eec--CCC-------------ccEEEEccCCCEEEEEcCCCCEEEEEECCC
Confidence 99999976543211 000 000 01122345557774 557799999998754
No 112
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=5.3e-25 Score=200.69 Aligned_cols=276 Identities=13% Similarity=0.076 Sum_probs=189.4
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCceEEEeCCCC---cE-EEEEeeC-------------------CEEEEEEccCCCEEEE
Q 019672 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTG---RL-CYERAVG-------------------AFSIVEMLYSSSLLAI 63 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~---~~-~~~~~~~-------------------~~~~~~~~~~~~~~~~ 63 (337)
..||++++|+|||++|++|+.+.- .+| ++ ++..... ...+.++.++.+.++.
T Consensus 14 g~PV~sv~fs~dg~~l~sGGg~~~-----~sGi~N~i~~w~~~~~~~~~~~~~~~~~~~~l~~~~~~v~s~~~~~~~~~~ 88 (365)
T 4h5i_A 14 GYPAYGAKFLNNDTLLVAGGGGEG-----NNGIPNKLTVLRVDPTKDTEKEQFHILSEFALEDNDDSPTAIDASKGIILV 88 (365)
T ss_dssp SSCEEEEEEEETTEEEEEEECCSS-----SSSCCEEEEEEEECTTSSSHHHHEEEEEEEECCTTSCCCCEEEEETTEEEE
T ss_pred CCCEEEEEEeCCCcEEEEECCCcc-----ccCCCCEEEEEEEcCCCcceeeeeeeeeEEEccCCCCceEEEEeCCCEEEE
Confidence 469999999999999999987642 233 22 3443211 0112234445554443
Q ss_pred EeCCCC-----CCCCCceEEEEECCCCCEEEE----EEc------CCceeEEEEcCCe--EEEEE---CCeEEEEECCCC
Q 019672 64 VGAGEQ-----PSLSPRRLCLFNTTTGTALRE----LNF------LTSILAVRLNKKR--LVIVL---REKTYIYDANTL 123 (337)
Q Consensus 64 ~~~g~~-----~~~~d~~v~iwd~~~~~~~~~----~~~------~~~v~~i~~~~~~--~~v~~---d~~i~i~d~~~~ 123 (337)
... .. ....|+++|+|++.+...... ... ...+..++|+|++ +++++ |+.|+|||++++
T Consensus 89 g~~-~~~~~l~s~~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~ 167 (365)
T 4h5i_A 89 GCN-ENSTKITQGKGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISREGTVAAIASSKVPAIMRIIDPSDL 167 (365)
T ss_dssp ECC-CCHHHHHHTSCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTTSSCEEEEESCSSCEEEEEETTTT
T ss_pred EEC-CCccEEEEecCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCC
Confidence 221 11 024588999999876543222 111 1247889998875 45555 689999999999
Q ss_pred eeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc-------ccCceEEEEeCCCCCEEEEEeCCC
Q 019672 124 AILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH-------CEAPLAAIVLSSNGMYIATASEQG 196 (337)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~-------~~~~i~~~~~s~dg~~lat~s~dg 196 (337)
+.+..+... ..+.+++++|++.++++++ ++.+.+|+..++... +...|.+++|+|+|+++++++.|+
T Consensus 168 ~~~~~~~~~---~~V~~v~fspdg~~l~s~s---~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~ 241 (365)
T 4h5i_A 168 TEKFEIETR---GEVKDLHFSTDGKVVAYIT---GSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKK 241 (365)
T ss_dssp EEEEEEECS---SCCCEEEECTTSSEEEEEC---SSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESS
T ss_pred cEEEEeCCC---CceEEEEEccCCceEEecc---ceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCC
Confidence 988887633 2466778888999999886 456777777666543 236799999999999999999887
Q ss_pred c---EEEEEEcCCCcee----EeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccc
Q 019672 197 T---IIRVFLVSEATKS----YSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGS 269 (337)
Q Consensus 197 ~---~i~vwd~~~~~~~----~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~ 269 (337)
. .+++||+..+... ..+. .+...|++|+|||||+ +||+|+.|++|+|||+++.+... .
T Consensus 242 ~~~~~i~~~~~~~~~~~~~~~~~~~--~~~~~V~~~~~Spdg~---~lasgs~D~~V~iwd~~~~~~~~----------~ 306 (365)
T 4h5i_A 242 GKGIVLTKISIKSGNTSVLRSKQVT--NRFKGITSMDVDMKGE---LAVLASNDNSIALVKLKDLSMSK----------I 306 (365)
T ss_dssp SCCEEEEEEEEETTEEEEEEEEEEE--SSCSCEEEEEECTTSC---EEEEEETTSCEEEEETTTTEEEE----------E
T ss_pred cceeEEeecccccceecceeeeeec--CCCCCeEeEEECCCCC---ceEEEcCCCEEEEEECCCCcEEE----------E
Confidence 3 4688998876542 2222 2345799999999999 99999999999999998765322 1
Q ss_pred cccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecCCC
Q 019672 270 ILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSINNC 319 (337)
Q Consensus 270 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~~~ 319 (337)
++.. |...+..+++.|++++|++++.||+|++|++..+-.
T Consensus 307 ~~~g----------H~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~~~~ 346 (365)
T 4h5i_A 307 FKQA----------HSFAITEVTISPDSTYVASVSAANTIHIIKLPLNYA 346 (365)
T ss_dssp ETTS----------SSSCEEEEEECTTSCEEEEEETTSEEEEEECCTTTT
T ss_pred ecCc----------ccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCCCCc
Confidence 1111 111233445577889999999999999999976543
No 113
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.94 E-value=8e-25 Score=203.50 Aligned_cols=248 Identities=15% Similarity=0.115 Sum_probs=168.4
Q ss_pred CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC-----------EEEEEEcC-------------CceeEEEE
Q 019672 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT-----------ALRELNFL-------------TSILAVRL 102 (337)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~-----------~~~~~~~~-------------~~v~~i~~ 102 (337)
..+..+++.++++.++..+. |+.|+|||+.+++ ....+..+ ..|.++.|
T Consensus 29 ~~V~~v~~s~~g~~la~g~~-------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~ 101 (447)
T 3dw8_B 29 DIISTVEFNHSGELLATGDK-------GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRW 101 (447)
T ss_dssp GSEEEEEECSSSSEEEEEET-------TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEE
T ss_pred CcEEEEEECCCCCEEEEEcC-------CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEE
Confidence 56777888887787776554 8999999998876 35555544 67999999
Q ss_pred cCCe----EEEEE-CCeEEEEECCCCeeee---------------------------------------eecCCCCCceE
Q 019672 103 NKKR----LVIVL-REKTYIYDANTLAILD---------------------------------------TIDTVPNLKGL 138 (337)
Q Consensus 103 ~~~~----~~v~~-d~~i~i~d~~~~~~~~---------------------------------------~~~~~~~~~~~ 138 (337)
+++. ++++. |+.|++||+.+++... .+ ...+...+
T Consensus 102 ~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~h~~~v 180 (447)
T 3dw8_B 102 LPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIF-ANAHTYHI 180 (447)
T ss_dssp CCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEE-CSCCSSCC
T ss_pred cCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEe-ccCCCcce
Confidence 8864 44444 8999999997643311 11 12234456
Q ss_pred EEEeeCCCccEEEEcCCCCccEEEEEEccCCc-c------------cccCceEEEEeCCCC-CEEEEEeCCCcEEEEEEc
Q 019672 139 CAFSPSLNACFLAVPASTTKGSVLVYNVMELH-S------------HCEAPLAAIVLSSNG-MYIATASEQGTIIRVFLV 204 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~-~------------~~~~~i~~~~~s~dg-~~lat~s~dg~~i~vwd~ 204 (337)
.+++++|++.+++++ . ||.|++||+.+.. . .|...|++++|+|+| ++|++|+.||+ |++||+
T Consensus 181 ~~~~~~~~~~~l~s~-~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~-i~iwd~ 256 (447)
T 3dw8_B 181 NSISINSDYETYLSA-D--DLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSKGT-IRLCDM 256 (447)
T ss_dssp CEEEECTTSSEEEEE-C--SSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETTSC-EEEEET
T ss_pred EEEEEcCCCCEEEEe-C--CCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCCCe-EEEEEC
Confidence 777888888899986 3 8999999998432 1 244789999999999 99999999998 699999
Q ss_pred CCCce----eEeeccCCc----------ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCccccccccc
Q 019672 205 SEATK----SYSFRRGTY----------PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSI 270 (337)
Q Consensus 205 ~~~~~----~~~~~~~~~----------~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~ 270 (337)
++++. +..+..+.. ...|.+++|+|+|+ +|++++. ++|+|||+.....+.............
T Consensus 257 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~---~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~ 332 (447)
T 3dw8_B 257 RASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR---YMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSK 332 (447)
T ss_dssp TTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS---EEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTT
T ss_pred cCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC---EEEEeeC-CeEEEEeCCCCccccceeecccccccc
Confidence 99886 566643211 02799999999999 9999999 999999998633221100000000000
Q ss_pred cccc--ceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 271 LPES--VNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 271 ~~~~--~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
+... ...++. ...+.+.+++++|++++.||.+++|++...
T Consensus 333 l~~~~~~~~i~~-------~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~ 374 (447)
T 3dw8_B 333 LCSLYENDCIFD-------KFECCWNGSDSVVMTGSYNNFFRMFDRNTK 374 (447)
T ss_dssp HHHHHHTSGGGC-------CCCEEECTTSSEEEEECSTTEEEEEETTTC
T ss_pred cccccccccccc-------ceEEEECCCCCEEEEeccCCEEEEEEcCCC
Confidence 0000 000000 001234566689999999999999987543
No 114
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.94 E-value=1.2e-26 Score=211.49 Aligned_cols=235 Identities=13% Similarity=0.134 Sum_probs=160.6
Q ss_pred CCCCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCc---EEEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 3 NQSSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGR---LCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 3 ~~~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~---~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
...+..+|++++|+|++++|++|+.++ +++||+.+++ ...... ...+..+.+.++.+.++..+ .|++
T Consensus 51 ~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~-------~d~~ 123 (377)
T 3dwl_C 51 FSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGS-------GARV 123 (377)
T ss_dssp BCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEE-------SSSC
T ss_pred EecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEe-------cCCe
Confidence 346888999999999999999998876 6999998876 344432 34455566666666666555 3899
Q ss_pred EEEEECCCCCE---EEEEE--cCCceeEEEEcCCe--EEEEE-CCeEEEEECCC------------------Ceeeeeec
Q 019672 77 LCLFNTTTGTA---LRELN--FLTSILAVRLNKKR--LVIVL-REKTYIYDANT------------------LAILDTID 130 (337)
Q Consensus 77 v~iwd~~~~~~---~~~~~--~~~~v~~i~~~~~~--~~v~~-d~~i~i~d~~~------------------~~~~~~~~ 130 (337)
|++||+++++. ...+. +...|.++.|+++. ++++. |+.|++||+.. ++.+..+
T Consensus 124 i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 202 (377)
T 3dwl_C 124 ISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY- 202 (377)
T ss_dssp EEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-
T ss_pred EEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcc-
Confidence 99999998873 55665 56689999998864 44444 88999999852 3344444
Q ss_pred CCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc----c-----ccCceEEEEeCCCCCEEEEEeCCCcEEEE
Q 019672 131 TVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS----H-----CEAPLAAIVLSSNGMYIATASEQGTIIRV 201 (337)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~----~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~v 201 (337)
.+...+.+++++|++.++++++ .||.|++||+.+++. . |..+|.+++|+|+|++|++|+.++. + +
T Consensus 203 --~~~~~v~~~~~sp~~~~l~~~~--~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~-~-~ 276 (377)
T 3dwl_C 203 --PSGGWVHAVGFSPSGNALAYAG--HDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSP-I-L 276 (377)
T ss_dssp --CCSSSEEEEEECTTSSCEEEEE--TTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSE-E-E
T ss_pred --cCCceEEEEEECCCCCEEEEEe--CCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcE-E-E
Confidence 3344677888888999999988 599999999998765 3 2378999999999999999987764 4 7
Q ss_pred EEcCCCc-e-eE----------------------------------eec--------------cCCcceeEEEEEeecCC
Q 019672 202 FLVSEAT-K-SY----------------------------------SFR--------------RGTYPSTIFSLSFGQSM 231 (337)
Q Consensus 202 wd~~~~~-~-~~----------------------------------~~~--------------~~~~~~~i~~l~fs~dg 231 (337)
|+...+. . .. .+. ...|...|++|++.++.
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~H~~~i~~~~~~~~~ 356 (377)
T 3dwl_C 277 LQGNESGWAHTRDLDAGTSKTSFTHTGNTGEGREEEGPVSFTALRSTFRNMDLKGSSQSISSLPTVHQNMIATLRPYAGT 356 (377)
T ss_dssp ECCCC---CCSBCCCSCCCCCCBSSSSSBCCCCCC-------------------------CCCSSSCSSCEEEEEEEEEE
T ss_pred EEeCCCceEEEeeecccccccccccccccccccccccccccccccccccchhhccccccccccCccccceeEEEeccCCC
Confidence 7665221 0 00 000 01145679999977655
Q ss_pred C-cccEEEEEeCCCcEEEEec
Q 019672 232 Q-FQDILVATSSSGSLHVFSP 251 (337)
Q Consensus 232 ~-~~~~las~s~dg~v~iw~l 251 (337)
. ....|++++.||+|+|||+
T Consensus 357 ~~~~~~~~s~g~Dg~i~iWdl 377 (377)
T 3dwl_C 357 PGNITAFTSSGTDGRVVLWTL 377 (377)
T ss_dssp TTEEEEEEEEETTSEEEEECC
T ss_pred CCceEEEEeecCCCcEEEecC
Confidence 3 0014999999999999986
No 115
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.94 E-value=1.1e-24 Score=202.11 Aligned_cols=269 Identities=10% Similarity=0.037 Sum_probs=194.3
Q ss_pred CCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEe-----eC--CEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 8 YPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA-----VG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
..+.+++|+|++.++++++.++ +++||+.+++...... .+ .+..+.+..+...++. ++ .|++|++
T Consensus 123 ~~~~~~~~s~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s-~~------~d~~v~~ 195 (433)
T 3bws_A 123 FQPKSVRFIDNTRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVS-QM------QANAVHV 195 (433)
T ss_dssp SCBCCCEESSSSEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEE-EG------GGTEEEE
T ss_pred CCceEEEEeCCCeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEE-EC------CCCEEEE
Confidence 4466899999777777777665 7999999998765321 12 3444555444444333 32 4899999
Q ss_pred EECCCCCEEEEEEc-CCceeEEEEcCCe--EEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcC
Q 019672 80 FNTTTGTALRELNF-LTSILAVRLNKKR--LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (337)
Q Consensus 80 wd~~~~~~~~~~~~-~~~v~~i~~~~~~--~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 154 (337)
||+++++.+..+.. ...+.++.++++. ++++. ++.|++||+++++.+..+..+ ..+.++.++|++.++++++
T Consensus 196 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 196 FDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKI---GLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp EETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCC---SEEEEEEECTTSSEEEEEE
T ss_pred EECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCC---CCceEEEEcCCCCEEEEEE
Confidence 99999999888864 4478999998754 54554 789999999999887777543 3466778888888887765
Q ss_pred CC------CccEEEEEEccCCcccc----cCceEEEEeCCCCCEE-EEEeCCCcEEEEEEcCCCceeEeeccCCcceeEE
Q 019672 155 ST------TKGSVLVYNVMELHSHC----EAPLAAIVLSSNGMYI-ATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIF 223 (337)
Q Consensus 155 ~~------~dg~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~l-at~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~ 223 (337)
.. .||.|++||+.+++... ...+.+++|+|+|+.+ ++++.|+. |++||+.+++.+..+.. ...+.
T Consensus 273 ~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~-v~v~d~~~~~~~~~~~~---~~~~~ 348 (433)
T 3bws_A 273 FSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVSDMCCSK-IEVYDLKEKKVQKSIPV---FDKPN 348 (433)
T ss_dssp EESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEEETTTTE-EEEEETTTTEEEEEEEC---SSSEE
T ss_pred CCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEEecCCCE-EEEEECCCCcEEEEecC---CCCCC
Confidence 21 27899999998876543 2678999999999755 66688887 69999999988877752 34588
Q ss_pred EEEeecCCCcccEEEEEeC---------------CCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeee
Q 019672 224 SLSFGQSMQFQDILVATSS---------------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLR 288 (337)
Q Consensus 224 ~l~fs~dg~~~~~las~s~---------------dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 288 (337)
+++|+|+|+ +|++++. ||.|++||+.+.+.... +.. ... .
T Consensus 349 ~~~~s~dg~---~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~-------~~~--~~~-------------~ 403 (433)
T 3bws_A 349 TIALSPDGK---YLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF-------WEA--GNQ-------------P 403 (433)
T ss_dssp EEEECTTSS---EEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE-------EEC--SSS-------------E
T ss_pred eEEEcCCCC---EEEEEecCCCccccccccccccceEEEEEECCCCcEEEE-------ecC--CCC-------------C
Confidence 999999999 8888877 57999999976543211 000 000 1
Q ss_pred eccCCCcccCEEEEEEe-CCcEEEEEEe
Q 019672 289 NAFPAGVKRASVSVITY-NGYFVEYIFS 315 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~-dg~~~~~~~~ 315 (337)
..+.+.++++.|++++. ||.+++|+++
T Consensus 404 ~~~~~s~dg~~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 404 TGLDVSPDNRYLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEEECTTSCEEEEEETTTTEEEEEEET
T ss_pred ceEEEcCCCCEEEEEECCCCeEEEEEec
Confidence 12233556688888875 9999999885
No 116
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=1.1e-25 Score=209.46 Aligned_cols=235 Identities=12% Similarity=0.107 Sum_probs=172.0
Q ss_pred CCCCCeEEEEEcCC-CCEEEEEcCCc-eEEEeCCC----------CcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCC
Q 019672 5 SSSYPVFFVSFNQD-NSGFALSTKDG-FKIFDSST----------GRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQP 70 (337)
Q Consensus 5 ~~~~~v~~~~fs~d-g~~la~g~~~g-~~vw~~~~----------~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~ 70 (337)
.+.++|++++|+|+ +.+||+|+.+| +++|++.+ .+.+..... ..+..+.+.+....++++++
T Consensus 126 ~h~~~v~~l~~~p~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~---- 201 (430)
T 2xyi_A 126 NHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSAS---- 201 (430)
T ss_dssp EESSCCSEEEEETTEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEEC----
T ss_pred cCCCcEEEEEECCCCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEe----
Confidence 46778999999998 67899998877 69999876 344444333 34455566655552333333
Q ss_pred CCCCceEEEEECCCCCE-------EEEE-EcCCceeEEEEcC-C--eEEEEE-CCeEEEEECCCC---eeeeeecCCCCC
Q 019672 71 SLSPRRLCLFNTTTGTA-------LREL-NFLTSILAVRLNK-K--RLVIVL-REKTYIYDANTL---AILDTIDTVPNL 135 (337)
Q Consensus 71 ~~~d~~v~iwd~~~~~~-------~~~~-~~~~~v~~i~~~~-~--~~~v~~-d~~i~i~d~~~~---~~~~~~~~~~~~ 135 (337)
.|++|++||+.++.. ...+ .+...|.++.|++ + .++++. ++.|++||++++ +.+..+..+ .
T Consensus 202 --~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~--~ 277 (430)
T 2xyi_A 202 --DDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAH--T 277 (430)
T ss_dssp --TTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEECC--S
T ss_pred --CCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEeecC--C
Confidence 599999999987432 2333 3455899999986 2 344444 899999999876 455555543 3
Q ss_pred ceEEEEeeCCCcc-EEEEcCCCCccEEEEEEccCCcc-c-----ccCceEEEEeCCCCC-EEEEEeCCCcEEEEEEcCC-
Q 019672 136 KGLCAFSPSLNAC-FLAVPASTTKGSVLVYNVMELHS-H-----CEAPLAAIVLSSNGM-YIATASEQGTIIRVFLVSE- 206 (337)
Q Consensus 136 ~~~~~~~~~~~~~-~la~~~~~~dg~v~i~d~~~~~~-~-----~~~~i~~~~~s~dg~-~lat~s~dg~~i~vwd~~~- 206 (337)
..+.+++++|++. ++++++ .||.|++||+++... . |..+|.+++|+|+++ +||+++.||+ |+|||+..
T Consensus 278 ~~v~~i~~~p~~~~~l~tg~--~dg~v~vwd~~~~~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~-i~iwd~~~~ 354 (430)
T 2xyi_A 278 AEVNCLSFNPYSEFILATGS--ADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRR-LHVWDLSKI 354 (430)
T ss_dssp SCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCTTSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSC-CEEEEGGGT
T ss_pred CCeEEEEeCCCCCCEEEEEe--CCCeEEEEeCCCCCCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCc-EEEEeCCCC
Confidence 4577788888776 577776 599999999987432 2 448999999999995 7999999998 69999987
Q ss_pred -------------CceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 207 -------------ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 207 -------------~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
.+.+..+. .+...|++++|+|+++. +|++++.||.|+||++...
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~--~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHG--GHTAKISDFSWNPNEPW--IICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECC--CCSSCEEEEEECSSSTT--EEEEEETTSEEEEEEECHH
T ss_pred ccccCccccccCCcceEEEcC--CCCCCceEEEECCCCCC--EEEEEECCCCEEEeEcccc
Confidence 24444442 34567999999999973 7999999999999998753
No 117
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.94 E-value=1.6e-24 Score=201.71 Aligned_cols=249 Identities=12% Similarity=0.151 Sum_probs=165.4
Q ss_pred CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC----------CCEEEEEEc-CCceeEEEEcCC---eEEEEE-
Q 019672 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT----------GTALRELNF-LTSILAVRLNKK---RLVIVL- 111 (337)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~----------~~~~~~~~~-~~~v~~i~~~~~---~~~v~~- 111 (337)
+.+..+.+.+....++.+++ .|+.|++||+.+ .+++..+.. ...|.++.|+++ .++++.
T Consensus 129 ~~v~~l~~~p~~~~~lat~~------~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s~~~ 202 (430)
T 2xyi_A 129 GEVNRARYMPQNACVIATKT------PSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLSASD 202 (430)
T ss_dssp SCCSEEEEETTEEEEEEEEC------SSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEEECT
T ss_pred CcEEEEEECCCCCcEEEEEC------CCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEEEeC
Confidence 44555565554222333333 489999999976 456666654 458999999875 344444
Q ss_pred CCeEEEEECCCCee-------eeeecCCCCCceEEEEeeCC-CccEEEEcCCCCccEEEEEEccCCc---c-----cccC
Q 019672 112 REKTYIYDANTLAI-------LDTIDTVPNLKGLCAFSPSL-NACFLAVPASTTKGSVLVYNVMELH---S-----HCEA 175 (337)
Q Consensus 112 d~~i~i~d~~~~~~-------~~~~~~~~~~~~~~~~~~~~-~~~~la~~~~~~dg~v~i~d~~~~~---~-----~~~~ 175 (337)
|+.|++||+..+.. ...+.. +...+.++.++| ++.++++++ .||.|++||+++.. . .|..
T Consensus 203 dg~i~vwd~~~~~~~~~~~~~~~~~~~--h~~~v~~v~~~p~~~~~l~s~~--~dg~i~i~d~~~~~~~~~~~~~~~~~~ 278 (430)
T 2xyi_A 203 DHTICLWDINATPKEHRVIDAKNIFTG--HTAVVEDVAWHLLHESLFGSVA--DDQKLMIWDTRNNNTSKPSHTVDAHTA 278 (430)
T ss_dssp TSCEEEEETTSCCBGGGEEECSEEECC--CSSCEEEEEECSSCTTEEEEEE--TTSEEEEEETTCSCSSSCSEEEECCSS
T ss_pred CCeEEEEeCCCCCCCCceeccceeecC--CCCCEeeeEEeCCCCCEEEEEe--CCCeEEEEECCCCCCCcceeEeecCCC
Confidence 88999999987322 223333 334566777777 566787777 59999999998763 2 2348
Q ss_pred ceEEEEeCCCCC-EEEEEeCCCcEEEEEEcCC-CceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 176 PLAAIVLSSNGM-YIATASEQGTIIRVFLVSE-ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 176 ~i~~~~~s~dg~-~lat~s~dg~~i~vwd~~~-~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
+|++++|+|++. +||+|+.||+ |++||+++ ++.+..+.. +...|.+++|+|+++ .+|++++.||+|+|||+..
T Consensus 279 ~v~~i~~~p~~~~~l~tg~~dg~-v~vwd~~~~~~~~~~~~~--h~~~v~~i~~sp~~~--~~l~s~~~d~~i~iwd~~~ 353 (430)
T 2xyi_A 279 EVNCLSFNPYSEFILATGSADKT-VALWDLRNLKLKLHSFES--HKDEIFQVQWSPHNE--TILASSGTDRRLHVWDLSK 353 (430)
T ss_dssp CEEEEEECSSCTTEEEEEETTSE-EEEEETTCTTSCSEEEEC--CSSCEEEEEECSSCT--TEEEEEETTSCCEEEEGGG
T ss_pred CeEEEEeCCCCCCEEEEEeCCCe-EEEEeCCCCCCCeEEeec--CCCCEEEEEECCCCC--CEEEEEeCCCcEEEEeCCC
Confidence 899999999987 7999999997 69999998 455666643 356799999999996 2799999999999999976
Q ss_pred CcccCCCCcccccccccccccceeecccccceeeeeccCCCcccC-EEEEEEeCCcEEEEEEecC
Q 019672 254 AINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRA-SVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~-~l~~~~~dg~~~~~~~~~~ 317 (337)
............ ..+. .+.....+...+..+.+.++++ .|++++.||.+++|+++..
T Consensus 354 ~~~~~~~~~~~~----~~~~---~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 354 IGEEQSTEDAED----GPPE---LLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp TTCCCCHHHHHH----CCTT---EEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred CccccCcccccc----CCcc---eEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 432211000000 0000 0000111111122333445556 7899999999999999654
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3.1e-26 Score=215.30 Aligned_cols=256 Identities=10% Similarity=0.018 Sum_probs=175.2
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCce-EEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 7 SYPVFFVSFNQDNSGFALSTKDGF-KIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~g~-~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
...|.+++|+|||+++|+++.|+. + |...++.+ ..+...+..+.+.+++ .++++.+|+.+..
T Consensus 15 ~~~v~sv~~SpDG~~iASas~D~TV~--d~~~~~~l-~gh~~~v~~V~FsPdg--------------~~~~~~~~~~~~~ 77 (588)
T 2j04_A 15 EDWKNNLTWARDGTLYLTTFPDISIG--QPKYAKDI-NCNSKNLFHVKEFPLE--------------FENKLDFELAQQN 77 (588)
T ss_dssp SSSSCCEEECTTSCEEEECSSSEEEE--EECCCSCC-SSBGGGTEEEEEECCC--------------CCCTTTTSCCCSS
T ss_pred hccEEEEEECCCCCEEEEEcCCceee--ccccccee-cCCCccEEEEEECCCC--------------CcceEEEEeCCCc
Confidence 356899999999999999999885 6 76555433 2223345555554433 1556666654432
Q ss_pred CEEEEEEcCCceeEEEEcCCeE--EEEE-CCeEEEEECCCCeeeeeecCCCC---CceEEEEeeCCCccEEEEcCCCCcc
Q 019672 86 TALRELNFLTSILAVRLNKKRL--VIVL-REKTYIYDANTLAILDTIDTVPN---LKGLCAFSPSLNACFLAVPASTTKG 159 (337)
Q Consensus 86 ~~~~~~~~~~~v~~i~~~~~~~--~v~~-d~~i~i~d~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~la~~~~~~dg 159 (337)
+ +.++.+...|.+++|+|++- ++++ |+.|++||... .+..+. +.. ...+.+++++|++.+||+++ .||
T Consensus 78 ~-~~~~~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs--~DG 151 (588)
T 2j04_A 78 G-LLNSQPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGN--EDG 151 (588)
T ss_dssp C-SSTTSCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEE--TTS
T ss_pred e-EeecCCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEc--CCC
Confidence 2 33334456899999998764 4444 89999999644 555554 322 23577889999999999998 599
Q ss_pred EEEEEEccCCcc----------------cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCce---eEeeccCCcce
Q 019672 160 SVLVYNVMELHS----------------HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK---SYSFRRGTYPS 220 (337)
Q Consensus 160 ~v~i~d~~~~~~----------------~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~---~~~~~~~~~~~ 220 (337)
+|+|||+.++.. .|...|.+++|+||| ||+++.|++ |++||+.+++. ..++..+ +..
T Consensus 152 tVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdg--Laass~D~t-VrlWd~~~~~~~~~~~tL~~~-h~~ 227 (588)
T 2j04_A 152 ELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDV--LVAALSNNS-VFSMTVSASSHQPVSRMIQNA-SRR 227 (588)
T ss_dssp EEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTE--EEEEETTCC-EEEECCCSSSSCCCEEEEECC-CSS
T ss_pred EEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCc--EEEEeCCCe-EEEEECCCCccccceeeeccc-ccC
Confidence 999999988742 123689999999999 888899998 69999988773 2345333 456
Q ss_pred eEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEE
Q 019672 221 TIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASV 300 (337)
Q Consensus 221 ~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l 300 (337)
.|.+++|+ |+ +||+++ +++|++||+........ . . .+...+++.+ ++..+++..|
T Consensus 228 ~V~svaFs--g~---~LASa~-~~tIkLWd~~~~~~~~~-------~---~-gh~~~V~~va--------~~~s~d~~~L 282 (588)
T 2j04_A 228 KITDLKIV--DY---KVVLTC-PGYVHKIDLKNYSISSL-------K---T-GSLENFHIIP--------LNHEKESTIL 282 (588)
T ss_dssp CCCCEEEE--TT---EEEEEC-SSEEEEEETTTTEEEEE-------E---C-SCCSCCCEEE--------ETTCSSCEEE
T ss_pred cEEEEEEE--CC---EEEEEe-CCeEEEEECCCCeEEEE-------E---c-CCCceEEEEE--------eeeCCCCCEE
Confidence 79999999 57 899998 69999999876543110 0 0 0111122211 1114555678
Q ss_pred EEEEeCCcEEEEEEe
Q 019672 301 SVITYNGYFVEYIFS 315 (337)
Q Consensus 301 ~~~~~dg~~~~~~~~ 315 (337)
+++..||+ ++|.++
T Consensus 283 a~a~edG~-klw~~d 296 (588)
T 2j04_A 283 LMSNKTSY-KVLLED 296 (588)
T ss_dssp EECSSCEE-EEEESS
T ss_pred EEEcCCCC-EEEeec
Confidence 88888999 888875
No 119
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4.4e-24 Score=199.75 Aligned_cols=250 Identities=12% Similarity=0.074 Sum_probs=176.5
Q ss_pred CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC---EEEEEEcC-----------------------------
Q 019672 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT---ALRELNFL----------------------------- 94 (337)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~---~~~~~~~~----------------------------- 94 (337)
+++..+.+.+++++++.. . ++.|++||+.+|+ .+..+..+
T Consensus 5 ~p~~~v~~s~dg~~l~~~-~-------~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (450)
T 2vdu_B 5 HPLQNLLTSRDGSLVFAI-I-------KNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKL 76 (450)
T ss_dssp CCCCEEEECSSSSEEEEE-E-------TTEEEEEEEETTTEEEEEEEEECCC----------------------------
T ss_pred ccEEEEEecCCCCEEEEE-e-------CCeEEEEECCCCCcceeeeecCCccccccccccccchhhcccccccccccccc
Confidence 455667777777744433 2 5799999999998 65555422
Q ss_pred --------------------------CceeEEEEcCCeEE--EEE--CCeEEEEECC--CCeeeeeecCCCCCceEEEEe
Q 019672 95 --------------------------TSILAVRLNKKRLV--IVL--REKTYIYDAN--TLAILDTIDTVPNLKGLCAFS 142 (337)
Q Consensus 95 --------------------------~~v~~i~~~~~~~~--v~~--d~~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~ 142 (337)
..|.+++|+++.-. ++. |+.|++||+. +++.+..+..+..+..+.+++
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~ 156 (450)
T 2vdu_B 77 KSNKGDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAIS 156 (450)
T ss_dssp -----------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEE
T ss_pred ccCcCccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEE
Confidence 15899999887532 333 8999999998 787777775444455688889
Q ss_pred eCCCccEEEEcCCCCccEEEEEEccCCccc---------ccCceEEEEeCCC---CCEEEEEeCCCcEEEEEEcCCCcee
Q 019672 143 PSLNACFLAVPASTTKGSVLVYNVMELHSH---------CEAPLAAIVLSSN---GMYIATASEQGTIIRVFLVSEATKS 210 (337)
Q Consensus 143 ~~~~~~~la~~~~~~dg~v~i~d~~~~~~~---------~~~~i~~~~~s~d---g~~lat~s~dg~~i~vwd~~~~~~~ 210 (337)
++|++.+|++++ .+|.|.+||+.+.... |..+|++++|+|+ +++|++|+.|++ |++||+.+++.+
T Consensus 157 ~sp~~~~l~~~~--~~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~d~~-i~vwd~~~~~~~ 233 (450)
T 2vdu_B 157 IAEDDTTVIIAD--KFGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIITSDRDEH-IKISHYPQCFIV 233 (450)
T ss_dssp ECTTSSEEEEEE--TTSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEEEETTSC-EEEEEESCTTCE
T ss_pred EcCCCCEEEEEe--CCCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEEEcCCCc-EEEEECCCCcee
Confidence 999999999987 4899999998776533 3488999999999 999999999998 699999999988
Q ss_pred EeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCccc---cccc--ccccccce-eecccccc
Q 019672 211 YSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTS---SILG--SILPESVN-EVLDPADH 284 (337)
Q Consensus 211 ~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~---~~~~--~~~~~~~~-~~w~~~~~ 284 (337)
..+..+ +...|.+++|+ +++ +|++++.|++|+|||+.+++......... .+.. ...|..+. .... ..
T Consensus 234 ~~~~~~-h~~~v~~~~~s-d~~---~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~ 306 (450)
T 2vdu_B 234 DKWLFG-HKHFVSSICCG-KDY---LLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENND--II 306 (450)
T ss_dssp EEECCC-CSSCEEEEEEC-STT---EEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTSBC------------CB
T ss_pred eeeecC-CCCceEEEEEC-CCC---EEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcccccccccccccc--cc
Confidence 775444 45679999999 999 99999999999999998765422110000 0000 00000000 0000 00
Q ss_pred eeeeeccCCCcccCEEEEEE-eCCcEEEEEE
Q 019672 285 HVLRNAFPAGVKRASVSVIT-YNGYFVEYIF 314 (337)
Q Consensus 285 ~~~~~~~~~~~~~~~l~~~~-~dg~~~~~~~ 314 (337)
...+..+.+.++++.|++++ .||.+++|++
T Consensus 307 ~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 307 EFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp CCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred eEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 01122333456678999999 8999999999
No 120
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.93 E-value=1.6e-23 Score=194.18 Aligned_cols=231 Identities=15% Similarity=0.109 Sum_probs=182.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
.+...|++++|+|+++++++++.++ +++||+++++.+..... ..+..+.+.++.+.+++++. .|+.|++||
T Consensus 167 ~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~i~~~d 240 (433)
T 3bws_A 167 KKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNW------ISEDISVID 240 (433)
T ss_dssp TTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEET------TTTEEEEEE
T ss_pred ccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEec------CCCcEEEEE
Confidence 4667899999999999999998766 69999999887766543 44666777777777766654 489999999
Q ss_pred CCCCCEEEEEEcCCceeEEEEcCCe--EEEEE---------CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEE
Q 019672 82 TTTGTALRELNFLTSILAVRLNKKR--LVIVL---------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~---------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (337)
+++++.+..+..+..+.++.++++. ++++. |+.|++||+.+++.+..+... .....++++|++..+
T Consensus 241 ~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~---~~~~~~~~~~~g~~l 317 (433)
T 3bws_A 241 RKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPP---GNKRHIVSGNTENKI 317 (433)
T ss_dssp TTTTEEEEECCCCSEEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEE---ECEEEEEECSSTTEE
T ss_pred CCCCcEEEEecCCCCceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCC---CCcceEEECCCCCEE
Confidence 9999988888877789999998764 55544 468999999998877666322 234566677777655
Q ss_pred EEcCCCCccEEEEEEccCCcccc----cCceEEEEeCCCCCEEEEEeC---------------CCcEEEEEEcCCCceeE
Q 019672 151 AVPASTTKGSVLVYNVMELHSHC----EAPLAAIVLSSNGMYIATASE---------------QGTIIRVFLVSEATKSY 211 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~lat~s~---------------dg~~i~vwd~~~~~~~~ 211 (337)
++++. .++.|++||+.+++... ...+.+++|+|+|++|++++. ||. |++||+.+++.+.
T Consensus 318 ~~~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~-v~~~d~~~~~~~~ 395 (433)
T 3bws_A 318 YVSDM-CCSKIEVYDLKEKKVQKSIPVFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGK-VYVIDTTTDTVKE 395 (433)
T ss_dssp EEEET-TTTEEEEEETTTTEEEEEEECSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCE-EEEEETTTTEEEE
T ss_pred EEEec-CCCEEEEEECCCCcEEEEecCCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceE-EEEEECCCCcEEE
Confidence 44433 58999999999876543 277999999999999998887 466 6999999999888
Q ss_pred eeccCCcceeEEEEEeecCCCcccEEEEEeC-CCcEEEEecC
Q 019672 212 SFRRGTYPSTIFSLSFGQSMQFQDILVATSS-SGSLHVFSPG 252 (337)
Q Consensus 212 ~~~~~~~~~~i~~l~fs~dg~~~~~las~s~-dg~v~iw~l~ 252 (337)
.+.. ...+.+++|+|||+ +|++++. |++|+||+++
T Consensus 396 ~~~~---~~~~~~~~~s~dg~---~l~~~~~~d~~i~v~~~~ 431 (433)
T 3bws_A 396 FWEA---GNQPTGLDVSPDNR---YLVISDFLDHQIRVYRRD 431 (433)
T ss_dssp EEEC---SSSEEEEEECTTSC---EEEEEETTTTEEEEEEET
T ss_pred EecC---CCCCceEEEcCCCC---EEEEEECCCCeEEEEEec
Confidence 7753 23589999999999 8887764 9999999986
No 121
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.9e-24 Score=214.94 Aligned_cols=239 Identities=9% Similarity=0.051 Sum_probs=171.2
Q ss_pred eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC--CCCEEEEEE-cCCceeEEEEcCC----eEEEEE-CCeEE
Q 019672 45 AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTALRELN-FLTSILAVRLNKK----RLVIVL-REKTY 116 (337)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~--~~~~~~~~~-~~~~v~~i~~~~~----~~~v~~-d~~i~ 116 (337)
+.+.+..+.+.++++.++.++ .|++|++||+. +++.+..+. +..+|.++.|+++ .++++. |+.|+
T Consensus 8 H~~~V~~l~~s~dg~~latg~-------~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCS-------SDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEE-------TTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred CcceeEEEEECCCCCeEEEEE-------CCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 334555555555666665554 48999999998 445555665 4458999999743 455555 89999
Q ss_pred EEECCCCe--eeeeecCCCCCceEEEEeeCCC--ccEEEEcCCCCccEEEEEEccCCccc-------ccCceEEEEeCC-
Q 019672 117 IYDANTLA--ILDTIDTVPNLKGLCAFSPSLN--ACFLAVPASTTKGSVLVYNVMELHSH-------CEAPLAAIVLSS- 184 (337)
Q Consensus 117 i~d~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~la~~~~~~dg~v~i~d~~~~~~~-------~~~~i~~~~~s~- 184 (337)
+||+.+++ .+..+..+ ...+.++.++|+ +.++++++ .||.|++||+.+.... +..+|.+++|+|
T Consensus 81 vwd~~~~~~~~~~~~~~h--~~~V~~v~~sp~~~~~~l~sgs--~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p~ 156 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVH--SASVNSVQWAPHEYGPLLLVAS--SDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (753)
T ss_dssp EEEEETTEEEEEEEECCC--SSCEEEEEECCGGGCSEEEEEE--TTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECCC
T ss_pred EEECCCCcccccccccCC--CCCeEEEEECCCCCCCEEEEEe--CCCcEEEEEeecCCCcceeEeecCCCceEEEEecCc
Confidence 99999886 44555443 345777777777 78899888 5999999999876322 348899999999
Q ss_pred ------------CCCEEEEEeCCCcEEEEEEcCCCc----eeEeeccCCcceeEEEEEeecC---CCcccEEEEEeCCCc
Q 019672 185 ------------NGMYIATASEQGTIIRVFLVSEAT----KSYSFRRGTYPSTIFSLSFGQS---MQFQDILVATSSSGS 245 (337)
Q Consensus 185 ------------dg~~lat~s~dg~~i~vwd~~~~~----~~~~~~~~~~~~~i~~l~fs~d---g~~~~~las~s~dg~ 245 (337)
++++|++|+.||+ |++||++++. .+..+. .|...|++++|+|+ ++ +|++++.||+
T Consensus 157 ~~~~~~~~~~~~d~~~l~sgs~dg~-I~iwd~~~~~~~~~~~~~~~--~h~~~V~~l~~sp~~~~~~---~l~s~s~Dg~ 230 (753)
T 3jro_A 157 TIEEDGEHNGTKESRKFVTGGADNL-VKIWKYNSDAQTYVLESTLE--GHSDWVRDVAWSPTVLLRS---YLASVSQDRT 230 (753)
T ss_dssp C---------CGGGCCEEEEETTSC-EEEEEEETTTTEEEEEEEEC--CCSSCEEEEEECCCCSSSE---EEEEEESSSC
T ss_pred ccccccccccCCCCCEEEEEECCCe-EEEEeccCCcccceeeeeec--CCCCcEEEEEeccCCCCCC---EEEEEecCCE
Confidence 5999999999998 6999998874 334443 34567999999999 78 9999999999
Q ss_pred EEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEec
Q 019672 246 LHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 246 v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~ 316 (337)
|+|||+.......... .. ........+ ..+.+.++++.+++++.||.+++|++++
T Consensus 231 I~iwd~~~~~~~~~~~-----~~-~~~~~~~~v----------~~l~~spdg~~l~s~s~Dg~I~vwd~~~ 285 (753)
T 3jro_A 231 CIIWTQDNEQGPWKKT-----LL-KEEKFPDVL----------WRASWSLSGNVLALSGGDNKVTLWKENL 285 (753)
T ss_dssp EEEEEESSSSSCCBCC-----BS-SSSCCSSCC----------CCEEECTTTCCEEEECSSSCEECCBCCS
T ss_pred EEEecCCCCCCcceeE-----Ee-ccCCCCCce----------EEEEEcCCCCEEEEEcCCCEEEEEecCC
Confidence 9999998764321100 00 000000111 1223355668999999999999999874
No 122
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.93 E-value=6.7e-24 Score=192.60 Aligned_cols=229 Identities=11% Similarity=0.063 Sum_probs=168.0
Q ss_pred CeEEEEEcCCCCEEE-EEcCC-ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC-
Q 019672 9 PVFFVSFNQDNSGFA-LSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG- 85 (337)
Q Consensus 9 ~v~~~~fs~dg~~la-~g~~~-g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~- 85 (337)
.+..+++.++++.++ +|+.+ .+++||..+++.+....... .+..+.++.+.++++. |++|++||+.++
T Consensus 60 ~~~~~~~~~~~~~~~~~~~~d~~v~iWd~~~~~~~~~~~~~~-~v~~v~~~~~~~~~~~--------~~~i~i~d~~~~~ 130 (355)
T 3vu4_A 60 HLSKVRMLHRTNYVAFVTGVKEVVHIWDDVKKQDVSRIKVDA-PVKDLFLSREFIVVSY--------GDVISVFKFGNPW 130 (355)
T ss_dssp CCCEEEECTTSSEEEEECSSTTEEEEEETTTTEEEEEEECSS-CEEEEEECSSEEEEEE--------TTEEEEEESSTTC
T ss_pred CeEEEEEcCCCCEEEEEECCccEEEEEECCCCcEEEEEECCC-ceEEEEEcCCEEEEEE--------cCEEEEEECCCCc
Confidence 477888999988875 45554 57999999998887765432 4455666777766553 679999999988
Q ss_pred CEEEEEEcCCceeEEEEcCCeEEEE-E--CCeEEEEECCCCe---------------e-eeeecCCCCCceEEEEeeCCC
Q 019672 86 TALRELNFLTSILAVRLNKKRLVIV-L--REKTYIYDANTLA---------------I-LDTIDTVPNLKGLCAFSPSLN 146 (337)
Q Consensus 86 ~~~~~~~~~~~v~~i~~~~~~~~v~-~--d~~i~i~d~~~~~---------------~-~~~~~~~~~~~~~~~~~~~~~ 146 (337)
+.+..+.. +...+.++++.++++ + ++.|++||+++++ + +..+..| ...+.+++++|+
T Consensus 131 ~~~~~~~~--~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h--~~~v~~~~~s~~ 206 (355)
T 3vu4_A 131 KRITDDIR--FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAH--TNPIKMVRLNRK 206 (355)
T ss_dssp CBSSCCEE--EEEEEEEETTEEEEEESSCTTCEEEEECCC------------------CCEEECCC--SSCEEEEEECTT
T ss_pred eeeEEecc--CCceEEEEccEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEEcc--CCceEEEEECCC
Confidence 66555444 333445566777776 2 7899999998765 1 4555544 346778888889
Q ss_pred ccEEEEcCCCCccE-EEEEEccCCccc-------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeE--eecc-
Q 019672 147 ACFLAVPASTTKGS-VLVYNVMELHSH-------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY--SFRR- 215 (337)
Q Consensus 147 ~~~la~~~~~~dg~-v~i~d~~~~~~~-------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~--~~~~- 215 (337)
+.+||+++ .||+ |++||+.+++.. |..+|++++|+|||++||+++.||+ |+|||+.++.... .+..
T Consensus 207 g~~l~s~s--~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~-v~iw~~~~~~~~~~~~~~~~ 283 (355)
T 3vu4_A 207 SDMVATCS--QDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWT-LHVFEIFNDQDNKRHALKGW 283 (355)
T ss_dssp SSEEEEEE--TTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCE-EEEEESSCCSCCCSEETTTT
T ss_pred CCEEEEEe--CCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCE-EEEEEccCCCCcccccccce
Confidence 99999998 5998 999999987642 4578999999999999999999998 6999997664211 1100
Q ss_pred ------------------CCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 216 ------------------GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 216 ------------------~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
.........++|+|||+ +|++++.||.+++|++....+
T Consensus 284 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~---~l~~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 284 INMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESS---LVVVWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp EECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSE---EEEEETTTTEEEEEEEEEETT
T ss_pred eeccccccccceeEEEeccCCCCCceEEEEeCCCC---EEEEEeCCCeEEEEEEEcCCC
Confidence 00111236689999999 999999999999999876543
No 123
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.92 E-value=2.9e-23 Score=184.06 Aligned_cols=212 Identities=10% Similarity=0.080 Sum_probs=139.1
Q ss_pred CceEEEEECCCC---CEEEEEEcCC-ceeEE-------------------------EEcCC----eEEEEE---------
Q 019672 74 PRRLCLFNTTTG---TALRELNFLT-SILAV-------------------------RLNKK----RLVIVL--------- 111 (337)
Q Consensus 74 d~~v~iwd~~~~---~~~~~~~~~~-~v~~i-------------------------~~~~~----~~~v~~--------- 111 (337)
..+|++|+...+ +.+.++.+++ +|..| +++++ +..++.
T Consensus 62 ~~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla~spd~~~~~~~l~s~g~~~~v~~ 141 (356)
T 2w18_A 62 EDVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALFCSSDDESEKQVLLKSGNIKAVLG 141 (356)
T ss_dssp SSEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEECC------CCEEEEEEEEEEEEEE
T ss_pred cceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEEECCCccccccEEEeCCCeEEEEe
Confidence 689999999998 6777777665 44444 44444 222221
Q ss_pred --------------CCeEEEEEC-CCCeeeeeecCCCCCceEEEEee-CCCccEEEEcCCCCccEEEEEEccCCccccc-
Q 019672 112 --------------REKTYIYDA-NTLAILDTIDTVPNLKGLCAFSP-SLNACFLAVPASTTKGSVLVYNVMELHSHCE- 174 (337)
Q Consensus 112 --------------d~~i~i~d~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~- 174 (337)
|+.|++|++ .+++.+..+..+.....++++++ .+++.+|++++ .|++|+|||+.+++..++
T Consensus 142 l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS--~D~TIkIWDl~TGk~l~tL 219 (356)
T 2w18_A 142 LTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTT--IMNNIVIWNLKTGQLLKKM 219 (356)
T ss_dssp ETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEE--TTSEEEEEETTTCCEEEEE
T ss_pred cCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEec--CCCcEEEEECCCCcEEEEE
Confidence 445666666 33544444444444455666666 55677888887 599999999999886543
Q ss_pred -------CceEEEEeCCCCCEE------------EEEeCCCcEEEEEEcCCCceeEeec----cCCcceeEEEEEeecCC
Q 019672 175 -------APLAAIVLSSNGMYI------------ATASEQGTIIRVFLVSEATKSYSFR----RGTYPSTIFSLSFGQSM 231 (337)
Q Consensus 175 -------~~i~~~~~s~dg~~l------------at~s~dg~~i~vwd~~~~~~~~~~~----~~~~~~~i~~l~fs~dg 231 (337)
..+.+++|+|||+++ ++|+.|++ |++||..+++.+..+. .++ ...+.+..++ +
T Consensus 220 ~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~t-IklWd~~tgk~l~v~~~~~p~Gh-~~~~lsg~~s--g 295 (356)
T 2w18_A 220 HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQ-LIVINPKTTLSVGVMLYCLPPGQ-AGRFLEGDVK--D 295 (356)
T ss_dssp ECCC---CCCEEEEEEETTEEEEEEC------------CCEE-EEEEETTTTEEEEEEEECCCTTC-CCCEEEEEEE--T
T ss_pred cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcE-EEEEECCCCEEEEEEEeeccCCC-cceeEccccC--C
Confidence 357888999999987 66888887 6999999998876542 232 2234444444 7
Q ss_pred CcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEE
Q 019672 232 QFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVE 311 (337)
Q Consensus 232 ~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~ 311 (337)
. ++|+++.|++|+|||+.+++.... +......++. .+++.|++++|++|+.||+|++
T Consensus 296 ~---~lASgS~DgTIkIWDl~tGk~l~t-----------L~gH~~~vvs---------~vafSPDG~~LaSGS~D~TIkl 352 (356)
T 2w18_A 296 H---CAAAILTSGTIAIWDLLLGQCTAL-----------LPPVSDQHWS---------FVKWSGTDSHLLAGQKDGNIFV 352 (356)
T ss_dssp T---EEEEEETTSCEEEEETTTCSEEEE-----------ECCC--CCCC---------EEEECSSSSEEEEECTTSCEEE
T ss_pred C---EEEEEcCCCcEEEEECCCCcEEEE-----------ecCCCCCeEE---------EEEECCCCCEEEEEECCCcEEE
Confidence 7 999999999999999987754321 1111001111 1234667799999999999999
Q ss_pred EEE
Q 019672 312 YIF 314 (337)
Q Consensus 312 ~~~ 314 (337)
|++
T Consensus 353 Wd~ 355 (356)
T 2w18_A 353 YHY 355 (356)
T ss_dssp EEE
T ss_pred ecC
Confidence 986
No 124
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=1.2e-23 Score=193.61 Aligned_cols=225 Identities=11% Similarity=0.080 Sum_probs=142.9
Q ss_pred EEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEE-------eeCCEEEEEEcc--------CCCEEEEEeCCCCCCCCCc
Q 019672 12 FVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYER-------AVGAFSIVEMLY--------SSSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 12 ~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~-------~~~~~~~~~~~~--------~~~~~~~~~~g~~~~~~d~ 75 (337)
...+.+++.+||+|+.|+ ++|||+.+++..... +...+..+++.+ +...++.++ .|+
T Consensus 94 ~~~~~~~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s-------~D~ 166 (393)
T 4gq1_A 94 VNSSPVYSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVG-------DDC 166 (393)
T ss_dssp ---CCEEEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEE-------TTS
T ss_pred eeecCCCCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEE-------CCC
Confidence 334455667789888776 799999888654321 223455555543 223444433 599
Q ss_pred eEEEEECCCCCEEE-EEEcCCceeEEEEcCCe---EEEEE-CCeEEEEECCCCeeeeeecCC------------------
Q 019672 76 RLCLFNTTTGTALR-ELNFLTSILAVRLNKKR---LVIVL-REKTYIYDANTLAILDTIDTV------------------ 132 (337)
Q Consensus 76 ~v~iwd~~~~~~~~-~~~~~~~v~~i~~~~~~---~~v~~-d~~i~i~d~~~~~~~~~~~~~------------------ 132 (337)
+|+|||++++.++. .+.++.+|.+++|+|+. ++++. |++|++||+++++........
T Consensus 167 tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~ 246 (393)
T 4gq1_A 167 TLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVN 246 (393)
T ss_dssp EEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-
T ss_pred eEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEeccccccee
Confidence 99999998776654 45677899999999864 33333 899999999887554332111
Q ss_pred -----CCCceEEEEee-CCCccEEEEcCCCCccEEEEEEccCCccccc-----Cce------------------EEEEeC
Q 019672 133 -----PNLKGLCAFSP-SLNACFLAVPASTTKGSVLVYNVMELHSHCE-----APL------------------AAIVLS 183 (337)
Q Consensus 133 -----~~~~~~~~~~~-~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~-----~~i------------------~~~~~s 183 (337)
.+...+.++.+ .+++..+++++ .|+++++||+...+.... ..+ ....++
T Consensus 247 ~~~~~~~~~~v~~v~~~~~dg~~l~s~s--~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 324 (393)
T 4gq1_A 247 TCHSSGIASSLANVRWIGSDGSGILAMC--KSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPH 324 (393)
T ss_dssp -----CCSSSCSEEEEETTTTCEEEEEC--TTSEEEEEEC-------------------CCSCSEEEECSSCCSSCCEEC
T ss_pred eeecccccccceeeeeecCCCCEEEEEe--CCCCEEEEECccCCCCceEeeecCccccEEEccccccccccCcceeEEEc
Confidence 01112223333 36778888887 599999999976543211 112 222333
Q ss_pred C--CCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 184 S--NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 184 ~--dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
| ++.++++|+.||+ |+|||+.+++.+..+.. +..+|.+|+|||||+ +||+++++| +.+|.+.
T Consensus 325 ~~~~~~~~~sgs~Dg~-V~lwd~~~~~~~~~~~~--~~~~V~svafspdG~---~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 325 PRYMDYFATAHSQHGL-IQLINTYEKDSNSIPIQ--LGMPIVDFCWHQDGS---HLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SSCTTEEEEEETTTTE-EEEEETTCTTCCEEEEE--CSSCEEEEEECTTSS---EEEEEESSE-EEEEEEG
T ss_pred cCCCCEEEEEECCCCE-EEEEECCCCcEEEEecC--CCCcEEEEEEcCCCC---EEEEEeCCC-eEEEEEe
Confidence 3 4457788889997 69999999988776643 245799999999999 999999776 6666653
No 125
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=4e-23 Score=190.06 Aligned_cols=210 Identities=10% Similarity=-0.010 Sum_probs=133.1
Q ss_pred CCceEEEEECCCCCEEEEE------EcCCceeEEEEcC--------Ce--EEEEE-CCeEEEEECCCCeeeeeecCCCCC
Q 019672 73 SPRRLCLFNTTTGTALREL------NFLTSILAVRLNK--------KR--LVIVL-REKTYIYDANTLAILDTIDTVPNL 135 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~------~~~~~v~~i~~~~--------~~--~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~ 135 (337)
.|++|+|||.++++..... .|...|.+++|+| +. ++.++ |++|+|||++++..+..+..+..
T Consensus 109 ~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~~~~- 187 (393)
T 4gq1_A 109 QDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYPLSS- 187 (393)
T ss_dssp TTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEECSS-
T ss_pred CCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecCCCC-
Confidence 5999999999988765432 2456899999976 33 33333 89999999988876666654443
Q ss_pred ceEEEEeeCCCcc-EEEEcCCCCccEEEEEEccCCccc------------------------------ccCceEEEEeC-
Q 019672 136 KGLCAFSPSLNAC-FLAVPASTTKGSVLVYNVMELHSH------------------------------CEAPLAAIVLS- 183 (337)
Q Consensus 136 ~~~~~~~~~~~~~-~la~~~~~~dg~v~i~d~~~~~~~------------------------------~~~~i~~~~~s- 183 (337)
.+.+++++|++. ++++++ .||+|++||+.+++.. +...+.+++|+
T Consensus 188 -~v~~v~~~p~~~~~l~~~~--~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~ 264 (393)
T 4gq1_A 188 -PGISVQFRPSNPNQLIVGE--RNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIG 264 (393)
T ss_dssp -CEEEEEEETTEEEEEEEEE--TTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEET
T ss_pred -CcEEEEECCCCCceEEecC--CCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeec
Confidence 466777777764 677776 5999999999876431 12567888886
Q ss_pred CCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEE------------------Eeec--CCCcccEEEEEeCC
Q 019672 184 SNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSL------------------SFGQ--SMQFQDILVATSSS 243 (337)
Q Consensus 184 ~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l------------------~fs~--dg~~~~~las~s~d 243 (337)
|||+.|++++.|++ +++||+.+++....+... ...+..+ .|+| ++. ++++|+.|
T Consensus 265 ~dg~~l~s~s~d~~-i~vwd~~~~~~~~~l~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~sgs~D 338 (393)
T 4gq1_A 265 SDGSGILAMCKSGA-WLRWNLFANNDYNEISDS--TMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDY---FATAHSQH 338 (393)
T ss_dssp TTTCEEEEECTTSE-EEEEEC---------------------CCSCSEEEECSSCCSSCCEECSSCTTE---EEEEETTT
T ss_pred CCCCEEEEEeCCCC-EEEEECccCCCCceEeee--cCccccEEEccccccccccCcceeEEEccCCCCE---EEEEECCC
Confidence 89999999999998 699999888765554321 1122222 2332 333 67888999
Q ss_pred CcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEE
Q 019672 244 GSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIF 314 (337)
Q Consensus 244 g~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~ 314 (337)
|+|+|||+.++..... ... +...+..+++.+++++|++++.+| +.+|.+
T Consensus 339 g~V~lwd~~~~~~~~~----------~~~-----------~~~~V~svafspdG~~LA~as~~G-v~lvrL 387 (393)
T 4gq1_A 339 GLIQLINTYEKDSNSI----------PIQ-----------LGMPIVDFCWHQDGSHLAIATEGS-VLLTRL 387 (393)
T ss_dssp TEEEEEETTCTTCCEE----------EEE-----------CSSCEEEEEECTTSSEEEEEESSE-EEEEEE
T ss_pred CEEEEEECCCCcEEEE----------ecC-----------CCCcEEEEEEcCCCCEEEEEeCCC-eEEEEE
Confidence 9999999986643221 000 001122334566778888887665 666655
No 126
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=5.4e-22 Score=186.62 Aligned_cols=217 Identities=9% Similarity=0.083 Sum_probs=156.5
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeC------CEEEEEEccCCCEEEEEeCCCCCCCCCceE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVG------AFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v 77 (337)
.+...|++++|+|||++||+++.+| ++|||.++ ++.....+ .+..+++.+++..++.++. |++|
T Consensus 83 ~~~~~V~~vawSPdG~~LAs~s~dg~V~iwd~~~--~l~~l~~~~~~~~~sv~svafSPDG~~LAsgs~-------DGtV 153 (588)
T 2j04_A 83 QPVCYPRVCKPSPIDDWMAVLSNNGNVSVFKDNK--MLTNLDSKGNLSSRTYHCFEWNPIESSIVVGNE-------DGEL 153 (588)
T ss_dssp SCSCCEEEEEECSSSSCEEEEETTSCEEEEETTE--EEEECCCSSCSTTTCEEEEEECSSSSCEEEEET-------TSEE
T ss_pred CCCCcEEEEEECCCCCEEEEEeCCCcEEEEeCCc--eeeeccCCCccccccEEEEEEcCCCCEEEEEcC-------CCEE
Confidence 3477899999999999999999888 59999654 33333312 3677777788888877664 9999
Q ss_pred EEEECCCCCE-------EEEEEc-----CCceeEEEEcCCeEEEEE-CCeEEEEECCCCee---eeeec-CCCCCceEEE
Q 019672 78 CLFNTTTGTA-------LRELNF-----LTSILAVRLNKKRLVIVL-REKTYIYDANTLAI---LDTID-TVPNLKGLCA 140 (337)
Q Consensus 78 ~iwd~~~~~~-------~~~~~~-----~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~---~~~~~-~~~~~~~~~~ 140 (337)
+|||+++++. +.++.. ...|.+++|+|+++++++ |++|++||+...+. .+++. .+. ..+.+
T Consensus 154 kIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrlWd~~~~~~~~~~~tL~~~h~--~~V~s 231 (588)
T 2j04_A 154 QFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFSMTVSASSHQPVSRMIQNASR--RKITD 231 (588)
T ss_dssp EEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEEECCCSSSSCCCEEEEECCCS--SCCCC
T ss_pred EEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEEEECCCCccccceeeeccccc--CcEEE
Confidence 9999998863 455532 248999999999944444 89999999987763 23443 222 23444
Q ss_pred EeeCCCccEEEEcCCCCccEEEEEEccCCcc-----cccCceEEEEe--CCCCCEEEEEeCCCcEEEEEEcC------CC
Q 019672 141 FSPSLNACFLAVPASTTKGSVLVYNVMELHS-----HCEAPLAAIVL--SSNGMYIATASEQGTIIRVFLVS------EA 207 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~-----~~~~~i~~~~~--s~dg~~lat~s~dg~~i~vwd~~------~~ 207 (337)
++++ +..+|+++ +++|++||+.+++. .|...|..++| +||+..|+++++||+ |+|... ++
T Consensus 232 vaFs--g~~LASa~---~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~--klw~~d~~~~spd~ 304 (588)
T 2j04_A 232 LKIV--DYKVVLTC---PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY--KVLLEDELHVTADN 304 (588)
T ss_dssp EEEE--TTEEEEEC---SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE--EEEESSSEEEECCC
T ss_pred EEEE--CCEEEEEe---CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC--EEEeeccEEECCCc
Confidence 4454 36888876 58999999998776 35589999999 999999999999985 889863 11
Q ss_pred cee-------Eeecc-------CCcceeEEEEEeecCCCcccEEEEEeC
Q 019672 208 TKS-------YSFRR-------GTYPSTIFSLSFGQSMQFQDILVATSS 242 (337)
Q Consensus 208 ~~~-------~~~~~-------~~~~~~i~~l~fs~dg~~~~~las~s~ 242 (337)
+.+ +.+.. -.....|++++|||||+ .+|+++.
T Consensus 305 ~l~a~~d~~v~lW~~~g~~l~~~~~~~~I~~va~SPdG~---~lA~~~~ 350 (588)
T 2j04_A 305 IIAPYLEKKFKKWSTIWNEFNNYETTLVIHGISLSPDGY---SIAIVYD 350 (588)
T ss_dssp SSHHHHHHHHHHTTTTTTSSSSSCCEEEEEEEEECTTSS---EEEEEEE
T ss_pred eEEEEcCCEEEEEECCCCceeeeccceEEEEEEECCCCC---EEEEEEe
Confidence 110 00000 00133599999999999 8998764
No 127
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.89 E-value=7.3e-21 Score=182.10 Aligned_cols=280 Identities=15% Similarity=0.092 Sum_probs=193.7
Q ss_pred EEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC--CCCCEEE
Q 019672 14 SFNQDNSGFALSTKDG-FKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT--TTGTALR 89 (337)
Q Consensus 14 ~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~--~~~~~~~ 89 (337)
.|+|++.+++++..++ +.+||..+++++.... .+.+..+.+.+++..++.++. |++|++||+ .+++.+.
T Consensus 144 ~~~p~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~~~~~v~~spdg~~l~v~~~-------d~~V~v~D~~~~t~~~~~ 216 (543)
T 1nir_A 144 DLDLPNLFSVTLRDAGQIALVDGDSKKIVKVIDTGYAVHISRMSASGRYLLVIGR-------DARIDMIDLWAKEPTKVA 216 (543)
T ss_dssp CCCGGGEEEEEEGGGTEEEEEETTTCCEEEEEECSTTEEEEEECTTSCEEEEEET-------TSEEEEEETTSSSCEEEE
T ss_pred ccCCCCEEEEEEcCCCeEEEEECCCceEEEEEecCcccceEEECCCCCEEEEECC-------CCeEEEEECcCCCCcEEE
Confidence 4899998888887765 7999999999887766 344556667777777766654 799999999 8999999
Q ss_pred EEEcCCceeEEEEcC----C--eEEEEE--CCeEEEEECCCCeeeeeecCCC--------CC-ceEEEEeeCCCccEEEE
Q 019672 90 ELNFLTSILAVRLNK----K--RLVIVL--REKTYIYDANTLAILDTIDTVP--------NL-KGLCAFSPSLNACFLAV 152 (337)
Q Consensus 90 ~~~~~~~v~~i~~~~----~--~~~v~~--d~~i~i~d~~~~~~~~~~~~~~--------~~-~~~~~~~~~~~~~~la~ 152 (337)
++.....+..++|++ + .++++. +++|.+||..+++.+..+.... ++ ..+.++..++++..+++
T Consensus 217 ~i~~g~~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~v 296 (543)
T 1nir_A 217 EIKIGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIV 296 (543)
T ss_dssp EEECCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEE
T ss_pred EEecCCCcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCCCCEEEE
Confidence 998877889999987 4 355554 7899999999999888886532 11 14556666665555554
Q ss_pred cCCCCccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeC-CCcEEEEEEcCCCceeEeeccCC--cceeEE
Q 019672 153 PASTTKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASE-QGTIIRVFLVSEATKSYSFRRGT--YPSTIF 223 (337)
Q Consensus 153 ~~~~~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~-dg~~i~vwd~~~~~~~~~~~~~~--~~~~i~ 223 (337)
+.. .++.|.+||+.+.+... ...+..++|+|||++|++++. +++ |++||+.+++++..+..+. |.....
T Consensus 297 s~~-~~g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~-v~v~D~~tg~l~~~i~~g~~ph~g~g~ 374 (543)
T 1nir_A 297 NVK-ETGKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNK-VAVIDSKDRRLSALVDVGKTPHPGRGA 374 (543)
T ss_dssp EET-TTTEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTE-EEEEETTTTEEEEEEECSSSBCCTTCE
T ss_pred EEC-CCCeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCe-EEEEECCCCeEEEeeccCCCCCCCCCc
Confidence 444 58999999998754332 255778999999998776654 666 6899999999988776432 221222
Q ss_pred EEEeecC-CCcccEEEEEe-CCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEE
Q 019672 224 SLSFGQS-MQFQDILVATS-SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVS 301 (337)
Q Consensus 224 ~l~fs~d-g~~~~~las~s-~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~ 301 (337)
.+ ++|+ |+ .+++++ .|++|.|||+++...+.. ....+. .++ ..... ...+.++|++++|+
T Consensus 375 ~~-~~p~~g~---~~~s~~~~d~~V~v~d~~~~~~~~~---~~~~v~-~l~-------~~g~~---~~~v~~~pdg~~l~ 436 (543)
T 1nir_A 375 NF-VHPKYGP---VWSTSHLGDGSISLIGTDPKNHPQY---AWKKVA-ELQ-------GQGGG---SLFIKTHPKSSHLY 436 (543)
T ss_dssp EE-EETTTEE---EEEEEBSSSSEEEEEECCTTTCTTT---BTSEEE-EEE-------CSCSC---CCCEECCTTCCEEE
T ss_pred cc-CCCCCcc---EEEeccCCCceEEEEEeCCCCCchh---cCeEEE-EEE-------cCCCC---ceEEEcCCCCCcEE
Confidence 22 5787 55 677775 689999999987432210 111111 111 00000 11234467778888
Q ss_pred EEE-------eCCcEEEEEEecCCCC
Q 019672 302 VIT-------YNGYFVEYIFSINNCC 320 (337)
Q Consensus 302 ~~~-------~dg~~~~~~~~~~~~~ 320 (337)
+.+ .+++|.+|++++.+..
T Consensus 437 v~~~~~~~~~~~~~v~v~d~~~~~~~ 462 (543)
T 1nir_A 437 VDTTFNPDARISQSVAVFDLKNLDAK 462 (543)
T ss_dssp ECCTTCSSHHHHTCEEEEETTCTTSC
T ss_pred EecCCCCCcccCceEEEEECCCCCCC
Confidence 887 3779999988765544
No 128
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.88 E-value=7.4e-20 Score=175.12 Aligned_cols=276 Identities=12% Similarity=0.077 Sum_probs=188.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCc-eEEEeC--CCCcEEEEEee-CCEEEEEEcc----CCCEEEEEeCCCCCCCCCceEEEE
Q 019672 9 PVFFVSFNQDNSGFALSTKDG-FKIFDS--STGRLCYERAV-GAFSIVEMLY----SSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g-~~vw~~--~~~~~~~~~~~-~~~~~~~~~~----~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.+.+++|+|||++|++++.++ +++||+ .+++.+..... .....+.+.+ ++..++.... .+++|.+|
T Consensus 180 ~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~g~~p~~va~sp~~~~dg~~l~v~~~------~~~~v~v~ 253 (543)
T 1nir_A 180 AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAGAY------WPPQFAIM 253 (543)
T ss_dssp TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEEEE------ESSEEEEE
T ss_pred ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEecCCCcceEEeCCCcCCCCCEEEEEEc------cCCeEEEE
Confidence 388999999999998877655 799999 78887766553 3345566766 6777665543 48999999
Q ss_pred ECCCCCEEEEEEcC-----------C-ceeEEEEcCC--eEEEEE--CCeEEEEECCCCeeee--eecCCCCCceEEEEe
Q 019672 81 NTTTGTALRELNFL-----------T-SILAVRLNKK--RLVIVL--REKTYIYDANTLAILD--TIDTVPNLKGLCAFS 142 (337)
Q Consensus 81 d~~~~~~~~~~~~~-----------~-~v~~i~~~~~--~~~v~~--d~~i~i~d~~~~~~~~--~~~~~~~~~~~~~~~ 142 (337)
|..+++++..+... . .+.++.++++ .+++.. +++|.+||+.+.+.+. .+.... ....+.
T Consensus 254 D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~---~~~~~~ 330 (543)
T 1nir_A 254 DGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAP---FLHDGG 330 (543)
T ss_dssp ETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCS---SCCCEE
T ss_pred eccccccceeecccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCc---CccCce
Confidence 99999999887642 2 5788888863 344444 7899999998765443 343222 233446
Q ss_pred eCCCccEEEEcCCCCccEEEEEEccCCccccc---------CceEEEEeCCC-CCEEEEEe-CCCcEEEEEEcCC-----
Q 019672 143 PSLNACFLAVPASTTKGSVLVYNVMELHSHCE---------APLAAIVLSSN-GMYIATAS-EQGTIIRVFLVSE----- 206 (337)
Q Consensus 143 ~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~---------~~i~~~~~s~d-g~~lat~s-~dg~~i~vwd~~~----- 206 (337)
++|++.++++++. .+++|.+||+.+++.... +....+ ++|+ |..+|+++ .|++ |+|||+.+
T Consensus 331 ~spdg~~l~va~~-~~~~v~v~D~~tg~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~-V~v~d~~~~~~~~ 407 (543)
T 1nir_A 331 WDSSHRYFMTAAN-NSNKVAVIDSKDRRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGS-ISLIGTDPKNHPQ 407 (543)
T ss_dssp ECTTSCEEEEEEG-GGTEEEEEETTTTEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSE-EEEEECCTTTCTT
T ss_pred ECCCCCEEEEEec-CCCeEEEEECCCCeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCce-EEEEEeCCCCCch
Confidence 6778887765553 488999999998876432 112233 4677 66777776 5677 69999998
Q ss_pred --CceeEeeccCCcceeEEEEEeecCCCcccEEEEEe-------CCCcEEEEecCCCcccCCCCccccc-ccc--ccccc
Q 019672 207 --ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-------SSGSLHVFSPGFAINQRRGGRTSSI-LGS--ILPES 274 (337)
Q Consensus 207 --~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s-------~dg~v~iw~l~~~~~~~~~~~~~~~-~~~--~~~~~ 274 (337)
++.++++..+ ...+..|+|||||+ +|.+++ .+++|.|||+++.+.... .+ ++. -+++.
T Consensus 408 ~~~~~v~~l~~~--g~~~~~v~~~pdg~---~l~v~~~~~~~~~~~~~v~v~d~~~~~~~~~-----~~~v~~~~~~~~~ 477 (543)
T 1nir_A 408 YAWKKVAELQGQ--GGGSLFIKTHPKSS---HLYVDTTFNPDARISQSVAVFDLKNLDAKYQ-----VLPIAEWADLGEG 477 (543)
T ss_dssp TBTSEEEEEECS--CSCCCCEECCTTCC---EEEECCTTCSSHHHHTCEEEEETTCTTSCCE-----EECHHHHHCCCSS
T ss_pred hcCeEEEEEEcC--CCCceEEEcCCCCC---cEEEecCCCCCcccCceEEEEECCCCCCCeE-----EeechhhcccCCC
Confidence 7888888632 23467799999999 999987 277999999987654210 00 000 01111
Q ss_pred ceeecccccceeeeeccCCCcccCEEEEEE-----eCCcEEEEEEec
Q 019672 275 VNEVLDPADHHVLRNAFPAGVKRASVSVIT-----YNGYFVEYIFSI 316 (337)
Q Consensus 275 ~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~-----~dg~~~~~~~~~ 316 (337)
...+|.+ .+.++++.|++.. .|+.|.+|+..+
T Consensus 478 ~~~~~~~----------~~~~~g~~~~~s~~~~~~~~~~i~v~D~~t 514 (543)
T 1nir_A 478 AKRVVQP----------EYNKRGDEVWFSVWNGKNDSSALVVVDDKT 514 (543)
T ss_dssp CCEEEEE----------EECSSSSEEEEEEECCTTSCCEEEEEETTT
T ss_pred CCceEec----------cCCCCCCEEEEEeecCCCCCCeEEEEECCC
Confidence 1223333 3467778888774 379999976543
No 129
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=3.3e-20 Score=171.92 Aligned_cols=235 Identities=12% Similarity=0.021 Sum_probs=159.4
Q ss_pred CCeEEEEEcCCCC-EEEEEc----CCc-----eEEEeC--CCCcEEEE--EeeCCEEEEEEcc----------------C
Q 019672 8 YPVFFVSFNQDNS-GFALST----KDG-----FKIFDS--STGRLCYE--RAVGAFSIVEMLY----------------S 57 (337)
Q Consensus 8 ~~v~~~~fs~dg~-~la~g~----~~g-----~~vw~~--~~~~~~~~--~~~~~~~~~~~~~----------------~ 57 (337)
.++...+|++.|. ++++|+ .+| +++||+ .+++++.. ...+...+..+.+ .
T Consensus 63 ~~~~~~~w~~~g~~~~~~g~~~~~~~G~~~~~i~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~ 142 (415)
T 2hqs_A 63 QEVQPAAWSALGIDAVVVGQVTPNPDGSYNVAYQLVDTGGAPGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAF 142 (415)
T ss_dssp GGCCHHHHHTTTCCEEEEEEEEECTTSCEEEEEEEEECSSSTTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCT
T ss_pred cCcCHHHHHhcCCCEEEEEEEEECCCCeEEEEEEEEeCCCCCCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcC
Confidence 4678888998885 565775 344 699999 88887644 2222111111111 1
Q ss_pred CCEEEEEeCCCCCCCCC---ceEEEEECCCCCEEEEEEcCCceeEEEEcCCe--EEEEE-C---CeEEEEECCCCeeeee
Q 019672 58 SSLLAIVGAGEQPSLSP---RRLCLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVL-R---EKTYIYDANTLAILDT 128 (337)
Q Consensus 58 ~~~~~~~~~g~~~~~~d---~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~-d---~~i~i~d~~~~~~~~~ 128 (337)
...+++++... .+ ++|++||+..+.......+...+.+++|+|++ ++.+. + ..|++||+.+++...
T Consensus 143 ~~~l~~~s~~~----~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~- 217 (415)
T 2hqs_A 143 RTRIAYVVQTN----GGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ- 217 (415)
T ss_dssp TCEEEEEEECS----SSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-
T ss_pred CCEEEEEEecC----CCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-
Confidence 45566665421 13 79999999865544444566789999999875 44444 4 389999999887653
Q ss_pred ecCCCCCceEEEEeeCCCccEEEEcCC-CCccEEEEEEccCCccc----ccCceEEEEeCCCCCEEEEEeCC-Cc-EEEE
Q 019672 129 IDTVPNLKGLCAFSPSLNACFLAVPAS-TTKGSVLVYNVMELHSH----CEAPLAAIVLSSNGMYIATASEQ-GT-IIRV 201 (337)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~la~~~~-~~dg~v~i~d~~~~~~~----~~~~i~~~~~s~dg~~lat~s~d-g~-~i~v 201 (337)
+..+ ...+.+++++|++..|++.+. +.+..|.+||+.+++.. +...+.+++|+|||++|++++.+ |. .|.+
T Consensus 218 l~~~--~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~ 295 (415)
T 2hqs_A 218 VASF--PRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQIRQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYK 295 (415)
T ss_dssp EECC--SSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEE
T ss_pred eecC--CCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCEEeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEE
Confidence 3332 235667788889988884432 12345999999876542 23679999999999999988864 42 2577
Q ss_pred EEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCC---CcEEEEecCCCc
Q 019672 202 FLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS---GSLHVFSPGFAI 255 (337)
Q Consensus 202 wd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d---g~v~iw~l~~~~ 255 (337)
||+.+++.. .+.. +...+.+++|||||+ +|++++.+ +.|++||+.+..
T Consensus 296 ~d~~~~~~~-~l~~--~~~~~~~~~~spdG~---~l~~~~~~~g~~~i~~~d~~~~~ 346 (415)
T 2hqs_A 296 VNINGGAPQ-RITW--EGSQNQDADVSSDGK---FMVMVSSNGGQQHIAKQDLATGG 346 (415)
T ss_dssp EETTSSCCE-ECCC--SSSEEEEEEECTTSS---EEEEEEECSSCEEEEEEETTTCC
T ss_pred EECCCCCEE-EEec--CCCcccCeEECCCCC---EEEEEECcCCceEEEEEECCCCC
Confidence 899887643 3322 234688999999999 88888765 589999998654
No 130
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.87 E-value=9.6e-19 Score=157.14 Aligned_cols=231 Identities=9% Similarity=0.041 Sum_probs=171.2
Q ss_pred CCeEEEEEcCCCCEEEEEcCC--------ceEEEeCCCCcEEEEEee-CCEEEEEEccCCCEEEEEeCCCCCCCCCceEE
Q 019672 8 YPVFFVSFNQDNSGFALSTKD--------GFKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~~--------g~~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~ 78 (337)
..+..++|+|||++++++..+ .+.+||..+++.+..... .....+.+.++.+.+++... .++.|.
T Consensus 41 ~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~------~~~~v~ 114 (353)
T 3vgz_A 41 KGAYEMAYSQQENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIHNDLKPFGATINNTTQTLWFGNT------VNSAVT 114 (353)
T ss_dssp SSEEEEEEETTTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEEESSCCCSEEEETTTTEEEEEET------TTTEEE
T ss_pred cCccceEECCCCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEecCCCcceEEECCCCCEEEEEec------CCCEEE
Confidence 457889999999988877632 479999999987766543 22334566677776666554 478999
Q ss_pred EEECCCCCEEEEEEcCC----------ceeEEEEcCC--eEEEEE---CCeEEEEECCCCeeeeeecCCCCCceEEEEee
Q 019672 79 LFNTTTGTALRELNFLT----------SILAVRLNKK--RLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSP 143 (337)
Q Consensus 79 iwd~~~~~~~~~~~~~~----------~v~~i~~~~~--~~~v~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~ 143 (337)
+||.++++.+..+..+. .+.++.++++ .++++. ++.|.+||+.+++.+..+...... ...+.+
T Consensus 115 ~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~--~~~~~~ 192 (353)
T 3vgz_A 115 AIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKM--STGLAL 192 (353)
T ss_dssp EEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTT--CCCCEE
T ss_pred EEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCc--cceEEE
Confidence 99999999988887643 2677888765 466655 578999999999888887632221 223455
Q ss_pred CCCccEEEEcCCCCccEEEEEEccCCccccc---------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeec
Q 019672 144 SLNACFLAVPASTTKGSVLVYNVMELHSHCE---------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 144 ~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~---------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~ 214 (337)
+|++..+++++ .++.|.+||+.+++.... ..+..++|+|+|++|+.++.+...|.+||+.+++.+..+.
T Consensus 193 s~dg~~l~~~~--~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~ 270 (353)
T 3vgz_A 193 DSEGKRLYTTN--ADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVA 270 (353)
T ss_dssp ETTTTEEEEEC--TTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEE
T ss_pred CCCCCEEEEEc--CCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEE
Confidence 66777887776 489999999988765432 3577899999999888777663347899999999888776
Q ss_pred cCCcceeEEEEEeecCCCcccEEEEEe-CCCcEEEEecCCCc
Q 019672 215 RGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAI 255 (337)
Q Consensus 215 ~~~~~~~i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~~~~ 255 (337)
.+. ...++|+|||+ +++++. .+++|.+||+.+.+
T Consensus 271 ~~~----~~~~~~s~dg~---~l~v~~~~~~~v~~~d~~~~~ 305 (353)
T 3vgz_A 271 APE----SLAVLFNPARN---EAYVTHRQAGKVSVIDAKSYK 305 (353)
T ss_dssp CSS----CCCEEEETTTT---EEEEEETTTTEEEEEETTTTE
T ss_pred cCC----CceEEECCCCC---EEEEEECCCCeEEEEECCCCe
Confidence 432 14689999998 665555 68999999987654
No 131
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=2.8e-19 Score=159.55 Aligned_cols=273 Identities=10% Similarity=0.043 Sum_probs=178.1
Q ss_pred EEEcCCCCE-EEEEcCCc-eEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE-
Q 019672 13 VSFNQDNSG-FALSTKDG-FKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA- 87 (337)
Q Consensus 13 ~~fs~dg~~-la~g~~~g-~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~- 87 (337)
..|.+++.. ++++..++ +.+||.++++.+..... ... .+.+.++.+.+++++. .+++|.+||+.+++.
T Consensus 3 ~~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~------~~~~i~~~d~~~~~~~ 75 (331)
T 3u4y_A 3 AMFQTTSNFGIVVEQHLRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSD------FCQTLVQIETQLEPPK 75 (331)
T ss_dssp ----CCCCEEEEEEGGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEES------TTCEEEEEECSSSSCE
T ss_pred eeEcCCCCEEEEEecCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeC------CCCeEEEEECCCCcee
Confidence 356777766 55555544 79999999988665543 223 5666667776666655 378999999999987
Q ss_pred EEEEEcCCceeE-EEEcCCe--EEEEECC----eEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccE
Q 019672 88 LRELNFLTSILA-VRLNKKR--LVIVLRE----KTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (337)
Q Consensus 88 ~~~~~~~~~v~~-i~~~~~~--~~v~~d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~ 160 (337)
...+........ +.+++++ +++..++ .|.+||+.+++.+..+..... ...+.++|++.++++++. .++.
T Consensus 76 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~---~~~~~~spdg~~l~~~~~-~~~~ 151 (331)
T 3u4y_A 76 VVAIQEGQSSMADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYD---AVGIAISPNGNGLILIDR-SSAN 151 (331)
T ss_dssp EEEEEECSSCCCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTT---EEEEEECTTSSCEEEEEE-TTTT
T ss_pred EEecccCCCCccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCC---ccceEECCCCCEEEEEec-CCCc
Confidence 666666665555 8898764 4432233 899999999988887765433 356677778776655543 3567
Q ss_pred -EEEEEccCCccc---------ccCceEEEEeCCCCCEEEEEe-CCCcEEEEEEcCCCce---eEeeccCCcceeEEEEE
Q 019672 161 -VLVYNVMELHSH---------CEAPLAAIVLSSNGMYIATAS-EQGTIIRVFLVSEATK---SYSFRRGTYPSTIFSLS 226 (337)
Q Consensus 161 -v~i~d~~~~~~~---------~~~~i~~~~~s~dg~~lat~s-~dg~~i~vwd~~~~~~---~~~~~~~~~~~~i~~l~ 226 (337)
|.+|++...... ....+..++|+|||++|+.++ .++. |++||+.+++. +..+..+ ..+..++
T Consensus 152 ~i~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~d~~~~~~~~~~~~~~~~---~~~~~~~ 227 (331)
T 3u4y_A 152 TVRRFKIDADGVLFDTGQEFISGGTRPFNITFTPDGNFAFVANLIGNS-IGILETQNPENITLLNAVGTN---NLPGTIV 227 (331)
T ss_dssp EEEEEEECTTCCEEEEEEEEECSSSSEEEEEECTTSSEEEEEETTTTE-EEEEECSSTTSCEEEEEEECS---SCCCCEE
T ss_pred eEEEEEECCCCcEeecCCccccCCCCccceEECCCCCEEEEEeCCCCe-EEEEECCCCcccceeeeccCC---CCCceEE
Confidence 999998643221 115689999999999766655 4665 79999999988 6666533 3467899
Q ss_pred eecCCCcccEEEEEe-CCCcEEEEecCCCcccCCCCccccccccc--ccccceeecccccceeeeeccCCCcccCEEEEE
Q 019672 227 FGQSMQFQDILVATS-SSGSLHVFSPGFAINQRRGGRTSSILGSI--LPESVNEVLDPADHHVLRNAFPAGVKRASVSVI 303 (337)
Q Consensus 227 fs~dg~~~~~las~s-~dg~v~iw~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~ 303 (337)
|+|||+ +|++++ .++.|.+||+++.+.... ..+.... .+... .. .+.+.+.+++++|++.
T Consensus 228 ~spdg~---~l~v~~~~~~~i~~~d~~~~~~~~~----~~~~~~~~~~~~~~---~~-------~~~~~~spdg~~l~v~ 290 (331)
T 3u4y_A 228 VSRDGS---TVYVLTESTVDVFNFNQLSGTLSFV----KSFGHGLLIDPRPL---FG-------ANQMALNKTETKLFIS 290 (331)
T ss_dssp ECTTSS---EEEEECSSEEEEEEEETTTTEEEEE----EEEECCCCCCCGGG---TT-------CCCEEECTTSSEEEEE
T ss_pred ECCCCC---EEEEEEcCCCEEEEEECCCCceeee----cccccccccCCCCc---cc-------ccceEECCCCCEEEEe
Confidence 999999 776665 578899999976543110 0000000 00000 00 0123446677888776
Q ss_pred Ee-CCcEEEEEEecC
Q 019672 304 TY-NGYFVEYIFSIN 317 (337)
Q Consensus 304 ~~-dg~~~~~~~~~~ 317 (337)
+. +|.+.+|++...
T Consensus 291 ~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 291 ANISRELKVFTISGK 305 (331)
T ss_dssp ETTTTEEEEEETTSC
T ss_pred cCCCCcEEEEEecCC
Confidence 66 569999998543
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.86 E-value=4.3e-19 Score=158.35 Aligned_cols=234 Identities=12% Similarity=0.097 Sum_probs=161.9
Q ss_pred CCCeEEEEEcCCCCEEEEEcC--CceEEEeCCCCcE-EEEEee-CCEEE-EEEccCCCEEEEEeCCCCCCCCCc--eEEE
Q 019672 7 SYPVFFVSFNQDNSGFALSTK--DGFKIFDSSTGRL-CYERAV-GAFSI-VEMLYSSSLLAIVGAGEQPSLSPR--RLCL 79 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~--~g~~vw~~~~~~~-~~~~~~-~~~~~-~~~~~~~~~~~~~~~g~~~~~~d~--~v~i 79 (337)
..+. +++|+|||++++++.. +.+.+||+++++. ...... ..... +.+.++++.++ ++.+ .++ .|.+
T Consensus 40 ~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~-~~~~-----~~~~~~i~v 112 (331)
T 3u4y_A 40 YDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQFAV-TVTG-----LNHPFNMQS 112 (331)
T ss_dssp CCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSSEEE-ECCC-----SSSSCEEEE
T ss_pred CCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCCEEE-EecC-----CCCcccEEE
Confidence 3445 9999999997665543 3579999999886 444332 22333 56777777777 4432 123 9999
Q ss_pred EECCCCCEEEEEEcCCceeEEEEcCCe--EEEEE--CCe-EEEEECCCCeee-----eeecCCCCCceEEEEeeCCCccE
Q 019672 80 FNTTTGTALRELNFLTSILAVRLNKKR--LVIVL--REK-TYIYDANTLAIL-----DTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 80 wd~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~--d~~-i~i~d~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
||+.+++.+..+.......++.+++++ ++++. ++. +.+|++.....+ ..+.. ......+.++|++.+
T Consensus 113 ~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~~---~~~~~~~~~spdg~~ 189 (331)
T 3u4y_A 113 YSFLKNKFISTIPIPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFISG---GTRPFNITFTPDGNF 189 (331)
T ss_dssp EETTTTEEEEEEECCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEECS---SSSEEEEEECTTSSE
T ss_pred EECCCCCeEEEEECCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccccC---CCCccceEECCCCCE
Confidence 999999998888887788999999874 55554 467 999998754322 22221 223456677788876
Q ss_pred EEEcCCCCccEEEEEEccCCcc---ccc----CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCce--eEeeccC--Cc
Q 019672 150 LAVPASTTKGSVLVYNVMELHS---HCE----APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK--SYSFRRG--TY 218 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~---~~~----~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~--~~~~~~~--~~ 218 (337)
+++++. .++.|.+||+.+++. ... ..+..++|+|||++|+.++.....|.+||+.+++. +..+..+ .+
T Consensus 190 l~v~~~-~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~ 268 (331)
T 3u4y_A 190 AFVANL-IGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLID 268 (331)
T ss_dssp EEEEET-TTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCC
T ss_pred EEEEeC-CCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccC
Confidence 665553 489999999988776 332 66789999999998777665333478999999887 4433322 11
Q ss_pred cee---EEEEEeecCCCcccEEEEEe-CCCcEEEEecCCC
Q 019672 219 PST---IFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFA 254 (337)
Q Consensus 219 ~~~---i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~~~ 254 (337)
... ...++|+|||+ +|++++ .+++|+|||+...
T Consensus 269 ~~~~~~~~~~~~spdg~---~l~v~~~~~~~v~v~d~~~~ 305 (331)
T 3u4y_A 269 PRPLFGANQMALNKTET---KLFISANISRELKVFTISGK 305 (331)
T ss_dssp CGGGTTCCCEEECTTSS---EEEEEETTTTEEEEEETTSC
T ss_pred CCCcccccceEECCCCC---EEEEecCCCCcEEEEEecCC
Confidence 111 35689999999 775554 5679999999754
No 133
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.85 E-value=1.4e-19 Score=179.28 Aligned_cols=231 Identities=10% Similarity=0.034 Sum_probs=165.6
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-Cc------eEEEeCCCCcEEEEEee--CC------------------------EEEEE
Q 019672 7 SYPVFFVSFNQDNSGFALSTK-DG------FKIFDSSTGRLCYERAV--GA------------------------FSIVE 53 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~-~g------~~vw~~~~~~~~~~~~~--~~------------------------~~~~~ 53 (337)
...|.+++|+|||++|++++. ++ +++||+++++....... .. +..+.
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 115 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDYQ 115 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCCE
T ss_pred CCCCCCceEecCCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcceeE
Confidence 567999999999999998876 54 69999999876543322 11 34456
Q ss_pred EccCCCEEEEEeCCCCCCCCCceEEEEECCCC---CEEEEEEcCCceeEEEEcCCe--EEEEECCeEEEEECCCCeeeee
Q 019672 54 MLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG---TALRELNFLTSILAVRLNKKR--LVIVLREKTYIYDANTLAILDT 128 (337)
Q Consensus 54 ~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~---~~~~~~~~~~~v~~i~~~~~~--~~v~~d~~i~i~d~~~~~~~~~ 128 (337)
+.+++..+++.+. ++|.+||+.++ +......+...+..+.|+|++ ++.+.++.|++||+.+++....
T Consensus 116 ~SpDg~~l~~~~~--------~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~~~ 187 (741)
T 2ecf_A 116 WSPDAQRLLFPLG--------GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQMQL 187 (741)
T ss_dssp ECTTSSEEEEEET--------TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEEEC
T ss_pred ECCCCCEEEEEeC--------CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEEEe
Confidence 7777777777653 79999999988 543333344678999999876 4445588999999998876544
Q ss_pred ecCCCCCc--------------eEEEEeeCCCccEEEEcCCCCcc---------------------------------EE
Q 019672 129 IDTVPNLK--------------GLCAFSPSLNACFLAVPASTTKG---------------------------------SV 161 (337)
Q Consensus 129 ~~~~~~~~--------------~~~~~~~~~~~~~la~~~~~~dg---------------------------------~v 161 (337)
........ ...++.++||+.+|++++. |+ .|
T Consensus 188 ~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~--d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 188 TADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARI--DESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp CCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEE--ECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred ccCCccceeccccceeeeeccccccceEECCCCCEEEEEEE--cCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 33221100 0244667788888888752 33 78
Q ss_pred EEEEccC-Cccc-------ccCceEEEEeCCCCCEEEEEeC-----CCcEEEEEEcCCCceeEeeccCCcce---eEEEE
Q 019672 162 LVYNVME-LHSH-------CEAPLAAIVLSSNGMYIATASE-----QGTIIRVFLVSEATKSYSFRRGTYPS---TIFSL 225 (337)
Q Consensus 162 ~i~d~~~-~~~~-------~~~~i~~~~~s~dg~~lat~s~-----dg~~i~vwd~~~~~~~~~~~~~~~~~---~i~~l 225 (337)
.+||+.+ ++.. +...+..++| |||++|+.++. +.. |++||+.+++....+... ... .+.++
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~-i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~ 342 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLD-LVEVTLASNQQRVLAHET-SPTWVPLHNSL 342 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEE-EEEEETTTCCEEEEEEEE-CSSCCCCCSCC
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEE-EEEEECCCCceEEEEEcC-CCCcCCcCCce
Confidence 8899987 6532 2356899999 99999998764 344 689999999876555322 111 34578
Q ss_pred EeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 226 SFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 226 ~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
+|||||+ ++++++.||+++||.++.
T Consensus 343 ~~spdg~---~~~~~~~~g~~~l~~~~~ 367 (741)
T 2ecf_A 343 RFLDDGS---ILWSSERTGFQHLYRIDS 367 (741)
T ss_dssp EECTTSC---EEEEECTTSSCEEEEECS
T ss_pred EECCCCe---EEEEecCCCccEEEEEcC
Confidence 9999999 999999999999998763
No 134
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=5.9e-19 Score=157.24 Aligned_cols=235 Identities=9% Similarity=0.036 Sum_probs=166.7
Q ss_pred CeEEEEEcCCCCEEE-EEcCC-ceEEEeCCCCcEEEEEeeC-------CEEEEEEccCCCEEEEEeCCC---CCCC--CC
Q 019672 9 PVFFVSFNQDNSGFA-LSTKD-GFKIFDSSTGRLCYERAVG-------AFSIVEMLYSSSLLAIVGAGE---QPSL--SP 74 (337)
Q Consensus 9 ~v~~~~fs~dg~~la-~g~~~-g~~vw~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~g~---~~~~--~d 74 (337)
.+.+++|+|||++++ ++..+ .+.+||+.+++.+...... ....+.+.++++.++++..+. ...+ .+
T Consensus 35 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~ 114 (337)
T 1pby_B 35 TPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQP 114 (337)
T ss_dssp CCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECC
T ss_pred CccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCEEEEEecccccccccccccC
Confidence 477899999998765 44444 4799999999876554421 223456666676766654110 0001 26
Q ss_pred ceEEEEECCCCCEEEEEEcCCceeEEEEcCCeE-EEEECCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEc
Q 019672 75 RRLCLFNTTTGTALRELNFLTSILAVRLNKKRL-VIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~-~v~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 153 (337)
+.|.+||+.+++.+..+.....+.++.++++.- ++..++.|++||+.+++.+..+......... .++|++..++..
T Consensus 115 ~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~---~~s~dg~~l~~~ 191 (337)
T 1pby_B 115 TRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGLGRDLHVMDPEAGTLVEDKPIQSWEAET---YAQPDVLAVWNQ 191 (337)
T ss_dssp CEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEESSSEEEEETTTTEEEEEECSTTTTTTT---BCCCBCCCCCCC
T ss_pred ceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEeCCeEEEEECCCCcEeeeeeccccCCCc---eeCCCccEEeee
Confidence 899999999998888888777788888987652 3333889999999999887777544311111 334555555444
Q ss_pred CCCCcc-----------------------EEEEEEccCCccc------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEc
Q 019672 154 ASTTKG-----------------------SVLVYNVMELHSH------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLV 204 (337)
Q Consensus 154 ~~~~dg-----------------------~v~i~d~~~~~~~------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~ 204 (337)
+. .++ .|.+||+.+++.. +...+.+++|+|||++|+++ ++. |++||+
T Consensus 192 ~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~-v~~~d~ 267 (337)
T 1pby_B 192 HE-SSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNV-LESFDL 267 (337)
T ss_dssp CT-TTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESE-EEEEET
T ss_pred cc-CCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCe-EEEEEC
Confidence 32 223 4789999887653 12467889999999999988 566 689999
Q ss_pred CCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 205 SEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 205 ~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
.+++.+..+..+ ..+.+++|+|||+ +|++++.++.|++||+++.+.
T Consensus 268 ~~~~~~~~~~~~---~~~~~~~~s~dg~---~l~~~~~~~~i~v~d~~~~~~ 313 (337)
T 1pby_B 268 EKNASIKRVPLP---HSYYSVNVSTDGS---TVWLGGALGDLAAYDAETLEK 313 (337)
T ss_dssp TTTEEEEEEECS---SCCCEEEECTTSC---EEEEESBSSEEEEEETTTCCE
T ss_pred CCCcCcceecCC---CceeeEEECCCCC---EEEEEcCCCcEEEEECcCCcE
Confidence 999888777543 2467899999999 899999999999999987653
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.84 E-value=3.1e-18 Score=152.96 Aligned_cols=267 Identities=12% Similarity=0.104 Sum_probs=168.0
Q ss_pred EEEEcC-CceEEEeCC-CCc--EEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC--CCCE--EEEEE
Q 019672 22 FALSTK-DGFKIFDSS-TGR--LCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTA--LRELN 92 (337)
Q Consensus 22 la~g~~-~g~~vw~~~-~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~--~~~~--~~~~~ 92 (337)
++++.. +.+++|+++ +++ .+.... ...+..+.+.++.+.+++++. .++.|.+|++. +++. +..+.
T Consensus 8 ~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~------~~~~v~~~~~~~~~~~~~~~~~~~ 81 (343)
T 1ri6_A 8 YIASPESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVR------PEFRVLAYRIAPDDGALTFAAESA 81 (343)
T ss_dssp EEEEGGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEET------TTTEEEEEEECTTTCCEEEEEEEE
T ss_pred EEeCCCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCCCCEEEEeec------CCCeEEEEEecCCCCceeeccccc
Confidence 444354 457999985 343 222222 234455677777777776665 25899999987 5553 34555
Q ss_pred cCCceeEEEEcCCe--EEEEE--CCeEEEEECC---CCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEE
Q 019672 93 FLTSILAVRLNKKR--LVIVL--REKTYIYDAN---TLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYN 165 (337)
Q Consensus 93 ~~~~v~~i~~~~~~--~~v~~--d~~i~i~d~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d 165 (337)
....+..+++++++ ++++. ++.|.+||+. ..+.+..+..... +.++.++|++.++++++. .++.|.+||
T Consensus 82 ~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~---~~~~~~s~dg~~l~~~~~-~~~~v~~~d 157 (343)
T 1ri6_A 82 LPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDG---CHSANISPDNRTLWVPAL-KQDRICLFT 157 (343)
T ss_dssp CSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTT---BCCCEECTTSSEEEEEEG-GGTEEEEEE
T ss_pred cCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCC---ceEEEECCCCCEEEEecC-CCCEEEEEE
Confidence 55678889998764 55555 6789999994 3344445443332 344556677777776653 489999999
Q ss_pred ccC-Cccc----------ccCceEEEEeCCCCCEEEEEe-CCCcEEEEEEcCC--Cce--eEeec---cCC-cceeEEEE
Q 019672 166 VME-LHSH----------CEAPLAAIVLSSNGMYIATAS-EQGTIIRVFLVSE--ATK--SYSFR---RGT-YPSTIFSL 225 (337)
Q Consensus 166 ~~~-~~~~----------~~~~i~~~~~s~dg~~lat~s-~dg~~i~vwd~~~--~~~--~~~~~---~~~-~~~~i~~l 225 (337)
+.+ ++.. ....+.+++|+|+|++|+.++ .++. |++||+.. ++. +..+. .+. ....+.++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~-i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i 236 (343)
T 1ri6_A 158 VSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSS-VDVWELKDPHGNIECVQTLDMMPENFSDTRWAADI 236 (343)
T ss_dssp ECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTE-EEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEE
T ss_pred ecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCE-EEEEEecCCCCcEEEEeeccccCccccccCCccce
Confidence 987 4321 114788999999999776665 6666 69999953 432 22221 111 12246789
Q ss_pred EeecCCCcccEEE-EEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEE
Q 019672 226 SFGQSMQFQDILV-ATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT 304 (337)
Q Consensus 226 ~fs~dg~~~~~la-s~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (337)
+|+|||+ +|+ ++..++.|++|+++...... .... .++.. .. ...+.+.+++++|++++
T Consensus 237 ~~s~dg~---~l~v~~~~~~~i~v~d~~~~~~~~------~~~~-~~~~~----~~-------~~~~~~s~dg~~l~~~~ 295 (343)
T 1ri6_A 237 HITPDGR---HLYACDRTASLITVFSVSEDGSVL------SKEG-FQPTE----TQ-------PRGFNVDHSGKYLIAAG 295 (343)
T ss_dssp EECTTSS---EEEEEETTTTEEEEEEECTTSCCE------EEEE-EEECS----SS-------CCCEEECTTSSEEEEEC
T ss_pred EECCCCC---EEEEEecCCCEEEEEEEcCCCCce------EEee-eecCC----Cc-------cceEEECCCCCEEEEec
Confidence 9999998 666 55578999999997422100 0000 00000 00 01223355668888888
Q ss_pred -eCCcEEEEEEecCCCC
Q 019672 305 -YNGYFVEYIFSINNCC 320 (337)
Q Consensus 305 -~dg~~~~~~~~~~~~~ 320 (337)
.+|.+.+|.++.+.+.
T Consensus 296 ~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 296 QKSHHISVYEIVGEQGL 312 (343)
T ss_dssp TTTCEEEEEEEETTTTE
T ss_pred CCCCeEEEEEEcCCCce
Confidence 5899999999987765
No 136
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.84 E-value=6.3e-19 Score=157.06 Aligned_cols=256 Identities=12% Similarity=0.070 Sum_probs=174.7
Q ss_pred CEEEEEcCC-ceEEEeCCCCcEEEEEeeC----CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC
Q 019672 20 SGFALSTKD-GFKIFDSSTGRLCYERAVG----AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL 94 (337)
Q Consensus 20 ~~la~g~~~-g~~vw~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~ 94 (337)
++|++++.+ .+.+||+.+++.+.....+ ....+.+.++.+.++++.. .++.|.+||+.+++.+..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~------~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVN------KSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEET------TTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeC------CCCeEEEEECCCCCeEeeEEcC
Confidence 356666655 4799999999887665533 2455667777766666554 4789999999999988888764
Q ss_pred C------ceeEEEEcCCe--EEEEE-------------CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEc
Q 019672 95 T------SILAVRLNKKR--LVIVL-------------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 95 ~------~v~~i~~~~~~--~~v~~-------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 153 (337)
. .+..+.+++++ ++++. ++.|.+||+.+++.+..+.....+ ..+.++|++.+++++
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~---~~~~~s~dg~~l~~~ 152 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQI---TMLAWARDGSKLYGL 152 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSC---CCEEECTTSSCEEEE
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCc---ceeEECCCCCEEEEe
Confidence 4 67778888754 55553 589999999998888777653332 334566777777766
Q ss_pred CCCCccEEEEEEccCCccccc----CceEEEEeCCCCCEEEEEeCCCcE-----------------------EEEEEcCC
Q 019672 154 ASTTKGSVLVYNVMELHSHCE----APLAAIVLSSNGMYIATASEQGTI-----------------------IRVFLVSE 206 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~~~----~~i~~~~~s~dg~~lat~s~dg~~-----------------------i~vwd~~~ 206 (337)
++.|.+||+.+++.... .....++|+|||++|+.++..+.. |.+||+.+
T Consensus 153 ----~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~ 228 (337)
T 1pby_B 153 ----GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLET 228 (337)
T ss_dssp ----SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTT
T ss_pred ----CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCC
Confidence 36799999988765422 111234789999977666544332 47999999
Q ss_pred CceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeeccccccee
Q 019672 207 ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHV 286 (337)
Q Consensus 207 ~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~ 286 (337)
++.. .+....+...+.+++|+|||+ +|+++ ++.|++||+++.+.... +. .+.. .+
T Consensus 229 ~~~~-~~~~~~~~~~~~~~~~s~dg~---~l~~~--~~~v~~~d~~~~~~~~~-------~~--~~~~---~~------- 283 (337)
T 1pby_B 229 GEMA-MREVRIMDVFYFSTAVNPAKT---RAFGA--YNVLESFDLEKNASIKR-------VP--LPHS---YY------- 283 (337)
T ss_dssp CCEE-EEEEEECSSCEEEEEECTTSS---EEEEE--ESEEEEEETTTTEEEEE-------EE--CSSC---CC-------
T ss_pred CCce-EeecCCCCCceeeEEECCCCC---EEEEe--CCeEEEEECCCCcCcce-------ec--CCCc---ee-------
Confidence 8875 332222334578899999999 88888 78999999876543211 00 0000 11
Q ss_pred eeeccCCCcccCEEEEEEeCCcEEEEEEec
Q 019672 287 LRNAFPAGVKRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 287 ~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~ 316 (337)
.+.+.+++++|++++.+|.+++|++.+
T Consensus 284 ---~~~~s~dg~~l~~~~~~~~i~v~d~~~ 310 (337)
T 1pby_B 284 ---SVNVSTDGSTVWLGGALGDLAAYDAET 310 (337)
T ss_dssp ---EEEECTTSCEEEEESBSSEEEEEETTT
T ss_pred ---eEEECCCCCEEEEEcCCCcEEEEECcC
Confidence 122355668899999999999997643
No 137
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.84 E-value=7.5e-18 Score=156.00 Aligned_cols=221 Identities=15% Similarity=0.069 Sum_probs=158.2
Q ss_pred CCEEEEEcC-------CceEEEeCCCCcEE-EEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEE
Q 019672 19 NSGFALSTK-------DGFKIFDSSTGRLC-YERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRE 90 (337)
Q Consensus 19 g~~la~g~~-------~g~~vw~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~ 90 (337)
++.++.++. ..+++||++.+... +..+...+..+.+.++++.+++++.. ..+.+|++||+++++....
T Consensus 143 ~~~l~~~s~~~~~~~~~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~----~~~~~i~~~d~~tg~~~~l 218 (415)
T 2hqs_A 143 RTRIAYVVQTNGGQFPYELRVSDYDGYNQFVVHRSPQPLMSPAWSPDGSKLAYVTFE----SGRSALVIQTLANGAVRQV 218 (415)
T ss_dssp TCEEEEEEECSSSSCCEEEEEEETTSCSCEEEEEESSCEEEEEECTTSSEEEEEECT----TSSCEEEEEETTTCCEEEE
T ss_pred CCEEEEEEecCCCCccceEEEEcCCCCCCEEEeCCCCcceeeEEcCCCCEEEEEEec----CCCcEEEEEECCCCcEEEe
Confidence 556554443 24699999865432 23334567777888888888887752 0135999999999988765
Q ss_pred EEcCCceeEEEEcCCe--EEEEE--C--CeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCcc--EEE
Q 019672 91 LNFLTSILAVRLNKKR--LVIVL--R--EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG--SVL 162 (337)
Q Consensus 91 ~~~~~~v~~i~~~~~~--~~v~~--d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg--~v~ 162 (337)
..+...+.+++|+|++ ++++. + ..|++||+.+++. ..+..+ ...+.+++++|++.+|++.+. .++ .|.
T Consensus 219 ~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~--~~~~~~~~~spdg~~l~~~s~-~~g~~~i~ 294 (415)
T 2hqs_A 219 ASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTDG--RSNNTEPTWFPDSQNLAFTSD-QAGRPQVY 294 (415)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCCC--SSCEEEEEECTTSSEEEEEEC-TTSSCEEE
T ss_pred ecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcCC--CCcccceEECCCCCEEEEEEC-CCCCcEEE
Confidence 5566789999999875 44333 3 3699999988765 344333 234667788888988887763 244 688
Q ss_pred EEEccCCccc----ccCceEEEEeCCCCCEEEEEeCC-C-cEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccE
Q 019672 163 VYNVMELHSH----CEAPLAAIVLSSNGMYIATASEQ-G-TIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDI 236 (337)
Q Consensus 163 i~d~~~~~~~----~~~~i~~~~~s~dg~~lat~s~d-g-~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~ 236 (337)
+||+.+++.. +...+.+++|+|||++|++++.+ | ..|++||+.+++.. .+..+ . .+.+++|+|||+ +
T Consensus 295 ~~d~~~~~~~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~--~-~~~~~~~spdg~---~ 367 (415)
T 2hqs_A 295 KVNINGGAPQRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSST--F-LDETPSLAPNGT---M 367 (415)
T ss_dssp EEETTSSCCEECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCS--S-SCEEEEECTTSS---E
T ss_pred EEECCCCCEEEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCC--C-CcCCeEEcCCCC---E
Confidence 8898876532 22678899999999999998875 2 24789999988763 34322 2 688999999999 8
Q ss_pred EEEEeCCC---cEEEEecCCC
Q 019672 237 LVATSSSG---SLHVFSPGFA 254 (337)
Q Consensus 237 las~s~dg---~v~iw~l~~~ 254 (337)
|++++.++ .|++||++..
T Consensus 368 l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 368 VIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EEEEEEETTEEEEEEEETTSC
T ss_pred EEEEEcCCCccEEEEEECCCC
Confidence 99988887 7999998744
No 138
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.83 E-value=1.8e-18 Score=154.44 Aligned_cols=232 Identities=13% Similarity=0.113 Sum_probs=157.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC--ceEEEeCC--CCcE--EEEEee-CCEEEEEEccCCCEEEEEeCCCCCCCCCceEE
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKD--GFKIFDSS--TGRL--CYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~--g~~vw~~~--~~~~--~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~ 78 (337)
+...+.+++|+|+|++|+++..+ .+.+|+++ +++. +..... .....+.+.++.+.+++.+. .++.|.
T Consensus 36 ~~~~~~~~~~spdg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~------~~~~i~ 109 (343)
T 1ri6_A 36 VPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSY------NAGNVS 109 (343)
T ss_dssp CSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEET------TTTEEE
T ss_pred cCCCCceEEECCCCCEEEEeecCCCeEEEEEecCCCCceeeccccccCCCCcEEEEcCCCCEEEEEec------CCCeEE
Confidence 44567889999999988877663 47999987 5553 223322 23445667777777766654 478999
Q ss_pred EEEC---CCCCEEEEEEcCCceeEEEEcCCe--EEEEE--CCeEEEEECCC-Ceeee----eecCCCCCceEEEEeeCCC
Q 019672 79 LFNT---TTGTALRELNFLTSILAVRLNKKR--LVIVL--REKTYIYDANT-LAILD----TIDTVPNLKGLCAFSPSLN 146 (337)
Q Consensus 79 iwd~---~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~--d~~i~i~d~~~-~~~~~----~~~~~~~~~~~~~~~~~~~ 146 (337)
+||+ .+.+.+..+.....+.++.++++. ++++. ++.|.+||+.+ ++... .+.... ......+.++|+
T Consensus 110 ~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~pd 188 (343)
T 1ri6_A 110 VTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVE-GAGPRHMVFHPN 188 (343)
T ss_dssp EEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECST-TCCEEEEEECTT
T ss_pred EEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCC-CCCcceEEECCC
Confidence 9999 444455556556678889998764 55554 78999999987 54322 222221 124456677888
Q ss_pred ccEEEEcCCCCccEEEEEEccC--Cccc-----c--------cCceEEEEeCCCCCEEEEEe-CCCcEEEEEEcC--CC-
Q 019672 147 ACFLAVPASTTKGSVLVYNVME--LHSH-----C--------EAPLAAIVLSSNGMYIATAS-EQGTIIRVFLVS--EA- 207 (337)
Q Consensus 147 ~~~la~~~~~~dg~v~i~d~~~--~~~~-----~--------~~~i~~~~~s~dg~~lat~s-~dg~~i~vwd~~--~~- 207 (337)
+.++++++. .++.|.+||+.. +... . ...+..++|+|+|++|+.+. .++. |++||+. ++
T Consensus 189 g~~l~~~~~-~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~-i~v~d~~~~~~~ 266 (343)
T 1ri6_A 189 EQYAYCVNE-LNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASL-ITVFSVSEDGSV 266 (343)
T ss_dssp SSEEEEEET-TTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTE-EEEEEECTTSCC
T ss_pred CCEEEEEeC-CCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCE-EEEEEEcCCCCc
Confidence 887665543 489999999953 2211 1 02466899999999887554 6776 6999998 33
Q ss_pred -ceeEeeccCCcceeEEEEEeecCCCcccEEEEEe-CCCcEEEEecC
Q 019672 208 -TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPG 252 (337)
Q Consensus 208 -~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~ 252 (337)
+.+..+..+ ..+.+++|+|||+ +|++++ .++.|+||+++
T Consensus 267 ~~~~~~~~~~---~~~~~~~~s~dg~---~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 267 LSKEGFQPTE---TQPRGFNVDHSGK---YLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp EEEEEEEECS---SSCCCEEECTTSS---EEEEECTTTCEEEEEEEE
T ss_pred eEEeeeecCC---CccceEEECCCCC---EEEEecCCCCeEEEEEEc
Confidence 334444322 1277899999999 888887 67999999765
No 139
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.83 E-value=6.8e-19 Score=157.75 Aligned_cols=225 Identities=8% Similarity=0.058 Sum_probs=159.5
Q ss_pred EEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeC---CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE
Q 019672 12 FVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAVG---AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 12 ~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~ 87 (337)
.+++++++.++++++.++ +.+||+.+++.+.....+ ....+.+.++++.++++.. .++.|.+||+.+++.
T Consensus 4 g~~~~~~~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~------~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAGHEYMIVTNYPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNN------HYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTTCEEEEEEETTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEET------TTTEEEEEETTTTEE
T ss_pred cccccCCCEEEEEeCCCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeC------CCCcEEEEeCCCCcE
Confidence 457888988888877655 799999999877665433 2445667777766655554 478999999999998
Q ss_pred EEEEEcCC-------ceeEEEEcCC--eEEEEE-C------------CeEEEEECCCCeeeeeecCCCCCceEEEEeeCC
Q 019672 88 LRELNFLT-------SILAVRLNKK--RLVIVL-R------------EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL 145 (337)
Q Consensus 88 ~~~~~~~~-------~v~~i~~~~~--~~~v~~-d------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (337)
+..+.... .+..+.++++ .++++. + +.|.+||+.+++....+.....+..+.+++++|
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~ 157 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAAD 157 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECT
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECC
Confidence 88777543 2678889876 455555 3 899999998754333221111222344556677
Q ss_pred CccEEEEcCCCCccEEEEEEccCCccccc---C-----------------------------------------------
Q 019672 146 NACFLAVPASTTKGSVLVYNVMELHSHCE---A----------------------------------------------- 175 (337)
Q Consensus 146 ~~~~la~~~~~~dg~v~i~d~~~~~~~~~---~----------------------------------------------- 175 (337)
++. +++.+ +.|.+||+.+++.... .
T Consensus 158 dg~-l~~~~----~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~ 232 (349)
T 1jmx_B 158 DGS-LYVAG----PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLL 232 (349)
T ss_dssp TSC-EEEES----SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEE
T ss_pred CCc-EEEcc----CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccc
Confidence 777 44443 2399999877653211 1
Q ss_pred -----------------------ceEEEEeCC-CCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCC
Q 019672 176 -----------------------PLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSM 231 (337)
Q Consensus 176 -----------------------~i~~~~~s~-dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg 231 (337)
.+.+++|+| ||++|+++ ++. |.+||+.+++.+..+..+. .+.+++|+|||
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~-v~~~d~~~~~~~~~~~~~~---~~~~~~~s~dg 306 (349)
T 1jmx_B 233 YGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNR-LAKYDLKQRKLIKAANLDH---TYYCVAFDKKG 306 (349)
T ss_dssp EEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESE-EEEEETTTTEEEEEEECSS---CCCEEEECSSS
T ss_pred eeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCe-EEEEECccCeEEEEEcCCC---CccceEECCCC
Confidence 345677889 99999988 666 6899999999887775332 36789999999
Q ss_pred CcccEEEEEeCCCcEEEEecCCCcc
Q 019672 232 QFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 232 ~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
+ +|++++.++.|++||+++.+.
T Consensus 307 ~---~l~~~~~~~~v~v~d~~~~~~ 328 (349)
T 1jmx_B 307 D---KLYLGGTFNDLAVFNPDTLEK 328 (349)
T ss_dssp S---CEEEESBSSEEEEEETTTTEE
T ss_pred C---EEEEecCCCeEEEEeccccce
Confidence 8 788888899999999976543
No 140
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.82 E-value=5.1e-19 Score=174.58 Aligned_cols=238 Identities=11% Similarity=-0.014 Sum_probs=161.0
Q ss_pred CCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEeeCC-----EEEEEEccCCCEEEEEeCCCCC--CCCCceEEEE
Q 019672 8 YPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVGA-----FSIVEMLYSSSLLAIVGAGEQP--SLSPRRLCLF 80 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~g~~~--~~~d~~v~iw 80 (337)
..+.+++|+|||++++++.++.+++||+.+++.......+. +..+.+.++++.+++.+..... ...++.+.+|
T Consensus 17 ~~~~~~~~spdg~~~~~~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~ 96 (723)
T 1xfd_A 17 IHDPEAKWISDTEFIYREQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLS 96 (723)
T ss_dssp CCCCCCCBSSSSCBCCCCSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEE
T ss_pred ccccccEEcCCCcEEEEeCCCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEEE
Confidence 44778999999998777544557999999987655444332 6667888888888887653211 1235899999
Q ss_pred ECCCCCEEEEEEcC----CceeEEEEcCCe--EEEEECCeEEEEECCCCeeeeeecCCCCCc----------------eE
Q 019672 81 NTTTGTALRELNFL----TSILAVRLNKKR--LVIVLREKTYIYDANTLAILDTIDTVPNLK----------------GL 138 (337)
Q Consensus 81 d~~~~~~~~~~~~~----~~v~~i~~~~~~--~~v~~d~~i~i~d~~~~~~~~~~~~~~~~~----------------~~ 138 (337)
|+.+++. ..+... ..+..+.|+|++ ++.+.++.|++||+.+++.......+.... ..
T Consensus 97 d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~ 175 (723)
T 1xfd_A 97 KIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTH 175 (723)
T ss_dssp ESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSS
T ss_pred ECCCCce-EeccCCccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCc
Confidence 9999876 333221 137778898765 555668899999998876655443322111 12
Q ss_pred EEEeeCCCccEEEEcCCCC--------------------------------ccEEEEEEccCCcccc-----------cC
Q 019672 139 CAFSPSLNACFLAVPASTT--------------------------------KGSVLVYNVMELHSHC-----------EA 175 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~~--------------------------------dg~v~i~d~~~~~~~~-----------~~ 175 (337)
.++.++||+..|++.+.+. +..|.+||+.+++... ..
T Consensus 176 ~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~ 255 (723)
T 1xfd_A 176 IAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREY 255 (723)
T ss_dssp EEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSE
T ss_pred ceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccc
Confidence 5677888998988875210 2389999998776311 24
Q ss_pred ceEEEEeCCCCCEEEEEeCCC---cEEEEEEcCCCceeEeeccCCcceeE----EEEEeecCCCcccEEEE--EeCCC--
Q 019672 176 PLAAIVLSSNGMYIATASEQG---TIIRVFLVSEATKSYSFRRGTYPSTI----FSLSFGQSMQFQDILVA--TSSSG-- 244 (337)
Q Consensus 176 ~i~~~~~s~dg~~lat~s~dg---~~i~vwd~~~~~~~~~~~~~~~~~~i----~~l~fs~dg~~~~~las--~s~dg-- 244 (337)
.+.+++|||||++|++.+..+ ..|++||+.+++....+... +...+ .+++|||||+ +|+. +..++
T Consensus 256 ~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~-~~~~~~~~~~~~~~spdg~---~l~~~~~~~~~~~ 331 (723)
T 1xfd_A 256 YITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDE-SEAWLHRQNEEPVFSKDGR---KFFFIRAIPQGGR 331 (723)
T ss_dssp EEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEE-CSSCCCCCCCCCEECTTSC---SEEEEEEECCSSS
T ss_pred eeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEec-cCCEEeccCCCceEcCCCC---eEEEEEecccCCC
Confidence 688999999999998776432 34789999999876544321 11222 3689999999 6664 45667
Q ss_pred --c--EEEEe
Q 019672 245 --S--LHVFS 250 (337)
Q Consensus 245 --~--v~iw~ 250 (337)
. |.+||
T Consensus 332 ~~~~~l~~~d 341 (723)
T 1xfd_A 332 GKFYHITVSS 341 (723)
T ss_dssp SCEEEEEEEC
T ss_pred cceeEEEEEe
Confidence 4 55555
No 141
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=1.7e-18 Score=170.62 Aligned_cols=229 Identities=11% Similarity=0.035 Sum_probs=154.7
Q ss_pred CeEEEEEcCCCCEEEEEcCCceEEEeCCCCcE--EEEEee------------------CCEEEEEEccCCCEEEEEeCCC
Q 019672 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRL--CYERAV------------------GAFSIVEMLYSSSLLAIVGAGE 68 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~--~~~~~~------------------~~~~~~~~~~~~~~~~~~~~g~ 68 (337)
.+..++|. |+.++.+..+++ +||+.+++. ..-... ..+..+.+.++ ..+++..
T Consensus 27 ~~~~~~w~--g~~~~~~~~~~i-~~d~~tg~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~v~~~~~spd-~~~~~~~--- 99 (706)
T 2z3z_A 27 YVVGLQWM--GDNYVFIEGDDL-VFNKANGKSAQTTRFSAADLNALMPEGCKFQTTDAFPSFRTLDAGR-GLVVLFT--- 99 (706)
T ss_dssp -CTTCEEE--TTEEEEEETTEE-EEEC-------CEEEEHHHHHTTC-----------CCCEEEEETTT-TEEEEEE---
T ss_pred cCCCCcCc--CCeEEEEeCCcE-EEECCCCcEeeEEeechhHhhhhccchhccccccccCceeEEECCC-CeEEEEE---
Confidence 34556777 666666677779 999998865 221111 24556666666 5555543
Q ss_pred CCCCCCceEEEEECCCCCEEEEEEcCCceeEEEEcCCe--EEEEECCeEEEEECCC-----CeeeeeecCCCCCc-----
Q 019672 69 QPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVLREKTYIYDANT-----LAILDTIDTVPNLK----- 136 (337)
Q Consensus 69 ~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~d~~i~i~d~~~-----~~~~~~~~~~~~~~----- 136 (337)
+++|++||+.+++..........+.+++|+|++ ++.+.++.|++||+.+ ++............
T Consensus 100 -----~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~ 174 (706)
T 2z3z_A 100 -----QGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVRNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQA 174 (706)
T ss_dssp -----TTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSC
T ss_pred -----CCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEECCeEEEEecCcccccCCCcEEeccCCCCCeEcccc
Confidence 589999999998776655566678888998875 5555599999999988 76554332221100
Q ss_pred -------eEEEEeeCCCccEEEEcCC-------------------------------CCccEEEEEEccCCccc------
Q 019672 137 -------GLCAFSPSLNACFLAVPAS-------------------------------TTKGSVLVYNVMELHSH------ 172 (337)
Q Consensus 137 -------~~~~~~~~~~~~~la~~~~-------------------------------~~dg~v~i~d~~~~~~~------ 172 (337)
.+.++.++||+.+|++++. ..+..|.+||+.+++..
T Consensus 175 ~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~ 254 (706)
T 2z3z_A 175 VHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE 254 (706)
T ss_dssp CGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS
T ss_pred hhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC
Confidence 0245677788889888751 12578999999877632
Q ss_pred -ccCceEEEEeCCCCCEEEEEeCCC----cEEEEEEcCCCceeEeeccCCcc---eeEEEEEeec--CCCcccEEEEEeC
Q 019672 173 -CEAPLAAIVLSSNGMYIATASEQG----TIIRVFLVSEATKSYSFRRGTYP---STIFSLSFGQ--SMQFQDILVATSS 242 (337)
Q Consensus 173 -~~~~i~~~~~s~dg~~lat~s~dg----~~i~vwd~~~~~~~~~~~~~~~~---~~i~~l~fs~--dg~~~~~las~s~ 242 (337)
+...+.+++|+|||++|++++.++ ..|++||+.+++....+...... ..+.+++|+| ||+ +|++++.
T Consensus 255 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg~---~l~~~~~ 331 (706)
T 2z3z_A 255 PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNNQ---FIWQSRR 331 (706)
T ss_dssp CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSSE---EEEEECT
T ss_pred CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCCE---EEEEEcc
Confidence 125689999999999999988775 13689999998444333211111 1246789999 999 9999999
Q ss_pred CCcEEEEecC
Q 019672 243 SGSLHVFSPG 252 (337)
Q Consensus 243 dg~v~iw~l~ 252 (337)
|++++||.++
T Consensus 332 ~g~~~l~~~~ 341 (706)
T 2z3z_A 332 DGWNHLYLYD 341 (706)
T ss_dssp TSSCEEEEEE
T ss_pred CCccEEEEEE
Confidence 9999999886
No 142
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.81 E-value=3.5e-17 Score=146.92 Aligned_cols=223 Identities=12% Similarity=0.063 Sum_probs=162.7
Q ss_pred CeEEEEEcCCCCEEEEE-cCC-ceEEEeCCCCcEEEEEeeCC-----------EEEEEEccCCCEEEEEeCCCCCCCCCc
Q 019672 9 PVFFVSFNQDNSGFALS-TKD-GFKIFDSSTGRLCYERAVGA-----------FSIVEMLYSSSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g-~~~-g~~vw~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~g~~~~~~d~ 75 (337)
.+..++|+|||++++++ ..+ .+.+||..+++.+.....+. ...+.+.++.+.+++...+ .++
T Consensus 90 ~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~-----~~~ 164 (353)
T 3vgz_A 90 KPFGATINNTTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRELVADDATNTVYISGIG-----KES 164 (353)
T ss_dssp CCCSEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEEEEEETTTTEEEEEEES-----SSC
T ss_pred CcceEEECCCCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCceEEECCCCCEEEEEecC-----CCc
Confidence 45678999999976554 433 47999999998876654422 3456677777777666532 478
Q ss_pred eEEEEECCCCCEEEEEE-cCCceeEEEEcCC--eEEEEE-CCeEEEEECCCCeeeeeecCCCC--CceEEEEeeCCCccE
Q 019672 76 RLCLFNTTTGTALRELN-FLTSILAVRLNKK--RLVIVL-REKTYIYDANTLAILDTIDTVPN--LKGLCAFSPSLNACF 149 (337)
Q Consensus 76 ~v~iwd~~~~~~~~~~~-~~~~v~~i~~~~~--~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 149 (337)
.|.+||.++++.+..+. ....+..+.++++ .++++. ++.|.+||+.+++.+..+..... ......+.++|++.+
T Consensus 165 ~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 244 (353)
T 3vgz_A 165 VIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQR 244 (353)
T ss_dssp EEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTE
T ss_pred eEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCE
Confidence 99999999999888887 4445778888765 455554 78999999999988877754221 223445666677777
Q ss_pred EEEcCCCCccEEEEEEccCCccccc---CceEEEEeCCCCCEEEEEe-CCCcEEEEEEcCCCceeEeeccCCcceeEEEE
Q 019672 150 LAVPASTTKGSVLVYNVMELHSHCE---APLAAIVLSSNGMYIATAS-EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSL 225 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~~~---~~i~~~~~s~dg~~lat~s-~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l 225 (337)
+++++. .++.|.+||+.+++.... .....++|+|+|++++.++ .++. |.+||+.+++.+..+..+ ..+.++
T Consensus 245 l~~~~~-~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~-v~~~d~~~~~~~~~~~~~---~~~~~~ 319 (353)
T 3vgz_A 245 AFITDS-KAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNEAYVTHRQAGK-VSVIDAKSYKVVKTFDTP---THPNSL 319 (353)
T ss_dssp EEEEES-SSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTEEEEEETTTTE-EEEEETTTTEEEEEEECC---SEEEEE
T ss_pred EEEEeC-CCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCEEEEEECCCCe-EEEEECCCCeEEEEEecC---CCCCeE
Confidence 666654 469999999988775433 3346799999999766666 5676 689999999988877543 357899
Q ss_pred EeecCCCcccEEEEEeCCC
Q 019672 226 SFGQSMQFQDILVATSSSG 244 (337)
Q Consensus 226 ~fs~dg~~~~~las~s~dg 244 (337)
+|+|||+ +|+++..++
T Consensus 320 ~~s~dg~---~l~v~~~~~ 335 (353)
T 3vgz_A 320 ALSADGK---TLYVSVKQK 335 (353)
T ss_dssp EECTTSC---EEEEEEECC
T ss_pred EEcCCCC---EEEEEEccc
Confidence 9999999 777776654
No 143
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.81 E-value=7.5e-18 Score=165.93 Aligned_cols=232 Identities=16% Similarity=0.089 Sum_probs=159.8
Q ss_pred CCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC--
Q 019672 8 YPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT-- 84 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~-- 84 (337)
.+|.+++|+|| +.++.+.+..+++||+.+++...... ...+..+.+.++++.++++. +++|.+||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~SpdG~~la~~~--------~~~i~v~~~~~~~ 152 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFTQGGLVGFDMLARKVTYLFDTNEETASLDFSPVGDRVAYVR--------NHNLYIARGGKLG 152 (706)
T ss_dssp CCCEEEEETTT-TEEEEEETTEEEEEETTTTEEEEEECCTTCCTTCEECTTSSEEEEEE--------TTEEEEEECBCTT
T ss_pred cCceeEEECCC-CeEEEEECCEEEEEECCCCceEEccCCcccccCCcCCCCCCEEEEEE--------CCeEEEEecCccc
Confidence 57999999999 77777777778999999887644332 23344567788888888753 68999999998
Q ss_pred ---CCEEEEEEcCCc---------------eeEEEEcCCe--EEEEE---------------------------------
Q 019672 85 ---GTALRELNFLTS---------------ILAVRLNKKR--LVIVL--------------------------------- 111 (337)
Q Consensus 85 ---~~~~~~~~~~~~---------------v~~i~~~~~~--~~v~~--------------------------------- 111 (337)
++.......... +.++.|+|++ ++++.
T Consensus 153 ~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~ 232 (706)
T 2z3z_A 153 EGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPS 232 (706)
T ss_dssp SCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCC
T ss_pred ccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCC
Confidence 776543322222 4788898875 44443
Q ss_pred -CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC---CccEEEEEEccCC-ccc--c--c-----Cce
Q 019672 112 -REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST---TKGSVLVYNVMEL-HSH--C--E-----APL 177 (337)
Q Consensus 112 -d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~dg~v~i~d~~~~-~~~--~--~-----~~i 177 (337)
+..|++||+.+++.........+...+..++++|++..+++.+.+ ....|.+||+.++ ... . . ..+
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~ 312 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPL 312 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeECcc
Confidence 147999999988765443222333456778888999888875421 1248999999887 321 1 1 234
Q ss_pred EEEEeCC--CCCEEEEEeCCCcEEEEEEcC-CCceeEeeccCCcceeEEE-EEeecCCCcccEEEEEeCC-C----cEEE
Q 019672 178 AAIVLSS--NGMYIATASEQGTIIRVFLVS-EATKSYSFRRGTYPSTIFS-LSFGQSMQFQDILVATSSS-G----SLHV 248 (337)
Q Consensus 178 ~~~~~s~--dg~~lat~s~dg~~i~vwd~~-~~~~~~~~~~~~~~~~i~~-l~fs~dg~~~~~las~s~d-g----~v~i 248 (337)
.+++|+| ||++|++++.||. ++||++. +++.+..+..+ ...+.+ ++|+|||+ .|+.++.+ + .|..
T Consensus 313 ~~~~~sp~~dg~~l~~~~~~g~-~~l~~~~~~~~~~~~l~~~--~~~v~~~~~~spdg~---~l~~~~~~~~~~~~~l~~ 386 (706)
T 2z3z_A 313 HPLTFLPGSNNQFIWQSRRDGW-NHLYLYDTTGRLIRQVTKG--EWEVTNFAGFDPKGT---RLYFESTEASPLERHFYC 386 (706)
T ss_dssp SCCEECTTCSSEEEEEECTTSS-CEEEEEETTSCEEEECCCS--SSCEEEEEEECTTSS---EEEEEESSSCTTCBEEEE
T ss_pred CCceeecCCCCEEEEEEccCCc-cEEEEEECCCCEEEecCCC--CeEEEeeeEEcCCCC---EEEEEecCCCCceEEEEE
Confidence 7789999 9999999999997 5899886 66666666433 344665 79999998 66655544 4 4555
Q ss_pred EecCCC
Q 019672 249 FSPGFA 254 (337)
Q Consensus 249 w~l~~~ 254 (337)
||+.+.
T Consensus 387 ~d~~~~ 392 (706)
T 2z3z_A 387 IDIKGG 392 (706)
T ss_dssp EETTCC
T ss_pred EEcCCC
Confidence 555443
No 144
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.80 E-value=3.9e-17 Score=146.91 Aligned_cols=232 Identities=10% Similarity=0.114 Sum_probs=150.4
Q ss_pred CCeEEEEEcCCCCEEEEEcC---CceEEEeCCCCcE--EEEE--eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 8 YPVFFVSFNQDNSGFALSTK---DGFKIFDSSTGRL--CYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~---~g~~vw~~~~~~~--~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.....++|+|||++++++.. +.+.+|++++++. +... .......+.+.++.+.+++++. .+++|.+|
T Consensus 40 ~~p~~~a~spdg~l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~------~~~~v~v~ 113 (347)
T 3hfq_A 40 QNPTYLALSAKDCLYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANY------HKGTAEVM 113 (347)
T ss_dssp SCCCCEEECTTCEEEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEET------TTTEEEEE
T ss_pred CCcceEEEccCCeEEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeC------CCCEEEEE
Confidence 44567999999994444432 3579999987753 2221 2234455677788887777664 47899999
Q ss_pred ECC-CCC--EEEEEEcC----------CceeEEEEcCCe-EEEEE--CCeEEEEECC-CCeee--eeecCCCCCceEEEE
Q 019672 81 NTT-TGT--ALRELNFL----------TSILAVRLNKKR-LVIVL--REKTYIYDAN-TLAIL--DTIDTVPNLKGLCAF 141 (337)
Q Consensus 81 d~~-~~~--~~~~~~~~----------~~v~~i~~~~~~-~~v~~--d~~i~i~d~~-~~~~~--~~~~~~~~~~~~~~~ 141 (337)
|+. .++ .+..+... ..+.++.+++++ ++++. ++.|.+|++. +++.. ..+.... ......+
T Consensus 114 ~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~-g~~p~~~ 192 (347)
T 3hfq_A 114 KIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEA-GFGPRHL 192 (347)
T ss_dssp EECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCT-TCCEEEE
T ss_pred EeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCC-CCCCceE
Confidence 985 333 23333332 137789998765 34443 6799999998 45332 2222211 1234456
Q ss_pred eeCCCccEEEEcCCCCccEEEEEEccC--Cccc--c---c--------CceEEEEeCCCCCEEE-EEeCCCcEEEEEEcC
Q 019672 142 SPSLNACFLAVPASTTKGSVLVYNVME--LHSH--C---E--------APLAAIVLSSNGMYIA-TASEQGTIIRVFLVS 205 (337)
Q Consensus 142 ~~~~~~~~la~~~~~~dg~v~i~d~~~--~~~~--~---~--------~~i~~~~~s~dg~~la-t~s~dg~~i~vwd~~ 205 (337)
.++|++.++++++. .++.|.+|++.. ++.. . . ..+..++|+|||++|+ +...+++ |++||+.
T Consensus 193 ~~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~-v~v~~~~ 270 (347)
T 3hfq_A 193 VFSPDGQYAFLAGE-LSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNT-LAVFAVT 270 (347)
T ss_dssp EECTTSSEEEEEET-TTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTE-EEEEEEC
T ss_pred EECCCCCEEEEEeC-CCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCE-EEEEEEC
Confidence 77788887666544 478999999874 3321 1 1 3488899999999874 5555776 6899997
Q ss_pred C-C--ceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCC-CcEEEEecCC
Q 019672 206 E-A--TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-GSLHVFSPGF 253 (337)
Q Consensus 206 ~-~--~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d-g~v~iw~l~~ 253 (337)
. + +.+..+..+ ...+..++|+|||+ +|++++.+ +.|.+|+++.
T Consensus 271 ~~g~~~~~~~~~~~--~~~~~~~~~spdg~---~l~v~~~~~~~v~v~~~d~ 317 (347)
T 3hfq_A 271 ADGHLTLIQQISTE--GDFPRDFDLDPTEA---FVVVVNQNTDNATLYARDL 317 (347)
T ss_dssp GGGCEEEEEEEECS--SSCCCEEEECTTSS---EEEEEETTTTEEEEEEECT
T ss_pred CCCcEEEeEEEecC--CCCcCeEEECCCCC---EEEEEEcCCCcEEEEEEeC
Confidence 3 2 334444321 23467899999999 88887765 8999997653
No 145
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.79 E-value=5.6e-18 Score=147.54 Aligned_cols=228 Identities=11% Similarity=-0.057 Sum_probs=153.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCceEEEeCCC-CcEEEEEee---CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSST-GRLCYERAV---GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
+...|.+++|+|||++|+++.++.+.+||+++ ++....... ..+..+.+.+++..+++++.... ....|.+||
T Consensus 40 ~~~~v~~~~~spdg~~l~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~---~~~~l~~~~ 116 (297)
T 2ojh_A 40 TPELFEAPNWSPDGKYLLLNSEGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEF---GKSAIYLLP 116 (297)
T ss_dssp ESSCCEEEEECTTSSEEEEEETTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTT---SSCEEEEEE
T ss_pred CCcceEeeEECCCCCEEEEEcCCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCC---CcceEEEEE
Confidence 46789999999999999999888889999998 765543322 23344677778888887763100 134555556
Q ss_pred CCCCCEEEEEEcCCceeEEEEcCCe--EEEEE--CCeEEEEEC--CCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCC
Q 019672 82 TTTGTALRELNFLTSILAVRLNKKR--LVIVL--REKTYIYDA--NTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS 155 (337)
Q Consensus 82 ~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~--d~~i~i~d~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (337)
..+++ ...+.....+..+.|+++. ++++. ++.++||++ .+++. ..+..+ ...+..+.++|++.++++.+.
T Consensus 117 ~~~~~-~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~--~~~~~~~~~s~dg~~l~~~~~ 192 (297)
T 2ojh_A 117 STGGT-PRLMTKNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHG--EGRNDGPDYSPDGRWIYFNSS 192 (297)
T ss_dssp TTCCC-CEECCSSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCCS--SSCEEEEEECTTSSEEEEEEC
T ss_pred CCCCc-eEEeecCCCccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcccC--CCccccceECCCCCEEEEEec
Confidence 66655 4445555568888998764 44233 788888885 44433 333322 234567777888888876653
Q ss_pred CCccEEEEEEcc-CCccc-----ccCceEEEEeCCCCCEEEEEeCCC----------cEEEEEEcCCCceeEeeccCCcc
Q 019672 156 TTKGSVLVYNVM-ELHSH-----CEAPLAAIVLSSNGMYIATASEQG----------TIIRVFLVSEATKSYSFRRGTYP 219 (337)
Q Consensus 156 ~~dg~v~i~d~~-~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg----------~~i~vwd~~~~~~~~~~~~~~~~ 219 (337)
.++.+.+|++. ..... +...+.+++|+|+|++|++++.++ ..|++||+.+++.........+.
T Consensus 193 -~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 271 (297)
T 2ojh_A 193 -RTGQMQIWRVRVDGSSVERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQ 271 (297)
T ss_dssp -TTSSCEEEEEETTSSCEEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEEST
T ss_pred -CCCCccEEEECCCCCCcEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCC
Confidence 47888999875 22222 226788999999999999988763 23689999988653322211123
Q ss_pred eeEEEEEeecCCCcccEEEEEeCCC
Q 019672 220 STIFSLSFGQSMQFQDILVATSSSG 244 (337)
Q Consensus 220 ~~i~~l~fs~dg~~~~~las~s~dg 244 (337)
..+.+++|+|||+ +|++++.+.
T Consensus 272 ~~~~~~~~spdg~---~l~~~~~~~ 293 (297)
T 2ojh_A 272 GTMNSPNWSPDGD---EFAYVRYFP 293 (297)
T ss_dssp TTSCSCCBCTTSS---EEEEEEECC
T ss_pred cccccceECCCCC---EEEEEEecc
Confidence 4578899999999 888887663
No 146
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.79 E-value=4.2e-16 Score=140.10 Aligned_cols=266 Identities=14% Similarity=0.074 Sum_probs=158.4
Q ss_pred CceEEEe--CCCCcEEE---EEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE--EEE-EEcCCceeE
Q 019672 28 DGFKIFD--SSTGRLCY---ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA--LRE-LNFLTSILA 99 (337)
Q Consensus 28 ~g~~vw~--~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~--~~~-~~~~~~v~~ 99 (337)
+++.+|. .+++++.. .........+.+.+++. ++.++.. ..++.|.+||+.+++. +.. ......+..
T Consensus 16 ~~i~v~~~d~~tg~~~~~~~~~~~~~p~~~a~spdg~-l~~~~~~----~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~ 90 (347)
T 3hfq_A 16 QGIYQGTLDTTAKTLTNDGLLAATQNPTYLALSAKDC-LYSVDKE----DDEGGIAAWQIDGQTAHKLNTVVAPGTPPAY 90 (347)
T ss_dssp CEEEEEEEETTTTEEEEEEEEEECSCCCCEEECTTCE-EEEEEEE----TTEEEEEEEEEETTEEEEEEEEEEESCCCSE
T ss_pred CCEEEEEEcCCCCeEEEeeeeeccCCcceEEEccCCe-EEEEEec----CCCceEEEEEecCCcEEEeeeeecCCCCCEE
Confidence 4566665 45565432 11223344456666666 4444320 0368999999977653 333 224557788
Q ss_pred EEEcCCe--EEEEE--CCeEEEEECC-CC--eeeeeecCCCC-------CceEEEEeeCCCccEEEEcCCCCccEEEEEE
Q 019672 100 VRLNKKR--LVIVL--REKTYIYDAN-TL--AILDTIDTVPN-------LKGLCAFSPSLNACFLAVPASTTKGSVLVYN 165 (337)
Q Consensus 100 i~~~~~~--~~v~~--d~~i~i~d~~-~~--~~~~~~~~~~~-------~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d 165 (337)
+++++++ ++++. ++.+.+|++. ++ +.+..+..... ...+.++.++|++.++++.. .++.|.+||
T Consensus 91 ~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~--~~~~v~~~~ 168 (347)
T 3hfq_A 91 VAVDEARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDL--GSDKVYVYN 168 (347)
T ss_dssp EEEETTTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEET--TTTEEEEEE
T ss_pred EEECCCCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEEEeC--CCCEEEEEE
Confidence 8888764 55555 6799999995 22 33333322111 11245566777777544443 478999999
Q ss_pred cc-CCcccc-------c-CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCC--Cce--eEeeccCCc----ceeEEEEEee
Q 019672 166 VM-ELHSHC-------E-APLAAIVLSSNGMYIATASEQGTIIRVFLVSE--ATK--SYSFRRGTY----PSTIFSLSFG 228 (337)
Q Consensus 166 ~~-~~~~~~-------~-~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~--~~~--~~~~~~~~~----~~~i~~l~fs 228 (337)
+. +++... . ..+..++|+|||++|++++..+..|++|++.. ++. +..+..... ...+..++|+
T Consensus 169 ~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s 248 (347)
T 3hfq_A 169 VSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQTGAFTQLGIVKTIPADYTAHNGAAAIRLS 248 (347)
T ss_dssp ECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEESSCTTCCSCCEEEEEEEC
T ss_pred ECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCCCCceEEeeeeeecCCCCCCCCcceeEEEC
Confidence 98 443211 1 36788999999997776654333478999874 543 222221111 1348889999
Q ss_pred cCCCcccEE-EEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeC-
Q 019672 229 QSMQFQDIL-VATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYN- 306 (337)
Q Consensus 229 ~dg~~~~~l-as~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~d- 306 (337)
|||+ +| ++...+++|++|++........ +. .++.. .. ....+.+.+++++|++++.+
T Consensus 249 pdG~---~l~v~~~~~~~v~v~~~~~~g~~~~-------~~-~~~~~-------~~---~~~~~~~spdg~~l~v~~~~~ 307 (347)
T 3hfq_A 249 HDGH---FLYVSNRGYNTLAVFAVTADGHLTL-------IQ-QISTE-------GD---FPRDFDLDPTEAFVVVVNQNT 307 (347)
T ss_dssp TTSC---EEEEEEETTTEEEEEEECGGGCEEE-------EE-EEECS-------SS---CCCEEEECTTSSEEEEEETTT
T ss_pred CCCC---EEEEEeCCCCEEEEEEECCCCcEEE-------eE-EEecC-------CC---CcCeEEECCCCCEEEEEEcCC
Confidence 9999 77 5666789999999974321110 00 00000 00 00122346667888888765
Q ss_pred CcEEEEEEecCCCCe
Q 019672 307 GYFVEYIFSINNCCE 321 (337)
Q Consensus 307 g~~~~~~~~~~~~~~ 321 (337)
+.+.+|.++.+.++.
T Consensus 308 ~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 308 DNATLYARDLTSGKL 322 (347)
T ss_dssp TEEEEEEECTTTCCE
T ss_pred CcEEEEEEeCCCCeE
Confidence 999999999888774
No 147
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.79 E-value=5.7e-18 Score=157.72 Aligned_cols=158 Identities=13% Similarity=0.124 Sum_probs=111.2
Q ss_pred EEcCCceeEEEEcCCeEEEE----E---CCeEEEEECCCC--------eeeeeecC-CCCCceEEEEeeCCC-ccEEEEc
Q 019672 91 LNFLTSILAVRLNKKRLVIV----L---REKTYIYDANTL--------AILDTIDT-VPNLKGLCAFSPSLN-ACFLAVP 153 (337)
Q Consensus 91 ~~~~~~v~~i~~~~~~~~v~----~---d~~i~i~d~~~~--------~~~~~~~~-~~~~~~~~~~~~~~~-~~~la~~ 153 (337)
+.+...|.+++|++++..++ + |+.|+|||+.++ +.+..+.. ..+...+.+++++|+ +.+++++
T Consensus 89 ~~~~~~v~~l~~spdg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~ 168 (434)
T 2oit_A 89 VPMKFPIHHLALSCDNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVC 168 (434)
T ss_dssp ECCSSCEEEEEECTTSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEE
T ss_pred ccCCCcccEEEEcCCCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEE
Confidence 44556788888887653333 3 678888987544 22222221 123345778888886 6788888
Q ss_pred CCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCC-----cceeEE
Q 019672 154 ASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT-----YPSTIF 223 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~-----~~~~i~ 223 (337)
+ .||+|++||++++... |...|.+++|+|+|++||+|+.||+ |++||++ ++....+.... +...|.
T Consensus 169 s--~Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~-v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~ 244 (434)
T 2oit_A 169 L--ADGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGT-VVQYLPT-LQEKKVIPCPPFYESDHPVRVL 244 (434)
T ss_dssp E--TTSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSC-EEEECTT-CCEEEEECCCTTCCTTSCEEEE
T ss_pred E--CCCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCc-EEEEccC-CcccccccCCcccCCCCceeEE
Confidence 7 5999999999887543 3478999999999999999999998 6999998 55555443221 234799
Q ss_pred EEEeecCCCcccEEEE-EeCCC------cEEEEecCCCc
Q 019672 224 SLSFGQSMQFQDILVA-TSSSG------SLHVFSPGFAI 255 (337)
Q Consensus 224 ~l~fs~dg~~~~~las-~s~dg------~v~iw~l~~~~ 255 (337)
+++|++++. ++++ ++.+| .+++|++.+..
T Consensus 245 ~v~w~~~~~---~l~~~~~~dg~~~~~~~v~i~~l~~~~ 280 (434)
T 2oit_A 245 DVLWIGTYV---FAIVYAAADGTLETSPDVVMALLPKKE 280 (434)
T ss_dssp EEEEEETTE---EEEEEEETTCCSSSCCEEEEEECCCTT
T ss_pred EEEEecCce---EEEEEccCCCccCCCCceEEEEeccCC
Confidence 999999987 6654 33443 38999998653
No 148
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.79 E-value=7.1e-17 Score=146.04 Aligned_cols=229 Identities=13% Similarity=0.124 Sum_probs=148.5
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-----ceEEEeCCC--CcEE--EEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 8 YPVFFVSFNQDNSGFALSTKD-----GFKIFDSST--GRLC--YERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~~-----g~~vw~~~~--~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
.....++|+|||++|++++.+ .+.+|+++. +++. ..... .....+.+ +.+.++.+.. .+++
T Consensus 50 ~~p~~l~~spdg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~------~~~~ 121 (361)
T 3scy_A 50 ANPSYLIPSADGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANY------SGGS 121 (361)
T ss_dssp SCCCSEEECTTSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEET------TTTE
T ss_pred CCCceEEECCCCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEEC------CCCE
Confidence 445678999999998887763 578898765 5432 22221 22333343 6666665554 4889
Q ss_pred EEEEECCCCCEEE----EEEcC-----------CceeEEEEcCCe--EEEEE--CCeEEEEECCCCe-------ee----
Q 019672 77 LCLFNTTTGTALR----ELNFL-----------TSILAVRLNKKR--LVIVL--REKTYIYDANTLA-------IL---- 126 (337)
Q Consensus 77 v~iwd~~~~~~~~----~~~~~-----------~~v~~i~~~~~~--~~v~~--d~~i~i~d~~~~~-------~~---- 126 (337)
|.+|++.....+. ...+. ..+.++.+++++ ++++. ++.|.+|++.... ..
T Consensus 122 v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~ 201 (361)
T 3scy_A 122 ITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGT 201 (361)
T ss_dssp EEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEE
T ss_pred EEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeeccc
Confidence 9999987543221 12221 124678898865 45554 6799999886433 11
Q ss_pred -eeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc--c--------cCceEEEEeCCCCCEEEEEeCC
Q 019672 127 -DTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH--C--------EAPLAAIVLSSNGMYIATASEQ 195 (337)
Q Consensus 127 -~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~--~--------~~~i~~~~~s~dg~~lat~s~d 195 (337)
..+... .......+.++|++.++++++. .++.|.+||+.++... . ......++|+|||++|+++..+
T Consensus 202 ~~~~~~~-~~~~~~~~~~spdg~~l~v~~~-~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~ 279 (361)
T 3scy_A 202 PEAFKVA-PGSGPRHLIFNSDGKFAYLINE-IGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRL 279 (361)
T ss_dssp EEEEECC-TTCCEEEEEECTTSSEEEEEET-TTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECS
T ss_pred ccceecC-CCCCCeEEEEcCCCCEEEEEcC-CCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCC
Confidence 122221 1233456677888887776654 4899999999865431 1 1346799999999998777665
Q ss_pred --CcEEEEEEcC--CCc--eeEeeccCCcceeEEEEEeecCCCcccEEEEEe-CCCcEEEEecCC
Q 019672 196 --GTIIRVFLVS--EAT--KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGF 253 (337)
Q Consensus 196 --g~~i~vwd~~--~~~--~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~~ 253 (337)
++ |++|++. +++ .+..+.. ...+.+++|+|||+ +|++++ .++.|.+|+++.
T Consensus 280 ~~~~-i~v~~~~~~~g~~~~~~~~~~---g~~~~~~~~spdg~---~l~~~~~~~~~v~v~~~d~ 337 (361)
T 3scy_A 280 KADG-VAIFKVDETNGTLTKVGYQLT---GIHPRNFIITPNGK---YLLVACRDTNVIQIFERDQ 337 (361)
T ss_dssp SSCE-EEEEEECTTTCCEEEEEEEEC---SSCCCEEEECTTSC---EEEEEETTTTEEEEEEECT
T ss_pred CCCE-EEEEEEcCCCCcEEEeeEecC---CCCCceEEECCCCC---EEEEEECCCCCEEEEEEEC
Confidence 55 7999995 455 3333332 23467899999999 888887 678999987753
No 149
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.79 E-value=2.5e-18 Score=165.78 Aligned_cols=225 Identities=12% Similarity=0.078 Sum_probs=150.0
Q ss_pred CCeEEEEEcCCCCEEEEEcC-Cc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE--EC-
Q 019672 8 YPVFFVSFNQDNSGFALSTK-DG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF--NT- 82 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~-~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw--d~- 82 (337)
.+|++++|+|||++||.++. ++ ++||++++++...-...+...+....++++.+++.+.... .+...+|| +.
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~---g~~~~~l~~~~~~ 98 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFSEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSK---GAEQHALFKVNTS 98 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECST---TSCCEEEEEEETT
T ss_pred cchheeecCCCCCeEEEEEccCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCC---CCcceEEEEEecc
Confidence 47999999999999998765 55 6999987665433222221244456666665554433100 14445554 54
Q ss_pred -CCCCEEEEEEcCC--ceeEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCC
Q 019672 83 -TTGTALRELNFLT--SILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (337)
Q Consensus 83 -~~~~~~~~~~~~~--~v~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 157 (337)
..+. . .+.... .+.+++++++.++++. ++.+.+||+.+++.......+. ..++++||+.++++.+.
T Consensus 99 ~~g~~-~-~l~~~~~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~~-----~~~~~spDG~~la~~~~-- 169 (582)
T 3o4h_A 99 RPGEE-Q-RLEAVKPMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLPG-----FGFVSDIRGDLIAGLGF-- 169 (582)
T ss_dssp STTCC-E-ECTTSCSBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEESS-----CEEEEEEETTEEEEEEE--
T ss_pred CCCcc-c-cccCCCCceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCCC-----ceEEECCCCCEEEEEEE--
Confidence 3332 2 332222 2445556666665554 5566799998886554433221 44556677889987663
Q ss_pred c----cEEEEEEccCCccc----ccCceEEEEeCCCCCEEEEEeCCC--cEEEEEEcCCCceeEeeccCCcceeEEEEE-
Q 019672 158 K----GSVLVYNVMELHSH----CEAPLAAIVLSSNGMYIATASEQG--TIIRVFLVSEATKSYSFRRGTYPSTIFSLS- 226 (337)
Q Consensus 158 d----g~v~i~d~~~~~~~----~~~~i~~~~~s~dg~~lat~s~dg--~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~- 226 (337)
+ +.|.+||+.+++.. +...+..++|||||++|+++..+| + |++||+.+++.. .+. + +...+.+++
T Consensus 170 ~~~~~~~i~~~d~~~g~~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~-i~~~d~~~~~~~-~~~-~-~~~~~~~~~~ 245 (582)
T 3o4h_A 170 FGGGRVSLFTSNLSSGGLRVFDSGEGSFSSASISPGMKVTAGLETAREAR-LVTVDPRDGSVE-DLE-L-PSKDFSSYRP 245 (582)
T ss_dssp EETTEEEEEEEETTTCCCEEECCSSCEEEEEEECTTSCEEEEEECSSCEE-EEEECTTTCCEE-ECC-C-SCSHHHHHCC
T ss_pred cCCCCeEEEEEcCCCCCceEeecCCCccccceECCCCCEEEEccCCCeeE-EEEEcCCCCcEE-Ecc-C-CCcChhhhhh
Confidence 4 78999998877643 236789999999999999888888 5 689999998876 443 2 222344445
Q ss_pred -------eecCCCcccEEEEEeCCCcEEEEec
Q 019672 227 -------FGQSMQFQDILVATSSSGSLHVFSP 251 (337)
Q Consensus 227 -------fs~dg~~~~~las~s~dg~v~iw~l 251 (337)
|||||+ ++++++.+++++||++
T Consensus 246 ~~~~~~~~spdg~---~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 246 TAITWLGYLPDGR---LAVVARREGRSAVFID 274 (582)
T ss_dssp SEEEEEEECTTSC---EEEEEEETTEEEEEET
T ss_pred ccccceeEcCCCc---EEEEEEcCCcEEEEEE
Confidence 999998 9999999999999999
No 150
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.78 E-value=1.6e-17 Score=164.36 Aligned_cols=229 Identities=7% Similarity=0.054 Sum_probs=160.7
Q ss_pred CeEEEEEcCCCCEEEEEcCCceEEEeCCCC---cEEE-EEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC
Q 019672 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTG---RLCY-ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g~~vw~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~ 84 (337)
.|.+++|+|||++|++++...+.+||+.++ +... ......+..+.+.++++.+++++ ++.|.+||+.+
T Consensus 110 ~v~~~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~--------~~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR--------GRNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE--------TTEEEEEETTT
T ss_pred CcceeEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe--------CCcEEEEecCC
Confidence 378999999999999988877899999887 4322 12224567778888888888876 35899999998
Q ss_pred CCEEEEEEcCCc-----------------eeEEEEcCCe--EEEEE-CC-------------------------------
Q 019672 85 GTALRELNFLTS-----------------ILAVRLNKKR--LVIVL-RE------------------------------- 113 (337)
Q Consensus 85 ~~~~~~~~~~~~-----------------v~~i~~~~~~--~~v~~-d~------------------------------- 113 (337)
++.......... +..+.|++++ ++++. ++
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 876543322221 4678898765 44443 43
Q ss_pred --eEEEEECCC-CeeeeeecCCCCCceEEEEeeCCCccEEEEcCC---CCccEEEEEEccCCccccc------C---ceE
Q 019672 114 --KTYIYDANT-LAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS---TTKGSVLVYNVMELHSHCE------A---PLA 178 (337)
Q Consensus 114 --~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~---~~dg~v~i~d~~~~~~~~~------~---~i~ 178 (337)
.|++||+.+ ++.........+...+..+++ |++.+|++... ..+..|.+||+.+++.... . .+.
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~ 340 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHETSPTWVPLHN 340 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEEECSSCCCCCS
T ss_pred eeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEcCCCCcCCcCC
Confidence 788999988 765433222123445667777 88888886531 1367899999988764321 1 457
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEEEcC-CCceeEeeccCCcceeEEEE-EeecCCCcccEEE-EEeCCC--cEEEEecCC
Q 019672 179 AIVLSSNGMYIATASEQGTIIRVFLVS-EATKSYSFRRGTYPSTIFSL-SFGQSMQFQDILV-ATSSSG--SLHVFSPGF 253 (337)
Q Consensus 179 ~~~~s~dg~~lat~s~dg~~i~vwd~~-~~~~~~~~~~~~~~~~i~~l-~fs~dg~~~~~la-s~s~dg--~v~iw~l~~ 253 (337)
.++|+|||+++++++.||. ++||.+. +++ +..+..+ ...|.++ +|||||+ .|+ +++.++ +++||+++.
T Consensus 341 ~~~~spdg~~~~~~~~~g~-~~l~~~~~~~~-~~~l~~~--~~~v~~~~~~s~dg~---~l~~~~~~~~~~~~~l~~~~~ 413 (741)
T 2ecf_A 341 SLRFLDDGSILWSSERTGF-QHLYRIDSKGK-AAALTHG--NWSVDELLAVDEKAG---LAYFRAGIESARESQIYAVPL 413 (741)
T ss_dssp CCEECTTSCEEEEECTTSS-CEEEEECSSSC-EEESCCS--SSCEEEEEEEETTTT---EEEEEECSSCTTCBEEEEEET
T ss_pred ceEECCCCeEEEEecCCCc-cEEEEEcCCCC-eeeeeec--ceEEEeEeEEeCCCC---EEEEEEeCCCCceEEEEEEEc
Confidence 8999999999999999987 4788765 444 5555433 3457776 5999998 665 455555 899999864
No 151
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.77 E-value=1.1e-16 Score=139.18 Aligned_cols=208 Identities=10% Similarity=-0.024 Sum_probs=144.2
Q ss_pred ceEEEeCCCCcEEEEE-eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC-CCEEEEEEcC--CceeEEEEcC
Q 019672 29 GFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT-GTALRELNFL--TSILAVRLNK 104 (337)
Q Consensus 29 g~~vw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~-~~~~~~~~~~--~~v~~i~~~~ 104 (337)
.+++||+.+++..... +...+..+.+.++++.+++.+ ++.|.+||+.+ ++.......+ ..+.++.|++
T Consensus 23 ~i~~~d~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~--------~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~sp 94 (297)
T 2ojh_A 23 SIEIFNIRTRKMRVVWQTPELFEAPNWSPDGKYLLLNS--------EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISP 94 (297)
T ss_dssp EEEEEETTTTEEEEEEEESSCCEEEEECTTSSEEEEEE--------TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECT
T ss_pred eEEEEeCCCCceeeeccCCcceEeeEECCCCCEEEEEc--------CCeEEEEeCCCCCCceEeccccccccccceEECC
Confidence 3699999988765332 335577778888888777653 57999999998 8766555443 4678889987
Q ss_pred Ce--EEEEE---C--CeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEcc--CCccc---
Q 019672 105 KR--LVIVL---R--EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVM--ELHSH--- 172 (337)
Q Consensus 105 ~~--~~v~~---d--~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~--~~~~~--- 172 (337)
+. ++++. + ..|.++++.+++ ...+.... ....+.++|++..+++.+. .++.++||++. ++...
T Consensus 95 dg~~l~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~---~~~~~~~spdg~~l~~~~~-~~~~~~l~~~~~~~~~~~~~~ 169 (297)
T 2ojh_A 95 DGALYAISDKVEFGKSAIYLLPSTGGT-PRLMTKNL---PSYWHGWSPDGKSFTYCGI-RDQVFDIYSMDIDSGVETRLT 169 (297)
T ss_dssp TSSEEEEEECTTTSSCEEEEEETTCCC-CEECCSSS---SEEEEEECTTSSEEEEEEE-ETTEEEEEEEETTTCCEEECC
T ss_pred CCCEEEEEEeCCCCcceEEEEECCCCc-eEEeecCC---CccceEECCCCCEEEEEEC-CCCceEEEEEECCCCcceEcc
Confidence 64 44444 1 355556665554 33333222 2556677888888875443 47889999853 33321
Q ss_pred -ccCceEEEEeCCCCCEEEEEe-CCCcEEEEEEcC-CCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCC------
Q 019672 173 -CEAPLAAIVLSSNGMYIATAS-EQGTIIRVFLVS-EATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS------ 243 (337)
Q Consensus 173 -~~~~i~~~~~s~dg~~lat~s-~dg~~i~vwd~~-~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d------ 243 (337)
+...+.+++|+|+|++|+.++ .++. ++||++. .+..+..+.. +...+.+++|+|||+ +|++++.+
T Consensus 170 ~~~~~~~~~~~s~dg~~l~~~~~~~~~-~~i~~~~~~~~~~~~~~~--~~~~~~~~~~s~dg~---~l~~~~~~~~~~~~ 243 (297)
T 2ojh_A 170 HGEGRNDGPDYSPDGRWIYFNSSRTGQ-MQIWRVRVDGSSVERITD--SAYGDWFPHPSPSGD---KVVFVSYDADVFDH 243 (297)
T ss_dssp CSSSCEEEEEECTTSSEEEEEECTTSS-CEEEEEETTSSCEEECCC--CSEEEEEEEECTTSS---EEEEEEEETTCCSC
T ss_pred cCCCccccceECCCCCEEEEEecCCCC-ccEEEECCCCCCcEEEec--CCcccCCeEECCCCC---EEEEEEcCCCCCcc
Confidence 226799999999999888776 4777 5899986 4555555543 345789999999999 89888876
Q ss_pred -----CcEEEEecCCCc
Q 019672 244 -----GSLHVFSPGFAI 255 (337)
Q Consensus 244 -----g~v~iw~l~~~~ 255 (337)
+.|++||++..+
T Consensus 244 ~~~~~~~l~~~d~~~~~ 260 (297)
T 2ojh_A 244 PRDLDVRVQLMDMDGGN 260 (297)
T ss_dssp CSSEEEEEEEEETTSCS
T ss_pred cccCceEEEEEecCCCC
Confidence 569999987654
No 152
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.77 E-value=8.9e-17 Score=146.04 Aligned_cols=243 Identities=12% Similarity=0.073 Sum_probs=153.4
Q ss_pred CCeEEEEEcCCCCEEEEEcCCceEEEeCC-CCcEEEEEe--e-CCEEEEEEccCCCEE-EEEeC-CCCCCC------CCc
Q 019672 8 YPVFFVSFNQDNSGFALSTKDGFKIFDSS-TGRLCYERA--V-GAFSIVEMLYSSSLL-AIVGA-GEQPSL------SPR 75 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~~g~~vw~~~-~~~~~~~~~--~-~~~~~~~~~~~~~~~-~~~~~-g~~~~~------~d~ 75 (337)
..+..++|+|||++|+++..+.+.+|+++ ++++..... . +....+.+.++++.+ ++++. +....+ .++
T Consensus 40 ~~~~~~a~spdg~~l~~~~~~~v~~~~~~~~g~~~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g 119 (365)
T 1jof_A 40 EPISWMTFDHERKNIYGAAMKKWSSFAVKSPTEIVHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAG 119 (365)
T ss_dssp CCCSEEEECTTSSEEEEEEBTEEEEEEEEETTEEEEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCC
T ss_pred CCCcEEEECCCCCEEEEEccceEEEEEECCCCCEEEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCc
Confidence 36778999999998887776788999987 776543221 1 111223334444432 22321 000000 378
Q ss_pred eEEEEECC-CCCEEEEEE-----cCCceeEEEEcCCe--EEEEE--CCeEEEEECC-CCeee--eeecCCCCCceEEEEe
Q 019672 76 RLCLFNTT-TGTALRELN-----FLTSILAVRLNKKR--LVIVL--REKTYIYDAN-TLAIL--DTIDTVPNLKGLCAFS 142 (337)
Q Consensus 76 ~v~iwd~~-~~~~~~~~~-----~~~~v~~i~~~~~~--~~v~~--d~~i~i~d~~-~~~~~--~~~~~~~~~~~~~~~~ 142 (337)
++.+|++. .++....+. ....+.++.+++++ ++++. ++.|++||+. +++.. ..+..+.+..+...+.
T Consensus 120 ~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~ 199 (365)
T 1jof_A 120 YGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVA 199 (365)
T ss_dssp EEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEE
T ss_pred eEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeE
Confidence 99999997 466554443 23478899999875 44444 5699999998 66542 3333221123455667
Q ss_pred eCCCccEEEEcCCCCccEEEEEEcc--CCccc------cc--------C-------ceEEEE-eCCCCCEEEEEeCCCc-
Q 019672 143 PSLNACFLAVPASTTKGSVLVYNVM--ELHSH------CE--------A-------PLAAIV-LSSNGMYIATASEQGT- 197 (337)
Q Consensus 143 ~~~~~~~la~~~~~~dg~v~i~d~~--~~~~~------~~--------~-------~i~~~~-~s~dg~~lat~s~dg~- 197 (337)
++|++.++++++. .++.|.+|++. +++.. .. . .+..++ |+|||++|++++.+..
T Consensus 200 ~spdg~~l~v~~~-~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~~ 278 (365)
T 1jof_A 200 MHPTGNYLYALME-AGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKF 278 (365)
T ss_dssp ECTTSSEEEEEET-TTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESST
T ss_pred ECCCCCEEEEEEC-CCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEEEECCCCCC
Confidence 7888888877653 47899999764 34321 11 1 488999 9999999887765332
Q ss_pred ----EEEEEEcC-CCceeEeec-cCCcceeEEEEEeec---CCCcccEEEEEeCC-CcEEEEecCCC
Q 019672 198 ----IIRVFLVS-EATKSYSFR-RGTYPSTIFSLSFGQ---SMQFQDILVATSSS-GSLHVFSPGFA 254 (337)
Q Consensus 198 ----~i~vwd~~-~~~~~~~~~-~~~~~~~i~~l~fs~---dg~~~~~las~s~d-g~v~iw~l~~~ 254 (337)
.|++|++. +|+...... .......+..++|+| ||+ +|++++.+ ++|+||+++..
T Consensus 279 ~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~---~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 279 ELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDE---WMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTT---EEEEECSSSCEEEEEEEETT
T ss_pred CCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCC---EEEEEEcCCCeEEEEEEchh
Confidence 37999996 666433111 111122345789999 899 89988865 89999998654
No 153
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.77 E-value=8.3e-17 Score=144.06 Aligned_cols=213 Identities=8% Similarity=-0.003 Sum_probs=146.6
Q ss_pred CCceEEEEECCCCCEEEEEEcCC--ceeEEEEcCCe--EEEEE--CCeEEEEECCCCeeeeeecCCCC----CceEEEEe
Q 019672 73 SPRRLCLFNTTTGTALRELNFLT--SILAVRLNKKR--LVIVL--REKTYIYDANTLAILDTIDTVPN----LKGLCAFS 142 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~--~~v~~--d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~ 142 (337)
.+++|.+||..+++.+..+..+. .+..+.+++++ ++++. ++.|.+||+.+++.+..+..... ......+.
T Consensus 19 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~ 98 (349)
T 1jmx_B 19 YPNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA 98 (349)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred CCCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence 48999999999999988888766 67889998764 55554 67999999999988777754322 11133456
Q ss_pred eCCCccEEEEcCCC----------CccEEEEEEccCCcccc-------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcC
Q 019672 143 PSLNACFLAVPAST----------TKGSVLVYNVMELHSHC-------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVS 205 (337)
Q Consensus 143 ~~~~~~~la~~~~~----------~dg~v~i~d~~~~~~~~-------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~ 205 (337)
++|++.++++++.. .++.|.+||+.+++... ...+.+++|+|||+ ++.++. . |++||+.
T Consensus 99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~-l~~~~~--~-i~~~d~~ 174 (349)
T 1jmx_B 99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGS-LYVAGP--D-IYKMDVK 174 (349)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSC-EEEESS--S-EEEECTT
T ss_pred ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCc-EEEccC--c-EEEEeCC
Confidence 67788888877620 03899999998754321 14588999999999 555543 3 6899999
Q ss_pred CCceeEeeccCC-------------------------c-----------------------------------------c
Q 019672 206 EATKSYSFRRGT-------------------------Y-----------------------------------------P 219 (337)
Q Consensus 206 ~~~~~~~~~~~~-------------------------~-----------------------------------------~ 219 (337)
+++.+..+..+. . .
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (349)
T 1jmx_B 175 TGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLT 254 (349)
T ss_dssp TCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECS
T ss_pred CCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCC
Confidence 998776664321 0 0
Q ss_pred eeEEEEEeec-CCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccC
Q 019672 220 STIFSLSFGQ-SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRA 298 (337)
Q Consensus 220 ~~i~~l~fs~-dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~ 298 (337)
..+.+++|+| ||+ +|+++ ++.|++||+++.+.... +. .+.. .+ .+.+.++++
T Consensus 255 ~~~~~~~~sp~dg~---~l~~~--~~~v~~~d~~~~~~~~~-------~~--~~~~---~~----------~~~~s~dg~ 307 (349)
T 1jmx_B 255 ELYFTGLRSPKDPN---QIYGV--LNRLAKYDLKQRKLIKA-------AN--LDHT---YY----------CVAFDKKGD 307 (349)
T ss_dssp SCEEEEEECSSCTT---EEEEE--ESEEEEEETTTTEEEEE-------EE--CSSC---CC----------EEEECSSSS
T ss_pred CcceeeEecCCCCC---EEEEE--cCeEEEEECccCeEEEE-------Ec--CCCC---cc----------ceEECCCCC
Confidence 0245678889 998 88887 88999999976543211 00 0000 01 122345567
Q ss_pred EEEEEEeCCcEEEEEEec
Q 019672 299 SVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 299 ~l~~~~~dg~~~~~~~~~ 316 (337)
+|++++.+|.+++|++++
T Consensus 308 ~l~~~~~~~~v~v~d~~~ 325 (349)
T 1jmx_B 308 KLYLGGTFNDLAVFNPDT 325 (349)
T ss_dssp CEEEESBSSEEEEEETTT
T ss_pred EEEEecCCCeEEEEeccc
Confidence 899888899999997643
No 154
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.76 E-value=2.9e-15 Score=135.46 Aligned_cols=279 Identities=11% Similarity=0.055 Sum_probs=169.4
Q ss_pred cCCCCEEEEEcC-----CceEEEeC--CCCcEEE--EEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC--
Q 019672 16 NQDNSGFALSTK-----DGFKIFDS--STGRLCY--ERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT-- 84 (337)
Q Consensus 16 s~dg~~la~g~~-----~g~~vw~~--~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~-- 84 (337)
.++..++.+|+. .++.+|.+ +++++.. .........+.+.++...++.++... ..++.|.+|++..
T Consensus 10 ~~~~~~~~vg~y~~~~~~~i~~~~~d~~~g~~~~~~~~~~~~p~~l~~spdg~~l~~~~~~~---~~~~~v~~~~~~~~~ 86 (361)
T 3scy_A 10 TDSELTMLVGTYTSGNSKGIYTFRFNEETGESLPLSDAEVANPSYLIPSADGKFVYSVNEFS---KDQAAVSAFAFDKEK 86 (361)
T ss_dssp GGGEEEEEEEECCSSSCCEEEEEEEETTTCCEEEEEEEECSCCCSEEECTTSSEEEEEECCS---STTCEEEEEEEETTT
T ss_pred CCCceEEEEEeccCCCCCCEEEEEEeCCCCCEEEeecccCCCCceEEECCCCCEEEEEEccC---CCCCcEEEEEEeCCC
Confidence 445556777742 35777754 5565432 22333444567777777776665410 0247999998765
Q ss_pred CCE--EEEEE-cCCceeEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeec----CCC-C-------CceEEEEeeCCCc
Q 019672 85 GTA--LRELN-FLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILDTID----TVP-N-------LKGLCAFSPSLNA 147 (337)
Q Consensus 85 ~~~--~~~~~-~~~~v~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~----~~~-~-------~~~~~~~~~~~~~ 147 (337)
++. +.... .......++++.+.++++. ++.+.+|++.....+..+. ... . .....++.++|++
T Consensus 87 g~~~~~~~~~~~~~~p~~~~~dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg 166 (361)
T 3scy_A 87 GTLHLLNTQKTMGADPCYLTTNGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDG 166 (361)
T ss_dssp TEEEEEEEEECSSSCEEEEEECSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTS
T ss_pred CcEEEeeEeccCCCCcEEEEECCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCC
Confidence 433 23333 2345677777666677776 7799999997543332211 000 0 1123456777888
Q ss_pred cEEEEcCCCCccEEEEEEccCCcc--------------c----ccCceEEEEeCCCCCEEEEEeC-CCcEEEEEEcCCCc
Q 019672 148 CFLAVPASTTKGSVLVYNVMELHS--------------H----CEAPLAAIVLSSNGMYIATASE-QGTIIRVFLVSEAT 208 (337)
Q Consensus 148 ~~la~~~~~~dg~v~i~d~~~~~~--------------~----~~~~i~~~~~s~dg~~lat~s~-dg~~i~vwd~~~~~ 208 (337)
.++++++. .++.|.+|++..... . ....+..++|+|||++|++++. ++. |++||+.+++
T Consensus 167 ~~l~~~~~-~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~-v~v~~~~~g~ 244 (361)
T 3scy_A 167 KYLLADDL-GTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGT-VIAFRYADGM 244 (361)
T ss_dssp SEEEEEET-TTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCE-EEEEEEETTE
T ss_pred CEEEEEeC-CCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCe-EEEEEecCCc
Confidence 87766654 478999998864331 0 1155789999999998888874 665 7999998775
Q ss_pred e--eEeeccC-CcceeEEEEEeecCCCcccEEEEEeC--CCcEEEEecCCCcccCCCCcccccccccccccceeeccccc
Q 019672 209 K--SYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSS--SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPAD 283 (337)
Q Consensus 209 ~--~~~~~~~-~~~~~i~~l~fs~dg~~~~~las~s~--dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 283 (337)
. +..+... .+......++|||||+ +|+++.. +++|.||+++...... ..+. .++. ..
T Consensus 245 ~~~~~~~~~~~~~~~~~~~i~~spdg~---~l~v~~~~~~~~i~v~~~~~~~g~~------~~~~-~~~~--------g~ 306 (361)
T 3scy_A 245 LDEIQTVAADTVNAQGSGDIHLSPDGK---YLYASNRLKADGVAIFKVDETNGTL------TKVG-YQLT--------GI 306 (361)
T ss_dssp EEEEEEEESCSSCCCCEEEEEECTTSS---EEEEEECSSSCEEEEEEECTTTCCE------EEEE-EEEC--------SS
T ss_pred eEEeEEEecCCCCCCCcccEEECCCCC---EEEEECCCCCCEEEEEEEcCCCCcE------EEee-EecC--------CC
Confidence 4 2222211 1122367899999999 8866655 4899999996321110 0000 0000 00
Q ss_pred ceeeeeccCCCcccCEEEEEE-eCCcEEEEEEecCCCC
Q 019672 284 HHVLRNAFPAGVKRASVSVIT-YNGYFVEYIFSINNCC 320 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~~~-~dg~~~~~~~~~~~~~ 320 (337)
....+.+.+++++|++++ .++.+.+|.++.+.++
T Consensus 307 ---~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~ 341 (361)
T 3scy_A 307 ---HPRNFIITPNGKYLLVACRDTNVIQIFERDQATGL 341 (361)
T ss_dssp ---CCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCC
T ss_pred ---CCceEEECCCCCEEEEEECCCCCEEEEEEECCCCc
Confidence 001223456668898888 6799999999988776
No 155
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.75 E-value=3e-16 Score=161.34 Aligned_cols=229 Identities=13% Similarity=0.142 Sum_probs=163.8
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcCCc-eEEEeCC--CCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTKDG-FKIFDSS--TGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~~g-~~vw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
.+...+.++.|+++ ..++++..++ .+||.++ ++....-.....+....+.+++..+++.. ++.|.+||
T Consensus 201 ~~~~~v~~~~~s~d-~l~~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~~~~~SpDG~~la~~~--------~~~i~~~d 271 (1045)
T 1k32_A 201 DMSTHVSSPVIVGH-RIYFITDIDGFGQIYSTDLDGKDLRKHTSFTDYYPRHLNTDGRRILFSK--------GGSIYIFN 271 (1045)
T ss_dssp CCSSCCEEEEEETT-EEEEEECTTSSCEEEEEETTSCSCEECCCCCSSCEEEEEESSSCEEEEE--------TTEEEEEC
T ss_pred CCCCcccceEEeCC-EEEEEEeccCceEEEEEeCCCCcceEecCCCCcceeeEcCCCCEEEEEe--------CCEEEEec
Confidence 45678999999998 5566666655 5888654 33322111122334456777777777653 67999999
Q ss_pred CCCCCEEEEEEcC------------CceeEEEEc-CCe--EEEEECCeEEEEECCCCeeeeeecCCCCCc-eEEEEeeCC
Q 019672 82 TTTGTALRELNFL------------TSILAVRLN-KKR--LVIVLREKTYIYDANTLAILDTIDTVPNLK-GLCAFSPSL 145 (337)
Q Consensus 82 ~~~~~~~~~~~~~------------~~v~~i~~~-~~~--~~v~~d~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~ 145 (337)
+...+ +..+..+ ..+.++.|+ |++ ++++.++.+++|++..++... +.. +.. .+..++++
T Consensus 272 ~~~~~-l~~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~~~~i~~~~~~~~~~~~-~~~--~~~~~~~~~~~s- 346 (1045)
T 1k32_A 272 PDTEK-IEKIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVSRGQAFIQDVSGTYVLK-VPE--PLRIRYVRRGGD- 346 (1045)
T ss_dssp TTTCC-EEECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEETTEEEEECTTSSBEEE-CSC--CSCEEEEEECSS-
T ss_pred CCceE-eeeeccCcccccccccccccccceeeecCCCCCEEEEEEcCEEEEEcCCCCceEE-ccC--CCcceEEeeeEc-
Confidence 95544 3344321 258889999 875 555568999999998776543 322 222 56677888
Q ss_pred CccEEEEcCCCCccEEE-EEEccCCccc----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcce
Q 019672 146 NACFLAVPASTTKGSVL-VYNVMELHSH----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPS 220 (337)
Q Consensus 146 ~~~~la~~~~~~dg~v~-i~d~~~~~~~----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~ 220 (337)
++..+++.+. ++.+. +||+.++... +...+..++|||||++||+++.++. |++||+.+++....+.. +..
T Consensus 347 dg~~l~~~s~--~~~l~~~~d~~~~~~~~l~~~~~~~~~~~~SpDG~~la~~~~~~~-v~~~d~~tg~~~~~~~~--~~~ 421 (1045)
T 1k32_A 347 TKVAFIHGTR--EGDFLGIYDYRTGKAEKFEENLGNVFAMGVDRNGKFAVVANDRFE-IMTVDLETGKPTVIERS--REA 421 (1045)
T ss_dssp SEEEEEEEET--TEEEEEEEETTTCCEEECCCCCCSEEEEEECTTSSEEEEEETTSE-EEEEETTTCCEEEEEEC--SSS
T ss_pred CCCeEEEEEC--CCceEEEEECCCCCceEecCCccceeeeEECCCCCEEEEECCCCe-EEEEECCCCceEEeccC--CCC
Confidence 8888888773 67888 9998765432 2367999999999999999999987 68999999987665532 345
Q ss_pred eEEEEEeecCCCcccEEEEEeCCC----------cEEEEecCCCc
Q 019672 221 TIFSLSFGQSMQFQDILVATSSSG----------SLHVFSPGFAI 255 (337)
Q Consensus 221 ~i~~l~fs~dg~~~~~las~s~dg----------~v~iw~l~~~~ 255 (337)
.+.+++|||||+ +|++++.++ .|++||+.++.
T Consensus 422 ~v~~~~~SpDG~---~la~~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 422 MITDFTISDNSR---FIAYGFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp CCCCEEECTTSC---EEEEEEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred CccceEECCCCC---eEEEEecCccccccCCCCCeEEEEECCCCc
Confidence 678899999999 898887754 89999997654
No 156
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.74 E-value=5.9e-16 Score=159.11 Aligned_cols=223 Identities=15% Similarity=0.136 Sum_probs=164.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEeeC-------------CEEEEEEc-cCCCEEEEEeCCCCCCCCC
Q 019672 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVG-------------AFSIVEML-YSSSLLAIVGAGEQPSLSP 74 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~~-------------~~~~~~~~-~~~~~~~~~~~g~~~~~~d 74 (337)
.+...+|+|||++|+.+.+..+.+|++.+.++. ..... .+..+.+. +++..+++++ +
T Consensus 246 ~~~~~~~SpDG~~la~~~~~~i~~~d~~~~~l~-~l~~~~~~~~~~~~~~~~~v~~~~~S~pdG~~la~~~--------~ 316 (1045)
T 1k32_A 246 DYYPRHLNTDGRRILFSKGGSIYIFNPDTEKIE-KIEIGDLESPEDRIISIPSKFAEDFSPLDGDLIAFVS--------R 316 (1045)
T ss_dssp SSCEEEEEESSSCEEEEETTEEEEECTTTCCEE-ECCCCCCCBCCSEEEECGGGGEEEEEECGGGCEEEEE--------T
T ss_pred CcceeeEcCCCCEEEEEeCCEEEEecCCceEee-eeccCcccccccccccccccceeeecCCCCCEEEEEE--------c
Confidence 466789999999999888777899998655443 33221 34556677 7777777765 4
Q ss_pred ceEEEEECCCCCEEEEEEcCC-ceeEEEEcCCeE--EEEE-CCeEE-EEECCCCeeeeeecCCCCCceEEEEeeCCCccE
Q 019672 75 RRLCLFNTTTGTALRELNFLT-SILAVRLNKKRL--VIVL-REKTY-IYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~-~v~~i~~~~~~~--~v~~-d~~i~-i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
+.|.+|+..+++......+.. .+..+.|+ ++- +.+. ++.+. +||+.+++.. .+. .+...+..++++|++.+
T Consensus 317 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~~~~~-~l~--~~~~~~~~~~~SpDG~~ 392 (1045)
T 1k32_A 317 GQAFIQDVSGTYVLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRTGKAE-KFE--ENLGNVFAMGVDRNGKF 392 (1045)
T ss_dssp TEEEEECTTSSBEEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTTCCEE-ECC--CCCCSEEEEEECTTSSE
T ss_pred CEEEEEcCCCCceEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCCCCce-Eec--CCccceeeeEECCCCCE
Confidence 699999998877554333444 67888888 753 3334 45788 8898876543 333 23345667788889999
Q ss_pred EEEcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCC---------cEEEEEEcCCCceeEeecc
Q 019672 150 LAVPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQG---------TIIRVFLVSEATKSYSFRR 215 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg---------~~i~vwd~~~~~~~~~~~~ 215 (337)
|++++ .++.|++||+.+++.. +...+.+++|||||++||+++.++ ..|++||+.+++ +..+..
T Consensus 393 la~~~--~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~ 469 (1045)
T 1k32_A 393 AVVAN--DRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATT 469 (1045)
T ss_dssp EEEEE--TTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSC
T ss_pred EEEEC--CCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeC
Confidence 99887 4889999999887643 336789999999999999988754 247999999887 444532
Q ss_pred CCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 216 GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 216 ~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
+...+.+++|+|||+ +|+.++.++...+|+..
T Consensus 470 --~~~~~~~~~~spdG~---~l~~~s~~~~~~~~~~~ 501 (1045)
T 1k32_A 470 --ENSHDYAPAFDADSK---NLYYLSYRSLDPSPDRV 501 (1045)
T ss_dssp --SSSBEEEEEECTTSC---EEEEEESCCCCCEECSS
T ss_pred --CCcccCCceEcCCCC---EEEEEecccCCcCcchh
Confidence 234578899999999 99999999999999864
No 157
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.74 E-value=1.7e-16 Score=147.69 Aligned_cols=164 Identities=13% Similarity=0.148 Sum_probs=114.6
Q ss_pred ceEEEEECCCCCEEEEEEcCCceeEEEEcC--CeEEEEECCeEEEEECCCCee----------eeeec---CCCCCceEE
Q 019672 75 RRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVLREKTYIYDANTLAI----------LDTID---TVPNLKGLC 139 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~d~~i~i~d~~~~~~----------~~~~~---~~~~~~~~~ 139 (337)
+++++|+.... + ....+..+++++ ..++++..+.+++|+...... +.... .......+.
T Consensus 23 ~~vri~~~~~~-----~-~~~~~n~lavs~~~~~l~~~~~dgv~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 96 (434)
T 2oit_A 23 KKVRIFDSPEE-----L-PKERSSLLAVSNKYGLVFAGGASGLQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIH 96 (434)
T ss_dssp CEEECSCCCSS-----C-CCSCCBCEEEETTTTEEEEEETTEEEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEE
T ss_pred eeEEecCCccc-----c-CCCCccEEEEecCCCEEEEECCCEEEEEEchHhhhhcccccCcccccccCccccccCCCccc
Confidence 46788764311 1 112345555543 445555555699987532100 00000 001223477
Q ss_pred EEeeCCCccEEE----EcCCCCccEEEEEEccCC--------c-----cc---ccCceEEEEeCCC-CCEEEEEeCCCcE
Q 019672 140 AFSPSLNACFLA----VPASTTKGSVLVYNVMEL--------H-----SH---CEAPLAAIVLSSN-GMYIATASEQGTI 198 (337)
Q Consensus 140 ~~~~~~~~~~la----~~~~~~dg~v~i~d~~~~--------~-----~~---~~~~i~~~~~s~d-g~~lat~s~dg~~ 198 (337)
++++++++.+|+ +++ .|+.|+|||+.+. + .. |..+|.+++|+|+ +++||+++.||+
T Consensus 97 ~l~~spdg~~lav~~~sgs--~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~Dg~- 173 (434)
T 2oit_A 97 HLALSCDNLTLSACMMSSE--YGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLADGS- 173 (434)
T ss_dssp EEEECTTSCEEEEEEEETT--TEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEETTSC-
T ss_pred EEEEcCCCCEEEEEEeccC--CCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEECCCe-
Confidence 888899999999 555 5999999998764 1 11 3588999999998 899999999998
Q ss_pred EEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 199 IRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 199 i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
|++||+++++.+.... + +...|.+++|+|+|+ +|++|+.||+|++||++
T Consensus 174 v~iwD~~~~~~~~~~~-~-~~~~v~~v~wspdg~---~lasgs~dg~v~iwd~~ 222 (434)
T 2oit_A 174 IAVLQVTETVKVCATL-P-STVAVTSVCWSPKGK---QLAVGKQNGTVVQYLPT 222 (434)
T ss_dssp EEEEEESSSEEEEEEE-C-GGGCEEEEEECTTSS---CEEEEETTSCEEEECTT
T ss_pred EEEEEcCCCcceeecc-C-CCCceeEEEEcCCCC---EEEEEcCCCcEEEEccC
Confidence 6999999987655442 2 356799999999999 99999999999999987
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.73 E-value=5.2e-17 Score=160.35 Aligned_cols=237 Identities=8% Similarity=0.018 Sum_probs=154.8
Q ss_pred EEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEeeC-----CEEEEEEccCCCEEEEEeCCCC--CCCCCceEEEEECCC
Q 019672 12 FVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVG-----AFSIVEMLYSSSLLAIVGAGEQ--PSLSPRRLCLFNTTT 84 (337)
Q Consensus 12 ~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~g~~--~~~~d~~v~iwd~~~ 84 (337)
+++|+|||++++++.++.+++||+.+++.......+ .+..+.+.++++.+++.+.... ....+++|++||+.+
T Consensus 20 ~~~~s~dg~~~~~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~ 99 (719)
T 1z68_A 20 FPNWISGQEYLHQSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSN 99 (719)
T ss_dssp CCEESSSSEEEEECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTT
T ss_pred ccEECCCCeEEEEcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCC
Confidence 779999997776666556899999998765444322 2566788888888887764100 001268999999999
Q ss_pred CCEEEEEEcCCceeEEEEcCCe--EEEEECCeEEEEECCCCeeeeeecCCCCCceE-----------------EEEeeCC
Q 019672 85 GTALRELNFLTSILAVRLNKKR--LVIVLREKTYIYDANTLAILDTIDTVPNLKGL-----------------CAFSPSL 145 (337)
Q Consensus 85 ~~~~~~~~~~~~v~~i~~~~~~--~~v~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~ 145 (337)
++.+........+..++|+|++ ++.+.++.|++||+.+++....... .....+ .+++++|
T Consensus 100 g~~~~~~~l~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~-~~~~~v~~g~~~~v~~ee~~~~~~~~~wSP 178 (719)
T 1z68_A 100 GEFVRGNELPRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFN-GRENKIFNGIPDWVYEEEMLATKYALWWSP 178 (719)
T ss_dssp TEECCSSCCCSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCC-CBTTTEEESSCCHHHHHHTTCSSCCEEECT
T ss_pred CccccceecCcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecC-CCcCCeEcccccceeeeecccCcccEEECC
Confidence 8763112223568889998875 5555699999999988765433211 111111 2567788
Q ss_pred CccEEEEcCCCC--------------------------------ccEEEEEEccCCccc-------------ccCceEEE
Q 019672 146 NACFLAVPASTT--------------------------------KGSVLVYNVMELHSH-------------CEAPLAAI 180 (337)
Q Consensus 146 ~~~~la~~~~~~--------------------------------dg~v~i~d~~~~~~~-------------~~~~i~~~ 180 (337)
|+..||+.+.+. ...|.+||+.+++.. +...+..+
T Consensus 179 DG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (719)
T 1z68_A 179 NGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWL 258 (719)
T ss_dssp TSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEE
T ss_pred CCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEe
Confidence 898999876311 127899999887642 33678999
Q ss_pred EeCCCCCEEEEEeCCC---cEEEEEE----cCCCceeEeec---cCCcceeEE-----EEEeecCCCcccEEEE--EeCC
Q 019672 181 VLSSNGMYIATASEQG---TIIRVFL----VSEATKSYSFR---RGTYPSTIF-----SLSFGQSMQFQDILVA--TSSS 243 (337)
Q Consensus 181 ~~s~dg~~lat~s~dg---~~i~vwd----~~~~~~~~~~~---~~~~~~~i~-----~l~fs~dg~~~~~las--~s~d 243 (337)
+|||||+++++....+ ..|.+|| +.+++....+. .+ +...+. +++|||||+ .|+. +..+
T Consensus 259 ~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~---~l~~~~~~~~ 334 (719)
T 1z68_A 259 TWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEES-RTGWAGGFFVSTPVFSYDAI---SYYKIFSDKD 334 (719)
T ss_dssp EESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEEC-SSSCSSSSSCCCCEECTTSS---CEEEEEECTT
T ss_pred EEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEeccccc-CCceEccccCCccEECCCCC---eEEEEEEccC
Confidence 9999988777754332 1257899 87776544331 12 222343 689999998 5544 4456
Q ss_pred Cc--EEEEecCC
Q 019672 244 GS--LHVFSPGF 253 (337)
Q Consensus 244 g~--v~iw~l~~ 253 (337)
|. |.+|++..
T Consensus 335 g~~~l~~~~~~~ 346 (719)
T 1z68_A 335 GYKHIHYIKDTV 346 (719)
T ss_dssp SCEEEEEESSCS
T ss_pred CceEEEEEECCC
Confidence 65 55555544
No 159
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.73 E-value=3.4e-14 Score=124.14 Aligned_cols=232 Identities=14% Similarity=0.156 Sum_probs=155.4
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCC-ceEEEeCCCCcEEEEEee--------CCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERAV--------GAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~-g~~vw~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
+-....+++++++|+++++...+ .+.+||.+ ++.+..... .....+.+......+.++..+ .++.
T Consensus 28 ~~~~p~~v~~~~~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~-----~~~~ 101 (286)
T 1q7f_A 28 QFTEPSGVAVNAQNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERS-----PTHQ 101 (286)
T ss_dssp CBSCEEEEEECTTCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECG-----GGCE
T ss_pred ccCCCceEEECCCCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCC-----CCCE
Confidence 33568899999999988877654 57999987 554443321 233344442233334333321 2689
Q ss_pred EEEEECCCCCEEEEEEcC--CceeEEEEcCCe-EEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEE
Q 019672 77 LCLFNTTTGTALRELNFL--TSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (337)
Q Consensus 77 v~iwd~~~~~~~~~~~~~--~~v~~i~~~~~~-~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 151 (337)
|.+|| .+++.+..+... ..+.++++++++ ++++. ++.|.+||.. ++.+..+..........+++.++++.+++
T Consensus 102 i~~~d-~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v 179 (286)
T 1q7f_A 102 IQIYN-QYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFI 179 (286)
T ss_dssp EEEEC-TTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEE
T ss_pred EEEEC-CCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEE
Confidence 99999 567777766543 367889998765 45554 5789999964 55555554322223456677777777666
Q ss_pred EcCCCCccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeCCC-cEEEEEEcCCCceeEeeccCCcceeEEE
Q 019672 152 VPASTTKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASEQG-TIIRVFLVSEATKSYSFRRGTYPSTIFS 224 (337)
Q Consensus 152 ~~~~~~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~dg-~~i~vwd~~~~~~~~~~~~~~~~~~i~~ 224 (337)
+.. .++.|.+||........ ...+..++++|+|+++++...++ . |++||. +++.+..+..+.....+.+
T Consensus 180 ~~~--~~~~i~~~~~~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~-i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 180 SDN--RAHCVKVFNYEGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFN-LTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp EEG--GGTEEEEEETTCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCE-EEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred EEC--CCCEEEEEcCCCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEE-EEEECC-CCCEEEEEcccCCCCccee
Confidence 544 37899999975432111 14688999999999888887775 6 689995 5777766654332334789
Q ss_pred EEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 225 LSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 225 l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
++|+|+|+ ++++ +.+++|+||++..
T Consensus 256 i~~~~~g~---l~vs-~~~~~v~v~~~~~ 280 (286)
T 1q7f_A 256 VALMDDGS---VVLA-SKDYRLYIYRYVQ 280 (286)
T ss_dssp EEEETTTE---EEEE-ETTTEEEEEECSC
T ss_pred EEECCCCc---EEEE-CCCCeEEEEEccc
Confidence 99999998 6666 6789999999754
No 160
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.73 E-value=6e-16 Score=152.62 Aligned_cols=234 Identities=10% Similarity=-0.018 Sum_probs=154.6
Q ss_pred CeEEEEEcCCCCEEEEEcCC----------ceEEEeCCCCcEEEEEe--eC--CEEEEEEccCCCEEEEEeCCCCCCCCC
Q 019672 9 PVFFVSFNQDNSGFALSTKD----------GFKIFDSSTGRLCYERA--VG--AFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~----------g~~vw~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (337)
.|.+++|||||++|+.++.+ .+.+||+++++...-.. .+ .+..+.+.++++.+++++.
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-------- 133 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-------- 133 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET--------
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC--------
Confidence 48999999999999988652 35799999887521111 11 1344567777888888763
Q ss_pred ceEEEEECCCCCEEEEEEcC-Cce------------------eEEEEcCCe--EEEEE-CC-------------------
Q 019672 75 RRLCLFNTTTGTALRELNFL-TSI------------------LAVRLNKKR--LVIVL-RE------------------- 113 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~-~~v------------------~~i~~~~~~--~~v~~-d~------------------- 113 (337)
++|++||..+++.......+ ..+ .++.|+|++ ++.+. ++
T Consensus 134 ~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~ 213 (723)
T 1xfd_A 134 NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTV 213 (723)
T ss_dssp TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCC
T ss_pred CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcc
Confidence 69999999988766544332 222 679998875 44443 32
Q ss_pred ---------------eEEEEECCCCeeeeeecCCC----CCceEEEEeeCCCccEEEEcCC--CCccEEEEEEccCCccc
Q 019672 114 ---------------KTYIYDANTLAILDTIDTVP----NLKGLCAFSPSLNACFLAVPAS--TTKGSVLVYNVMELHSH 172 (337)
Q Consensus 114 ---------------~i~i~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~la~~~~--~~dg~v~i~d~~~~~~~ 172 (337)
.|++||+.+++....+..+. +...+..++++||+.++++... ..+..|.+||+.+++..
T Consensus 214 ~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 214 KPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp EEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred eeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 79999998887545554321 1345667788888888865431 13578999999887643
Q ss_pred cc------Cce----EEEEeCCCCCEEEEE--eCCC----c-EEEEEE-cCCCce--eEeeccCCcceeEE-EEEeecCC
Q 019672 173 CE------APL----AAIVLSSNGMYIATA--SEQG----T-IIRVFL-VSEATK--SYSFRRGTYPSTIF-SLSFGQSM 231 (337)
Q Consensus 173 ~~------~~i----~~~~~s~dg~~lat~--s~dg----~-~i~vwd-~~~~~~--~~~~~~~~~~~~i~-~l~fs~dg 231 (337)
.. ..+ ..++|+|||+.|+.. ..+| . .|.+|| ..+++. ...+..+ ...+. .++|||||
T Consensus 294 ~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~--~~~~~~~~~~spdg 371 (723)
T 1xfd_A 294 KKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSG--DWDVTKILAYDEKG 371 (723)
T ss_dssp EEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCS--SSCEEEEEEEETTT
T ss_pred EEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecC--CeEEEeeeEEcCCC
Confidence 21 233 388999999977754 4565 2 246677 344431 4445432 22344 46999999
Q ss_pred CcccEEEEEeCC---CcEEEEecCCCc
Q 019672 232 QFQDILVATSSS---GSLHVFSPGFAI 255 (337)
Q Consensus 232 ~~~~~las~s~d---g~v~iw~l~~~~ 255 (337)
+ +|+..+.+ +.++||+++...
T Consensus 372 ~---~l~~~~~~~~~~~~~l~~~~~~~ 395 (723)
T 1xfd_A 372 N---KIYFLSTEDLPRRRQLYSANTVG 395 (723)
T ss_dssp T---EEEEEESSSCTTCCEEEEECSST
T ss_pred C---EEEEEEcCCCCcceEEEEEeCCC
Confidence 9 88766555 789999987543
No 161
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.72 E-value=2.4e-15 Score=136.97 Aligned_cols=281 Identities=11% Similarity=-0.048 Sum_probs=166.1
Q ss_pred EEEcCCCCEEEEEcC-Cc---eEEEeCCCCcEEEEEeeCCEE--EEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 13 VSFNQDNSGFALSTK-DG---FKIFDSSTGRLCYERAVGAFS--IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 13 ~~fs~dg~~la~g~~-~g---~~vw~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
.+|+|||++|+.+++ ++ +.+||+++++.......+... ...+.+++..+++++. ++.|.+||+.+++
T Consensus 41 ~~~SpDg~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~~g~ 113 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAFDGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKD-------GRNLMRVDLATLE 113 (388)
T ss_dssp CCBCTTSCEEEEEECTTSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEET-------TTEEEEEETTTCC
T ss_pred ccCCCCCCEEEEEEcCCCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeC-------CCeEEEEECCCCc
Confidence 789999999888776 56 677899888765433222211 2457778888888775 6799999999998
Q ss_pred EEEEEEcCCc-eeEE--EEcCCeEEEE-------------------------ECCeEEEEECCCCeeeeeecCCCCCceE
Q 019672 87 ALRELNFLTS-ILAV--RLNKKRLVIV-------------------------LREKTYIYDANTLAILDTIDTVPNLKGL 138 (337)
Q Consensus 87 ~~~~~~~~~~-v~~i--~~~~~~~~v~-------------------------~d~~i~i~d~~~~~~~~~~~~~~~~~~~ 138 (337)
....+..+.. +... .++++...++ .+..|++||+.+++....... . ..+
T Consensus 114 ~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~--~~~ 190 (388)
T 3pe7_A 114 ENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-N--QWL 190 (388)
T ss_dssp EEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-S--SCE
T ss_pred ceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-C--ccc
Confidence 7766665553 2222 2355543332 125799999998865433322 2 234
Q ss_pred EEEeeCC-CccEEEEcCCCC----ccEEEEEEccCCccc--cc----CceEEEEeCCCCCEEEEEeCC-Cc---EEEEEE
Q 019672 139 CAFSPSL-NACFLAVPASTT----KGSVLVYNVMELHSH--CE----APLAAIVLSSNGMYIATASEQ-GT---IIRVFL 203 (337)
Q Consensus 139 ~~~~~~~-~~~~la~~~~~~----dg~v~i~d~~~~~~~--~~----~~i~~~~~s~dg~~lat~s~d-g~---~i~vwd 203 (337)
..+.++| ++..+++..... ...|.++|+...... .. ..+...+|+|||+.|+..+.+ +. .|++||
T Consensus 191 ~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d 270 (388)
T 3pe7_A 191 GHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSAD 270 (388)
T ss_dssp EEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEEC
T ss_pred cccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEe
Confidence 5666778 888887765311 337888887654322 11 247889999999988765542 22 268999
Q ss_pred cCCCcee--EeeccCCccee---EEEEEeecCCCcccEEEEE---------eCCCcEEEEecCCCcccCCCCcccccccc
Q 019672 204 VSEATKS--YSFRRGTYPST---IFSLSFGQSMQFQDILVAT---------SSSGSLHVFSPGFAINQRRGGRTSSILGS 269 (337)
Q Consensus 204 ~~~~~~~--~~~~~~~~~~~---i~~l~fs~dg~~~~~las~---------s~dg~v~iw~l~~~~~~~~~~~~~~~~~~ 269 (337)
+.+++.. ..+.. .... ...++|||||+ +|+.. ..+..|++||+.++...+-......+..
T Consensus 271 ~~~g~~~~l~~~~~--~~~~~~~~~~~~~spdg~---~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~- 344 (388)
T 3pe7_A 271 PETLENRQLTSMPA--CSHLMSNYDGSLMVGDGS---DAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKV- 344 (388)
T ss_dssp TTTCCEEEEEEECC--EEEEEECTTSSEEEEEEC---CC------------CCCCEEEEEETTTTEEEEEEECCCCCCC-
T ss_pred cCCCceEEEEcCCC--ceeeeecCCCCeEccCCC---cceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccc-
Confidence 9998743 22221 0000 11237999999 77754 4556899999986543110000000000
Q ss_pred cccccceeecccccceeeeeccCCCcccCEEEEEE-eCCcEEEEEEecCCC
Q 019672 270 ILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT-YNGYFVEYIFSINNC 319 (337)
Q Consensus 270 ~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~-~dg~~~~~~~~~~~~ 319 (337)
....... ....+.+.+++++|+..+ .+|...+|.++....
T Consensus 345 ~~~~~~~----------~~~~~~~spDg~~l~~~s~~~g~~~l~~~~l~~~ 385 (388)
T 3pe7_A 345 FEGDRQV----------THPHPSFTPDDKQILFTSDVHGKPALYLATLPES 385 (388)
T ss_dssp BTTBSST----------TCCCCEECTTSSEEEEEECTTSSCEEEEEECCGG
T ss_pred ccccccc----------CCCCccCCCCCCEEEEEecCCCceeEEEEECChh
Confidence 0000000 011122355667777665 488888888876644
No 162
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.72 E-value=5.3e-16 Score=149.48 Aligned_cols=192 Identities=14% Similarity=0.069 Sum_probs=134.3
Q ss_pred CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC-CceeEEEEcCCeEEEEEC-----CeEEEE--
Q 019672 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-TSILAVRLNKKRLVIVLR-----EKTYIY-- 118 (337)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~~i~~~~~~~~v~~d-----~~i~i~-- 118 (337)
..+..+.+.+++..+++++. .|++++||++.+++......++ ..+..+.|+|+.++...+ ....+|
T Consensus 22 ~~~~~~~~~~DG~~la~~s~------~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~ 95 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGF------SEGSVNAYLYDGGETVKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKV 95 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEE------ETTEEEEEEEETTEEEECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEE
T ss_pred cchheeecCCCCCeEEEEEc------cCCceeEEEEcCCCcEeeecccccccccccCCCCeEEEEeccCCCCcceEEEEE
Confidence 45677788889999998875 3889999999766554433444 378899999996555442 344554
Q ss_pred EC-CCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcccc--cCceEEEEeCCCCCEEEEEeCC
Q 019672 119 DA-NTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHC--EAPLAAIVLSSNGMYIATASEQ 195 (337)
Q Consensus 119 d~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~--~~~i~~~~~s~dg~~lat~s~d 195 (337)
++ ..+... .+.... .....++++++++..+++.. ++.+.+||+.+++... ..+-.+++|||||++||+++.+
T Consensus 96 ~~~~~g~~~-~l~~~~-~~~~~~~s~dg~~~~~~s~~---~~~~~l~d~~~g~~~~l~~~~~~~~~~spDG~~la~~~~~ 170 (582)
T 3o4h_A 96 NTSRPGEEQ-RLEAVK-PMRILSGVDTGEAVVFTGAT---EDRVALYALDGGGLRELARLPGFGFVSDIRGDLIAGLGFF 170 (582)
T ss_dssp ETTSTTCCE-ECTTSC-SBEEEEEEECSSCEEEEEEC---SSCEEEEEEETTEEEEEEEESSCEEEEEEETTEEEEEEEE
T ss_pred eccCCCccc-cccCCC-CceeeeeCCCCCeEEEEecC---CCCceEEEccCCcEEEeecCCCceEEECCCCCEEEEEEEc
Confidence 54 122222 333222 23456888887766666654 3445599998876432 2233899999999999988877
Q ss_pred ----CcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCC--cEEEEecCCCcc
Q 019672 196 ----GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG--SLHVFSPGFAIN 256 (337)
Q Consensus 196 ----g~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg--~v~iw~l~~~~~ 256 (337)
+. |++||+.+++.. .+.. +...+.+++|||||+ +|++++.++ .|++||++++..
T Consensus 171 ~~~~~~-i~~~d~~~g~~~-~l~~--~~~~~~~~~~SpDG~---~l~~~~~~~~~~i~~~d~~~~~~ 230 (582)
T 3o4h_A 171 GGGRVS-LFTSNLSSGGLR-VFDS--GEGSFSSASISPGMK---VTAGLETAREARLVTVDPRDGSV 230 (582)
T ss_dssp ETTEEE-EEEEETTTCCCE-EECC--SSCEEEEEEECTTSC---EEEEEECSSCEEEEEECTTTCCE
T ss_pred CCCCeE-EEEEcCCCCCce-Eeec--CCCccccceECCCCC---EEEEccCCCeeEEEEEcCCCCcE
Confidence 55 789999988764 4432 345689999999999 999888888 899999976543
No 163
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.69 E-value=2.5e-14 Score=129.84 Aligned_cols=267 Identities=9% Similarity=0.042 Sum_probs=158.5
Q ss_pred EEEEcC---CceEEEe--CCCCcEEEEEe---e--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC-CCCEEEE
Q 019672 22 FALSTK---DGFKIFD--SSTGRLCYERA---V--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT-TGTALRE 90 (337)
Q Consensus 22 la~g~~---~g~~vw~--~~~~~~~~~~~---~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~-~~~~~~~ 90 (337)
+++|+. +++.+|+ .+++++..... . .....+.+.++...++.++. + .|.+||+. +++....
T Consensus 5 ~~vg~~~~~~~i~~~~~d~~~g~l~~~~~~~~~~~~~~~~~a~spdg~~l~~~~~-------~-~v~~~~~~~~g~~~~~ 76 (365)
T 1jof_A 5 LMIGTWTPPGAIFTVQFDDEKLTCKLIKRTEIPQDEPISWMTFDHERKNIYGAAM-------K-KWSSFAVKSPTEIVHE 76 (365)
T ss_dssp EEEEESSSSCEEEEEEEETTTTEEEEEEEEECCTTCCCSEEEECTTSSEEEEEEB-------T-EEEEEEEEETTEEEEE
T ss_pred EEEEEccCCCcEEEEEEECCCCCEEEeeEEccCCCCCCcEEEECCCCCEEEEEcc-------c-eEEEEEECCCCCEEEe
Confidence 555543 3566554 56676532211 1 23445667777776655543 4 89999987 7766543
Q ss_pred EEc--CCceeEEEEcCCeE--EE--E--------------ECCeEEEEECC-CCeeeeeecC--CCCCceEEEEeeCCCc
Q 019672 91 LNF--LTSILAVRLNKKRL--VI--V--------------LREKTYIYDAN-TLAILDTIDT--VPNLKGLCAFSPSLNA 147 (337)
Q Consensus 91 ~~~--~~~v~~i~~~~~~~--~v--~--------------~d~~i~i~d~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~ 147 (337)
..+ ...+..+.+++++- ++ + .++.+.+|++. +++....+.. ........++.++|++
T Consensus 77 ~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG 156 (365)
T 1jof_A 77 ASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTE 156 (365)
T ss_dssp EEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTS
T ss_pred eEeecCCCCccEEECCCCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCC
Confidence 332 23345577777654 33 2 35689999997 4554433321 1122345566778888
Q ss_pred cEEEEcCCCCccEEEEEEcc-CCccc---------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcC--CCcee---Ee
Q 019672 148 CFLAVPASTTKGSVLVYNVM-ELHSH---------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVS--EATKS---YS 212 (337)
Q Consensus 148 ~~la~~~~~~dg~v~i~d~~-~~~~~---------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~--~~~~~---~~ 212 (337)
.+++++.. .++.|.+||+. +++.. +...+..++|+|||++|+++++.+..|.+|++. +|+.. ..
T Consensus 157 ~~l~~~~~-~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~ 235 (365)
T 1jof_A 157 TYLYSADL-TANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHS 235 (365)
T ss_dssp SEEEEEET-TTTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEE
T ss_pred CEEEEEcC-CCCEEEEEEECCCCCEEEeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccce
Confidence 88777653 36799999997 55431 124588999999999998888643346899765 56542 12
Q ss_pred e---ccCC--cce------eEEEEE-eecCCCcccEEEEEeCC-C-----cEEEEecCCCcccCCCCccccccccccccc
Q 019672 213 F---RRGT--YPS------TIFSLS-FGQSMQFQDILVATSSS-G-----SLHVFSPGFAINQRRGGRTSSILGSILPES 274 (337)
Q Consensus 213 ~---~~~~--~~~------~i~~l~-fs~dg~~~~~las~s~d-g-----~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~ 274 (337)
+ ..+. +.. .+..++ |||||+ +|+++..+ + +|++|+++....... .....+..
T Consensus 236 ~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~---~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~-------~~~~~~~~ 305 (365)
T 1jof_A 236 FPLIPPGIPDRDPETGKGLYRADVCALTFSGK---YMFASSRANKFELQGYIAGFKLRDCGSIEK-------QLFLSPTP 305 (365)
T ss_dssp EESSCTTCCCBCTTTSSBSEEEEEEEECTTSS---EEEEEEEESSTTSCCEEEEEEECTTSCEEE-------EEEEEECS
T ss_pred EEcCCCCcCCcccccccccccccEEEECCCCC---EEEEECCCCCCCCCCeEEEEEECCCCCEEE-------eeeeeecC
Confidence 2 1111 011 478899 999999 87776543 3 899999963211110 00000000
Q ss_pred ceeecccccceeeeeccCCCc---ccCEEEEEEeC-CcEEEEEEecC
Q 019672 275 VNEVLDPADHHVLRNAFPAGV---KRASVSVITYN-GYFVEYIFSIN 317 (337)
Q Consensus 275 ~~~~w~~~~~~~~~~~~~~~~---~~~~l~~~~~d-g~~~~~~~~~~ 317 (337)
.... ..+++.| ++++|++++.+ +.+.+|+++.+
T Consensus 306 ~~~~----------~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 306 TSGG----------HSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp SCCT----------TCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCc----------ccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 0000 0112234 56889888875 99999999876
No 164
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.67 E-value=7.2e-14 Score=125.02 Aligned_cols=234 Identities=8% Similarity=0.033 Sum_probs=158.7
Q ss_pred CCCeEEEEEcCCCCEEEEEcCC-------------------------ceEEEeCCCCcEEEEEee---CCEEEEEEccCC
Q 019672 7 SYPVFFVSFNQDNSGFALSTKD-------------------------GFKIFDSSTGRLCYERAV---GAFSIVEMLYSS 58 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~-------------------------g~~vw~~~~~~~~~~~~~---~~~~~~~~~~~~ 58 (337)
-+.+.+++|+|+|+++++...+ .+.+||.++++++..... .....+++..+.
T Consensus 23 l~~v~~va~d~~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g 102 (329)
T 3fvz_A 23 PGQVSGVALDSKNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDG 102 (329)
T ss_dssp CSCEEEEEECTTCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECTTS
T ss_pred cCCceEEEECCCCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECCCC
Confidence 4679999999999999888766 479999988887654431 234455666566
Q ss_pred CEEEEEeCCCCCCCCCceEEEEECCCCC-EEEEEEc----------CCceeEEEEcC-C-eEEEEE---CCeEEEEECCC
Q 019672 59 SLLAIVGAGEQPSLSPRRLCLFNTTTGT-ALRELNF----------LTSILAVRLNK-K-RLVIVL---REKTYIYDANT 122 (337)
Q Consensus 59 ~~~~~~~~g~~~~~~d~~v~iwd~~~~~-~~~~~~~----------~~~v~~i~~~~-~-~~~v~~---d~~i~i~d~~~ 122 (337)
+++ ++.. .+++|++||..... .+..+.. -.....|++++ + .++++. ++.|++|| .+
T Consensus 103 ~l~-v~d~------~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~-~~ 174 (329)
T 3fvz_A 103 NYW-VTDV------ALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFS-PS 174 (329)
T ss_dssp CEE-EEET------TTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEEC-TT
T ss_pred CEE-EEEC------CCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEc-CC
Confidence 633 3332 47899999986542 4555421 12578899986 3 455554 46899999 56
Q ss_pred CeeeeeecCCCC--------CceEEEEeeCCC-ccEEEEcCCCCccEEEEEEccCCccccc-------CceEEEEeCCCC
Q 019672 123 LAILDTIDTVPN--------LKGLCAFSPSLN-ACFLAVPASTTKGSVLVYNVMELHSHCE-------APLAAIVLSSNG 186 (337)
Q Consensus 123 ~~~~~~~~~~~~--------~~~~~~~~~~~~-~~~la~~~~~~dg~v~i~d~~~~~~~~~-------~~i~~~~~s~dg 186 (337)
++.+..+..... ......++.+++ +.++++.. .++.|++||..+++.... ..+.+++|+| |
T Consensus 175 g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~--~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g 251 (329)
T 3fvz_A 175 GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADR--ENGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-G 251 (329)
T ss_dssp SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEET--TTTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-T
T ss_pred CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEEC--CCCEEEEEECCCCcEEEEEeccccCCCcceeeecC-C
Confidence 666666532211 112445666676 55555444 478999999986654422 5688999999 4
Q ss_pred CEEEEE-------eCCCcEEEEEEcCCCceeEeeccC-CcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 187 MYIATA-------SEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 187 ~~lat~-------s~dg~~i~vwd~~~~~~~~~~~~~-~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
..+++. +.+.+ |++||..+++.+..+... .+......|+|+|+|. ++++...+++|++|+++...
T Consensus 252 ~~~~~~g~~~v~~~~~~~-v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG~---lyvad~~~~~I~~~~~~~~~ 324 (329)
T 3fvz_A 252 FLFAVNGKPYFGDQEPVQ-GFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDGT---VYIGDAHTNTVWKFTLTEKM 324 (329)
T ss_dssp EEEEEECCCCTTCSCCCC-EEEEETTTCCEEEEECCSSSCCSSEEEEEECTTSE---EEEEESSSCCEEEEEEEECS
T ss_pred EEEEeCCCEEeccCCCcE-EEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCCC---EEEEECCCCEEEEEeCCccc
Confidence 333333 33345 689999999998877421 1223478999999998 99999999999999986543
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.67 E-value=3e-15 Score=148.50 Aligned_cols=240 Identities=11% Similarity=0.042 Sum_probs=153.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEeeCC-----EEE--EEEccCCCEEEEEeCCCCC--CCCCceEEE
Q 019672 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVGA-----FSI--VEMLYSSSLLAIVGAGEQP--SLSPRRLCL 79 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~~~~~~g~~~--~~~d~~v~i 79 (337)
...+++|+|||++++++ ++.+++||+.+++.......+. +.. ..+.+++..+++.+..... .+..+.+.+
T Consensus 18 ~~~~~~w~~dg~~~~~~-~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~ 96 (740)
T 4a5s_A 18 KLYSLRWISDHEYLYKQ-ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (740)
T ss_dssp CCCCEEECSSSEEEEEE-TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred cccccEECCCCcEEEEc-CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEE
Confidence 46689999999998887 6668999999987644333221 122 5677888888777641000 011257789
Q ss_pred EECCCCCEEEEEEcCCceeEEEEcCCe--EEEEECCeEEEEECCCCeeeeeecCCCCCceE-----------------EE
Q 019672 80 FNTTTGTALRELNFLTSILAVRLNKKR--LVIVLREKTYIYDANTLAILDTIDTVPNLKGL-----------------CA 140 (337)
Q Consensus 80 wd~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~d~~i~i~d~~~~~~~~~~~~~~~~~~~-----------------~~ 140 (337)
||+++++......+...+....|+|++ ++.+.++.|++||+.+++..+ +....+...+ .+
T Consensus 97 ~d~~~~~~~~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~-lt~~g~~~~~~~g~~~~v~~ee~~~~~~~ 175 (740)
T 4a5s_A 97 YDLNKRQLITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYR-ITWTGKEDIIYNGITDWVYEEEVFSAYSA 175 (740)
T ss_dssp EETTTTEECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEE-CCSCCBTTTEEESBCCHHHHHHTSSSSBC
T ss_pred EECCCCcEEEcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEE-EcCCCCccceecCcccccccchhcCCCcc
Confidence 999998765433345678899999875 555569999999998876443 2221211111 13
Q ss_pred EeeCCCccEEEEcCCC----------------------------------CccEEEEEEccC---C---ccc--------
Q 019672 141 FSPSLNACFLAVPAST----------------------------------TKGSVLVYNVME---L---HSH-------- 172 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~----------------------------------~dg~v~i~d~~~---~---~~~-------- 172 (337)
+.++||+..||+...+ ...+|.+||+.+ + +..
T Consensus 176 ~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~ 255 (740)
T 4a5s_A 176 LWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASM 255 (740)
T ss_dssp EEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHH
T ss_pred eEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccC
Confidence 5677888888876310 112688899988 6 211
Q ss_pred --ccCceEEEEeCCCCCEEEEEeCCC---cEEEEEEcCCCc----ee--Eee-ccCCccee-----EEEEEeecCCCccc
Q 019672 173 --CEAPLAAIVLSSNGMYIATASEQG---TIIRVFLVSEAT----KS--YSF-RRGTYPST-----IFSLSFGQSMQFQD 235 (337)
Q Consensus 173 --~~~~i~~~~~s~dg~~lat~s~dg---~~i~vwd~~~~~----~~--~~~-~~~~~~~~-----i~~l~fs~dg~~~~ 235 (337)
+...+..++|+|||+.++.....+ ..|++||+.+|+ +. .++ ..+ +..- ..+++|||||+
T Consensus 256 ~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~~~-~~~~v~~~~~~~p~fspDG~--- 331 (740)
T 4a5s_A 256 LIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIEMS-TTGWVGRFRPSEPHFTLDGN--- 331 (740)
T ss_dssp HTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEEEC-SSSCSSSSSCCCCEECTTSS---
T ss_pred CCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeeecc-CCceEccCcCCCceEcCCCC---
Confidence 224589999999999777664322 236899999987 22 111 111 1111 23678999999
Q ss_pred EEE-EEeC-CCc--EEEEecCCC
Q 019672 236 ILV-ATSS-SGS--LHVFSPGFA 254 (337)
Q Consensus 236 ~la-s~s~-dg~--v~iw~l~~~ 254 (337)
.|+ ..+. +|. |++|++...
T Consensus 332 ~l~~~~s~~~G~~~l~~~~~~~~ 354 (740)
T 4a5s_A 332 SFYKIISNEEGYRHICYFQIDKK 354 (740)
T ss_dssp EEEEEEECTTSCEEEEEEETTCS
T ss_pred EEEEEEEcCCCceEEEEEECCCC
Confidence 776 6654 454 666776644
No 166
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.65 E-value=4.6e-14 Score=128.47 Aligned_cols=282 Identities=10% Similarity=-0.058 Sum_probs=163.5
Q ss_pred eEEEEEcCCCCEEEEEcCC----ceEEEeCCCCcEEEEEeeCCE-E-EEEEccCCCEEEEEeCCCCCCCCCceEEEEECC
Q 019672 10 VFFVSFNQDNSGFALSTKD----GFKIFDSSTGRLCYERAVGAF-S-IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (337)
Q Consensus 10 v~~~~fs~dg~~la~g~~~----g~~vw~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~ 83 (337)
+.+++|+|||++|+..... .+.+||+.+++.......... . ...+.++++.+++++. ++.|.+||+.
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~-------~~~l~~~d~~ 110 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKN-------ELNLMKVDLE 110 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEET-------TTEEEEEETT
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEc-------CCcEEEEECC
Confidence 6678999999998766543 357789888765432221111 1 1456778888888775 5689999999
Q ss_pred CCCEEEEEEcCCce-eE---EE----------------EcCCe--EEE------EECCeEEEEECCCCeeeeeecCCCCC
Q 019672 84 TGTALRELNFLTSI-LA---VR----------------LNKKR--LVI------VLREKTYIYDANTLAILDTIDTVPNL 135 (337)
Q Consensus 84 ~~~~~~~~~~~~~v-~~---i~----------------~~~~~--~~v------~~d~~i~i~d~~~~~~~~~~~~~~~~ 135 (337)
+++.......+... .. +. ++++. +++ ..+..|++||+.+++....... .
T Consensus 111 ~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~---~ 187 (396)
T 3c5m_A 111 TLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQD---T 187 (396)
T ss_dssp TCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEE---S
T ss_pred CCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccC---C
Confidence 98866555433321 11 11 22221 111 1244799999988765444321 2
Q ss_pred ceEEEEeeCC-CccEEEEcCCCCc----cEEEEEEccCCccc--cc----CceEEEEeCCCCCEEEEEeCC-C---cEEE
Q 019672 136 KGLCAFSPSL-NACFLAVPASTTK----GSVLVYNVMELHSH--CE----APLAAIVLSSNGMYIATASEQ-G---TIIR 200 (337)
Q Consensus 136 ~~~~~~~~~~-~~~~la~~~~~~d----g~v~i~d~~~~~~~--~~----~~i~~~~~s~dg~~lat~s~d-g---~~i~ 200 (337)
..+..+.++| ++..+++...... ..|.+||+...... .. ..+..++|+|||++|+.++.+ + ..|+
T Consensus 188 ~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~ 267 (396)
T 3c5m_A 188 AWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIY 267 (396)
T ss_dssp SCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEEEEEEECTTSSCEEEEEEETTTCCEEEE
T ss_pred cccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccccceEECCCCCEEEEEecCCCCccceEE
Confidence 2344555666 5666665432122 46889998665421 11 247889999999988877654 1 2268
Q ss_pred EEEcCCCceeEeeccCCcceeEEEEEeec-CCCcccEEEEEe----------------CCCcEEEEecCCCcccCCCCcc
Q 019672 201 VFLVSEATKSYSFRRGTYPSTIFSLSFGQ-SMQFQDILVATS----------------SSGSLHVFSPGFAINQRRGGRT 263 (337)
Q Consensus 201 vwd~~~~~~~~~~~~~~~~~~i~~l~fs~-dg~~~~~las~s----------------~dg~v~iw~l~~~~~~~~~~~~ 263 (337)
+||+.+++........ . .. ++|+| ||+ +|+.++ .++.|++||+.++....- ...
T Consensus 268 ~~d~~~g~~~~l~~~~--~--~~-~~~s~~dg~---~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l-~~~ 338 (396)
T 3c5m_A 268 KANPETLENEEVMVMP--P--CS-HLMSNFDGS---LMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSAQKL-CKH 338 (396)
T ss_dssp EECTTTCCEEEEEECC--S--EE-EEEECSSSS---EEEEEECCC----------CCCCCCEEEEEETTTTBCCEE-EEC
T ss_pred EEECCCCCeEEeeeCC--C--CC-CCccCCCCc---eEEEecCCcceeeccccccccCCCCcEEEEecccCceEEc-cCC
Confidence 9999988754322111 1 22 89999 999 888765 346799999876542110 000
Q ss_pred cccccccccccceeecccccceeeeeccCCCcccCEEEEEEe-CCcEEEEEEecCCCC
Q 019672 264 SSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITY-NGYFVEYIFSINNCC 320 (337)
Q Consensus 264 ~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~-dg~~~~~~~~~~~~~ 320 (337)
..-...+.+...... ....+.+++++|+..+. +|...+|.++...+.
T Consensus 339 ~~~~~~~~~~~~~~~----------~~~~~s~dg~~l~~~s~~~~~~~l~~~~~~~~~ 386 (396)
T 3c5m_A 339 STSWDVLDGDRQITH----------PHPSFTPNDDGVLFTSDFEGVPAIYIADVPESY 386 (396)
T ss_dssp CCCCCCBTTBSSTTC----------CCCEECTTSSEEEEEECTTSSCEEEEEECCTTC
T ss_pred CCccccccccccCCC----------CCceEccCCCeEEEEecCCCCceEEEEEEcccc
Confidence 000000000000000 01122455677776664 688889988877665
No 167
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.62 E-value=9.7e-14 Score=125.93 Aligned_cols=223 Identities=9% Similarity=0.088 Sum_probs=146.4
Q ss_pred EEEEcCCCCEEEEEc-----------CCceEEEeCCCCcEEEEEeeC--------CEEEEEEccCCCEEEEEeCCCCCCC
Q 019672 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG--------AFSIVEMLYSSSLLAIVGAGEQPSL 72 (337)
Q Consensus 12 ~~~fs~dg~~la~g~-----------~~g~~vw~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~g~~~~~ 72 (337)
.++|+|||++++++. ++.+.+||+.+++.+...... ....+.+.+++..+.....+
T Consensus 54 ~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~----- 128 (361)
T 2oiz_A 54 HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNAS----- 128 (361)
T ss_dssp EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEES-----
T ss_pred ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCCCcceEEECCCCCEEEEECCC-----
Confidence 789999999988875 234799999998887665432 12345677777776655431
Q ss_pred CCceEEEEECCCCCEEEE-EEcCCceeEEEEcCC---eEEEEE-CCeEEEEECCC-Ceeee------eecCCCCCceEEE
Q 019672 73 SPRRLCLFNTTTGTALRE-LNFLTSILAVRLNKK---RLVIVL-REKTYIYDANT-LAILD------TIDTVPNLKGLCA 140 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~-~~~~~~v~~i~~~~~---~~~v~~-d~~i~i~d~~~-~~~~~------~~~~~~~~~~~~~ 140 (337)
.+++|.+||+.+++.+.+ +..... ..+.+.+. .++... |+++.+|++.. ++... .+.....+. .
T Consensus 129 ~~~~v~v~d~~~~~~~~~~i~~~~~-~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~---~ 204 (361)
T 2oiz_A 129 PATSIGIVDVAKGDYVEDVTAAAGC-WSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPI---F 204 (361)
T ss_dssp SSEEEEEEETTTTEEEEEEGGGTTE-EEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCB---C
T ss_pred CCCeEEEEECCCCcEEEEEecCCCc-ceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCce---E
Confidence 268999999999988877 655432 22334442 233333 88999998854 44431 122211211 1
Q ss_pred EeeCCCccEEEEcCCCCccEEEEEEccCCccc--c-----------c----CceEEEEeCCCCCEEEEEeC---------
Q 019672 141 FSPSLNACFLAVPASTTKGSVLVYNVMELHSH--C-----------E----APLAAIVLSSNGMYIATASE--------- 194 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~--~-----------~----~~i~~~~~s~dg~~lat~s~--------- 194 (337)
+...+++..+++.+ .++.|.++|+...... . . .....++|+||++++..+..
T Consensus 205 ~~~~~~g~~~~~~~--~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~ 282 (361)
T 2oiz_A 205 IAPALDKDKAHFVS--YYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHK 282 (361)
T ss_dssp SCCEECSSEEEEEB--TTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTT
T ss_pred EEecccCCEEEEEe--CCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCccccc
Confidence 11223333444444 3688999998643211 0 0 11223789999888777653
Q ss_pred --CCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 195 --QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 195 --dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
.++ |.+||+.+++.+.++..+. +.+|+|+|||+ +|++++. ++|.|||+++.
T Consensus 283 ~~~~~-v~viD~~t~~~v~~i~~~~----p~~ia~spdg~---~l~v~n~-~~v~v~D~~t~ 335 (361)
T 2oiz_A 283 FPAAE-IWVMDTKTKQRVARIPGRD----ALSMTIDQQRN---LMLTLDG-GNVNVYDISQP 335 (361)
T ss_dssp CCCSE-EEEEETTTTEEEEEEECTT----CCEEEEETTTT---EEEEECS-SCEEEEECSSS
T ss_pred CCCce-EEEEECCCCcEEEEEecCC----eeEEEECCCCC---EEEEeCC-CeEEEEECCCC
Confidence 224 6899999999999886542 78899999999 8988887 99999999876
No 168
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.60 E-value=1.5e-12 Score=116.35 Aligned_cols=225 Identities=11% Similarity=0.040 Sum_probs=156.2
Q ss_pred CeEEEEEcCCCCEEEEEcC-CceEEEeCCCCcEEEEEee-CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 9 PVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~-~g~~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
....+.+.. ++.+++... +.+.+||..+++.+..... .....+.+..+. . ++++.. .++.|.+||.++++
T Consensus 45 ~~~~i~~~~-~~lyv~~~~~~~v~viD~~t~~~~~~i~~~~~p~~i~~~~~g-~-lyv~~~-----~~~~v~~iD~~t~~ 116 (328)
T 3dsm_A 45 VAQSMVIRD-GIGWIVVNNSHVIFAIDINTFKEVGRITGFTSPRYIHFLSDE-K-AYVTQI-----WDYRIFIINPKTYE 116 (328)
T ss_dssp CEEEEEEET-TEEEEEEGGGTEEEEEETTTCCEEEEEECCSSEEEEEEEETT-E-EEEEEB-----SCSEEEEEETTTTE
T ss_pred cceEEEEEC-CEEEEEEcCCCEEEEEECcccEEEEEcCCCCCCcEEEEeCCC-e-EEEEEC-----CCCeEEEEECCCCe
Confidence 356677743 334444443 4579999999988766542 334444554444 3 344431 37899999999999
Q ss_pred EEEEEEcCC------ceeEEEEcCCeEEEEE---CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCC
Q 019672 87 ALRELNFLT------SILAVRLNKKRLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTT 157 (337)
Q Consensus 87 ~~~~~~~~~------~v~~i~~~~~~~~v~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~ 157 (337)
.+.++.... ....+.+..+.++++. ++.|.++|+.+++.+..+.....+.. +..++++.+++++.. .
T Consensus 117 ~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~---i~~~~dG~l~v~~~~-~ 192 (328)
T 3dsm_A 117 ITGYIECPDMDMESGSTEQMVQYGKYVYVNCWSYQNRILKIDTETDKVVDELTIGIQPTS---LVMDKYNKMWTITDG-G 192 (328)
T ss_dssp EEEEEECTTCCTTTCBCCCEEEETTEEEEEECTTCCEEEEEETTTTEEEEEEECSSCBCC---CEECTTSEEEEEBCC-B
T ss_pred EEEEEEcCCccccCCCcceEEEECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccc---eEEcCCCCEEEEECC-C
Confidence 888887655 5667777788888875 67999999999998888876555433 344667776666542 1
Q ss_pred ---------ccEEEEEEccCCccccc------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEe-eccCCccee
Q 019672 158 ---------KGSVLVYNVMELHSHCE------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYS-FRRGTYPST 221 (337)
Q Consensus 158 ---------dg~v~i~d~~~~~~~~~------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~-~~~~~~~~~ 221 (337)
.+.|.++|..+++.... .....++|+||+++|..+.. . |.+||..+++.... +... ....
T Consensus 193 ~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~--~-v~~~d~~t~~~~~~~~~~~-~~~~ 268 (328)
T 3dsm_A 193 YEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN--D-IWRMPVEADRVPVRPFLEF-RDTK 268 (328)
T ss_dssp CTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS--S-EEEEETTCSSCCSSCSBCC-CSSC
T ss_pred ccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc--E-EEEEECCCCceeeeeeecC-CCCc
Confidence 27899999988765432 35899999999999888765 5 57999998876321 1111 1234
Q ss_pred EEEEEeec-CCCcccEEEEE----eCCCcEEEEecC
Q 019672 222 IFSLSFGQ-SMQFQDILVAT----SSSGSLHVFSPG 252 (337)
Q Consensus 222 i~~l~fs~-dg~~~~~las~----s~dg~v~iw~l~ 252 (337)
...++++| ++. ++++. ..+++|.+||.+
T Consensus 269 p~gi~vdp~~g~---lyva~~~~y~~~~~V~v~d~~ 301 (328)
T 3dsm_A 269 YYGLTVNPNNGE---VYVADAIDYQQQGIVYRYSPQ 301 (328)
T ss_dssp EEEEEECTTTCC---EEEEECTTSSSEEEEEEECTT
T ss_pred eEEEEEcCCCCe---EEEEcccccccCCEEEEECCC
Confidence 78899999 555 66776 678999999986
No 169
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.59 E-value=1.3e-12 Score=116.85 Aligned_cols=209 Identities=10% Similarity=0.034 Sum_probs=145.1
Q ss_pred CceEEEeCCCCcEEEEEe-------eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEE
Q 019672 28 DGFKIFDSSTGRLCYERA-------VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAV 100 (337)
Q Consensus 28 ~g~~vw~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i 100 (337)
.++.+||.++++...... .+... -.+.++.+.+.++.. .+++|.+||.++++.+.++........+
T Consensus 17 ~~l~~~d~~t~~~~~~i~~~~n~~~lg~~~-~~i~~~~~~lyv~~~------~~~~v~viD~~t~~~~~~i~~~~~p~~i 89 (328)
T 3dsm_A 17 ATLSYYDPATCEVENEVFYRANGFKLGDVA-QSMVIRDGIGWIVVN------NSHVIFAIDINTFKEVGRITGFTSPRYI 89 (328)
T ss_dssp BEEEEEETTTTEEECSHHHHHHSSCCBSCE-EEEEEETTEEEEEEG------GGTEEEEEETTTCCEEEEEECCSSEEEE
T ss_pred ceEEEEECCCCEEhhhhHhhhcCcccCccc-eEEEEECCEEEEEEc------CCCEEEEEECcccEEEEEcCCCCCCcEE
Confidence 458999999988654321 11111 122234555555544 3789999999999999998766778888
Q ss_pred EEc-CCeEEEEE--CCeEEEEECCCCeeeeeecCCC------CCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc
Q 019672 101 RLN-KKRLVIVL--REKTYIYDANTLAILDTIDTVP------NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS 171 (337)
Q Consensus 101 ~~~-~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~ 171 (337)
.++ .+.++++. ++.|.+||+.+++....+.... .+.++. + +. +.++++... .++.|.++|+.+++.
T Consensus 90 ~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~-~--~~-~~lyv~~~~-~~~~v~viD~~t~~~ 164 (328)
T 3dsm_A 90 HFLSDEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMV-Q--YG-KYVYVNCWS-YQNRILKIDTETDKV 164 (328)
T ss_dssp EEEETTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEE-E--ET-TEEEEEECT-TCCEEEEEETTTTEE
T ss_pred EEeCCCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEE-E--EC-CEEEEEcCC-CCCEEEEEECCCCeE
Confidence 884 45666666 7899999999998887776554 444443 3 22 333333221 268999999998775
Q ss_pred ccc----CceEEEEeCCCCCEEEEEeCC----------CcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEE
Q 019672 172 HCE----APLAAIVLSSNGMYIATASEQ----------GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDIL 237 (337)
Q Consensus 172 ~~~----~~i~~~~~s~dg~~lat~s~d----------g~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~l 237 (337)
..+ .....++++|+|++++++..+ +. |.++|..+++.+..+.... ......++|+||++ +|
T Consensus 165 ~~~i~~g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~-v~~id~~t~~v~~~~~~~~-g~~p~~la~~~d~~---~l 239 (328)
T 3dsm_A 165 VDELTIGIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPS-LYRIDAETFTVEKQFKFKL-GDWPSEVQLNGTRD---TL 239 (328)
T ss_dssp EEEEECSSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCE-EEEEETTTTEEEEEEECCT-TCCCEEEEECTTSC---EE
T ss_pred EEEEEcCCCccceEEcCCCCEEEEECCCccCCccccCCce-EEEEECCCCeEEEEEecCC-CCCceeEEEecCCC---EE
Confidence 543 446789999999987776654 55 6899999998876664321 12467899999998 77
Q ss_pred EEEeCCCcEEEEecCCCc
Q 019672 238 VATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 238 as~s~dg~v~iw~l~~~~ 255 (337)
.++.. +|.+||+++.+
T Consensus 240 yv~~~--~v~~~d~~t~~ 255 (328)
T 3dsm_A 240 YWINN--DIWRMPVEADR 255 (328)
T ss_dssp EEESS--SEEEEETTCSS
T ss_pred EEEcc--EEEEEECCCCc
Confidence 77654 89999987654
No 170
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.57 E-value=7e-14 Score=137.91 Aligned_cols=169 Identities=15% Similarity=0.082 Sum_probs=117.6
Q ss_pred CCceEEEEECCCCCEEEEEEcCC----ceeEEEEcCCe--EEEEEC----------CeEEEEECCCCeeeeeecCCCCCc
Q 019672 73 SPRRLCLFNTTTGTALRELNFLT----SILAVRLNKKR--LVIVLR----------EKTYIYDANTLAILDTIDTVPNLK 136 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~----~v~~i~~~~~~--~~v~~d----------~~i~i~d~~~~~~~~~~~~~~~~~ 136 (337)
.|++|++||..+++....+..+. .+.+++|+|++ ++.+.+ +.|++||+.+++.+...... .
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~ 110 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---R 110 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---S
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---c
Confidence 38899999999999877665543 38899998875 343433 68999999988763211111 1
Q ss_pred eEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccccc------Cce-----------------EEEEeCCCCCEEEEEe
Q 019672 137 GLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCE------APL-----------------AAIVLSSNGMYIATAS 193 (337)
Q Consensus 137 ~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~------~~i-----------------~~~~~s~dg~~lat~s 193 (337)
.+..++++||+..||+.. ++.|++||+.+++.... ..| .+++|||||++||+++
T Consensus 111 ~~~~~~~SPDG~~la~~~---~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 111 PIQYLCWSPVGSKLAYVY---QNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp SBCCEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEE
T ss_pred ccccceECCCCCEEEEEE---CCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEE
Confidence 244566778888999875 68999999987654311 112 4899999999999998
Q ss_pred CCCc---------------------------------EEEEEEcCCCcee--Eeecc----CCcceeEEEEEeecCCCcc
Q 019672 194 EQGT---------------------------------IIRVFLVSEATKS--YSFRR----GTYPSTIFSLSFGQSMQFQ 234 (337)
Q Consensus 194 ~dg~---------------------------------~i~vwd~~~~~~~--~~~~~----~~~~~~i~~l~fs~dg~~~ 234 (337)
.|.. .|++||+.+++.+ ..+.. ..+...+.+++||||++
T Consensus 188 ~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~-- 265 (719)
T 1z68_A 188 FNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER-- 265 (719)
T ss_dssp EECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE--
T ss_pred ECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe--
Confidence 6531 3689999988753 12211 12345689999999987
Q ss_pred cEEEEEeCCC----cEEEEe
Q 019672 235 DILVATSSSG----SLHVFS 250 (337)
Q Consensus 235 ~~las~s~dg----~v~iw~ 250 (337)
++++....+ .|.+||
T Consensus 266 -~~~~~~~~~~~~~~l~~~d 284 (719)
T 1z68_A 266 -VCLQWLKRVQNVSVLSICD 284 (719)
T ss_dssp -EEEEEEESSTTEEEEEEEE
T ss_pred -EEEEEeccccCeEEEEEEc
Confidence 777754332 388888
No 171
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.55 E-value=5.2e-13 Score=121.38 Aligned_cols=239 Identities=11% Similarity=0.014 Sum_probs=144.4
Q ss_pred CeEEEEEcCCCCEEEEEcCC-ceEEEeCCCCcEEEEEee--CCEEEEE--EccCCCEEEEEeCC-CC-------------
Q 019672 9 PVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERAV--GAFSIVE--MLYSSSLLAIVGAG-EQ------------- 69 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~-g~~vw~~~~~~~~~~~~~--~~~~~~~--~~~~~~~~~~~~~g-~~------------- 69 (337)
.+..+.|+|||+.|+.+..+ .+.+||+.+++....... ....... ...+...++..... ..
T Consensus 82 ~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~ 161 (388)
T 3pe7_A 82 NTFGGFLSPDDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEF 161 (388)
T ss_dssp CSSSCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred CccceEEcCCCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhh
Confidence 34467899999999888765 579999999876433322 2222222 24445554432100 00
Q ss_pred -CCCCCceEEEEECCCCCEEEEEEcCCceeEEEEcC-CeEEE--EEC-------CeEEEEECCCCeeeeeecCCCCCceE
Q 019672 70 -PSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNK-KRLVI--VLR-------EKTYIYDANTLAILDTIDTVPNLKGL 138 (337)
Q Consensus 70 -~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~-~~~~v--~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~ 138 (337)
....+..|.+||+.+++..........+..+.|+| ++-.+ +.. ..|.++|+..++. ..+........+
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~-~~l~~~~~~~~~ 240 (388)
T 3pe7_A 162 YFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNM-RKVKTHAEGESC 240 (388)
T ss_dssp GGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCC-EESCCCCTTEEE
T ss_pred hccCCcceEEEEECCCCceEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCce-EEeeeCCCCccc
Confidence 00135789999999998766666666788999999 76433 332 2688888765543 333322222245
Q ss_pred EEEeeCCCccEEEEcCCC---CccEEEEEEccCCcccc--c-Cc-------eEEEEeCCCCCEEEEEe---------CCC
Q 019672 139 CAFSPSLNACFLAVPAST---TKGSVLVYNVMELHSHC--E-AP-------LAAIVLSSNGMYIATAS---------EQG 196 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~---~dg~v~i~d~~~~~~~~--~-~~-------i~~~~~s~dg~~lat~s---------~dg 196 (337)
....++|++..|++.+.. .++.|.+||+.+++... . .. ...++|+|||+.|+... .+.
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 320 (388)
T 3pe7_A 241 THEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDP 320 (388)
T ss_dssp EEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCC
T ss_pred ccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCC
Confidence 566778888877664421 12349999998876321 1 11 22237999999888653 334
Q ss_pred cEEEEEEcCCCceeEeeccCCcc---------eeEEEEEeecCCCcccEEEEEe-CCCcEEEEecCC
Q 019672 197 TIIRVFLVSEATKSYSFRRGTYP---------STIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGF 253 (337)
Q Consensus 197 ~~i~vwd~~~~~~~~~~~~~~~~---------~~i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~~ 253 (337)
. |++||+.+++.. .+..+... ..+.+++|||||+ +|+.++ .+|..+||.++-
T Consensus 321 ~-i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~spDg~---~l~~~s~~~g~~~l~~~~l 382 (388)
T 3pe7_A 321 F-LYVFNMKNGTQH-RVARHDTSWKVFEGDRQVTHPHPSFTPDDK---QILFTSDVHGKPALYLATL 382 (388)
T ss_dssp E-EEEEETTTTEEE-EEEECCCCCCCBTTBSSTTCCCCEECTTSS---EEEEEECTTSSCEEEEEEC
T ss_pred E-EEEEeccCCceE-EeccccCcccccccccccCCCCccCCCCCC---EEEEEecCCCceeEEEEEC
Confidence 4 789999987653 33322110 0367789999999 777665 467788887643
No 172
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.54 E-value=5.3e-12 Score=112.99 Aligned_cols=223 Identities=12% Similarity=0.118 Sum_probs=141.6
Q ss_pred CeEEEEEcCCCCEEEEEcCC---c---eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCC-----------CC
Q 019672 9 PVFFVSFNQDNSGFALSTKD---G---FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQ-----------PS 71 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~---g---~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~-----------~~ 71 (337)
.+.+++|+|||++|+....+ + +.+|++++++.........+..+.+.++++.+++++.... +.
T Consensus 60 ~~~~~~~SpDg~~la~~~~~~~~~~~~l~~~~~~~g~~~~l~~~~~~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~ 139 (347)
T 2gop_A 60 NATMPRISPDGKKIAFMRANEEKKVSEIWVADLETLSSKKILEAKNIRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPA 139 (347)
T ss_dssp SCEEEEECTTSSEEEEEEEETTTTEEEEEEEETTTTEEEEEEEESEEEEEEECTTSSEEEEEEECCCC---------CCC
T ss_pred cCCCeEECCCCCEEEEEEeccCCCcceEEEEECCCCceEEEEcCCCccceeECCCCCEEEEEEccCCCcCCcEEEcccce
Confidence 46789999999998876542 2 5777888876543322222556667777888888763100 00
Q ss_pred ---------CCCceEEEEECCCCCEEEEEEcCCceeEEEEcCCeEEEEE--C------C-eEEEEECCCCeeeeeecCCC
Q 019672 72 ---------LSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL--R------E-KTYIYDANTLAILDTIDTVP 133 (337)
Q Consensus 72 ---------~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~--d------~-~i~i~d~~~~~~~~~~~~~~ 133 (337)
.....|.+||+.+++.+..+..+ .+..+.|++++++++. + . ...||.+.+++. ..+..+
T Consensus 140 ~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~-~~~~~~~spdg~~~~~~~~~~~~~~~~~~~l~~~d~~~~-~~l~~~- 216 (347)
T 2gop_A 140 WFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP-RFSSGIWHRDKIVVNVPHREIIPQYFKFWDIYIWEDGKE-EKMFEK- 216 (347)
T ss_dssp C---------CEEEEEEEETTTTEEEEEEEEE-TTCEEEEETTEEEEEEECCCSSCCSSCCEEEEEEETTEE-EEEEEE-
T ss_pred eecCcccccCccceEEEEECCCCeEEeeecCC-CcccccCCCCeEEEEEecccccccccccccEEEeCCCce-EEeccC-
Confidence 01367999999988764444444 7888999999844433 2 1 334443334443 333222
Q ss_pred CCceEEEEeeCCCccEEEEcCCCC------ccEEEEEEccCCccc-----ccCceEE-EEeCCCCCEEEEEeCCCcEEEE
Q 019672 134 NLKGLCAFSPSLNACFLAVPASTT------KGSVLVYNVMELHSH-----CEAPLAA-IVLSSNGMYIATASEQGTIIRV 201 (337)
Q Consensus 134 ~~~~~~~~~~~~~~~~la~~~~~~------dg~v~i~d~~~~~~~-----~~~~i~~-~~~s~dg~~lat~s~dg~~i~v 201 (337)
.....+ +|++..+++.+... ...|.+|| +++.. +...+.. ++|+ || ++++++.+|. ++|
T Consensus 217 --~~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~-~~l 287 (347)
T 2gop_A 217 --VSFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGS-VNL 287 (347)
T ss_dssp --ESEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTE-EEE
T ss_pred --cceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEeccccCCcccCCccEEc-Cc-EEEEEecCCc-EEE
Confidence 223333 56777777655311 25788888 33321 1256776 9999 98 9999999997 699
Q ss_pred EEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcE-EEEecC
Q 019672 202 FLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSL-HVFSPG 252 (337)
Q Consensus 202 wd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v-~iw~l~ 252 (337)
| +.+++....+ .+ ...|.+++|+| . ++++++.+++. +||.++
T Consensus 288 ~-~~~g~~~~~~-~~--~~~v~~~~~s~--~---~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 288 Y-IWDGEIKPIA-KG--RHWIMGFDVDE--I---VVYLKETATRLRELFTWD 330 (347)
T ss_dssp E-EESSSEEEEE-CS--SSEEEEEEESS--S---EEEEEECSSSCCEEEEES
T ss_pred E-EcCCceEEEe-cC--CCeEEeeeeeC--c---EEEEEcCCCChHHheEeC
Confidence 9 8766653333 22 45689999999 6 78888777765 888876
No 173
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.52 E-value=2.7e-12 Score=127.21 Aligned_cols=173 Identities=16% Similarity=0.095 Sum_probs=119.3
Q ss_pred CceEEEEECCCCCEEEEEEcCC------ceeEEEEcCCe--EEEEEC----------CeEEEEECCCCeeeeeecCCCCC
Q 019672 74 PRRLCLFNTTTGTALRELNFLT------SILAVRLNKKR--LVIVLR----------EKTYIYDANTLAILDTIDTVPNL 135 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~------~v~~i~~~~~~--~~v~~d----------~~i~i~d~~~~~~~~~~~~~~~~ 135 (337)
|++|++||+.++++...+..+. ...++.++|++ +++..+ +.+.+||+.+++... +..+ +
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l~~~--~ 111 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-EERI--P 111 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCC--C
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-cccC--C
Confidence 6799999999999876665443 12346778775 344443 567899999987543 3332 2
Q ss_pred ceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccccc------Cce-----------------EEEEeCCCCCEEEEE
Q 019672 136 KGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCE------APL-----------------AAIVLSSNGMYIATA 192 (337)
Q Consensus 136 ~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~------~~i-----------------~~~~~s~dg~~lat~ 192 (337)
..+...+++||+..||+.. ++.|.+||+.++....- ..+ ..++|||||++||.+
T Consensus 112 ~~~~~~~~SPdG~~la~~~---~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~ 188 (740)
T 4a5s_A 112 NNTQWVTWSPVGHKLAYVW---NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYA 188 (740)
T ss_dssp TTEEEEEECSSTTCEEEEE---TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEE
T ss_pred CcceeeEECCCCCEEEEEE---CCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEE
Confidence 3466777888999999885 68999999987653321 112 358999999999998
Q ss_pred eCCCc-----------------------------------EEEEEEcCC---Cc--eeEeeccC----CcceeEEEEEee
Q 019672 193 SEQGT-----------------------------------IIRVFLVSE---AT--KSYSFRRG----TYPSTIFSLSFG 228 (337)
Q Consensus 193 s~dg~-----------------------------------~i~vwd~~~---~~--~~~~~~~~----~~~~~i~~l~fs 228 (337)
+.|.+ .|++||+.+ ++ ...++... .+...+..++||
T Consensus 189 ~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ws 268 (740)
T 4a5s_A 189 QFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWA 268 (740)
T ss_dssp EEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEE
T ss_pred EEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEe
Confidence 74432 367899988 73 22333221 134568999999
Q ss_pred cCCCcccEEEEEeCC----CcEEEEecCCCc
Q 019672 229 QSMQFQDILVATSSS----GSLHVFSPGFAI 255 (337)
Q Consensus 229 ~dg~~~~~las~s~d----g~v~iw~l~~~~ 255 (337)
|||+ +++..... ..|.+||+.+++
T Consensus 269 pdg~---~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 269 TQER---ISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp ETTE---EEEEEEESSTTEEEEEEEEEETTT
T ss_pred CCCe---EEEEEeCCCCCEEEEEEEECCCCc
Confidence 9998 77766443 379999998765
No 174
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.52 E-value=5.7e-11 Score=113.72 Aligned_cols=230 Identities=15% Similarity=0.097 Sum_probs=154.2
Q ss_pred cCCCCEEEEEcCCc-eEEEeCCCCcEEEEEeeC-CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC--CCCEEEEE
Q 019672 16 NQDNSGFALSTKDG-FKIFDSSTGRLCYERAVG-AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT--TGTALREL 91 (337)
Q Consensus 16 s~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~--~~~~~~~~ 91 (337)
++++.++++...++ +.++|.++++.+.....+ ....+.+.++...+...+ .|+.|.+||+. +++.+.++
T Consensus 164 d~~~~~~V~~~~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~-------~dg~V~viD~~~~t~~~v~~i 236 (567)
T 1qks_A 164 DLENLFSVTLRDAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIG-------RDGKVNMIDLWMKEPTTVAEI 236 (567)
T ss_dssp CGGGEEEEEETTTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEE-------TTSEEEEEETTSSSCCEEEEE
T ss_pred CCCceEEEEeCCCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEc-------CCCeEEEEECCCCCCcEeEEE
Confidence 34444555555544 799999999988776543 334566777777765543 37899999995 88888888
Q ss_pred EcCCceeEEEEc----CC--eEEEEE--CCeEEEEECCCCeeeeeecCCCC---------CceEEEEeeCCCccEEEEcC
Q 019672 92 NFLTSILAVRLN----KK--RLVIVL--REKTYIYDANTLAILDTIDTVPN---------LKGLCAFSPSLNACFLAVPA 154 (337)
Q Consensus 92 ~~~~~v~~i~~~----~~--~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~la~~~ 154 (337)
........+.++ ++ .++++. ++++.++|..+.+.+..+.+... ...+.++..++++..+++.-
T Consensus 237 ~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~ 316 (567)
T 1qks_A 237 KIGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNV 316 (567)
T ss_dssp ECCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEE
T ss_pred ecCCCCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEe
Confidence 877777889998 34 455555 78999999999998888764321 11344455455544444333
Q ss_pred CCCccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeecc-CCcceeEEEEE-
Q 019672 155 STTKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR-GTYPSTIFSLS- 226 (337)
Q Consensus 155 ~~~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~-~~~~~~i~~l~- 226 (337)
. .+|.|.++|..+.+... ......+.|+|||+++.+++.....|.++|+.+++.+..+.. +..+.+-....
T Consensus 317 ~-~~g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~vgg~~Phpg~g~~~ 395 (567)
T 1qks_A 317 K-ETGKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIEDTGGQTPHPGRGANF 395 (567)
T ss_dssp T-TTTEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEECSSSSBCCTTCEEE
T ss_pred c-CCCeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEeccCcCCCCccceee
Confidence 3 58999999987653221 144668899999999888775433478999999998777654 32222111112
Q ss_pred eecCCCcccEEEEEe-CCCcEEEEecCCCc
Q 019672 227 FGQSMQFQDILVATS-SSGSLHVFSPGFAI 255 (337)
Q Consensus 227 fs~dg~~~~~las~s-~dg~v~iw~l~~~~ 255 (337)
++|++. ..++++. .+++|.++|....+
T Consensus 396 ~~p~~g--~v~~t~~~g~~~Vsvid~~~~~ 423 (567)
T 1qks_A 396 VHPTFG--PVWATSHMGDDSVALIGTDPEG 423 (567)
T ss_dssp EETTTE--EEEEEEBSSSSEEEEEECCTTT
T ss_pred ECCCCC--cEEEeCCCCCCeEEEecCCCCC
Confidence 578855 1444443 46899999987643
No 175
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.52 E-value=2.3e-11 Score=105.92 Aligned_cols=170 Identities=11% Similarity=0.142 Sum_probs=118.9
Q ss_pred CCceEEEEECCCCCEEEEEEcC-------CceeEEEE-cC-CeEEEEE---CCeEEEEECCCCeeeeeecCCCCCceEEE
Q 019672 73 SPRRLCLFNTTTGTALRELNFL-------TSILAVRL-NK-KRLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCA 140 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~-------~~v~~i~~-~~-~~~~v~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 140 (337)
.++.|.+||.. ++.+..+... ..+.++++ .+ ..++++. ++.|.+|| .+++.+..+... ......+
T Consensus 49 ~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~-~~~~~~~ 125 (286)
T 1q7f_A 49 NNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIYN-QYGQFVRKFGAT-ILQHPRG 125 (286)
T ss_dssp GGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEEC-TTSCEEEEECTT-TCSCEEE
T ss_pred CCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEEC-CCCcEEEEecCc-cCCCceE
Confidence 37899999987 6666665421 35788888 34 4566665 57999999 566666666432 2223456
Q ss_pred EeeCCCccEEEEcCCCCccEEEEEEccCCccc------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeec
Q 019672 141 FSPSLNACFLAVPASTTKGSVLVYNVMELHSH------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~ 214 (337)
+..++++.++++.. .++.|.+||....... ....+..++++|+|+++++.+.++. |++||. +++.+..+.
T Consensus 126 i~~~~~g~l~v~~~--~~~~i~~~~~~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~~~~~ 201 (286)
T 1q7f_A 126 VTVDNKGRIIVVEC--KVMRVIIFDQNGNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHC-VKVFNY-EGQYLRQIG 201 (286)
T ss_dssp EEECTTSCEEEEET--TTTEEEEECTTSCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTE-EEEEET-TCCEEEEES
T ss_pred EEEeCCCCEEEEEC--CCCEEEEEcCCCCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCE-EEEEcC-CCCEEEEEc
Confidence 67777777766654 3789999996532211 1146899999999998888777776 689997 566666664
Q ss_pred cCCcceeEEEEEeecCCCcccEEEEEeCCC-cEEEEecC
Q 019672 215 RGTYPSTIFSLSFGQSMQFQDILVATSSSG-SLHVFSPG 252 (337)
Q Consensus 215 ~~~~~~~i~~l~fs~dg~~~~~las~s~dg-~v~iw~l~ 252 (337)
.......+..|+++|+|+ ++++...++ .|++|+.+
T Consensus 202 ~~g~~~~p~~i~~d~~G~---l~v~~~~~~~~i~~~~~~ 237 (286)
T 1q7f_A 202 GEGITNYPIGVGINSNGE---ILIADNHNNFNLTIFTQD 237 (286)
T ss_dssp CTTTSCSEEEEEECTTCC---EEEEECSSSCEEEEECTT
T ss_pred cCCccCCCcEEEECCCCC---EEEEeCCCCEEEEEECCC
Confidence 321123578999999998 888888776 99999953
No 176
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.51 E-value=8.1e-12 Score=111.60 Aligned_cols=219 Identities=5% Similarity=0.031 Sum_probs=138.0
Q ss_pred ceEEEEECCCCCEEEEEEcC--CceeEEEEcCCe-EEEEE--CCeEEEEECCCCe-eeeeecC-------CCCCceEEEE
Q 019672 75 RRLCLFNTTTGTALRELNFL--TSILAVRLNKKR-LVIVL--REKTYIYDANTLA-ILDTIDT-------VPNLKGLCAF 141 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~--~~v~~i~~~~~~-~~v~~--d~~i~i~d~~~~~-~~~~~~~-------~~~~~~~~~~ 141 (337)
++|.+||..+++.+..+... ....++++++++ ++++. ++.|++||..... .+..+.. .........+
T Consensus 69 ~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~i 148 (329)
T 3fvz_A 69 DTILVIDPNNAEILQSSGKNLFYLPHGLSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDV 148 (329)
T ss_dssp CCEEEECTTTCCEEEEECTTTCSSEEEEEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEE
T ss_pred CcEEEEECCCCeEEeccCCCccCCceEEEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEE
Confidence 58999999999987666432 267889998765 44444 5799999985442 3444421 1112235566
Q ss_pred eeCC-CccEEEEcCCCCccEEEEEEccCCccccc---------------CceEEEEeCCC-CCEEEEEeCCCcEEEEEEc
Q 019672 142 SPSL-NACFLAVPASTTKGSVLVYNVMELHSHCE---------------APLAAIVLSSN-GMYIATASEQGTIIRVFLV 204 (337)
Q Consensus 142 ~~~~-~~~~la~~~~~~dg~v~i~d~~~~~~~~~---------------~~i~~~~~s~d-g~~lat~s~dg~~i~vwd~ 204 (337)
+.++ ++.++++.+. .++.|++||. ++..... .....++++|+ |+++++...+++ |++||.
T Consensus 149 a~~~~~g~lyv~d~~-~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~-I~~~~~ 225 (329)
T 3fvz_A 149 AVEPSTGAVFVSDGY-CNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGR-IQCFKT 225 (329)
T ss_dssp EECTTTCCEEEEECS-SCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTE-EEEEET
T ss_pred EEeCCCCeEEEEeCC-CCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCE-EEEEEC
Confidence 7777 6666666542 3789999994 3333221 23889999999 777777777776 799999
Q ss_pred CCCceeEeeccCCcceeEEEEEeec------CCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceee
Q 019672 205 SEATKSYSFRRGTYPSTIFSLSFGQ------SMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEV 278 (337)
Q Consensus 205 ~~~~~~~~~~~~~~~~~i~~l~fs~------dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (337)
.+|+.+..+........+.+++|+| +|+ .+++.+.+.+|++|++.+++.... ++. .+..+...
T Consensus 226 ~~G~~~~~~~~~~~~~~~~~~~~~pg~~~~~~g~---~~v~~~~~~~v~~~~~~~g~~~~~-------~~~-~~~~~~~p 294 (329)
T 3fvz_A 226 DTKEFVREIKHASFGRNVFAISYIPGFLFAVNGK---PYFGDQEPVQGFVMNFSSGEIIDV-------FKP-VRKHFDMP 294 (329)
T ss_dssp TTCCEEEEECCTTTTTCEEEEEEETTEEEEEECC---CCTTCSCCCCEEEEETTTCCEEEE-------ECC-SSSCCSSE
T ss_pred CCCcEEEEEeccccCCCcceeeecCCEEEEeCCC---EEeccCCCcEEEEEEcCCCeEEEE-------EcC-CCCccCCe
Confidence 9899888875443445688999999 333 233333445899999876543211 000 00111111
Q ss_pred cccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 279 LDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 279 w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
..++..++++.+++...++.|++|+++..
T Consensus 295 ----------~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 295 ----------HDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp ----------EEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred ----------eEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 12233555556666777899999988754
No 177
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.49 E-value=1.4e-11 Score=109.68 Aligned_cols=232 Identities=11% Similarity=0.050 Sum_probs=145.0
Q ss_pred CCCeEEEEEcCCCCEEEEEc-CCceEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC
Q 019672 7 SYPVFFVSFNQDNSGFALST-KDGFKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~-~~g~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~ 83 (337)
...|.++.|++++..++... +..++.|. ++....... .....+.+..+.+ +.+++. .++.|.+||.+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~-l~~~~~------~~~~i~~~d~~ 74 (333)
T 2dg1_A 5 QQDLPTLFYSGKSNSAVPIISESELQTIT---AEPWLEISKKGLQLEGLNFDRQGQ-LFLLDV------FEGNIFKINPE 74 (333)
T ss_dssp -CCCCBCCSCGGGGCSSCCCCGGGSCEEE---CEEEEEEESSCCCEEEEEECTTSC-EEEEET------TTCEEEEECTT
T ss_pred ccccceeeecCCccceeEEeecccCcccc---cceeEEEeccCccccCcEECCCCC-EEEEEC------CCCEEEEEeCC
Confidence 45689999999987766544 44568883 333333222 2334445554444 333333 47899999999
Q ss_pred CCCEEEEE-EcCCceeEEEEcCCe-EEEEE-C-----CeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCC
Q 019672 84 TGTALREL-NFLTSILAVRLNKKR-LVIVL-R-----EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS 155 (337)
Q Consensus 84 ~~~~~~~~-~~~~~v~~i~~~~~~-~~v~~-d-----~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (337)
+++..... .....+.++.+++++ ++++. . +.|.+||..+++....+........+..+..++++.++++...
T Consensus 75 ~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~ 154 (333)
T 2dg1_A 75 TKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFR 154 (333)
T ss_dssp TCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECC
T ss_pred CCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEecc
Confidence 88765544 344578999998765 55554 3 4899999987754433322222234567777788877765541
Q ss_pred C----CccEEEEEEccCCcccc----cCceEEEEeCCCCCEEEEE-eCCCcEEEEEEcCC-CceeEeec-----cCCcce
Q 019672 156 T----TKGSVLVYNVMELHSHC----EAPLAAIVLSSNGMYIATA-SEQGTIIRVFLVSE-ATKSYSFR-----RGTYPS 220 (337)
Q Consensus 156 ~----~dg~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~lat~-s~dg~~i~vwd~~~-~~~~~~~~-----~~~~~~ 220 (337)
. ..+.|..+|..+++... ...++.++|+|||+.|..+ +.++. |.+||+.+ ++.+..+. ......
T Consensus 155 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~-i~~~d~~~~g~~~~~~~~~~~~~~~~~~ 233 (333)
T 2dg1_A 155 GYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTETTANR-LHRIALEDDGVTIQPFGATIPYYFTGHE 233 (333)
T ss_dssp CBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTE-EEEEEECTTSSSEEEEEEEEEEECCSSS
T ss_pred ccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEeCCCCe-EEEEEecCCCcCcccccceEEEecCCCC
Confidence 0 13567777765443221 1467899999999866544 45665 68999964 44332211 000113
Q ss_pred eEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 221 TIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 221 ~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
.+..++++++|+ ++++...++.|.+||.+
T Consensus 234 ~~~~i~~d~~G~---l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 234 GPDSCCIDSDDN---LYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEEEEBTTCC---EEEEEETTTEEEEECTT
T ss_pred CCCceEECCCCC---EEEEEcCCCEEEEECCC
Confidence 578899999998 88888888999999874
No 178
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.48 E-value=5.1e-12 Score=114.84 Aligned_cols=232 Identities=11% Similarity=-0.008 Sum_probs=139.9
Q ss_pred EEEEcCCCCEEEEEcCCc-eEEEeCCCCcEEEEEee-CCE-EE---EE----------------EccCCCEEEEEeCCCC
Q 019672 12 FVSFNQDNSGFALSTKDG-FKIFDSSTGRLCYERAV-GAF-SI---VE----------------MLYSSSLLAIVGAGEQ 69 (337)
Q Consensus 12 ~~~fs~dg~~la~g~~~g-~~vw~~~~~~~~~~~~~-~~~-~~---~~----------------~~~~~~~~~~~~~g~~ 69 (337)
.+.|+|||++|+.+..++ +.+||+.+++....... ... .. +. +.++.+.+++....
T Consensus 85 ~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~-- 162 (396)
T 3c5m_A 85 GGFISTDERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFY-- 162 (396)
T ss_dssp TCEECTTSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHH--
T ss_pred cceECCCCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeec--
Confidence 368999999998776654 79999988865433221 111 00 00 11111221111100
Q ss_pred CCCCCceEEEEECCCCCEEEEEEcCCceeEEEEcC-Ce--EEEEEC-------CeEEEEECCCCeeeeeecCCCCCceEE
Q 019672 70 PSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNK-KR--LVIVLR-------EKTYIYDANTLAILDTIDTVPNLKGLC 139 (337)
Q Consensus 70 ~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~-~~--~~v~~d-------~~i~i~d~~~~~~~~~~~~~~~~~~~~ 139 (337)
....+..|.+||+.+++..........+..+.|++ +. ++.+.+ ..|.+||+..++.. .+........+.
T Consensus 163 ~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~-~l~~~~~~~~~~ 241 (396)
T 3c5m_A 163 HTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVR-KIKEHAEGESCT 241 (396)
T ss_dssp HTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCE-ESSCCCTTEEEE
T ss_pred cCCCcceEEEEECCCCcEEeeccCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCcee-EeeccCCCcccc
Confidence 00136789999999988766666666788899988 44 334432 36889998765432 232221123455
Q ss_pred EEeeCCCccEEEEcCCC---CccEEEEEEccCCcccc--c-CceEEEEeCC-CCCEEEEEeC----------------CC
Q 019672 140 AFSPSLNACFLAVPAST---TKGSVLVYNVMELHSHC--E-APLAAIVLSS-NGMYIATASE----------------QG 196 (337)
Q Consensus 140 ~~~~~~~~~~la~~~~~---~dg~v~i~d~~~~~~~~--~-~~i~~~~~s~-dg~~lat~s~----------------dg 196 (337)
.+.++|++..|++.+.. ..+.|.+||+.+++... . .... ++|+| ||+++++++. ++
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~ 320 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDP 320 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEE-EEEECSSSSEEEEEECCC----------CCCCCC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCC-CCccCCCCceEEEecCCcceeeccccccccCCCC
Confidence 66777888877766420 12559999998765422 1 2234 89999 9999987652 24
Q ss_pred cEEEEEEcCCCceeEeeccCCcce---------eEEEEEeecCCCcccEEEEEeC-CCcEEEEecC
Q 019672 197 TIIRVFLVSEATKSYSFRRGTYPS---------TIFSLSFGQSMQFQDILVATSS-SGSLHVFSPG 252 (337)
Q Consensus 197 ~~i~vwd~~~~~~~~~~~~~~~~~---------~i~~l~fs~dg~~~~~las~s~-dg~v~iw~l~ 252 (337)
. |++||+.+++.. .+....... .+..++|+|||+ +|+.++. ++...||.++
T Consensus 321 ~-i~~~d~~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~---~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 321 F-LYVLNTKAKSAQ-KLCKHSTSWDVLDGDRQITHPHPSFTPNDD---GVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp E-EEEEETTTTBCC-EEEECCCCCCCBTTBSSTTCCCCEECTTSS---EEEEEECTTSSCEEEEEE
T ss_pred c-EEEEecccCceE-EccCCCCccccccccccCCCCCceEccCCC---eEEEEecCCCCceEEEEE
Confidence 4 689999887643 332221100 145678999999 7776665 5666777654
No 179
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.46 E-value=8.6e-12 Score=121.73 Aligned_cols=232 Identities=11% Similarity=-0.039 Sum_probs=146.8
Q ss_pred CCCCeEEEEEcCCCCEEEEE--cCCc-eEEEeCCCCcEEEEEeeCC--EE---------EEEEc--cCCCE-EEEEeCCC
Q 019672 6 SSYPVFFVSFNQDNSGFALS--TKDG-FKIFDSSTGRLCYERAVGA--FS---------IVEML--YSSSL-LAIVGAGE 68 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g--~~~g-~~vw~~~~~~~~~~~~~~~--~~---------~~~~~--~~~~~-~~~~~~g~ 68 (337)
+...|..++|++++-+++.. ..++ ..||....+........+. +. ...+. ++++. +++++.
T Consensus 22 ~~~~~~~~~~s~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~-- 99 (662)
T 3azo_A 22 RSGRPACVGAVGDEVWWVAPRPAEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHF-- 99 (662)
T ss_dssp TCSCCEEEEEETTEEEEEEEETTTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBT--
T ss_pred cCCccceeEEcCCeEEEEecCcccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEEC--
Confidence 45689999999887667766 4454 5888843333333322221 11 22233 56777 776654
Q ss_pred CCCCCCceEEEEECC--C-CCEEEEEEc------CCceeEEEEcCCe--EEEEE-C----------CeEEEEECCC----
Q 019672 69 QPSLSPRRLCLFNTT--T-GTALRELNF------LTSILAVRLNKKR--LVIVL-R----------EKTYIYDANT---- 122 (337)
Q Consensus 69 ~~~~~d~~v~iwd~~--~-~~~~~~~~~------~~~v~~i~~~~~~--~~v~~-d----------~~i~i~d~~~---- 122 (337)
.+..|.+|++. . ++ ...+.. ...+.++.|++++ ++.+. + ..|++||+.+
T Consensus 100 ----~~~~l~~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 174 (662)
T 3azo_A 100 ----GDQRLYAFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAA 174 (662)
T ss_dssp ----TTCCEEEECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTT
T ss_pred ----CCCeEEEEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCCCccc
Confidence 25678888776 3 44 333332 2357788998874 44444 4 4899999987
Q ss_pred --Ceeeeeec-CCCCCceEEEEeeCCCccEEEEcCCCC------ccEEEEEEcc-CC---ccc-----ccCceEEEEeCC
Q 019672 123 --LAILDTID-TVPNLKGLCAFSPSLNACFLAVPASTT------KGSVLVYNVM-EL---HSH-----CEAPLAAIVLSS 184 (337)
Q Consensus 123 --~~~~~~~~-~~~~~~~~~~~~~~~~~~~la~~~~~~------dg~v~i~d~~-~~---~~~-----~~~~i~~~~~s~ 184 (337)
++. ..+. .. ......++++||+.+|++.+... ...|.+||+. ++ ... +...+..++|+|
T Consensus 175 ~~~~~-~~l~~~~--~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~sp 251 (662)
T 3azo_A 175 DRSAV-RELSDDA--HRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAP 251 (662)
T ss_dssp CGGGS-EESSCSC--SSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECT
T ss_pred cCCce-eEEEecC--CCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECC
Confidence 543 3333 22 23455567788899998766311 1589999998 45 221 136789999999
Q ss_pred CCCEEEEEeCCCc-EEEEEEcCCCceeEeeccCCcce-------eEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 185 NGMYIATASEQGT-IIRVFLVSEATKSYSFRRGTYPS-------TIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 185 dg~~lat~s~dg~-~i~vwd~~~~~~~~~~~~~~~~~-------~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
||+++++++.+|. .|.+||+.+++..... .+.... .+.+++|+|+++ ++++++. ++++||.++
T Consensus 252 dg~l~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~~p~w~~~~~~~~~~~~~~---~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 252 DGSLIVATDRTGWWNLHRVDPATGAATQLC-RREEEFAGPLWTPGMRWFAPLANGL---IAVVHGK-GAAVLGILD 322 (662)
T ss_dssp TSCEEEEECTTSSCEEEEECTTTCCEEESS-CCSSBSSCCCCSTTCCSEEECTTSC---EEEEEBS-SSCEEEEEE
T ss_pred CCeEEEEECCCCCeEEEEEECCCCceeecc-cccccccCccccccCceEeEeCCCE---EEEEEEc-CccEEEEEE
Confidence 9998888888873 1456676677654322 221111 046789999999 9999998 999999554
No 180
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.46 E-value=1.1e-09 Score=95.18 Aligned_cols=227 Identities=4% Similarity=0.012 Sum_probs=147.1
Q ss_pred CCCCCeEEEEEcCCCCEEEEEcC-CceEEEeCCCCcEEE-EEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEE
Q 019672 5 SSSYPVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRLCY-ERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 5 ~~~~~v~~~~fs~dg~~la~g~~-~g~~vw~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iw 80 (337)
.....+.++.++++|+.+++... +++.+||.. ++... ... ......+.+..+.+.. ++.. .++.|..|
T Consensus 12 ~~~~~~~~i~~d~~g~l~v~~~~~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~------~~~~i~~~ 83 (299)
T 2z2n_A 12 NQDTGPYGITVSDKGKVWITQHKANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVW-FTEN------AANKIGRI 83 (299)
T ss_dssp SSSCCEEEEEECTTSCEEEEETTTTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEE-EEET------TTTEEEEE
T ss_pred CcCCCccceEECCCCCEEEEecCCCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEE-EeCC------CCCeEEEE
Confidence 34567999999999998776653 568999988 55432 211 1233444444444433 3332 36789999
Q ss_pred ECCCCCEEEEEEc---CCceeEEEEcCC-eEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcC
Q 019672 81 NTTTGTALRELNF---LTSILAVRLNKK-RLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (337)
Q Consensus 81 d~~~~~~~~~~~~---~~~v~~i~~~~~-~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 154 (337)
|.. ++ ...+.. ...+.++.++++ .+.++. ++.|.+||. +++.. .+...........+..++++.+.++..
T Consensus 84 ~~~-g~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~ 159 (299)
T 2z2n_A 84 TKK-GI-IKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFTEN 159 (299)
T ss_dssp CTT-SC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEEET
T ss_pred CCC-Cc-EEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEEeC
Confidence 986 44 333432 236788989865 455555 568999998 55433 222222223456667777776666554
Q ss_pred CCCccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEee
Q 019672 155 STTKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 228 (337)
Q Consensus 155 ~~~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs 228 (337)
.++.|..||. +++... ...+.+++++++|++.++...++. |.+||. +++.. .+........+.+++++
T Consensus 160 --~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~ 233 (299)
T 2z2n_A 160 --QNNAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNK-IGRITT-SGEIT-EFKIPTPNARPHAITAG 233 (299)
T ss_dssp --TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEE-EEECSSTTCCEEEEEEC
T ss_pred --CCCEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCce-EEEECC-CCcEE-EEECCCCCCCceeEEEC
Confidence 3678999998 544321 155889999999998777666666 689998 66643 23222223458899999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecC
Q 019672 229 QSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 229 ~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
++|+ ++++...++.|.+||..
T Consensus 234 ~~g~---l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 234 AGID---LWFTEWGANKIGRLTSN 254 (299)
T ss_dssp STTC---EEEEETTTTEEEEEETT
T ss_pred CCCC---EEEeccCCceEEEECCC
Confidence 9998 77777678899999973
No 181
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.45 E-value=1.7e-11 Score=105.67 Aligned_cols=229 Identities=7% Similarity=-0.030 Sum_probs=142.7
Q ss_pred CeEEEEEcCCCCEEE-EEcC-CceEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC
Q 019672 9 PVFFVSFNQDNSGFA-LSTK-DGFKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (337)
Q Consensus 9 ~v~~~~fs~dg~~la-~g~~-~g~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~ 84 (337)
...+++++++|++++ +... +++.+|+..+......... .....+.+..+.+ ++++. .++.|.+||...
T Consensus 25 ~p~~i~~~~~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~--l~v~~------~~~~i~~~d~~~ 96 (270)
T 1rwi_B 25 SPSGVAVDSAGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGT--VYVTD------FNNRVVTLAAGS 96 (270)
T ss_dssp CEEEEEECTTCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCC--EEEEE------TTTEEEEECTTC
T ss_pred CccceEECCCCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCC--EEEEc------CCCEEEEEeCCC
Confidence 677899999999766 4343 4578898766543221111 1223344444444 33443 157999999876
Q ss_pred CCEEEEEEcC--CceeEEEEcCCe-EEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCcc
Q 019672 85 GTALRELNFL--TSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG 159 (337)
Q Consensus 85 ~~~~~~~~~~--~~v~~i~~~~~~-~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg 159 (337)
+... .+... ..+.++.+++++ ++++. ++.|.+|+..+.......... .....++..++++.++++.. .++
T Consensus 97 ~~~~-~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~--~~~p~~i~~~~~g~l~v~~~--~~~ 171 (270)
T 1rwi_B 97 NNQT-VLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLPFTG--LNDPDGVAVDNSGNVYVTDT--DNN 171 (270)
T ss_dssp SCCE-ECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECCCCS--CCSCCCEEECTTCCEEEEEG--GGT
T ss_pred ceEe-eeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeecccc--CCCceeEEEeCCCCEEEEEC--CCC
Confidence 5432 23222 467889998664 55554 578999987654332221111 11223445556666555543 368
Q ss_pred EEEEEEccCCccccc-----CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcc
Q 019672 160 SVLVYNVMELHSHCE-----APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQ 234 (337)
Q Consensus 160 ~v~i~d~~~~~~~~~-----~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~ 234 (337)
.|.+||......... ..+.+++++++|.++++...++. |.+||........ +... ....+.+++++|+|+
T Consensus 172 ~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~-v~~~~~~~~~~~~-~~~~-~~~~p~~i~~~~~g~-- 246 (270)
T 1rwi_B 172 RVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQ-VVKLLAGSTTSTV-LPFT-GLNTPLAVAVDSDRT-- 246 (270)
T ss_dssp EEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSC-EEEECTTCSCCEE-CCCC-SCSCEEEEEECTTCC--
T ss_pred EEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCc-EEEEcCCCCccee-eccC-CCCCceeEEECCCCC--
Confidence 899999876543221 56899999999988887777777 5899986654332 2211 123578999999999
Q ss_pred cEEEEEeCCCcEEEEecCCCcc
Q 019672 235 DILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 235 ~~las~s~dg~v~iw~l~~~~~ 256 (337)
++++...+++|++|++...+.
T Consensus 247 -l~v~~~~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 247 -VYVADRGNDRVVKLTSLEHHH 267 (270)
T ss_dssp -EEEEEGGGTEEEEECCCGGGS
T ss_pred -EEEEECCCCEEEEEcCCCccc
Confidence 899999999999999876543
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.45 E-value=3.9e-11 Score=104.55 Aligned_cols=172 Identities=13% Similarity=0.051 Sum_probs=129.6
Q ss_pred CCceEEEEECCCCCEEEEEEcCC--ceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccE
Q 019672 73 SPRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
.++.|.+||.++|+.+.++..+. .+.++.+.+++.+++. ++.|..||. +++.+.++..+. ...+.+..+.+++.+
T Consensus 13 ~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilvs~~~~V~~~d~-~G~~~W~~~~~~-~~~~~~~~~~~dG~~ 90 (276)
T 3no2_A 13 GWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILFSYSKGAKMITR-DGRELWNIAAPA-GCEMQTARILPDGNA 90 (276)
T ss_dssp TCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEEECBSEEEEECT-TSCEEEEEECCT-TCEEEEEEECTTSCE
T ss_pred CCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEEeCCCCEEEECC-CCCEEEEEcCCC-CccccccEECCCCCE
Confidence 58999999999999999988764 5788888777544434 789999998 888988887642 224556677788888
Q ss_pred EEEcCCCCccEEEEEEccCCccccc-----------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCc
Q 019672 150 LAVPASTTKGSVLVYNVMELHSHCE-----------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 218 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~~~-----------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~ 218 (337)
+++.+. .++.|..+|. +++.+.+ .+...+++.++|+++++.+.++. |..||.+ |+.+.++..+
T Consensus 91 lv~~~~-~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~-v~~~d~~-G~~~w~~~~~-- 164 (276)
T 3no2_A 91 LVAWCG-HPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSE-VREIAPN-GQLLNSVKLS-- 164 (276)
T ss_dssp EEEEES-TTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTE-EEEECTT-SCEEEEEECS--
T ss_pred EEEecC-CCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCE-EEEECCC-CCEEEEEECC--
Confidence 876542 1566777775 3433211 24556778999999999999987 5899998 9999988653
Q ss_pred ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 219 PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 219 ~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
..++++.+.++|+ ++++++.++.|..||.++++.
T Consensus 165 -~~~~~~~~~~~g~---~~v~~~~~~~v~~~d~~tG~~ 198 (276)
T 3no2_A 165 -GTPFSSAFLDNGD---CLVACGDAHCFVQLNLESNRI 198 (276)
T ss_dssp -SCCCEEEECTTSC---EEEECBTTSEEEEECTTTCCE
T ss_pred -CCccceeEcCCCC---EEEEeCCCCeEEEEeCcCCcE
Confidence 2345678889998 898888888999999876654
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=7.8e-11 Score=103.23 Aligned_cols=214 Identities=10% Similarity=-0.058 Sum_probs=136.0
Q ss_pred CCeEEEEEcCCCC-EEEEEcCC-ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 8 YPVFFVSFNQDNS-GFALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 8 ~~v~~~~fs~dg~-~la~g~~~-g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
.-..++.|+|+|+ +++++..+ ++.+|+.+++...+.........+.+..+.++++. .. .++.|.+||.+++
T Consensus 28 ~~~eg~~~d~~g~~l~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~dg~l~v~-~~------~~~~i~~~d~~~g 100 (296)
T 3e5z_A 28 TWTEGPVYVPARSAVIFSDVRQNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQGHLIAC-SH------GLRRLERQREPGG 100 (296)
T ss_dssp SSEEEEEEEGGGTEEEEEEGGGTEEEEEETTSCEEEEESSCSSEEEEEECTTCCEEEE-ET------TTTEEEEECSTTC
T ss_pred ccccCCeEeCCCCEEEEEeCCCCEEEEEECCCCeEEEECCCCCcceeeECCCCcEEEE-ec------CCCeEEEEcCCCC
Confidence 3467899999998 66777654 57999998872222222234455555555554332 22 3689999999888
Q ss_pred CEEEEEEc-C----CceeEEEEcCCeEEEEE--------------------CCeEEEEECCCCeeeeeecCCCCCceEEE
Q 019672 86 TALRELNF-L----TSILAVRLNKKRLVIVL--------------------REKTYIYDANTLAILDTIDTVPNLKGLCA 140 (337)
Q Consensus 86 ~~~~~~~~-~----~~v~~i~~~~~~~~v~~--------------------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 140 (337)
+....... . ..+.++.+++++.+.++ .+.|..++.. ++.. .+... ......
T Consensus 101 ~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~--~~~~~g 176 (296)
T 3e5z_A 101 EWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRD--RVKPNG 176 (296)
T ss_dssp CEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECC--CSSEEE
T ss_pred cEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecC--CCCCcc
Confidence 75433221 1 24567888877644443 1356666654 4332 22222 122345
Q ss_pred EeeCCCccEEEEcCCCCccEEEEEEcc-CCcc------c--ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeE
Q 019672 141 FSPSLNACFLAVPASTTKGSVLVYNVM-ELHS------H--CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSY 211 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~~dg~v~i~d~~-~~~~------~--~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~ 211 (337)
++++|++..+++.. .++.|.+||+. ++.. . ....+..++++++|++.++. ++. |.+||.. ++.+.
T Consensus 177 i~~s~dg~~lv~~~--~~~~i~~~~~~~~g~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~-v~~~~~~-g~~~~ 250 (296)
T 3e5z_A 177 LAFLPSGNLLVSDT--GDNATHRYCLNARGETEYQGVHFTVEPGKTDGLRVDAGGLIWASA--GDG-VHVLTPD-GDELG 250 (296)
T ss_dssp EEECTTSCEEEEET--TTTEEEEEEECSSSCEEEEEEEECCSSSCCCSEEEBTTSCEEEEE--TTE-EEEECTT-SCEEE
T ss_pred EEECCCCCEEEEeC--CCCeEEEEEECCCCcCcCCCeEeeCCCCCCCeEEECCCCCEEEEc--CCe-EEEECCC-CCEEE
Confidence 66777887774444 47899999986 3332 1 12446789999999977766 555 6899986 77777
Q ss_pred eeccCCcceeEEEEEe-ecCCCcccEEEEEeCCC
Q 019672 212 SFRRGTYPSTIFSLSF-GQSMQFQDILVATSSSG 244 (337)
Q Consensus 212 ~~~~~~~~~~i~~l~f-s~dg~~~~~las~s~dg 244 (337)
.+... .. +.+++| +|+++ .|.+++.++
T Consensus 251 ~~~~~--~~-~~~~~f~~~d~~---~L~v~t~~~ 278 (296)
T 3e5z_A 251 RVLTP--QT-TSNLCFGGPEGR---TLYMTVSTE 278 (296)
T ss_dssp EEECS--SC-CCEEEEESTTSC---EEEEEETTE
T ss_pred EEECC--CC-ceeEEEECCCCC---EEEEEcCCe
Confidence 76533 22 788999 58988 888888774
No 184
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.43 E-value=4e-10 Score=102.46 Aligned_cols=228 Identities=13% Similarity=0.025 Sum_probs=145.8
Q ss_pred EEEEcCCCCEEEEEc-----------CCceEEEeCCCCcEEEEEeeC---------CEEEEEEccCCCEEEEEeCCCCCC
Q 019672 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG---------AFSIVEMLYSSSLLAIVGAGEQPS 71 (337)
Q Consensus 12 ~~~fs~dg~~la~g~-----------~~g~~vw~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 71 (337)
.+.|+|||+++.++. ++.+.+||..+.+.+...... .-..+.+.+++..+.+....
T Consensus 70 ~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~---- 145 (373)
T 2mad_H 70 NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFA---- 145 (373)
T ss_pred CeEECCCCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecC----
Confidence 789999999988874 345789999988877654332 12345667777777665431
Q ss_pred CCCceEEEEECCCCCEEEE-EEcCCceeEEEEcCCeEEEE--ECCeEEEEECCCCeeeeeec-----CCCCCceE-EEEe
Q 019672 72 LSPRRLCLFNTTTGTALRE-LNFLTSILAVRLNKKRLVIV--LREKTYIYDANTLAILDTID-----TVPNLKGL-CAFS 142 (337)
Q Consensus 72 ~~d~~v~iwd~~~~~~~~~-~~~~~~v~~i~~~~~~~~v~--~d~~i~i~d~~~~~~~~~~~-----~~~~~~~~-~~~~ 142 (337)
.+++|.++| ++++.+.+ +..+..+. +.......+++ .|+++.++|. +++...... ....+... ..+.
T Consensus 146 -~~~~v~viD-~t~~~~~~~i~~~~~~~-~~~~~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~ 221 (373)
T 2mad_H 146 -AGPAVGLVV-QGGSSDDQLLSSPTCYH-IHPGAPSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQA 221 (373)
T ss_pred -CCCeEEEEE-CCCCEEeEEcCCCceEE-EEeCCCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeE
Confidence 257899999 99999888 76655432 22222223332 3889999999 776653332 11111111 1222
Q ss_pred eCCCccEEEEcCCCCccEEEEEEccCCccc--c---------------cCceEEEEeCCCCCEEEEEeCC----------
Q 019672 143 PSLNACFLAVPASTTKGSVLVYNVMELHSH--C---------------EAPLAAIVLSSNGMYIATASEQ---------- 195 (337)
Q Consensus 143 ~~~~~~~la~~~~~~dg~v~i~d~~~~~~~--~---------------~~~i~~~~~s~dg~~lat~s~d---------- 195 (337)
.. +..+++.. ..+.+.+.|+.+.... . ......++++|||++|..+...
T Consensus 222 ~~--~~~~~~~~--~~~~v~vid~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~ 297 (373)
T 2mad_H 222 NK--SGRIVWPV--YSGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAA 297 (373)
T ss_pred ec--CCEEEEEc--CCceEEEEeccCCcceEeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCC
Confidence 22 22333333 2578999998654211 0 0224458899999988776542
Q ss_pred CcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEe-CCCcEEEEecCCCccc
Q 019672 196 GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAINQ 257 (337)
Q Consensus 196 g~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~~~~~~ 257 (337)
+. |.++|+.+++.+.++..+. ...+++|+|||+ ..|.++. .+++|.|+|+.+.+..
T Consensus 298 ~~-V~VID~~t~~vv~~i~~g~---~p~~i~~s~Dg~--~~l~v~~~~~~~V~ViD~~t~~vv 354 (373)
T 2mad_H 298 KE-VTSVTGLVGQTSSQISLGH---DVDAISVAQDGG--PDLYALSAGTEVLHIYDAGAGDQD 354 (373)
T ss_pred Ce-EEEEECCCCEEEEEEECCC---CcCeEEECCCCC--eEEEEEcCCCCeEEEEECCCCCEE
Confidence 34 6899999999988886443 367899999997 1455555 5899999999876653
No 185
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.42 E-value=1.4e-11 Score=120.18 Aligned_cols=242 Identities=12% Similarity=0.009 Sum_probs=140.5
Q ss_pred EccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC-Ccee---------EEEEc--CC--e-EEEEEC--CeEE
Q 019672 54 MLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-TSIL---------AVRLN--KK--R-LVIVLR--EKTY 116 (337)
Q Consensus 54 ~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~---------~i~~~--~~--~-~~v~~d--~~i~ 116 (337)
..++++.++++.... ..+++..||....+.....+..+ ..+. ...++ |+ . ++.+.+ ..|.
T Consensus 29 ~~~s~~~~~~~~~~~---~~~~~~~l~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~SPDg~~~la~~~~~~~~l~ 105 (662)
T 3azo_A 29 VGAVGDEVWWVAPRP---AEAGRATLVRRRADGAEESALPAPWNVRNRVFEYSGFPWAGVPRPAGGPLLVFTHFGDQRLY 105 (662)
T ss_dssp EEEETTEEEEEEEET---TTTTEEEEEEECTTSCEEESSCTTCCBCCCGGGTCCCCEEEECCSSSSCEEEEEBTTTCCEE
T ss_pred eEEcCCeEEEEecCc---ccCCcEEEEEECCCCCcceeCCCCccccccccccCCccceeeeecCCCeEEEEEECCCCeEE
Confidence 334466666665410 13678999985444444444333 3444 45454 43 4 444443 4677
Q ss_pred EEECC--C-CeeeeeecCCC---CCceEEEEeeCCCccEEEEcCCCCc----------cEEEEEEccC------Ccc--c
Q 019672 117 IYDAN--T-LAILDTIDTVP---NLKGLCAFSPSLNACFLAVPASTTK----------GSVLVYNVME------LHS--H 172 (337)
Q Consensus 117 i~d~~--~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~la~~~~~~d----------g~v~i~d~~~------~~~--~ 172 (337)
++++. . ++ ...+.... +......++++||+..|++.+. + ..|.+||+.+ +.. +
T Consensus 106 ~~~~~~~g~~~-~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l 182 (662)
T 3azo_A 106 AFEPDAPGGAV-PRPLTPVSAVGGGLRWADPVLLPERGEVWCMAE--EFTGEGPSDVRRFLAAVPLDGSAAADRSAVREL 182 (662)
T ss_dssp EECTTSTTCCC-CEECSCCCCSTTCEEEEEEEEETTTTEEEEEEE--EECSSSTTCEEEEEEEEETTSTTTTCGGGSEES
T ss_pred EEcCCCCCCCC-CEeccCCccCCCCccccCcEECCCCCEEEEEEe--cccCCCCCCceeEEEEEECCCCccccCCceeEE
Confidence 77765 2 33 33443321 2345567778889989988763 4 5899999987 432 2
Q ss_pred c---cCceEEEEeCCCCCEEEEEeCCC-------cEEEEEEcC-CCc--eeEeeccCCcceeEEEEEeecCCCcccEEEE
Q 019672 173 C---EAPLAAIVLSSNGMYIATASEQG-------TIIRVFLVS-EAT--KSYSFRRGTYPSTIFSLSFGQSMQFQDILVA 239 (337)
Q Consensus 173 ~---~~~i~~~~~s~dg~~lat~s~dg-------~~i~vwd~~-~~~--~~~~~~~~~~~~~i~~l~fs~dg~~~~~las 239 (337)
. ...+..++|||||++||.++.++ ..|++||+. +|+ ....+..+ +...+.+++|||||+ ++++
T Consensus 183 ~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-~~~~~~~~~~spdg~---l~~~ 258 (662)
T 3azo_A 183 SDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-PEEAIAQAEWAPDGS---LIVA 258 (662)
T ss_dssp SCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-TTBCEEEEEECTTSC---EEEE
T ss_pred EecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-CCceEcceEECCCCe---EEEE
Confidence 2 25678899999999999888653 347999998 572 33334322 234688999999999 8999
Q ss_pred EeCCCcEEEE--ecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 240 TSSSGSLHVF--SPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 240 ~s~dg~v~iw--~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
++.+++.+|| |++++......... .....-.|.+... .+.+.+++..+++++. |..++|.++.+
T Consensus 259 ~~~~~~~~l~~~~~~~~~~~~l~~~~--------~~~~~p~w~~~~~-----~~~~~~~~~~~~~~~~-~~~~l~~~d~~ 324 (662)
T 3azo_A 259 TDRTGWWNLHRVDPATGAATQLCRRE--------EEFAGPLWTPGMR-----WFAPLANGLIAVVHGK-GAAVLGILDPE 324 (662)
T ss_dssp ECTTSSCEEEEECTTTCCEEESSCCS--------SBSSCCCCSTTCC-----SEEECTTSCEEEEEBS-SSCEEEEEETT
T ss_pred ECCCCCeEEEEEECCCCceeeccccc--------ccccCccccccCc-----eEeEeCCCEEEEEEEc-CccEEEEEECC
Confidence 9988855555 44333211100000 0000113443211 1222344456666666 88888888765
Q ss_pred CC
Q 019672 318 NC 319 (337)
Q Consensus 318 ~~ 319 (337)
.+
T Consensus 325 ~~ 326 (662)
T 3azo_A 325 SG 326 (662)
T ss_dssp TT
T ss_pred CC
Confidence 44
No 186
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.42 E-value=8.7e-11 Score=115.81 Aligned_cols=239 Identities=8% Similarity=-0.015 Sum_probs=152.5
Q ss_pred CeEEEEEcCCCCEEEEEcC-C-----ceEEEeCCCCcEEEE-EeeCCEEEEEEccCCCEEEEEeCCCCCC---------C
Q 019672 9 PVFFVSFNQDNSGFALSTK-D-----GFKIFDSSTGRLCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPS---------L 72 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~-~-----g~~vw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~---------~ 72 (337)
.+..++|||||++||.+.+ + .+++||+++++.+.. .....+..+.+.+++..+++++....+. .
T Consensus 126 ~~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~ 205 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTN 205 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCC
T ss_pred EEEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccC
Confidence 5889999999999886654 2 369999999976542 2222234467778888888876521100 1
Q ss_pred CCceEEEEECCCCCEE--EEEEc---CCceeEEEEcCCe--EEEEE------CCeEEEEECCC------Ce-eeeeecCC
Q 019672 73 SPRRLCLFNTTTGTAL--RELNF---LTSILAVRLNKKR--LVIVL------REKTYIYDANT------LA-ILDTIDTV 132 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~--~~~~~---~~~v~~i~~~~~~--~~v~~------d~~i~i~d~~~------~~-~~~~~~~~ 132 (337)
....|.+|++.+++.. ..+.. ...+..+.+++++ +++.. +..|++||+.+ +. ....+..+
T Consensus 206 ~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~ 285 (710)
T 2xdw_A 206 LHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDN 285 (710)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECS
T ss_pred CCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCC
Confidence 1345999999887632 22222 2246788888765 44433 35899999976 42 23444433
Q ss_pred CCCceEEEEeeCCCccEEEEcCCC--CccEEEEEEccCCcc-----c--cc--CceEEEEeCCCCCEEEEEeCCCcE-EE
Q 019672 133 PNLKGLCAFSPSLNACFLAVPAST--TKGSVLVYNVMELHS-----H--CE--APLAAIVLSSNGMYIATASEQGTI-IR 200 (337)
Q Consensus 133 ~~~~~~~~~~~~~~~~~la~~~~~--~dg~v~i~d~~~~~~-----~--~~--~~i~~~~~s~dg~~lat~s~dg~~-i~ 200 (337)
.... ...+++ ++..+++.+.. ..+.|.+||+.++.. + +. ..+..++|++++.+++++..||.. |+
T Consensus 286 ~~~~-~~~~s~--dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~ 362 (710)
T 2xdw_A 286 FEGE-YDYVTN--EGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQ 362 (710)
T ss_dssp SSSC-EEEEEE--ETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCEEEEEEEETTTEEEEEEEETTEEEEE
T ss_pred CCcE-EEEEec--cCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEE
Confidence 3222 223444 44454443321 145799999987631 1 11 258889999888889999988853 46
Q ss_pred EEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEE-eC---CCcEEEEecCCCc
Q 019672 201 VFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT-SS---SGSLHVFSPGFAI 255 (337)
Q Consensus 201 vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~-s~---dg~v~iw~l~~~~ 255 (337)
+||+.+|+.+..+... ...+..++++|+++ .++.. +. .++|++||+.+++
T Consensus 363 ~~~~~~g~~~~~l~~~--~~~v~~~~~s~d~~---~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 363 LHDLATGALLKIFPLE--VGSVVGYSGQKKDT---EIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp EEETTTCCEEEEECCC--SSEEEEEECCTTCS---EEEEEEECSSCCCEEEEEETTSSS
T ss_pred EEECCCCCEEEecCCC--CceEEEEecCCCCC---EEEEEEeCCCCCCEEEEEECCCCc
Confidence 7788788877766532 45688899999997 55533 33 3689999997654
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.41 E-value=3.4e-10 Score=100.71 Aligned_cols=225 Identities=10% Similarity=-0.002 Sum_probs=139.5
Q ss_pred CCCeEEEEEcCCCCEEEEEcCC-ceEEEeCCCCcEEEEE--eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECC
Q 019672 7 SYPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTT 83 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~-g~~vw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~ 83 (337)
...+.+++|+++|++++++..+ ++.+||.++++..... ....+..+.+..+.++++...... ...+.|.+||.+
T Consensus 44 ~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~---~~~~~i~~~d~~ 120 (333)
T 2dg1_A 44 GLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF---KSTGGIFAATEN 120 (333)
T ss_dssp CCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS---SSCCEEEEECTT
T ss_pred CccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC---CCCceEEEEeCC
Confidence 3457899999999987777765 5899999888764332 223455555555555433322200 012689999998
Q ss_pred CCCEEEEEE---cCCceeEEEEcCCe-EEEEEC--------CeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEE
Q 019672 84 TGTALRELN---FLTSILAVRLNKKR-LVIVLR--------EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (337)
Q Consensus 84 ~~~~~~~~~---~~~~v~~i~~~~~~-~~v~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 151 (337)
+++....+. ....+.++.+++++ ++++.. +.|..+|..+++....... ......+.+++++..++
T Consensus 121 ~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~---~~~~~~i~~~~dg~~l~ 197 (333)
T 2dg1_A 121 GDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN---ISVANGIALSTDEKVLW 197 (333)
T ss_dssp SCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE---ESSEEEEEECTTSSEEE
T ss_pred CCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC---CCcccceEECCCCCEEE
Confidence 877543332 22368889998765 444432 3566666654443322111 11234566677776554
Q ss_pred EcCCCCccEEEEEEccC-Cccc--------c--c--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCc
Q 019672 152 VPASTTKGSVLVYNVME-LHSH--------C--E--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTY 218 (337)
Q Consensus 152 ~~~~~~dg~v~i~d~~~-~~~~--------~--~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~ 218 (337)
++.. .++.|.+||+.+ +... . . ..+..++++++|++.++...++. |.+||. +++.+..+.....
T Consensus 198 v~~~-~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~-v~~~d~-~g~~~~~~~~~~~ 274 (333)
T 2dg1_A 198 VTET-TANRLHRIALEDDGVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGR-VLVFNK-RGYPIGQILIPGR 274 (333)
T ss_dssp EEEG-GGTEEEEEEECTTSSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTE-EEEECT-TSCEEEEEECTTG
T ss_pred EEeC-CCCeEEEEEecCCCcCcccccceEEEecCCCCCCCceEECCCCCEEEEEcCCCE-EEEECC-CCCEEEEEEcCCC
Confidence 4432 368999999863 2211 0 1 25788999999998888877776 589998 5676666643211
Q ss_pred ----ceeEEEEEeecCCCcccEEEEEeCC
Q 019672 219 ----PSTIFSLSFGQSMQFQDILVATSSS 243 (337)
Q Consensus 219 ----~~~i~~l~fs~dg~~~~~las~s~d 243 (337)
...+.+++|+||++ .|..++.+
T Consensus 275 ~~g~~~~~~~~~~~~dg~---~L~v~~~~ 300 (333)
T 2dg1_A 275 DEGHMLRSTHPQFIPGTN---QLIICSND 300 (333)
T ss_dssp GGTCSCBCCEEEECTTSC---EEEEEEEC
T ss_pred ccccccCcceEEECCCCC---EEEEEeCc
Confidence 01478899999987 66655555
No 188
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.40 E-value=5e-11 Score=108.00 Aligned_cols=265 Identities=11% Similarity=0.062 Sum_probs=158.4
Q ss_pred CCCCEEEEEc-------CCceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCC---CCCCCCceEEEEECCCCC
Q 019672 17 QDNSGFALST-------KDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGE---QPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 17 ~dg~~la~g~-------~~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~d~~v~iwd~~~~~ 86 (337)
++++++.+.. ++.+.+||..+++++.....+....+.+.++...+..+.... ..+..+++|.+||..+++
T Consensus 13 ~~~~~~yv~~~~~~~~~d~~v~v~D~~t~~~~~~i~~g~~p~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~ 92 (361)
T 2oiz_A 13 PQENRIYVMDSVFMHLTESRVHVYDYTNGKFLGMVPTAFNGHVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLT 92 (361)
T ss_dssp CGGGEEEEEECCGGGGGGCEEEEEETTTCCEEEEEECCEEEEEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCC
T ss_pred CCCCEEEEECCCCCccccCeEEEEECCCCeEEEEecCCCCCceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCc
Confidence 4666665543 335799999999887666544444667777777776654100 000126789999999999
Q ss_pred EEEEEEcC-------CceeEEEEcCC--eEEEEE---CCeEEEEECCCCeeeee-ecCCCCCceEEEEeeCCCccEEEEc
Q 019672 87 ALRELNFL-------TSILAVRLNKK--RLVIVL---REKTYIYDANTLAILDT-IDTVPNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 87 ~~~~~~~~-------~~v~~i~~~~~--~~~v~~---d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~la~~ 153 (337)
.+.++... .....+.++++ .++++. +++|.+||+.+++.+.. +.... ..+ ..+.+++...+++.+
T Consensus 93 ~~~~i~~~~~~~~~g~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~-v~~~p~~~~~~~~~~ 170 (361)
T 2oiz_A 93 FEKEISLPPKRVQGLNYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWS-VIPQPNRPRSFMTIC 170 (361)
T ss_dssp EEEEEEECTTBCCBCCCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEE-EEECTTSSSEEEEEE
T ss_pred EEEEEEcCccccccCCCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cce-eEEcCCCCeeEEEEC
Confidence 99888753 24566788765 466654 46899999999988887 65422 111 223333322333333
Q ss_pred CCCCccEEEEEEccC-Cccc---------c--cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCce--eEeecc----
Q 019672 154 ASTTKGSVLVYNVME-LHSH---------C--EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK--SYSFRR---- 215 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~-~~~~---------~--~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~--~~~~~~---- 215 (337)
.||.+.+|++.. ++.. . ..+ ..+.++|+|..++..+.++. +.++|+..++. +..+..
T Consensus 171 ---~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~-~~~~~~~~g~~~~~~~~~~~-v~v~d~~~~~~~~~~~~~~~~~~ 245 (361)
T 2oiz_A 171 ---GDGGLLTINLGEDGKVASQSRSKQMFSVKDDP-IFIAPALDKDKAHFVSYYGN-VYSADFSGDEVKVDGPWSLLNDE 245 (361)
T ss_dssp ---TTSSEEEEEECTTSSEEEEEECCCCSCTTTSC-BCSCCEECSSEEEEEBTTSE-EEEEECSSSSCEEEEEEESCCHH
T ss_pred ---CCCcEEEEEECCCCcEeeeccccceEcCCCCc-eEEEecccCCEEEEEeCCCe-EEEEEecCCCceecccccccCcc
Confidence 378888888754 3221 0 012 13344677888888888887 68999875532 122110
Q ss_pred ----CCcceeEEEEEeecCCCcccEEEEEeC-----------CCcEEEEecCCCcccCCCCcccccccccccccceeecc
Q 019672 216 ----GTYPSTIFSLSFGQSMQFQDILVATSS-----------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLD 280 (337)
Q Consensus 216 ----~~~~~~i~~l~fs~dg~~~~~las~s~-----------dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~ 280 (337)
+..+....-++|+||++ .+.++.. .++|.+||+++.+.... ++-.. .|
T Consensus 246 ~~~~~~~p~g~~~~a~~~dg~---~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~-----------i~~~~--p~- 308 (361)
T 2oiz_A 246 DKAKNWVPGGYNLVGLHRASG---RMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVAR-----------IPGRD--AL- 308 (361)
T ss_dssp HHHTTCEECCSSCEEEETTTT---EEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEE-----------EECTT--CC-
T ss_pred ccccccccCCeeEEEEecCCC---eEEEEEccCCCcccccCCCceEEEEECCCCcEEEE-----------EecCC--ee-
Confidence 00011111268999988 6665532 35899999887653221 11000 12
Q ss_pred cccceeeeeccCCCcccCEEEEEEeCCcEEEEEEe
Q 019672 281 PADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFS 315 (337)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~ 315 (337)
.+.+.+++++|++.+. +.+.+|+..
T Consensus 309 ---------~ia~spdg~~l~v~n~-~~v~v~D~~ 333 (361)
T 2oiz_A 309 ---------SMTIDQQRNLMLTLDG-GNVNVYDIS 333 (361)
T ss_dssp ---------EEEEETTTTEEEEECS-SCEEEEECS
T ss_pred ---------EEEECCCCCEEEEeCC-CeEEEEECC
Confidence 2233566688988886 999999554
No 189
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.39 E-value=3.1e-10 Score=102.78 Aligned_cols=230 Identities=12% Similarity=0.007 Sum_probs=150.5
Q ss_pred EEEEcCCCCEEEEEc-----------CCceEEEeCCCCcEEEEEeeC---------CEEEEEEccCCCEEEEEeCCCCCC
Q 019672 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG---------AFSIVEMLYSSSLLAIVGAGEQPS 71 (337)
Q Consensus 12 ~~~fs~dg~~la~g~-----------~~g~~vw~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 71 (337)
.+.++|||+++.++. .+.+.+||..+++.+...... .-..+.+.+++..+.+....
T Consensus 82 ~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~---- 157 (386)
T 3sjl_D 82 NPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFS---- 157 (386)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECS----
T ss_pred cEEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcC----
Confidence 489999999887664 245799999999887766432 12235677777776655421
Q ss_pred CCCceEEEEECCCCCEEEEEEcCCceeEEEE-cCCeEEE-EECCeEEEEECCC-CeeeeeecCCC----CCceE-EEEee
Q 019672 72 LSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKRLVI-VLREKTYIYDANT-LAILDTIDTVP----NLKGL-CAFSP 143 (337)
Q Consensus 72 ~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~~~v-~~d~~i~i~d~~~-~~~~~~~~~~~----~~~~~-~~~~~ 143 (337)
.++.|.++|+.+++.+.++..+... .+.- ....++. +.|+++.+.++.+ ++......... .+... ..+.
T Consensus 158 -~~~~VsVID~~t~~vv~tI~v~g~~-~~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~- 234 (386)
T 3sjl_D 158 -PAPAVGVVDLEGKAFKRMLDVPDCY-HIFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYS- 234 (386)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSEE-EEEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEE-
T ss_pred -CCCeEEEEECCCCcEEEEEECCCcc-eeecCCCceeEEECCCCCEEEEECCCCCeEEEeecceeccccccccccceeE-
Confidence 3689999999999999999776532 2222 2333433 3389999999976 55432111111 11110 1222
Q ss_pred CCCccEEEEcCCCCccEEEEEEccCCcc--ccc---------------CceEEEEeCCCCCEEEEEeCC---------Cc
Q 019672 144 SLNACFLAVPASTTKGSVLVYNVMELHS--HCE---------------APLAAIVLSSNGMYIATASEQ---------GT 197 (337)
Q Consensus 144 ~~~~~~la~~~~~~dg~v~i~d~~~~~~--~~~---------------~~i~~~~~s~dg~~lat~s~d---------g~ 197 (337)
.+++.++..+. +|.|.+.|+.+... ... .....++++|++++|..+..+ +.
T Consensus 235 ~~dG~~~~vs~---~g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~ 311 (386)
T 3sjl_D 235 QKAGRLVWPTY---TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 311 (386)
T ss_dssp TTTTEEEEEBT---TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred cCCCcEEEEeC---CCEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCC
Confidence 24555544433 68999999865432 111 334568889999988876531 23
Q ss_pred EEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEE-EeCCCcEEEEecCCCcc
Q 019672 198 IIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVA-TSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 198 ~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las-~s~dg~v~iw~l~~~~~ 256 (337)
.|-+.|+++++.+.++..+ ..+++|+|+||++ ++|.+ ...+++|.|+|..+.+.
T Consensus 312 ~V~viD~~t~kv~~~i~vg---~~~~~lavs~D~~--~~ly~tn~~~~~VsViD~~t~k~ 366 (386)
T 3sjl_D 312 FVVVLDAKTGERLAKFEMG---HEIDSINVSQDEK--PLLYALSTGDKTLYIHDAESGEE 366 (386)
T ss_dssp EEEEEETTTCCEEEEEEEE---EEECEEEECSSSS--CEEEEEETTTTEEEEEETTTCCE
T ss_pred EEEEEECCCCeEEEEEECC---CCcceEEECCCCC--eEEEEEcCCCCeEEEEECCCCcE
Confidence 4679999999999988654 3688999999995 25555 45689999999987654
No 190
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.38 E-value=2.7e-10 Score=99.27 Aligned_cols=219 Identities=7% Similarity=-0.005 Sum_probs=151.2
Q ss_pred CCCEEEEEcCCc-eEEEeCCCCcEEEEEeeC---CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEc
Q 019672 18 DNSGFALSTKDG-FKIFDSSTGRLCYERAVG---AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNF 93 (337)
Q Consensus 18 dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~ 93 (337)
.++.|++++.++ +.+||.++++.+.....+ ....+.+.++.+.++ +. ++.|..||. +|+.+.++..
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~-------~~~V~~~d~-~G~~~W~~~~ 73 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SY-------SKGAKMITR-DGRELWNIAA 73 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--EC-------BSEEEEECT-TSCEEEEEEC
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eC-------CCCEEEECC-CCCEEEEEcC
Confidence 346777777766 699999999998877653 345566777777655 33 678999999 8999999887
Q ss_pred C--CceeEEEEcCCeEEEEE--C--CeEEEEECCCCeeeeeecCCCC---C-ceEEEEeeCCCccEEEEcCCCCccEEEE
Q 019672 94 L--TSILAVRLNKKRLVIVL--R--EKTYIYDANTLAILDTIDTVPN---L-KGLCAFSPSLNACFLAVPASTTKGSVLV 163 (337)
Q Consensus 94 ~--~~v~~i~~~~~~~~v~~--d--~~i~i~d~~~~~~~~~~~~~~~---~-~~~~~~~~~~~~~~la~~~~~~dg~v~i 163 (337)
+ ..+.++.+.+++.+++. + +.+..+|. +++.+.++..... + .....+++.+++.++++.. .++.|..
T Consensus 74 ~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~--~~~~v~~ 150 (276)
T 3no2_A 74 PAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLF--ATSEVRE 150 (276)
T ss_dssp CTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEET--TTTEEEE
T ss_pred CCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCCCCEEEEec--CCCEEEE
Confidence 5 36777777666543333 3 36666674 6777666642211 0 0111224566777888766 4899999
Q ss_pred EEccCCccccc----CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCC----cceeEEEEEeecCCCccc
Q 019672 164 YNVMELHSHCE----APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT----YPSTIFSLSFGQSMQFQD 235 (337)
Q Consensus 164 ~d~~~~~~~~~----~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~----~~~~i~~l~fs~dg~~~~ 235 (337)
||.. ++.+.+ ..+.++.+.++|+.+++++.+++ |..+|..+|+.+.++.... .-..+..++..++|.
T Consensus 151 ~d~~-G~~~w~~~~~~~~~~~~~~~~g~~~v~~~~~~~-v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~~~~~~G~--- 225 (276)
T 3no2_A 151 IAPN-GQLLNSVKLSGTPFSSAFLDNGDCLVACGDAHC-FVQLNLESNRIVRRVNANDIEGVQLFFVAQLFPLQNGG--- 225 (276)
T ss_dssp ECTT-SCEEEEEECSSCCCEEEECTTSCEEEECBTTSE-EEEECTTTCCEEEEEEGGGSBSCCCSEEEEEEECTTSC---
T ss_pred ECCC-CCEEEEEECCCCccceeEcCCCCEEEEeCCCCe-EEEEeCcCCcEEEEecCCCCCCccccccccceEcCCCC---
Confidence 9998 776543 45677888999999998888877 5799999999998885321 112378889999998
Q ss_pred EEEEEeCC--------CcEEEEecCCC
Q 019672 236 ILVATSSS--------GSLHVFSPGFA 254 (337)
Q Consensus 236 ~las~s~d--------g~v~iw~l~~~ 254 (337)
++++.+.- +..+++++...
T Consensus 226 i~v~~~~g~~~~~~~~~~~~~~~~~~~ 252 (276)
T 3no2_A 226 LYICNWQGHDREAGKGKHPQLVEIDSE 252 (276)
T ss_dssp EEEEEECTTCTTGGGSCCCSEEEECTT
T ss_pred EEEEeccCccccccccCCceEEEECCC
Confidence 77776421 24567777543
No 191
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.35 E-value=2e-09 Score=94.54 Aligned_cols=227 Identities=11% Similarity=0.038 Sum_probs=140.9
Q ss_pred CeEEEEEcCCCCEEEE--------EcCCceEEEeCCCCcEEEEE------eeCCEEEEEEccCCCEEEEEeCCCCCCCCC
Q 019672 9 PVFFVSFNQDNSGFAL--------STKDGFKIFDSSTGRLCYER------AVGAFSIVEMLYSSSLLAIVGAGEQPSLSP 74 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~--------g~~~g~~vw~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d 74 (337)
...+++|+++|+.+++ ..++++.+||..+++...-. .......+.+..+...+.+++. .
T Consensus 19 ~~~~~~~~~~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~-------~ 91 (314)
T 1pjx_A 19 GAEGPVFDKNGDFYIVAPEVEVNGKPAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADM-------R 91 (314)
T ss_dssp TCEEEEECTTSCEEEEETTCEETTEECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEET-------T
T ss_pred CccCceECCCCCEEEEEeccccCCCCCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEEC-------C
Confidence 4578999999998777 34456899998877654221 1123333344333123333333 3
Q ss_pred ceEEEEECCCCCEEEE-EEcC-----CceeEEEEcCCe-EEEEEC-----------------CeEEEEECCCCeeeeeec
Q 019672 75 RRLCLFNTTTGTALRE-LNFL-----TSILAVRLNKKR-LVIVLR-----------------EKTYIYDANTLAILDTID 130 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~-~~~~-----~~v~~i~~~~~~-~~v~~d-----------------~~i~i~d~~~~~~~~~~~ 130 (337)
+.|.+||.. ++.... .... ..+.++.+++++ +.++.. +.|..||.. ++......
T Consensus 92 ~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~ 169 (314)
T 1pjx_A 92 LGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT 169 (314)
T ss_dssp TEEEEEETT-SCEEECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE
T ss_pred CCEEEEeCC-CCEEEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEecc
Confidence 489999998 765432 2111 247788898765 445442 357777765 44332222
Q ss_pred CCCCCceEEEEeeC----CCccEEEEcCCCCccEEEEEEcc-CCcc-----ccc------CceEEEEeCCCCCEEEEEeC
Q 019672 131 TVPNLKGLCAFSPS----LNACFLAVPASTTKGSVLVYNVM-ELHS-----HCE------APLAAIVLSSNGMYIATASE 194 (337)
Q Consensus 131 ~~~~~~~~~~~~~~----~~~~~la~~~~~~dg~v~i~d~~-~~~~-----~~~------~~i~~~~~s~dg~~lat~s~ 194 (337)
.... ...+..+ +++..+.++.. .++.|.+||+. +++. ... ..+..++++++|++.++...
T Consensus 170 ~~~~---~~~i~~~~~~d~dg~~l~v~~~-~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~ 245 (314)
T 1pjx_A 170 AFQF---PNGIAVRHMNDGRPYQLIVAET-PTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWG 245 (314)
T ss_dssp EESS---EEEEEEEECTTSCEEEEEEEET-TTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEET
T ss_pred CCCC---cceEEEecccCCCCCEEEEEEC-CCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcC
Confidence 1111 2333445 77755544432 36889999976 3321 111 34788999999998888777
Q ss_pred CCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEE-eCCCcEEEEecCCC
Q 019672 195 QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT-SSSGSLHVFSPGFA 254 (337)
Q Consensus 195 dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~-s~dg~v~iw~l~~~ 254 (337)
++. |.+||..+++.+..+..+ ...+.+++|+|+|+ .|.++ ..++.|..|+++..
T Consensus 246 ~~~-i~~~d~~~g~~~~~~~~~--~~~~~~i~~~~dg~---~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 246 SSH-IEVFGPDGGQPKMRIRCP--FEKPSNLHFKPQTK---TIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp TTE-EEEECTTCBSCSEEEECS--SSCEEEEEECTTSS---EEEEEETTTTEEEEEECSSC
T ss_pred CCE-EEEEcCCCCcEeEEEeCC--CCCceeEEECCCCC---EEEEEeCCCCeEEEEeCCCC
Confidence 776 589999877766655432 24588999999998 66555 45688999998653
No 192
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.34 E-value=5.2e-10 Score=99.92 Aligned_cols=218 Identities=10% Similarity=0.080 Sum_probs=136.8
Q ss_pred CCeEEEEEcCCCCEEEEEc----------CCceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceE
Q 019672 8 YPVFFVSFNQDNSGFALST----------KDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRL 77 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~----------~~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v 77 (337)
..+..++| ||++++... ...+.+||+++++...- ..+....+.+++..+++++.... .....|
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~l---~~~~~~~~SpDg~~la~~~~~~~--~~~~~l 87 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKYENTIVIENLKNNARRFI---ENATMPRISPDGKKIAFMRANEE--KKVSEI 87 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEEEEEEEEEETTTCCEEEE---ESCEEEEECTTSSEEEEEEEETT--TTEEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCccceEEEEeCCCCceEEc---ccCCCeEECCCCCEEEEEEeccC--CCcceE
Confidence 45778888 999877542 12257889988764322 34556678888888888764200 012358
Q ss_pred EEEECCCCCEEEEEEcCCceeEEEEcCCe--EEEEE-C---------------------------CeEEEEECCCCeeee
Q 019672 78 CLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVL-R---------------------------EKTYIYDANTLAILD 127 (337)
Q Consensus 78 ~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~-d---------------------------~~i~i~d~~~~~~~~ 127 (337)
.+||+.+++.......+. +..+.|+++. ++++. + ..|++||+.+++.+.
T Consensus 88 ~~~~~~~g~~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~ 166 (347)
T 2gop_A 88 WVADLETLSSKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIE 166 (347)
T ss_dssp EEEETTTTEEEEEEEESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEE
T ss_pred EEEECCCCceEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEe
Confidence 888998887665555555 8889998764 55443 2 469999998887644
Q ss_pred eecCCCCCceEEEEeeCCCccEEEEcCCCC-------ccEEEEEEccCCccc--cc-CceEEEEeCCCCCEEEEEeCCC-
Q 019672 128 TIDTVPNLKGLCAFSPSLNACFLAVPASTT-------KGSVLVYNVMELHSH--CE-APLAAIVLSSNGMYIATASEQG- 196 (337)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~-------dg~v~i~d~~~~~~~--~~-~~i~~~~~s~dg~~lat~s~dg- 196 (337)
.+.. + .+..+.++|++ +++++.... ...|.++| +++.. .. ..+.. ++|||++|+.++.++
T Consensus 167 ~l~~-~---~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~~~~~~~~--~spdg~~l~~~~~~~~ 237 (347)
T 2gop_A 167 EFEK-P---RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE--DGKEEKMFEKVSFYA--VDSDGERILLYGKPEK 237 (347)
T ss_dssp EEEE-E---TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE--TTEEEEEEEEESEEE--EEECSSCEEEEECCSS
T ss_pred eecC-C---CcccccCCCCe-EEEEEecccccccccccccEEEeC--CCceEEeccCcceee--ECCCCCEEEEEEcccc
Confidence 5443 2 23344556777 555553211 12455555 33321 11 33333 499999998887553
Q ss_pred ------cEEEEEEcCCCceeEeeccCCcceeEEE-EEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 197 ------TIIRVFLVSEATKSYSFRRGTYPSTIFS-LSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 197 ------~~i~vwd~~~~~~~~~~~~~~~~~~i~~-l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
..|.+|| +++.. .+..+ +...+.. +.|+ |+ ++++++.++.++|| +.
T Consensus 238 ~~~~~~~~l~~~d--~~~~~-~l~~~-~~~~~~~~~~~s-dg----~~~~~~~~~~~~l~-~~ 290 (347)
T 2gop_A 238 KYMSEHNKLYIYD--GKEVM-GILDE-VDRGVGQAKIKD-GK----VYFTLFEEGSVNLY-IW 290 (347)
T ss_dssp SCCCSSCEEEEEC--SSCEE-ESSTT-CCSEEEEEEEET-TE----EEEEEEETTEEEEE-EE
T ss_pred CCccccceEEEEC--CCceE-ecccc-CCcccCCccEEc-Cc----EEEEEecCCcEEEE-Ec
Confidence 2356777 55543 33322 2445775 8999 76 68899999999999 87
No 193
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.34 E-value=8.4e-10 Score=105.65 Aligned_cols=172 Identities=13% Similarity=0.076 Sum_probs=126.5
Q ss_pred CCceEEEEECCCCCEEEEEEcCCceeEEEEcCC--eEEEEE-CCeEEEEECC--CCeeeeeecCCCCCceEEEEeeC---
Q 019672 73 SPRRLCLFNTTTGTALRELNFLTSILAVRLNKK--RLVIVL-REKTYIYDAN--TLAILDTIDTVPNLKGLCAFSPS--- 144 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~~-d~~i~i~d~~--~~~~~~~~~~~~~~~~~~~~~~~--- 144 (337)
.+++|.++|..+++.+.++.....+..+.++++ +++++. ++.|.+||+. +++.+.++....++ ..+.++
T Consensus 175 ~~~~V~viD~~t~~v~~~i~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~~P---~~ia~s~~~ 251 (567)
T 1qks_A 175 DAGQIALIDGSTYEIKTVLDTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGSEA---RSIETSKME 251 (567)
T ss_dssp TTTEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCSEE---EEEEECCST
T ss_pred CCCeEEEEECCCCeEEEEEeCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCCCC---ceeEEcccc
Confidence 589999999999999999988777778999876 455555 7899999995 78888888764443 344556
Q ss_pred -CCccEEEEcCCCCccEEEEEEccCCccccc----------------CceEEEEeCCCCCEEEEE-eCCCcEEEEEEcCC
Q 019672 145 -LNACFLAVPASTTKGSVLVYNVMELHSHCE----------------APLAAIVLSSNGMYIATA-SEQGTIIRVFLVSE 206 (337)
Q Consensus 145 -~~~~~la~~~~~~dg~v~i~d~~~~~~~~~----------------~~i~~~~~s~dg~~lat~-s~dg~~i~vwd~~~ 206 (337)
|++.+++++.. .+++|.|+|..+.+.+.. ..+..+.+++++..++.. .++|. |.++|..+
T Consensus 252 ~pDGk~l~v~n~-~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~-v~~vd~~~ 329 (567)
T 1qks_A 252 GWEDKYAIAGAY-WPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGK-ILLVDYTD 329 (567)
T ss_dssp TCTTTEEEEEEE-ETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTE-EEEEETTC
T ss_pred CCCCCEEEEEEc-cCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCe-EEEEecCC
Confidence 57888887775 579999999888765432 146788899987755544 45565 68999877
Q ss_pred CceeE--eeccCCcceeEEEEEeecCCCcccEEEEE-eCCCcEEEEecCCCc
Q 019672 207 ATKSY--SFRRGTYPSTIFSLSFGQSMQFQDILVAT-SSSGSLHVFSPGFAI 255 (337)
Q Consensus 207 ~~~~~--~~~~~~~~~~i~~l~fs~dg~~~~~las~-s~dg~v~iw~l~~~~ 255 (337)
.+.+. .+..+ .....+.|+|||+ +++++ ..+++|.++|+++.+
T Consensus 330 ~~~~~v~~i~~~---~~~~d~~~~pdgr---~~~va~~~sn~V~ViD~~t~k 375 (567)
T 1qks_A 330 LNNLKTTEISAE---RFLHDGGLDGSHR---YFITAANARNKLVVIDTKEGK 375 (567)
T ss_dssp SSEEEEEEEECC---SSEEEEEECTTSC---EEEEEEGGGTEEEEEETTTTE
T ss_pred Cccceeeeeecc---ccccCceECCCCC---EEEEEeCCCCeEEEEECCCCc
Confidence 64332 22221 2367889999999 66554 467899999998764
No 194
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.30 E-value=8.6e-11 Score=115.60 Aligned_cols=237 Identities=9% Similarity=0.006 Sum_probs=144.4
Q ss_pred CCeEEEEEcCCCCEEEEEc-----CC-ceEEEeCCCCcEE-EEEeeCCE--EEEEEccCCCEEEEEeCCCCC------CC
Q 019672 8 YPVFFVSFNQDNSGFALST-----KD-GFKIFDSSTGRLC-YERAVGAF--SIVEMLYSSSLLAIVGAGEQP------SL 72 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~-----~~-g~~vw~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~------~~ 72 (337)
..+.+++|||||++||.+. ++ .+++||+++++.+ .. ....+ ..+.+.+++..+++++..... ..
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~ 199 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVD-VIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERP 199 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSC-CBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCc-ccCcccccceEEecCCCEEEEEEecCCCCCccccCC
Confidence 4688999999999988443 22 3699999998765 21 11222 446777888888887652100 00
Q ss_pred CCceEEEEECCCCCE--EEEEEc---CCceeEEEEcCCe--EEEEE-CC----eEEEEECCCCeeeeeecCCCCCceEEE
Q 019672 73 SPRRLCLFNTTTGTA--LRELNF---LTSILAVRLNKKR--LVIVL-RE----KTYIYDANTLAILDTIDTVPNLKGLCA 140 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~--~~~~~~---~~~v~~i~~~~~~--~~v~~-d~----~i~i~d~~~~~~~~~~~~~~~~~~~~~ 140 (337)
....|++|++.+++. ...+.. ...+..+.+++++ +++.. ++ .|+++|..+++. ..+..+... ....
T Consensus 200 ~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~-~~l~~~~~~-~~~~ 277 (695)
T 2bkl_A 200 GYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDF-RLLVKGVGA-KYEV 277 (695)
T ss_dssp GGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSC-EEEEECSSC-CEEE
T ss_pred CCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCce-EEeecCCCc-eEEE
Confidence 123499999998762 222222 2367788898875 44433 44 677777655543 233222221 1222
Q ss_pred EeeCCCccEEEEcCCC-CccEEEEEEccCCcc-----c--c--cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcC-CCce
Q 019672 141 FSPSLNACFLAVPAST-TKGSVLVYNVMELHS-----H--C--EAPLAAIVLSSNGMYIATASEQGTIIRVFLVS-EATK 209 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~-~dg~v~i~d~~~~~~-----~--~--~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~-~~~~ 209 (337)
+.+ ++.+++..... .++.|.+||+.++.. + + ...+..++++ ++.++++...||. .+||.+. +++.
T Consensus 278 ~~~--~g~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~g~~ 353 (695)
T 2bkl_A 278 HAW--KDRFYVLTDEGAPRQRVFEVDPAKPARASWKEIVPEDSSASLLSVSIV-GGHLSLEYLKDAT-SEVRVATLKGKP 353 (695)
T ss_dssp EEE--TTEEEEEECTTCTTCEEEEEBTTBCSGGGCEEEECCCSSCEEEEEEEE-TTEEEEEEEETTE-EEEEEEETTCCE
T ss_pred Eec--CCcEEEEECCCCCCCEEEEEeCCCCCccCCeEEecCCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCCCCe
Confidence 222 33344443311 258899999977542 1 1 1457888888 7788899999986 5787654 4655
Q ss_pred eEeeccCCcceeEEEEEeecCCCcccEEEEEe----CCCcEEEEecCCCc
Q 019672 210 SYSFRRGTYPSTIFSLSFGQSMQFQDILVATS----SSGSLHVFSPGFAI 255 (337)
Q Consensus 210 ~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s----~dg~v~iw~l~~~~ 255 (337)
+..+.. .....+..++++||++ .|+... ..++|++||+.+++
T Consensus 354 ~~~l~~-~~~~~v~~~~~s~d~~---~l~~~~ss~~~P~~v~~~d~~~g~ 399 (695)
T 2bkl_A 354 VRTVQL-PGVGAASNLMGLEDLD---DAYYVFTSFTTPRQIYKTSVSTGK 399 (695)
T ss_dssp EEECCC-SSSSEECCCBSCTTCS---EEEEEEEETTEEEEEEEEETTTCC
T ss_pred eEEecC-CCCeEEEEeecCCCCC---EEEEEEcCCCCCCEEEEEECCCCc
Confidence 555532 2245678889999997 665332 23689999997654
No 195
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.28 E-value=3.8e-09 Score=92.35 Aligned_cols=187 Identities=9% Similarity=0.017 Sum_probs=118.8
Q ss_pred EEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC-CceeEEEEcCCe-EEEEE--CCeEEEEECCCCe
Q 019672 49 FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-TSILAVRLNKKR-LVIVL--REKTYIYDANTLA 124 (337)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~v~~i~~~~~~-~~v~~--d~~i~i~d~~~~~ 124 (337)
.....+..+.+.+++++. .++.|..||..++ ...+..+ ..+.++++++++ ++++. ++.|.+||..+++
T Consensus 30 ~eg~~~d~~g~~l~~~~~------~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~ 101 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDV------RQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGE 101 (296)
T ss_dssp EEEEEEEGGGTEEEEEEG------GGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCC
T ss_pred ccCCeEeCCCCEEEEEeC------CCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCc
Confidence 344555566664555554 3789999999887 4455443 468899998765 44454 4689999997776
Q ss_pred eeeeecCCCCC--ceEEEEeeCCCccEEEEcCC---------------CCccEEEEEEccCCccc----ccCceEEEEeC
Q 019672 125 ILDTIDTVPNL--KGLCAFSPSLNACFLAVPAS---------------TTKGSVLVYNVMELHSH----CEAPLAAIVLS 183 (337)
Q Consensus 125 ~~~~~~~~~~~--~~~~~~~~~~~~~~la~~~~---------------~~dg~v~i~d~~~~~~~----~~~~i~~~~~s 183 (337)
........... .....+..++++.++++... ...+.|..+|.. ++.. .....+.++|+
T Consensus 102 ~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s 180 (296)
T 3e5z_A 102 WESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFL 180 (296)
T ss_dssp EEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEEC
T ss_pred EEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEEC
Confidence 54332211110 11234566777877775210 012456666654 3221 12567899999
Q ss_pred CCCCEEEEEeCCCcEEEEEEcC-CCce---eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 184 SNGMYIATASEQGTIIRVFLVS-EATK---SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 184 ~dg~~lat~s~dg~~i~vwd~~-~~~~---~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
|||+.|++.+.++. |++||+. +|+. ...+ .. ....+.+|+++++|+ ++++. ++.|.+|+.+
T Consensus 181 ~dg~~lv~~~~~~~-i~~~~~~~~g~~~~~~~~~-~~-~~~~p~~i~~d~~G~---l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 181 PSGNLLVSDTGDNA-THRYCLNARGETEYQGVHF-TV-EPGKTDGLRVDAGGL---IWASA--GDGVHVLTPD 245 (296)
T ss_dssp TTSCEEEEETTTTE-EEEEEECSSSCEEEEEEEE-CC-SSSCCCSEEEBTTSC---EEEEE--TTEEEEECTT
T ss_pred CCCCEEEEeCCCCe-EEEEEECCCCcCcCCCeEe-eC-CCCCCCeEEECCCCC---EEEEc--CCeEEEECCC
Confidence 99999877777776 6899997 5554 2333 21 233456799999998 66666 7889999975
No 196
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.28 E-value=3.1e-09 Score=104.74 Aligned_cols=232 Identities=6% Similarity=-0.060 Sum_probs=139.5
Q ss_pred CCCCEEEEEcCC-c--e-EEEe--CCCCcE--EEEEe----eC--CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 17 QDNSGFALSTKD-G--F-KIFD--SSTGRL--CYERA----VG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 17 ~dg~~la~g~~~-g--~-~vw~--~~~~~~--~~~~~----~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
|||++++-...+ + . .+|- ..+++. +.... .+ .+....+++++..+++..... +....+|++||+
T Consensus 81 ~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDg~~la~~~~~~--G~~~~~i~v~d~ 158 (710)
T 2xdw_A 81 KKGKRYFYFYNTGLQNQRVLYVQDSLEGEARVFLDPNILSDDGTVALRGYAFSEDGEYFAYGLSAS--GSDWVTIKFMKV 158 (710)
T ss_dssp EETTEEEEEEECSSCSSCEEEEESSTTSCCEEEECGGGGCTTSCEEEEEEEECTTSSEEEEEEEET--TCSCEEEEEEET
T ss_pred EECCEEEEEEEcCCceEEEEEEEcCCCCCcEEEECHHHhccCCCEEEEEEEECCCCCEEEEEEcCC--CCceEEEEEEEC
Confidence 889887654322 2 1 4554 334432 22211 12 244566777888888775410 012248999999
Q ss_pred CCCCEEEEEEcCCceeEEEEcCCe--EEEEE-CCe----------------EEEEECCCCeee--eeecCCCCCceEEEE
Q 019672 83 TTGTALRELNFLTSILAVRLNKKR--LVIVL-REK----------------TYIYDANTLAIL--DTIDTVPNLKGLCAF 141 (337)
Q Consensus 83 ~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~-d~~----------------i~i~d~~~~~~~--~~~~~~~~~~~~~~~ 141 (337)
.+++.+........+..+.|++++ ++.+. ++. |++|++.+++.. ..+....++.....+
T Consensus 159 ~tg~~~~~~~~~~~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~ 238 (710)
T 2xdw_A 159 DGAKELPDVLERVKFSCMAWTHDGKGMFYNAYPQQDGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGA 238 (710)
T ss_dssp TTTEEEEEEEEEECSCCEEECTTSSEEEEEECCCCSSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEE
T ss_pred CCCCCCcccccCcccceEEEEeCCCEEEEEEECCccccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEE
Confidence 999876533222346678898764 55544 433 999999877522 222322234445667
Q ss_pred eeCCCccEEEEcCCCC---ccEEEEEEccC------Cc-cc-----ccCceEEEEeCCCCCEEEEEeCCCc---EEEEEE
Q 019672 142 SPSLNACFLAVPASTT---KGSVLVYNVME------LH-SH-----CEAPLAAIVLSSNGMYIATASEQGT---IIRVFL 203 (337)
Q Consensus 142 ~~~~~~~~la~~~~~~---dg~v~i~d~~~------~~-~~-----~~~~i~~~~~s~dg~~lat~s~dg~---~i~vwd 203 (337)
.++|++.+|++..... +..|.+||+.+ +. .. +...+.. .|+|+|+.|+..+.++. .|.+||
T Consensus 239 ~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d 317 (710)
T 2xdw_A 239 ELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINID 317 (710)
T ss_dssp EECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEE
T ss_pred EEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEe
Confidence 7788888888664211 56899999976 42 11 1133443 58899998887766432 257899
Q ss_pred cCCCc--eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcE--EEEecCCC
Q 019672 204 VSEAT--KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSL--HVFSPGFA 254 (337)
Q Consensus 204 ~~~~~--~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v--~iw~l~~~ 254 (337)
+.+++ ....+..+.....+.+++|++++. ++++...++.. ++|++.++
T Consensus 318 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~---lv~~~~~~g~~~l~~~~~~~g 369 (710)
T 2xdw_A 318 FTDPEESKWKVLVPEHEKDVLEWVACVRSNF---LVLCYLHDVKNTLQLHDLATG 369 (710)
T ss_dssp TTSCCGGGCEEEECCCSSCEEEEEEEETTTE---EEEEEEETTEEEEEEEETTTC
T ss_pred CCCCCcccceeccCCCCCCeEEEEEEEcCCE---EEEEEEECCEEEEEEEECCCC
Confidence 98874 223443332223688899998877 88888889864 55565443
No 197
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.27 E-value=3.5e-10 Score=102.73 Aligned_cols=174 Identities=10% Similarity=0.146 Sum_probs=120.4
Q ss_pred CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC-----------EEEEEEcCCceeEEEEcCCeEEEEECCeEE
Q 019672 48 AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT-----------ALRELNFLTSILAVRLNKKRLVIVLREKTY 116 (337)
Q Consensus 48 ~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~-----------~~~~~~~~~~v~~i~~~~~~~~v~~d~~i~ 116 (337)
.+..+++......++.++. ..+++|+++..+ .......+. |..++|+.+.++++.++.|+
T Consensus 39 ~~nlLais~~~gll~a~~~--------~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~~~~~l~ 109 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASG--------SKAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVSTRNALY 109 (388)
T ss_dssp CCBCEEEETTTTEEEEEET--------TEEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEEESSEEE
T ss_pred cccEEEEcCCCCEEEEeCC--------CEEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEEcCCcEE
Confidence 3555666666666554443 478889854322 234556677 99999977778888799999
Q ss_pred EEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc-ccCceEEEEeCCCCCEEEEEeCC
Q 019672 117 IYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH-CEAPLAAIVLSSNGMYIATASEQ 195 (337)
Q Consensus 117 i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~-~~~~i~~~~~s~dg~~lat~s~d 195 (337)
+||+++......+..+. ..+..+.+.+.+ +|+.. .||.|.+||+.++... ....|+|++|||+| ++.|..|
T Consensus 110 v~dv~sl~~~~~~~~~~--~~v~~i~~~~p~--~av~~--~dG~L~v~dl~~~~~~~~~~~Vs~v~WSpkG--~~vg~~d 181 (388)
T 1xip_A 110 SLDLEELSEFRTVTSFE--KPVFQLKNVNNT--LVILN--SVNDLSALDLRTKSTKQLAQNVTSFDVTNSQ--LAVLLKD 181 (388)
T ss_dssp EEESSSTTCEEEEEECS--SCEEEEEECSSE--EEEEE--TTSEEEEEETTTCCEEEEEESEEEEEECSSE--EEEEETT
T ss_pred EEEchhhhccCccceee--cceeeEEecCCC--EEEEE--CCCCEEEEEccCCccccccCCceEEEEcCCc--eEEEEcC
Confidence 99997765433332222 235555555443 55554 4899999999866543 33789999999999 6889999
Q ss_pred CcEEEEEEcCCCce--eEeecc----C---CcceeEEEEEeecCCCcccEEEEEeC
Q 019672 196 GTIIRVFLVSEATK--SYSFRR----G---TYPSTIFSLSFGQSMQFQDILVATSS 242 (337)
Q Consensus 196 g~~i~vwd~~~~~~--~~~~~~----~---~~~~~i~~l~fs~dg~~~~~las~s~ 242 (337)
|+ +++|+...++. ..++.. + .+...|.+|.|.++++ +|++-..
T Consensus 182 g~-i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~---flv~y~~ 233 (388)
T 1xip_A 182 RS-FQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQD---FLAVFGN 233 (388)
T ss_dssp SC-EEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSE---EEEEEEC
T ss_pred Cc-EEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCe---EEEEEcC
Confidence 98 68998877764 455521 0 1346799999999998 8887443
No 198
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.27 E-value=1.1e-07 Score=82.45 Aligned_cols=226 Identities=9% Similarity=0.038 Sum_probs=144.7
Q ss_pred CCCCeEEEEEcCCCCEEEEEcC-CceEEEeCCCCcEEE-EEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 6 SSYPVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRLCY-ERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~-~g~~vw~~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
......++.++++|+.+++... +++.+||.. ++... .... .....+.+..+.+.. ++.. .++.|..+|
T Consensus 18 ~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~------~~~~v~~~d 89 (300)
T 2qc5_A 18 PDSGPYGITSSEDGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIW-FTEN------GANKIGKLS 89 (300)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEE-EEET------TTTEEEEEC
T ss_pred CCCCcceeeECCCCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEE-EEec------CCCeEEEEC
Confidence 3567899999999998777654 568999987 65432 2211 233334444344433 3332 367899999
Q ss_pred CCCCCEEEEEEcC---CceeEEEEcCC-eEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCC
Q 019672 82 TTTGTALRELNFL---TSILAVRLNKK-RLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS 155 (337)
Q Consensus 82 ~~~~~~~~~~~~~---~~v~~i~~~~~-~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (337)
.. ++. ..+..+ ..+.++.++++ .+.++. ++.|..||.. ++.. .+..........++..++++.+.++..
T Consensus 90 ~~-g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~- 164 (300)
T 2qc5_A 90 KK-GGF-TEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTEN- 164 (300)
T ss_dssp TT-SCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEET-
T ss_pred CC-CCe-EEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEec-
Confidence 88 654 334332 46788888764 455555 5689999987 5443 222221223456667777777555543
Q ss_pred CCccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeec
Q 019672 156 TTKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQ 229 (337)
Q Consensus 156 ~~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~ 229 (337)
.++.|..+|. +++... ...+..++++++|++.++....+. |.+||. +++... +........+.++++++
T Consensus 165 -~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~ 239 (300)
T 2qc5_A 165 -QNNSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNK-IGRITT-TGEISE-YDIPTPNARPHAITAGK 239 (300)
T ss_dssp -TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTE-EEEECT-TCCEEE-EECSSTTCCEEEEEECS
T ss_pred -CCCeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCE-EEEEcC-CCcEEE-EECCCCCCCceEEEECC
Confidence 3678999988 433221 146889999999987777666665 578998 555433 21111234578999999
Q ss_pred CCCcccEEEEEeCCCcEEEEecC
Q 019672 230 SMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 230 dg~~~~~las~s~dg~v~iw~l~ 252 (337)
+|+ ++++...++.|..|+..
T Consensus 240 ~g~---l~v~~~~~~~i~~~~~~ 259 (300)
T 2qc5_A 240 NSE---IWFTEWGANQIGRITND 259 (300)
T ss_dssp TTC---EEEEETTTTEEEEECTT
T ss_pred CCC---EEEeccCCCeEEEECCC
Confidence 998 77777777899999873
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.26 E-value=2.8e-08 Score=86.25 Aligned_cols=224 Identities=9% Similarity=-0.006 Sum_probs=139.4
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-CceEEEeCCCCcE-EEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 7 SYPVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRL-CYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~-~g~~vw~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
...+.+++++++|..+++... +++..|+.+ ++. .+... ......+.+..+..+ .++.. .++.|..||.
T Consensus 56 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g~l-~v~~~------~~~~i~~~d~ 127 (299)
T 2z2n_A 56 DAKVMCLTISSDGEVWFTENAANKIGRITKK-GIIKEYTLPNPDSAPYGITEGPNGDI-WFTEM------NGNRIGRITD 127 (299)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCE-EEEET------TTTEEEEECT
T ss_pred cCceeeEEECCCCCEEEeCCCCCeEEEECCC-CcEEEEeCCCcCCCceeeEECCCCCE-EEEec------CCceEEEECC
Confidence 467899999999998777764 457889876 433 22221 122333344333333 23332 3678999998
Q ss_pred CCCCEEEEEEc---CCceeEEEEcCC-eEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC
Q 019672 83 TTGTALRELNF---LTSILAVRLNKK-RLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 83 ~~~~~~~~~~~---~~~v~~i~~~~~-~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
+++.. .+.. ...+.++.++++ .+.++. ++.|..||. +++... +..........++..++++.+.++..
T Consensus 128 -~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~~~~g~l~v~~~-- 201 (299)
T 2z2n_A 128 -DGKIR-EYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDITE-FKIPTPASGPVGITKGNDDALWFVEI-- 201 (299)
T ss_dssp -TCCEE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEET--
T ss_pred -CCCEE-EecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEEE-eeCCCCCCcceeEEECCCCCEEEEcc--
Confidence 55543 3322 235788888866 455555 568999998 655433 22222223455667777777665544
Q ss_pred CccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecC
Q 019672 157 TKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS 230 (337)
Q Consensus 157 ~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~d 230 (337)
.++.|.+||. +++... ...+.+++++++|++.++...++. |..||. +++ +..+........+.++++ ++
T Consensus 202 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~-i~~~d~-~g~-~~~~~~~~~~~~~~~i~~-~~ 276 (299)
T 2z2n_A 202 IGNKIGRITT-SGEITEFKIPTPNARPHAITAGAGIDLWFTEWGANK-IGRLTS-NNI-IEEYPIQIKSAEPHGICF-DG 276 (299)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEEET-TTE-EEEEECSSSSCCEEEEEE-CS
T ss_pred CCceEEEECC-CCcEEEEECCCCCCCceeEEECCCCCEEEeccCCce-EEEECC-CCc-eEEEeCCCCCCccceEEe-cC
Confidence 3678999998 554321 156899999999997776656666 579998 454 333322222345889999 99
Q ss_pred CCcccEEEEEeCCCcEEEEecCC
Q 019672 231 MQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 231 g~~~~~las~s~dg~v~iw~l~~ 253 (337)
|. ++++.+ .+.|..++.++
T Consensus 277 g~---l~v~~~-~~~l~~~~~~~ 295 (299)
T 2z2n_A 277 ET---IWFAME-CDKIGKLTLIK 295 (299)
T ss_dssp SC---EEEEET-TTEEEEEEEC-
T ss_pred CC---EEEEec-CCcEEEEEcCc
Confidence 98 666655 56677777654
No 200
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.25 E-value=1.1e-08 Score=94.25 Aligned_cols=234 Identities=9% Similarity=0.029 Sum_probs=145.6
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 8 YPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~~-g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
....+++|+++|+++++...+ .+++||.+++++...........+.+..+.+.+..+... ....|.+||...+.
T Consensus 131 ~~P~~la~d~~g~lyv~d~~~~~I~~id~~~g~~~~~~~~~~~~~ia~~~~g~~l~~~d~~-----~~~~I~~~d~~~~~ 205 (409)
T 3hrp_A 131 KYMWGIAAVGNNTVLAYQRDDPRVRLISVDDNKVTTVHPGFKGGKPAVTKDKQRVYSIGWE-----GTHTVYVYMKASGW 205 (409)
T ss_dssp CCEEEEEECSTTEEEEEETTTTEEEEEETTTTEEEEEEETCCBCBCEECTTSSEEEEEBSS-----TTCEEEEEEGGGTT
T ss_pred CCceEEEEeCCCCEEEEecCCCcEEEEECCCCEEEEeeccCCCCceeEecCCCcEEEEecC-----CCceEEEEEcCCCc
Confidence 457899999999977777654 479999988776544332222226666666766555441 12289999987766
Q ss_pred EEEEE----E-cCCceeEEEEcC-C-eEEEEE-CCeEEEEECCCCeeeee--e-cCCCCCceEE-EEeeCCC-ccEEEEc
Q 019672 87 ALREL----N-FLTSILAVRLNK-K-RLVIVL-REKTYIYDANTLAILDT--I-DTVPNLKGLC-AFSPSLN-ACFLAVP 153 (337)
Q Consensus 87 ~~~~~----~-~~~~v~~i~~~~-~-~~~v~~-d~~i~i~d~~~~~~~~~--~-~~~~~~~~~~-~~~~~~~-~~~la~~ 153 (337)
....+ . ....+.++++++ + .++++. ++.|+.||..++..... . ........-. .++++|+ +.++++.
T Consensus 206 ~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d 285 (409)
T 3hrp_A 206 APTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSD 285 (409)
T ss_dssp CEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEE
T ss_pred eeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEe
Confidence 54444 2 223567788887 4 445533 56899999977643211 0 1111101101 4455553 4444443
Q ss_pred CCCCccEEEEEEccCCcccc------------------cCceEEEEeCCCCCEEEEEe-CCCcEEEEEEcCCCceeEeec
Q 019672 154 ASTTKGSVLVYNVMELHSHC------------------EAPLAAIVLSSNGMYIATAS-EQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~~------------------~~~i~~~~~s~dg~~lat~s-~dg~~i~vwd~~~~~~~~~~~ 214 (337)
. ..+.|+.||........ -.....++++|+|+++++-+ ..++ |+.||+.+|+......
T Consensus 286 ~--~~~~I~~~~~~g~~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~-I~~~~~~~G~v~~~~g 362 (409)
T 3hrp_A 286 Q--NLSSVYKITPDGECEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYC-LRKLDILDGYVSTVAG 362 (409)
T ss_dssp T--TTTEEEEECTTCCEEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCE-EEEEETTTTEEEEEEE
T ss_pred C--CCCEEEEEecCCCEEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCE-EEEEECCCCEEEEEeC
Confidence 3 47889999875421100 13478999999999777766 6665 7999988886432221
Q ss_pred cCC------------cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 215 RGT------------YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 215 ~~~------------~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
.+. .-.....|+++|+|. ++++-..++.|+.++++
T Consensus 363 ~~~~~g~~~g~~~~~~~~~P~giavd~~g~---lyVad~~n~~Ir~i~~e 409 (409)
T 3hrp_A 363 QVDVASQIDGTPLEATFNYPYDICYDGEGG---YWIAEAWGKAIRKYAVE 409 (409)
T ss_dssp CTTCBSCCCBSTTTCCBSSEEEEEECSSSE---EEEEESTTCEEEEEEEC
T ss_pred CCCCCCcCCCChhceEeCCceEEEEcCCCC---EEEEECCCCeEEEEEeC
Confidence 100 012378999999988 88888888999888763
No 201
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.24 E-value=4.1e-09 Score=104.40 Aligned_cols=236 Identities=10% Similarity=-0.019 Sum_probs=144.4
Q ss_pred CeEEEEEcCCCCEEEEEcCC------ceEEEeCCCCcEEEEEeeCCE--EEEEEccCCCEEEEEeCCCCC-------CCC
Q 019672 9 PVFFVSFNQDNSGFALSTKD------GFKIFDSSTGRLCYERAVGAF--SIVEMLYSSSLLAIVGAGEQP-------SLS 73 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~------g~~vw~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~-------~~~ 73 (337)
.+..++|||||++||.+.+. .+++||+++++.+... .... ..+.+.++ +.+++++..... ...
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTT-SEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECC-CEEEEEEecCcccccccccCCC
Confidence 57889999999998876543 3689999999875431 1122 23567777 778777642110 001
Q ss_pred CceEEEEECCCCCE--EEEEEcCC---ceeEEEEcCCe--EEEEE-CC-----eEEEEECCCC--eeeeeecCCCCCceE
Q 019672 74 PRRLCLFNTTTGTA--LRELNFLT---SILAVRLNKKR--LVIVL-RE-----KTYIYDANTL--AILDTIDTVPNLKGL 138 (337)
Q Consensus 74 d~~v~iwd~~~~~~--~~~~~~~~---~v~~i~~~~~~--~~v~~-d~-----~i~i~d~~~~--~~~~~~~~~~~~~~~ 138 (337)
...|.+|++.+++. ...+.... .+..+.+++++ +++.. ++ .|++||+.++ +....+..+... ..
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~-~~ 320 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKA-QW 320 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSS-CE
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCc-eE
Confidence 44699999987752 22222222 37788898876 44433 32 8999999776 313444332222 12
Q ss_pred EEEeeCCCccEEEEcCCC--CccEEEEEEccCCc-c---c---ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcC-CCc
Q 019672 139 CAFSPSLNACFLAVPAST--TKGSVLVYNVMELH-S---H---CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVS-EAT 208 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~--~dg~v~i~d~~~~~-~---~---~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~-~~~ 208 (337)
..+. +++..+++.+.. ..+.|.+||+.+.. . + +...+..++++ ++.++++...||. .+||.+. +++
T Consensus 321 ~~~~--~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~~~~l~~~~~~-~~~lv~~~~~dg~-~~l~~~~~~g~ 396 (741)
T 1yr2_A 321 DFVD--GVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPESKDNLESVGIA-GNRLFASYIHDAK-SQVLAFDLDGK 396 (741)
T ss_dssp EEEE--EETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCCSSEEEEEEEE-BTEEEEEEEETTE-EEEEEEETTSC
T ss_pred EEEe--ccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCCCCeEEEEEEE-CCEEEEEEEECCE-EEEEEEeCCCC
Confidence 2233 344455544321 25679999987742 1 1 11456778887 6678888888886 4677554 466
Q ss_pred eeEeeccCCcceeEEEEEeecCCCcccEEE-EEe---CCCcEEEEecCCCc
Q 019672 209 KSYSFRRGTYPSTIFSLSFGQSMQFQDILV-ATS---SSGSLHVFSPGFAI 255 (337)
Q Consensus 209 ~~~~~~~~~~~~~i~~l~fs~dg~~~~~la-s~s---~dg~v~iw~l~~~~ 255 (337)
.+..+... ....+..++++||++ .|+ +.+ ..++|++||+.+++
T Consensus 397 ~~~~l~~~-~~~~v~~~~~s~d~~---~l~~~~ss~~~P~~i~~~d~~tg~ 443 (741)
T 1yr2_A 397 PAGAVSLP-GIGSASGLSGRPGDR---HAYLSFSSFTQPATVLALDPATAK 443 (741)
T ss_dssp EEEECBCS-SSCEEEEEECCBTCS---CEEEEEEETTEEEEEEEEETTTTE
T ss_pred ceeeccCC-CCeEEEEeecCCCCC---EEEEEEcCCCCCCEEEEEECCCCc
Confidence 55655421 245688999999987 555 333 23789999987654
No 202
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.22 E-value=3.9e-09 Score=95.81 Aligned_cols=222 Identities=13% Similarity=0.109 Sum_probs=143.5
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCc-----------EEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCc
Q 019672 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGR-----------LCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPR 75 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~ 75 (337)
..+++.+++++...++++|+.+++++|+++..+ .........+..+.+ +.+.+++. . ++
T Consensus 37 ~~~~nlLais~~~gll~a~~~~~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~V~~l~f--d~~~L~v~-~-------~~ 106 (388)
T 1xip_A 37 FASLQNLDISNSKSLFVAASGSKAVVGELQLLRDHITSDSTPLTFKWEKEIPDVIFVCF--HGDQVLVS-T-------RN 106 (388)
T ss_dssp SSCCBCEEEETTTTEEEEEETTEEEEEEHHHHHHHHHSSSCCCCCSEEEECTTEEEEEE--ETTEEEEE-E-------SS
T ss_pred cccccEEEEcCCCCEEEEeCCCEEEEEEhhHhhhhhccccccccceEEeeCCCeeEEEE--CCCEEEEE-c-------CC
Confidence 346999999999999999999999999865433 112222334665665 67777665 3 57
Q ss_pred eEEEEECCCCCEEEE-EEcCCceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEc
Q 019672 76 RLCLFNTTTGTALRE-LNFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 76 ~v~iwd~~~~~~~~~-~~~~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 153 (337)
.|++||+.+...... ..+..++.++.+.+..++++. ||.+.+||+.+++... + ...+.+++++|++ ++.+
T Consensus 107 ~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~~-~-----~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 107 ALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTKQ-L-----AQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp EEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEEE-E-----EESEEEEEECSSE--EEEE
T ss_pred cEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCcccc-c-----cCCceEEEEcCCc--eEEE
Confidence 999999876654333 345567888887665566666 9999999998776543 2 2357888999998 3334
Q ss_pred CCCCccEEEEEEccCCcc-----c-----------ccCceEEEEeCCCCCEEEEEeC------C----CcEEEEEEcCCC
Q 019672 154 ASTTKGSVLVYNVMELHS-----H-----------CEAPLAAIVLSSNGMYIATASE------Q----GTIIRVFLVSEA 207 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~-----~-----------~~~~i~~~~~s~dg~~lat~s~------d----g~~i~vwd~~~~ 207 (337)
. .||.+++|+...... + +...|.+|.|.+++.+|++=.. + ...+.|...+.+
T Consensus 179 ~--~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv~y~~~~~~~~~~~~~~~~~~ii~~~~~ 256 (388)
T 1xip_A 179 L--KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLAVFGNVISETDDEVSYDQKMYIIKHIDG 256 (388)
T ss_dssp E--TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEEEEECCCCSSCSSCCCCEEEEEEEEETT
T ss_pred E--cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEEEEcCCCCCcCcccCCcceEEEEEcCCC
Confidence 3 389999998776552 1 3467999999999998887332 1 112455553333
Q ss_pred cee-Eee----------ccCCcceeEEEEEeecCCCcccEEEEEeCCCc-EEEEe
Q 019672 208 TKS-YSF----------RRGTYPSTIFSLSFGQSMQFQDILVATSSSGS-LHVFS 250 (337)
Q Consensus 208 ~~~-~~~----------~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~-v~iw~ 250 (337)
... .++ .|.++-...+=-.|.|+.+ ++++++|...+ |.|++
T Consensus 257 ~~~f~~~~d~~~~fg~~~R~~~~~~~~l~~w~~~~~--~l~iv~Ss~S~di~il~ 309 (388)
T 1xip_A 257 SASFQETFDITPPFGQIVRFPYMYKVTLSGLIEPDA--NVNVLASSCSSEVSIWD 309 (388)
T ss_dssp EEEEEEESSSCCCCCCSCCCCCEEEEEEEEEEETTE--EEEEEEETTCSBCEEEC
T ss_pred CceeEccccCcCCcCCccCCceeeeeehhcccccCC--cEEEEeCCCCcceEEec
Confidence 321 111 1111111122236777766 47777776654 77775
No 203
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.22 E-value=3.8e-09 Score=97.16 Aligned_cols=231 Identities=13% Similarity=0.042 Sum_probs=147.6
Q ss_pred EEEEcCCCCEEEEEc-----------CCceEEEeCCCCcEEEEEeeC---------CEEEEEEccCCCEEEEEeCCCCCC
Q 019672 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG---------AFSIVEMLYSSSLLAIVGAGEQPS 71 (337)
Q Consensus 12 ~~~fs~dg~~la~g~-----------~~g~~vw~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 71 (337)
.+.++|||++|.++. .+.+.++|..+++.+...... .-..+.+.++...+......
T Consensus 122 gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~---- 197 (426)
T 3c75_H 122 HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFS---- 197 (426)
T ss_dssp EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECS----
T ss_pred ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecC----
Confidence 789999999887764 345799999999887766432 11234566677766555421
Q ss_pred CCCceEEEEECCCCCEEEEEEcCCceeEEEEcC-CeEEEEE-CCeEEEEECCCCeeee----eecCCCCCceEEEEeeCC
Q 019672 72 LSPRRLCLFNTTTGTALRELNFLTSILAVRLNK-KRLVIVL-REKTYIYDANTLAILD----TIDTVPNLKGLCAFSPSL 145 (337)
Q Consensus 72 ~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~-~~~~v~~-d~~i~i~d~~~~~~~~----~~~~~~~~~~~~~~~~~~ 145 (337)
.+++|.+.|+.+++.+.++.....+ .+.... ..++... |+++.+.++.+++... .+.....+... .+...+
T Consensus 198 -~~~~VsVID~~t~kvv~~I~v~g~~-~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~-~~~~~~ 274 (426)
T 3c75_H 198 -PAPAVGVVDLEGKTFDRMLDVPDCY-HIFPASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLIN-HPAFSL 274 (426)
T ss_dssp -SSCEEEEEETTTTEEEEEEECCSEE-EEEEEETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCS-CCEECT
T ss_pred -CCCeEEEEECCCCeEEEEEEcCCce-eeccCCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceee-EeeecC
Confidence 2689999999999999988875531 222222 2233333 8888888886665442 22222222111 112234
Q ss_pred CccEEEEcCCCCccEEEEEEccCCccc--c---------------cCceEEEEeCCCCCEEEEEeC----------CCcE
Q 019672 146 NACFLAVPASTTKGSVLVYNVMELHSH--C---------------EAPLAAIVLSSNGMYIATASE----------QGTI 198 (337)
Q Consensus 146 ~~~~la~~~~~~dg~v~i~d~~~~~~~--~---------------~~~i~~~~~s~dg~~lat~s~----------dg~~ 198 (337)
++..+++.. ..+.|.+.|+...... . ......++++|||+++..+.. .++
T Consensus 275 dg~~~~~~s--~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~- 351 (426)
T 3c75_H 275 RSGRLVWPT--YTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRF- 351 (426)
T ss_dssp TTCEEEEEB--TTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEE-
T ss_pred CCCEEEEEe--CCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCE-
Confidence 444444444 3688999998643211 0 022233789999987776642 234
Q ss_pred EEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEe-CCCcEEEEecCCCccc
Q 019672 199 IRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAINQ 257 (337)
Q Consensus 199 i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~~~~~~ 257 (337)
|-+.|+.+++.+.++..+ .....|+|+|||+ .+|+++. .+++|.|+|+.+.+..
T Consensus 352 VsVID~~T~kvv~~I~vg---~~P~gia~spDg~--~~lyv~n~~s~~VsVID~~t~kvv 406 (426)
T 3c75_H 352 VVVLNAETGERINKIELG---HEIDSINVSQDAE--PLLYALSAGTQTLHIYDAATGEEL 406 (426)
T ss_dssp EEEEETTTCCEEEEEEEE---EEECEEEECCSSS--CEEEEEETTTTEEEEEETTTCCEE
T ss_pred EEEEECCCCeEEEEEECC---CCcCeEEEccCCC--EEEEEEcCCCCeEEEEECCCCCEE
Confidence 689999999999888643 2468899999996 2455555 5899999999887653
No 204
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.22 E-value=4e-08 Score=89.25 Aligned_cols=268 Identities=10% Similarity=0.012 Sum_probs=161.3
Q ss_pred EEcCCCCEEEEEcC--C----ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCC---CCCCCCceEEEEECCC
Q 019672 14 SFNQDNSGFALSTK--D----GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGE---QPSLSPRRLCLFNTTT 84 (337)
Q Consensus 14 ~fs~dg~~la~g~~--~----g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~---~~~~~d~~v~iwd~~~ 84 (337)
...|++.++.+... . .+.+||..+++++.....+....+.+.++...+.++.... ..+..++.|.+||..+
T Consensus 27 ~~~~~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~p~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD~~t 106 (373)
T 2mad_H 27 APGADGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFLPNPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFDPVT 106 (373)
T ss_pred cCCCCCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCCCCeEECCCCCEEEEEeccccccccCCCCCeEEEEECCC
Confidence 44588887665542 2 5589999999887666543333667777777776654200 0001367899999999
Q ss_pred CCEEEEEEcC--------CceeEEEEcCC--eEEEEE---CCeEEEEECCCCeeeee-ecCCCCCceEEEEeeCCCccEE
Q 019672 85 GTALRELNFL--------TSILAVRLNKK--RLVIVL---REKTYIYDANTLAILDT-IDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 85 ~~~~~~~~~~--------~~v~~i~~~~~--~~~v~~---d~~i~i~d~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l 150 (337)
.+.+.++... .....+.++++ .++++. ++.|.++| .+++.+.. +..+. . ..+.+.+...++
T Consensus 107 ~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~---~-~~~~~~~~~~~~ 181 (373)
T 2mad_H 107 FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT---C-YHIHPGAPSTFY 181 (373)
T ss_pred CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc---e-EEEEeCCCceEE
Confidence 9988887654 12346777765 566654 36899999 99988877 65432 2 334444444444
Q ss_pred EEcCCCCccEEEEEEccCCccccc----------Cce-EEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc--eeEeecc--
Q 019672 151 AVPASTTKGSVLVYNVMELHSHCE----------APL-AAIVLSSNGMYIATASEQGTIIRVFLVSEAT--KSYSFRR-- 215 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~~~~~~----------~~i-~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~--~~~~~~~-- 215 (337)
+.+ .||.+.++|. +++.... .++ ....+.+++..++..+..+. +.+.|+.++. .+..+..
T Consensus 182 ~~~---~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~-v~vid~~~~~~~v~~~~~~~~ 256 (373)
T 2mad_H 182 LLC---AQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGK-ILQADISAAGATNKAPIDALS 256 (373)
T ss_pred EEc---CCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCce-EEEEeccCCcceEeeeeeecC
Confidence 444 3889999999 6654421 111 23456676665555556676 5789987653 2222211
Q ss_pred ------CCcceeEEEEEeecCCCcccEEEEEeC----------CCcEEEEecCCCcccCCCCcccccccccccccceeec
Q 019672 216 ------GTYPSTIFSLSFGQSMQFQDILVATSS----------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVL 279 (337)
Q Consensus 216 ------~~~~~~i~~l~fs~dg~~~~~las~s~----------dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w 279 (337)
+..+.....++|+||++ .|.++.. .+.|.++|+.+.+...+. .++. .-|
T Consensus 257 ~~~~~~~~~p~g~~~~~~s~d~~---~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i---------~~g~---~p~ 321 (373)
T 2mad_H 257 GGRKADTWRPGGWQQVAYLKSSD---GIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQI---------SLGH---DVD 321 (373)
T ss_pred CcccccceecCceEeEEECCCCC---EEEEEeccCCcccccCCCCeEEEEECCCCEEEEEE---------ECCC---CcC
Confidence 00112244578999998 6666543 357999998766542210 0011 011
Q ss_pred ccccceeeeeccCCCcccC-EEEEEE-eCCcEEEEEEec
Q 019672 280 DPADHHVLRNAFPAGVKRA-SVSVIT-YNGYFVEYIFSI 316 (337)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~-~l~~~~-~dg~~~~~~~~~ 316 (337)
.+.+.++++ .+++.. .++.+.+|++.+
T Consensus 322 ----------~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t 350 (373)
T 2mad_H 322 ----------AISVAQDGGPDLYALSAGTEVLHIYDAGA 350 (373)
T ss_pred ----------eEEECCCCCeEEEEEcCCCCeEEEEECCC
Confidence 122355567 677776 489988887654
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.21 E-value=1.6e-08 Score=88.74 Aligned_cols=214 Identities=11% Similarity=0.043 Sum_probs=132.8
Q ss_pred eEEEEEcCCCCE-EEEEcCC-ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE
Q 019672 10 VFFVSFNQDNSG-FALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 10 v~~~~fs~dg~~-la~g~~~-g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~ 87 (337)
-.+..|++++.. +.+...+ .+..||.++++.........+..+.+..+.+++ ++. ++.|.+||.++++.
T Consensus 15 ~Egp~w~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~i~~~~dG~l~--v~~-------~~~l~~~d~~~g~~ 85 (297)
T 3g4e_A 15 GESPVWEEVSNSLLFVDIPAKKVCRWDSFTKQVQRVTMDAPVSSVALRQSGGYV--ATI-------GTKFCALNWKEQSA 85 (297)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECSSCEEEEEEBTTSSEE--EEE-------TTEEEEEETTTTEE
T ss_pred ccCCeEECCCCEEEEEECCCCEEEEEECCCCcEEEEeCCCceEEEEECCCCCEE--EEE-------CCeEEEEECCCCcE
Confidence 457889996654 5555544 478999988765332223455566666666633 332 46899999988765
Q ss_pred EEEEEcC-----CceeEEEEcCCe-EEEEE--C---------CeEEEEECCC-CeeeeeecCCCCCceEEEEeeCCCccE
Q 019672 88 LRELNFL-----TSILAVRLNKKR-LVIVL--R---------EKTYIYDANT-LAILDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 88 ~~~~~~~-----~~v~~i~~~~~~-~~v~~--d---------~~i~i~d~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
....... ..+.++.+++++ +.++. . ....||.+.. ++....... ......++++|++..
T Consensus 86 ~~~~~~~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~---~~~pngi~~spdg~~ 162 (297)
T 3g4e_A 86 VVLATVDNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ---VDISNGLDWSLDHKI 162 (297)
T ss_dssp EEEEECCTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE---ESBEEEEEECTTSCE
T ss_pred EEEEecCCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec---cccccceEEcCCCCE
Confidence 4333321 246788888765 44443 1 2234554432 332222211 112235566677766
Q ss_pred EEEcCCCCccEEEEEEc--cCCccc-----c-----cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCC
Q 019672 150 LAVPASTTKGSVLVYNV--MELHSH-----C-----EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT 217 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~--~~~~~~-----~-----~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~ 217 (337)
+.++.. .++.|.+||+ .++... . ......++++++|++.++....+. |.+||..+|+.+..+...
T Consensus 163 lyv~~~-~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~-v~~~d~~tG~~~~~i~~p- 239 (297)
T 3g4e_A 163 FYYIDS-LSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGR-VIRLDPVTGKRLQTVKLP- 239 (297)
T ss_dssp EEEEEG-GGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTE-EEEECTTTCCEEEEEECS-
T ss_pred EEEecC-CCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCE-EEEEcCCCceEEEEEECC-
Confidence 655543 4788999987 343321 1 145789999999998887777776 579999999988877543
Q ss_pred cceeEEEEEee-cCCCcccEEEEEeC
Q 019672 218 YPSTIFSLSFG-QSMQFQDILVATSS 242 (337)
Q Consensus 218 ~~~~i~~l~fs-~dg~~~~~las~s~ 242 (337)
...+++++|+ ||++ .|..++.
T Consensus 240 -~~~~t~~~f~g~d~~---~L~vt~~ 261 (297)
T 3g4e_A 240 -VDKTTSCCFGGKNYS---EMYVTCA 261 (297)
T ss_dssp -SSBEEEEEEESGGGC---EEEEEEB
T ss_pred -CCCceEEEEeCCCCC---EEEEEcC
Confidence 2358999999 8988 6655554
No 206
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.21 E-value=6.5e-09 Score=94.16 Aligned_cols=256 Identities=10% Similarity=0.063 Sum_probs=150.2
Q ss_pred CCCEEEEEcCC-ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCc
Q 019672 18 DNSGFALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTS 96 (337)
Q Consensus 18 dg~~la~g~~~-g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~ 96 (337)
++..+.+++.+ .+..+|.++++++.................+.+ +++. .++.|..+|.++|+.+.+.....+
T Consensus 102 ~~~~v~v~~~~g~l~a~d~~tG~~~W~~~~~~~~~~~p~~~~~~v-~v~~------~~g~l~~~d~~tG~~~W~~~~~~~ 174 (376)
T 3q7m_A 102 SGGHVYIGSEKAQVYALNTSDGTVAWQTKVAGEALSRPVVSDGLV-LIHT------SNGQLQALNEADGAVKWTVNLDMP 174 (376)
T ss_dssp ETTEEEEEETTSEEEEEETTTCCEEEEEECSSCCCSCCEEETTEE-EEEC------TTSEEEEEETTTCCEEEEEECCC-
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEEeCCCceEcCCEEECCEE-EEEc------CCCeEEEEECCCCcEEEEEeCCCC
Confidence 34455556554 579999999998876654321100001112333 3443 378999999999999888776544
Q ss_pred e------eEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCc-----eEEEEeeCC--CccEEEEcCCCCccEEE
Q 019672 97 I------LAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLK-----GLCAFSPSL--NACFLAVPASTTKGSVL 162 (337)
Q Consensus 97 v------~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~-----~~~~~~~~~--~~~~la~~~~~~dg~v~ 162 (337)
+ .......+.++++. ++.+..+|..+++.+.......... .+..+...| .+..+..++ .++.+.
T Consensus 175 ~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~--~~g~l~ 252 (376)
T 3q7m_A 175 SLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALA--YNGNLT 252 (376)
T ss_dssp ----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEEC--TTSCEE
T ss_pred ceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEe--cCcEEE
Confidence 3 22233456666665 7799999999998877664321100 000000001 122444444 378899
Q ss_pred EEEccCCccccc---CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEE
Q 019672 163 VYNVMELHSHCE---APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVA 239 (337)
Q Consensus 163 i~d~~~~~~~~~---~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las 239 (337)
.+|..+++.... .....+.. ++..|..++.+|. +..+|..+|+.+.+..... ...+.+.... +. .|..
T Consensus 253 ~~d~~tG~~~w~~~~~~~~~~~~--~~~~l~~~~~~g~-l~~~d~~tG~~~w~~~~~~-~~~~~~~~~~--~~---~l~v 323 (376)
T 3q7m_A 253 ALDLRSGQIMWKRELGSVNDFIV--DGNRIYLVDQNDR-VMALTIDGGVTLWTQSDLL-HRLLTSPVLY--NG---NLVV 323 (376)
T ss_dssp EEETTTCCEEEEECCCCEEEEEE--ETTEEEEEETTCC-EEEEETTTCCEEEEECTTT-TSCCCCCEEE--TT---EEEE
T ss_pred EEECCCCcEEeeccCCCCCCceE--ECCEEEEEcCCCe-EEEEECCCCcEEEeecccC-CCcccCCEEE--CC---EEEE
Confidence 999998876543 33444444 3567778888887 5799999999887664211 1112222222 34 6889
Q ss_pred EeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEE
Q 019672 240 TSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYI 313 (337)
Q Consensus 240 ~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~ 313 (337)
++.+|.|+++|.++++..-+ + ...+.. ++.. + -..+.+|++++.||.++.|+
T Consensus 324 ~~~~g~l~~~d~~tG~~~~~------~--~~~~~~---~~~~----------~-~~~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 324 GDSEGYLHWINVEDGRFVAQ------Q--KVDSSG---FQTE----------P-VAADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp ECTTSEEEEEETTTCCEEEE------E--ECCTTC---BCSC----------C-EEETTEEEEEBTTSCEEEEE
T ss_pred EeCCCeEEEEECCCCcEEEE------E--ecCCCc---ceeC----------C-EEECCEEEEEeCCCEEEEEe
Confidence 99999999999887653210 0 000000 0000 0 01237899999999999885
No 207
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.21 E-value=3.6e-09 Score=90.93 Aligned_cols=216 Identities=8% Similarity=0.001 Sum_probs=131.6
Q ss_pred CCceEEEEECCCCCEEEEE-EcCCceeEEEEcCC-eEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccE
Q 019672 73 SPRRLCLFNTTTGTALREL-NFLTSILAVRLNKK-RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~-~~~~~v~~i~~~~~-~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
.++.|.+||..++...... .....+.++.++++ .++++. ++.|.+||....... .+.. .......++..++++.+
T Consensus 44 ~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~i~~~d~~~~~~~-~~~~-~~~~~p~~i~~~~~g~l 121 (270)
T 1rwi_B 44 MYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDFNNRVVTLAAGSNNQT-VLPF-DGLNYPEGLAVDTQGAV 121 (270)
T ss_dssp SSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEETTTEEEEECTTCSCCE-ECCC-CSCSSEEEEEECTTCCE
T ss_pred CCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcCCCEEEEEeCCCceEe-eeec-CCcCCCcceEECCCCCE
Confidence 3689999998665432211 11235678888765 455555 679999998765432 2221 11123556667777766
Q ss_pred EEEcCCCCccEEEEEEccCCcccc-----cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEE
Q 019672 150 LAVPASTTKGSVLVYNVMELHSHC-----EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFS 224 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~~-----~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~ 224 (337)
+++.. .++.|.+||..+..... ...+.+++++|+|+++++...++. |.+||...+........+ ...+.+
T Consensus 122 ~v~~~--~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~-i~~~~~~~~~~~~~~~~~--~~~p~~ 196 (270)
T 1rwi_B 122 YVADR--GNNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNR-VVKLEAESNNQVVLPFTD--ITAPWG 196 (270)
T ss_dssp EEEEG--GGTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTE-EEEECTTTCCEEECCCSS--CCSEEE
T ss_pred EEEEC--CCCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCE-EEEEecCCCceEeecccC--CCCceE
Confidence 66544 36889999866543321 146789999999998777766666 689998776544322111 245789
Q ss_pred EEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEE
Q 019672 225 LSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVIT 304 (337)
Q Consensus 225 l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~ 304 (337)
|+++++|. ++++...++.|.+|+........ . ........ ..+...++++.+++..
T Consensus 197 i~~d~~g~---l~v~~~~~~~v~~~~~~~~~~~~--------~---~~~~~~~p----------~~i~~~~~g~l~v~~~ 252 (270)
T 1rwi_B 197 IAVDEAGT---VYVTEHNTNQVVKLLAGSTTSTV--------L---PFTGLNTP----------LAVAVDSDRTVYVADR 252 (270)
T ss_dssp EEECTTCC---EEEEETTTSCEEEECTTCSCCEE--------C---CCCSCSCE----------EEEEECTTCCEEEEEG
T ss_pred EEECCCCC---EEEEECCCCcEEEEcCCCCccee--------e---ccCCCCCc----------eeEEECCCCCEEEEEC
Confidence 99999998 88888888999999975432211 0 00000000 1122244556556667
Q ss_pred eCCcEEEEEEecCCC
Q 019672 305 YNGYFVEYIFSINNC 319 (337)
Q Consensus 305 ~dg~~~~~~~~~~~~ 319 (337)
.++.|++|+++.++.
T Consensus 253 ~~~~v~~~~~~~~~~ 267 (270)
T 1rwi_B 253 GNDRVVKLTSLEHHH 267 (270)
T ss_dssp GGTEEEEECCCGGGS
T ss_pred CCCEEEEEcCCCccc
Confidence 799999998866543
No 208
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.18 E-value=7.3e-09 Score=101.82 Aligned_cols=229 Identities=7% Similarity=-0.004 Sum_probs=134.8
Q ss_pred cCCCCEEEEEcC-Cc---eEEEe--CCCCc--EEEEEe----eC--CEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 16 NQDNSGFALSTK-DG---FKIFD--SSTGR--LCYERA----VG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 16 s~dg~~la~g~~-~g---~~vw~--~~~~~--~~~~~~----~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
+|||++++-... .+ -.+|. ...++ .+.... .+ .+....++++++.+++..... +..+.+|++||
T Consensus 76 ~~dG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~l~d~~~~a~~~~~~~~~~~~SPDG~~la~~~~~~--G~~~~~i~v~d 153 (695)
T 2bkl_A 76 SRRNGRFFYVRTHKDKEKAILYWRQGESGQEKVLLDPNGWSKDGTVSLGTWAVSWDGKKVAFAQKPN--AADEAVLHVID 153 (695)
T ss_dssp EEETTEEEEEEECTTCSSCEEEEEESTTSCCEEEECGGGSSSSSCEEEEEEEECTTSSEEEEEEEET--TCSCCEEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCCCCcEEEEchHHhccCCCEEEEEEEECCCCCEEEEEECCC--CCceEEEEEEE
Confidence 478988775543 22 25564 33443 232211 11 245567778888888764310 02457999999
Q ss_pred CCCCCEE-EEEEcCCceeEEEEcCCe--EEEEE-CCe-------------EEEEECCCCee--eeeecCCCCCceEEEEe
Q 019672 82 TTTGTAL-RELNFLTSILAVRLNKKR--LVIVL-REK-------------TYIYDANTLAI--LDTIDTVPNLKGLCAFS 142 (337)
Q Consensus 82 ~~~~~~~-~~~~~~~~v~~i~~~~~~--~~v~~-d~~-------------i~i~d~~~~~~--~~~~~~~~~~~~~~~~~ 142 (337)
+.+++.+ ...........+.|++++ ++.+. +.. |++|++.+++. ...+....+......+.
T Consensus 154 l~tg~~~~~~~~~~~~~~~~~wspDg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~ 233 (695)
T 2bkl_A 154 VDSGEWSKVDVIEGGKYATPKWTPDSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSD 233 (695)
T ss_dssp TTTCCBCSSCCBSCCTTCCCEECTTSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEE
T ss_pred CCCCCCcCCcccCcccccceEEecCCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEE
Confidence 9999864 211011122568888774 44444 443 99999987752 12223333334566777
Q ss_pred eCCCccEEEEcCCCC--ccEEEEEEccCCccc----ccCceEEEEeCCCCCEEEEEeC---CCcEEEEEEcCCCce--eE
Q 019672 143 PSLNACFLAVPASTT--KGSVLVYNVMELHSH----CEAPLAAIVLSSNGMYIATASE---QGTIIRVFLVSEATK--SY 211 (337)
Q Consensus 143 ~~~~~~~la~~~~~~--dg~v~i~d~~~~~~~----~~~~i~~~~~s~dg~~lat~s~---dg~~i~vwd~~~~~~--~~ 211 (337)
++|++.+|++.+... ...|.++|..++... +...+....+ ++|.+++.+.. ++. |.+||+.+++. ..
T Consensus 234 ~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~~-~~g~l~~~s~~~~~~~~-l~~~d~~~~~~~~~~ 311 (695)
T 2bkl_A 234 LSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVHA-WKDRFYVLTDEGAPRQR-VFEVDPAKPARASWK 311 (695)
T ss_dssp ECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEEE-ETTEEEEEECTTCTTCE-EEEEBTTBCSGGGCE
T ss_pred ECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEEe-cCCcEEEEECCCCCCCE-EEEEeCCCCCccCCe
Confidence 888888888766311 226777766544321 1244555566 66664444432 455 57999987753 23
Q ss_pred eeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 212 SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 212 ~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
.+..+.....|.+++|+ ++. ++++...|+..+||.++
T Consensus 312 ~l~~~~~~~~l~~~~~~-~~~---lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 312 EIVPEDSSASLLSVSIV-GGH---LSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEECCCSSCEEEEEEEE-TTE---EEEEEEETTEEEEEEEE
T ss_pred EEecCCCCCeEEEEEEE-CCE---EEEEEEECCEEEEEEEe
Confidence 33322223458888998 666 89999999998888765
No 209
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=99.12 E-value=5.7e-12 Score=114.59 Aligned_cols=257 Identities=11% Similarity=0.032 Sum_probs=130.5
Q ss_pred CCCEEEEEcCCc-eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCC-
Q 019672 18 DNSGFALSTKDG-FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT- 95 (337)
Q Consensus 18 dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~- 95 (337)
++..+++++.++ +..||..+|+++.......+...-+..+ +.+++++. .|+.|..||.++|+.+..+.++.
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~~~~~s~p~~~~-g~~~v~~s------~dg~l~a~d~~tG~~~w~~~~~~~ 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKEDPVLQVPTHVE-EPAFLPDP------NDGSLYTLGSKNNEGLTKLPFTIP 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEECCCSCCCC------CCEEECT------TTCCEEEC-----CCSEECSCCHH
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecCCCceecceEcC-CCEEEEeC------CCCEEEEEECCCCceeeeeeccCc
Confidence 466777777765 6999999999987765432211111112 22233332 58999999999998776654431
Q ss_pred -cee-EEEE-cCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc
Q 019672 96 -SIL-AVRL-NKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS 171 (337)
Q Consensus 96 -~v~-~i~~-~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~ 171 (337)
.+. ...+ ..+.++++. ++.++.||..+++.+..+..+. ...+++ ++..+++++ .++.|..||..+++.
T Consensus 81 ~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~----~~~~~p--~~~~v~~~~--~dg~v~a~d~~tG~~ 152 (369)
T 2hz6_A 81 ELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF----ADSLSP--STSLLYLGR--TEYTITMYDTKTREL 152 (369)
T ss_dssp HHHTTCSCC-----CCCCEEEEEEEEECCC----------------------------EEEEE--EEEEEECCCSSSSSC
T ss_pred cccccCceEecCCEEEEEeCCCEEEEEECCCCcEEEEecCCC----cccccc--cCCEEEEEe--cCCEEEEEECCCCCE
Confidence 010 0011 233344434 7899999999998887775432 122233 455666665 489999999999876
Q ss_pred ccc---CceEEEEeCCCC---CEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEE----EEEe
Q 019672 172 HCE---APLAAIVLSSNG---MYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDIL----VATS 241 (337)
Q Consensus 172 ~~~---~~i~~~~~s~dg---~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~l----as~s 241 (337)
... ......++++++ ..++.++.||. ++.||..+|+.+.++..+. ..+....++++|. .. ..+
T Consensus 153 ~W~~~~~~~~~~~~~~~~~~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~~~~--pv~~~~~~~~dg~---~~v~~~~~~- 225 (369)
T 2hz6_A 153 RWNATYFDYAASLPEDDVDYKMSHFVSNGDGL-VVTVDSESGDVLWIQNYAS--PVVAFYVWQREGL---RKVMHINVA- 225 (369)
T ss_dssp CCEEEEEEECCBCCCCCTTCCCCEEEEETSCE-EEEECTTTCCEEEEEECSS--CEEEEEECTTSSC---EEECCEEEE-
T ss_pred EEeEecccccCccccCCccccceEEEECCCCE-EEEEECCCCcEEEEecCCC--ceEEEEEecCCce---Eeccceeec-
Confidence 543 222333444432 45777889997 5899999999988775321 1233456667774 32 222
Q ss_pred CCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 242 SSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 242 ~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
++.++.+|..+++... ...|...........+ ..+..|++++.||.++.++....
T Consensus 226 -~~~l~~ld~~tG~~~~-----------------~~~W~~~~~~~~~sp~---~~~g~lyv~~~~G~l~al~~~~~ 280 (369)
T 2hz6_A 226 -VETLRYLTFMSGEVGR-----------------ITKWKYPFPKETEAKS---KLTPTLYVGKYSTSLYASPSMVH 280 (369)
T ss_dssp -HHHHHHHHHHHHHHHH-----------------HHTSCCCCCCHHHHHH---HSEEEECBEECSSCEECCEEEEC
T ss_pred -ccceeeeehhcCCccc-----------------ceeeeeccCccccccc---cccceEEEecccCCEEecCcccc
Confidence 3456666654432000 0122221100000000 12368999999999999888743
No 210
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=99.11 E-value=1.2e-07 Score=85.84 Aligned_cols=217 Identities=9% Similarity=0.043 Sum_probs=134.6
Q ss_pred CCEEEEEcCC-ceEEEeCCCCcEEEEEeeCC----------EEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE
Q 019672 19 NSGFALSTKD-GFKIFDSSTGRLCYERAVGA----------FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 19 g~~la~g~~~-g~~vw~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~ 87 (337)
+..+.+++.+ .+..||.++++++....... ..........+.+.+.+ .++.|..+|.++|+.
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~-------~~g~l~a~d~~tG~~ 125 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGS-------EKAQVYALNTSDGTV 125 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEE-------TTSEEEEEETTTCCE
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEc-------CCCEEEEEECCCCCE
Confidence 4556666655 57999999999887655421 11122223344444443 378999999999999
Q ss_pred EEEEEcCCcee-EEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceE---EEEeeCCCccEEEEcCCCCccEEE
Q 019672 88 LRELNFLTSIL-AVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGL---CAFSPSLNACFLAVPASTTKGSVL 162 (337)
Q Consensus 88 ~~~~~~~~~v~-~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~la~~~~~~dg~v~ 162 (337)
+.+......+. ......+.+++.. ++.+..+|..+++.+............ ...... ++ .+.++. .+|.|.
T Consensus 126 ~W~~~~~~~~~~~p~~~~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~-~~-~v~~g~--~~g~l~ 201 (376)
T 3q7m_A 126 AWQTKVAGEALSRPVVSDGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA-FG-AAVVGG--DNGRVS 201 (376)
T ss_dssp EEEEECSSCCCSCCEEETTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE-TT-EEEECC--TTTEEE
T ss_pred EEEEeCCCceEcCCEEECCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE-CC-EEEEEc--CCCEEE
Confidence 88777654332 2234566666666 789999999999888776543221100 011111 22 444544 478999
Q ss_pred EEEccCCcccccCce---------E---EEEeCC--CCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEee
Q 019672 163 VYNVMELHSHCEAPL---------A---AIVLSS--NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFG 228 (337)
Q Consensus 163 i~d~~~~~~~~~~~i---------~---~~~~s~--dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs 228 (337)
.+|..+++...+.+. . .+.-.| .+..+..++.+|. +..+|..+|+.+.+.... ...++...
T Consensus 202 ~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~-l~~~d~~tG~~~w~~~~~----~~~~~~~~ 276 (376)
T 3q7m_A 202 AVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGN-LTALDLRSGQIMWKRELG----SVNDFIVD 276 (376)
T ss_dssp EEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSC-EEEEETTTCCEEEEECCC----CEEEEEEE
T ss_pred EEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcE-EEEEECCCCcEEeeccCC----CCCCceEE
Confidence 999988876532100 0 011222 3456777788887 579999999988776432 13334443
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 229 QSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 229 ~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
+. .+..++.++.|..+|.++++.
T Consensus 277 --~~---~l~~~~~~g~l~~~d~~tG~~ 299 (376)
T 3q7m_A 277 --GN---RIYLVDQNDRVMALTIDGGVT 299 (376)
T ss_dssp --TT---EEEEEETTCCEEEEETTTCCE
T ss_pred --CC---EEEEEcCCCeEEEEECCCCcE
Confidence 44 688888899999999887653
No 211
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=99.11 E-value=1.2e-08 Score=91.43 Aligned_cols=235 Identities=10% Similarity=0.031 Sum_probs=141.4
Q ss_pred CCeEEEEEcCCCCEEEEEc--CCc-eEEEeCCCCcEEEE----E----eeCCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 8 YPVFFVSFNQDNSGFALST--KDG-FKIFDSSTGRLCYE----R----AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~--~~g-~~vw~~~~~~~~~~----~----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
.....++++++|+.+++.. .++ .+||.++++++..- . +.....-+.+..+.. +.++..+. ....+.+
T Consensus 17 ~~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~~~~p~~~~~~~~~~~~p~gv~~d~~g~-L~v~D~g~-~~~~~~~ 94 (343)
T 2qe8_A 17 LAPGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGLIPFPPQSGNAIITFDTVLGIKSDGNGI-VWMLDNGN-QSKSVPK 94 (343)
T ss_dssp SCEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEEEESCCCCSSCCCCCSCEEEEEECSSSE-EEEEECHH-HHTSCCE
T ss_pred CCcceEEECCCCCEEEEeCCCCCCceEEEEECCCCeecCCCcccCcccceeEeeEEEEcCCCc-EEEEcCCC-CcCCCCe
Confidence 4678999999999988863 223 46666555553310 0 012233344443333 33333210 0001468
Q ss_pred EEEEECCCCCEEEEEEcCC-------ceeEEEEcC--CeEEEEE-----CCeEEEEECCCCeeeeeecCCCC--------
Q 019672 77 LCLFNTTTGTALRELNFLT-------SILAVRLNK--KRLVIVL-----REKTYIYDANTLAILDTIDTVPN-------- 134 (337)
Q Consensus 77 v~iwd~~~~~~~~~~~~~~-------~v~~i~~~~--~~~~v~~-----d~~i~i~d~~~~~~~~~~~~~~~-------- 134 (337)
|.+||+++++.+..+..+. .+.++.+++ ..++++. ++.|.+||+.+++..+.+..+..
T Consensus 95 i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~ 174 (343)
T 2qe8_A 95 LVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDL 174 (343)
T ss_dssp EEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCC
T ss_pred EEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccce
Confidence 9999999999888777642 357888884 3455553 45899999988776554432100
Q ss_pred -------------------CceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCc--------cc-------ccCceEEE
Q 019672 135 -------------------LKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH--------SH-------CEAPLAAI 180 (337)
Q Consensus 135 -------------------~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~--------~~-------~~~~i~~~ 180 (337)
..+...++.+|++..|+++.. ....+..++..... .. +......+
T Consensus 175 ~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~-~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g~pdgi 253 (343)
T 2qe8_A 175 VIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPM-HSTSMYRIKSADLSNLQLTDAELGSKIERYSEKPICDGI 253 (343)
T ss_dssp EETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEES-SCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECCSCSCE
T ss_pred eECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeC-CCCeEEEEEHHHhcCCCCChhhhhcceEecccCCCCceE
Confidence 012456677778877766653 23456666542110 00 11345679
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEe
Q 019672 181 VLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFS 250 (337)
Q Consensus 181 ~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~ 250 (337)
+++++|+++++...++. |.+||.++|+.. .+..........+|+|+++|+ ++++.+..+.+.+|.
T Consensus 254 a~d~~G~l~va~~~~~~-V~~~d~~~G~~~-~~~~~~~~~~p~~va~~~~g~---l~v~~~~~~~~~~f~ 318 (343)
T 2qe8_A 254 SIDKDHNIYVGDLAHSA-IGVITSADRAYK-LLVTDEKLSWTDSFNFGSDGY---LYFDCNQLHHSAPLN 318 (343)
T ss_dssp EECTTCCEEEEEGGGTE-EEEEETTTTEEE-EEEECGGGSCEEEEEECTTSC---EEEEECCGGGSGGGB
T ss_pred EECCCCCEEEEccCCCe-EEEEECCCCCEE-EEEECCceecCCeeEECCCCc---EEEEeCccccccccc
Confidence 99999999998888887 689998667643 222221123478999999998 777777665554444
No 212
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=99.11 E-value=1.9e-09 Score=97.48 Aligned_cols=222 Identities=14% Similarity=0.032 Sum_probs=141.5
Q ss_pred EEEEcCCCCEEEEEc-----------CCceEEEeCCCCcEEEEEeeC---------CEEEEEEccCCCEEEEEeCCCCCC
Q 019672 12 FVSFNQDNSGFALST-----------KDGFKIFDSSTGRLCYERAVG---------AFSIVEMLYSSSLLAIVGAGEQPS 71 (337)
Q Consensus 12 ~~~fs~dg~~la~g~-----------~~g~~vw~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~g~~~~ 71 (337)
.+.|+|||+++.++. ++.+.+||+.+++.+.+...+ .-..+.+.+++..+.....+
T Consensus 69 ~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~---- 144 (368)
T 1mda_H 69 LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFG---- 144 (368)
T ss_dssp EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECS----
T ss_pred ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccC----
Confidence 699999999988775 244799999999988776543 12345667777766655421
Q ss_pred CCCceEEE--EECCCCCEEEEEEcCCceeEEEEcCCeEEEEE--CCeEEEEECCC-----Ceeee----eecCCCCCceE
Q 019672 72 LSPRRLCL--FNTTTGTALRELNFLTSILAVRLNKKRLVIVL--REKTYIYDANT-----LAILD----TIDTVPNLKGL 138 (337)
Q Consensus 72 ~~d~~v~i--wd~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~--d~~i~i~d~~~-----~~~~~----~~~~~~~~~~~ 138 (337)
..+.|.+ +|..+ +.++.....+ .+...++..+++. |+++.+.|+.+ ++... .+.....+.
T Consensus 145 -~~~~v~V~~iD~~t---v~~i~v~~~~-~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~-- 217 (368)
T 1mda_H 145 -SSAAAGLSVPGASD---DQLTKSASCF-HIHPGAAATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAA-- 217 (368)
T ss_dssp -SSCEEEEEETTTEE---EEEEECSSCC-CCEEEETTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCE--
T ss_pred -CCCeEEEEEEchhh---ceEEECCCce-EEccCCCeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCcc--
Confidence 2467888 99987 5566543321 1223333344433 77888888876 43331 122222232
Q ss_pred EEEeeCCCccEEEEcCCCCccEEEEEEccCCc--cccc---------------CceEEEEeCCCCCEEEEEeC-C-----
Q 019672 139 CAFSPSLNACFLAVPASTTKGSVLVYNVMELH--SHCE---------------APLAAIVLSSNGMYIATASE-Q----- 195 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~--~~~~---------------~~i~~~~~s~dg~~lat~s~-d----- 195 (337)
+ .+++..+++.+ . +.|.+.|+.+.. .... .....++|+|||+++..+.. .
T Consensus 218 -~---~~~~~~~~~vs--~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~ 290 (368)
T 1mda_H 218 -Q---ANYPGMLVWAV--A-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCL 290 (368)
T ss_dssp -E---ETTTTEEEECB--S-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTT
T ss_pred -c---cccCCEEEEEc--C-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCCCEEEEEeccccCccc
Confidence 2 23344555555 3 789999986432 1110 11223789999998876543 2
Q ss_pred ---CcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEe-CCCcEEEEecCCCccc
Q 019672 196 ---GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFAINQ 257 (337)
Q Consensus 196 ---g~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~~~~~~ 257 (337)
+.. .++|+.+++.+.++..+. ....|+|+|||+ ..+++.. .+++|.|+|+.+.+..
T Consensus 291 ~~~~~~-~ViD~~t~~vv~~i~vg~---~p~gi~~s~Dg~--~l~va~~~~~~~VsVID~~t~kvv 350 (368)
T 1mda_H 291 AAAENT-SSVTASVGQTSGPISNGH---DSDAIIAAQDGA--SDNYANSAGTEVLDIYDAASDQDQ 350 (368)
T ss_dssp SCEEEE-EEEESSSCCEEECCEEEE---EECEEEECCSSS--CEEEEEETTTTEEEEEESSSCEEE
T ss_pred ccCCCE-EEEECCCCeEEEEEECCC---CcceEEECCCCC--EEEEEccCCCCeEEEEECCCCcEE
Confidence 243 499999999988876432 478899999997 1456666 5899999999877643
No 213
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.10 E-value=1.4e-07 Score=82.55 Aligned_cols=172 Identities=11% Similarity=0.100 Sum_probs=110.8
Q ss_pred CCceEEEEECCCCCEEEEEE-----cCCceeEEEEcCC--eEEEEE-CCeEEEEECCCCeeeee-ecCCCC--CceEEEE
Q 019672 73 SPRRLCLFNTTTGTALRELN-----FLTSILAVRLNKK--RLVIVL-REKTYIYDANTLAILDT-IDTVPN--LKGLCAF 141 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~-----~~~~v~~i~~~~~--~~~v~~-d~~i~i~d~~~~~~~~~-~~~~~~--~~~~~~~ 141 (337)
.++.|.+||..+++...... ....+.++.++++ .+.++. .+.|.+||.. ++.... ...... ......+
T Consensus 44 ~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~i 122 (314)
T 1pjx_A 44 PAGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVVQTD-GTFEEIAKKDSEGRRMQGCNDC 122 (314)
T ss_dssp ECCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEEETT-SCEEECCSBCTTSCBCBCCCEE
T ss_pred CCCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEEeCC-CCEEEEEeccCCCccccCCcCE
Confidence 36799999988887543222 2246888999876 456666 5689999988 654332 221111 1224466
Q ss_pred eeCCCccEEEEcCCCCc---------------cEEEEEEccCCcccc----cCceEEEEeC----CCCCEEEEE-eCCCc
Q 019672 142 SPSLNACFLAVPASTTK---------------GSVLVYNVMELHSHC----EAPLAAIVLS----SNGMYIATA-SEQGT 197 (337)
Q Consensus 142 ~~~~~~~~la~~~~~~d---------------g~v~i~d~~~~~~~~----~~~i~~~~~s----~dg~~lat~-s~dg~ 197 (337)
..++++.+.++... + +.|..||.. ++... ......++++ |+|+.|..+ +.++.
T Consensus 123 ~~d~~g~l~v~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~ 199 (314)
T 1pjx_A 123 AFDYEGNLWITAPA--GEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFPNGIAVRHMNDGRPYQLIVAETPTKK 199 (314)
T ss_dssp EECTTSCEEEEECB--CBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSEEEEEEEECTTSCEEEEEEEETTTTE
T ss_pred EECCCCCEEEEecC--cccccccccccccCCCCeEEEECCC-CCEEEeccCCCCcceEEEecccCCCCCEEEEEECCCCe
Confidence 66777776665542 2 567777765 33221 1456889999 999765555 45565
Q ss_pred EEEEEEcC-CCce-----eEeeccCCcc-eeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 198 IIRVFLVS-EATK-----SYSFRRGTYP-STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 198 ~i~vwd~~-~~~~-----~~~~~~~~~~-~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
|.+||.. +++. ...+. + +. ..+..++++++|+ ++++...++.|.+||.++.
T Consensus 200 -i~~~~~~~~g~~~~~~~~~~~~-~-~~~~~p~~i~~d~~G~---l~v~~~~~~~i~~~d~~~g 257 (314)
T 1pjx_A 200 -LWSYDIKGPAKIENKKVWGHIP-G-THEGGADGMDFDEDNN---LLVANWGSSHIEVFGPDGG 257 (314)
T ss_dssp -EEEEEEEETTEEEEEEEEEECC-C-CSSCEEEEEEEBTTCC---EEEEEETTTEEEEECTTCB
T ss_pred -EEEEECCCCCccccceEEEECC-C-CCCCCCCceEECCCCC---EEEEEcCCCEEEEEcCCCC
Confidence 6899986 4542 22221 1 11 3478899999998 8888878899999997643
No 214
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.10 E-value=4.5e-07 Score=79.35 Aligned_cols=190 Identities=11% Similarity=0.040 Sum_probs=121.0
Q ss_pred EccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEEcCCe-EEEEECCeEEEEECCCCeeeeeecCC
Q 019672 54 MLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR-LVIVLREKTYIYDANTLAILDTIDTV 132 (337)
Q Consensus 54 ~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~d~~i~i~d~~~~~~~~~~~~~ 132 (337)
+....+.+.++.. ..++|..||..+++. ..+.....+.++.+++++ ++++.++.|.+||..+++........
T Consensus 20 w~~~~~~l~~~d~------~~~~i~~~d~~~~~~-~~~~~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~~~~~~~~~ 92 (297)
T 3g4e_A 20 WEEVSNSLLFVDI------PAKKVCRWDSFTKQV-QRVTMDAPVSSVALRQSGGYVATIGTKFCALNWKEQSAVVLATVD 92 (297)
T ss_dssp EETTTTEEEEEET------TTTEEEEEETTTCCE-EEEECSSCEEEEEEBTTSSEEEEETTEEEEEETTTTEEEEEEECC
T ss_pred EECCCCEEEEEEC------CCCEEEEEECCCCcE-EEEeCCCceEEEEECCCCCEEEEECCeEEEEECCCCcEEEEEecC
Confidence 3344455666654 478999999988765 456667789999998754 66666889999999877643322211
Q ss_pred C--CCceEEEEeeCCCccEEEEcCC---------CCccEEEEEEccCCccc--c--cCceEEEEeCCCCCEEEE-EeCCC
Q 019672 133 P--NLKGLCAFSPSLNACFLAVPAS---------TTKGSVLVYNVMELHSH--C--EAPLAAIVLSSNGMYIAT-ASEQG 196 (337)
Q Consensus 133 ~--~~~~~~~~~~~~~~~~la~~~~---------~~dg~v~i~d~~~~~~~--~--~~~i~~~~~s~dg~~lat-~s~dg 196 (337)
. .......+..++++.+.++... ...+.|..+|.. ++.. . ....+.++|+|||+.|.. .+.++
T Consensus 93 ~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~-g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~ 171 (297)
T 3g4e_A 93 NDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPD-HHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSY 171 (297)
T ss_dssp TTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTT-SCEEEEEEEESBEEEEEECTTSCEEEEEEGGGT
T ss_pred CCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECC-CCEEEEeeccccccceEEcCCCCEEEEecCCCC
Confidence 1 1233556777788876664311 012345445543 2211 1 155789999999997654 44556
Q ss_pred cEEEEEEc--CCCcee--Eeec-cCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 197 TIIRVFLV--SEATKS--YSFR-RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 197 ~~i~vwd~--~~~~~~--~~~~-~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
. |.+||+ .+|... ..+. ..........++++++|+ +.++....+.|.+||.++++
T Consensus 172 ~-i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~---lwva~~~~~~v~~~d~~tG~ 231 (297)
T 3g4e_A 172 S-VDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGK---LWVACYNGGRVIRLDPVTGK 231 (297)
T ss_dssp E-EEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSC---EEEEEETTTEEEEECTTTCC
T ss_pred c-EEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCC---EEEEEcCCCEEEEEcCCCce
Confidence 5 688987 566432 1111 111123578899999998 88888888899999987544
No 215
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.09 E-value=3.4e-08 Score=97.04 Aligned_cols=238 Identities=10% Similarity=0.050 Sum_probs=141.8
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-C-----ceEEEeCCCCcEEEEEeeCCE--EEEEEccCCCEEEEEeCCCCC------CC
Q 019672 7 SYPVFFVSFNQDNSGFALSTK-D-----GFKIFDSSTGRLCYERAVGAF--SIVEMLYSSSLLAIVGAGEQP------SL 72 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~-~-----g~~vw~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~------~~ 72 (337)
...|..++|||||++||-+.+ . .+++||+++++.+... ...+ ..+.+. +++.+++++..... ..
T Consensus 128 ~~~l~~~~~SpDg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~-~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~ 205 (693)
T 3iuj_A 128 TTALDQLSFSRDGRILAYSLSLAGSDWREIHLMDVESKQPLETP-LKDVKFSGISWL-GNEGFFYSSYDKPDGSELSART 205 (693)
T ss_dssp CCEEEEEEECTTSSEEEEEEECSSCCEEEEEEEETTTCSEEEEE-EEEEESCCCEEE-TTTEEEEEESSCCC-------C
T ss_pred cEEEEEEEECCCCCEEEEEEecCCCceEEEEEEECCCCCCCccc-cCCceeccEEEe-CCCEEEEEEecCcccccccccC
Confidence 346888999999999885432 1 2589999999865432 1122 334677 88888887753110 01
Q ss_pred CCceEEEEECCCCCE--EEEEEc----CCceeEEEEcCCe--EEEEE-----CCeEEEEECCCCe-eeeeecCCCCCceE
Q 019672 73 SPRRLCLFNTTTGTA--LRELNF----LTSILAVRLNKKR--LVIVL-----REKTYIYDANTLA-ILDTIDTVPNLKGL 138 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~--~~~~~~----~~~v~~i~~~~~~--~~v~~-----d~~i~i~d~~~~~-~~~~~~~~~~~~~~ 138 (337)
....|.+|++.++.. ..-+.. ...+..+.+++++ +++.. .+.|+++|+.++. ....+..+... ..
T Consensus 206 ~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~-~~ 284 (693)
T 3iuj_A 206 DQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDA-DV 284 (693)
T ss_dssp CCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSS-CE
T ss_pred CCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCc-eE
Confidence 235799999987652 222222 2236778888765 33332 2489999997663 23344333222 12
Q ss_pred EEEeeCCCccEEEEcCCC-CccEEEEEEccCCcc-----c--ccCceEEEEeCCCCCEEEEEeCCC-c-EEEEEEcCCCc
Q 019672 139 CAFSPSLNACFLAVPAST-TKGSVLVYNVMELHS-----H--CEAPLAAIVLSSNGMYIATASEQG-T-IIRVFLVSEAT 208 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~-~dg~v~i~d~~~~~~-----~--~~~~i~~~~~s~dg~~lat~s~dg-~-~i~vwd~~~~~ 208 (337)
..++++++ .+++....+ ..+.|..+|+.++.. + +...+. .|+++|+.|+....++ . .|++||+..+
T Consensus 285 ~~~~~~g~-~l~~~t~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g~- 360 (693)
T 3iuj_A 285 SLVDNKGS-TLYLLTNRDAPNRRLVTVDAANPGPAHWRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEGK- 360 (693)
T ss_dssp EEEEEETT-EEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTSC-
T ss_pred EEEeccCC-EEEEEECCCCCCCEEEEEeCCCCCccccEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCCC-
Confidence 22444333 333333321 147899999987543 1 113333 8999999888776544 1 3678998754
Q ss_pred eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCC----CcEEEEecCCCc
Q 019672 209 KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS----GSLHVFSPGFAI 255 (337)
Q Consensus 209 ~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d----g~v~iw~l~~~~ 255 (337)
....+... ....+..+.++|+++ .|+....+ ++|..||+.+++
T Consensus 361 ~~~~l~~p-~~~~~~~~~~~~d~~---~l~~~~ss~~tP~~l~~~d~~~g~ 407 (693)
T 3iuj_A 361 RVREVALP-GLGSVSGFNGKHDDP---ALYFGFENYAQPPTLYRFEPKSGA 407 (693)
T ss_dssp EEEEECCS-SSSEEEECCCCTTCS---CEEEEEECSSSCCEEEEECTTTCC
T ss_pred eeEEeecC-CCceEEeeecCCCCC---EEEEEecCCCCCCEEEEEECCCCe
Confidence 44444322 234577888899988 55555444 789999987653
No 216
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=99.09 E-value=2e-08 Score=92.41 Aligned_cols=267 Identities=11% Similarity=0.037 Sum_probs=163.2
Q ss_pred CCCCEEEEEcC------CceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCC---CCCCCceEEEEECCCCCE
Q 019672 17 QDNSGFALSTK------DGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQ---PSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 17 ~dg~~la~g~~------~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~---~~~~d~~v~iwd~~~~~~ 87 (337)
+++..+.+... +.+.++|+.+++.+.....+....+.+.++...+.+...... .+-.++.|.++|..+++.
T Consensus 82 ~~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~Pgia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~v 161 (426)
T 3c75_H 82 PDARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLPHPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLP 161 (426)
T ss_dssp CCTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCE
T ss_pred CCCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCCceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcE
Confidence 57777665544 357999999999887765433336677777776655531000 000257899999999999
Q ss_pred EEEEEcC--------CceeEEEEcCC--eEEEEE---CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcC
Q 019672 88 LRELNFL--------TSILAVRLNKK--RLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPA 154 (337)
Q Consensus 88 ~~~~~~~--------~~v~~i~~~~~--~~~v~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~ 154 (337)
+.++... .....+.++++ +++++. ++.|.+.|+.+++.+.++.... ...+.+.+...+++.++
T Consensus 162 v~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g----~~~~~p~g~~~~v~~~~ 237 (426)
T 3c75_H 162 IADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPD----CYHIFPASPTVFYMNCR 237 (426)
T ss_dssp EEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----EEEEEEEETTEEEEEET
T ss_pred EEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCC----ceeeccCCCcEEEEEcC
Confidence 9988764 23345677664 566665 4689999999999998887532 12334433334444443
Q ss_pred CCCccEEEEEEccCCcccc---------cCce-EEEEeCCCCCEEEEEeCCCcEEEEEEcCCCcee--Eeecc-------
Q 019672 155 STTKGSVLVYNVMELHSHC---------EAPL-AAIVLSSNGMYIATASEQGTIIRVFLVSEATKS--YSFRR------- 215 (337)
Q Consensus 155 ~~~dg~v~i~d~~~~~~~~---------~~~i-~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~--~~~~~------- 215 (337)
||.+.+.++.+++... ..++ ..+.|+++|..++..+..|+ +.+.|+..+... ..+..
T Consensus 238 ---dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~-V~ViD~~~~~~~v~~~~~~~~~~~i~ 313 (426)
T 3c75_H 238 ---DGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGK-IFQADLTAEGATFRAPIEALTEAERA 313 (426)
T ss_dssp ---TSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSE-EEEEEECSSCEEECCCEESSCTTTGG
T ss_pred ---CCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCc-EEEEeccCCceEEeeeeeeccccccc
Confidence 6777777774443220 1221 24568999998888888886 589998755421 11110
Q ss_pred -CCcceeEEEEEeecCCCcccEEEEEeC----------CCcEEEEecCCCcccCCCCcccccccccccccceeecccccc
Q 019672 216 -GTYPSTIFSLSFGQSMQFQDILVATSS----------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADH 284 (337)
Q Consensus 216 -~~~~~~i~~l~fs~dg~~~~~las~s~----------dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~ 284 (337)
+..+.....++|+||++ .|.++.. .++|.++|+.+.+...+. .++. .-|.
T Consensus 314 ~g~~p~g~~~va~s~dg~---rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I---------~vg~---~P~g---- 374 (426)
T 3c75_H 314 DDWRPGGWQQTAYHRQSD---RIYLLVDQRDEWKHKAASRFVVVLNAETGERINKI---------ELGH---EIDS---- 374 (426)
T ss_dssp GTEEECSSSCEEEEGGGT---EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE---------EEEE---EECE----
T ss_pred cccccCCceeeEEcCCCC---EEEEEecccccccccCCCCEEEEEECCCCeEEEEE---------ECCC---CcCe----
Confidence 00011122368999988 6666532 357999998876543210 0011 1122
Q ss_pred eeeeeccCCCcccC-EEEEEE-eCCcEEEEEEec
Q 019672 285 HVLRNAFPAGVKRA-SVSVIT-YNGYFVEYIFSI 316 (337)
Q Consensus 285 ~~~~~~~~~~~~~~-~l~~~~-~dg~~~~~~~~~ 316 (337)
+.+.++++ ++++.. .+|.|.++++.+
T Consensus 375 ------ia~spDg~~~lyv~n~~s~~VsVID~~t 402 (426)
T 3c75_H 375 ------INVSQDAEPLLYALSAGTQTLHIYDAAT 402 (426)
T ss_dssp ------EEECCSSSCEEEEEETTTTEEEEEETTT
T ss_pred ------EEEccCCCEEEEEEcCCCCeEEEEECCC
Confidence 22356667 888888 589999987643
No 217
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=99.08 E-value=3.3e-07 Score=81.47 Aligned_cols=212 Identities=11% Similarity=0.014 Sum_probs=129.2
Q ss_pred eEEEEEcCCCCE-EEEEcC-CceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE
Q 019672 10 VFFVSFNQDNSG-FALSTK-DGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 10 v~~~~fs~dg~~-la~g~~-~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~ 87 (337)
..+..|+|++.. +.++.. +++.+||.++++.........+..+.+..+.++++ +. .+.|.+||.++++.
T Consensus 51 ~egp~~~~~~~~l~~~d~~~~~i~~~d~~~~~~~~~~~~~~v~~i~~~~dg~l~v--~~-------~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 51 GEGPTFDPASGTAWWFNILERELHELHLASGRKTVHALPFMGSALAKISDSKQLI--AS-------DDGLFLRDTATGVL 121 (326)
T ss_dssp EEEEEEETTTTEEEEEEGGGTEEEEEETTTTEEEEEECSSCEEEEEEEETTEEEE--EE-------TTEEEEEETTTCCE
T ss_pred CcCCeEeCCCCEEEEEECCCCEEEEEECCCCcEEEEECCCcceEEEEeCCCeEEE--EE-------CCCEEEEECCCCcE
Confidence 467899998654 556654 45789999887653222223444455555544333 32 23599999988875
Q ss_pred EEEEEcC-----CceeEEEEcCCe-EEEEEC--------CeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEc
Q 019672 88 LRELNFL-----TSILAVRLNKKR-LVIVLR--------EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 88 ~~~~~~~-----~~v~~i~~~~~~-~~v~~d--------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~ 153 (337)
....... ..+.++.+++++ ++++.. +.|..++ +++...... . ......+.+++++..++++
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~--~~~~~~i~~s~dg~~lyv~ 196 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-D--ISIPNSICFSPDGTTGYFV 196 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-E--ESSEEEEEECTTSCEEEEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-C--CcccCCeEEcCCCCEEEEE
Confidence 4332221 247788898765 444431 3566666 454332211 1 1123455667777666555
Q ss_pred CCCCccEEEEEEcc--CC-cc-----cc-----cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcce
Q 019672 154 ASTTKGSVLVYNVM--EL-HS-----HC-----EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPS 220 (337)
Q Consensus 154 ~~~~dg~v~i~d~~--~~-~~-----~~-----~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~ 220 (337)
.. .++.|.+||+. ++ .. .. ......++++++|++.++...++. |.+||. +++.+..+... ..
T Consensus 197 ~~-~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~-v~~~d~-~g~~~~~i~~~--~~ 271 (326)
T 2ghs_A 197 DT-KVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGA-VDRYDT-DGNHIARYEVP--GK 271 (326)
T ss_dssp ET-TTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTE-EEEECT-TCCEEEEEECS--CS
T ss_pred EC-CCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCE-EEEECC-CCCEEEEEECC--CC
Confidence 43 36889999985 44 21 11 144678999999998877766666 578998 67776666432 23
Q ss_pred eEEEEEee-cCCCcccEEEEEeCC
Q 019672 221 TIFSLSFG-QSMQFQDILVATSSS 243 (337)
Q Consensus 221 ~i~~l~fs-~dg~~~~~las~s~d 243 (337)
.+.+++|+ |++. .|..++..
T Consensus 272 ~~~~~af~g~d~~---~L~vt~~~ 292 (326)
T 2ghs_A 272 QTTCPAFIGPDAS---RLLVTSAR 292 (326)
T ss_dssp BEEEEEEESTTSC---EEEEEEBC
T ss_pred CcEEEEEecCCCC---EEEEEecC
Confidence 58999999 8887 66555443
No 218
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=99.07 E-value=3.2e-08 Score=89.55 Aligned_cols=269 Identities=10% Similarity=0.028 Sum_probs=160.6
Q ss_pred EEEEcCCCCEEEEEcC------CceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCC-C--CCCCCceEEEEEC
Q 019672 12 FVSFNQDNSGFALSTK------DGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGE-Q--PSLSPRRLCLFNT 82 (337)
Q Consensus 12 ~~~fs~dg~~la~g~~------~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~-~--~~~~d~~v~iwd~ 82 (337)
.....||++.+.+... +.+.++|..+++.+.....+....+.+.++...+....... . .+..++.|.+||.
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P~va~spDG~~lyVan~~~~r~~~G~~~~~VsviD~ 116 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDP 116 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECT
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCCcEEECCCCCEEEEEcccccccccCCCCCEEEEEEC
Confidence 3456799998877754 34789999999988776543333478888887765553100 0 0002578999999
Q ss_pred CCCCEEEEEEcCC--------ceeEEEEcCC--eEEEEE---CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccE
Q 019672 83 TTGTALRELNFLT--------SILAVRLNKK--RLVIVL---REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 83 ~~~~~~~~~~~~~--------~v~~i~~~~~--~~~v~~---d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
.+++.+.++.... ....+.++++ .++++. ++.|.++|+.+++.+.++..+. . ..+.+.+...+
T Consensus 117 ~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g-~---~~~~P~g~~~~ 192 (386)
T 3sjl_D 117 VTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD-C---YHIFPTAPDTF 192 (386)
T ss_dssp TTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS-E---EEEEEEETTEE
T ss_pred CCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC-c---ceeecCCCcee
Confidence 9999999887542 3455777664 566664 4789999999999999986532 1 12223222233
Q ss_pred EEEcCCCCccEEEEEEccC-Ccccc---------cCceE-EEEe-CCCCCEEEEEeCCCcEEEEEEcCCCc--eeEeec-
Q 019672 150 LAVPASTTKGSVLVYNVME-LHSHC---------EAPLA-AIVL-SSNGMYIATASEQGTIIRVFLVSEAT--KSYSFR- 214 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~-~~~~~---------~~~i~-~~~~-s~dg~~lat~s~dg~~i~vwd~~~~~--~~~~~~- 214 (337)
++.+. ||.+.+.++.+ ++... +.++. ..+| .++|+++. .+.+|+ +.+.|+.++. .+..+.
T Consensus 193 ~~~~~---DG~~~~v~~~~~g~v~~~~~~~~~~~~~~~~~~~~~~~~dG~~~~-vs~~g~-V~v~d~~~~~~~v~~~~~~ 267 (386)
T 3sjl_D 193 FMHCR---DGSLAKVAFGTEGTPEITHTEVFHPEDEFLINHPAYSQKAGRLVW-PTYTGK-IHQIDLSSGDAKFLPAVEA 267 (386)
T ss_dssp EEEET---TSCEEEEECCSSSCCEEEECCCCSCTTSCBCSCCEEETTTTEEEE-EBTTSE-EEEEECTTSSCEECCCEES
T ss_pred EEECC---CCCEEEEECCCCCeEEEeecceeccccccccccceeEcCCCcEEE-EeCCCE-EEEEECCCCcceeecceec
Confidence 33332 66666666654 33211 12221 2355 46886544 566787 5899997654 232221
Q ss_pred -------cCCcceeEEEEEeecCCCcccEEEEEeC----------CCcEEEEecCCCcccCCCCccccccccccccccee
Q 019672 215 -------RGTYPSTIFSLSFGQSMQFQDILVATSS----------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNE 277 (337)
Q Consensus 215 -------~~~~~~~i~~l~fs~dg~~~~~las~s~----------dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (337)
.+..+..+..++++|+++ .|..... .++|-++|+++.+..++. .++ ..
T Consensus 268 ~~~~~~~~g~~p~g~q~~a~~~~~~---~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i---------~vg---~~ 332 (386)
T 3sjl_D 268 LTEAERADGWRPGGWQQVAYHRALD---RIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKF---------EMG---HE 332 (386)
T ss_dssp SCHHHHHTTEEECSSSCEEEETTTT---EEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEE---------EEE---EE
T ss_pred cccccccccccCCCcceeeECCCCC---eEEEEeccccccccCCCCCEEEEEECCCCeEEEEE---------ECC---CC
Confidence 111122233478899998 6666543 246888898776543210 001 11
Q ss_pred ecccccceeeeeccCCCcccC-EEEEEEe-CCcEEEEEE
Q 019672 278 VLDPADHHVLRNAFPAGVKRA-SVSVITY-NGYFVEYIF 314 (337)
Q Consensus 278 ~w~~~~~~~~~~~~~~~~~~~-~l~~~~~-dg~~~~~~~ 314 (337)
.|+. ...++++ +|++.+. +|.+.+++.
T Consensus 333 ~~~l----------avs~D~~~~ly~tn~~~~~VsViD~ 361 (386)
T 3sjl_D 333 IDSI----------NVSQDEKPLLYALSTGDKTLYIHDA 361 (386)
T ss_dssp ECEE----------EECSSSSCEEEEEETTTTEEEEEET
T ss_pred cceE----------EECCCCCeEEEEEcCCCCeEEEEEC
Confidence 2333 2255554 6777665 888887754
No 219
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.07 E-value=7.5e-07 Score=81.53 Aligned_cols=219 Identities=9% Similarity=0.100 Sum_probs=131.9
Q ss_pred CceEEEeCCC-----CcEEEEEee-------CCEEEEEE--------c--cCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 28 DGFKIFDSST-----GRLCYERAV-------GAFSIVEM--------L--YSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 28 ~g~~vw~~~~-----~~~~~~~~~-------~~~~~~~~--------~--~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
+.+.+-|+++ ++.+..... |+.+.-++ . .+.+.+.+.+. .+++|.+.|+.+.
T Consensus 43 d~la~vDvdp~s~ty~~vi~~~~~p~~gde~HH~gwn~css~~~~~~~~~~~r~~l~v~~l------~s~~I~viD~~t~ 116 (462)
T 2ece_A 43 DFIAVVDVNPKSETYSKIVHKVELPYINDELHHFGWNACSSALCPNGKPNIERRFLIVPGL------RSSRIYIIDTKPN 116 (462)
T ss_dssp CEEEEEECCTTSTTTTSEEEEEECSSSCCCBCCCEESCCGGGGSTTCCTTCCSCEEEEEBT------TTCCEEEEECCSC
T ss_pred CeEEEEECCCCCCCcceEEEEEECCCCCCcccccchhhhhhhcccccCCCccCCEEEEccC------CCCeEEEEECCCC
Confidence 4567888887 677665432 22222111 2 22445544444 5889999999765
Q ss_pred ----CEEEEEE---c----C-CceeEEEEcCCeEEEEE--C------CeEEEEECCCCeeeeeecCCCCCce-EEEEeeC
Q 019672 86 ----TALRELN---F----L-TSILAVRLNKKRLVIVL--R------EKTYIYDANTLAILDTIDTVPNLKG-LCAFSPS 144 (337)
Q Consensus 86 ----~~~~~~~---~----~-~~v~~i~~~~~~~~v~~--d------~~i~i~d~~~~~~~~~~~~~~~~~~-~~~~~~~ 144 (337)
+.+..++ . . ..-..+.+.++++++.. + +.|.++|..+++.+.++.....+.. ...+-.+
T Consensus 117 p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~ 196 (462)
T 2ece_A 117 PREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWN 196 (462)
T ss_dssp TTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEE
T ss_pred CCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEEC
Confidence 5555552 1 1 13345667788876654 3 5899999999999988865433322 1224446
Q ss_pred CCccEEEEcCC-----------------CCccEEEEEEccCCccccc---C----ceEEEEe--CCCCCEEEEEeC----
Q 019672 145 LNACFLAVPAS-----------------TTKGSVLVYNVMELHSHCE---A----PLAAIVL--SSNGMYIATASE---- 194 (337)
Q Consensus 145 ~~~~~la~~~~-----------------~~dg~v~i~d~~~~~~~~~---~----~i~~~~~--s~dg~~lat~s~---- 194 (337)
|++..++++.- ....+|.+||+.+++...+ + ....+.| +|+|+++..+++
T Consensus 197 p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~ 276 (462)
T 2ece_A 197 LPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLK 276 (462)
T ss_dssp TTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETT
T ss_pred CCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeecc
Confidence 67777777630 0258899999998765433 1 2344545 999999888886
Q ss_pred -CCcEEEEEEcCCCce--eEee--cc----C--------C--cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 195 -QGTIIRVFLVSEATK--SYSF--RR----G--------T--YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 195 -dg~~i~vwd~~~~~~--~~~~--~~----~--------~--~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
....|-+|....|+. ++.+ .. + . .......|.+||||++ ++++.-..+.|.+||+...
T Consensus 277 ~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrf--LYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 277 DLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKF--LYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp TCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCE--EEEEETTTTEEEEEECSST
T ss_pred CCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCE--EEEEeCCCCEEEEEEecCC
Confidence 543355655544431 1111 00 0 0 0123567899999992 4444455689999999744
No 220
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.07 E-value=2.6e-07 Score=80.15 Aligned_cols=222 Identities=10% Similarity=0.036 Sum_probs=137.7
Q ss_pred CCCeEEEEEcCCCCEEEEEcC-CceEEEeCCCCcEE-EEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 7 SYPVFFVSFNQDNSGFALSTK-DGFKIFDSSTGRLC-YERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~-~g~~vw~~~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
...+.+++++++|..+++... +++.+||.. ++.. +... ......+.+..+.++. +... .++.|..+|.
T Consensus 61 ~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~~~~i~~~~~g~l~-v~~~------~~~~i~~~~~ 132 (300)
T 2qc5_A 61 DAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGFTEYPLPQPDSGPYGITEGLNGDIW-FTQL------NGDRIGKLTA 132 (300)
T ss_dssp TCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECSTTCEE-EEET------TTTEEEEECT
T ss_pred CCcceeEEECCCCCEEEEecCCCeEEEECCC-CCeEEecCCCCCCCCccceECCCCCEE-EEcc------CCCeEEEECC
Confidence 356889999999998777664 457899987 5543 2221 1233344444444433 3332 3678999998
Q ss_pred CCCCEEEEEEcC---CceeEEEEcCCe-EEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC
Q 019672 83 TTGTALRELNFL---TSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 83 ~~~~~~~~~~~~---~~v~~i~~~~~~-~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
. ++.. .+... ..+.++.+++++ +.++. ++.|..||. +++... +..........++..++++.+.++..
T Consensus 133 ~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~~-~~~~~~~~~~~~i~~d~~g~l~v~~~-- 206 (300)
T 2qc5_A 133 D-GTIY-EYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLEE-YPLPTNAAAPVGITSGNDGALWFVEI-- 206 (300)
T ss_dssp T-SCEE-EEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEEE-EECSSTTCCEEEEEECTTSSEEEEET--
T ss_pred C-CCEE-EccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEEE-eeCCCCCCCcceEEECCCCCEEEEcc--
Confidence 7 6544 33222 367888887644 55665 568999998 554432 32222223455667777776665544
Q ss_pred CccEEEEEEccCCcccc------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecC
Q 019672 157 TKGSVLVYNVMELHSHC------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS 230 (337)
Q Consensus 157 ~dg~v~i~d~~~~~~~~------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~d 230 (337)
..+.|.+||. ++.... ...+.+++++++|++.++...++. |..||. +++.. .+........+.+++++++
T Consensus 207 ~~~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~-i~~~~~-~g~~~-~~~~~~~~~~~~~i~~~~~ 282 (300)
T 2qc5_A 207 MGNKIGRITT-TGEISEYDIPTPNARPHAITAGKNSEIWFTEWGANQ-IGRITN-DNTIQ-EYQLQTENAEPHGITFGKD 282 (300)
T ss_dssp TTTEEEEECT-TCCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTE-EEEECT-TSCEE-EEECCSTTCCCCCEEECTT
T ss_pred CCCEEEEEcC-CCcEEEEECCCCCCCceEEEECCCCCEEEeccCCCe-EEEECC-CCcEE-EEECCccCCccceeEeCCC
Confidence 3678999998 333211 256889999999997776656666 578998 45432 3322212234788999999
Q ss_pred CCcccEEEEEeCCCcEEEEec
Q 019672 231 MQFQDILVATSSSGSLHVFSP 251 (337)
Q Consensus 231 g~~~~~las~s~dg~v~iw~l 251 (337)
|+ ++++.. . .|..++.
T Consensus 283 g~---l~v~~~-~-~i~~~~p 298 (300)
T 2qc5_A 283 GS---VWFALK-C-KIGKLNL 298 (300)
T ss_dssp SC---EEEECS-S-EEEEEEE
T ss_pred CC---EEEEcc-C-ceEEeCC
Confidence 98 555554 4 6766664
No 221
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=1e-08 Score=100.38 Aligned_cols=185 Identities=18% Similarity=0.099 Sum_probs=114.9
Q ss_pred CEEEEEcC-CceEEEeCCCCcEEEEEeeCCE-----------EEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE
Q 019672 20 SGFALSTK-DGFKIFDSSTGRLCYERAVGAF-----------SIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 20 ~~la~g~~-~g~~vw~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~ 87 (337)
..+.+++. +.+.-+|..+|+++...+.... ...........+ +++. .|+.|..+|.++|+.
T Consensus 78 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~a~~~~~v-~v~~------~dg~l~alD~~tG~~ 150 (677)
T 1kb0_A 78 GIMYVSASWSVVHAIDTRTGNRIWTYDPQIDRSTGFKGCCDVVNRGVALWKGKV-YVGA------WDGRLIALDAATGKE 150 (677)
T ss_dssp TEEEEECGGGCEEEEETTTTEEEEEECCCCCGGGGGGSSSCSCCCCCEEETTEE-EEEC------TTSEEEEEETTTCCE
T ss_pred CEEEEECCCCeEEEEECCCCcEEEEEcCCCCccccccccccCCCCCceEECCEE-EEEc------CCCEEEEEECCCCCE
Confidence 34555554 4478899999999877653210 000111123333 3443 489999999999999
Q ss_pred EEEEEcC------Ccee-EEEEcCCeEEEEE-------CCeEEEEECCCCeeeeeecCCCCCc-----------------
Q 019672 88 LRELNFL------TSIL-AVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLK----------------- 136 (337)
Q Consensus 88 ~~~~~~~------~~v~-~i~~~~~~~~v~~-------d~~i~i~d~~~~~~~~~~~~~~~~~----------------- 136 (337)
+-++... ..+. ...+..+.+++.. ++.|+.||..+++.+..+.......
T Consensus 151 ~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~ 230 (677)
T 1kb0_A 151 VWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAEYGVRGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWD 230 (677)
T ss_dssp EEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSC
T ss_pred EeeecCCcCcCcCcccccCcEEECCEEEEEecccccCCCCEEEEEECCCCcEEEEeccCCCCcccccccccccccccccc
Confidence 9888764 1221 1223456666654 4789999999999988775432210
Q ss_pred ----------eE---EEEeeCCCccEEEEcCCCCc-------------------cEEEEEEccCCccccc----------
Q 019672 137 ----------GL---CAFSPSLNACFLAVPASTTK-------------------GSVLVYNVMELHSHCE---------- 174 (337)
Q Consensus 137 ----------~~---~~~~~~~~~~~la~~~~~~d-------------------g~v~i~d~~~~~~~~~---------- 174 (337)
+. ..++.++++..++++.. + +.|..+|..+++..-.
T Consensus 231 ~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~--~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd 308 (677)
T 1kb0_A 231 PSGKWWEAGGGGTMWDSMTFDAELNTMYVGTG--NGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWD 308 (677)
T ss_dssp GGGCHHHHCEECCCCSCEEEETTTTEEEEECC--CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSC
T ss_pred ccCceeEeCCCcccccceeEcCCCCEEEEECC--CCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccc
Confidence 00 12334455556655542 2 2588999998876421
Q ss_pred ----CceEEEEeCCCC---CEEEEEeCCCcEEEEEEcCCCceeEeec
Q 019672 175 ----APLAAIVLSSNG---MYIATASEQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 175 ----~~i~~~~~s~dg---~~lat~s~dg~~i~vwd~~~~~~~~~~~ 214 (337)
.....+....+| ..++.++.+|. +.++|.++|+.+..+.
T Consensus 309 ~~~~~~p~l~~~~~dG~~~~~l~~~~~~G~-l~~lD~~tG~~l~~~~ 354 (677)
T 1kb0_A 309 YTSTQPMILADIKIAGKPRKVILHAPKNGF-FFVLDRTNGKFISAKN 354 (677)
T ss_dssp CCCCSCCEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEEE
T ss_pred cccCCCcEEEecccCCcEeeEEEEECCCCE-EEEEECCCCCEecccc
Confidence 112233344477 68899999997 6899999999987764
No 222
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=99.06 E-value=3.7e-08 Score=96.42 Aligned_cols=229 Identities=9% Similarity=0.087 Sum_probs=144.6
Q ss_pred CCCEEEEEcCCc-eEEEeCCCCcEEEEEeeC-C----EEEE-EEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEE
Q 019672 18 DNSGFALSTKDG-FKIFDSSTGRLCYERAVG-A----FSIV-EMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRE 90 (337)
Q Consensus 18 dg~~la~g~~~g-~~vw~~~~~~~~~~~~~~-~----~~~~-~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~ 90 (337)
++..+.+++.++ +..+|..+|+++...... . ..+. ......+.+++.+.+.. ...++.|..+|.++|+.+-+
T Consensus 127 ~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~~p~v~~~~v~v~~~~~~-~~~~g~v~a~D~~tG~~~W~ 205 (677)
T 1kb0_A 127 WKGKVYVGAWDGRLIALDAATGKEVWHQNTFEGQKGSLTITGAPRVFKGKVIIGNGGAE-YGVRGYITAYDAETGERKWR 205 (677)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEETTTTCCSSCBCCSCCEEETTEEEECCBCTT-TCCBCEEEEEETTTCCEEEE
T ss_pred ECCEEEEEcCCCEEEEEECCCCCEEeeecCCcCcCcCcccccCcEEECCEEEEEecccc-cCCCCEEEEEECCCCcEEEE
Confidence 355677776555 799999999998776543 1 0100 00001233333322100 01268999999999999987
Q ss_pred EEcCCce---------------------------------eEEEEcC--CeEEEEECC--------------------eE
Q 019672 91 LNFLTSI---------------------------------LAVRLNK--KRLVIVLRE--------------------KT 115 (337)
Q Consensus 91 ~~~~~~v---------------------------------~~i~~~~--~~~~v~~d~--------------------~i 115 (337)
+....+. ..+.+++ +.+++...+ .|
T Consensus 206 ~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv 285 (677)
T 1kb0_A 206 WFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASI 285 (677)
T ss_dssp EESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEE
T ss_pred eccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCccccCCCCCccCCCCeeeEEE
Confidence 7643211 1244543 445554422 49
Q ss_pred EEEECCCCeeeeeecCCCCC-------ceEEEEeeCCCc---cEEEEcCCCCccEEEEEEccCCccccc---Cc------
Q 019672 116 YIYDANTLAILDTIDTVPNL-------KGLCAFSPSLNA---CFLAVPASTTKGSVLVYNVMELHSHCE---AP------ 176 (337)
Q Consensus 116 ~i~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~la~~~~~~dg~v~i~d~~~~~~~~~---~~------ 176 (337)
..+|..+++.+..++...+. .....+....++ ..++.++ .+|.|.++|..+++.+.. .+
T Consensus 286 ~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~dG~~~~~l~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~~~~~ 363 (677)
T 1kb0_A 286 VALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIAGKPRKVILHAP--KNGFFFVLDRTNGKFISAKNFVPVNWASG 363 (677)
T ss_dssp EEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEE
T ss_pred EEEECCCCCEEEEEecCCCcccccccCCCcEEEecccCCcEeeEEEEEC--CCCEEEEEECCCCCEeccccccccCcccc
Confidence 99999999988877653321 111111211233 4566666 489999999999876532 11
Q ss_pred -------e------------------------EEEEeCCCCCEEEEEeCC------------------------------
Q 019672 177 -------L------------------------AAIVLSSNGMYIATASEQ------------------------------ 195 (337)
Q Consensus 177 -------i------------------------~~~~~s~dg~~lat~s~d------------------------------ 195 (337)
+ ..++|+|++.++.+.+.+
T Consensus 364 ~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g 443 (677)
T 1kb0_A 364 YDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQTGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTA 443 (677)
T ss_dssp ECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETTTTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCC
T ss_pred cCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCCCCEEEEeChhcceeeecccccccccccccccccccccccc
Confidence 1 156889998888776542
Q ss_pred -------------CcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 196 -------------GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 196 -------------g~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
|. |..||+.+|+.+.++..+. ++....++.++. .++.++.||.+++||+++++.
T Consensus 444 ~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~~---~~~~g~~~~~g~---~v~~g~~dg~l~a~D~~tG~~ 510 (677)
T 1kb0_A 444 KFFNAEPPKSKPFGR-LLAWDPVAQKAAWSVEHVS---PWNGGTLTTAGN---VVFQGTADGRLVAYHAATGEK 510 (677)
T ss_dssp EEECSSCCCSCCEEE-EEEEETTTTEEEEEEEESS---SCCCCEEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred cccccccCCCCCccE-EEEEeCCCCcEEeecCCCC---CCcCcceEeCCC---EEEEECCCCcEEEEECCCCce
Confidence 55 6799999999988775432 234455677787 899999999999999988765
No 223
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.05 E-value=7.1e-08 Score=84.82 Aligned_cols=217 Identities=10% Similarity=-0.006 Sum_probs=129.6
Q ss_pred CeEEEEEcCCCCE-EEEEcCC-ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 9 PVFFVSFNQDNSG-FALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 9 ~v~~~~fs~dg~~-la~g~~~-g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
-.....|+|+|+. +.++..+ ++..|+.......+.........+.+..+.+++ ++.. .++.|.+||.. ++
T Consensus 46 ~~egp~~~~~g~~l~~~d~~~~~i~~~~~~g~~~~~~~~~~~~~gl~~d~dG~l~-v~~~------~~~~v~~~~~~-g~ 117 (305)
T 3dr2_A 46 WSEGPAWWEAQRTLVWSDLVGRRVLGWREDGTVDVLLDATAFTNGNAVDAQQRLV-HCEH------GRRAITRSDAD-GQ 117 (305)
T ss_dssp SEEEEEEEGGGTEEEEEETTTTEEEEEETTSCEEEEEESCSCEEEEEECTTSCEE-EEET------TTTEEEEECTT-SC
T ss_pred CccCCeEeCCCCEEEEEECCCCEEEEEeCCCCEEEEeCCCCccceeeECCCCCEE-EEEC------CCCEEEEECCC-CC
Confidence 3567899999994 5566554 478888743322333323334445555555543 3332 25789999986 55
Q ss_pred EEEEEE-cC----CceeEEEEcCCeEEEEEC--------------------CeEEEEECCCCeeeeeecCCCCCceEEEE
Q 019672 87 ALRELN-FL----TSILAVRLNKKRLVIVLR--------------------EKTYIYDANTLAILDTIDTVPNLKGLCAF 141 (337)
Q Consensus 87 ~~~~~~-~~----~~v~~i~~~~~~~~v~~d--------------------~~i~i~d~~~~~~~~~~~~~~~~~~~~~~ 141 (337)
...... .. ..+.++.+++++.+..+| +.|+.||..+++..... ... ....+
T Consensus 118 ~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~---~p~gl 193 (305)
T 3dr2_A 118 AHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLD---HPNGL 193 (305)
T ss_dssp EEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EES---SEEEE
T ss_pred EEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCC---CCcce
Confidence 332211 11 235678888776555532 45777777655443222 111 22345
Q ss_pred eeCCCccEEEEcCCCC----ccEEEEEEccCCccc-----c---cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCce
Q 019672 142 SPSLNACFLAVPASTT----KGSVLVYNVMELHSH-----C---EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK 209 (337)
Q Consensus 142 ~~~~~~~~la~~~~~~----dg~v~i~d~~~~~~~-----~---~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~ 209 (337)
+++|++..|+++.... .+.|.+||+...... . ......++++++|++.++ +.+| |.+||. +++.
T Consensus 194 ~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~d~~G~lwv~-~~~g--v~~~~~-~g~~ 269 (305)
T 3dr2_A 194 AFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCVDRGGWLWSS-SGTG--VCVFDS-DGQL 269 (305)
T ss_dssp EECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEECTTSCEEEC-CSSE--EEEECT-TSCE
T ss_pred EEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEECCCCCEEEe-cCCc--EEEECC-CCCE
Confidence 6677777666654311 268999998754311 0 133567899999995554 4554 579998 5777
Q ss_pred eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEE
Q 019672 210 SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLH 247 (337)
Q Consensus 210 ~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~ 247 (337)
+..+.... .+.+++|+|+++ .|..++.++..+
T Consensus 270 ~~~~~~~~---~~~~~~f~~d~~---~L~it~~~~l~~ 301 (305)
T 3dr2_A 270 LGHIPTPG---TASNCTFDQAQQ---RLFITGGPCLWM 301 (305)
T ss_dssp EEEEECSS---CCCEEEECTTSC---EEEEEETTEEEE
T ss_pred EEEEECCC---ceeEEEEeCCCC---EEEEEcCCeEEE
Confidence 77665332 477899999998 788887765333
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=99.05 E-value=1.6e-07 Score=80.67 Aligned_cols=171 Identities=13% Similarity=0.048 Sum_probs=125.4
Q ss_pred CceEEEEECCCCCEEEEEEcCC--ceeEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccE
Q 019672 74 PRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 149 (337)
+++|++.|+.+++.+.++.... ....+.+.++.++++. ++.+.++|..+++.+.++... .+.+ ..+++++ ..
T Consensus 43 ~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~~~g-~glt~Dg--~~ 118 (266)
T 2iwa_A 43 RSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDG-WGLATDG--KI 118 (266)
T ss_dssp TCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSEEEEEETTTTEEEEEEECC-SSSC-CEEEECS--SS
T ss_pred CCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCEEEEEECCCCcEEEEEECC-CCCe-EEEEECC--CE
Confidence 6899999999999999887654 3346778888999988 889999999999999998754 2223 3466654 33
Q ss_pred EEEcCCCCccEEEEEEccCCccccc----------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-C-
Q 019672 150 LAVPASTTKGSVLVYNVMELHSHCE----------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-T- 217 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~~~----------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-~- 217 (337)
++++. .++.|.++|..+.+.... ..++.+.|. +|+..+....++. |.+.|..+++.+..+..+ .
T Consensus 119 l~vs~--gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~-V~vID~~tg~V~~~I~~~g~~ 194 (266)
T 2iwa_A 119 LYGSD--GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDC-IARISAKDGTLLGWILLPNLR 194 (266)
T ss_dssp EEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE-EEEEETTTCCEEEEEECHHHH
T ss_pred EEEEC--CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCe-EEEEECCCCcEEEEEECCCcc
Confidence 44443 368999999988775433 136788888 7765555445555 679999999998887532 1
Q ss_pred ---------cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 218 ---------YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 218 ---------~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
.....+.|+|+|+++ .+++++...+++.+.++...
T Consensus 195 ~~~~~~~~~~~~v~nGIa~~~~~~--~lfVTgk~~~~v~~i~l~~~ 238 (266)
T 2iwa_A 195 KKLIDEGFRDIDVLNGIAWDQENK--RIFVTGKLWPKLFEIKLHLV 238 (266)
T ss_dssp HHHHHTTCTTCCCEEEEEEETTTT--EEEEEETTCSEEEEEEEEEC
T ss_pred cccccccccccCceEEEEEcCCCC--EEEEECCCCCeEEEEEEecc
Confidence 012468999999987 36777777888999888654
No 225
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=99.03 E-value=4.3e-08 Score=83.44 Aligned_cols=169 Identities=7% Similarity=-0.046 Sum_probs=120.2
Q ss_pred ccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCce--eEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeec
Q 019672 55 LYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSI--LAVRLNKKRLVIVL--REKTYIYDANTLAILDTID 130 (337)
Q Consensus 55 ~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v--~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~ 130 (337)
.++.+.+..+++ .++.|+.+|+++++.+.++ .+... ..+.+.++.++++. ++.+.+||..+++.+.++.
T Consensus 61 ~~~~~~Ly~stG------~~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~ 133 (268)
T 3nok_A 61 VFHQGHFFESTG------HQGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTTR 133 (268)
T ss_dssp EEETTEEEEEET------TTTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEEE
T ss_pred EEECCEEEEEcC------CCCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEEe
Confidence 344555555555 4778999999999999888 66654 44888889999988 8899999999999999997
Q ss_pred CCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccccc----------CceEEEEeCCCCCEEEEEeCCCcEEE
Q 019672 131 TVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCE----------APLAAIVLSSNGMYIATASEQGTIIR 200 (337)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~----------~~i~~~~~s~dg~~lat~s~dg~~i~ 200 (337)
.....- +++++ +..|+.+. .++.|.++|..+.+...+ ..++.+.|. +|+..|..-.+.. |.
T Consensus 134 ~~~eGw---GLt~D--g~~L~vSd--Gs~~l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~-I~ 204 (268)
T 3nok_A 134 YSGEGW---GLCYW--NGKLVRSD--GGTMLTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSD-VL 204 (268)
T ss_dssp CSSCCC---CEEEE--TTEEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSE-EE
T ss_pred CCCcee---EEecC--CCEEEEEC--CCCEEEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCe-EE
Confidence 654433 33444 34555544 378999999998876543 345677776 7765555444554 67
Q ss_pred EEEcCCCceeEeeccC-----------CcceeEEEEEeecCCCcccEEEEEeC
Q 019672 201 VFLVSEATKSYSFRRG-----------TYPSTIFSLSFGQSMQFQDILVATSS 242 (337)
Q Consensus 201 vwd~~~~~~~~~~~~~-----------~~~~~i~~l~fs~dg~~~~~las~s~ 242 (337)
+.|.++|+.+..+... ......+.|||+|+++ .|.+++.
T Consensus 205 vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~---rlfVTGK 254 (268)
T 3nok_A 205 EIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSG---RIFMTGK 254 (268)
T ss_dssp EECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTC---CEEEEET
T ss_pred EEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCC---EEEEeCC
Confidence 9999999988776432 0113478999999887 4555443
No 226
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=99.02 E-value=1.7e-07 Score=79.72 Aligned_cols=164 Identities=9% Similarity=0.079 Sum_probs=117.5
Q ss_pred ceEEEEECCCCCEEEEEEcCCce--eEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEE
Q 019672 75 RRLCLFNTTTGTALRELNFLTSI--LAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFL 150 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~~v--~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 150 (337)
..|+.+|+++++.+.++...... ..+.+..+.++++. ++.+.+||..+++.+.++......- +++++ +..|
T Consensus 65 S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~eG~---glt~d--g~~L 139 (262)
T 3nol_A 65 SSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDGEGW---GLTHN--DQYL 139 (262)
T ss_dssp EEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTCCEEEEEECSSCCC---CEEEC--SSCE
T ss_pred ceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeCCEEEEEECccCcEEEEEECCCCce---EEecC--CCEE
Confidence 48999999999999999887655 44778889999988 8899999999999999997654433 33443 3455
Q ss_pred EEcCCCCccEEEEEEccCCccccc----------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCC---
Q 019672 151 AVPASTTKGSVLVYNVMELHSHCE----------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT--- 217 (337)
Q Consensus 151 a~~~~~~dg~v~i~d~~~~~~~~~----------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~--- 217 (337)
+.+. .++.|.++|..+.+...+ ..++.+.+. +|+..|..-.+.. |.+.|.++|+.+..+....
T Consensus 140 ~~Sd--Gs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~-I~vIDp~tG~V~~~Id~~~L~~ 215 (262)
T 3nol_A 140 IMSD--GTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNK-IVRIDPETGKVTGIIDLNGILA 215 (262)
T ss_dssp EECC--SSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSE-EEEECTTTCBEEEEEECTTGGG
T ss_pred EEEC--CCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCe-EEEEECCCCcEEEEEECCcCcc
Confidence 5544 267899999998775533 334567776 7765555445555 6899999999887765321
Q ss_pred -------cceeEEEEEeecCCCcccEEEEEeCCCcEEEEec
Q 019672 218 -------YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSP 251 (337)
Q Consensus 218 -------~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l 251 (337)
.....+.|||+|+++ .|.+++.. -=++|.+
T Consensus 216 ~~~~~~~~~~vlNGIA~dp~~~---~lfVTGK~-Wp~~~ev 252 (262)
T 3nol_A 216 EAGPLPSPIDVLNGIAWDKEHH---RLFVTGKL-WPKVFEI 252 (262)
T ss_dssp GSCSCCSSCCCEEEEEEETTTT---EEEEEETT-CSEEEEE
T ss_pred ccccccCcCCceEEEEEcCCCC---EEEEECCC-CCceEEE
Confidence 112478999999988 67766654 2234443
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=99.01 E-value=1.4e-07 Score=86.27 Aligned_cols=221 Identities=9% Similarity=0.014 Sum_probs=133.4
Q ss_pred c--CCCCEEEEEcCC--ceEEEeCCCC----cEEEEEe------eCCE---EEEEEccCCCEEEEEeCCCCCCCCCceEE
Q 019672 16 N--QDNSGFALSTKD--GFKIFDSSTG----RLCYERA------VGAF---SIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (337)
Q Consensus 16 s--~dg~~la~g~~~--g~~vw~~~~~----~~~~~~~------~~~~---~~~~~~~~~~~~~~~~~g~~~~~~d~~v~ 78 (337)
+ +++++|.+.+.. .+.|+|+.+. ++....+ ..+. -.+.+.++. .++...++. .....+.|.
T Consensus 90 ~~~~~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~-~g~~~g~v~ 167 (462)
T 2ece_A 90 KPNIERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNE-EGEGPGGIL 167 (462)
T ss_dssp CTTCCSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEET-TSCSCCEEE
T ss_pred CCCccCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCc-CCCCCCeEE
Confidence 7 889998776643 4799998644 3333331 0111 123445555 433332321 112358999
Q ss_pred EEECCCCCEEEEEEcCC-c---eeEEEEcCCe--EEEEE--------------------CCeEEEEECCCCeeeeeecCC
Q 019672 79 LFNTTTGTALRELNFLT-S---ILAVRLNKKR--LVIVL--------------------REKTYIYDANTLAILDTIDTV 132 (337)
Q Consensus 79 iwd~~~~~~~~~~~~~~-~---v~~i~~~~~~--~~v~~--------------------d~~i~i~d~~~~~~~~~~~~~ 132 (337)
+.|.++++.+.++.... + -.++.+++++ ++++. .++|.+||+.+++.+.++...
T Consensus 168 vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg 247 (462)
T 2ece_A 168 MLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLG 247 (462)
T ss_dssp EECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESC
T ss_pred EEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecC
Confidence 99999999999886432 1 2446666543 33332 479999999999888888764
Q ss_pred CCCceE--EEEeeCCCccEEEEcCC----CCccEEEEEEc-------------cCCcccc------------cCceEEEE
Q 019672 133 PNLKGL--CAFSPSLNACFLAVPAS----TTKGSVLVYNV-------------MELHSHC------------EAPLAAIV 181 (337)
Q Consensus 133 ~~~~~~--~~~~~~~~~~~la~~~~----~~dg~v~i~d~-------------~~~~~~~------------~~~i~~~~ 181 (337)
.....- +.+.++|++.+..+... +.+++|.+|.. .+..... ......|.
T Consensus 248 ~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~ 327 (462)
T 2ece_A 248 EENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDID 327 (462)
T ss_dssp TTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEE
T ss_pred CCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEE
Confidence 221222 34555787766554431 02567765433 2211100 13468899
Q ss_pred eCCCCCEEEEEeCCCcEEEEEEcCC---CceeEeeccCCc---------c---eeEEEEEeecCCCcccEEEEEe
Q 019672 182 LSSNGMYIATASEQGTIIRVFLVSE---ATKSYSFRRGTY---------P---STIFSLSFGQSMQFQDILVATS 241 (337)
Q Consensus 182 ~s~dg~~lat~s~dg~~i~vwd~~~---~~~~~~~~~~~~---------~---~~i~~l~fs~dg~~~~~las~s 241 (337)
+||||++|..+......|.++|+.+ .+.+..+..+.. . ..-..+++||||+ +|.++.
T Consensus 328 lS~DGrfLYVSnrg~d~VavfdV~d~~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk---~LyVaN 399 (462)
T 2ece_A 328 ISLDDKFLYLSLWGIGEVRQYDISNPFKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGR---RVYVTN 399 (462)
T ss_dssp ECTTSCEEEEEETTTTEEEEEECSSTTSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSS---EEEEEC
T ss_pred ECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCC---EEEEEc
Confidence 9999999998887555589999863 345555543311 0 0135689999999 888887
No 228
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.99 E-value=4.2e-07 Score=76.64 Aligned_cols=180 Identities=12% Similarity=0.091 Sum_probs=123.3
Q ss_pred ccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCce--eEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeec
Q 019672 55 LYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSI--LAVRLNKKRLVIVL--REKTYIYDANTLAILDTID 130 (337)
Q Consensus 55 ~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v--~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~ 130 (337)
.++.+.+...+|. +....|+..|+++++.+.++..+... ..+.+..+.++++. ++.+.+||..+++.+.++.
T Consensus 27 ~~~~~~LyestG~----~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti~ 102 (243)
T 3mbr_X 27 FYLRGHLYESTGE----TGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARFR 102 (243)
T ss_dssp EEETTEEEEEECC----TTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEEE
T ss_pred EEECCEEEEECCC----CCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEEe
Confidence 3445555444442 12469999999999999999887654 45677889999988 8899999999999999997
Q ss_pred CCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccccc----------CceEEEEeCCCCCEEEEEeCCCcEEE
Q 019672 131 TVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCE----------APLAAIVLSSNGMYIATASEQGTIIR 200 (337)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~----------~~i~~~~~s~dg~~lat~s~dg~~i~ 200 (337)
..... .+++.+ +..|..+. .++.|.++|..+.+...+ ..++.+.+. +|+..|..-.+.. |.
T Consensus 103 ~~~~G---wglt~d--g~~L~vSd--gs~~l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~-I~ 173 (243)
T 3mbr_X 103 YPGEG---WALTSD--DSHLYMSD--GTAVIRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSR-IA 173 (243)
T ss_dssp CSSCC---CEEEEC--SSCEEEEC--SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTE-EE
T ss_pred CCCCc---eEEeeC--CCEEEEEC--CCCeEEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCe-EE
Confidence 65443 344444 33444444 267899999998776533 345666665 6765555544544 67
Q ss_pred EEEcCCCceeEeeccCC-----------cceeEEEEEeecCCCcccEEEEEeCCCcEEEEec
Q 019672 201 VFLVSEATKSYSFRRGT-----------YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSP 251 (337)
Q Consensus 201 vwd~~~~~~~~~~~~~~-----------~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l 251 (337)
+.|.++|+.+..+.... .....+.||++|+++ .|.+++.. -=++|.+
T Consensus 174 vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~---~lfVTGK~-wp~~~~v 231 (243)
T 3mbr_X 174 RIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHD---RLFVTGKR-WPMLYEI 231 (243)
T ss_dssp EECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTT---EEEEEETT-CSEEEEE
T ss_pred EEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCC---EEEEECCC-CCcEEEE
Confidence 99999999887764221 113478999999988 66666554 2344444
No 229
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.96 E-value=5.4e-08 Score=95.50 Aligned_cols=185 Identities=19% Similarity=0.132 Sum_probs=111.8
Q ss_pred CCEEEEEcCC-ceEEEeCCCCcEEEEEeeCCEE-----------EEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 19 NSGFALSTKD-GFKIFDSSTGRLCYERAVGAFS-----------IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 19 g~~la~g~~~-g~~vw~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
+..+.+++.+ .+.-+|..+|+++...+...-. ..........+ +++. .|+.|..+|.++|+
T Consensus 70 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~g~v-~v~~------~dg~l~AlDa~TG~ 142 (689)
T 1yiq_A 70 DGVMYTTGPFSVVYALDARDGRLIWKYDPQSDRHRAGEACCDAVNRGVAVWKGKV-YVGV------LDGRLEAIDAKTGQ 142 (689)
T ss_dssp TTEEEEECGGGCEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEETTEE-EEEC------TTSEEEEEETTTCC
T ss_pred CCEEEEEcCCCeEEEEECCCCceeEEEcCCCCccccccccccCCCCccEEECCEE-EEEc------cCCEEEEEECCCCC
Confidence 3455555554 4789999999998776432100 00011123333 4443 48999999999999
Q ss_pred EEEEEEcC-C-----cee-EEEEcCCeEEEEE-------CCeEEEEECCCCeeeeeecCCC-CCc---------------
Q 019672 87 ALRELNFL-T-----SIL-AVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVP-NLK--------------- 136 (337)
Q Consensus 87 ~~~~~~~~-~-----~v~-~i~~~~~~~~v~~-------d~~i~i~d~~~~~~~~~~~~~~-~~~--------------- 136 (337)
.+-++... . .+. .-.+..+.+++.. ++.|+.||..+++.+..+...+ ++.
T Consensus 143 ~~W~~~~~~~~~~~~~~~~sP~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~ 222 (689)
T 1yiq_A 143 RAWSVDTRADHKRSYTITGAPRVVNGKVVIGNGGAEFGVRGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTW 222 (689)
T ss_dssp EEEEEECCSCTTSCCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTC
T ss_pred EeeeecCcCCCCCCccccCCcEEECCEEEEEeCCCccCCCCEEEEEECCCCcEEEEecccCCCccccccccccccccccc
Confidence 98877653 1 111 1112345555543 4789999999999887775321 110
Q ss_pred ----------e---EEEEeeCCCccEEEEcCCCCcc-------------------EEEEEEccCCccccc----------
Q 019672 137 ----------G---LCAFSPSLNACFLAVPASTTKG-------------------SVLVYNVMELHSHCE---------- 174 (337)
Q Consensus 137 ----------~---~~~~~~~~~~~~la~~~~~~dg-------------------~v~i~d~~~~~~~~~---------- 174 (337)
+ -...+.+++..+++++.. ++ .|..+|..+++..-.
T Consensus 223 ~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~--~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd 300 (689)
T 1yiq_A 223 FGDAYVEQGGGGTAWDSFAYDPELNLLYIGVG--NGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWD 300 (689)
T ss_dssp CSSTHHHHCEECCCCSCEEEETTTTEEEEECC--CEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSC
T ss_pred CCceeeecCCCCccccceeEcCCCCEEEEeCC--CCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCccccc
Confidence 0 012344555556666552 44 499999999876421
Q ss_pred ----CceEEEEeCCCCC---EEEEEeCCCcEEEEEEcCCCceeEee
Q 019672 175 ----APLAAIVLSSNGM---YIATASEQGTIIRVFLVSEATKSYSF 213 (337)
Q Consensus 175 ----~~i~~~~~s~dg~---~lat~s~dg~~i~vwd~~~~~~~~~~ 213 (337)
.++....+..+|+ .++.++.+|. ++++|.++|+.+...
T Consensus 301 ~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~ 345 (689)
T 1yiq_A 301 YTATQHMILAELPIDGKPRKVLMQAPKNGF-FYVIDRATGELLSAK 345 (689)
T ss_dssp CCCCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEE
T ss_pred ccCCCCcEEEeeccCCcEEEEEEEECCCCe-EEEEECCCCCEeccc
Confidence 1222222233665 7889999997 689999999988543
No 230
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.96 E-value=4.7e-07 Score=77.75 Aligned_cols=186 Identities=10% Similarity=0.006 Sum_probs=125.4
Q ss_pred eEEEEEcCCCCEEEEEc---CCceEEEeCCCCcEEEEEeeCC--EEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC
Q 019672 10 VFFVSFNQDNSGFALST---KDGFKIFDSSTGRLCYERAVGA--FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (337)
Q Consensus 10 v~~~~fs~dg~~la~g~---~~g~~vw~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~ 84 (337)
-..+.|++|+.++.+.+ .+.++++|+.+++.+....... .. ..+....+.+..+.- .++.+.++|..+
T Consensus 23 ~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fg-eGi~~~g~~lyv~t~------~~~~v~viD~~t 95 (266)
T 2iwa_A 23 TQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFG-EGLTLLNEKLYQVVW------LKNIGFIYDRRT 95 (266)
T ss_dssp EEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCE-EEEEEETTEEEEEET------TCSEEEEEETTT
T ss_pred cccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcce-EEEEEeCCEEEEEEe------cCCEEEEEECCC
Confidence 46899999975555443 2457999999999887764322 11 123334555555554 489999999999
Q ss_pred CCEEEEEEcC-CceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCc---eEEEEeeCCCccEEEEcCCCCcc
Q 019672 85 GTALRELNFL-TSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLK---GLCAFSPSLNACFLAVPASTTKG 159 (337)
Q Consensus 85 ~~~~~~~~~~-~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~la~~~~~~dg 159 (337)
.+.+.++... ..-..+..+++.++++. +++|.++|..+.+.+..+....++. ....+.+. ++...+... .++
T Consensus 96 ~~v~~~i~~g~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~--~~~ 172 (266)
T 2iwa_A 96 LSNIKNFTHQMKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIW--QTD 172 (266)
T ss_dssp TEEEEEEECCSSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEET--TSS
T ss_pred CcEEEEEECCCCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEE-CCEEEEecC--CCC
Confidence 9999999876 44456777777888765 6799999999998888886543211 12233333 344444433 478
Q ss_pred EEEEEEccCCccccc------------------CceEEEEeCCCCCEEEEEe-CCCcEEEEEEcCC
Q 019672 160 SVLVYNVMELHSHCE------------------APLAAIVLSSNGMYIATAS-EQGTIIRVFLVSE 206 (337)
Q Consensus 160 ~v~i~d~~~~~~~~~------------------~~i~~~~~s~dg~~lat~s-~dg~~i~vwd~~~ 206 (337)
.|.+.|..+++.... ...+.|+|+|++++|..++ ..++ +.+.++..
T Consensus 173 ~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTgk~~~~-v~~i~l~~ 237 (266)
T 2iwa_A 173 CIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTGKLWPK-LFEIKLHL 237 (266)
T ss_dssp EEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEETTCSE-EEEEEEEE
T ss_pred eEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEECCCCCe-EEEEEEec
Confidence 999999998875432 1358999999987655555 4554 46666654
No 231
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.96 E-value=1.9e-07 Score=92.40 Aligned_cols=229 Identities=13% Similarity=0.024 Sum_probs=136.1
Q ss_pred cCCCCEEEEEc-CCc---eEEEe--CC---CCc--EEEEEe----eC--CEEEEEEccCCCEEEEEeCCCCCCCCCceEE
Q 019672 16 NQDNSGFALST-KDG---FKIFD--SS---TGR--LCYERA----VG--AFSIVEMLYSSSLLAIVGAGEQPSLSPRRLC 78 (337)
Q Consensus 16 s~dg~~la~g~-~~g---~~vw~--~~---~~~--~~~~~~----~~--~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~ 78 (337)
+|||++++-.. +.+ -.+|. .. .++ .+.... .+ .+....++++++.+++.+... +....+|+
T Consensus 115 ~pdG~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~lld~~~l~~~~~~~~~~~~~SPDG~~la~~~~~~--G~e~~~i~ 192 (741)
T 1yr2_A 115 QRRGASVFYSWNSGLMNQSQLLVRPADAPVGTKGRVLLDPNTWAKDGATALDAWAASDDGRLLAYSVQDG--GSDWRTVK 192 (741)
T ss_dssp EEETTEEEEEEECSSCSSCEEEEEETTSCTTCCCEEEECGGGCC----EEEEEEEECTTSSEEEEEEEET--TCSEEEEE
T ss_pred EEECCEEEEEEEcCCCeEEEEEEEcCCccCCCCCEEEECHHHhccCCCEEEEeEEECCCCCEEEEEEcCC--CCceEEEE
Confidence 38999877544 333 35664 33 332 222211 12 344566777888888775410 01125799
Q ss_pred EEECCCCCEEEEEEcCCceeEEEEcCC-eEEEEE-CC--------------eEEEEECCCCee--eeeecCCCCCceEEE
Q 019672 79 LFNTTTGTALRELNFLTSILAVRLNKK-RLVIVL-RE--------------KTYIYDANTLAI--LDTIDTVPNLKGLCA 140 (337)
Q Consensus 79 iwd~~~~~~~~~~~~~~~v~~i~~~~~-~~~v~~-d~--------------~i~i~d~~~~~~--~~~~~~~~~~~~~~~ 140 (337)
+||+.+++.+........+..+.|+++ .++.+. ++ .|++|++.+++. ...+....++.....
T Consensus 193 v~dl~tg~~~~~~~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~ 272 (741)
T 1yr2_A 193 FVGVADGKPLADELKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHG 272 (741)
T ss_dssp EEETTTCCEEEEEEEEEESCCCEESTTSEEEEEECCCC--------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEE
T ss_pred EEECCCCCCCCccCCCceeccEEEECCCEEEEEEecCcccccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEE
Confidence 999999987654211122346778776 344443 32 389999987652 222333333334667
Q ss_pred EeeCCCccEEEEcCCC---CccEEEEEEccCC--c-c--c--ccCceEEEEeCCCCCEEEEEeCCCc---EEEEEEcCCC
Q 019672 141 FSPSLNACFLAVPAST---TKGSVLVYNVMEL--H-S--H--CEAPLAAIVLSSNGMYIATASEQGT---IIRVFLVSEA 207 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~---~dg~v~i~d~~~~--~-~--~--~~~~i~~~~~s~dg~~lat~s~dg~---~i~vwd~~~~ 207 (337)
+.++|++.+|++.... ....|.+||+.++ . . + +...+.... +|+|+.|+..+.++. -|.+||+.++
T Consensus 273 ~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~-~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 273 ASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFV-DGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp EEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEE-EEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred EEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEE-eccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 7788899888766531 1348999999765 3 1 1 113344443 489999988876432 2578999875
Q ss_pred c-eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 208 T-KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 208 ~-~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
. ....+..+ +...+.+++|+ ++. ++++...|+..+||.++
T Consensus 352 ~~~~~~l~~~-~~~~l~~~~~~-~~~---lv~~~~~dg~~~l~~~~ 392 (741)
T 1yr2_A 352 TPRFDTVVPE-SKDNLESVGIA-GNR---LFASYIHDAKSQVLAFD 392 (741)
T ss_dssp SCEEEEEECC-CSSEEEEEEEE-BTE---EEEEEEETTEEEEEEEE
T ss_pred ccccEEEecC-CCCeEEEEEEE-CCE---EEEEEEECCEEEEEEEe
Confidence 2 33444332 23457778887 555 88899999998888764
No 232
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.90 E-value=5.3e-06 Score=73.55 Aligned_cols=185 Identities=9% Similarity=-0.048 Sum_probs=117.3
Q ss_pred EEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEEcCCe-EEEEECCeEEEEECCCCeeeeeecC
Q 019672 53 EMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR-LVIVLREKTYIYDANTLAILDTIDT 131 (337)
Q Consensus 53 ~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~d~~i~i~d~~~~~~~~~~~~ 131 (337)
.+..+...+.++.. .++.|..||..+++. ..+.....+.++.+++++ ++++..+.|.+||..+++.......
T Consensus 55 ~~~~~~~~l~~~d~------~~~~i~~~d~~~~~~-~~~~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~~~~~~~ 127 (326)
T 2ghs_A 55 TFDPASGTAWWFNI------LERELHELHLASGRK-TVHALPFMGSALAKISDSKQLIASDDGLFLRDTATGVLTLHAEL 127 (326)
T ss_dssp EEETTTTEEEEEEG------GGTEEEEEETTTTEE-EEEECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCEEEEECS
T ss_pred eEeCCCCEEEEEEC------CCCEEEEEECCCCcE-EEEECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcEEEEeeC
Confidence 34444456666654 367999999987753 445566788899887654 5556677899999987765332221
Q ss_pred CC--CCceEEEEeeCCCccEEEEcCCC----CccEEEEEEccCCcccc----cCceEEEEeCCCCCEEEEEe-CCCcEEE
Q 019672 132 VP--NLKGLCAFSPSLNACFLAVPAST----TKGSVLVYNVMELHSHC----EAPLAAIVLSSNGMYIATAS-EQGTIIR 200 (337)
Q Consensus 132 ~~--~~~~~~~~~~~~~~~~la~~~~~----~dg~v~i~d~~~~~~~~----~~~i~~~~~s~dg~~lat~s-~dg~~i~ 200 (337)
.. ....+..+..++++.+.+..... ..+.|..+| +++... ....+.++|+|||+.|..+. .++. |.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~-I~ 204 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVDTKVNR-LM 204 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEETTTCE-EE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEECCCCE-EE
Confidence 11 12345677778888766543210 124566666 333221 14578999999999775554 4555 68
Q ss_pred EEEcC--CC-ce-----eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 201 VFLVS--EA-TK-----SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 201 vwd~~--~~-~~-----~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
+||+. +| +. +..+.. .......++++++|. ++++...++.|.+|+.+
T Consensus 205 ~~d~~~~~Gl~~~~~~~~~~~~~--~~~~p~gi~~d~~G~---lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 205 RVPLDARTGLPTGKAEVFIDSTG--IKGGMDGSVCDAEGH---IWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEBCTTTCCBSSCCEEEEECTT--SSSEEEEEEECTTSC---EEEEEETTTEEEEECTT
T ss_pred EEEcccccCCcccCceEEEECCC--CCCCCCeeEECCCCC---EEEEEeCCCEEEEECCC
Confidence 99986 66 32 222211 123467899999998 77777777889999873
No 233
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.85 E-value=1.1e-09 Score=99.40 Aligned_cols=170 Identities=11% Similarity=0.022 Sum_probs=92.0
Q ss_pred CCceEEEEECCCCCEEEEEEcCCceeEEEEc-CCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCC-Ccc
Q 019672 73 SPRRLCLFNTTTGTALRELNFLTSILAVRLN-KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSL-NAC 148 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~-~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 148 (337)
.|+.|..||.++|+.+.++.. .++.+..+. .+.++++. |+.++.||..+++.+..+..... .....++.- .+.
T Consensus 17 ~dg~v~a~d~~tG~~~W~~~~-~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~--~~~~~sp~~~~~~ 93 (369)
T 2hz6_A 17 LDGSLHAVSKRTGSIKWTLKE-DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP--ELVQASPCRSSDG 93 (369)
T ss_dssp TTSEEEEEETTTCCEEEEEEC-CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH--HHHTTCSCC----
T ss_pred CCCEEEEEECCCCCEEEEecC-CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc--cccccCceEecCC
Confidence 389999999999999988876 544433332 33344443 88999999988877655532210 000001110 223
Q ss_pred EEEEcCCCCccEEEEEEccCCcccccCc-eEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEe
Q 019672 149 FLAVPASTTKGSVLVYNVMELHSHCEAP-LAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSF 227 (337)
Q Consensus 149 ~la~~~~~~dg~v~i~d~~~~~~~~~~~-i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~f 227 (337)
.+++++ .++.|..||..+++...+.. -....++|++..+++++.||. |+.||.++|+.+.++... .....++
T Consensus 94 ~v~~g~--~dg~v~a~D~~tG~~~w~~~~~~~~~~~p~~~~v~~~~~dg~-v~a~d~~tG~~~W~~~~~----~~~~~~~ 166 (369)
T 2hz6_A 94 ILYMGK--KQDIWYVIDLLTGEKQQTLSSAFADSLSPSTSLLYLGRTEYT-ITMYDTKTRELRWNATYF----DYAASLP 166 (369)
T ss_dssp -CCCCE--EEEEEEEECCC----------------------EEEEEEEEE-EECCCSSSSSCCCEEEEE----EECCBCC
T ss_pred EEEEEe--CCCEEEEEECCCCcEEEEecCCCcccccccCCEEEEEecCCE-EEEEECCCCCEEEeEecc----cccCccc
Confidence 444444 48999999999988764411 113456778889999999987 589999999987766421 1223344
Q ss_pred ecCC---CcccEEEEEeCCCcEEEEecCCCc
Q 019672 228 GQSM---QFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 228 s~dg---~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
+++. . .+++++.||.|+.||.++++
T Consensus 167 ~~~~~~~~---~v~~~~~dg~v~a~d~~tG~ 194 (369)
T 2hz6_A 167 EDDVDYKM---SHFVSNGDGLVVTVDSESGD 194 (369)
T ss_dssp CCCTTCCC---CEEEEETSCEEEEECTTTCC
T ss_pred cCCccccc---eEEEECCCCEEEEEECCCCc
Confidence 5432 3 57788999999999987664
No 234
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.78 E-value=6.6e-08 Score=85.37 Aligned_cols=212 Identities=11% Similarity=0.106 Sum_probs=126.9
Q ss_pred EEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEE
Q 019672 12 FVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALREL 91 (337)
Q Consensus 12 ~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~ 91 (337)
+..+..+|..++...++++..|| .+++.+............+..+.+..++++. .+ |..+|. +++.+..+
T Consensus 24 ~~~~d~~g~l~v~t~~~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t-------~~-l~~~d~-~g~~~~~~ 93 (330)
T 3hxj_A 24 SPILAKNGTIYLGSSNKNLYAIN-TDGSVKWFFKSGEIIECRPSIGKDGTIYFGS-------DK-VYAINP-DGTEKWRF 93 (330)
T ss_dssp CCEECTTSCEECSSTTTTTEEEC-TTSCEEESSCGGGEEEECCEETTTTEECCSS-------CE-EEEECC-CGGGGGGS
T ss_pred CceEccCCeEEEEcCCCEEEEEC-CCCcEEEEEecCCCcccceEEecCCcEEEec-------Cc-EEEECC-CCcEEEEE
Confidence 34556677654444456789999 8888766544333333333444344445554 34 888886 55543322
Q ss_pred EcCCc-eeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCC
Q 019672 92 NFLTS-ILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMEL 169 (337)
Q Consensus 92 ~~~~~-v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~ 169 (337)
..... .....+..+.+.+++ ++.+..+|.. ++........... +.++..++++.+.+ +. .++.|..+|.. +
T Consensus 94 ~~~~~~~~~~~~~~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~--~~~~~~~~~g~l~v-gt--~~~~l~~~d~~-g 166 (330)
T 3hxj_A 94 DTKKAIVSDFTIFEDILYVTSMDGHLYAINTD-GTEKWRFKTKKAI--YATPIVSEDGTIYV-GS--NDNYLYAINPD-G 166 (330)
T ss_dssp CC-----CCEEEETTEEEEECTTSEEEEECTT-SCEEEEEECSSCC--CSCCEECTTSCEEE-EC--TTSEEEEECTT-S
T ss_pred ECCCCcccCceEECCEEEEEecCCEEEEEcCC-CCEEEEEcCCCce--eeeeEEcCCCEEEE-Ec--CCCEEEEECCC-C
Confidence 22221 122233466777777 7899999988 7666555433221 22233344555444 33 36889999988 5
Q ss_pred cccc-----cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCC
Q 019672 170 HSHC-----EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG 244 (337)
Q Consensus 170 ~~~~-----~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg 244 (337)
+... ...+.++.++++|...+.. +. +..+| .+++.+..+... ...+.++...++|. |..++.++
T Consensus 167 ~~~~~~~~~~~~~~~~~~d~~g~l~v~t---~~-l~~~d-~~g~~~~~~~~~--~~~~~~~~~~~~g~----l~v~t~~~ 235 (330)
T 3hxj_A 167 TEKWRFKTNDAITSAASIGKDGTIYFGS---DK-VYAIN-PDGTEKWNFYAG--YWTVTRPAISEDGT----IYVTSLDG 235 (330)
T ss_dssp CEEEEEECSSCCCSCCEECTTCCEEEES---SS-EEEEC-TTSCEEEEECCS--SCCCSCCEECTTSC----EEEEETTT
T ss_pred CEeEEEecCCCceeeeEEcCCCEEEEEe---CE-EEEEC-CCCcEEEEEccC--CcceeceEECCCCe----EEEEcCCC
Confidence 5432 2557778888888866544 55 46899 788877666432 23477888888887 66667777
Q ss_pred cEEEEec
Q 019672 245 SLHVFSP 251 (337)
Q Consensus 245 ~v~iw~l 251 (337)
.|..++.
T Consensus 236 gl~~~~~ 242 (330)
T 3hxj_A 236 HLYAINP 242 (330)
T ss_dssp EEEEECT
T ss_pred eEEEECC
Confidence 8888874
No 235
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.76 E-value=1.8e-06 Score=73.46 Aligned_cols=177 Identities=9% Similarity=0.005 Sum_probs=118.2
Q ss_pred eEEEEEcCCCCEEEEEcCC---ceEEEeCCCCcEEEEEeeCC-EEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 10 VFFVSFNQDNSGFALSTKD---GFKIFDSSTGRLCYERAVGA-FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 10 v~~~~fs~dg~~la~g~~~---g~~vw~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
.-.+.|+ ++.++.+.+.+ .++++|+++++.+....... ..-..+....+.+..+.. .++.+.++|.++.
T Consensus 45 tqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw------~~~~v~v~D~~t~ 117 (262)
T 3nol_A 45 TEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTW------KNGLGFVWNIRNL 117 (262)
T ss_dssp EEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEES------SSSEEEEEETTTC
T ss_pred cceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEe------eCCEEEEEECccC
Confidence 3567888 66655544443 47999999999887765432 111123334566655554 4899999999999
Q ss_pred CEEEEEEcCCceeEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCC---ceEEEEeeCCCccEEEEcCCCCccEE
Q 019672 86 TALRELNFLTSILAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNL---KGLCAFSPSLNACFLAVPASTTKGSV 161 (337)
Q Consensus 86 ~~~~~~~~~~~v~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~la~~~~~~dg~v 161 (337)
+.+.++.....=.++..+.+.++++. +++|.++|..+.+.+..+....+. ..+..+.+. ++.+.+..- .++.|
T Consensus 118 ~~~~ti~~~~eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w--~~~~I 194 (262)
T 3nol_A 118 RQVRSFNYDGEGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVW--QTNKI 194 (262)
T ss_dssp CEEEEEECSSCCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEET--TSSEE
T ss_pred cEEEEEECCCCceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEc--cCCeE
Confidence 99999988765567777777777665 568999999999988887653221 112223332 344444333 36789
Q ss_pred EEEEccCCccccc-----------------CceEEEEeCCCCCEEEEEeCCC
Q 019672 162 LVYNVMELHSHCE-----------------APLAAIVLSSNGMYIATASEQG 196 (337)
Q Consensus 162 ~i~d~~~~~~~~~-----------------~~i~~~~~s~dg~~lat~s~dg 196 (337)
.+.|..+++.... .-.+.|||+|+++.|...+..=
T Consensus 195 ~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~W 246 (262)
T 3nol_A 195 VRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKLW 246 (262)
T ss_dssp EEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETTC
T ss_pred EEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCCC
Confidence 9999888775321 2458999999888777666543
No 236
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.73 E-value=1.1e-06 Score=86.11 Aligned_cols=227 Identities=11% Similarity=0.127 Sum_probs=140.8
Q ss_pred CCEEEEEcCCc-eEEEeCCCCcEEEEEeeC-C----EEEE--EEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEE
Q 019672 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVG-A----FSIV--EMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRE 90 (337)
Q Consensus 19 g~~la~g~~~g-~~vw~~~~~~~~~~~~~~-~----~~~~--~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~ 90 (337)
+..+++++.++ +..+|..+|+++...... + ..+. -... .+.+ +++.+......++.|..||.++|+.+-+
T Consensus 121 ~g~v~v~~~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~~~sP~v~-~g~v-~vg~~~~~~~~~g~v~a~D~~tG~~~W~ 198 (689)
T 1yiq_A 121 KGKVYVGVLDGRLEAIDAKTGQRAWSVDTRADHKRSYTITGAPRVV-NGKV-VIGNGGAEFGVRGYVTAYDAETGKEAWR 198 (689)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCSCTTSCCBCCSCCEEE-TTEE-EECCBCTTTCCBCEEEEEETTTCCEEEE
T ss_pred CCEEEEEccCCEEEEEECCCCCEeeeecCcCCCCCCccccCCcEEE-CCEE-EEEeCCCccCCCCEEEEEECCCCcEEEE
Confidence 45677777655 699999999998776532 1 0000 0011 2333 3332100001378999999999999877
Q ss_pred EEcC-C-c-----------------------------e-eEEEEcC--CeEEEEE-CC-------------------eEE
Q 019672 91 LNFL-T-S-----------------------------I-LAVRLNK--KRLVIVL-RE-------------------KTY 116 (337)
Q Consensus 91 ~~~~-~-~-----------------------------v-~~i~~~~--~~~~v~~-d~-------------------~i~ 116 (337)
+... . + + ..+.+++ +.+++.. ++ .|.
T Consensus 199 ~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~ 278 (689)
T 1yiq_A 199 FYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIV 278 (689)
T ss_dssp EESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEE
T ss_pred ecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEE
Confidence 6531 0 0 0 1345554 4455544 32 399
Q ss_pred EEECCCCeeeeeecCCCCC---------ceEEEEeeCCC-ccEEEEcCCCCccEEEEEEccCCccccc---Cc-------
Q 019672 117 IYDANTLAILDTIDTVPNL---------KGLCAFSPSLN-ACFLAVPASTTKGSVLVYNVMELHSHCE---AP------- 176 (337)
Q Consensus 117 i~d~~~~~~~~~~~~~~~~---------~~~~~~~~~~~-~~~la~~~~~~dg~v~i~d~~~~~~~~~---~~------- 176 (337)
.+|..+++.+..++...+. ..+..+..++. ...++.+. .+|.+.++|..+++.+.. .+
T Consensus 279 AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~ 356 (689)
T 1yiq_A 279 AVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAP--KNGFFYVIDRATGELLSAKGIVPQSWTKGM 356 (689)
T ss_dssp EEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECC--TTSEEEEEETTTCCEEEEEESSCCSSEEEE
T ss_pred EEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEEC--CCCeEEEEECCCCCEecccccccccccccc
Confidence 9999999998877653221 11112222221 12566665 589999999998876511 00
Q ss_pred ----------------------------------eEEEEeCCCCCEEEEEeC----------------------------
Q 019672 177 ----------------------------------LAAIVLSSNGMYIATASE---------------------------- 194 (337)
Q Consensus 177 ----------------------------------i~~~~~s~dg~~lat~s~---------------------------- 194 (337)
-..++|+|+..++.+.+.
T Consensus 357 ~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 436 (689)
T 1yiq_A 357 DMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMSYNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRT 436 (689)
T ss_dssp ETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEE
T ss_pred CccCCCcccchhhccccCCCCeeEeCCCcccccCCCcceECCCCCEEEEeccccceeeeeccccccccccccccccCccc
Confidence 112789998888777643
Q ss_pred -----------------CCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 195 -----------------QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 195 -----------------dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
+|. |+.||+.+|+.+.++..+. ++..-.++..+. +++.++.||.++.||.++++.
T Consensus 437 ~~~p~~~~~~~~~~~~~~g~-l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagg---lvf~gt~dg~l~a~D~~tG~~ 508 (689)
T 1yiq_A 437 GMMPEGAEGLLEMAKSWSGK-LIAWDPVKQQAAWEVPYVT---IFNGGTLSTAGN---LVFEGSADGRVIAYAADTGEK 508 (689)
T ss_dssp CCCCSSHHHHHHHHTTCEEE-EEEEETTTTEEEEEEEESS---SCCCCEEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred cccCcccccCCCCCCCccee-EEEEECCCCCeEeEccCCC---CccCccceECCC---EEEEECCCCcEEEEECCCCcc
Confidence 255 6899999999988775432 223335666777 899999999999999998765
No 237
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.64 E-value=5.9e-06 Score=81.07 Aligned_cols=194 Identities=9% Similarity=0.057 Sum_probs=112.7
Q ss_pred EEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEE-cCCeEEEEE-C-------------C
Q 019672 49 FSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKRLVIVL-R-------------E 113 (337)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~~~v~~-d-------------~ 113 (337)
+....++++++.++++.... +....+|++||+++++.+...........+.| +.+.++.+. + .
T Consensus 131 l~~~~~SpDg~~lAy~~~~~--G~~~~~i~v~dl~tg~~~~~~~~~~k~~~~~WsDg~~l~y~~~~~~~~~~~~~~~~~~ 208 (693)
T 3iuj_A 131 LDQLSFSRDGRILAYSLSLA--GSDWREIHLMDVESKQPLETPLKDVKFSGISWLGNEGFFYSSYDKPDGSELSARTDQH 208 (693)
T ss_dssp EEEEEECTTSSEEEEEEECS--SCCEEEEEEEETTTCSEEEEEEEEEESCCCEEETTTEEEEEESSCCC-------CCCC
T ss_pred EEEEEECCCCCEEEEEEecC--CCceEEEEEEECCCCCCCccccCCceeccEEEeCCCEEEEEEecCcccccccccCCCc
Confidence 44456777888888765210 02346899999999986543111111223445 455666665 3 2
Q ss_pred eEEEEECCCCee--eeeecCCC-CCceEEEEeeCCCccEEEEcCC--CCccEEEEEEccCCcc----c--ccCceEEEEe
Q 019672 114 KTYIYDANTLAI--LDTIDTVP-NLKGLCAFSPSLNACFLAVPAS--TTKGSVLVYNVMELHS----H--CEAPLAAIVL 182 (337)
Q Consensus 114 ~i~i~d~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~~la~~~~--~~dg~v~i~d~~~~~~----~--~~~~i~~~~~ 182 (337)
.|++|++.+.+. ...+.... ++.....+..+|++.+|+.... .....|.++|+.++.. + +....... +
T Consensus 209 ~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~-~ 287 (693)
T 3iuj_A 209 KVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL-V 287 (693)
T ss_dssp EEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE-E
T ss_pred EEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE-E
Confidence 499999987642 22222222 2334566677888888765431 1235899999876531 1 11333343 6
Q ss_pred CCCCCEEEEEeC-C---CcEEEEEEcCCCce--eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCC---cEEEEecCC
Q 019672 183 SSNGMYIATASE-Q---GTIIRVFLVSEATK--SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG---SLHVFSPGF 253 (337)
Q Consensus 183 s~dg~~lat~s~-d---g~~i~vwd~~~~~~--~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg---~v~iw~l~~ 253 (337)
+++|..|+..+. + +. |.++|+.+++. ...+..+. .. +. .|+++++ +|+....++ .|++|+++.
T Consensus 288 ~~~g~~l~~~t~~~~~~~~-l~~~d~~~~~~~~~~~l~~~~-~~-~~--~~s~~g~---~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 288 DNKGSTLYLLTNRDAPNRR-LVTVDAANPGPAHWRDLIPER-QQ-VL--TVHSGSG---YLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEETTEEEEEECTTCTTCE-EEEEETTSCCGGGCEEEECCC-SS-CE--EEEEETT---EEEEEEEETTEEEEEEECTTS
T ss_pred eccCCEEEEEECCCCCCCE-EEEEeCCCCCccccEEEecCC-CC-EE--EEEEECC---EEEEEEEECCeeEEEEEECCC
Confidence 677666554443 3 44 56899987654 23443222 22 33 8999998 777665544 688888864
No 238
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.62 E-value=2.4e-05 Score=71.74 Aligned_cols=172 Identities=8% Similarity=-0.012 Sum_probs=103.6
Q ss_pred CCceEEEEECCCCCEEEEEEcCCceeEEEEcCCe--EEEEE-CC--eEEEEECCCCeeeeee---cCCCCCceEEEEeeC
Q 019672 73 SPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--LVIVL-RE--KTYIYDANTLAILDTI---DTVPNLKGLCAFSPS 144 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--~~v~~-d~--~i~i~d~~~~~~~~~~---~~~~~~~~~~~~~~~ 144 (337)
.++.|+.||..+++............ ++++++. ++++. ++ .|.+++...+.....+ .. .......+++.+
T Consensus 150 ~~~~I~~id~~~g~~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~-~~~~~p~~iav~ 227 (409)
T 3hrp_A 150 DDPRVRLISVDDNKVTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGS-TFSGKIGAVALD 227 (409)
T ss_dssp TTTEEEEEETTTTEEEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCT-TSCSCCCBCEEC
T ss_pred CCCcEEEEECCCCEEEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCceeEEeeeccc-hhcCCcEEEEEe
Confidence 36899999998877655444433334 7777654 44544 23 7999988655433333 11 011122334555
Q ss_pred CCccEEEEcCCCCccEEEEEEccCCcccc------c-----CceEEEEeCCC-CCEEEEEeCCCcEEEEEEcCCCceeEe
Q 019672 145 LNACFLAVPASTTKGSVLVYNVMELHSHC------E-----APLAAIVLSSN-GMYIATASEQGTIIRVFLVSEATKSYS 212 (337)
Q Consensus 145 ~~~~~la~~~~~~dg~v~i~d~~~~~~~~------~-----~~i~~~~~s~d-g~~lat~s~dg~~i~vwd~~~~~~~~~ 212 (337)
|++..|.++. .++.|..||..+..... . .|.+.++|+|+ +.++++-+..++ |+.|+.... . ..
T Consensus 228 p~~g~lyv~d--~~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~-I~~~~~~g~-~-~~ 302 (409)
T 3hrp_A 228 ETEEWLYFVD--SNKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSS-VYKITPDGE-C-EW 302 (409)
T ss_dssp TTSSEEEEEC--TTCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTE-EEEECTTCC-E-EE
T ss_pred CCCCeEEEEE--CCCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCE-EEEEecCCC-E-EE
Confidence 6333444444 47899999987654211 1 12239999995 555555555665 688987543 2 22
Q ss_pred ec-cC----Cc--------ceeEEEEEeecCCCcccEEEEEe-CCCcEEEEecCCC
Q 019672 213 FR-RG----TY--------PSTIFSLSFGQSMQFQDILVATS-SSGSLHVFSPGFA 254 (337)
Q Consensus 213 ~~-~~----~~--------~~~i~~l~fs~dg~~~~~las~s-~dg~v~iw~l~~~ 254 (337)
+. .. .. -.....++|+|+|+ ++++-+ .++.|+.|++..+
T Consensus 303 ~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~---lyvad~~~~~~I~~~~~~~G 355 (409)
T 3hrp_A 303 FCGSATQKTVQDGLREEALFAQPNGMTVDEDGN---FYIVDGFKGYCLRKLDILDG 355 (409)
T ss_dssp EEECTTCCSCBCEEGGGCBCSSEEEEEECTTCC---EEEEETTTTCEEEEEETTTT
T ss_pred EEeCCCCCCcCCCcccccEeCCCeEEEEeCCCC---EEEEeCCCCCEEEEEECCCC
Confidence 21 10 00 12368899999999 888888 8899999997544
No 239
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=98.60 E-value=4.2e-06 Score=81.74 Aligned_cols=184 Identities=18% Similarity=0.119 Sum_probs=110.1
Q ss_pred CEEEEEcCC-ceEEEeCCCCcEEEEEeeCCEE-----------EEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE
Q 019672 20 SGFALSTKD-GFKIFDSSTGRLCYERAVGAFS-----------IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 20 ~~la~g~~~-g~~vw~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~ 87 (337)
..+.+++.+ .+.-+|..+|+++...+...-. ........+.+ +++. .|+.|..+|.++|+.
T Consensus 67 g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v-~v~~------~dg~l~alD~~tG~~ 139 (668)
T 1kv9_A 67 GVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKV-YVGT------LDGRLIALDAKTGKA 139 (668)
T ss_dssp TEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEE-EEEC------TTSEEEEEETTTCCE
T ss_pred CEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEE-EEEc------CCCEEEEEECCCCCE
Confidence 344555444 4688999999998776432100 00001122333 3443 489999999999999
Q ss_pred EEEEEcCC-----cee-EEEEcCCeEEEEE-------CCeEEEEECCCCeeeeeecCCC-CCce----------------
Q 019672 88 LRELNFLT-----SIL-AVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVP-NLKG---------------- 137 (337)
Q Consensus 88 ~~~~~~~~-----~v~-~i~~~~~~~~v~~-------d~~i~i~d~~~~~~~~~~~~~~-~~~~---------------- 137 (337)
+-++.... .+. .-.+..+.+++.. ++.|+.+|..+++.+.++...+ .+..
T Consensus 140 ~W~~~~~~~~~~~~~~~~P~v~~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g 219 (668)
T 1kv9_A 140 IWSQQTTDPAKPYSITGAPRVVKGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQG 219 (668)
T ss_dssp EEEEECSCTTSSCBCCSCCEEETTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCS
T ss_pred eeeeccCCCCCcceecCCCEEECCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCc
Confidence 88776531 111 1112345555543 3789999999999988775421 1110
Q ss_pred ------------EEEEeeCCCccEEEEcCCCCcc-------------------EEEEEEccCCccccc------------
Q 019672 138 ------------LCAFSPSLNACFLAVPASTTKG-------------------SVLVYNVMELHSHCE------------ 174 (337)
Q Consensus 138 ------------~~~~~~~~~~~~la~~~~~~dg-------------------~v~i~d~~~~~~~~~------------ 174 (337)
-...+.+++..+++++.. ++ .|..+|..+++..-.
T Consensus 220 ~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~--~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~ 297 (668)
T 1kv9_A 220 DQYWKLGGGGTVWDSMAYDPELDLLYVGTG--NGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFT 297 (668)
T ss_dssp SCHHHHCEECCCCSCEEEETTTTEEEEECC--CEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCC
T ss_pred cceeeeCCCCccccceEEcCCCCEEEEeCC--CCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcccccc
Confidence 012334444445555542 33 488899998876421
Q ss_pred --CceEEEEeCCCCC---EEEEEeCCCcEEEEEEcCCCceeEee
Q 019672 175 --APLAAIVLSSNGM---YIATASEQGTIIRVFLVSEATKSYSF 213 (337)
Q Consensus 175 --~~i~~~~~s~dg~---~lat~s~dg~~i~vwd~~~~~~~~~~ 213 (337)
.+.....+..+|+ .++.++.+|. +.++|..+|+.+...
T Consensus 298 ~~~~~~~~d~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~l~~~ 340 (668)
T 1kv9_A 298 ATQQITLAELNIDGKPRKVLMQAPKNGF-FYVLDRTNGKLISAE 340 (668)
T ss_dssp CCSCEEEEEEEETTEEEEEEEECCTTSE-EEEEETTTCCEEEEE
T ss_pred CCCCcEEEEeccCCcEEEEEEEECCCCE-EEEEECCCCCEeccc
Confidence 2233333334675 6888999997 589999999988544
No 240
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.60 E-value=2.9e-06 Score=72.23 Aligned_cols=161 Identities=8% Similarity=-0.035 Sum_probs=112.0
Q ss_pred CEEEEEEcCCc--eeEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEE
Q 019672 86 TALRELNFLTS--ILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSV 161 (337)
Q Consensus 86 ~~~~~~~~~~~--v~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v 161 (337)
+.+.++.+... ...+.++.+.+++++ ++.|+++|+.+++.+.++ ......+ ..+++.++..+.++- .++.+
T Consensus 44 ~Vv~~~phd~~~ftqGL~~~~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~Fg-eGit~~g~~Ly~ltw---~~~~v 118 (268)
T 3nok_A 44 HIIREYPHATNAFTQGLVFHQGHFFESTGHQGTLRQLSLESAQPVWME-RLGNIFA-EGLASDGERLYQLTW---TEGLL 118 (268)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTCCE-EEEEECSSCEEEEES---SSCEE
T ss_pred EEEEEEcCCCccccceEEEECCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCcce-eEEEEeCCEEEEEEc---cCCEE
Confidence 34567776653 478899999999888 668999999999998887 4443322 345565555454433 47999
Q ss_pred EEEEccCCccccc--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcce---eEEEEEeecCCCcccE
Q 019672 162 LVYNVMELHSHCE--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPS---TIFSLSFGQSMQFQDI 236 (337)
Q Consensus 162 ~i~d~~~~~~~~~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~---~i~~l~fs~dg~~~~~ 236 (337)
.+||..+.+.+.+ .+-....+.+||+.|+.+..+++ |.++|.++.+.+.++.-+.... .++.|.|. +|+ .
T Consensus 119 ~V~D~~Tl~~~~ti~~~~eGwGLt~Dg~~L~vSdGs~~-l~~iDp~T~~v~~~I~V~~~g~~v~~lNeLe~~-dG~---l 193 (268)
T 3nok_A 119 FTWSGMPPQRERTTRYSGEGWGLCYWNGKLVRSDGGTM-LTFHEPDGFALVGAVQVKLRGQPVELINELECA-NGV---I 193 (268)
T ss_dssp EEEETTTTEEEEEEECSSCCCCEEEETTEEEEECSSSE-EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE---E
T ss_pred EEEECCcCcEEEEEeCCCceeEEecCCCEEEEECCCCE-EEEEcCCCCeEEEEEEeCCCCcccccccccEEe-CCE---E
Confidence 9999999887644 11112233367888887776665 6899999999887775432222 35677877 777 6
Q ss_pred EEEEeCCCcEEEEecCCCcc
Q 019672 237 LVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 237 las~s~dg~v~iw~l~~~~~ 256 (337)
++..-.++.|.+.|.++++-
T Consensus 194 yanvw~s~~I~vIDp~TG~V 213 (268)
T 3nok_A 194 YANIWHSSDVLEIDPATGTV 213 (268)
T ss_dssp EEEETTCSEEEEECTTTCBE
T ss_pred EEEECCCCeEEEEeCCCCcE
Confidence 66666788999999887653
No 241
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.60 E-value=2.3e-06 Score=77.20 Aligned_cols=247 Identities=9% Similarity=-0.046 Sum_probs=143.6
Q ss_pred ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCC-CC--CCCCCceEEEEECCCCCEEEEEEcC--------Cce
Q 019672 29 GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAG-EQ--PSLSPRRLCLFNTTTGTALRELNFL--------TSI 97 (337)
Q Consensus 29 g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~~--~~~~d~~v~iwd~~~~~~~~~~~~~--------~~v 97 (337)
.+.++|.++++.+.....+....+.+.++...+.+...+ .. .+..+++|.+||+.+++.+.++..+ ...
T Consensus 47 ~vsvID~~t~~v~~~i~vG~~P~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g~~P 126 (368)
T 1mda_H 47 ENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVGPRV 126 (368)
T ss_dssp EEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBSCCT
T ss_pred eEEEEECCCCeEEEEEeCCCCCceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccCCCc
Confidence 567999999999877654333367777887776665420 00 0013689999999999999998765 234
Q ss_pred eEEEEcCC--eEEEEE---CCeEEE--EECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccC--
Q 019672 98 LAVRLNKK--RLVIVL---REKTYI--YDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVME-- 168 (337)
Q Consensus 98 ~~i~~~~~--~~~v~~---d~~i~i--~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~-- 168 (337)
..+.++++ .++++. ++.+.+ +|+.+ +.++..... ..+.+.+...+++.+ .||.+.+.|+.+
T Consensus 127 ~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~----~~~~p~g~~~~~~~~---~dg~~~~vd~~~~~ 196 (368)
T 1mda_H 127 HIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASC----FHIHPGAAATHYLGS---CPASLAASDLAAAP 196 (368)
T ss_dssp TSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSC----CCCEEEETTEEECCC---CTTSCEEEECCSSC
T ss_pred ceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCc----eEEccCCCeEEEEEc---CCCCEEEEECcccc
Confidence 56777765 466665 357888 88876 455543211 122333333333322 478888888876
Q ss_pred ---Cccc---------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc--eeEeeccC--------CcceeEEEEE
Q 019672 169 ---LHSH---------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT--KSYSFRRG--------TYPSTIFSLS 226 (337)
Q Consensus 169 ---~~~~---------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~--~~~~~~~~--------~~~~~i~~l~ 226 (337)
++.. -..|. + ++++..++..+. ++ +.+.|+.+++ .+..+... ..+.....++
T Consensus 197 ~~~~~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~-V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~ 270 (368)
T 1mda_H 197 AAAGIVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SS-ILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVA 270 (368)
T ss_dssp CCCEECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SC-CEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEE
T ss_pred ccCCeEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CE-EEEEECCCCcceEEEEEEeccccccccccccCcceeeE
Confidence 3321 01344 3 566666666666 77 5789986543 22222111 0011111268
Q ss_pred eecCCCcccEEEEEeC---------CCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCccc
Q 019672 227 FGQSMQFQDILVATSS---------SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKR 297 (337)
Q Consensus 227 fs~dg~~~~~las~s~---------dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~ 297 (337)
|+||++ .|.++.. ++.+.++|+.+.+...+.. ++. .-| .+.+.+++
T Consensus 271 ~s~dg~---~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~---------vg~---~p~----------gi~~s~Dg 325 (368)
T 1mda_H 271 KLKNTD---GIMILTVEHSRSCLAAAENTSSVTASVGQTSGPIS---------NGH---DSD----------AIIAAQDG 325 (368)
T ss_dssp EETTTT---EEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCE---------EEE---EEC----------EEEECCSS
T ss_pred EcCCCC---EEEEEeccccCcccccCCCEEEEECCCCeEEEEEE---------CCC---Ccc----------eEEECCCC
Confidence 999998 6666533 2457799998765433100 000 011 12235566
Q ss_pred CEEEEEEe--CCcEEEEEEec
Q 019672 298 ASVSVITY--NGYFVEYIFSI 316 (337)
Q Consensus 298 ~~l~~~~~--dg~~~~~~~~~ 316 (337)
+++++.+. ++.|.++++.+
T Consensus 326 ~~l~va~~~~~~~VsVID~~t 346 (368)
T 1mda_H 326 ASDNYANSAGTEVLDIYDAAS 346 (368)
T ss_dssp SCEEEEEETTTTEEEEEESSS
T ss_pred CEEEEEccCCCCeEEEEECCC
Confidence 76666655 89999987643
No 242
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.59 E-value=1.1e-05 Score=77.33 Aligned_cols=186 Identities=8% Similarity=0.036 Sum_probs=107.4
Q ss_pred EEEEEcC-C-ceEEEeC-CCCcEEEEEeeCCEE-----------EEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 21 GFALSTK-D-GFKIFDS-STGRLCYERAVGAFS-----------IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 21 ~la~g~~-~-g~~vw~~-~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
.+.+++. + .+.-+|. .+|+++......... .......... ++++. .|+.|..+|.++|+
T Consensus 64 ~vyv~~~~~~~v~AlD~~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-v~v~~------~dg~l~alD~~tG~ 136 (571)
T 2ad6_A 64 MMYVHSAFPNNTYALNLNDPGKIVWQHKPKQDASTKAVMCCDVVDRGLAYGAGQ-IVKKQ------ANGHLLALDAKTGK 136 (571)
T ss_dssp EEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCTTCSCCCCCEEETTE-EEEEC------TTSEEEEEETTTCC
T ss_pred EEEEEeCCCCEEEEEeCCCCccEEEEEcCCCCccccccccccccccccEEECCE-EEEEe------CCCEEEEEECCCCC
Confidence 4445554 4 4788999 899988776432100 0001112233 34443 38899999999999
Q ss_pred EEEEEEcCC-----cee-EEEEcCCeEEEEE-------CCeEEEEECCCCeeeeeecCCCCCc-----------------
Q 019672 87 ALRELNFLT-----SIL-AVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLK----------------- 136 (337)
Q Consensus 87 ~~~~~~~~~-----~v~-~i~~~~~~~~v~~-------d~~i~i~d~~~~~~~~~~~~~~~~~----------------- 136 (337)
.+-+..... .+. .-.+..+.+++.. ++.|+.+|..+++.+.++.......
T Consensus 137 ~~W~~~~~~~~~~~~~~~~P~v~~g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~ 216 (571)
T 2ad6_A 137 INWEVEVCDPKVGSTLTQAPFVAKDTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQ 216 (571)
T ss_dssp EEEEEECCCGGGTCBCCSCCEEETTEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCC
T ss_pred EEEEecCCCCCccceeccCCEEECCEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccc
Confidence 988776433 221 1122355666654 4799999999999887765432110
Q ss_pred ----------------e--E-EEEeeCCCccEEEEcCCC----------C----ccEEEEEEccCCccccc---------
Q 019672 137 ----------------G--L-CAFSPSLNACFLAVPAST----------T----KGSVLVYNVMELHSHCE--------- 174 (337)
Q Consensus 137 ----------------~--~-~~~~~~~~~~~la~~~~~----------~----dg~v~i~d~~~~~~~~~--------- 174 (337)
+ . ..++.+++...+..+... . .+.|..+|..+++..-.
T Consensus 217 ~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~ 296 (571)
T 2ad6_A 217 FGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEW 296 (571)
T ss_dssp SSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSS
T ss_pred cccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCccc
Confidence 0 0 012223333333333210 0 13688889888775421
Q ss_pred ------CceEEEEeCCCCC---EEEEEeCCCcEEEEEEcCCCceeEeecc
Q 019672 175 ------APLAAIVLSSNGM---YIATASEQGTIIRVFLVSEATKSYSFRR 215 (337)
Q Consensus 175 ------~~i~~~~~s~dg~---~lat~s~dg~~i~vwd~~~~~~~~~~~~ 215 (337)
.++ -+...++|+ .++.++.+|. +.++|..+|+.+..++.
T Consensus 297 d~~~~~~p~-l~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~~w~~~~ 344 (571)
T 2ad6_A 297 DFAGVNQMV-LTDQPVNGKMTPLLSHIDRNGI-LYTLNRENGNLIVAEKV 344 (571)
T ss_dssp CCCCCCCCE-EEEEEETTEEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred ccccCCCCE-EEecccCCcEEEEEEEeCCCcE-EEEEECCCCCEEeeecc
Confidence 112 122234774 5778888987 58999999998877643
No 243
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.59 E-value=5.2e-06 Score=78.58 Aligned_cols=172 Identities=9% Similarity=-0.032 Sum_probs=119.8
Q ss_pred CCceEEEEECCCCCEEEEEEc--CCceeEEEE----cCCeEEEEE-------------------CCeEEEEECCCCeeee
Q 019672 73 SPRRLCLFNTTTGTALRELNF--LTSILAVRL----NKKRLVIVL-------------------REKTYIYDANTLAILD 127 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~--~~~v~~i~~----~~~~~~v~~-------------------d~~i~i~d~~~~~~~~ 127 (337)
.+++|.+-|+.+.+....++. ......+.+ +..+++++. ++.+.+.|..+++...
T Consensus 110 ~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~ 189 (595)
T 1fwx_A 110 ANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAW 189 (595)
T ss_dssp TTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEE
T ss_pred CCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEE
Confidence 577899999999998775544 346777776 235566663 2479999999999999
Q ss_pred eecCCCCCceEEEEeeCCCccEEEEcCCCC------------------------------------ccEEEEEEccC--C
Q 019672 128 TIDTVPNLKGLCAFSPSLNACFLAVPASTT------------------------------------KGSVLVYNVME--L 169 (337)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~la~~~~~~------------------------------------dg~v~i~d~~~--~ 169 (337)
++....++.++ ++ ++++.+++++.... -+.|.|.|..+ +
T Consensus 190 qI~Vgg~pd~~-~~--spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~ 266 (595)
T 1fwx_A 190 QVLVSGNLDNC-DA--DYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEAS 266 (595)
T ss_dssp EEEESSCCCCE-EE--CSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGC
T ss_pred EEEeCCCccce-EE--CCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCC
Confidence 98765565554 33 44566666554321 12477788776 3
Q ss_pred cc-ccc----CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc------------eeEeeccCCcceeEEEEEeecCCC
Q 019672 170 HS-HCE----APLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT------------KSYSFRRGTYPSTIFSLSFGQSMQ 232 (337)
Q Consensus 170 ~~-~~~----~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~------------~~~~~~~~~~~~~i~~l~fs~dg~ 232 (337)
+. ... ....++.++|||++++.++.....+.++|+.+.+ ...+...|. ....++|+|||.
T Consensus 267 ~~~~~~Ipvg~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~---gP~h~aF~~dG~ 343 (595)
T 1fwx_A 267 SLFTRYIPIANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL---GPLHTAFDGRGN 343 (595)
T ss_dssp CSSEEEEEEESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS---CEEEEEECTTSE
T ss_pred ceeEEEEecCCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC---CcceEEECCCCe
Confidence 32 111 4567899999999888877544446899998653 233443332 256789999997
Q ss_pred cccEEEEEeCCCcEEEEecCC
Q 019672 233 FQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 233 ~~~~las~s~dg~v~iw~l~~ 253 (337)
.+.+.-.|+.|-+||+++
T Consensus 344 ---aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 344 ---AYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp ---EEEEETTTTEEEEEEHHH
T ss_pred ---EEEEEecCCcEEEEEhhH
Confidence 888889999999999976
No 244
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.59 E-value=2.1e-06 Score=75.62 Aligned_cols=212 Identities=11% Similarity=0.038 Sum_probs=127.0
Q ss_pred CCEEEEEc-CCceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCC-c
Q 019672 19 NSGFALST-KDGFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT-S 96 (337)
Q Consensus 19 g~~la~g~-~~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~-~ 96 (337)
+..+.+|+ ++++..||.. ++..............+..+.+..++++. .++.|..+|.. ++.+..+.... .
T Consensus 107 ~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt------~~~~l~~~d~~-g~~~~~~~~~~~~ 178 (330)
T 3hxj_A 107 EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGS------NDNYLYAINPD-GTEKWRFKTNDAI 178 (330)
T ss_dssp TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEEC------TTSEEEEECTT-SCEEEEEECSSCC
T ss_pred CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEc------CCCEEEEECCC-CCEeEEEecCCCc
Confidence 34456666 4568899988 77665544322111111122222233443 36899999998 88777776544 4
Q ss_pred eeEEEEc-CCeEEEEECCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccccc-
Q 019672 97 ILAVRLN-KKRLVIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHCE- 174 (337)
Q Consensus 97 v~~i~~~-~~~~~v~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~~- 174 (337)
+.++..+ ...+.+++ +.+..+| .+++.+..+..... .+.++..++++.+.+... ++.|..+|.. ++....
T Consensus 179 ~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~~~~~~--~~~~~~~~~~g~l~v~t~---~~gl~~~~~~-g~~~~~~ 250 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNFYAGYW--TVTRPAISEDGTIYVTSL---DGHLYAINPD-GTEKWRF 250 (330)
T ss_dssp CSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEECCSSC--CCSCCEECTTSCEEEEET---TTEEEEECTT-SCEEEEE
T ss_pred eeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEEccCCc--ceeceEECCCCeEEEEcC---CCeEEEECCC-CCEeEEe
Confidence 5556664 45566777 9999999 77776666554322 233444455555544332 5667777743 332211
Q ss_pred ----CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEe
Q 019672 175 ----APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFS 250 (337)
Q Consensus 175 ----~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~ 250 (337)
..+.++.+.++|+ |..++.+|. +..+|. +++.+..+... ...+.++...++|+ |..++.+|.+++..
T Consensus 251 ~~~~~~~~~~~~~~~g~-l~v~t~~gg-l~~~d~-~g~~~~~~~~~--~~~~~~~~~d~~g~----l~~gt~~G~~~~~~ 321 (330)
T 3hxj_A 251 KTGKRIESSPVIGNTDT-IYFGSYDGH-LYAINP-DGTEKWNFETG--SWIIATPVIDENGT----IYFGTRNGKFYALF 321 (330)
T ss_dssp ECSSCCCSCCEECTTSC-EEEECTTCE-EEEECT-TSCEEEEEECS--SCCCSCCEECTTCC----EEEECTTSCEEEEE
T ss_pred eCCCCccccceEcCCCe-EEEecCCCC-EEEECC-CCcEEEEEEcC--CccccceEEcCCCE----EEEEcCCCeEEEEe
Confidence 2344566777775 556777776 468895 77777666432 23466777878886 77799999999988
Q ss_pred cCCCc
Q 019672 251 PGFAI 255 (337)
Q Consensus 251 l~~~~ 255 (337)
.+...
T Consensus 322 ~~~~~ 326 (330)
T 3hxj_A 322 NLEHH 326 (330)
T ss_dssp C----
T ss_pred ccccc
Confidence 66543
No 245
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=98.58 E-value=5.5e-06 Score=79.41 Aligned_cols=227 Identities=11% Similarity=0.072 Sum_probs=134.9
Q ss_pred CCEEEEEcCCc-eEEEeCCCCcEEEEEeeCC----EEEE-E-EccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEE
Q 019672 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVGA----FSIV-E-MLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALREL 91 (337)
Q Consensus 19 g~~la~g~~~g-~~vw~~~~~~~~~~~~~~~----~~~~-~-~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~ 91 (337)
+..+.+++.++ +..+|..+|+++....... ..+. . .. ..+.+ +++........++.|..+|.++|+.+-++
T Consensus 115 ~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~~~~~~~P~v-~~g~v-~vg~~~~~~~~~g~v~a~D~~tG~~~W~~ 192 (571)
T 2ad6_A 115 AGQIVKKQANGHLLALDAKTGKINWEVEVCDPKVGSTLTQAPFV-AKDTV-LMGCSGAELGVRGAVNAFDLKTGELKWRA 192 (571)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEE-ETTEE-EEECBCGGGTCCCEEEEEETTTCCEEEEE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEEEecCCCCCccceeccCCEE-ECCEE-EEEecCCccCCCCEEEEEECCCCcEEEEE
Confidence 44666676555 6899999999887654321 0100 0 01 12333 33331000002689999999999998877
Q ss_pred EcCCce---------------------------------------eEEEEcC--CeEEEEEC-----------------C
Q 019672 92 NFLTSI---------------------------------------LAVRLNK--KRLVIVLR-----------------E 113 (337)
Q Consensus 92 ~~~~~v---------------------------------------~~i~~~~--~~~~v~~d-----------------~ 113 (337)
....+. ..+.+++ +.+++... +
T Consensus 193 ~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~ 272 (571)
T 2ad6_A 193 FATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWYAYDPKLNLFYYGSGNPAPWNETMRPGDNKWTM 272 (571)
T ss_dssp ESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTTT
T ss_pred ccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeEEEcCCCCeEEEECCCCccccCCccCCCceeEE
Confidence 653321 1133433 34444442 2
Q ss_pred eEEEEECCCCeeeeeecCCCCC-------ceEEEEeeCCCc---cEEEEcCCCCccEEEEEEccCCccccc---C-----
Q 019672 114 KTYIYDANTLAILDTIDTVPNL-------KGLCAFSPSLNA---CFLAVPASTTKGSVLVYNVMELHSHCE---A----- 175 (337)
Q Consensus 114 ~i~i~d~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~---~~la~~~~~~dg~v~i~d~~~~~~~~~---~----- 175 (337)
.|..+|..+++.+..++...+. .....+....++ ..++.+. .+|.+.++|..+++.+.. .
T Consensus 273 ~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~~w~~~~~~~~~w 350 (571)
T 2ad6_A 273 TIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMTPLLSHID--RNGILYTLNRENGNLIVAEKVDPAVNV 350 (571)
T ss_dssp EEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSTTCCS
T ss_pred EEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEEEEEEEeC--CCcEEEEEECCCCCEEeeecccCCccc
Confidence 5999999999988777643211 111111211234 2455555 489999999988875421 1
Q ss_pred ----------ce--------------------------EEEEeCCCCCEEEEEeC-------------------------
Q 019672 176 ----------PL--------------------------AAIVLSSNGMYIATASE------------------------- 194 (337)
Q Consensus 176 ----------~i--------------------------~~~~~s~dg~~lat~s~------------------------- 194 (337)
++ ..++++|+..++...+.
T Consensus 351 ~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~ 430 (571)
T 2ad6_A 351 FKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLA 430 (571)
T ss_dssp EEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEE
T ss_pred cccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCCCCEEEEEchhccccccccccccccCCccccccce
Confidence 11 24678888777766542
Q ss_pred ------------CCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 195 ------------QGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 195 ------------dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
+|. +..||+.+|+.+.++..+. .+.+..+...+. .+..++.||.|+.||.++++.
T Consensus 431 ~~~~~~~~~~~~~g~-l~a~D~~tG~~~W~~~~~~---~~~~~~~~t~gg---~v~~g~~dg~l~a~D~~tG~~ 497 (571)
T 2ad6_A 431 MYPGPNGPTKKEMGQ-IRAFDLTTGKAKWTKWEKF---AAWGGTLYTKGG---LVWYATLDGYLKALDNKDGKE 497 (571)
T ss_dssp EEECTTSTTSCCCEE-EEEECTTTCCEEEEEEESS---CCCSBCEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred eccCccccCCCCCCe-EEEEECCCCCEEEEecCCC---CccceeEEECCC---EEEEEcCCCeEEEEECCCCCE
Confidence 355 5799999999888775332 122222333455 788899999999999987764
No 246
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.55 E-value=3.2e-05 Score=67.67 Aligned_cols=185 Identities=10% Similarity=-0.011 Sum_probs=108.6
Q ss_pred EEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEEcCCe-EEEEE--CCeEEEEECCCCeeeee
Q 019672 52 VEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR-LVIVL--REKTYIYDANTLAILDT 128 (337)
Q Consensus 52 ~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~--d~~i~i~d~~~~~~~~~ 128 (337)
..+..+.+.+++++. .++.|..|+. +++..........+..+.+++++ ++++. ++.|.+|+.. ++....
T Consensus 50 p~~~~~g~~l~~~d~------~~~~i~~~~~-~g~~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~~~~~ 121 (305)
T 3dr2_A 50 PAWWEAQRTLVWSDL------VGRRVLGWRE-DGTVDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQAHLL 121 (305)
T ss_dssp EEEEGGGTEEEEEET------TTTEEEEEET-TSCEEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEE
T ss_pred CeEeCCCCEEEEEEC------CCCEEEEEeC-CCCEEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CCEEEE
Confidence 445556676666654 4789999998 45533222334567889998765 44454 3589999985 443221
Q ss_pred ecCCCCC--ceEEEEeeCCCccEEEEc----CC-----------CCccEEEEEEccCCccc---ccCceEEEEeCCCCCE
Q 019672 129 IDTVPNL--KGLCAFSPSLNACFLAVP----AS-----------TTKGSVLVYNVMELHSH---CEAPLAAIVLSSNGMY 188 (337)
Q Consensus 129 ~~~~~~~--~~~~~~~~~~~~~~la~~----~~-----------~~dg~v~i~d~~~~~~~---~~~~i~~~~~s~dg~~ 188 (337)
....... .....+..++++.+.++- .. ...+.|..+|..+++.. .....+.++|+|||+.
T Consensus 122 ~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~p~gl~~spdg~~ 201 (305)
T 3dr2_A 122 VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMADLDHPNGLAFSPDEQT 201 (305)
T ss_dssp ECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEEEESSEEEEEECTTSSE
T ss_pred EeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEecCCCCcceEEcCCCCE
Confidence 1111110 112235566777777652 10 01256778887655432 1245688999999998
Q ss_pred EEEEeCC------CcEEEEEEcCCCceeE---eeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 189 IATASEQ------GTIIRVFLVSEATKSY---SFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 189 lat~s~d------g~~i~vwd~~~~~~~~---~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
|..+... +. |++|++..+. +. .+... .......++++++|+ +.++. .+ .|++|+.+
T Consensus 202 lyv~~~~~~~~~~~~-i~~~~~~~~~-l~~~~~~~~~-~~~~pdgi~~d~~G~---lwv~~-~~-gv~~~~~~ 266 (305)
T 3dr2_A 202 LYVSQTPEQGHGSVE-ITAFAWRDGA-LHDRRHFASV-PDGLPDGFCVDRGGW---LWSSS-GT-GVCVFDSD 266 (305)
T ss_dssp EEEEECCC---CCCE-EEEEEEETTE-EEEEEEEECC-SSSCCCSEEECTTSC---EEECC-SS-EEEEECTT
T ss_pred EEEEecCCcCCCCCE-EEEEEecCCC-ccCCeEEEEC-CCCCCCeEEECCCCC---EEEec-CC-cEEEECCC
Confidence 8777665 44 6899987654 21 11110 112245688999998 55544 44 49999864
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.51 E-value=1.7e-05 Score=66.74 Aligned_cols=162 Identities=13% Similarity=0.075 Sum_probs=110.4
Q ss_pred CEEEEEEcCC--ceeEEEEcCCeEEEEE----CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCcc
Q 019672 86 TALRELNFLT--SILAVRLNKKRLVIVL----REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG 159 (337)
Q Consensus 86 ~~~~~~~~~~--~v~~i~~~~~~~~v~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg 159 (337)
+.+.++.|.. -...+.|+++.++.++ .+.|+.+|+.+++.+..+..+....+ ..+...++.-+.++ - .++
T Consensus 10 ~v~~~~phd~~~ftqGL~~~~~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fg-eGi~~~~~~ly~lt-w--~~~ 85 (243)
T 3mbr_X 10 RVVKRYPHDTTAFTEGLFYLRGHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFG-AGIVAWRDRLIQLT-W--RNH 85 (243)
T ss_dssp EEEEEEECCTTCCEEEEEEETTEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCE-EEEEEETTEEEEEE-S--SSS
T ss_pred EEEEEcCCCCccccccEEEECCEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcce-eEEEEeCCEEEEEE-e--eCC
Confidence 3566777765 3568999998888887 24899999999999998876554433 23444444434433 3 479
Q ss_pred EEEEEEccCCccccc--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcce---eEEEEEeecCCCcc
Q 019672 160 SVLVYNVMELHSHCE--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPS---TIFSLSFGQSMQFQ 234 (337)
Q Consensus 160 ~v~i~d~~~~~~~~~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~---~i~~l~fs~dg~~~ 234 (337)
.+.+||..+.+...+ .+-....+.+||+.|..+..+++ |.++|..+.+.+.++.-+.+.. .++-|.+. +|+
T Consensus 86 ~v~v~D~~tl~~~~ti~~~~~Gwglt~dg~~L~vSdgs~~-l~~iDp~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~-- 161 (243)
T 3mbr_X 86 EGFVYDLATLTPRARFRYPGEGWALTSDDSHLYMSDGTAV-IRKLDPDTLQQVGSIKVTAGGRPLDNLNELEWV-NGE-- 161 (243)
T ss_dssp EEEEEETTTTEEEEEEECSSCCCEEEECSSCEEEECSSSE-EEEECTTTCCEEEEEECEETTEECCCEEEEEEE-TTE--
T ss_pred EEEEEECCcCcEEEEEeCCCCceEEeeCCCEEEEECCCCe-EEEEeCCCCeEEEEEEEccCCcccccceeeEEe-CCE--
Confidence 999999999886644 11122333456777776666666 6899999999887775432222 35666765 776
Q ss_pred cEEEEEeCCCcEEEEecCCCcc
Q 019672 235 DILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 235 ~~las~s~dg~v~iw~l~~~~~ 256 (337)
.++..-.+..|.+.|.++++-
T Consensus 162 -lyanvw~s~~I~vIDp~tG~V 182 (243)
T 3mbr_X 162 -LLANVWLTSRIARIDPASGKV 182 (243)
T ss_dssp -EEEEETTTTEEEEECTTTCBE
T ss_pred -EEEEECCCCeEEEEECCCCCE
Confidence 666665778999999887653
No 248
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.51 E-value=0.00037 Score=59.44 Aligned_cols=223 Identities=4% Similarity=-0.059 Sum_probs=124.6
Q ss_pred CCEEEEEcCCceEEEeCCCCcE-------EEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEE
Q 019672 19 NSGFALSTKDGFKIFDSSTGRL-------CYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALREL 91 (337)
Q Consensus 19 g~~la~g~~~g~~vw~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~ 91 (337)
|.+|..+..+.++.++++.... +..........+.+.+..+.+.++.. ..+.|..+|+..+.....+
T Consensus 1 ~~~l~~~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~------~~~~I~~~~~~g~~~~~~~ 74 (267)
T 1npe_A 1 GTHLLFAQTGKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDI------SEPSIGRASLHGGEPTTII 74 (267)
T ss_dssp CEEEEEEEEEEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEET------TTTEEEEEESSSCCCEEEE
T ss_pred CcEEEEEcCCeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEEC------CCCEEEEEecCCCCcEEEE
Confidence 3455555555677778765432 12211122334455555556655554 3789999999766543333
Q ss_pred EcC-CceeEEEEcC--CeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC-CccEEEEEE
Q 019672 92 NFL-TSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST-TKGSVLVYN 165 (337)
Q Consensus 92 ~~~-~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~dg~v~i~d 165 (337)
... .....+++++ +.++++. .+.|.++++........+... ......+..++++..+..+... ..+.|..++
T Consensus 75 ~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~--~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 75 RQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQRRVLFDTG--LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSS--CSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred ECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCEEEEEECC--CCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 222 3567888875 4566665 568999998643222122211 1123344555543344333321 146888888
Q ss_pred ccCCcc--cc---cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEE
Q 019672 166 VMELHS--HC---EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT 240 (337)
Q Consensus 166 ~~~~~~--~~---~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~ 240 (337)
+..... .. ....+.++++|++.+|..+......|.++|.........+.... ....|+.. ++. .+++.
T Consensus 153 ~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~---~P~gi~~d-~~~---lyva~ 225 (267)
T 1npe_A 153 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQ---YPFAVTSY-GKN---LYYTD 225 (267)
T ss_dssp TTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCC---SEEEEEEE-TTE---EEEEE
T ss_pred cCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCC---CceEEEEe-CCE---EEEEE
Confidence 753321 11 14578999999887776666544447899987544332222211 23456654 343 55555
Q ss_pred eCCCcEEEEecCCCcc
Q 019672 241 SSSGSLHVFSPGFAIN 256 (337)
Q Consensus 241 s~dg~v~iw~l~~~~~ 256 (337)
...+.|.++|..+++.
T Consensus 226 ~~~~~v~~~d~~~g~~ 241 (267)
T 1npe_A 226 WKTNSVIAMDLAISKE 241 (267)
T ss_dssp TTTTEEEEEETTTTEE
T ss_pred CCCCeEEEEeCCCCCc
Confidence 5668999999876543
No 249
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.46 E-value=2.9e-05 Score=73.50 Aligned_cols=231 Identities=9% Similarity=0.010 Sum_probs=141.1
Q ss_pred CCCCEEEEEcCCc--eEEEeCCCCcEEE--EEe-eCCEEEEEE-c-cCCCEEEEEeCCCC-----------CCCCCceEE
Q 019672 17 QDNSGFALSTKDG--FKIFDSSTGRLCY--ERA-VGAFSIVEM-L-YSSSLLAIVGAGEQ-----------PSLSPRRLC 78 (337)
Q Consensus 17 ~dg~~la~g~~~g--~~vw~~~~~~~~~--~~~-~~~~~~~~~-~-~~~~~~~~~~~g~~-----------~~~~d~~v~ 78 (337)
+||+++.+...+. +.+.|+++++... +.. ..+...+.+ . ++..++...+-... +...++.+.
T Consensus 99 ~DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vt 178 (595)
T 1fwx_A 99 YDGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFT 178 (595)
T ss_dssp EEEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEE
T ss_pred cCCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEE
Confidence 5999987766543 7899999998654 332 233334444 3 55666544421100 012356899
Q ss_pred EEECCCCCEEEEEEcCCceeEEEEcCC--eEEEEE--C-------------------------------------CeEEE
Q 019672 79 LFNTTTGTALRELNFLTSILAVRLNKK--RLVIVL--R-------------------------------------EKTYI 117 (337)
Q Consensus 79 iwd~~~~~~~~~~~~~~~v~~i~~~~~--~~~v~~--d-------------------------------------~~i~i 117 (337)
+.|.++.+.+.++.....--.+.++++ .++++. . +.|.|
T Consensus 179 vID~~t~~v~~qI~Vgg~pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~V 258 (595)
T 1fwx_A 179 AVDADKWEVAWQVLVSGNLDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKV 258 (595)
T ss_dssp EEETTTTEEEEEEEESSCCCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEE
T ss_pred EEECCCCeEEEEEEeCCCccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEE
Confidence 999999988888876444444445433 233332 1 23677
Q ss_pred EECCC--Cee-eeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc------------ccc----CceE
Q 019672 118 YDANT--LAI-LDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS------------HCE----APLA 178 (337)
Q Consensus 118 ~d~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~------------~~~----~~i~ 178 (337)
.|..+ ++. +..+....++.++ ..+||+.++++++. .+.+|.++|+.+.+. ..+ ....
T Consensus 259 ID~~~~~~~~~~~~Ipvg~~PhGv---~~sPDGk~v~V~~~-~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~ 334 (595)
T 1fwx_A 259 VDGRKEASSLFTRYIPIANNPHGC---NMAPDKKHLCVAGK-LSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPL 334 (595)
T ss_dssp EECSGGGCCSSEEEEEEESSCCCE---EECTTSSEEEEECT-TSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEE
T ss_pred EeCcccCCceeEEEEecCCCceEE---EEcCCCCEEEEeCC-CCCeEEEEECcccccccccccCcccceEEEcCCCCCcc
Confidence 77766 434 4555444444443 56788888888876 689999999996631 111 5678
Q ss_pred EEEeCCCCCEEEEEeCCCcEEEEEEcCC----------CceeEeeccCCcceeEE---EEEeecCCCcccEEEEEeCC--
Q 019672 179 AIVLSSNGMYIATASEQGTIIRVFLVSE----------ATKSYSFRRGTYPSTIF---SLSFGQSMQFQDILVATSSS-- 243 (337)
Q Consensus 179 ~~~~s~dg~~lat~s~dg~~i~vwd~~~----------~~~~~~~~~~~~~~~i~---~l~fs~dg~~~~~las~s~d-- 243 (337)
.++|+|||...++.-.|++ |-+||+.+ .+.+.++..+..+.... .+.++|||+ +|.++..-
T Consensus 335 h~aF~~dG~aY~t~~ldsq-V~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk---~l~~~Nk~sk 410 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQ-VVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATND---WLVCLSKFSK 410 (595)
T ss_dssp EEEECTTSEEEEEETTTTE-EEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSS---EEEEEESCCT
T ss_pred eEEECCCCeEEEEEecCCc-EEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCC---EEEEcCCCCc
Confidence 9999999943344445666 57899987 45666665443222221 235689999 88777432
Q ss_pred CcE-----------EEEecCCCc
Q 019672 244 GSL-----------HVFSPGFAI 255 (337)
Q Consensus 244 g~v-----------~iw~l~~~~ 255 (337)
..+ .++|+..++
T Consensus 411 dr~~~~gp~~~~~~ql~dis~~~ 433 (595)
T 1fwx_A 411 DRFLNVGPLKPENDQLIDISGDK 433 (595)
T ss_dssp TSSCCCCSSCCEEEEEEECSSSS
T ss_pred cccccCCCCCCCcceEEEcCCCc
Confidence 233 889986543
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.45 E-value=0.00014 Score=64.05 Aligned_cols=226 Identities=14% Similarity=0.109 Sum_probs=126.6
Q ss_pred eEEEEEcCCCCEEEEEcCC-ceEEEeCCCCcEE-EEEe--------------------eCCEEEEEEccCCCEEEEEeCC
Q 019672 10 VFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLC-YERA--------------------VGAFSIVEMLYSSSLLAIVGAG 67 (337)
Q Consensus 10 v~~~~fs~dg~~la~g~~~-g~~vw~~~~~~~~-~~~~--------------------~~~~~~~~~~~~~~~~~~~~~g 67 (337)
-.+++|+++|+++.++..+ ++..|+..+++.. +... ......+.+......+.++..
T Consensus 21 p~~i~~d~~g~~l~v~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~- 99 (322)
T 2fp8_A 21 PNSFTFDSTNKGFYTSVQDGRVIKYEGPNSGFVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDC- 99 (322)
T ss_dssp CCCEECCTTCSSEEEECTTSEEEEECCTTTCEEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEET-
T ss_pred ceEEEEcCCCCEEEEEcCCCeEEEECCCCCceEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEEC-
Confidence 3467889999866666654 5788888766543 2210 012223333332334444333
Q ss_pred CCCCCCCceEEEEECCCCCEEEEEE--cC----CceeEEEEcC-Ce-EEEEE-C------------------CeEEEEEC
Q 019672 68 EQPSLSPRRLCLFNTTTGTALRELN--FL----TSILAVRLNK-KR-LVIVL-R------------------EKTYIYDA 120 (337)
Q Consensus 68 ~~~~~~d~~v~iwd~~~~~~~~~~~--~~----~~v~~i~~~~-~~-~~v~~-d------------------~~i~i~d~ 120 (337)
.+.|..+|..+++. ..+. .. ....++.+++ ++ ++++. . +.|..||.
T Consensus 100 ------~~~i~~~d~~~g~~-~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~ 172 (322)
T 2fp8_A 100 ------YYHLSVVGSEGGHA-TQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDP 172 (322)
T ss_dssp ------TTEEEEECTTCEEC-EEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEET
T ss_pred ------CCCEEEEeCCCCEE-EEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeC
Confidence 34588888775532 2221 11 2357788887 54 55543 1 46888887
Q ss_pred CCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc-----cc--cCceEEEEeCCCCCEEEEEe
Q 019672 121 NTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS-----HC--EAPLAAIVLSSNGMYIATAS 193 (337)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~-----~~--~~~i~~~~~s~dg~~lat~s 193 (337)
.+++..........+. .++.++++..|.++.. ..+.|.+||+..... .. .+ ...++++++|++.++..
T Consensus 173 ~~~~~~~~~~~~~~p~---gia~~~dg~~lyv~d~-~~~~I~~~~~~~~~~~~~~~~~~~~g-P~gi~~d~~G~l~va~~ 247 (322)
T 2fp8_A 173 STKETTLLLKELHVPG---GAEVSADSSFVLVAEF-LSHQIVKYWLEGPKKGTAEVLVKIPN-PGNIKRNADGHFWVSSS 247 (322)
T ss_dssp TTTEEEEEEEEESCCC---EEEECTTSSEEEEEEG-GGTEEEEEESSSTTTTCEEEEEECSS-EEEEEECTTSCEEEEEE
T ss_pred CCCEEEEeccCCccCc---ceEECCCCCEEEEEeC-CCCeEEEEECCCCcCCccceEEeCCC-CCCeEECCCCCEEEEec
Confidence 7665432221111222 3455666665554432 368899999874321 11 13 67899999999777654
Q ss_pred C----------CCcEEEEEEcCCCceeEeeccCCc--ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 194 E----------QGTIIRVFLVSEATKSYSFRRGTY--PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 194 ~----------dg~~i~vwd~~~~~~~~~~~~~~~--~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
. .+. |..+|. +|+.+..+..... ...+.++++ .+++ ++++....+.|.+++++..
T Consensus 248 ~~~~~~~~~~~~~~-v~~~d~-~G~~~~~~~~~~g~~~~~~~~~~~-~~g~---L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 248 EELDGNMHGRVDPK-GIKFDE-FGNILEVIPLPPPFAGEHFEQIQE-HDGL---LYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp EETTSSTTSCEEEE-EEEECT-TSCEEEEEECCTTTTTSCCCEEEE-ETTE---EEEECSSCSEEEEEEC---
T ss_pred CcccccccCCCccE-EEEECC-CCCEEEEEECCCCCccccceEEEE-eCCE---EEEeecCCCceEEEecccc
Confidence 4 344 457776 4777666643211 123566666 4676 6666667788999998643
No 251
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.44 E-value=4.4e-05 Score=73.33 Aligned_cols=187 Identities=8% Similarity=0.038 Sum_probs=109.0
Q ss_pred CEEEEEcC--CceEEEeC-CCCcEEEEEeeCCE-------------EEEEEccCCCE---EEEEeCCCCCCCCCceEEEE
Q 019672 20 SGFALSTK--DGFKIFDS-STGRLCYERAVGAF-------------SIVEMLYSSSL---LAIVGAGEQPSLSPRRLCLF 80 (337)
Q Consensus 20 ~~la~g~~--~g~~vw~~-~~~~~~~~~~~~~~-------------~~~~~~~~~~~---~~~~~~g~~~~~~d~~v~iw 80 (337)
..+.+++. +.+.-+|. .+|+++...+.... .-+.+.+.... .++++. .|+.|..+
T Consensus 63 g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t------~dg~l~Al 136 (599)
T 1w6s_A 63 GKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQ------LDGNVAAL 136 (599)
T ss_dssp TEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEEC------TTSEEEEE
T ss_pred CEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEc------CCCEEEEE
Confidence 34555554 44788999 89998877643210 00111101222 133443 48899999
Q ss_pred ECCCCCEEEEEEcCC-----ceeE-EEEcCCeEEEEE-------CCeEEEEECCCCeeeeeecCCCCCce----------
Q 019672 81 NTTTGTALRELNFLT-----SILA-VRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLKG---------- 137 (337)
Q Consensus 81 d~~~~~~~~~~~~~~-----~v~~-i~~~~~~~~v~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~---------- 137 (337)
|.++|+.+-+..... .+.+ -.+..+.+++.. ++.|+.+|..+++++..+........
T Consensus 137 Da~TG~~~W~~~~~~~~~~~~~~ssP~v~~g~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~ 216 (599)
T 1w6s_A 137 NAETGETVWKVENSDIKVGSTLTIAPYVVKDKVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIK 216 (599)
T ss_dssp ETTTCCEEEEEECCCGGGTCBCCSCCEEETTEEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTT
T ss_pred ECCCCCEEEeecCCCCCccceeecCCEEECCEEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCccccccccccccc
Confidence 999999987765432 2211 122345555544 57999999999998877754322100
Q ss_pred -------------------------E-EEEeeCCCccEEEEcCCCC--------------ccEEEEEEccCCccccc---
Q 019672 138 -------------------------L-CAFSPSLNACFLAVPASTT--------------KGSVLVYNVMELHSHCE--- 174 (337)
Q Consensus 138 -------------------------~-~~~~~~~~~~~la~~~~~~--------------dg~v~i~d~~~~~~~~~--- 174 (337)
+ ...+.+++..++..+.... .+.|..+|..+++..-.
T Consensus 217 ~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~ 296 (599)
T 1w6s_A 217 NPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQK 296 (599)
T ss_dssp CGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEES
T ss_pred cccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEeCCCCceeeEeec
Confidence 0 0112233333444443211 24788899988876421
Q ss_pred ------------CceEEEEeC-CCC---CEEEEEeCCCcEEEEEEcCCCceeEeec
Q 019672 175 ------------APLAAIVLS-SNG---MYIATASEQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 175 ------------~~i~~~~~s-~dg---~~lat~s~dg~~i~vwd~~~~~~~~~~~ 214 (337)
.++. +... .+| +.++.++.+|. +.++|.++|+.+....
T Consensus 297 ~~~d~wd~d~~~~p~l-~d~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~ 350 (599)
T 1w6s_A 297 TPHDEWDYAGVNVMML-SEQKDKDGKARKLLTHPDRNGI-VYTLDRTDGALVSANK 350 (599)
T ss_dssp STTCSSCCCCCCCCEE-EEEECTTSCEEEEEEEECTTSE-EEEEETTTCCEEEEEE
T ss_pred CCCccccccCCCccEE-EeccccCCcEEEEEEEECCCcE-EEEEECCCCCEeeccc
Confidence 1122 2222 578 56778889997 5899999999987664
No 252
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.42 E-value=7.9e-06 Score=72.97 Aligned_cols=155 Identities=10% Similarity=0.090 Sum_probs=93.6
Q ss_pred CceeEEEEcCCe-EEEEE-------CCeEEEEECCCCeeeeeecCCCC----CceEEEEeeCCC-ccEEEEcCC-CCccE
Q 019672 95 TSILAVRLNKKR-LVIVL-------REKTYIYDANTLAILDTIDTVPN----LKGLCAFSPSLN-ACFLAVPAS-TTKGS 160 (337)
Q Consensus 95 ~~v~~i~~~~~~-~~v~~-------d~~i~i~d~~~~~~~~~~~~~~~----~~~~~~~~~~~~-~~~la~~~~-~~dg~ 160 (337)
..+.++.++++. ++++. +.+|.+||+.+++.+..+..+.. ......+..+++ +..+++..+ ..++.
T Consensus 67 ~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~ 146 (343)
T 2qe8_A 67 DTVLGIKSDGNGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAA 146 (343)
T ss_dssp SCEEEEEECSSSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCE
T ss_pred eEeeEEEEcCCCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCe
Confidence 367899998755 55554 26899999999987776653211 111233344443 333333220 02678
Q ss_pred EEEEEccCCccccc----------------------------------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcC-
Q 019672 161 VLVYNVMELHSHCE----------------------------------APLAAIVLSSNGMYIATASEQGTIIRVFLVS- 205 (337)
Q Consensus 161 v~i~d~~~~~~~~~----------------------------------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~- 205 (337)
|.+||+.+++.... ..++.++|+|||+.|..+..++..+..++..
T Consensus 147 i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~~~~ 226 (343)
T 2qe8_A 147 LIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIKSAD 226 (343)
T ss_dssp EEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEEHHH
T ss_pred EEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEEHHH
Confidence 99999875532110 1258899999999999988887633333321
Q ss_pred --CCc-----eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 206 --EAT-----KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 206 --~~~-----~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
.+. ....+....+......++++++|. ++++...++.|.+||.+
T Consensus 227 ~~~~~~~~~~~~~~~~~~g~~g~pdgia~d~~G~---l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 227 LSNLQLTDAELGSKIERYSEKPICDGISIDKDHN---IYVGDLAHSAIGVITSA 277 (343)
T ss_dssp HTCTTCCHHHHHTTCEEEEECCSCSCEEECTTCC---EEEEEGGGTEEEEEETT
T ss_pred hcCCCCChhhhhcceEecccCCCCceEEECCCCC---EEEEccCCCeEEEEECC
Confidence 111 000000000011245689999999 89999999999999973
No 253
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.39 E-value=0.00087 Score=58.49 Aligned_cols=221 Identities=10% Similarity=0.061 Sum_probs=121.1
Q ss_pred CCeEEEEEcCCCCEEEEEcCC-ceEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCC-ceEEEEECCCC
Q 019672 8 YPVFFVSFNQDNSGFALSTKD-GFKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSP-RRLCLFNTTTG 85 (337)
Q Consensus 8 ~~v~~~~fs~dg~~la~g~~~-g~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d-~~v~iwd~~~~ 85 (337)
.....++|+++|+++++...+ .+..||.++..............+.+..+.+++ ++..+ .+ ..|..+|..++
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g~~~~~~~~~~~p~gia~~~dG~l~-vad~~-----~~~~~v~~~d~~~g 105 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDGNQQIHATVEGKVSGLAFTSNGDLV-ATGWN-----ADSIPVVSLVKSDG 105 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTCCEEEEEECSSEEEEEEECTTSCEE-EEEEC-----TTSCEEEEEECTTS
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCCceEEEEeCCCCceeEEEcCCCcEE-EEecc-----CCcceEEEEcCCCC
Confidence 456788999999977766444 468888775432221112223344555555543 33321 12 25777788888
Q ss_pred CEEEEEEcCC--ceeEEEEcCC-eEEEEE--CCeEEEEECCCCee-eeee-------cCCCCCceEEEEeeCCCccEEEE
Q 019672 86 TALRELNFLT--SILAVRLNKK-RLVIVL--REKTYIYDANTLAI-LDTI-------DTVPNLKGLCAFSPSLNACFLAV 152 (337)
Q Consensus 86 ~~~~~~~~~~--~v~~i~~~~~-~~~v~~--d~~i~i~d~~~~~~-~~~~-------~~~~~~~~~~~~~~~~~~~~la~ 152 (337)
+......... ....+...++ .++++. .+.|+++|...++. +... ...........+++ ++..|.+
T Consensus 106 ~~~~~~~~~~~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngis~--dg~~lyv 183 (306)
T 2p4o_A 106 TVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGLKR--FGNFLYV 183 (306)
T ss_dssp CEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEEEE--ETTEEEE
T ss_pred eEEEEEeCCCccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCcCc--CCCEEEE
Confidence 7544333322 2233433333 344444 57899999865421 1100 00111112233444 4444444
Q ss_pred cCCCCccEEEEEEccC-Ccccc-----c-CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCcee--EeeccCCcceeEE
Q 019672 153 PASTTKGSVLVYNVME-LHSHC-----E-APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKS--YSFRRGTYPSTIF 223 (337)
Q Consensus 153 ~~~~~dg~v~i~d~~~-~~~~~-----~-~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~--~~~~~~~~~~~i~ 223 (337)
+.. ..+.|..||+.. +.... . .....++++++|++.++....+. |.++|.. |+.. ..+..+ -....
T Consensus 184 ~d~-~~~~I~~~~~~~~g~~~~~~~~~~~~~P~gi~vd~dG~l~va~~~~~~-V~~~~~~-G~~~~~~~~~~~--~~~p~ 258 (306)
T 2p4o_A 184 SNT-EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNLYGATHIYNS-VVRIAPD-RSTTIIAQAEQG--VIGST 258 (306)
T ss_dssp EET-TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCEEEECBTTCC-EEEECTT-CCEEEEECGGGT--CTTEE
T ss_pred EeC-CCCEEEEEEeCCCCCCCccEEEeccCCCCCeEECCCCCEEEEeCCCCe-EEEECCC-CCEEEEeecccc--cCCce
Confidence 443 478999999874 32111 1 34567899999988777666666 5789875 6552 223221 13478
Q ss_pred EEEee---cCCCcccEEEEEeCCC
Q 019672 224 SLSFG---QSMQFQDILVATSSSG 244 (337)
Q Consensus 224 ~l~fs---~dg~~~~~las~s~dg 244 (337)
+++|. ||++ .|..++..+
T Consensus 259 ~~a~~g~~~d~~---~LyVt~~~~ 279 (306)
T 2p4o_A 259 AVAFGQTEGDCT---AIYVVTNGG 279 (306)
T ss_dssp EEEECCSTTTTT---EEEEEECTT
T ss_pred EEEEecccCCCC---EEEEECCCC
Confidence 99999 8877 666665543
No 254
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.38 E-value=0.00012 Score=70.16 Aligned_cols=189 Identities=14% Similarity=0.051 Sum_probs=106.1
Q ss_pred CCCEEEEEcCCceEEEeCCCCcEEEEEeeCCEE--E-------EEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEE
Q 019672 18 DNSGFALSTKDGFKIFDSSTGRLCYERAVGAFS--I-------VEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTAL 88 (337)
Q Consensus 18 dg~~la~g~~~g~~vw~~~~~~~~~~~~~~~~~--~-------~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~ 88 (337)
++..++++..+++.-+|..+|+++......... . .......+.+.+ +. .|+.|..+|.++|+.+
T Consensus 68 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~g~a~~~~~v~~-~t------~dg~l~AlD~~TG~~~ 140 (582)
T 1flg_A 68 DGVIYVTASYSRLFALDAKTGKRLWTYNHRLPDDIRPCCDVVNRGAAIYGDKVFF-GT------LDASVVALNKNTGKVV 140 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECCCCTTCCCSSCSCCCCCEEETTEEEE-EE------TTTEEEEEESSSCCEE
T ss_pred CCEEEEEcCCCCEEEEECCCCcEEEEEcCCCCcccccccccCCCccEEECCEEEE-Ee------CCCEEEEEECCCCCEE
Confidence 444444444366888899999998776432100 0 000112333333 33 3789999999999998
Q ss_pred EEEEcCC-----cee-EEEEcCC------eEEEEE-------CCeEEEEECCCCeeeeeecCCCCCc-------------
Q 019672 89 RELNFLT-----SIL-AVRLNKK------RLVIVL-------REKTYIYDANTLAILDTIDTVPNLK------------- 136 (337)
Q Consensus 89 ~~~~~~~-----~v~-~i~~~~~------~~~v~~-------d~~i~i~d~~~~~~~~~~~~~~~~~------------- 136 (337)
-+..... .+. .-.+..+ .+++.. ++.|+.+|..+++.+..........
T Consensus 141 W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~~W~~~~~~~~~~p~~~~~~~~~g~ 220 (582)
T 1flg_A 141 WKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEEIWMRPFVEGHMGRLNGKDSTVTGD 220 (582)
T ss_dssp EEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCEEEEEESSTTCEEEETTEEEEESSC
T ss_pred eeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCEEeecCCCccccccccCcccccccc
Confidence 7765432 111 1111223 444433 5789999999998877654321000
Q ss_pred -----------------------e--E-EEEeeCCCccEEEEcCC------------C----------CccEEEEEEccC
Q 019672 137 -----------------------G--L-CAFSPSLNACFLAVPAS------------T----------TKGSVLVYNVME 168 (337)
Q Consensus 137 -----------------------~--~-~~~~~~~~~~~la~~~~------------~----------~dg~v~i~d~~~ 168 (337)
+ . ...+.+++..++.++.. . ..+.|..+|..+
T Consensus 221 ~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~T 300 (582)
T 1flg_A 221 VKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSS 300 (582)
T ss_dssp TTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTT
T ss_pred cccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCC
Confidence 0 0 01122233334333221 0 116788999988
Q ss_pred Cccccc---------------CceEEEEeC-CCCC---EEEEEeCCCcEEEEEEcCCCceeEeecc
Q 019672 169 LHSHCE---------------APLAAIVLS-SNGM---YIATASEQGTIIRVFLVSEATKSYSFRR 215 (337)
Q Consensus 169 ~~~~~~---------------~~i~~~~~s-~dg~---~lat~s~dg~~i~vwd~~~~~~~~~~~~ 215 (337)
++..-. .++. +... .+|+ .++.++.+|. ++++|.++|+.+..+..
T Consensus 301 G~~~W~~q~~~~d~wd~~~~~~p~l-~~~~~~~G~~~~~v~~~~~~G~-l~~lD~~tG~~lw~~~~ 364 (582)
T 1flg_A 301 GEVKWFYQHTPNDAWDFSGNNELVL-FDYKAKDGKIVKATAHADRNGF-FYVVDRSNGKLQNAFPF 364 (582)
T ss_dssp CCEEEEEESSTTCCSCCCCCCCCEE-EEEECSSSCEEEEEEEECTTSE-EEEEETTTCCEEEEEES
T ss_pred CCEEEEEeCCCCCcccccCCCCcEE-EeeecCCCCEEEEEEEECCCce-EEEEECCCCCEeccccc
Confidence 876421 1221 2222 5774 7888999997 58999999999876643
No 255
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.25 E-value=0.0016 Score=64.67 Aligned_cols=226 Identities=12% Similarity=0.121 Sum_probs=137.0
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEe----------eCCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA----------VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
...|.++...++|.+.+....+|+..|+..+++...-.. ...+..+....+.+.+.+.+ .++-
T Consensus 356 ~~~V~~i~~d~~g~lWiGt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt-------~~~G 428 (795)
T 4a2l_A 356 DNVVSCIVEDKDKNLWIGTNDGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGT-------HAGG 428 (795)
T ss_dssp CSSEEEEEECTTSCEEEEESSSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEE-------TTTE
T ss_pred CCeeEEEEECCCCCEEEEECCCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEe-------CcCc
Confidence 456999999999986554444589999988776533211 12233333223333243333 2467
Q ss_pred EEEEECCCCCEEEEEEc------CCceeEEEEcC-CeEEEEECCeEEEEECCCCeeeeeecC----CCCCceEEEEeeCC
Q 019672 77 LCLFNTTTGTALRELNF------LTSILAVRLNK-KRLVIVLREKTYIYDANTLAILDTIDT----VPNLKGLCAFSPSL 145 (337)
Q Consensus 77 v~iwd~~~~~~~~~~~~------~~~v~~i~~~~-~~~~v~~d~~i~i~d~~~~~~~~~~~~----~~~~~~~~~~~~~~ 145 (337)
|..+|.++++.. .+.. ...|.++..++ +.+.+++.+.+.+||..+++....... ......+.++..++
T Consensus 429 l~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~ 507 (795)
T 4a2l_A 429 LSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDS 507 (795)
T ss_dssp EEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECT
T ss_pred eeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCeEEEccccccccccCCceEEEEEECC
Confidence 999999887643 3322 23688888765 457777777899999887654322111 11123466777777
Q ss_pred CccEEEEcCCCCccEEEEEEccCCcc----------cccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeec-
Q 019672 146 NACFLAVPASTTKGSVLVYNVMELHS----------HCEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR- 214 (337)
Q Consensus 146 ~~~~la~~~~~~dg~v~i~d~~~~~~----------~~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~- 214 (337)
++.+.+... +-+..||..+.+. .....|.++..+++|++.++. ..| +..||..+++. ..+.
T Consensus 508 ~g~lWigt~----~Gl~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT-~~G--l~~~d~~~~~~-~~~~~ 579 (795)
T 4a2l_A 508 HKRLWIGGE----EGLSVFKQEGLDIQKASILPVSNVTKLFTNCIYEASNGIIWVGT-REG--FYCFNEKDKQI-KRYNT 579 (795)
T ss_dssp TCCEEEEES----SCEEEEEEETTEEEECCCSCSCGGGGSCEEEEEECTTSCEEEEE-SSC--EEEEETTTTEE-EEECG
T ss_pred CCCEEEEeC----CceEEEeCCCCeEEEecCCCCCCCCCCeeEEEEECCCCCEEEEe-CCC--ceeECCCCCcE-EEeCC
Confidence 776555332 3377788765432 122579999999999866544 346 46899877653 2332
Q ss_pred -cCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 215 -RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 215 -~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
.+.....|.++...++|. +.+++ .. -|..|+.++
T Consensus 580 ~~gl~~~~i~~i~~d~~g~---lWi~t-~~-Gl~~~~~~~ 614 (795)
T 4a2l_A 580 TNGLPNNVVYGILEDSFGR---LWLST-NR-GISCFNPET 614 (795)
T ss_dssp GGTCSCSCEEEEEECTTSC---EEEEE-TT-EEEEEETTT
T ss_pred CCCCchhheEEEEECCCCC---EEEEc-CC-ceEEEcCCC
Confidence 222233589999999998 55444 44 466777654
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=98.24 E-value=0.001 Score=66.18 Aligned_cols=229 Identities=12% Similarity=0.112 Sum_probs=139.0
Q ss_pred eEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEE
Q 019672 10 VFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTAL 88 (337)
Q Consensus 10 v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~ 88 (337)
|.++...++|.+.+....+|+..|+..+++...... .....+..+..+.+..+.++. .++-|.+||..+++..
T Consensus 175 i~~i~~d~~g~lwigt~~~Gl~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lwigt------~~~Gl~~~~~~~~~~~ 248 (795)
T 4a2l_A 175 IASTLYRQGDQIYIGTSTDGLYTYSITQKTFEKVIPILGTKQIQAILQQSPTRIWVAT------EGAGLFLINPKTKEIK 248 (795)
T ss_dssp CEEEEEEETTEEEEEESSSCEEEEETTTCCEEECC----CCCEEEEEEEETTEEEEEE------BSSCEEEEETTTTEEE
T ss_pred eEEEEECCCCCEEEEECCCCEEEEeCCCCeEEEecCCCCCCeeEEEEEcCCCCEEEEE------CCCCeEEEeCCCCeEE
Confidence 888888888876654434689999987765432211 111112233333322233332 1346899998876533
Q ss_pred EEEEc---------CCceeEEEEcC-CeEEEEECCeEEEEECCCCeeeeeecCC-----CCCceEEEEeeCCCccEEEEc
Q 019672 89 RELNF---------LTSILAVRLNK-KRLVIVLREKTYIYDANTLAILDTIDTV-----PNLKGLCAFSPSLNACFLAVP 153 (337)
Q Consensus 89 ~~~~~---------~~~v~~i~~~~-~~~~v~~d~~i~i~d~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~la~~ 153 (337)
.+.. ...|.++..++ ..+.+++++-+.+||..+.+........ -....+.++..++++.+-+..
T Consensus 249 -~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt 327 (795)
T 4a2l_A 249 -NYLHSPSNPKSISSNYIRSLAMDSQNRLWIGTFNDLNIYHEGTDSFASYSSNPVENGSLSQRSVRSIFMDSQGGMWLGT 327 (795)
T ss_dssp -EECCCTTCTTSCSCSBEEEEEECTTSCEEEEESSCEEEEETTTTEEEEECCCTTSTTSCSSSCEEEEEECTTSCEEEEE
T ss_pred -EeecCCCCccccCCCeEEEEEEcCCCCEEEEeCChhheEcCCCCeEEEEecCCCCCCCCCCCcEEEEEEeCCcCEEEEE
Confidence 3322 23588888864 4577777668999998776543222111 112346777777777655433
Q ss_pred CCCCccEEEEEEccCCccc-----------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC------
Q 019672 154 ASTTKGSVLVYNVMELHSH-----------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG------ 216 (337)
Q Consensus 154 ~~~~dg~v~i~d~~~~~~~-----------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~------ 216 (337)
. ++-|..|+..+.... ....|.++..+++|++-+ |+.++. +..||..+++... +...
T Consensus 328 ~---~~Gl~~~~~~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~lWi-Gt~~~G-l~~~~~~~~~~~~-~~~~~~~~~~ 401 (795)
T 4a2l_A 328 Y---FGGLNYYHPIRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNLWI-GTNDGG-LNLYNPITQRFTS-YTLQEDESAR 401 (795)
T ss_dssp S---SSCEEEECGGGGSSEEECCCTTSSSCSCSSEEEEEECTTSCEEE-EESSSC-EEEECTTTCCEEE-ECCC------
T ss_pred C---CCCeEEeCCCcccceEEcCCCCCCCCCCCeeEEEEECCCCCEEE-EECCCC-eEEEcCCCCcEEE-EecCCCCccc
Confidence 2 355888886543211 125699999999998555 666644 4689988765432 2211
Q ss_pred -CcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 217 -TYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 217 -~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
.....|.++...++|. .|..|+.++-|.+||.+++
T Consensus 402 ~l~~~~v~~i~~d~~g~---~lWigt~~~Gl~~~d~~~~ 437 (795)
T 4a2l_A 402 GIGSNNIKAVYVDEKKS---LVYIGTHAGGLSILHRNSG 437 (795)
T ss_dssp CCSCSCEEEEEEETTTT---EEEEEETTTEEEEEETTTC
T ss_pred CCCCccEEEEEEcCCCC---EEEEEeCcCceeEEeCCCC
Confidence 1124599999988886 6888888777999987654
No 257
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.23 E-value=0.0035 Score=62.18 Aligned_cols=231 Identities=12% Similarity=0.087 Sum_probs=137.6
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEE-e-----e---CCEEEEEEccCCCEEEEEeCCCCCCCCCce
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYER-A-----V---GAFSIVEMLYSSSLLAIVGAGEQPSLSPRR 76 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~-~-----~---~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~ 76 (337)
+...|+++...++|.+.+....+|+..|+..+.....-. . . ..-.+.++..+.+..+.++. .++-
T Consensus 311 ~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt------~~~G 384 (781)
T 3v9f_A 311 SNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGT------DGGG 384 (781)
T ss_dssp SSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEE------BSSC
T ss_pred CCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEe------CCCc
Confidence 346799999999998655444788999988765433211 0 0 11123344444433233333 2456
Q ss_pred EEEEECCCCCEEEEE---E-cCCceeEEEEc-CCeEEEEE-CCeEEEEECCCCeeeeeecC-CCCCceEEEEeeCCCccE
Q 019672 77 LCLFNTTTGTALREL---N-FLTSILAVRLN-KKRLVIVL-REKTYIYDANTLAILDTIDT-VPNLKGLCAFSPSLNACF 149 (337)
Q Consensus 77 v~iwd~~~~~~~~~~---~-~~~~v~~i~~~-~~~~~v~~-d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 149 (337)
|..||..+++...-. . ....|.++..+ .+.+.+++ ++-+..+|..+++.. .+.. ......+.++..++++.+
T Consensus 385 l~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~v~~i~~d~~g~l 463 (781)
T 3v9f_A 385 INVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKKFQ-IIELEKNELLDVRVFYEDKNKKI 463 (781)
T ss_dssp EEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCEEE-ECCSTTTCCCCEEEEEECTTSEE
T ss_pred EEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCcEE-EeccCCCCCCeEEEEEECCCCCE
Confidence 888888754322110 1 12468888876 45677777 478999998776543 2221 112235677777777665
Q ss_pred EEEcCCCCccEEEEEEccCCcccc----------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeecc--CC
Q 019672 150 LAVPASTTKGSVLVYNVMELHSHC----------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR--GT 217 (337)
Q Consensus 150 la~~~~~~dg~v~i~d~~~~~~~~----------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~--~~ 217 (337)
.+... +-|..||..+.+..+ ...|.++..+++|++.+.....| + ..+|..+++. ..+.. +.
T Consensus 464 wigt~----~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~G-l-~~~~~~~~~~-~~~~~~~~l 536 (781)
T 3v9f_A 464 WIGTH----AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGGG-V-GIYTPDMQLV-RKFNQYEGF 536 (781)
T ss_dssp EEEET----TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSSC-E-EEECTTCCEE-EEECTTTTC
T ss_pred EEEEC----CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCCC-E-EEEeCCCCeE-EEccCCCCC
Confidence 54332 348889887654321 25699999999998666544456 4 5788876643 33321 12
Q ss_pred cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 218 YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 218 ~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
....|.++...++|. +.+ |+.+|.|..||.++.
T Consensus 537 ~~~~i~~i~~d~~g~---lWi-~T~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 537 CSNTINQIYRSSKGQ---MWL-ATGEGLVCFPSARNF 569 (781)
T ss_dssp SCSCEEEEEECTTSC---EEE-EETTEEEEESCTTTC
T ss_pred CCCeeEEEEECCCCC---EEE-EECCCceEEECCCCC
Confidence 234589999999998 444 444776588876543
No 258
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=98.23 E-value=0.00059 Score=60.45 Aligned_cols=172 Identities=14% Similarity=0.170 Sum_probs=107.3
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcCCe--------EEEEE--C---CeEEEEECC-CCeeeeeec-------CC
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNKKR--------LVIVL--R---EKTYIYDAN-TLAILDTID-------TV 132 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~--------~~v~~--d---~~i~i~d~~-~~~~~~~~~-------~~ 132 (337)
.+-|.++|+ +|+.+..+.. ..+..+.+-++. +++++ + ++|.+|++. ....+..+. +.
T Consensus 49 ~~gL~Vydl-~G~~l~~~~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~t~ 126 (355)
T 3amr_A 49 KSGLVVYSL-DGKMLHSYNT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIATA 126 (355)
T ss_dssp TTEEEEEET-TSCEEEEECC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEECC
T ss_pred CCCEEEEcC-CCcEEEEccC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcCCC
Confidence 578999999 8888888764 456665554432 44444 4 589999773 222344442 11
Q ss_pred -CCCceEEEEeeCCCcc-EEEEcCCCCccEEEEEEccC---C----ccccc----CceEEEEeCCCCCEEEEEeCCCcEE
Q 019672 133 -PNLKGLCAFSPSLNAC-FLAVPASTTKGSVLVYNVME---L----HSHCE----APLAAIVLSSNGMYIATASEQGTII 199 (337)
Q Consensus 133 -~~~~~~~~~~~~~~~~-~la~~~~~~dg~v~i~d~~~---~----~~~~~----~~i~~~~~s~dg~~lat~s~dg~~i 199 (337)
..+.++|.+.....+. ++++.+ .+|.+..|++.. + +.+.+ +.+..|++++...+|..+-++-. |
T Consensus 127 ~~~pyGlcly~~~~~g~~yafV~~--k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~G-I 203 (355)
T 3amr_A 127 INEVYGFTLYHSQKTGKYYAMVTG--KEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEA-I 203 (355)
T ss_dssp CSSCCCEEEEECTTTCCEEEEEEC--SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTE-E
T ss_pred CCCeeEEEEEecCCCCcEEEEEEC--CCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccce-E
Confidence 3445555544322343 455555 479999999843 2 22222 77889999998889999998854 4
Q ss_pred EEEEcC-----CCceeEeeccCCcceeEEEEEe--ecCCCcccEEEEEe-CCCcEEEEecC
Q 019672 200 RVFLVS-----EATKSYSFRRGTYPSTIFSLSF--GQSMQFQDILVATS-SSGSLHVFSPG 252 (337)
Q Consensus 200 ~vwd~~-----~~~~~~~~~~~~~~~~i~~l~f--s~dg~~~~~las~s-~dg~v~iw~l~ 252 (337)
..++.+ +++.+..+..+.-.+.+..|++ .++++ .+|++++ .+++..|||.+
T Consensus 204 w~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~--gyLivSsQG~~s~~Vydr~ 262 (355)
T 3amr_A 204 WKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGK--GYLMASSQGNSSYAIYDRQ 262 (355)
T ss_dssp EEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGC--EEEEEEEGGGTEEEEEESS
T ss_pred EEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCC--EEEEEEcCCCCEEEEEECC
Confidence 556654 3455655533333345777777 45554 2566655 56799999985
No 259
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.22 E-value=0.0018 Score=55.02 Aligned_cols=211 Identities=7% Similarity=-0.067 Sum_probs=120.6
Q ss_pred eEEEEEcCCCCEEEEEc-C-CceEEEeCCCCcEEEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 10 VFFVSFNQDNSGFALST-K-DGFKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 10 v~~~~fs~dg~~la~g~-~-~g~~vw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
...++|++++..|..+. . +.+.+++.++........ ......+.+.+....+.++.. ..++|.++++...
T Consensus 38 ~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~------~~~~I~~~~~~g~ 111 (267)
T 1npe_A 38 IIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDS------QLDRIEVAKMDGT 111 (267)
T ss_dssp EEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEET------TTTEEEEEETTSC
T ss_pred EEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEEC------CCCEEEEEEcCCC
Confidence 46889999776665543 3 347888987664322221 123344555555555555544 3678999998754
Q ss_pred CEEEEEEcC-CceeEEEEcC--CeEEEEE----CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCc
Q 019672 86 TALRELNFL-TSILAVRLNK--KRLVIVL----REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTK 158 (337)
Q Consensus 86 ~~~~~~~~~-~~v~~i~~~~--~~~~v~~----d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~d 158 (337)
......... .....+++++ ..++++. .+.|..+++... ....+... .......++.++++..|..+.. ..
T Consensus 112 ~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~-~~~~~~~~-~~~~P~gia~d~~~~~lyv~d~-~~ 188 (267)
T 1npe_A 112 QRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGT-NRRILAQD-NLGLPNGLTFDAFSSQLCWVDA-GT 188 (267)
T ss_dssp SCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSC-CCEEEECT-TCSCEEEEEEETTTTEEEEEET-TT
T ss_pred CEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCC-CcEEEEEC-CCCCCcEEEEcCCCCEEEEEEC-CC
Confidence 332222222 3567888886 4566665 247888887533 22222111 1112344555565545544443 46
Q ss_pred cEEEEEEccCCcccc---c-CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCC
Q 019672 159 GSVLVYNVMELHSHC---E-APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQ 232 (337)
Q Consensus 159 g~v~i~d~~~~~~~~---~-~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~ 232 (337)
+.|.++|+....... . .....+++. +..|..+...+..|.++|..+++.+.++..+.. ...+.+++.|++.
T Consensus 189 ~~I~~~~~~g~~~~~~~~~~~~P~gi~~d--~~~lyva~~~~~~v~~~d~~~g~~~~~i~~g~~-~~p~gi~~~~~~~ 263 (267)
T 1npe_A 189 HRAECLNPAQPGRRKVLEGLQYPFAVTSY--GKNLYYTDWKTNSVIAMDLAISKEMDTFHPHKQ-TRLYGITIALSQC 263 (267)
T ss_dssp TEEEEEETTEEEEEEEEECCCSEEEEEEE--TTEEEEEETTTTEEEEEETTTTEEEEEECCSSC-CCCCCEEEECSCC
T ss_pred CEEEEEecCCCceEEEecCCCCceEEEEe--CCEEEEEECCCCeEEEEeCCCCCceEEEccccc-cccceeeecCccC
Confidence 899999987543211 1 334566664 445555554433468999999998888754421 1246678888864
No 260
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=98.21 E-value=0.00018 Score=69.16 Aligned_cols=224 Identities=10% Similarity=0.075 Sum_probs=131.5
Q ss_pred EEEEcCCc-eEEEeCCCCcEEEEEeeCCE----EEE-E-EccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC
Q 019672 22 FALSTKDG-FKIFDSSTGRLCYERAVGAF----SIV-E-MLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL 94 (337)
Q Consensus 22 la~g~~~g-~~vw~~~~~~~~~~~~~~~~----~~~-~-~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~ 94 (337)
+.+++.++ +..+|..+|+++........ .+. . ... .+.+ +++.+......++.|+.+|.++|+.+-++...
T Consensus 124 V~v~t~dg~l~AlDa~TG~~~W~~~~~~~~~~~~~~ssP~v~-~g~V-~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~ 201 (599)
T 1w6s_A 124 ILKTQLDGNVAALNAETGETVWKVENSDIKVGSTLTIAPYVV-KDKV-IIGSSGAELGVRGYLTAYDVKTGEQVWRAYAT 201 (599)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEECCCGGGTCBCCSCCEEE-TTEE-EECCBCGGGTCCCEEEEEETTTCCEEEEEESS
T ss_pred EEEEcCCCEEEEEECCCCCEEEeecCCCCCccceeecCCEEE-CCEE-EEEecccccCCCCeEEEEECCCCcEEEEEcCC
Confidence 66676655 68899999999877543220 000 0 011 2333 33321000002789999999999998877654
Q ss_pred Ccee---------------------------------------EEEE--cCCeEEEEE-C----------------CeEE
Q 019672 95 TSIL---------------------------------------AVRL--NKKRLVIVL-R----------------EKTY 116 (337)
Q Consensus 95 ~~v~---------------------------------------~i~~--~~~~~~v~~-d----------------~~i~ 116 (337)
.+.. ...+ ..+.+++.. + +.|.
T Consensus 202 ~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~ 281 (599)
T 1w6s_A 202 GPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIF 281 (599)
T ss_dssp SCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEE
T ss_pred CCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEE
Confidence 3220 1223 234455544 2 3799
Q ss_pred EEECCCCeeeeeecCCCCCc-------eEEEEee-CCCc---cEEEEcCCCCccEEEEEEccCCccccc---C-------
Q 019672 117 IYDANTLAILDTIDTVPNLK-------GLCAFSP-SLNA---CFLAVPASTTKGSVLVYNVMELHSHCE---A------- 175 (337)
Q Consensus 117 i~d~~~~~~~~~~~~~~~~~-------~~~~~~~-~~~~---~~la~~~~~~dg~v~i~d~~~~~~~~~---~------- 175 (337)
.+|..+++.+..++...+.. ....+.. ..++ ..++.++ .+|.+.++|..+++.+.. .
T Consensus 282 Ald~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~--~~G~l~~lD~~tG~~lw~~~~~~~~~~~~ 359 (599)
T 1w6s_A 282 GRDADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPD--RNGIVYTLDRTDGALVSANKLDDTVNVFK 359 (599)
T ss_dssp EEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEEC--TTSEEEEEETTTCCEEEEEESSTTCCSEE
T ss_pred EEeCCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEEC--CCcEEEEEECCCCCEeecccccCCccccc
Confidence 99999999988776543211 1111121 1234 3555555 489999999988875421 1
Q ss_pred --------ce--------------------------EEEEeCCCCCEEEEEe----------------------------
Q 019672 176 --------PL--------------------------AAIVLSSNGMYIATAS---------------------------- 193 (337)
Q Consensus 176 --------~i--------------------------~~~~~s~dg~~lat~s---------------------------- 193 (337)
++ ..++++|+..++....
T Consensus 360 ~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~ 439 (599)
T 1w6s_A 360 SVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFFMGINHICMDWEPFMLPYKAGQFFVGATLNMY 439 (599)
T ss_dssp EECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEE
T ss_pred ccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEEEeccccceeeecccccccCCcceecccceec
Confidence 11 2456777766655432
Q ss_pred -----------CCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 194 -----------EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 194 -----------~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
.+|. +.-||+.+|+.+.+...+. +..+-.....+. .+..++.||.++.||.++++.
T Consensus 440 ~~p~~~~~~~~~~G~-l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagg---~vf~gt~dg~l~A~D~~tG~~ 506 (599)
T 1w6s_A 440 PGPKGDRQNYEGLGQ-IKAYNAITGDYKWEKMERF---AVWGGTMATAGD---LVFYGTLDGYLKARDSDTGDL 506 (599)
T ss_dssp ECTTSBTTTTBCCEE-EEEECTTTCCEEEEEEESS---CCCSBCEEETTT---EEEEECTTSEEEEEETTTCCE
T ss_pred cCCcCCcccCCCcCe-EEEEECCCCCEEeEecCCC---CccCcceEecCC---EEEEECCCCeEEEEECCCCCE
Confidence 2355 5789999999887764331 111111223455 788899999999999988765
No 261
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=98.10 E-value=0.0047 Score=61.24 Aligned_cols=229 Identities=8% Similarity=-0.028 Sum_probs=134.3
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEE-e------eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYER-A------VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~-~------~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
...|.++...++|.+.+. +.+|+.+||..+++...-. . .....+.++..+.+..+.++. ..+-|.+
T Consensus 210 ~~~i~~i~~d~~g~lwig-t~~Gl~~~d~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWigt------~~~Gl~~ 282 (781)
T 3v9f_A 210 GNDVRCIYKDTNGNIWIG-TSKGLALFNANTETFTNFHNNPGNIHGALSSYIFSIKQLKDNKLWIAT------ELNGIMI 282 (781)
T ss_dssp CSSEEEEEECTTCCEEEE-ETTEEEEEETTTTEEEC-----------CCCCEEEEEECTTSEEEEEE------SSSCEEE
T ss_pred CCceeEEEEcCCCCEEEE-eCCcHheECCCCCcEEEEEcCCCccccccCceEEEEEECCCCCEEEEe------CCCCeEE
Confidence 356999999999886554 4559999998776543211 1 111223344444444444443 2357889
Q ss_pred EECCCCCEEEEEE---------------cCCceeEEEEcCC-eEEEEE-CCeEEEEECCCCeeeeeecC--------CCC
Q 019672 80 FNTTTGTALRELN---------------FLTSILAVRLNKK-RLVIVL-REKTYIYDANTLAILDTIDT--------VPN 134 (337)
Q Consensus 80 wd~~~~~~~~~~~---------------~~~~v~~i~~~~~-~~~v~~-d~~i~i~d~~~~~~~~~~~~--------~~~ 134 (337)
+|..+++...... ....|.++..+++ .+.+++ ++-|..|+....... .+.. ...
T Consensus 283 ~~~~~~~~~~~~~~~f~~~~~~~~~~~l~~~~v~~i~~D~~g~lWigt~~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~l~ 361 (781)
T 3v9f_A 283 LDLQQNQFLLPEQIRFEFIREGDNNYSLSNASARYIFQDSFNNIWIGTWGGGINFISNAPPTFH-TWSYSPTQMNESSLS 361 (781)
T ss_dssp EETTCC---------CEEECBCSSTTSBSSSCEEEEEECSSCCEEEEEBSSCEEEECSSCCSCE-EEC----CCCSSCCS
T ss_pred ECCCCCeeeeeeccccccccCCCCCCCCCCCeEEEEEEeCCCCEEEEecCCeEEEeCCCCCcce-eeccCccccccCCCC
Confidence 9987765332111 1236888888664 466777 778999988654322 2211 011
Q ss_pred CceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcccc--------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCC
Q 019672 135 LKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSHC--------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSE 206 (337)
Q Consensus 135 ~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~~--------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~ 206 (337)
...+.++..++++.+.+... ++-|..||..+....+ ...|.++..+++|++.+ |+.++. +..+|..+
T Consensus 362 ~~~v~~i~~d~~g~lWigt~---~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~G-l~~~~~~~ 436 (781)
T 3v9f_A 362 NKVVSSVCDDGQGKLWIGTD---GGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGN-ISYYNTRL 436 (781)
T ss_dssp SSCEEEEEECTTSCEEEEEB---SSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEE-EETTEE-EEEECSSS
T ss_pred CcceEEEEEcCCCCEEEEeC---CCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEE-EeccCC-EEEEcCCC
Confidence 23467777777665544321 3448888876543221 26799999999988665 555444 46888877
Q ss_pred CceeEeecc-CCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 207 ATKSYSFRR-GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 207 ~~~~~~~~~-~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
++. ..+.. ......|.++...++|. |-.|+. +-|..|+.++.
T Consensus 437 ~~~-~~~~~~~~~~~~v~~i~~d~~g~----lwigt~-~Gl~~~~~~~~ 479 (781)
T 3v9f_A 437 KKF-QIIELEKNELLDVRVFYEDKNKK----IWIGTH-AGVFVIDLASK 479 (781)
T ss_dssp CEE-EECCSTTTCCCCEEEEEECTTSE----EEEEET-TEEEEEESSSS
T ss_pred CcE-EEeccCCCCCCeEEEEEECCCCC----EEEEEC-CceEEEeCCCC
Confidence 654 23322 12234699999988886 444455 45888887653
No 262
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=98.05 E-value=0.0052 Score=53.65 Aligned_cols=254 Identities=11% Similarity=0.147 Sum_probs=153.1
Q ss_pred eEEEeCCCCcEEEE-EeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEE-cCCeE
Q 019672 30 FKIFDSSTGRLCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKRL 107 (337)
Q Consensus 30 ~~vw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~~ 107 (337)
+.|-|+.+...... ....+.. -|.+..+.+++-++ +++.|+|+++.+.++...++++|.--+| +++.+
T Consensus 51 VvIiDl~n~~~~~Rrpi~AdsA--IMnP~~~ViALrag--------~~LQiFnletK~klks~~~~e~VvfWkWis~~~L 120 (365)
T 2xzh_A 51 VVIIDMNDPSNPIRRPISADSA--IMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTV 120 (365)
T ss_dssp EEEEETTSTTSCEEEECCCSEE--EECSSSSEEEEEET--------TEEEEEETTTTEEEEEEECSSCEEEEEECSSSEE
T ss_pred EEEEECCCCCCcccccccccee--eeCCCccEEEEecC--------CeEEEechHHhhhhcceecCCccEEEEecCCCeE
Confidence 57778877644322 2223333 34566778887764 6999999999999999999999988777 78889
Q ss_pred EEEECCeEEEEECCCC-eeeeeecCCC--CCceEEEEeeCCCccEEEEcCC-----CCccEEEEEEccCCccc-ccCceE
Q 019672 108 VIVLREKTYIYDANTL-AILDTIDTVP--NLKGLCAFSPSLNACFLAVPAS-----TTKGSVLVYNVMELHSH-CEAPLA 178 (337)
Q Consensus 108 ~v~~d~~i~i~d~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~-----~~dg~v~i~d~~~~~~~-~~~~i~ 178 (337)
.++++..|+-|++... .+.+.++.+. +...+..+..+++..+++..|- .-.|.+++|........ .++..-
T Consensus 121 ~lVT~taVyHWs~~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGhaa 200 (365)
T 2xzh_A 121 ALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAA 200 (365)
T ss_dssp EEEESSEEEEEESSTTCCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTEEEEECCSEE
T ss_pred EEEcCCcEEEEcccCCCCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccccceeeeeee
Confidence 9999999999999642 4444444332 2456788888999988876651 12588899988765422 122211
Q ss_pred E-EEeCCCCC-----EEEEEe--CCCcEEEEEEcCCC---ce-----eEee--ccCCcceeEEEEEeecCCCcccEEEEE
Q 019672 179 A-IVLSSNGM-----YIATAS--EQGTIIRVFLVSEA---TK-----SYSF--RRGTYPSTIFSLSFGQSMQFQDILVAT 240 (337)
Q Consensus 179 ~-~~~s~dg~-----~lat~s--~dg~~i~vwd~~~~---~~-----~~~~--~~~~~~~~i~~l~fs~dg~~~~~las~ 240 (337)
+ ..+-.+|+ +++-+. ..|.-++|-++... .. ...+ .......--.++..|+.-. .+..-
T Consensus 201 ~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kyg---viyvi 277 (365)
T 2xzh_A 201 SFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLI 277 (365)
T ss_dssp EEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTT---EEEEE
T ss_pred eeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCC---EEEEE
Confidence 1 12222222 333232 22323578887432 11 1111 1110011134677777766 88888
Q ss_pred eCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 241 SSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 241 s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
+.-|.||+||++++.. -|+..+.++.+ +..+ ......-+++....|.+.--.++.+
T Consensus 278 TK~G~ihlyDleTgt~--------i~~nrIS~d~i---F~ta----------~~~~~~Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 278 TKYGYIHLYDLETGTC--------IYMNRISGETI---FVTA----------PHEATAGIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp ETTSEEEEEETTTCCE--------EEEEECCSSCE---EEEE----------EEGGGTEEEEEETTCEEEEEEECTT
T ss_pred eCCcEEEEEEcccCcE--------EEEeccCCCce---EEec----------ccCCCCcEEEEcCCCEEEEEEECcc
Confidence 9999999999998764 22222322211 0000 0111245888888898777766644
No 263
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=98.04 E-value=0.0016 Score=62.33 Aligned_cols=229 Identities=11% Similarity=0.128 Sum_probs=130.7
Q ss_pred CCEEEEEcCCc-eEEEeCCCCcEEEEEeeCC------E---EEEE-EccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE
Q 019672 19 NSGFALSTKDG-FKIFDSSTGRLCYERAVGA------F---SIVE-MLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 19 g~~la~g~~~g-~~vw~~~~~~~~~~~~~~~------~---~~~~-~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~ 87 (337)
+..+.+++.++ +.-+|..+|+++...+... + ..+. -.......++++........++.|..+|.++|+.
T Consensus 117 ~~~v~~~t~dg~l~AlD~~TG~~~W~~~~~~~~~~~~~~~sP~v~~~~~~G~~~v~vg~~~~e~~~~g~v~alD~~tG~~ 196 (582)
T 1flg_A 117 GDKVFFGTLDASVVALNKNTGKVVWKKKFADHGAGYTMTGAPTIVKDGKTGKVLLIHGSSGDEFGVVGRLFARDPDTGEE 196 (582)
T ss_dssp TTEEEEEETTTEEEEEESSSCCEEEEEECSCGGGTCBCCSCCEEEECTTTCCEEEEECCBCGGGCCBCEEEEECTTTCCE
T ss_pred CCEEEEEeCCCEEEEEECCCCCEEeeecCCCCCcCcccccCCEEeCCCcCCcEEEEEeccccccCCCCEEEEEECCCCCE
Confidence 34566666554 6889999999887654321 0 1111 0001111344432100000268999999999998
Q ss_pred EEEEEcCCce------------------------------------------eEEEEc--CCeEEEEE------------
Q 019672 88 LRELNFLTSI------------------------------------------LAVRLN--KKRLVIVL------------ 111 (337)
Q Consensus 88 ~~~~~~~~~v------------------------------------------~~i~~~--~~~~~v~~------------ 111 (337)
+-+....... ...+++ .+.+++..
T Consensus 197 ~W~~~~~~~~~~p~~~~~~~~~g~~g~~~w~~~~~~~~g~~~~~~~gGg~~w~~~a~d~~~g~vyv~~gn~~~~~~~~r~ 276 (582)
T 1flg_A 197 IWMRPFVEGHMGRLNGKDSTVTGDVKAPSWPDDRNSPTGKVESWSHGGGAPWQSASFDAETNTIIVGAGNPGPWNTWART 276 (582)
T ss_dssp EEEEESSTTCEEEETTEEEEESSCTTCTTSCBCTTSTTSBCGGGGGCBCCCCSCCEEETTTTEEEEEECCBSSSCGGGGS
T ss_pred EeecCCCccccccccCcccccccccccccCCCccccccccccccccCCccccCCceEcCCCCEEEEeCCCCCcccCcccc
Confidence 8766442100 012232 24455554
Q ss_pred ---------C----CeEEEEECCCCeeeeeecCCCCC-------ceEEEEeeC-CCc---cEEEEcCCCCccEEEEEEcc
Q 019672 112 ---------R----EKTYIYDANTLAILDTIDTVPNL-------KGLCAFSPS-LNA---CFLAVPASTTKGSVLVYNVM 167 (337)
Q Consensus 112 ---------d----~~i~i~d~~~~~~~~~~~~~~~~-------~~~~~~~~~-~~~---~~la~~~~~~dg~v~i~d~~ 167 (337)
| +.|..+|..+++.+..++...+. .....+... .++ ..++.++ .+|.+.++|..
T Consensus 277 ~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l~~~~~~~G~~~~~v~~~~--~~G~l~~lD~~ 354 (582)
T 1flg_A 277 AKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVLFDYKAKDGKIVKATAHAD--RNGFFYVVDRS 354 (582)
T ss_dssp CTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEEEEEECSSSCEEEEEEEEC--TTSEEEEEETT
T ss_pred cCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEEEeeecCCCCEEEEEEEEC--CCceEEEEECC
Confidence 1 47999999999998887553221 111112211 233 3555555 48999999998
Q ss_pred CCccccc---Cc-----------------------------------------------eEEEEeCCCCCEEEEEe----
Q 019672 168 ELHSHCE---AP-----------------------------------------------LAAIVLSSNGMYIATAS---- 193 (337)
Q Consensus 168 ~~~~~~~---~~-----------------------------------------------i~~~~~s~dg~~lat~s---- 193 (337)
+++.+.. .+ -..++++|+..++....
T Consensus 355 tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~ 434 (582)
T 1flg_A 355 NGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWK 434 (582)
T ss_dssp TCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEE
T ss_pred CCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEECcCCccccCCCCceECCCCCEEEEechhcc
Confidence 8765421 10 01356777655554433
Q ss_pred -----------------------------CCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCC
Q 019672 194 -----------------------------EQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG 244 (337)
Q Consensus 194 -----------------------------~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg 244 (337)
.+|. |.-||+.+|+.+.+...+. ++..-.....+. +++.++.||
T Consensus 435 ~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~-l~A~D~~tG~~~W~~~~~~---~~~~g~~~tagg---lvf~g~~dg 507 (582)
T 1flg_A 435 EDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGS-LRAMDPVSGKVVWEHKEHL---PLWAGVLATAGN---LVFTGTGDG 507 (582)
T ss_dssp EEEEECCCCCCTTSCCCCEEEEEEESCSSCSEE-EEEECTTTCCEEEEEEESS---CCCSCCEEETTT---EEEEECTTS
T ss_pred eeeecccccccCCCceeccceeecCCCCCCcce-EEEEECCCCCEEEEecCCC---CCcccceEeCCC---EEEEECCCC
Confidence 2465 5789999999887765432 111111222355 788899999
Q ss_pred cEEEEecCCCcc
Q 019672 245 SLHVFSPGFAIN 256 (337)
Q Consensus 245 ~v~iw~l~~~~~ 256 (337)
.++.||.++++.
T Consensus 508 ~l~A~D~~tG~~ 519 (582)
T 1flg_A 508 YFKAFDAKSGKE 519 (582)
T ss_dssp EEEEEETTTCCE
T ss_pred cEEEEECCCCCE
Confidence 999999988765
No 264
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=98.01 E-value=0.0081 Score=54.52 Aligned_cols=255 Identities=12% Similarity=0.149 Sum_probs=153.0
Q ss_pred ceEEEeCCCCcEEEE-EeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEE-cCCe
Q 019672 29 GFKIFDSSTGRLCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKR 106 (337)
Q Consensus 29 g~~vw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~ 106 (337)
.+.|-|+.+...... ....+.. -|.+..+.+++-++ +++.|+|+++.+.++...++++|.--+| +++.
T Consensus 49 ~vvIiDl~~~~~~~rrpi~AdsA--IMnP~~~iiALrag--------~~lQiFnle~K~klks~~~~e~VvfWkWis~~~ 118 (494)
T 1bpo_A 49 QVVIIDMNDPSNPIRRPISADSA--IMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNT 118 (494)
T ss_dssp EEEEEETTSTTSCEEEECCCSEE--EECSSSSCEEEEET--------TEEEEEETTTTEEEEEEECSSCCCEEEEEETTE
T ss_pred eEEEEECCCCCcceeccccccee--eeCCCCcEEEEecC--------CeEEEEchHHhhhhcceecCCCceEEEecCCCe
Confidence 367778776644322 2222222 35566778887764 6999999999999999999999887776 7889
Q ss_pred EEEEECCeEEEEECCCC-eeeeeecCCC--CCceEEEEeeCCCccEEEEcCC-----CCccEEEEEEccCCccc-ccCce
Q 019672 107 LVIVLREKTYIYDANTL-AILDTIDTVP--NLKGLCAFSPSLNACFLAVPAS-----TTKGSVLVYNVMELHSH-CEAPL 177 (337)
Q Consensus 107 ~~v~~d~~i~i~d~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~-----~~dg~v~i~d~~~~~~~-~~~~i 177 (337)
+.++++..|+-|++... .+.+.++.+. +...+..+..+++..+++..|- .-.|.+++|........ .++..
T Consensus 119 l~lVT~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~sQ~ieGha 198 (494)
T 1bpo_A 119 VALVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHA 198 (494)
T ss_dssp EEEECSSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCEEEECCSE
T ss_pred EEEEcCCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccceEEEeeccccccchheeee
Confidence 99999999999999642 4444444332 2456788888999998886651 13588899988765422 11111
Q ss_pred EE-EEeCCCC-----CEEEEEeCC--CcEEEEEEcCCC---c-----eeEeeccCC--cceeEEEEEeecCCCcccEEEE
Q 019672 178 AA-IVLSSNG-----MYIATASEQ--GTIIRVFLVSEA---T-----KSYSFRRGT--YPSTIFSLSFGQSMQFQDILVA 239 (337)
Q Consensus 178 ~~-~~~s~dg-----~~lat~s~d--g~~i~vwd~~~~---~-----~~~~~~~~~--~~~~i~~l~fs~dg~~~~~las 239 (337)
-+ ..+-.+| +.++-+... |.-++|-++... . +...+.... ...--.++..|+.-. .+..
T Consensus 199 a~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kyg---viyv 275 (494)
T 1bpo_A 199 ASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFL 275 (494)
T ss_dssp EEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTT---EEEE
T ss_pred eeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCC---EEEE
Confidence 11 1111121 133333322 223678887432 1 111111111 011134678887776 8888
Q ss_pred EeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEecC
Q 019672 240 TSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSIN 317 (337)
Q Consensus 240 ~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~~ 317 (337)
-..-|.||+||++++.. -|+..+.++.+ +..+ + .....-+++....|.|.--.++.+
T Consensus 276 iTK~G~i~lyDleTgt~--------i~~nrIs~~~i---F~t~---------~-~~~~~Gi~~Vnr~GqVl~v~v~e~ 332 (494)
T 1bpo_A 276 ITKYGYIHLYDLETGTC--------IYMNRISGETI---FVTA---------P-HEATAGIIGVNRKGQVLSVCVEEE 332 (494)
T ss_dssp EETTSEEEEEETTTCCE--------EEEEECCSSCE---EEEE---------E-ETTTTEEEEEETTCEEEEEEECTT
T ss_pred EecCceEEEEeccccee--------eeeecccCCce---EEec---------c-cCCCCcEEEEccCceEEEEEEccc
Confidence 89999999999998764 22222222211 0000 0 111245888888888777766544
No 265
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.99 E-value=0.00029 Score=68.71 Aligned_cols=181 Identities=11% Similarity=0.081 Sum_probs=115.9
Q ss_pred CceEEEEECCCCCEEEEEEcCCce------------eEEEEcCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEE
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSI------------LAVRLNKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCA 140 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v------------~~i~~~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 140 (337)
++.|..+|.++|+.+-++....+. ..+.+..+.+++.. ++.+..+|..+++.+..+........ ..
T Consensus 75 ~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~~~~~~~~~~-~~ 153 (668)
T 1kv9_A 75 WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWSQQTTDPAKP-YS 153 (668)
T ss_dssp GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEEEECSCTTSS-CB
T ss_pred CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeeeeccCCCCCc-ce
Confidence 789999999999999887653321 22445567777776 88999999999999887755321100 00
Q ss_pred EeeCC---CccEEEEcCCC----CccEEEEEEccCCccccc------Cc------------------------------e
Q 019672 141 FSPSL---NACFLAVPAST----TKGSVLVYNVMELHSHCE------AP------------------------------L 177 (337)
Q Consensus 141 ~~~~~---~~~~la~~~~~----~dg~v~i~d~~~~~~~~~------~~------------------------------i 177 (337)
+...| ++ .++++... .+|.|..+|..+++.+-+ .+ .
T Consensus 154 ~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w 232 (668)
T 1kv9_A 154 ITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVW 232 (668)
T ss_dssp CCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCC
T ss_pred ecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccc
Confidence 00011 22 33333210 158899999988876422 00 1
Q ss_pred EEEEeCCCCCEEEEEeCCCc------------------EEEEEEcCCCceeEeeccCCcc-------eeEEEEEeecCCC
Q 019672 178 AAIVLSSNGMYIATASEQGT------------------IIRVFLVSEATKSYSFRRGTYP-------STIFSLSFGQSMQ 232 (337)
Q Consensus 178 ~~~~~s~dg~~lat~s~dg~------------------~i~vwd~~~~~~~~~~~~~~~~-------~~i~~l~fs~dg~ 232 (337)
..++++|++.++..++.++. .|.-+|..+|+.+..+...++. .+.....+..+|+
T Consensus 233 ~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~ 312 (668)
T 1kv9_A 233 DSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGK 312 (668)
T ss_dssp SCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTE
T ss_pred cceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCc
Confidence 24688888888888887663 2578999999999887654221 2222223334663
Q ss_pred cccEEEEEeCCCcEEEEecCCCcc
Q 019672 233 FQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 233 ~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
....++.++.+|.++++|..+++.
T Consensus 313 ~~~~v~~~~~~G~l~~lD~~tG~~ 336 (668)
T 1kv9_A 313 PRKVLMQAPKNGFFYVLDRTNGKL 336 (668)
T ss_dssp EEEEEEECCTTSEEEEEETTTCCE
T ss_pred EEEEEEEECCCCEEEEEECCCCCE
Confidence 112588999999999999877653
No 266
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=97.90 E-value=0.0048 Score=54.65 Aligned_cols=185 Identities=12% Similarity=0.234 Sum_probs=107.9
Q ss_pred CCCEEE-EEcCCceEEEeCCCCcEEEEEeeCCEEEEEEccC----CC--EEEEEeCCCCCCCC--CceEEEEEC--CCCC
Q 019672 18 DNSGFA-LSTKDGFKIFDSSTGRLCYERAVGAFSIVEMLYS----SS--LLAIVGAGEQPSLS--PRRLCLFNT--TTGT 86 (337)
Q Consensus 18 dg~~la-~g~~~g~~vw~~~~~~~~~~~~~~~~~~~~~~~~----~~--~~~~~~~g~~~~~~--d~~v~iwd~--~~~~ 86 (337)
..++++ +-...|+.|||+ .|+++.....+...-+.+.+. .. -+++++.. . +++|+++++ .+++
T Consensus 39 ~~s~ii~t~k~~gL~Vydl-~G~~l~~~~~g~~nnVD~r~~~~l~g~~~dla~as~R-----~~~~n~l~vf~iDp~~~~ 112 (355)
T 3amr_A 39 QNSKLITTNKKSGLVVYSL-DGKMLHSYNTGKLNNVDIRYDFPLNGKKVDIAAASNR-----SEGKNTIEIYAIDGKNGT 112 (355)
T ss_dssp GGCEEEEEETTTEEEEEET-TSCEEEEECCSCEEEEEEEEEEEETTEEEEEEEEEEC-----STTCCEEEEEEECTTTCC
T ss_pred CccEEEEEcCCCCEEEEcC-CCcEEEEccCCCcccEEEecccccCCceEeEEEEeCC-----CCCCCeEEEEEECCCCCc
Confidence 445533 334457999999 788777665444444444331 11 14556552 4 689999955 4544
Q ss_pred EEEEEEc-------C-CceeEEEE--cC--Ce-EEEEE--CCeEEEEEC---C----CCeeeeeecCCCCCceEEEEeeC
Q 019672 87 ALRELNF-------L-TSILAVRL--NK--KR-LVIVL--REKTYIYDA---N----TLAILDTIDTVPNLKGLCAFSPS 144 (337)
Q Consensus 87 ~~~~~~~-------~-~~v~~i~~--~~--~~-~~v~~--d~~i~i~d~---~----~~~~~~~~~~~~~~~~~~~~~~~ 144 (337)
+..+.. . ..+..+++ ++ .. .+++. ++.+..|++ . +.+.++++....++.+ | ..+
T Consensus 113 -l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~Eg-c--vvD 188 (355)
T 3amr_A 113 -LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMNSQTEG-M--AAD 188 (355)
T ss_dssp -EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEE-E--EEE
T ss_pred -eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCCCCcce-E--EEc
Confidence 444421 1 34556666 54 22 23334 678888888 2 3366777776654433 2 334
Q ss_pred CCccEEEEcCCCCccEEEEEEcc-----CCcccc-------cCceEEEEe--CCCCC-EEEEEeCCCcEEEEEEcC-CCc
Q 019672 145 LNACFLAVPASTTKGSVLVYNVM-----ELHSHC-------EAPLAAIVL--SSNGM-YIATASEQGTIIRVFLVS-EAT 208 (337)
Q Consensus 145 ~~~~~la~~~~~~dg~v~i~d~~-----~~~~~~-------~~~i~~~~~--s~dg~-~lat~s~dg~~i~vwd~~-~~~ 208 (337)
+....|..+- ++.-|..+|.. +.+.+. ...+..|++ .++|+ +|+++|+....+.|||.+ +.+
T Consensus 189 d~~g~Lyv~e--Ed~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~ 266 (355)
T 3amr_A 189 DEYGRLYIAE--EDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNK 266 (355)
T ss_dssp TTTTEEEEEE--TTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCC
T ss_pred CCCCeEEEec--ccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCc
Confidence 4455666655 45557777754 222221 146888888 66777 777777433336799997 677
Q ss_pred eeEeec
Q 019672 209 KSYSFR 214 (337)
Q Consensus 209 ~~~~~~ 214 (337)
.+..|+
T Consensus 267 ~vg~f~ 272 (355)
T 3amr_A 267 YVADFR 272 (355)
T ss_dssp EEEEEE
T ss_pred EEEEEE
Confidence 777774
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.78 E-value=0.022 Score=52.29 Aligned_cols=232 Identities=10% Similarity=0.087 Sum_probs=124.1
Q ss_pred eEEEEEcCC--CCEEEEEc-CCceEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCc-eEEEEECCC
Q 019672 10 VFFVSFNQD--NSGFALST-KDGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPR-RLCLFNTTT 84 (337)
Q Consensus 10 v~~~~fs~d--g~~la~g~-~~g~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~-~v~iwd~~~ 84 (337)
-..++|+|+ +..|.++. ...++.++..+++...... ......+.+..+.+ +.++..+. ..+. .+...+...
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~~~~P~giavd~dG~-lyVad~~~---~~~~~gv~~~~~~~ 216 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTNIGQCADVNFTLNGD-MVVVDDQS---SDTNTGIYLFTRAS 216 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCCCSCEEEEEECTTCC-EEEEECCS---CTTSEEEEEECGGG
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecCCCCccEEEECCCCC-EEEEcCCC---CcccceEEEEECCC
Confidence 458899985 34444443 3567888987776644332 23345566666666 33332210 0111 233333222
Q ss_pred CCE-EEEEEcCCceeEEEEcC-C-eEEEEE--CCeEEEEECCCCeeeeee-cCCCCCceEEEEeeCCCccEEEEcCCCCc
Q 019672 85 GTA-LRELNFLTSILAVRLNK-K-RLVIVL--REKTYIYDANTLAILDTI-DTVPNLKGLCAFSPSLNACFLAVPASTTK 158 (337)
Q Consensus 85 ~~~-~~~~~~~~~v~~i~~~~-~-~~~v~~--d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~~d 158 (337)
+.. ...+..-.....+++++ + .++++. .+.|+.+|..++.....+ .....+ ....++.+|++..|..+.. ..
T Consensus 217 ~~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~-~~~~ia~dpdG~~LYvad~-~~ 294 (433)
T 4hw6_A 217 GFTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDTKG-SNFHIVWHPTGDWAYIIYN-GK 294 (433)
T ss_dssp TTCCEEEEEECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSCCS-SCEEEEECTTSSEEEEEET-TT
T ss_pred CeeccccccccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCCCC-CcccEEEeCCCCEEEEEeC-CC
Confidence 211 01121122345567776 4 455554 568999998766552222 211111 1224566677765544443 46
Q ss_pred cEEEEEEccC--Cccc----------------------ccCceEEEEe---------CCCCCEEEEEeCCCcEEEEEEcC
Q 019672 159 GSVLVYNVME--LHSH----------------------CEAPLAAIVL---------SSNGMYIATASEQGTIIRVFLVS 205 (337)
Q Consensus 159 g~v~i~d~~~--~~~~----------------------~~~~i~~~~~---------s~dg~~lat~s~dg~~i~vwd~~ 205 (337)
+.|..+|... +... .-.....+++ .++|.+.++-...++ |+.++.
T Consensus 295 ~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~-I~~~~~- 372 (433)
T 4hw6_A 295 HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHT-VRVLTP- 372 (433)
T ss_dssp TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTE-EEEECT-
T ss_pred CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCE-EEEECC-
Confidence 8899988642 2110 0033567999 788876666555544 788884
Q ss_pred CCceeEeeccCC------cc---------eeEEEEEee-cCCCcccEEEEEeCCCcEEEEecC
Q 019672 206 EATKSYSFRRGT------YP---------STIFSLSFG-QSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 206 ~~~~~~~~~~~~------~~---------~~i~~l~fs-~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
+|........+. .. .....|+++ ++|. ++++-...+.|+.++++
T Consensus 373 ~G~v~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~---lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 373 EGRVTTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKC---FYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp TSEEEEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTE---EEEEEGGGTEEEEEEEC
T ss_pred CCCEEEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCE---EEEEeCCCCEEEEEecC
Confidence 564432221110 00 126789999 6776 67766777889888764
No 268
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.75 E-value=0.022 Score=51.39 Aligned_cols=230 Identities=5% Similarity=-0.067 Sum_probs=129.2
Q ss_pred EEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEE
Q 019672 11 FFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALR 89 (337)
Q Consensus 11 ~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~ 89 (337)
+|.+..+ ..+|+.+....++..++++.+...... .....-+++.+..+.+.++.. ..+.|..+++..+....
T Consensus 80 ~C~~~~~-~~~l~~~~~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~~~ 152 (386)
T 3v65_B 80 SCKALGP-EPVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNVEE 152 (386)
T ss_dssp CEEECSS-CCEEEEECBSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCCEEE
T ss_pred eECCccc-cceeEeecCccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeC------CCCcEEEEecCCCCcEE
Confidence 3555455 345556666678778877654432222 233444555555566666554 46789999988765433
Q ss_pred EEEcC-CceeEEEEc--CCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEE
Q 019672 90 ELNFL-TSILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVY 164 (337)
Q Consensus 90 ~~~~~-~~v~~i~~~--~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~ 164 (337)
.+... .....++++ ...++++. .+.|.+.++........+... ......++.+|.+..|..+.....+.|..+
T Consensus 153 ~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~--l~~P~giavdp~~g~ly~td~~~~~~I~r~ 230 (386)
T 3v65_B 153 VVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS--LEKPRAIALHPMEGTIYWTDWGNTPRIEAS 230 (386)
T ss_dssp EECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS--CSCEEEEEEETTTTEEEEEECSSSCEEEEE
T ss_pred EEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC--CCCCcEEEEEcCCCeEEEeccCCCCEEEEE
Confidence 33221 234456665 45566665 568888887644322222211 112234455554445555443122788888
Q ss_pred EccCCccc---cc--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEE
Q 019672 165 NVMELHSH---CE--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVA 239 (337)
Q Consensus 165 d~~~~~~~---~~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las 239 (337)
++...... .. ...+.|+|+|++..|..+......|..+|+........+..+ ......|++ ..+. ++.+
T Consensus 231 ~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~~~~~~~~~--~~~P~giav-~~~~---ly~t 304 (386)
T 3v65_B 231 SMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHRKAVISQG--LPHPFAITV-FEDS---LYWT 304 (386)
T ss_dssp ETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCSCEEEECSS--CSSEEEEEE-ETTE---EEEE
T ss_pred eCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCeeEEEEECC--CCCceEEEE-ECCE---EEEe
Confidence 87643221 11 457899999877777666655445788887643322222211 123567787 3455 6777
Q ss_pred EeCCCcEEEEecCCCc
Q 019672 240 TSSSGSLHVFSPGFAI 255 (337)
Q Consensus 240 ~s~dg~v~iw~l~~~~ 255 (337)
-...+.|..++..++.
T Consensus 305 d~~~~~V~~~~~~~G~ 320 (386)
T 3v65_B 305 DWHTKSINSANKFTGK 320 (386)
T ss_dssp ETTTTEEEEEETTTCC
T ss_pred eCCCCeEEEEECCCCc
Confidence 7778889888854443
No 269
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.66 E-value=0.00088 Score=66.25 Aligned_cols=114 Identities=8% Similarity=0.077 Sum_probs=74.7
Q ss_pred eEEEEeeC-CCccEEEEcCCC---CccEEEEEEccCC-ccccc---CceEEEEeCCCCCEEEEEeCCC----cEEEEEEc
Q 019672 137 GLCAFSPS-LNACFLAVPAST---TKGSVLVYNVMEL-HSHCE---APLAAIVLSSNGMYIATASEQG----TIIRVFLV 204 (337)
Q Consensus 137 ~~~~~~~~-~~~~~la~~~~~---~dg~v~i~d~~~~-~~~~~---~~i~~~~~s~dg~~lat~s~dg----~~i~vwd~ 204 (337)
.+.+.+++ ||+.++|+.... ...+|+++|+.++ +.+.. .....++|+|||+.|+..+.|. ..|.++++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~l 254 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHVM 254 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEET
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEEC
Confidence 45667788 899988876421 1235999999988 53221 2245689999999888887652 23577888
Q ss_pred CCCce--eEeeccCCcceeEEEEEeecCCCcccEEEEEeCC---CcEEEEecCCC
Q 019672 205 SEATK--SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS---GSLHVFSPGFA 254 (337)
Q Consensus 205 ~~~~~--~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d---g~v~iw~l~~~ 254 (337)
.+++. ...+... ...-..++.|||||+ +|+..+.+ ..|.++|+.++
T Consensus 255 gt~~~~~~lv~~~~-~~~~~~~~~~SpDg~---~l~~~~~~~~~~~l~~~d~~~~ 305 (751)
T 2xe4_A 255 GKLQSEDVCLYEEH-NPLFSAFMYKAADTN---TLCIGSQSPETAEVHLLDLRKG 305 (751)
T ss_dssp TSCGGGCEEEEECC-CTTCEEEEEECTTSS---EEEEEEECSSCEEEEEEESSSC
T ss_pred CCCchhcEEEEecC-CCceEEEEEECCCCC---EEEEEecCCCCceEEEEECCCC
Confidence 77642 1222211 122356789999999 77766633 35788888764
No 270
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.62 E-value=0.016 Score=50.67 Aligned_cols=170 Identities=11% Similarity=0.097 Sum_probs=98.5
Q ss_pred CCceEEEEECCCCCEEEEEEc---------------------CCceeEEEEcC--CeEEEEE-CCeEEEEECCCCeeeee
Q 019672 73 SPRRLCLFNTTTGTALRELNF---------------------LTSILAVRLNK--KRLVIVL-REKTYIYDANTLAILDT 128 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~---------------------~~~v~~i~~~~--~~~~v~~-d~~i~i~d~~~~~~~~~ 128 (337)
.++.|..||..+++.. .+.. ...+.++++++ ..++++. .+.+..+|..+++. ..
T Consensus 38 ~~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d~~~~i~~~d~~~g~~-~~ 115 (322)
T 2fp8_A 38 QDGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVDCYYHLSVVGSEGGHA-TQ 115 (322)
T ss_dssp TTSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEETTTEEEEECTTCEEC-EE
T ss_pred CCCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEECCCCEEEEeCCCCEE-EE
Confidence 3678888988765533 2221 12467888875 4577775 55688888765532 22
Q ss_pred ecCC-C--CCceEEEEeeCC-CccEEEEcCC---------------CCccEEEEEEccCCcccc----cCceEEEEeCCC
Q 019672 129 IDTV-P--NLKGLCAFSPSL-NACFLAVPAS---------------TTKGSVLVYNVMELHSHC----EAPLAAIVLSSN 185 (337)
Q Consensus 129 ~~~~-~--~~~~~~~~~~~~-~~~~la~~~~---------------~~dg~v~i~d~~~~~~~~----~~~i~~~~~s~d 185 (337)
+... . .......+..++ ++.+.++... ..+|.|..||..+++... ....+.++++|+
T Consensus 116 ~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~~~~p~gia~~~d 195 (322)
T 2fp8_A 116 LATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKELHVPGGAEVSAD 195 (322)
T ss_dssp EESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEEESCCCEEEECTT
T ss_pred ecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccCCccCcceEECCC
Confidence 2111 1 011234556667 6665554321 024778889986654321 145678999999
Q ss_pred CCEEEEE-eCCCcEEEEEEcCCCc--eeEeeccCCcceeEEEEEeecCCCcccEEEEEeC----------CCcEEEEec
Q 019672 186 GMYIATA-SEQGTIIRVFLVSEAT--KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS----------SGSLHVFSP 251 (337)
Q Consensus 186 g~~lat~-s~dg~~i~vwd~~~~~--~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~----------dg~v~iw~l 251 (337)
|++|..+ +..+. |.+|++.... ....+.. ... ...+++.++|. ++++... .+.|..+|.
T Consensus 196 g~~lyv~d~~~~~-I~~~~~~~~~~~~~~~~~~--~~g-P~gi~~d~~G~---l~va~~~~~~~~~~~~~~~~v~~~d~ 267 (322)
T 2fp8_A 196 SSFVLVAEFLSHQ-IVKYWLEGPKKGTAEVLVK--IPN-PGNIKRNADGH---FWVSSSEELDGNMHGRVDPKGIKFDE 267 (322)
T ss_dssp SSEEEEEEGGGTE-EEEEESSSTTTTCEEEEEE--CSS-EEEEEECTTSC---EEEEEEEETTSSTTSCEEEEEEEECT
T ss_pred CCEEEEEeCCCCe-EEEEECCCCcCCccceEEe--CCC-CCCeEECCCCC---EEEEecCcccccccCCCccEEEEECC
Confidence 9866555 44455 6788887421 1111211 112 56789999998 6666544 355777764
No 271
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.62 E-value=0.039 Score=50.54 Aligned_cols=234 Identities=7% Similarity=0.009 Sum_probs=122.5
Q ss_pred CeEEEEEcC-CCCEEEEEc-CCceEEEeCCCCcEEEEE-eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC
Q 019672 9 PVFFVSFNQ-DNSGFALST-KDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG 85 (337)
Q Consensus 9 ~v~~~~fs~-dg~~la~g~-~~g~~vw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~ 85 (337)
.-..++|+| ++..|.+.. ...++++|++++++..-. .......+++..+.+.+.++..+.. .....+...+. .+
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~~~~P~~ia~d~~G~~lyvad~~~~--~~~~~v~~~~~-~g 214 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSGLSKVRTICWTHEADSMIITNDQNN--NDRPNNYILTR-ES 214 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECCCSCEEEEEECTTSSEEEEEECCSC--TTSEEEEEEEG-GG
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecCCCCcceEEEeCCCCEEEEEeCCCC--cccceEEEEeC-CC
Confidence 346789998 344454443 355788898876654322 2233455666666675554443100 01123333343 23
Q ss_pred CEE--EEEEcCCceeEEEEcC-C-eEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCcc
Q 019672 86 TAL--RELNFLTSILAVRLNK-K-RLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKG 159 (337)
Q Consensus 86 ~~~--~~~~~~~~v~~i~~~~-~-~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg 159 (337)
... ..+.......++++++ + .++++. .+.|..++...+.......... ...-..++.+|++.+|..+.. ..+
T Consensus 215 ~~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~~lyv~d~-~~~ 292 (430)
T 3tc9_A 215 GFKVITELTKGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGNYAYIVVV-NQH 292 (430)
T ss_dssp TSCSEEEEEECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSS-SSCCEEEEECTTSSEEEEEET-TTT
T ss_pred ceeeeeeeccCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCCEEEEEEC-CCC
Confidence 221 2222223345677877 4 455554 6799999998765422222111 112234566677775544443 478
Q ss_pred EEEEEEccCC--cc-----c-----------------ccCceE-EEEeC--------CCCCEEEEEeCCCcEEEEEEcCC
Q 019672 160 SVLVYNVMEL--HS-----H-----------------CEAPLA-AIVLS--------SNGMYIATASEQGTIIRVFLVSE 206 (337)
Q Consensus 160 ~v~i~d~~~~--~~-----~-----------------~~~~i~-~~~~s--------~dg~~lat~s~dg~~i~vwd~~~ 206 (337)
.|..++.... .. . .-.... .+++. ++|.+.++=...++ |+.++ .+
T Consensus 293 ~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~~gv~v~~~~y~~~D~~g~lyvaD~~n~~-I~~i~-~~ 370 (430)
T 3tc9_A 293 YILRSDYDWKTKRLTTPYIVCGQQGAKDWVDGVGKKARMHAPRQGTFVKNPAYKGSSDEYDFYFCDRENHC-IRILT-PQ 370 (430)
T ss_dssp EEEEEEEETTTTEECCCEEEEECTTCBCCBCEEGGGCBBSSEEEEEEEECGGGTTSSCCEEEEEEEGGGTE-EEEEC-TT
T ss_pred EEEEEeCCcccccccceEEEeccCCCCCCCCCCCcceEeCCCcceEEEccccccccCCCCeEEEEECCCcE-EEEEC-CC
Confidence 8999876521 10 0 001122 55553 45665555444444 68888 45
Q ss_pred CceeEeecc------CC-c--------ceeEEEEEeecC-CCcccEEEEEeCCCcEEEEecC
Q 019672 207 ATKSYSFRR------GT-Y--------PSTIFSLSFGQS-MQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 207 ~~~~~~~~~------~~-~--------~~~i~~l~fs~d-g~~~~~las~s~dg~v~iw~l~ 252 (337)
|+....... +. . -.....|+++|+ +. ++++-...+.|+.++++
T Consensus 371 G~v~~~~g~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~---lyVaD~~n~rIr~i~~e 429 (430)
T 3tc9_A 371 GRVTTFAGRGSNGTSGYNDGDLRQEARFNHPEGIVYDEEREC---FFIGDRENRRIRKIGYE 429 (430)
T ss_dssp SEEEEEEECCTTSSSSCBCEETTTTCBCSSEEEEEEETTTTE---EEEEEGGGTEEEEEEEC
T ss_pred CcEEEEEeCCCCCCCcccCCCchhhcEeCCCcEEEEECCCCE---EEEEECCCCeEEEEccC
Confidence 654332221 10 0 013678999994 65 66666667788888764
No 272
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=97.60 E-value=0.0043 Score=56.19 Aligned_cols=141 Identities=15% Similarity=0.201 Sum_probs=92.2
Q ss_pred EcCCeEEEEECCeEEEEECCCCeeeeeecCCC--CCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCc---c-----
Q 019672 102 LNKKRLVIVLREKTYIYDANTLAILDTIDTVP--NLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH---S----- 171 (337)
Q Consensus 102 ~~~~~~~v~~d~~i~i~d~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~---~----- 171 (337)
-+...++++.++.||.-++......+.+..+. ....+.-+..+|.+.+||..| +.+|.|..+..+. .
T Consensus 30 ~n~t~i~~a~~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g---~~~V~Vv~LP~~~~~~~~~~~~ 106 (452)
T 3pbp_A 30 QNGTRIVFIQDNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN---DNEIFVMEVPWGYSNVEDVSIQ 106 (452)
T ss_dssp TTTTEEEEEETTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEEC---SSEEEEEECCTTCSCCCCHHHH
T ss_pred cCCCEEEEEECCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEec---CCeEEEEEecCccccCcccccc
Confidence 35667888889999999987544444444431 111233456677888999987 5789998876221 0
Q ss_pred --c-------------ccCceEEEEeCCC---CCEEEEEeCCCcEEEEEEcCCCce-eEeeccC-------CcceeEEEE
Q 019672 172 --H-------------CEAPLAAIVLSSN---GMYIATASEQGTIIRVFLVSEATK-SYSFRRG-------TYPSTIFSL 225 (337)
Q Consensus 172 --~-------------~~~~i~~~~~s~d---g~~lat~s~dg~~i~vwd~~~~~~-~~~~~~~-------~~~~~i~~l 225 (337)
. ...+|..+.|+|- |..|++-.+|++ ||+||+..... ...+.+. .....|.++
T Consensus 107 ~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~-Ir~yDl~~s~~~P~~L~k~~~~fg~d~~~~ev~S~ 185 (452)
T 3pbp_A 107 DAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDT-ITMFDILNSQEKPIVLNKPNNSFGLDARVNDITDL 185 (452)
T ss_dssp HTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSC-EEEEETTCTTSCCEEESCCCSEEESCSSCCCEEEE
T ss_pred cccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCE-EEEEEcccCCCCCcchhccccccCCCcccceEEEE
Confidence 0 0256999999994 568999999987 79999985321 1123211 111458999
Q ss_pred EeecCCCcccEEEEEe--CCCcEEEE
Q 019672 226 SFGQSMQFQDILVATS--SSGSLHVF 249 (337)
Q Consensus 226 ~fs~dg~~~~~las~s--~dg~v~iw 249 (337)
+|++++- .|-..+ ..|.|+-.
T Consensus 186 ~Fg~~~l---TLYvl~~t~~GDIYAl 208 (452)
T 3pbp_A 186 EFSKDGL---TLYCLNTTEGGDIFAF 208 (452)
T ss_dssp EECTTSS---CEEEEECTTSCEEEEE
T ss_pred EEcCCCc---EEEEEecCCCCCEEEE
Confidence 9999775 565544 77877544
No 273
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.59 E-value=0.038 Score=49.81 Aligned_cols=171 Identities=11% Similarity=-0.035 Sum_probs=100.3
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcC--CeEEEEE--CCeEEEEECCCCeeeeeecCC-CCCceEEEEeeCCCcc
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTV-PNLKGLCAFSPSLNAC 148 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 148 (337)
.+.|+..++..+...........+.++++++ +.++++. .+.|+.+++........+... ..+.+ +++. +.+.
T Consensus 95 ~~~I~~i~~~~~~~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~g-lavd--~~~g 171 (386)
T 3v65_B 95 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGG-LAVD--WVHD 171 (386)
T ss_dssp BSCEEEECTTSCCCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCC-EEEE--TTTT
T ss_pred CccceeeccCCCcEEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccE-EEEE--eCCC
Confidence 4678888887766554444445678888874 4566665 578999998765433333222 12333 3444 3233
Q ss_pred EEEEcCCCCccEEEEEEccCCccc---cc--CceEEEEeCCCCCEEEEEe-CC-CcEEEEEEcCCCceeEeeccCCccee
Q 019672 149 FLAVPASTTKGSVLVYNVMELHSH---CE--APLAAIVLSSNGMYIATAS-EQ-GTIIRVFLVSEATKSYSFRRGTYPST 221 (337)
Q Consensus 149 ~la~~~~~~dg~v~i~d~~~~~~~---~~--~~i~~~~~s~dg~~lat~s-~d-g~~i~vwd~~~~~~~~~~~~~~~~~~ 221 (337)
.|..+.. ..+.|.+.++...... .. ...+.++++|.+..|..+. .. +. |..+++..... ..+... .-..
T Consensus 172 ~lY~~d~-~~~~I~~~~~dg~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~-I~r~~~dG~~~-~~~~~~-~~~~ 247 (386)
T 3v65_B 172 KLYWTDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDGSGR-RIIADT-HLFW 247 (386)
T ss_dssp EEEEEET-TTTEEEECBTTSCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCSC-EEEECS-SCSC
T ss_pred eEEEEcC-CCCeEEEEeCCCCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCE-EEEEeCCCCCc-EEEEEC-CCCC
Confidence 3333332 3678888887643221 11 5678999999766555444 33 44 56777754322 222111 1123
Q ss_pred EEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 222 IFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 222 i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
...|+|+|++. .++.+-+..+.|..++++.
T Consensus 248 PnGlavd~~~~--~lY~aD~~~~~I~~~d~dG 277 (386)
T 3v65_B 248 PNGLTIDYAGR--RMYWVDAKHHVIERANLDG 277 (386)
T ss_dssp EEEEEEEGGGT--EEEEEETTTTEEEEECTTS
T ss_pred eeeEEEeCCCC--EEEEEECCCCEEEEEeCCC
Confidence 57899998666 2555656678899999864
No 274
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.53 E-value=0.015 Score=57.31 Aligned_cols=238 Identities=10% Similarity=-0.039 Sum_probs=119.6
Q ss_pred CeEEEEEc-CCCCEEEEEcCC------ceEEEeCCCC-cEEEE-EeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEE
Q 019672 9 PVFFVSFN-QDNSGFALSTKD------GFKIFDSSTG-RLCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCL 79 (337)
Q Consensus 9 ~v~~~~fs-~dg~~la~g~~~------g~~vw~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~i 79 (337)
.+...+|| |||++||-+.+. .++++|++++ +.+.. ... ......+.+++..++++..... .....|.+
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-~~~~~~WspDg~~l~y~~~d~~--~~~~~v~~ 251 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-TNGEIVWGPDHTSLFYVTKDET--LRENKVWR 251 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-ECSCCEECSSTTEEEEEEECTT--CCEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-ceeeEEEecCCCEEEEEEECCC--CCCCEEEE
Confidence 47789999 999998855432 2688899998 63211 110 0122456677778877764210 01247888
Q ss_pred EECCCCCE--EEEEEc--CCceeEEEEcCCe--EEEEE----CCeEEEEECCCCe-ee--eeecCCCCCceEEEEeeCCC
Q 019672 80 FNTTTGTA--LRELNF--LTSILAVRLNKKR--LVIVL----REKTYIYDANTLA-IL--DTIDTVPNLKGLCAFSPSLN 146 (337)
Q Consensus 80 wd~~~~~~--~~~~~~--~~~v~~i~~~~~~--~~v~~----d~~i~i~d~~~~~-~~--~~~~~~~~~~~~~~~~~~~~ 146 (337)
+++.+++. ...+.. ..-...+.+++++ +++.. ...|+++|+.++. .. ..+... .........++..
T Consensus 252 ~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~-~~~~~~s~~~~~g 330 (751)
T 2xe4_A 252 HVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPR-EKGVRYDVQMHGT 330 (751)
T ss_dssp EETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCC-CTTCCEEEEEETT
T ss_pred EECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecC-CCCceEEEeeeeC
Confidence 99987642 222222 2235567788765 44433 3378899997652 12 233211 1111223331222
Q ss_pred ccEEEEcCCC--CccEEEEEEccCC---cc-c--ccC--ceEEEEeCCCCCEEEEEeCCCcE-EEEEEc-------CCCc
Q 019672 147 ACFLAVPAST--TKGSVLVYNVMEL---HS-H--CEA--PLAAIVLSSNGMYIATASEQGTI-IRVFLV-------SEAT 208 (337)
Q Consensus 147 ~~~la~~~~~--~dg~v~i~d~~~~---~~-~--~~~--~i~~~~~s~dg~~lat~s~dg~~-i~vwd~-------~~~~ 208 (337)
+.+++..... ....|..+|+.+. +. + +.. .+..+.+. .+.++++...+|.. |.++|+ .+++
T Consensus 331 ~~l~~~t~~~~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~-~~~lv~~~~~~g~~~l~~~dl~~~~~~~~~g~ 409 (751)
T 2xe4_A 331 SHLVILTNEGGAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR-SNYLVVAGRRAGLTRIWTMMADSQDGVFKAGT 409 (751)
T ss_dssp TEEEEEECTTTCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC-SSEEEEEEEETTEEEEEEEECCTTTSCCCTTT
T ss_pred CEEEEEeCCCCCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE-CCEEEEEEEeCCEEEEEEEecccccccccCCc
Confidence 3333333321 2346777787642 22 2 112 35556665 23455666677742 345665 3443
Q ss_pred eeEeeccCCcceeEEEEEe----ecCCCcccEEEEEeCC---CcEEEEecCCC
Q 019672 209 KSYSFRRGTYPSTIFSLSF----GQSMQFQDILVATSSS---GSLHVFSPGFA 254 (337)
Q Consensus 209 ~~~~~~~~~~~~~i~~l~f----s~dg~~~~~las~s~d---g~v~iw~l~~~ 254 (337)
.+..+.... ...+..+.+ ++++. .++++.+.. ..+..+|+.++
T Consensus 410 ~~~~l~l~~-~~~~~~~~~~~~~~~~~~--~l~~~~ss~~~P~~~~~~d~~~~ 459 (751)
T 2xe4_A 410 GLREVVMEE-PIFTVHLVESQMLEYEEP--TFRMEYSSLATPNTWFDVSPQDH 459 (751)
T ss_dssp CCEECCCCC-SSCEEEECGGGCCCTTCS--CEEEEEEETTEEEEEEEECTTTC
T ss_pred cceEECCCC-ceeEEEeccCcccCCCCC--EEEEEEeCCCCCCEEEEEECCCC
Confidence 133332111 112333433 34655 255555444 34666666544
No 275
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.50 E-value=0.054 Score=49.11 Aligned_cols=224 Identities=7% Similarity=-0.045 Sum_probs=126.3
Q ss_pred CEEEEEcCCceEEEeCCCCcEEEEE-eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCC----CEEEEEE-c
Q 019672 20 SGFALSTKDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTG----TALRELN-F 93 (337)
Q Consensus 20 ~~la~g~~~g~~vw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~----~~~~~~~-~ 93 (337)
.+|+.+....++..++++....... ......-+++.+..+.+.++.. ..+.|..+++... .....+. .
T Consensus 84 ~~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~------~~~~I~~~~~~g~~~~~~~~~~~~~~ 157 (400)
T 3p5b_L 84 AYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRD 157 (400)
T ss_dssp CEEEEEETTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC------CCCEEEECSS
T ss_pred ceeEEeccceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEec------CCCeEEEEEcccCCCCCcceEEEeCC
Confidence 3566666677888888766433222 2234444555555666666654 3678888888652 1222222 1
Q ss_pred CCceeEEEEc--CCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCC
Q 019672 94 LTSILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMEL 169 (337)
Q Consensus 94 ~~~v~~i~~~--~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~ 169 (337)
.....+++++ .+.++++. .+.|.+.++........+.... ....+++.+|.+..|..+.....+.|...++...
T Consensus 158 ~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~--~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~ 235 (400)
T 3p5b_L 158 IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV 235 (400)
T ss_dssp CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECSS--CCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC
T ss_pred CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCCC--CCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC
Confidence 2345677776 45666665 5689999987553332232111 1233445555444555443212467888887643
Q ss_pred ccc---cc--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-CcceeEEEEEeecCCCcccEEEEEeCC
Q 019672 170 HSH---CE--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSS 243 (337)
Q Consensus 170 ~~~---~~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-~~~~~i~~l~fs~dg~~~~~las~s~d 243 (337)
... .. ...+.|+++|++..|..+......|..+|+..... ..+... ........|++. .+. ++.+-...
T Consensus 236 ~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~l~~P~gl~v~-~~~---lywtd~~~ 310 (400)
T 3p5b_L 236 DIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVF-EDK---VFWTDIIN 310 (400)
T ss_dssp SCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCC-EEEEECSSTTSSEEEEEEE-TTE---EEEEESSS
T ss_pred ccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCCcc-EEEEeCCCCCCCCEEEEEe-CCE---EEEecCCC
Confidence 321 11 56789999998887777765544578889864332 233211 111224567774 344 67777777
Q ss_pred CcEEEEecCCCcc
Q 019672 244 GSLHVFSPGFAIN 256 (337)
Q Consensus 244 g~v~iw~l~~~~~ 256 (337)
+.|..++..+++.
T Consensus 311 ~~V~~~~~~~G~~ 323 (400)
T 3p5b_L 311 EAIFSANRLTGSD 323 (400)
T ss_dssp CSEEEEESSSCCC
T ss_pred CeEEEEEcCCCCc
Confidence 8899998655543
No 276
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.49 E-value=0.048 Score=48.42 Aligned_cols=231 Identities=5% Similarity=-0.088 Sum_probs=130.6
Q ss_pred CeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE
Q 019672 9 PVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA 87 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~ 87 (337)
.-+|.+..++ .+|..+....++..+++......... .....-+++.+..+.+.++.. ..+.|..+++..+..
T Consensus 35 ~~~C~~~~~~-~~ll~~~~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~------~~~~I~r~~~~g~~~ 107 (349)
T 3v64_C 35 RRSCKALGPE-PVLLFANRIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDV------TLDRILRANLNGSNV 107 (349)
T ss_dssp SSCEEESSSC-CEEEEECBSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSC
T ss_pred CCcccccccC-ceeEeecccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEec------cCCceEEEecCCCCc
Confidence 3456666663 34555555667777776654432222 233344455555566666554 367899999876653
Q ss_pred EEEEEcC-CceeEEEEc--CCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCc-cEE
Q 019672 88 LRELNFL-TSILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTK-GSV 161 (337)
Q Consensus 88 ~~~~~~~-~~v~~i~~~--~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~d-g~v 161 (337)
...+... ....+++++ ...++++. .+.|.+.++........+... .....+++.+|.+..|..+.. .. +.|
T Consensus 108 ~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~--l~~P~~iavdp~~g~ly~td~-~~~~~I 184 (349)
T 3v64_C 108 EEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS--LEKPRAIALHPMEGTIYWTDW-GNTPRI 184 (349)
T ss_dssp EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECTT--CSCEEEEEEETTTTEEEEEEC-SSSCEE
T ss_pred eEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEeCC--CCCcceEEEecCcCeEEEecc-CCCCEE
Confidence 3322221 234566765 45566665 568999998654322222211 112234455554445554443 24 788
Q ss_pred EEEEccCCccc---cc--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccE
Q 019672 162 LVYNVMELHSH---CE--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDI 236 (337)
Q Consensus 162 ~i~d~~~~~~~---~~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~ 236 (337)
..+++...... .. ...+.|+++|++..|..+......|..+|+..... ..+.... ......|++. ++. .
T Consensus 185 ~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~~-~~~~~~~-~~~P~giav~-~~~---l 258 (349)
T 3v64_C 185 EASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSHR-KAVISQG-LPHPFAITVF-EDS---L 258 (349)
T ss_dssp EEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSS-CSSEEEEEEE-TTE---E
T ss_pred EEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCce-EEEEeCC-CCCceEEEEE-CCE---E
Confidence 88887643221 11 45789999997777766665544578889764332 2221111 1234677773 455 6
Q ss_pred EEEEeCCCcEEEEecCCCc
Q 019672 237 LVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 237 las~s~dg~v~iw~l~~~~ 255 (337)
+.+-...+.|..++..+++
T Consensus 259 y~td~~~~~V~~~~~~~G~ 277 (349)
T 3v64_C 259 YWTDWHTKSINSANKFTGK 277 (349)
T ss_dssp EEEETTTTEEEEEETTTCC
T ss_pred EEecCCCCeEEEEEccCCC
Confidence 7777777888888854443
No 277
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.48 E-value=0.023 Score=49.30 Aligned_cols=168 Identities=10% Similarity=0.102 Sum_probs=97.3
Q ss_pred CCceEEEEECCCCCEEEEEEcCCceeEEEEcCCe-EEEEE--CC--eEEEEECCCCeeeeeecCCCCCceEEEEeeCCCc
Q 019672 73 SPRRLCLFNTTTGTALRELNFLTSILAVRLNKKR-LVIVL--RE--KTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNA 147 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~-~~v~~--d~--~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (337)
..++|..||... +....+........++++++. ++++. .+ .|..+|..+++........ .....-.....+++
T Consensus 51 ~~~~I~~~d~~g-~~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~~~~~~~~-~~~~~~g~~~~~~~ 128 (306)
T 2p4o_A 51 EVGEIVSITPDG-NQQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTVETLLTLP-DAIFLNGITPLSDT 128 (306)
T ss_dssp TTTEEEEECTTC-CEEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCEEEEEECT-TCSCEEEEEESSSS
T ss_pred CCCeEEEECCCC-ceEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeEEEEEeCC-CccccCcccccCCC
Confidence 367899999875 445555566678889997654 55554 22 4777787777653322221 11111222223334
Q ss_pred cEEEEcCCCCccEEEEEEccCCc--cc------------cc-CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCC-Cce--
Q 019672 148 CFLAVPASTTKGSVLVYNVMELH--SH------------CE-APLAAIVLSSNGMYIATASEQGTIIRVFLVSE-ATK-- 209 (337)
Q Consensus 148 ~~la~~~~~~dg~v~i~d~~~~~--~~------------~~-~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~-~~~-- 209 (337)
..+++.. .++.|.++|...++ .. .. ...+.+ +|||++|..+......|..+|+.. ++.
T Consensus 129 ~~~v~d~--~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~~g~~~~ 204 (306)
T 2p4o_A 129 QYLTADS--YRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL--KRFGNFLYVSNTEKMLLLRIPVDSTDKPGE 204 (306)
T ss_dssp EEEEEET--TTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE--EEETTEEEEEETTTTEEEEEEBCTTSCBCC
T ss_pred cEEEEEC--CCCeEEEEeCCCCcEeEEEECCccccccccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCCCCCCCc
Confidence 3444432 36888888876431 10 00 234555 888887766655444478999864 331
Q ss_pred eEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 210 SYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 210 ~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
...+... .....|+++++|+ ++++....+.|.+++.+
T Consensus 205 ~~~~~~~---~~P~gi~vd~dG~---l~va~~~~~~V~~~~~~ 241 (306)
T 2p4o_A 205 PEIFVEQ---TNIDDFAFDVEGN---LYGATHIYNSVVRIAPD 241 (306)
T ss_dssp CEEEEES---CCCSSEEEBTTCC---EEEECBTTCCEEEECTT
T ss_pred cEEEecc---CCCCCeEECCCCC---EEEEeCCCCeEEEECCC
Confidence 1111111 1134588999998 77777778899999854
No 278
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.46 E-value=0.04 Score=46.66 Aligned_cols=191 Identities=13% Similarity=0.099 Sum_probs=113.4
Q ss_pred CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC--CceeEEEEcCCeEE-EEE--CCeEEEEECC
Q 019672 47 GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL--TSILAVRLNKKRLV-IVL--REKTYIYDAN 121 (337)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~--~~v~~i~~~~~~~~-v~~--d~~i~i~d~~ 121 (337)
....-+.+.++.+.+..+.. .++.|...|.. ++.+..+... ...-+|++.+++.+ ++. ++.+.++++.
T Consensus 27 ~~lSGla~~~~~~~L~aV~d------~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~ 99 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTIN------KPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISLT 99 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEE------TTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEEC
T ss_pred cCcceeEEeCCCCEEEEEEC------CCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEcC
Confidence 34555666666777777776 37899999998 8888888765 46778888665544 554 5688999875
Q ss_pred CCe---eeeeecC----CCCCceEEEEeeCCCccEEEEcCCCCcc-EEEEEEc--cC--Cccc---------ccCceEEE
Q 019672 122 TLA---ILDTIDT----VPNLKGLCAFSPSLNACFLAVPASTTKG-SVLVYNV--ME--LHSH---------CEAPLAAI 180 (337)
Q Consensus 122 ~~~---~~~~~~~----~~~~~~~~~~~~~~~~~~la~~~~~~dg-~v~i~d~--~~--~~~~---------~~~~i~~~ 180 (337)
... .+..+.. .....+.-+++.++.+..|.++.- .+. .|..|+- .+ .... ....+.++
T Consensus 100 ~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E-~~p~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l 178 (255)
T 3qqz_A 100 PNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKE-KNPIEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGA 178 (255)
T ss_dssp TTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEE-SSSEEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEE
T ss_pred CCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEEC-cCCceEEEEcccccCCceeeecchhhccccccCCceeE
Confidence 543 2233321 122234556677766644444331 122 4555541 11 0110 11467899
Q ss_pred EeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeecc--CCcc-----eeEEEEEeecCCCcccEEEEEeCCCcEEEEe
Q 019672 181 VLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRR--GTYP-----STIFSLSFGQSMQFQDILVATSSSGSLHVFS 250 (337)
Q Consensus 181 ~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~--~~~~-----~~i~~l~fs~dg~~~~~las~s~dg~v~iw~ 250 (337)
+++|.-..|..-|.....+-++|.+ |+.+..+.. +.+. ..-..|+|.++|+ ++++ |.-+.+++|.
T Consensus 179 ~~dp~tg~lliLS~~s~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~---lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 179 EFNQQKNTLLVLSHESRALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN---IYIV-SEPNRFYRFT 250 (255)
T ss_dssp EEETTTTEEEEEETTTTEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC---EEEE-ETTTEEEEEE
T ss_pred EEcCCCCeEEEEECCCCeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC---EEEE-cCCceEEEEE
Confidence 9999655555555555556688865 555544432 2111 2357899999998 5555 6667666664
No 279
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.41 E-value=0.056 Score=47.19 Aligned_cols=223 Identities=7% Similarity=-0.060 Sum_probs=124.5
Q ss_pred EEEEEcCCceEEEeCCCCcEEEEE-eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC---CCEEEE-EEcC-
Q 019672 21 GFALSTKDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT---GTALRE-LNFL- 94 (337)
Q Consensus 21 ~la~g~~~g~~vw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~---~~~~~~-~~~~- 94 (337)
+|+.+..+.++..++++.+..... ......-+.+.+..+.+.++.. ..++|..+++.. +..... +...
T Consensus 3 ~ll~~~~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~------~~~~I~~~~~~g~~~~~~~~~~~~~~~ 76 (316)
T 1ijq_A 3 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDI 76 (316)
T ss_dssp EEEEECBSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECSSC
T ss_pred EEEEECCCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEEC------CCCcEEEEECCCCCCCcccEEEEeCCC
Confidence 466677778888898876543322 1233334455555566666554 368999999875 122222 2211
Q ss_pred CceeEEEEc--CCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCc
Q 019672 95 TSILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH 170 (337)
Q Consensus 95 ~~v~~i~~~--~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~ 170 (337)
....+++++ .+.++++. .+.|.++++........+.... .....++.+|.+..+..+.....+.|..+++....
T Consensus 77 ~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~~--~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~~ 154 (316)
T 1ijq_A 77 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 154 (316)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTT--CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECCC--CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCCC
Confidence 244677775 45666665 5789999986543222222111 12234455554444444432123788888875332
Q ss_pred c--cc---cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-CcceeEEEEEeecCCCcccEEEEEeCCC
Q 019672 171 S--HC---EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSSG 244 (337)
Q Consensus 171 ~--~~---~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-~~~~~i~~l~fs~dg~~~~~las~s~dg 244 (337)
. .. -...+.++++|++..|..+......|..+|+... ....+... ........|++. .+. ++.+-...+
T Consensus 155 ~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~-~~~~~~~~~~~~~~P~giav~-~~~---ly~~d~~~~ 229 (316)
T 1ijq_A 155 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG-NRKTILEDEKRLAHPFSLAVF-EDK---VFWTDIINE 229 (316)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC-SCEEEEECTTTTSSEEEEEEE-TTE---EEEEETTTT
T ss_pred eEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC-ceEEEeecCCccCCcEEEEEE-CCE---EEEEECCCC
Confidence 1 11 1567899999987777666654445788998643 22333211 111224667775 455 677777778
Q ss_pred cEEEEecCCCcc
Q 019672 245 SLHVFSPGFAIN 256 (337)
Q Consensus 245 ~v~iw~l~~~~~ 256 (337)
.|..++..+++.
T Consensus 230 ~V~~~~~~~g~~ 241 (316)
T 1ijq_A 230 AIFSANRLTGSD 241 (316)
T ss_dssp EEEEEETTTCCC
T ss_pred eEEEEeCCCCcc
Confidence 899998755543
No 280
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.35 E-value=0.065 Score=46.76 Aligned_cols=171 Identities=11% Similarity=-0.005 Sum_probs=99.8
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcC--CeEEEEE--CCeEEEEECCC----CeeeeeecCC-CCCceEEEEeeC
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANT----LAILDTIDTV-PNLKGLCAFSPS 144 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~----~~~~~~~~~~-~~~~~~~~~~~~ 144 (337)
.+.|+..|+.+++....+..-..+.++.+++ +.++++. .+.|+.+++.. ......+... ..+.+ +++.
T Consensus 9 ~~~I~~i~~~~~~~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~g-lavd-- 85 (316)
T 1ijq_A 9 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG-LAVD-- 85 (316)
T ss_dssp BSSEEEEETTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE-EEEE--
T ss_pred CCeEEEEECCCcceEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCE-EEEe--
Confidence 4679999998877655555455678888874 4566665 57999999875 2222222211 22323 3443
Q ss_pred CCccEEEEcCCCCccEEEEEEccCCccc---c--cCceEEEEeCCCCCEEEEEeC-C-CcEEEEEEcCCCceeEeeccCC
Q 019672 145 LNACFLAVPASTTKGSVLVYNVMELHSH---C--EAPLAAIVLSSNGMYIATASE-Q-GTIIRVFLVSEATKSYSFRRGT 217 (337)
Q Consensus 145 ~~~~~la~~~~~~dg~v~i~d~~~~~~~---~--~~~i~~~~~s~dg~~lat~s~-d-g~~i~vwd~~~~~~~~~~~~~~ 217 (337)
+.+..|..+.. ..+.|.++|+...... . ......++++|++.+|..+.. . +. |...++. |.....+...
T Consensus 86 ~~~~~ly~~d~-~~~~I~~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~-I~~~~~d-G~~~~~~~~~- 161 (316)
T 1ijq_A 86 WIHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLN-GVDIYSLVTE- 161 (316)
T ss_dssp TTTTEEEEEET-TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETT-SCCEEEEECS-
T ss_pred ecCCeEEEEEC-CCCEEEEEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCe-EEEEcCC-CCCeEEEEEC-
Confidence 32223333322 3688999998653221 1 156789999996665544443 2 44 5677764 4433333211
Q ss_pred cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 218 YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 218 ~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
.-.....|+++|++. .++.+-+..+.|..+|++.
T Consensus 162 ~~~~P~gla~d~~~~--~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 162 NIQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp SCSCEEEEEEETTTT--EEEEEETTTTEEEEEETTS
T ss_pred CCCCceEEEEeccCC--EEEEEECCCCeEEEEecCC
Confidence 112367899998776 2555556667899999874
No 281
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.33 E-value=0.014 Score=56.53 Aligned_cols=233 Identities=9% Similarity=0.034 Sum_probs=115.9
Q ss_pred EEEEcC-CCCEEEEEcCC------------ceEEEeCCCCcE--EEEEee-C--CEEEEEEccCCCEEEEEeCCCCCCCC
Q 019672 12 FVSFNQ-DNSGFALSTKD------------GFKIFDSSTGRL--CYERAV-G--AFSIVEMLYSSSLLAIVGAGEQPSLS 73 (337)
Q Consensus 12 ~~~fs~-dg~~la~g~~~------------g~~vw~~~~~~~--~~~~~~-~--~~~~~~~~~~~~~~~~~~~g~~~~~~ 73 (337)
++++.+ +|+.++.|+.+ .+.+||..+++- +..... + ......+..+..++ +++| ..
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~ly-v~GG-----~~ 263 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIV-VTGG-----ND 263 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEE-EECS-----SS
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEE-EeCC-----CC
Confidence 556777 88888877532 247899887642 221111 1 11112333444443 3444 24
Q ss_pred CceEEEEECCCCCEEEEEEcCC---ceeEEEEcCCeEEEEEC--------CeEEEEECCCCeeeeeecC---CCCCceEE
Q 019672 74 PRRLCLFNTTTGTALRELNFLT---SILAVRLNKKRLVIVLR--------EKTYIYDANTLAILDTIDT---VPNLKGLC 139 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~---~v~~i~~~~~~~~v~~d--------~~i~i~d~~~~~~~~~~~~---~~~~~~~~ 139 (337)
++.+.+||..+++....-..+. ....+.+..+.+++.+. +.+.+||..+.+-.. +.. .+-+....
T Consensus 264 ~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W~~-~~~~~~~p~~~~~~ 342 (656)
T 1k3i_A 264 AKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTWTS-LPNAKVNPMLTADK 342 (656)
T ss_dssp TTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEEEE-ETTSCSGGGCCCCT
T ss_pred CCceEEecCcCCceeECCCCCccccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCccee-CCCccccccccccc
Confidence 5689999998876543222222 12233342445555442 469999998764221 110 00000000
Q ss_pred EEeeCCCccEEEEcCCC-------CccEEEEEEccCCccccc--------------CceEEEEeC-CCCCEEEEEeCCC-
Q 019672 140 AFSPSLNACFLAVPAST-------TKGSVLVYNVMELHSHCE--------------APLAAIVLS-SNGMYIATASEQG- 196 (337)
Q Consensus 140 ~~~~~~~~~~la~~~~~-------~dg~v~i~d~~~~~~~~~--------------~~i~~~~~s-~dg~~lat~s~dg- 196 (337)
......++..+++++.+ ....+..||..+..-... ..-.++.|. .+++.++.|+.++
T Consensus 343 ~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~~~~~~~~i~v~GG~~~~ 422 (656)
T 1k3i_A 343 QGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVMYDAVKGKILTFGGSPDY 422 (656)
T ss_dssp TGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEEEETTTTEEEEECCBSSS
T ss_pred cceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEeccCCCCeEEEEeCCCCC
Confidence 00011222233333310 134678888876542110 122444554 4788888887542
Q ss_pred ------c---EEEEEEcCCCceeEee-ccCCcceeEEEEEeecCCCcccEEEEEeCC-----------CcEEEEecCCC
Q 019672 197 ------T---IIRVFLVSEATKSYSF-RRGTYPSTIFSLSFGQSMQFQDILVATSSS-----------GSLHVFSPGFA 254 (337)
Q Consensus 197 ------~---~i~vwd~~~~~~~~~~-~~~~~~~~i~~l~fs~dg~~~~~las~s~d-----------g~v~iw~l~~~ 254 (337)
. .|.+||..+.+-.... ..-.....-.+++..|+|+ +++.|+.+ .++.+||..+.
T Consensus 423 ~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~---i~v~GG~~~~~~~~~~~~~~~v~~ydp~t~ 498 (656)
T 1k3i_A 423 QDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGS---TFITGGQRRGIPFEDSTPVFTPEIYVPEQD 498 (656)
T ss_dssp SSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSC---EEEECCBSBCCTTCCCSBCCCCEEEEGGGT
T ss_pred CCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCC---EEEECCcccCcCcCCCCcccceEEEcCCCC
Confidence 1 3578888776543221 0001111123445668999 88888854 46889997653
No 282
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=97.31 E-value=0.11 Score=48.40 Aligned_cols=240 Identities=7% Similarity=0.033 Sum_probs=126.0
Q ss_pred CeEEEEEcC-CCCEEEEEcCC--ceEEEeCCCCcEEEEEeeC-----CEEEEEE-------ccCCCEEEEEeCCCCCCCC
Q 019672 9 PVFFVSFNQ-DNSGFALSTKD--GFKIFDSSTGRLCYERAVG-----AFSIVEM-------LYSSSLLAIVGAGEQPSLS 73 (337)
Q Consensus 9 ~v~~~~fs~-dg~~la~g~~~--g~~vw~~~~~~~~~~~~~~-----~~~~~~~-------~~~~~~~~~~~~g~~~~~~ 73 (337)
.-..++|+| ++..|.++... .+++.|++.+++..-.... ....+.+ ..+.+.+.+..........
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~ 219 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDE 219 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCccc
Confidence 467899998 45555555443 4678888877664433222 2455566 5566655554432000000
Q ss_pred CceEEEEECCC-CCEE-----EEE-EcCCceeEEEEcC--CeEEEEE--CCeEEEEECC-------CCee----------
Q 019672 74 PRRLCLFNTTT-GTAL-----REL-NFLTSILAVRLNK--KRLVIVL--REKTYIYDAN-------TLAI---------- 125 (337)
Q Consensus 74 d~~v~iwd~~~-~~~~-----~~~-~~~~~v~~i~~~~--~~~~v~~--d~~i~i~d~~-------~~~~---------- 125 (337)
...|.+.+... ++.. ..+ .+. ....+++++ ..++++. .+.|..+|+. ++..
T Consensus 220 ~~~V~~i~r~~~G~~~~~~~~~~v~~~~-~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g 298 (496)
T 3kya_A 220 SPSVYIIKRNADGTFDDRSDIQLIAAYK-QCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPN 298 (496)
T ss_dssp EEEEEEEECCTTSCCSTTSCEEEEEEES-CCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTT
T ss_pred CceEEEEecCCCCceeecccceeeccCC-CceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeeccccccccc
Confidence 12366665443 1211 111 222 234567776 4556655 6789999987 4443
Q ss_pred -eeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEcc--CCcc-----c--c---------------cCceE-E
Q 019672 126 -LDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVM--ELHS-----H--C---------------EAPLA-A 179 (337)
Q Consensus 126 -~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~--~~~~-----~--~---------------~~~i~-~ 179 (337)
...+...+.......++++|++..|..+.. ..+.|+.+|.. .... . . -.... .
T Consensus 299 ~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~-~~h~I~kid~dg~~~~~~~~~~~aG~~g~~G~~DG~~~~a~f~~P~~g 377 (496)
T 3kya_A 299 TFKQLFTIADPSWEFQIFIHPTGKYAYFGVI-NNHYFMRSDYDEIKKEFITPYNFVGGYKQSGYRDDVGTEARMNNPCQG 377 (496)
T ss_dssp TEEEEEECSSSSCCEEEEECTTSSEEEEEET-TTTEEEEEEEETTTTEECCCEEEEEBTTBCCCBCCBGGGCBCSSEEEE
T ss_pred ccceeEecCCCCCceEEEEcCCCCEEEEEeC-CCCEEEEEecCCCcceecccEEecCCCCCCcccCCcccccccCCCeEE
Confidence 112111111122345566777775444443 46888886543 2110 0 0 01233 5
Q ss_pred EEeC-------CCCCEEEEEeCCCcEEEEEEcCCCceeEeec-c------------CCcc---------eeEEEEEeecC
Q 019672 180 IVLS-------SNGMYIATASEQGTIIRVFLVSEATKSYSFR-R------------GTYP---------STIFSLSFGQS 230 (337)
Q Consensus 180 ~~~s-------~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~-~------------~~~~---------~~i~~l~fs~d 230 (337)
++.. ++|.+.++=+... .||.++ .+|. +.++- . +... .....|+++++
T Consensus 378 v~vd~~~~~~~~~g~lyVaD~~N~-rIr~i~-~~G~-v~TiaG~g~~~~~~~~~~~G~~dG~~~~~a~f~~P~gIavd~~ 454 (496)
T 3kya_A 378 VFVKNPDYTGEEEYDFYFVDRLNF-CVRKVT-PEGI-VSTYAGRGASTSLADGNQWGTDDGDLREVARFRDVSGLVYDDV 454 (496)
T ss_dssp EEEECTTCCSSCCEEEEEEEGGGT-EEEEEC-TTCB-EEEEEESCTTHHHHHSCSCCCCCEETTTTCCCSSEEEEEEETT
T ss_pred EEEccccccccCCCeEEEEECCCC-EEEEEe-CCCC-EEEEecccccccccCccccccCCCCchhhhhcCCCcEEEEECC
Confidence 5554 5666555544444 478888 5664 33331 1 1001 12678999997
Q ss_pred -CCcccEEEEEeCCCcEEEEecCCCcc
Q 019672 231 -MQFQDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 231 -g~~~~~las~s~dg~v~iw~l~~~~~ 256 (337)
|. ++++=+....|+.++++....
T Consensus 455 ~g~---lyVaD~~N~rIrki~~~~~~~ 478 (496)
T 3kya_A 455 KEM---FYVHDQVGHTIRTISMEQEEN 478 (496)
T ss_dssp TTE---EEEEETTTTEEEEEEECCCC-
T ss_pred CCE---EEEEeCCCCEEEEEECCCCcc
Confidence 76 677777778899999876543
No 283
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.30 E-value=0.083 Score=46.84 Aligned_cols=171 Identities=11% Similarity=-0.042 Sum_probs=99.4
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcC--CeEEEEE--CCeEEEEECCCCeeeeeecCC-CCCceEEEEeeCCCcc
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTV-PNLKGLCAFSPSLNAC 148 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 148 (337)
.+.|+..++..............+.++++++ +.++++. .+.|+.+++........+... ..+.+ +++ ++.+.
T Consensus 52 ~~~I~~i~~~g~~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~g-lav--d~~~g 128 (349)
T 3v64_C 52 RIDIRQVLPHRSEYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGG-LAV--DWVHD 128 (349)
T ss_dssp BSCEEEECTTSCCEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE-EEE--ETTTT
T ss_pred ccceEEEeCCCCeeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccE-EEE--ecCCC
Confidence 3568888887665544444445678888874 4566665 578999998765433323221 22323 344 43333
Q ss_pred EEEEcCCCCccEEEEEEccCCccc--c-c--CceEEEEeCCCCCEEEEEe-CC-CcEEEEEEcCCCceeEeeccCCccee
Q 019672 149 FLAVPASTTKGSVLVYNVMELHSH--C-E--APLAAIVLSSNGMYIATAS-EQ-GTIIRVFLVSEATKSYSFRRGTYPST 221 (337)
Q Consensus 149 ~la~~~~~~dg~v~i~d~~~~~~~--~-~--~~i~~~~~s~dg~~lat~s-~d-g~~i~vwd~~~~~~~~~~~~~~~~~~ 221 (337)
.|..+.. ..+.|.+.++...... . . ...+.++++|.+..|..+. .. +. |...++... ....+... .-..
T Consensus 129 ~ly~~d~-~~~~I~~~~~dG~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~-I~r~~~dG~-~~~~~~~~-~~~~ 204 (349)
T 3v64_C 129 KLYWTDS-GTSRIEVANLDGAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPR-IEASSMDGS-GRRIIADT-HLFW 204 (349)
T ss_dssp EEEEEET-TTTEEEEEETTSCSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSC-SCEESCCS-SCSC
T ss_pred eEEEEcC-CCCeEEEEcCCCCceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCE-EEEEeCCCC-CcEEEEEC-CCCC
Confidence 3333332 3678999998654321 1 1 5578999999655544443 43 44 577777543 22222111 1223
Q ss_pred EEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 222 IFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 222 i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
...|+|+|++. .++.+-+..+.|..++++.
T Consensus 205 PnGla~d~~~~--~lY~aD~~~~~I~~~~~dG 234 (349)
T 3v64_C 205 PNGLTIDYAGR--RMYWVDAKHHVIERANLDG 234 (349)
T ss_dssp EEEEEEETTTT--EEEEEETTTTEEEEEETTS
T ss_pred cceEEEeCCCC--EEEEEECCCCEEEEEeCCC
Confidence 67899998666 2555556677899999864
No 284
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.21 E-value=0.026 Score=51.81 Aligned_cols=149 Identities=9% Similarity=0.018 Sum_probs=87.5
Q ss_pred eeEEEEcC---CeEEEEEC-CeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC---CccEEEEEEccCC
Q 019672 97 ILAVRLNK---KRLVIVLR-EKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST---TKGSVLVYNVMEL 169 (337)
Q Consensus 97 v~~i~~~~---~~~~v~~d-~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~---~dg~v~i~d~~~~ 169 (337)
...+++++ +.++++.. +.|+.+|+..++...... .....+.+++++++..|.++... ....+.+++....
T Consensus 139 P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~---~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~ 215 (430)
T 3tc9_A 139 AVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYS---GLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESG 215 (430)
T ss_dssp CCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEEC---CCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGT
T ss_pred CCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEec---CCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCc
Confidence 45677875 34445443 689999998765443333 22345666777777755544421 0113444443321
Q ss_pred cc----c-ccCceEEEEeCC-CCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEE-EeC
Q 019672 170 HS----H-CEAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVA-TSS 242 (337)
Q Consensus 170 ~~----~-~~~~i~~~~~s~-dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las-~s~ 242 (337)
.. + .......++++| +|.++++-...+. |..++..++........+. ...-..|+|+|+|+ +|.. -..
T Consensus 216 ~~~~~~l~~~~~p~giavdp~~g~lyv~d~~~~~-V~~~~~~~~~~~~~~~~~~-~~~P~gia~~pdG~---~lyv~d~~ 290 (430)
T 3tc9_A 216 FKVITELTKGQNCNGAETHPINGELYFNSWNAGQ-VFRYDFTTQETTPLFTIQD-SGWEFHIQFHPSGN---YAYIVVVN 290 (430)
T ss_dssp SCSEEEEEECSSCCCEEECTTTCCEEEEETTTTE-EEEEETTTTEEEEEEECSS-SSCCEEEEECTTSS---EEEEEETT
T ss_pred eeeeeeeccCCCceEEEEeCCCCEEEEEECCCCE-EEEEECCCCcEEEEEEcCC-CCcceeEEEcCCCC---EEEEEECC
Confidence 11 1 114567889999 7776666656666 6889988765422222211 12246799999998 5544 456
Q ss_pred CCcEEEEecCC
Q 019672 243 SGSLHVFSPGF 253 (337)
Q Consensus 243 dg~v~iw~l~~ 253 (337)
.+.|..++.+.
T Consensus 291 ~~~I~~~~~d~ 301 (430)
T 3tc9_A 291 QHYILRSDYDW 301 (430)
T ss_dssp TTEEEEEEEET
T ss_pred CCEEEEEeCCc
Confidence 67899988753
No 285
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=97.20 E-value=0.015 Score=56.37 Aligned_cols=225 Identities=8% Similarity=-0.012 Sum_probs=110.8
Q ss_pred EEEEcCCCCEEEEEcCC--ceEEEeCCCCcEEEEEee--CCEEE-EEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC
Q 019672 12 FVSFNQDNSGFALSTKD--GFKIFDSSTGRLCYERAV--GAFSI-VEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT 86 (337)
Q Consensus 12 ~~~fs~dg~~la~g~~~--g~~vw~~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~ 86 (337)
++++..+|+.+++|+.+ .+.+||..+.+-...... ..... +....+..++ +++|.......-+.+.+||..+++
T Consensus 247 ~~~~~~~g~lyv~GG~~~~~v~~yd~~t~~W~~~~~~~~~R~~~s~~~~~dg~iy-v~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 247 GISMDGNGQIVVTGGNDAKKTSLYDSSSDSWIPGPDMQVARGYQSSATMSDGRVF-TIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEEECTTSCEEEECSSSTTCEEEEEGGGTEEEECCCCSSCCSSCEEEECTTSCEE-EECCCCCSSSCCCCEEEEETTTTE
T ss_pred cccCCCCCCEEEeCCCCCCceEEecCcCCceeECCCCCccccccceEEecCCeEE-EEeCcccCCcccccceEeCCCCCc
Confidence 46778999999998854 379999876642211111 11111 2222244444 344411111123679999998876
Q ss_pred EEEEE-----EcCCc-eeEEEEcCCeEEEEE-----------CCeEEEEECCCCeeeeeecCCC-------CCceEEEEe
Q 019672 87 ALREL-----NFLTS-ILAVRLNKKRLVIVL-----------REKTYIYDANTLAILDTIDTVP-------NLKGLCAFS 142 (337)
Q Consensus 87 ~~~~~-----~~~~~-v~~i~~~~~~~~v~~-----------d~~i~i~d~~~~~~~~~~~~~~-------~~~~~~~~~ 142 (337)
....- ..... -.++....+.+++.. ...+..||..+..-........ .+....++.
T Consensus 326 W~~~~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~~~~~~av~ 405 (656)
T 1k3i_A 326 WTSLPNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPDAMCGNAVM 405 (656)
T ss_dssp EEEETTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCCCBTCEEEE
T ss_pred ceeCCCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCCCCCCceEe
Confidence 44320 00000 000000112222211 3468889987664332221110 011112222
Q ss_pred -eCCCccEEEEcCCCC------cc---EEEEEEccCCccc-------ccCc-eEEEEeCCCCCEEEEEeCC---------
Q 019672 143 -PSLNACFLAVPASTT------KG---SVLVYNVMELHSH-------CEAP-LAAIVLSSNGMYIATASEQ--------- 195 (337)
Q Consensus 143 -~~~~~~~la~~~~~~------dg---~v~i~d~~~~~~~-------~~~~-i~~~~~s~dg~~lat~s~d--------- 195 (337)
+..++.+++++|... .. .|.+||..+..-. .... -.++++.|+|+.++.|+.+
T Consensus 406 ~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~R~~~~~~~l~~g~i~v~GG~~~~~~~~~~~ 485 (656)
T 1k3i_A 406 YDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFARTFHTSVVLPDGSTFITGGQRRGIPFEDST 485 (656)
T ss_dssp EETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSCCBSCEEEECTTSCEEEECCBSBCCTTCCCS
T ss_pred ccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCCcccCCeEECCCCCEEEECCcccCcCcCCCC
Confidence 123566777777310 01 6788887654311 1121 2345667899999999854
Q ss_pred --CcEEEEEEcCCCceeEeeccC-CcceeEEEEEeecCCCcccEEEEEeC
Q 019672 196 --GTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSS 242 (337)
Q Consensus 196 --g~~i~vwd~~~~~~~~~~~~~-~~~~~i~~l~fs~dg~~~~~las~s~ 242 (337)
.. +.+||..+.+-.. +... ..+..-.+..+.|||+ +|+.|+.
T Consensus 486 ~~~~-v~~ydp~t~~W~~-~~~~~~~R~~hs~a~ll~dg~---v~v~GG~ 530 (656)
T 1k3i_A 486 PVFT-PEIYVPEQDTFYK-QNPNSIVRVYHSISLLLPDGR---VFNGGGG 530 (656)
T ss_dssp BCCC-CEEEEGGGTEEEE-CCCCSSCCCTTEEEEECTTSC---EEEEECC
T ss_pred cccc-eEEEcCCCCceee-cCCCCCccccccHhhcCCCcE---EEecCCC
Confidence 23 5799987765321 1100 0011112344569999 8999985
No 286
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=97.19 E-value=0.1 Score=45.76 Aligned_cols=221 Identities=12% Similarity=0.163 Sum_probs=109.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCc---EEEE-EeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEE
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGR---LCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFN 81 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~---~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd 81 (337)
....++++.|.+++..+++|....+ +...+.++ .+.. .......+..+.++.+.+.+++. ++.|.. .
T Consensus 34 ~~~~~~~v~~~~~~~~~~~G~~g~i-~~s~DgG~tW~~~~~~~~~~~~~~~~i~~~~~~~~~~g~-------~g~i~~-S 104 (327)
T 2xbg_A 34 TTATILDMSFIDRHHGWLVGVNATL-METRDGGQTWEPRTLVLDHSDYRFNSVSFQGNEGWIVGE-------PPIMLH-T 104 (327)
T ss_dssp CSSCEEEEEESSSSCEEEEETTTEE-EEESSTTSSCEECCCCCSCCCCEEEEEEEETTEEEEEEE-------TTEEEE-E
T ss_pred CCCcEEEEEECCCCcEEEEcCCCeE-EEeCCCCCCCeECCCCCCCCCccEEEEEecCCeEEEEEC-------CCeEEE-E
Confidence 3457999999988888887764433 33344443 2211 00112222233333444444432 343333 2
Q ss_pred CCCCCEEEEEE----cCCceeEEEE-cCCeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCC
Q 019672 82 TTTGTALRELN----FLTSILAVRL-NKKRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAS 155 (337)
Q Consensus 82 ~~~~~~~~~~~----~~~~v~~i~~-~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~ 155 (337)
...|+.=.... .+..+..|.+ .++.++++. ++.|+. ....++.-..+.. +....+.++...+++.+++++.
T Consensus 105 ~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~g~v~~-S~DgG~tW~~~~~-~~~~~~~~~~~~~~~~~~~~g~- 181 (327)
T 2xbg_A 105 TDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMITNVGAIYR-TKDSGKNWQALVQ-EAIGVMRNLNRSPSGEYVAVSS- 181 (327)
T ss_dssp SSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEETTCCEEE-ESSTTSSEEEEEC-SCCCCEEEEEECTTSCEEEEET-
T ss_pred CCCCCCceECccccCCCCCeEEEEEECCCCEEEEeCCccEEE-EcCCCCCCEEeec-CCCcceEEEEEcCCCcEEEEEC-
Confidence 22232111111 1234566665 345555555 444322 1122322222222 1223466677777777777654
Q ss_pred CCccEEE-EEEc--cCCccc---ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC--CcceeEEEEEe
Q 019672 156 TTKGSVL-VYNV--MELHSH---CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG--TYPSTIFSLSF 227 (337)
Q Consensus 156 ~~dg~v~-i~d~--~~~~~~---~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~--~~~~~i~~l~f 227 (337)
.|.+. -.|- .+-+.. ....+..++++|+++.++ ++.+|. +++.+...|+.-..+... .....+.+++|
T Consensus 182 --~G~~~~S~d~gG~tW~~~~~~~~~~~~~~~~~~~g~~~~-~~~~G~-~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~ 257 (327)
T 2xbg_A 182 --RGSFYSTWEPGQTAWEPHNRTTSRRLHNMGFTPDGRLWM-IVNGGK-IAFSDPDNSENWGELLSPLRRNSVGFLDLAY 257 (327)
T ss_dssp --TSSEEEEECTTCSSCEEEECCSSSCEEEEEECTTSCEEE-EETTTE-EEEEETTEEEEECCCBCTTSSCCSCEEEEEE
T ss_pred --CCcEEEEeCCCCCceeECCCCCCCccceeEECCCCCEEE-EeCCce-EEEecCCCCCeeEeccCCcccCCcceEEEEe
Confidence 34443 3442 222222 125788999999998665 456775 455543334443333222 11124889999
Q ss_pred ecCCCcccEEEEEeCCCcE
Q 019672 228 GQSMQFQDILVATSSSGSL 246 (337)
Q Consensus 228 s~dg~~~~~las~s~dg~v 246 (337)
.+++. +++++. +|.|
T Consensus 258 ~~~~~---~~~~g~-~g~i 272 (327)
T 2xbg_A 258 RTPNE---VWLAGG-AGAL 272 (327)
T ss_dssp SSSSC---EEEEES-TTCE
T ss_pred cCCCE---EEEEeC-CCeE
Confidence 99887 666554 6766
No 287
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.18 E-value=0.084 Score=44.62 Aligned_cols=153 Identities=14% Similarity=0.090 Sum_probs=94.3
Q ss_pred CceeEEEEcC--CeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCc
Q 019672 95 TSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH 170 (337)
Q Consensus 95 ~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~ 170 (337)
..+.++++++ +.++++. ++.|...|.. ++.++.+.... ....-.++..+++.++++.- .++.+.++++....
T Consensus 27 ~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-~~D~EGIa~~~~g~~~vs~E--~~~~l~~~~v~~~~ 102 (255)
T 3qqz_A 27 NNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-VKDLETIEYIGDNQFVISDE--RDYAIYVISLTPNS 102 (255)
T ss_dssp SCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-CSSEEEEEECSTTEEEEEET--TTTEEEEEEECTTC
T ss_pred cCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-CCChHHeEEeCCCEEEEEEC--CCCcEEEEEcCCCC
Confidence 4688899985 4577766 4588888987 77777774321 12233445556666655543 35778888765432
Q ss_pred c---c-----------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcC---CCceeEee-----ccCCcceeEEEEEee
Q 019672 171 S---H-----------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVS---EATKSYSF-----RRGTYPSTIFSLSFG 228 (337)
Q Consensus 171 ~---~-----------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~---~~~~~~~~-----~~~~~~~~i~~l~fs 228 (337)
. . .......|+++|+++.|.++.+... ..||.+. ....+..+ ........+.+|+|+
T Consensus 103 ~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p-~~i~~~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~d 181 (255)
T 3qqz_A 103 EVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNP-IEVYKVNGLLSSNELHISKDKALQRQFTLDDVSGAEFN 181 (255)
T ss_dssp CEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSS-EEEEEEESTTCSSCCEEEECHHHHHTCCSSCCCEEEEE
T ss_pred eeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCC-ceEEEEcccccCCceeeecchhhccccccCCceeEEEc
Confidence 1 0 1134689999999988888887765 3555553 11111111 111112236789999
Q ss_pred cCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 229 QSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 229 ~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
|... .+++.......+.++|.+..
T Consensus 182 p~tg--~lliLS~~s~~L~~~d~~g~ 205 (255)
T 3qqz_A 182 QQKN--TLLVLSHESRALQEVTLVGE 205 (255)
T ss_dssp TTTT--EEEEEETTTTEEEEECTTCC
T ss_pred CCCC--eEEEEECCCCeEEEEcCCCC
Confidence 8776 36777777778899987643
No 288
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=97.16 E-value=0.055 Score=56.22 Aligned_cols=215 Identities=12% Similarity=0.171 Sum_probs=126.4
Q ss_pred eEEEeCCCCcEEEEEeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCCceeEEEE-cCCeEE
Q 019672 30 FKIFDSSTGRLCYERAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLTSILAVRL-NKKRLV 108 (337)
Q Consensus 30 ~~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~-~~~~~~ 108 (337)
+.|-|+.+.......... -...-|.+..+.+++-++ +++.|+|+++.+.++...++++|.--+| +++.+.
T Consensus 50 vvIidl~~~~~~~rrpi~-AdsAIMnP~~~iiALrag--------~~lQiFnl~~k~klks~~~~e~VvfWkWis~~~l~ 120 (1630)
T 1xi4_A 50 VVIIDMNDPSNPIRRPIS-ADSAIMNPASKVIALKAG--------KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVA 120 (1630)
T ss_pred EEEEECCCCCCccccccc-chhhccCCCcceEEEecC--------CeEEEeehHHhhhhcccccCCCceEEEecCCCeeE
Confidence 566777665433221111 111224455667776654 7999999999999999999999887777 788899
Q ss_pred EEECCeEEEEECCCC-eeeeeecCCC--CCceEEEEeeCCCccEEEEcCC-----CCccEEEEEEccCCccc----ccCc
Q 019672 109 IVLREKTYIYDANTL-AILDTIDTVP--NLKGLCAFSPSLNACFLAVPAS-----TTKGSVLVYNVMELHSH----CEAP 176 (337)
Q Consensus 109 v~~d~~i~i~d~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~la~~~~-----~~dg~v~i~d~~~~~~~----~~~~ 176 (337)
++++..|+-|++... .+.+.+..+. ....++.+..+++..+++..|- ...|.+++|........ |-+.
T Consensus 121 lVT~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~iegha~~ 200 (1630)
T 1xi4_A 121 LVTDNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAS 200 (1630)
T ss_pred EEcCCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccceeeeeecccccchhhhHhHhh
Confidence 999999999999642 3444443332 2345777888888888886651 13588999987654321 1111
Q ss_pred eEEEEe--CC-CCCEEEEEeC--CCcEEEEEEcCCC-ceeEeec-------cCC--cceeEEEEEeecCCCcccEEEEEe
Q 019672 177 LAAIVL--SS-NGMYIATASE--QGTIIRVFLVSEA-TKSYSFR-------RGT--YPSTIFSLSFGQSMQFQDILVATS 241 (337)
Q Consensus 177 i~~~~~--s~-dg~~lat~s~--dg~~i~vwd~~~~-~~~~~~~-------~~~--~~~~i~~l~fs~dg~~~~~las~s 241 (337)
-..+.+ ++ ..+.++-+.. .|.-++|-++... ..-..|. ... ...--.++..|+.-. .+..-+
T Consensus 201 F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g---~iy~it 277 (1630)
T 1xi4_A 201 FAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHD---VVFLIT 277 (1630)
T ss_pred hheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccccCcceEEEeccccC---EEEEEe
Confidence 111111 01 1112222211 1223577777432 1001111 000 001123567777666 788888
Q ss_pred CCCcEEEEecCCCcc
Q 019672 242 SSGSLHVFSPGFAIN 256 (337)
Q Consensus 242 ~dg~v~iw~l~~~~~ 256 (337)
.-|.||+||+.++..
T Consensus 278 k~G~~~~~d~~t~~~ 292 (1630)
T 1xi4_A 278 KYGYIHLYDLETGTC 292 (1630)
T ss_pred cCceEEEEecccchh
Confidence 999999999998765
No 289
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.13 E-value=0.044 Score=48.05 Aligned_cols=152 Identities=12% Similarity=0.107 Sum_probs=96.3
Q ss_pred eEEEEcC--CeEEEEE--CCeEEEEECCCCeeee-eecC----CCCCceEEEEee---CCCccEEEEcCC----------
Q 019672 98 LAVRLNK--KRLVIVL--REKTYIYDANTLAILD-TIDT----VPNLKGLCAFSP---SLNACFLAVPAS---------- 155 (337)
Q Consensus 98 ~~i~~~~--~~~~v~~--d~~i~i~d~~~~~~~~-~~~~----~~~~~~~~~~~~---~~~~~~la~~~~---------- 155 (337)
-++.|++ ..++++. .++|..||...+.... .+.. .........+.. ++++.++++...
T Consensus 16 E~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~ 95 (334)
T 2p9w_A 16 EDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQS 95 (334)
T ss_dssp SCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCC
T ss_pred cCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccc
Confidence 3566765 6677766 7899999987553322 2221 111123467777 677777664220
Q ss_pred -CCccEEEEEEcc---CCccccc------------------CceEEEEeCCCCCEEEEEeCC-CcEEEEEEcCCCceeEe
Q 019672 156 -TTKGSVLVYNVM---ELHSHCE------------------APLAAIVLSSNGMYIATASEQ-GTIIRVFLVSEATKSYS 212 (337)
Q Consensus 156 -~~dg~v~i~d~~---~~~~~~~------------------~~i~~~~~s~dg~~lat~s~d-g~~i~vwd~~~~~~~~~ 212 (337)
..+..|..||+. +++.... ...+.++.+++|+.-++++.- +.++ ..+.. |+.+..
T Consensus 96 ~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~-rV~pd-G~~~~~ 173 (334)
T 2p9w_A 96 SHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIA-RVSAD-GKTVST 173 (334)
T ss_dssp SSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEE-EECTT-SCCEEE
T ss_pred cCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCCeEE-EEeCC-CCEEee
Confidence 015779999998 6654321 248899999999999998887 6533 34443 333332
Q ss_pred ecc----CCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 213 FRR----GTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 213 ~~~----~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
+.. .....-.+.|+++|||. .|++....|.+.-||+.+.
T Consensus 174 ~~~~~~~~~~~~G~nGIv~~pdg~---~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 174 FAWESGNGGQRPGYSGITFDPHSN---KLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp EEECCCCSSSCCSCSEEEEETTTT---EEEEESSSSSEEEEECSSS
T ss_pred eeecCCCcccccCcceEEEeCCCC---EEEEEcCCCeEEEEcCCCC
Confidence 211 11111256889999999 7877777999999998843
No 290
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=96.91 E-value=0.23 Score=44.94 Aligned_cols=172 Identities=9% Similarity=-0.008 Sum_probs=99.9
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcC--CeEEEEE--CCeEEEEECCCC----eeeeeecCCCCCceEEEEeeCC
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTL----AILDTIDTVPNLKGLCAFSPSL 145 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~----~~~~~~~~~~~~~~~~~~~~~~ 145 (337)
.+.|+..|+........+.....+.++++++ +.++++. .+.|+.+++... .....+... ......++.++
T Consensus 91 ~~~I~~i~l~~~~~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~--~~~p~glavD~ 168 (400)
T 3p5b_L 91 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD--IQAPDGLAVDW 168 (400)
T ss_dssp TTEEEEECTTSCSCEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS--CSCEEEEEEET
T ss_pred cceeEEEccCCcceeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC--CCCcccEEEEe
Confidence 4688888888766555555556788888874 5666665 578988888652 122222211 11233444444
Q ss_pred CccEEEEcCCCCccEEEEEEccCCccc---c--cCceEEEEeCCCCCEEEEEe-C-CCcEEEEEEcCCCceeEeeccCCc
Q 019672 146 NACFLAVPASTTKGSVLVYNVMELHSH---C--EAPLAAIVLSSNGMYIATAS-E-QGTIIRVFLVSEATKSYSFRRGTY 218 (337)
Q Consensus 146 ~~~~la~~~~~~dg~v~i~d~~~~~~~---~--~~~i~~~~~s~dg~~lat~s-~-dg~~i~vwd~~~~~~~~~~~~~~~ 218 (337)
.+..|..+.. ..+.|.+.|+...... . ......|+++|.+.+|.-+. . .+. |...++..... ..+... .
T Consensus 169 ~~~~lY~~d~-~~~~I~~~~~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~-I~~~~~dG~~~-~~~~~~-~ 244 (400)
T 3p5b_L 169 IHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLNGVDI-YSLVTE-N 244 (400)
T ss_dssp TTTEEEEEET-TTTEEEEECTTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCC-EEEEETTSCSC-EEEECS-S
T ss_pred cCCceEEEEC-CCCeEEEEeCCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCE-EEEEeCCCCcc-EEEEEC-C
Confidence 3333443333 4688999998754321 1 14578999999665555443 2 245 57788754332 222111 1
Q ss_pred ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 219 PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 219 ~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
-.....|+++|++. .++.+-+..+.|..+|++.
T Consensus 245 l~~P~glavd~~~~--~lY~aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 245 IQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNG 277 (400)
T ss_dssp CSCEEEEEEETTTT--EEEEEETTTTEEEEEETTS
T ss_pred CCceEEEEEEeCCC--EEEEEECCCCEEEEEeCCC
Confidence 12367899998776 1445545667899999864
No 291
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.86 E-value=0.42 Score=47.28 Aligned_cols=223 Identities=7% Similarity=-0.042 Sum_probs=121.4
Q ss_pred EEEEEcCCceEEEeCCCCcEEEEE-eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC----EEEEEE-cC
Q 019672 21 GFALSTKDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT----ALRELN-FL 94 (337)
Q Consensus 21 ~la~g~~~g~~vw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~----~~~~~~-~~ 94 (337)
+|+......++..+++..+..... ......-+++.+..+.+.++.. ..++|+.+++.... ....+. .-
T Consensus 397 ~Ll~an~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~------~~~~I~~~~l~g~~~~~~~~~vi~~~l 470 (791)
T 3m0c_C 397 YLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDI 470 (791)
T ss_dssp EEEEECBSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEET------TTTEEEEEEC--------CEEEECSSC
T ss_pred ccccccccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeec------cceeEEEEeccCCCCCcceeEEEecCC
Confidence 455555566777777655432222 2233444555555566655554 36788888886531 122222 11
Q ss_pred CceeEEEEc--CCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCc
Q 019672 95 TSILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH 170 (337)
Q Consensus 95 ~~v~~i~~~--~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~ 170 (337)
....+|+++ .+.++++. .+.|.+.++........+.... ....+++.+|.+..|..+.....+.|...++....
T Consensus 471 ~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l--~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~ 548 (791)
T 3m0c_C 471 QAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVD 548 (791)
T ss_dssp SCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECTT--CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCC
T ss_pred CCcceeeeeecCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCC--CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCc
Confidence 244566665 45677766 5689999987543322222111 12334555555445554432123778888886443
Q ss_pred cc---cc--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-CcceeEEEEEeecCCCcccEEEEEeCCC
Q 019672 171 SH---CE--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSSG 244 (337)
Q Consensus 171 ~~---~~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-~~~~~i~~l~fs~dg~~~~~las~s~dg 244 (337)
.. .. ...+.|++++.+.+|..+......|...++..... ..+... ..-....+|++..+ . ++.+-...+
T Consensus 549 ~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~-~~v~~~~~~l~~P~glav~~~-~---lYwtD~~~~ 623 (791)
T 3m0c_C 549 IYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-K---VFWTDIINE 623 (791)
T ss_dssp EEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEECTTTTSSEEEEEEETT-E---EEEEETTTT
T ss_pred eEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCCce-EEEecCCCccCCCCEEEEeCC-E---EEEEECCCC
Confidence 21 11 56889999987777777665544578888854333 333211 11122456776433 4 666666778
Q ss_pred cEEEEecCCCcc
Q 019672 245 SLHVFSPGFAIN 256 (337)
Q Consensus 245 ~v~iw~l~~~~~ 256 (337)
.|...+..++..
T Consensus 624 ~I~~~dk~tG~~ 635 (791)
T 3m0c_C 624 AIFSANRLTGSD 635 (791)
T ss_dssp EEEEEETTTCCC
T ss_pred EEEEEeCCCCcc
Confidence 888888655543
No 292
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.85 E-value=0.37 Score=47.32 Aligned_cols=226 Identities=11% Similarity=0.092 Sum_probs=127.1
Q ss_pred CCCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEE-eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC
Q 019672 6 SSYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (337)
Q Consensus 6 ~~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~ 84 (337)
+...|+++.-+++|.. -.|+.+|+..||-...+..... ......+.++..+.+..+.++. ++-+..+|..+
T Consensus 20 ~~n~V~~I~qD~~G~l-WigT~~GL~ryDG~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigT-------~~Gl~~yd~~~ 91 (758)
T 3ott_A 20 EASVVSCFLQDSEGLI-WIGSNKGLFSYDGYSTQQHFTYGENNNTRIYCGVIIDNTYLYMGT-------DNGILVYNYRA 91 (758)
T ss_dssp SCCCEEEEEECTTSCE-EEEESSCEEEECSSCEEECSCTTSTTSSCEEEEEEETTTEEEEEE-------TTEEEEEETTT
T ss_pred ccceEEEEEECCCCCE-EEEECCCccccCCCceEEEEccCCCCCceEEEEEEcCCCcEEEEe-------CCCeEEEeCCC
Confidence 3567999998988864 4567889988874332211100 0111122233333333334443 34588899877
Q ss_pred CCEEEEE-EcCCceeEEEEcCCeEEEEECCeEEEEECCCCeeeeeec---CCCCCceEEEEeeCCCccEEEEcCCCCccE
Q 019672 85 GTALREL-NFLTSILAVRLNKKRLVIVLREKTYIYDANTLAILDTID---TVPNLKGLCAFSPSLNACFLAVPASTTKGS 160 (337)
Q Consensus 85 ~~~~~~~-~~~~~v~~i~~~~~~~~v~~d~~i~i~d~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~la~~~~~~dg~ 160 (337)
.+..... .....|.++....+.+.+++.+.+..||..+.+.. .+. .......+.++..+.++.+.+... .|
T Consensus 92 ~~f~~~~~~~~~~i~~i~~~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~---~G- 166 (758)
T 3ott_A 92 DRYEQPETDFPTDVRTMALQGDTLWLGALNGLYTYQLQSRKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGTY---NG- 166 (758)
T ss_dssp TEECCCSCCCCSCEEEEEEETTEEEEEETTEEEEEETTTCCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEET---TE-
T ss_pred CEEECcccCCCceEEEEEecCCcEEEEcCCcceeEeCCCCeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEeC---CC-
Confidence 6432100 01234776766677888888778999998765432 221 011123466777766665554332 34
Q ss_pred EEEEEccCCcccc----------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecC
Q 019672 161 VLVYNVMELHSHC----------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS 230 (337)
Q Consensus 161 v~i~d~~~~~~~~----------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~d 230 (337)
+..+|..+.+... ...|.++..++++..|-.|+..| +..+|..+++.. .+.. .....|.++...++
T Consensus 167 l~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~~~~lWigt~~G--l~~~~~~~~~~~-~~~~-l~~~~i~~i~~d~~ 242 (758)
T 3ott_A 167 LCRYIPSNGKFEGIPLPVHSSQSNLFVNSLLEDTTRQCVWIGTEGY--LFQYFPSTGQIK-QTEA-FHNNSIKSLALDGN 242 (758)
T ss_dssp EEEEETTTTEEEEECCCCCTTCSSCCEEEEEEETTTTEEEEEEEEE--EEEEETTTTEEE-EEEE-EEEEEEEEEEECTT
T ss_pred HhhCccCCCceEEecCCCccccccceeEEEEEECCCCEEEEEECCC--CeEEcCCCCeEE-eccC-CCCCeEEEEEEcCC
Confidence 7778876543211 13488998888776444455444 357898776532 2211 11335888988888
Q ss_pred CCcccEEEEEeCCCcEEEEecCC
Q 019672 231 MQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 231 g~~~~~las~s~dg~v~iw~l~~ 253 (337)
|. |-.|+.+| +.+++..+
T Consensus 243 g~----lWigT~~G-l~~~~~~~ 260 (758)
T 3ott_A 243 GD----LLAGTDNG-LYVYHNDT 260 (758)
T ss_dssp CC----EEEEETTE-EEEECCTT
T ss_pred CC----EEEEeCCc-eeEEecCC
Confidence 87 44445544 77777654
No 293
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=96.82 E-value=0.59 Score=48.34 Aligned_cols=231 Identities=11% Similarity=0.091 Sum_probs=122.5
Q ss_pred CCCeEEEEEcCC------CCEEEEEcC-Cc-eEEEeCCCCcEEEEEeeC------CEEEEEEccCCCEEEEEeCCCCCCC
Q 019672 7 SYPVFFVSFNQD------NSGFALSTK-DG-FKIFDSSTGRLCYERAVG------AFSIVEMLYSSSLLAIVGAGEQPSL 72 (337)
Q Consensus 7 ~~~v~~~~fs~d------g~~la~g~~-~g-~~vw~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~g~~~~~ 72 (337)
+.+|.|+++.|. ++++|+|.. ++ ++|+++.+.+.+...... .+.++.+ .+....+++-
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~--~~~~~L~igl------ 624 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFELLHKEMLGGEIIPRSILMTTF--ESSHYLLCAL------ 624 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEE--TTEEEEEEEE------
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEe--CCCcEEEEEe------
Confidence 457999999864 368999985 54 799999887766544332 1222332 3334445554
Q ss_pred CCceEEEE--ECCCCCEEEE--EE-cCCceeEEEEc--CCeE-EEEECCeEEEEECCCCeeeeeecCCCCCceEEEEeeC
Q 019672 73 SPRRLCLF--NTTTGTALRE--LN-FLTSILAVRLN--KKRL-VIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPS 144 (337)
Q Consensus 73 ~d~~v~iw--d~~~~~~~~~--~~-~~~~v~~i~~~--~~~~-~v~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (337)
.||.+.-+ |..+|+.... .. ...++.=..+. .... +++++.-..+|--+ ++....-........++.|+..
T Consensus 625 ~dG~l~~~~~d~~tg~l~d~r~~~LG~~pv~L~~~~~~~~~~V~a~s~rp~liy~~~-~~l~~s~l~~~~v~~~~~F~se 703 (1158)
T 3ei3_A 625 GDGALFYFGLNIETGLLSDRKKVTLGTQPTVLRTFRSLSTTNVFACSDRPTVIYSSN-HKLVFSNVNLKEVNYMCPLNSD 703 (1158)
T ss_dssp TTSEEEEEEECTTTCCEEEEEEEECCSSCCEEEEEESSSCEEEEEESSSCEEEEESS-SSEEEEEBSSSCCCEEEEECCS
T ss_pred CCCeEEEEEEcCCCCccccceeEEcCCCceEEEEEeeCCceeEEEECCCCEEEEEcC-CceEEeccChHHhceEeccCcc
Confidence 37776544 4456655432 22 22344333332 2223 33335555555433 2222111111122344555432
Q ss_pred C-CccEEEEcCCCCccEEEEEEccCCccccc------CceEEEEeCCCCCEEEEEeCC----------------------
Q 019672 145 L-NACFLAVPASTTKGSVLVYNVMELHSHCE------APLAAIVLSSNGMYIATASEQ---------------------- 195 (337)
Q Consensus 145 ~-~~~~la~~~~~~dg~v~i~d~~~~~~~~~------~~i~~~~~s~dg~~lat~s~d---------------------- 195 (337)
. .+.+++.. ++.++|..+......+. ..+..++++|+.+.++.+..+
T Consensus 704 ~~~~g~v~~~----~~~LrI~~i~~~~~~~~~~ipL~~Tprri~y~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 779 (1158)
T 3ei3_A 704 GYPDSLALAN----NSTLTIGTIDEIQKLHIRTVPLYESPRKICYQEVSQCFGVLSSRIEVQDTSGGTTALRPSASTQAL 779 (1158)
T ss_dssp SSTTEEEEEC----SSCEEEEEECCSSSEEEEEEECSSEEEEEEEEGGGTEEEEEEEEEEEECSSSSEEESSCCHHHHCS
T ss_pred cCCCcEEEEc----CCceEEEEecccCCeeEEEEeCCCCceEEEEcCCCCEEEEEEEeccccccccccchhhhhhhhhhh
Confidence 1 22233332 34588887654432221 667888888877755543311
Q ss_pred --------------------------CcEEEEEEcCCCceeEeeccCCcce--eEEEEEeecCCCcccEEEEEe------
Q 019672 196 --------------------------GTIIRVFLVSEATKSYSFRRGTYPS--TIFSLSFGQSMQFQDILVATS------ 241 (337)
Q Consensus 196 --------------------------g~~i~vwd~~~~~~~~~~~~~~~~~--~i~~l~fs~dg~~~~~las~s------ 241 (337)
...|++.|-.+.+.+..+....... .+..+.|..+.+ ++|++|.
T Consensus 780 ~~~~~~~~~~~~~~~~~~~~~g~~~~~s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~--~~lvVGTa~~~~~ 857 (1158)
T 3ei3_A 780 SSSVSSSKLFSSSTAPHETSFGEEVEVHNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPN--TYFIVGTAMVYPE 857 (1158)
T ss_dssp EEEECCCCCC----------CCCEEEEEEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCC--CEEEEEEEECCTT
T ss_pred hhcccccccccccccCchhhcCCceeeEEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCC--EEEEEEeeecCCC
Confidence 1236788888887776664433221 134445654433 3899887
Q ss_pred ----CCCcEEEEecC
Q 019672 242 ----SSGSLHVFSPG 252 (337)
Q Consensus 242 ----~dg~v~iw~l~ 252 (337)
..|.|++|++.
T Consensus 858 e~~~~~Gri~vf~v~ 872 (1158)
T 3ei3_A 858 EAEPKQGRIVVFQYS 872 (1158)
T ss_dssp CSSCCCEEEEEEEEE
T ss_pred CCCCCceEEEEEEEE
Confidence 35789999986
No 294
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=96.52 E-value=0.09 Score=48.18 Aligned_cols=149 Identities=10% Similarity=0.030 Sum_probs=85.2
Q ss_pred eeEEEEcC----CeEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC-C-ccEEEEEEccCC
Q 019672 97 ILAVRLNK----KRLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST-T-KGSVLVYNVMEL 169 (337)
Q Consensus 97 v~~i~~~~----~~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-~-dg~v~i~d~~~~ 169 (337)
...+++++ ..++++. .+.|+.+|+.+++....... ......++.++++.++++.... . ...+...+....
T Consensus 141 P~gvavd~~s~~g~Lyv~D~~~~I~~id~~~g~v~~~~~~---~~~P~giavd~dG~lyVad~~~~~~~~gv~~~~~~~~ 217 (433)
T 4hw6_A 141 IWRMMFDPNSNYDDLYWVGQRDAFRHVDFVNQYVDIKTTN---IGQCADVNFTLNGDMVVVDDQSSDTNTGIYLFTRASG 217 (433)
T ss_dssp CCEEEECTTTTTCEEEEECBTSCEEEEETTTTEEEEECCC---CSCEEEEEECTTCCEEEEECCSCTTSEEEEEECGGGT
T ss_pred CceEEEccccCCCEEEEEeCCCCEEEEECCCCEEEEeecC---CCCccEEEECCCCCEEEEcCCCCcccceEEEEECCCC
Confidence 45788886 3455554 37899999977765543332 2234555666676644443210 0 112333333222
Q ss_pred cc----c-ccCceEEEEeCC-CCCEEEEEeCCCcEEEEEEcCCCceeEee-ccCCcceeEEEEEeecCCCcccEE-EEEe
Q 019672 170 HS----H-CEAPLAAIVLSS-NGMYIATASEQGTIIRVFLVSEATKSYSF-RRGTYPSTIFSLSFGQSMQFQDIL-VATS 241 (337)
Q Consensus 170 ~~----~-~~~~i~~~~~s~-dg~~lat~s~dg~~i~vwd~~~~~~~~~~-~~~~~~~~i~~l~fs~dg~~~~~l-as~s 241 (337)
.. . .......++++| +|.+.++-..++. |+.+|..+++....+ ..+. ...-..|+|+|+|+ +| ++-.
T Consensus 218 ~~~~~~~~~~~~P~giavd~~~G~lyv~d~~~~~-V~~~d~~~g~~~~~~~~~~~-~~~~~~ia~dpdG~---~LYvad~ 292 (433)
T 4hw6_A 218 FTERLSLCNARGAKTCAVHPQNGKIYYTRYHHAM-ISSYDPATGTLTEEEVMMDT-KGSNFHIVWHPTGD---WAYIIYN 292 (433)
T ss_dssp TCCEEEEEECSSBCCCEECTTTCCEEECBTTCSE-EEEECTTTCCEEEEEEECSC-CSSCEEEEECTTSS---EEEEEET
T ss_pred eeccccccccCCCCEEEEeCCCCeEEEEECCCCE-EEEEECCCCeEEEEEeccCC-CCCcccEEEeCCCC---EEEEEeC
Confidence 11 0 114457789999 7776666556665 688998877652222 2221 11234699999998 54 4445
Q ss_pred CCCcEEEEecCC
Q 019672 242 SSGSLHVFSPGF 253 (337)
Q Consensus 242 ~dg~v~iw~l~~ 253 (337)
..+.|+.++++.
T Consensus 293 ~~~~I~~~~~d~ 304 (433)
T 4hw6_A 293 GKHCIYRVDYNR 304 (433)
T ss_dssp TTTEEEEEEBCT
T ss_pred CCCEEEEEeCCC
Confidence 567899988763
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.47 E-value=0.15 Score=47.44 Aligned_cols=151 Identities=10% Similarity=0.051 Sum_probs=87.3
Q ss_pred eeEEEEcC---CeEEEEEC--CeEEEEECCCCeeeeeecCCC-CCceEEEEee-------CCCccEEEEcCCCC-----c
Q 019672 97 ILAVRLNK---KRLVIVLR--EKTYIYDANTLAILDTIDTVP-NLKGLCAFSP-------SLNACFLAVPASTT-----K 158 (337)
Q Consensus 97 v~~i~~~~---~~~~v~~d--~~i~i~d~~~~~~~~~~~~~~-~~~~~~~~~~-------~~~~~~la~~~~~~-----d 158 (337)
...|+++| +.++++.+ +.|++.|+.++.+...+.... .......+++ ++++..|.++.... .
T Consensus 141 p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~~~~ 220 (496)
T 3kya_A 141 NGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTIPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKGDES 220 (496)
T ss_dssp EEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTSSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTGGGE
T ss_pred CCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCccccCCCcEEEEeecccccCCCCCEEEEEeCCCCCcccC
Confidence 45788886 35666663 478889988776554433221 1223556666 67776555554311 1
Q ss_pred cEEEEEEccC-Cccc--------cc-CceEEEEeCC-CCCEEEEEeCCCcEEEEEEcC-------CCce-----------
Q 019672 159 GSVLVYNVME-LHSH--------CE-APLAAIVLSS-NGMYIATASEQGTIIRVFLVS-------EATK----------- 209 (337)
Q Consensus 159 g~v~i~d~~~-~~~~--------~~-~~i~~~~~s~-dg~~lat~s~dg~~i~vwd~~-------~~~~----------- 209 (337)
..|.+++... +... .. .....++++| ++.++++-..++. |..+|+. ++..
T Consensus 221 ~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~-V~r~d~~~~~~~~~tg~~~tp~~~~~~g~ 299 (496)
T 3kya_A 221 PSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQ-VFRLDLVDYFKTIKNGGSWDPIVKNNPNT 299 (496)
T ss_dssp EEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTE-EEEECHHHHHHHHHTTCCCCCBGGGCTTT
T ss_pred ceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCE-EEEEecccccccccCceeecccccccccc
Confidence 2366665333 1111 11 3456889999 5555666666676 5789987 5553
Q ss_pred eEe-eccCCcceeEEEEEeecCCCcccE-EEEEeCCCcEEEEecC
Q 019672 210 SYS-FRRGTYPSTIFSLSFGQSMQFQDI-LVATSSSGSLHVFSPG 252 (337)
Q Consensus 210 ~~~-~~~~~~~~~i~~l~fs~dg~~~~~-las~s~dg~v~iw~l~ 252 (337)
... +..+ ....-+.|+|+|+|+ + +++-+....|+.++..
T Consensus 300 ~~~l~~~~-~~~~p~~ia~~p~G~---~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 300 FKQLFTIA-DPSWEFQIFIHPTGK---YAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp EEEEEECS-SSSCCEEEEECTTSS---EEEEEETTTTEEEEEEEE
T ss_pred cceeEecC-CCCCceEEEEcCCCC---EEEEEeCCCCEEEEEecC
Confidence 112 1111 122347899999998 5 4444566788886654
No 296
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=96.47 E-value=0.17 Score=45.86 Aligned_cols=96 Identities=14% Similarity=0.098 Sum_probs=65.6
Q ss_pred ccEEEEEEccCCc-c--cc------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCce------------eEeeccC
Q 019672 158 KGSVLVYNVMELH-S--HC------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK------------SYSFRRG 216 (337)
Q Consensus 158 dg~v~i~d~~~~~-~--~~------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~------------~~~~~~~ 216 (337)
++.||.-++.... . ++ ...|..+..||+|++||..+..+ |.|-.+..+.. .+.+..+
T Consensus 40 ~n~iR~~~i~~~~~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g~~~--V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~ 117 (452)
T 3pbp_A 40 DNIIRWYNVLTDSLYHSLNFSRHLVLDDTFHVISSTSGDLLCLFNDNE--IFVMEVPWGYSNVEDVSIQDAFQIFHYSID 117 (452)
T ss_dssp TTEEEEEETTTCSSCEEEECTTTCCCCTTCEEEECTTSSEEEEECSSE--EEEEECCTTCSCCCCHHHHHTTEEEEEEGG
T ss_pred CCEEEEEECCCCCcceEEecCcccccCceeEEEECCCCCEEEEecCCe--EEEEEecCccccCcccccccccceeEEEcC
Confidence 4677777766322 1 11 13688899999999999998774 57888874321 1223222
Q ss_pred C----cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 217 T----YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 217 ~----~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
. .+.+|..+.|+|-+..-..|++-..|++|++||+....
T Consensus 118 ~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~ 160 (452)
T 3pbp_A 118 EEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQ 160 (452)
T ss_dssp GCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTT
T ss_pred CcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCC
Confidence 1 13569999999876422389999999999999998743
No 297
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=96.43 E-value=0.32 Score=41.58 Aligned_cols=223 Identities=9% Similarity=0.043 Sum_probs=107.3
Q ss_pred CCCEEEEEc-CC------ceEEEeCCCCcEEEEEee--CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCC--
Q 019672 18 DNSGFALST-KD------GFKIFDSSTGRLCYERAV--GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGT-- 86 (337)
Q Consensus 18 dg~~la~g~-~~------g~~vw~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~-- 86 (337)
++..++.|+ .+ .+.+||+.+.+-...... .......... .+.+.+++|.. .....+.+.+||+.+++
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~l~v~GG~~-~~~~~~~~~~~d~~~~~~~ 91 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEWSFLPSITRKRRYVASVSL-HDRIYVIGGYD-GRSRLSSVECLDYTADEDG 91 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE-TTEEEEECCBC-SSCBCCCEEEEETTCCTTC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeEEeCCCCChhhccccEEEE-CCEEEEEcCCC-CCccCceEEEEECCCCCCC
Confidence 455666666 32 357888877642211110 0011111122 34555555421 11124679999998887
Q ss_pred -EEEEEEcCC--ceeEEEEcCCeEEEEE-------CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCC
Q 019672 87 -ALRELNFLT--SILAVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPAST 156 (337)
Q Consensus 87 -~~~~~~~~~--~v~~i~~~~~~~~v~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~ 156 (337)
....-..+. .-.++....+.+++.+ .+.+.+||+.+.+-...-..+.......+... ++.+++.+|..
T Consensus 92 ~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~ 169 (301)
T 2vpj_A 92 VWYSVAPMNVRRGLAGATTLGDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYD 169 (301)
T ss_dssp CCEEECCCSSCCBSCEEEEETTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBC
T ss_pred eeEECCCCCCCccceeEEEECCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCC
Confidence 433322221 1122223355666654 24689999877643221111111112222222 35566776632
Q ss_pred C---ccEEEEEEccCCcccc--c-----CceEEEEeCCCCCEEEEEeCCCc----EEEEEEcCCCceeE--eeccCCcce
Q 019672 157 T---KGSVLVYNVMELHSHC--E-----APLAAIVLSSNGMYIATASEQGT----IIRVFLVSEATKSY--SFRRGTYPS 220 (337)
Q Consensus 157 ~---dg~v~i~d~~~~~~~~--~-----~~i~~~~~s~dg~~lat~s~dg~----~i~vwd~~~~~~~~--~~~~~~~~~ 220 (337)
. ...+.+||+.+.+-.. . ..-.++.+ +++.++.|+.++. .+.+||+.+.+-.. .+... ..
T Consensus 170 ~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~--r~ 245 (301)
T 2vpj_A 170 GLNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTDSWTTVTSMTTP--RC 245 (301)
T ss_dssp SSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEEECCCSSC--CB
T ss_pred CCcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCCcEEECCCCCCc--cc
Confidence 1 2468889987654211 1 12223333 5677777775431 25789998775322 11111 11
Q ss_pred eEEEEEeecCCCcccEEEEEeCC-----CcEEEEecCC
Q 019672 221 TIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGF 253 (337)
Q Consensus 221 ~i~~l~fs~dg~~~~~las~s~d-----g~v~iw~l~~ 253 (337)
.-.++. -+++ +++.|+.+ ..|.+||+++
T Consensus 246 ~~~~~~--~~~~---i~v~GG~~~~~~~~~v~~yd~~~ 278 (301)
T 2vpj_A 246 YVGATV--LRGR---LYAIAGYDGNSLLSSIECYDPII 278 (301)
T ss_dssp SCEEEE--ETTE---EEEECCBCSSSBEEEEEEEETTT
T ss_pred ceeEEE--ECCE---EEEEcCcCCCcccccEEEEcCCC
Confidence 111122 2666 77777655 3577787754
No 298
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.43 E-value=0.011 Score=57.78 Aligned_cols=218 Identities=7% Similarity=-0.024 Sum_probs=109.5
Q ss_pred EcCCceEEEeCCCCcEEEEEe-eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC----CCEEEEEEc-CCcee
Q 019672 25 STKDGFKIFDSSTGRLCYERA-VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT----GTALRELNF-LTSIL 98 (337)
Q Consensus 25 g~~~g~~vw~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~----~~~~~~~~~-~~~v~ 98 (337)
.....+++.++++.+...... ......+.+.+..+.+.++.. ..++|..+++.. ......+.. -....
T Consensus 383 ~~~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~------~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~ 456 (699)
T 1n7d_A 383 TNRHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDL------SQRMICSTQLDRAHGVSSYDTVISRDIQAPD 456 (699)
T ss_dssp CCTTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCT------TTTSBEEEESCCCCC-CCCCCBCCSCC--CC
T ss_pred cCccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEec------CCCeEEEEecCCCCCCcceEEEEeCCCCCcc
Confidence 334456666776654322211 122222344444455544433 367888888765 121111111 11234
Q ss_pred EEEEc--CCeEEEEE--CCeEEEEECCCCeeeeeecC-CCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc--
Q 019672 99 AVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDT-VPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS-- 171 (337)
Q Consensus 99 ~i~~~--~~~~~v~~--d~~i~i~d~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~-- 171 (337)
+|+++ .+.++++. .+.|.++++........+.. ...+.+ ++.+|.+..|+.+.....+.|.++++.....
T Consensus 457 glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~~l~~~~~~~P~g---iavDp~~g~ly~td~~~~~~I~~~~~dG~~~~~ 533 (699)
T 1n7d_A 457 GLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREQGSKPRA---IVVDPVHGFMYWTDWGTPAKIKKGGLNGVDIYS 533 (699)
T ss_dssp CEECCCSSSBCEECCTTTSCEEEEBSSSCCEEEECCCSSCCCCC---EECCSSSSCCEECCCSSSCCEEBCCSSSCCCCE
T ss_pred eEEEEeeCCcEEEEeccCCeEEEEecCCCceEEEEeCCCCCcce---EEEccCCCcEEEcccCCCCeEEEEeCCCCCeeE
Confidence 55654 34555553 56899999865433222221 122333 3455544455554421236788877653221
Q ss_pred cc-c--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC-CcceeEEEEEeecCCCcccEEEEEeCCCcEE
Q 019672 172 HC-E--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG-TYPSTIFSLSFGQSMQFQDILVATSSSGSLH 247 (337)
Q Consensus 172 ~~-~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~-~~~~~i~~l~fs~dg~~~~~las~s~dg~v~ 247 (337)
+. . ...+.|+|+|++.+|..+......|.++|+..... ..+... ........|++..+ . ++.+....+.|.
T Consensus 534 l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~~~-~~~~~~~~~~~~P~glavd~~-~---lywtd~~~~~V~ 608 (699)
T 1n7d_A 534 LVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNR-KTILEDEKRLAHPFSLAVFED-K---VFWTDIINEAIF 608 (699)
T ss_dssp ESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSSCC-EEECCCSSSCSSCCCCEEETT-E---EEEECSTTTCEE
T ss_pred EEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCCce-EEEEecCCcCCCceEeEEECC-E---EEEEeCCCCeEE
Confidence 11 1 45678999998666655554444478888864322 222211 11111334566544 3 666667778999
Q ss_pred EEecCCCcc
Q 019672 248 VFSPGFAIN 256 (337)
Q Consensus 248 iw~l~~~~~ 256 (337)
.++..+++.
T Consensus 609 ~~d~~~G~~ 617 (699)
T 1n7d_A 609 SANRLTGSD 617 (699)
T ss_dssp EEETTTEEE
T ss_pred EEEccCCCc
Confidence 998765443
No 299
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.42 E-value=0.3 Score=43.39 Aligned_cols=135 Identities=17% Similarity=0.128 Sum_probs=73.8
Q ss_pred CCeEEEEECCC--Ceee-eeecC------CCCCceEEEEeeCCCc--cEEEEcCCCCccEEEEEEccCCc--ccc-----
Q 019672 112 REKTYIYDANT--LAIL-DTIDT------VPNLKGLCAFSPSLNA--CFLAVPASTTKGSVLVYNVMELH--SHC----- 173 (337)
Q Consensus 112 d~~i~i~d~~~--~~~~-~~~~~------~~~~~~~~~~~~~~~~--~~la~~~~~~dg~v~i~d~~~~~--~~~----- 173 (337)
++.|.++|+.+ ++.. -.+.. ..++.++.... +.++ .++++.....+.+|.+|++.... ..+
T Consensus 82 ~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~-d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~ 160 (355)
T 3sre_A 82 SGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFI-DDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIR 160 (355)
T ss_dssp CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEE-CTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEEC
T ss_pred CCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEE-CCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccc
Confidence 78899999873 2221 11221 12344443322 2223 23333322135778888765432 111
Q ss_pred ---cCceEEEEeCCCCCEEEEEeC---C------------CcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCccc
Q 019672 174 ---EAPLAAIVLSSNGMYIATASE---Q------------GTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQD 235 (337)
Q Consensus 174 ---~~~i~~~~~s~dg~~lat~s~---d------------g~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~ 235 (337)
-...+.+++.++|++.++..- | ..- +||-+..++ +..+..+ -..-+.++||||++ .
T Consensus 161 g~~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g-~vyr~d~~~-~~~~~~~--l~~pNGia~spDg~--~ 234 (355)
T 3sre_A 161 HKLLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWS-FVTYYSPND-VRVVAEG--FDFANGINISPDGK--Y 234 (355)
T ss_dssp CTTCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCE-EEEEECTTC-CEEEEEE--ESSEEEEEECTTSS--E
T ss_pred cCCCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCcc-EEEEEECCe-EEEeecC--CcccCcceECCCCC--E
Confidence 166899999999998887651 1 111 334333332 2222111 12257899999998 2
Q ss_pred EEEEEeCCCcEEEEecCC
Q 019672 236 ILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 236 ~las~s~dg~v~iw~l~~ 253 (337)
++++-+..+.|+.|+++.
T Consensus 235 lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 235 VYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp EEEEEGGGTEEEEEEECT
T ss_pred EEEEeCCCCeEEEEEECC
Confidence 445556678999999874
No 300
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=96.38 E-value=0.85 Score=44.72 Aligned_cols=216 Identities=9% Similarity=0.114 Sum_probs=125.4
Q ss_pred CCCeEEEEEcCCCCEEEEEcCCceEEEeCCCCcEEEEE--eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC
Q 019672 7 SYPVFFVSFNQDNSGFALSTKDGFKIFDSSTGRLCYER--AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT 84 (337)
Q Consensus 7 ~~~v~~~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~ 84 (337)
...|+++.-.++|. |-+|+.+|+..||..+.+..... ....+..+. .+...+.+.+ .+.|..+|..+
T Consensus 62 ~~~i~~i~~d~~g~-lWigT~~Gl~~yd~~~~~f~~~~~~~~~~i~~i~--~~~g~lWigt--------~~Gl~~~~~~~ 130 (758)
T 3ott_A 62 NTRIYCGVIIDNTY-LYMGTDNGILVYNYRADRYEQPETDFPTDVRTMA--LQGDTLWLGA--------LNGLYTYQLQS 130 (758)
T ss_dssp SSCEEEEEEETTTE-EEEEETTEEEEEETTTTEECCCSCCCCSCEEEEE--EETTEEEEEE--------TTEEEEEETTT
T ss_pred CceEEEEEEcCCCc-EEEEeCCCeEEEeCCCCEEECcccCCCceEEEEE--ecCCcEEEEc--------CCcceeEeCCC
Confidence 45699988888774 66677889999998776432210 011233222 2233444433 23688899877
Q ss_pred CCEEEEEE-----c-CCceeEEEEc-CCeEEEEECCeEEEEECCCCeeeeeecCCC----CCceEEEEeeCCCcc--EEE
Q 019672 85 GTALRELN-----F-LTSILAVRLN-KKRLVIVLREKTYIYDANTLAILDTIDTVP----NLKGLCAFSPSLNAC--FLA 151 (337)
Q Consensus 85 ~~~~~~~~-----~-~~~v~~i~~~-~~~~~v~~d~~i~i~d~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~--~la 151 (337)
++.. .+. . ...|.++..+ ...+.+++.+-+..||..+.+.. .+..+. ....+.++..+.++. +++
T Consensus 131 ~~~~-~~~~~~~~l~~~~i~~i~~d~~g~lWigt~~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~i~~i~~d~~~~~lWig 208 (758)
T 3ott_A 131 RKLT-SFDTRRNGLPNNTIYSIIRTKDNQIYVGTYNGLCRYIPSNGKFE-GIPLPVHSSQSNLFVNSLLEDTTRQCVWIG 208 (758)
T ss_dssp CCEE-EECHHHHCCSCSCEEEEEECTTCCEEEEETTEEEEEETTTTEEE-EECCCCCTTCSSCCEEEEEEETTTTEEEEE
T ss_pred CeEE-EeccCCCCcCCCeEEEEEEcCCCCEEEEeCCCHhhCccCCCceE-EecCCCccccccceeEEEEEECCCCEEEEE
Confidence 6543 231 1 2357788776 45677777778888998766432 222111 112355666665443 443
Q ss_pred EcCCCCccEEEEEEccCCccc-----ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccC------Ccce
Q 019672 152 VPASTTKGSVLVYNVMELHSH-----CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRG------TYPS 220 (337)
Q Consensus 152 ~~~~~~dg~v~i~d~~~~~~~-----~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~------~~~~ 220 (337)
+ ++-+..+|..+.+.. ....|.++...++|.+.+. +..| +.+++..+++.. .+... ....
T Consensus 209 t-----~~Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~G--l~~~~~~~~~~~-~~~~~~~~~~~l~~~ 279 (758)
T 3ott_A 209 T-----EGYLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDNG--LYVYHNDTTPLQ-HIIHDSRNIQSLTNN 279 (758)
T ss_dssp E-----EEEEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETTE--EEEECCTTSCCE-EECCCTTCTTSCSCS
T ss_pred E-----CCCCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCCc--eeEEecCCCcEE-EEEcCCCCcCcCCcC
Confidence 3 234778887665432 1256889999999886654 4555 457887765432 22111 1123
Q ss_pred eEEEEEeecCCCcccEEEEEeCCCcEEEE
Q 019672 221 TIFSLSFGQSMQFQDILVATSSSGSLHVF 249 (337)
Q Consensus 221 ~i~~l~fs~dg~~~~~las~s~dg~v~iw 249 (337)
.|.++....+|. |-.|+..| +.++
T Consensus 280 ~i~~i~~D~~g~----lWiGT~~G-l~~~ 303 (758)
T 3ott_A 280 IIWNIFADQEHN----IWLGTDYG-ISLS 303 (758)
T ss_dssp CEEEEEECTTCC----EEEEESSS-EEEE
T ss_pred eEEEEEEcCCCC----EEEEeCCc-cccc
Confidence 599998888887 44455556 4444
No 301
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.33 E-value=0.6 Score=42.50 Aligned_cols=222 Identities=13% Similarity=0.173 Sum_probs=119.1
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEE
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 151 (337)
...|.|-|+..+..+.+-..... +.-.+|...+++. ...+.|||+.+.+.+..+.... .+.-+.+-.+. .|+
T Consensus 47 ~~~vvIiDl~~~~~~~rrpi~Ad--sAIMnP~~~iiALrag~~lQiFnle~K~klks~~~~e---~VvfWkWis~~-~l~ 120 (494)
T 1bpo_A 47 QAQVVIIDMNDPSNPIRRPISAD--SAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTD---DVTFWKWISLN-TVA 120 (494)
T ss_dssp CCEEEEEETTSTTSCEEEECCCS--EEEECSSSSCEEEEETTEEEEEETTTTEEEEEEECSS---CCCEEEEEETT-EEE
T ss_pred CCeEEEEECCCCCcceecccccc--eeeeCCCCcEEEEecCCeEEEEchHHhhhhcceecCC---CceEEEecCCC-eEE
Confidence 55899999988765544333221 1123554444444 7799999999998888876543 34445543222 444
Q ss_pred EcCCCCccEEEEEEccCCccc------c----cCceEEEEeCCCCCEEEEEe---CC----CcEEEEEEcCCCceeEeec
Q 019672 152 VPASTTKGSVLVYNVMELHSH------C----EAPLAAIVLSSNGMYIATAS---EQ----GTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 152 ~~~~~~dg~v~i~d~~~~~~~------~----~~~i~~~~~s~dg~~lat~s---~d----g~~i~vwd~~~~~~~~~~~ 214 (337)
... +..|.-|++...... | ...|..-..+++.++++..+ .+ |. +.+|..+.+.. +.+
T Consensus 121 lVT---~taVyHWsi~~~s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~-mQLYS~er~~s-Q~i- 194 (494)
T 1bpo_A 121 LVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA-MQLYSVDRKVS-QPI- 194 (494)
T ss_dssp EEC---SSEEEEEESSSSCCCEEEEECCGGGTTCEEEEEEECTTSSEEEEEEEEEETTEEEEE-EEEEESTTCCE-EEE-
T ss_pred EEc---CCeeEEecccCCCCchhheecchhcccceEEEEEECCCCCeEEEEeecccCCcccce-EEEeecccccc-chh-
Confidence 443 567999998642211 1 16688888899999887543 23 44 57888876542 222
Q ss_pred cCCcceeEEEEEeecCCC--cccEEEEEeCC---CcEEEEecCCCcccCCCCcccccccccccccceeecccccceeeee
Q 019672 215 RGTYPSTIFSLSFGQSMQ--FQDILVATSSS---GSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLRN 289 (337)
Q Consensus 215 ~~~~~~~i~~l~fs~dg~--~~~~las~s~d---g~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~ 289 (337)
.|| -+.-.. |-.+|. .++.++-+... +.+||-++.++....++-.....--.+.|+.. ..++.
T Consensus 195 eGh-aa~F~~--~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~------~DFPv--- 262 (494)
T 1bpo_A 195 EGH-AASFAQ--FKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ------NDFPV--- 262 (494)
T ss_dssp CCS-EEEEEE--EECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTST------TCCEE---
T ss_pred eee-eeeeEE--EecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccc------cCcee---
Confidence 232 222212 212221 01134444333 78999999765211110000000001111110 11111
Q ss_pred ccCCCcccCEEEEEEeCCcEEEEEEecCCC
Q 019672 290 AFPAGVKRASVSVITYNGYFVEYIFSINNC 319 (337)
Q Consensus 290 ~~~~~~~~~~l~~~~~dg~~~~~~~~~~~~ 319 (337)
++..+++-.-++..+.-|.+++|++.+-.+
T Consensus 263 amqvs~kygviyviTK~G~i~lyDleTgt~ 292 (494)
T 1bpo_A 263 AMQISEKHDVVFLITKYGYIHLYDLETGTC 292 (494)
T ss_dssp EEEEETTTTEEEEEETTSEEEEEETTTCCE
T ss_pred EEEecccCCEEEEEecCceEEEEeccccee
Confidence 111234457899999999999998866554
No 302
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.32 E-value=0.53 Score=41.77 Aligned_cols=163 Identities=15% Similarity=0.125 Sum_probs=88.7
Q ss_pred CCceEEEEECCC--CCEEEEEEcC--------CceeEEEEcC---C--eEEEEE----CCeEEEEECCCC----eeeeee
Q 019672 73 SPRRLCLFNTTT--GTALRELNFL--------TSILAVRLNK---K--RLVIVL----REKTYIYDANTL----AILDTI 129 (337)
Q Consensus 73 ~d~~v~iwd~~~--~~~~~~~~~~--------~~v~~i~~~~---~--~~~v~~----d~~i~i~d~~~~----~~~~~~ 129 (337)
.++.|.++|+++ .+. .++... -....|.+.. + +++++. +.+|.+|++... ..+.++
T Consensus 81 ~~G~I~~~d~~~~~~~~-~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~ 159 (355)
T 3sre_A 81 KSGKILLMDLNEKEPAV-SELEIIGNTLDISSFNPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTI 159 (355)
T ss_dssp -CCEEEEEETTSSSCCE-EECEEECSSCCGGGCCEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEE
T ss_pred CCCeEEEEecCCCCCce-EEEEccCCCCCcCceeeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEecc
Confidence 488999999874 332 222211 1556677633 2 366664 347777776432 223333
Q ss_pred cCCCCCceEEEEeeCCCccEEEEcCC---------------CCccEEEEEEccCCccccc--CceEEEEeCCCCCEEEEE
Q 019672 130 DTVPNLKGLCAFSPSLNACFLAVPAS---------------TTKGSVLVYNVMELHSHCE--APLAAIVLSSNGMYIATA 192 (337)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~la~~~~---------------~~dg~v~i~d~~~~~~~~~--~~i~~~~~s~dg~~lat~ 192 (337)
... .......+..++++.+.++... ...|.|.-+|....+.+.. ..-+.++|||||+.|..+
T Consensus 160 ~g~-~~~~pND~~v~~~G~fyvt~~~~ftd~~~~~~e~~~~~~~g~vyr~d~~~~~~~~~~l~~pNGia~spDg~~lYva 238 (355)
T 3sre_A 160 RHK-LLPSVNDIVAVGPEHFYATNDHYFIDPYLKSWEMHLGLAWSFVTYYSPNDVRVVAEGFDFANGINISPDGKYVYIA 238 (355)
T ss_dssp CCT-TCSSEEEEEEEETTEEEEEESCSCSSHHHHHHHHHTTCCCEEEEEECTTCCEEEEEEESSEEEEEECTTSSEEEEE
T ss_pred ccC-CCCCCceEEEeCCCCEEecCCcEeCCcccccchhhccCCccEEEEEECCeEEEeecCCcccCcceECCCCCEEEEE
Confidence 321 1122334444556665554320 0135566666532222222 567999999999988777
Q ss_pred eCCCcEEEEEEcCC-Ccee--EeeccCCcceeEEEEEeec-CCCcccEEEEEeCC
Q 019672 193 SEQGTIIRVFLVSE-ATKS--YSFRRGTYPSTIFSLSFGQ-SMQFQDILVATSSS 243 (337)
Q Consensus 193 s~dg~~i~vwd~~~-~~~~--~~~~~~~~~~~i~~l~fs~-dg~~~~~las~s~d 243 (337)
......|..|++.. |+.. ..+.. ....-.+++.+ +|. +.+++..+
T Consensus 239 dt~~~~I~~~~~~~~g~l~~~~~~~~---~g~PDGi~vD~e~G~---lwva~~~~ 287 (355)
T 3sre_A 239 ELLAHKIHVYEKHANWTLTPLRVLSF---DTLVDNISVDPVTGD---LWVGCHPN 287 (355)
T ss_dssp EGGGTEEEEEEECTTSCEEEEEEEEC---SSEEEEEEECTTTCC---EEEEEESC
T ss_pred eCCCCeEEEEEECCCCcEecCEEEeC---CCCCceEEEeCCCCc---EEEEecCC
Confidence 65444578899863 4321 12211 23456788888 588 66655544
No 303
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.25 E-value=1 Score=44.48 Aligned_cols=172 Identities=10% Similarity=0.017 Sum_probs=98.0
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcC--CeEEEEE--CCeEEEEECCCC----eeeeeec-CCCCCceEEEEeeC
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTL----AILDTID-TVPNLKGLCAFSPS 144 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~----~~~~~~~-~~~~~~~~~~~~~~ 144 (337)
...|+..++........+.....+.+|+++. +.++++. .+.|+.+++... .....+. ....+.+ +++.
T Consensus 403 ~~~Ir~i~l~~~~~~~l~~~~~~~~gl~~d~~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~G-LAvD-- 479 (791)
T 3m0c_C 403 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG-LAVD-- 479 (791)
T ss_dssp BSSEEEECTTSCCCEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCE-EEEE--
T ss_pred ccceeEeeccCCcceeeecCCCceEEEeecccCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcce-eeee--
Confidence 3567777877665544444445677888864 5566665 568888888642 1122222 1122323 3444
Q ss_pred CCccEEEEcCCCCccEEEEEEccCCccc--c---cCceEEEEeCCCCCEEEEEe-CC-CcEEEEEEcCCCceeEeeccCC
Q 019672 145 LNACFLAVPASTTKGSVLVYNVMELHSH--C---EAPLAAIVLSSNGMYIATAS-EQ-GTIIRVFLVSEATKSYSFRRGT 217 (337)
Q Consensus 145 ~~~~~la~~~~~~dg~v~i~d~~~~~~~--~---~~~i~~~~~s~dg~~lat~s-~d-g~~i~vwd~~~~~~~~~~~~~~ 217 (337)
..+..|..+.. ..+.|.+.++...... . ......|+++|.+.+|.-+. .. +. |.+.++... ....+...
T Consensus 480 ~~~~~LY~tD~-~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~-I~~~~~dG~-~~~~lv~~- 555 (791)
T 3m0c_C 480 WIHSNIYWTDS-VLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLNGV-DIYSLVTE- 555 (791)
T ss_dssp TTTTEEEEEET-TTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSC-CEEEEECS-
T ss_pred ecCCcEEEEec-CCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCe-EEEEecCCC-ceEEEEeC-
Confidence 33434444443 4789999998754321 1 15588999999755555443 33 44 677887643 33333221
Q ss_pred cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 218 YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 218 ~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
.-.....|++++.+. .++.+-...+.|..++++..
T Consensus 556 ~l~~P~GLavD~~~~--~LYwaD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 556 NIQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNGG 590 (791)
T ss_dssp SCSCEEEEEEETTTT--EEEEEETTTTEEEEEETTSC
T ss_pred CCCCceEEEEecCCC--eEEEEeCCCCcEEEEecCCC
Confidence 123467899997766 14444455677999988643
No 304
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.23 E-value=0.55 Score=41.09 Aligned_cols=172 Identities=10% Similarity=0.078 Sum_probs=95.5
Q ss_pred CCceEEEEECCCCCEEEEEEcCC---------ceeEEEE---cCC-eEEEEEC---------------CeEEEEECC---
Q 019672 73 SPRRLCLFNTTTGTALRELNFLT---------SILAVRL---NKK-RLVIVLR---------------EKTYIYDAN--- 121 (337)
Q Consensus 73 ~d~~v~iwd~~~~~~~~~~~~~~---------~v~~i~~---~~~-~~~v~~d---------------~~i~i~d~~--- 121 (337)
..++|..||...+..... .++. .+.+|.+ +++ +++++.+ ..+..||+.
T Consensus 33 ~~g~V~~~~~~~~~~~~~-~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~ 111 (334)
T 2p9w_A 33 YKGRIEVYNPKTQSHFNV-VIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFADQSSHGASSFHSFNLPLSE 111 (334)
T ss_dssp TTTEEEEECTTTCCEEEE-CCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTTSCCSSSCCEEEEEESSCCT
T ss_pred cCCEEEEEcCCCCeEEEE-ecCCccccCCCcceeeEEEEeccCCCCcEEEEEcccccccccccccCCCCEEEEEcCCcCC
Confidence 478999999876654332 3322 3578899 454 5555433 569999998
Q ss_pred CCeeeeeecCCC-----------CCceEEEEeeCCCccEEEEcCCCCc-cEEE----------EEEccCCcccccCceEE
Q 019672 122 TLAILDTIDTVP-----------NLKGLCAFSPSLNACFLAVPASTTK-GSVL----------VYNVMELHSHCEAPLAA 179 (337)
Q Consensus 122 ~~~~~~~~~~~~-----------~~~~~~~~~~~~~~~~la~~~~~~d-g~v~----------i~d~~~~~~~~~~~i~~ 179 (337)
+++.+..+.... .......+..++++...++.+. . +.|. .|.+...........+.
T Consensus 112 tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~--~~~~I~rV~pdG~~~~~~~~~~~~~~~~~G~nG 189 (334)
T 2p9w_A 112 NSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFAL--GMPAIARVSADGKTVSTFAWESGNGGQRPGYSG 189 (334)
T ss_dssp TCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEE--SSCEEEEECTTSCCEEEEEECCCCSSSCCSCSE
T ss_pred CCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCC--CCCeEEEEeCCCCEEeeeeecCCCcccccCcce
Confidence 777665543210 1123456666777665554332 2 3333 34332211111234779
Q ss_pred EEeCCCCCEEEEEeCCCcEEEEEEcCCCce--eEeecc-CCc-c-eeEEE-EEeecCCCcccE-EEEEeCCCcEEEEecC
Q 019672 180 IVLSSNGMYIATASEQGTIIRVFLVSEATK--SYSFRR-GTY-P-STIFS-LSFGQSMQFQDI-LVATSSSGSLHVFSPG 252 (337)
Q Consensus 180 ~~~s~dg~~lat~s~dg~~i~vwd~~~~~~--~~~~~~-~~~-~-~~i~~-l~fs~dg~~~~~-las~s~dg~v~iw~l~ 252 (337)
|+++|+|++|++....|.+ ..+|+.+... +. ..+ +.. . ..... +.--.+|+ . |++.+..+.+.+.+-+
T Consensus 190 Iv~~pdg~~Liv~~~~g~L-~~fD~~~pv~~~v~-~~~~G~~~~~~~~dgilp~~~~G~---vllV~~~~~~~~~l~S~D 264 (334)
T 2p9w_A 190 ITFDPHSNKLIAFGGPRAL-TAFDVSKPYAWPEP-VKINGDFGTLSGTEKIVTVPVGNE---SVLVGARAPYAISFRSWD 264 (334)
T ss_dssp EEEETTTTEEEEESSSSSE-EEEECSSSSCCCEE-CEESSCCCCCTTEEEEEEEEETTE---EEEEEEETTEEEEEECSS
T ss_pred EEEeCCCCEEEEEcCCCeE-EEEcCCCCcceeec-ccccCCcccccCcccccccccCCE---EEEEEcCCCCEEEEECCC
Confidence 9999999988888778875 6789875433 21 110 110 0 01122 33335677 6 5555556666565543
No 305
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.18 E-value=0.57 Score=40.79 Aligned_cols=222 Identities=9% Similarity=-0.004 Sum_probs=122.6
Q ss_pred EEEEEcCCceEEEeCCCCc--EEEEE-eeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEE-EEE-EcCC
Q 019672 21 GFALSTKDGFKIFDSSTGR--LCYER-AVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTAL-REL-NFLT 95 (337)
Q Consensus 21 ~la~g~~~g~~vw~~~~~~--~~~~~-~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~-~~~-~~~~ 95 (337)
+|+.+....++..++++.. ..... .......+++.+..+.+..+.. ..+.|..+++..+... ..+ ..-.
T Consensus 6 ~ll~~~~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~------~~~~I~r~~~~g~~~~~~~~~~~l~ 79 (318)
T 3sov_A 6 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLL 79 (318)
T ss_dssp EEEEECEEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEET------TTTEEEEEETTSSSCCCEEEEECCS
T ss_pred EEEEEccCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEEC------CCCcEEEEEccCCCceEEEEcCCCC
Confidence 4555666678888887763 11111 1122233444444566666554 4688999998766321 111 1112
Q ss_pred ceeEEEEc--CCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc
Q 019672 96 SILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS 171 (337)
Q Consensus 96 ~v~~i~~~--~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~ 171 (337)
...+++++ ...++++. .+.|.++++........+.... ..-.+++.+|.+..|..+.....+.|...++.....
T Consensus 80 ~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~--~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 80 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQEL--DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp CCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSC--SSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CccEEEEEcCCCeEEEEECCCCEEEEEECCCCcEEEEEeCCC--CCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 34556665 45566665 5689999986532221221111 122344555544455444321257788888763221
Q ss_pred --cc-c--CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcE
Q 019672 172 --HC-E--APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSL 246 (337)
Q Consensus 172 --~~-~--~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v 246 (337)
+. . ...+.|+++|++..|..+......|..+|+.... ...+..+. ......|++..+ . ++.+-...+.|
T Consensus 158 ~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~-~~~~~~~~-~~~P~glav~~~-~---lywtd~~~~~V 231 (318)
T 3sov_A 158 FIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN-RQAVVKGS-LPHPFALTLFED-I---LYWTDWSTHSI 231 (318)
T ss_dssp EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CEEEECSC-CSCEEEEEEETT-E---EEEEETTTTEE
T ss_pred EEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCCc-eEEEecCC-CCCceEEEEeCC-E---EEEEecCCCeE
Confidence 11 1 4568999999777777666554557888986432 22332211 123466777543 4 67777777889
Q ss_pred EEEecCCCcc
Q 019672 247 HVFSPGFAIN 256 (337)
Q Consensus 247 ~iw~l~~~~~ 256 (337)
..++..+++.
T Consensus 232 ~~~~~~~G~~ 241 (318)
T 3sov_A 232 LACNKYTGEG 241 (318)
T ss_dssp EEEETTTCCS
T ss_pred EEEECCCCCc
Confidence 9999866544
No 306
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=95.99 E-value=0.71 Score=40.20 Aligned_cols=171 Identities=15% Similarity=0.005 Sum_probs=96.1
Q ss_pred CceEEEEECCCCC--EEEEEEcCCceeEEEEcC--CeEEEEE--CCeEEEEECCCCeeee-eecC-CCCCceEEEEeeCC
Q 019672 74 PRRLCLFNTTTGT--ALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANTLAILD-TIDT-VPNLKGLCAFSPSL 145 (337)
Q Consensus 74 d~~v~iwd~~~~~--~~~~~~~~~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~~~~~-~~~~-~~~~~~~~~~~~~~ 145 (337)
.+.|+..|+.... ....+..-....++.|++ +.++.+. .+.|..+++....... .+.. ...+.+ +++ ++
T Consensus 12 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~ld~d~~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~g-lav--d~ 88 (318)
T 3sov_A 12 RRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDG-LAC--DW 88 (318)
T ss_dssp EEEEEEEETTCTTSCCEEEEEEEEEEEEEEEEGGGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCE-EEE--ET
T ss_pred cCeEEEEECCCCceEEEEEecCCCccEEEEEEeCCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccE-EEE--Ec
Confidence 4689999988763 112222223566778864 5666665 5689999886653211 1111 112222 233 33
Q ss_pred CccEEEEcCCCCccEEEEEEccCCcc--cc---cCceEEEEeCCCCCEEEEEe-C-CCcEEEEEEcCCCceeEeeccCCc
Q 019672 146 NACFLAVPASTTKGSVLVYNVMELHS--HC---EAPLAAIVLSSNGMYIATAS-E-QGTIIRVFLVSEATKSYSFRRGTY 218 (337)
Q Consensus 146 ~~~~la~~~~~~dg~v~i~d~~~~~~--~~---~~~i~~~~~s~dg~~lat~s-~-dg~~i~vwd~~~~~~~~~~~~~~~ 218 (337)
.+..|..+.. ..+.|.++++..... +. ......++++|.+.+|..+. . .+. |...++. |.....+-.. .
T Consensus 89 ~~g~ly~~d~-~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~-I~r~~~d-G~~~~~~~~~-~ 164 (318)
T 3sov_A 89 LGEKLYWTDS-ETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPK-IERAGMD-GSSRFIIINS-E 164 (318)
T ss_dssp TTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCE-EEEEETT-SCSCEEEECS-S
T ss_pred CCCeEEEEEC-CCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCE-EEEEEcC-CCCeEEEEEC-C
Confidence 2223333332 367899999865322 11 15678999999755555544 2 344 5677765 3322222111 1
Q ss_pred ceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 219 PSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 219 ~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
-..-+.|+|+|++. .++.+-+..+.|..++++.
T Consensus 165 l~~Pnglavd~~~~--~lY~aD~~~~~I~~~d~dG 197 (318)
T 3sov_A 165 IYWPNGLTLDYEEQ--KLYWADAKLNFIHKSNLDG 197 (318)
T ss_dssp CSCEEEEEEETTTT--EEEEEETTTTEEEEEETTS
T ss_pred CCCccEEEEeccCC--EEEEEECCCCEEEEEcCCC
Confidence 12357899998666 2555556678899999864
No 307
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=95.87 E-value=2 Score=44.41 Aligned_cols=133 Identities=11% Similarity=0.119 Sum_probs=85.2
Q ss_pred CceEEEEECCCCCEEEEEEcCC--ceeEEEEcCCeEEEEECCeEEEEECCCCee--eeeecCCCCCceEEEEeeCCC---
Q 019672 74 PRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVLREKTYIYDANTLAI--LDTIDTVPNLKGLCAFSPSLN--- 146 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~v~~d~~i~i~d~~~~~~--~~~~~~~~~~~~~~~~~~~~~--- 146 (337)
.+.|++.+...+..+.++..+. .|...+.+...++++.++.+.++.+..++. ...... +..+.|++..+.
T Consensus 491 ~~~Irli~~~~~~~~~~w~~p~~~~I~~As~n~~~vvva~g~~l~~fel~~~~L~~~~~~~l---~~evscl~i~~~~~~ 567 (1158)
T 3ei3_A 491 SASVRLVSQEPKALVSEWKEPQAKNISVASCNSSQVVVAVGRALYYLQIHPQELRQISHTEM---EHEVACLDITPLGDS 567 (1158)
T ss_dssp SSCEEEEESSSCCEEEEECCTTCCCCCEEEECSSEEEEEETTEEEEEEEETTEEEEEEEEEC---SSCEEEEECCCCSSS
T ss_pred cCEEEEEECCCCeEEEEEECCCCCEEEEEEeCCCEEEEEECCEEEEEEeeCCceeeecccCC---CCceEEEEeecCCCC
Confidence 4578888887767777776543 688888888888888777888888765532 222222 224666665431
Q ss_pred ---ccEEEEcCCCCccEEEEEEccCCccccc------CceEEEEeC--CCCCEEEEEeCCCcEEE-EEEcCCCcee
Q 019672 147 ---ACFLAVPASTTKGSVLVYNVMELHSHCE------APLAAIVLS--SNGMYIATASEQGTIIR-VFLVSEATKS 210 (337)
Q Consensus 147 ---~~~la~~~~~~dg~v~i~d~~~~~~~~~------~~i~~~~~s--~dg~~lat~s~dg~~i~-vwd~~~~~~~ 210 (337)
..++|.+-. .|++|+|+++.+.+.... ....++.+. ....+|..|-.||.+++ .+|..+|+..
T Consensus 568 ~~~s~~~aVg~~-~d~tv~I~sL~~l~~~~~~~L~~~~~p~si~l~~~~~~~~L~igl~dG~l~~~~~d~~tg~l~ 642 (1158)
T 3ei3_A 568 NGLSPLCAIGLW-TDISARILKLPSFELLHKEMLGGEIIPRSILMTTFESSHYLLCALGDGALFYFGLNIETGLLS 642 (1158)
T ss_dssp TTCCSEEEEEET-TTTEEEEEETTTCCEEEEEECCSSCCEEEEEEEEETTEEEEEEEETTSEEEEEEECTTTCCEE
T ss_pred cccccEEEEEEC-CCCEEEEEECCCCCeEEEEECCCCCCCcEEEEEEeCCCcEEEEEeCCCeEEEEEEcCCCCccc
Confidence 356776652 389999999987654432 233444332 23357889999998654 3565666654
No 308
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=95.79 E-value=0.87 Score=39.66 Aligned_cols=145 Identities=9% Similarity=0.029 Sum_probs=79.1
Q ss_pred CceeEEEEcCCe-EEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCC---
Q 019672 95 TSILAVRLNKKR-LVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMEL--- 169 (337)
Q Consensus 95 ~~v~~i~~~~~~-~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~--- 169 (337)
..+.++.+.++. ++++. .+.++.-+=..++.-..+.. .....+..+...+++.+++.+. +|.+.+.+...+
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~G~~~~S~d~gG~tW~~~~~-~~~~~~~~~~~~~~g~~~~~~~---~G~~~~s~~D~G~tW 238 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSRGSFYSTWEPGQTAWEPHNR-TTSRRLHNMGFTPDGRLWMIVN---GGKIAFSDPDNSENW 238 (327)
T ss_dssp CCEEEEEECTTSCEEEEETTSSEEEEECTTCSSCEEEEC-CSSSCEEEEEECTTSCEEEEET---TTEEEEEETTEEEEE
T ss_pred cceEEEEEcCCCcEEEEECCCcEEEEeCCCCCceeECCC-CCCCccceeEECCCCCEEEEeC---CceEEEecCCCCCee
Confidence 467778876554 33333 55544432111222122211 1233455666667776666543 577777632111
Q ss_pred ccc------ccCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCC-cceeEEEEEeecCCCcccEEEEEeC
Q 019672 170 HSH------CEAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGT-YPSTIFSLSFGQSMQFQDILVATSS 242 (337)
Q Consensus 170 ~~~------~~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~-~~~~i~~l~fs~dg~~~~~las~s~ 242 (337)
... ....+.++++.|++..++.+. +|. | .+....|+.-..+..+. .+..++++.|.++++ +++++.
T Consensus 239 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~-i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~----~~~~G~ 311 (327)
T 2xbg_A 239 GELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGA-L-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ----GFILGQ 311 (327)
T ss_dssp CCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTC-E-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE----EEEECS
T ss_pred EeccCCcccCCcceEEEEecCCCEEEEEeC-CCe-E-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc----eEEEcC
Confidence 111 113588999999888777654 666 3 45555565444343221 134578899986664 667778
Q ss_pred CCcEEEEe
Q 019672 243 SGSLHVFS 250 (337)
Q Consensus 243 dg~v~iw~ 250 (337)
+|+|.-++
T Consensus 312 ~G~i~~~~ 319 (327)
T 2xbg_A 312 KGILLRYV 319 (327)
T ss_dssp TTEEEEEC
T ss_pred CceEEEEc
Confidence 89776655
No 309
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.71 E-value=0.92 Score=39.91 Aligned_cols=107 Identities=11% Similarity=0.174 Sum_probs=61.8
Q ss_pred EEEEEcCCc-eEEEeCCCCcEEEEEeeCC-EEEEEEc-c---CCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC
Q 019672 21 GFALSTKDG-FKIFDSSTGRLCYERAVGA-FSIVEML-Y---SSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL 94 (337)
Q Consensus 21 ~la~g~~~g-~~vw~~~~~~~~~~~~~~~-~~~~~~~-~---~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~ 94 (337)
.+++++.+| +.-+|.++|+++...+... ...+... + ....+.++.. +.|+.|..+|.++|.....+..+
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p-----~~dG~l~a~~~~~G~~~~~~~~~ 86 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPENFQPLIEIQEPSRLETYETLIIEP-----FGDGNIYYFNAHQGLQKLPLSIR 86 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGGSCCSEECCCSCTTTSSEEEEECC-----STTTEEEEEETTTEEEEEEEEHH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCccCCcEEecCCccccCCcEEEEEE-----CCCCEEEEEECCCCcEEeeeccc
Confidence 455666555 5888888888887765430 1111111 1 1123333431 24899999999988665555433
Q ss_pred C-----ceeE---EEE-------cCCeEEEEE-CCeEEEEECCCCeeeeeecCC
Q 019672 95 T-----SILA---VRL-------NKKRLVIVL-REKTYIYDANTLAILDTIDTV 132 (337)
Q Consensus 95 ~-----~v~~---i~~-------~~~~~~v~~-d~~i~i~d~~~~~~~~~~~~~ 132 (337)
. ++.. ..+ ..+.+++.. ++++...|+.+|+.+.++...
T Consensus 87 ~lv~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l~ald~~tG~~~W~~~~~ 140 (339)
T 2be1_A 87 QLVSTSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIMYTINMLNGEIISAFGPG 140 (339)
T ss_dssp HHHTTCSEEEECC----------CCEEEEECEEEEEEEEEETTTCCEEEEESTT
T ss_pred cceeccccccCCCceeecccccccCCEEEEEecCCEEEEEECCCCcEEEEEecC
Confidence 2 2221 001 233333444 889999999999999888653
No 310
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.62 E-value=0.029 Score=54.82 Aligned_cols=171 Identities=11% Similarity=0.020 Sum_probs=92.8
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcC--CeEEEEE--CCeEEEEECCC----CeeeeeecC-CCCCceEEEEeeC
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNK--KRLVIVL--REKTYIYDANT----LAILDTIDT-VPNLKGLCAFSPS 144 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~----~~~~~~~~~-~~~~~~~~~~~~~ 144 (337)
.+.|+..++.+.+....+.....+.++++++ +.++++. .+.|+.+++.. ......+.. ...+.+ ++.+
T Consensus 385 ~~~I~~id~~~~~~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~g---lavD 461 (699)
T 1n7d_A 385 RHEVRKMTLDRSEYTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDG---LAVD 461 (699)
T ss_dssp TTC-CEECTTSCCEECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCC---EECC
T ss_pred ccceEEEeCCCCcceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcce---EEEE
Confidence 4577888887766544333334566777764 4455554 56899998865 222222211 112223 3444
Q ss_pred CCccEEEEcCCCCccEEEEEEccCCccc---cc--CceEEEEeCCCCCEEEEEe-CC-CcEEEEEEcCCCceeEeeccCC
Q 019672 145 LNACFLAVPASTTKGSVLVYNVMELHSH---CE--APLAAIVLSSNGMYIATAS-EQ-GTIIRVFLVSEATKSYSFRRGT 217 (337)
Q Consensus 145 ~~~~~la~~~~~~dg~v~i~d~~~~~~~---~~--~~i~~~~~s~dg~~lat~s-~d-g~~i~vwd~~~~~~~~~~~~~~ 217 (337)
+.+..|..+.. ..+.|.++++...... .. .....|+++|++.+|..+. .. ++ |.++++.. .....+...
T Consensus 462 ~~~g~LY~tD~-~~~~I~v~d~dg~~~~~l~~~~~~~P~giavDp~~g~ly~td~~~~~~-I~~~~~dG-~~~~~l~~~- 537 (699)
T 1n7d_A 462 WIHSNIYWTDS-VLGTVSVADTKGVKRKTLFREQGSKPRAIVVDPVHGFMYWTDWGTPAK-IKKGGLNG-VDIYSLVTE- 537 (699)
T ss_dssp CSSSBCEECCT-TTSCEEEEBSSSCCEEEECCCSSCCCCCEECCSSSSCCEECCCSSSCC-EEBCCSSS-CCCCEESCS-
T ss_pred eeCCcEEEEec-cCCeEEEEecCCCceEEEEeCCCCCcceEEEccCCCcEEEcccCCCCe-EEEEeCCC-CCeeEEEeC-
Confidence 32333334433 4678999998754321 11 4567899999655444333 22 45 56666643 222222111
Q ss_pred cceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 218 YPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 218 ~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
.-...+.|+|+|++. .++++-+..+.|.++++..
T Consensus 538 ~l~~PnGlavd~~~~--~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 538 NIQWPNGITLDLLSG--RLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp SCSSCCCEEECTTTC--CEEEEETTTTEEEEECSSS
T ss_pred CCCCccEEEEeccCC--EEEEEecCCCeEEEEccCC
Confidence 111245789998765 2666666778899999864
No 311
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=95.24 E-value=0.058 Score=47.63 Aligned_cols=139 Identities=16% Similarity=0.131 Sum_probs=76.1
Q ss_pred eEEEEE-CCeEEEEECCCCeeeeeecCCCCCceEEEEe-eC--CCccEEEEcCCCCccEEEEEEccCCccccc-------
Q 019672 106 RLVIVL-REKTYIYDANTLAILDTIDTVPNLKGLCAFS-PS--LNACFLAVPASTTKGSVLVYNVMELHSHCE------- 174 (337)
Q Consensus 106 ~~~v~~-d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~la~~~~~~dg~v~i~d~~~~~~~~~------- 174 (337)
.+++++ |+.|+-+|..+|+.+.++.... ........ +. .++..++.... .||.|..+|..++.....
T Consensus 12 ~V~v~t~dG~l~Ald~~tG~~~W~~~~~~-~~p~~~~~~~~~~~~~~~~vv~p~-~dG~l~a~~~~~G~~~~~~~~~~lv 89 (339)
T 2be1_A 12 ILIAADVEGGLHAVDRRNGHIIWSIEPEN-FQPLIEIQEPSRLETYETLIIEPF-GDGNIYYFNAHQGLQKLPLSIRQLV 89 (339)
T ss_dssp EEEEEETTSCEEEEETTTTEEEEEECGGG-SCCSEECCCSCTTTSSEEEEECCS-TTTEEEEEETTTEEEEEEEEHHHHH
T ss_pred EEEEEeCCCeEEEEECCCCcEEEEecCCc-cCCcEEecCCccccCCcEEEEEEC-CCCEEEEEECCCCcEEeeeccccce
Confidence 345555 8999999999999988886541 01111111 10 12223333211 378888888776643211
Q ss_pred --CceEE---EEe-CC----CCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCccee-----EEEEE---ee--cCCCcc
Q 019672 175 --APLAA---IVL-SS----NGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPST-----IFSLS---FG--QSMQFQ 234 (337)
Q Consensus 175 --~~i~~---~~~-s~----dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~-----i~~l~---fs--~dg~~~ 234 (337)
.|+.. ..+ .+ .+..+.+|+.+|++ ...|+++|+.+.++..+..... ..|.. +. ..+.
T Consensus 90 ~~SP~~~~~~pvv~~~~~~~~~g~Vy~Gs~~g~l-~ald~~tG~~~W~~~~~~~~~~~~~~~e~~~~~~d~~~d~~~~-- 166 (339)
T 2be1_A 90 STSPLHLKTNIVVNDSGKIVEDEKVYTGSMRTIM-YTINMLNGEIISAFGPGSKNGYFGSQSVDCSPEEKIKLQECEN-- 166 (339)
T ss_dssp TTCSEEEECC----------CCEEEEECEEEEEE-EEEETTTCCEEEEESTTCBCC--------------------CC--
T ss_pred eccccccCCCceeecccccccCCEEEEEecCCEE-EEEECCCCcEEEEEecCCCcccccccccccccccccccccCCC--
Confidence 33321 001 01 34578889999985 6899999999999865431111 01111 10 1123
Q ss_pred cEEEEEeCCCcEEEEe
Q 019672 235 DILVATSSSGSLHVFS 250 (337)
Q Consensus 235 ~~las~s~dg~v~iw~ 250 (337)
.+..+..+..+.+.+
T Consensus 167 -~v~ig~~~y~v~~~~ 181 (339)
T 2be1_A 167 -MIVIGKTIFELGIHS 181 (339)
T ss_dssp -EEEEEEEEEECEECC
T ss_pred -eEEEecceEEEEEEC
Confidence 677777777777766
No 312
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=95.20 E-value=1.6 Score=38.96 Aligned_cols=155 Identities=9% Similarity=0.074 Sum_probs=85.1
Q ss_pred CceEEEEECCCC--CEEEEEEcCC-------ceeEEEEc---C-----CeEEEEE---CCeEEEEECCCCeeeeeecC--
Q 019672 74 PRRLCLFNTTTG--TALRELNFLT-------SILAVRLN---K-----KRLVIVL---REKTYIYDANTLAILDTIDT-- 131 (337)
Q Consensus 74 d~~v~iwd~~~~--~~~~~~~~~~-------~v~~i~~~---~-----~~~~v~~---d~~i~i~d~~~~~~~~~~~~-- 131 (337)
.-+|.+||++++ +.++++.++. ...++.++ + +..+-.+ ...|.|||+.+++..+....
T Consensus 122 ~pkLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~~~~gLIVydl~~~~swRv~~~~~ 201 (381)
T 3q6k_A 122 RPAIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNFLRGALFIYDHKKQDSWNVTHPTF 201 (381)
T ss_dssp CCEEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEETTTTEEEEEETTTTEEEEEECGGG
T ss_pred CceEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcCCCCcEEEEECCCCcEEEEccCCC
Confidence 458999999999 9999998753 35667766 1 3443333 46899999998876544421
Q ss_pred CCC--------------CceEEEEeeCCC----ccEEEEcCCCCccEEEEEEccC-----Ccc---c----ccC---ceE
Q 019672 132 VPN--------------LKGLCAFSPSLN----ACFLAVPASTTKGSVLVYNVME-----LHS---H----CEA---PLA 178 (337)
Q Consensus 132 ~~~--------------~~~~~~~~~~~~----~~~la~~~~~~dg~v~i~d~~~-----~~~---~----~~~---~i~ 178 (337)
.++ ..++..++.+|+ +..|.+..- .. -++|.+.+ ... + .++ .-.
T Consensus 202 ~pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~pl-ss--~~ly~V~T~~L~~~~~~~~v~~~G~kg~~s~~~ 278 (381)
T 3q6k_A 202 KAERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAG-SA--IKVYSVNTKELKQKGGKLNPELLGNRGKYNDAI 278 (381)
T ss_dssp SCCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEES-SC--SEEEEEEHHHHSSTTCCCCCEEEEECCTTCCEE
T ss_pred ccccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEEC-CC--CcEEEEEHHHhhCcchhhceEEeeecCCCCCcc
Confidence 111 124555555554 445554432 11 23333321 111 0 012 234
Q ss_pred EEEeC-CCCCEEEEEeCCCcEEEEEEcCC-C---ceeEeeccCCcceeEEEEEeecCCC
Q 019672 179 AIVLS-SNGMYIATASEQGTIIRVFLVSE-A---TKSYSFRRGTYPSTIFSLSFGQSMQ 232 (337)
Q Consensus 179 ~~~~s-~dg~~lat~s~dg~~i~vwd~~~-~---~~~~~~~~~~~~~~i~~l~fs~dg~ 232 (337)
.++++ .+|.++++--+... |..|+..+ . +.+..+.+...-.-...+++.++|.
T Consensus 279 ~~~~D~~~G~ly~~~~~~~a-I~~w~~~~~~~~~~n~~~l~~d~~l~~pd~~~i~~~g~ 336 (381)
T 3q6k_A 279 ALAYDPKTKVIFFAEANTKQ-VSCWNTQKMPLRMKNTDVVYTSSRFVFGTDISVDSKGG 336 (381)
T ss_dssp EEEECTTTCEEEEEESSSSE-EEEEETTSCSBCGGGEEEEEECTTCCSEEEEEECTTSC
T ss_pred eEEEeCCCCeEEEEeccCCe-EEEEeCCCCccccCceEEEEECCCccccCeEEECCCCe
Confidence 56775 67877777666665 68999875 1 1122222221111255666666665
No 313
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=95.00 E-value=2.7 Score=40.37 Aligned_cols=221 Identities=9% Similarity=-0.057 Sum_probs=127.4
Q ss_pred EEEEEcCCceEEEeCCCCcEEEEEe---eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC-Cc
Q 019672 21 GFALSTKDGFKIFDSSTGRLCYERA---VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL-TS 96 (337)
Q Consensus 21 ~la~g~~~g~~vw~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~-~~ 96 (337)
+|+.+....++..++++.+...... .....-+++.+..+.+..+.. ..++|..+++........+... ..
T Consensus 8 ~Ll~s~~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~------~~~~I~r~~~~g~~~~~v~~~g~~~ 81 (628)
T 4a0p_A 8 FLLFSRRADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDI------SLKTISRAFMNGSALEHVVEFGLDY 81 (628)
T ss_dssp EEEEEETTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEET------TTTEEEEEETTSCSCEEEECSSCSC
T ss_pred EEEEEeCCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEEC------CCCeEEEEECCCCCcEEEEeCCCCC
Confidence 5555566778888888765332221 123444556555666665554 4788999988755433333222 24
Q ss_pred eeEEEEc--CCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc
Q 019672 97 ILAVRLN--KKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH 172 (337)
Q Consensus 97 v~~i~~~--~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~ 172 (337)
..+++++ .+.++++. .+.|.+.++........+... ...-.+++.+|....|..+.....+.|...++......
T Consensus 82 P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~~~~~l~~~~--l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~ 159 (628)
T 4a0p_A 82 PEGMAVDWLGKNLYWADTGTNRIEVSKLDGQHRQVLVWKD--LDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERT 159 (628)
T ss_dssp CCEEEEETTTTEEEEEETTTTEEEEEETTSTTCEEEECSS--CCCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCE
T ss_pred cceEEEEeCCCEEEEEECCCCEEEEEecCCCcEEEEEeCC--CCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceE
Confidence 5566664 45676765 568999998654221112111 11234555565444555443212567887877543321
Q ss_pred --c--cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEE
Q 019672 173 --C--EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHV 248 (337)
Q Consensus 173 --~--~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~i 248 (337)
. -...+.|+++++++.|..+......|...|+..... ..+... ......|++.. +. .+.+-...+.|..
T Consensus 160 ~l~~~~~~P~GlalD~~~~~LY~aD~~~~~I~~~d~dG~~~-~v~~~~--l~~P~glav~~-~~---ly~tD~~~~~I~~ 232 (628)
T 4a0p_A 160 TLVPNVGRANGLTIDYAKRRLYWTDLDTNLIESSNMLGLNR-EVIADD--LPHPFGLTQYQ-DY---IYWTDWSRRSIER 232 (628)
T ss_dssp EEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEEEC--CSCEEEEEEET-TE---EEEEETTTTEEEE
T ss_pred EEECCCCCcceEEEccccCEEEEEECCCCEEEEEcCCCCce-EEeecc--CCCceEEEEEC-CE---EEEecCCCCEEEE
Confidence 1 156789999998887777766555578888865433 223221 12245778765 44 6666666788998
Q ss_pred EecCCCcc
Q 019672 249 FSPGFAIN 256 (337)
Q Consensus 249 w~l~~~~~ 256 (337)
.|..++++
T Consensus 233 ~dk~tg~~ 240 (628)
T 4a0p_A 233 ANKTSGQN 240 (628)
T ss_dssp EETTTCCS
T ss_pred EECCCCCc
Confidence 88655543
No 314
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=94.82 E-value=1.9 Score=37.76 Aligned_cols=224 Identities=12% Similarity=0.146 Sum_probs=129.7
Q ss_pred EEEcCCCCEEEEEcCCceEEEeCCCCcEEEEEee-CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCC-CCEEEE
Q 019672 13 VSFNQDNSGFALSTKDGFKIFDSSTGRLCYERAV-GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTT-GTALRE 90 (337)
Q Consensus 13 ~~fs~dg~~la~g~~~g~~vw~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~-~~~~~~ 90 (337)
.-.||..+.+|.=....+.|||+++.+.+-.... .++....+. +.+.+++++. ..|.-|++.. ..+.+-
T Consensus 72 AIMnP~~~ViALrag~~LQiFnletK~klks~~~~e~VvfWkWi-s~~~L~lVT~--------taVyHWs~~~~s~P~kv 142 (365)
T 2xzh_A 72 AIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTDDVTFWKWI-SLNTVALVTD--------NAVYHWSMEGESQPVKM 142 (365)
T ss_dssp EEECSSSSEEEEEETTEEEEEETTTTEEEEEEECSSCEEEEEEC-SSSEEEEEES--------SEEEEEESSTTCCCEEE
T ss_pred eeeCCCccEEEEecCCeEEEechHHhhhhcceecCCccEEEEec-CCCeEEEEcC--------CcEEEEcccCCCCCcee
Confidence 3458888888876666689999999987766654 445555554 5678888875 6999999874 345555
Q ss_pred EEcC-----CceeEEEEcCCeE--EEEE--------CCeEEEEECCCCeeeeeecCCCCCceEEEEeeC---CCccEEEE
Q 019672 91 LNFL-----TSILAVRLNKKRL--VIVL--------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPS---LNACFLAV 152 (337)
Q Consensus 91 ~~~~-----~~v~~i~~~~~~~--~v~~--------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~la~ 152 (337)
+.-+ ..|..-..+++.- ++.+ .|.+.+|..+... .+.++.|.. .-..+... .+..++++
T Consensus 143 FdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~-sQ~ieGhaa--~F~~~~~~g~~~~~~lf~f 219 (365)
T 2xzh_A 143 FDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV-SQPIEGHAA--SFAQFKMEGNAEESTLFCF 219 (365)
T ss_dssp EECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE-EEEECCSEE--EEEEECCTTCSSCEEEEEE
T ss_pred eecchhcccceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeecccc-cceeeeeee--eeEEEecCCCCCCceEEEE
Confidence 5433 2555556666542 2211 3678899987653 234443311 11111111 11223343
Q ss_pred cCCC-CccEEEEEEccCC---ccccc--------------CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeec
Q 019672 153 PAST-TKGSVLVYNVMEL---HSHCE--------------APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 153 ~~~~-~dg~v~i~d~~~~---~~~~~--------------~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~ 214 (337)
+... ..+.++|.++... ..... .---++.+|+.-..+..-+.-|- |.++|+++|.+++.-+
T Consensus 220 a~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~DFPVamqvs~kygviyviTK~G~-ihlyDleTgt~i~~nr 298 (365)
T 2xzh_A 220 AVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGY-IHLYDLETGTCIYMNR 298 (365)
T ss_dssp EEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTTCCEEEEEEETTTTEEEEEETTSE-EEEEETTTCCEEEEEE
T ss_pred EEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccCCceEEEEecccCCEEEEEeCCcE-EEEEEcccCcEEEEec
Confidence 3210 1368899988543 11111 22345666766666777777785 7999999999998765
Q ss_pred cCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCC
Q 019672 215 RGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 215 ~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
-. ...|..-+.+.+.. =++.-..+|.|---.++..
T Consensus 299 IS--~d~iF~ta~~~~~~---Gi~~Vnr~GqVl~v~v~~~ 333 (365)
T 2xzh_A 299 IS--GETIFVTAPHEATA---GIIGVNRKGQVLSVCVEEE 333 (365)
T ss_dssp CC--SSCEEEEEEEGGGT---EEEEEETTCEEEEEEECTT
T ss_pred cC--CCceEEecccCCCC---cEEEEcCCCEEEEEEECcc
Confidence 32 33455445443322 2444447777655555543
No 315
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.60 E-value=1.9 Score=36.70 Aligned_cols=221 Identities=14% Similarity=0.118 Sum_probs=106.4
Q ss_pred CCCEEEEEcC-----CceEEEeCCCCcEEEEEee----CCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEE
Q 019672 18 DNSGFALSTK-----DGFKIFDSSTGRLCYERAV----GAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTAL 88 (337)
Q Consensus 18 dg~~la~g~~-----~g~~vw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~ 88 (337)
++..++.|+. +.+.+||+.+.+-...... .....+ .. .+.+.+++|.. ....-+.+.+||..+++..
T Consensus 15 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~-~~~lyv~GG~~-~~~~~~~~~~~d~~~~~W~ 90 (302)
T 2xn4_A 15 PKLMVVVGGQAPKAIRSVECYDFKEERWHQVAELPSRRCRAGMV--YM-AGLVFAVGGFN-GSLRVRTVDSYDPVKDQWT 90 (302)
T ss_dssp CEEEEEECCBSSSBCCCEEEEETTTTEEEEECCCSSCCBSCEEE--EE-TTEEEEESCBC-SSSBCCCEEEEETTTTEEE
T ss_pred CCEEEEECCCCCCCCCcEEEEcCcCCcEeEcccCCcccccceEE--EE-CCEEEEEeCcC-CCccccceEEECCCCCcee
Confidence 4455666653 2357888877642211111 111211 12 44555555421 1112367899999887654
Q ss_pred EEEEcCC--ceeEEEEcCCeEEEEE--C-----CeEEEEECCCCeeeeeecCCCCCc-eEEEEeeCCCccEEEEcCCCC-
Q 019672 89 RELNFLT--SILAVRLNKKRLVIVL--R-----EKTYIYDANTLAILDTIDTVPNLK-GLCAFSPSLNACFLAVPASTT- 157 (337)
Q Consensus 89 ~~~~~~~--~v~~i~~~~~~~~v~~--d-----~~i~i~d~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~la~~~~~~- 157 (337)
..-..+. .-.++....+.+++.+ + +.+.+||+.+.+-.. +...+.+. ...+... ++.+++.+|...
T Consensus 91 ~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~ 167 (302)
T 2xn4_A 91 SVANMRDRRSTLGAAVLNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH-VAPMNTRRSSVGVGVV--GGLLYAVGGYDVA 167 (302)
T ss_dssp EECCCSSCCBSCEEEEETTEEEEEEEECSSCEEEEEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTEEEEECCEETT
T ss_pred eCCCCCccccceEEEEECCEEEEEcCCCCCccCceEEEEeCCCCeEee-cCCCCCcccCceEEEE--CCEEEEEeCCCCC
Confidence 3322222 1122223345555544 2 368899988764322 21111111 1122222 345666666311
Q ss_pred ----ccEEEEEEccCCcccc--c-----CceEEEEeCCCCCEEEEEeCCCc----EEEEEEcCCCceeE--eeccCCcce
Q 019672 158 ----KGSVLVYNVMELHSHC--E-----APLAAIVLSSNGMYIATASEQGT----IIRVFLVSEATKSY--SFRRGTYPS 220 (337)
Q Consensus 158 ----dg~v~i~d~~~~~~~~--~-----~~i~~~~~s~dg~~lat~s~dg~----~i~vwd~~~~~~~~--~~~~~~~~~ 220 (337)
...+.+||+.+.+-.. . ....++.+ +++.++.|+.++. .+.+||..+.+-.. .+... +.
T Consensus 168 ~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~~~~--r~ 243 (302)
T 2xn4_A 168 SRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTTNAWRQVADMNMC--RR 243 (302)
T ss_dssp TTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTTTEEEEECCCSSC--CB
T ss_pred CCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCCCCEeeCCCCCCc--cc
Confidence 2458889987654211 1 22233333 5677788775431 25789988765321 12111 11
Q ss_pred eEEEEEeecCCCcccEEEEEeCCC-----cEEEEecCCC
Q 019672 221 TIFSLSFGQSMQFQDILVATSSSG-----SLHVFSPGFA 254 (337)
Q Consensus 221 ~i~~l~fs~dg~~~~~las~s~dg-----~v~iw~l~~~ 254 (337)
. .+++. .+++ +++.|+.++ .|.+||+++.
T Consensus 244 ~-~~~~~-~~~~---i~v~GG~~~~~~~~~v~~yd~~~~ 277 (302)
T 2xn4_A 244 N-AGVCA-VNGL---LYVVGGDDGSCNLASVEYYNPTTD 277 (302)
T ss_dssp S-CEEEE-ETTE---EEEECCBCSSSBCCCEEEEETTTT
T ss_pred c-CeEEE-ECCE---EEEECCcCCCcccccEEEEcCCCC
Confidence 1 11222 2666 777777653 4888887643
No 316
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=94.45 E-value=3.6 Score=39.36 Aligned_cols=221 Identities=8% Similarity=0.002 Sum_probs=115.5
Q ss_pred EEEEEcCCceEEEeCCCCc--EEEE-EeeCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE-EEEEEcC-C
Q 019672 21 GFALSTKDGFKIFDSSTGR--LCYE-RAVGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA-LRELNFL-T 95 (337)
Q Consensus 21 ~la~g~~~g~~vw~~~~~~--~~~~-~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~-~~~~~~~-~ 95 (337)
+|.-+..+.+++.+++... .... ........+++.+..+.+..+.. ..++|..+++..... ...+... .
T Consensus 11 ~~~~~~~~~I~~i~~~~~~~~~~~~~~~~~~~~~ld~~~~~~~ly~sD~------~~~~I~r~~~~g~~~~~~v~~~~~~ 84 (619)
T 3s94_A 11 LLLYANRRDLRLVDATNGKENATIVVGGLEDAAAVDFVFSHGLIYWSDV------SEEAIKRTEFNKTESVQNVVVSGLL 84 (619)
T ss_dssp CEEEECSSBEEEECCC---------CBCCSCEEEEEEETTTTEEEEEET------TTTEEEEEEC-----CEEEECSSCS
T ss_pred eEEEeccccEEEEeCCCCcceEEEEEcCCCceEEEEEEeCCCEEEEEEC------CCCeEEEEEccCCCceEEEEeCCCC
Confidence 3444555667788877543 1111 12234444566666666665554 367888888875532 1222222 3
Q ss_pred ceeEEEEcC--CeEEEEE--CCeEEEEECCCCeeeeee-cCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCc
Q 019672 96 SILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTI-DTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELH 170 (337)
Q Consensus 96 ~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~ 170 (337)
...+++++. +.++++. .+.|.+.++........+ .....|.+ ++.+|.+..|..+.....+.|...++....
T Consensus 85 ~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG~~~~~l~~~~l~~P~~---Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~ 161 (619)
T 3s94_A 85 SPDGLACDWLGEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRA---IALDPSSGFMYWTDWGEVPKIERAGMDGSS 161 (619)
T ss_dssp CEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCC---EEEETTTTEEEEEECSSSCEEEEEETTSCS
T ss_pred CcCeEEEEecCCEEEEEeCCCCEEEEEECCCCCEEEEEeCCCCCCce---EEEecCCCeEEEeccCCCCEEEEEECCCCc
Confidence 567788764 5566665 578999998654322122 11223333 344454334444432124677777765322
Q ss_pred c--cc---cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCc
Q 019672 171 S--HC---EAPLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGS 245 (337)
Q Consensus 171 ~--~~---~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~ 245 (337)
. +. -...+.|++++++..|..+......|...|+..... ..+..+.. .....|++..+ . .+.+-...+.
T Consensus 162 ~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~~-~~~~~~~~-~~P~gi~~~~~-~---ly~td~~~~~ 235 (619)
T 3s94_A 162 RFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGSL-PHPFALTLFED-I---LYWTDWSTHS 235 (619)
T ss_dssp CEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCEE-C----------CCCEEESSS-E---EEEECTTTCS
T ss_pred eEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCcc-EEEEeCCC-CCceEEEEeCC-E---EEEecCCCCE
Confidence 1 11 156789999998777766655444467888754332 22322111 11245677655 4 6666667788
Q ss_pred EEEEecCCCcc
Q 019672 246 LHVFSPGFAIN 256 (337)
Q Consensus 246 v~iw~l~~~~~ 256 (337)
|...|..+++.
T Consensus 236 V~~~d~~tg~~ 246 (619)
T 3s94_A 236 ILACNKYTGEG 246 (619)
T ss_dssp EEEEESSSCCC
T ss_pred EEEEECCCCcc
Confidence 99988766543
No 317
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.18 E-value=2.3 Score=36.14 Aligned_cols=221 Identities=12% Similarity=0.087 Sum_probs=107.4
Q ss_pred CCEEEEEcC---CceEEEeCCCCcEEEEEe--eCCEEEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEc
Q 019672 19 NSGFALSTK---DGFKIFDSSTGRLCYERA--VGAFSIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNF 93 (337)
Q Consensus 19 g~~la~g~~---~g~~vw~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~ 93 (337)
+..++.|+. +.+.+||..+.+-..... ........... .+.+.+++|.. ...-+.+.++|+.+++....-..
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~-~~~lyv~GG~~--~~~~~~~~~~d~~~~~W~~~~~~ 88 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFW-DNVVYILGGSQ--LFPIKRMDCYNVVKDSWYSKLGP 88 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEEEECCCCSCCCBSCEEEEE-TTEEEEECCBS--SSBCCEEEEEETTTTEEEEEECC
T ss_pred ceEEEEeCCCCCceEEEecCCCCCEecCCCCCcccceeEEEEE-CCEEEEEeCCC--CCCcceEEEEeCCCCeEEECCCC
Confidence 345566664 346888987764221111 00011111122 34455555422 12347899999998865443333
Q ss_pred CCc--eeEEEEcCCeEEEEE--C------CeEEEEECCCCeeeeeecCCCCC-ceEEEEeeCCCccEEEEcCCCC-----
Q 019672 94 LTS--ILAVRLNKKRLVIVL--R------EKTYIYDANTLAILDTIDTVPNL-KGLCAFSPSLNACFLAVPASTT----- 157 (337)
Q Consensus 94 ~~~--v~~i~~~~~~~~v~~--d------~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~----- 157 (337)
+.+ -.++....+.+++.+ + +.+.+||+.+.+-.. +...+.+ ....+... ++.+++++|...
T Consensus 89 p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~ 165 (306)
T 3ii7_A 89 PTPRDSLAACAAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT-KPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNVSG 165 (306)
T ss_dssp SSCCBSCEEEEETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE-ECCCSSCCBSCEEEEE--TTEEEEECCEESCTTTC
T ss_pred CccccceeEEEECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe-CCCCcCCcceeEEEEE--CCEEEEECCCCCCCCcc
Confidence 221 122223355666554 2 368999998764322 2111111 11122222 345666666311
Q ss_pred --ccEEEEEEccCCccc--cc-----CceEEEEeCCCCCEEEEEeCCCc----EEEEEEcCCCcee--EeeccCCcceeE
Q 019672 158 --KGSVLVYNVMELHSH--CE-----APLAAIVLSSNGMYIATASEQGT----IIRVFLVSEATKS--YSFRRGTYPSTI 222 (337)
Q Consensus 158 --dg~v~i~d~~~~~~~--~~-----~~i~~~~~s~dg~~lat~s~dg~----~i~vwd~~~~~~~--~~~~~~~~~~~i 222 (337)
...+.+||+.+.+-. .. ..-.++.+ +++.++.|+.++. .+.+||..+.+-. ..+... ....
T Consensus 166 ~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~~ 241 (306)
T 3ii7_A 166 RVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKLNEWKMVSPMPWK--GVTV 241 (306)
T ss_dssp EECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTTTEEEECCCCSCC--BSCC
T ss_pred cccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCCCcEEECCCCCCC--ccce
Confidence 345889998765421 11 11223333 6677777764331 1468998876532 111111 1111
Q ss_pred EEEEeecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019672 223 FSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 254 (337)
Q Consensus 223 ~~l~fs~dg~~~~~las~s~d-----g~v~iw~l~~~ 254 (337)
.++.+ +++ +++.|+.+ ..+.+||+++.
T Consensus 242 ~~~~~--~~~---i~v~GG~~~~~~~~~~~~yd~~~~ 273 (306)
T 3ii7_A 242 KCAAV--GSI---VYVLAGFQGVGRLGHILEYNTETD 273 (306)
T ss_dssp EEEEE--TTE---EEEEECBCSSSBCCEEEEEETTTT
T ss_pred eEEEE--CCE---EEEEeCcCCCeeeeeEEEEcCCCC
Confidence 22222 666 78888754 46788887653
No 318
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=93.98 E-value=2.6 Score=36.04 Aligned_cols=180 Identities=13% Similarity=0.171 Sum_probs=87.6
Q ss_pred EEEEcCCceEEEeCCCCcEEEEE-ee--CCEEEEEEccCCCEEEEEeCC-----CCCCCCCceEEEEECCCCCEEEEEEc
Q 019672 22 FALSTKDGFKIFDSSTGRLCYER-AV--GAFSIVEMLYSSSLLAIVGAG-----EQPSLSPRRLCLFNTTTGTALRELNF 93 (337)
Q Consensus 22 la~g~~~g~~vw~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~g-----~~~~~~d~~v~iwd~~~~~~~~~~~~ 93 (337)
++.|+ +.+.+||..+.+=.... .. .............++ +++|- .......+.+..||..+++....-..
T Consensus 8 ~~~GG-~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iy-v~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~ 85 (315)
T 4asc_A 8 FMISE-EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVF-VAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLGMPPL 85 (315)
T ss_dssp EEEET-TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEE-EEEEEEECSSCSSSCEEEEEEEEETTTTEEEECCCB
T ss_pred EEEcC-CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEE-EEcCcccCCCCCccccccceEEecCCCCeEEECCCC
Confidence 44555 56789998877632211 10 112233334444444 44441 11011123488899988765332222
Q ss_pred CCce--eEEEEcCCeEEEEEC----------CeEEEEECCCCeeeeeecCCCCC-ceEEEEeeCCCccEEEEcCCCC---
Q 019672 94 LTSI--LAVRLNKKRLVIVLR----------EKTYIYDANTLAILDTIDTVPNL-KGLCAFSPSLNACFLAVPASTT--- 157 (337)
Q Consensus 94 ~~~v--~~i~~~~~~~~v~~d----------~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~--- 157 (337)
+.+- .++....+.+++.+. +.+.+||+.+.+-. .+...+.+ ....+... ++.+++.+|...
T Consensus 86 p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 162 (315)
T 4asc_A 86 PSPRCLFGLGEALNSIYVVGGREIKDGERCLDSVMCYDRLSFKWG-ESDPLPYVVYGHTVLSH--MDLVYVIGGKGSDRK 162 (315)
T ss_dssp SSCEESCEEEEETTEEEEECCEESSTTCCBCCCEEEEETTTTEEE-ECCCCSSCCBSCEEEEE--TTEEEEECCBCTTSC
T ss_pred CcchhceeEEEECCEEEEEeCCcCCCCCcccceEEEECCCCCcEe-ECCCCCCcccceeEEEE--CCEEEEEeCCCCCCc
Confidence 2211 122333556655542 35889999876422 22111111 12222222 345666666311
Q ss_pred -ccEEEEEEccCCccc--cc-----CceEEEEeCCCCCEEEEEeCCCc----EEEEEEcCCCc
Q 019672 158 -KGSVLVYNVMELHSH--CE-----APLAAIVLSSNGMYIATASEQGT----IIRVFLVSEAT 208 (337)
Q Consensus 158 -dg~v~i~d~~~~~~~--~~-----~~i~~~~~s~dg~~lat~s~dg~----~i~vwd~~~~~ 208 (337)
-..+.+||+.+.+-. .. ..-.++.+ +++.++.|+.++. .+.+||..+.+
T Consensus 163 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 223 (315)
T 4asc_A 163 CLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDNK 223 (315)
T ss_dssp BCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTTE
T ss_pred ccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCCe
Confidence 246889998765421 11 11223333 6677787776542 25688988764
No 319
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=93.92 E-value=2.5 Score=44.33 Aligned_cols=222 Identities=12% Similarity=0.154 Sum_probs=115.5
Q ss_pred CceEEEEECCCCCEEEEEEcCCceeEEEEcCCeEEEEE--CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEE
Q 019672 74 PRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL--REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLA 151 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~--d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la 151 (337)
..+|.|-|+..+..+.+-.... -+.-.+|...+++. ..++.|||+.+.+.+..+.... .++-+.+-.+. .|+
T Consensus 47 ~~~vvIidl~~~~~~~rrpi~A--dsAIMnP~~~iiALrag~~lQiFnl~~k~klks~~~~e---~VvfWkWis~~-~l~ 120 (1630)
T 1xi4_A 47 QAQVVIIDMNDPSNPIRRPISA--DSAIMNPASKVIALKAGKTLQIFNIEMKSKMKAHTMTD---DVTFWKWISLN-TVA 120 (1630)
T ss_pred CceEEEEECCCCCCcccccccc--hhhccCCCcceEEEecCCeEEEeehHHhhhhcccccCC---CceEEEecCCC-eeE
Confidence 4589999998766543221111 11123666656655 6799999998887776665432 46666664333 344
Q ss_pred EcCCCCccEEEEEEccCCccc------c----cCceEEEEeCCCCCEEEEEe-------CCCcEEEEEEcCCCceeEeec
Q 019672 152 VPASTTKGSVLVYNVMELHSH------C----EAPLAAIVLSSNGMYIATAS-------EQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 152 ~~~~~~dg~v~i~d~~~~~~~------~----~~~i~~~~~s~dg~~lat~s-------~dg~~i~vwd~~~~~~~~~~~ 214 (337)
... +..|.-|++...... | ...|..-..+++.++++..+ -.|. +.+|..+.+.. +.+
T Consensus 121 lVT---~~aVyHW~~~~~s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~G~-mQLyS~er~~s-Q~i- 194 (1630)
T 1xi4_A 121 LVT---DNAVYHWSMEGESQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVVGA-MQLYSVDRKVS-QPI- 194 (1630)
T ss_pred EEc---CCeEEEeccCCCCccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCcccce-eeeeecccccc-hhh-
Confidence 332 467999999642211 1 15677888899999887543 2354 57888765432 111
Q ss_pred cCCcceeEEEEEe---ecCCCcccEEEEEeC---CCcEEEEecCCCcccCCCCcccccccccccccceeecccccceeee
Q 019672 215 RGTYPSTIFSLSF---GQSMQFQDILVATSS---SGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVLR 288 (337)
Q Consensus 215 ~~~~~~~i~~l~f---s~dg~~~~~las~s~---dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~ 288 (337)
.|| -+.-..+.. .+..+ .++-+.. -+.+||-++.++....++......--.+.|+.. ..++
T Consensus 195 egh-a~~F~~~~~~~~~~~~~---l~~f~~~~~~g~kLhi~Ei~~~~~~~~~f~kk~~~~~~~~~~~------~Dfp--- 261 (1630)
T 1xi4_A 195 EGH-AASFAQFKMEGNAEEST---LFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQ------NDFP--- 261 (1630)
T ss_pred hHh-HhhhheeccCCCCCCce---EEEEEEecCCCceEEEEecCCCccCCCCCccccccccCCcccc------cCcc---
Confidence 111 111001111 01111 2222211 168999999765211110000000001111110 0111
Q ss_pred eccCCCcccCEEEEEEeCCcEEEEEEecCCCC
Q 019672 289 NAFPAGVKRASVSVITYNGYFVEYIFSINNCC 320 (337)
Q Consensus 289 ~~~~~~~~~~~l~~~~~dg~~~~~~~~~~~~~ 320 (337)
.++..+++-.-++..+.-|.++.|++.+-.+-
T Consensus 262 v~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 262 VAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred eEEEeccccCEEEEEecCceEEEEecccchhh
Confidence 11122444577899999999999999776553
No 320
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.79 E-value=4 Score=37.41 Aligned_cols=99 Identities=8% Similarity=0.096 Sum_probs=52.4
Q ss_pred ceeEEEEcCCe-EEEEE-C-CeEEEEECCCCee--eeeecCC----CCCceEEEEeeCCC---ccEEEEcCCC-------
Q 019672 96 SILAVRLNKKR-LVIVL-R-EKTYIYDANTLAI--LDTIDTV----PNLKGLCAFSPSLN---ACFLAVPAST------- 156 (337)
Q Consensus 96 ~v~~i~~~~~~-~~v~~-d-~~i~i~d~~~~~~--~~~~~~~----~~~~~~~~~~~~~~---~~~la~~~~~------- 156 (337)
...++++.+++ ++++. . +.|++++..+++. +..+... ....++..++++|+ +..|.++...
T Consensus 28 ~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 28 KPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp SEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred CceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 45678887765 44444 3 3688887654433 2222211 12456777777774 3333322210
Q ss_pred C----ccEEEEEEccCC-------cccc-------cCceEEEEeCCCCCEEEEEeC
Q 019672 157 T----KGSVLVYNVMEL-------HSHC-------EAPLAAIVLSSNGMYIATASE 194 (337)
Q Consensus 157 ~----dg~v~i~d~~~~-------~~~~-------~~~i~~~~~s~dg~~lat~s~ 194 (337)
. ...|.-+++... +.+. .+....|+|+|||++.++.++
T Consensus 108 ~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~H~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 108 KELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPSSKDHQSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECCCSSCCEEEEEECTTSCEEEEECC
T ss_pred cccccccEEEEEEECCCCCCcCCcEEEEEcCCCCCCCCCCeEeECCCCeEEEEECC
Confidence 0 134555554321 1111 145789999999998777553
No 321
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=93.28 E-value=3.5 Score=35.17 Aligned_cols=226 Identities=13% Similarity=0.101 Sum_probs=107.8
Q ss_pred EEcCCCCEEEEEcC-----CceEEEeCCCCcEEEEEee----CCEEEEEEccCCCEEEEEeCCC---CCCCCCceEEEEE
Q 019672 14 SFNQDNSGFALSTK-----DGFKIFDSSTGRLCYERAV----GAFSIVEMLYSSSLLAIVGAGE---QPSLSPRRLCLFN 81 (337)
Q Consensus 14 ~fs~dg~~la~g~~-----~g~~vw~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~g~---~~~~~d~~v~iwd 81 (337)
+..-++..++.|+. +.+.+||..+.+-...... .....+ .. .+.+.+++|.. ......+.+.++|
T Consensus 20 ~~~~~~~i~v~GG~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~--~~-~~~lyv~GG~~~~~~~~~~~~~~~~~d 96 (308)
T 1zgk_A 20 APKVGRLIYTAGGYFRQSLSYLEAYNPSNGTWLRLADLQVPRSGLAGC--VV-GGLLYAVGGRNNSPDGNTDSSALDCYN 96 (308)
T ss_dssp -CCCCCCEEEECCBSSSBCCCEEEEETTTTEEEECCCCSSCCBSCEEE--EE-TTEEEEECCEEEETTEEEECCCEEEEE
T ss_pred ccCCCCEEEEEeCcCCCCcceEEEEcCCCCeEeECCCCCcccccceEE--EE-CCEEEEECCCcCCCCCCeecceEEEEC
Confidence 33446677777763 2357888877642211110 111111 12 34555555420 1111235788999
Q ss_pred CCCCCEEEEEEcCC--ceeEEEEcCCeEEEEE-------CCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEE
Q 019672 82 TTTGTALRELNFLT--SILAVRLNKKRLVIVL-------REKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAV 152 (337)
Q Consensus 82 ~~~~~~~~~~~~~~--~v~~i~~~~~~~~v~~-------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~ 152 (337)
+.+++....-..+. .-.++....+.+++.+ -+.+.+||+.+.+-...-..+.......+... ++.++++
T Consensus 97 ~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~ 174 (308)
T 1zgk_A 97 PMTNQWSPCAPMSVPRNRIGVGVIDGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAV 174 (308)
T ss_dssp TTTTEEEECCCCSSCCBTCEEEEETTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEE
T ss_pred CCCCeEeECCCCCcCccccEEEEECCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEE
Confidence 98876433222221 1112222355565553 24688999987643221111111111222222 3556667
Q ss_pred cCCCC---ccEEEEEEccCCcccc-------cCceEEEEeCCCCCEEEEEeCCC----cEEEEEEcCCCceeE--eeccC
Q 019672 153 PASTT---KGSVLVYNVMELHSHC-------EAPLAAIVLSSNGMYIATASEQG----TIIRVFLVSEATKSY--SFRRG 216 (337)
Q Consensus 153 ~~~~~---dg~v~i~d~~~~~~~~-------~~~i~~~~~s~dg~~lat~s~dg----~~i~vwd~~~~~~~~--~~~~~ 216 (337)
+|... ...+.+||+.+.+-.. ...-.++.+ +++.++.|+.++ ..+.+||+.+.+-.. .+...
T Consensus 175 GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~~~W~~~~~~p~~ 252 (308)
T 1zgk_A 175 GGFDGTNRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVETETWTFVAPMKHR 252 (308)
T ss_dssp CCBCSSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTTEEEECCCCSSC
T ss_pred eCCCCCCcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCCCcEEECCCCCCC
Confidence 66321 2458889987654211 122233333 667777776542 125789988765321 11111
Q ss_pred CcceeEEEEEeecCCCcccEEEEEeCC-----CcEEEEecCC
Q 019672 217 TYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGF 253 (337)
Q Consensus 217 ~~~~~i~~l~fs~dg~~~~~las~s~d-----g~v~iw~l~~ 253 (337)
... .+++. -+++ +++.|+.+ ..+.+||+++
T Consensus 253 --r~~-~~~~~-~~~~---i~v~GG~~~~~~~~~v~~yd~~~ 287 (308)
T 1zgk_A 253 --RSA-LGITV-HQGR---IYVLGGYDGHTFLDSVECYDPDT 287 (308)
T ss_dssp --CBS-CEEEE-ETTE---EEEECCBCSSCBCCEEEEEETTT
T ss_pred --ccc-eEEEE-ECCE---EEEEcCcCCCcccceEEEEcCCC
Confidence 111 12222 2566 77777644 3577888754
No 322
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=93.10 E-value=2.5 Score=42.78 Aligned_cols=77 Identities=19% Similarity=0.213 Sum_probs=48.0
Q ss_pred CceEEEEeCCCCCEEEEEeCCCcEEEE-EEcCCCce-------------eEee-c------cCCcceeEEEEEeecCCCc
Q 019672 175 APLAAIVLSSNGMYIATASEQGTIIRV-FLVSEATK-------------SYSF-R------RGTYPSTIFSLSFGQSMQF 233 (337)
Q Consensus 175 ~~i~~~~~s~dg~~lat~s~dg~~i~v-wd~~~~~~-------------~~~~-~------~~~~~~~i~~l~fs~dg~~ 233 (337)
.|..-.+.+|+ .++.+-.||.++|+ ++-..+.. +..+ . .+.....+.+++..++..
T Consensus 172 ~p~~l~av~~~--~l~Vsl~dGgLlrl~r~~~~~~~~~~~f~~~s~~~sl~~l~~~~~~~~~~~~~~~~~~~~~~~~~~- 248 (950)
T 4gq2_M 172 KPDLMAAISTS--EICVSFFNGGLTKIILNPKDASHYEQHIDDSSYLFSLKKYLSLQAFKADYRSPNTIISMIFLSTYN- 248 (950)
T ss_dssp CEEEEEECSSS--EEEEEETTSCEEEEEEETTTTEEEEEEECCCCCCCBCC-------CCSSCCCTTCEEEEEEETTTT-
T ss_pred CceEEEEEcCC--eEEEEECCCCEEEEEecCCCCCcceeeecCCcHHHhhhhhcccccCCCCCCCcceEEEEeecCCCc-
Confidence 45555566654 56667778877776 44333321 1000 0 011122477888888888
Q ss_pred ccEEEEEeCCCcEEEEecCCCcc
Q 019672 234 QDILVATSSSGSLHVFSPGFAIN 256 (337)
Q Consensus 234 ~~~las~s~dg~v~iw~l~~~~~ 256 (337)
++.+-+.|+++|||++.++.-
T Consensus 249 --~lftl~~D~~LRiWsl~t~~~ 269 (950)
T 4gq2_M 249 --VLVMLSLDYKLKVLDLSTNQC 269 (950)
T ss_dssp --EEEEEETTCEEEEEETTTTEE
T ss_pred --EEEEEECCCEEEEEECCCCCe
Confidence 999999999999999988653
No 323
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=92.37 E-value=8 Score=37.03 Aligned_cols=170 Identities=8% Similarity=-0.028 Sum_probs=99.1
Q ss_pred CceEEEEECCCCCEEEEEEcC--CceeEEEEcC--CeEEEEE--CCeEEEEECCCCeeeeeecCC-CCCceEEEEeeCCC
Q 019672 74 PRRLCLFNTTTGTALRELNFL--TSILAVRLNK--KRLVIVL--REKTYIYDANTLAILDTIDTV-PNLKGLCAFSPSLN 146 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~--~~v~~i~~~~--~~~~v~~--d~~i~i~d~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 146 (337)
.+.|+.-|+.+......+... ..+.+|++++ +.++++. .+.|+.+++........+... ..+.+ +++.+ .
T Consensus 14 ~~~I~~i~l~~~~~~~~~~~~~~~~~~~l~~d~~~~~lywtD~~~~~I~r~~~~g~~~~~v~~~g~~~P~G-lAvD~--~ 90 (628)
T 4a0p_A 14 RADIRRISLETNNNNVAIPLTGVKEASALDFDVTDNRIYWTDISLKTISRAFMNGSALEHVVEFGLDYPEG-MAVDW--L 90 (628)
T ss_dssp TTEEEEEESSCTTCEEECCCCSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCE-EEEET--T
T ss_pred CCcEEEEECCCCCcceEEEcCCCCceEEEEEECCCCEEEEEECCCCeEEEEECCCCCcEEEEeCCCCCcce-EEEEe--C
Confidence 368888898876544444333 3677888875 5566665 678999988654333333322 22333 34443 3
Q ss_pred ccEEEEcCCCCccEEEEEEccCCcc--cc-c--CceEEEEeCCCCCEEEEEe-C-CCcEEEEEEcCCCceeEeeccCCcc
Q 019672 147 ACFLAVPASTTKGSVLVYNVMELHS--HC-E--APLAAIVLSSNGMYIATAS-E-QGTIIRVFLVSEATKSYSFRRGTYP 219 (337)
Q Consensus 147 ~~~la~~~~~~dg~v~i~d~~~~~~--~~-~--~~i~~~~~s~dg~~lat~s-~-dg~~i~vwd~~~~~~~~~~~~~~~~ 219 (337)
+..|..+.. ..+.|.+.++..... +. . .....|+++|...+|.-+. . .+. |...++..... ..+-.+ -
T Consensus 91 ~~~LY~tD~-~~~~I~v~~~dG~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~-I~r~~~dG~~~-~~l~~~--~ 165 (628)
T 4a0p_A 91 GKNLYWADT-GTNRIEVSKLDGQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPK-IDRAAMDGSER-TTLVPN--V 165 (628)
T ss_dssp TTEEEEEET-TTTEEEEEETTSTTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCE-EEEEETTSCSC-EEEECS--C
T ss_pred CCEEEEEEC-CCCEEEEEecCCCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCE-EEEEeCCCCce-EEEECC--C
Confidence 333433333 468899999864322 11 1 5578999998544444433 2 344 56677654332 222222 2
Q ss_pred eeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 220 STIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 220 ~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
.....|+++++++ .++.+-+..+.|..++++.
T Consensus 166 ~~P~GlalD~~~~--~LY~aD~~~~~I~~~d~dG 197 (628)
T 4a0p_A 166 GRANGLTIDYAKR--RLYWTDLDTNLIESSNMLG 197 (628)
T ss_dssp SSEEEEEEETTTT--EEEEEETTTTEEEEEETTS
T ss_pred CCcceEEEccccC--EEEEEECCCCEEEEEcCCC
Confidence 2367899999766 1455556667899999865
No 324
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=92.24 E-value=2.6 Score=34.61 Aligned_cols=142 Identities=13% Similarity=0.058 Sum_probs=79.3
Q ss_pred ceeEEEEcCCeEEEE-ECCeEEEEECCCCeee------eeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccC
Q 019672 96 SILAVRLNKKRLVIV-LREKTYIYDANTLAIL------DTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVME 168 (337)
Q Consensus 96 ~v~~i~~~~~~~~v~-~d~~i~i~d~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~ 168 (337)
.+.+++|+|+..+-+ .++.++-.+..+.+.. ..+-.. .-..--++.+++++.+.++ . ||.|.-++-.+
T Consensus 42 ~~~~laf~P~G~LYaV~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-Gw~~F~a~~fD~~G~LYav-~---dG~iyr~~pP~ 116 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGVLNDKIYKGTPPTHDNDNWMGRAKKIGNG-GWNQFQFLFFDPNGYLYAV-S---KDKLYKASPPQ 116 (236)
T ss_dssp TCSEEEECTTSCEEEEETTEEEEESCCCSTTCCHHHHCEEEECS-CGGGCSEEEECTTSCEEEE-E---TTEEEEESCCC
T ss_pred cceeEEECCCccEEEEeCCeEEEECCCCCCcccccccccEeccc-ccccceEEEECCCCCEEEe-C---CCEEEEeCCCc
Confidence 677899998765443 5777666665442111 111000 0011146677788888777 3 68887776533
Q ss_pred Ccc---------ccc---CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCc------eeEeec-cCCcceeEEEEEeec
Q 019672 169 LHS---------HCE---APLAAIVLSSNGMYIATASEQGTIIRVFLVSEAT------KSYSFR-RGTYPSTIFSLSFGQ 229 (337)
Q Consensus 169 ~~~---------~~~---~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~------~~~~~~-~~~~~~~i~~l~fs~ 229 (337)
... +.. ..+..|.|.|+|.+-|.. ||.+.| +.-.++. ....+. .+-+ .-.-+.|+|
T Consensus 117 ~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr-~~~P~~~~~~wl~~~~~~g~~g~~--~yr~l~f~~ 191 (236)
T 1tl2_A 117 SDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYK-ALPPVSNQDNWLARATKIGQGGWD--TFKFLFFSS 191 (236)
T ss_dssp STTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEE-ECCCSSTTCCHHHHCEEEESSSGG--GEEEEEECT
T ss_pred CCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEe-cCCCCCCCcccccccceeccCCcc--eEEEEEECC
Confidence 211 111 578999999999987776 776322 2222111 011111 1212 234467999
Q ss_pred CCCcccEEEEEeCCCcEEEEecCCC
Q 019672 230 SMQFQDILVATSSSGSLHVFSPGFA 254 (337)
Q Consensus 230 dg~~~~~las~s~dg~v~iw~l~~~ 254 (337)
+|. +.++. +| +||....+
T Consensus 192 ~G~---l~~v~--~g--~~Y~~~~p 209 (236)
T 1tl2_A 192 VGT---LFGVQ--GG--KFYEDYPP 209 (236)
T ss_dssp TSC---EEEEE--TT--EEEEESCC
T ss_pred CCc---EEEEe--CC--eEEecCCc
Confidence 998 66655 66 66765444
No 325
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=91.14 E-value=11 Score=36.46 Aligned_cols=190 Identities=8% Similarity=0.028 Sum_probs=92.6
Q ss_pred CCCCEEEEEcCC-----ceEEEeCCCCcEEEEE-e-------eCCEEEEEEccC-CCEEEEEeCCCCCCCCCceEEEEEC
Q 019672 17 QDNSGFALSTKD-----GFKIFDSSTGRLCYER-A-------VGAFSIVEMLYS-SSLLAIVGAGEQPSLSPRRLCLFNT 82 (337)
Q Consensus 17 ~dg~~la~g~~~-----g~~vw~~~~~~~~~~~-~-------~~~~~~~~~~~~-~~~~~~~~~g~~~~~~d~~v~iwd~ 82 (337)
-++..++.|+.+ .+.+||..+++-.... . ..-..+...... .+.+.++||...+...-+.+.+||.
T Consensus 396 ~~~~iyv~GG~~~~~~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~ 475 (695)
T 2zwa_A 396 AGNDVFYMGGSNPYRVNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDM 475 (695)
T ss_dssp CSSCEEEECCBSSSBCCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEET
T ss_pred ECCEEEEECCCCCCCcCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeC
Confidence 456677777642 3567887766422111 1 011112222232 4445555543221112356899999
Q ss_pred CCCCEEEEEEcCC---ceeEEEEcCCeEEEEE----CCeEEEEECCCCeeeeeecC----CCCCceEEEEeeCCC-ccEE
Q 019672 83 TTGTALRELNFLT---SILAVRLNKKRLVIVL----REKTYIYDANTLAILDTIDT----VPNLKGLCAFSPSLN-ACFL 150 (337)
Q Consensus 83 ~~~~~~~~~~~~~---~v~~i~~~~~~~~v~~----d~~i~i~d~~~~~~~~~~~~----~~~~~~~~~~~~~~~-~~~l 150 (337)
.+++....-..+. ....+.+..+.+++.+ .+.+.+||+.+.+-. .+.. +....+..++..+.+ +.++
T Consensus 476 ~t~~W~~~~~~p~~R~~h~~~~~~~~~iyv~GG~~~~~~v~~yd~~t~~W~-~~~~~g~~p~~r~~~~a~v~~~~~~~iy 554 (695)
T 2zwa_A 476 KTREWSMIKSLSHTRFRHSACSLPDGNVLILGGVTEGPAMLLYNVTEEIFK-DVTPKDEFFQNSLVSAGLEFDPVSKQGI 554 (695)
T ss_dssp TTTEEEECCCCSBCCBSCEEEECTTSCEEEECCBCSSCSEEEEETTTTEEE-ECCCSSGGGGSCCBSCEEEEETTTTEEE
T ss_pred CCCcEEECCCCCCCcccceEEEEcCCEEEEECCCCCCCCEEEEECCCCceE-EccCCCCCCCcccceeEEEEeCCCCEEE
Confidence 8876443222221 1223333355666654 127999999876422 1111 111112222332333 5677
Q ss_pred EEcCCCCc-----cEEEEEEccCCcc--------c----cc--CceEEEEeCCCCCEEEEEeCC--------CcEEEEEE
Q 019672 151 AVPASTTK-----GSVLVYNVMELHS--------H----CE--APLAAIVLSSNGMYIATASEQ--------GTIIRVFL 203 (337)
Q Consensus 151 a~~~~~~d-----g~v~i~d~~~~~~--------~----~~--~~i~~~~~s~dg~~lat~s~d--------g~~i~vwd 203 (337)
+++|...+ ..+.+||+.+..- + .. ....++.+ .+++.++.|+.+ .. +.+||
T Consensus 555 v~GG~~~~~~~~~~~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~-v~~yd 632 (695)
T 2zwa_A 555 ILGGGFMDQTTVSDKAIIFKYDAENATEPITVIKKLQHPLFQRYGSQIKYI-TPRKLLIVGGTSPSGLFDRTNS-IISLD 632 (695)
T ss_dssp EECCBCTTSSCBCCEEEEEEECTTCSSCCEEEEEEEECGGGCCBSCEEEEE-ETTEEEEECCBCSSCCCCTTTS-EEEEE
T ss_pred EECCcCCCCCeeeCcEEEEEccCCccccceEEEEcCCCCCCCcccceEEEe-CCCEEEEECCccCCCCCCCCCe-EEEEE
Confidence 77774222 4688999877651 0 01 11222332 336777777743 23 56889
Q ss_pred cCCCce
Q 019672 204 VSEATK 209 (337)
Q Consensus 204 ~~~~~~ 209 (337)
..+.+-
T Consensus 633 ~~t~~W 638 (695)
T 2zwa_A 633 PLSETL 638 (695)
T ss_dssp TTTTEE
T ss_pred CCCCeE
Confidence 887653
No 326
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=90.91 E-value=7.9 Score=34.04 Aligned_cols=98 Identities=13% Similarity=0.047 Sum_probs=54.5
Q ss_pred CceeEEEEcCCe-EEEEE--CCeEEEEECCCCee--eeeec--CCCCCceEEEEeeCCC---ccEE--EEcCCCCccEEE
Q 019672 95 TSILAVRLNKKR-LVIVL--REKTYIYDANTLAI--LDTID--TVPNLKGLCAFSPSLN---ACFL--AVPASTTKGSVL 162 (337)
Q Consensus 95 ~~v~~i~~~~~~-~~v~~--d~~i~i~d~~~~~~--~~~~~--~~~~~~~~~~~~~~~~---~~~l--a~~~~~~dg~v~ 162 (337)
.....|++.+++ +++.. .++|++++..+++. +..+. ......+...++.+|+ +..| .++.. .++.|.
T Consensus 32 ~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~-~~~~v~ 110 (347)
T 3das_A 32 NSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSA-SDNRIV 110 (347)
T ss_dssp SSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECS-SSEEEE
T ss_pred CCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecC-CCCEEE
Confidence 356788888765 44444 57898888655543 22121 0123456777788774 2223 22322 245566
Q ss_pred EEEccCCc-----c-----cc-------cCceEEEEeCCCCCEEEEEe
Q 019672 163 VYNVMELH-----S-----HC-------EAPLAAIVLSSNGMYIATAS 193 (337)
Q Consensus 163 i~d~~~~~-----~-----~~-------~~~i~~~~~s~dg~~lat~s 193 (337)
-|.+.... . +. .+.-..|+|.|||.+.++.+
T Consensus 111 R~~~~~~~~~~~~~~~~~~i~~~~p~~~~H~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 111 RMLYDEKKPSGEQLGAPDTVFRGIPKGVIHNGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp EEEBCTTSCTTCCBCCCEEEEEEECCCSSCCCCCEEECTTSCEEEECB
T ss_pred EEEeCCCCcccccCCCcEEEEEcCCCCCCccCccccCCCCCCEEEEEC
Confidence 66654411 0 00 03456699999999877754
No 327
>3q6k_A 43.2 kDa salivary protein; beta propeller, binding protein, serotonin, salivary gland, binding, ligand binging protein; HET: CIT SRO; 2.52A {Lutzomyia longipalpis} PDB: 3q6p_A* 3q6t_A*
Probab=90.55 E-value=9 Score=34.13 Aligned_cols=133 Identities=13% Similarity=0.178 Sum_probs=80.3
Q ss_pred eEEEEECCCC--eeeeeecCCCC----CceEEEEeeC---CC----ccEEEEcCCCCccEEEEEEccCCcc---cc----
Q 019672 114 KTYIYDANTL--AILDTIDTVPN----LKGLCAFSPS---LN----ACFLAVPASTTKGSVLVYNVMELHS---HC---- 173 (337)
Q Consensus 114 ~i~i~d~~~~--~~~~~~~~~~~----~~~~~~~~~~---~~----~~~la~~~~~~dg~v~i~d~~~~~~---~~---- 173 (337)
+|.+||+.+. ++++.+..+.+ ...+..+..+ ++ +.+...+.. ..+-|.|+|+.+++. .|
T Consensus 124 kLv~~DL~t~~~~li~~y~~p~~~~~~~S~l~di~VD~~~~~~~c~~~~aYItD~-~~~gLIVydl~~~~swRv~~~~~~ 202 (381)
T 3q6k_A 124 AIVAYDLKQPNYPEVVRYYFPTRLVEKPTYFGGFAVDVANPKGDCSETFVYITNF-LRGALFIYDHKKQDSWNVTHPTFK 202 (381)
T ss_dssp EEEEEESSSTTCCEEEEEECCGGGCCCGGGEEEEEEEESCTTTTSCSEEEEEEET-TTTEEEEEETTTTEEEEEECGGGS
T ss_pred eEEEEECCCCCceeEEEEECCHHhcccCCccceEEEecccCCCCCCccEEEEEcC-CCCcEEEEECCCCcEEEEccCCCc
Confidence 5778888888 88877754321 1233333333 21 334334433 367799999987642 11
Q ss_pred ----------------cCceEEEEeCCC----CCEEEEEeCCCcEEEEEEcCC-----Cc---eeEeec-cCCcceeEEE
Q 019672 174 ----------------EAPLAAIVLSSN----GMYIATASEQGTIIRVFLVSE-----AT---KSYSFR-RGTYPSTIFS 224 (337)
Q Consensus 174 ----------------~~~i~~~~~s~d----g~~lat~s~dg~~i~vwd~~~-----~~---~~~~~~-~~~~~~~i~~ 224 (337)
...|..+++||+ ++.|.-..-.+. ++|.+.+ .. .++.+. ++. ...-..
T Consensus 203 pd~~~~~~i~G~~~~~~~Gi~gIaLsp~~~~~~~~LYf~plss~--~ly~V~T~~L~~~~~~~~v~~~G~kg~-~s~~~~ 279 (381)
T 3q6k_A 203 AERPTKFDYGGKEYEFKAGIFGITLGDRDSEGNRPAYYLAGSAI--KVYSVNTKELKQKGGKLNPELLGNRGK-YNDAIA 279 (381)
T ss_dssp CCSCEEEEETTEEEEECCCEEEEEECCCCTTSCCEEEEEESSCS--EEEEEEHHHHSSTTCCCCCEEEEECCT-TCCEEE
T ss_pred cccCcceEECCEEeEeccCceEEEecCCcCCCCeEEEEEECCCC--cEEEEEHHHhhCcchhhceEEeeecCC-CCCcce
Confidence 047889999998 788887777664 4665532 21 122221 110 122345
Q ss_pred EEee-cCCCcccEEEEEeCCCcEEEEecCC
Q 019672 225 LSFG-QSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 225 l~fs-~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
+++. .+|. ++++--..+.|..|+..+
T Consensus 280 ~~~D~~~G~---ly~~~~~~~aI~~w~~~~ 306 (381)
T 3q6k_A 280 LAYDPKTKV---IFFAEANTKQVSCWNTQK 306 (381)
T ss_dssp EEECTTTCE---EEEEESSSSEEEEEETTS
T ss_pred EEEeCCCCe---EEEEeccCCeEEEEeCCC
Confidence 6775 6787 788888889999999875
No 328
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=90.36 E-value=1.5 Score=36.01 Aligned_cols=95 Identities=11% Similarity=0.014 Sum_probs=55.0
Q ss_pred EEeeCCCccEEEEcCCCCccEEEEEEccCCccc----ccCce--------EEEEeCCCCCEEEEEeCCCcEEEEEEcCCC
Q 019672 140 AFSPSLNACFLAVPASTTKGSVLVYNVMELHSH----CEAPL--------AAIVLSSNGMYIATASEQGTIIRVFLVSEA 207 (337)
Q Consensus 140 ~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~----~~~~i--------~~~~~s~dg~~lat~s~dg~~i~vwd~~~~ 207 (337)
.++++|++.+.++ . +|.+.-.+..+.... ....| .++.|+|+|.+.++ .||.+. -++-.+.
T Consensus 45 ~laf~P~G~LYaV-~---~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iy-r~~pP~~ 117 (236)
T 1tl2_A 45 FLFLSPGGELYGV-L---NDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLY-KASPPQS 117 (236)
T ss_dssp EEEECTTSCEEEE-E---TTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEE-EESCCCS
T ss_pred eEEECCCccEEEE-e---CCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEE-EeCCCcC
Confidence 5666777777776 3 576666665432111 01223 78999999998887 558754 4554322
Q ss_pred ceeEeeccCC-----cceeEEEEEeecCCCcccEEEEEeCCCcE
Q 019672 208 TKSYSFRRGT-----YPSTIFSLSFGQSMQFQDILVATSSSGSL 246 (337)
Q Consensus 208 ~~~~~~~~~~-----~~~~i~~l~fs~dg~~~~~las~s~dg~v 246 (337)
..-.-+..+. .-..+..|.|.|+|. +.|+. |+.+
T Consensus 118 ~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~---Lyav~--dg~l 156 (236)
T 1tl2_A 118 DTDNWIARATEVGSGGWSGFKFLFFHPNGY---LYAVH--GQQF 156 (236)
T ss_dssp TTCCHHHHSEEEECSSGGGEEEEEECTTSC---EEEEE--TTEE
T ss_pred CCCceeccccEeccCCCCceEEEEECCCce---EEEEe--CCcE
Confidence 1111010000 013478999999998 66666 7774
No 329
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=88.76 E-value=11 Score=32.39 Aligned_cols=101 Identities=12% Similarity=0.106 Sum_probs=57.1
Q ss_pred CCCccEEEEcCCCC------------ccEEEEEEccCCcccccCceEEEEeCCCCCEEEEEe---CCCcEEEEEEcCCCc
Q 019672 144 SLNACFLAVPASTT------------KGSVLVYNVMELHSHCEAPLAAIVLSSNGMYIATAS---EQGTIIRVFLVSEAT 208 (337)
Q Consensus 144 ~~~~~~la~~~~~~------------dg~v~i~d~~~~~~~~~~~i~~~~~s~dg~~lat~s---~dg~~i~vwd~~~~~ 208 (337)
++++.+|.++.... ...|+..++.......-..-.+..|+|+|++|+-.. .+...|..-++.. .
T Consensus 61 ~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dG-s 139 (302)
T 3s25_A 61 NADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLDPDPCIYASLIGNYIYYLHYDTQTATSLYRIRIDG-E 139 (302)
T ss_dssp EECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEECSCEEEEEEETTEEEEEEESSSSCEEEEEEETTS-C
T ss_pred EEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEeecCCccEEEEeCCEEEEEeecCCCCceEEEEECCC-C
Confidence 34556777665311 346777777665432211122336788999998776 2333355556653 3
Q ss_pred eeEeeccCCcceeEEEEEeecCCCcccEEEEEeC-CCcEEEEecCCC
Q 019672 209 KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS-SGSLHVFSPGFA 254 (337)
Q Consensus 209 ~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~-dg~v~iw~l~~~ 254 (337)
...++..+. + .+|+|+++ .|.-.+. ...|.+-++...
T Consensus 140 ~~~~lt~~~----~--~~~~~~g~---~iy~t~~g~~~Iy~~~l~g~ 177 (302)
T 3s25_A 140 EKKKIKNHY----L--FTCNTSDR---YFYYNNPKNGQLYRYDTASQ 177 (302)
T ss_dssp CCEEEESSC----C--CCSEEETT---EEEEECTTTCCEEEEETTTT
T ss_pred CeEEEeCCC----c--eEeeEECC---EEEEEeCCCceEEEEECCCC
Confidence 333443321 1 46789998 6665555 566777777654
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=88.74 E-value=10 Score=32.06 Aligned_cols=180 Identities=11% Similarity=0.075 Sum_probs=91.2
Q ss_pred CEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcCC--ceeEEEEcCCeEEEEE--C----CeEEEEECCCCeeeeeec
Q 019672 59 SLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL--R----EKTYIYDANTLAILDTID 130 (337)
Q Consensus 59 ~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~v~~--d----~~i~i~d~~~~~~~~~~~ 130 (337)
+.+.+++|.. ..+.+.+||..+++....-..+. .-.++....+.+++.+ + +.+.+||+.+.+-...-.
T Consensus 12 ~~l~~~GG~~----~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~ 87 (306)
T 3ii7_A 12 DYRIALFGGS----QPQSCRYFNPKDYSWTDIRCPFEKRRDAACVFWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLG 87 (306)
T ss_dssp CEEEEEECCS----STTSEEEEETTTTEEEECCCCSCCCBSCEEEEETTEEEEECCBSSSBCCEEEEEETTTTEEEEEEC
T ss_pred ceEEEEeCCC----CCceEEEecCCCCCEecCCCCCcccceeEEEEECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCC
Confidence 5566666642 25789999999886543222221 1122223355565554 2 578999998764322211
Q ss_pred CCCCCceEEEEeeCCCccEEEEcCCC----CccEEEEEEccCCcccc--c-----CceEEEEeCCCCCEEEEEeCC----
Q 019672 131 TVPNLKGLCAFSPSLNACFLAVPAST----TKGSVLVYNVMELHSHC--E-----APLAAIVLSSNGMYIATASEQ---- 195 (337)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~la~~~~~----~dg~v~i~d~~~~~~~~--~-----~~i~~~~~s~dg~~lat~s~d---- 195 (337)
.+.......+... ++.+++++|.. ....+.+||+.+.+-.. . ..-.++.+ +++.++.|+.+
T Consensus 88 ~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 163 (306)
T 3ii7_A 88 PPTPRDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQRCSHGMVEA--NGLIYVCGGSLGNNV 163 (306)
T ss_dssp CSSCCBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEESCTT
T ss_pred CCccccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCCcceeEEEEE--CCEEEEECCCCCCCC
Confidence 1111112222222 34566777641 12458899987654211 1 11222332 66777776532
Q ss_pred -----CcEEEEEEcCCCcee--EeeccCCcceeEEEEEeecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019672 196 -----GTIIRVFLVSEATKS--YSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 254 (337)
Q Consensus 196 -----g~~i~vwd~~~~~~~--~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d-----g~v~iw~l~~~ 254 (337)
.. +.+||..+.+-. ..+... ... .+++. -+++ +++.|+.+ ..+.+||+.+.
T Consensus 164 ~~~~~~~-~~~yd~~~~~W~~~~~~p~~--r~~-~~~~~-~~~~---i~v~GG~~~~~~~~~~~~yd~~~~ 226 (306)
T 3ii7_A 164 SGRVLNS-CEVYDPATETWTELCPMIEA--RKN-HGLVF-VKDK---IFAVGGQNGLGGLDNVEYYDIKLN 226 (306)
T ss_dssp TCEECCC-EEEEETTTTEEEEECCCSSC--CBS-CEEEE-ETTE---EEEECCEETTEEBCCEEEEETTTT
T ss_pred cccccce-EEEeCCCCCeEEECCCccch--hhc-ceEEE-ECCE---EEEEeCCCCCCCCceEEEeeCCCC
Confidence 22 468998877532 111111 111 11222 2666 77777654 35888887654
No 331
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=86.68 E-value=15 Score=31.77 Aligned_cols=134 Identities=13% Similarity=0.004 Sum_probs=64.5
Q ss_pred ceEEEEECCCCCEEEEEEcCC--ce-eEEEEcCCeEEEEE--------CCeEEEEEC--CCCeeeeeecCCCCCc---eE
Q 019672 75 RRLCLFNTTTGTALRELNFLT--SI-LAVRLNKKRLVIVL--------REKTYIYDA--NTLAILDTIDTVPNLK---GL 138 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~--~v-~~i~~~~~~~~v~~--------d~~i~i~d~--~~~~~~~~~~~~~~~~---~~ 138 (337)
+.+.++|+.+++....-..+. .- .++....+.+++.+ ...+.+||+ .+.+- ..+...+.+. ..
T Consensus 168 ~~v~~yd~~~~~W~~~~~~p~~~~~~~~~~~~~~~iyv~GG~~~~~~~~~~v~~~d~d~~~~~W-~~~~~~~~~~~~~~~ 246 (357)
T 2uvk_A 168 KFLLSFDPSTQQWSYAGESPWYGTAGAAVVNKGDKTWLINGEAKPGLRTDAVFELDFTGNNLKW-NKLAPVSSPDGVAGG 246 (357)
T ss_dssp CEEEEEETTTTEEEEEEECSSCCCBSCEEEEETTEEEEECCEEETTEECCCEEEEECC---CEE-EECCCSSTTTCCBSC
T ss_pred ccEEEEeCCCCcEEECCCCCCCCcccccEEEECCEEEEEeeecCCCcccCceEEEEecCCCCcE-EecCCCCCCcccccc
Confidence 689999999886554433332 12 34444456666653 235777887 43321 1221111111 22
Q ss_pred EEEeeCCCccEEEEcCCCCc--------------------cEEEEEEccCCccc-----cc--CceEEEEeCCCCCEEEE
Q 019672 139 CAFSPSLNACFLAVPASTTK--------------------GSVLVYNVMELHSH-----CE--APLAAIVLSSNGMYIAT 191 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~~d--------------------g~v~i~d~~~~~~~-----~~--~~i~~~~~s~dg~~lat 191 (337)
.+... ++.+++++|...+ ..+.+||+.+.+-. .. ..-.++. .+++.++.
T Consensus 247 ~~~~~--~~~iyv~GG~~~~~~~~~~~~g~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~--~~~~i~v~ 322 (357)
T 2uvk_A 247 FAGIS--NDSLIFAGGAGFKGSRENYQNGKNYAHEGLKKSYSTDIHLWHNGKWDKSGELSQGRAYGVSLP--WNNSLLII 322 (357)
T ss_dssp EEEEE--TTEEEEECCEECTTHHHHHHTTCSSTTTTCCCEECCEEEECC---CEEEEECSSCCBSSEEEE--ETTEEEEE
T ss_pred eEEEE--CCEEEEEcCccccCCcccccccceeccccccceeeEEEEecCCCceeeCCCCCCCcccceeEE--eCCEEEEE
Confidence 22222 3456667763111 25788998765321 11 1122233 36778888
Q ss_pred EeCCCc-----EEEEEEcCCCceeEee
Q 019672 192 ASEQGT-----IIRVFLVSEATKSYSF 213 (337)
Q Consensus 192 ~s~dg~-----~i~vwd~~~~~~~~~~ 213 (337)
|+.++. -+.++++++++.+...
T Consensus 323 GG~~~~~~~~~~v~~l~~~~~~~~~~~ 349 (357)
T 2uvk_A 323 GGETAGGKAVTDSVLITVKDNKVTVQN 349 (357)
T ss_dssp EEECGGGCEEEEEEEEEC-CCSCEEEC
T ss_pred eeeCCCCCEeeeEEEEEEcCcEeEeee
Confidence 885531 1335588877765443
No 332
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=86.09 E-value=15 Score=31.13 Aligned_cols=170 Identities=18% Similarity=0.042 Sum_probs=84.1
Q ss_pred CceEEEEECCCCCEEEEEEcCC--ceeEEEEcCCeEEEEE-----------CCeEEEEECCCCeeeeeecCCCCCceEEE
Q 019672 74 PRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL-----------REKTYIYDANTLAILDTIDTVPNLKGLCA 140 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~v~~-----------d~~i~i~d~~~~~~~~~~~~~~~~~~~~~ 140 (337)
-+.+.++|..+++....-..+. .-.++....+.+++.+ .+.+.+||+.+.+-...-..+.......+
T Consensus 38 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~ 117 (308)
T 1zgk_A 38 LSYLEAYNPSNGTWLRLADLQVPRSGLAGCVVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQWSPCAPMSVPRNRIGV 117 (308)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCEEEETTEEEECCCEEEEETTTTEEEECCCCSSCCBTCEE
T ss_pred cceEEEEcCCCCeEeECCCCCcccccceEEEECCEEEEECCCcCCCCCCeecceEEEECCCCCeEeECCCCCcCccccEE
Confidence 4679999998876543222221 1112233355555543 13588999877642221111111111122
Q ss_pred EeeCCCccEEEEcCCCC---ccEEEEEEccCCcccc-------cCceEEEEeCCCCCEEEEEeCCCc----EEEEEEcCC
Q 019672 141 FSPSLNACFLAVPASTT---KGSVLVYNVMELHSHC-------EAPLAAIVLSSNGMYIATASEQGT----IIRVFLVSE 206 (337)
Q Consensus 141 ~~~~~~~~~la~~~~~~---dg~v~i~d~~~~~~~~-------~~~i~~~~~s~dg~~lat~s~dg~----~i~vwd~~~ 206 (337)
... ++.+++.+|... ...+.+||+.+.+-.. ...-.++.+ +++.++.|+.++. .+.+||..+
T Consensus 118 ~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~ 193 (308)
T 1zgk_A 118 GVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTRRIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPER 193 (308)
T ss_dssp EEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTT
T ss_pred EEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCccccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCC
Confidence 222 345666666311 1458889987654211 122223333 6677777765432 146889877
Q ss_pred CceeE--eeccCCcceeEEEEEeecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019672 207 ATKSY--SFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 254 (337)
Q Consensus 207 ~~~~~--~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d-----g~v~iw~l~~~ 254 (337)
.+-.. .+... ...-.++.+ +++ +++.|+.+ ..+.+||+.+.
T Consensus 194 ~~W~~~~~~p~~--r~~~~~~~~--~~~---iyv~GG~~~~~~~~~v~~yd~~~~ 241 (308)
T 1zgk_A 194 NEWRMITAMNTI--RSGAGVCVL--HNC---IYAAGGYDGQDQLNSVERYDVETE 241 (308)
T ss_dssp TEEEECCCCSSC--CBSCEEEEE--TTE---EEEECCBCSSSBCCCEEEEETTTT
T ss_pred CeEeeCCCCCCc--cccceEEEE--CCE---EEEEeCCCCCCccceEEEEeCCCC
Confidence 65321 11111 111112222 666 77777654 45888887653
No 333
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=85.39 E-value=18 Score=31.56 Aligned_cols=98 Identities=11% Similarity=0.052 Sum_probs=50.1
Q ss_pred ceeEEEEcCCe--EEEEE-CCeEEEEECCCCeeeeeecC-----CCCCceEEEEeeCCC---ccEEEEcCCC--C----c
Q 019672 96 SILAVRLNKKR--LVIVL-REKTYIYDANTLAILDTIDT-----VPNLKGLCAFSPSLN---ACFLAVPAST--T----K 158 (337)
Q Consensus 96 ~v~~i~~~~~~--~~v~~-d~~i~i~d~~~~~~~~~~~~-----~~~~~~~~~~~~~~~---~~~la~~~~~--~----d 158 (337)
....|.+.+++ ++++. .+.|++++. +++....+.. .....+...++.+|+ +..|.+.... . .
T Consensus 19 ~P~~i~~~pdG~~l~V~e~~G~i~~~~~-~g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~g~~~ 97 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLITLRGGELRHWQA-GKGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDDGKAG 97 (353)
T ss_dssp SEEEEEECSTTCCEEEEETTTEEEEEET-TTEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSSSCEE
T ss_pred CcEEEEEcCCCCEEEEEeCCceEEEEeC-CCceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCCCCce
Confidence 45678887764 45554 778988885 3332211111 112235667777774 3333332210 0 2
Q ss_pred cEEEEEEccCC-------ccc----c-----cCceEEEEeCCCCCEEEEEeC
Q 019672 159 GSVLVYNVMEL-------HSH----C-----EAPLAAIVLSSNGMYIATASE 194 (337)
Q Consensus 159 g~v~i~d~~~~-------~~~----~-----~~~i~~~~~s~dg~~lat~s~ 194 (337)
..|..|++... +.+ . .+.-..++|+|||.+.++-++
T Consensus 98 ~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~Gd 149 (353)
T 2g8s_A 98 TAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNHFGGRLVFDGKGYLFIALGE 149 (353)
T ss_dssp EEEEEEEECTTSSBEEEEEEEEECSSCCBSSSCCCCCEEECSSSEEEEEECC
T ss_pred eEEEEEEECCCCCCCCceEEEEEECCCCCCCcccCccEEECCCCcEEEEECC
Confidence 34555655322 000 0 022467999999976666543
No 334
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=85.33 E-value=3.8 Score=38.52 Aligned_cols=87 Identities=11% Similarity=0.080 Sum_probs=56.1
Q ss_pred EEEEECCC----C-eeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc------------c-c--
Q 019672 115 TYIYDANT----L-AILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH------------C-E-- 174 (337)
Q Consensus 115 i~i~d~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~------------~-~-- 174 (337)
+.+.|.+. + ..+..+..+.+|.++ ..+||+.+++.+|. .+.+|.++|+...... . +
T Consensus 300 v~ViD~~~~~~~~~~~~~~iP~pksPHGv---~vsPDGkyi~v~GK-LsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e 375 (638)
T 3sbq_A 300 TPVLDGRKKDGKDSKFTRYVPVPKNPHGC---NTSSDGKYFIAAGK-LSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPE 375 (638)
T ss_dssp CCEEECSCBTTBCCSSEEEEEESSSCCCE---EECTTSCEEEEECT-TSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCB
T ss_pred eeEEccccccccCCceEEEEeCCCCCcce---eeCCCCCEEEEcCC-CCCeEEEEEeehhhhhhhccccCcccceEeecc
Confidence 55555544 1 233344444445454 55788999999987 6899999999853221 0 1
Q ss_pred --CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCC
Q 019672 175 --APLAAIVLSSNGMYIATASEQGTIIRVFLVSE 206 (337)
Q Consensus 175 --~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~ 206 (337)
......+|+++|.-..|---|..+ --|++..
T Consensus 376 ~GlGPlHt~Fd~~G~aYTtlfidSqv-vkWni~~ 408 (638)
T 3sbq_A 376 LGLGPLHTTFDGRGNAYTTLFIDSQV-VKWNMEE 408 (638)
T ss_dssp CCSCEEEEEECSSSEEEEEETTTTEE-EEEEHHH
T ss_pred CCCcccEEEECCCCceEeeeeecceE-EEEeccH
Confidence 445788999999544444477765 5799864
No 335
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=85.14 E-value=16 Score=30.65 Aligned_cols=170 Identities=8% Similarity=-0.038 Sum_probs=85.4
Q ss_pred CceEEEEECCCCCEEEEEEcCC--ceeEEEEcCCeEEEEE--C-----CeEEEEECCCCee--eeeecCCCCC-ceEEEE
Q 019672 74 PRRLCLFNTTTGTALRELNFLT--SILAVRLNKKRLVIVL--R-----EKTYIYDANTLAI--LDTIDTVPNL-KGLCAF 141 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~~~~~--~v~~i~~~~~~~~v~~--d-----~~i~i~d~~~~~~--~~~~~~~~~~-~~~~~~ 141 (337)
-+.+.++|+.+++....-..+. .-.++....+.+++.+ + +.+.+||+.+.+. -..+...+.+ ....+.
T Consensus 30 ~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~ 109 (301)
T 2vpj_A 30 IDVVEKYDPKTQEWSFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGAT 109 (301)
T ss_dssp CCCEEEEETTTTEEEECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEE
T ss_pred eeEEEEEcCCCCeEEeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEE
Confidence 4678999998876433222222 1122333445666554 1 4689999877640 1112111111 112222
Q ss_pred eeCCCccEEEEcCCCC---ccEEEEEEccCCcccc-----c--CceEEEEeCCCCCEEEEEeCCCc----EEEEEEcCCC
Q 019672 142 SPSLNACFLAVPASTT---KGSVLVYNVMELHSHC-----E--APLAAIVLSSNGMYIATASEQGT----IIRVFLVSEA 207 (337)
Q Consensus 142 ~~~~~~~~la~~~~~~---dg~v~i~d~~~~~~~~-----~--~~i~~~~~s~dg~~lat~s~dg~----~i~vwd~~~~ 207 (337)
.. ++.+++.+|... ...+.+||+.+.+-.. . ..-.++.+ +++.++.|+.++. .+.+||..+.
T Consensus 110 ~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~ 185 (301)
T 2vpj_A 110 TL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTAREGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTG 185 (301)
T ss_dssp EE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSCCBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTT
T ss_pred EE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCCcccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCC
Confidence 22 355666666321 2468899987654211 1 12222333 6777777765431 2468998876
Q ss_pred ceeE--eeccCCcceeEEEEEeecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019672 208 TKSY--SFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 254 (337)
Q Consensus 208 ~~~~--~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d-----g~v~iw~l~~~ 254 (337)
+-.. .+... ... .+++. -+++ +++.|+.+ ..+.+||+++.
T Consensus 186 ~W~~~~~~p~~--r~~-~~~~~-~~~~---i~v~GG~~~~~~~~~v~~yd~~~~ 232 (301)
T 2vpj_A 186 HWTNVTPMATK--RSG-AGVAL-LNDH---IYVVGGFDGTAHLSSVEAYNIRTD 232 (301)
T ss_dssp EEEEECCCSSC--CBS-CEEEE-ETTE---EEEECCBCSSSBCCCEEEEETTTT
T ss_pred cEEeCCCCCcc--ccc-ceEEE-ECCE---EEEEeCCCCCcccceEEEEeCCCC
Confidence 5322 11111 111 11222 2566 77777764 46888988654
No 336
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=84.96 E-value=15 Score=33.53 Aligned_cols=96 Identities=11% Similarity=0.067 Sum_probs=50.6
Q ss_pred EEEeeCCCccEEEEcCCCCccEEEEEEccCCccc-------------ccCceEEEEeCCC----CCEEEEEeC-------
Q 019672 139 CAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH-------------CEAPLAAIVLSSN----GMYIATASE------- 194 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~-------------~~~~i~~~~~s~d----g~~lat~s~------- 194 (337)
.++.+.|++.++++.. ..+.|.+++..++... .+..+..|+|+|| +.+.++-+.
T Consensus 30 ~~~a~~pdG~l~V~e~--~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~~~~~~ 107 (454)
T 1cru_A 30 HALLWGPDNQIWLTER--ATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKNPKSTD 107 (454)
T ss_dssp EEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEECTTC--
T ss_pred eEEEEcCCCcEEEEEc--CCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccccCCCc
Confidence 4566667777776653 2346777765433211 1244669999994 544444432
Q ss_pred -----CCcEEEEEEcCCC-------ceeE-eeccCCcceeEEEEEeecCCCcccEEEEEe
Q 019672 195 -----QGTIIRVFLVSEA-------TKSY-SFRRGTYPSTIFSLSFGQSMQFQDILVATS 241 (337)
Q Consensus 195 -----dg~~i~vwd~~~~-------~~~~-~~~~~~~~~~i~~l~fs~dg~~~~~las~s 241 (337)
... |.-|+...+ +.+. .+... ..+....|+|.|||. ++++.+
T Consensus 108 ~~~~~~~~-v~r~~~~~~~~~~~~~~~i~~~~p~~-~~H~~~~l~f~pDG~---Lyv~~G 162 (454)
T 1cru_A 108 KELPNQTI-IRRYTYNKSTDTLEKPVDLLAGLPSS-KDHQSGRLVIGPDQK---IYYTIG 162 (454)
T ss_dssp CCSCEEEE-EEEEEEETTTTEEEEEEEEEEEECCC-SSCCEEEEEECTTSC---EEEEEC
T ss_pred cccccccE-EEEEEECCCCCCcCCcEEEEEcCCCC-CCCCCCeEeECCCCe---EEEEEC
Confidence 123 334444322 1122 12211 112367899999999 555544
No 337
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=84.43 E-value=20 Score=31.25 Aligned_cols=26 Identities=12% Similarity=0.234 Sum_probs=19.3
Q ss_pred CeEEEEEcCCCCEEEEEcCCceEEEe
Q 019672 9 PVFFVSFNQDNSGFALSTKDGFKIFD 34 (337)
Q Consensus 9 ~v~~~~fs~dg~~la~g~~~g~~vw~ 34 (337)
.-+.++|.|||+++++-....+.+++
T Consensus 32 ~P~~ia~~pdG~l~V~e~~g~I~~i~ 57 (352)
T 2ism_A 32 VPWALAFLPDGGMLIAERPGRIRLFR 57 (352)
T ss_dssp CEEEEEECTTSCEEEEETTTEEEEEE
T ss_pred CceEEEEcCCCeEEEEeCCCeEEEEE
Confidence 34689999999977766555567777
No 338
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=83.58 E-value=19 Score=30.43 Aligned_cols=167 Identities=10% Similarity=0.117 Sum_probs=83.1
Q ss_pred ceEEEEECCCCCEEEEEEcCC----ceeEEEEcCCeEEEEEC-------------CeEEEEECCCCeeeeeecCCCCCce
Q 019672 75 RRLCLFNTTTGTALRELNFLT----SILAVRLNKKRLVIVLR-------------EKTYIYDANTLAILDTIDTVPNLKG 137 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~----~v~~i~~~~~~~~v~~d-------------~~i~i~d~~~~~~~~~~~~~~~~~~ 137 (337)
+.+.+||..+++-.. ...+. .-.++....+.+++.+. +.+.+||..+.+-. .+...+.+..
T Consensus 13 ~~~~~yd~~~~~W~~-~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~ 90 (315)
T 4asc_A 13 EGAVAYDPAANECYC-ASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWL-GMPPLPSPRC 90 (315)
T ss_dssp TEEEEEETTTTEEEE-EECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEE-ECCCBSSCEE
T ss_pred CceEEECCCCCeEec-CCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEE-ECCCCCcchh
Confidence 479999999887654 33322 12233334455554331 13788998876432 2221122211
Q ss_pred EEEEeeCCCccEEEEcCC------CCccEEEEEEccCCcccc-----c--CceEEEEeCCCCCEEEEEeC-C-----CcE
Q 019672 138 LCAFSPSLNACFLAVPAS------TTKGSVLVYNVMELHSHC-----E--APLAAIVLSSNGMYIATASE-Q-----GTI 198 (337)
Q Consensus 138 ~~~~~~~~~~~~la~~~~------~~dg~v~i~d~~~~~~~~-----~--~~i~~~~~s~dg~~lat~s~-d-----g~~ 198 (337)
-.+.... ++.+++.+|. .....+.+||+.+.+-.. . ..-.++. .+++.++.|+. + ..
T Consensus 91 ~~~~~~~-~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~- 166 (315)
T 4asc_A 91 LFGLGEA-LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYVVYGHTVLS--HMDLVYVIGGKGSDRKCLNK- 166 (315)
T ss_dssp SCEEEEE-TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEE--ETTEEEEECCBCTTSCBCCC-
T ss_pred ceeEEEE-CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCcccceeEEE--ECCEEEEEeCCCCCCcccce-
Confidence 1122222 3456666662 112568899987654211 1 1122222 36677777765 2 23
Q ss_pred EEEEEcCCCcee--EeeccCCcceeEEEEEeecCCCcccEEEEEeCCC-----cEEEEecCCC
Q 019672 199 IRVFLVSEATKS--YSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG-----SLHVFSPGFA 254 (337)
Q Consensus 199 i~vwd~~~~~~~--~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg-----~v~iw~l~~~ 254 (337)
+.+||..+.+-. ..+... +.. .+++. -+++ +++.|+.++ .+.+||+.+.
T Consensus 167 ~~~yd~~~~~W~~~~~~p~~--r~~-~~~~~-~~~~---iyv~GG~~~~~~~~~~~~yd~~~~ 222 (315)
T 4asc_A 167 MCVYDPKKFEWKELAPMQTA--RSL-FGATV-HDGR---IIVAAGVTDTGLTSSAEVYSITDN 222 (315)
T ss_dssp EEEEETTTTEEEECCCCSSC--CBS-CEEEE-ETTE---EEEEEEECSSSEEEEEEEEETTTT
T ss_pred EEEEeCCCCeEEECCCCCCc--hhc-eEEEE-ECCE---EEEEeccCCCCccceEEEEECCCC
Confidence 468898876432 111111 111 11222 2666 777777654 4788887653
No 339
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=83.33 E-value=34 Score=33.05 Aligned_cols=175 Identities=11% Similarity=0.072 Sum_probs=91.1
Q ss_pred CceEEEEECCCCCEEEEE-E-----cCC---ceeEEEEc-CCeEEEEE--C------CeEEEEECCCCeeeeeecCCCCC
Q 019672 74 PRRLCLFNTTTGTALREL-N-----FLT---SILAVRLN-KKRLVIVL--R------EKTYIYDANTLAILDTIDTVPNL 135 (337)
Q Consensus 74 d~~v~iwd~~~~~~~~~~-~-----~~~---~v~~i~~~-~~~~~v~~--d------~~i~i~d~~~~~~~~~~~~~~~~ 135 (337)
-+.+.++|..+++....- . .+. ....+.+. .+.+++.+ + +.+.+||+.+.+-.. +...+.+
T Consensus 411 ~~~v~~yd~~~~~W~~~~~~~p~~~~p~~R~~hs~~~~~~~~~lyv~GG~~~~~~~~~dv~~yd~~t~~W~~-~~~~p~~ 489 (695)
T 2zwa_A 411 VNEILQLSIHYDKIDMKNIEVSSSEVPVARMCHTFTTISRNNQLLLIGGRKAPHQGLSDNWIFDMKTREWSM-IKSLSHT 489 (695)
T ss_dssp CCCEEEEEECSSCEEEEECCCCCSCCCCCCBSCEEEEETTTTEEEEECCBSSTTCBCCCCEEEETTTTEEEE-CCCCSBC
T ss_pred cCcEEEEECCCCeEEEeccCCCCCCCCccccceEEEEEccCCEEEEEcCCCCCCCccccEEEEeCCCCcEEE-CCCCCCC
Confidence 467899999988755433 2 121 12334443 56666654 1 358899988753221 1111111
Q ss_pred -ceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCccc----------ccCceEEEEeCCC-CCEEEEEeC--CC----c
Q 019672 136 -KGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHSH----------CEAPLAAIVLSSN-GMYIATASE--QG----T 197 (337)
Q Consensus 136 -~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~~----------~~~~i~~~~~s~d-g~~lat~s~--dg----~ 197 (337)
....+... .++.+++++|....+.+.+||..+..-. ....-.+++++.+ ++.++.|+. +| .
T Consensus 490 R~~h~~~~~-~~~~iyv~GG~~~~~~v~~yd~~t~~W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~ 568 (695)
T 2zwa_A 490 RFRHSACSL-PDGNVLILGGVTEGPAMLLYNVTEEIFKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSD 568 (695)
T ss_dssp CBSCEEEEC-TTSCEEEECCBCSSCSEEEEETTTTEEEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCC
T ss_pred cccceEEEE-cCCEEEEECCCCCCCCEEEEECCCCceEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeC
Confidence 11222221 2566778887533337899998765311 0122334555655 677777765 22 2
Q ss_pred EEEEEEcCCCce-----eEeeccC--CcceeEEEEEeecCCCcccEEEEEeC--------CCcEEEEecCCC
Q 019672 198 IIRVFLVSEATK-----SYSFRRG--TYPSTIFSLSFGQSMQFQDILVATSS--------SGSLHVFSPGFA 254 (337)
Q Consensus 198 ~i~vwd~~~~~~-----~~~~~~~--~~~~~i~~l~fs~dg~~~~~las~s~--------dg~v~iw~l~~~ 254 (337)
-+.+||+.+.+- -..+... ..+.. .+++...+++ +++.|+. ...|.+||+.+.
T Consensus 569 ~v~~yd~~~~~w~~~~~W~~~~~~p~~~R~~-~~~~~~~~~~---iyv~GG~~~~~~~~~~~~v~~yd~~t~ 636 (695)
T 2zwa_A 569 KAIIFKYDAENATEPITVIKKLQHPLFQRYG-SQIKYITPRK---LLIVGGTSPSGLFDRTNSIISLDPLSE 636 (695)
T ss_dssp EEEEEEECTTCSSCCEEEEEEEECGGGCCBS-CEEEEEETTE---EEEECCBCSSCCCCTTTSEEEEETTTT
T ss_pred cEEEEEccCCccccceEEEEcCCCCCCCccc-ceEEEeCCCE---EEEECCccCCCCCCCCCeEEEEECCCC
Confidence 257899887761 1111110 00111 1223334466 7777774 345888988654
No 340
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=83.12 E-value=4.1 Score=41.17 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=33.0
Q ss_pred CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEee
Q 019672 175 APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSF 213 (337)
Q Consensus 175 ~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~ 213 (337)
..+.+++..++..++.|-+.|++ +|||++.+++++.+.
T Consensus 236 ~~~~~~~~~~~~~~lftl~~D~~-LRiWsl~t~~~v~t~ 273 (950)
T 4gq2_M 236 NTIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETI 273 (950)
T ss_dssp TCEEEEEEETTTTEEEEEETTCE-EEEEETTTTEEEEEE
T ss_pred ceEEEEeecCCCcEEEEEECCCE-EEEEECCCCCeEeee
Confidence 45788888888899999999998 699999999988764
No 341
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=82.07 E-value=25 Score=30.67 Aligned_cols=173 Identities=13% Similarity=0.074 Sum_probs=86.5
Q ss_pred CceEEEEECCCCC-EEEEEE----cCCceeEEEEcCC-----eEEEEE-C--------CeEEEEECCCC-------eee-
Q 019672 74 PRRLCLFNTTTGT-ALRELN----FLTSILAVRLNKK-----RLVIVL-R--------EKTYIYDANTL-------AIL- 126 (337)
Q Consensus 74 d~~v~iwd~~~~~-~~~~~~----~~~~v~~i~~~~~-----~~~v~~-d--------~~i~i~d~~~~-------~~~- 126 (337)
+++|.++| ..++ .+..+. .......|+++++ .++++. . +.|..|+.... +.+
T Consensus 48 ~g~I~~~d-~~G~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~ 126 (354)
T 3a9g_A 48 PGRLVLIS-PSGKKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLI 126 (354)
T ss_dssp TTEEEEEC-SSCEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEE
T ss_pred CCEEEEEe-CCCceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEE
Confidence 57888887 3444 222221 1235788999986 566654 2 56777776543 111
Q ss_pred eeecCCCCCceEEEEeeCCCccEEEEcCCC-----------CccEEEEEEccCCc---------cccc---CceEEEEeC
Q 019672 127 DTIDTVPNLKGLCAFSPSLNACFLAVPAST-----------TKGSVLVYNVMELH---------SHCE---APLAAIVLS 183 (337)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~la~~~~~-----------~dg~v~i~d~~~~~---------~~~~---~~i~~~~~s 183 (337)
..+.... ......+.+.|++.+.++.+.. ..|.|.-+|....- .+.. .....++|+
T Consensus 127 ~~~~~~~-~h~~~~l~~~pDG~Lyvt~G~~~~~~~~~d~~~~~G~I~ri~~dG~~p~~npf~~~~i~a~G~rnp~Gla~d 205 (354)
T 3a9g_A 127 DGIPGAY-IHNGGRIRFGPDGMLYITTGDAADPRLAQDLSSLAGKILRVDEEGRPPADNPFPNSPIWSYGHRNPQGIDWH 205 (354)
T ss_dssp EEEECCS-SCCCCCEEECTTSCEEEECCCTTCGGGGTCTTCCSSEEEEECTTSCCCTTSSSTTCCEEEECCSCCCEEEEC
T ss_pred EcCCCCC-CcCCceEEECCCCcEEEEECCCCCCccccCCCCCCeEEEEEcCCCCCCCCCCCCCCcEEEEccCCcceEEEe
Confidence 1122111 1111234556677666665421 12556666654210 0100 335689999
Q ss_pred C-CCCEEEEEeCCCcEEEEEEcCCCc------------------eeEeeccCCcceeEEEEEee-------cCCCcccEE
Q 019672 184 S-NGMYIATASEQGTIIRVFLVSEAT------------------KSYSFRRGTYPSTIFSLSFG-------QSMQFQDIL 237 (337)
Q Consensus 184 ~-dg~~lat~s~dg~~i~vwd~~~~~------------------~~~~~~~~~~~~~i~~l~fs-------~dg~~~~~l 237 (337)
| +|++.++-......=.|.-+..|. .+..+. ........++|. .+|. ++
T Consensus 206 ~~~g~l~v~d~g~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~~~--~~~~ap~G~~~y~g~~fp~~~G~---l~ 280 (354)
T 3a9g_A 206 RASGVMVATEHGPVGHDEVNIILKGGNYGWPLATGKAGRGEFVDPVIDTG--SETWAPSGASFVHGDMFPGLRGW---LL 280 (354)
T ss_dssp TTTCCEEEEECCSSSCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEECT--TCCCCEEEEEECCSSSCGGGTTE---EE
T ss_pred CCCCCEEEEecCCCCCcEEEEecCCCcCCCCcccCCCCCCCCcCCEeecC--CCCcCCcceEEECCCCCcccCCc---EE
Confidence 9 677666533221101122223322 111221 111236778884 5676 66
Q ss_pred EEEeCCCcEEEEecCC
Q 019672 238 VATSSSGSLHVFSPGF 253 (337)
Q Consensus 238 as~s~dg~v~iw~l~~ 253 (337)
++.-..+.|...+++.
T Consensus 281 v~~~~~~~v~~~~~~~ 296 (354)
T 3a9g_A 281 IACLRGSMLAAVNFGD 296 (354)
T ss_dssp EEETTTTEEEEEEECG
T ss_pred EEEcCCCEEEEEEECC
Confidence 6666667788888764
No 342
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=82.01 E-value=36 Score=32.39 Aligned_cols=139 Identities=8% Similarity=-0.052 Sum_probs=74.8
Q ss_pred EEEEECCeEEEEECCCCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc--c-cc--CceEEEE
Q 019672 107 LVIVLREKTYIYDANTLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--H-CE--APLAAIV 181 (337)
Q Consensus 107 ~~v~~d~~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~--~-~~--~~i~~~~ 181 (337)
++++..+.|+..++.............+.....++.+++.+..|..+.. ..+.|..+++..... + .. .....++
T Consensus 320 Ll~~~~~~i~~i~l~~~~~~~~~~~~~~l~~~~~ld~d~~~~~ly~sD~-~~~~I~r~~~~g~~~~~v~~~~~~~p~GlA 398 (619)
T 3s94_A 320 LLLARRTDLRRISLDTPDFTDIVLQLEDIRHAIAIDYDPVEGYIYWTDD-EVRAIRRSFIDGSGSQFVVTAQIAHPDGIA 398 (619)
T ss_dssp EEEEESSCEEEEESSSTTCCCEECCCSCCSSEEEEEEETTTTEEEEEET-TTTEEEEEETTSCSCEEEECSSCSCCCEEE
T ss_pred EEEEcccceEEEecCCCccceeEEeccccCccEEEEEEcCCCeEEEEeC-CCCeEEEEEcCCCccEEEEECCCCCcCceE
Confidence 3344456666666654422111111112234567777765555555543 467888888865322 1 11 4677899
Q ss_pred eCCCCC-EEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecC-CCcccEEEEEe-CCCcEEEEecC
Q 019672 182 LSSNGM-YIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQS-MQFQDILVATS-SSGSLHVFSPG 252 (337)
Q Consensus 182 ~s~dg~-~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~d-g~~~~~las~s-~dg~v~iw~l~ 252 (337)
+++.+. +..+-+..++ |.+.++.... ...+... .-.....|++.|. |. ++.+-. ....|...+++
T Consensus 399 vD~~~~~lY~tD~~~~~-I~v~~~~G~~-~~~l~~~-~l~~P~~iavdp~~G~---ly~tD~g~~~~I~r~~~d 466 (619)
T 3s94_A 399 VDWVARNLYWTDTGTDR-IEVTRLNGTM-RKILISE-DLEEPRAIVLDPMVGY---MYWTDWGEIPKIERAALD 466 (619)
T ss_dssp EETTTTEEEEEETTTTE-EEEEETTSCS-CEEEECT-TCCSEEEEEEETTTTE---EEEEECSSSCEEEEEETT
T ss_pred EecccCcEEEEeCCCCc-EEEEeCCCCe-EEEEEEC-CCCCeeeEEEEcCCCc---EEEecCCCCCEEEEEccC
Confidence 997555 4444444554 6888886443 2333211 1234688999997 54 444432 23556666654
No 343
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=81.88 E-value=17 Score=31.80 Aligned_cols=96 Identities=17% Similarity=0.214 Sum_probs=52.4
Q ss_pred EEEeeCCCccEEEEcCCCCccEEEEEEccCCcc--c---------ccCceEEEEeCCC----CCEEEEEe--CCCcEEEE
Q 019672 139 CAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--H---------CEAPLAAIVLSSN----GMYIATAS--EQGTIIRV 201 (337)
Q Consensus 139 ~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~--~---------~~~~i~~~~~s~d----g~~lat~s--~dg~~i~v 201 (337)
..+.+.|++.++++.- ..|.|.+++...++. + .......|+|+|| +.+.++-+ .+..+. -
T Consensus 35 ~~ia~~pdG~llVter--~~G~I~~v~~~~g~~~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~yt~~~~~~v~-R 111 (347)
T 3das_A 35 WGLAPLPGGDLLVSSR--DEATITRVDAKTGRKTELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYFTSASDNRIV-R 111 (347)
T ss_dssp EEEEECTTSCEEEEET--TTCEEEEECTTTCCEEEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEEECSSSEEEE-E
T ss_pred eEEEEcCCCcEEEEEe--cCCEEEEEECCCCcEeeecccCceeecCCCCceeeEeccccccCCEEEEEEecCCCCEEE-E
Confidence 4556667777776653 268888887654332 1 0256789999995 54444322 333433 3
Q ss_pred EEcCCC----------ceeE-eeccCCcceeEEEEEeecCCCcccEEEEEe
Q 019672 202 FLVSEA----------TKSY-SFRRGTYPSTIFSLSFGQSMQFQDILVATS 241 (337)
Q Consensus 202 wd~~~~----------~~~~-~~~~~~~~~~i~~l~fs~dg~~~~~las~s 241 (337)
|.+..+ +.+. .+..+. .+.-..|+|.|||. ++++.+
T Consensus 112 ~~~~~~~~~~~~~~~~~~i~~~~p~~~-~H~g~~l~fgpDG~---Lyvt~G 158 (347)
T 3das_A 112 MLYDEKKPSGEQLGAPDTVFRGIPKGV-IHNGGRIAFGPDKM---LYAGTG 158 (347)
T ss_dssp EEBCTTSCTTCCBCCCEEEEEEECCCS-SCCCCCEEECTTSC---EEEECB
T ss_pred EEeCCCCcccccCCCcEEEEEcCCCCC-CccCccccCCCCCC---EEEEEC
Confidence 554431 1121 122111 11235689999998 666544
No 344
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=78.63 E-value=28 Score=29.09 Aligned_cols=168 Identities=13% Similarity=0.096 Sum_probs=82.8
Q ss_pred ceEEEEECCCCCEEEEEEcCCc--eeEEEEcCCeEEEEE--C-----CeEEEEECCCCeeeeeecCCCCC-ceEEEEeeC
Q 019672 75 RRLCLFNTTTGTALRELNFLTS--ILAVRLNKKRLVIVL--R-----EKTYIYDANTLAILDTIDTVPNL-KGLCAFSPS 144 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~~--v~~i~~~~~~~~v~~--d-----~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~ 144 (337)
+.+..+|+.+++....-..+.+ -.++....+.+++.+ + +.+.+||..+.+-. .+...+.+ ....+...
T Consensus 30 ~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~-~~~~~p~~r~~~~~~~~- 107 (302)
T 2xn4_A 30 RSVECYDFKEERWHQVAELPSRRCRAGMVYMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWT-SVANMRDRRSTLGAAVL- 107 (302)
T ss_dssp CCEEEEETTTTEEEEECCCSSCCBSCEEEEETTEEEEESCBCSSSBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE-
T ss_pred CcEEEEcCcCCcEeEcccCCcccccceEEEECCEEEEEeCcCCCccccceEEECCCCCcee-eCCCCCccccceEEEEE-
Confidence 5688999988764432222221 122233355666654 1 36889998876422 22111111 11222222
Q ss_pred CCccEEEEcCCCC---ccEEEEEEccCCcccc-------cCceEEEEeCCCCCEEEEEeCCCc------EEEEEEcCCCc
Q 019672 145 LNACFLAVPASTT---KGSVLVYNVMELHSHC-------EAPLAAIVLSSNGMYIATASEQGT------IIRVFLVSEAT 208 (337)
Q Consensus 145 ~~~~~la~~~~~~---dg~v~i~d~~~~~~~~-------~~~i~~~~~s~dg~~lat~s~dg~------~i~vwd~~~~~ 208 (337)
++.+++++|... -..+.+||+.+.+-.. .....++.+ +++.++.|+.++. .+.+||..+.+
T Consensus 108 -~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~ 184 (302)
T 2xn4_A 108 -NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTRRSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNE 184 (302)
T ss_dssp -TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTE
T ss_pred -CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCcccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCc
Confidence 345666665311 1457888987654211 112222333 5677776654321 14689988765
Q ss_pred eeE--eeccCCcceeEEEEEeecCCCcccEEEEEeCC-----CcEEEEecCCC
Q 019672 209 KSY--SFRRGTYPSTIFSLSFGQSMQFQDILVATSSS-----GSLHVFSPGFA 254 (337)
Q Consensus 209 ~~~--~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d-----g~v~iw~l~~~ 254 (337)
-.. .+... ... .+++. -+++ +++.|+.+ ..+.+||+++.
T Consensus 185 W~~~~~~p~~--r~~-~~~~~-~~~~---iyv~GG~~~~~~~~~~~~yd~~~~ 230 (302)
T 2xn4_A 185 WTYIAEMSTR--RSG-AGVGV-LNNL---LYAVGGHDGPLVRKSVEVYDPTTN 230 (302)
T ss_dssp EEEECCCSSC--CBS-CEEEE-ETTE---EEEECCBSSSSBCCCEEEEETTTT
T ss_pred EEECCCCccc--ccc-ccEEE-ECCE---EEEECCCCCCcccceEEEEeCCCC
Confidence 321 22111 111 12222 2566 77777764 36888887653
No 345
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=78.45 E-value=8.5 Score=37.32 Aligned_cols=36 Identities=6% Similarity=0.218 Sum_probs=28.9
Q ss_pred ceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeec
Q 019672 176 PLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFR 214 (337)
Q Consensus 176 ~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~ 214 (337)
.|.++.+. .++|+|-+.|.+ +|+||+.+++++.+..
T Consensus 223 ~Is~~~~~--~~fLftL~~Dh~-LRiWsL~t~~lv~t~D 258 (729)
T 3f7f_A 223 VISCKLFH--ERYLIVLTQNCH-LKIWDLTSFTLIQDYD 258 (729)
T ss_dssp EEEEEEET--TTEEEEEETTCE-EEEEETTTTEEEEEEE
T ss_pred eEEEeccC--CcEEEEEEcCCe-EEEEEcCCCceEEeec
Confidence 46666653 679999999997 6999999999876654
No 346
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=76.69 E-value=9.8 Score=36.09 Aligned_cols=61 Identities=11% Similarity=0.121 Sum_probs=40.6
Q ss_pred ceEEEEeCCCCCEEEEEeCC----------C-cEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEE
Q 019672 176 PLAAIVLSSNGMYIATASEQ----------G-TIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT 240 (337)
Q Consensus 176 ~i~~~~~s~dg~~lat~s~d----------g-~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~ 240 (337)
..-.|+|+|+|.+++.-..+ + ..+.+.+..+++. +.|-.+...++++.++|+||++ .|.+.
T Consensus 477 ~PDNL~fd~~G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~-~rf~~~P~gaE~TG~~fspDg~---tlfvn 548 (592)
T 3zwu_A 477 SPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEI-RRFMVGPIGCEVTGISFSPDQK---TLFVG 548 (592)
T ss_dssp CEEEEEECTTCCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCE-EEEEECCTTCEEEEEEECTTSS---EEEEE
T ss_pred CCcceEECCCCCEEEEecCCCcccccccccccceEEEEeCCCCeE-EEEEeCCCCccCcCeeECCCCC---EEEEE
Confidence 34679999999977653321 1 1233455566654 4554566678999999999998 66654
No 347
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=76.43 E-value=46 Score=30.39 Aligned_cols=99 Identities=13% Similarity=0.058 Sum_probs=52.4
Q ss_pred EEEeeCCCcc--EEEEcCCCCccEEEEEEccCCc---c-------cc-------cCceEEEEeCCC----CCEEEEEeCC
Q 019672 139 CAFSPSLNAC--FLAVPASTTKGSVLVYNVMELH---S-------HC-------EAPLAAIVLSSN----GMYIATASEQ 195 (337)
Q Consensus 139 ~~~~~~~~~~--~la~~~~~~dg~v~i~d~~~~~---~-------~~-------~~~i~~~~~s~d----g~~lat~s~d 195 (337)
.++++.|++. ++++. ..|.|++++..... . .. +.....|+|+|+ +.+.++-+.+
T Consensus 17 ~~~a~~pdG~~rl~V~e---r~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~ 93 (463)
T 2wg3_C 17 VGALHSGDGSQRLFILE---KEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN 93 (463)
T ss_dssp EEEECCSSSSCCEEEEE---TTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC
T ss_pred eEEEECCCCCeEEEEEe---CCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC
Confidence 4556666664 66554 36889998743211 0 00 235788999996 5555544321
Q ss_pred C-----------cEEEEEEcCC----------CceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCC
Q 019672 196 G-----------TIIRVFLVSE----------ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS 243 (337)
Q Consensus 196 g-----------~~i~vwd~~~----------~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d 243 (337)
. +.|.-|.+.. .+.+.++........-..|+|.|||. ++++.++.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~---LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGF---LYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSC---EEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCc---EEEEeCCC
Confidence 1 1122355532 12333332111122357899999998 55555543
No 348
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=73.65 E-value=8.6 Score=36.23 Aligned_cols=74 Identities=11% Similarity=0.044 Sum_probs=50.9
Q ss_pred CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCce-------------eEeeccCCcceeEEEEEeecCCCcccEEEEEe
Q 019672 175 APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATK-------------SYSFRRGTYPSTIFSLSFGQSMQFQDILVATS 241 (337)
Q Consensus 175 ~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~-------------~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s 241 (337)
.....+.++|||++++.++.-...+-|+|++.-.. ..+...|. . ....+|.++|. -..+--
T Consensus 323 ksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~Gl--G-PlHt~Fd~~G~---aYTtlf 396 (638)
T 3sbq_A 323 KNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGL--G-PLHTTFDGRGN---AYTTLF 396 (638)
T ss_dssp SSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCS--C-EEEEEECSSSE---EEEEET
T ss_pred CCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCC--c-ccEEEECCCCc---eEeeee
Confidence 44567889999999988775433367999874211 22222221 2 35579999997 677777
Q ss_pred CCCcEEEEecCCC
Q 019672 242 SSGSLHVFSPGFA 254 (337)
Q Consensus 242 ~dg~v~iw~l~~~ 254 (337)
-|..|--|+++..
T Consensus 397 idSqvvkWni~~a 409 (638)
T 3sbq_A 397 IDSQVVKWNMEEA 409 (638)
T ss_dssp TTTEEEEEEHHHH
T ss_pred ecceEEEEeccHH
Confidence 8999999999764
No 349
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=72.73 E-value=42 Score=28.27 Aligned_cols=181 Identities=9% Similarity=0.096 Sum_probs=85.9
Q ss_pred EEEEEcCCceEEEeCCCCcEEEEEee---CCEEEEEEccCCCEEEEEeCCCC---C--CCCCceEEEEECCCCCEEEEEE
Q 019672 21 GFALSTKDGFKIFDSSTGRLCYERAV---GAFSIVEMLYSSSLLAIVGAGEQ---P--SLSPRRLCLFNTTTGTALRELN 92 (337)
Q Consensus 21 ~la~g~~~g~~vw~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~g~~---~--~~~d~~v~iwd~~~~~~~~~~~ 92 (337)
.++.|+ ..+.+||..+.+-...... ........... +.+.+++|... . ......+..+|..+++....-.
T Consensus 18 i~~~GG-~~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~-~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~~~ 95 (318)
T 2woz_A 18 ILLVND-TAAVAYDPMENECYLTALAEQIPRNHSSIVTQQ-NQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGLPP 95 (318)
T ss_dssp EEEECS-SEEEEEETTTTEEEEEEECTTSCSSEEEEECSS-SCEEEEESSCC-------CCCBEEEEEETTTTEEEECSC
T ss_pred hhhccc-cceEEECCCCCceecccCCccCCccceEEEEEC-CEEEEECCcccCccccCCCccccEEEEeCCCCcEEECCC
Confidence 344454 4478999887753321111 11122233333 44444555210 0 0112348889998876543222
Q ss_pred cCC--ceeEEEEcCCeEEEEE--C-------CeEEEEECCCCeeeeeecCCCCC-ceEEEEeeCCCccEEEEcCCCC---
Q 019672 93 FLT--SILAVRLNKKRLVIVL--R-------EKTYIYDANTLAILDTIDTVPNL-KGLCAFSPSLNACFLAVPASTT--- 157 (337)
Q Consensus 93 ~~~--~v~~i~~~~~~~~v~~--d-------~~i~i~d~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~la~~~~~~--- 157 (337)
.+. .-.++....+.+++.+ + +.+.+||+.+.+-.. +...+.+ .+..+... ++.+++.+|...
T Consensus 96 ~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~-~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~ 172 (318)
T 2woz_A 96 LPSARCLFGLGEVDDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSE-VKNLPIKVYGHNVISH--NGMIYCLGGKTDDKK 172 (318)
T ss_dssp BSSCBCSCEEEEETTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEE-ECCCSSCEESCEEEEE--TTEEEEECCEESSSC
T ss_pred CCccccccceEEECCEEEEEcCccCCCCcccceEEEEeCCCCCEeE-CCCCCCcccccEEEEE--CCEEEEEcCCCCCCC
Confidence 222 1122233355565544 2 258889988764322 2111111 11122222 345666666311
Q ss_pred -ccEEEEEEccCCccc--cc-----CceEEEEeCCCCCEEEEEeCCCc----EEEEEEcCCCc
Q 019672 158 -KGSVLVYNVMELHSH--CE-----APLAAIVLSSNGMYIATASEQGT----IIRVFLVSEAT 208 (337)
Q Consensus 158 -dg~v~i~d~~~~~~~--~~-----~~i~~~~~s~dg~~lat~s~dg~----~i~vwd~~~~~ 208 (337)
...+.+||+.+.+-. .. ..-.++.+ +++.++.|+.++. .+.+||+.+.+
T Consensus 173 ~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 173 CTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp BCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 245889998765421 11 11223333 5677777765432 24678987765
No 350
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=72.11 E-value=9.1 Score=39.50 Aligned_cols=31 Identities=26% Similarity=0.242 Sum_probs=26.0
Q ss_pred EEEEEeecCCCcccEEEEEeCCCcEEEEecCCCc
Q 019672 222 IFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAI 255 (337)
Q Consensus 222 i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~ 255 (337)
+.+++..++.. ++.+-+.|+++|||++.++.
T Consensus 240 ~vs~~~~~~~~---~lftL~~D~~LRiWsl~t~~ 270 (1139)
T 4fhn_B 240 IISMIFLSTYN---VLVMLSLDYKLKVLDLSTNQ 270 (1139)
T ss_dssp BSCCEEETTTT---EEEEEBTTCEEEEEETTTTE
T ss_pred eEEeeccCCcc---EEEEEeCCCEEEEEECCCCC
Confidence 45666777887 99999999999999998764
No 351
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=71.87 E-value=49 Score=28.67 Aligned_cols=187 Identities=13% Similarity=0.088 Sum_probs=92.5
Q ss_pred EEEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCE--EEEEE----cCCceeEEEEcCC-----eEEEEEC------
Q 019672 50 SIVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTA--LRELN----FLTSILAVRLNKK-----RLVIVLR------ 112 (337)
Q Consensus 50 ~~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~--~~~~~----~~~~v~~i~~~~~-----~~~v~~d------ 112 (337)
..+.+.++.. ++++. .+++|.+++ .++. +..+. .......|+++++ .++++..
T Consensus 34 ~~ia~~pdG~--l~V~e------~~g~I~~i~--~g~~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 34 WALAFLPDGG--MLIAE------RPGRIRLFR--EGRLSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp EEEEECTTSC--EEEEE------TTTEEEEEE--TTEEEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred eEEEEcCCCe--EEEEe------CCCeEEEEE--CCCccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 3445555555 34443 257899988 3432 22221 1235788999987 6666652
Q ss_pred -CeEEEEECCCCe-----ee-eeecC-CCCCceEEEEeeCCCccEEEEcCCC-----------CccEEEEEEccCC----
Q 019672 113 -EKTYIYDANTLA-----IL-DTIDT-VPNLKGLCAFSPSLNACFLAVPAST-----------TKGSVLVYNVMEL---- 169 (337)
Q Consensus 113 -~~i~i~d~~~~~-----~~-~~~~~-~~~~~~~~~~~~~~~~~~la~~~~~-----------~dg~v~i~d~~~~---- 169 (337)
+.|..|++.... .+ ..+.. .........+.++|++.+.++.+.. ..|.|.-+|....
T Consensus 104 ~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h~~~~l~~~pdG~Lyv~~G~~~~~~~~~d~~~~~g~I~ri~~dG~~p~~ 183 (352)
T 2ism_A 104 RNQVVRLRHLGERGVLDRVVLDGIPARPHGLHSGGRIAFGPDGMLYVTTGEVYERELAQDLASLGGKILRLTPEGEPAPG 183 (352)
T ss_dssp EEEEEEEEECSSCEEEEEEEEEEECCCTTCCCCCCCEEECTTSCEEEECCCTTCGGGGGCTTCSSSEEEEECTTSSBCTT
T ss_pred ccEEEEEEeCCCCcCceEEEEEeCCCCCCCCcCCceEEECCCCCEEEEECCCCCCccccCCCCCceEEEEEcCCCCCCCC
Confidence 678888876431 11 11321 0111111244556677666665421 1256666665431
Q ss_pred ---------c-ccc-c--CceEEEEeCC-CCCEEEEEeCCCcE-----EEEEEcCCCc------------------eeEe
Q 019672 170 ---------H-SHC-E--APLAAIVLSS-NGMYIATASEQGTI-----IRVFLVSEAT------------------KSYS 212 (337)
Q Consensus 170 ---------~-~~~-~--~~i~~~~~s~-dg~~lat~s~dg~~-----i~vwd~~~~~------------------~~~~ 212 (337)
. ... . .....++|+| +|++.++-.....+ =+|.-+..|. .+..
T Consensus 184 npf~~~~~~~~~i~a~G~rnp~g~a~d~~~g~l~v~d~g~~~~~~~~~dei~~i~~G~nyGwp~~~g~~~~~~~~~p~~~ 263 (352)
T 2ism_A 184 NPFLGRRGARPEVYSLGHRNPQGLAWHPKTGELFSSEHGPSGEQGYGHDEVNLIVPGGNYGWPRVVGRGNDPRYRDPLYF 263 (352)
T ss_dssp CTTTTCTTSCTTEEEECCSEECCCEECTTTCCEEEEEECC------CCCEEEEECTTCBCCTTTCCSCCCCTTSCCCSEE
T ss_pred CcccCCCCCCccEEEEcCCCcccEEEECCCCCEEEEEcCCCCCCCCCCeEEEEeccCCcCCCCcccCCCCCCCCcCCeEe
Confidence 0 000 0 2357789999 67766554332220 0133333332 1111
Q ss_pred eccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCC
Q 019672 213 FRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGF 253 (337)
Q Consensus 213 ~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~ 253 (337)
+ .. ......++| .+|. ++++.-..+.|...+++.
T Consensus 264 ~--~~-~~ap~G~~~-~~G~---l~v~~~~~~~v~~v~~~~ 297 (352)
T 2ism_A 264 W--PQ-GFPPGNLAF-FRGD---LYVAGLRGQALLRLVLEG 297 (352)
T ss_dssp C--TT-CCCEEEEEE-ETTE---EEEEETTTTEEEEEEEEE
T ss_pred c--CC-CCCCcceEE-ECCE---EEEEECCCCEEEEEEECC
Confidence 1 11 112456778 4676 666666666777777653
No 352
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=71.61 E-value=45 Score=28.10 Aligned_cols=93 Identities=8% Similarity=0.083 Sum_probs=46.8
Q ss_pred ceEEEEECCCCCEEEEEEcCCce--eEEEEcCCeEEEEE--------CCeEEEEECCCCeeeeeecCCCCCce-EEEEee
Q 019672 75 RRLCLFNTTTGTALRELNFLTSI--LAVRLNKKRLVIVL--------REKTYIYDANTLAILDTIDTVPNLKG-LCAFSP 143 (337)
Q Consensus 75 ~~v~iwd~~~~~~~~~~~~~~~v--~~i~~~~~~~~v~~--------d~~i~i~d~~~~~~~~~~~~~~~~~~-~~~~~~ 143 (337)
+.+.++|+.+++-...-..+.+. .++....+.+++.+ -+.+.+||+.+.+-. .+...+.+.. ..+...
T Consensus 127 ~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~-~~~~~p~~r~~~~~~~~ 205 (318)
T 2woz_A 127 DSVLCYDPVAAKWSEVKNLPIKVYGHNVISHNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWK-DLAPMKTPRSMFGVAIH 205 (318)
T ss_dssp EEEEEEETTTTEEEEECCCSSCEESCEEEEETTEEEEECCEESSSCBCCCEEEEETTTTEEE-EECCCSSCCBSCEEEEE
T ss_pred ceEEEEeCCCCCEeECCCCCCcccccEEEEECCEEEEEcCCCCCCCccceEEEEcCCCCEEE-ECCCCCCCcccceEEEE
Confidence 57889999887654432222211 12223455565544 135899999876422 2211111111 122222
Q ss_pred CCCccEEEEcCCCCc---cEEEEEEccCCc
Q 019672 144 SLNACFLAVPASTTK---GSVLVYNVMELH 170 (337)
Q Consensus 144 ~~~~~~la~~~~~~d---g~v~i~d~~~~~ 170 (337)
++.+++++|...+ ..+.+||+.+.+
T Consensus 206 --~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 206 --KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp --TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred --CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 3456666653211 457788987654
No 353
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=70.75 E-value=50 Score=28.29 Aligned_cols=62 Identities=10% Similarity=-0.033 Sum_probs=32.0
Q ss_pred CCEEEEEeCCCCCCCCCceEEEEECCC--CCEEEEEEcC-C--ceeEEEEcCCeEEEEE-C-----------CeEEEEEC
Q 019672 58 SSLLAIVGAGEQPSLSPRRLCLFNTTT--GTALRELNFL-T--SILAVRLNKKRLVIVL-R-----------EKTYIYDA 120 (337)
Q Consensus 58 ~~~~~~~~~g~~~~~~d~~v~iwd~~~--~~~~~~~~~~-~--~v~~i~~~~~~~~v~~-d-----------~~i~i~d~ 120 (337)
.+.+.+++| ...+.+.++|+.+ ++....-..+ . .-.++....+.+++.+ . +.+.+||+
T Consensus 19 ~~~iyv~GG-----~~~~~~~~~d~~~~~~~W~~~~~~p~~~R~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~v~~yd~ 93 (357)
T 2uvk_A 19 NDTVYIGLG-----SAGTAWYKLDTQAKDKKWTALAAFPGGPRDQATSAFIDGNLYVFGGIGKNSEGLTQVFNDVHKYNP 93 (357)
T ss_dssp TTEEEEECG-----GGTTCEEEEETTSSSCCEEECCCCTTCCCBSCEEEEETTEEEEECCEEECTTSCEEECCCEEEEET
T ss_pred CCEEEEEeC-----cCCCeEEEEccccCCCCeeECCCCCCCcCccceEEEECCEEEEEcCCCCCCCccceeeccEEEEeC
Confidence 344545554 2356889999874 4433222222 1 1122233345555543 1 35889998
Q ss_pred CCCe
Q 019672 121 NTLA 124 (337)
Q Consensus 121 ~~~~ 124 (337)
.+.+
T Consensus 94 ~~~~ 97 (357)
T 2uvk_A 94 KTNS 97 (357)
T ss_dssp TTTE
T ss_pred CCCc
Confidence 8764
No 354
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=68.02 E-value=29 Score=32.68 Aligned_cols=62 Identities=11% Similarity=0.126 Sum_probs=40.5
Q ss_pred CceEEEEeCCCCCEEEEEeCC----------C-cEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEE
Q 019672 175 APLAAIVLSSNGMYIATASEQ----------G-TIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVAT 240 (337)
Q Consensus 175 ~~i~~~~~s~dg~~lat~s~d----------g-~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~ 240 (337)
.....|+|+++|.+.+..... + ..+..++..+|+.. .|-.+...++++.++||||++ .|.++
T Consensus 476 nsPDnL~fd~~G~LWf~TD~~~~~~g~~~~~gnn~v~~~dp~tGel~-~fl~~P~~aEpnGiafSPD~k---tLfV~ 548 (592)
T 4a9v_A 476 NSPDGLGFDKAGRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIR-RFMVGPIGCEVTGISFSPDQK---TLFVG 548 (592)
T ss_dssp CCEEEEEECTTCCEEEEECCCCCCSGGGTTCCSCEEEEECTTTCCEE-EEEECCTTCEEEEEEECTTSS---EEEEE
T ss_pred CCCCceEECCCCCEEEEeCCCcCccccccccCCceEEEEeCCCCeEE-EEEeCCCCccccCCEECCCCC---EEEEE
Confidence 557789999999977732211 1 12345566667653 343333346799999999999 77665
No 355
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=66.21 E-value=32 Score=33.37 Aligned_cols=37 Identities=16% Similarity=0.299 Sum_probs=29.1
Q ss_pred EEEEccCCCEEEEEeCCCCCCCCCceEEEEECCCCCEEEEEEcC
Q 019672 51 IVEMLYSSSLLAIVGAGEQPSLSPRRLCLFNTTTGTALRELNFL 94 (337)
Q Consensus 51 ~~~~~~~~~~~~~~~~g~~~~~~d~~v~iwd~~~~~~~~~~~~~ 94 (337)
+.++.++...++.++- |+++|+||+++++++.+....
T Consensus 224 Is~~~~~~~fLftL~~-------Dh~LRiWsL~t~~lv~t~DL~ 260 (729)
T 3f7f_A 224 ISCKLFHERYLIVLTQ-------NCHLKIWDLTSFTLIQDYDMV 260 (729)
T ss_dssp EEEEEETTTEEEEEET-------TCEEEEEETTTTEEEEEEETT
T ss_pred EEEeccCCcEEEEEEc-------CCeEEEEEcCCCceEEeeccc
Confidence 3444666777777765 999999999999999887763
No 356
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=66.21 E-value=16 Score=35.17 Aligned_cols=68 Identities=22% Similarity=0.315 Sum_probs=44.7
Q ss_pred EEEEe----CCCCC--EEEEEeCCCcEEEEEEcCCCc-------eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCC
Q 019672 178 AAIVL----SSNGM--YIATASEQGTIIRVFLVSEAT-------KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSG 244 (337)
Q Consensus 178 ~~~~~----s~dg~--~lat~s~dg~~i~vwd~~~~~-------~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg 244 (337)
+.|+. .++|+ .+..|.++|.+.|+.....+. .+.++.......+|..|.|+++.+ +|.+++.++
T Consensus 415 T~IaVd~v~~~~g~ytVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~---~LYV~t~~~ 491 (667)
T 4gz8_A 415 TQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ---QLYIGSTAG 491 (667)
T ss_dssp EEEEEEEEECSSCEEEEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTT---EEEEEBSSC
T ss_pred eEEEEEEEecCCCcEEEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCC---EEEEEECCE
Confidence 45555 34453 466889999988877554332 223332223345789999999998 999999998
Q ss_pred cEEE
Q 019672 245 SLHV 248 (337)
Q Consensus 245 ~v~i 248 (337)
.++|
T Consensus 492 V~kV 495 (667)
T 4gz8_A 492 VAQL 495 (667)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 6665
No 357
>3no0_A DNA gyrase subunit A; DNA topology, topoisomerase, C-terminal DO gyrase, DNA binding protein, isomerase; HET: DNA GOL; 1.30A {Aquifex aeolicus}
Probab=65.69 E-value=59 Score=27.23 Aligned_cols=146 Identities=15% Similarity=0.128 Sum_probs=80.1
Q ss_pred ccEEEEcCCCCccEEEEEEccCCc------c---cc-cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcC---C------C
Q 019672 147 ACFLAVPASTTKGSVLVYNVMELH------S---HC-EAPLAAIVLSSNGMYIATASEQGTIIRVFLVS---E------A 207 (337)
Q Consensus 147 ~~~la~~~~~~dg~v~i~d~~~~~------~---~~-~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~---~------~ 207 (337)
..++++.. .+|.|+-..+.... . +. ...+..+....+...|+..++.|.++ .++.. . |
T Consensus 80 ~~~~v~~T--~~G~iKr~~l~~~~~~~~G~~~i~lkegD~l~~~~~~~~~~~ill~T~~G~~~-r~~~~eip~~gR~a~G 156 (276)
T 3no0_A 80 GNRLLLAT--KKGYVKKIPLAEFEYKAQGMPIIKLTEGDEVVSIASSVDETHILLFTKKGRVA-RFSVREVPPSTPGARG 156 (276)
T ss_dssp CSEEEEEE--TTSEEEEEEGGGTTTCSTTEECSCCCTTCCEEEEEECCSSCEEEEEETTSEEE-EEEGGGSCBCCTTCCC
T ss_pred CCEEEEEe--CCCEEEEEEHHHhhhhcCCeEEEecCCCCEEEEEEEeCCCCEEEEEECCCEEE-EEEhhhCCCcCCCCCC
Confidence 34555555 48999998876542 0 01 14455555555556788889999864 45432 1 1
Q ss_pred ceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeecccccceee
Q 019672 208 TKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPADHHVL 287 (337)
Q Consensus 208 ~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~ 287 (337)
.....+.. ...|.++...+++. .|+..+..|.++...++.-....+..+ +... . . ..+. +
T Consensus 157 v~~i~L~~---~d~vv~~~~~~~~~---~ll~~T~~G~~kr~~~~e~~~~~R~gk--Gv~~-i-~---------~~~~-l 216 (276)
T 3no0_A 157 VQGIKLEK---NDETSGLRIWNGEP---YLLVITAKGRVKKISHEEIPKTNRGVK--GTEV-S-G---------TKDT-L 216 (276)
T ss_dssp EECCCCCT---TCCEEEEEEESSCS---EEEEEETTSCEEEEEGGGSCCCCTTCC--CEEC-C-C---------SSSC-E
T ss_pred EEEEccCC---CCEEEEEEEeCCCC---EEEEEeCCCcEEEeEHHHcccCCCCCc--ceEE-E-c---------CCCc-E
Confidence 12222221 23455555555566 899999999999998865443222110 1110 1 1 0111 1
Q ss_pred eeccCCCcccCEEEEEEeCCcEEE--EEEec
Q 019672 288 RNAFPAGVKRASVSVITYNGYFVE--YIFSI 316 (337)
Q Consensus 288 ~~~~~~~~~~~~l~~~~~dg~~~~--~~~~~ 316 (337)
+..... .+++.++..+.+|.+.. +..+.
T Consensus 217 v~~~~~-~~~~~i~~~t~~G~~ir~~~~~~~ 246 (276)
T 3no0_A 217 VDLIPI-KEEVELLITTKNGKAFYDKINQKD 246 (276)
T ss_dssp EEEEEE-SSEEEEEEEETTSCEEEEEEEGGG
T ss_pred EEEEEe-CCCCEEEEEcCCCeEEEeeeCHHH
Confidence 111111 13367999999999988 87643
No 358
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=64.41 E-value=16 Score=33.76 Aligned_cols=70 Identities=21% Similarity=0.310 Sum_probs=45.7
Q ss_pred ceEEEEeCC----CCC--EEEEEeCCCcEEEEEEcCCCc-------eeEeeccCCcceeEEEEEeecCCCcccEEEEEeC
Q 019672 176 PLAAIVLSS----NGM--YIATASEQGTIIRVFLVSEAT-------KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSS 242 (337)
Q Consensus 176 ~i~~~~~s~----dg~--~lat~s~dg~~i~vwd~~~~~-------~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~ 242 (337)
..++|+... ||+ .+..|.++|.+.|+.....+. .+.++.......+|..|.|+++.+ +|.+++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~---~Lyv~s~ 481 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQ---QLYIGST 481 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTT---EEEEEBS
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCC---EEEEEEC
Confidence 357776653 244 466789999988887654432 223333222245789999999998 9999999
Q ss_pred CCcEEE
Q 019672 243 SGSLHV 248 (337)
Q Consensus 243 dg~v~i 248 (337)
++.++|
T Consensus 482 ~~V~~v 487 (495)
T 1q47_A 482 AGVAQL 487 (495)
T ss_dssp SCEEEE
T ss_pred CeEEEE
Confidence 886665
No 359
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=60.29 E-value=85 Score=27.20 Aligned_cols=62 Identities=10% Similarity=0.094 Sum_probs=37.3
Q ss_pred CceEEEEeC-------CCCCEEEEEeCCCcEEEEEEcCCC-cee--EeeccCCcceeEEEEEeecCCCcccEEEEEe
Q 019672 175 APLAAIVLS-------SNGMYIATASEQGTIIRVFLVSEA-TKS--YSFRRGTYPSTIFSLSFGQSMQFQDILVATS 241 (337)
Q Consensus 175 ~~i~~~~~s-------~dg~~lat~s~dg~~i~vwd~~~~-~~~--~~~~~~~~~~~i~~l~fs~dg~~~~~las~s 241 (337)
.....++|. .+|+++++.-..+. |...++... +.. ..+..+ ....+..|++.|||. ++++..
T Consensus 259 ~ap~G~~~y~g~~fp~~~G~l~v~~~~~~~-v~~~~~~~~g~~~~~~~~~~~-~~~rp~~v~~~pDG~---lyv~~~ 330 (354)
T 3a9g_A 259 WAPSGASFVHGDMFPGLRGWLLIACLRGSM-LAAVNFGDNMEVRKISTFFKN-VFGRLRDVVIDDDGG---ILISTS 330 (354)
T ss_dssp CCEEEEEECCSSSCGGGTTEEEEEETTTTE-EEEEEECGGGCEEEEEEECTT-TSCCEEEEEECTTSC---EEEEEC
T ss_pred cCCcceEEECCCCCcccCCcEEEEEcCCCE-EEEEEECCCCcccceeeeccC-CCCCeeEEEECCCCc---EEEEEe
Confidence 346788883 57776666555454 566777643 221 233221 123588999999998 666654
No 360
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=60.13 E-value=1e+02 Score=28.05 Aligned_cols=99 Identities=11% Similarity=0.102 Sum_probs=53.4
Q ss_pred ceeEEEEcCCe---EEEEE-CCeEEEEECCCCe---eeeeecC--C-----CCCceEEEEeeCCC-----ccEEEEcCCC
Q 019672 96 SILAVRLNKKR---LVIVL-REKTYIYDANTLA---ILDTIDT--V-----PNLKGLCAFSPSLN-----ACFLAVPAST 156 (337)
Q Consensus 96 ~v~~i~~~~~~---~~v~~-d~~i~i~d~~~~~---~~~~~~~--~-----~~~~~~~~~~~~~~-----~~~la~~~~~ 156 (337)
...+|++.++. ++|+. .+.|++++..... .+..+.. . ....+++.++++|+ ..++++...
T Consensus 15 ~P~~~a~~pdG~~rl~V~er~G~i~~~~~~g~~~~~~~~~~~~~~~~g~~~~~e~Gllgia~~P~f~~n~~lYv~yt~~- 93 (463)
T 2wg3_C 15 QPVGALHSGDGSQRLFILEKEGYVKILTPEGEIFKEPYLDIHKLVQSGIKGGDERGLLSLAFHPNYKKNGKLYVSYTTN- 93 (463)
T ss_dssp SEEEEECCSSSSCCEEEEETTTEEEEECTTSCBCSSCSEECTTTBCCCCSSSCCCSEEEEEECTTHHHHCEEEEEEEEC-
T ss_pred CceEEEECCCCCeEEEEEeCCceEEEEeCCCCeeeeeecCCcceeccCccccCCCcceeeEeCCCCcCCCEEEEEEeCC-
Confidence 44577887775 66666 7889998753221 1112211 0 11356777888775 234443321
Q ss_pred Cc----------cEEEEEEccCC----------cccc-------cCceEEEEeCCCCCEEEEEeCC
Q 019672 157 TK----------GSVLVYNVMEL----------HSHC-------EAPLAAIVLSSNGMYIATASEQ 195 (337)
Q Consensus 157 ~d----------g~v~i~d~~~~----------~~~~-------~~~i~~~~~s~dg~~lat~s~d 195 (337)
.+ ..|.-|.+... +.+. .+.-..|+|.|||.+.++.++.
T Consensus 94 ~~~~~~~~~~~~~~v~r~~~~~~~~~~~d~~~~~~i~~~~~~~~~H~g~~l~fgpDG~LYv~~Gd~ 159 (463)
T 2wg3_C 94 QERWAIGPHDHILRVVEYTVSRKNPHQVDLRTARVFLEVAELHRKHLGGQLLFGPDGFLYIILGDG 159 (463)
T ss_dssp CCSSCSSSSCEEEEEEEEEBCTTCTTSBCGGGCEEEEEEEESSSSSCEEEEEECTTSCEEEEECCT
T ss_pred CCCcccCCcccceEEEEEEEcCCCCCccCCCCceEEEEcCCCCCcccCCcEeECCCCcEEEEeCCC
Confidence 11 13433554321 0110 1556889999999987776653
No 361
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=57.96 E-value=28 Score=22.25 Aligned_cols=32 Identities=19% Similarity=0.303 Sum_probs=23.9
Q ss_pred CEEEEEEeCCcEEEEEEecCCCCeeceEEeeeeeec
Q 019672 298 ASVSVITYNGYFVEYIFSINNCCESTWTLDREFNLL 333 (337)
Q Consensus 298 ~~l~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (337)
+...+.- +|+++||.+++++.+ +.+.++|--.
T Consensus 30 nhFgv~e-~g~iKIykyde~tNe---I~LkKE~~~d 61 (72)
T 3kvp_A 30 NHFGVME-DGYIKIYEYNESRNE---VKLKKEYADD 61 (72)
T ss_dssp TEEEEEE-TTEEEEEEEETTTTE---EEEEEEEECC
T ss_pred CEEEEEe-CCEEEEEEeCCCCCe---EEEEEeecCc
Confidence 4444444 999999999999987 6777776543
No 362
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=57.86 E-value=7.5 Score=40.13 Aligned_cols=38 Identities=11% Similarity=0.071 Sum_probs=31.5
Q ss_pred CceEEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEee
Q 019672 175 APLAAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSF 213 (337)
Q Consensus 175 ~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~ 213 (337)
..+.+++..++.++++|-+.|++ +||||+.+++++.+.
T Consensus 238 ~~~vs~~~~~~~~~lftL~~D~~-LRiWsl~t~~~v~t~ 275 (1139)
T 4fhn_B 238 NTIISMIFLSTYNVLVMLSLDYK-LKVLDLSTNQCVETI 275 (1139)
T ss_dssp TCBSCCEEETTTTEEEEEBTTCE-EEEEETTTTEEEEEE
T ss_pred ceeEEeeccCCccEEEEEeCCCE-EEEEECCCCCeEEee
Confidence 34556667788899999999998 699999999988764
No 363
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=51.80 E-value=84 Score=30.20 Aligned_cols=70 Identities=14% Similarity=0.198 Sum_probs=47.4
Q ss_pred ceEEEEeC----CCCC---EEEEEeCCCcEEEEEEcCCCcee-EeeccCCcceeEEEEEeecCC--CcccEEEEEeCCCc
Q 019672 176 PLAAIVLS----SNGM---YIATASEQGTIIRVFLVSEATKS-YSFRRGTYPSTIFSLSFGQSM--QFQDILVATSSSGS 245 (337)
Q Consensus 176 ~i~~~~~s----~dg~---~lat~s~dg~~i~vwd~~~~~~~-~~~~~~~~~~~i~~l~fs~dg--~~~~~las~s~dg~ 245 (337)
..++|+.+ ++|+ .+..|.++|.++|+-....+..+ .++..-....+|..|.++++. . +|.+++.++.
T Consensus 398 ~~T~iaVd~v~~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~ee~~~~~~~~pI~~l~l~~~~~~~---~Lyv~s~~~V 474 (663)
T 1olz_A 398 NYTQIVVDRTQALDGTVYDVMFVSTDRGALHKAISLEHAVHIIEETQLFQDFEPVQTLLLSSKKGNR---FVYAGSNSGV 474 (663)
T ss_dssp CEEEEEEEEEECTTSCEEEEEEEEETTSEEEEEEECSSSEEEEEEEECCTTCCCCCEEEECCSSSSC---EEEEECSSCE
T ss_pred ceEEEEEEEEeccCCCceEEEEEEcCCcEEEEEEecCCCceEEEEecccCCCCcceeeEeccCCCcc---EEEEEEcCeE
Confidence 35677763 4554 67789999998888766554332 222221123568899999987 7 8999999887
Q ss_pred EEE
Q 019672 246 LHV 248 (337)
Q Consensus 246 v~i 248 (337)
++|
T Consensus 475 ~~v 477 (663)
T 1olz_A 475 VQA 477 (663)
T ss_dssp EEE
T ss_pred EEE
Confidence 766
No 364
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=48.89 E-value=1.2e+02 Score=25.58 Aligned_cols=178 Identities=8% Similarity=0.042 Sum_probs=93.2
Q ss_pred EccCCCEEEEEeCCCCC-------CCCCceEEEEECCCCCEEEEEEcCCceeEEEEcCCeEEEEE---CC--eEEEEECC
Q 019672 54 MLYSSSLLAIVGAGEQP-------SLSPRRLCLFNTTTGTALRELNFLTSILAVRLNKKRLVIVL---RE--KTYIYDAN 121 (337)
Q Consensus 54 ~~~~~~~~~~~~~g~~~-------~~~d~~v~iwd~~~~~~~~~~~~~~~v~~i~~~~~~~~v~~---d~--~i~i~d~~ 121 (337)
+....+.+.++.....+ ......|+..++..++...-. ......+.+..+.++.+. ++ .|+..++.
T Consensus 60 i~~~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~~~~l~--~~~~~~~s~~g~~Iy~~~~~~~~~~~Iy~~~~d 137 (302)
T 3s25_A 60 INADKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHGSTVLD--PDPCIYASLIGNYIYYLHYDTQTATSLYRIRID 137 (302)
T ss_dssp EEECSSEEEEEEECC------CCSSCCSEEEEEEETTSCCCEEEE--CSCEEEEEEETTEEEEEEESSSSCEEEEEEETT
T ss_pred EEEcCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCcceEee--cCCccEEEEeCCEEEEEeecCCCCceEEEEECC
Confidence 34567777777642100 001457788888776533322 233345666777777765 33 56666665
Q ss_pred CCeeeeeecCCCCCceEEEEeeCCCccEEEEcCCCCccEEEEEEccCCcc--cccCceEEEEeCCCCCEEEEEeCC-CcE
Q 019672 122 TLAILDTIDTVPNLKGLCAFSPSLNACFLAVPASTTKGSVLVYNVMELHS--HCEAPLAAIVLSSNGMYIATASEQ-GTI 198 (337)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~la~~~~~~dg~v~i~d~~~~~~--~~~~~i~~~~~s~dg~~lat~s~d-g~~ 198 (337)
... ...+..... . ..++++..|...+. ...+|.+.++..... +..++.. ..++|+|.+|+-.... +..
T Consensus 138 Gs~-~~~lt~~~~----~--~~~~~g~~iy~t~~-g~~~Iy~~~l~g~~~~~l~~~~~~-~~~~P~g~~iy~t~~~~~~~ 208 (302)
T 3s25_A 138 GEE-KKKIKNHYL----F--TCNTSDRYFYYNNP-KNGQLYRYDTASQSEALFYDCNCY-KPVVLDDTNVYYMDVNRDNA 208 (302)
T ss_dssp SCC-CEEEESSCC----C--CSEEETTEEEEECT-TTCCEEEEETTTTEEEEEECSCEE-EEEEEETTEEEEEEGGGTTE
T ss_pred CCC-eEEEeCCCc----e--EeeEECCEEEEEeC-CCceEEEEECCCCCEEEEeCCCcc-ceeeecCCEEEEEEcCCCcE
Confidence 433 223322211 1 23445557776653 357788888765432 2223333 3466999988876543 222
Q ss_pred EEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCC--CcEEEEecC
Q 019672 199 IRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSS--GSLHVFSPG 252 (337)
Q Consensus 199 i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~d--g~v~iw~l~ 252 (337)
|..-++..+. ...+.. ..+ ..|+|++. +|.-++.. +.|..-+++
T Consensus 209 I~~~~ldG~~-~~~Lt~----~~~--~~~~~~g~---~Iy~~~~~~~~~i~~~~~D 254 (302)
T 3s25_A 209 IVHVNINNPN-PVVLTE----ANI--EHYNVYGS---LIFYQRGGDNPALCVVKND 254 (302)
T ss_dssp EEEECSSSCC-CEECSC----SCE--EEEEEETT---EEEEEECSSSCEEEEEETT
T ss_pred EEEEECCCCC-eEEEeC----CCc--ceEEECCC---EEEEEECCCCcEEEEEECC
Confidence 4444555443 233322 123 24788888 77655433 344444443
No 365
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=48.50 E-value=1.3e+02 Score=25.88 Aligned_cols=69 Identities=14% Similarity=0.145 Sum_probs=39.6
Q ss_pred ceEEEEeCC-------CCCEEEEEeCCCcEEEEEEcCCCceeEe--eccCCcceeEEEEEeecCCCcccEEEEEe-CCCc
Q 019672 176 PLAAIVLSS-------NGMYIATASEQGTIIRVFLVSEATKSYS--FRRGTYPSTIFSLSFGQSMQFQDILVATS-SSGS 245 (337)
Q Consensus 176 ~i~~~~~s~-------dg~~lat~s~dg~~i~vwd~~~~~~~~~--~~~~~~~~~i~~l~fs~dg~~~~~las~s-~dg~ 245 (337)
....++|.+ +|+++++.-..+. |...++..++.... +-.. ....+..|++.|||. ++++.. .+|
T Consensus 272 ap~G~~~y~g~~fp~~~g~l~v~~~~~~~-v~~~~~~~~~~~~~~~~~~~-~~~rp~~v~~~pdG~---lyv~td~~~g- 345 (353)
T 2g8s_A 272 AVSGMAFYNSDKFPQWQQKLFIGALKDKD-VIVMSVNGDKVTEDGRILTD-RGQRIRDVRTGPDGY---LYVLTDESSG- 345 (353)
T ss_dssp CEEEEEEECCSSSGGGTTEEEEEETTTTE-EEEEEEETTEEEEEEEESGG-GCCCEEEEEECTTSC---EEEEECSTTE-
T ss_pred CcceeEEECCccCcccCCcEEEEEccCCE-EEEEEeCCCeEeeeEEcccC-CCCceeEEEECCCCc---EEEEEeCCCC-
Confidence 456777753 4666665555554 55667766543322 2111 123588999999998 555433 344
Q ss_pred EEEEec
Q 019672 246 LHVFSP 251 (337)
Q Consensus 246 v~iw~l 251 (337)
+||.+
T Consensus 346 -~I~ri 350 (353)
T 2g8s_A 346 -ELLKV 350 (353)
T ss_dssp -EEEEE
T ss_pred -EEEEE
Confidence 45554
No 366
>3uc1_A DNA gyrase subunit A; DNA binding protein, topoisomerase, isomerase; HET: DNA; 1.65A {Mycobacterium tuberculosis}
Probab=47.79 E-value=1.3e+02 Score=25.76 Aligned_cols=150 Identities=19% Similarity=0.214 Sum_probs=79.8
Q ss_pred CccEEEEcCCCCccEEEEEEccCCcccc-----------cCceEEEEeCCCCCEEEEEeCCCcEEEEEEcC--C------
Q 019672 146 NACFLAVPASTTKGSVLVYNVMELHSHC-----------EAPLAAIVLSSNGMYIATASEQGTIIRVFLVS--E------ 206 (337)
Q Consensus 146 ~~~~la~~~~~~dg~v~i~d~~~~~~~~-----------~~~i~~~~~s~dg~~lat~s~dg~~i~vwd~~--~------ 206 (337)
+..++++.. ..|.|+--.+....... ...+..+........|+..+..|.++ .+... .
T Consensus 108 ~e~~~v~~T--~~G~iKr~~l~~~~~~~r~G~~~i~lke~D~lv~~~~~~~~d~ill~T~~G~~~-rf~~~~~eip~~gr 184 (327)
T 3uc1_A 108 DAPYLVLAT--RNGLVKKSKLTDFDSNRSGGIVAVNLRDNDELVGAVLCSAGDDLLLVSANGQSI-RFSATDEALRPMGR 184 (327)
T ss_dssp SSSEEEEEE--TTSEEEEEEGGGGCCCCSSCEESCBCCTTCCEEEEEEECTTCEEEEEETTSEEE-EEECCTTTSCCCCT
T ss_pred CCCEEEEEc--CCCEEEEeEHHHhhccccCceEEEEECCCCEEEEEEEecCCCEEEEEECCCeEE-EEECcccccCcCCc
Confidence 455565555 48999998765422111 13444444444456788888999865 45544 1
Q ss_pred ---CceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccCCCCcccccccccccccceeeccccc
Q 019672 207 ---ATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQRRGGRTSSILGSILPESVNEVLDPAD 283 (337)
Q Consensus 207 ---~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~ 283 (337)
|..+..+. ....|.++..-+++. +|+..+..|.++.-.+..-....+.. .+.....+.+. .
T Consensus 185 ~a~Gv~~i~L~---~~d~Vv~~~~~~~~~---~ll~~T~~G~~Krt~l~e~~~~~R~~--~G~~~~~l~~~--------~ 248 (327)
T 3uc1_A 185 ATSGVQGMRFN---IDDRLLSLNVVREGT---YLLVATSGGYAKRTAIEEYPVQGRGG--KGVLTVMYDRR--------R 248 (327)
T ss_dssp TSBCEESSCCC---TTCCEEEEEECCTTC---EEEEEETTSEEEEEEGGGSCBCCTTS--CCEESSCCCTT--------T
T ss_pred CCCCeeeecCC---CCCEEEEEEEECCCC---EEEEEeCCCcEEEEEHHHccccCcCC--CcEEEEEecCC--------C
Confidence 11111221 123466665555566 89999999999998876544322110 11111111100 0
Q ss_pred ceeeeeccCCCcccCEEEEEEeCCcEEEEEEec
Q 019672 284 HHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 284 ~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~ 316 (337)
+. ++.... ..+.+.|+..+.+|.+..|..+.
T Consensus 249 d~-lv~~~~-~~~~~~i~l~T~~G~~ir~~~~~ 279 (327)
T 3uc1_A 249 GR-LVGALI-VDDDSELYAVTSGGGVIRTAARQ 279 (327)
T ss_dssp CS-EEEEEE-ECTTCEEEEEEGGGCEEEEEGGG
T ss_pred Ce-EEEEEE-eCCCccEEEEcCCCeEEEEehhh
Confidence 01 111111 11236799999999999887643
No 367
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=45.86 E-value=50 Score=31.18 Aligned_cols=59 Identities=17% Similarity=0.143 Sum_probs=40.1
Q ss_pred EEEEEeCCCcEEEEEEcCCC----c-eeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEE
Q 019672 188 YIATASEQGTIIRVFLVSEA----T-KSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVF 249 (337)
Q Consensus 188 ~lat~s~dg~~i~vwd~~~~----~-~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw 249 (337)
.+..|+++|++.|+.....+ . .+.++..-....+|..|.++++.+ .|.+++.++.++|-
T Consensus 382 VlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~---~LyV~s~~~V~qVP 445 (590)
T 3nvq_A 382 VLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERR---KLYVSSQWEVSQVP 445 (590)
T ss_dssp EEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTT---EEEEECSSEEEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCC---EEEEEecceEEEcc
Confidence 56678899998887765544 1 122232111245689999999988 89999998776664
No 368
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=40.78 E-value=2.6e+02 Score=27.01 Aligned_cols=232 Identities=15% Similarity=0.218 Sum_probs=115.7
Q ss_pred EEEE-EcCCCCEEEEEcC-Cc-----eEEEeCCCCcEEEEE-e-eC-C-------EEEEEEccCCCEEEEEeC---CCCC
Q 019672 11 FFVS-FNQDNSGFALSTK-DG-----FKIFDSSTGRLCYER-A-VG-A-------FSIVEMLYSSSLLAIVGA---GEQP 70 (337)
Q Consensus 11 ~~~~-fs~dg~~la~g~~-~g-----~~vw~~~~~~~~~~~-~-~~-~-------~~~~~~~~~~~~~~~~~~---g~~~ 70 (337)
..++ ++||+++++.+-+ +| ++++|+++++.+-.. . .. . ...+++. +.+.+.+... +...
T Consensus 132 ~g~~~~~~~~~~~~~~ls~~G~d~~~~~~~d~~t~~~~~~~~~~~~k~~~~~~~~~~~~~W~-d~~~~~~~~~~~~~~~~ 210 (711)
T 4hvt_A 132 RGVSNCFQNPNRYLISMSFGGKDEMFFREWDLEKKDFVKNGFEPITNSGKLLEGKFTYPTWI-NKDTIIFNLVLHKNEIT 210 (711)
T ss_dssp EEEEECSSSTTEEEEEEEETTCSEEEEEEEETTTTEECTTCSCCBCTTCCBCCEETCCEEEE-ETTEEEECCCCSTTCBC
T ss_pred eceeecCCCCCEEEEEeCCCCCceeEEEEEECCcCCcCCCCcccccccccccccccceeeEE-CCCEEEEEeCCCCCCcC
Confidence 4455 8999998776533 22 589999999765211 1 00 0 0222333 3344433321 1000
Q ss_pred -CCCCceEEEEECCCCCEE--EEEEcCC-ce-eEEEE--cCCe----EEEEE-----CCeEEEEECCC--CeeeeeecCC
Q 019672 71 -SLSPRRLCLFNTTTGTAL--RELNFLT-SI-LAVRL--NKKR----LVIVL-----REKTYIYDANT--LAILDTIDTV 132 (337)
Q Consensus 71 -~~~d~~v~iwd~~~~~~~--~~~~~~~-~v-~~i~~--~~~~----~~v~~-----d~~i~i~d~~~--~~~~~~~~~~ 132 (337)
.....+|+.|.+-+.... .-+.... .+ ..... ++.. +++.. ...+++.|... ++ +..+..+
T Consensus 211 ~~~~~~~v~~~~~Gt~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~-~~~l~~~ 289 (711)
T 4hvt_A 211 SSLYPNSLYIWKRGESIEKAKKLFEVPKEYIYVSAGKLLSDTISSSLIFISANKDFYNYDNYILDTKYKNLK-LQKINMP 289 (711)
T ss_dssp TTSSBCEEEEEETTSCGGGCEEEEECCTTSCEEEEEESSCTTTCSSEEEEEEESSSSCEEEEEEECSSSSCE-EEECCSC
T ss_pred cCCCCCEEEEEECCCChHHCeEEeccCCCceEEEEEEecCCCceEEEEEEEEecccCceeEEEEcCCCCCCc-ceEeecC
Confidence 112478999987665321 1222222 22 22222 2332 33332 23567777653 32 2334333
Q ss_pred CCCceEEEEeeCCCccEEEEcCCC--------CccEEEEEEccCCc------c-----c-cc--CceEEEEeCCCCCEEE
Q 019672 133 PNLKGLCAFSPSLNACFLAVPAST--------TKGSVLVYNVMELH------S-----H-CE--APLAAIVLSSNGMYIA 190 (337)
Q Consensus 133 ~~~~~~~~~~~~~~~~~la~~~~~--------~dg~v~i~d~~~~~------~-----~-~~--~~i~~~~~s~dg~~la 190 (337)
.. ..+.. ..++.+++....+ ..+.|.+.|+.+.. . + +. ..+..+.+..+ .+++
T Consensus 290 ~~-~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~l~~ 364 (711)
T 4hvt_A 290 SD-ATLQG---SFKEYVFWLLRSDWKFKSHNIKAGSLVALHFTDLLKTESDKTSLKILFTPTANEVFNFISTTKD-RVFL 364 (711)
T ss_dssp TT-CEEEE---EETTEEEEECSSCEEETTEEECTTCEEEEEGGGGGSCGGGCTTCEEEECCCTTEEEEEEEECSS-CEEE
T ss_pred Cc-ceEee---eECCEEEEEECcccccccccCCCCeEEEEECCcccccccccccceEEECCCCCCeEEEEEEECC-EEEE
Confidence 22 12211 1233444433211 25678889987642 1 1 11 45788899876 6778
Q ss_pred EEeCCCcE-EEEEEcCCCc-eeEe-eccCCcceeEEEEEeecCCCcccEEEEEeCC---CcEEEEecC
Q 019672 191 TASEQGTI-IRVFLVSEAT-KSYS-FRRGTYPSTIFSLSFGQSMQFQDILVATSSS---GSLHVFSPG 252 (337)
Q Consensus 191 t~s~dg~~-i~vwd~~~~~-~~~~-~~~~~~~~~i~~l~fs~dg~~~~~las~s~d---g~v~iw~l~ 252 (337)
+...+|.. ++++|+.+++ .+.. +... ....+....+++++. .++++.+.. +.+..+|+.
T Consensus 365 ~~~~~~~~~l~~~~~~~g~~~~~~~i~lp-~~~~~~~~~~~~~~~--~~~~~~ss~~~P~~~~~~d~~ 429 (711)
T 4hvt_A 365 ATYDNVVAKVVTFTLENEQWTKPVVLKLP-YQNAIFGMSSYEEEE--EALITIENSIVPPTIYLWVKT 429 (711)
T ss_dssp EEEETTEEEEEEECEETTEECCCEEECCC-STTCEEEEECCTTCS--CEEEEEECSSSCCEEEEECTT
T ss_pred EEEECCEEEEEEEECCCCceEEEeccCCC-CCeEEEEEeecCcCC--EEEEEEecCCCCCEEEEEeCC
Confidence 88877742 4677776664 2222 2211 123466666777776 255555544 457777765
No 369
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=37.57 E-value=57 Score=30.48 Aligned_cols=68 Identities=12% Similarity=0.088 Sum_probs=42.4
Q ss_pred eEEEEeCCCCC--EEEEEeCCCcEEEEEEcCCC----ceeEeeccCCcceeEE-EEEeecCCCcccEEEEEeCCCcEEE
Q 019672 177 LAAIVLSSNGM--YIATASEQGTIIRVFLVSEA----TKSYSFRRGTYPSTIF-SLSFGQSMQFQDILVATSSSGSLHV 248 (337)
Q Consensus 177 i~~~~~s~dg~--~lat~s~dg~~i~vwd~~~~----~~~~~~~~~~~~~~i~-~l~fs~dg~~~~~las~s~dg~v~i 248 (337)
+++|+....+. .+..|.++|.++||- +..+ ..+.++.......+|. .|.+++++. +|.+++.++.++|
T Consensus 402 lT~vav~~~~~~tV~flGT~~G~l~KV~-l~~~~~~~~~~e~~~v~~~~~pv~~~l~~~~~~~---~Lyv~s~~~V~kv 476 (539)
T 3al9_A 402 LTSVASYVYNGYSVVFVGTKSGKLKKIR-ADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQL---YLYVMSERQVTRV 476 (539)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEE-EEETTTEEEEEEEEECCTTCCCCCSCCEECTTSS---EEEEECSSEEEEE
T ss_pred eEEEEeeccCCeEEEEEEcCCCeEEEEE-eCCCCccceeEEEEEeecCCCccccceEEccCCC---eEEEEecccccee
Confidence 45555554333 566789999987763 3322 1233332222234675 899999988 9999998865555
No 370
>1zvt_A Topoisomerase IV subunit A; beta-pinwheel, ATPase, supercoiling, decatenation, DNA bindi topology; 1.70A {Escherichia coli}
Probab=31.16 E-value=2.2e+02 Score=23.35 Aligned_cols=113 Identities=14% Similarity=0.062 Sum_probs=58.5
Q ss_pred CCEEEEEeCCCcEEEE--EEcCCC----ceeEe-eccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecCCCcccC
Q 019672 186 GMYIATASEQGTIIRV--FLVSEA----TKSYS-FRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPGFAINQR 258 (337)
Q Consensus 186 g~~lat~s~dg~~i~v--wd~~~~----~~~~~-~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~~~~~~~ 258 (337)
...|+..+..|.++++ +++..+ ..+.. +... ....|.++....++. +|+..+..|.++...+..-...+
T Consensus 44 ~~~ll~~T~~Gr~~~~~~~elp~~r~~G~~i~~~i~L~-~~e~Iv~~~~~~~~~---~lll~T~~G~~Kr~~~~e~~~~~ 119 (256)
T 1zvt_A 44 NQPVVFVDSTGRSYAIDPITLPSARGQGEPLTGKLTLP-PGATVDHMLMESDDQ---KLLMASDAGYGFVCTFNDLVARN 119 (256)
T ss_dssp TSCEEEEETTSEEEEECGGGSCCSSSCCEEGGGTCCCC-TTCCEEEEECCCTTC---EEEEEBTTSEEEEEEGGGGCCCS
T ss_pred CCEEEEEeCCCeEEEEEHHHCCCcCCCCeEeeeeecCC-CCCEEEEEEEeCCCC---EEEEEeCCCeEEEeEHHHhcccC
Confidence 3456666788876443 455322 22111 1111 123466664434555 78899999999999986543322
Q ss_pred CCCcccccccccccccceeecccccceeeeeccCCCcccCEEEEEEeCCcEEEEEEec
Q 019672 259 RGGRTSSILGSILPESVNEVLDPADHHVLRNAFPAGVKRASVSVITYNGYFVEYIFSI 316 (337)
Q Consensus 259 ~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~l~~~~~dg~~~~~~~~~ 316 (337)
+. +.....+.+. ..++.......+++.|+..+.+|.+..|..+.
T Consensus 120 r~----G~~~i~L~~~----------d~lv~~~~~~~~~~~i~l~T~~G~~lrf~~~e 163 (256)
T 1zvt_A 120 RA----GKALITLPEN----------AHVMPPVVIEDASDMLLAITQAGRMLMFPVSD 163 (256)
T ss_dssp TT----CEECBCCCTT----------CCBCCCEECCCTTCEEEEEETTSEEEEEEGGG
T ss_pred cC----ceEEEEECCC----------CEEEEEEEecCCCCEEEEEcCCCeEEEEEHHH
Confidence 10 1011111110 01111111111236799999999999998743
No 371
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=28.47 E-value=86 Score=29.16 Aligned_cols=69 Identities=22% Similarity=0.263 Sum_probs=43.8
Q ss_pred eEEEEeCC-CC-CEEEEEeCCCcEEEEEEcCCCc--eeEeeccCCcceeE-EEEEeecCCCcccEEEEEeCCCcEEEE
Q 019672 177 LAAIVLSS-NG-MYIATASEQGTIIRVFLVSEAT--KSYSFRRGTYPSTI-FSLSFGQSMQFQDILVATSSSGSLHVF 249 (337)
Q Consensus 177 i~~~~~s~-dg-~~lat~s~dg~~i~vwd~~~~~--~~~~~~~~~~~~~i-~~l~fs~dg~~~~~las~s~dg~v~iw 249 (337)
.++|+... +| ..+..|+++|++.|+....++. .+.++.. ....+| ..|.++++.. +|.+++.++.++|-
T Consensus 389 lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~v-~~~~pi~~~l~l~~~~~---~Lyv~s~~~V~~vp 462 (528)
T 3ol2_B 389 LTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQSI-QQGSAVSRDLTFDGTFE---HLYVMTQSTLLKVP 462 (528)
T ss_dssp EEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEES-STTSCCCSCCEECTTSS---EEEEECSSCEEEEE
T ss_pred eEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeecc-CCCCcceeeEEEecCCC---EEEEEeCCEEEEEE
Confidence 55666543 22 2455788999987776553322 2333332 223457 4899999988 89999999877764
No 372
>3mez_B Mannose-specific lectin 3 chain 2; heterotetramer, sugar binding protein; 1.94A {Crocus vernus} SCOP: b.78.1.0
Probab=27.63 E-value=1.6e+02 Score=20.59 Aligned_cols=58 Identities=16% Similarity=0.255 Sum_probs=33.1
Q ss_pred EEEEeCCCCCEEEEEeCCCcEEEEEEcCCCceeEeeccCCcceeEEEEEeecCCCcccEEEEEeCCCcEEEEecC
Q 019672 178 AAIVLSSNGMYIATASEQGTIIRVFLVSEATKSYSFRRGTYPSTIFSLSFGQSMQFQDILVATSSSGSLHVFSPG 252 (337)
Q Consensus 178 ~~~~~s~dg~~lat~s~dg~~i~vwd~~~~~~~~~~~~~~~~~~i~~l~fs~dg~~~~~las~s~dg~v~iw~l~ 252 (337)
..+.+..||++++.....++ + +|...+... + . -..+.+..+|. +++. ..++.+ +|...
T Consensus 26 ~~L~~q~dGNLvL~~~~~~~-~-vWssnt~~~------~--~--~~~l~l~~dGN---LVl~-d~~~~~-iW~S~ 83 (113)
T 3mez_B 26 YSLVMRDDCNLVLTKGSKTN-I-VWESGTSGR------G--Q--HCFMRLGHSGE---LDIT-DDRLNT-VFVSN 83 (113)
T ss_dssp EEEEECTTSCEEEEETTTTE-E-EEECCCTTS------C--S--SCEEEECTTSC---EEEE-CTTSCE-EEECS
T ss_pred EEEEEcCCCEEEEEECCCCE-E-EEECCcccC------C--c--CEEEEEeCCCc---EEEE-CCCCCE-EEECC
Confidence 45667788887776432344 3 788654321 1 1 12467888998 4443 445554 78754
No 373
>3oky_B Putative uncharacterized protein; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okw_A* 3afc_A* 3al8_A*
Probab=21.86 E-value=2.2e+02 Score=26.69 Aligned_cols=70 Identities=16% Similarity=0.184 Sum_probs=44.9
Q ss_pred eEEEEeCC----CC--CEEEEEeCCCcEEEEEEcCCC------c-eeEeecc---------CCcceeEEEEEeecCCCcc
Q 019672 177 LAAIVLSS----NG--MYIATASEQGTIIRVFLVSEA------T-KSYSFRR---------GTYPSTIFSLSFGQSMQFQ 234 (337)
Q Consensus 177 i~~~~~s~----dg--~~lat~s~dg~~i~vwd~~~~------~-~~~~~~~---------~~~~~~i~~l~fs~dg~~~ 234 (337)
.+.|+++. ++ ..+..|+++|.+.|+...... . .+.++.. +....+|..|.++++.+
T Consensus 405 lT~IaVd~~~g~~~~ytVlFLGTd~G~l~Kvv~~~~~~~~~~~~~~iEEi~vf~~~~~~~~~~~~~pI~~L~ls~~~~-- 482 (565)
T 3oky_B 405 LTKIAVDNAAGPYQNHTVVFLGSEKGIILKFLARIGSSGFLNGSLFLEEMNVYNPEKCSYDGVEDKRIMGMQLDRASG-- 482 (565)
T ss_dssp EEEEEEEEEETTTTCEEEEEEEETTSEEEEEEECC-----CCCCEEEEEEECCCHHHHCBTTBCCCCCCEEEEEGGGT--
T ss_pred eEEEEEEEEecCCCceEEEEEECCCCeEEEEEecCCCCccccccEEEEEEEEeccccccccccCCCceEEEEEcCCCC--
Confidence 47777764 23 356679999997777654321 1 2222211 11134688999999988
Q ss_pred cEEEEEeCCCcEEEE
Q 019672 235 DILVATSSSGSLHVF 249 (337)
Q Consensus 235 ~~las~s~dg~v~iw 249 (337)
.|.+++.++.++|-
T Consensus 483 -~LYV~s~~~V~qVP 496 (565)
T 3oky_B 483 -SLYVAFSTCVIKVP 496 (565)
T ss_dssp -EEEEECSSCEEEEE
T ss_pred -EEEEEecCeEEEee
Confidence 89999999877764
No 374
>3oky_A Plexin-A2; transmembrane, ligand, SEMA-domain, cell-CELL signalling, SI protein; HET: NAG; 2.19A {Mus musculus} PDB: 3okt_A* 4gza_A
Probab=21.63 E-value=1.2e+02 Score=29.26 Aligned_cols=69 Identities=10% Similarity=0.010 Sum_probs=41.6
Q ss_pred EEEEeCCCC--CEEEEEeCCCcEEEEEEcCCC--c-eeEeeccCCcceeE-EEEEeecCCCcccEEEEEeCCCcEEEE
Q 019672 178 AAIVLSSNG--MYIATASEQGTIIRVFLVSEA--T-KSYSFRRGTYPSTI-FSLSFGQSMQFQDILVATSSSGSLHVF 249 (337)
Q Consensus 178 ~~~~~s~dg--~~lat~s~dg~~i~vwd~~~~--~-~~~~~~~~~~~~~i-~~l~fs~dg~~~~~las~s~dg~v~iw 249 (337)
++|+....+ ..+..|+++|++.|+.-.... . .+.++.......+| ..|.++++.. +|.+++.++.++|-
T Consensus 402 T~VaV~~~~~~tVlFLGT~~G~l~Kv~~~~~~~~~~~~ee~~v~~~~~pI~~~l~l~~~~~---~Lyv~s~~~V~qvP 476 (681)
T 3oky_A 402 TSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHGGVQYEMVSVFKDGSPILRDMAFSINQL---YLYVMSERQVTRVP 476 (681)
T ss_dssp CCCEEEEETTEEEEEEEBTTSEEEEEECCCTTTCCEEEEEEECCTTCCCCCSCCEECTTSS---EEEEECSSEEEEEE
T ss_pred EEEEEEecCceEEEEEECCCceEEEEEECCCCCceEEEEEeeeccCCCceeeeeEEcCCCC---EEEEEecCEEEEEE
Confidence 444444322 346678899987776543322 1 23333222123455 6899999888 89999988777663
Done!