Query 019673
Match_columns 337
No_of_seqs 162 out of 1232
Neff 8.0
Searched_HMMs 46136
Date Fri Mar 29 03:38:04 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019673.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019673hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN03156 GDSL esterase/lipase; 100.0 3.2E-70 6.9E-75 522.0 30.9 296 25-336 22-325 (351)
2 cd01837 SGNH_plant_lipase_like 100.0 2.1E-65 4.6E-70 484.0 27.9 286 31-336 1-294 (315)
3 cd01847 Triacylglycerol_lipase 100.0 2.4E-53 5.1E-58 395.5 21.5 255 30-336 1-260 (281)
4 PRK15381 pathogenicity island 100.0 6.3E-53 1.4E-57 405.7 24.0 236 27-336 139-380 (408)
5 cd01846 fatty_acyltransferase_ 100.0 1.7E-48 3.7E-53 360.3 22.1 248 32-336 1-250 (270)
6 COG3240 Phospholipase/lecithin 100.0 1.4E-32 3.1E-37 255.5 13.5 275 25-336 24-312 (370)
7 PF00657 Lipase_GDSL: GDSL-lik 99.8 4.4E-20 9.5E-25 165.0 15.4 209 33-296 1-219 (234)
8 cd01832 SGNH_hydrolase_like_1 98.6 5.5E-07 1.2E-11 77.9 12.1 155 32-282 1-156 (185)
9 cd01839 SGNH_arylesterase_like 98.6 1.5E-06 3.3E-11 76.9 13.6 174 32-282 1-180 (208)
10 cd01836 FeeA_FeeB_like SGNH_hy 98.4 3.6E-06 7.8E-11 73.3 12.6 95 160-282 67-162 (191)
11 cd01823 SEST_like SEST_like. A 98.4 5.2E-06 1.1E-10 76.0 13.6 197 32-282 2-216 (259)
12 cd04501 SGNH_hydrolase_like_4 98.4 1.1E-05 2.4E-10 69.7 13.5 94 160-285 59-152 (183)
13 cd01844 SGNH_hydrolase_like_6 98.2 3.9E-05 8.4E-10 66.2 14.4 147 32-281 1-148 (177)
14 cd01838 Isoamyl_acetate_hydrol 98.2 1.9E-05 4.2E-10 68.6 12.5 104 160-283 63-168 (199)
15 PRK10528 multifunctional acyl- 98.1 3.5E-05 7.6E-10 67.6 11.6 107 28-219 8-114 (191)
16 cd01827 sialate_O-acetylestera 98.1 6.7E-05 1.4E-09 65.0 13.2 157 32-282 2-159 (188)
17 cd01830 XynE_like SGNH_hydrola 98.1 6.8E-05 1.5E-09 66.2 13.5 57 161-226 75-131 (204)
18 cd01821 Rhamnogalacturan_acety 98.1 9.7E-05 2.1E-09 64.8 13.3 97 160-286 65-161 (198)
19 PF13472 Lipase_GDSL_2: GDSL-l 98.1 7.4E-05 1.6E-09 62.9 12.0 95 160-283 61-155 (179)
20 cd01834 SGNH_hydrolase_like_2 98.0 7.5E-05 1.6E-09 64.4 11.4 102 161-288 62-164 (191)
21 cd04506 SGNH_hydrolase_YpmR_li 98.0 9.2E-05 2E-09 65.1 12.0 106 160-283 68-175 (204)
22 cd01825 SGNH_hydrolase_peri1 S 97.9 4.5E-05 9.8E-10 65.9 8.6 92 161-283 57-149 (189)
23 cd01822 Lysophospholipase_L1_l 97.8 0.00057 1.2E-08 58.3 13.6 46 160-222 64-109 (177)
24 cd01824 Phospholipase_B_like P 97.8 0.0013 2.8E-08 61.6 16.9 150 107-286 83-248 (288)
25 cd01820 PAF_acetylesterase_lik 97.8 0.00041 8.8E-09 61.8 12.6 88 160-282 89-177 (214)
26 cd01835 SGNH_hydrolase_like_3 97.6 0.0011 2.4E-08 57.7 12.6 93 160-283 69-161 (193)
27 cd01831 Endoglucanase_E_like E 97.4 0.0023 5.1E-08 54.6 11.9 48 162-223 57-105 (169)
28 cd01841 NnaC_like NnaC (CMP-Ne 97.2 0.004 8.7E-08 53.1 10.1 91 160-283 51-142 (174)
29 cd01828 sialate_O-acetylestera 97.0 0.0055 1.2E-07 52.0 9.6 86 160-282 48-135 (169)
30 cd01833 XynB_like SGNH_hydrola 96.9 0.007 1.5E-07 50.7 9.5 91 160-283 40-131 (157)
31 cd04502 SGNH_hydrolase_like_7 96.9 0.022 4.7E-07 48.5 12.3 89 160-284 50-139 (171)
32 KOG3035 Isoamyl acetate-hydrol 96.9 0.025 5.4E-07 50.0 12.2 118 160-296 68-189 (245)
33 cd01829 SGNH_hydrolase_peri2 S 96.7 0.017 3.7E-07 50.3 10.2 96 160-282 59-154 (200)
34 PF14606 Lipase_GDSL_3: GDSL-l 96.7 0.015 3.2E-07 50.3 9.3 141 75-294 20-167 (178)
35 cd00229 SGNH_hydrolase SGNH_hy 96.4 0.036 7.8E-07 45.9 10.0 96 159-284 64-160 (187)
36 KOG3670 Phospholipase [Lipid t 96.2 0.074 1.6E-06 51.1 11.7 89 108-221 149-237 (397)
37 cd01826 acyloxyacyl_hydrolase_ 96.0 0.067 1.4E-06 50.1 10.4 124 161-295 123-278 (305)
38 COG2755 TesA Lysophospholipase 95.0 0.37 8E-06 42.5 11.4 14 161-174 78-91 (216)
39 cd01840 SGNH_hydrolase_yrhL_li 90.5 1.1 2.4E-05 37.2 7.1 15 160-174 50-64 (150)
40 KOG4079 Putative mitochondrial 84.6 0.58 1.3E-05 38.3 1.7 45 279-336 118-165 (169)
41 PLN02757 sirohydrochlorine fer 79.2 6.2 0.00013 33.4 6.1 64 202-287 60-126 (154)
42 COG3240 Phospholipase/lecithin 75.9 3.6 7.8E-05 39.5 4.1 71 158-234 96-166 (370)
43 PRK13384 delta-aminolevulinic 70.8 11 0.00024 35.5 5.9 63 198-277 59-121 (322)
44 PF02633 Creatininase: Creatin 70.5 18 0.00038 32.7 7.2 84 165-284 61-144 (237)
45 cd00384 ALAD_PBGS Porphobilino 70.3 13 0.00029 34.9 6.4 64 197-277 48-111 (314)
46 cd04824 eu_ALAD_PBGS_cysteine_ 67.4 7.8 0.00017 36.5 4.2 65 198-277 49-114 (320)
47 PRK09283 delta-aminolevulinic 65.9 18 0.00038 34.3 6.3 64 197-277 56-119 (323)
48 cd04823 ALAD_PBGS_aspartate_ri 64.8 18 0.00039 34.2 6.0 65 197-277 51-116 (320)
49 PF00490 ALAD: Delta-aminolevu 64.4 17 0.00038 34.3 5.9 64 199-277 56-119 (324)
50 PF01903 CbiX: CbiX; InterPro 63.1 4.7 0.0001 31.2 1.7 51 204-277 41-92 (105)
51 cd03416 CbiX_SirB_N Sirohydroc 62.2 16 0.00034 28.0 4.5 51 204-276 48-98 (101)
52 COG2845 Uncharacterized protei 56.8 1.6E+02 0.0034 28.2 10.6 82 160-264 177-261 (354)
53 cd03414 CbiX_SirB_C Sirohydroc 53.1 47 0.001 26.0 6.0 50 202-275 47-96 (117)
54 PF08885 GSCFA: GSCFA family; 50.6 50 0.0011 30.3 6.4 85 195-290 147-231 (251)
55 cd03412 CbiK_N Anaerobic cobal 49.8 43 0.00093 27.1 5.3 51 200-275 56-106 (127)
56 COG0113 HemB Delta-aminolevuli 48.0 34 0.00074 32.2 4.9 66 197-277 58-123 (330)
57 KOG2794 Delta-aminolevulinic a 47.4 25 0.00055 32.4 3.8 94 160-278 39-132 (340)
58 COG3581 Uncharacterized protei 46.2 38 0.00082 33.0 5.0 47 208-278 327-373 (420)
59 cd00419 Ferrochelatase_C Ferro 39.2 1.7E+02 0.0037 23.9 7.4 35 203-250 80-114 (135)
60 PF08331 DUF1730: Domain of un 38.6 64 0.0014 23.7 4.3 65 212-276 9-77 (78)
61 COG0646 MetH Methionine syntha 38.6 72 0.0016 30.0 5.5 109 195-316 138-297 (311)
62 PF08029 HisG_C: HisG, C-termi 36.9 29 0.00063 25.5 2.2 20 203-222 53-72 (75)
63 TIGR03455 HisG_C-term ATP phos 35.0 49 0.0011 25.7 3.3 23 200-222 74-96 (100)
64 PRK13717 conjugal transfer pro 34.8 74 0.0016 25.9 4.3 27 242-268 70-96 (128)
65 PRK09121 5-methyltetrahydropte 34.5 1.5E+02 0.0033 28.3 7.3 55 190-257 146-200 (339)
66 TIGR01091 upp uracil phosphori 33.7 1.2E+02 0.0026 26.7 6.0 50 199-279 135-184 (207)
67 COG1209 RfbA dTDP-glucose pyro 28.1 2.3E+02 0.0049 26.5 6.8 81 205-296 37-147 (286)
68 PF06908 DUF1273: Protein of u 28.1 1.5E+02 0.0033 25.5 5.5 28 194-221 23-50 (177)
69 cd04236 AAK_NAGS-Urea AAK_NAGS 26.9 2.2E+02 0.0048 26.3 6.8 63 133-224 16-78 (271)
70 PRK13660 hypothetical protein; 26.8 4.1E+02 0.0088 23.1 7.9 27 195-221 24-50 (182)
71 PRK06520 5-methyltetrahydropte 26.2 1E+02 0.0023 29.8 4.7 36 190-226 160-195 (368)
72 TIGR02744 TrbI_Ftype type-F co 25.9 1.4E+02 0.003 23.9 4.4 27 242-268 57-83 (112)
73 cd03311 CIMS_C_terminal_like C 25.7 2.3E+02 0.005 26.6 6.9 37 190-227 145-181 (332)
74 PRK07807 inosine 5-monophospha 25.4 1E+02 0.0023 31.0 4.6 60 200-286 226-287 (479)
75 PRK00129 upp uracil phosphorib 25.1 2.1E+02 0.0045 25.2 6.1 49 199-278 137-185 (209)
76 PF02896 PEP-utilizers_C: PEP- 25.0 1.1E+02 0.0023 28.8 4.3 18 160-177 195-212 (293)
77 PRK06233 hypothetical protein; 24.4 1.2E+02 0.0026 29.4 4.7 35 190-225 161-195 (372)
78 PRK12454 carbamate kinase-like 20.9 6.7E+02 0.014 23.8 8.8 52 163-224 4-55 (313)
79 cd03413 CbiK_C Anaerobic cobal 20.4 1.2E+02 0.0025 23.7 3.1 18 203-220 45-62 (103)
80 KOG0907 Thioredoxin [Posttrans 20.1 1.4E+02 0.003 23.4 3.4 37 256-296 39-75 (106)
No 1
>PLN03156 GDSL esterase/lipase; Provisional
Probab=100.00 E-value=3.2e-70 Score=521.97 Aligned_cols=296 Identities=34% Similarity=0.613 Sum_probs=254.4
Q ss_pred cccCCCCEEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCC-CCCCCCCCCCCCCC
Q 019673 25 QAAEAARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGS-EPTLPYLSPELTGS 103 (337)
Q Consensus 25 ~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl-~~~~Pyl~~~~~~~ 103 (337)
+.++.+++|||||||++|+||++++.+..++++||||++||+++|+||||||++|+||||+.||+ |.+||||++...+.
T Consensus 22 ~~~~~~~aifvFGDSl~D~GN~~~l~~~~~~~~~pyG~~f~~~~ptGRfSnGr~~~D~iA~~lGl~p~~ppyl~~~~~~~ 101 (351)
T PLN03156 22 ETCAKVPAIIVFGDSSVDAGNNNQISTVAKSNFEPYGRDFPGGRPTGRFCNGRIAPDFISEAFGLKPAIPAYLDPSYNIS 101 (351)
T ss_pred cccCCCCEEEEecCcCccCCCccccccccccCCCCCCCCCCCCCCCccccCCChhhhhHHHHhCCCCCCCCCcCcccCch
Confidence 45677999999999999999998776655678999999998778999999999999999999999 77888998765566
Q ss_pred ccccccceeecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCC
Q 019673 104 RLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYS 183 (337)
Q Consensus 104 ~~~~G~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~ 183 (337)
++.+|+|||+||+++++.+.. ....++|..||++|+++++++....|.+++++..+++||+||||+|||+..|+.. .
T Consensus 102 ~~~~GvNFA~agag~~~~~~~-~~~~~~l~~Qv~~F~~~~~~l~~~~g~~~~~~~~~~sL~~i~iG~NDy~~~~~~~--~ 178 (351)
T PLN03156 102 DFATGVCFASAGTGYDNATSD-VLSVIPLWKELEYYKEYQTKLRAYLGEEKANEIISEALYLISIGTNDFLENYYTF--P 178 (351)
T ss_pred hhcccceeecCCccccCCCcc-ccCccCHHHHHHHHHHHHHHHHHhhChHHHHHHHhcCeEEEEecchhHHHHhhcc--c
Confidence 789999999999998765532 2235789999999999988887766765666778999999999999998655421 1
Q ss_pred CcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcC-CCCCcHHHHHHHHHHHHHHHHHHHHH
Q 019673 184 ARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRG-RNGQCAADLQRAADLYNPQLVQLVKD 262 (337)
Q Consensus 184 ~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~-~~~~c~~~~n~~~~~~N~~L~~~l~~ 262 (337)
.+......+++++.+++.+.+.|++||++|||||+|+|+||+||+|..+.... +..+|.+.+|.+++.||++|++++++
T Consensus 179 ~~~~~~~~~~~~~~lv~~~~~~i~~Ly~~GAR~~~V~~lpplGc~P~~~~~~~~~~~~C~~~~n~~~~~~N~~L~~~l~~ 258 (351)
T PLN03156 179 GRRSQYTVSQYQDFLIGIAENFVKKLYRLGARKISLGGLPPMGCLPLERTTNLMGGSECVEEYNDVALEFNGKLEKLVTK 258 (351)
T ss_pred cccccCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEecCCCccccCHHHHhhcCCCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 12222356789999999999999999999999999999999999999775431 34589999999999999999999999
Q ss_pred HHhhcCCceEEEEeccHHHHHHHHCcccCCCcCCccccccccccccCCCcccCC----CCCCcCCCC-CCcc-CCCcccc
Q 019673 263 LNSQYGSEIFVAVNTGKMQYNFISNPRAFGMLTNPFFMYGLFKEKIIGDSCCSN----KSIIFTLVL-NLFV-RILRGFK 336 (337)
Q Consensus 263 l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~~~~~~~~~~~~~aCcg~----~~~~C~~~~-~~C~-p~~Y~f~ 336 (337)
|++++|+++|+++|+|++++++++||++|||+++ +++|||. ....|+... .+|+ |++|+||
T Consensus 259 L~~~~pg~~i~~~D~y~~~~~ii~nP~~yGf~~~-------------~~aCCg~g~~~~~~~C~~~~~~~C~~p~~yvfW 325 (351)
T PLN03156 259 LNKELPGIKLVFSNPYDIFMQIIRNPSAYGFEVT-------------SVACCATGMFEMGYLCNRNNPFTCSDADKYVFW 325 (351)
T ss_pred HHHhCCCCeEEEEehHHHHHHHHhCccccCcccC-------------CccccCCCCCCCccccCCCCCCccCCccceEEe
Confidence 9999999999999999999999999999999999 9999985 346798665 5899 9999999
No 2
>cd01837 SGNH_plant_lipase_like SGNH_plant_lipase_like, a plant specific subfamily of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=100.00 E-value=2.1e-65 Score=483.95 Aligned_cols=286 Identities=42% Similarity=0.784 Sum_probs=245.2
Q ss_pred CEEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCC-CCCCCCCCCCCCcccccc
Q 019673 31 RAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEP-TLPYLSPELTGSRLLVGA 109 (337)
Q Consensus 31 ~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~-~~Pyl~~~~~~~~~~~G~ 109 (337)
++||+||||++|+||..++.+..+++.||||++||. +|+||||||++|+||||+.||++. .|||+.... +.++.+|+
T Consensus 1 ~al~vFGDS~sD~Gn~~~~~~~~~~~~~PyG~~~~~-~p~GRfSnG~~~~d~la~~lgl~~~~p~~~~~~~-~~~~~~G~ 78 (315)
T cd01837 1 PALFVFGDSLVDTGNNNYLPTLAKANFPPYGIDFPG-RPTGRFSNGRLIIDFIAEALGLPLLPPPYLSPNG-SSDFLTGV 78 (315)
T ss_pred CcEEEecCccccCCCccccccccccCCCCCcCcCCC-CCCccccCCchhhhhhhhhccCCCCCCCccCccc-cchhhccc
Confidence 479999999999999977655444678999999974 899999999999999999999997 455776432 25678899
Q ss_pred ceeecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCCCC
Q 019673 110 NFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQF 189 (337)
Q Consensus 110 NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~ 189 (337)
|||+|||++++.+.. ....++|..||++|++++++++..+|++++++..+++||+||||+|||+..+.. ......
T Consensus 79 NfA~gGA~~~~~~~~-~~~~~~l~~Qv~~F~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~----~~~~~~ 153 (315)
T cd01837 79 NFASGGAGILDSTGF-LGSVISLSVQLEYFKEYKERLRALVGEEAAADILSKSLFLISIGSNDYLNNYFA----NPTRQY 153 (315)
T ss_pred eecccCCccccCCcc-eeeeecHHHHHHHHHHHHHHHHHhhCHHHHHHHHhCCEEEEEecccccHHHHhc----CccccC
Confidence 999999999876542 234679999999999999888877787666778899999999999999865532 111023
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcC-CCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019673 190 SLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRG-RNGQCAADLQRAADLYNPQLVQLVKDLNSQYG 268 (337)
Q Consensus 190 ~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~-~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p 268 (337)
+..++++.+++++.++|++||++|||||+|+|+||+||+|.++.... +..+|.+.+|++++.||++|+++|++|++++|
T Consensus 154 ~~~~~~~~~v~~i~~~v~~L~~~GAr~~~v~~lpplgc~P~~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~~ 233 (315)
T cd01837 154 EVEAYVPFLVSNISSAIKRLYDLGARKFVVPGLGPLGCLPSQRTLFGGDGGGCLEELNELARLFNAKLKKLLAELRRELP 233 (315)
T ss_pred CHHHHHHHHHHHHHHHHHHHHhCCCcEEEecCCCCcCccHHHHhhcCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 56789999999999999999999999999999999999999887642 34689999999999999999999999999999
Q ss_pred CceEEEEeccHHHHHHHHCcccCCCcCCccccccccccccCCCcccCC----CCCCcCCC-CCCcc-CCCcccc
Q 019673 269 SEIFVAVNTGKMQYNFISNPRAFGMLTNPFFMYGLFKEKIIGDSCCSN----KSIIFTLV-LNLFV-RILRGFK 336 (337)
Q Consensus 269 ~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~~~~~~~~~~~~~aCcg~----~~~~C~~~-~~~C~-p~~Y~f~ 336 (337)
+++|+++|+|++++++++||++|||+++ +++||+. ....|+.. ..+|+ |++|+||
T Consensus 234 ~~~i~~~D~y~~~~~i~~np~~yGf~~~-------------~~aCc~~g~~~~~~~c~~~~~~~C~~p~~y~fw 294 (315)
T cd01837 234 GAKFVYADIYNALLDLIQNPAKYGFENT-------------LKACCGTGGPEGGLLCNPCGSTVCPDPSKYVFW 294 (315)
T ss_pred CcEEEEEehhHHHHHHHhChhhcCCcCC-------------CcCccCCCCCCcccccCCCCCCcCCCccceEEe
Confidence 9999999999999999999999999999 9999986 34577754 46899 9999999
No 3
>cd01847 Triacylglycerol_lipase_like Triacylglycerol lipase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Members of this subfamily might hydrolyze triacylglycerol into diacylglycerol and fatty acid anions.
Probab=100.00 E-value=2.4e-53 Score=395.53 Aligned_cols=255 Identities=19% Similarity=0.206 Sum_probs=205.7
Q ss_pred CCEEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCcccccc
Q 019673 30 ARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGA 109 (337)
Q Consensus 30 ~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~ 109 (337)
|++||||||||+|+||++++. + + ++|+||||||++++|++++.+|++.. +++ ...+..+|+
T Consensus 1 ~~~i~vFGDSl~D~Gn~~~~~--------~----~--~~~~gRFsnG~~~~d~~~~~~~~~~~---~~~--~~~~~~~G~ 61 (281)
T cd01847 1 FSRVVVFGDSLSDVGTYNRAG--------V----G--AAGGGRFTVNDGSIWSLGVAEGYGLT---TGT--ATPTTPGGT 61 (281)
T ss_pred CCceEEecCcccccCCCCccc--------c----C--CCCCcceecCCcchHHHHHHHHcCCC---cCc--CcccCCCCc
Confidence 579999999999999987542 1 1 24799999999999999999998753 221 234567899
Q ss_pred ceeecccccccCCCcc--cccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCC
Q 019673 110 NFASAGIGILNDTGIQ--FVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSR 187 (337)
Q Consensus 110 NfA~gGA~~~~~~~~~--~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~ 187 (337)
|||+|||++.+.+... ....++|.+||++|++.+. ...+++||+||||+|||+..+.... .....
T Consensus 62 NfA~gGa~~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~------------~~~~~sL~~i~iG~ND~~~~~~~~~-~~~~~ 128 (281)
T cd01847 62 NYAQGGARVGDTNNGNGAGAVLPSVTTQIANYLAAGG------------GFDPNALYTVWIGGNDLIAALAALT-TATTT 128 (281)
T ss_pred eeeccCccccCCCCccccccCCCCHHHHHHHHHHhcC------------CCCCCeEEEEecChhHHHHHHhhcc-ccccc
Confidence 9999999998754321 0235799999999987531 2368999999999999996553311 00111
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019673 188 QFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQY 267 (337)
Q Consensus 188 ~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~ 267 (337)
.....++++.+++++.++|++|+++|||+|+|+++||+||+|.++... ..|.+.+|++++.||++|+++|++|+++
T Consensus 129 ~~~~~~~~~~~~~~~~~~v~~L~~~GAr~ilv~~lpplgc~P~~~~~~---~~~~~~~n~~~~~~N~~L~~~l~~l~~~- 204 (281)
T cd01847 129 QAAAVAAAATAAADLASQVKNLLDAGARYILVPNLPDVSYTPEAAGTP---AAAAALASALSQTYNQTLQSGLNQLGAN- 204 (281)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcccCcchhhcc---chhHHHHHHHHHHHHHHHHHHHHhccCC-
Confidence 234578999999999999999999999999999999999999887653 3688999999999999999999998754
Q ss_pred CCceEEEEeccHHHHHHHHCcccCCCcCCccccccccccccCCCcccCC-CCCCcCCCC-CCcc-CCCcccc
Q 019673 268 GSEIFVAVNTGKMQYNFISNPRAFGMLTNPFFMYGLFKEKIIGDSCCSN-KSIIFTLVL-NLFV-RILRGFK 336 (337)
Q Consensus 268 p~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~~~~~~~~~~~~~aCcg~-~~~~C~~~~-~~C~-p~~Y~f~ 336 (337)
+|+++|+|.++++|++||++|||+++ +++||+. ....|+... .+|+ |++|+||
T Consensus 205 ---~i~~~D~~~~~~~i~~nP~~yGf~~~-------------~~~CC~~~~~~~~~~~~~~~c~~~~~y~fw 260 (281)
T cd01847 205 ---NIIYVDTATLLKEVVANPAAYGFTNT-------------TTPACTSTSAAGSGAATLVTAAAQSTYLFA 260 (281)
T ss_pred ---eEEEEEHHHHHHHHHhChHhcCccCC-------------CccccCCCCccccccccccCCCCccceeec
Confidence 89999999999999999999999999 9999985 333465333 4899 9999999
No 4
>PRK15381 pathogenicity island 2 effector protein SseJ; Provisional
Probab=100.00 E-value=6.3e-53 Score=405.70 Aligned_cols=236 Identities=21% Similarity=0.257 Sum_probs=195.6
Q ss_pred cCCCCEEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCccc
Q 019673 27 AEAARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLL 106 (337)
Q Consensus 27 ~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~ 106 (337)
...|++||+|||||||+||+.+..+. ...||||.+| +||||||++|+|||| .+||++ .
T Consensus 139 ~~~~~ai~vFGDSlsDtGnn~y~~t~--~~~PPyG~~f-----tGRFSNG~v~~DfLA-------~~pyl~--------~ 196 (408)
T PRK15381 139 LGDITRLVFFGDSLSDSLGRMFEKTH--HILPSYGQYF-----GGRFTNGFTWTEFLS-------SPHFLG--------K 196 (408)
T ss_pred cCCCCeEEEeCCccccCCCccccccc--cCCCCCCCCC-----CcccCCCchhhheec-------cccccC--------C
Confidence 47899999999999999887665433 3579999987 899999999999999 346764 1
Q ss_pred cccceeecccccccCCCcc-c-ccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCC
Q 019673 107 VGANFASAGIGILNDTGIQ-F-VNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSA 184 (337)
Q Consensus 107 ~G~NfA~gGA~~~~~~~~~-~-~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~ 184 (337)
+|+|||+|||+++...... . ...++|..||++|+. .+++||+||+|+|||+. +.
T Consensus 197 ~G~NFA~GGA~~~t~~~~~~~~~~~~~L~~Qv~~~~~-----------------~~~aL~lV~iG~NDy~~-~~------ 252 (408)
T PRK15381 197 EMLNFAEGGSTSASYSCFNCIGDFVSNTDRQVASYTP-----------------SHQDLAIFLLGANDYMT-LH------ 252 (408)
T ss_pred CCceEeecccccccccccccccCccCCHHHHHHHHHh-----------------cCCcEEEEEeccchHHH-hH------
Confidence 6899999999987321110 0 124689999998653 15899999999999972 31
Q ss_pred cCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 019673 185 RSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLN 264 (337)
Q Consensus 185 ~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~ 264 (337)
.++++.+++++.++|++||++|||||+|+|+||+||+|..+.. ...+.+|.+++.||++|+++|++|+
T Consensus 253 -------~~~v~~vV~~~~~~l~~Ly~lGARk~vV~nlpPlGC~P~~~~~-----~~~~~~N~~a~~fN~~L~~~L~~L~ 320 (408)
T PRK15381 253 -------KDNVIMVVEQQIDDIEKIISGGVNNVLVMGIPDLSLTPYGKHS-----DEKRKLKDESIAHNALLKTNVEELK 320 (408)
T ss_pred -------HHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCcchhhcc-----CchHHHHHHHHHHHHHHHHHHHHHH
Confidence 2357889999999999999999999999999999999987743 2357899999999999999999999
Q ss_pred hhcCCceEEEEeccHHHHHHHHCcccCCCcCCccccccccccccCCCcccCCC----CCCcCCCCCCccCCCcccc
Q 019673 265 SQYGSEIFVAVNTGKMQYNFISNPRAFGMLTNPFFMYGLFKEKIIGDSCCSNK----SIIFTLVLNLFVRILRGFK 336 (337)
Q Consensus 265 ~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~~~~~~~~~~~~~aCcg~~----~~~C~~~~~~C~p~~Y~f~ 336 (337)
+++|+++|+++|+|+++.++++||++|||+++ +. ||+.+ ...|.+...+|. +|+||
T Consensus 321 ~~~pg~~ivy~D~y~~~~~ii~nP~~yGF~~~-------------~~-cCg~G~~~~~~~C~p~~~~C~--~YvFW 380 (408)
T PRK15381 321 EKYPQHKICYYETADAFKVIMEAASNIGYDTE-------------NP-YTHHGYVHVPGAKDPQLDICP--QYVFN 380 (408)
T ss_pred HhCCCCEEEEEEhHHHHHHHHhCHHhcCCCcc-------------cc-ccCCCccCCccccCcccCCCC--ceEec
Confidence 99999999999999999999999999999999 54 99863 345766555674 99998
No 5
>cd01846 fatty_acyltransferase_like Fatty acyltransferase-like subfamily of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Might catalyze fatty acid transfer between phosphatidylcholine and sterols.
Probab=100.00 E-value=1.7e-48 Score=360.32 Aligned_cols=248 Identities=26% Similarity=0.310 Sum_probs=203.2
Q ss_pred EEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCccccccce
Q 019673 32 AFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANF 111 (337)
Q Consensus 32 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~Nf 111 (337)
++|+|||||+|+||..++... ..+|.+..| |+||||||++|+|+||+.+|++. ..+|+||
T Consensus 1 ~l~vFGDS~sD~Gn~~~~~~~---~~~~~~~~~----~~grfsnG~~w~d~la~~lg~~~-------------~~~~~N~ 60 (270)
T cd01846 1 RLVVFGDSLSDTGNIFKLTGG---SNPPPSPPY----FGGRFSNGPVWVEYLAATLGLSG-------------LKQGYNY 60 (270)
T ss_pred CeEEeeCccccCCcchhhcCC---CCCCCCCCC----CCCccCCchhHHHHHHHHhCCCc-------------cCCccee
Confidence 589999999999998654321 123333334 68999999999999999999863 2458999
Q ss_pred eecccccccCCCcc-cccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCCCCC
Q 019673 112 ASAGIGILNDTGIQ-FVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFS 190 (337)
Q Consensus 112 A~gGA~~~~~~~~~-~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~ 190 (337)
|+|||++.+..... .....++..||++|++.+++ +..+++|++|++|+||+...+.. ...
T Consensus 61 A~~Ga~~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~-----------~~~~~~l~~i~~G~ND~~~~~~~--------~~~ 121 (270)
T cd01846 61 AVGGATAGAYNVPPYPPTLPGLSDQVAAFLAAHKL-----------RLPPDTLVAIWIGANDLLNALDL--------PQN 121 (270)
T ss_pred EecccccCCcccCCCCCCCCCHHHHHHHHHHhccC-----------CCCCCcEEEEEeccchhhhhccc--------ccc
Confidence 99999987654321 12357999999999986431 34578999999999999853321 123
Q ss_pred hhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 019673 191 LPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSE 270 (337)
Q Consensus 191 ~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~ 270 (337)
....++++++++.+.|++|+++|+|+|+|+++||++|+|..+.... ...+.++.+++.||++|++++++|++++|++
T Consensus 122 ~~~~~~~~~~~~~~~i~~l~~~g~~~i~v~~~p~~~~~P~~~~~~~---~~~~~~~~~~~~~N~~L~~~l~~l~~~~~~~ 198 (270)
T cd01846 122 PDTLVTRAVDNLFQALQRLYAAGARNFLVLNLPDLGLTPAFQAQGD---AVAARATALTAAYNAKLAEKLAELKAQHPGV 198 (270)
T ss_pred ccccHHHHHHHHHHHHHHHHHCCCCEEEEeCCCCCCCCcccccCCc---ccHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 3467889999999999999999999999999999999999886542 1126899999999999999999999999999
Q ss_pred eEEEEeccHHHHHHHHCcccCCCcCCccccccccccccCCCcccCCCCCCcCCCCCCcc-CCCcccc
Q 019673 271 IFVAVNTGKMQYNFISNPRAFGMLTNPFFMYGLFKEKIIGDSCCSNKSIIFTLVLNLFV-RILRGFK 336 (337)
Q Consensus 271 ~i~~~D~~~~~~~ii~nP~~yGf~~~~~~~~~~~~~~~~~~aCcg~~~~~C~~~~~~C~-p~~Y~f~ 336 (337)
+|+++|+|++++++++||++|||+++ +++||+... |.....+|+ |++|+||
T Consensus 199 ~i~~~D~~~~~~~~~~~p~~yGf~~~-------------~~~C~~~~~--~~~~~~~c~~~~~y~fw 250 (270)
T cd01846 199 NILLFDTNALFNDILDNPAAYGFTNV-------------TDPCLDYVY--SYSPREACANPDKYLFW 250 (270)
T ss_pred eEEEEEhHHHHHHHHhCHHhcCCCcC-------------cchhcCCCc--cccccCCCCCccceEEe
Confidence 99999999999999999999999999 999998632 776667999 9999998
No 6
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=100.00 E-value=1.4e-32 Score=255.54 Aligned_cols=275 Identities=20% Similarity=0.250 Sum_probs=191.1
Q ss_pred cccCCCCEEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccC--CCCcHHHHhhhhcCCCCCCC-C----CC
Q 019673 25 QAAEAARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFS--NGLNIPDFISQHIGSEPTLP-Y----LS 97 (337)
Q Consensus 25 ~~~~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfs--nG~~~~d~la~~lgl~~~~P-y----l~ 97 (337)
...++|++++||||||||+|+........ ..+ -.| ..++..++. +|.+|+++.++-+|.--+.+ + .+
T Consensus 24 ~~~~~~~~l~vfGDSlSDsg~~~~~a~~~--~~~---~~~-~~~~gp~~~~G~~~~~~~~~p~~lg~l~~~~~~~~~~~~ 97 (370)
T COG3240 24 PSLAPFQRLVVFGDSLSDSGNYYRPAGHH--GDP---GSY-GTIPGPSYQNGNGYTYVTVVPETLGQLGVNHDFTYAAAD 97 (370)
T ss_pred ccccccceEEEeccchhhcccccCccccc--CCc---ccc-ccccCCcccCCCceeeeccchhhhccccccccccccccC
Confidence 44589999999999999999986432210 011 011 122333444 46778899998888111111 1 11
Q ss_pred CCCCCCccccccceeecccccccCC--CcccccccchHHHHHHHHHHHHHHHHhhCchh-hhhhccCcEEEEEeccchhh
Q 019673 98 PELTGSRLLVGANFASAGIGILNDT--GIQFVNIIRMFRQFEYFQEYQNRVTALIGPQR-TKQLVNGALILITVGGNDFV 174 (337)
Q Consensus 98 ~~~~~~~~~~G~NfA~gGA~~~~~~--~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~-~~~~~~~sL~~i~iG~ND~~ 174 (337)
++....-...|.|||+|||++.... ..--....++.+|+.+|+...... .+.... .-......|+.+|.|+|||+
T Consensus 98 ~~~~~~~~a~gnd~A~gga~~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~--~v~~~~~~~~l~p~~l~~~~ggand~~ 175 (370)
T COG3240 98 PNGLYIHWAGGNDLAVGGARSTEPNTGNSIGASATSLAQQVGAFLAAGQGG--FVWPNYPAQGLDPSALYFLWGGANDYL 175 (370)
T ss_pred cccccCcccccccHhhhccccccccccccccccccchHHHHHHHHHhcCCc--cccccccccccCHHHHHHHhhcchhhh
Confidence 2111112257999999999976554 111135679999999999864321 001100 01245788999999999998
Q ss_pred hhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHH
Q 019673 175 NNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNP 254 (337)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~ 254 (337)
..-.. . ....+.+......++++.|++|.++|||+++|+++|+++.+|...... .-...+...+..||.
T Consensus 176 ~~~~~----~---a~~~q~~~~~~~~~~~~~Vq~L~~AGA~~i~v~~lpDl~l~P~~~~~~----~~~~~a~~~t~~~Na 244 (370)
T COG3240 176 ALPML----K---AAAYQQLEGSTKADQSSAVQRLIAAGARNILVMTLPDLSLTPAGKAYG----TEAIQASQATIAFNA 244 (370)
T ss_pred ccccc----c---hhhhHHHhcchhhHHHHHHHHHHHhhccEEEEeecccccccccccccc----chHHHHHHHHHHHHH
Confidence 42111 0 111223444456789999999999999999999999999999877653 223378899999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEeccHHHHHHHHCcccCCCcCCccccccccccccCCCcccCC--CCCCcCCCCC-Ccc-C
Q 019673 255 QLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGMLTNPFFMYGLFKEKIIGDSCCSN--KSIIFTLVLN-LFV-R 330 (337)
Q Consensus 255 ~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~~~~~~~~~~~~~aCcg~--~~~~C~~~~~-~C~-p 330 (337)
-|+..|++++ .+|+.+|++.++++||.||++|||+|+ +..||.. ....|+...+ .|. |
T Consensus 245 ~L~~~L~~~g-----~nIi~iD~~~llk~im~nPa~fGlant-------------~~~~c~~~~~~~~~~a~~p~~~~~~ 306 (370)
T COG3240 245 SLTSQLEQLG-----GNIIRIDTYTLLKEIMTNPAEFGLANT-------------TAPACDATVSNPACSASLPALCAAP 306 (370)
T ss_pred HHHHHHHHhc-----CcEEEeEhHHHHHHHHhCHHhcCcccC-------------CCcccCcccCCcccccccccccCCc
Confidence 9999999875 699999999999999999999999999 8999975 3337876555 466 9
Q ss_pred CCcccc
Q 019673 331 ILRGFK 336 (337)
Q Consensus 331 ~~Y~f~ 336 (337)
+||+||
T Consensus 307 ~~ylFa 312 (370)
T COG3240 307 QKYLFA 312 (370)
T ss_pred cceeee
Confidence 999998
No 7
>PF00657 Lipase_GDSL: GDSL-like Lipase/Acylhydrolase; InterPro: IPR001087 A variety of lipolytic enzymes with serine as part of the active site have been identified []. Members of this entry include; Aeromonas hydrophila lipase, Vibrio mimicus arylesterase, Vibrio parahaemolyticus thermolabile haemolysin, rabbit phospholipase (AdRab-B), and Brassica napus anter-specific proline-rich protein.; GO: 0016788 hydrolase activity, acting on ester bonds, 0006629 lipid metabolic process; PDB: 2WAO_A 2WAB_A 1V2G_A 1U8U_A 1JRL_A 1IVN_A 1J00_A 1DEO_A 1K7C_A 1PP4_A ....
Probab=99.84 E-value=4.4e-20 Score=164.97 Aligned_cols=209 Identities=22% Similarity=0.331 Sum_probs=146.1
Q ss_pred EEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCcccccccee
Q 019673 33 FFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFA 112 (337)
Q Consensus 33 l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~NfA 112 (337)
|++||||++|. +|+++|.+|.+.++..+.-.....+ ...-..+.|+|
T Consensus 1 i~~fGDS~td~---------------------------~~~~~~~~~~~~~~~~l~~~~~~~~------~~~~~~~~n~a 47 (234)
T PF00657_consen 1 IVVFGDSLTDG---------------------------GGDSNGGGWPEGLANNLSSCLGANQ------RNSGVDVSNYA 47 (234)
T ss_dssp EEEEESHHHHT---------------------------TTSSTTCTHHHHHHHHCHHCCHHHH------HCTTEEEEEEE
T ss_pred CEEEeehhccc---------------------------CCCCCCcchhhhHHHHHhhcccccc------CCCCCCeeccc
Confidence 68999999999 2457889999999988722110000 00113468999
Q ss_pred ecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCCCCChh
Q 019673 113 SAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLP 192 (337)
Q Consensus 113 ~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~ 192 (337)
++|+++.............+..|+...... ....+.+|++|++|+||++. .. ......
T Consensus 48 ~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~lv~i~~G~ND~~~--~~-------~~~~~~ 105 (234)
T PF00657_consen 48 ISGATSDGDLYNLWAQVQNISQQISRLLDS-------------KSFYDPDLVVIWIGTNDYFN--NR-------DSSDNN 105 (234)
T ss_dssp -TT--CC-HGGCCCCTCHHHHHHHHHHHHH-------------HHHHTTSEEEEE-SHHHHSS--CC-------SCSTTH
T ss_pred cCCCccccccchhhHHHHHHHHHhhccccc-------------cccCCcceEEEecccCcchh--hc-------ccchhh
Confidence 999996322110000111123333322221 13347899999999999963 11 112446
Q ss_pred HHHHHHHHHHHHHHHHHHHcCCc-----EEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019673 193 DYVKYVISEYRKLLTRLYDLGAR-----RVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQY 267 (337)
Q Consensus 193 ~~v~~vv~~i~~~v~~L~~~GAr-----~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~ 267 (337)
..++.+++++.+.|++|++.|+| +++++++||++|.|...........|.+.+++.++.||++|++.+++|++++
T Consensus 106 ~~~~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~l~~~~~~l~~~~ 185 (234)
T PF00657_consen 106 TSVEEFVENLRNAIKRLRSNGARLIIVANIVVINLPPIGCLPAWSSNNKDSASCIERLNAIVAAFNSALREVAAQLRKDY 185 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTEEEEEEEEEEEHHC-GGGSTTHHHTHTTTCTTHHHHHHHHHHHHHHHHHHHHHHHHCH
T ss_pred hhHhhHhhhhhhhhhHHhccCCccccccccccccccccccccccccccccccccchhhHHHHHHHHHHHHHHhhhccccc
Confidence 67889999999999999999999 9999999999998887666544568999999999999999999999998887
Q ss_pred C-CceEEEEeccHHHHHH--HHCcc--cCCCcCC
Q 019673 268 G-SEIFVAVNTGKMQYNF--ISNPR--AFGMLTN 296 (337)
Q Consensus 268 p-~~~i~~~D~~~~~~~i--i~nP~--~yGf~~~ 296 (337)
+ +.++.++|+++.+.++ ..+|. +|-|-+.
T Consensus 186 ~~~~~v~~~D~~~~~~~~~~~~~~~~~~~~~~D~ 219 (234)
T PF00657_consen 186 PKGANVPYFDIYSIFSDMYGIQNPENDKYMFWDG 219 (234)
T ss_dssp HHHCTEEEEEHHHHHHHHHHHHHGGHHHCBBSSS
T ss_pred ccCCceEEEEHHHHHHHhhhccCcccceeccCCC
Confidence 6 8899999999999999 78886 6655554
No 8
>cd01832 SGNH_hydrolase_like_1 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. Myxobacterial members of this subfamily have been reported to be involved in adventurous gliding motility.
Probab=98.62 E-value=5.5e-07 Score=77.91 Aligned_cols=155 Identities=19% Similarity=0.195 Sum_probs=93.9
Q ss_pred EEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCccccccce
Q 019673 32 AFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANF 111 (337)
Q Consensus 32 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~Nf 111 (337)
+|++||||+++ |... . +....+..|++.+++.+.-+. +. ..-.|.
T Consensus 1 ~i~~~GDSit~-G~~~----------~------------~~~~~~~~~~~~l~~~l~~~~-~~-----------~~~~N~ 45 (185)
T cd01832 1 RYVALGDSITE-GVGD----------P------------VPDGGYRGWADRLAAALAAAD-PG-----------IEYANL 45 (185)
T ss_pred CeeEecchhhc-ccCC----------C------------CCCCccccHHHHHHHHhcccC-CC-----------ceEeec
Confidence 48899999998 3321 0 011245789999999875421 00 123799
Q ss_pred eecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCCCCCh
Q 019673 112 ASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSL 191 (337)
Q Consensus 112 A~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 191 (337)
+++|+++.+ .+..|+..-+ . ..-++++|.+|.||... . . .+
T Consensus 46 g~~G~~~~~----------~~~~~~~~~~----------------~-~~~d~vii~~G~ND~~~---~-----~---~~- 86 (185)
T cd01832 46 AVRGRRTAQ----------ILAEQLPAAL----------------A-LRPDLVTLLAGGNDILR---P-----G---TD- 86 (185)
T ss_pred cCCcchHHH----------HHHHHHHHHH----------------h-cCCCEEEEecccccccc---C-----C---CC-
Confidence 999998521 1112222110 0 14468999999999852 0 0 11
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCC-CCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 019673 192 PDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPL-GCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSE 270 (337)
Q Consensus 192 ~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lppl-gc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~ 270 (337)
..+..+++...|+++...+++ |+++++||. +..|.. ...+...+.+|+.|++..++ +
T Consensus 87 ---~~~~~~~~~~~i~~i~~~~~~-vil~~~~~~~~~~~~~-----------~~~~~~~~~~n~~l~~~a~~----~--- 144 (185)
T cd01832 87 ---PDTYRADLEEAVRRLRAAGAR-VVVFTIPDPAVLEPFR-----------RRVRARLAAYNAVIRAVAAR----Y--- 144 (185)
T ss_pred ---HHHHHHHHHHHHHHHHhCCCE-EEEecCCCccccchhH-----------HHHHHHHHHHHHHHHHHHHH----c---
Confidence 234566667777777766774 888888887 322221 12345677888877776553 2
Q ss_pred eEEEEeccHHHH
Q 019673 271 IFVAVNTGKMQY 282 (337)
Q Consensus 271 ~i~~~D~~~~~~ 282 (337)
++.++|++..+.
T Consensus 145 ~v~~vd~~~~~~ 156 (185)
T cd01832 145 GAVHVDLWEHPE 156 (185)
T ss_pred CCEEEecccCcc
Confidence 588999987653
No 9
>cd01839 SGNH_arylesterase_like SGNH_hydrolase subfamily, similar to arylesterase (7-aminocephalosporanic acid-deacetylating enzyme) of A. tumefaciens. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.56 E-value=1.5e-06 Score=76.88 Aligned_cols=174 Identities=15% Similarity=0.167 Sum_probs=97.9
Q ss_pred EEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCccccccce
Q 019673 32 AFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANF 111 (337)
Q Consensus 32 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~Nf 111 (337)
+|+.||||++. |-.. . -.+|++.+..|+..|++.|+-.. .+ ..-+|.
T Consensus 1 ~I~~~GDSiT~-G~~~-----------~---------~~~~~~~~~~w~~~L~~~l~~~~-~~-----------~~viN~ 47 (208)
T cd01839 1 TILCFGDSNTW-GIIP-----------D---------TGGRYPFEDRWPGVLEKALGANG-EN-----------VRVIED 47 (208)
T ss_pred CEEEEecCccc-CCCC-----------C---------CCCcCCcCCCCHHHHHHHHccCC-CC-----------eEEEec
Confidence 47899999983 2210 0 01245567789999999886432 11 123899
Q ss_pred eecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCCCCCh
Q 019673 112 ASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSL 191 (337)
Q Consensus 112 A~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 191 (337)
+++|.++..... .......++.+.+.+. ....-++++|++|.||+...+. .+
T Consensus 48 Gv~G~tt~~~~~-----~~~~~~~l~~l~~~l~------------~~~~pd~vii~lGtND~~~~~~----------~~- 99 (208)
T cd01839 48 GLPGRTTVLDDP-----FFPGRNGLTYLPQALE------------SHSPLDLVIIMLGTNDLKSYFN----------LS- 99 (208)
T ss_pred CcCCcceeccCc-----cccCcchHHHHHHHHH------------hCCCCCEEEEeccccccccccC----------CC-
Confidence 999988642110 0011112222222111 1125689999999999863210 01
Q ss_pred hHHHHHHHHHHHHHHHHHHHc------CCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHh
Q 019673 192 PDYVKYVISEYRKLLTRLYDL------GARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNS 265 (337)
Q Consensus 192 ~~~v~~vv~~i~~~v~~L~~~------GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~ 265 (337)
.+...+++.+.|+++.+. +..+|++...||+...+... ..+....+...+.||+.+++..++.
T Consensus 100 ---~~~~~~~l~~lv~~i~~~~~~~~~~~~~iil~~pp~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~a~~~-- 168 (208)
T cd01839 100 ---AAEIAQGLGALVDIIRTAPIEPGMPAPKILIVAPPPIRTPKGSL------AGKFAGAEEKSKGLADAYRALAEEL-- 168 (208)
T ss_pred ---HHHHHHHHHHHHHHHHhccccccCCCCCEEEEeCCccCccccch------hhhhccHHHHHHHHHHHHHHHHHHh--
Confidence 234455555556666554 45678888888872221111 1223344667778887777665542
Q ss_pred hcCCceEEEEeccHHHH
Q 019673 266 QYGSEIFVAVNTGKMQY 282 (337)
Q Consensus 266 ~~p~~~i~~~D~~~~~~ 282 (337)
++.++|++.++.
T Consensus 169 -----~~~~iD~~~~~~ 180 (208)
T cd01839 169 -----GCHFFDAGSVGS 180 (208)
T ss_pred -----CCCEEcHHHHhc
Confidence 478899887653
No 10
>cd01836 FeeA_FeeB_like SGNH_hydrolase subfamily, FeeA, FeeB and similar esterases/lipases. FeeA and FeeB are part of a biosynthetic gene cluster and may participate in the biosynthesis of long-chain N-acyltyrosines by providing saturated and unsaturated fatty acids, which it turn are loaded onto the acyl carrier protein FeeL. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.44 E-value=3.6e-06 Score=73.31 Aligned_cols=95 Identities=24% Similarity=0.249 Sum_probs=62.2
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCCCCCCchhhhhhcCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYD-LGARRVLVTGTGPLGCVPAERAMRGRN 238 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~-~GAr~~vV~~lpplgc~P~~~~~~~~~ 238 (337)
.-++++|.+|+||+... . . .++..+++.+.++++.+ ....+|+|.++||++..|....
T Consensus 67 ~pd~Vii~~G~ND~~~~--------~----~----~~~~~~~l~~li~~i~~~~~~~~iiv~~~p~~~~~~~~~~----- 125 (191)
T cd01836 67 RFDVAVISIGVNDVTHL--------T----S----IARWRKQLAELVDALRAKFPGARVVVTAVPPLGRFPALPQ----- 125 (191)
T ss_pred CCCEEEEEecccCcCCC--------C----C----HHHHHHHHHHHHHHHHhhCCCCEEEEECCCCcccCCCCcH-----
Confidence 45789999999998521 1 1 24566667777777776 3556899999999886653211
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHH
Q 019673 239 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQY 282 (337)
Q Consensus 239 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~ 282 (337)
.....+++..+.+|+.+++..++ ++ .+.++|++..+.
T Consensus 126 -~~~~~~~~~~~~~n~~~~~~a~~----~~--~~~~id~~~~~~ 162 (191)
T cd01836 126 -PLRWLLGRRARLLNRALERLASE----AP--RVTLLPATGPLF 162 (191)
T ss_pred -HHHHHHHHHHHHHHHHHHHHHhc----CC--CeEEEecCCccc
Confidence 11233455666777776665543 32 678889988764
No 11
>cd01823 SEST_like SEST_like. A family of secreted SGNH-hydrolases similar to Streptomyces scabies esterase (SEST), a causal agent of the potato scab disease, which hydrolyzes a specific ester bond in suberin, a plant lipid. The tertiary fold of this enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxylic acid.
Probab=98.41 E-value=5.2e-06 Score=76.01 Aligned_cols=197 Identities=17% Similarity=0.122 Sum_probs=103.6
Q ss_pred EEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCccccccce
Q 019673 32 AFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANF 111 (337)
Q Consensus 32 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~Nf 111 (337)
+++++|||++---... ++.+. . .....|. +..|++++++.|+.. + .+-.|+
T Consensus 2 ~~v~iGDS~~~G~g~~----------~~~~~-~--~~~c~rs--~~~y~~~la~~l~~~---~-----------~~~~n~ 52 (259)
T cd01823 2 RYVALGDSYAAGPGAG----------PLDDG-P--DDGCRRS--SNSYPTLLARALGDE---T-----------LSFTDV 52 (259)
T ss_pred CEEEecchhhcCCCCC----------cccCC-C--CCCCccC--CccHHHHHHHHcCCC---C-----------ceeeee
Confidence 6899999998533321 11000 0 1123333 467999999998753 1 123799
Q ss_pred eecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhcccc-CCC------
Q 019673 112 ASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVP-YSA------ 184 (337)
Q Consensus 112 A~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~-~~~------ 184 (337)
|.+|+++.+-... .......|.+. + ...-+|++|.+|+||+........ ...
T Consensus 53 a~sGa~~~~~~~~---~~~~~~~~~~~-----------l-------~~~~dlV~i~iG~ND~~~~~~~~~~~~~~~~~~~ 111 (259)
T cd01823 53 ACSGATTTDGIEP---QQGGIAPQAGA-----------L-------DPDTDLVTITIGGNDLGFADVVKACILTGGGSSL 111 (259)
T ss_pred eecCccccccccc---ccCCCchhhcc-----------c-------CCCCCEEEEEECccccchHHHHHHHhhccCCCCc
Confidence 9999997533211 01111122110 0 113689999999999853211000 000
Q ss_pred ----cCCCCChhHHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCCCc----hhhhh-hc-CCCCCcHHHHHHHHHHHH
Q 019673 185 ----RSRQFSLPDYVKYVISEYRKLLTRLYDL-GARRVLVTGTGPLGCV----PAERA-MR-GRNGQCAADLQRAADLYN 253 (337)
Q Consensus 185 ----~~~~~~~~~~v~~vv~~i~~~v~~L~~~-GAr~~vV~~lpplgc~----P~~~~-~~-~~~~~c~~~~n~~~~~~N 253 (337)
...........+...+++.+.|++|.+. .--+|++++.|++--. |.... .. .-.....+.+++..+.+|
T Consensus 112 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~i~~~~p~a~I~~~gyp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ln 191 (259)
T cd01823 112 AQEKGAADGARDAALDEVGARLKAVLDRIRERAPNARVVVVGYPRLFPPDGGDCDKSCSPGTPLTPADRPELNQLVDKLN 191 (259)
T ss_pred ccccccchhHHHHHHHHHHHHHHHHHHHHHhhCCCcEEEEecccccccCCCCCcccccccCCCCCHHHHHHHHHHHHHHH
Confidence 0000112233455666777777777754 3346899998775210 00000 00 000012345667777777
Q ss_pred HHHHHHHHHHHhhcCCceEEEEeccHHHH
Q 019673 254 PQLVQLVKDLNSQYGSEIFVAVNTGKMQY 282 (337)
Q Consensus 254 ~~L~~~l~~l~~~~p~~~i~~~D~~~~~~ 282 (337)
+.+++..++ +...++.++|++..+.
T Consensus 192 ~~i~~~a~~----~~~~~v~fvD~~~~f~ 216 (259)
T cd01823 192 ALIRRAAAD----AGDYKVRFVDTDAPFA 216 (259)
T ss_pred HHHHHHHHH----hCCceEEEEECCCCcC
Confidence 777765554 3335699999998765
No 12
>cd04501 SGNH_hydrolase_like_4 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=98.35 E-value=1.1e-05 Score=69.72 Aligned_cols=94 Identities=15% Similarity=0.151 Sum_probs=60.0
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 239 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~ 239 (337)
.-++++|.+|.||.... . . ..+..+++.+.|+.+.+.|++ ++++..+|....+...
T Consensus 59 ~~d~v~i~~G~ND~~~~--------~----~----~~~~~~~~~~li~~~~~~~~~-~il~~~~p~~~~~~~~------- 114 (183)
T cd04501 59 KPAVVIIMGGTNDIIVN--------T----S----LEMIKDNIRSMVELAEANGIK-VILASPLPVDDYPWKP------- 114 (183)
T ss_pred CCCEEEEEeccCccccC--------C----C----HHHHHHHHHHHHHHHHHCCCc-EEEEeCCCcCccccch-------
Confidence 35788999999998521 1 1 234566677777777778875 5556666654333211
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHHH
Q 019673 240 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFI 285 (337)
Q Consensus 240 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii 285 (337)
+....+.....||+.+++..++ .++.++|+++.+.+..
T Consensus 115 -~~~~~~~~~~~~n~~~~~~a~~-------~~v~~vd~~~~~~~~~ 152 (183)
T cd04501 115 -QWLRPANKLKSLNRWLKDYARE-------NGLLFLDFYSPLLDER 152 (183)
T ss_pred -hhcchHHHHHHHHHHHHHHHHH-------cCCCEEechhhhhccc
Confidence 1123456667888877766543 2589999999877643
No 13
>cd01844 SGNH_hydrolase_like_6 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.25 E-value=3.9e-05 Score=66.17 Aligned_cols=147 Identities=14% Similarity=0.159 Sum_probs=87.0
Q ss_pred EEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCccccccce
Q 019673 32 AFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANF 111 (337)
Q Consensus 32 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~Nf 111 (337)
+|++||||++.-.... +-+..|+..+++.+++. -+|.
T Consensus 1 ~iv~~GDSit~G~g~~--------------------------~~~~~~~~~~~~~~~~~-----------------v~N~ 37 (177)
T cd01844 1 PWVFYGTSISQGACAS--------------------------RPGMAWTAILARRLGLE-----------------VINL 37 (177)
T ss_pred CEEEEeCchhcCcCCC--------------------------CCCCcHHHHHHHHhCCC-----------------eEEe
Confidence 5889999998754320 11347888899887754 2799
Q ss_pred eecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCCCCCh
Q 019673 112 ASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSL 191 (337)
Q Consensus 112 A~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 191 (337)
+++|++... ..+. +... ...-++++|.+|.||... .
T Consensus 38 g~~G~~~~~-------------~~~~---~~~~-------------~~~pd~vii~~G~ND~~~--------~------- 73 (177)
T cd01844 38 GFSGNARLE-------------PEVA---ELLR-------------DVPADLYIIDCGPNIVGA--------E------- 73 (177)
T ss_pred eecccccch-------------HHHH---HHHH-------------hcCCCEEEEEeccCCCcc--------H-------
Confidence 999986421 0111 1110 124578999999999631 0
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 019673 192 PDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSE 270 (337)
Q Consensus 192 ~~~v~~vv~~i~~~v~~L~~~GA-r~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~ 270 (337)
.+..+++.+.|++|.+..- .+|++++.||.... ... .......++....+|+.+ ++++.+ ...
T Consensus 74 ----~~~~~~~~~~i~~i~~~~p~~~iil~~~~~~~~~---~~~----~~~~~~~~~~~~~~~~~~----~~~~~~-~~~ 137 (177)
T cd01844 74 ----AMVRERLGPLVKGLRETHPDTPILLVSPRYCPDA---ELT----PGRGKLTLAVRRALREAF----EKLRAD-GVP 137 (177)
T ss_pred ----HHHHHHHHHHHHHHHHHCcCCCEEEEecCCCCcc---ccC----cchhHHHHHHHHHHHHHH----HHHHhc-CCC
Confidence 1567778888888887764 45777777664221 111 112233444444444444 444432 234
Q ss_pred eEEEEeccHHH
Q 019673 271 IFVAVNTGKMQ 281 (337)
Q Consensus 271 ~i~~~D~~~~~ 281 (337)
++.++|.++++
T Consensus 138 ~v~~id~~~~~ 148 (177)
T cd01844 138 NLYYLDGEELL 148 (177)
T ss_pred CEEEecchhhc
Confidence 78999987665
No 14
>cd01838 Isoamyl_acetate_hydrolase_like Isoamyl-acetate hydrolyzing esterase-like proteins. SGNH_hydrolase subfamily similar to the Saccharomyces cerevisiae IAH1. IAH1 may be the major esterase that hydrolyses isoamyl acetate in sake mash. The SGNH-family of hydrolases is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases
Probab=98.24 E-value=1.9e-05 Score=68.62 Aligned_cols=104 Identities=13% Similarity=0.187 Sum_probs=60.1
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHH--cCCcEEEEeCCCCCCCchhhhhhcCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYD--LGARRVLVTGTGPLGCVPAERAMRGR 237 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~--~GAr~~vV~~lpplgc~P~~~~~~~~ 237 (337)
.-++++|++|.||..... ...... .+...+++...|+++.+ .|+ ++++++.||.+-.........
T Consensus 63 ~pd~vii~~G~ND~~~~~-------~~~~~~----~~~~~~~~~~~i~~~~~~~~~~-~ii~~t~~~~~~~~~~~~~~~- 129 (199)
T cd01838 63 QPDLVTIFFGANDAALPG-------QPQHVP----LDEYKENLRKIVSHLKSLSPKT-KVILITPPPVDEEAWEKSLED- 129 (199)
T ss_pred CceEEEEEecCccccCCC-------CCCccc----HHHHHHHHHHHHHHHHhhCCCC-eEEEeCCCCCCHHHHhhhhcc-
Confidence 578999999999986311 000011 23445556666666665 455 588888887653321110000
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHH
Q 019673 238 NGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYN 283 (337)
Q Consensus 238 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ 283 (337)
........++..+.||+.+++..++ + .+.++|+++.+..
T Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~a~~----~---~~~~iD~~~~~~~ 168 (199)
T cd01838 130 GGSQPGRTNELLKQYAEACVEVAEE----L---GVPVIDLWTAMQE 168 (199)
T ss_pred ccCCccccHHHHHHHHHHHHHHHHH----h---CCcEEEHHHHHHh
Confidence 0012234566777888777665543 3 4888999988764
No 15
>PRK10528 multifunctional acyl-CoA thioesterase I and protease I and lysophospholipase L1; Provisional
Probab=98.12 E-value=3.5e-05 Score=67.57 Aligned_cols=107 Identities=18% Similarity=0.243 Sum_probs=66.9
Q ss_pred CCCCEEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCcccc
Q 019673 28 EAARAFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLV 107 (337)
Q Consensus 28 ~~~~~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~ 107 (337)
..-.+|++||||++.-... ..+..|+.+|++.+.... .
T Consensus 8 ~~~~~iv~~GDSit~G~~~---------------------------~~~~~w~~~l~~~l~~~~---------------~ 45 (191)
T PRK10528 8 AAADTLLILGDSLSAGYRM---------------------------PASAAWPALLNDKWQSKT---------------S 45 (191)
T ss_pred CCCCEEEEEeCchhhcCCC---------------------------CccCchHHHHHHHHhhCC---------------C
Confidence 3467999999999763221 113468888888775331 0
Q ss_pred ccceeecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCC
Q 019673 108 GANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSR 187 (337)
Q Consensus 108 G~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~ 187 (337)
-+|-+++|.++. .+..+++ +.+. . .+-++++|.+|.||... +.
T Consensus 46 v~N~Gi~G~tt~-----------~~~~rl~---~~l~------------~-~~pd~Vii~~GtND~~~--------~~-- 88 (191)
T PRK10528 46 VVNASISGDTSQ-----------QGLARLP---ALLK------------Q-HQPRWVLVELGGNDGLR--------GF-- 88 (191)
T ss_pred EEecCcCcccHH-----------HHHHHHH---HHHH------------h-cCCCEEEEEeccCcCcc--------CC--
Confidence 278888887752 1222222 2111 1 13478999999999742 11
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHcCCcEEEE
Q 019673 188 QFSLPDYVKYVISEYRKLLTRLYDLGARRVLV 219 (337)
Q Consensus 188 ~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV 219 (337)
+ .++..+++.+.++++.+.|++.+++
T Consensus 89 --~----~~~~~~~l~~li~~~~~~~~~~ill 114 (191)
T PRK10528 89 --P----PQQTEQTLRQIIQDVKAANAQPLLM 114 (191)
T ss_pred --C----HHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 1 3456677777888888889887766
No 16
>cd01827 sialate_O-acetylesterase_like1 sialate O-acetylesterase_like family of the SGNH hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.12 E-value=6.7e-05 Score=65.03 Aligned_cols=157 Identities=11% Similarity=0.114 Sum_probs=85.8
Q ss_pred EEEEcCCccccCCCCCCcccccCCCCCCCCCCCCCCCCccccCCCCcHHHHhhhhcCCCCCCCCCCCCCCCCccccccce
Q 019673 32 AFFVFGDSLVDNGNNNYLATTARADSPPYGIDYPTRRPTGRFSNGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANF 111 (337)
Q Consensus 32 ~l~vFGDSlsD~Gn~~~~~~~~~~~~~PyG~~~p~~~~~GRfsnG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~Nf 111 (337)
+|+++|||++.-.... ...-|++.|++.++.+. .-.|+
T Consensus 2 ~i~~~GDSit~G~~~~---------------------------~~~~~~~~l~~~l~~~~---------------~v~N~ 39 (188)
T cd01827 2 KVACVGNSITEGAGLR---------------------------AYDSYPSPLAQMLGDGY---------------EVGNF 39 (188)
T ss_pred eEEEEecccccccCCC---------------------------CCCchHHHHHHHhCCCC---------------eEEec
Confidence 6889999998722210 12346778888775321 13699
Q ss_pred eecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCCCCCh
Q 019673 112 ASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSL 191 (337)
Q Consensus 112 A~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~ 191 (337)
+++|.++.+.... ......|++ +.. . ..-++++|.+|.||..... . ..
T Consensus 40 g~~G~t~~~~~~~----~~~~~~~~~---~~~-------------~-~~pd~Vii~~G~ND~~~~~-------~---~~- 87 (188)
T cd01827 40 GKSARTVLNKGDH----PYMNEERYK---NAL-------------A-FNPNIVIIKLGTNDAKPQN-------W---KY- 87 (188)
T ss_pred cCCcceeecCCCc----CccchHHHH---Hhh-------------c-cCCCEEEEEcccCCCCCCC-------C---cc-
Confidence 9999986533210 001112222 111 0 1357999999999985211 0 01
Q ss_pred hHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCc
Q 019673 192 PDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSE 270 (337)
Q Consensus 192 ~~~v~~vv~~i~~~v~~L~~~GA-r~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~ 270 (337)
.+....++.+.|+++.+.+. .+|++.+.+|...... .. ..-+...+.+|+.+++.. +++
T Consensus 88 ---~~~~~~~l~~li~~i~~~~~~~~iil~t~~p~~~~~~---------~~-~~~~~~~~~~~~~~~~~a----~~~--- 147 (188)
T cd01827 88 ---KDDFKKDYETMIDSFQALPSKPKIYICYPIPAYYGDG---------GF-INDNIIKKEIQPMIDKIA----KKL--- 147 (188)
T ss_pred ---HHHHHHHHHHHHHHHHHHCCCCeEEEEeCCcccccCC---------Cc-cchHHHHHHHHHHHHHHH----HHc---
Confidence 13344566677777766654 4677777766432110 11 112234455665555443 333
Q ss_pred eEEEEeccHHHH
Q 019673 271 IFVAVNTGKMQY 282 (337)
Q Consensus 271 ~i~~~D~~~~~~ 282 (337)
.+.++|+++.+.
T Consensus 148 ~~~~vD~~~~~~ 159 (188)
T cd01827 148 NLKLIDLHTPLK 159 (188)
T ss_pred CCcEEEcccccc
Confidence 577899987653
No 17
>cd01830 XynE_like SGNH_hydrolase subfamily, similar to the putative arylesterase/acylhydrolase from the rumen anaerobe Prevotella bryantii XynE. The P. bryantii XynE gene is located in a xylanase gene cluster. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.12 E-value=6.8e-05 Score=66.22 Aligned_cols=57 Identities=23% Similarity=0.261 Sum_probs=37.4
Q ss_pred CcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCC
Q 019673 161 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLG 226 (337)
Q Consensus 161 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplg 226 (337)
-++++|.+|.||....... .. .....++...+++...++++.+.|+ ++++.+++|..
T Consensus 75 p~~vii~~G~ND~~~~~~~-----~~---~~~~~~~~~~~~l~~ii~~~~~~~~-~vil~t~~P~~ 131 (204)
T cd01830 75 VRTVIILEGVNDIGASGTD-----FA---AAPVTAEELIAGYRQLIRRAHARGI-KVIGATITPFE 131 (204)
T ss_pred CCEEEEecccccccccccc-----cc---cCCCCHHHHHHHHHHHHHHHHHCCC-eEEEecCCCCC
Confidence 3578999999998632110 00 1111245667778888888888887 57778888764
No 18
>cd01821 Rhamnogalacturan_acetylesterase_like Rhamnogalacturan_acetylesterase_like subgroup of SGNH-hydrolases. Rhamnogalacturan acetylesterase removes acetyl esters from rhamnogalacturonan substrates, and renders them susceptible to degradation by rhamnogalacturonases. Rhamnogalacturonans are highly branched regions in pectic polysaccharides, consisting of repeating -(1,2)-L-Rha-(1,4)-D-GalUA disaccharide units, with many rhamnose residues substituted by neutral oligosaccharides such as arabinans, galactans and arabinogalactans. Extracellular enzymes participating in the degradation of plant cell wall polymers, such as Rhamnogalacturonan acetylesterase, would typically be found in saprophytic and plant pathogenic fungi and bacteria.
Probab=98.06 E-value=9.7e-05 Score=64.79 Aligned_cols=97 Identities=11% Similarity=0.090 Sum_probs=58.6
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 239 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~ 239 (337)
+-+|++|.+|.||..... ...... .++..+++.+.|+++.+.|++ +++++.||.....
T Consensus 65 ~pdlVii~~G~ND~~~~~-------~~~~~~----~~~~~~nl~~ii~~~~~~~~~-~il~tp~~~~~~~---------- 122 (198)
T cd01821 65 PGDYVLIQFGHNDQKPKD-------PEYTEP----YTTYKEYLRRYIAEARAKGAT-PILVTPVTRRTFD---------- 122 (198)
T ss_pred CCCEEEEECCCCCCCCCC-------CCCCCc----HHHHHHHHHHHHHHHHHCCCe-EEEECCccccccC----------
Confidence 458999999999986311 000011 345666777778888888886 5555555421110
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHHHH
Q 019673 240 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFIS 286 (337)
Q Consensus 240 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~ 286 (337)
.+. ..+.....||+.+++..++ + .+.++|+++.+.+..+
T Consensus 123 ~~~-~~~~~~~~~~~~~~~~a~~----~---~~~~vD~~~~~~~~~~ 161 (198)
T cd01821 123 EGG-KVEDTLGDYPAAMRELAAE----E---GVPLIDLNAASRALYE 161 (198)
T ss_pred CCC-cccccchhHHHHHHHHHHH----h---CCCEEecHHHHHHHHH
Confidence 010 2233446677777765554 2 5888999999887655
No 19
>PF13472 Lipase_GDSL_2: GDSL-like Lipase/Acylhydrolase family; PDB: 1ES9_A 1WAB_A 3DT9_A 1BWQ_A 1FXW_A 3DT6_A 1BWR_A 3DT8_A 1BWP_A 2WAA_A ....
Probab=98.05 E-value=7.4e-05 Score=62.94 Aligned_cols=95 Identities=22% Similarity=0.288 Sum_probs=61.9
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 239 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~ 239 (337)
.-++++|.+|+||.... .......++..+++.+.|+++...+ +++++.+||..-.+...
T Consensus 61 ~~d~vvi~~G~ND~~~~------------~~~~~~~~~~~~~l~~~i~~~~~~~--~vi~~~~~~~~~~~~~~------- 119 (179)
T PF13472_consen 61 KPDLVVISFGTNDVLNG------------DENDTSPEQYEQNLRRIIEQLRPHG--PVILVSPPPRGPDPRDP------- 119 (179)
T ss_dssp TCSEEEEE--HHHHCTC------------TTCHHHHHHHHHHHHHHHHHHHTTS--EEEEEE-SCSSSSTTTT-------
T ss_pred CCCEEEEEccccccccc------------ccccccHHHHHHHHHHHHHhhcccC--cEEEecCCCcccccccc-------
Confidence 44689999999999631 0123445677888888888888777 88888888765433211
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHH
Q 019673 240 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYN 283 (337)
Q Consensus 240 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ 283 (337)
+.+........+|+.+++..+ ++ .+.++|++..+.+
T Consensus 120 -~~~~~~~~~~~~~~~~~~~a~----~~---~~~~id~~~~~~~ 155 (179)
T PF13472_consen 120 -KQDYLNRRIDRYNQAIRELAK----KY---GVPFIDLFDAFDD 155 (179)
T ss_dssp -HTTCHHHHHHHHHHHHHHHHH----HC---TEEEEEHHHHHBT
T ss_pred -cchhhhhhHHHHHHHHHHHHH----Hc---CCEEEECHHHHcc
Confidence 123345666777877776544 33 7899999998654
No 20
>cd01834 SGNH_hydrolase_like_2 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=98.01 E-value=7.5e-05 Score=64.44 Aligned_cols=102 Identities=14% Similarity=0.123 Sum_probs=65.2
Q ss_pred CcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHH-HcCCcEEEEeCCCCCCCchhhhhhcCCCC
Q 019673 161 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLY-DLGARRVLVTGTGPLGCVPAERAMRGRNG 239 (337)
Q Consensus 161 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~-~~GAr~~vV~~lpplgc~P~~~~~~~~~~ 239 (337)
-++++|++|.||....+. .... .++..+++.+.|+.|. .....+|++.+.++....+.. .
T Consensus 62 ~d~v~l~~G~ND~~~~~~--------~~~~----~~~~~~~l~~~v~~~~~~~~~~~ii~~~p~~~~~~~~~-------~ 122 (191)
T cd01834 62 PDVVSIMFGINDSFRGFD--------DPVG----LEKFKTNLRRLIDRLKNKESAPRIVLVSPIAYEANEDP-------L 122 (191)
T ss_pred CCEEEEEeecchHhhccc--------cccc----HHHHHHHHHHHHHHHHcccCCCcEEEECCcccCCCCCC-------C
Confidence 579999999999974210 0011 3455666777777775 334456788776664332110 0
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHHHHCc
Q 019673 240 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNP 288 (337)
Q Consensus 240 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP 288 (337)
.-.+..+.....||+.|++..++ + ++.++|++..+.+....+
T Consensus 123 ~~~~~~~~~~~~~n~~l~~~a~~----~---~~~~iD~~~~~~~~~~~~ 164 (191)
T cd01834 123 PDGAEYNANLAAYADAVRELAAE----N---GVAFVDLFTPMKEAFQKA 164 (191)
T ss_pred CChHHHHHHHHHHHHHHHHHHHH----c---CCeEEecHHHHHHHHHhC
Confidence 01345677788888888876543 2 589999999998877653
No 21
>cd04506 SGNH_hydrolase_YpmR_like Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid. This subfamily contains sequences similar to Bacillus YpmR.
Probab=98.00 E-value=9.2e-05 Score=65.14 Aligned_cols=106 Identities=14% Similarity=0.205 Sum_probs=62.0
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCc-EEEEeCCC-CCCCchhhhhhcCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGAR-RVLVTGTG-PLGCVPAERAMRGR 237 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr-~~vV~~lp-plgc~P~~~~~~~~ 237 (337)
.-++++|.+|+||+....... ..+ ........-.+....++.+.|+++.+.+.+ +|+|++++ |.... .
T Consensus 68 ~~d~V~i~~G~ND~~~~~~~~-~~~-~~~~~~~~~~~~~~~~l~~~i~~ir~~~p~~~Ivv~~~~~p~~~~-----~--- 137 (204)
T cd04506 68 KADVITITIGGNDLMQVLEKN-FLS-LDVEDFKKAEETYQNNLKKIFKEIRKLNPDAPIFLVGLYNPFYVY-----F--- 137 (204)
T ss_pred cCCEEEEEecchhHHHHHHhc-ccc-chHHHHHHHHHHHHHHHHHHHHHHHHHCCCCeEEEEecCCccccc-----c---
Confidence 467899999999997532110 000 000011123445667778888888776543 67777653 32111 1
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHH
Q 019673 238 NGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYN 283 (337)
Q Consensus 238 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ 283 (337)
.-...+++.++.||+.+++..++ + -++.++|+++.+..
T Consensus 138 --~~~~~~~~~~~~~n~~~~~~a~~----~--~~v~~vd~~~~~~~ 175 (204)
T cd04506 138 --PNITEINDIVNDWNEASQKLASQ----Y--KNAYFVPIFDLFSD 175 (204)
T ss_pred --chHHHHHHHHHHHHHHHHHHHHh----C--CCeEEEehHHhhcC
Confidence 01234577888899887776543 2 25899999987764
No 22
>cd01825 SGNH_hydrolase_peri1 SGNH_peri1; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.93 E-value=4.5e-05 Score=65.93 Aligned_cols=92 Identities=12% Similarity=0.063 Sum_probs=54.2
Q ss_pred CcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCCCchhhhhhcCCCC
Q 019673 161 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDL-GARRVLVTGTGPLGCVPAERAMRGRNG 239 (337)
Q Consensus 161 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~-GAr~~vV~~lpplgc~P~~~~~~~~~~ 239 (337)
-++++|.+|.||.... .. . .+...+++...|+++.+. ...+|++++.||....+.
T Consensus 57 pd~Vii~~G~ND~~~~-------~~----~----~~~~~~~~~~li~~i~~~~~~~~iv~~~~~~~~~~~~--------- 112 (189)
T cd01825 57 PDLVILSYGTNEAFNK-------QL----N----ASEYRQQLREFIKRLRQILPNASILLVGPPDSLQKTG--------- 112 (189)
T ss_pred CCEEEEECCCcccccC-------CC----C----HHHHHHHHHHHHHHHHHHCCCCeEEEEcCCchhccCC---------
Confidence 4789999999997521 01 1 345566777777777764 455688888776432221
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHH
Q 019673 240 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYN 283 (337)
Q Consensus 240 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ 283 (337)
.+....+...+.+|+.+++..+ ++ .+.++|+++.+.+
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~a~----~~---~v~~vd~~~~~~~ 149 (189)
T cd01825 113 AGRWRTPPGLDAVIAAQRRVAK----EE---GIAFWDLYAAMGG 149 (189)
T ss_pred CCCcccCCcHHHHHHHHHHHHH----Hc---CCeEEeHHHHhCC
Confidence 0111112234566665555443 33 3889999988754
No 23
>cd01822 Lysophospholipase_L1_like Lysophospholipase L1-like subgroup of SGNH-hydrolases. The best characterized member in this family is TesA, an E. coli periplasmic protein with thioesterase, esterase, arylesterase, protease and lysophospholipase activity.
Probab=97.82 E-value=0.00057 Score=58.30 Aligned_cols=46 Identities=24% Similarity=0.409 Sum_probs=31.0
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGT 222 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~l 222 (337)
.-++++|.+|+||.... . + .++..+++.+.++++.+.|++ +++.++
T Consensus 64 ~pd~v~i~~G~ND~~~~--------~----~----~~~~~~~l~~li~~~~~~~~~-vil~~~ 109 (177)
T cd01822 64 KPDLVILELGGNDGLRG--------I----P----PDQTRANLRQMIETAQARGAP-VLLVGM 109 (177)
T ss_pred CCCEEEEeccCcccccC--------C----C----HHHHHHHHHHHHHHHHHCCCe-EEEEec
Confidence 34689999999997521 1 1 234566677778888778876 555554
No 24
>cd01824 Phospholipase_B_like Phospholipase-B_like. This subgroup of the SGNH-family of lipolytic enzymes may have both esterase and phospholipase-A/lysophospholipase activity. It's members may be involved in the conversion of phosphatidylcholine to fatty acids and glycerophosphocholine, perhaps in the context of dietary lipid uptake. Members may be membrane proteins. The tertiary fold of the SGNH-hydrolases is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; Its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases.
Probab=97.82 E-value=0.0013 Score=61.60 Aligned_cols=150 Identities=19% Similarity=0.138 Sum_probs=87.2
Q ss_pred cccceeecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcC
Q 019673 107 VGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARS 186 (337)
Q Consensus 107 ~G~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~ 186 (337)
...|.|+.|+++ .+|..|++...+..++ . . ...-...=.|++|+||+||....... .
T Consensus 83 ~~~N~av~Ga~s-----------~dL~~qa~~lv~r~~~---~--~-~i~~~~dwklVtI~IG~ND~c~~~~~------~ 139 (288)
T cd01824 83 SGFNVAEPGAKS-----------EDLPQQARLLVRRMKK---D--P-RVDFKNDWKLITIFIGGNDLCSLCED------A 139 (288)
T ss_pred cceeecccCcch-----------hhHHHHHHHHHHHHhh---c--c-ccccccCCcEEEEEecchhHhhhccc------c
Confidence 468999999995 3566788755443221 0 0 00001123478999999999752111 0
Q ss_pred CCCChhHHHHHHHHHHHHHHHHHHHcCCc-EEEEeCCCCCCCchhhhhhcC-----CCCCc--H--------HHHHHHHH
Q 019673 187 RQFSLPDYVKYVISEYRKLLTRLYDLGAR-RVLVTGTGPLGCVPAERAMRG-----RNGQC--A--------ADLQRAAD 250 (337)
Q Consensus 187 ~~~~~~~~v~~vv~~i~~~v~~L~~~GAr-~~vV~~lpplgc~P~~~~~~~-----~~~~c--~--------~~~n~~~~ 250 (337)
.. ...+...+++.+.++.|.+..-| .|+++++|++..++....... -...| . +...++.+
T Consensus 140 ~~----~~~~~~~~nL~~~L~~Lr~~~P~~~V~lv~~~~~~~l~~~~~~p~~c~~~~~~~C~c~~~~~~~~~~~~~~~~~ 215 (288)
T cd01824 140 NP----GSPQTFVKNLRKALDILRDEVPRAFVNLVGLLNVASLRSLTKKPLQCETLLAPECPCLLGPTENSYQDLKKFYK 215 (288)
T ss_pred cC----cCHHHHHHHHHHHHHHHHHhCCCcEEEEEcCCCcHHHHHhccCCccccccCCCcCCCcCCCCcchHHHHHHHHH
Confidence 01 22456677888889999888766 467888888765554321110 01123 2 46778888
Q ss_pred HHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHHHH
Q 019673 251 LYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFIS 286 (337)
Q Consensus 251 ~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~ 286 (337)
.|++.+++..++-+-+..+..+++.. ++.+.+.
T Consensus 216 ~y~~~~~eia~~~~~~~~~f~vv~qP---f~~~~~~ 248 (288)
T cd01824 216 EYQNEVEEIVESGEFDREDFAVVVQP---FFEDTSL 248 (288)
T ss_pred HHHHHHHHHHhcccccccCccEEeeC---chhcccc
Confidence 99988887766533223455666633 4444443
No 25
>cd01820 PAF_acetylesterase_like PAF_acetylhydrolase (PAF-AH)_like subfamily of SGNH-hydrolases. Platelet-activating factor (PAF) and PAF-AH are key players in inflammation and in atherosclerosis. PAF-AH is a calcium independent phospholipase A2 which exhibits strong substrate specificity towards PAF, hydrolyzing an acetyl ester at the sn-2 position. PAF-AH also degrades a family of oxidized PAF-like phospholipids with short sn-2 residues. In addition, PAF and PAF-AH are associated with neural migration and mammalian reproduction.
Probab=97.80 E-value=0.00041 Score=61.76 Aligned_cols=88 Identities=14% Similarity=0.168 Sum_probs=56.7
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCCCchhhhhhcCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLG-ARRVLVTGTGPLGCVPAERAMRGRN 238 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~G-Ar~~vV~~lpplgc~P~~~~~~~~~ 238 (337)
.-++++|++|+||+... . + .+++.+++.+.|+++.+.. -.+|++.+++|.+..|
T Consensus 89 ~pd~VvI~~G~ND~~~~--------~----~----~~~~~~~l~~ii~~l~~~~P~~~Iil~~~~p~~~~~--------- 143 (214)
T cd01820 89 NPKVVVLLIGTNNIGHT--------T----T----AEEIAEGILAIVEEIREKLPNAKILLLGLLPRGQNP--------- 143 (214)
T ss_pred CCCEEEEEecccccCCC--------C----C----HHHHHHHHHHHHHHHHHHCCCCeEEEEeccCCCCCc---------
Confidence 35789999999998521 1 1 3455677777778777663 3468888888765321
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHH
Q 019673 239 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQY 282 (337)
Q Consensus 239 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~ 282 (337)
..+++....+|+.+++...+ ..++.++|++..+.
T Consensus 144 ----~~~~~~~~~~n~~l~~~~~~------~~~v~~vd~~~~~~ 177 (214)
T cd01820 144 ----NPLRERNAQVNRLLAVRYDG------LPNVTFLDIDKGFV 177 (214)
T ss_pred ----hhHHHHHHHHHHHHHHHhcC------CCCEEEEeCchhhc
Confidence 12334456777776654321 23689999998864
No 26
>cd01835 SGNH_hydrolase_like_3 SGNH_hydrolase subfamily. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.64 E-value=0.0011 Score=57.66 Aligned_cols=93 Identities=17% Similarity=0.096 Sum_probs=50.7
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 239 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~ 239 (337)
.-++++|.+|.||...... . ....... +..+.+...++++ +.++ +|+++++||..-..
T Consensus 69 ~pd~V~i~~G~ND~~~~~~-----~-~~~~~~~----~~~~~~~~ii~~~-~~~~-~vi~~~~~p~~~~~---------- 126 (193)
T cd01835 69 VPNRLVLSVGLNDTARGGR-----K-RPQLSAR----AFLFGLNQLLEEA-KRLV-PVLVVGPTPVDEAK---------- 126 (193)
T ss_pred CCCEEEEEecCcccccccC-----c-ccccCHH----HHHHHHHHHHHHH-hcCC-cEEEEeCCCccccc----------
Confidence 4589999999999964210 0 0011222 2222233323322 2344 47888877764211
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHH
Q 019673 240 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYN 283 (337)
Q Consensus 240 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ 283 (337)
....+.....+|+.+++..++ + .+.++|++..+.+
T Consensus 127 --~~~~~~~~~~~n~~~~~~a~~----~---~~~~vd~~~~~~~ 161 (193)
T cd01835 127 --MPYSNRRIARLETAFAEVCLR----R---DVPFLDTFTPLLN 161 (193)
T ss_pred --cchhhHHHHHHHHHHHHHHHH----c---CCCeEeCccchhc
Confidence 112345566777777665543 2 5788999987664
No 27
>cd01831 Endoglucanase_E_like Endoglucanase E-like members of the SGNH hydrolase family; Endoglucanase E catalyzes the endohydrolysis of 1,4-beta-glucosidic linkages in cellulose, lichenin and cereal beta-D-glucans.
Probab=97.45 E-value=0.0023 Score=54.57 Aligned_cols=48 Identities=17% Similarity=0.228 Sum_probs=30.4
Q ss_pred cEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCC
Q 019673 162 ALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTG 223 (337)
Q Consensus 162 sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GA-r~~vV~~lp 223 (337)
++++|.+|.||..... . .+ ..+...++.+.|+++.+..- .+|++...|
T Consensus 57 d~vii~~G~ND~~~~~------~----~~----~~~~~~~~~~li~~i~~~~p~~~i~~~~~~ 105 (169)
T cd01831 57 DLVVINLGTNDFSTGN------N----PP----GEDFTNAYVEFIEELRKRYPDAPIVLMLGP 105 (169)
T ss_pred CEEEEECCcCCCCCCC------C----CC----HHHHHHHHHHHHHHHHHHCCCCeEEEEecC
Confidence 4789999999985211 0 01 34566777777888877653 356665433
No 28
>cd01841 NnaC_like NnaC (CMP-NeuNAc synthetase) _like subfamily of SGNH_hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles two of the three components of typical Ser-His-Asp(Glu) triad from other serine hydrolases. E. coli NnaC appears to be involved in polysaccharide synthesis.
Probab=97.16 E-value=0.004 Score=53.12 Aligned_cols=91 Identities=12% Similarity=0.172 Sum_probs=61.3
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHc-CCcEEEEeCCCCCCCchhhhhhcCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDL-GARRVLVTGTGPLGCVPAERAMRGRN 238 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~-GAr~~vV~~lpplgc~P~~~~~~~~~ 238 (337)
.-++++|++|+||.... . + .++..+++.+.++++.+. ...+++++++||..-.+.
T Consensus 51 ~pd~v~i~~G~ND~~~~--------~----~----~~~~~~~~~~l~~~~~~~~p~~~vi~~~~~p~~~~~~-------- 106 (174)
T cd01841 51 NPSKVFLFLGTNDIGKE--------V----S----SNQFIKWYRDIIEQIREEFPNTKIYLLSVLPVLEEDE-------- 106 (174)
T ss_pred CCCEEEEEeccccCCCC--------C----C----HHHHHHHHHHHHHHHHHHCCCCEEEEEeeCCcCcccc--------
Confidence 34788999999998521 1 1 345667777778887765 356789999888643221
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHH
Q 019673 239 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYN 283 (337)
Q Consensus 239 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ 283 (337)
+....+...+.||+.+++..++ + ++.++|+++.+.+
T Consensus 107 --~~~~~~~~~~~~n~~l~~~a~~----~---~~~~id~~~~~~~ 142 (174)
T cd01841 107 --IKTRSNTRIQRLNDAIKELAPE----L---GVTFIDLNDVLVD 142 (174)
T ss_pred --cccCCHHHHHHHHHHHHHHHHH----C---CCEEEEcHHHHcC
Confidence 1122345678899888876544 2 4889999998754
No 29
>cd01828 sialate_O-acetylesterase_like2 sialate_O-acetylesterase_like subfamily of the SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=97.01 E-value=0.0055 Score=52.03 Aligned_cols=86 Identities=22% Similarity=0.304 Sum_probs=56.4
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHH--cCCcEEEEeCCCCCCCchhhhhhcCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYD--LGARRVLVTGTGPLGCVPAERAMRGR 237 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~--~GAr~~vV~~lpplgc~P~~~~~~~~ 237 (337)
.-+++++.+|.||.... . + .++..+++.+.|+++.+ .++ +|++.++||.+ +.
T Consensus 48 ~pd~vvl~~G~ND~~~~--------~----~----~~~~~~~l~~li~~~~~~~~~~-~vi~~~~~p~~--~~------- 101 (169)
T cd01828 48 QPKAIFIMIGINDLAQG--------T----S----DEDIVANYRTILEKLRKHFPNI-KIVVQSILPVG--EL------- 101 (169)
T ss_pred CCCEEEEEeeccCCCCC--------C----C----HHHHHHHHHHHHHHHHHHCCCC-eEEEEecCCcC--cc-------
Confidence 35889999999998521 1 1 24556666777777776 444 58888888865 10
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHH
Q 019673 238 NGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQY 282 (337)
Q Consensus 238 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~ 282 (337)
....+..+..+|+.+++..++ .++.++|+++.+.
T Consensus 102 ----~~~~~~~~~~~n~~l~~~a~~-------~~~~~id~~~~~~ 135 (169)
T cd01828 102 ----KSIPNEQIEELNRQLAQLAQQ-------EGVTFLDLWAVFT 135 (169)
T ss_pred ----CcCCHHHHHHHHHHHHHHHHH-------CCCEEEechhhhc
Confidence 012234567888888776552 2678899988764
No 30
>cd01833 XynB_like SGNH_hydrolase subfamily, similar to Ruminococcus flavefaciens XynB. Most likely a secreted hydrolase with xylanase activity. SGNH hydrolases are a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.94 E-value=0.007 Score=50.65 Aligned_cols=91 Identities=20% Similarity=0.260 Sum_probs=63.5
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCc-EEEEeCCCCCCCchhhhhhcCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGAR-RVLVTGTGPLGCVPAERAMRGRN 238 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr-~~vV~~lpplgc~P~~~~~~~~~ 238 (337)
+-++++|.+|+||.... . + .++..+++.+.|+++.+..-+ +|++.++||..-.+
T Consensus 40 ~pd~vvi~~G~ND~~~~--------~----~----~~~~~~~~~~~i~~i~~~~p~~~ii~~~~~p~~~~~--------- 94 (157)
T cd01833 40 KPDVVLLHLGTNDLVLN--------R----D----PDTAPDRLRALIDQMRAANPDVKIIVATLIPTTDAS--------- 94 (157)
T ss_pred CCCEEEEeccCcccccC--------C----C----HHHHHHHHHHHHHHHHHhCCCeEEEEEeCCCCCCcc---------
Confidence 45889999999998631 1 1 245566777777877776433 46667766643211
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHH
Q 019673 239 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYN 283 (337)
Q Consensus 239 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ 283 (337)
.+...+.||+.+++.+++.+.. +..+.++|+++.+..
T Consensus 95 ------~~~~~~~~n~~l~~~~~~~~~~--~~~v~~vd~~~~~~~ 131 (157)
T cd01833 95 ------GNARIAEYNAAIPGVVADLRTA--GSPVVLVDMSTGYTT 131 (157)
T ss_pred ------hhHHHHHHHHHHHHHHHHHhcC--CCCEEEEecCCCCCC
Confidence 1567789999999999886543 568999999988753
No 31
>cd04502 SGNH_hydrolase_like_7 Members of the SGNH-hydrolase superfamily, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.89 E-value=0.022 Score=48.46 Aligned_cols=89 Identities=17% Similarity=0.296 Sum_probs=55.8
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCC-cEEEEeCCCCCCCchhhhhhcCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGA-RRVLVTGTGPLGCVPAERAMRGRN 238 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GA-r~~vV~~lpplgc~P~~~~~~~~~ 238 (337)
.-++++|.+|.||+.. +. + .+...+++.+.|+++.+.+. .+++++.+||. |. .
T Consensus 50 ~p~~vvi~~G~ND~~~--------~~----~----~~~~~~~~~~lv~~i~~~~~~~~iil~~~~p~---~~--~----- 103 (171)
T cd04502 50 QPRRVVLYAGDNDLAS--------GR----T----PEEVLRDFRELVNRIRAKLPDTPIAIISIKPS---PA--R----- 103 (171)
T ss_pred CCCEEEEEEecCcccC--------CC----C----HHHHHHHHHHHHHHHHHHCCCCcEEEEEecCC---Cc--c-----
Confidence 3468999999999742 11 1 34567778888888887753 35777776542 10 0
Q ss_pred CCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHH
Q 019673 239 GQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNF 284 (337)
Q Consensus 239 ~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~i 284 (337)
...+.....+|+.+++..++ .-.+.++|++..+.+.
T Consensus 104 ----~~~~~~~~~~n~~~~~~a~~------~~~v~~vD~~~~~~~~ 139 (171)
T cd04502 104 ----WALRPKIRRFNALLKELAET------RPNLTYIDVASPMLDA 139 (171)
T ss_pred ----hhhHHHHHHHHHHHHHHHhc------CCCeEEEECcHHHhCC
Confidence 11233456777776665432 1268899999887643
No 32
>KOG3035 consensus Isoamyl acetate-hydrolyzing esterase [Lipid transport and metabolism]
Probab=96.86 E-value=0.025 Score=50.02 Aligned_cols=118 Identities=14% Similarity=0.173 Sum_probs=75.0
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCCCchhhhhhcCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLG-ARRVLVTGTGPLGCVPAERAMRGRN 238 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~G-Ar~~vV~~lpplgc~P~~~~~~~~~ 238 (337)
.-+|++|+.|+||-... . + .+...-.. +++-++++++-++-|...- -.+|++++-||+...-..+...
T Consensus 68 ~p~lvtVffGaNDs~l~--~-~-~~~~~hvP----l~Ey~dNlr~iv~~lks~~~~~riIlitPpp~de~~~~~~~~--- 136 (245)
T KOG3035|consen 68 QPVLVTVFFGANDSCLP--E-P-SSLGQHVP----LEEYKDNLRKIVSHLKSLSPETRIILITPPPVDEEAWEKQEQ--- 136 (245)
T ss_pred CceEEEEEecCccccCC--C-C-CCCCCccC----HHHHHHHHHHHHHHhhccCCcceEEEecCCCcCHHHHHHHhc---
Confidence 45889999999998631 1 0 11000112 3455666777777776655 3468888888877554333322
Q ss_pred CCcH---HHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHHHHCcccCCCcCC
Q 019673 239 GQCA---ADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGMLTN 296 (337)
Q Consensus 239 ~~c~---~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~~~ 296 (337)
..|. +..|+.+..|++.+.+..+++ ++..+|..+.+++.-+-++++ |++.
T Consensus 137 e~~~~~~~RtNe~~~~Ya~ac~~la~e~-------~l~~vdlws~~Q~~~dw~~~~-ltDG 189 (245)
T KOG3035|consen 137 EPYVLGPERTNETVGTYAKACANLAQEI-------GLYVVDLWSKMQESDDWQTSC-LTDG 189 (245)
T ss_pred cchhccchhhhhHHHHHHHHHHHHHHHh-------CCeeeeHHhhhhhcccHHHHH-hccc
Confidence 2333 458999999999998887765 577889988877765555444 4443
No 33
>cd01829 SGNH_hydrolase_peri2 SGNH_peri2; putative periplasmic member of the SGNH-family of hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases.
Probab=96.67 E-value=0.017 Score=50.31 Aligned_cols=96 Identities=15% Similarity=0.077 Sum_probs=57.7
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 239 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~ 239 (337)
.-++++|.+|+||..... . .+........++.+...+++...++++.+.|++ +++++.||+.-
T Consensus 59 ~pd~vii~~G~ND~~~~~-~---~~~~~~~~~~~~~~~~~~~l~~lv~~~~~~~~~-vili~~pp~~~------------ 121 (200)
T cd01829 59 KPDVVVVFLGANDRQDIR-D---GDGYLKFGSPEWEEEYRQRIDELLNVARAKGVP-VIWVGLPAMRS------------ 121 (200)
T ss_pred CCCEEEEEecCCCCcccc-C---CCceeecCChhHHHHHHHHHHHHHHHHHhCCCc-EEEEcCCCCCC------------
Confidence 347888899999986321 1 000001112334455667777777777767775 77788887641
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHH
Q 019673 240 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQY 282 (337)
Q Consensus 240 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~ 282 (337)
...+.....+|+.+++..++ + .+.++|++..+.
T Consensus 122 ---~~~~~~~~~~~~~~~~~a~~----~---~~~~id~~~~~~ 154 (200)
T cd01829 122 ---PKLSADMVYLNSLYREEVAK----A---GGEFVDVWDGFV 154 (200)
T ss_pred ---hhHhHHHHHHHHHHHHHHHH----c---CCEEEEhhHhhc
Confidence 12234456677766655443 2 479999987763
No 34
>PF14606 Lipase_GDSL_3: GDSL-like Lipase/Acylhydrolase family; PDB: 3SKV_B.
Probab=96.65 E-value=0.015 Score=50.35 Aligned_cols=141 Identities=14% Similarity=0.256 Sum_probs=74.4
Q ss_pred CCCcHHHHhhhhcCCCCCCCCCCCCCCCCccccccceeecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchh
Q 019673 75 NGLNIPDFISQHIGSEPTLPYLSPELTGSRLLVGANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQR 154 (337)
Q Consensus 75 nG~~~~d~la~~lgl~~~~Pyl~~~~~~~~~~~G~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~ 154 (337)
-|..|+-.+++.+|++. +|.+++|.+-+ +..+-.+++.
T Consensus 20 pg~~~~~~~aR~l~~~~-----------------iNLGfsG~~~l-------------e~~~a~~ia~------------ 57 (178)
T PF14606_consen 20 PGMAYPAILARRLGLDV-----------------INLGFSGNGKL-------------EPEVADLIAE------------ 57 (178)
T ss_dssp GGGSHHHHHHHHHT-EE-----------------EEEE-TCCCS---------------HHHHHHHHH------------
T ss_pred CcccHHHHHHHHcCCCe-----------------EeeeecCcccc-------------CHHHHHHHhc------------
Confidence 36789999999999874 79999998732 2344433331
Q ss_pred hhhhccCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcC-CcEEEEeCCCCCCCchhhhh
Q 019673 155 TKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLG-ARRVLVTGTGPLGCVPAERA 233 (337)
Q Consensus 155 ~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~G-Ar~~vV~~lpplgc~P~~~~ 233 (337)
.+.++|++..|.| . . . +.+..++...|++|.+.= -.-|+++....-. . .
T Consensus 58 ----~~a~~~~ld~~~N--~----~-----------~----~~~~~~~~~fv~~iR~~hP~tPIllv~~~~~~--~---~ 107 (178)
T PF14606_consen 58 ----IDADLIVLDCGPN--M----S-----------P----EEFRERLDGFVKTIREAHPDTPILLVSPIPYP--A---G 107 (178)
T ss_dssp ----S--SEEEEEESHH--C----C-----------T----TTHHHHHHHHHHHHHTT-SSS-EEEEE----T--T---T
T ss_pred ----CCCCEEEEEeecC--C----C-----------H----HHHHHHHHHHHHHHHHhCCCCCEEEEecCCcc--c---c
Confidence 2459999999999 1 1 0 123444555667666543 5567776643311 1 1
Q ss_pred hcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHH------HHCcccCCCc
Q 019673 234 MRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNF------ISNPRAFGML 294 (337)
Q Consensus 234 ~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~i------i~nP~~yGf~ 294 (337)
..........+.+|+.+++.+++|+++ .+-++.|+|-..++-+- --+|..+||.
T Consensus 108 ------~~~~~~~~~~~~~~~~~r~~v~~l~~~-g~~nl~~l~g~~llg~d~e~tvDgvHP~DlG~~ 167 (178)
T PF14606_consen 108 ------YFDNSRGETVEEFREALREAVEQLRKE-GDKNLYYLDGEELLGDDHEATVDGVHPNDLGMM 167 (178)
T ss_dssp ------TS--TTS--HHHHHHHHHHHHHHHHHT-T-TTEEEE-HHHCS-------------------
T ss_pred ------ccCchHHHHHHHHHHHHHHHHHHHHHc-CCCcEEEeCchhhcCcccccccccccccccccc
Confidence 111222345678999999999999753 56789999887755222 2245666654
No 35
>cd00229 SGNH_hydrolase SGNH_hydrolase, or GDSL_hydrolase, is a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the typical Ser-His-Asp(Glu) triad from other serine hydrolases, but may lack the carboxlic acid.
Probab=96.37 E-value=0.036 Score=45.93 Aligned_cols=96 Identities=18% Similarity=0.163 Sum_probs=62.5
Q ss_pred ccCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHH-cCCcEEEEeCCCCCCCchhhhhhcCC
Q 019673 159 VNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYD-LGARRVLVTGTGPLGCVPAERAMRGR 237 (337)
Q Consensus 159 ~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~-~GAr~~vV~~lpplgc~P~~~~~~~~ 237 (337)
.+-+++++.+|+||+.... ... .....+.+.+.++++.+ ....+|++.+.|+....|.
T Consensus 64 ~~~d~vil~~G~ND~~~~~----------~~~----~~~~~~~~~~~i~~~~~~~~~~~vv~~~~~~~~~~~~------- 122 (187)
T cd00229 64 DKPDLVIIELGTNDLGRGG----------DTS----IDEFKANLEELLDALRERAPGAKVILITPPPPPPREG------- 122 (187)
T ss_pred CCCCEEEEEeccccccccc----------ccC----HHHHHHHHHHHHHHHHHHCCCCcEEEEeCCCCCCCch-------
Confidence 4688999999999996311 001 23445555666666664 4566788889988776654
Q ss_pred CCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHH
Q 019673 238 NGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNF 284 (337)
Q Consensus 238 ~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~i 284 (337)
..+.....+|+.+++..++.... ..+.++|++..+...
T Consensus 123 ------~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~d~~~~~~~~ 160 (187)
T cd00229 123 ------LLGRALPRYNEAIKAVAAENPAP---SGVDLVDLAALLGDE 160 (187)
T ss_pred ------hhHHHHHHHHHHHHHHHHHcCCC---cceEEEEhhhhhCCC
Confidence 22344567777777766654321 458999999887644
No 36
>KOG3670 consensus Phospholipase [Lipid transport and metabolism]
Probab=96.16 E-value=0.074 Score=51.15 Aligned_cols=89 Identities=21% Similarity=0.108 Sum_probs=53.1
Q ss_pred ccceeecccccccCCCcccccccchHHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCC
Q 019673 108 GANFASAGIGILNDTGIQFVNIIRMFRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSR 187 (337)
Q Consensus 108 G~NfA~gGA~~~~~~~~~~~~~~~l~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~ 187 (337)
+.|-|++||.. -+|..|-....+..++ ..+-. -...=-|+.||||+||+-. +-. +.
T Consensus 149 ~lNvA~~Ga~s-----------~Dlp~QAr~Lv~rik~---~~~i~---~~~dWKLi~IfIG~ND~c~-~c~----~~-- 204 (397)
T KOG3670|consen 149 QLNVAEPGAES-----------EDLPDQARDLVSRIKK---DKEIN---MKNDWKLITIFIGTNDLCA-YCE----GP-- 204 (397)
T ss_pred ccccccccccc-----------hhhHHHHHHHHHHHHh---ccCcc---cccceEEEEEEeccchhhh-hcc----CC--
Confidence 45667766653 3556677655554332 22210 0112358899999999985 322 11
Q ss_pred CCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 019673 188 QFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTG 221 (337)
Q Consensus 188 ~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~ 221 (337)
.+....++.-..+|.++++.|.+.==|.+|++-
T Consensus 205 -~~~~~~~~~~~~~i~~Al~~L~~nvPR~iV~lv 237 (397)
T KOG3670|consen 205 -ETPPSPVDQHKRNIRKALEILRDNVPRTIVSLV 237 (397)
T ss_pred -CCCCCchhHHHHHHHHHHHHHHhcCCceEEEEe
Confidence 122233455567799999999998888876543
No 37
>cd01826 acyloxyacyl_hydrolase_like Acyloxyacyl-hydrolase like subfamily of the SGNH-hydrolase family. Acyloxyacyl-hydrolase is a leukocyte-secreted enzyme that deacetylates bacterial lipopolysaccharides.
Probab=96.00 E-value=0.067 Score=50.10 Aligned_cols=124 Identities=16% Similarity=0.119 Sum_probs=70.3
Q ss_pred CcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCc--EEEEeCCCCCCCc---------h
Q 019673 161 GALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGAR--RVLVTGTGPLGCV---------P 229 (337)
Q Consensus 161 ~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr--~~vV~~lpplgc~---------P 229 (337)
-.+++|++|+||.....-. .. ....+++--+++.+.|+.|.+..-+ +|+++++|++... |
T Consensus 123 P~lVtI~lGgND~C~g~~d-----~~----~~tp~eefr~NL~~~L~~Lr~~lP~~s~ViLvgmpd~~~L~~~~~~r~hp 193 (305)
T cd01826 123 PALVIYSMIGNDVCNGPND-----TI----NHTTPEEFYENVMEALKYLDTKLPNGSHVILVGLVDGRILYDTLHNRLHP 193 (305)
T ss_pred CeEEEEEeccchhhcCCCc-----cc----cCcCHHHHHHHHHHHHHHHHhcCCCCCEEEEEeccchhhhhhhhcccccc
Confidence 4788889999999742111 00 0122456667788888999888754 8999999984211 1
Q ss_pred hhh-----hhcC--------CCCCcH------HHHHHHHHHHHHHHHHHHHHHHhh--cCCceEEEEeccHHHHHHHHCc
Q 019673 230 AER-----AMRG--------RNGQCA------ADLQRAADLYNPQLVQLVKDLNSQ--YGSEIFVAVNTGKMQYNFISNP 288 (337)
Q Consensus 230 ~~~-----~~~~--------~~~~c~------~~~n~~~~~~N~~L~~~l~~l~~~--~p~~~i~~~D~~~~~~~ii~nP 288 (337)
... +..+ .-..|. +...++...+=++|.+++.++.++ +....+++.|+. +.+|++..
T Consensus 194 lg~~~~~vty~~~y~~lncl~~spC~gw~~~n~t~rn~t~~~a~~l~~~~~~ia~~~~f~nF~v~~~~f~--l~~v~~~~ 271 (305)
T cd01826 194 IGQLNKDVTYPNLYDYLNCLQVSPCWGWLNSNETLRNLTSERAAQLSNVLKRIAANETFNNFDVHYIDFP--IQQIVDMW 271 (305)
T ss_pred chhcccccchhhhhhhhcccccCCccccccccccchhHHHHHHHHHHHHHHHHHhhccccceeEEEecch--HHHHhhHH
Confidence 000 0000 012343 223344444555555555555543 456788888874 66666665
Q ss_pred ccCCCcC
Q 019673 289 RAFGMLT 295 (337)
Q Consensus 289 ~~yGf~~ 295 (337)
.+.|-..
T Consensus 272 ~~~g~~~ 278 (305)
T cd01826 272 IAFGGQT 278 (305)
T ss_pred HhcCCCc
Confidence 5555443
No 38
>COG2755 TesA Lysophospholipase L1 and related esterases [Amino acid transport and metabolism]
Probab=95.03 E-value=0.37 Score=42.45 Aligned_cols=14 Identities=43% Similarity=0.776 Sum_probs=12.8
Q ss_pred CcEEEEEeccchhh
Q 019673 161 GALILITVGGNDFV 174 (337)
Q Consensus 161 ~sL~~i~iG~ND~~ 174 (337)
.++++|.+|+||..
T Consensus 78 ~d~v~i~lG~ND~~ 91 (216)
T COG2755 78 PDLVIIMLGGNDIG 91 (216)
T ss_pred CCEEEEEeeccccc
Confidence 78999999999985
No 39
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=90.54 E-value=1.1 Score=37.21 Aligned_cols=15 Identities=20% Similarity=0.215 Sum_probs=12.4
Q ss_pred cCcEEEEEeccchhh
Q 019673 160 NGALILITVGGNDFV 174 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~ 174 (337)
...+++|.+|+||..
T Consensus 50 ~~d~vvi~lGtNd~~ 64 (150)
T cd01840 50 LRKTVVIGLGTNGPF 64 (150)
T ss_pred CCCeEEEEecCCCCC
Confidence 457889999999973
No 40
>KOG4079 consensus Putative mitochondrial ribosomal protein mRpS25 [Translation, ribosomal structure and biogenesis]
Probab=84.55 E-value=0.58 Score=38.27 Aligned_cols=45 Identities=13% Similarity=0.140 Sum_probs=28.4
Q ss_pred HHHHHHHHCcccCCCcCCccccccccccccCCCcccCC-CCCCcCCCCC--CccCCCcccc
Q 019673 279 KMQYNFISNPRAFGMLTNPFFMYGLFKEKIIGDSCCSN-KSIIFTLVLN--LFVRILRGFK 336 (337)
Q Consensus 279 ~~~~~ii~nP~~yGf~~~~~~~~~~~~~~~~~~aCcg~-~~~~C~~~~~--~C~p~~Y~f~ 336 (337)
........||+.||.... ..--|.. ++..|...-. -|-..||.|+
T Consensus 118 e~ek~~k~nPAnFG~~c~-------------R~CiCEv~GQvPCpglvplP~~mrGKy~~a 165 (169)
T KOG4079|consen 118 ELEKIAKLNPANFGSKCE-------------RQCICEVQGQVPCPGLVPLPQCMRGKYRWA 165 (169)
T ss_pred HHHHHhhcChhhhccccc-------------ceEEEecCCcCCCCccccCchHhcceeecc
Confidence 345556789999998877 4444554 5666754332 2447788775
No 41
>PLN02757 sirohydrochlorine ferrochelatase
Probab=79.17 E-value=6.2 Score=33.36 Aligned_cols=64 Identities=13% Similarity=0.219 Sum_probs=43.2
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEe---cc
Q 019673 202 YRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVN---TG 278 (337)
Q Consensus 202 i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D---~~ 278 (337)
+.++|++|.+.|+|+|+| +|.++... .....-+.+.+++++.++|+.+|.+.. .+
T Consensus 60 l~eal~~l~~~g~~~vvV--------vP~FL~~G--------------~H~~~DIp~~v~~~~~~~p~~~i~~~~pLG~~ 117 (154)
T PLN02757 60 IKDAFGRCVEQGASRVIV--------SPFFLSPG--------------RHWQEDIPALTAEAAKEHPGVKYLVTAPIGLH 117 (154)
T ss_pred HHHHHHHHHHCCCCEEEE--------EEhhhcCC--------------cchHhHHHHHHHHHHHHCCCcEEEECCCCCCC
Confidence 345578888899999998 35555432 122345688888999999999988753 44
Q ss_pred HHHHHHHHC
Q 019673 279 KMQYNFISN 287 (337)
Q Consensus 279 ~~~~~ii~n 287 (337)
..+.+++.+
T Consensus 118 p~l~~ll~~ 126 (154)
T PLN02757 118 ELMVDVVND 126 (154)
T ss_pred HHHHHHHHH
Confidence 455555544
No 42
>COG3240 Phospholipase/lecithinase/hemolysin [Lipid metabolism / General function prediction only]
Probab=75.85 E-value=3.6 Score=39.54 Aligned_cols=71 Identities=13% Similarity=0.074 Sum_probs=52.0
Q ss_pred hccCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhh
Q 019673 158 LVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAM 234 (337)
Q Consensus 158 ~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~ 234 (337)
...+.++.-|+|+||+...-.. ..+...-..+......+.+++..++.++..+||+.+.|.++..|..+..
T Consensus 96 ~~~~~~~~~~a~gnd~A~gga~------~~~~~~~~~i~~~~~~~~~Qv~~~l~a~~~~~v~~~~~~~~l~p~~l~~ 166 (370)
T COG3240 96 ADPNGLYIHWAGGNDLAVGGAR------STEPNTGNSIGASATSLAQQVGAFLAAGQGGFVWPNYPAQGLDPSALYF 166 (370)
T ss_pred cCcccccCcccccccHhhhccc------cccccccccccccccchHHHHHHHHHhcCCccccccccccccCHHHHHH
Confidence 3478889999999999754322 1111111234455667788899999999999999999999999987653
No 43
>PRK13384 delta-aminolevulinic acid dehydratase; Provisional
Probab=70.77 E-value=11 Score=35.50 Aligned_cols=63 Identities=21% Similarity=0.243 Sum_probs=43.6
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEec
Q 019673 198 VISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNT 277 (337)
Q Consensus 198 vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~ 277 (337)
-++.+.+.++++.++|.+.|+++++|+. .-+ . + .+..+ =|..+++.++.+++++|+. ++..|+
T Consensus 59 sid~l~~~~~~~~~~Gi~~v~lFgv~~~-Kd~-----~----g-s~A~~-----~~g~v~~air~iK~~~pdl-~vi~DV 121 (322)
T PRK13384 59 PESALADEIERLYALGIRYVMPFGISHH-KDA-----K----G-SDTWD-----DNGLLARMVRTIKAAVPEM-MVIPDI 121 (322)
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeCCCCC-CCC-----C----c-ccccC-----CCChHHHHHHHHHHHCCCe-EEEeee
Confidence 4677888899999999999999999642 111 1 1 11111 1456678888899999986 455665
No 44
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=70.48 E-value=18 Score=32.66 Aligned_cols=84 Identities=17% Similarity=0.199 Sum_probs=48.8
Q ss_pred EEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHH
Q 019673 165 LITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAAD 244 (337)
Q Consensus 165 ~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~ 244 (337)
.++.|.+.....| .++- .... +...+-+.+.++.|...|.|+|+++|=.- +
T Consensus 61 ~i~yG~s~~h~~f-----pGTi-sl~~----~t~~~~l~di~~sl~~~Gf~~ivivngHg---------------G---- 111 (237)
T PF02633_consen 61 PIPYGCSPHHMGF-----PGTI-SLSP----ETLIALLRDILRSLARHGFRRIVIVNGHG---------------G---- 111 (237)
T ss_dssp -B--BB-GCCTTS-----TT-B-BB-H----HHHHHHHHHHHHHHHHHT--EEEEEESST---------------T----
T ss_pred CCccccCcccCCC-----CCeE-EeCH----HHHHHHHHHHHHHHHHcCCCEEEEEECCH---------------h----
Confidence 3578988876433 1211 1122 23344456668888999999999988321 1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhcCCceEEEEeccHHHHHH
Q 019673 245 LQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTGKMQYNF 284 (337)
Q Consensus 245 ~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~~~~~~i 284 (337)
....|...+++|++++++.++.++|.+.+....
T Consensus 112 -------N~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~~ 144 (237)
T PF02633_consen 112 -------NIAALEAAARELRQEYPGVKVFVINWWQLAEDE 144 (237)
T ss_dssp -------HHHHHHHHHHHHHHHGCC-EEEEEEGGGCSHCH
T ss_pred -------HHHHHHHHHHHHHhhCCCcEEEEeechhccchh
Confidence 112456677778877889999999998886554
No 45
>cd00384 ALAD_PBGS Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. They either contain a cysteine-rich zinc binding site (consensus DXCXCX(Y/F)X3G(H/Q)CG) or an aspartate-rich magnesium binding site (consensus DXALDX(Y/F)X3G(H/Q)DG). The cyste
Probab=70.34 E-value=13 Score=34.88 Aligned_cols=64 Identities=13% Similarity=0.099 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEe
Q 019673 197 YVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVN 276 (337)
Q Consensus 197 ~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D 276 (337)
.-++.+.+.++++.++|.+.|+++++|.. .-+ . + .+.. .=|..+++.++.+++++|+. ++..|
T Consensus 48 ~s~d~l~~~~~~~~~~Gi~~v~LFgv~~~-Kd~-----~----g-s~A~-----~~~g~v~~air~iK~~~p~l-~vi~D 110 (314)
T cd00384 48 LSVDSLVEEAEELADLGIRAVILFGIPEH-KDE-----I----G-SEAY-----DPDGIVQRAIRAIKEAVPEL-VVITD 110 (314)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEECCCCC-CCC-----C----c-cccc-----CCCChHHHHHHHHHHhCCCc-EEEEe
Confidence 34677888899999999999999999643 111 0 1 1111 11345678888899999976 45566
Q ss_pred c
Q 019673 277 T 277 (337)
Q Consensus 277 ~ 277 (337)
+
T Consensus 111 v 111 (314)
T cd00384 111 V 111 (314)
T ss_pred e
Confidence 5
No 46
>cd04824 eu_ALAD_PBGS_cysteine_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. The eukaryotic PBGSs represented by this model, which contain a cysteine-rich zinc binding motif (DXCXCX(Y/F)X3G(H/Q)CG), require zinc for their activity, they
Probab=67.39 E-value=7.8 Score=36.47 Aligned_cols=65 Identities=18% Similarity=0.225 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHcCCcEEEEeCCCCCC-CchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEe
Q 019673 198 VISEYRKLLTRLYDLGARRVLVTGTGPLG-CVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVN 276 (337)
Q Consensus 198 vv~~i~~~v~~L~~~GAr~~vV~~lpplg-c~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D 276 (337)
-++.+.+.++++.++|.+.|+++++|+-. .-+..-+ -+..=|..+++.++.+++++|+. +++.|
T Consensus 49 s~d~l~~~~~~~~~~Gi~~v~LFgv~~~~~Kd~~~gs--------------~a~~~~g~v~~air~iK~~~pdl-~vi~D 113 (320)
T cd04824 49 GVNRLEEFLRPLVAKGLRSVILFGVPLKPGKDDRSGS--------------AADDEDGPVIQAIKLIREEFPEL-LIACD 113 (320)
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeCCCccccCCcCccc--------------cccCCCChHHHHHHHHHHhCCCc-EEEEe
Confidence 46778888999999999999999997532 2221000 00122345677888888889986 45566
Q ss_pred c
Q 019673 277 T 277 (337)
Q Consensus 277 ~ 277 (337)
+
T Consensus 114 v 114 (320)
T cd04824 114 V 114 (320)
T ss_pred e
Confidence 6
No 47
>PRK09283 delta-aminolevulinic acid dehydratase; Validated
Probab=65.93 E-value=18 Score=34.25 Aligned_cols=64 Identities=13% Similarity=0.087 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEe
Q 019673 197 YVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVN 276 (337)
Q Consensus 197 ~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D 276 (337)
.-++.+.+.++++.++|.+.|+++++|.. .-+ . ..+..+ =|..+++.++.+++++|+. ++..|
T Consensus 56 ~s~d~l~~~v~~~~~~Gi~av~LFgv~~~-Kd~-----~-----gs~A~~-----~~g~v~rair~iK~~~p~l-~vi~D 118 (323)
T PRK09283 56 LSIDLLVKEAEEAVELGIPAVALFGVPEL-KDE-----D-----GSEAYN-----PDGLVQRAIRAIKKAFPEL-GVITD 118 (323)
T ss_pred eCHHHHHHHHHHHHHCCCCEEEEeCcCCC-CCc-----c-----cccccC-----CCCHHHHHHHHHHHhCCCc-EEEEe
Confidence 34677888899999999999999999532 111 1 111111 1445678888899999986 45667
Q ss_pred c
Q 019673 277 T 277 (337)
Q Consensus 277 ~ 277 (337)
+
T Consensus 119 V 119 (323)
T PRK09283 119 V 119 (323)
T ss_pred e
Confidence 6
No 48
>cd04823 ALAD_PBGS_aspartate_rich Porphobilinogen synthase (PBGS), which is also called delta-aminolevulinic acid dehydratase (ALAD), catalyzes the condensation of two 5-aminolevulinic acid (ALA) molecules to form the pyrrole porphobilinogen (PBG), which is the second step in the biosynthesis of tetrapyrroles, such as heme, vitamin B12 and chlorophyll. This reaction involves the formation of a Schiff base link between the substrate and the enzyme. PBGSs are metalloenzymes, some of which have a second, allosteric metal binding site, beside the metal ion binding site in their active site. Although PBGS is a family of homologous enzymes, its metal ion utilization at catalytic site varies between zinc and magnesium and/or potassium. PBGS can be classified into two groups based on differences in their active site metal binding site. All of PBGS_aspartate_rich contain an aspartate rich metal binding site with the general sequence DXALDX(Y/F)X3G(H/Q)DG. They also contain an allosteric magnesiu
Probab=64.76 E-value=18 Score=34.17 Aligned_cols=65 Identities=12% Similarity=0.097 Sum_probs=43.4
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCCC-CCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEE
Q 019673 197 YVISEYRKLLTRLYDLGARRVLVTGTGP-LGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAV 275 (337)
Q Consensus 197 ~vv~~i~~~v~~L~~~GAr~~vV~~lpp-lgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~ 275 (337)
.-++.+.+.++++.++|.+.|++++++| -..-+. + .+..+ =|..+++.++.+++++|+. +++.
T Consensus 51 ~s~d~l~~~v~~~~~~Gi~~v~lFgv~~~~~KD~~---------g-s~A~~-----~~g~v~~air~iK~~~p~l-~vi~ 114 (320)
T cd04823 51 LSIDELLKEAEEAVDLGIPAVALFPVTPPELKSED---------G-SEAYN-----PDNLVCRAIRAIKEAFPEL-GIIT 114 (320)
T ss_pred eCHHHHHHHHHHHHHcCCCEEEEecCCCcccCCcc---------c-ccccC-----CCChHHHHHHHHHHhCCCc-EEEE
Confidence 3467888889999999999999999843 211111 1 11111 1345678888888899986 4556
Q ss_pred ec
Q 019673 276 NT 277 (337)
Q Consensus 276 D~ 277 (337)
|+
T Consensus 115 DV 116 (320)
T cd04823 115 DV 116 (320)
T ss_pred ee
Confidence 66
No 49
>PF00490 ALAD: Delta-aminolevulinic acid dehydratase; InterPro: IPR001731 Tetrapyrroles are large macrocyclic compounds derived from a common biosynthetic pathway []. The end-product, uroporphyrinogen III, is used to synthesise a number of important molecules, including vitamin B12, haem, sirohaem, chlorophyll, coenzyme F430 and phytochromobilin []. The first stage in tetrapyrrole synthesis is the synthesis of 5-aminoaevulinic acid ALA via two possible routes: (1) condensation of succinyl CoA and glycine (C4 pathway) using ALA synthase (2.3.1.37 from EC), or (2) decarboxylation of glutamate (C5 pathway) via three different enzymes, glutamyl-tRNA synthetase (6.1.1.17 from EC) to charge a tRNA with glutamate, glutamyl-tRNA reductase (1.2.1.70 from EC) to reduce glutamyl-tRNA to glutamate-1-semialdehyde (GSA), and GSA aminotransferase (5.4.3.8 from EC) to catalyse a transamination reaction to produce ALA. The second stage is to convert ALA to uroporphyrinogen III, the first macrocyclic tetrapyrrolic structure in the pathway. This is achieved by the action of three enzymes in one common pathway: porphobilinogen (PBG) synthase (or ALA dehydratase, 4.2.1.24 from EC) to condense two ALA molecules to generate porphobilinogen; hydroxymethylbilane synthase (or PBG deaminase, 2.5.1.61 from EC) to polymerise four PBG molecules into preuroporphyrinogen (tetrapyrrole structure); and uroporphyrinogen III synthase (4.2.1.75 from EC) to link two pyrrole units together (rings A and D) to yield uroporphyrinogen III. Uroporphyrinogen III is the first branch point of the pathway. To synthesise cobalamin (vitamin B12), sirohaem, and coenzyme F430, uroporphyrinogen III needs to be converted into precorrin-2 by the action of uroporphyrinogen III methyltransferase (2.1.1.107 from EC). To synthesise haem and chlorophyll, uroporphyrinogen III needs to be decarboxylated into coproporphyrinogen III by the action of uroporphyrinogen III decarboxylase (4.1.1.37 from EC) []. This entry represents porphobilinogen (PBG) synthase (PBGS, or 5-aminoaevulinic acid dehydratase, or ALAD, 4.2.1.24 from EC), which functions during the second stage of tetrapyrrole biosynthesis. This enzyme catalyses a Knorr-type condensation reaction between two molecules of ALA to generate porphobilinogen, the pyrrolic building block used in later steps []. The structure of the enzyme is based on a TIM barrel topology made up of eight identical subunits, where each subunit binds to a metal ion that is essential for activity, usually zinc (in yeast, mammals and certain bacteria) or magnesium (in plants and other bacteria). A lysine has been implicated in the catalytic mechanism []. The lack of PBGS enzyme causes a rare porphyric disorder known as ALAD porphyria, which appears to involve conformational changes in the enzyme [.; GO: 0004655 porphobilinogen synthase activity, 0046872 metal ion binding, 0033014 tetrapyrrole biosynthetic process; PDB: 2C1H_A 1W1Z_A 1GZG_B 1W5O_B 1W5Q_B 2C18_A 1B4K_A 2C19_B 1W56_B 2C13_B ....
Probab=64.38 E-value=17 Score=34.32 Aligned_cols=64 Identities=16% Similarity=0.246 Sum_probs=39.8
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEec
Q 019673 199 ISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNT 277 (337)
Q Consensus 199 v~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~ 277 (337)
++.+.+.++++.++|.+.|+++++.+ |..+... + .+. ..=|..+++.+..+++.+|+. ++..|+
T Consensus 56 id~l~~~v~~~~~~GI~~v~lFgvi~----~~~Kd~~----g-s~a-----~~~~g~v~~air~iK~~~pdl-~vi~Dv 119 (324)
T PF00490_consen 56 IDSLVKEVEEAVDLGIRAVILFGVID----PSKKDEE----G-SEA-----YNPDGLVQRAIRAIKKAFPDL-LVITDV 119 (324)
T ss_dssp HHHHHHHHHHHHHTT--EEEEEEE-S----CSC-BSS------GGG-----GSTTSHHHHHHHHHHHHSTTS-EEEEEE
T ss_pred HHHHHHHHHHHHHCCCCEEEEEeeCC----cccCCcc----h-hcc-----cCCCChHHHHHHHHHHhCCCc-EEEEec
Confidence 57778889999999999999998832 1111111 1 110 122345677888899999986 566776
No 50
>PF01903 CbiX: CbiX; InterPro: IPR002762 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents the CbiX protein, which functions as a cobalt-chelatase in the anaerobic biosynthesis of cobalamin. It catalyses the insertion of cobalt into sirohydrochlorin. The structure of CbiX from Archaeoglobus fulgidus consists of a central mixed beta-sheet flanked by four alpha-helices, although it is about half the size of other Class II tetrapyrrole chelatases []. The CbiX proteins found in archaea appear to be shorter than those found in eubacteria [].; GO: 0016829 lyase activity, 0046872 metal ion binding, 0009236 cobalamin biosynthetic process; PDB: 2XWQ_C 2DJ5_A 1TJN_A 2XWS_A 3LYH_B 2JH3_D.
Probab=63.09 E-value=4.7 Score=31.16 Aligned_cols=51 Identities=18% Similarity=0.143 Sum_probs=34.0
Q ss_pred HHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHH-HHHHHHHHHhhcCCceEEEEec
Q 019673 204 KLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQ-LVQLVKDLNSQYGSEIFVAVNT 277 (337)
Q Consensus 204 ~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~-L~~~l~~l~~~~p~~~i~~~D~ 277 (337)
+.+++|.+.|+++|+|. |.++... .|=.. +.+.+++++.++|+.+|.+..-
T Consensus 41 ~~l~~l~~~g~~~ivvv--------P~fL~~G---------------~h~~~DIp~~l~~~~~~~~~~~v~~~~p 92 (105)
T PF01903_consen 41 EALERLVAQGARRIVVV--------PYFLFPG---------------YHVKRDIPEALAEARERHPGIEVRVAPP 92 (105)
T ss_dssp HCCHHHHCCTCSEEEEE--------EESSSSS---------------HHHHCHHHHHHCHHHHCSTTEEEEE---
T ss_pred HHHHHHHHcCCCeEEEE--------eeeecCc---------------cchHhHHHHHHHHHHhhCCceEEEECCC
Confidence 34688889999999885 3333321 22223 6778889999999999888653
No 51
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=62.24 E-value=16 Score=28.01 Aligned_cols=51 Identities=14% Similarity=0.084 Sum_probs=33.5
Q ss_pred HHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEe
Q 019673 204 KLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVN 276 (337)
Q Consensus 204 ~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D 276 (337)
+.+++|.+.|+++++|. |..+... ......+.+.+++++.++|+.+|.+.+
T Consensus 48 ~~l~~l~~~g~~~v~vv--------Plfl~~G--------------~h~~~dip~~~~~~~~~~~~~~i~~~~ 98 (101)
T cd03416 48 EALDELAAQGATRIVVV--------PLFLLAG--------------GHVKEDIPAALAAARARHPGVRIRYAP 98 (101)
T ss_pred HHHHHHHHcCCCEEEEE--------eeEeCCC--------------ccccccHHHHHHHHHHHCCCeEEEecC
Confidence 34778888999999884 3333321 122235666777777788988887754
No 52
>COG2845 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=56.85 E-value=1.6e+02 Score=28.20 Aligned_cols=82 Identities=20% Similarity=0.297 Sum_probs=49.6
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCc---EEEEeCCCCCCCchhhhhhcC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGAR---RVLVTGTGPLGCVPAERAMRG 236 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr---~~vV~~lpplgc~P~~~~~~~ 236 (337)
+=+..+|.+|.||.-. +.. .+...... .+.=.+.+.+-|.++.+.=.+ +|+++++|+.-
T Consensus 177 ~~a~vVV~lGaND~q~-~~~---gd~~~kf~----S~~W~~eY~kRvd~~l~ia~~~~~~V~WvGmP~~r---------- 238 (354)
T COG2845 177 KPAAVVVMLGANDRQD-FKV---GDVYEKFR----SDEWTKEYEKRVDAILKIAHTHKVPVLWVGMPPFR---------- 238 (354)
T ss_pred CccEEEEEecCCCHHh-ccc---CCeeeecC----chHHHHHHHHHHHHHHHHhcccCCcEEEeeCCCcc----------
Confidence 4566778999999975 322 11110111 123344555556666554333 58899998852
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHHHHHHH
Q 019673 237 RNGQCAADLQRAADLYNPQLVQLVKDLN 264 (337)
Q Consensus 237 ~~~~c~~~~n~~~~~~N~~L~~~l~~l~ 264 (337)
.+.+|.-...+|......++++.
T Consensus 239 -----~~~l~~dm~~ln~iy~~~vE~~~ 261 (354)
T COG2845 239 -----KKKLNADMVYLNKIYSKAVEKLG 261 (354)
T ss_pred -----ccccchHHHHHHHHHHHHHHHhC
Confidence 24566667789988888888764
No 53
>cd03414 CbiX_SirB_C Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), C-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both CbiX and SirB are found in a wide range of bacteria.
Probab=53.07 E-value=47 Score=25.99 Aligned_cols=50 Identities=28% Similarity=0.288 Sum_probs=31.3
Q ss_pred HHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEE
Q 019673 202 YRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAV 275 (337)
Q Consensus 202 i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~ 275 (337)
+.+.+++|.+.|.++++|.- .++.. | .|-+.+...+++++.+ |+.+|.+.
T Consensus 47 ~~~~l~~l~~~g~~~i~vvP--------~fL~~-----G----------~h~~~i~~~~~~~~~~-~~~~i~~~ 96 (117)
T cd03414 47 LPEALERLRALGARRVVVLP--------YLLFT-----G----------VLMDRIEEQVAELAAE-PGIEFVLA 96 (117)
T ss_pred HHHHHHHHHHcCCCEEEEEe--------chhcC-----C----------chHHHHHHHHHHHHhC-CCceEEEC
Confidence 34557788889999998843 22322 1 1122356677777777 77777764
No 54
>PF08885 GSCFA: GSCFA family; InterPro: IPR014982 This group of proteins are functionally uncharacterised. They have been named GSCFA after a highly conserved N-terminal motif in the alignment, they are functionally uncharacterised.
Probab=50.63 E-value=50 Score=30.26 Aligned_cols=85 Identities=8% Similarity=0.117 Sum_probs=54.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEE
Q 019673 195 VKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVA 274 (337)
Q Consensus 195 v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~ 274 (337)
++++++.+...++.|....-+-=+|+++.|+ |...+... .=.-..|..++ +.|+..+.+|.++++ ++.|
T Consensus 147 ~~ei~~~l~~~~~~l~~~nP~~kiilTVSPV---rl~~T~~~---~d~~~an~~SK---s~Lr~a~~~l~~~~~--~v~Y 215 (251)
T PF08885_consen 147 VEEILEDLEAIIDLLRSINPDIKIILTVSPV---RLIATFRD---RDGLVANQYSK---STLRAAAHELVRAFD--DVDY 215 (251)
T ss_pred HHHHHHHHHHHHHHHHhhCCCceEEEEeccc---hhhccccc---ccchhhhhhhH---HHHHHHHHHHHhcCC--CceE
Confidence 5677777777778777776554466677775 44443321 11123344544 367888889888664 7799
Q ss_pred EeccHHHHHHHHCccc
Q 019673 275 VNTGKMQYNFISNPRA 290 (337)
Q Consensus 275 ~D~~~~~~~ii~nP~~ 290 (337)
|-.|.++++-..++.-
T Consensus 216 FPSYEiv~d~lrdyrf 231 (251)
T PF08885_consen 216 FPSYEIVMDELRDYRF 231 (251)
T ss_pred cchHhhccCccccccc
Confidence 9999988855554433
No 55
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=49.75 E-value=43 Score=27.08 Aligned_cols=51 Identities=18% Similarity=0.124 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEE
Q 019673 200 SEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAV 275 (337)
Q Consensus 200 ~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~ 275 (337)
..+.+++++|.+.|.++|+|.-+-- +| | .+...|.+.+++++ +|..+|.+.
T Consensus 56 p~~~eaL~~l~~~G~~~V~V~Pl~l---~~----------G----------~e~~di~~~v~~~~--~~~~~i~~g 106 (127)
T cd03412 56 DTPEEALAKLAADGYTEVIVQSLHI---IP----------G----------EEYEKLKREVDAFK--KGFKKIKLG 106 (127)
T ss_pred CCHHHHHHHHHHCCCCEEEEEeCee---EC----------c----------HHHHHHHHHHHHHh--CCCceEEEc
Confidence 3456778999999999999965421 11 1 12356677777777 677777765
No 56
>COG0113 HemB Delta-aminolevulinic acid dehydratase [Coenzyme metabolism]
Probab=48.04 E-value=34 Score=32.16 Aligned_cols=66 Identities=15% Similarity=0.182 Sum_probs=44.0
Q ss_pred HHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEe
Q 019673 197 YVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVN 276 (337)
Q Consensus 197 ~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D 276 (337)
--++.+.+.++++.++|.+-|+++++|+.+ ..... + ..+-.-|..+++.++.+++.+|+. ++..|
T Consensus 58 ~s~d~l~~~~~~~~~lGi~av~LFgvp~~~----~Kd~~----g------s~A~~~~givqravr~ik~~~p~l-~iitD 122 (330)
T COG0113 58 YSLDRLVEEAEELVDLGIPAVILFGVPDDS----KKDET----G------SEAYDPDGIVQRAVRAIKEAFPEL-VVITD 122 (330)
T ss_pred ccHHHHHHHHHHHHhcCCCEEEEeCCCccc----ccCcc----c------ccccCCCChHHHHHHHHHHhCCCe-EEEee
Confidence 347778888999999999999999998632 11111 1 111123346678888888888854 45555
Q ss_pred c
Q 019673 277 T 277 (337)
Q Consensus 277 ~ 277 (337)
+
T Consensus 123 v 123 (330)
T COG0113 123 V 123 (330)
T ss_pred e
Confidence 5
No 57
>KOG2794 consensus Delta-aminolevulinic acid dehydratase [Coenzyme transport and metabolism]
Probab=47.37 E-value=25 Score=32.43 Aligned_cols=94 Identities=16% Similarity=0.236 Sum_probs=56.8
Q ss_pred cCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCC
Q 019673 160 NGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNG 239 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~ 239 (337)
++=+|-++|-.||-- +. |. ..++..-.-=++++++.+..|.+.|.|-|+++++++-+ .....
T Consensus 39 ~nliyPlFI~e~~dd--~~--pI------~SmPg~~r~G~~rL~e~l~plv~~Gl~sViLfgvv~~~----~Kd~~---- 100 (340)
T KOG2794|consen 39 ANLIYPLFIHEGEDD--FT--PI------DSMPGIYRLGVNRLKEELAPLVAKGLRSVILFGVVPEA----LKDPT---- 100 (340)
T ss_pred hheeeeEEEecCccc--cc--cc------ccCCchhHHHHHHHHHHHHHHHHhccceEEEecCCCcc----ccCcc----
Confidence 466777777666543 10 01 11222223346778999999999999999999997522 11110
Q ss_pred CcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEecc
Q 019673 240 QCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 278 (337)
Q Consensus 240 ~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~ 278 (337)
+ ..+..=|.-.-+.+..||..+|+. +++.|+-
T Consensus 101 g------s~Ads~~gpvi~ai~~lr~~fPdL-~i~cDVc 132 (340)
T KOG2794|consen 101 G------SEADSDNGPVIRAIRLLRDRFPDL-VIACDVC 132 (340)
T ss_pred c------ccccCCCCcHHHHHHHHHHhCcce-EEEeeee
Confidence 0 111222444566788889999987 5667763
No 58
>COG3581 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=46.18 E-value=38 Score=33.01 Aligned_cols=47 Identities=23% Similarity=0.434 Sum_probs=33.2
Q ss_pred HHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEecc
Q 019673 208 RLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 278 (337)
Q Consensus 208 ~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~ 278 (337)
.+++.|+..++- +-|+||.|..... .-++.+|.+++|+++++-+|.-
T Consensus 327 e~i~~g~~nvIc--lqPFGCmPnhI~~----------------------kgm~k~lk~~~p~ani~aVd~d 373 (420)
T COG3581 327 ELIESGVDNVIC--LQPFGCMPNHIVS----------------------KGMIKGLKRDKPKANIAAVDYD 373 (420)
T ss_pred HHHHcCCCceEE--ecCccCCcHHHHH----------------------HHHHHHHHhcCCCCceEEeecC
Confidence 355667777766 6799999943322 3466777888888888888765
No 59
>cd00419 Ferrochelatase_C Ferrochelatase, C-terminal domain: Ferrochelatase (protoheme ferrolyase or HemH) is the terminal enzyme of the heme biosynthetic pathway. It catalyzes the insertion of ferrous iron into the protoporphyrin IX ring yielding protoheme. This enzyme is ubiquitous in nature and widely distributed in bacteria and eukaryotes. Recently, some archaeal members have been identified. The oligomeric state of these enzymes varies depending on the presence of a dimerization motif at the C-terminus.
Probab=39.24 E-value=1.7e+02 Score=23.87 Aligned_cols=35 Identities=20% Similarity=0.153 Sum_probs=23.8
Q ss_pred HHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHH
Q 019673 203 RKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAAD 250 (337)
Q Consensus 203 ~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~ 250 (337)
.+.+++|.+.|+|+|+|+-+. +. ..|.+.+-++-.
T Consensus 80 ~~~l~~l~~~G~~~i~v~p~g-------F~------~D~~Etl~di~~ 114 (135)
T cd00419 80 DDALEELAKEGVKNVVVVPIG-------FV------SDHLETLYELDI 114 (135)
T ss_pred HHHHHHHHHcCCCeEEEECCc-------cc------cccHHHHHHHHH
Confidence 345788999999999995431 11 157787777643
No 60
>PF08331 DUF1730: Domain of unknown function (DUF1730); InterPro: IPR013542 This domain of unknown function occurs in iron-sulphur cluster-binding proteins together with the 4Fe-4S binding domain (IPR001450 from INTERPRO).
Probab=38.61 E-value=64 Score=23.67 Aligned_cols=65 Identities=20% Similarity=0.073 Sum_probs=30.8
Q ss_pred cCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHH---HHHHHHHHHHHHhhcCCce-EEEEe
Q 019673 212 LGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLY---NPQLVQLVKDLNSQYGSEI-FVAVN 276 (337)
Q Consensus 212 ~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~---N~~L~~~l~~l~~~~p~~~-i~~~D 276 (337)
-|||.|+|..++-..-.|..........+.......--+.| -++|+++.+.|+++.|+.+ -.++|
T Consensus 9 p~arSvIv~a~~Y~~~~~~~~~~~~~~~g~iarYA~G~DYH~vlk~~L~~l~~~i~~~~~~~~~r~~VD 77 (78)
T PF08331_consen 9 PGARSVIVLAFPYYPEPPPPPPPPGPGRGRIARYAWGRDYHKVLKKKLEQLAEWIRELGPDFEYRIFVD 77 (78)
T ss_pred CCCcEEEEEEccCCCccccccccCCCCCeeEeehhccCChHHHHHHHHHHHHHHHHHHCCCCCeEEeec
Confidence 58999999988755411111111111122222222212222 2456666666676777753 23455
No 61
>COG0646 MetH Methionine synthase I (cobalamin-dependent), methyltransferase domain [Amino acid transport and metabolism]
Probab=38.56 E-value=72 Score=29.99 Aligned_cols=109 Identities=19% Similarity=0.169 Sum_probs=71.3
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcC-------------------C-----CCCc-HHHHHHHH
Q 019673 195 VKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRG-------------------R-----NGQC-AADLQRAA 249 (337)
Q Consensus 195 v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~-------------------~-----~~~c-~~~~n~~~ 249 (337)
.+++++.++++++-|++-|+.=+++-++-++-++=.+..... + .+.- .+.++.+.
T Consensus 138 fd~l~~ay~eq~~~Li~gG~D~iLiET~~D~l~~KaA~~a~~~~~~~~~~~LPv~~s~Ti~~sG~tl~Gq~~~a~~~~l~ 217 (311)
T COG0646 138 FDELVEAYREQVEGLIDGGADLILIETIFDTLNAKAAVFAAREVFEELGVRLPVMISGTITDSGRTLSGQTIEAFLNSLE 217 (311)
T ss_pred HHHHHHHHHHHHHHHHhCCCcEEEEehhccHHHHHHHHHHHHHHHHhcCCcccEEEEEEEecCceecCCCcHHHHHHHhh
Confidence 678999999999999999999999999988766543321110 0 0111 11111111
Q ss_pred H------HHH-----HHHHHHHHHHHhh-------cC--------CceEEEEeccHHHHHHHHCcccCCCcCCccccccc
Q 019673 250 D------LYN-----PQLVQLVKDLNSQ-------YG--------SEIFVAVNTGKMQYNFISNPRAFGMLTNPFFMYGL 303 (337)
Q Consensus 250 ~------~~N-----~~L~~~l~~l~~~-------~p--------~~~i~~~D~~~~~~~ii~nP~~yGf~~~~~~~~~~ 303 (337)
. -.| ..++..++++.+- || +-+++|-+....+.+.++.-.+=|+.+.
T Consensus 218 ~~~~~~vGlNCa~Gp~~m~~~l~~ls~~~~~~vs~~PNAGLP~~~g~~~~Y~~~p~~~a~~~~~f~~~g~vnI------- 290 (311)
T COG0646 218 HLGPDAVGLNCALGPDEMRPHLRELSRIADAFVSVYPNAGLPNAFGERAVYDLTPEYMAEALAEFAEEGGVNI------- 290 (311)
T ss_pred ccCCcEEeeccccCHHHHHHHHHHHHhccCceEEEeCCCCCCcccCCccccCCCHHHHHHHHHHHHHhCCcee-------
Confidence 1 112 2455555555542 22 2367788888899999998888898888
Q ss_pred cccccCCCcccCC
Q 019673 304 FKEKIIGDSCCSN 316 (337)
Q Consensus 304 ~~~~~~~~aCcg~ 316 (337)
-..|||+
T Consensus 291 ------vGGCCGT 297 (311)
T COG0646 291 ------VGGCCGT 297 (311)
T ss_pred ------eccccCC
Confidence 7999996
No 62
>PF08029 HisG_C: HisG, C-terminal domain; InterPro: IPR013115 ATP phosphoribosyltransferase (2.4.2.17 from EC) is the enzyme that catalyzes the first step in the biosynthesis of histidine in bacteria, fungi and plants as shown below. It is a member of the larger phosphoribosyltransferase superfamily of enzymes which catalyse the condensation of 5-phospho-alpha-D-ribose 1-diphosphate with nitrogenous bases in the presence of divalent metal ions []. ATP + 5-phospho-alpha-D-ribose 1-diphosphate = 1-(5-phospho-D-ribosyl)-ATP + diphosphate Histidine biosynthesis is an energetically expensive process and ATP phosphoribosyltransferase activity is subject to control at several levels. Transcriptional regulation is based primarily on nutrient conditions and determines the amount of enzyme present in the cell, while feedback inihibition rapidly modulates activity in response to cellular conditions. The enzyme has been shown to be inhibited by 1-(5-phospho-D-ribosyl)-ATP, histidine, ppGpp (a signal associated with adverse environmental conditions) and ADP and AMP (which reflect the overall energy status of the cell). As this pathway of histidine biosynthesis is present only in prokayrotes, plants and fungi, this enzyme is a promising target for the development of novel antimicrobial compounds and herbicides. This entry represents the C-terminal portion of ATP phosphoribosyltransferase. The enzyme itself exists in equilibrium between an active dimeric form, an inactive hexameric form and higher aggregates [, ]. Interconversion between the various forms is largely reversible and is influenced by the binding of the natural substrates and inhibitors of the enzyme. This domain is not directly involved in catalysis but appears to be responsible for the formation of hexamers induced by the binding of inhibitors to the enzyme, thus regulating activity.; GO: 0000287 magnesium ion binding, 0003879 ATP phosphoribosyltransferase activity, 0000105 histidine biosynthetic process, 0005737 cytoplasm; PDB: 1Q1K_A 1H3D_A 2VD3_B 1NH7_A 1NH8_A.
Probab=36.89 E-value=29 Score=25.55 Aligned_cols=20 Identities=30% Similarity=0.406 Sum_probs=14.8
Q ss_pred HHHHHHHHHcCCcEEEEeCC
Q 019673 203 RKLLTRLYDLGARRVLVTGT 222 (337)
Q Consensus 203 ~~~v~~L~~~GAr~~vV~~l 222 (337)
.+.+.+|.++||+-|+|..+
T Consensus 53 ~~~~~~Lk~~GA~~Ilv~pi 72 (75)
T PF08029_consen 53 WDLMDKLKAAGASDILVLPI 72 (75)
T ss_dssp HHHHHHHHCTT-EEEEEEE-
T ss_pred HHHHHHHHHcCCCEEEEEec
Confidence 34478899999999999765
No 63
>TIGR03455 HisG_C-term ATP phosphoribosyltransferase, C-terminal domain. This domain corresponds to the C-terminal third of the HisG protein. It is absent in many lineages.
Probab=35.01 E-value=49 Score=25.75 Aligned_cols=23 Identities=30% Similarity=0.420 Sum_probs=18.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCC
Q 019673 200 SEYRKLLTRLYDLGARRVLVTGT 222 (337)
Q Consensus 200 ~~i~~~v~~L~~~GAr~~vV~~l 222 (337)
+.+.+.+.+|.++||+.|+|..+
T Consensus 74 ~~v~~~~~~Lk~~GA~~Ilv~~i 96 (100)
T TIGR03455 74 KVVNELIDKLKAAGARDILVLPI 96 (100)
T ss_pred HHHHHHHHHHHHcCCCeEEEech
Confidence 34566788999999999999764
No 64
>PRK13717 conjugal transfer protein TrbI; Provisional
Probab=34.80 E-value=74 Score=25.92 Aligned_cols=27 Identities=11% Similarity=0.116 Sum_probs=24.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019673 242 AADLQRAADLYNPQLVQLVKDLNSQYG 268 (337)
Q Consensus 242 ~~~~n~~~~~~N~~L~~~l~~l~~~~p 268 (337)
.+..+.++..||+.|.+.|++.+++|.
T Consensus 70 e~q~e~lt~rF~~aL~~~L~~yq~~H~ 96 (128)
T PRK13717 70 EAQSKALSARFNTALEASLQAWQQKHH 96 (128)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 567889999999999999999998873
No 65
>PRK09121 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=34.55 E-value=1.5e+02 Score=28.33 Aligned_cols=55 Identities=5% Similarity=-0.089 Sum_probs=38.6
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHH
Q 019673 190 SLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLV 257 (337)
Q Consensus 190 ~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~ 257 (337)
+..+++.+++..+.+.++.|+++|+|.|-+ .=|.+.. .|.+.+...++.+|..+.
T Consensus 146 ~~~el~~dlA~al~~Ei~~L~~aG~~~IQi-DeP~l~~------------~~~~~~~~~v~~~n~~~~ 200 (339)
T PRK09121 146 SREKLAWEFAKILNQEAKELEAAGVDIIQF-DEPAFNV------------FFDEVNDWGVAALERAIE 200 (339)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cccHHhh------------hhHHHHHHHHHHHHHHHc
Confidence 457889999999999999999999998665 3344432 233445555566665554
No 66
>TIGR01091 upp uracil phosphoribosyltransferase. that includes uracil phosphoribosyltransferase, uridine kinases, and other, uncharacterized proteins.
Probab=33.70 E-value=1.2e+02 Score=26.71 Aligned_cols=50 Identities=10% Similarity=0.021 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEecc
Q 019673 199 ISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 278 (337)
Q Consensus 199 v~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~ 278 (337)
-..+..+++.|.+.|+++|.+..+- . + ...++.+++++|+++|+..-+.
T Consensus 135 G~Tl~~ai~~L~~~G~~~I~v~~ll--~--------------~---------------~~gl~~l~~~~p~v~i~~~~id 183 (207)
T TIGR01091 135 GGTMIAALDLLKKRGAKKIKVLSIV--A--------------A---------------PEGIEAVEKAHPDVDIYTAAID 183 (207)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEEe--c--------------C---------------HHHHHHHHHHCCCCEEEEEEEC
Confidence 4567788999999999999887761 0 1 2345556778999999887554
Q ss_pred H
Q 019673 279 K 279 (337)
Q Consensus 279 ~ 279 (337)
.
T Consensus 184 ~ 184 (207)
T TIGR01091 184 E 184 (207)
T ss_pred C
Confidence 4
No 67
>COG1209 RfbA dTDP-glucose pyrophosphorylase [Cell envelope biogenesis, outer membrane]
Probab=28.11 E-value=2.3e+02 Score=26.47 Aligned_cols=81 Identities=15% Similarity=0.228 Sum_probs=49.8
Q ss_pred HHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCC---------------CCCcHHHHH---HHHH------------HHHH
Q 019673 205 LLTRLYDLGARRVLVTGTGPLGCVPAERAMRGR---------------NGQCAADLQ---RAAD------------LYNP 254 (337)
Q Consensus 205 ~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~---------------~~~c~~~~n---~~~~------------~~N~ 254 (337)
.+++|..+|.|.|+|+.-|- -.|.+.....+ ..|...++- +++. .+.
T Consensus 37 ~l~~L~~aGI~dI~II~~~~--~~~~~~~llGdgs~~gv~itY~~Q~~p~GlA~Av~~a~~fv~~~~f~l~LGDNi~~~- 113 (286)
T COG1209 37 PLETLMLAGIRDILIVVGPE--DKPTFKELLGDGSDFGVDITYAVQPEPDGLAHAVLIAEDFVGDDDFVLYLGDNIFQD- 113 (286)
T ss_pred HHHHHHHcCCceEEEEecCC--chhhhhhhhcCccccCcceEEEecCCCCcHHHHHHHHHhhcCCCceEEEecCceecc-
Confidence 37899999999999887762 12333333221 122222211 1111 123
Q ss_pred HHHHHHHHHHhhcCCceEEEEeccHHHHHHHHCcccCCCcCC
Q 019673 255 QLVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGMLTN 296 (337)
Q Consensus 255 ~L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~~~ 296 (337)
.|.+.++.+.++-+++.|...-+ +||++||-.+.
T Consensus 114 ~l~~~~~~~~~~~~ga~i~~~~V--------~dP~rfGV~e~ 147 (286)
T COG1209 114 GLSELLEHFAEEGSGATILLYEV--------DDPSRYGVVEF 147 (286)
T ss_pred ChHHHHHHHhccCCCcEEEEEEc--------CCcccceEEEE
Confidence 67888888877778888877665 49999997654
No 68
>PF06908 DUF1273: Protein of unknown function (DUF1273); InterPro: IPR024718 This entry represents a functionally uncharacterised domain.; PDB: 2NX2_A.
Probab=28.06 E-value=1.5e+02 Score=25.54 Aligned_cols=28 Identities=18% Similarity=0.368 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 019673 194 YVKYVISEYRKLLTRLYDLGARRVLVTG 221 (337)
Q Consensus 194 ~v~~vv~~i~~~v~~L~~~GAr~~vV~~ 221 (337)
-+..+-..+.+.|.+|++.|.+.|+.-+
T Consensus 23 ~~~~ik~~L~~~i~~lie~G~~~fi~Gg 50 (177)
T PF06908_consen 23 KIQVIKKALKKQIIELIEEGVRWFITGG 50 (177)
T ss_dssp HHHHHHHHHHHHHHHHHTTT--EEEE--
T ss_pred hHHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 3566778889999999999999888755
No 69
>cd04236 AAK_NAGS-Urea AAK_NAGS-Urea: N-acetylglutamate (NAG) kinase-like domain of the NAG Synthase (NAGS) of the urea cycle found in animals. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate; NAG is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Ureogenic NAGS activity is dependent on the concentration of glutamate (substrate) and arginine (activator). Domain architecture of ureogenic NAGS consists of an N-terminal NAG kinase-like (ArgB) domain (this CD) and a C-terminal DUF619 domain. Members of this CD belong to the protein superfamily, the Amino Acid Kinase Family (AAKF).
Probab=26.94 E-value=2.2e+02 Score=26.34 Aligned_cols=63 Identities=14% Similarity=0.091 Sum_probs=43.3
Q ss_pred HHHHHHHHHHHHHHHHhhCchhhhhhccCcEEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHc
Q 019673 133 FRQFEYFQEYQNRVTALIGPQRTKQLVNGALILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDL 212 (337)
Q Consensus 133 ~~Qv~~f~~~~~~~~~~~g~~~~~~~~~~sL~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~ 212 (337)
..++++|+++.+.. ....++..++|-+|+|=+.. ++..+++...+.-|+..
T Consensus 16 ~~e~~~~l~~f~~~---------~~~~~~~f~VIK~GG~~~~~--------------------~~~~~~l~~dla~L~~l 66 (271)
T cd04236 16 PREARYWLTQFQIA---------MPNDWPAFAVLEVDHSVFRS--------------------LEMVQSLSFGLAFLQRM 66 (271)
T ss_pred HHHHHHHHHHhhcc---------CCCCCCCEEEEEEChhhhcC--------------------chhHHHHHHHHHHHHHC
Confidence 35666666654321 01135788888999875420 23456677888999999
Q ss_pred CCcEEEEeCCCC
Q 019673 213 GARRVLVTGTGP 224 (337)
Q Consensus 213 GAr~~vV~~lpp 224 (337)
|.|-|+|.+-.|
T Consensus 67 Gl~~VlVHGggp 78 (271)
T cd04236 67 DMKLLVVMGLSA 78 (271)
T ss_pred CCeEEEEeCCCh
Confidence 999999999876
No 70
>PRK13660 hypothetical protein; Provisional
Probab=26.82 E-value=4.1e+02 Score=23.09 Aligned_cols=27 Identities=26% Similarity=0.570 Sum_probs=22.0
Q ss_pred HHHHHHHHHHHHHHHHHcCCcEEEEeC
Q 019673 195 VKYVISEYRKLLTRLYDLGARRVLVTG 221 (337)
Q Consensus 195 v~~vv~~i~~~v~~L~~~GAr~~vV~~ 221 (337)
+..+-..+.+.|.++++.|.+.|++-+
T Consensus 24 ~~~IK~aL~~~l~~~~e~G~~wfi~gg 50 (182)
T PRK13660 24 IKYIKKAIKRKLIALLEEGLEWVIISG 50 (182)
T ss_pred hHHHHHHHHHHHHHHHHCCCCEEEECC
Confidence 445567788999999999999988865
No 71
>PRK06520 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase; Provisional
Probab=26.21 E-value=1e+02 Score=29.78 Aligned_cols=36 Identities=22% Similarity=0.444 Sum_probs=29.7
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCC
Q 019673 190 SLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLG 226 (337)
Q Consensus 190 ~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplg 226 (337)
+..+++.+++..+.+.++.|+++|+|.|-+ .=|.+.
T Consensus 160 ~~~~~~~dlA~al~~Ei~~L~~aG~~~IQi-Dep~l~ 195 (368)
T PRK06520 160 DLDDYFDDLAKTWRDAIKAFYDAGCRYLQL-DDTVWA 195 (368)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEe-cCcchh
Confidence 467899999999999999999999998665 445543
No 72
>TIGR02744 TrbI_Ftype type-F conjugative transfer system protein TrbI. This protein is an essential component of the F-type conjugative transfer sytem for plasmid DNA transfer and has been shown to be localized to the periplasm.
Probab=25.88 E-value=1.4e+02 Score=23.87 Aligned_cols=27 Identities=15% Similarity=0.101 Sum_probs=23.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcC
Q 019673 242 AADLQRAADLYNPQLVQLVKDLNSQYG 268 (337)
Q Consensus 242 ~~~~n~~~~~~N~~L~~~l~~l~~~~p 268 (337)
.+..+.+...||+.|.+.|++++++|-
T Consensus 57 e~q~~~~~~rF~~~L~~~L~~yq~~H~ 83 (112)
T TIGR02744 57 EAQQKALLGRFNALLEAELQAWQAQHH 83 (112)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 467788999999999999999999873
No 73
>cd03311 CIMS_C_terminal_like CIMS - Cobalamine-independent methonine synthase, or MetE, C-terminal domain_like. Many members have been characterized as 5-methyltetrahydropteroyltriglutamate-homocysteine methyltransferases, EC:2.1.1.14, mostly from bacteria and plants. This enzyme catalyses the last step in the production of methionine by transferring a methyl group from 5-methyltetrahydrofolate to L-homocysteine without using an intermediate methyl carrier. The active enzyme has a dual (beta-alpha)8-barrel structure, and this model covers the C-terminal barrel, and a few single-barrel sequences most similar to the C-terminal barrel. It is assumed that the homologous N-terminal barrel has evolved from the C-terminus via gene duplication and has subsequently lost binding sites, and it seems as if the two barrels forming the active enzyme may sometimes reside on different polypeptides. The C-terminal domain incorporates the Zinc ion, which binds and activates homocysteine. Sidechains from
Probab=25.65 E-value=2.3e+02 Score=26.64 Aligned_cols=37 Identities=22% Similarity=0.266 Sum_probs=29.1
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCCCC
Q 019673 190 SLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPLGC 227 (337)
Q Consensus 190 ~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpplgc 227 (337)
+..+++.+++..+.+.++.|+++|++ ++.+.=|.+..
T Consensus 145 ~~~el~~~la~~~~~e~~~l~~aG~~-~iQiDEP~l~~ 181 (332)
T cd03311 145 SREELAMDLALALREEIRDLYDAGCR-YIQIDEPALAE 181 (332)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHcCCC-EEEeecchhhc
Confidence 45678999999999999999999996 55555555543
No 74
>PRK07807 inosine 5-monophosphate dehydrogenase; Validated
Probab=25.36 E-value=1e+02 Score=31.01 Aligned_cols=60 Identities=13% Similarity=0.157 Sum_probs=43.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEec--
Q 019673 200 SEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNT-- 277 (337)
Q Consensus 200 ~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~-- 277 (337)
.++.+.++.|.+.|++-++| .. +..|+..+.++++++++++|+..|+-.|+
T Consensus 226 ~~~~~~a~~Lv~aGvd~i~~-D~--------------------------a~~~~~~~~~~i~~ik~~~p~~~v~agnv~t 278 (479)
T PRK07807 226 GDVAAKARALLEAGVDVLVV-DT--------------------------AHGHQEKMLEALRAVRALDPGVPIVAGNVVT 278 (479)
T ss_pred hhHHHHHHHHHHhCCCEEEE-ec--------------------------cCCccHHHHHHHHHHHHHCCCCeEEeeccCC
Confidence 46778889999999987555 32 12457788889999999999988877454
Q ss_pred cHHHHHHHH
Q 019673 278 GKMQYNFIS 286 (337)
Q Consensus 278 ~~~~~~ii~ 286 (337)
.....++++
T Consensus 279 ~~~a~~l~~ 287 (479)
T PRK07807 279 AEGTRDLVE 287 (479)
T ss_pred HHHHHHHHH
Confidence 444555555
No 75
>PRK00129 upp uracil phosphoribosyltransferase; Reviewed
Probab=25.11 E-value=2.1e+02 Score=25.18 Aligned_cols=49 Identities=12% Similarity=0.027 Sum_probs=35.3
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeCCCCCCCchhhhhhcCCCCCcHHHHHHHHHHHHHHHHHHHHHHHhhcCCceEEEEecc
Q 019673 199 ISEYRKLLTRLYDLGARRVLVTGTGPLGCVPAERAMRGRNGQCAADLQRAADLYNPQLVQLVKDLNSQYGSEIFVAVNTG 278 (337)
Q Consensus 199 v~~i~~~v~~L~~~GAr~~vV~~lpplgc~P~~~~~~~~~~~c~~~~n~~~~~~N~~L~~~l~~l~~~~p~~~i~~~D~~ 278 (337)
-..+..+++.|.+.|+++|.+..+ +. + ...++.+.+++|+++|+..-+-
T Consensus 137 G~Tl~~ai~~L~~~G~~~I~~~~l--l~--------------~---------------~~gl~~l~~~~p~v~i~~~~iD 185 (209)
T PRK00129 137 GGSAIAAIDLLKKRGAKNIKVLCL--VA--------------A---------------PEGIKALEEAHPDVEIYTAAID 185 (209)
T ss_pred hHHHHHHHHHHHHcCCCEEEEEEE--ec--------------C---------------HHHHHHHHHHCCCcEEEEEeec
Confidence 356778899999999999988776 11 1 2345567778899998876443
No 76
>PF02896 PEP-utilizers_C: PEP-utilising enzyme, TIM barrel domain; InterPro: IPR000121 A number of enzymes that catalyze the transfer of a phosphoryl group from phosphoenolpyruvate (PEP) via a phospho-histidine intermediate have been shown to be structurally related [, , , ]. All these enzymes share the same catalytic mechanism: they bind PEP and transfer the phosphoryl group from it to a histidine residue. The sequence around that residue is highly conserved. This domain is often found associated with the pyruvate phosphate dikinase, PEP/pyruvate-binding domain (IPR002192 from INTERPRO) at its N terminus and the PEP-utilizing enzyme mobile domain.; GO: 0016772 transferase activity, transferring phosphorus-containing groups, 0016310 phosphorylation; PDB: 2HRO_A 2OLS_A 2DIK_A 2R82_A 1JDE_A 1DIK_A 1GGO_A 1KBL_A 1KC7_A 2BG5_B ....
Probab=25.04 E-value=1.1e+02 Score=28.82 Aligned_cols=18 Identities=17% Similarity=0.327 Sum_probs=13.4
Q ss_pred cCcEEEEEeccchhhhhh
Q 019673 160 NGALILITVGGNDFVNNY 177 (337)
Q Consensus 160 ~~sL~~i~iG~ND~~~~~ 177 (337)
.+-.=+++||.||.....
T Consensus 195 ~~~~DF~SIGtNDLtQy~ 212 (293)
T PF02896_consen 195 AKEVDFFSIGTNDLTQYT 212 (293)
T ss_dssp HTTSSEEEEEHHHHHHHH
T ss_pred HHHCCEEEEChhHHHHHH
Confidence 344568899999998643
No 77
>PRK06233 hypothetical protein; Provisional
Probab=24.41 E-value=1.2e+02 Score=29.44 Aligned_cols=35 Identities=29% Similarity=0.544 Sum_probs=29.0
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCCC
Q 019673 190 SLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGPL 225 (337)
Q Consensus 190 ~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lppl 225 (337)
+..+++.+++..+++.++.|+++|+|.|-+ .=|.+
T Consensus 161 ~~eel~~dlA~a~~~Ei~~L~~aG~~~IQi-DeP~~ 195 (372)
T PRK06233 161 SWDDYLDDLAQAYHDTIQHFYDLGARYIQL-DDTTW 195 (372)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHCCCCEEEE-cCCCH
Confidence 457889999999999999999999998665 44544
No 78
>PRK12454 carbamate kinase-like carbamoyl phosphate synthetase; Reviewed
Probab=20.85 E-value=6.7e+02 Score=23.81 Aligned_cols=52 Identities=23% Similarity=0.413 Sum_probs=36.3
Q ss_pred EEEEEeccchhhhhhccccCCCcCCCCChhHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCCC
Q 019673 163 LILITVGGNDFVNNYYLVPYSARSRQFSLPDYVKYVISEYRKLLTRLYDLGARRVLVTGTGP 224 (337)
Q Consensus 163 L~~i~iG~ND~~~~~~~~~~~~~~~~~~~~~~v~~vv~~i~~~v~~L~~~GAr~~vV~~lpp 224 (337)
.++|-.|+|-+... +.. ...+..-..+....+.|.+|.+.|.+=+++.+..|
T Consensus 4 ~ivvalgGnAl~~~-------~~~---~~~~~q~~~v~~~a~~i~~~~~~g~~vvi~hGnGp 55 (313)
T PRK12454 4 RIVIALGGNALLQP-------GEK---GTAENQMKNVRKTAKQIADLIEEGYEVVITHGNGP 55 (313)
T ss_pred eEEEEeChHHhCCC-------CCC---CcchHHHHHHHHHHHHHHHHHHcCCEEEEEECCCh
Confidence 36778999998631 111 11122225778888889999999999899998887
No 79
>cd03413 CbiK_C Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), C-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases, and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=20.43 E-value=1.2e+02 Score=23.65 Aligned_cols=18 Identities=22% Similarity=0.464 Sum_probs=14.2
Q ss_pred HHHHHHHHHcCCcEEEEe
Q 019673 203 RKLLTRLYDLGARRVLVT 220 (337)
Q Consensus 203 ~~~v~~L~~~GAr~~vV~ 220 (337)
.+.+++|.+.|+|+|++.
T Consensus 45 ~~~l~~l~~~G~~~i~lv 62 (103)
T cd03413 45 DDVLAKLKKAGIKKVTLM 62 (103)
T ss_pred HHHHHHHHHcCCCEEEEE
Confidence 445678899999998874
No 80
>KOG0907 consensus Thioredoxin [Posttranslational modification, protein turnover, chaperones]
Probab=20.13 E-value=1.4e+02 Score=23.39 Aligned_cols=37 Identities=14% Similarity=0.293 Sum_probs=26.7
Q ss_pred HHHHHHHHHhhcCCceEEEEeccHHHHHHHHCcccCCCcCC
Q 019673 256 LVQLVKDLNSQYGSEIFVAVNTGKMQYNFISNPRAFGMLTN 296 (337)
Q Consensus 256 L~~~l~~l~~~~p~~~i~~~D~~~~~~~ii~nP~~yGf~~~ 296 (337)
+.-.+.+|..+||++.++-+|+.. ..++.+ +|+....
T Consensus 39 i~P~~~~La~~y~~v~Flkvdvde-~~~~~~---~~~V~~~ 75 (106)
T KOG0907|consen 39 IAPKFEKLAEKYPDVVFLKVDVDE-LEEVAK---EFNVKAM 75 (106)
T ss_pred hhhHHHHHHHHCCCCEEEEEeccc-CHhHHH---hcCceEe
Confidence 445888999999999999999998 444433 4555443
Done!