BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019675
MAASVDTIESPSQVNRQEVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKALNGQ
KRENKEESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIFH
SNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNESSDDQGDDSQKKDGPSPKDKIMKKAK
NLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDDLVRLQ
LEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGMYLDFSSPSSA
KSGETGNDADYQGIQTPRTNIFDLPSTSFNESFREEP

High Scoring Gene Products

Symbol, full name Information P value
AT4G02800 protein from Arabidopsis thaliana 3.0e-85
AT1G30050 protein from Arabidopsis thaliana 3.8e-33
AT5G01970 protein from Arabidopsis thaliana 1.0e-29
AT2G30530 protein from Arabidopsis thaliana 4.7e-29

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019675
        (337 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2140195 - symbol:AT4G02800 "AT4G02800" species...   853  3.0e-85   1
TAIR|locus:2198264 - symbol:AT1G30050 "AT1G30050" species...   317  3.8e-33   2
TAIR|locus:2185098 - symbol:AT5G01970 species:3702 "Arabi...   329  1.0e-29   1
TAIR|locus:2064342 - symbol:AT2G30530 species:3702 "Arabi...   282  4.7e-29   2


>TAIR|locus:2140195 [details] [associations]
            symbol:AT4G02800 "AT4G02800" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] [GO:0000226 "microtubule cytoskeleton organization"
            evidence=RCA] [GO:0000911 "cytokinesis by cell plate formation"
            evidence=RCA] [GO:0016572 "histone phosphorylation" evidence=RCA]
            [GO:0042127 "regulation of cell proliferation" evidence=RCA]
            EMBL:CP002687 EMBL:AL161495 EMBL:AC004044 EMBL:AY088172
            EMBL:BT029202 IPI:IPI00528045 PIR:F85035 RefSeq:NP_567246.1
            UniGene:At.3903 STRING:Q9SY05 EnsemblPlants:AT4G02800.1
            GeneID:828171 KEGG:ath:AT4G02800 TAIR:At4g02800
            HOGENOM:HOG000240585 InParanoid:Q9SY05 OMA:ENANLTR PhylomeDB:Q9SY05
            ProtClustDB:CLSN2689302 ArrayExpress:Q9SY05 Genevestigator:Q9SY05
            Uniprot:Q9SY05
        Length = 333

 Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
 Identities = 182/307 (59%), Positives = 225/307 (73%)

Query:     1 MAASVDTIESPSQVNRQ-------EVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRD 53
             MAASV+T  SP+  N +         TSF  +SP  SPSSDKR WSN+R+R+D +LE+  
Sbjct:     1 MAASVET-PSPNHTNNEGTRLNMVSATSFDSSSPSVSPSSDKRLWSNVRNRVDVLLEENS 59

Query:    54 RKALNGQKRENKE--ESSRAKRLKEDSQLLLRGFDSVAHTLSQLYNNLDSALQGARDLAK 111
             +   N +   N    ES R+KR K DS LLL+GFDSV+HTLS L +NLD+ALQG R+LAK
Sbjct:    60 K---NHKPVTNTIAIESERSKRFKNDSMLLLKGFDSVSHTLSLLSSNLDNALQGVRELAK 116

Query:   112 PPTFTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFDSNEXXXXXXXXXXXXXXPSP 171
             PP++++I HSNL  ++  +   +++  +E   KG KRK +S+                 P
Sbjct:   117 PPSYSEILHSNLK-ADQIQRQQKEEDEEEEESKGKKRKHESD---VEQTEDSSNEEEKRP 172

Query:   172 KD-KIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIR 230
             K+ KIMKKAKN+AISMA KA +LARELK+IKSDL F+QERC LLEEEN+RLRDGFVKG+R
Sbjct:   173 KERKIMKKAKNIAISMAAKANSLARELKTIKSDLSFIQERCGLLEEENKRLRDGFVKGVR 232

Query:   231 PEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDLSASYEEFIQGM 290
             PEEDDLVRLQLE LLAEK+RLANENA+LVRENQCLHQ+VEYHQ+TSQDLS SYE+ +QG 
Sbjct:   233 PEEDDLVRLQLEVLLAEKARLANENANLVRENQCLHQMVEYHQITSQDLSPSYEQVVQGF 292

Query:   291 YLDFSSP 297
              LDFSSP
Sbjct:   293 CLDFSSP 299


>TAIR|locus:2198264 [details] [associations]
            symbol:AT1G30050 "AT1G30050" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC022455
            HOGENOM:HOG000241349 EMBL:DQ132672 IPI:IPI00517663 PIR:D86424
            RefSeq:NP_174297.1 UniGene:At.51832 PaxDb:Q9C8R6 PRIDE:Q9C8R6
            EnsemblPlants:AT1G30050.1 GeneID:839884 KEGG:ath:AT1G30050
            TAIR:At1g30050 eggNOG:NOG300408 InParanoid:Q9C8R6 OMA:AYEDKSE
            PhylomeDB:Q9C8R6 ProtClustDB:CLSN2914493 Genevestigator:Q9C8R6
            Uniprot:Q9C8R6
        Length = 389

 Score = 317 (116.6 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
 Identities = 62/112 (55%), Positives = 87/112 (77%)

Query:   169 PSPKDKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKG 228
             P+P++  +K ++++A++ A KA  L RELK++K+DL F +ERC+ LEEEN+RLRD   KG
Sbjct:   179 PNPRESQLKASRDVAMATAAKAKLLLRELKTVKADLAFAKERCSQLEEENKRLRDNRDKG 238

Query:   229 IR-PEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDL 279
                P +DDL+RLQLE LLAEK+RLA+EN+   REN+ L ++VEYHQLT QD+
Sbjct:   239 NNNPADDDLIRLQLETLLAEKARLAHENSIYARENRFLREIVEYHQLTMQDV 290

 Score = 60 (26.2 bits), Expect = 3.8e-33, Sum P(2) = 3.8e-33
 Identities = 21/113 (18%), Positives = 48/113 (42%)

Query:    29 YSPSSDKR-YWSNLRSRIDSILEDRDRKALNGQKRENKEESSRAKRLKEDSQLLLRGFDS 87
             Y   S+ R +W  L  +  SILED +      Q+++ ++++      +  +  + +  D 
Sbjct:    69 YEDKSESRGFWGILAQKAKSILEDEEE-----QQQQQQQQNDVI--FEPSNPTIRKSIDK 121

Query:    88 VAHTLSQLYNNLDSALQGARDLAKPPTF---TDIFHSNLNNSENKEEDSRKQQ 137
             +  +L+ + ++ + A +  R +         +D+  S+ NN       S   Q
Sbjct:   122 ITTSLNHIGDSFEKAFEEGRTIVASQIRRKGSDLIDSDNNNYHQSSGSSSPWQ 174


>TAIR|locus:2185098 [details] [associations]
            symbol:AT5G01970 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AL162508 UniGene:At.28192
            HOGENOM:HOG000241349 UniGene:At.48970 UniGene:At.71061
            EMBL:AY072408 EMBL:BT000237 IPI:IPI00547160 PIR:T48218
            RefSeq:NP_195817.1 IntAct:Q9LZN4 PRIDE:Q9LZN4
            EnsemblPlants:AT5G01970.1 GeneID:830706 KEGG:ath:AT5G01970
            TAIR:At5g01970 eggNOG:NOG282596 InParanoid:Q9LZN4 OMA:FATFKEE
            PhylomeDB:Q9LZN4 ProtClustDB:CLSN2916743 ArrayExpress:Q9LZN4
            Genevestigator:Q9LZN4 Uniprot:Q9LZN4
        Length = 351

 Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
 Identities = 81/249 (32%), Positives = 129/249 (51%)

Query:    35 KRYWSNLRSRIDSILED---RDRKALNGQKRENKEESSRAKRLKEDSQLLLRGFDSVAHT 91
             K  W  +  +  S++ED    DR     Q R +       K++  D+  L RG D +  +
Sbjct:    56 KGLWGVIAQKAKSVIEDDKSSDRSTTASQSRFSYLSDEGFKKM--DNPKLRRGLDKLTSS 113

Query:    92 LSQLYNNLDSALQGARDLAKPPTFTDIFHSNLNNSENKEEDSRKQQHQEGNKKGLKRKFD 151
             L+Q+ +  + A +  R L +  T  DI        + +   +  +   +    G+   + 
Sbjct:   114 LNQIGDTFEKAFEDGRTLVENKT-ADIIQET-RKLQTRRRGTGGEDENQNQSYGVSSSWK 171

Query:   152 SNEXXXXXXXXXXXXXXPSPKDKIMKKAKNLAISMATKAATLARELKSIKSDLCFMQERC 211
              +                      +K ++++A++ A KA  L RELK++K+DL F +ERC
Sbjct:   172 KSPEQPMQLNHIEHETQ-------LKASRDVAMATAAKAKLLLRELKTVKADLAFAKERC 224

Query:   212 TLLEEENRRLRDGF-VKGIRPEEDDLVRLQLEALLAEKSRLANENASLVRENQCLHQLVE 270
               LEEEN+ LR+    KG  P ++DL+RLQLE+LLAEK+RLA+EN+   REN+ L ++VE
Sbjct:   225 AQLEEENKHLRESHREKGSNPADEDLIRLQLESLLAEKARLAHENSVYARENRFLREIVE 284

Query:   271 YHQLTSQDL 279
             YHQLT QD+
Sbjct:   285 YHQLTMQDV 293


>TAIR|locus:2064342 [details] [associations]
            symbol:AT2G30530 species:3702 "Arabidopsis thaliana"
            [GO:0005634 "nucleus" evidence=ISM] EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:U93215 EMBL:AY052678 EMBL:AY063732
            IPI:IPI00542613 PIR:E84709 RefSeq:NP_565700.1 UniGene:At.14722
            IntAct:O04342 PaxDb:O04342 PRIDE:O04342 EnsemblPlants:AT2G30530.1
            GeneID:817602 KEGG:ath:AT2G30530 TAIR:At2g30530 eggNOG:NOG284420
            HOGENOM:HOG000241349 InParanoid:O04342 OMA:YEYTSMK PhylomeDB:O04342
            ProtClustDB:CLSN2917192 ArrayExpress:O04342 Genevestigator:O04342
            Uniprot:O04342
        Length = 371

 Score = 282 (104.3 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
 Identities = 63/128 (49%), Positives = 87/128 (67%)

Query:   176 MKKAKNLAISMATKAATLARELKSIKSDLCFMQERCTLLEEENRRLRDGFVKGIRPEEDD 235
             +K ++++A++MA KA  L RELK +KSDL F ++RC  LEEEN+ LR+      + ++DD
Sbjct:   229 LKASRDVAMAMAAKAKLLLRELKMVKSDLAFAKQRCAQLEEENKVLRENRSGDSQTDDDD 288

Query:   236 LVRLQLEALLAEKSRLANENASLVRENQCLHQLVEYHQLTSQDL---SASYEEFIQGMYL 292
             LVRLQLE LLAEK+RLA+EN+   REN  L  +VEYHQLT QD+       EE  +   +
Sbjct:   289 LVRLQLETLLAEKARLAHENSIYTRENLYLRGVVEYHQLTMQDVVYFDEKTEEVTEVYPI 348

Query:   293 DFSSPSSA 300
             + SS SS+
Sbjct:   349 NVSSMSSS 356

 Score = 56 (24.8 bits), Expect = 4.7e-29, Sum P(2) = 4.7e-29
 Identities = 32/141 (22%), Positives = 55/141 (39%)

Query:    11 PSQVNRQ-EVTSFMGTSPLYSPSSDKRYWSNLRSRIDSILEDRDRKAL-NGQKR-ENKEE 67
             P +VN+  E TS      L  P   + +W +L S+  + L++ D   L    KR E    
Sbjct:    86 PKEVNKAYEYTSMKS---LNEPK--RGFWGSLASKAKAFLDEDDPNQLPQSPKRMEQSIP 140

Query:    68 SSRAKRLKEDSQL--------LLRGFDSVAHTLSQLYNNLDSALQGARDLAKPPTFTDIF 119
             S+     KE  Q         L R  D++  +L+ +   + + ++      +  T   I 
Sbjct:   141 SATTSGTKEAGQTGRKSENPSLQRRLDAITSSLNYIGGTIGTVVEEGITAVENRT-AGII 199

Query:   120 HSNLNNSENKEEDSRKQQHQE 140
                    + K   +R QQ+ E
Sbjct:   200 QETRKKIKKKPSLTRNQQNPE 220


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.126   0.343    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      337       323   0.00086  116 3  11 23  0.48    34
                                                     33  0.45    37


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  4
  No. of states in DFA:  598 (64 KB)
  Total size of DFA:  198 KB (2112 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  40.50u 0.13s 40.63t   Elapsed:  00:00:01
  Total cpu time:  40.51u 0.13s 40.64t   Elapsed:  00:00:01
  Start:  Mon May 20 19:39:24 2013   End:  Mon May 20 19:39:25 2013

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