BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019676
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q8H0W1|PLSP1_ARATH Chloroplast processing peptidase OS=Arabidopsis thaliana GN=PLSP1
PE=2 SV=2
Length = 291
Score = 340 bits (872), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 182/265 (68%), Positives = 201/265 (75%), Gaps = 11/265 (4%)
Query: 72 NPNFVNF----QHQNPRPLN---PKNLLYR-LNCNKLKSSGEETKSVVNTGSGGGGGGDG 123
NPNF+ F Q P+ LN NL R L+C +K S E TKS S G G G
Sbjct: 30 NPNFIQFTPKSQLLFPQRLNFNTGTNLNRRTLSCYGIKDSSETTKS---APSLDSGDGGG 86
Query: 124 GGGDGSDDEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPT 183
G G D E E ++ P WL+ TSDDA+TV A+ +SLAFR F+AEPRYIPSLSMYPT
Sbjct: 87 GDGGDDDKGEVEEKNRLFPEWLDFTSDDAQTVFVAIAVSLAFRYFIAEPRYIPSLSMYPT 146
Query: 184 FDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVRE 243
FDVGDR+VAEKV+YYFRKPC+NDIVIFKSPPVLQEVGYTD DVFIKR+VAKEGD+VEV
Sbjct: 147 FDVGDRLVAEKVSYYFRKPCANDIVIFKSPPVLQEVGYTDADVFIKRIVAKEGDLVEVHN 206
Query: 244 GKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGR 303
GKL+VNGV RNE +ILE P Y MTPI VPENSVFVMGDNRNNSYDSHVWGPLP KNIIGR
Sbjct: 207 GKLMVNGVARNEKFILEPPGYEMTPIRVPENSVFVMGDNRNNSYDSHVWGPLPLKNIIGR 266
Query: 304 SVFRYWPPQRIGSTVPEGGCAVDSQ 328
SVFRYWPP R+ TV EGGCAVD Q
Sbjct: 267 SVFRYWPPNRVSGTVLEGGCAVDKQ 291
>sp|O04348|TPP1_ARATH Thylakoidal processing peptidase 1, chloroplastic OS=Arabidopsis
thaliana GN=TPP1 PE=2 SV=2
Length = 340
Score = 241 bits (616), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 152/204 (74%), Gaps = 8/204 (3%)
Query: 122 DGGGGDGSDDEEAEGQSGALPGWLN----ITSDDAKTVLAALVISLAFRSFVAEPRYIPS 177
D GG DD++ E ++G GW+N + S+DAK A+ +S+ FRS +AEP+ IPS
Sbjct: 124 DKGGTVCDDDDDKESRNGG-SGWVNKLLSVCSEDAKAAFTAVTVSILFRSALAEPKSIPS 182
Query: 178 LSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEV---GYTDDDVFIKRVVAK 234
SMYPT D GDR++AEKV+Y+FRKP +DIVIFK+PP+L E GY+ +DVFIKR+VA
Sbjct: 183 TSMYPTLDKGDRVMAEKVSYFFRKPEVSDIVIFKAPPILLEYPEYGYSSNDVFIKRIVAS 242
Query: 235 EGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGP 294
EGD VEVR+GKL VN +V+ ED++LE SY M P+ VP+ VFV+GDNRN S+DSH WGP
Sbjct: 243 EGDWVEVRDGKLFVNDIVQEEDFVLEPMSYEMEPMFVPKGYVFVLGDNRNKSFDSHNWGP 302
Query: 295 LPAKNIIGRSVFRYWPPQRIGSTV 318
LP +NI+GRSVFRYWPP ++ T+
Sbjct: 303 LPIENIVGRSVFRYWPPSKVSDTI 326
>sp|Q9M9Z2|TPP2_ARATH Probable thylakoidal processing peptidase 2, chloroplastic
OS=Arabidopsis thaliana GN=TPP2 PE=2 SV=1
Length = 367
Score = 238 bits (607), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 113/188 (60%), Positives = 142/188 (75%)
Query: 131 DEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRI 190
D+ + G +G + LNI S+DAK A+ +SL FRS +AEP+ IPS SM PT DVGDR+
Sbjct: 166 DKVSNGGNGWVNKLLNICSEDAKAAFTAVTVSLLFRSALAEPKSIPSTSMLPTLDVGDRV 225
Query: 191 VAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG 250
+AEKV+Y+FRKP +DIVIFK+PP+L E GY+ DVFIKR+VA EGD VEV +GKL+VN
Sbjct: 226 IAEKVSYFFRKPEVSDIVIFKAPPILVEHGYSCADVFIKRIVASEGDWVEVCDGKLLVND 285
Query: 251 VVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
V+ ED++LE Y M P+ VPE VFV+GDNRN S+DSH WGPLP KNIIGRSVFRYWP
Sbjct: 286 TVQAEDFVLEPIDYEMEPMFVPEGYVFVLGDNRNKSFDSHNWGPLPIKNIIGRSVFRYWP 345
Query: 311 PQRIGSTV 318
P ++ +
Sbjct: 346 PSKVSDII 353
>sp|P72660|LEP1_SYNY3 Probable signal peptidase I-1 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB1 PE=3 SV=1
Length = 196
Score = 167 bits (424), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 83/151 (54%), Positives = 102/151 (67%)
Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
R FVAEPRYIPS SM PT + GDR+V EKV+Y+F P DI++F P +LQ GY
Sbjct: 31 RFFVAEPRYIPSDSMLPTLEQGDRLVVEKVSYHFHPPQVGDIIVFHPPELLQVQGYDLGQ 90
Query: 226 VFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNN 285
FIKRV+A G VEV G + +G E+YILE P YN+ + VP+ VFVMGDNRNN
Sbjct: 91 AFIKRVIALPGQTVEVNNGIVYRDGQPLQEEYILEPPQYNLPAVRVPDGQVFVMGDNRNN 150
Query: 286 SYDSHVWGPLPAKNIIGRSVFRYWPPQRIGS 316
S DSHVWG LP +NIIG ++FR++P R G
Sbjct: 151 SNDSHVWGFLPQQNIIGHALFRFFPASRWGQ 181
>sp|Q51876|LEP_PHOLA Signal peptidase I OS=Phormidium laminosum GN=lepB PE=3 SV=1
Length = 203
Score = 165 bits (418), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 77/170 (45%), Positives = 112/170 (65%)
Query: 150 DDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVI 209
+ KT+ ++V++L R+FVAE RYIPS SM PT +V DR++ EK++Y+F P DI++
Sbjct: 30 EGIKTIGLSVVLALGIRTFVAEARYIPSESMLPTLEVNDRLIVEKISYHFNPPRRGDIIV 89
Query: 210 FKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPI 269
F L++ + ++ FIKRV+ G+ V+V G++++NG E+YI P Y P
Sbjct: 90 FHPTEALKQQNPSLNEAFIKRVIGLPGETVQVTGGRVLINGQPLEENYIQSPPDYQWGPE 149
Query: 270 TVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIGSTVP 319
VP +S V+GDNRNNSYDSH WG +P +NIIGR+V R+WP R+G P
Sbjct: 150 KVPADSFLVLGDNRNNSYDSHFWGYVPRQNIIGRAVVRFWPVNRLGELGP 199
>sp|P73157|LEP2_SYNY3 Probable signal peptidase I-2 OS=Synechocystis sp. (strain PCC 6803
/ Kazusa) GN=lepB2 PE=3 SV=1
Length = 218
Score = 157 bits (396), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 110/172 (63%), Gaps = 6/172 (3%)
Query: 144 WLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPC 203
WL + KT++ A+++++ R+FVAE RYIPS SM PT + DR++ EK++Y R P
Sbjct: 21 WLEL----GKTMVTAVILAIGIRTFVAEARYIPSSSMEPTLQINDRLIIEKISYRLRDPE 76
Query: 204 SNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPS 263
+IV+F L+ + D FIKR++ GD V V +G + VNG + +E+YI P+
Sbjct: 77 RGEIVVFNPTDALKAKNF--HDAFIKRIIGLPGDEVRVSQGNVYVNGKMLDENYIAAPPA 134
Query: 264 YNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIG 315
Y P+ VP++ V+GDNRNNSYDSH WG +P + ++GR+ R+WP R+G
Sbjct: 135 YEYGPVKVPDDQYLVLGDNRNNSYDSHYWGFVPREKLLGRAFVRFWPVPRVG 186
>sp|Q10789|LEP_MYCTU Signal peptidase I OS=Mycobacterium tuberculosis GN=lepB PE=1 SV=1
Length = 294
Score = 95.5 bits (236), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/236 (30%), Positives = 104/236 (44%), Gaps = 51/236 (21%)
Query: 131 DEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFD----- 185
D +A P + + A + A+V+ +FVA P IPS SM PT
Sbjct: 48 DSKAAKTDEPRPAKRSTLREFAVLAVIAVVLYYVMLTFVARPYLIPSESMEPTLHGCSTC 107
Query: 186 VGDRIVAEKVTYYFRKPCSNDIVIFKSPP---------------------VLQEVGYT-- 222
VGDRI+ +K++Y F P D+++F+ PP L +G+
Sbjct: 108 VGDRIMVDKLSYRFGSPQPGDVIVFRGPPSWNVGYKSIRSHNVAVRWVQNALSFIGFVPP 167
Query: 223 DDDVFIKRVVAKEGDVVEVR-EGKLIVNGVVRNEDYI-----LEAPSY------NMTPIT 270
D++ +KRV+A G V+ R + L VNG E Y+ + PS P+T
Sbjct: 168 DENDLVKRVIAVGGQTVQCRSDTGLTVNGRPLKEPYLDPATMMADPSIYPCLGSEFGPVT 227
Query: 271 VPENSVFVMGDNRNNSYDSHVWGPL-----------PAKNIIGRSVFRYWPPQRIG 315
VP V+VMGDNR +S DS PL P N+IG++ WPP R G
Sbjct: 228 VPPGRVWVMGDNRTHSADSRAHCPLLCTDDPLPGTVPVANVIGKARLIVWPPSRWG 283
>sp|O33021|LEP_MYCLE Probable signal peptidase I OS=Mycobacterium leprae (strain TN)
GN=lepB PE=3 SV=1
Length = 289
Score = 91.7 bits (226), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 70/222 (31%), Positives = 97/222 (43%), Gaps = 60/222 (27%)
Query: 154 TVLAALVISLAF--RSFVAEPRYIPSLSMYPTFD-----VGDRIVAEKVTYYFRKPCSND 206
+LA + I L + +FVA P IPS SM PT VGDRI+ +K+TY F P D
Sbjct: 57 AILAVIAIGLYYVMLTFVARPYLIPSESMEPTLHGCSGCVGDRIMVDKITYRFSSPQPGD 116
Query: 207 IVIFKSPP---------------------VLQEVGYT--DDDVFIKRVVAKEGDVVEVR- 242
+++FK PP L VG+ D++ +KRV+A G V+ R
Sbjct: 117 VIVFKGPPSWNTMYKSIRSNNIVLRSVQNALSFVGFVPPDENDLVKRVIAVGGQTVQCRS 176
Query: 243 EGKLIVNGVVRNEDYILEAP-----------SYNMTPITVPENSVFVMGDNRNNSYDSHV 291
+ L VNG E Y+ P+TVP+ ++VMGDNR +S DS
Sbjct: 177 DTGLTVNGKPLKEPYLRPVTMNADLSFSPCLGSEFGPVTVPQGRLWVMGDNRIHSADSRY 236
Query: 292 W------------------GPLPAKNIIGRSVFRYWPPQRIG 315
G +P N+IG++ WPP R G
Sbjct: 237 HCNSTDVVNGLSCTGDPNSGTVPVSNVIGKARVVVWPPSRWG 278
>sp|P71013|LEPT_BACSU Signal peptidase I T OS=Bacillus subtilis (strain 168) GN=sipT PE=1
SV=1
Length = 193
Score = 82.8 bits (203), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 19/177 (10%)
Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFK 211
K ++ A++++L R F+ EP + SMYPT G+R+ K Y + DIVI
Sbjct: 24 GKAIVIAVLLALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKTVNYIGELKRGDIVIIN 83
Query: 212 SPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYI----LEAPSYNMT 267
G T ++KR++ K G+ V++++ L +NG E Y+ EA ++
Sbjct: 84 --------GETSKIHYVKRLIGKPGETVQMKDDTLYINGKKVAEPYLSKNKKEAEKLGVS 135
Query: 268 ------PITVPENSVFVMGDNRNNSYDSH-VWGPLPAKNIIGRSVFRYWPPQRIGST 317
P+ VP+ FVMGDNR NS DS G + I+G S F ++P + T
Sbjct: 136 LTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAEDRIVGTSKFVFFPFNEMRQT 192
>sp|P28628|LEPS_BACSU Signal peptidase I S OS=Bacillus subtilis (strain 168) GN=sipS PE=1
SV=1
Length = 184
Score = 82.4 bits (202), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 85/178 (47%), Gaps = 22/178 (12%)
Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFK 211
AK ++ A+V++L R+F+ P + SMYPT +R+ Y + DIV+
Sbjct: 16 AKAIVIAVVLALLIRNFIFAPYVVDGDSMYPTLHNRERVFVNMTVKYIGEFDRGDIVVLN 75
Query: 212 SPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYI-----------LE 260
DD ++KR++ GD VE++ +L +NG +E Y+ +
Sbjct: 76 G----------DDVHYVKRIIGLPGDTVEMKNDQLYINGKKVDEPYLAANKKRAKQDGFD 125
Query: 261 APSYNMTPITVPENSVFVMGDNRNNSYDS-HVWGPLPAKNIIGRSVFRYWPPQRIGST 317
+ + P+ VP+N FVMGDNR NS DS + G K I G S F ++P + T
Sbjct: 126 HLTDDFGPVKVPDNKYFVMGDNRRNSMDSRNGLGLFTKKQIAGTSKFVFYPFNEMRKT 183
>sp|P41025|LEP2_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipS2 PE=3 SV=1
Length = 193
Score = 82.4 bits (202), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 87/177 (49%), Gaps = 19/177 (10%)
Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFK 211
K ++ A+ ++L R F+ EP + SMYPT G+R+ K Y + DIVI
Sbjct: 24 GKAIIIAVALALLIRHFLFEPYLVEGSSMYPTLHDGERLFVNKSVNYIGEIERGDIVIIN 83
Query: 212 SPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYIL----EAPSY--N 265
G T ++KR++ K G+ VE++ L +NG E Y+ EA N
Sbjct: 84 --------GDTSKVHYVKRLIGKPGETVEMKNDTLYINGKKIAEPYLASNKKEAKKLGVN 135
Query: 266 MT----PITVPENSVFVMGDNRNNSYDSHVWGPLPAKN-IIGRSVFRYWPPQRIGST 317
+T P+ VP+ FVMGDNR NS DS L A+N I+G S F ++P + T
Sbjct: 136 LTGDFGPVKVPKGKYFVMGDNRLNSMDSRNGLGLIAENRIVGTSKFVFFPFHDMRQT 192
>sp|Q57350|LEPQ_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=3
SV=1
Length = 185
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 89/195 (45%), Gaps = 27/195 (13%)
Query: 131 DEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRI 190
D+E +S + W+ K +L AL++ R+F+ EP + SM PT +R+
Sbjct: 3 DKEKRKKSNIID-WI-------KAILIALILVFLVRTFLFEPYIVQGESMKPTLFNSERL 54
Query: 191 VAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG 250
K Y DIV+ G ++KR++ GD +E++ L VNG
Sbjct: 55 FVNKFVKYTGDFKRGDIVVLN--------GEEKKTHYVKRLIGLPGDTIEMKNDNLFVNG 106
Query: 251 VVRNEDYILEAPS------YNMT----PITVPENSVFVMGDNRNNSYDSHV-WGPLPAKN 299
NE+Y+ E N+T PI VP++ FVMGDNR NS DS G K+
Sbjct: 107 KRFNEEYLKENKKDAHDSDLNLTGDFGPIKVPKDKYFVMGDNRQNSMDSRNGLGLFNKKD 166
Query: 300 IIGRSVFRYWPPQRI 314
I+G ++P RI
Sbjct: 167 IVGVEELVFFPLDRI 181
>sp|P42668|LEP_BACLI Signal peptidase I OS=Bacillus licheniformis GN=lepB PE=3 SV=1
Length = 186
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 94/198 (47%), Gaps = 26/198 (13%)
Query: 131 DEEAEGQSGALPGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRI 190
+E++ + +L W+ K ++ A+V++L R+F+ EP + SM PT G+R+
Sbjct: 3 EEKSTNKKNSLFEWV-------KAIIIAVVLALLIRAFLFEPYLVEGTSMDPTLHDGERL 55
Query: 191 VAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG 250
K Y + DIVI + V Y +KR++ GD V++++ L +NG
Sbjct: 56 FVYKTVRYVGEFKRGDIVIIDGDE--KNVHY------VKRLIGLPGDTVQMKDDTLYING 107
Query: 251 VVRNEDYI------LEAPSYNMT----PITVPENSVFVMGDNRNNSYDSH-VWGPLPAKN 299
+E Y+ EA +T P+ VPE FVMGDNR S DS G + K
Sbjct: 108 KKVSEPYLSENRKEAEAVGVKLTGDFGPVKVPEGKYFVMGDNRQRSMDSRNGLGLIDKKR 167
Query: 300 IIGRSVFRYWPPQRIGST 317
+ G S F ++P I T
Sbjct: 168 VAGTSQFVFFPFNEIRKT 185
>sp|Q9I5G7|LEP_PSEAE Signal peptidase I OS=Pseudomonas aeruginosa (strain ATCC 15692 /
PAO1 / 1C / PRS 101 / LMG 12228) GN=lepB PE=3 SV=1
Length = 284
Score = 80.5 bits (197), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/213 (30%), Positives = 94/213 (44%), Gaps = 62/213 (29%)
Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSN------ 205
K+ L I L RSF+ EP IPS SM PT +VGD I+ K Y R P +
Sbjct: 63 GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLEVGDFILVNKFAYGIRLPVLDTKVIPI 122
Query: 206 ------DIVIFKSPPVLQEVGYTDDDV-FIKRVVAKEGDVVE-VREGKLIVNGVVRNEDY 257
D+++F+ P ++ ++ +IKRVV GD V +E +L VNG + E
Sbjct: 123 GDPQRGDVMVFRYP--------SEPNINYIKRVVGLPGDTVRYTKEKRLYVNGELVAEKL 174
Query: 258 ILEAPS-------------------------YNMTP---ITVPENSVFVMGDNRNNSYDS 289
+ E P Y + P T+P F+MGDNR+NS DS
Sbjct: 175 VGEEPGTLGSVTLYQEKLGQAEHLIRKEMSRYRIEPDRQWTIPAGHYFMMGDNRDNSNDS 234
Query: 290 HVW----------GPLPAKNIIGR--SVFRYWP 310
W G +P +NI+G+ +V+ WP
Sbjct: 235 RYWNDPKIPKDLLGMVPDRNIVGKAFAVWMSWP 267
>sp|P26844|LEP_PSEFL Signal peptidase I OS=Pseudomonas fluorescens GN=lepB PE=3 SV=1
Length = 284
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/217 (30%), Positives = 94/217 (43%), Gaps = 62/217 (28%)
Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSN------ 205
K+ L I L RSF+ EP IPS SM PT DVGD I+ K +Y R P +
Sbjct: 63 GKSFFPVLFIVLVLRSFLVEPFQIPSGSMKPTLDVGDFILVNKFSYGIRLPVIDKKVIEV 122
Query: 206 ------DIVIFKSPPVLQEVGYTDDDV-FIKRVVAKEGDVVE-VREGKLIVNGVVRNEDY 257
D+++F+ P +D +V +IKRVV GDVV + +L +NG E
Sbjct: 123 GDPQRGDVMVFRYP--------SDPNVNYIKRVVGLPGDVVRYTSDKRLFINGESVAEKL 174
Query: 258 ILEAPS-------------------------YNMTP---ITVPENSVFVMGDNRNNSYDS 289
+ P+ Y P VP F+MGDNR+NS DS
Sbjct: 175 LGAEPNTLGSAELYQEKLGAVEHEIRKEMSRYRAMPDGQWKVPAGHYFMMGDNRDNSNDS 234
Query: 290 HVW----------GPLPAKNIIGR--SVFRYWPPQRI 314
W G +P +NI+G+ +V+ WP ++
Sbjct: 235 RYWDDPNIPKDLLGMVPDENIVGKAFAVWMSWPEPKL 271
>sp|O67088|LEP_AQUAE Signal peptidase I OS=Aquifex aeolicus (strain VF5) GN=lepB PE=3
SV=1
Length = 256
Score = 76.3 bits (186), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 95/232 (40%), Gaps = 72/232 (31%)
Query: 153 KTVLAALVISLA---FRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVI 209
K ++ +I LA R ++A+ IPS SM PT VGD I+ K+ Y +P D+++
Sbjct: 3 KQIVELFLIILAVLFIREYIAQAYTIPSASMEPTLLVGDFILVNKLVYSLSEPMRGDMIV 62
Query: 210 FKSPPVLQEVGYTDDDVFIKRVVAKEGDVVE----------VREGKLIVNGVVRNEDY-- 257
FK P D FIKR++A+ GD VE V K+ VNG + Y
Sbjct: 63 FKYPK-------NPDIDFIKRIIARGGDTVEFFPYYDEKNNVLIYKVAVNGKLYELTYEG 115
Query: 258 --------------------------------ILEAP-------------SYN----MTP 268
+L+ P YN
Sbjct: 116 EKNYSYDCYQYREKLYREDGEVIQHSVCFRNTLLKVPGMVYNAISSDLCLKYNEDGFCVK 175
Query: 269 ITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIGSTVPE 320
VPE FVMGDNR+NS DS WG +P +NI G++ Y+ ++ S PE
Sbjct: 176 FVVPEGYYFVMGDNRDNSQDSRFWGFVPRENIEGKAFVIYY-SGKVPSLTPE 226
>sp|P41026|LEP1_BACAM Signal peptidase I OS=Bacillus amyloliquefaciens GN=sipA PE=3 SV=1
Length = 185
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 84/179 (46%), Gaps = 21/179 (11%)
Query: 150 DDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVI 209
D AK ++ A+V+++ R+F+ P + SM PT +RI Y IV+
Sbjct: 16 DWAKAIIIAVVLAVLIRNFLFAPYVVDGESMEPTLHDRERIFVNMTVKYISDFKRGQIVV 75
Query: 210 FKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYIL------EAPS 263
+++ ++KR++ GD V+++ +L +NG +E Y+ +
Sbjct: 76 LNG----------ENEHYVKRIIGLPGDTVQMKNDQLYINGKKVSEPYLAANKKKAKQDG 125
Query: 264 YNMT----PITVPENSVFVMGDNRNNSYDSH-VWGPLPAKNIIGRSVFRYWPPQRIGST 317
Y +T P+ VP++ FVMGDNR NS DS G K I G S F ++P I T
Sbjct: 126 YTLTDDFGPVKVPDDKYFVMGDNRRNSMDSRNGLGLFTKKQIAGTSKFVFFPFNEIRKT 184
>sp|O07560|LEPV_BACSU Signal peptidase I V OS=Bacillus subtilis (strain 168) GN=sipV PE=2
SV=1
Length = 168
Score = 72.8 bits (177), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 83/161 (51%), Gaps = 23/161 (14%)
Query: 156 LAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPV 215
+ ++V+++ ++ V + +SM PTF G+ ++ K ++ F+ DIV+FK P
Sbjct: 11 VVSVVLAIQVKNAVFIDYKVEGVSMNPTFQEGNELLVNKFSHRFKTIHRFDIVLFKGP-- 68
Query: 216 LQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPS----------YN 265
D V IKRV+ G+ ++ ++ +L VNG E ++ S ++
Sbjct: 69 -------DHKVLIKRVIGLPGETIKYKDDQLYVNGKQVAEPFLKHLKSVSAGSHVTGDFS 121
Query: 266 MTPIT----VPENSVFVMGDNRNNSYDSHVWGPLPAKNIIG 302
+ +T VP+ FV+GDNR S+DS +GP+ KNI+G
Sbjct: 122 LKDVTGTSKVPKGKYFVVGDNRIYSFDSRHFGPIREKNIVG 162
>sp|Q5HHB9|LEP_STAAC Signal peptidase IB OS=Staphylococcus aureus (strain COL) GN=spsB
PE=3 SV=2
Length = 191
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
++ A VI F+ P I SM PT G+R+ V Y ++V+F +
Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIVGYKTGGLEKGNVVVFHA- 69
Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
+D ++KRV+ GD VE + L VNG ++E DYI
Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121
Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
+ P+ N +P+ V+GDNR S DS +G + I+G+ FR+WP
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>sp|P0A069|LEP_STAAW Signal peptidase IB OS=Staphylococcus aureus (strain MW2) GN=spsB
PE=3 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
++ A VI F+ P I SM PT G+R+ + Y ++V+F +
Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69
Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
+D ++KRV+ GD VE + L VNG ++E DYI
Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121
Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
+ P+ N +P+ V+GDNR S DS +G + I+G+ FR+WP
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>sp|P0A070|LEP_STAAU Signal peptidase IB OS=Staphylococcus aureus GN=spsB PE=3 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
++ A VI F+ P I SM PT G+R+ + Y ++V+F +
Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69
Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
+D ++KRV+ GD VE + L VNG ++E DYI
Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121
Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
+ P+ N +P+ V+GDNR S DS +G + I+G+ FR+WP
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>sp|Q6GAW1|LEP_STAAS Signal peptidase IB OS=Staphylococcus aureus (strain MSSA476)
GN=spsB PE=3 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
++ A VI F+ P I SM PT G+R+ + Y ++V+F +
Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69
Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
+D ++KRV+ GD VE + L VNG ++E DYI
Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121
Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
+ P+ N +P+ V+GDNR S DS +G + I+G+ FR+WP
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>sp|P0A068|LEP_STAAN Signal peptidase IB OS=Staphylococcus aureus (strain N315) GN=spsB
PE=1 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
++ A VI F+ P I SM PT G+R+ + Y ++V+F +
Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69
Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
+D ++KRV+ GD VE + L VNG ++E DYI
Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121
Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
+ P+ N +P+ V+GDNR S DS +G + I+G+ FR+WP
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>sp|P0A067|LEP_STAAM Signal peptidase IB OS=Staphylococcus aureus (strain Mu50 / ATCC
700699) GN=spsB PE=3 SV=1
Length = 191
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
++ A VI F+ P I SM PT G+R+ + Y ++V+F +
Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69
Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
+D ++KRV+ GD VE + L VNG ++E DYI
Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121
Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
+ P+ N +P+ V+GDNR S DS +G + I+G+ FR+WP
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>sp|Q6GIC3|LEP_STAAR Signal peptidase IB OS=Staphylococcus aureus (strain MRSA252)
GN=spsB PE=3 SV=1
Length = 191
Score = 70.1 bits (170), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/175 (28%), Positives = 76/175 (43%), Gaps = 27/175 (15%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
++ A VI F+ P I SM PT G+R+ + Y ++V+F +
Sbjct: 11 SIAVAFVILFIVGKFIVTPYTIKGESMDPTLKDGERVAVNIIGYKTGGLEKGNVVVFHA- 69
Query: 214 PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNE------------DYIL-- 259
+D ++KRV+ GD VE + L VNG ++E DYI
Sbjct: 70 --------NKNDDYVKRVIGVPGDKVEYKNDTLYVNGKKQDEPYLNYNLKHKQGDYITGT 121
Query: 260 ----EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
+ P+ N +P+ V+GDNR S DS +G + I+G+ FR+WP
Sbjct: 122 FQVKDLPNANPKSNVIPKGKYLVLGDNREVSKDSRAFGLIDEDQIVGKVSFRFWP 176
>sp|P37943|LEPP_BACNA Signal peptidase I P OS=Bacillus subtilis subsp. natto GN=sipP PE=1
SV=1
Length = 186
Score = 68.9 bits (167), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 19/170 (11%)
Query: 152 AKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFK 211
K ++ A++++L R+F+ EP + SM PT +R+ K Y DI+I
Sbjct: 17 GKAIVIAVILALLIRNFLFEPYVVEGKSMDPTLVDSERLFVNKTVKYTGNFKRGDIIILN 76
Query: 212 SPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYI------LEAPSYN 265
G ++KR++ GD VE++ L +NG E Y+ + N
Sbjct: 77 --------GKEKSTHYVKRLIGLPGDTVEMKNDHLFINGNEVKEPYLSYNKENAKKVGIN 128
Query: 266 MT----PITVPENSVFVMGDNRNNSYDS-HVWGPLPAKNIIGRSVFRYWP 310
+T PI VP++ FVMGDNR S DS + G +I G F ++P
Sbjct: 129 LTGDFGPIKVPKDKYFVMGDNRQESMDSRNGLGLFTKDDIQGTEEFVFFP 178
>sp|Q89AM6|LEP_BUCBP Signal peptidase I OS=Buchnera aphidicola subsp. Baizongia
pistaciae (strain Bp) GN=lepB PE=3 SV=1
Length = 310
Score = 68.6 bits (166), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 90/224 (40%), Gaps = 76/224 (33%)
Query: 159 LVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSN------------D 206
L+I R+F+ EP IPS SM PT GD I+ +K +Y + P SN D
Sbjct: 62 LIIVFIIRTFICEPFQIPSESMMPTLLPGDFILVKKFSYGIKNPFSNNVIVFINTPKRGD 121
Query: 207 IVIFKSP------PVLQEVGYTDD----DVFIKRVVAKEGDVVEVREGKLIVN------- 249
IV+FK P V + VG D ++ KR+ ++ E + +N
Sbjct: 122 IVVFKHPNNNAINYVKRIVGLPGDKINYNILTKRLTITPNNINEQHTKNISINYKYIKPN 181
Query: 250 ---------GVVRNEDYILEAPSYNMTPI------------------------------- 269
++ N + LE+ + N+ +
Sbjct: 182 DFTKHFKLNNIILNNVHSLESSNNNLLQLEMYQEKIEKIAYNIFFKKKLIDQKDLYFKQF 241
Query: 270 -------TVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVF 306
VP++ FV+GDNR+NS DS WG +P KN+IG+ VF
Sbjct: 242 SQKQGTWIVPKHKYFVLGDNRDNSLDSRYWGFVPEKNLIGKVVF 285
>sp|P44454|LEP_HAEIN Signal peptidase I OS=Haemophilus influenzae (strain ATCC 51907 /
DSM 11121 / KW20 / Rd) GN=lepB PE=3 SV=1
Length = 349
Score = 65.5 bits (158), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/255 (26%), Positives = 98/255 (38%), Gaps = 81/255 (31%)
Query: 148 TSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFR------- 200
S+ ++ L + RSF+ EP IPS SM T VGD +V K Y +
Sbjct: 84 ASEFLSSLFPVLAVVFLVRSFLFEPFQIPSGSMESTLRVGDFLVVNKYAYGVKDPIFQNT 143
Query: 201 -----KPCSNDIVIFKSPP-VLQEVGY--------------TDDDV----FIKRVVAKEG 236
KP D+++FK+P L G + D++ +IKR+V K G
Sbjct: 144 IIAGEKPQRGDVIVFKAPQQALIRTGLGATRAAFAENLALSSKDNMSGVDYIKRIVGKGG 203
Query: 237 D------------VVEVREGK---------------------------LIVNGVVRNEDY 257
D VV +EGK L G V +
Sbjct: 204 DRVIFDVEQKTLKVVYGKEGKPCEIDCETKAFEYTQNPTNPAFPNELELTEKGDVTHNVL 263
Query: 258 ILEAPSYN-----------MTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVF 306
I E Y+ VPE FVMGD+R++S DS WG +P KNI+G++ +
Sbjct: 264 ISEYRRYSDLEFFPQEGMQTAEWLVPEGQYFVMGDHRDHSDDSRFWGFVPEKNIVGKATY 323
Query: 307 RYWPPQRIGSTVPEG 321
+ ++ + P G
Sbjct: 324 IWMSLEKEANEWPTG 338
>sp|P41027|LEP_BACCL Signal peptidase I OS=Bacillus caldolyticus GN=lepB PE=3 SV=1
Length = 182
Score = 65.1 bits (157), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 78/174 (44%), Gaps = 23/174 (13%)
Query: 156 LAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPV 215
A+ + R FV + SM PT + G+ ++ K++Y DI++F +
Sbjct: 15 FVAVCVVATLRLFVFSNYVVEGKSMMPTLESGNLLIVNKLSYDIGPIRRFDIIVFHA--- 71
Query: 216 LQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPS----------YN 265
+ ++KRV+ GD + + L VNG +E Y+ +
Sbjct: 72 ------NKKEDYVKRVIGLPGDRIAYKNDILYVNGKKVDEPYLRPYKQKLLDGRLTGDFT 125
Query: 266 MTPIT----VPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIG 315
+ +T VP +FV+GDNR +S+DS +G + I+G+ FRYWP ++
Sbjct: 126 LEEVTGKTRVPPGCIFVLGDNRLSSWDSRHFGFVKINQIVGKVDFRYWPFKQFA 179
>sp|Q6GIC4|LEPH_STAAR Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MRSA252) GN=spsA PE=3 SV=1
Length = 174
Score = 61.6 bits (148), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
++FV IP+ M PT + GDR++ K+ F + + DI+ ++ ++
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71
Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
++ R++AK G + R+G+L V+ I + N + +P N+
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKKLDGDIIPPNNFV 131
Query: 278 VMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
V+ D+ NN +DS +G + K+IIG RY+P
Sbjct: 132 VLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|P0A065|LEPH_STAAW Inactive signal peptidase IA OS=Staphylococcus aureus (strain MW2)
GN=spsA PE=3 SV=1
Length = 174
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
++FV IP+ M PT + GDR++ K+ F + + DI+ ++ ++
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71
Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
++ R++AK G + R+G+L V+ I + N + +P N+
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131
Query: 278 VMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
V+ D+ NN +DS +G + K+IIG RY+P
Sbjct: 132 VLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|P0A066|LEPH_STAAU Inactive signal peptidase IA OS=Staphylococcus aureus GN=spsA PE=3
SV=1
Length = 174
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
++FV IP+ M PT + GDR++ K+ F + + DI+ ++ ++
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71
Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
++ R++AK G + R+G+L V+ I + N + +P N+
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131
Query: 278 VMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
V+ D+ NN +DS +G + K+IIG RY+P
Sbjct: 132 VLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|Q6GAW2|LEPH_STAAS Inactive signal peptidase IA OS=Staphylococcus aureus (strain
MSSA476) GN=spsA PE=3 SV=1
Length = 174
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
++FV IP+ M PT + GDR++ K+ F + + DI+ ++ ++
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71
Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
++ R++AK G + R+G+L V+ I + N + +P N+
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131
Query: 278 VMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
V+ D+ NN +DS +G + K+IIG RY+P
Sbjct: 132 VLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|P0A064|LEPH_STAAN Inactive signal peptidase IA OS=Staphylococcus aureus (strain N315)
GN=spsA PE=3 SV=1
Length = 174
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
++FV IP+ M PT + GDR++ K+ F + + DI+ ++ ++
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71
Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
++ R++AK G + R+G+L V+ I + N + +P N+
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131
Query: 278 VMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
V+ D+ NN +DS +G + K+IIG RY+P
Sbjct: 132 VLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|P0A063|LEPH_STAAM Inactive signal peptidase IA OS=Staphylococcus aureus (strain Mu50
/ ATCC 700699) GN=spsA PE=3 SV=1
Length = 174
Score = 61.2 bits (147), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 73/153 (47%), Gaps = 18/153 (11%)
Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
++FV IP+ M PT + GDR++ K+ F + + DI+ ++ ++
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71
Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
++ R++AK G + R+G+L V+ I + N + +P N+
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131
Query: 278 VMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
V+ D+ NN +DS +G + K+IIG RY+P
Sbjct: 132 VLNDHDNNQHDSRQFGLIDKKDIIGNISLRYYP 164
>sp|Q5HHC0|LEPH_STAAC Inactive signal peptidase IA OS=Staphylococcus aureus (strain COL)
GN=spsA PE=3 SV=1
Length = 174
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 72/153 (47%), Gaps = 18/153 (11%)
Query: 166 RSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDD 225
++FV IP+ M PT + GDR++ K+ F + + DI+ ++ ++
Sbjct: 22 QTFVIVGHVIPNNDMSPTLNKGDRVIVNKIKVTFNQLNNGDIITYRRG----------NE 71
Query: 226 VFIKRVVAKEGDVVEVREGKLI-----VNGVVRNEDYILEAPSYNMTPI---TVPENSVF 277
++ R++AK G + R+G+L V+ I + N + +P N+
Sbjct: 72 IYTSRIIAKPGQSMAFRQGQLYRDDRPVDASYAKNRKIKDFSLRNFKELDGDIIPPNNFV 131
Query: 278 VMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWP 310
V+ D NN +DS +G + K+IIG RY+P
Sbjct: 132 VLNDQDNNKHDSRQFGLIDKKDIIGNVSLRYYP 164
>sp|P00803|LEP_ECOLI Signal peptidase I OS=Escherichia coli (strain K12) GN=lepB PE=1
SV=2
Length = 324
Score = 55.8 bits (133), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 142 PGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRK 201
PGWL + +V L I L RSF+ EP IPS SM PT +GD I+ EK Y +
Sbjct: 58 PGWL----ETGASVFPVLAIVLIVRSFIYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKD 113
Query: 202 PC------------SNDIVIFKSP--PVLQEVGYTDDDVFIKRVVAKEGDVV 239
P DIV+FK P P L +IKR V GD V
Sbjct: 114 PIYQKTLIETGHPKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKV 156
Score = 46.6 bits (109), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 27/45 (60%)
Query: 260 EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRS 304
+ P + VP F+MGDNR+NS DS WG +P N++GR+
Sbjct: 253 QQPGQQLATWIVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGRA 297
>sp|P0A1W2|LEP_SALTY Signal peptidase I OS=Salmonella typhimurium (strain LT2 / SGSC1412
/ ATCC 700720) GN=lepB PE=3 SV=1
Length = 324
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 142 PGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRK 201
PGWL + +V L I L RSF+ EP IPS SM PT +GD I+ EK Y +
Sbjct: 58 PGWL----ETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKD 113
Query: 202 PC------------SNDIVIFKSP--PVLQEVGYTDDDVFIKRVVAKEGDVV 239
P DIV+FK P P L +IKR V GD +
Sbjct: 114 PIYQKTLIETGHPKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKI 156
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 260 EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSV 305
+ P + VP F+MGDNR+NS DS WG +P N++G++V
Sbjct: 253 QQPGQPLATWVVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGKAV 298
>sp|P0A1W3|LEP_SALTI Signal peptidase I OS=Salmonella typhi GN=lepB PE=3 SV=1
Length = 324
Score = 54.7 bits (130), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 50/112 (44%), Gaps = 27/112 (24%)
Query: 142 PGWLNITSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRK 201
PGWL + +V L I L RSF+ EP IPS SM PT +GD I+ EK Y +
Sbjct: 58 PGWL----ETGASVFPVLAIVLIVRSFLYEPFQIPSGSMMPTLLIGDFILVEKFAYGIKD 113
Query: 202 PC------------SNDIVIFKSP--PVLQEVGYTDDDVFIKRVVAKEGDVV 239
P DIV+FK P P L +IKR V GD +
Sbjct: 114 PIYQKTLIETGHPKRGDIVVFKYPEDPKLD---------YIKRAVGLPGDKI 156
Score = 45.4 bits (106), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 28/46 (60%)
Query: 260 EAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSV 305
+ P + VP F+MGDNR+NS DS WG +P N++G++V
Sbjct: 253 QQPGQPLATWVVPPGQYFMMGDNRDNSADSRYWGFVPEANLVGKAV 298
>sp|Q28I39|IMP1L_XENTR Mitochondrial inner membrane protease subunit 1 OS=Xenopus
tropicalis GN=immp1l PE=2 SV=1
Length = 167
Score = 54.7 bits (130), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSP 213
T+ + AF ++ E SM PT D ++ + ++ +F DI++ KSP
Sbjct: 16 TIQYGCIAHCAF-EYIGEVVICSGPSMEPTIRNYDVLLCDNLSRHFFSIHKGDIIVAKSP 74
Query: 214 --PVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILEAPSYNMTPITV 271
P + KRV+ EGD V + + +L+ +Y V
Sbjct: 75 DKPSVN---------ICKRVIGLEGDKV-----------CMSSPSALLKRHTY------V 108
Query: 272 PENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIG 315
P+ V++ GDN +NS DS +GP+P I GR R WP + G
Sbjct: 109 PKGHVWLEGDNLDNSTDSRSYGPVPYALIRGRICLRVWPLESFG 152
>sp|Q96LU5|IMP1L_HUMAN Mitochondrial inner membrane protease subunit 1 OS=Homo sapiens
GN=IMMP1L PE=2 SV=1
Length = 166
Score = 54.3 bits (129), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 58/137 (42%), Gaps = 24/137 (17%)
Query: 179 SMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDV 238
SM PT D + AE ++ +F DIVI KSP KRV+ EGD
Sbjct: 40 SMEPTIQNSDIVFAENLSRHFYGIQRGDIVIAKSPS-------DPKSNICKRVIGLEGDK 92
Query: 239 VEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAK 298
+ + + ++ SY VP V++ GDN NS DS +GP+P
Sbjct: 93 I-----------LTTSPSDFFKSHSY------VPMGHVWLEGDNLQNSTDSRCYGPIPYG 135
Query: 299 NIIGRSVFRYWPPQRIG 315
I GR F+ WP G
Sbjct: 136 LIRGRIFFKIWPLSDFG 152
>sp|Q9CQU8|IMP1L_MOUSE Mitochondrial inner membrane protease subunit 1 OS=Mus musculus
GN=Immp1l PE=2 SV=1
Length = 166
Score = 53.5 bits (127), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 59/137 (43%), Gaps = 24/137 (17%)
Query: 179 SMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDV 238
SM PT D + AE ++ +F DIVI KSP KRV+ EGD
Sbjct: 40 SMEPTIQNSDIVFAENLSRHFYGIQRGDIVIAKSPS-------DPKSNICKRVIGLEGDK 92
Query: 239 VEVREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHVWGPLPAK 298
+ + + + ++ SY VP V++ GDN NS DS +GP+P
Sbjct: 93 I-----------LSTSPSDVFKSRSY------VPTGHVWLEGDNLQNSTDSRYYGPIPYG 135
Query: 299 NIIGRSVFRYWPPQRIG 315
I GR F+ WP G
Sbjct: 136 LIRGRIFFKIWPFSDFG 152
>sp|P57347|LEP_BUCAI Signal peptidase I OS=Buchnera aphidicola subsp. Acyrthosiphon
pisum (strain APS) GN=lepB PE=3 SV=1
Length = 314
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 50/90 (55%), Gaps = 9/90 (10%)
Query: 156 LAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPV 215
LA +I RSF+ EP IPS SM PT VGD I+ EK +Y ++P ++ I+I P
Sbjct: 69 LAIFII----RSFIYEPFQIPSGSMMPTLLVGDFILVEKFSYGIKEPITHKILIRTKKPN 124
Query: 216 LQEVGY----TDDDV-FIKRVVAKEGDVVE 240
++ TD ++ +IKR++ GD +
Sbjct: 125 RGDIAVFQHPTDHNINYIKRIIGLPGDKIR 154
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/134 (23%), Positives = 66/134 (49%), Gaps = 12/134 (8%)
Query: 184 FDVGDRIVAEKVTYYFRKPCSNDIVI----FKSPPVLQEVGYT-------DDDVFIKRVV 232
+D+ D+ + Y ++ C I I +S +Q++ ++ D +++
Sbjct: 155 YDLHDKHIHICTNYSDQRGCEKKISINYSQSRSSNFIQKIYFSNKNNIKEDKNIYNSLYF 214
Query: 233 AKEGDVVE-VREGKLIVNGVVRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYDSHV 291
+++E V+ L++N + ++ + + VP+ F+MGDNR+NS DS
Sbjct: 215 DIVEEIIEDVKHSILLLNSIKNTKENYFQQKNMPKLTWIVPKGEYFMMGDNRDNSLDSRY 274
Query: 292 WGPLPAKNIIGRSV 305
WG +P KN++G+++
Sbjct: 275 WGFVPEKNLVGKAI 288
>sp|Q8K9R0|LEP_BUCAP Signal peptidase I OS=Buchnera aphidicola subsp. Schizaphis
graminum (strain Sg) GN=lepB PE=3 SV=1
Length = 312
Score = 51.6 bits (122), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 184 FDVGDRIVAEKVTYYFRKPCSNDIVIFKSPPVLQ--------------EVGYTDDDVFIK 229
+D+ + + + Y +K C N + I S P L E + ++ K
Sbjct: 154 YDINRKKIKICINYTNQKNCENKLFITYSKPKLSNFFQKIYLLKSRTNEEEKVYNSIYFK 213
Query: 230 RVVAKEGDVVEVREGKLIVNGV-VRNEDYILEAPSYNMTPITVPENSVFVMGDNRNNSYD 288
+V E + ++ LI++G+ + DY + + I VP+N F+MGDNR+NS D
Sbjct: 214 KV---EEKINNLKHNILILDGINSKINDYYQQKGMPKLIWI-VPKNKYFMMGDNRDNSLD 269
Query: 289 SHVWGPLPAKNIIGRS 304
S WG +P +N++G++
Sbjct: 270 SRYWGFVPEENLLGKA 285
Score = 51.2 bits (121), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 20/99 (20%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSN-------- 205
++ I RSF+ EP IPS SM PT +GD I+ +K +Y ++P +N
Sbjct: 63 SLFPTFFIVFIIRSFIYEPFQIPSGSMMPTLLIGDFILVKKFSYGIKEPITNKTIIKMNL 122
Query: 206 ----DIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVE 240
DIV+FK P ++ +IKRVV GD ++
Sbjct: 123 PQRGDIVVFKHPK--------NNIDYIKRVVGLPGDKIQ 153
>sp|A8GYE1|LEP_RICB8 Signal peptidase I OS=Rickettsia bellii (strain OSU 85-389) GN=lepB
PE=3 SV=1
Length = 289
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 64/222 (28%)
Query: 148 TSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY---------- 197
T+ + K+ + +VI+L R + E +P+ SM T DRI K +Y
Sbjct: 37 TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 96
Query: 198 ----------YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLI 247
+ R P DI+IF+ P + + +IKR++ GD V++ + +
Sbjct: 97 DFIHLFKGRIFARTPERGDIIIFRPPHEM-------NTRYIKRLIGLPGDKVQLIDDVIY 149
Query: 248 VNG--VVRNED--YILEAP-----------------SYNMTPIT---------------V 271
+N + R E Y+ E SY + P+ V
Sbjct: 150 INDEKIERVESGIYVSEEGRKYLKFKETLPNGKTYFSYKLAPVLGIMFNDKYGNTDAFYV 209
Query: 272 PENSVFVMGDNRNNSYDSHV-WGPLPAKNIIGRSVFRYWPPQ 312
PE F +GDNR+ S DS + G +P +N I ++ F ++ +
Sbjct: 210 PEGEYFFLGDNRDQSNDSRIDLGFVPFENFIAKAQFIWFSTK 251
>sp|P42959|LEPU_BACSU Signal peptidase I U OS=Bacillus subtilis (strain 168) GN=sipU PE=1
SV=1
Length = 187
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 78/166 (46%), Gaps = 20/166 (12%)
Query: 155 VLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTYYFRKPCSNDIVIFKSPP 214
++AAL+ ++ R +P I SM PT +RI+ +K + DI++
Sbjct: 24 MIAALIFTI--RLVFYKPFLIEGSSMAPTLKDSERILVDKAVKWTGGFHRGDIIVIHD-- 79
Query: 215 VLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNGVVRNEDYILE------APSYNMT- 267
++ G + F+KR++ GD ++++ +L +N E Y+ E +T
Sbjct: 80 --KKSGRS----FVKRLIGLPGDSIKMKNDQLYINDKKVEEPYLKEYKQEVKESGVTLTG 133
Query: 268 --PITVPENSVFVMGDNRNNSYDSHVWGPLPAK-NIIGRSVFRYWP 310
+ VP FVMGDNR NS DS +P++ +IIG ++P
Sbjct: 134 DFEVEVPSGKYFVMGDNRLNSLDSRNGMGMPSEDDIIGTESLVFYP 179
>sp|Q1RHA1|LEP_RICBR Signal peptidase I OS=Rickettsia bellii (strain RML369-C) GN=lepB
PE=3 SV=1
Length = 291
Score = 51.6 bits (122), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/222 (23%), Positives = 90/222 (40%), Gaps = 64/222 (28%)
Query: 148 TSDDAKTVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY---------- 197
T+ + K+ + +VI+L R + E +P+ SM T DRI K +Y
Sbjct: 39 TAQEWKSFILVVVIALMIRILIIESFVVPTGSMKATILENDRIFGTKYSYGYSNYSLSFF 98
Query: 198 ----------YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLI 247
+ R P DI+IF+ P + + +IKR++ GD V++ + +
Sbjct: 99 DFIHLFKGRIFARTPERGDIIIFRPPHEM-------NTRYIKRLIGLPGDKVQLIDDVIY 151
Query: 248 VNG--VVRNED--YILEAP-----------------SYNMTPIT---------------V 271
+N + R E Y+ E SY + P+ V
Sbjct: 152 INDEKIERVESGIYVSEEGRKYLKFKETLPNGKTYFSYKLAPVLGIMFNDKYGNTDAFYV 211
Query: 272 PENSVFVMGDNRNNSYDSHV-WGPLPAKNIIGRSVFRYWPPQ 312
PE F +GDNR+ S DS + G +P +N I ++ F ++ +
Sbjct: 212 PEGEYFFLGDNRDQSNDSRIDLGFVPFENFIAKAQFIWFSTK 253
>sp|Q8L2J7|LEP_RICTY Signal peptidase I OS=Rickettsia typhi (strain ATCC VR-144 /
Wilmington) GN=lepB PE=1 SV=1
Length = 264
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 84/212 (39%), Gaps = 64/212 (30%)
Query: 158 ALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY-------------------- 197
+ I+L R + EP +P+ SM T D I + K +Y
Sbjct: 22 VICIALVIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLFKGRV 81
Query: 198 YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVN-------- 249
+ R+P DIV+F+ PP V Y IKR++ GD +++ + + +N
Sbjct: 82 FAREPERGDIVVFR-PPNDMSVRY------IKRLIGLPGDKIQLIDDVIYINDKKIERTE 134
Query: 250 -GVVRNEDYILEAP------------SYNMTPI---------------TVPENSVFVMGD 281
G ED I SY + PI VPE F +GD
Sbjct: 135 VGTYIGEDGIKYLKFKETLPNGRTYFSYKLAPIFGIISNDRYSNTGVFYVPEGQYFFLGD 194
Query: 282 NRNNSYDSHV-WGPLPAKNIIGRSVFRYWPPQ 312
NR+ S DS V G +P +N IG++ F ++ +
Sbjct: 195 NRDRSNDSRVNLGFVPFENFIGKAQFIWFSTK 226
>sp|P59662|LEP_STRR6 Signal peptidase I OS=Streptococcus pneumoniae (strain ATCC BAA-255
/ R6) GN=lepB PE=3 SV=1
Length = 204
Score = 48.5 bits (114), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 29/48 (60%)
Query: 269 ITVPENSVFVMGDNRNNSYDSHVWGPLPAKNIIGRSVFRYWPPQRIGS 316
TVPE ++GD+R S DS G AK+I G + FR+WP RIG+
Sbjct: 156 FTVPEGEYLLLGDDRLVSSDSRHVGTFKAKDITGEAKFRFWPITRIGT 203
>sp|A8F0M1|LEP_RICM5 Signal peptidase I OS=Rickettsia massiliae (strain Mtu5) GN=lepB
PE=3 SV=2
Length = 266
Score = 48.1 bits (113), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 87/216 (40%), Gaps = 64/216 (29%)
Query: 154 TVLAALVISLAFRSFVAEPRYIPSLSMYPTFDVGDRIVAEKVTY---------------- 197
+ + + I+L R + EP +P+ SM T D I + K +Y
Sbjct: 20 SFVFVICIALLIRILIMEPFTVPTGSMKATILENDYIFSTKYSYGYSNYSLSFFDFIPLF 79
Query: 198 ----YFRKPCSNDIVIFKSPPVLQEVGYTDDDVFIKRVVAKEGDVVEVREGKLIVNG--V 251
+ R+P DIV+F+ PP V Y IKR++ GD +++ + + +N +
Sbjct: 80 KGRIFAREPERGDIVVFR-PPHDMSVRY------IKRLIGLPGDKIQLIDDVIYINDKKI 132
Query: 252 VRNE--DYILEAP-----------------SYNMTPI---------------TVPENSVF 277
R E YI E SY + PI VPE F
Sbjct: 133 ERTEVGTYISEEGIKYLKFKETLPNGRTYFSYKLAPIYGVIYNDRYGNTDVFYVPEGKYF 192
Query: 278 VMGDNRNNSYDSHV-WGPLPAKNIIGRSVFRYWPPQ 312
+GDNR+ S DS V G +P +N I ++ F ++ +
Sbjct: 193 FLGDNRDQSNDSRVNLGFVPFENFIAKAQFIWFSTK 228
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.136 0.410
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 139,968,654
Number of Sequences: 539616
Number of extensions: 6586329
Number of successful extensions: 55071
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 392
Number of HSP's successfully gapped in prelim test: 112
Number of HSP's that attempted gapping in prelim test: 44539
Number of HSP's gapped (non-prelim): 7010
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 61 (28.1 bits)