Query 019681
Match_columns 337
No_of_seqs 225 out of 1650
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 05:29:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019681.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019681hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 1.1E-65 3.8E-70 490.2 17.7 281 51-337 24-304 (304)
2 3iyz_A Aquaporin-4; water tran 100.0 2E-53 6.9E-58 408.9 24.1 248 62-324 21-273 (340)
3 3gd8_A Aquaporin-4; proton exc 100.0 1E-51 3.5E-56 379.0 22.9 222 86-322 2-223 (223)
4 2zz9_A Aquaporin-4; water tran 100.0 1.6E-51 5.3E-56 392.0 22.8 231 78-323 3-233 (301)
5 3d9s_A Aquaporin-5, AQP-5; aqu 100.0 6.4E-51 2.2E-55 382.5 22.2 228 78-324 2-230 (266)
6 1j4n_A Aquaporin 1; membrane p 100.0 1E-50 3.5E-55 382.2 22.8 234 80-323 3-236 (271)
7 2b6o_A Aquaporin-0, lens fiber 100.0 7.2E-50 2.5E-54 375.0 24.5 225 80-323 2-226 (263)
8 2o9g_A Aquaporin Z; integral m 100.0 2.7E-50 9.4E-55 372.0 19.2 222 87-323 4-233 (234)
9 2w2e_A AQY1, aquaporin, aquapo 100.0 1E-49 3.4E-54 376.6 21.3 224 86-323 43-267 (279)
10 3llq_A Aquaporin Z 2; aquapori 100.0 4.9E-50 1.7E-54 374.0 18.0 223 83-320 25-253 (256)
11 1ldf_A Glycerol uptake facilit 100.0 1.2E-49 4.1E-54 376.9 18.6 227 85-323 5-258 (281)
12 2f2b_A Aquaporin AQPM; protein 100.0 5.9E-49 2E-53 365.7 21.5 231 86-321 3-245 (246)
13 3c02_A Aquaglyceroporin; membr 100.0 1E-49 3.5E-54 373.1 14.4 228 85-324 7-246 (258)
14 2f2b_A Aquaporin AQPM; protein 99.5 1.6E-14 5.3E-19 133.9 9.0 100 85-198 141-245 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.4 4.3E-13 1.5E-17 125.4 9.7 112 216-331 8-119 (263)
16 2w2e_A AQY1, aquaporin, aquapo 99.2 1.5E-11 5.2E-16 115.8 8.1 104 85-202 166-269 (279)
17 3d9s_A Aquaporin-5, AQP-5; aqu 99.2 1.8E-11 6.3E-16 114.5 8.4 104 217-324 11-114 (266)
18 2o9g_A Aquaporin Z; integral m 99.2 3.4E-11 1.2E-15 110.7 8.3 100 85-199 132-232 (234)
19 3llq_A Aquaporin Z 2; aquapori 99.2 3.3E-11 1.1E-15 112.1 7.3 98 85-197 155-253 (256)
20 2zz9_A Aquaporin-4; water tran 99.2 1.7E-10 5.7E-15 109.6 12.2 113 216-330 11-125 (301)
21 3gd8_A Aquaporin-4; proton exc 99.2 7.8E-11 2.7E-15 107.5 9.2 116 217-334 3-120 (223)
22 3cn5_A Aquaporin; membrane pro 99.1 3.5E-11 1.2E-15 114.5 6.4 106 85-199 182-289 (304)
23 1j4n_A Aquaporin 1; membrane p 99.1 8.3E-11 2.9E-15 110.3 8.4 111 217-329 10-127 (271)
24 3iyz_A Aquaporin-4; water tran 99.1 1E-10 3.6E-15 112.4 8.8 100 86-199 172-271 (340)
25 1ldf_A Glycerol uptake facilit 99.1 2.7E-10 9.3E-15 107.3 8.6 103 86-200 144-258 (281)
26 3c02_A Aquaglyceroporin; membr 99.0 1.6E-10 5.5E-15 107.6 5.5 104 216-323 8-113 (258)
27 3kcu_A Probable formate transp 88.8 10 0.00034 35.2 14.4 109 130-241 68-185 (285)
28 3kly_A Putative formate transp 83.6 22 0.00075 32.8 13.7 108 130-241 67-184 (280)
29 3tds_E Formate/nitrite transpo 74.5 28 0.00094 31.9 11.1 185 128-325 62-261 (268)
30 4fc4_A Nitrite transporter NIR 59.3 1E+02 0.0035 27.9 12.6 181 130-323 58-252 (261)
31 3s2u_A UDP-N-acetylglucosamine 45.4 3.8 0.00013 38.5 -0.5 22 148-169 8-29 (365)
32 2yvc_D Neprilysin; protein-pep 26.0 18 0.00061 20.9 0.4 14 4-17 11-24 (26)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=1.1e-65 Score=490.20 Aligned_cols=281 Identities=75% Similarity=1.253 Sum_probs=217.2
Q ss_pred cccccccccCCCCCCcCCCCCCCCCCcchhhhhhhHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcch
Q 019681 51 MAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGI 130 (337)
Q Consensus 51 ~~~~~~~e~~~~~~~~~~~~p~~a~~~~~~e~~~~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~ 130 (337)
|+||++.++++..+.|||+||||+|.++.+|+++|+++|++++||+||++|+|++++++++...+.+ ++...++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~~------~~~~~g~ 97 (304)
T 3cn5_A 24 MSKEVSEEAQAHQHGKDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKETV------VCGSVGL 97 (304)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCS------TTCSCHH
T ss_pred HHHHhhccccccccCCCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEeccccC------CCCCCCc
Confidence 7888632211334679999999999999999999999999999999999999999998876543321 1356788
Q ss_pred hhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCCccc
Q 019681 131 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANE 210 (337)
Q Consensus 131 l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~~~~ 210 (337)
+.+++++|+++++++|+++++||||+|||||+++++.|+++|.+++.|++||++||++|++++|.++++.++..+++.+.
T Consensus 98 l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~~g~~~ 177 (304)
T 3cn5_A 98 LGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQCLGAICGVGLVKAFMKGPYNQFGGGANS 177 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHTTTTCCC
T ss_pred eeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccCcccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999888777777777
Q ss_pred cCCcccchhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcC
Q 019681 211 LADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYN 290 (337)
Q Consensus 211 ~~~g~s~~~~f~~E~i~TfvLv~~vl~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~ 290 (337)
+.++++..++|+.|+++||+|+++++.++|+++..+++|.+.++|+.||++|++++++++++||++|||||||||+++++
T Consensus 178 ~~~~~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GPal~~~ 257 (304)
T 3cn5_A 178 VALGYNKGTALGAEIIGTFVLVYTVFSATDPKRSARDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGAAVIFN 257 (304)
T ss_dssp CCTTCCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHHHHHHC
T ss_pred cCCCccHHHHHHHHHHHHHHHHHHHhheecCccCCCCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHHc
Confidence 77888999999999999999999999999877665555556699999999999999999999999999999999999976
Q ss_pred CCCCCCcceehhhhHHHHHHHHHHHHHHHcccchhhhccCccCCCCC
Q 019681 291 KDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSQSRV 337 (337)
Q Consensus 291 ~~~~w~~~wvywvgP~iGa~laa~~~~~~~~~~~~~~~~~~~~~~~~ 337 (337)
++..|+++|+||+||++|+++|+++|++++++++.+..++||+++++
T Consensus 258 ~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~~~~~~~~~~~~~~~~ 304 (304)
T 3cn5_A 258 SNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRAAAIKALGEFRSNPTN 304 (304)
T ss_dssp CHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCCCC-------------
T ss_pred cCCCcCceEEEeehHHHHHHHHHHHHHHHhCCCCCCcccccccCCCC
Confidence 66789999999999999999999999999999998989899998864
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=100.00 E-value=2e-53 Score=408.87 Aligned_cols=248 Identities=36% Similarity=0.646 Sum_probs=212.1
Q ss_pred CCCCcCCCCCCCCCCc---c--hhhhhhhHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHH
Q 019681 62 SYSAKDYTDPPPEPLF---D--AVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWA 136 (337)
Q Consensus 62 ~~~~~~~~~p~~a~~~---~--~~e~~~~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a 136 (337)
....+||.||++.|-- . .+|...++++|++++||+||++|+|++++++++.... +.....+++.++++
T Consensus 21 ~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~-------~~~~~~g~l~Iala 93 (340)
T 3iyz_A 21 QMGRDLYDDDDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-------ENPLPVDMVLISLC 93 (340)
T ss_pred hcCCCCCCCCCCCCcchhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-------CCCCCcchHHHHHH
Confidence 3456899999998832 2 3445556899999999999999999999988754211 11234578899999
Q ss_pred HHHHHHHHhhhhcCcCCcccchhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCCccccCCccc
Q 019681 137 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYS 216 (337)
Q Consensus 137 ~G~~v~~li~~~~~iSGaHiNPAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~~~~~~~g~s 216 (337)
+|+++++.+|++++|||||+|||||+++++.|+++|.+++.|++||++||++|++++|.++++.... ..+.+.+.++.+
T Consensus 94 ~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ~lGA~~GA~lv~~~~~~~~~~-~lg~~~~~~~~s 172 (340)
T 3iyz_A 94 FGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLT 172 (340)
T ss_pred HHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhcchhhcC-ceeeccCCCccC
Confidence 9999999999999999999999999999999999999999999999999999999999998865422 223445567788
Q ss_pred chhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCC
Q 019681 217 TGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWD 296 (337)
Q Consensus 217 ~~~~f~~E~i~TfvLv~~vl~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~ 296 (337)
..++|+.|+++||+|+++++.++|+++... ..+.|+.||+++.+.++.++++||++|||||||||+++.+ .|+
T Consensus 173 ~~~~f~~E~i~Tf~Lv~~Ila~~d~~~~~~----~~~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPal~~~---~w~ 245 (340)
T 3iyz_A 173 AGHGLLVELIITFQLVFTIFASCDDKRTDV----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWE 245 (340)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhcCccCCc----ccchhhHHHHHHHHHHHhccCCccccccHHHHHHHHHHcc---CCC
Confidence 999999999999999999999998876532 3468999999999888988899999999999999999965 699
Q ss_pred cceehhhhHHHHHHHHHHHHHHHcccch
Q 019681 297 DQWLFWVGPFIGAAIAAFYHQFILRAGA 324 (337)
Q Consensus 297 ~~wvywvgP~iGa~laa~~~~~~~~~~~ 324 (337)
++||||+||++|+++|+++|++++.|++
T Consensus 246 ~~WVywvgPiiGailaallY~~l~~p~~ 273 (340)
T 3iyz_A 246 NHWIYWVGPIIGAVLAGALYEYVFCPDV 273 (340)
T ss_pred cEeehhHHHHHHHHHHHHHHHHHhCCCh
Confidence 9999999999999999999999997754
No 3
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=100.00 E-value=1e-51 Score=379.02 Aligned_cols=222 Identities=39% Similarity=0.709 Sum_probs=194.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHHH
Q 019681 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (337)
Q Consensus 86 sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~~ 165 (337)
+++|++++||+||++|++++++++.+.... ++....+++.+++++|+++++.+|+++++||||+|||||++++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~-------~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~ 74 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGT-------EKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMV 74 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTT-------TSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccC-------CCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHH
Confidence 468999999999999999999988754211 1123567889999999999999999999999999999999999
Q ss_pred HhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCCccccCCcccchhhHHHHHHHHHHHHHHHHHhccCCCCC
Q 019681 166 LARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSA 245 (337)
Q Consensus 166 l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~~~~~~~g~s~~~~f~~E~i~TfvLv~~vl~~~~~k~~~ 245 (337)
+.|+++|.+++.|+++|++|+++|+.++|.+++++... ..+.+...++.+..++++.|+++||+|+++++..+|+|++.
T Consensus 75 ~~g~~~~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~-~lg~~~~~~~~s~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~ 153 (223)
T 3gd8_A 75 CTRKISIAKSVFYIAAQCLGAIIGAGILYLVTPPSVVG-GLGVTMVHGNLTAGHGLLVELIITFQLVFTIFASCDSKRTD 153 (223)
T ss_dssp HTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHTCTTCSC
T ss_pred HcCCCCHHHHHHHHHHHHHHHHHHHHHHHhhccccccc-ceeeccCCCccCHHHHHHHHHHHHHHHHHHHHHHhccccCC
Confidence 99999999999999999999999999999999876432 22344556678889999999999999999999999887653
Q ss_pred CCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCCcceehhhhHHHHHHHHHHHHHHHccc
Q 019681 246 RDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRA 322 (337)
Q Consensus 246 ~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~~~wvywvgP~iGa~laa~~~~~~~~~ 322 (337)
. ..+.|+.||+++.+.+...++.||++|||||||||+++.+ +|+++||||+||++|+++|+++|+++++|
T Consensus 154 ~----~~~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~l~~~---~w~~~Wvy~vgP~~Ga~la~~~y~~~~~p 223 (223)
T 3gd8_A 154 V----TGSIALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGGLYEYVFCP 223 (223)
T ss_dssp C----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHT---CCTTTTHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred c----cCCccHHHHHHHHHHHHhccCCccccccHHHHHHHHHHhc---CCCcEEeehhHHHHHHHHHHHHHHHHcCC
Confidence 2 3468999999998888888899999999999999999975 69999999999999999999999999875
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=100.00 E-value=1.6e-51 Score=391.97 Aligned_cols=231 Identities=38% Similarity=0.675 Sum_probs=198.2
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccc
Q 019681 78 DAVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHIN 157 (337)
Q Consensus 78 ~~~e~~~~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiN 157 (337)
+.+|..+++++|++++||+||++|+|++++++++..... .....+++.+++++|+++++.+|+++++||||+|
T Consensus 3 ~~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~-------~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlN 75 (301)
T 2zz9_A 3 AFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGSE-------NPLPVDMVLISLCFGLSIATMVQCFGHISGGHIN 75 (301)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC--------CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCS
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccCC-------CCCCcchHHHHHHHHHHHHHhhheeccCCcceeC
Confidence 345667789999999999999999999999877543211 1234578899999999999999999999999999
Q ss_pred hhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCCccccCCcccchhhHHHHHHHHHHHHHHHHH
Q 019681 158 PAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS 237 (337)
Q Consensus 158 PAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~~~~~~~g~s~~~~f~~E~i~TfvLv~~vl~ 237 (337)
||||+++++.|+++|.+++.|++||++||++|++++|.++++.... ..+.+.+.++.+..++|+.|+++||+|+++++.
T Consensus 76 PAVTla~~~~g~~~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~-~~g~~~~~~~~s~~~~f~~E~i~Tf~Lv~~Il~ 154 (301)
T 2zz9_A 76 PAVTVAMVCTRKISIAKSVFYITAQCLGAIIGAGILYLVTPPSVVG-GLGVTTVHGNLTAGHGLLVELIITFQLVFTIFA 154 (301)
T ss_dssp HHHHHHHHHTSSSCTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGG-TSSCCCCCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhccccccC-ceeeecCCcccchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999875432 233455667788999999999999999999999
Q ss_pred hccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCCcceehhhhHHHHHHHHHHHHH
Q 019681 238 ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQ 317 (337)
Q Consensus 238 ~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~~~wvywvgP~iGa~laa~~~~ 317 (337)
++|+++... ..+.|+.||+++.+.++.++++||++|||||||||+++.+ .|+++|+||+||++|+++|+++|+
T Consensus 155 ~~d~~~~~~----~~~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPal~~~---~w~~~WVy~vgPiiGailaa~ly~ 227 (301)
T 2zz9_A 155 SCDDKRTDV----TGSVALAIGFSVAIGHLFAINYTGASMNPARSFGPAVIMG---NWENHWIYWVGPIIGAVLAGALYE 227 (301)
T ss_dssp HSCSSSSCC----SSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHC---CCTTTTHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCCCCc----cchHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHHHHhC---CCcceeeeeeHHHHHHHHHHHHHH
Confidence 888776432 3478999999999999999999999999999999999965 699999999999999999999999
Q ss_pred HHcccc
Q 019681 318 FILRAG 323 (337)
Q Consensus 318 ~~~~~~ 323 (337)
+++.++
T Consensus 228 ~l~~~~ 233 (301)
T 2zz9_A 228 YVFCPD 233 (301)
T ss_dssp TTTC--
T ss_pred HHhCCc
Confidence 998754
No 5
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=100.00 E-value=6.4e-51 Score=382.50 Aligned_cols=228 Identities=36% Similarity=0.618 Sum_probs=201.0
Q ss_pred chhhhhhhHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccc
Q 019681 78 DAVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHIN 157 (337)
Q Consensus 78 ~~~e~~~~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiN 157 (337)
+.+|+++++++|++++||+||++|+|+++++++... ....+++.+++++|+++++.+|+++++||||+|
T Consensus 2 ~~~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~-----------~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlN 70 (266)
T 3d9s_A 2 SKKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP-----------SALPTILQIALAFGLAIGTLAQALGPVSGGHIN 70 (266)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCS-----------SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ChhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------CCCccHHHHHHHHHHHHHHHHHHHcccCcceEC
Confidence 457888999999999999999999999998875311 122467889999999999999999999999999
Q ss_pred hhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCCccccCCcccchhhHHHHHHHHHHHHHHHHH
Q 019681 158 PAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFS 237 (337)
Q Consensus 158 PAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~~~~~~~g~s~~~~f~~E~i~TfvLv~~vl~ 237 (337)
||||+++++.|+++|.+++.|++||++||++|+++++.++++.... ..+.+.+.++.+..++|+.|+++||+|+++++.
T Consensus 71 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~-~~g~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~ 149 (266)
T 3d9s_A 71 PAITLALLVGNQISLLRAFFYVAAQLVGAIAGAGILYGVAPLNARG-NLAVNALNNNTTQGQAMVVELILTFQLALCIFA 149 (266)
T ss_dssp HHHHHHHHHTSSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHT-TTTCCCCCTTSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccC-ceeeccCCccccHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999875432 233444556778899999999999999999999
Q ss_pred hccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCCc-ceehhhhHHHHHHHHHHHH
Q 019681 238 ATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDD-QWLFWVGPFIGAAIAAFYH 316 (337)
Q Consensus 238 ~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~~-~wvywvgP~iGa~laa~~~ 316 (337)
++|+++... ..+.|+.||+++.+.++.++++||++|||||||||+++.+ .|++ +||||+||++|+++|+++|
T Consensus 150 ~~d~~~~~~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~~Wvy~vgP~~Ga~la~~~y 222 (266)
T 3d9s_A 150 STDSRRTSP----VGSPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPAVVMN---RFSPAHWVFWVGPIVGAVLAAILY 222 (266)
T ss_dssp HHCTTCCSC----CCCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHT---CCCTTHHHHHHHHHHHHHHHHHHH
T ss_pred HhcccCCCc----cchHHHHHHHHHHHHHHHhhccccccccHHHHHHHHHHcC---CcccCEeeeehHHHHHHHHHHHHH
Confidence 988766432 3479999999999999999999999999999999999975 7998 9999999999999999999
Q ss_pred HHHcccch
Q 019681 317 QFILRAGA 324 (337)
Q Consensus 317 ~~~~~~~~ 324 (337)
++++.|+.
T Consensus 223 ~~l~~~~~ 230 (266)
T 3d9s_A 223 FYLLFPNS 230 (266)
T ss_dssp HHTTSCCS
T ss_pred HHHhCCCc
Confidence 99987653
No 6
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=100.00 E-value=1e-50 Score=382.19 Aligned_cols=234 Identities=42% Similarity=0.726 Sum_probs=199.3
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchh
Q 019681 80 VELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPA 159 (337)
Q Consensus 80 ~e~~~~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPA 159 (337)
+|+++++++|++++||+||++|+|++++++.+....... ..+.....+.+.+++++|+++++.+|+++++||||+|||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~--~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPA 80 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIKS--NQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPA 80 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSS--CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccc--ccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHH
Confidence 577889999999999999999999999887754321100 011122346788999999999999999999999999999
Q ss_pred hhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCCccccCCcccchhhHHHHHHHHHHHHHHHHHhc
Q 019681 160 VTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSAT 239 (337)
Q Consensus 160 VTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~~~~~~~g~s~~~~f~~E~i~TfvLv~~vl~~~ 239 (337)
||+++++.|+++|.+++.|++||++||++|++++|.++++... ...+.+...++.+..++++.|+++||+|+++++.++
T Consensus 81 VTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~E~i~T~~Lv~~i~~~~ 159 (271)
T 1j4n_A 81 VTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGITSSLPD-NSLGLNALAPGVNSGQGLGIEIIGTLQLVLCVLATT 159 (271)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTT-CCTTCCCCCTTCCTTGGGHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcc-cccccccCCCccchHHHHHHHHHHHHHHHHHHHhhc
Confidence 9999999999999999999999999999999999999865322 122344556678889999999999999999999998
Q ss_pred cCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCCcceehhhhHHHHHHHHHHHHHHH
Q 019681 240 DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 319 (337)
Q Consensus 240 ~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~~~wvywvgP~iGa~laa~~~~~~ 319 (337)
|+++... ..+.|+.||++|.+.++.++++||++|||||||||+++.+ .|+++|+||+||++|+++|+++|+++
T Consensus 160 d~~~~~~----~~~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~~~---~~~~~wv~~vgP~~Ga~la~~~y~~~ 232 (271)
T 1j4n_A 160 DRRRRDL----GGSGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVITH---NFQDHWIFWVGPFIGAALAVLIYDFI 232 (271)
T ss_dssp CSSCCCC----CSCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHTT---CCTTTTHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCCc----cccHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHHhC---CCcceeHHHHHHHHHHHHHHHHHHHH
Confidence 8765432 3579999999999888888899999999999999999954 79999999999999999999999999
Q ss_pred cccc
Q 019681 320 LRAG 323 (337)
Q Consensus 320 ~~~~ 323 (337)
+.++
T Consensus 233 ~~~~ 236 (271)
T 1j4n_A 233 LAPR 236 (271)
T ss_dssp TSCC
T ss_pred hCCC
Confidence 8754
No 7
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=100.00 E-value=7.2e-50 Score=374.97 Aligned_cols=225 Identities=35% Similarity=0.610 Sum_probs=197.0
Q ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchh
Q 019681 80 VELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPA 159 (337)
Q Consensus 80 ~e~~~~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPA 159 (337)
+|+++++++|++++||+||++|+++++++++..+ ....+++.+++++|+++++.+++++++||+|+|||
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~~-----------~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPA 70 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRWA-----------PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPA 70 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC-----------SSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----------CCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChH
Confidence 4777889999999999999999999998775321 12346788999999999999999999999999999
Q ss_pred hhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCCccccCCcccchhhHHHHHHHHHHHHHHHHHhc
Q 019681 160 VTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSAT 239 (337)
Q Consensus 160 VTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~~~~~~~g~s~~~~f~~E~i~TfvLv~~vl~~~ 239 (337)
||+++++.|+++|.++++|++||++||++|+.+++.++++.+.. ..+.+.+.++.+..++|+.|+++||+|+++++.++
T Consensus 71 VTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~-~~~~~~~~~~~s~~~~~~~E~i~Tf~Lv~~il~~~ 149 (263)
T 2b6o_A 71 VTFAFLVGSQMSLLRAICYVVAQLLGAVAGAAVLYSVTPPAVRG-NLALNTLHPGVSVGQATIVEIFLTLQFVLCIFATY 149 (263)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHHHHSCTTTCS-SCSCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccccc-ccccccCCccccHHHHHHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999875432 22345556778899999999999999999999998
Q ss_pred cCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCCcceehhhhHHHHHHHHHHHHHHH
Q 019681 240 DPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFI 319 (337)
Q Consensus 240 ~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~~~wvywvgP~iGa~laa~~~~~~ 319 (337)
|++++.. ..+.|+.||+++.+++++++++||++|||||||||+++.+ .|+++||||+||++|+++|+++|+++
T Consensus 150 d~~~~~~----~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~---~~~~~Wvy~vgP~~Ga~la~~~y~~l 222 (263)
T 2b6o_A 150 DERRNGR----LGSVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPAILTR---NFTNHWVYWVGPVIGAGLGSLLYDFL 222 (263)
T ss_dssp CTTSCSS----CCCHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHHHHHT---CCTTCTHHHHHHHHHHHHHHHHHHTT
T ss_pred cccCCCC----cccHHHHHHHHHHHHHHhccCCCcccccHHHHHHHHHHcC---CccceeHHHHHHHHHHHHHHHHHHHH
Confidence 8765432 3578999999999999999999999999999999999965 79999999999999999999999999
Q ss_pred cccc
Q 019681 320 LRAG 323 (337)
Q Consensus 320 ~~~~ 323 (337)
+.++
T Consensus 223 ~~~~ 226 (263)
T 2b6o_A 223 LFPR 226 (263)
T ss_dssp TSCC
T ss_pred hCCc
Confidence 8764
No 8
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=100.00 E-value=2.7e-50 Score=372.03 Aligned_cols=222 Identities=30% Similarity=0.537 Sum_probs=189.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHHHH
Q 019681 87 FYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFL 166 (337)
Q Consensus 87 l~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~~l 166 (337)
++|++++||+||++|++++++++...+... ..+.+++.+++++|+++++.+|+++++||||+|||||+++++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~~--------~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~ 75 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGFP--------ELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWA 75 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTCT--------TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCCC--------CCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHH
Confidence 579999999999999999988764322111 234578999999999999999999999999999999999999
Q ss_pred hcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhh--hhhc--C---CC-ccccCCcccchhhHHHHHHHHHHHHHHHHHh
Q 019681 167 ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSY--YTRY--G---GG-ANELADGYSTGVGLAAEIIGTFVLVYTVFSA 238 (337)
Q Consensus 167 ~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~--~~~~--~---~~-~~~~~~g~s~~~~f~~E~i~TfvLv~~vl~~ 238 (337)
.|+++|.+++.|++||++||++|+.++|.++++. ++.. + .+ ..+.+.+++..++|+.|+++||+|+++++.+
T Consensus 76 ~g~~~~~~~~~Yi~aQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~E~i~T~~Lv~~i~~~ 155 (234)
T 2o9g_A 76 GGRFPAKEVVGYVIAQVVGGIVAAALLYLIASGKTGFDAAASGFASNGYGEHSPGGYSMLSALVVELVLSAGFLLVIHGA 155 (234)
T ss_dssp TTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSTTCCHHHHCTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccccceeeecCCCccchHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999998743 2211 0 11 1123346788999999999999999999999
Q ss_pred ccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCCcceehhhhHHHHHHHHHHHHHH
Q 019681 239 TDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQF 318 (337)
Q Consensus 239 ~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~~~wvywvgP~iGa~laa~~~~~ 318 (337)
+|+++. ..+.|+.||+++.+++++++++||++|||||||||+++++ +..|+++||||+||++|+++|+++|++
T Consensus 156 ~d~~~~------~~~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPal~~g-~~~~~~~Wv~~vgP~~Ga~la~~~y~~ 228 (234)
T 2o9g_A 156 TDKFAP------AGFAPIAIGLACTLIHLISIPVTNTSVNPARSTAVAIFQG-GWALEQLWFFWVVPIVGGIIGGLIYRT 228 (234)
T ss_dssp TSTTSC------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-SHHHHSHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCc------cchHHHHHHHHHHHHHHHccCCCccccChHHHHHHHHHhC-CCCCceeeeeehHHhHHHHHHHHHHHH
Confidence 885432 3479999999999999999999999999999999999975 445779999999999999999999999
Q ss_pred Hcccc
Q 019681 319 ILRAG 323 (337)
Q Consensus 319 ~~~~~ 323 (337)
+++++
T Consensus 229 ~~~~~ 233 (234)
T 2o9g_A 229 LLEKR 233 (234)
T ss_dssp HTSCC
T ss_pred HcCCC
Confidence 98764
No 9
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=100.00 E-value=1e-49 Score=376.56 Aligned_cols=224 Identities=32% Similarity=0.515 Sum_probs=189.9
Q ss_pred HHHHHHHHHHHHHHHHHHHhhheee-cccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHH
Q 019681 86 SFYRALIAEFIATLLFLYVTVLTVI-GYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (337)
Q Consensus 86 sl~r~~iaEfigT~llv~i~~~~vi-~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~ 164 (337)
+.+|++++||+||++|+|++++++. ....... ..+.....+++.+++++|+++++.+|+++++||||+|||||+++
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~~~---~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~ 119 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAPET---PDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLAL 119 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCC---GGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc---cccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHH
Confidence 5689999999999999999887532 1111000 00112345688899999999999999999999999999999999
Q ss_pred HHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCCccccCCcccchhhHHHHHHHHHHHHHHHHHhccCCCC
Q 019681 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGGANELADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRS 244 (337)
Q Consensus 165 ~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~~~~~~~g~s~~~~f~~E~i~TfvLv~~vl~~~~~k~~ 244 (337)
++.|+++|.+++.|++||++||++|++++|.++++... ..+.+.++.+..++|+.|+++||+|+++++...+++++
T Consensus 120 ~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~----~~t~~~~~~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~~ 195 (279)
T 2w2e_A 120 VLARAIPPFRGILMAFTQIVAGMAAAGAASAMTPGEIA----FANALGGGASRTRGLFLEAFGTAILCLTVLMLAVEKHR 195 (279)
T ss_dssp HHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHSCSSCC----CSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHTTSCST
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHccccce----eeccCCccccHHHHHHHHHHHHHHHHHHHHHHccCCCC
Confidence 99999999999999999999999999999999876542 23444557788999999999999999999988776543
Q ss_pred CCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCCcceehhhhHHHHHHHHHHHHHHHcccc
Q 019681 245 ARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAG 323 (337)
Q Consensus 245 ~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~~~wvywvgP~iGa~laa~~~~~~~~~~ 323 (337)
. ..++|+.||++|++++++++++||++|||||||||+++.+ ..|+++||||+||++|+++|+++|++++..+
T Consensus 196 ~-----~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GPal~~~--~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~ 267 (279)
T 2w2e_A 196 A-----TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGPAVAAR--SFPNYHWIYWLGPILGAFLAYSIWQMWKWLN 267 (279)
T ss_dssp T-----GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHHHT--CCCTTTTHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred C-----cCcHHHHHHHHHHHHHHhcccccccccChHHHHHHHHHhc--cchhhhhHHHHHHHHHHHHHHHHHHHHHccC
Confidence 2 3589999999999999999999999999999999999975 3567899999999999999999999997654
No 10
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=100.00 E-value=4.9e-50 Score=374.00 Aligned_cols=223 Identities=32% Similarity=0.533 Sum_probs=187.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhH
Q 019681 83 TKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTF 162 (337)
Q Consensus 83 ~~~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTl 162 (337)
.+.+++|++++||+||++|++++++++....... ..+.+++.+++++|+++++.+|+++++||||+|||||+
T Consensus 25 ~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~~--------~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVTl 96 (256)
T 3llq_A 25 QSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAFP--------ELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVSV 96 (256)
T ss_dssp ----CHHHHHHHHHHHHHHHHHHHHHHHHHTTCT--------TTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCC--------CCCccHHHHHHHHHHHHHHHHheeeccccceEchHHHH
Confidence 3456799999999999999999998765332211 23567899999999999999999999999999999999
Q ss_pred HHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhh--hhhcCCCc----cccCCcccchhhHHHHHHHHHHHHHHHH
Q 019681 163 GLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSY--YTRYGGGA----NELADGYSTGVGLAAEIIGTFVLVYTVF 236 (337)
Q Consensus 163 a~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~--~~~~~~~~----~~~~~g~s~~~~f~~E~i~TfvLv~~vl 236 (337)
++++.|+++|.+++.|++||++||++|++++|.++++. ++..+... .+.+.+++..++|+.|+++||+|+++++
T Consensus 97 a~~~~g~~~~~~~~~YiiAQ~lGA~~ga~lv~~~~~~~~~~~~~~~~~~~~~~t~p~~~s~~~~f~~E~i~Tf~Lv~~il 176 (256)
T 3llq_A 97 GLTVAGRFPASSLVPYVIAQVAGAIVAAAALYVIATGKAGIDLGGFASNGYGEHSPGGYSLVSALLIEIILTAFFLIVIL 176 (256)
T ss_dssp HHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHTTBTTCCCTTTTCCCCGGGSTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCCcccccccccccccccccCCcccCHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998532 22111111 1233467888999999999999999999
Q ss_pred HhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCCcceehhhhHHHHHHHHHHHH
Q 019681 237 SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWDDQWLFWVGPFIGAAIAAFYH 316 (337)
Q Consensus 237 ~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~~~wvywvgP~iGa~laa~~~ 316 (337)
.++|+++. ..+.|+.||++|.+++++++++||++|||||||||+++.+ +..|+++||||+||++|+++|+++|
T Consensus 177 ~~~d~~~~------~~~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGPal~~g-~~~~~~~WVy~vgPi~Ga~la~~~y 249 (256)
T 3llq_A 177 GSTHGRVP------AGFAPIAIGLALTLIHLISIPVTNTSVNPARSTGQALFVG-GWALQQLWLFWLAPIVGGAAGAVIW 249 (256)
T ss_dssp HHHSTTSC------TTCHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHHHHHC-HHHHHHTTHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCCC------ccchhHHHHHHHHHHHHHhccccccccChHHHHHHHHHcC-CCcccceeeeeeHHHHHHHHHHHHH
Confidence 99886543 3478999999999999999999999999999999999975 3457799999999999999999999
Q ss_pred HHHc
Q 019681 317 QFIL 320 (337)
Q Consensus 317 ~~~~ 320 (337)
+++.
T Consensus 250 ~~l~ 253 (256)
T 3llq_A 250 KLFG 253 (256)
T ss_dssp HHHT
T ss_pred HHhc
Confidence 9874
No 11
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=100.00 E-value=1.2e-49 Score=376.89 Aligned_cols=227 Identities=27% Similarity=0.371 Sum_probs=191.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHH
Q 019681 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (337)
Q Consensus 85 ~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~ 164 (337)
.+++|++++||+||++|+|++++++.+..... ...+.+.+++++|+++++.+|+++++||||+|||||+++
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~---------~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~ 75 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAG---------ASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIAL 75 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC---------CCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHH
Confidence 36789999999999999999988765433221 123556799999999999999999999999999999999
Q ss_pred HHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcC-----------------CCccccCCcccchhhHHHHHHH
Q 019681 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYG-----------------GGANELADGYSTGVGLAAEIIG 227 (337)
Q Consensus 165 ~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~-----------------~~~~~~~~g~s~~~~f~~E~i~ 227 (337)
++.|+++|.+++.|++||++||++|++++|.++++.++.+. ..++.+.++++..++|+.|+++
T Consensus 76 ~~~g~~~~~~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~f~t~p~~~~s~~~~~~~E~i~ 155 (281)
T 1ldf_A 76 WLFACFDKRKVIPFIVSQVAGAFCAAALVYGLYYNLFFDFEQTHHIVRGSVESVDLAGTFSTYPNPHINFVQAFAVEMVI 155 (281)
T ss_dssp HHHSCCCTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCTTSGGGHHHHTTTSCCCCTTCCHHHHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhccccccccccccccccccceeeccCCccccHHHHHHHHHHH
Confidence 99999999999999999999999999999999987653321 1122334567889999999999
Q ss_pred HHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcC----CCC------CCCc
Q 019681 228 TFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYN----KDK------AWDD 297 (337)
Q Consensus 228 TfvLv~~vl~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~----~~~------~w~~ 297 (337)
||+|+++++.++|+++.... ..+.|+.||++|.+++++++++||++|||||||||++++. ++. +|.+
T Consensus 156 Tf~Lv~~il~~~d~~~~~~~---~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~g~g~~~~~~~~~~~~ 232 (281)
T 1ldf_A 156 TAILMGLILALTDDGNGVPR---GPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPKVFAWLAGWGNVAFTGGRDIPY 232 (281)
T ss_dssp HHHHHHHHHHHHCTTSSSCC---GGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHTTTTTHHHHTTCSSCT
T ss_pred HHHHHHHHHHHhccCCCCcc---cchHHHHHHHHHHHHHHhcccccccccCcHhhHHHHHHHHhcccccccccccCCCce
Confidence 99999999999987664311 3589999999999999999999999999999999999852 122 2338
Q ss_pred ceehhhhHHHHHHHHHHHHHHHcccc
Q 019681 298 QWLFWVGPFIGAAIAAFYHQFILRAG 323 (337)
Q Consensus 298 ~wvywvgP~iGa~laa~~~~~~~~~~ 323 (337)
+||||+||++|+++|+++|+++++++
T Consensus 233 ~WVy~vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 233 FLVPLFGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp THHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred eeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999998754
No 12
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=100.00 E-value=5.9e-49 Score=365.65 Aligned_cols=231 Identities=29% Similarity=0.388 Sum_probs=191.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhheeecccc-cCCCCCCC--CCC-----CCcchhhHHHHHHHHHHHHhhhhcCcCCcccc
Q 019681 86 SFYRALIAEFIATLLFLYVTVLTVIGYKS-QTDPAKNV--DGC-----AGVGILGIAWAFGGMIFVLVYCTAGISGGHIN 157 (337)
Q Consensus 86 sl~r~~iaEfigT~llv~i~~~~vi~~~~-~~~~~~~~--~~~-----~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiN 157 (337)
+++|++++||+||++|+|+++++++.... ..+..... +.. ...+++.+++++|+++++.+|+++++||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 57899999999999999999988765431 11100000 000 12235569999999999999999999999999
Q ss_pred hhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhh-hcCCCccccCCcccchhhHHHHHHHHHHHHHHHH
Q 019681 158 PAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYT-RYGGGANELADGYSTGVGLAAEIIGTFVLVYTVF 236 (337)
Q Consensus 158 PAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~-~~~~~~~~~~~g~s~~~~f~~E~i~TfvLv~~vl 236 (337)
||||+++++.|+++|.+++.|++||++||++|++++|.+++++.. ..+.+.+.+.++.+..++++.|+++||+|+++++
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~t~p~~~~~~~~~~~~E~i~Tf~Lv~~i~ 162 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQLLGAAFGSFIFLQCAGIGAATVGGLGATAPFPGISYWQAMLAEVVGTFLLMITIM 162 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHHCTHHHHTTGGGCCCCCTTCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHHHHHHHHHHHHHHHHcCccchhcceeeeccCccccchHHHHHHHHHHHHHHHheee
Confidence 999999999999999999999999999999999999999987422 2222334444678889999999999999999999
Q ss_pred HhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHH--Hc-CCCCCCCcceehhhhHHHHHHHHH
Q 019681 237 SATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAV--IY-NKDKAWDDQWLFWVGPFIGAAIAA 313 (337)
Q Consensus 237 ~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai--~~-~~~~~w~~~wvywvgP~iGa~laa 313 (337)
...++++.. ..+.|+.||+++.+++++++++||++|||||||||++ .. +++..|++.|+||++|++|+++|+
T Consensus 163 ~~~~~~~~~-----~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa 237 (246)
T 2f2b_A 163 GIAVDERAP-----KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPYLNDMIFAGTDLWNYYSIYVIGPIVGAVLAA 237 (246)
T ss_dssp HHTTSTTSC-----TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCGGGTTHHHHHHHHHHHHHH
T ss_pred EEecCCCCC-----CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHHHHHHHcCCCCCcceEEEeeeHHHHHHHHHH
Confidence 876554432 3478999999999999999999999999999999999 33 457789999999999999999999
Q ss_pred HHHHHHcc
Q 019681 314 FYHQFILR 321 (337)
Q Consensus 314 ~~~~~~~~ 321 (337)
++|+++++
T Consensus 238 ~~y~~l~~ 245 (246)
T 2f2b_A 238 LTYQYLTS 245 (246)
T ss_dssp HHHHHHTC
T ss_pred HHHHHHcC
Confidence 99999875
No 13
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=100.00 E-value=1e-49 Score=373.12 Aligned_cols=228 Identities=20% Similarity=0.320 Sum_probs=192.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHH
Q 019681 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (337)
Q Consensus 85 ~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~ 164 (337)
++++|++++||+||++|+|++++++.+.... . ...+++.+++++|+++++.+|+++++||||+|||||+++
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~-~--------~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~ 77 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTT-G--------LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGL 77 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-S--------STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-C--------CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHH
Confidence 4678999999999999999998876543311 1 134688899999999999999999999999999999999
Q ss_pred HHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCC----CccccCCcccchhhHHHHHHHHHHHHHHHHHhcc
Q 019681 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGG----GANELADGYSTGVGLAAEIIGTFVLVYTVFSATD 240 (337)
Q Consensus 165 ~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~----~~~~~~~g~s~~~~f~~E~i~TfvLv~~vl~~~~ 240 (337)
++.|+++|.+++.|++||++||++|++++|.++++.++.... +......+++..++++.|+++||+|+++++.++|
T Consensus 78 ~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~p~~~~~~~E~i~Tf~Lv~~i~~~~d 157 (258)
T 3c02_A 78 SSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSISLTGAFFNELILTGILLLVILVVVD 157 (258)
T ss_dssp HHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTSCHHHHHHHHHHHHHHHHHHHHHHHC
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCCchHHHHHHHHHHHHHHHHHHHHHhC
Confidence 999999999999999999999999999999999987664321 1122233455667999999999999999999988
Q ss_pred CCCCCCCCCCCCch-hHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcC---CCCCC----CcceehhhhHHHHHHHH
Q 019681 241 PKRSARDSHVPVLA-PLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYN---KDKAW----DDQWLFWVGPFIGAAIA 312 (337)
Q Consensus 241 ~k~~~~~~~~~~l~-pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~---~~~~w----~~~wvywvgP~iGa~la 312 (337)
+|++... ..+. |+.||+++.+++++++++||++|||||||||+++++ ++..| +++||||+||++|+++|
T Consensus 158 ~~~~~~~---~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~~~~~~g~~~~~~~~~y~Wv~~vgP~~Ga~la 234 (258)
T 3c02_A 158 ENICGKF---HILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFLSLIAYGKDTFTKDNFYFWVPLVAPCVGSVVF 234 (258)
T ss_dssp HHHHCSC---CHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCTHHHHHHHHTTHHHHHHHHHHHHHH
T ss_pred cccCCcc---cccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHHHhccccccccccCCceeehHHHHHHHHHHHH
Confidence 7653111 3578 999999999999999999999999999999999863 23345 67999999999999999
Q ss_pred HHHHHHHcccch
Q 019681 313 AFYHQFILRAGA 324 (337)
Q Consensus 313 a~~~~~~~~~~~ 324 (337)
+++|++++.++.
T Consensus 235 ~~~y~~~~~~~~ 246 (258)
T 3c02_A 235 CQFYDKVICPLV 246 (258)
T ss_dssp HHHHHHTHHHHH
T ss_pred HHHHHHHhcccC
Confidence 999999987643
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.53 E-value=1.6e-14 Score=133.90 Aligned_cols=100 Identities=21% Similarity=0.309 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHH
Q 019681 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (337)
Q Consensus 85 ~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~ 164 (337)
.+..+.++.|+++|++|++++++.....+.. . ...++++|+.++..+++++++||+|+|||+|++.
T Consensus 141 ~~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~~~----------~----~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp 206 (246)
T 2f2b_A 141 ISYWQAMLAEVVGTFLLMITIMGIAVDERAP----------K----GFAGIIIGLTVAGIITTLGNISGSSLNPARTFGP 206 (246)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSTTSC----------T----TCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHheeeEEecCCCCC----------C----ceeeHHHHHHHHHHHhcccccCCCccCHHHHHHH
Confidence 3567899999999999999987643211110 0 1268889999999999999999999999999999
Q ss_pred HH-----hcCCchhHHHHHHHHHhHHHHHHHHHHHHhhh
Q 019681 165 FL-----ARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK 198 (337)
Q Consensus 165 ~l-----~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~ 198 (337)
.+ .++..|.+.|+||++|++|+++|+++.+.+.+
T Consensus 207 ~l~~~~~g~~~~w~~~~vy~vap~~Ga~laa~~y~~l~~ 245 (246)
T 2f2b_A 207 YLNDMIFAGTDLWNYYSIYVIGPIVGAVLAALTYQYLTS 245 (246)
T ss_dssp HHHHHHHHCCCCGGGTTHHHHHHHHHHHHHHHHHHHHTC
T ss_pred HHHHHHcCCCCCcceEEEeeeHHHHHHHHHHHHHHHHcC
Confidence 99 34668899999999999999999998877654
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.41 E-value=4.3e-13 Score=125.41 Aligned_cols=112 Identities=19% Similarity=0.124 Sum_probs=89.5
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCC
Q 019681 216 STGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAW 295 (337)
Q Consensus 216 s~~~~f~~E~i~TfvLv~~vl~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w 295 (337)
+..+.+++|+++||+|++..+...........+ ....++.+|+++.+.++..+++||+++|||++++.++. +...|
T Consensus 8 ~~~~~~laEfiGT~~Lv~~g~g~~~~~~~~~~~--~l~i~l~~Gl~v~~~i~~~g~iSGahlNPAVTla~~~~--g~~~~ 83 (263)
T 2b6o_A 8 SFWRAIFAEFFATLFYVFFGLGASLRWAPGPLH--VLQVALAFGLALATLVQAVGHISGAHVNPAVTFAFLVG--SQMSL 83 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCCCSSSCH--HHHHHHHHHHHHHHHHHHGGGTTCCCCSHHHHHHHHHT--TCSCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCcc--hHHHHHHHHHHHHHHHHHhhccCcCeeChHHHHHHHHh--cCCCH
Confidence 346789999999999999988655432111110 12468899999999999999999999999999999996 45789
Q ss_pred CcceehhhhHHHHHHHHHHHHHHHcccchhhhccCc
Q 019681 296 DDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALGSF 331 (337)
Q Consensus 296 ~~~wvywvgP~iGa~laa~~~~~~~~~~~~~~~~~~ 331 (337)
.+.|.||++|++|+++|+.+.+.+++++....++.+
T Consensus 84 ~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~ 119 (263)
T 2b6o_A 84 LRAICYVVAQLLGAVAGAAVLYSVTPPAVRGNLALN 119 (263)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHSCTTTCSSCSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccccccccccc
Confidence 999999999999999999999999976544444443
No 16
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.22 E-value=1.5e-11 Score=115.76 Aligned_cols=104 Identities=17% Similarity=0.220 Sum_probs=83.9
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHH
Q 019681 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (337)
Q Consensus 85 ~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~ 164 (337)
.+..+.++.|+++|++|++++++...... . .. -..++.+|+.+++..+..++.||+.+|||++++.
T Consensus 166 ~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~-~---------~~----~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GP 231 (279)
T 2w2e_A 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKH-R---------AT----WFAPFVIGIALLIAHLICIYYTGAGLNPARSFGP 231 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSCS-T---------TG----GGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCC-C---------Cc----CcHHHHHHHHHHHHHHhcccccccccChHHHHHH
Confidence 35678899999999999999876432111 0 01 1267888999999999999999999999999999
Q ss_pred HHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhh
Q 019681 165 FLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYT 202 (337)
Q Consensus 165 ~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~ 202 (337)
.+....-+...|+||++|++|+++|+++.+.+...++.
T Consensus 232 al~~~~~~~~~WVy~vgPiiGa~la~~ly~~l~~~~~~ 269 (279)
T 2w2e_A 232 AVAARSFPNYHWIYWLGPILGAFLAYSIWQMWKWLNYQ 269 (279)
T ss_dssp HHHHTCCCTTTTHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHhccchhhhhHHHHHHHHHHHHHHHHHHHHHccCCC
Confidence 99976444578999999999999999998888766554
No 17
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.22 E-value=1.8e-11 Score=114.48 Aligned_cols=104 Identities=21% Similarity=0.198 Sum_probs=84.5
Q ss_pred chhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCCCC
Q 019681 217 TGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKAWD 296 (337)
Q Consensus 217 ~~~~f~~E~i~TfvLv~~vl~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~w~ 296 (337)
..+.+++|+++||+|++......-.......+ .....+..|+++.+.+++.+++||+.+|||.+++.++. +...|.
T Consensus 11 ~~r~~laEfiGT~~lv~~g~g~~~~~~~~~~~--~l~ial~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~--g~~~~~ 86 (266)
T 3d9s_A 11 FLKAVFAEFLATLIFVFFGLGSALKWPSALPT--ILQIALAFGLAIGTLAQALGPVSGGHINPAITLALLVG--NQISLL 86 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCSSSCCC--HHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT--SSSCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcc--HHHHHHHHHHHHHHHHHHHcccCcceECHHHHHHHHHh--cCCCHH
Confidence 45689999999999999887554322211111 22467899999999999999999999999999999986 356899
Q ss_pred cceehhhhHHHHHHHHHHHHHHHcccch
Q 019681 297 DQWLFWVGPFIGAAIAAFYHQFILRAGA 324 (337)
Q Consensus 297 ~~wvywvgP~iGa~laa~~~~~~~~~~~ 324 (337)
+.+.||++|++|+++|+.+.+.+++.+.
T Consensus 87 ~~~~Yi~AQ~lGA~~ga~l~~~~~~~~~ 114 (266)
T 3d9s_A 87 RAFFYVAAQLVGAIAGAGILYGVAPLNA 114 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHccccc
Confidence 9999999999999999999998886543
No 18
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.18 E-value=3.4e-11 Score=110.66 Aligned_cols=100 Identities=20% Similarity=0.240 Sum_probs=81.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHH
Q 019681 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (337)
Q Consensus 85 ~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~ 164 (337)
.+..+.++.|+++|++|+++.++.. .++.. .+ ..++.+|+.++...+..++.||+.+|||++++.
T Consensus 132 ~~~~~~~~~E~i~T~~Lv~~i~~~~--d~~~~---------~~----~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGP 196 (234)
T 2o9g_A 132 YSMLSALVVELVLSAGFLLVIHGAT--DKFAP---------AG----FAPIAIGLACTLIHLISIPVTNTSVNPARSTAV 196 (234)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHT--STTSC---------TT----CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHH
T ss_pred cchHHHHHHHHHHHHHHHHHHHHhc--CCCCc---------cc----hHHHHHHHHHHHHHHHccCCCccccChHHHHHH
Confidence 3567899999999999999887642 11110 11 267888999999999999999999999999999
Q ss_pred HHhc-CCchhHHHHHHHHHhHHHHHHHHHHHHhhhh
Q 019681 165 FLAR-KVSLVRAVMYMVAQCLGAISGVGLVKAFQKS 199 (337)
Q Consensus 165 ~l~g-~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~ 199 (337)
.+.. ...|...|+||++|++|+++|+++.+.++.+
T Consensus 197 al~~g~~~~~~~Wv~~vgP~~Ga~la~~~y~~~~~~ 232 (234)
T 2o9g_A 197 AIFQGGWALEQLWFFWVVPIVGGIIGGLIYRTLLEK 232 (234)
T ss_dssp HHHHCSHHHHSHHHHHHHHHHHHHHHHHHHHHHTSC
T ss_pred HHHhCCCCCceeeeeehHHhHHHHHHHHHHHHHcCC
Confidence 9974 4467799999999999999999988877553
No 19
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.16 E-value=3.3e-11 Score=112.08 Aligned_cols=98 Identities=24% Similarity=0.305 Sum_probs=79.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHH
Q 019681 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (337)
Q Consensus 85 ~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~ 164 (337)
.+..+.++.|+++|++|++++++... ++.. .+ ..++.+|+.++...+..++.||+.+|||++++.
T Consensus 155 ~s~~~~f~~E~i~Tf~Lv~~il~~~d--~~~~---------~~----~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGP 219 (256)
T 3llq_A 155 YSLVSALLIEIILTAFFLIVILGSTH--GRVP---------AG----FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQ 219 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHS--TTSC---------TT----CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcC--CCCC---------cc----chhHHHHHHHHHHHHHhccccccccChHHHHHH
Confidence 46788999999999999998775421 1110 11 257888888888899999999999999999999
Q ss_pred HHhc-CCchhHHHHHHHHHhHHHHHHHHHHHHhh
Q 019681 165 FLAR-KVSLVRAVMYMVAQCLGAISGVGLVKAFQ 197 (337)
Q Consensus 165 ~l~g-~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~ 197 (337)
.+.. ...|...|+||++|++|+++|+++.+.+.
T Consensus 220 al~~g~~~~~~~WVy~vgPi~Ga~la~~~y~~l~ 253 (256)
T 3llq_A 220 ALFVGGWALQQLWLFWLAPIVGGAAGAVIWKLFG 253 (256)
T ss_dssp HHHHCHHHHHHTTHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHcCCCcccceeeeeeHHHHHHHHHHHHHHHhc
Confidence 9864 44577899999999999999999887764
No 20
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.16 E-value=1.7e-10 Score=109.65 Aligned_cols=113 Identities=20% Similarity=0.219 Sum_probs=87.3
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhccCC-CCCCCCCC-CCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCC
Q 019681 216 STGVGLAAEIIGTFVLVYTVFSATDPK-RSARDSHV-PVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDK 293 (337)
Q Consensus 216 s~~~~f~~E~i~TfvLv~~vl~~~~~k-~~~~~~~~-~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~ 293 (337)
+..+.+++|+++||+|++......-.- ........ .....+..|++|++..++.+++||+.+|||.+++..+. +..
T Consensus 11 ~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~~~--g~~ 88 (301)
T 2zz9_A 11 AFWKAVTAEFLAMLIFVLLSVGSTINWGGSENPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT--RKI 88 (301)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTSCCTTCC-CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCSHHHHHHHHHT--SSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccccCCCCCCcchHHHHHHHHHHHHHhhheeccCCcceeChHHHHHHHHh--cCC
Confidence 456789999999999999887433211 11111110 12467889999999999999999999999999999886 457
Q ss_pred CCCcceehhhhHHHHHHHHHHHHHHHcccchhhhccC
Q 019681 294 AWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALGS 330 (337)
Q Consensus 294 ~w~~~wvywvgP~iGa~laa~~~~~~~~~~~~~~~~~ 330 (337)
.|.....||++|++|+++|+.+-+.+++++.....+.
T Consensus 89 ~~~~~~~YiiAQ~lGAi~Ga~lv~~~~~~~~~~~~g~ 125 (301)
T 2zz9_A 89 SIAKSVFYITAQCLGAIIGAGILYLVTPPSVVGGLGV 125 (301)
T ss_dssp CTTTTHHHHHHHHHHHHHHHHHHHTTSCSCGGGTSSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhccccccCceee
Confidence 8999999999999999999999998887755443433
No 21
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.16 E-value=7.8e-11 Score=107.54 Aligned_cols=116 Identities=18% Similarity=0.196 Sum_probs=87.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHhccCC-CCCCC-CCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCCC
Q 019681 217 TGVGLAAEIIGTFVLVYTVFSATDPK-RSARD-SHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDKA 294 (337)
Q Consensus 217 ~~~~f~~E~i~TfvLv~~vl~~~~~k-~~~~~-~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~~ 294 (337)
.++.+++|+++|++|++.-....-.- +..+. ........+..|+++.+..++.+++||+.+|||.+++..+. ++..
T Consensus 3 ~~r~~~aEfiGT~~lv~~g~g~~~~~~~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~~~--g~~~ 80 (223)
T 3gd8_A 3 FWKAVTAEFLAMLIFVLLSLGSTINWGGTEKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMVCT--RKIS 80 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCCTTTTTSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHT--TSSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHHHc--CCCC
Confidence 35788999999999999777433221 11111 11123567889999999999999999999999999998886 4568
Q ss_pred CCcceehhhhHHHHHHHHHHHHHHHcccchhhhccCccCC
Q 019681 295 WDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALGSFRSQ 334 (337)
Q Consensus 295 w~~~wvywvgP~iGa~laa~~~~~~~~~~~~~~~~~~~~~ 334 (337)
|.+...|+++|++|+++|+.+-+.+++++....++.+..+
T Consensus 81 ~~~~~~Yi~AQ~lGA~~ga~lv~~~~~~~~~~~lg~~~~~ 120 (223)
T 3gd8_A 81 IAKSVFYIAAQCLGAIIGAGILYLVTPPSVVGGLGVTMVH 120 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCHHHHTTTTCCCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccccccceeeccCC
Confidence 9999999999999999999988888876554444444433
No 22
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.14 E-value=3.5e-11 Score=114.47 Aligned_cols=106 Identities=23% Similarity=0.285 Sum_probs=82.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHH
Q 019681 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (337)
Q Consensus 85 ~sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~ 164 (337)
.+..+.++.|+++||+|++++++.....+.... ..+ ....++.+|+.+++..++++++||+.+|||++++.
T Consensus 182 ~s~~~~f~~E~i~TfiLv~~Il~~~d~~~~~~~--------~~~-~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GP 252 (304)
T 3cn5_A 182 YNKGTALGAEIIGTFVLVYTVFSATDPKRSARD--------SHV-PILAPLPIGFAVFMVHLATIPITGTGINPARSFGA 252 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTEEEEEESTT--------SCC-EEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhheecCccCCCC--------ccc-ccchHHHHHHHHHHHHHhccCCCccccChHHHHHH
Confidence 356789999999999999998854321111100 000 11257888889999999999999999999999999
Q ss_pred HHh--cCCchhHHHHHHHHHhHHHHHHHHHHHHhhhh
Q 019681 165 FLA--RKVSLVRAVMYMVAQCLGAISGVGLVKAFQKS 199 (337)
Q Consensus 165 ~l~--g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~ 199 (337)
.+. +...|...|+||++|++|+++|+++.+.++.+
T Consensus 253 al~~~~~~~w~~~WvywvgPiiGa~laa~~y~~l~~~ 289 (304)
T 3cn5_A 253 AVIFNSNKVWDDQWIFWVGPFIGAAVAAAYHQYVLRA 289 (304)
T ss_dssp HHHHCCHHHHHHTTHHHHHHHHHHHHHHHHHHTTSCC
T ss_pred HHHHccCCCcCceEEEeehHHHHHHHHHHHHHHHhCC
Confidence 998 23478999999999999999999988877653
No 23
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.13 E-value=8.3e-11 Score=110.31 Aligned_cols=111 Identities=17% Similarity=0.247 Sum_probs=83.8
Q ss_pred chhhHHHHHHHHHHHHHHHHHhc---c-CC--CCCCCCC-CCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHc
Q 019681 217 TGVGLAAEIIGTFVLVYTVFSAT---D-PK--RSARDSH-VPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIY 289 (337)
Q Consensus 217 ~~~~f~~E~i~TfvLv~~vl~~~---~-~k--~~~~~~~-~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~ 289 (337)
..+.+++|+++|++|++...... . +. +...... ......+..|+++.+..++.+++||+.+|||.+++..+.
T Consensus 10 ~~r~~~aEflGT~llv~~g~g~~~~~~~~~~~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~~- 88 (271)
T 1j4n_A 10 FWRAVVAEFLAMILFIFISIGSALGFHYPIKSNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPAVTLGLLLS- 88 (271)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHGGGCCCSSCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHT-
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHHHHHHHHHc-
Confidence 45689999999999998765321 1 10 0111100 023468899999999999999999999999999999986
Q ss_pred CCCCCCCcceehhhhHHHHHHHHHHHHHHHcccchhhhcc
Q 019681 290 NKDKAWDDQWLFWVGPFIGAAIAAFYHQFILRAGAVKALG 329 (337)
Q Consensus 290 ~~~~~w~~~wvywvgP~iGa~laa~~~~~~~~~~~~~~~~ 329 (337)
+...|.+...||++|++|+++|+.+-+.++.+.+....+
T Consensus 89 -g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~g 127 (271)
T 1j4n_A 89 -CQISVLRAIMYIIAQCVGAIVATAILSGITSSLPDNSLG 127 (271)
T ss_dssp -TSSCHHHHHHHHHHHHHHHHHHHHHHHHHTTTCTTCCTT
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHHHHHHHccCCcccccc
Confidence 357899999999999999999999888887654333333
No 24
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.12 E-value=1e-10 Score=112.40 Aligned_cols=100 Identities=21% Similarity=0.282 Sum_probs=79.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHHH
Q 019681 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (337)
Q Consensus 86 sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~~ 165 (337)
+..+.++.|+++||+|++++++.... +.. . ..+. .++++|+.+.+.....++.||+.+|||++|+..
T Consensus 172 s~~~~f~~E~i~Tf~Lv~~Ila~~d~-~~~-~-------~~~~----~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPa 238 (340)
T 3iyz_A 172 TAGHGLLVELIITFQLVFTIFASCDD-KRT-D-------VTGS----VALAIGFSVAIGHLFAINYTGASMNPARSFGPA 238 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcC-ccC-C-------cccc----hhhHHHHHHHHHHHhccCCccccccHHHHHHHH
Confidence 56789999999999999998764321 111 0 0111 466777777777777779999999999999999
Q ss_pred HhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhh
Q 019681 166 LARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKS 199 (337)
Q Consensus 166 l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~ 199 (337)
+... .|...|+||+++++|+++|+++.+.++.+
T Consensus 239 l~~~-~w~~~WVywvgPiiGailaallY~~l~~p 271 (340)
T 3iyz_A 239 VIMG-NWENHWIYWVGPIIGAVLAGALYEYVFCP 271 (340)
T ss_pred HHcc-CCCcEeehhHHHHHHHHHHHHHHHHHhCC
Confidence 9865 68899999999999999999998887753
No 25
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.06 E-value=2.7e-10 Score=107.33 Aligned_cols=103 Identities=18% Similarity=0.216 Sum_probs=80.8
Q ss_pred HHHHHHHHHHHHHHHHHHHhhheeecccccCCCCCCCCCCCCcchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHHH
Q 019681 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (337)
Q Consensus 86 sl~r~~iaEfigT~llv~i~~~~vi~~~~~~~~~~~~~~~~~~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~~ 165 (337)
+..+.++.|+++|++|++++++... +++..+ ..-..++.+|+.++...+..++.||+.+|||++++..
T Consensus 144 s~~~~~~~E~i~Tf~Lv~~il~~~d--~~~~~~----------~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 211 (281)
T 1ldf_A 144 NFVQAFAVEMVITAILMGLILALTD--DGNGVP----------RGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPK 211 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHC--TTSSSC----------CGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc--cCCCCc----------ccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHH
Confidence 5688999999999999999876432 111100 0112678889999999999999999999999999998
Q ss_pred Hhc------CCchh------HHHHHHHHHhHHHHHHHHHHHHhhhhh
Q 019681 166 LAR------KVSLV------RAVMYMVAQCLGAISGVGLVKAFQKSY 200 (337)
Q Consensus 166 l~g------~~s~~------~a~~Yi~AQ~lGai~ga~lv~~~~~~~ 200 (337)
+.. ...|. ..|+||+++++|+++|+++.+.+..++
T Consensus 212 l~~~~~g~g~~~~~~~~~~~~~WVy~vgPi~Ga~la~~~y~~l~~~~ 258 (281)
T 1ldf_A 212 VFAWLAGWGNVAFTGGRDIPYFLVPLFGPIVGAIVGAFAYRKLIGRH 258 (281)
T ss_dssp HHHHHTTTTTHHHHTTCSSCTTHHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred HHHHhcccccccccccCCCceeeHHhHHHHHHHHHHHHHHHHHhCcc
Confidence 864 12333 689999999999999999988887654
No 26
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.03 E-value=1.6e-10 Score=107.61 Aligned_cols=104 Identities=22% Similarity=0.227 Sum_probs=81.9
Q ss_pred cchhhHHHHHHHHHHHHHHHHHhcc--CCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhhHHHHHHcCCCC
Q 019681 216 STGVGLAAEIIGTFVLVYTVFSATD--PKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARSLGAAVIYNKDK 293 (337)
Q Consensus 216 s~~~~f~~E~i~TfvLv~~vl~~~~--~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~lg~ai~~~~~~ 293 (337)
+..+.+++|+++||+|++....... .+.+...+ .....+..|+++.+..++.+++||+.+|||.+++..+. +..
T Consensus 8 ~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~~~~~--~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~~~~--g~~ 83 (258)
T 3c02_A 8 SYVREFIGEFLGTFVLMFLGEGATANFHTTGLSGD--WYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGLSSI--NKF 83 (258)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSTTC--HHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHHT--TSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCcc--HHHHHHHHHHHHHHHHheecccCcCeeChHHHHHHHHh--CCC
Confidence 3466899999999999997543211 11111111 22357888999999999999999999999999999886 457
Q ss_pred CCCcceehhhhHHHHHHHHHHHHHHHcccc
Q 019681 294 AWDDQWLFWVGPFIGAAIAAFYHQFILRAG 323 (337)
Q Consensus 294 ~w~~~wvywvgP~iGa~laa~~~~~~~~~~ 323 (337)
.|.+...||++|++|+++|+.+-+.+++++
T Consensus 84 ~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~ 113 (258)
T 3c02_A 84 DLKKIPVYFFAQLLGAFVGTSTVYGLYHGF 113 (258)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHHHHTHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHcchh
Confidence 899999999999999999999988888765
No 27
>3kcu_A Probable formate transporter 1; TCDB ID 2.A.44.1.1, channel, cell inner membrane, cell membrane, membrane, transmembrane; HET: MA5; 2.24A {Escherichia coli O157} PDB: 3kcv_A 3q7k_A
Probab=88.84 E-value=10 Score=35.18 Aligned_cols=109 Identities=12% Similarity=0.093 Sum_probs=60.3
Q ss_pred hhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhh--hhhhhcCCC
Q 019681 130 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK--SYYTRYGGG 207 (337)
Q Consensus 130 ~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~--~~~~~~~~~ 207 (337)
.+..++.++..+...+++.+..-=+ |--.+ -..+.+|++|.+.+--|.-=.+|=++|+.++-.+.. ..+...++.
T Consensus 68 ~ll~g~~F~vGL~lVvl~G~ELFTg--n~l~~-~a~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~~ 144 (285)
T 3kcu_A 68 KLVGGICFSLGLILCVVCGADLFTS--TVLIV-VAKASGRITWGQLAKNWLNVYFGNLVGALLFVLLMWLSGEYMTANGQ 144 (285)
T ss_dssp HHHHHHHHTHHHHHHHHHTCCCTTT--THHHH-HHHTTTCCCHHHHTTTHHHHHHHHHHHHHHHHHHHHHHTGGGTTTTH
T ss_pred HHHHHHHHHHHHHHHHHhCcccccc--chHHH-HHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccCchH
Confidence 4555666666666666666553322 32223 335578899988766665555666666655443321 111110110
Q ss_pred --cc-----ccCCcccchhhHHHHHHHHHHHHHHHHHhccC
Q 019681 208 --AN-----ELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 241 (337)
Q Consensus 208 --~~-----~~~~g~s~~~~f~~E~i~TfvLv~~vl~~~~~ 241 (337)
.. .-.-..+..+.|+-=++|.++.++.++.....
T Consensus 145 ~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~~a 185 (285)
T 3kcu_A 145 WGLNVLQTADHKVHHTFIEAVCLGILANLMVCLAVWMSYSG 185 (285)
T ss_dssp HHHHHHHHHHHTTCSCHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 00 00123466778888899999999888865543
No 28
>3kly_A Putative formate transporter 1; membrane protein, channel, structural genomics, PSI-2, protein structure initiative; HET: BOG; 2.10A {Vibrio cholerae} PDB: 3klz_A*
Probab=83.56 E-value=22 Score=32.77 Aligned_cols=108 Identities=13% Similarity=0.106 Sum_probs=62.3
Q ss_pred hhhHHHHHHHHHHHHhhhhcC-cCCcccchhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhh--hhhhhcCC
Q 019681 130 ILGIAWAFGGMIFVLVYCTAG-ISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQK--SYYTRYGG 206 (337)
Q Consensus 130 ~l~ia~a~G~~v~~li~~~~~-iSGaHiNPAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~--~~~~~~~~ 206 (337)
.+..++.++..+...+++.+. .+|-.+ .++ ..+.+|.+|.+.+--|.-=.+|=++|+.++-.+.. ..+...++
T Consensus 67 ~ll~g~~F~vGL~lVvl~g~ELFTgn~l---~~~-~~~~~~is~~~~lr~W~~v~~gNliGal~~a~l~~~s~~~~~~~~ 142 (280)
T 3kly_A 67 KLLGGLAFSLGLILVVITGGELFTSSVL---ILV-AKASGKISWKELVRNWTVVYFGNLCGSIILVFIMLATRQFMEDGG 142 (280)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCCTTTTCC---CCS-SSSSSSCCSSSHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGTTTT
T ss_pred HHHHHHHHHHHHHHHHHccccccccchH---HHH-HHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCCch
Confidence 445566666666666666555 344333 232 34568889888877777666777777665444421 11111011
Q ss_pred C--cc-----ccCCcccchhhHHHHHHHHHHHHHHHHHhccC
Q 019681 207 G--AN-----ELADGYSTGVGLAAEIIGTFVLVYTVFSATDP 241 (337)
Q Consensus 207 ~--~~-----~~~~g~s~~~~f~~E~i~TfvLv~~vl~~~~~ 241 (337)
. .. .-.-..+..+.|+-=++|.++.++.++.....
T Consensus 143 ~~~~~~~~ia~~K~~~~~~~~f~~GIlcN~lVclaVw~~~~a 184 (280)
T 3kly_A 143 QLGLNAMAISQHKLHHTFLQAFALGLMCNILVCLAVWMTFSA 184 (280)
T ss_dssp HHHHHHHHHHHTTSCCCHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 0 00 01123466778888899999999888865543
No 29
>3tds_E Formate/nitrite transporter; membrane protein; HET: PG4 BOG; 1.98A {Clostridium difficile} PDB: 3tdo_A* 3tdr_A* 3te0_A* 3tdx_A* 3te2_A* 3te1_A* 3tdp_A*
Probab=74.46 E-value=28 Score=31.91 Aligned_cols=185 Identities=10% Similarity=0.085 Sum_probs=91.2
Q ss_pred cchhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhhhhhcCCC
Q 019681 128 VGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSYYTRYGGG 207 (337)
Q Consensus 128 ~g~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~~~~~~~~ 207 (337)
...+..++.++..+...+++.+..-=+ |-.......+.++.+|.+.+--|.-=.+|=++|+.++-.+....-. ...+
T Consensus 62 ~~~ll~g~~F~~Gl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~sg~-~~~~ 138 (268)
T 3tds_E 62 MTKIVMGLSFAIALSLVIMTGTELFTG--NNMVMSAGMLNKGVSIKDTSKIWAYSWVGNLIGALVLGIIFVGTGL-VDKG 138 (268)
T ss_dssp THHHHHHHTCTHHHHHHHHHTCCCHHH--HHHHHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTT-TSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhCcccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc-CCCc
Confidence 334555666665555555544432111 4332334457789999988877777777777777665444321100 0010
Q ss_pred c-c----cc---CCcccchhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccch
Q 019681 208 A-N----EL---ADGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINP 279 (337)
Q Consensus 208 ~-~----~~---~~g~s~~~~f~~E~i~TfvLv~~vl~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NP 279 (337)
. . .. .-..+..+.|+-=++|.++..+.++.....|.. .-.-+.|-+-+++ +....+.=...|=
T Consensus 139 ~~~~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~~~k~~-------~gKi~~i~~pi~~--Fv~~GfEH~VANm 209 (268)
T 3tds_E 139 PVAEFFANTAASKASMPFTALFFRGILCNILVCVSVLCSFRTNSD-------TAKIIMIFLCLFA--IITSGFEHSVANM 209 (268)
T ss_dssp HHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHHHHHHHHSCSCH-------HHHHHHHHHHHHH--HHHHTCCCHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcCch-------hhHHHHHHHHHHH--HHHccchHHHHHH
Confidence 0 0 00 112455677888888999888888755433211 0112222222222 2222233223332
Q ss_pred HhhHHHHHHcCC--CCCCCcc---eeh-hhhHHHHHH-HHHHHHHHHcccchh
Q 019681 280 ARSLGAAVIYNK--DKAWDDQ---WLF-WVGPFIGAA-IAAFYHQFILRAGAV 325 (337)
Q Consensus 280 Ar~lg~ai~~~~--~~~w~~~---wvy-wvgP~iGa~-laa~~~~~~~~~~~~ 325 (337)
. -+...++.+. +..|.+. +++ .+|.++|+. +-++.|.++++.+..
T Consensus 210 ~-~~~~~~~~~~~~~~t~~~~~~nlipvtlGNiiGG~~fvgl~y~~~~~~~~~ 261 (268)
T 3tds_E 210 T-IYSVSLFSPTISTVTIGGAIYNLVAVTLGNIVGGALFMGLGTYILGKEKLN 261 (268)
T ss_dssp H-HHHHHHHSSSCCSCCHHHHHHHHHHHHHHHHHHHHTTHHHHHHHHHCCC--
T ss_pred H-HHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccc
Confidence 1 1222333332 3445432 222 368888774 556777778766543
No 30
>4fc4_A Nitrite transporter NIRC; alpha-helical inner membrane protein, ION channel, cytoplasm membrane, transport protein; HET: BOG; 2.40A {Salmonella enterica subsp}
Probab=59.29 E-value=1e+02 Score=27.88 Aligned_cols=181 Identities=10% Similarity=0.033 Sum_probs=85.9
Q ss_pred hhhHHHHHHHHHHHHhhhhcCcCCcccchhhhHHHHHhcCCchhHHHHHHHHHhHHHHHHHHHHHHhhhhh-hhhcCCC-
Q 019681 130 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMYMVAQCLGAISGVGLVKAFQKSY-YTRYGGG- 207 (337)
Q Consensus 130 ~l~ia~a~G~~v~~li~~~~~iSGaHiNPAVTla~~l~g~~s~~~a~~Yi~AQ~lGai~ga~lv~~~~~~~-~~~~~~~- 207 (337)
.+..++.++..+...+++.+..-=+ |-.......+.++.+|.+.+--|.-=.+|=++|+.++-.+.... .......
T Consensus 58 ~ll~g~~F~vGl~lVvl~g~eLfTg--n~l~~~~~~~~~~~s~~~~lr~W~~v~~gNliGa~~~a~l~~~~g~~~~~~~~ 135 (261)
T 4fc4_A 58 PLVMGATFGIALTLVIIAGSELFTG--HTMFLTLGVKAGTISHGQMWAILPQTWLGNLVGSVFVALLYSWGGGSLLPVDT 135 (261)
T ss_dssp HHHHHHHTTHHHHHHHHTCCCCHHH--HHHHHHHHHHHTSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTSSCTT
T ss_pred HHHHHHHHHHHHHHHHHcCCccccc--chHHHHHHHHcCCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccCchHH
Confidence 3445666655555555444332111 43333334556889999888777666667777666544443321 0000110
Q ss_pred cc--ccC---CcccchhhHHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCchhHHHHHHHHHHHHHhhCCCcCccchHhh
Q 019681 208 AN--ELA---DGYSTGVGLAAEIIGTFVLVYTVFSATDPKRSARDSHVPVLAPLPIGFAVFMVHLATIPITGTGINPARS 282 (337)
Q Consensus 208 ~~--~~~---~g~s~~~~f~~E~i~TfvLv~~vl~~~~~k~~~~~~~~~~l~pl~IGl~v~~~~~~~~~~TG~~~NPAr~ 282 (337)
.. ... -..+..+.|+-=++|.++..+.++.....+.. . .-+.|-+-+++- ....+.=...|=. -
T Consensus 136 ~~~~~ia~~K~~~~~~~~f~~gIlcN~lVclaVw~~~~~~~~------g--Ki~~i~~pi~~F--v~~GfEH~VANm~-~ 204 (261)
T 4fc4_A 136 SIVHSVALAKTTAPATVLFFKGALCNWLVCLAIWMAIRTEGT------A--KFLAIWWCLLAF--IASGYEHSVANMT-L 204 (261)
T ss_dssp SHHHHHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHHTCCHH------H--HHHHHHHHHHHH--HHHTCCCHHHHHH-H
T ss_pred HHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHHHHhhccch------h--hhhHHHHHHHHH--HHccchHHHHhHH-H
Confidence 00 000 12345677888888888888888754433211 1 122222222222 2223332333321 1
Q ss_pred HHHHHHcCC--CCCCCcce---eh-hhhHHHHHH-HHHHHHHHHcccc
Q 019681 283 LGAAVIYNK--DKAWDDQW---LF-WVGPFIGAA-IAAFYHQFILRAG 323 (337)
Q Consensus 283 lg~ai~~~~--~~~w~~~w---vy-wvgP~iGa~-laa~~~~~~~~~~ 323 (337)
+...++.+. +..|.+.+ ++ .+|.++|+. +-++.|.+.++.+
T Consensus 205 ~~~~~~~g~~~~~t~~~~~~nlipvtlGNiiGG~~fvgl~y~~~~~~~ 252 (261)
T 4fc4_A 205 FALSWFGHHSDAYTLAGIGHNLLWVTLGNTLSGVVFMGLGYWYATPKS 252 (261)
T ss_dssp HHHHHHTTCCTTCCHHHHHHHHHHHHHHHHHHHHTTTHHHHHHHC---
T ss_pred HHHHHHhCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccc
Confidence 223333332 23454322 22 368888774 4567777777554
No 31
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=45.41 E-value=3.8 Score=38.51 Aligned_cols=22 Identities=32% Similarity=0.523 Sum_probs=17.7
Q ss_pred hcCcCCcccchhhhHHHHHhcC
Q 019681 148 TAGISGGHINPAVTFGLFLARK 169 (337)
Q Consensus 148 ~~~iSGaHiNPAVTla~~l~g~ 169 (337)
.++=||||++||++++-.+..+
T Consensus 8 ~~GGTgGHi~palala~~L~~~ 29 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQAR 29 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHHT
T ss_pred EcCCCHHHHHHHHHHHHHHHhC
Confidence 3444789999999999998743
No 32
>2yvc_D Neprilysin; protein-peptide complex, cell adhesion; 3.20A {Mus musculus}
Probab=25.99 E-value=18 Score=20.90 Aligned_cols=14 Identities=36% Similarity=0.311 Sum_probs=7.9
Q ss_pred eeccccCCchhhHh
Q 019681 4 FISHTKNKPKKRKR 17 (337)
Q Consensus 4 ~~~~~~~~~~~~~~ 17 (337)
=||.-|-|||.||.
T Consensus 11 dinapkpkkk~rws 24 (26)
T 2yvc_D 11 DINAPKPKKKQRXX 24 (26)
T ss_pred cccCCCcchhhccc
Confidence 35555566666663
Done!