Query 019683
Match_columns 337
No_of_seqs 147 out of 414
Neff 6.3
Searched_HMMs 13730
Date Mon Mar 25 05:31:43 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019683.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019683hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wkqa_ c.97.1.2 (A:) Guanine 73.2 4.5 0.00033 32.1 7.2 15 74-88 54-68 (158)
2 d2g84a1 c.97.1.2 (A:1-189) Put 69.8 3.7 0.00027 33.7 6.0 41 35-86 48-88 (189)
3 d1wwra1 c.97.1.2 (A:1-151) tRN 54.9 19 0.0014 27.9 7.5 15 131-145 73-87 (151)
4 d1p6oa_ c.97.1.2 (A:) Cytosine 51.5 9.2 0.00067 30.2 5.0 15 131-145 80-94 (156)
5 d1qr0a1 d.150.1.1 (A:1-101) 4' 32.2 15 0.0011 26.5 3.0 46 79-137 45-90 (101)
6 d1bdsa_ g.9.1.1 (A:) BDs-I def 18.4 14 0.0011 22.1 0.4 8 188-195 8-15 (43)
7 d2cqea1 g.66.1.1 (A:458-513) Z 15.9 50 0.0037 21.5 2.7 28 54-81 8-35 (56)
8 d1nbja_ g.3.3.2 (A:) Cycloviol 11.0 10 0.00074 21.4 -1.7 9 198-206 17-25 (30)
9 d1mxaa1 d.130.1.1 (A:1-102) S- 9.0 76 0.0055 22.9 2.1 18 4-21 16-33 (102)
10 d1lmra_ g.3.6.3 (A:) ADO1 {Ass 8.4 83 0.0061 17.9 1.6 17 52-68 6-22 (35)
No 1
>d1wkqa_ c.97.1.2 (A:) Guanine deaminase GuaD {Bacillus subtilis [TaxId: 1423]}
Probab=73.25 E-value=4.5 Score=32.15 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=11.4
Q ss_pred hHHHHHHHHHHHHHH
Q 019683 74 SHAEIVARRALLRFF 88 (337)
Q Consensus 74 ~HAEVLARR~f~r~L 88 (337)
.|||++|.|...+.|
T Consensus 54 ~HAE~~ai~~a~~~~ 68 (158)
T d1wkqa_ 54 AHAEVTAIRKACKVL 68 (158)
T ss_dssp CCHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhc
Confidence 599999998764443
No 2
>d2g84a1 c.97.1.2 (A:1-189) Putative deaminase NE0047 {Nitrosomonas europaea [TaxId: 915]}
Probab=69.79 E-value=3.7 Score=33.74 Aligned_cols=41 Identities=27% Similarity=0.250 Sum_probs=22.4
Q ss_pred EEEEEEeeCCCCeEEEEEeeCCCcccCCccCCCCCccchhHHHHHHHHHHHH
Q 019683 35 LAAFLISSPSKDLEVVALGTGTKCIGRSLLSPHGDIVNDSHAEIVARRALLR 86 (337)
Q Consensus 35 LA~iVl~~~~~~~~vvslgTGtKc~~~~~l~~~G~~lhD~HAEVLARR~f~r 86 (337)
++|+|+.. ++-+||+-|.-. ...+|+... |||++|.|-.-+
T Consensus 48 ~GaviV~~--~~g~Iia~g~N~-------~~~~~dpt~--HAEi~AI~~A~~ 88 (189)
T d2g84a1 48 FAAAVFER--DSGLLIAAGTNR-------VVPGRCSAA--HAEILALSLAQA 88 (189)
T ss_dssp CEEEEEET--TTCBEEEEEECC-------TTTTTCTTC--CHHHHHHHHHHH
T ss_pred EEEEEEEC--CCCEEEEEEcCC-------cCcCCCCcc--cHHHHHHHHHHH
Confidence 45555532 335888876533 111222221 999999876533
No 3
>d1wwra1 c.97.1.2 (A:1-151) tRNA adenosine deaminase TadA {Aquifex aeolicus [TaxId: 63363]}
Probab=54.91 E-value=19 Score=27.89 Aligned_cols=15 Identities=33% Similarity=0.560 Sum_probs=11.4
Q ss_pred EEEEeccCCCCcccc
Q 019683 131 LHLYISQLPCGDASL 145 (337)
Q Consensus 131 lhLYiS~~PCGDAsi 145 (337)
.-||+|-.||--++.
T Consensus 73 ~tlY~TlEPC~mC~~ 87 (151)
T d1wwra1 73 CELYVTLEPCIMCSY 87 (151)
T ss_dssp EEEEESSCCBHHHHH
T ss_pred cEeeecccCCcHHHH
Confidence 458999999966544
No 4
>d1p6oa_ c.97.1.2 (A:) Cytosine deaminase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=51.45 E-value=9.2 Score=30.21 Aligned_cols=15 Identities=27% Similarity=0.472 Sum_probs=11.3
Q ss_pred EEEEeccCCCCcccc
Q 019683 131 LHLYISQLPCGDASL 145 (337)
Q Consensus 131 lhLYiS~~PCGDAsi 145 (337)
.-||+|-.||-.++.
T Consensus 80 ~tlyvTlEPC~mC~~ 94 (156)
T d1p6oa_ 80 TTLYTTLSPCDMCTG 94 (156)
T ss_dssp EEEEEEECCCHHHHH
T ss_pred eEEEeeccCCHHHHH
Confidence 358999999965444
No 5
>d1qr0a1 d.150.1.1 (A:1-101) 4'-Phosphopantetheinyl transferase SFP {Bacillus subtilis [TaxId: 1423]}
Probab=32.21 E-value=15 Score=26.48 Aligned_cols=46 Identities=17% Similarity=0.113 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHhhhccCCCccccccCCCCCeeeeeCCCCceeeeCCcEEEEEecc
Q 019683 79 VARRALLRFFYTEVLNKQKCSNGIEGLRDDVFNNFLFELGPTGKYRFREGWQLHLYISQ 137 (337)
Q Consensus 79 LARR~f~r~L~~el~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~Lk~~v~lhLYiS~ 137 (337)
|+-|.|+|+++.+.... ...++.|..++.||-.|...-.+||=+|+
T Consensus 45 l~~r~llr~~l~~~~~~-------------~p~~i~~~~~~~GKP~l~~~~~i~FNiSH 90 (101)
T d1qr0a1 45 LLGDVLVRSVISRQYQL-------------DKSDIRFSTQEYGKPCIPDLPDAHFNISH 90 (101)
T ss_dssp HHHHHHHHHHHHHHTTC-------------CGGGCCCEECTTSCEECTTCTTCEEEEEE
T ss_pred HHHHHHHHHHHHHHhCC-------------CccceeEEeCCCCCccccCCCCcEEEecc
Confidence 44566778877654332 11345677778887666544446666665
No 6
>d1bdsa_ g.9.1.1 (A:) BDs-I defensin {Sea anemone (Anemonia sulcata) [TaxId: 6108]}
Probab=18.39 E-value=14 Score=22.14 Aligned_cols=8 Identities=75% Similarity=1.294 Sum_probs=6.2
Q ss_pred eCCCCCCc
Q 019683 188 RKPGRGDT 195 (337)
Q Consensus 188 tKPGRgd~ 195 (337)
-||||||-
T Consensus 8 gkpgrgdl 15 (43)
T d1bdsa_ 8 GKPGRGDL 15 (43)
T ss_dssp SCCSCCEE
T ss_pred CCCCCCcE
Confidence 48999983
No 7
>d2cqea1 g.66.1.1 (A:458-513) Zinc finger CCCH domain-containing protein C19orf7 (KIAA1064) {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.90 E-value=50 Score=21.47 Aligned_cols=28 Identities=18% Similarity=0.254 Sum_probs=19.6
Q ss_pred eCCCcccCCccCCCCCccchhHHHHHHH
Q 019683 54 TGTKCIGRSLLSPHGDIVNDSHAEIVAR 81 (337)
Q Consensus 54 TGtKc~~~~~l~~~G~~lhD~HAEVLAR 81 (337)
||+||+.++.=...=.-|.|---|+|+.
T Consensus 8 tg~kCy~gd~C~FSH~pLt~~t~~lL~K 35 (56)
T d2cqea1 8 TTGNCINGDDCMFSHDPLTEETRELLDK 35 (56)
T ss_dssp HTSCCSSCTTCSSBCCCCCHHHHHHHHH
T ss_pred cCCcccCCCcccccCCccCHHHHHHHHH
Confidence 8999998775433336888877777654
No 8
>d1nbja_ g.3.3.2 (A:) Cycloviolacin O1 {Plant (Viola odorata) [TaxId: 97441]}
Probab=10.98 E-value=10 Score=21.38 Aligned_cols=9 Identities=33% Similarity=0.918 Sum_probs=6.4
Q ss_pred ccchhHHHH
Q 019683 198 SVSCSDKIA 206 (337)
Q Consensus 198 smSCSDKl~ 206 (337)
--|||||.+
T Consensus 17 gc~c~~kvc 25 (30)
T d1nbja_ 17 GCSCSNRVC 25 (30)
T ss_dssp TCEEETTEE
T ss_pred cccccCcee
Confidence 447898864
No 9
>d1mxaa1 d.130.1.1 (A:1-102) S-adenosylmethionine synthetase {Escherichia coli [TaxId: 562]}
Probab=9.00 E-value=76 Score=22.94 Aligned_cols=18 Identities=22% Similarity=0.154 Sum_probs=15.4
Q ss_pred cchHHHHHHHHHHHHhcC
Q 019683 4 ECWGDEVSKKVLWQYKSL 21 (337)
Q Consensus 4 ~~~ad~Ia~~v~~~y~~L 21 (337)
+.++|+|++++++.|-+.
T Consensus 16 DKicDqISDaIlD~~L~~ 33 (102)
T d1mxaa1 16 DKIADQISDAVLDAILEQ 33 (102)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred cHHHHHHHHHHHHHHHHh
Confidence 358999999999999765
No 10
>d1lmra_ g.3.6.3 (A:) ADO1 {Assassin bug (Agriosphodrus dohrni) [TaxId: 184613]}
Probab=8.39 E-value=83 Score=17.89 Aligned_cols=17 Identities=35% Similarity=0.710 Sum_probs=11.8
Q ss_pred EeeCCCcccCCccCCCC
Q 019683 52 LGTGTKCIGRSLLSPHG 68 (337)
Q Consensus 52 lgTGtKc~~~~~l~~~G 68 (337)
|--|+||++..+-.-.|
T Consensus 6 lprgskclgenkqcc~~ 22 (35)
T d1lmra_ 6 LPRGSKCLGENKQCCKG 22 (35)
T ss_dssp CCTTCCCSSCCCCCCTT
T ss_pred ccccccccccchhhccC
Confidence 45689999987655444
Done!