BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019691
(337 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|356509167|ref|XP_003523323.1| PREDICTED: uncharacterized protein LOC100787572 [Glycine max]
Length = 369
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 223/356 (62%), Positives = 261/356 (73%), Gaps = 37/356 (10%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNSN------------DHSKERSG-----N 43
MAVAEN GAKI SS+Q+L++ +VS+DS +V+ S +H + G N
Sbjct: 1 MAVAENVGAKIGSSSQSLENGLVSADSGEVEKSKTKGDQNLNNGVFNHQERVPGTMPVPN 60
Query: 44 GNANIQIQ---NGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNP 100
GN + + Q NG G G G V + +N GESFK +MRDL ++LSKLNP
Sbjct: 61 GNFSYKAQMHANGVNNDGYGMNG----VTSGENG-----GESFKR-DMRDLEELLSKLNP 110
Query: 101 MAAEFVPPSLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQ 159
MA EFVPPSLAN F GPN GFGYTNN I+ T+ NTNG T RR++NGY+
Sbjct: 111 MAEEFVPPSLANTHGF-----LAGPNAGFGYTNNIILPTN-YGNTNGQTNNRRRKNGYNP 164
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
GKRRMN + +++E+IRRTVYVSDIDQ VTEEQLA LFL CGQVVDCR+CGDPNS+LR
Sbjct: 165 GKRRMNNKMDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILR 224
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FAFVEFTDEEGARAALSL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY
Sbjct: 225 FAFVEFTDEEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 284
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
CTNIDKK+TQ D+K FFES+CGEV RLRLLGDY HSTRIAFVEFA+ + +C
Sbjct: 285 CTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAALSC 340
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 275 EREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESA 334
Query: 232 RAALSLAGTMLGFYPVRVLPSKT 254
AALS +G +LG P+RV PSKT
Sbjct: 335 IAALSCSGVILGSLPIRVSPSKT 357
>gi|356516142|ref|XP_003526755.1| PREDICTED: uncharacterized protein LOC100800126 [Glycine max]
Length = 369
Score = 419 bits (1078), Expect = e-115, Method: Compositional matrix adjust.
Identities = 218/348 (62%), Positives = 257/348 (73%), Gaps = 21/348 (6%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGA- 59
MAV EN GAKI SS+Q+L++ VVS+DS +V+ S + NG N Q Q+ +T PG
Sbjct: 1 MAVVENVGAKIGSSSQSLENGVVSADSGEVEKSKTRGDQDMNNGVFNHQ-QHQETVPGTM 59
Query: 60 ---GAGGGFVNVNASDNH--------MERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPP 108
+ + N +N E GESFK +MRDL ++LSKLNPMA EFVPP
Sbjct: 60 PVPNGNFSYKHANGVNNDGYGMNGVMSEENGGESFKR-DMRDLEELLSKLNPMAEEFVPP 118
Query: 109 SLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCR 167
SLAN GPN GFGYTNNFI+ + NTNG T RR++NGY+ GKRRMN +
Sbjct: 119 SLANTHGL-----LAGPNAGFGYTNNFIL-PNNYGNTNGQTNNRRRKNGYNPGKRRMNHK 172
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
+++E+IRRTVYVSDIDQ VTEEQLA LFL CGQVVDCR+CGDPNS+LRFAF+EFTD
Sbjct: 173 MDMEKREEMIRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNSILRFAFIEFTD 232
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+EGARAALSL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK+
Sbjct: 233 DEGARAALSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKL 292
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
TQ D+K FFES+CGEV RLRLLGDY HSTRIAFVEFA+ + +C
Sbjct: 293 TQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESAIAALSC 340
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 275 EREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYHHSTRIAFVEFALAESA 334
Query: 232 RAALSLAGTMLGFYPVRVLPSKT 254
AALS +G +LG P+RV PSKT
Sbjct: 335 IAALSCSGVILGSLPIRVSPSKT 357
>gi|357464151|ref|XP_003602357.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
gi|355491405|gb|AES72608.1| Splicing factor, arginine/serine-rich [Medicago truncatula]
Length = 384
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 217/347 (62%), Positives = 251/347 (72%), Gaps = 29/347 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDT---VVSSDSNDVQNSNDHSKERSGNGNA-NIQIQNGQTK 56
MAVAEN GAKI SS+QNLD+ VSSDS +V+ S + + N + N Q QNG
Sbjct: 1 MAVAENVGAKIGSSSQNLDNNNNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYS 60
Query: 57 PGAGAGGGFVNVNASDNHM---------------ERKMGESFKDCEMRDLVDMLSKLNPM 101
G ++ N NH GESFK EMRDL ++LSKLNPM
Sbjct: 61 FKTHQMGQ-MHANGVQNHQFVVNNDGYVMNGLRNGENGGESFKR-EMRDLEELLSKLNPM 118
Query: 102 AAEFVPPSLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYS-Q 159
A EFVPPSL N N GP GFGY NNFI+ + AN NG T RR++NGY+
Sbjct: 119 AEEFVPPSLTN----NHGYLAAGPAAGFGYPNNFIL-LNNYANANGQTN-RRRKNGYTTN 172
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
GKRR N + +++E+IRRTVYVSDIDQ VTEEQLA+LFL CGQVVDCR+CGDPNS+LR
Sbjct: 173 GKRRANHKVDMEKREEMIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILR 232
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FAF+EFTDEE ARAA+SL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY
Sbjct: 233 FAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 292
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
CTNIDKK+TQ D+K FFES+CGEV RLRLLGDYQHSTRIAFVEFA++
Sbjct: 293 CTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVI 339
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 12/104 (11%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFT----- 226
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD R AFVEF
Sbjct: 283 EREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVIFFA 342
Query: 227 ---DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
E A AALS +G +LG P+RV PSKT PV PRS
Sbjct: 343 SFFQAESAIAALSCSGVILGALPIRVSPSKT---PVRARSSPRS 383
>gi|356516140|ref|XP_003526754.1| PREDICTED: uncharacterized protein LOC100799585 [Glycine max]
Length = 378
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 218/359 (60%), Positives = 256/359 (71%), Gaps = 34/359 (9%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNS-------NDHSKERSG----------- 42
MAVAEN GAKI SS+QNL+++VVSSDS +V+ S ND K +G
Sbjct: 1 MAVAENVGAKIGSSSQNLENSVVSSDSGEVEKSKPRSGSINDDQKLNNGVFNHQDRVPGT 60
Query: 43 ----NGNANIQIQNGQTKPGA--GAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLS 96
N N N Q GQ G G V + +N GESFK +MRDL ++LS
Sbjct: 61 MPVPNSNYNYNAQMGQMHANGVNNDGYGMNGVMSGENE-----GESFKR-DMRDLEELLS 114
Query: 97 KLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNG 156
KLNPMA EFVPPSL+N + P GFGY NNFI+ + N NG T RR++NG
Sbjct: 115 KLNPMAEEFVPPSLSNTHGYLAGPGAG--AGFGYPNNFIL-LNNFGNANGQTN-RRRKNG 170
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS 216
Y+QGKRR+N + +++E+ RRTVYVSDIDQ VTEEQLA LFL CGQVVDCR+CGDPNS
Sbjct: 171 YNQGKRRVNHKMDMEKREEMTRRTVYVSDIDQLVTEEQLAALFLNCGQVVDCRVCGDPNS 230
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
+LRFAF+EFTDEEGARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSR
Sbjct: 231 ILRFAFIEFTDEEGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSR 290
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
TIYCTNIDKK+TQ D+K FFES+CGEVQRLRLLGDY HSTRIAFVEF + + +C
Sbjct: 291 TIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESAIAALSC 349
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R AFVEFT E A
Sbjct: 284 EREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESA 343
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
AALS +G +LG P+RV PSKT +
Sbjct: 344 IAALSCSGVILGSLPIRVSPSKTPV 368
>gi|255582539|ref|XP_002532053.1| RNA-binding protein, putative [Ricinus communis]
gi|223528275|gb|EEF30325.1| RNA-binding protein, putative [Ricinus communis]
Length = 385
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 218/356 (61%), Positives = 253/356 (71%), Gaps = 41/356 (11%)
Query: 1 MAVAENAGAKIDSSNQNLDDTV--VSSDSNDVQNSND------HSKERSG------NGNA 46
MAVAENAGAK +S QN D TV VSSDSND++ S +SKE N N+
Sbjct: 1 MAVAENAGAKNATSGQNFDSTVTVVSSDSNDLERSKPRNESLVNSKESKDDDDVAVNNNS 60
Query: 47 NIQIQ----NG------------QTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRD 90
++Q NG Q + A + NH ++ +M D
Sbjct: 61 KCELQESVTNGTQMQKRFDTSEQQQQIVAKSVVVNGGGGYGTNHQIQRAKSDNGLNDMSD 120
Query: 91 LVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD-GTANTNGHTT 149
LV++LS LNPMA EFVPPSL N N + G NGFGYTNNF T+ G A N T
Sbjct: 121 LVEILSNLNPMAKEFVPPSLVN------NHGYLG-NGFGYTNNFPAQTNPGNAIGN---T 170
Query: 150 TRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
+RK+N ++QG+RRMN RTS AQ+++VIRRTVYVSDIDQQVTEEQLA LF+ CGQVVDCR
Sbjct: 171 IKRKKNSFNQGRRRMNTRTSMAQREDVIRRTVYVSDIDQQVTEEQLAGLFVHCGQVVDCR 230
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSED 269
ICGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LGFYP+RVLPSKTAIAPVNPTFLPRSED
Sbjct: 231 ICGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGFYPLRVLPSKTAIAPVNPTFLPRSED 290
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
EREMC+RT+YCTNIDKKVTQ D++LFFES CGEVQRLRLLGDY HSTRIAFVEF +
Sbjct: 291 EREMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEFTV 346
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RTVY ++ID++VT+ + F + CG+V R+ GD + R AFVEFT E A
Sbjct: 293 EMCARTVYCTNIDKKVTQADVRLFFESFCGEVQRLRLLGDYHHSTRIAFVEFTVAESAIL 352
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
AL+ +G +LG P+RV PSKT PV P +PRS
Sbjct: 353 ALNCSGAVLGSLPIRVSPSKT---PVRPR-IPRS 382
>gi|388492572|gb|AFK34352.1| unknown [Medicago truncatula]
Length = 376
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 215/356 (60%), Positives = 251/356 (70%), Gaps = 29/356 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDT---VVSSDSNDVQNSNDHSKERSGNGNA-NIQIQNGQTK 56
MAVAEN GAKI SS+QNLD+ VSSDS +V+ S + + N + N Q QNG
Sbjct: 1 MAVAENVGAKIGSSSQNLDNNNNHAVSSDSTEVEKSKPRTDQDVNNNSVFNHQHQNGNYS 60
Query: 57 PGAGAGGGFVNVNASDNHM---------------ERKMGESFKDCEMRDLVDMLSKLNPM 101
G ++ N NH GESFK EMRDL ++LSKLNPM
Sbjct: 61 FKTHQMGQ-MHANGVQNHQFVVNNDGYVMNGLRNGENGGESFKR-EMRDLEELLSKLNPM 118
Query: 102 AAEFVPPSLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYS-Q 159
A EFVPPSL N + GP GFGY NNFI+ + AN NG T RR++NGY+
Sbjct: 119 AEEFVPPSLTNNHGY----LAAGPAAGFGYPNNFIL-LNNYANANGQTN-RRRKNGYTTN 172
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
GKRR N + +++E+IRRTVY SDIDQ VTEEQLA+LFL CGQVVDCR+C DPNS+LR
Sbjct: 173 GKRRANHKVDMEKREEMIRRTVYASDIDQLVTEEQLASLFLNCGQVVDCRVCRDPNSILR 232
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FAF+EFTDEE ARAA+SL+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY
Sbjct: 233 FAFIEFTDEESARAAVSLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 292
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
CTNIDKK+TQ D+K FFES+CGEV RLRLLGDYQHSTRIAFVEFA+ + +C
Sbjct: 293 CTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVAESAIAALSC 348
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD R AFVEF E A
Sbjct: 283 EREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVAESA 342
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
AALS +G +LG P+RV PSKT PV PRS
Sbjct: 343 IAALSCSGVILGALPIRVSPSKT---PVRARSSPRS 375
>gi|225455232|ref|XP_002272223.1| PREDICTED: uncharacterized protein LOC100245327 [Vitis vinifera]
gi|302143972|emb|CBI23077.3| unnamed protein product [Vitis vinifera]
Length = 361
Score = 390 bits (1003), Expect = e-106, Method: Compositional matrix adjust.
Identities = 216/358 (60%), Positives = 251/358 (70%), Gaps = 49/358 (13%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNS--NDHSKERSGNGNANIQIQNGQTKP- 57
MAV ENAG K+ SS+ N + S+D+ND S ++H+ + N+Q +N +KP
Sbjct: 1 MAVVENAGNKVGSSSANSE----SADTNDFGQSQPSNHTVMQ------NLQQKNTNSKPI 50
Query: 58 ------------------GAGAGGGFVNVNASDNHMERKMGESFKDC-EMRDLVDMLSKL 98
AG+ G + M G +D ++RDL D+LSKL
Sbjct: 51 LLPNDENYYSQKIPQFQQKAGSNG------VAKIQMVGSFGRDREDGGDIRDLEDLLSKL 104
Query: 99 NPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD-GTANTNGHTTTRRKRNGY 157
NPMA EFVPPSLANG ++ AF GYTNNF++ + G AN N RRKRN Y
Sbjct: 105 NPMAEEFVPPSLANGHGWSAGAAF------GYTNNFVLQANFGNANGNA---GRRKRNNY 155
Query: 158 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
+Q KRR+N RTS AQ++EVI+RTVYVSDIDQQVTEE LA LF+ CGQVVDCRICGDPNSV
Sbjct: 156 NQ-KRRINSRTSMAQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSV 214
Query: 218 LRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
LRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPRSEDEREMC+RT
Sbjct: 215 LRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCART 274
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
IYCTNIDKKVTQ ++KLFFES+CGEV RLRLLGDY HSTRIAFVEF M + C
Sbjct: 275 IYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 332
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ ++ F + CG+V R+ GD + R AFVEF E A
Sbjct: 267 EREMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESA 326
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 327 IAALNCSGAILGSLPIRVSPSKTPVRPRAP 356
>gi|357464159|ref|XP_003602361.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355491409|gb|AES72612.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 384
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 213/361 (59%), Positives = 254/361 (70%), Gaps = 32/361 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDV---------QNSNDHSKERSGNGNANIQIQ 51
MAVAEN G KIDSS++NLD++VVSSDS +V QN N +S + G N Q Q
Sbjct: 1 MAVAENVGTKIDSSSENLDNSVVSSDSTEVVEKSKPKTDQNLNTNSVNTNVVGVINHQQQ 60
Query: 52 NGQTKPGAG---------AGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMA 102
+ G G G N + D + GESFK EMRDL ++LSKLNPMA
Sbjct: 61 DSVPNGNHGFIAHQMSQMHGNGVQNQHLVDGYGGNG-GESFKR-EMRDLEELLSKLNPMA 118
Query: 103 AEFVPPSLANGQIFNFNPAFF-GPN-GFGY-TNNFIMHTDGTANTNGHTTT-----RRKR 154
EFVPPSL + N++ GPN GFGY NNF++ + T RR++
Sbjct: 119 EEFVPPSL----VTNYHGYLAAGPNAGFGYPNNNFMLQNNFGNANANATANNGQINRRRK 174
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
NGY+ KRR+ + +++E+IRRTVYVSDIDQQVTEEQLA LFL CGQVVDCR+CGDP
Sbjct: 175 NGYNNAKRRVYHKMDMEKREEMIRRTVYVSDIDQQVTEEQLAALFLNCGQVVDCRVCGDP 234
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
NS+LRFAFVEFTDE GARAAL+L+GTMLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMC
Sbjct: 235 NSILRFAFVEFTDEVGARAALNLSGTMLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMC 294
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHA 334
+RTIYCTN+DKK+TQ D+K FFES+CGEVQRLRLLGDY HSTRIAFVEFA+ + +
Sbjct: 295 TRTIYCTNLDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFAVAESAIAALS 354
Query: 335 C 335
C
Sbjct: 355 C 355
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y +++D+++T+ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 290 EREMCTRTIYCTNLDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFAVAESA 349
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
AALS +G +LG P+RV PSKT +
Sbjct: 350 IAALSCSGVVLGSLPIRVSPSKTPV 374
>gi|449438861|ref|XP_004137206.1| PREDICTED: uncharacterized protein LOC101204595 [Cucumis sativus]
Length = 403
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 210/382 (54%), Positives = 259/382 (67%), Gaps = 55/382 (14%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSND---VQN--------------SNDHSKERSGN 43
MAVAEN G KI S +Q LD+T+VSSDSND V+N S+ H N
Sbjct: 1 MAVAENVGPKIGSPSQTLDNTLVSSDSNDPNHVENQKPMNDSTLPINADSDFHPNPNDQN 60
Query: 44 GNANIQIQN--------------------GQTKPGAGAGGGFVNVNASDNH-MERKM--- 79
+ +Q+ GQ + G + VN++ + M ++
Sbjct: 61 LQKKVHLQDRAAAATSFSLPSPNFKPQMGGQMQNGFETNPQSLMVNSASAYGMNQRPNGV 120
Query: 80 ------GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNN 133
G++FK +MRDL ++LSKLNPMA EFVPPSLA NF+ F G G GYTN+
Sbjct: 121 INGADGGDTFKR-DMRDLEELLSKLNPMAEEFVPPSLAK----NFSGYFTGA-GLGYTND 174
Query: 134 FIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEE 193
F++ + N ++ RRK+NG+SQG+RRMN + + ++DE+ RRTVYVSDIDQQVTEE
Sbjct: 175 FLLQPNSVNNEGNNS--RRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEE 232
Query: 194 QLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK 253
LAT+F +CG+VVDCRICGDPNS+L FAF+EFTDEEGARA+L+L+GT+LGFYPVRVLPSK
Sbjct: 233 LLATVFASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSK 292
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
TAIAPVNP FLPRS+DEREMCSRTIYCTNIDKKVTQ ++KLFFES+CGEVQRLRLLGDY
Sbjct: 293 TAIAPVNPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYH 352
Query: 314 HSTRIAFVEFAMVSEPFSWHAC 335
HSTRIAFVEF M + C
Sbjct: 353 HSTRIAFVEFTMAESAIAALNC 374
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RT+Y ++ID++VT+ ++ F + CG+V R+ GD + R AFVEFT E A A
Sbjct: 311 EMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESAIA 370
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG P+RV PSKT + P +P
Sbjct: 371 ALNCSGVVLGSLPIRVSPSKTPVRPRSP 398
>gi|147804944|emb|CAN62612.1| hypothetical protein VITISV_033249 [Vitis vinifera]
Length = 369
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/298 (66%), Positives = 222/298 (74%), Gaps = 32/298 (10%)
Query: 33 SNDHSKERSGNGNANIQIQNGQTKPGAG---AGGGFVNVNASDNHMERKMGESFKDCEMR 89
S H+ +RS I +QN Q P A + GG + N G+S D MR
Sbjct: 93 SVQHNLDRS----QKIGVQNMQVGPVAAQHRSNGGXLQRN----------GDSGVD--MR 136
Query: 90 DLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTT 149
+L ++ SKLNPMA EFVPPSLAN G NG Y+N H + NG
Sbjct: 137 ELQELFSKLNPMAEEFVPPSLANN----------GLNGGFYSNGSETHNN---TRNGQVN 183
Query: 150 TRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
RRK+N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR
Sbjct: 184 GRRKKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCR 243
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSED 269
+CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+ED
Sbjct: 244 VCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNED 303
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVS 327
EREMC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF M+S
Sbjct: 304 EREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMIS 361
>gi|359474160|ref|XP_002272303.2| PREDICTED: polyadenylate-binding protein [Vitis vinifera]
Length = 398
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 196/303 (64%), Positives = 223/303 (73%), Gaps = 26/303 (8%)
Query: 33 SNDHSKERSGNGNANIQIQNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLV 92
S H+ +RS I +QN Q P A ++ H++R G+S D MR+L
Sbjct: 93 SVQHNLDRS----QKIGVQNMQVGPVAAQH------RSNGGHLQRN-GDSGVD--MRELQ 139
Query: 93 DMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRR 152
++ SKLNPMA EFVPPSLAN G NG Y+N H + NG RR
Sbjct: 140 ELFSKLNPMAEEFVPPSLANN----------GLNGGFYSNGSETHNN---TRNGQVNGRR 186
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
K+N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR+CG
Sbjct: 187 KKNNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCG 246
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
DPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDERE
Sbjct: 247 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDERE 306
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSW 332
MC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF M +
Sbjct: 307 MCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIAA 366
Query: 333 HAC 335
C
Sbjct: 367 LNC 369
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 228
N + E+ RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF
Sbjct: 301 NEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMA 360
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTF 263
E A AAL+ +G +LG P+RV PSKT + P P
Sbjct: 361 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 395
>gi|297742454|emb|CBI34603.3| unnamed protein product [Vitis vinifera]
Length = 397
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 196/303 (64%), Positives = 222/303 (73%), Gaps = 27/303 (8%)
Query: 33 SNDHSKERSGNGNANIQIQNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLV 92
S H+ +RS I +QN Q P A ++ H++R G+S D MR+L
Sbjct: 93 SVQHNLDRS----QKIGVQNMQVGPVAAQH------RSNGGHLQRN-GDSGVD--MRELQ 139
Query: 93 DMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRR 152
++ SKLNPMA EFVPPSLAN G NG Y+N H + NG RR
Sbjct: 140 ELFSKLNPMAEEFVPPSLANN----------GLNGGFYSNGSETHNN---TRNGQVNGRR 186
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
K N + QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEE+LA LF+TCGQVVDCR+CG
Sbjct: 187 K-NNFGQGKRRMNSRTSMAQREEIIRRTVYVSDIDQQVTEEKLAALFITCGQVVDCRVCG 245
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
DPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPR+EDERE
Sbjct: 246 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRNEDERE 305
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSW 332
MC+RTIYCTNIDKKV+Q D+KLFFESVCGEV RLRLLGDY HSTRIAFVEF M +
Sbjct: 306 MCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMAESAIAA 365
Query: 333 HAC 335
C
Sbjct: 366 LNC 368
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 57/95 (60%), Gaps = 1/95 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 228
N + E+ RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF
Sbjct: 300 NEDEREMCARTIYCTNIDKKVSQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFIMA 359
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTF 263
E A AAL+ +G +LG P+RV PSKT + P P
Sbjct: 360 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRAPRL 394
>gi|255555781|ref|XP_002518926.1| RNA-binding protein, putative [Ricinus communis]
gi|223541913|gb|EEF43459.1| RNA-binding protein, putative [Ricinus communis]
Length = 379
Score = 369 bits (948), Expect = e-100, Method: Compositional matrix adjust.
Identities = 193/318 (60%), Positives = 227/318 (71%), Gaps = 13/318 (4%)
Query: 26 DSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKD 85
D ++ NS+DH + N +I IQ K + + V +H +R G
Sbjct: 38 DHSNHNNSHDHGRSLIEN---SISIQPLYMKAQVQSPPPNLQVAQLHHHHQRSSGGGDLQ 94
Query: 86 CEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFG---YTNN-----FIMH 137
++R+L ++ SKLNPMA EFVPPSLAN +I N G NG YTNN M
Sbjct: 95 RDIRELQELFSKLNPMAEEFVPPSLANNKISN--NYIHGLNGLNVGFYTNNNNYDPAFML 152
Query: 138 TDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
T+ + N + + R++ Y+QGKRR+N RTS AQ++E+IRRTVYVSDIDQQVTEEQLA
Sbjct: 153 TNASRNGQLNGSAARRKKNYNQGKRRLNSRTSMAQREEIIRRTVYVSDIDQQVTEEQLAA 212
Query: 198 LFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIA 257
LF+ CGQVVDCRICGDPNSVLRFAF+EFT EEGARAAL+LAGT+LG+YPVRVLPSKTAIA
Sbjct: 213 LFVGCGQVVDCRICGDPNSVLRFAFIEFTHEEGARAALNLAGTVLGYYPVRVLPSKTAIA 272
Query: 258 PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR 317
PVNPTFLPRS+DEREMC RTIYCTNIDKKVTQ D+KLFFESVCGEV RLRLLGDY HSTR
Sbjct: 273 PVNPTFLPRSDDEREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTR 332
Query: 318 IAFVEFAMVSEPFSWHAC 335
IAFVEF M + C
Sbjct: 333 IAFVEFVMAESAIAALNC 350
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 285 EREMCIRTIYCTNIDKKVTQADVKLFFESVCGEVYRLRLLGDYHHSTRIAFVEFVMAESA 344
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 345 IAALNCSGVVLGSLPIRVSPSKTPVRPRAP 374
>gi|449483221|ref|XP_004156526.1| PREDICTED: poly(U)-binding-splicing factor half pint-like [Cucumis
sativus]
Length = 316
Score = 366 bits (939), Expect = 9e-99, Method: Compositional matrix adjust.
Identities = 177/256 (69%), Positives = 211/256 (82%), Gaps = 8/256 (3%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD 139
G++FK +MRDL ++LSKLNPMA EFVPPSLA NF+ F G G GYTN+F++ +
Sbjct: 40 GDTFKR-DMRDLEELLSKLNPMAEEFVPPSLAK----NFSGYFTGA-GLGYTNDFLLQPN 93
Query: 140 GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 199
N ++ RRK+NG+SQG+RRMN + + ++DE+ RRTVYVSDIDQQVTEE LAT+F
Sbjct: 94 SVNNEGNNS--RRKKNGFSQGRRRMNNKMNAVKRDEMTRRTVYVSDIDQQVTEELLATVF 151
Query: 200 LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+CG+VVDCRICGDPNS+L FAF+EFTDEEGARA+L+L+GT+LGFYPVRVLPSKTAIAPV
Sbjct: 152 ASCGEVVDCRICGDPNSILHFAFIEFTDEEGARASLNLSGTVLGFYPVRVLPSKTAIAPV 211
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
NP FLPRS+DEREMCSRTIYCTNIDKKVTQ ++KLFFES+CGEVQRLRLLGDY HSTRIA
Sbjct: 212 NPDFLPRSDDEREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIA 271
Query: 320 FVEFAMVSEPFSWHAC 335
FVEF M + C
Sbjct: 272 FVEFTMAESAIAALNC 287
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 59/90 (65%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ ++ F + CG+V R+ GD + R AFVEFT E A
Sbjct: 222 EREMCSRTIYCTNIDKKVTQAEVKLFFESLCGEVQRLRLLGDYHHSTRIAFVEFTMAESA 281
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P +P
Sbjct: 282 IAALNCSGVVLGSLPIRVSPSKTPVRPRSP 311
>gi|297809287|ref|XP_002872527.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
gi|297318364|gb|EFH48786.1| RNA-binding protein 37 [Arabidopsis lyrata subsp. lyrata]
Length = 336
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 202/340 (59%), Positives = 231/340 (67%), Gaps = 39/340 (11%)
Query: 1 MAVAENAGAKIDSSNQNL----DDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTK 56
MAV E+ GA L + V+S + V ++NDH G I + G
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGVSSNNDH-------GGNEIHGEIG--- 50
Query: 57 PGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIF 116
V+V SD ESFK +MR+L ++LSKLNPMA EFVPPSL +
Sbjct: 51 ---------VHVARSDGD------ESFKR-DMRELHELLSKLNPMAKEFVPPSLTKPVVN 94
Query: 117 NFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
FN FF N GFG NF ++ DG RRK++ QGKRRMN RTS AQ++E
Sbjct: 95 GFNGGFFAVNNGFGAAGNFPVNEDGG--------FRRKKSFGQQGKRRMNPRTSLAQREE 146
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDIDQQVTEEQLA LF+ GQVVDCRICGDPNSVLRFAF+EFTDE GARAAL
Sbjct: 147 IIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARAAL 206
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
SL+GTMLGFYPV+V+PSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ DIKLF
Sbjct: 207 SLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQADIKLF 266
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
FESVCGEV RLRLLGDY H TRI FVEF M + C
Sbjct: 267 FESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNC 306
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R FVEF E A
Sbjct: 241 EREMCARTIYCTNIDKKLTQADIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESA 300
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 268
AAL+ +G +LG P+RV PSKT PV +PR +
Sbjct: 301 IAALNCSGVLLGSLPIRVSPSKT---PVRSRAVPRHQ 334
>gi|297819578|ref|XP_002877672.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
gi|297323510|gb|EFH53931.1| hypothetical protein ARALYDRAFT_485298 [Arabidopsis lyrata subsp.
lyrata]
Length = 351
Score = 364 bits (935), Expect = 3e-98, Method: Compositional matrix adjust.
Identities = 200/349 (57%), Positives = 235/349 (67%), Gaps = 41/349 (11%)
Query: 1 MAVAENAGAKIDSSN-QNLDDTVVSSDSNDVQNSNDHSKERSGNGNA------------- 46
MAVAENAG K+DSS+ QNLD+ S+ +D +S + N
Sbjct: 1 MAVAENAGVKVDSSSGQNLDNNTDSATETKPPCPDDDQSPKSDSSNPPTIDSTPETDDRI 60
Query: 47 NIQIQNGQTKPGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFV 106
N Q GQT GF + GE + E++DL D SKLNPMA EFV
Sbjct: 61 NETAQKGQTL------NGF-----------NRNGERDNNGEIKDLADAFSKLNPMAQEFV 103
Query: 107 PPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNC 166
PPSLA Q F NG G+TNNF A+ N H TRR+ + QGKRR+N
Sbjct: 104 PPSLARSQSGVFR------NGLGFTNNFAAPPK-LADGNDHFPTRRR--SFGQGKRRINK 154
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 226
RTS AQ+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAF+EFT
Sbjct: 155 RTSLAQKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFT 214
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
+EEGARAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDEREMC RT+YCTNIDK+
Sbjct: 215 NEEGARAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKR 274
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
+TQ D+K+FFE +CGEV RLR LGDY H TRIAFVEFAM + C
Sbjct: 275 ITQIDLKVFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHC 322
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/95 (45%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RTVY ++ID+++T+ L F + CG+V R+ GD + R AFVEF E A A
Sbjct: 260 EMCVRTVYCTNIDKRITQIDLKVFFEMLCGEVHRLRL-GDYHHQTRIAFVEFAMAESAIA 318
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 268
AL +G +LG P+RV PSKT PV P F PR++
Sbjct: 319 ALHCSGIVLGALPIRVSPSKT---PVRPHF-PRAD 349
>gi|224118386|ref|XP_002317806.1| predicted protein [Populus trichocarpa]
gi|222858479|gb|EEE96026.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 185/265 (69%), Positives = 212/265 (80%), Gaps = 10/265 (3%)
Query: 72 DNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYT 131
D+ + + +S +M DLV+MLSKLNPMA EFVPPSLAN +P FFG
Sbjct: 9 DDQIHHQRAKSNGVNDMNDLVEMLSKLNPMAEEFVPPSLAN------HPGFFGNGFGFNA 62
Query: 132 NNFIMHTD-GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQV 190
NNF++ + G AN T RRK+N Y+QG+RRMN RTS AQ+DE+I+RTVYVSDIDQQV
Sbjct: 63 NNFLVQINNGIANGQ---TNRRKKNSYNQGRRRMNNRTSMAQRDEIIKRTVYVSDIDQQV 119
Query: 191 TEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVL 250
TEEQLA LF+ CGQVVDCRICGDPNSVLRFAFVEFTDEEGAR ALSL+GT+LGFYP+RVL
Sbjct: 120 TEEQLAGLFIHCGQVVDCRICGDPNSVLRFAFVEFTDEEGARTALSLSGTVLGFYPLRVL 179
Query: 251 PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG 310
PSKTAIAPVNPTFLPRSEDEREMC+RT+YCTNIDKK+TQ D++LFFES CGEV RLRLLG
Sbjct: 180 PSKTAIAPVNPTFLPRSEDEREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLG 239
Query: 311 DYQHSTRIAFVEFAMVSEPFSWHAC 335
DY HSTRIAFVEFA+ + C
Sbjct: 240 DYHHSTRIAFVEFAVAESAIAALNC 264
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 53/83 (63%), Gaps = 1/83 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++ID+++T+ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 199 EREMCARTVYCTNIDKKITQADVRLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAVAESA 258
Query: 232 RAALSLAGTMLGFYPVRVLPSKT 254
AAL+ +G +LG P+RV PSKT
Sbjct: 259 IAALNCSGAVLGSLPIRVSPSKT 281
>gi|15235177|ref|NP_192799.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|4115925|gb|AAD03436.1| contains similarity to RNA recognition motifs (Pfam: PF00076,
Score=5.5e-23, N=2) [Arabidopsis thaliana]
gi|4539439|emb|CAB40027.1| RNA-binding protein [Arabidopsis thaliana]
gi|4959384|gb|AAD34325.1| RNA-binding protein [Arabidopsis thaliana]
gi|7267758|emb|CAB78184.1| RNA-binding protein [Arabidopsis thaliana]
gi|14517528|gb|AAK62654.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|18700204|gb|AAL77712.1| AT4g10610/T4F9_70 [Arabidopsis thaliana]
gi|21592407|gb|AAM64358.1| RNA-binding protein [Arabidopsis thaliana]
gi|332657507|gb|AEE82907.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 336
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 200/340 (58%), Positives = 232/340 (68%), Gaps = 39/340 (11%)
Query: 1 MAVAENAGAKIDSSNQNL----DDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTK 56
MAV E+ GA L + V+S + ++NDH GNG I + G
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDHG----GNG---IHDEIG--- 50
Query: 57 PGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIF 116
V+V SD GESFK +MR+L ++LSKLNPMA EF+PPSL +
Sbjct: 51 ---------VHVARSDG------GESFKR-DMRELHELLSKLNPMAKEFIPPSLTKPVVN 94
Query: 117 NFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
FN FF N GF NF ++ DG+ RRK++ QGKRRMN RTS AQ++E
Sbjct: 95 GFNGGFFAVNNGFVAAGNFPVNEDGS--------FRRKKSFGQQGKRRMNPRTSLAQREE 146
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDIDQQVTEEQLA LF+ GQVVDCRICGDPNSVLRFAF+EFTDE GAR AL
Sbjct: 147 IIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTAL 206
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ DIKLF
Sbjct: 207 NLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLF 266
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
FESVCGEV RLRLLGDY H TRI FVEF M + C
Sbjct: 267 FESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNC 306
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R FVEF E A
Sbjct: 241 EREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESA 300
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 268
AAL+ +G +LG P+RV PSKT PV +PR +
Sbjct: 301 IAALNCSGVLLGSLPIRVSPSKT---PVRSRAIPRHQ 334
>gi|79325059|ref|NP_001031614.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
gi|332657508|gb|AEE82908.1| CTC-interacting domain 12 protein [Arabidopsis thaliana]
Length = 326
Score = 360 bits (923), Expect = 7e-97, Method: Compositional matrix adjust.
Identities = 200/340 (58%), Positives = 232/340 (68%), Gaps = 39/340 (11%)
Query: 1 MAVAENAGAKIDSSNQNL----DDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTK 56
MAV E+ GA L + V+S + ++NDH GNG I + G
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDHG----GNG---IHDEIG--- 50
Query: 57 PGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIF 116
V+V SD GESFK +MR+L ++LSKLNPMA EF+PPSL +
Sbjct: 51 ---------VHVARSDG------GESFKR-DMRELHELLSKLNPMAKEFIPPSLTKPVVN 94
Query: 117 NFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
FN FF N GF NF ++ DG+ RRK++ QGKRRMN RTS AQ++E
Sbjct: 95 GFNGGFFAVNNGFVAAGNFPVNEDGSF--------RRKKSFGQQGKRRMNPRTSLAQREE 146
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDIDQQVTEEQLA LF+ GQVVDCRICGDPNSVLRFAF+EFTDE GAR AL
Sbjct: 147 IIRRTVYVSDIDQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTAL 206
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ DIKLF
Sbjct: 207 NLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLF 266
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
FESVCGEV RLRLLGDY H TRI FVEF M + C
Sbjct: 267 FESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIAALNC 306
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R FVEF E A
Sbjct: 241 EREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESA 300
Query: 232 RAALSLAGTMLGFYPVR 248
AAL+ +G +LG P+R
Sbjct: 301 IAALNCSGVLLGSLPIR 317
>gi|15229132|ref|NP_190508.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|79314662|ref|NP_001030833.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|12324442|gb|AAG52182.1|AC012329_9 putative RNA-binding protein; 38450-35693 [Arabidopsis thaliana]
gi|6723409|emb|CAB66418.1| RNA-binding-like protein [Arabidopsis thaliana]
gi|222424104|dbj|BAH20012.1| AT3G49390 [Arabidopsis thaliana]
gi|332645014|gb|AEE78535.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
gi|332645015|gb|AEE78536.1| CTC-interacting domain 10 protein [Arabidopsis thaliana]
Length = 353
Score = 359 bits (922), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 232/344 (67%), Gaps = 29/344 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGAG 60
MAVAENAG K+DSS QNLD+ ++ + + ++S +++ + T
Sbjct: 1 MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDSTP---- 56
Query: 61 AGGGFVNVNASDNHMERKM---------GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLA 111
+ N +K+ GE + E++DL D SKLNPMA EFVPPSLA
Sbjct: 57 ------ETDDRINETAQKVQTLNGFSGNGERDNNGEIKDLADAFSKLNPMAQEFVPPSLA 110
Query: 112 NGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNA 171
Q NG G+TNNF A+ N H R+R + QGKRRMN RTS A
Sbjct: 111 RSQSGVLR------NGLGFTNNFAAPPK-LADGNDHFP--RRRRSFGQGKRRMNKRTSLA 161
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
Q+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAF+EFT+EEGA
Sbjct: 162 QKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGA 221
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
RAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDEREMC RT+YCTNIDK++TQ D
Sbjct: 222 RAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQID 281
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
+K FFE +CGEV RLR LGDY H TRIAFVEFAM + C
Sbjct: 282 LKGFFEMLCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHC 324
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RTVY ++ID+++T+ L F + CG+V R+ GD + R AFVEF E A A
Sbjct: 262 EMCVRTVYCTNIDKRITQIDLKGFFEMLCGEVHRLRL-GDYHHQTRIAFVEFAMAESAIA 320
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 268
AL +G +LG P+RV PSKT PV P F PR+E
Sbjct: 321 ALHCSGIVLGALPIRVSPSKT---PVRPHF-PRAE 351
>gi|110737686|dbj|BAF00782.1| RNA-binding - like protein [Arabidopsis thaliana]
Length = 353
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 192/344 (55%), Positives = 231/344 (67%), Gaps = 29/344 (8%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGAG 60
MAVAENAG K+DSS QNLD+ ++ + + ++S +++ + T
Sbjct: 1 MAVAENAGVKVDSSGQNLDNNNTAASATETTKPPCPDDDQSPKSDSSTPLTIDSTP---- 56
Query: 61 AGGGFVNVNASDNHMERKM---------GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLA 111
+ N +K+ GE + E++DL D SKLNPMA EFVPPSLA
Sbjct: 57 ------ETDDRINETAQKVQTLNGFSGNGERDNNGEIKDLADAFSKLNPMAQEFVPPSLA 110
Query: 112 NGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNA 171
Q NG G+TNNF A+ N H R+R + QGKRRMN RTS A
Sbjct: 111 RSQSGVLR------NGLGFTNNFAAPPK-LADGNDHFP--RRRRSFGQGKRRMNKRTSLA 161
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
Q+D+VIRRTVYVSDIDQQVTEE LA +F+ CGQVVDCR+CGDPNSVLRFAF+EFT+EEGA
Sbjct: 162 QKDDVIRRTVYVSDIDQQVTEENLAGVFINCGQVVDCRVCGDPNSVLRFAFIEFTNEEGA 221
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
RAALS++GT+LGFYP++VLPSKTAIAPVNPTFLPRSEDEREMC RT+YCTNIDK++TQ D
Sbjct: 222 RAALSMSGTVLGFYPLKVLPSKTAIAPVNPTFLPRSEDEREMCVRTVYCTNIDKRITQID 281
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
+K FFE CGEV RLR LGDY H TRIAFVEFAM + C
Sbjct: 282 LKGFFEMPCGEVHRLR-LGDYHHQTRIAFVEFAMAESAIAALHC 324
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 44/95 (46%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RTVY ++ID+++T+ L F + CG+V R+ GD + R AFVEF E A A
Sbjct: 262 EMCVRTVYCTNIDKRITQIDLKGFFEMPCGEVHRLRL-GDYHHQTRIAFVEFAMAESAIA 320
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 268
AL +G +LG P+RV PSKT PV P F PR+E
Sbjct: 321 ALHCSGIVLGALPIRVSPSKT---PVRPHF-PRAE 351
>gi|1174153|gb|AAA86641.1| RNA-binding protein [Arabidopsis thaliana]
Length = 336
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 199/340 (58%), Positives = 230/340 (67%), Gaps = 39/340 (11%)
Query: 1 MAVAENAGAKIDSSNQNL----DDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTK 56
MAV E+ GA L + V+S + ++NDH GNG I + G
Sbjct: 1 MAVIESVGANTTVEAGGLISPSPPSSVTSQESGASSNNDHG----GNG---IHDEIG--- 50
Query: 57 PGAGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIF 116
V+V SD GESFK +MR+L ++LSKLNPMA EF+PPSL +
Sbjct: 51 ---------VHVARSDG------GESFKR-DMRELHELLSKLNPMAKEFIPPSLTKPVVN 94
Query: 117 NFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
FN FF N GF NF ++ DG+ RRK++ QGKRRMN RTS AQ++E
Sbjct: 95 GFNGGFFAVNNGFVAAGNFPVNEDGSF--------RRKKSFGQQGKRRMNPRTSLAQREE 146
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDI QQVTEEQLA LF+ GQVVDCRICGDPNSVLRFAF+EFTDE GAR AL
Sbjct: 147 IIRRTVYVSDIYQQVTEEQLAGLFIGFGQVVDCRICGDPNSVLRFAFIEFTDEVGARTAL 206
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L+GTMLGFYPV+V+PSKTAIAPVNPTFLPR+EDEREMC+RTIYCTNIDKK+TQ DIKLF
Sbjct: 207 NLSGTMLGFYPVKVMPSKTAIAPVNPTFLPRTEDEREMCARTIYCTNIDKKLTQTDIKLF 266
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
FESVCGEV RLRLLGDY H TRI FVEF M C
Sbjct: 267 FESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESAIGALNC 306
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 57/97 (58%), Gaps = 4/97 (4%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R FVEF E A
Sbjct: 241 EREMCARTIYCTNIDKKLTQTDIKLFFESVCGEVYRLRLLGDYHHPTRIGFVEFVMAESA 300
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 268
AL+ +G +LG P+RV PSKT PV +PR +
Sbjct: 301 IGALNCSGVLLGSLPIRVSPSKT---PVRSRAIPRHQ 334
>gi|255646437|gb|ACU23697.1| unknown [Glycine max]
Length = 291
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 180/259 (69%), Positives = 209/259 (80%), Gaps = 3/259 (1%)
Query: 77 RKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIM 136
R GESFK +MRDL ++LSKLNPMA EFVPPSL N + P GFGY NNFI+
Sbjct: 7 RMGGESFKR-DMRDLEELLSKLNPMAEEFVPPSLTNTHGYLPGPGAGAGAGFGYPNNFIL 65
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
+ + NG T RR++NGY+ GKRR+N + +++E+IRRTVYVSDIDQ VTEEQLA
Sbjct: 66 -LNNFGDANGQTN-RRRKNGYNHGKRRVNHKMDMEKREEMIRRTVYVSDIDQLVTEEQLA 123
Query: 197 TLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LFL CGQVVD R+CGDPNS+LRFAFVEFTDE+GARAAL+L+GTMLG+YP+RVLPSKTAI
Sbjct: 124 GLFLNCGQVVDYRVCGDPNSILRFAFVEFTDEDGARAALNLSGTMLGYYPLRVLPSKTAI 183
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
APVNPTFLPRSEDEREMCSRTIYCTNIDKK+TQ D+K FFES+CGEVQRLRLLGDY HST
Sbjct: 184 APVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHST 243
Query: 317 RIAFVEFAMVSEPFSWHAC 335
RIAFVEF + + +C
Sbjct: 244 RIAFVEFTVAESAIAALSC 262
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R AFVEFT E A
Sbjct: 197 EREMCSRTIYCTNIDKKLTQADVKHFFESICGEVQRLRLLGDYHHSTRIAFVEFTVAESA 256
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AALS +G +LG P+RV PSKT + P
Sbjct: 257 IAALSCSGVILGSLPIRVSPSKTPVRSRAP 286
>gi|297851722|ref|XP_002893742.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
gi|297339584|gb|EFH70001.1| hypothetical protein ARALYDRAFT_473465 [Arabidopsis lyrata subsp.
lyrata]
Length = 409
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 179/260 (68%), Positives = 204/260 (78%), Gaps = 6/260 (2%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLAN----GQIFNFNPAFFGPNGFGYTNNFI 135
GESFK +MR+L ++ SKLNPMA EFVPPSL G + N FF G + NN
Sbjct: 79 GESFKR-DMRELQELFSKLNPMAEEFVPPSLTKQGGNGGLNGVNGGFFTSAGSFFRNNGF 137
Query: 136 MHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
T N + RRK++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQL
Sbjct: 138 SGTGNGGYGNENGGFRRKKS-FGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQL 196
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A LF++CGQVVDCRICGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTA
Sbjct: 197 AGLFVSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTA 256
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
IAPVNPTFLPR+EDEREMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHS
Sbjct: 257 IAPVNPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHS 316
Query: 316 TRIAFVEFAMVSEPFSWHAC 335
TRIAFVEF M + C
Sbjct: 317 TRIAFVEFVMAESAIAALNC 336
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ + F + CG+V R+ GD R AFVEF E A
Sbjct: 271 EREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESA 330
Query: 232 RAALSLAGTMLGFYPVR 248
AAL+ +G +LG P+R
Sbjct: 331 IAALNCSGVVLGSLPIR 347
>gi|79319100|ref|NP_001031131.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|332193409|gb|AEE31530.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 406
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 178/256 (69%), Positives = 202/256 (78%), Gaps = 2/256 (0%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD 139
GESFK +MR+L ++ SKLNPMA EFVPPSL N FF G + NN T
Sbjct: 76 GESFKR-DMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTG 134
Query: 140 GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 199
N + RRK++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF
Sbjct: 135 NGGYGNENGGFRRKKS-FGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLF 193
Query: 200 LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
++CGQVVDCRICGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPV
Sbjct: 194 VSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPV 253
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
NPTFLPR+EDEREMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHSTRIA
Sbjct: 254 NPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIA 313
Query: 320 FVEFAMVSEPFSWHAC 335
FVEF M + C
Sbjct: 314 FVEFVMAESAIAALNC 329
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 47/77 (61%), Gaps = 1/77 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ + F + CG+V R+ GD R AFVEF E A
Sbjct: 264 EREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESA 323
Query: 232 RAALSLAGTMLGFYPVR 248
AAL+ +G +LG P+R
Sbjct: 324 IAALNCSGVVLGSLPIR 340
>gi|15223304|ref|NP_174556.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
gi|6714278|gb|AAF25974.1|AC017118_11 F6N18.17 [Arabidopsis thaliana]
gi|332193408|gb|AEE31529.1| CTC-interacting domain 11 protein [Arabidopsis thaliana]
Length = 358
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 178/256 (69%), Positives = 202/256 (78%), Gaps = 2/256 (0%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTD 139
GESFK +MR+L ++ SKLNPMA EFVPPSL N FF G + NN T
Sbjct: 76 GESFKR-DMRELQELFSKLNPMAEEFVPPSLNKQGGNGVNGGFFTSAGSFFRNNGFAGTG 134
Query: 140 GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 199
N + RRK++ + QGKRRMN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF
Sbjct: 135 NGGYGNENGGFRRKKS-FGQGKRRMNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLF 193
Query: 200 LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
++CGQVVDCRICGDPNSVLRFAF+EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPV
Sbjct: 194 VSCGQVVDCRICGDPNSVLRFAFIEFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPV 253
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
NPTFLPR+EDEREMC+RTIYCTNIDKKVTQ D+K+FFES CGEV RLRLLGDYQHSTRIA
Sbjct: 254 NPTFLPRTEDEREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIA 313
Query: 320 FVEFAMVSEPFSWHAC 335
FVEF M + C
Sbjct: 314 FVEFVMAESAIAALNC 329
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ + F + CG+V R+ GD R AFVEF E A
Sbjct: 264 EREMCARTIYCTNIDKKVTQSDVKIFFESFCGEVYRLRLLGDYQHSTRIAFVEFVMAESA 323
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P +P
Sbjct: 324 IAALNCSGVVLGSLPIRVSPSKTPVRPRSP 353
>gi|168046548|ref|XP_001775735.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162672887|gb|EDQ59418.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 256
Score = 346 bits (888), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 192/249 (77%), Gaps = 23/249 (9%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGH 147
MR+L D+L+KLNP+A EFVPPS A+ + T ++
Sbjct: 1 MRELEDLLTKLNPLAKEFVPPSHAD----------------------LASTTAPSSVASS 38
Query: 148 TTTRRKRNGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
RK+NG++Q KRR+N RTS AQ+++ IRRTVYVSDIDQQVTEEQLA LF+TCGQVV
Sbjct: 39 KGQPRKKNGFNQVNKRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVV 98
Query: 207 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
DCR+CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 99 DCRVCGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPR 158
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
SEDEREMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF M
Sbjct: 159 SEDEREMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMA 218
Query: 327 SEPFSWHAC 335
+ C
Sbjct: 219 ESAMAALNC 227
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 162 EREMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESA 221
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P +P
Sbjct: 222 MAALNCSGAILGSLPIRVSPSKTPVRPRSP 251
>gi|218200388|gb|EEC82815.1| hypothetical protein OsI_27601 [Oryza sativa Indica Group]
Length = 277
Score = 346 bits (887), Expect = 9e-93, Method: Compositional matrix adjust.
Identities = 170/239 (71%), Positives = 186/239 (77%), Gaps = 24/239 (10%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNG 146
EMRDL D+LSKLNPMA EFVPPSLA P + Y + T G
Sbjct: 24 EMRDLEDLLSKLNPMAEEFVPPSLAAA----------SPTAYAY---YPTPTPSHVFPAG 70
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
H GKRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVV
Sbjct: 71 HA-----------GKRRMNRRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVV 119
Query: 207 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
DCR+CGDPNSVLRFAF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPR
Sbjct: 120 DCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPR 179
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
S+DEREMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF M
Sbjct: 180 SDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVM 238
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 183 EREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESA 242
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 243 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 272
>gi|302769672|ref|XP_002968255.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
gi|300163899|gb|EFJ30509.1| hypothetical protein SELMODRAFT_66365 [Selaginella moellendorffii]
Length = 260
Score = 342 bits (877), Expect = 1e-91, Method: Compositional matrix adjust.
Identities = 167/248 (67%), Positives = 189/248 (76%), Gaps = 11/248 (4%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGH 147
MR+L D+L KLNP+A EFVPPS + PA + I H
Sbjct: 1 MRELEDLLKKLNPLAKEFVPPSRGD-------PAL----SKELLSKQINHQQQQLQQQQP 49
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
+RK+NGY+ GK+R N R S AQ++E IRRTVYVSDIDQQVTEEQLA LF+ CGQV+D
Sbjct: 50 LQQQRKQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQVID 109
Query: 208 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
CR+CGDPNSVLRFAFVEFTDEEGAR AL+LAGTMLGFYPVRVLPSKTAI PVNPTFLPRS
Sbjct: 110 CRVCGDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFLPRS 169
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVS 327
EDER+MC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEFA+
Sbjct: 170 EDERQMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAE 229
Query: 328 EPFSWHAC 335
+ C
Sbjct: 230 SAMAALNC 237
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF E A AAL+
Sbjct: 178 RTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAESAMAALNC 237
Query: 238 AGTMLGFYPVRVLPSKTAIAP 258
+G +LG P+RV PSKT + P
Sbjct: 238 SGAILGSLPIRVSPSKTPVRP 258
>gi|50725622|dbj|BAD33089.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
gi|182375457|dbj|BAG24017.1| RNA-binding protein [Oryza sativa Japonica Group]
gi|215736921|dbj|BAG95850.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222639804|gb|EEE67936.1| hypothetical protein OsJ_25822 [Oryza sativa Japonica Group]
Length = 302
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 170/250 (68%), Positives = 187/250 (74%), Gaps = 21/250 (8%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGY-----TNNFIMHTDGT 141
EMRDL D+LSKLNPMA EFVPPSLA P + Y ++ DG
Sbjct: 24 EMRDLEDLLSKLNPMAEEFVPPSLAAA----------SPTAYAYYPTPTPSHVFPAVDGL 73
Query: 142 ANTNGH------TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
A GKRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQL
Sbjct: 74 AGPRPRKKGGGGGGGGGFGGQGHAGKRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQL 133
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTA
Sbjct: 134 AALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTA 193
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
IAPVNPTFLPRS+DEREMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HS
Sbjct: 194 IAPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHS 253
Query: 316 TRIAFVEFAM 325
TRIAFVEF M
Sbjct: 254 TRIAFVEFVM 263
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 208 EREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESA 267
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 268 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 297
>gi|224028543|gb|ACN33347.1| unknown [Zea mays]
gi|413941691|gb|AFW74340.1| CID11 [Zea mays]
Length = 328
Score = 340 bits (872), Expect = 5e-91, Method: Compositional matrix adjust.
Identities = 170/257 (66%), Positives = 192/257 (74%), Gaps = 20/257 (7%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTN---NFIMHTDGTAN 143
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F + + G
Sbjct: 35 EMRDLEDLLSKLNPMAEEFVPPSLASPA--ALTPAPLSPAAYGFYPAGAGFAVASPGHGG 92
Query: 144 TNGHTTTRRKR--------------NGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQ 188
G +G+ +RR N RTS AQ+DE+IRRTVYVSDID
Sbjct: 93 VVGFPAVADAHAARGRKKGGAGGGFSGHGHPARRRTNSRTSMAQRDEIIRRTVYVSDIDH 152
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 153 QVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 212
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGEV RLRL
Sbjct: 213 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 272
Query: 309 LGDYQHSTRIAFVEFAM 325
LGDY HSTRIAFVEF M
Sbjct: 273 LGDYHHSTRIAFVEFVM 289
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 234 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 293
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 294 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 323
>gi|226529745|ref|NP_001150079.1| CID11 [Zea mays]
gi|195636508|gb|ACG37722.1| CID11 [Zea mays]
Length = 328
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/257 (66%), Positives = 190/257 (73%), Gaps = 20/257 (7%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTN---NFIMHTDGTAN 143
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F + + G
Sbjct: 35 EMRDLEDLLSKLNPMAEEFVPPSLASPA--ALTPAPLSPAAYGFYPAGAGFAVASPGHGG 92
Query: 144 TNGHTTT---------------RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQ 188
G G+RR N RTS AQ+DE+IRRTVYVSDID
Sbjct: 93 VVGFPAVADAHAARGRKKGGAGGGFSGHGHPGRRRTNSRTSMAQRDEIIRRTVYVSDIDH 152
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 153 QVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 212
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGEV RLRL
Sbjct: 213 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 272
Query: 309 LGDYQHSTRIAFVEFAM 325
LGDY HSTRIAFVEF M
Sbjct: 273 LGDYHHSTRIAFVEFVM 289
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 234 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 293
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 294 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 323
>gi|302788706|ref|XP_002976122.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
gi|300156398|gb|EFJ23027.1| hypothetical protein SELMODRAFT_56081 [Selaginella moellendorffii]
Length = 267
Score = 336 bits (862), Expect = 8e-90, Method: Compositional matrix adjust.
Identities = 167/251 (66%), Positives = 192/251 (76%), Gaps = 12/251 (4%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPS---LANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANT 144
MR+L D+L KLNP+A EFVPPS + ++ AFF F + G+
Sbjct: 1 MRELEDLLKKLNPLAKEFVPPSPTTQGDLEVLLETKAFFVLATFSFFA-------GSDRK 53
Query: 145 NGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
G ++NGY+ GK+R N R S AQ++E IRRTVYVSDIDQQVTEEQLA LF+ CGQ
Sbjct: 54 LGLFLV--QQNGYNTGKKRYNNRQSKAQREECIRRTVYVSDIDQQVTEEQLAALFINCGQ 111
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
V+DCR+CGDPNSVLRFAFVEFTDEEGAR AL+LAGTMLGFYPVRVLPSKTAI PVNPTFL
Sbjct: 112 VIDCRVCGDPNSVLRFAFVEFTDEEGARQALNLAGTMLGFYPVRVLPSKTAIVPVNPTFL 171
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
PRSEDER+MC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEFA
Sbjct: 172 PRSEDERQMCARTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFA 231
Query: 325 MVSEPFSWHAC 335
+ + C
Sbjct: 232 LAESAMAALNC 242
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF E A AAL+
Sbjct: 183 RTIYCTNIDKKVSQSDVKLFFESLCGEVSRLRLLGDYHHSTRIAFVEFALAESAMAALNC 242
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNP 261
+G +LG P+RV PSKT + P +P
Sbjct: 243 SGAILGSLPIRVSPSKTPVRPRSP 266
>gi|357139501|ref|XP_003571320.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 328
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/262 (65%), Positives = 194/262 (74%), Gaps = 25/262 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANG-----------QIFNFNPAFFGPNGFGYTNNFI 135
EMRDL ++LSKLNPMA EFVPPSLA + NP+ G G G+ +
Sbjct: 30 EMRDLEELLSKLNPMAEEFVPPSLATAPHPTAAGYAAAAGYYPNPSAGGGRG-GFVASPA 88
Query: 136 MHTDGTANTNGHTTTRRKRNGYSQ------------GKRRMNCRTSNAQQDEVIRRTVYV 183
H G R R + GKRR+N RTS AQ+DEVIRRTVYV
Sbjct: 89 AHR-GVVGFPAAPADGRGRKKFGGYAGAGPGGYPQGGKRRVNSRTSQAQRDEVIRRTVYV 147
Query: 184 SDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG 243
SDID QVTEEQLA LF+ GQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG
Sbjct: 148 SDIDHQVTEEQLAALFINVGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALTLSGTVLG 207
Query: 244 FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNID+KV+Q D+KLFFES+CGEV
Sbjct: 208 YYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDRKVSQADVKLFFESICGEV 267
Query: 304 QRLRLLGDYQHSTRIAFVEFAM 325
RLRLLGDYQH+TRIAFVEF M
Sbjct: 268 YRLRLLGDYQHNTRIAFVEFVM 289
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ + F + CG+V R+ GD R AFVEF E A
Sbjct: 234 EREMCARTIYCTNIDRKVSQADVKLFFESICGEVYRLRLLGDYQHNTRIAFVEFVMAESA 293
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AAL+ +G +LG P+RV PSKT + P P L
Sbjct: 294 TAALNCSGVILGSLPIRVSPSKTPVRPRAPRPL 326
>gi|255578158|ref|XP_002529948.1| RNA-binding protein, putative [Ricinus communis]
gi|223530546|gb|EEF32425.1| RNA-binding protein, putative [Ricinus communis]
Length = 281
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 163/251 (64%), Positives = 192/251 (76%), Gaps = 11/251 (4%)
Query: 77 RKMGESFKDCE--MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNF 134
+KM K+ E ++ LVDM +KLNP+A EF P S N I + F NNF
Sbjct: 18 KKMDSDVKNSEFSVQKLVDMFTKLNPLAKEFFPSSYNNNNI---------THNFLNLNNF 68
Query: 135 IMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQ 194
+ D + + ++ RRKRN Y+QGKRR+N R AQ+D+ IRRTVYVSDIDQ VTEE+
Sbjct: 69 AVVVDKQSPIDNFSSNRRKRNNYNQGKRRLNGRAYRAQRDDSIRRTVYVSDIDQHVTEER 128
Query: 195 LATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKT 254
LA LF +CGQVVDCR+CGDP+SVLRFAFVEF DE GARAAL+L GT+LG+YP RVLPSKT
Sbjct: 129 LAGLFSSCGQVVDCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTVLGYYPFRVLPSKT 188
Query: 255 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH 314
AI PVNPTFLPRSEDEREMCSRT+YCTNIDKK++Q ++K FFES CGEV RLRLLGD+ H
Sbjct: 189 AILPVNPTFLPRSEDEREMCSRTVYCTNIDKKISQAEVKTFFESTCGEVTRLRLLGDHVH 248
Query: 315 STRIAFVEFAM 325
STRIAFVEFAM
Sbjct: 249 STRIAFVEFAM 259
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 1/77 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++ID+++++ ++ T F TCG+V R+ GD R AFVEF E A
Sbjct: 204 EREMCSRTVYCTNIDKKISQAEVKTFFESTCGEVTRLRLLGDHVHSTRIAFVEFAMAESA 263
Query: 232 RAALSLAGTMLGFYPVR 248
AL+ +G ++G P+R
Sbjct: 264 IIALNCSGMVVGTQPIR 280
>gi|326514404|dbj|BAJ96189.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 324
Score = 332 bits (851), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/249 (67%), Positives = 187/249 (75%), Gaps = 10/249 (4%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLA---------NGQIFNFNPAF-FGPNGFGYTNNFIM 136
EMRDL ++LSKLNPMA EFVPPSLA G N PA F P +
Sbjct: 37 EMRDLEELLSKLNPMAEEFVPPSLAAHPMPPPPYAGYYPNGPPAAGFAPVASPGHRGVVG 96
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
GKRR+N RTS AQ+DEVIRRTVYVSDID QVTEEQLA
Sbjct: 97 FPAADGRGRKKFGGGYGGGYPHGGKRRVNSRTSQAQRDEVIRRTVYVSDIDHQVTEEQLA 156
Query: 197 TLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LF+ GQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVRVLPSKTAI
Sbjct: 157 ALFINVGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALTLSGTVLGYYPVRVLPSKTAI 216
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
APVNPTFLPRS+DEREMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDYQH+T
Sbjct: 217 APVNPTFLPRSDDEREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYQHNT 276
Query: 317 RIAFVEFAM 325
RIAFVEF M
Sbjct: 277 RIAFVEFVM 285
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ + F + CG+V R+ GD R AFVEF E A
Sbjct: 230 EREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYQHNTRIAFVEFVMAESA 289
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV P KT + P P
Sbjct: 290 TAALNCSGVILGSLPIRVSPFKTPVRPRAP 319
>gi|116781618|gb|ABK22180.1| unknown [Picea sitchensis]
Length = 288
Score = 329 bits (844), Expect = 9e-88, Method: Compositional matrix adjust.
Identities = 158/239 (66%), Positives = 190/239 (79%), Gaps = 23/239 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNG 146
+MR+LVD+LSKLNP+A EF+P + +FI++ +G+ N
Sbjct: 34 DMRELVDLLSKLNPLAEEFIPQP-------------------HRSPSFIINGNGSFANN- 73
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
+RRK+N ++QGKRR+N R AQQ++ +RRTVYV DID QVTEEQLA LF+ CGQV+
Sbjct: 74 ---SRRKKNNFNQGKRRLNGRNIRAQQEDSVRRTVYVCDIDHQVTEEQLAALFINCGQVI 130
Query: 207 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
DCRICGDPNSVLRFAF+EF DE+GARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 131 DCRICGDPNSVLRFAFIEFADEQGARAALSLAGTMLGYYPVRVLPSKTAILPVNPTFLPR 190
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
SEDEREMC+RTIYCTNIDKKV+Q ++++FFES+CGEV RLRLLGD+ HSTRIAFVEF M
Sbjct: 191 SEDEREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVM 249
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ ++ F + CG+V R+ GD R AFVEF E A
Sbjct: 194 EREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAESA 253
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G ++G P+RV PSKT + P P
Sbjct: 254 ILALNCSGAIVGSLPIRVSPSKTPVRPRIP 283
>gi|242080315|ref|XP_002444926.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
gi|241941276|gb|EES14421.1| hypothetical protein SORBIDRAFT_07g001560 [Sorghum bicolor]
Length = 348
Score = 328 bits (841), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 170/270 (62%), Positives = 187/270 (69%), Gaps = 31/270 (11%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIF---------NFNPAFFGPNGFGY--TNNFI 135
EMRDL D+LSKLNPMA EFVPPSL + PA P +G+ N
Sbjct: 40 EMRDLEDLLSKLNPMAEEFVPPSLTSPVAVAVGAGPGPGPLTPAPLSPAAYGFYPAANAG 99
Query: 136 MHTDGTANTNG--------------------HTTTRRKRNGYSQGKRRMNCRTSNAQQDE 175
A G G+RR N RTS AQ+DE
Sbjct: 100 FAVASPAAHRGVVGFPAAVADAAHAGRGRKKGGAGGGFGGHGHPGRRRTNSRTSMAQRDE 159
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
VIRRTVYVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL
Sbjct: 160 VIRRTVYVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAAL 219
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLF
Sbjct: 220 NLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLF 279
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
FES+CGEV RLRLLGDY HSTRIAFVEF M
Sbjct: 280 FESICGEVFRLRLLGDYHHSTRIAFVEFVM 309
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 254 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 313
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 314 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 343
>gi|308081540|ref|NP_001182915.1| uncharacterized protein LOC100501201 [Zea mays]
gi|238008164|gb|ACR35117.1| unknown [Zea mays]
gi|413921443|gb|AFW61375.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 342
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/264 (63%), Positives = 190/264 (71%), Gaps = 25/264 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLAN------GQIFNFNPAFFGPNGFGY---TNNFIMH 137
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F +
Sbjct: 39 EMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFAVA 98
Query: 138 TDG-------TANTNGHTTTRRKRNGYSQGKRRM---------NCRTSNAQQDEVIRRTV 181
+ G A + H K++G N RTS AQ+DE IRRTV
Sbjct: 99 SPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRRTV 158
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+
Sbjct: 159 YVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTV 218
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CG
Sbjct: 219 LGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICG 278
Query: 302 EVQRLRLLGDYQHSTRIAFVEFAM 325
EV RLRLLGDY HSTRIAFVEF M
Sbjct: 279 EVFRLRLLGDYHHSTRIAFVEFVM 302
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 247 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 306
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AAL+ +G +LG P+RV PSKT + P P L
Sbjct: 307 TAALNCSGVVLGSLPIRVSPSKTPVRPRVPRHL 339
>gi|413921444|gb|AFW61376.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 482
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 168/264 (63%), Positives = 190/264 (71%), Gaps = 25/264 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLAN------GQIFNFNPAFFGPNGFGY---TNNFIMH 137
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F +
Sbjct: 39 EMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFAVA 98
Query: 138 TDG-------TANTNGHTTTRRKRNGYSQGKRRM---------NCRTSNAQQDEVIRRTV 181
+ G A + H K++G N RTS AQ+DE IRRTV
Sbjct: 99 SPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRRTV 158
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+
Sbjct: 159 YVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTV 218
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CG
Sbjct: 219 LGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICG 278
Query: 302 EVQRLRLLGDYQHSTRIAFVEFAM 325
EV RLRLLGDY HSTRIAFVEF M
Sbjct: 279 EVFRLRLLGDYHHSTRIAFVEFVM 302
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 49/79 (62%), Gaps = 1/79 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 247 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 306
Query: 232 RAALSLAGTMLGFYPVRVL 250
AAL+ +G +LG P+ ++
Sbjct: 307 TAALNCSGVVLGSLPISLM 325
>gi|224056565|ref|XP_002298913.1| predicted protein [Populus trichocarpa]
gi|222846171|gb|EEE83718.1| predicted protein [Populus trichocarpa]
Length = 307
Score = 323 bits (827), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 186/238 (78%), Gaps = 14/238 (5%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGH 147
++ LVDM +KLNP+A EF P S + PN + NNF + +AN N
Sbjct: 45 VQKLVDMFTKLNPLAKEFFPSSYSKN----------NPNELHF-NNFAVPVKQSANDN-- 91
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
+RKRN ++QG+R++N R AQQ++ IRRTVYVSDIDQ VTEE+LA LF CGQVVD
Sbjct: 92 -FPKRKRNNFNQGRRKLNGRAYRAQQEDSIRRTVYVSDIDQHVTEERLAGLFSGCGQVVD 150
Query: 208 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
CR+CGDP+SVLRFAFVEF DE+GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPRS
Sbjct: 151 CRVCGDPHSVLRFAFVEFADEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRS 210
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
EDEREMC+RT+YCTNIDKKV+Q ++K FFES+CGEV RLRLLGD HSTRIAFVEFAM
Sbjct: 211 EDEREMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAM 268
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++ID++V++ ++ F + CG+V R+ GD R AFVEF E A
Sbjct: 213 EREMCTRTVYCTNIDKKVSQVEVKNFFESICGEVTRLRLLGDQVHSTRIAFVEFAMAESA 272
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G LG PVRV PSKT + P
Sbjct: 273 IVALNCSGMALGSQPVRVSPSKTPVRP 299
>gi|168022364|ref|XP_001763710.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685203|gb|EDQ71600.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 213
Score = 322 bits (824), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 151/184 (82%), Positives = 165/184 (89%), Gaps = 1/184 (0%)
Query: 153 KRNGYSQGK-RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 211
K+NGY+QG RR+N RTS AQ+++ IRRTVYVSDIDQQVTEEQLA LF+TCGQVVDCR+C
Sbjct: 1 KKNGYNQGNNRRVNSRTSRAQREDSIRRTVYVSDIDQQVTEEQLAALFITCGQVVDCRVC 60
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
GDPNSVLRFAFVEFTDEEGARAALSLAGTMLG+YPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 61 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGYYPVRVLPSKTAIVPVNPTFLPRSEDER 120
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFS 331
EMC+RTIYCTNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF M +
Sbjct: 121 EMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESAMA 180
Query: 332 WHAC 335
C
Sbjct: 181 ALNC 184
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 119 EREMCARTIYCTNIDKKVSQADVKLFFESLCGEVARLRLLGDYHHSTRIAFVEFVMAESA 178
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P +P
Sbjct: 179 MAALNCSGAILGSLPIRVSPSKTPVRPRSP 208
>gi|358248658|ref|NP_001240174.1| uncharacterized protein LOC100779109 [Glycine max]
gi|255639113|gb|ACU19856.1| unknown [Glycine max]
Length = 296
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 160/263 (60%), Positives = 198/263 (75%), Gaps = 7/263 (2%)
Query: 63 GGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAF 122
+ A N M+ K ++ + ++ LVDM +KLNP+A EF P S + N + F
Sbjct: 2 AAVAEIPADANKMDSK-PKAESEFSVQKLVDMFTKLNPLAKEFFPSSYSP----NHDHGF 56
Query: 123 FGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVY 182
G N T F++ T +AN N +RR+RN ++QG+RR++ R+ AQ+++ IRRTVY
Sbjct: 57 QGFNQLSPTQ-FLVSTKPSANEN-FLNSRRRRNSFNQGRRRVSGRSLKAQREDSIRRTVY 114
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTML 242
VS+IDQ VTEE+LA LF +CGQV+DCRICGDP+SVLRFAFVEF DE GAR AL+L GT+L
Sbjct: 115 VSEIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVL 174
Query: 243 GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 302
G+YPVRVLPSKTAI PVNPTFLPRS+DEREMC+RTIYCTNIDKKV+Q ++K FFES CGE
Sbjct: 175 GYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTIYCTNIDKKVSQAEVKNFFESACGE 234
Query: 303 VQRLRLLGDYQHSTRIAFVEFAM 325
V RLRLLGD HSTRIAFVEFAM
Sbjct: 235 VMRLRLLGDQVHSTRIAFVEFAM 257
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ ++ F + CG+V+ R+ GD R AFVEF E A
Sbjct: 202 EREMCARTIYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDQVHSTRIAFVEFAMAESA 261
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG P+RV PSKT + P P
Sbjct: 262 IIALNCSGMLLGTQPIRVSPSKTPVRPRVP 291
>gi|224114547|ref|XP_002316790.1| predicted protein [Populus trichocarpa]
gi|222859855|gb|EEE97402.1| predicted protein [Populus trichocarpa]
Length = 308
Score = 317 bits (811), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 158/238 (66%), Positives = 187/238 (78%), Gaps = 14/238 (5%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGH 147
++ LVDM +KLNP+A EF P S +N N P F + NNF + +AN N
Sbjct: 46 VQKLVDMFTKLNPLAKEFFPSS------YNKN----NPKQF-HINNFPVPNKQSANDN-- 92
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
+R+RN ++QG+RR+N R AQ+++ IRRTVYVSDIDQ VTEEQLA LF CGQVVD
Sbjct: 93 -FPKRRRNDFNQGRRRLNGRAYRAQREDSIRRTVYVSDIDQHVTEEQLAGLFSGCGQVVD 151
Query: 208 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
CRICGDP SVLRFAFVEF E+GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLP+S
Sbjct: 152 CRICGDPRSVLRFAFVEFAVEQGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPQS 211
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
EDEREMC+RT+YCTNI+KKV+Q ++K FFES+CGEV RLRLLGD+ HSTRIAFVEFAM
Sbjct: 212 EDEREMCTRTVYCTNIEKKVSQAEVKNFFESICGEVTRLRLLGDHVHSTRIAFVEFAM 269
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++I+++V++ ++ F + CG+V R+ GD R AFVEF E A
Sbjct: 214 EREMCTRTVYCTNIEKKVSQAEVKNFFESICGEVTRLRLLGDHVHSTRIAFVEFAMAESA 273
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 274 IVALNCSGMVLGSQPVRVSPSKTPVRP 300
>gi|15231858|ref|NP_188063.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
gi|11994215|dbj|BAB01337.1| unnamed protein product [Arabidopsis thaliana]
gi|332642006|gb|AEE75527.1| CTC-interacting domain 9 protein [Arabidopsis thaliana]
Length = 327
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/257 (62%), Positives = 179/257 (69%), Gaps = 16/257 (6%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL---ANGQIFNFNPAFFGPNGFGYTNN-----FIMHT 138
+M LV M KLNP+A EF P N Q+ N F + F T F +
Sbjct: 49 DMHKLVAMFKKLNPLAKEFFPSYYDPKKNNQVAKAN-QFLPADDFETTKKQSGEEFDLDA 107
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
NT RKR YSQG+RR+ R S AQ+++ IRRTVYVSDIDQ VTEE LA L
Sbjct: 108 KKDDNT-------RKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGL 160
Query: 199 FLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAP 258
F CGQVVDCRICGDP+SVLRFAFVEF D++GA ALSL GTMLGFYPVRVLPSKTAI P
Sbjct: 161 FSNCGQVVDCRICGDPHSVLRFAFVEFADDQGAHEALSLGGTMLGFYPVRVLPSKTAILP 220
Query: 259 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 318
VNPTFLPRSEDEREMC+RTIYCTNIDKKV+Q D++ FFES CGEV RLRLLGD HSTRI
Sbjct: 221 VNPTFLPRSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRI 280
Query: 319 AFVEFAMVSEPFSWHAC 335
AFVEFA+ S C
Sbjct: 281 AFVEFALADSALSALNC 297
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RT+Y ++ID++V++ + F + CG+V R+ GD R AFVEF + A +
Sbjct: 234 EMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFALADSALS 293
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G ++G P+RV PSKT + P
Sbjct: 294 ALNCSGMVVGSQPIRVSPSKTPVRP 318
>gi|115474513|ref|NP_001060853.1| Os08g0116400 [Oryza sativa Japonica Group]
gi|113622822|dbj|BAF22767.1| Os08g0116400, partial [Oryza sativa Japonica Group]
Length = 283
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/165 (86%), Positives = 155/165 (93%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRRMN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVVDCR+CGDPNSVLRF
Sbjct: 80 KRRMNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRF 139
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
AF+EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYC
Sbjct: 140 AFIEFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYC 199
Query: 281 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
TNIDKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF M
Sbjct: 200 TNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVM 244
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 189 EREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESA 248
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 249 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 278
>gi|356556922|ref|XP_003546769.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 296
Score = 304 bits (778), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 157/263 (59%), Positives = 199/263 (75%), Gaps = 7/263 (2%)
Query: 63 GGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAF 122
+ A N M+ K ++ + ++ LVDM +KLNP+A EF P S + N + F
Sbjct: 2 AAVAEIPADANKMDSK-PKAESEFSVQKLVDMFTKLNPLAKEFFPSSYSP----NHDNRF 56
Query: 123 FGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVY 182
G N T+ F++ T +A+ N RR+RN ++QG+R+++ R+ AQ+++ IRRTVY
Sbjct: 57 QGFNQLSPTH-FLVSTKPSADEN-FPNNRRRRNSFNQGRRKVSGRSLKAQREDSIRRTVY 114
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTML 242
VS+IDQ VTEE+LA LF +CGQV+DCRICGDP+SVLRFAFVEF DE GAR AL+L GT+L
Sbjct: 115 VSEIDQHVTEERLAALFSSCGQVIDCRICGDPHSVLRFAFVEFADEYGARTALNLGGTVL 174
Query: 243 GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 302
G+YPVRVLPSKTAI PVNPTFLPRS+DEREMC+RT+YCTNIDKKV+Q ++K FFES CGE
Sbjct: 175 GYYPVRVLPSKTAILPVNPTFLPRSDDEREMCARTVYCTNIDKKVSQAEVKNFFESACGE 234
Query: 303 VQRLRLLGDYQHSTRIAFVEFAM 325
V RLRLLGD+ HSTRIAFVEFAM
Sbjct: 235 VMRLRLLGDHVHSTRIAFVEFAM 257
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 55/87 (63%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++ID++V++ ++ F + CG+V+ R+ GD R AFVEF E A
Sbjct: 202 EREMCARTVYCTNIDKKVSQAEVKNFFESACGEVMRLRLLGDHVHSTRIAFVEFAMAESA 261
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG P+RV PSKT + P
Sbjct: 262 IIALNCSGMLLGTQPIRVSPSKTPVRP 288
>gi|50725623|dbj|BAD33090.1| putative RNA-binding protein RBP37 [Oryza sativa Japonica Group]
Length = 201
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 139/162 (85%), Positives = 152/162 (93%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
MN RTS AQ+DEVIRRTVYVSDID QVTEEQLA LF+ CGQVVDCR+CGDPNSVLRFAF+
Sbjct: 1 MNSRTSMAQRDEVIRRTVYVSDIDHQVTEEQLAALFINCGQVVDCRMCGDPNSVLRFAFI 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EFTDEE ARAAL+L+GT+LG+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNI
Sbjct: 61 EFTDEESARAALNLSGTVLGYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
DKKV+Q D+KLFFES+CGEV RLRLLGDY HSTRIAFVEF M
Sbjct: 121 DKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVM 162
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ + F + CG+V R+ GD + R AFVEF E A
Sbjct: 107 EREMCARTIYCTNIDKKVSQADVKLFFESICGEVYRLRLLGDYHHSTRIAFVEFVMAESA 166
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 167 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 196
>gi|79319864|ref|NP_001031182.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|332194856|gb|AEE32977.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 308
Score = 302 bits (773), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 150/250 (60%), Positives = 179/250 (71%), Gaps = 21/250 (8%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNG 146
+M+ LV M KLNP A EF P N +++F++ + N
Sbjct: 49 QMKKLVAMFKKLNPEAKEFFPSYKRNTN---------------QSDDFVIAIKPSGEDN- 92
Query: 147 HTTTRRKRNGYSQGKR-RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV 205
+++RN Y+QG+R R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQV
Sbjct: 93 ----KKRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQV 148
Query: 206 VDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
VDCRICGDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLP
Sbjct: 149 VDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLP 208
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
RSEDEREMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAM
Sbjct: 209 RSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAM 268
Query: 326 VSEPFSWHAC 335
+ C
Sbjct: 269 AESAVAALNC 278
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RT+Y +++D+ TE+ + T F + CG+V R+ GD R AFVEF E A A
Sbjct: 215 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 274
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL+ +G +LG P+RV PSKT +
Sbjct: 275 ALNCSGIVLGSQPIRVSPSKTPV 297
>gi|51969708|dbj|BAD43546.1| putative RNA-binding protein [Arabidopsis thaliana]
gi|51970080|dbj|BAD43732.1| putative RNA-binding protein [Arabidopsis thaliana]
Length = 295
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 150/250 (60%), Positives = 179/250 (71%), Gaps = 21/250 (8%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNG 146
+M+ LV M KLNP A EF P N +++F++ + N
Sbjct: 36 QMKKLVAMFKKLNPEAKEFFPSYKRNTN---------------QSDDFVIAIKPSGEDN- 79
Query: 147 HTTTRRKRNGYSQGKR-RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV 205
+++RN Y+QG+R R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQV
Sbjct: 80 ----KKRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQV 135
Query: 206 VDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
VDCRICGDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLP
Sbjct: 136 VDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLP 195
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
RSEDEREMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAM
Sbjct: 196 RSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAM 255
Query: 326 VSEPFSWHAC 335
+ C
Sbjct: 256 AESAVAALNC 265
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RT+Y +++D+ TE+ + T F + CG+V R+ GD R AFVEF E A A
Sbjct: 202 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 261
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL+ +G +LG P+RV PSKT +
Sbjct: 262 ALNCSGIVLGSQPIRVSPSKTPV 284
>gi|147803358|emb|CAN68836.1| hypothetical protein VITISV_026310 [Vitis vinifera]
Length = 195
Score = 301 bits (771), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 140/165 (84%), Positives = 150/165 (90%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
AQ++EVI+RTVYVSDIDQQVTEE LA LF+ CGQVVDCRICGDPNSVLRFAFVEFTDEEG
Sbjct: 2 AQREEVIKRTVYVSDIDQQVTEEDLAALFINCGQVVDCRICGDPNSVLRFAFVEFTDEEG 61
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
ARAALSLAGTMLG+YPVRVLPSKTAIAPVNPTFLPRSEDEREMC+RTIYCTNIDKKVTQ
Sbjct: 62 ARAALSLAGTMLGYYPVRVLPSKTAIAPVNPTFLPRSEDEREMCARTIYCTNIDKKVTQA 121
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
++KLFFES+CGEV RLRLLGDY HSTRIAFVEF M + C
Sbjct: 122 EVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESAIAALNC 166
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 57/90 (63%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ ++ F + CG+V R+ GD + R AFVEF E A
Sbjct: 101 EREMCARTIYCTNIDKKVTQAEVKLFFESICGEVHRLRLLGDYHHSTRIAFVEFVMAESA 160
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 161 IAALNCSGAILGSLPIRVSPSKTPVRPRAP 190
>gi|14030687|gb|AAK53018.1|AF375434_1 At1g32790 [Arabidopsis thaliana]
gi|25090128|gb|AAN72236.1| At1g32790/F6N18_9 [Arabidopsis thaliana]
Length = 201
Score = 296 bits (759), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 138/172 (80%), Positives = 153/172 (88%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
MN RTS AQ+++VIRRTVYVSD+DQQVTEEQLA LF++CGQVVDCRICGDPNSVLRFAF+
Sbjct: 1 MNARTSMAQREDVIRRTVYVSDLDQQVTEEQLAGLFVSCGQVVDCRICGDPNSVLRFAFI 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EFTDEEGA AL+L+GTMLGFYPV+VLPSKTAIAPVNPTFLPR+EDE EMC+RTIYCTNI
Sbjct: 61 EFTDEEGAMTALNLSGTMLGFYPVKVLPSKTAIAPVNPTFLPRTEDESEMCARTIYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
DKKVTQ D+K+FFE CGEV RLRLLGDYQHSTRIAFVEF M + C
Sbjct: 121 DKKVTQSDVKIFFEYFCGEVYRLRLLGDYQHSTRIAFVEFVMAESAIAALNC 172
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ + F CG+V R+ GD R AFVEF E A
Sbjct: 107 ESEMCARTIYCTNIDKKVTQSDVKIFFEYFCGEVYRLRLLGDYQHSTRIAFVEFVMAESA 166
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P +P
Sbjct: 167 IAALNCSGVVLGSLPIRVSPSKTPVRPRSP 196
>gi|115435208|ref|NP_001042362.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|56201519|dbj|BAD73038.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|56201749|dbj|BAD73106.1| RNA-binding protein -like [Oryza sativa Japonica Group]
gi|113531893|dbj|BAF04276.1| Os01g0209400 [Oryza sativa Japonica Group]
gi|215737283|dbj|BAG96212.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 308
Score = 295 bits (754), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 156/248 (62%), Positives = 182/248 (73%), Gaps = 24/248 (9%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSL-----------ANGQIFNFNPAFFGPNGFGYTNNFIM 136
++ LVD+LSKLNP A EFVP S A+ +F++N + G NG G +
Sbjct: 32 VQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYN-SIGGWNGGGKESGADA 90
Query: 137 HTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
+ RR+RNGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+L
Sbjct: 91 YQQ-----------RRRRNGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERL 139
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A +F CGQVVDCRICGDP+SVLRFAF+EF DEEGAR AL+L GTMLGFYPVRVLPSKTA
Sbjct: 140 ADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLPSKTA 199
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I PVNP FLPR+EDE+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HS
Sbjct: 200 ILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHS 259
Query: 316 TRIAFVEF 323
TRIAFVEF
Sbjct: 260 TRIAFVEF 267
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VT+ + F CG+V R+ GD R AFVEF E A
Sbjct: 214 EKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECA 273
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 274 IMALNCSGMILGTLPVRVSPSKTPVKP 300
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
R D + RT+Y ++ID VT+ + F + CG+V R+ GD R AF+EFA
Sbjct: 113 RHADREDSIRRTVYVSDIDHTVTEERLADIFAN-CGQVVDCRICGDPHSVLRFAFIEFA 170
>gi|218187722|gb|EEC70149.1| hypothetical protein OsI_00850 [Oryza sativa Indica Group]
Length = 317
Score = 294 bits (753), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 157/248 (63%), Positives = 183/248 (73%), Gaps = 15/248 (6%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSL-----------ANGQIFNFNPAFFGPNGFGYTNNFIM 136
++ LVD+LSKLNP A EFVP S A+ +F++N + G NG G +
Sbjct: 32 VQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYN-SIGGWNGGGKESGADA 90
Query: 137 HTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
+ T+ RR NGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+L
Sbjct: 91 YQQRRDLTDDDQLLRR--NGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERL 148
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A +F CGQVVDCRICGDP+SVLRFAF+EF DEEGARAAL+L GTMLGFYPVRVLPSKTA
Sbjct: 149 ADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARAALNLGGTMLGFYPVRVLPSKTA 208
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I PVNP FLPR+EDE+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HS
Sbjct: 209 ILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHS 268
Query: 316 TRIAFVEF 323
TRIAFVEF
Sbjct: 269 TRIAFVEF 276
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VT+ + F CG+V R+ GD R AFVEF E A
Sbjct: 223 EKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECA 282
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 283 IMALNCSGMILGTLPVRVSPSKTPVKP 309
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 32/59 (54%), Gaps = 1/59 (1%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
R D + RT+Y ++ID VT+ + F + CG+V R+ GD R AF+EFA
Sbjct: 122 RHADREDSIRRTVYVSDIDHTVTEERLADIFAN-CGQVVDCRICGDPHSVLRFAFIEFA 179
>gi|147818437|emb|CAN60729.1| hypothetical protein VITISV_013180 [Vitis vinifera]
Length = 642
Score = 294 bits (752), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 134/173 (77%), Positives = 154/173 (89%)
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
+RN Y+QG+RR++ R AQ+++ IRRTVYVSDIDQ VTEE+LA LF +CGQVVDCR+CG
Sbjct: 324 RRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVVDCRVCG 383
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
DP+SVLRFAFVEF DE GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPRSEDERE
Sbjct: 384 DPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPRSEDERE 443
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
MC+RT+YCTNIDKKV+Q ++K FFE CGEV RLRLLGD+ HSTRIAFVEFAM
Sbjct: 444 MCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAM 496
>gi|222617961|gb|EEE54093.1| hypothetical protein OsJ_00835 [Oryza sativa Japonica Group]
Length = 317
Score = 292 bits (748), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 156/249 (62%), Positives = 182/249 (73%), Gaps = 15/249 (6%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSL-----------ANGQIFNFNPAFFGPNGFGYTNNFIM 136
++ LVD+LSKLNP A EFVP S A+ +F++N + G NG G +
Sbjct: 32 VQKLVDLLSKLNPAAKEFVPSSAAVSSPSRKALSADAPVFDYN-SIGGWNGGGKESGADA 90
Query: 137 HTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQL 195
+ T+ RR NGY SQG+RRMN R +A +++ IRRTVYVSDID VTEE+L
Sbjct: 91 YQQRRDLTDDDQLLRR--NGYLSQGRRRMNERARHADREDSIRRTVYVSDIDHTVTEERL 148
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A +F CGQVVDCRICGDP+SVLRFAF+EF DEEGAR AL+L GTMLGFYPVRVLPSKTA
Sbjct: 149 ADIFANCGQVVDCRICGDPHSVLRFAFIEFADEEGARTALNLGGTMLGFYPVRVLPSKTA 208
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I PVNP FLPR+EDE+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLRLLGD HS
Sbjct: 209 ILPVNPKFLPRTEDEKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHS 268
Query: 316 TRIAFVEFA 324
TRIAFVEF
Sbjct: 269 TRIAFVEFV 277
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VT+ + F CG+V R+ GD R AFVEF E A
Sbjct: 223 EKEMVIRTVYCTNIDKKVTQLDVKNFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAECA 282
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 283 IMALNCSGMILGTLPVRVSPSKTPVKP 309
>gi|388509636|gb|AFK42884.1| unknown [Lotus japonicus]
Length = 313
Score = 289 bits (740), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 154/255 (60%), Positives = 186/255 (72%), Gaps = 13/255 (5%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLANG-------QIFNFNPAFFGPNGFGYTNNFIMHTDG 140
M+ LVD+ +KLNP+A EF+P S A Q FN + PN F NN +
Sbjct: 35 MQKLVDIFTKLNPLAEEFIPSSYAAAAHRDHLHQGFNQ----WSPNPFLVNNN--NNKPL 88
Query: 141 TANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFL 200
+ + RR+RN ++QG RR R AQ+++ +RRTVYVSDIDQ VTEE+LA LF
Sbjct: 89 ADDQYPNANNRRRRNNFNQGGRRFTGRVLKAQREDSVRRTVYVSDIDQHVTEERLAALFT 148
Query: 201 TCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
TCG V+DCRICGDP+SVLRFAFVEF DE GARAAL+L+GT+LG+YPVRVLPSKTAI PVN
Sbjct: 149 TCGSVIDCRICGDPHSVLRFAFVEFADEYGARAALNLSGTVLGYYPVRVLPSKTAILPVN 208
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF 320
PTFLPRS+DEREMCSRT+YCTNIDKKV+Q ++K FFE CGEV R+RLLGD+ HSTRIAF
Sbjct: 209 PTFLPRSDDEREMCSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAF 268
Query: 321 VEFAMVSEPFSWHAC 335
VEFA+ +C
Sbjct: 269 VEFAIAESAIIALSC 283
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++ID++V++ ++ F ++CG+V R+ GD R AFVEF E A
Sbjct: 218 EREMCSRTVYCTNIDKKVSQAEVKNFFEISCGEVTRIRLLGDHVHSTRIAFVEFAIAESA 277
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
ALS +G +LG PVRV PSKT + P P
Sbjct: 278 IIALSCSGMLLGTQPVRVSPSKTPVRPRVP 307
>gi|225462109|ref|XP_002277842.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and nuclear
[Vitis vinifera]
gi|296088694|emb|CBI38144.3| unnamed protein product [Vitis vinifera]
Length = 292
Score = 288 bits (738), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/239 (64%), Positives = 185/239 (77%), Gaps = 24/239 (10%)
Query: 91 LVDMLS--KLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANT--NG 146
+VDMLS KLNP+A EF P S Y+++ ++ TD + ++ +
Sbjct: 35 IVDMLSNLKLNPLAKEFFPSS--------------------YSHDHLIPTDFSKDSPNDA 74
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
+ RR+RN Y+QG+RR++ R AQ+++ IRRTVYVSDIDQ VTEE+LA LF +CGQVV
Sbjct: 75 YPNNRRRRNNYNQGRRRLSGRAFRAQREDSIRRTVYVSDIDQHVTEERLAALFSSCGQVV 134
Query: 207 DCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
DCR+CGDP+SVLRFAFVEF DE GARAAL+L GTMLG+YPVRVLPSKTAI PVNPTFLPR
Sbjct: 135 DCRVCGDPHSVLRFAFVEFADEHGARAALNLGGTMLGYYPVRVLPSKTAILPVNPTFLPR 194
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
SEDEREMC+RT+YCTNIDKKV+Q ++K FFE CGEV RLRLLGD+ HSTRIAFVEFAM
Sbjct: 195 SEDEREMCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAM 253
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++ID++V++ ++ F CG+V R+ GD R AFVEF E A
Sbjct: 198 EREMCARTVYCTNIDKKVSQAEVKNFFERACGEVSRLRLLGDHVHSTRIAFVEFAMAESA 257
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG P+RV PSKT + P P
Sbjct: 258 IVALNCSGLVLGTQPIRVSPSKTPVRPRVP 287
>gi|413921445|gb|AFW61377.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 315
Score = 287 bits (735), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 151/247 (61%), Positives = 173/247 (70%), Gaps = 25/247 (10%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLAN------GQIFNFNPAFFGPNGFGY---TNNFIMH 137
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F +
Sbjct: 39 EMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFAVA 98
Query: 138 TDG-------TANTNGHTTTRRKRNGYSQGKRRM---------NCRTSNAQQDEVIRRTV 181
+ G A + H K++G N RTS AQ+DE IRRTV
Sbjct: 99 SPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRRTV 158
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+
Sbjct: 159 YVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTV 218
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG+YPV+VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CG
Sbjct: 219 LGYYPVKVLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICG 278
Query: 302 EVQRLRL 308
EV R L
Sbjct: 279 EVGRSLL 285
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 202
>gi|388522717|gb|AFK49420.1| unknown [Medicago truncatula]
Length = 188
Score = 287 bits (734), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 131/160 (81%), Positives = 146/160 (91%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
+IRRTVYVSDIDQ VTEEQLA+LFL CGQVVDCR+CGDPNS+LRFAF+EFTDEE ARAA+
Sbjct: 1 MIRRTVYVSDIDQLVTEEQLASLFLNCGQVVDCRVCGDPNSILRFAFIEFTDEESARAAV 60
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
SL+GTMLG+YP+RVLPSKTAIAPVNPT LPRSEDEREMCSRTIYCTNIDKK+TQ D+K F
Sbjct: 61 SLSGTMLGYYPLRVLPSKTAIAPVNPTSLPRSEDEREMCSRTIYCTNIDKKLTQADVKHF 120
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
FES+CGEV RLRLLGDYQHSTRIAFVEFA+ + +C
Sbjct: 121 FESICGEVHRLRLLGDYQHSTRIAFVEFAVAESAIAALSC 160
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 4/96 (4%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD R AFVEF E A
Sbjct: 95 EREMCSRTIYCTNIDKKLTQADVKHFFESICGEVHRLRLLGDYQHSTRIAFVEFAVAESA 154
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
AALS +G +LG P+RV PSKT PV PRS
Sbjct: 155 IAALSCSGVILGALPIRVSPSKT---PVRARSSPRS 187
>gi|15220902|ref|NP_175769.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
gi|12324022|gb|AAG51971.1|AC024260_9 RNA-binding protein, putative; 40942-42923 [Arabidopsis thaliana]
gi|48427656|gb|AAT42377.1| At1g53650 [Arabidopsis thaliana]
gi|332194855|gb|AEE32976.1| CTC-interacting domain 8 protein [Arabidopsis thaliana]
Length = 314
Score = 286 bits (731), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 148/251 (58%), Positives = 173/251 (68%), Gaps = 17/251 (6%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIM--HTDGTANT 144
+M+ LV M KLNP A EF P N +++F++ G N
Sbjct: 49 QMKKLVAMFKKLNPEAKEFFPSYKRNTN---------------QSDDFVIAIKPSGEDNK 93
Query: 145 NGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
RR+ N + R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQ
Sbjct: 94 KVAINRRRRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQ 153
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
VVDCRICGDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFL
Sbjct: 154 VVDCRICGDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFL 213
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
PRSEDEREMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFA
Sbjct: 214 PRSEDEREMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFA 273
Query: 325 MVSEPFSWHAC 335
M + C
Sbjct: 274 MAESAVAALNC 284
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 52/83 (62%), Gaps = 1/83 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RT+Y +++D+ TE+ + T F + CG+V R+ GD R AFVEF E A A
Sbjct: 221 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 280
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL+ +G +LG P+RV PSKT +
Sbjct: 281 ALNCSGIVLGSQPIRVSPSKTPV 303
>gi|297812631|ref|XP_002874199.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
gi|297320036|gb|EFH50458.1| ctc-interacting domain 13 [Arabidopsis lyrata subsp. lyrata]
Length = 313
Score = 284 bits (727), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 157/332 (47%), Positives = 204/332 (61%), Gaps = 51/332 (15%)
Query: 1 MAVAENAGAKIDSSN-QNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGA 59
MAVAEN G K+DSS+ QNLD+ S +D + + + + N IQ
Sbjct: 1 MAVAENVGVKVDSSDDQNLDNNTTSLAETKPSCPDDQTPKSNSSVLTNELIQ-------- 52
Query: 60 GAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFN 119
+ E+ DL+ +S+LNPMA EFVP LA
Sbjct: 53 ------------------------RTSEV-DLMSEISRLNPMAKEFVPSFLAQTH----- 82
Query: 120 PAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRR 179
+ F + +TNNF + T R + QG+R +N +T+ Q ++VI+R
Sbjct: 83 -SEFLRSRLWFTNNFPVQAISTM-----------RRSFGQGRRWINKKTNLVQNEDVIKR 130
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TVYVSDIDQQVTEEQLA+LFL+CGQVVDCRICGD S+LRFAF+EFTD EGAR+AL +G
Sbjct: 131 TVYVSDIDQQVTEEQLASLFLSCGQVVDCRICGDHKSILRFAFIEFTDAEGARSALRKSG 190
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
T+ G +P+RV SKTAIAPVNP+FLPRSE+E E C +T+YCTNIDK+VT+ +++ FF++V
Sbjct: 191 TVFGSHPIRVHISKTAIAPVNPSFLPRSEEELEKCGKTVYCTNIDKQVTKMELENFFKTV 250
Query: 300 CGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFS 331
CGEV LRLLGD+ H TRIAFVEF + S
Sbjct: 251 CGEVHHLRLLGDFYHQTRIAFVEFKLAESAIS 282
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
+TVY ++ID+QVT+ +L F T CG+V R+ GD R AFVEF E A +AL+
Sbjct: 227 KTVYCTNIDKQVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNY 286
Query: 238 AGTMLGFYPVRVLPSKTAIAP 258
+G +LG P+R+ PSKT + P
Sbjct: 287 SGVVLGELPIRISPSKTPVRP 307
>gi|224061485|ref|XP_002300503.1| predicted protein [Populus trichocarpa]
gi|222847761|gb|EEE85308.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 284 bits (726), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 132/172 (76%), Positives = 150/172 (87%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
++ RTS AQ+++ +RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDPNSVL FAF+
Sbjct: 1 ISSRTSMAQREDTVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPNSVLHFAFI 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EFTDEEGARAALSL+GTMLG+YPV+VLPSKTAIAPVN TFLPR++DEREMC+RTIYCTNI
Sbjct: 61 EFTDEEGARAALSLSGTMLGYYPVKVLPSKTAIAPVNHTFLPRNDDEREMCARTIYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
D+ TQ DIKLFFES+CGEV RLRLLGD+ H TRIAFVEF M + C
Sbjct: 121 DRNFTQSDIKLFFESLCGEVYRLRLLGDHHHPTRIAFVEFVMAESAIAALNC 172
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 228
N + E+ RT+Y ++ID+ T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 104 NDDEREMCARTIYCTNIDRNFTQSDIKLFFESLCGEVYRLRLLGDHHHPTRIAFVEFVMA 163
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
E A AAL+ +G ++G P+RV PSKT + P P
Sbjct: 164 ESAIAALNCSGAVIGSLPIRVSPSKTPVRPRGP 196
>gi|224106628|ref|XP_002333653.1| predicted protein [Populus trichocarpa]
gi|222837945|gb|EEE76310.1| predicted protein [Populus trichocarpa]
Length = 158
Score = 283 bits (724), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 129/156 (82%), Positives = 146/156 (93%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
AQQ+E++RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDP SVLRFAF+EFTDEEG
Sbjct: 2 AQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEEG 61
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A+AALSL+GTMLG+YPV+VLPSKTAIAPVNPTFLPR++DEREMC+RTIYCTNID+ +TQ
Sbjct: 62 AQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQA 121
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
+IKLFFES+CGEV LRLLGD+ H TRIAFVEF MV
Sbjct: 122 NIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMV 157
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFT 226
N + E+ RT+Y ++ID+ +T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 98 NDDEREMCARTIYCTNIDRNLTQANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFV 155
>gi|224115532|ref|XP_002317057.1| predicted protein [Populus trichocarpa]
gi|222860122|gb|EEE97669.1| predicted protein [Populus trichocarpa]
Length = 195
Score = 283 bits (723), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/165 (78%), Positives = 147/165 (89%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
AQQ+E++RRTVYVSDIDQQVTEEQLA LF+ CGQVVDCRICGDP SVLRFAF+EFTDEEG
Sbjct: 2 AQQEEIVRRTVYVSDIDQQVTEEQLAALFINCGQVVDCRICGDPKSVLRFAFIEFTDEEG 61
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A+AALSL+GTMLG+YPV+VLPSKTAIAPVNPTFLPR++DEREMC+RTIYCTNID+ +TQ
Sbjct: 62 AQAALSLSGTMLGYYPVKVLPSKTAIAPVNPTFLPRNDDEREMCARTIYCTNIDRNLTQA 121
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
+IKLFFES+CGEV LRLLGD+ H TRIAFVEF M + C
Sbjct: 122 NIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMAESAIAALNC 166
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDE 228
N + E+ RT+Y ++ID+ +T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 98 NDDEREMCARTIYCTNIDRNLTQANIKLFFESLCGEVYHLRLLGDHHHPTRIAFVEFVMA 157
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
E A AAL+ +G +LG P+RV PSKT + P P
Sbjct: 158 ESAIAALNCSGVVLGSLPIRVSPSKTPVRPRGP 190
>gi|242051635|ref|XP_002454963.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
gi|241926938|gb|EES00083.1| hypothetical protein SORBIDRAFT_03g002180 [Sorghum bicolor]
Length = 298
Score = 280 bits (717), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 147/239 (61%), Positives = 176/239 (73%), Gaps = 6/239 (2%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLAN--GQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTN 145
++ LVD+LSKLNP A EFVP + A+ + + + F G N TD
Sbjct: 22 VQKLVDLLSKLNPAAKEFVPSAAASPPKKALSADAPVFDYRSIGGGNG---ATDAAFYVG 78
Query: 146 GHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
RR+ NGY +QG+RR N R A++++ IRRTVYVS++D VTEE+LA +F TCGQ
Sbjct: 79 FGNQHRRRGNGYINQGRRRTNDRVRRAEREDSIRRTVYVSELDHTVTEERLADIFATCGQ 138
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
VVDCRICGDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTAI PVNP FL
Sbjct: 139 VVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFL 198
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
PR+EDE+EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF
Sbjct: 199 PRTEDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEF 257
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ VT+ + F CG+V R+ GD R AFVEF EGA
Sbjct: 204 EKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGA 263
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 264 IMALNCSGMILGTLPVRVSPSKTPVKP 290
Score = 38.5 bits (88), Expect = 4.6, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 270 ERE-MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
ERE RT+Y + +D VT+ + F + CG+V R+ GD R AF+EF+
Sbjct: 106 EREDSIRRTVYVSELDHTVTEERLADIF-ATCGQVVDCRICGDPHSVLRFAFIEFS 160
>gi|8671859|gb|AAF78422.1|AC018748_1 Contains similarity to RNA-binding protein from Arabidopsis
thaliana gi|2129727 and contains RNA recognition
PF|00076 domain. ESTs gb|H37317, gb|F14415, gb|AA651290
come from this gene [Arabidopsis thaliana]
Length = 829
Score = 280 bits (715), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 144/244 (59%), Positives = 167/244 (68%), Gaps = 17/244 (6%)
Query: 94 MLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRK 153
M KLNP A EF P N +++F++ + N R+
Sbjct: 1 MFKKLNPEAKEFFPSYKRNTN---------------QSDDFVIAIKPSGEDNKKVAINRR 45
Query: 154 RNGYSQGKR--RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 211
R R R+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRIC
Sbjct: 46 RRNNYNQGRRVRLPGRASKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSSCGQVVDCRIC 105
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
GDPNSVLRFAFVEF+D++GAR+ALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 106 GDPNSVLRFAFVEFSDDQGARSALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDER 165
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFS 331
EMCSRTIYCTN+DK T+ D+ FF+S CGEV RLRLLGD HSTRIAFVEFAM +
Sbjct: 166 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 225
Query: 332 WHAC 335
C
Sbjct: 226 ALNC 229
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%), Gaps = 1/76 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RT+Y +++D+ TE+ + T F + CG+V R+ GD R AFVEF E A A
Sbjct: 166 EMCSRTIYCTNVDKNATEDDVNTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 225
Query: 234 ALSLAGTMLGFYPVRV 249
AL+ +G +LG P+ V
Sbjct: 226 ALNCSGIVLGSQPISV 241
>gi|297853152|ref|XP_002894457.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297340299|gb|EFH70716.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 769
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 145/235 (61%), Positives = 166/235 (70%), Gaps = 14/235 (5%)
Query: 94 MLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIM--HTDGTANTNGHTTTR 151
M KLNP A EF P N N +++F++ G N R
Sbjct: 1 MFKKLNPEAKEFFPSYKKNT------------NQSLSSDDFVIAKKPSGEDNKKDGINRR 48
Query: 152 RKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 211
R+ N + R+ R S AQ++ IRRTVYVSDIDQ VTEE LA LF +CGQVVDCRIC
Sbjct: 49 RRNNYNQGRRVRLPGRASKAQREVSIRRTVYVSDIDQSVTEEVLAGLFSSCGQVVDCRIC 108
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
GDPNSVLRFAFVEF+D++GARAALSL GTM+G+YPVRVLPSKTAI PVNPTFLPRSEDER
Sbjct: 109 GDPNSVLRFAFVEFSDDQGARAALSLGGTMIGYYPVRVLPSKTAILPVNPTFLPRSEDER 168
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
EMC+RTIYCTN+DK T+ +K FF+S CGEV RLRLLGD HSTRIAFVEFAM
Sbjct: 169 EMCTRTIYCTNVDKNATEDVVKTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMA 223
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 51/83 (61%), Gaps = 1/83 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RT+Y +++D+ TE+ + T F + CG+V R+ GD R AFVEF E A A
Sbjct: 169 EMCTRTIYCTNVDKNATEDVVKTFFQSACGEVTRLRLLGDQVHSTRIAFVEFAMAESAVA 228
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL+ +G +LG P+R+ ++A+
Sbjct: 229 ALNCSGIVLGSQPIRLSQMRSAL 251
>gi|326502318|dbj|BAJ95222.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 317
Score = 278 bits (710), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 151/256 (58%), Positives = 177/256 (69%), Gaps = 15/256 (5%)
Query: 78 KMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLA---------NGQIFNFNPAFFGPNGF 128
K E KD ++ LVD+LSKLNP A EFVP S A + +F + G
Sbjct: 26 KEAEYHKD--VQKLVDLLSKLNPAAKEFVPSSAAATPRKGLSADAPVFYYGSIGGRNGGI 83
Query: 129 GYTNNFIMHTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDID 187
G +I + + +RNGY + G+RR N R A ++E IRRTVYVS++D
Sbjct: 84 GADAGYIGYQQ---RMRRNFVDNERRNGYINHGRRRTNERARRADREESIRRTVYVSELD 140
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 247
VTEE+LA +F CGQVVDCRICGDPNSV+RFAF+EF EEGARAAL+L GTMLGFYPV
Sbjct: 141 HTVTEERLAEIFANCGQVVDCRICGDPNSVMRFAFIEFAGEEGARAALNLGGTMLGFYPV 200
Query: 248 RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 307
RVLPSKTAI PVNP FLP +EDE+EM RT+YCTNIDKKVTQ D+K FFE +CGEV RLR
Sbjct: 201 RVLPSKTAILPVNPKFLPATEDEKEMVIRTVYCTNIDKKVTQLDVKSFFEELCGEVSRLR 260
Query: 308 LLGDYQHSTRIAFVEF 323
LLGD HSTRIAFVEF
Sbjct: 261 LLGDNVHSTRIAFVEF 276
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VT+ + + F CG+V R+ GD R AFVEF + EGA
Sbjct: 223 EKEMVIRTVYCTNIDKKVTQLDVKSFFEELCGEVSRLRLLGDNVHSTRIAFVEFVNAEGA 282
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 283 IQALNCSGMILGTLPVRVSPSKTPVKP 309
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
D E RT+Y + +D VT+ + F + CG+V R+ GD R AF+EFA
Sbjct: 125 DREESIRRTVYVSELDHTVTEERLAEIFAN-CGQVVDCRICGDPNSVMRFAFIEFA 179
>gi|15238531|ref|NP_197832.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
gi|9758532|dbj|BAB08927.1| RNA-binding protein-like [Arabidopsis thaliana]
gi|332005928|gb|AED93311.1| CTC-interacting domain 13 protein [Arabidopsis thaliana]
Length = 320
Score = 276 bits (707), Expect = 8e-72, Method: Compositional matrix adjust.
Identities = 156/336 (46%), Positives = 204/336 (60%), Gaps = 44/336 (13%)
Query: 1 MAVAENAGAKIDSS-NQNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGA 59
MAVAEN G K+DSS NQN+D+ S S+D + + + N IQ
Sbjct: 1 MAVAENVGVKVDSSNNQNIDNNTTSLVETKPSCSDDQTPKSKSSVLTNELIQRTSE---- 56
Query: 60 GAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFN 119
VN+ + +H LNPMA EFVP LA +
Sbjct: 57 ------VNLKSEISH-----------------------LNPMAKEFVPSFLAQTH----H 83
Query: 120 PAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRR 179
F+G N F +TN+F T G T R+ + +G+ + +T+ Q +++I+R
Sbjct: 84 SEFWG-NRFWFTNHF---PKQTIFLIGQFATMRR--NFGKGRPWITKKTNLVQNEDMIKR 137
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TVYVSDID QVTEEQLA+LFL+CGQVVDCR+CGD S+LRFAF+EFTD EGAR+AL +G
Sbjct: 138 TVYVSDIDNQVTEEQLASLFLSCGQVVDCRMCGDYKSILRFAFIEFTDAEGARSALRKSG 197
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
TM G +P+RV SKTAIAPVNP+FLP+S+DE E C +T+YCTNIDK+VT+ +++ FF++V
Sbjct: 198 TMFGSHPIRVFMSKTAIAPVNPSFLPQSKDELEKCGKTVYCTNIDKEVTKMELENFFKTV 257
Query: 300 CGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
CGEV LRLLGD+ H TRIAFVEF + S C
Sbjct: 258 CGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNC 293
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 51/79 (64%), Gaps = 1/79 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
+TVY ++ID++VT+ +L F T CG+V R+ GD R AFVEF E A +AL+
Sbjct: 234 KTVYCTNIDKEVTKMELENFFKTVCGEVHHLRLLGDFYHQTRIAFVEFKLAESAISALNC 293
Query: 238 AGTMLGFYPVRVLPSKTAI 256
+G +LG P+RV PSKT +
Sbjct: 294 SGVVLGELPIRVSPSKTPV 312
>gi|357127346|ref|XP_003565343.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Brachypodium distachyon]
Length = 310
Score = 276 bits (706), Expect = 1e-71, Method: Compositional matrix adjust.
Identities = 148/240 (61%), Positives = 177/240 (73%), Gaps = 4/240 (1%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLA--NGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANT 144
+++ LVD+LS LNP A EFVP S A + + + + F G N G +T
Sbjct: 31 DVQKLVDLLSNLNPAAREFVPSSAAPPSKKALSADAPVFDYCSIGGANGG-SRDSGVDST 89
Query: 145 NGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG 203
+ R+GY + G+RRMN R A +++ IRRTVYVS++D VTEE+LA +F CG
Sbjct: 90 YIGNQQHKMRSGYINHGRRRMNERARRADREDSIRRTVYVSELDHTVTEERLADIFANCG 149
Query: 204 QVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTF 263
QVVDCRICGDP+SVLRFAF+EF+DEEGARAAL+L GTMLGFYPVRVLPSKTAI PVNP F
Sbjct: 150 QVVDCRICGDPHSVLRFAFIEFSDEEGARAALNLGGTMLGFYPVRVLPSKTAILPVNPKF 209
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
LPR+EDE+EM RTIYCTNIDKKVTQ D+K FF+ +CGEV RLRLLGD HSTRIAFVEF
Sbjct: 210 LPRTEDEKEMVIRTIYCTNIDKKVTQLDVKSFFQELCGEVSRLRLLGDNVHSTRIAFVEF 269
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RT+Y ++ID++VT+ + + F CG+V R+ GD R AFVEF + EGA
Sbjct: 216 EKEMVIRTIYCTNIDKKVTQLDVKSFFQELCGEVSRLRLLGDNVHSTRIAFVEFVNAEGA 275
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 276 IMALNCSGMILGTLPVRVSPSKTPVKP 302
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
D + RT+Y + +D VT+ + F + CG+V R+ GD R AF+EF+
Sbjct: 118 DREDSIRRTVYVSELDHTVTEERLADIFAN-CGQVVDCRICGDPHSVLRFAFIEFS 172
>gi|357140847|ref|XP_003571974.1| PREDICTED: uncharacterized protein LOC100841044 [Brachypodium
distachyon]
Length = 350
Score = 275 bits (704), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 152/257 (59%), Positives = 188/257 (73%), Gaps = 20/257 (7%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL-------------ANGQIFNFNPAFFGP-----NGF 128
+MR L +++SKLNP A EFVP S A+ +F FFG G
Sbjct: 53 DMRKLEELMSKLNPCAQEFVPSSRRAASAPAPGGGLSADAPVFVSAAEFFGAGAGQLQGT 112
Query: 129 GYTNNFIMHTDGTANTNGHTTTRR-KRNG-YSQGKRRMNCRTSNAQQDEVIRRTVYVSDI 186
G +DG++N G RR +RNG ++QG+RRM RT + +++ +RRTVYVSD+
Sbjct: 113 GAGGGRDSSSDGSSNGGGQPQNRRIRRNGSFNQGRRRMGGRTRRSDREDSVRRTVYVSDV 172
Query: 187 DQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYP 246
DQQVTE++LA +F CGQVVDCRICGDP+SVLRFAF+EF D+ GARAAL+LAGTMLG+YP
Sbjct: 173 DQQVTEQKLAEVFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALNLAGTMLGYYP 232
Query: 247 VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
VRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RL
Sbjct: 233 VRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEDDVKIFFQRLCGKVSRL 292
Query: 307 RLLGDYQHSTRIAFVEF 323
RLLGDY HST IAFVEF
Sbjct: 293 RLLGDYVHSTCIAFVEF 309
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VTE+ + F CG+V R+ GD AFVEFT E A
Sbjct: 256 EKEMVSRTVYCTNIDKKVTEDDVKIFFQRLCGKVSRLRLLGDYVHSTCIAFVEFTQAESA 315
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AL+ +G +LG P+RV PSKT + P +P +
Sbjct: 316 ILALNYSGLVLGSLPIRVSPSKTPVRPRSPRVM 348
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 1/56 (1%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
D + RT+Y +++D++VT+ + F S CG+V R+ GD R AF+EFA
Sbjct: 158 DREDSVRRTVYVSDVDQQVTEQKLAEVF-SNCGQVVDCRICGDPHSVLRFAFIEFA 212
>gi|226507984|ref|NP_001149092.1| LOC100282713 [Zea mays]
gi|195624680|gb|ACG34170.1| CID11 [Zea mays]
gi|414875767|tpg|DAA52898.1| TPA: CID11 [Zea mays]
Length = 299
Score = 274 bits (700), Expect = 5e-71, Method: Compositional matrix adjust.
Identities = 144/239 (60%), Positives = 174/239 (72%), Gaps = 6/239 (2%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSLAN--GQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTN 145
++ LVD+LS LNP A EFVP + A+ + + + F + G N TD
Sbjct: 23 VQKLVDLLSNLNPAAKEFVPSAAASPPKKALSADAPVFDYHSIGGGNG---ATDAAFYVG 79
Query: 146 GHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
R + NGY +QG+RR N R A +++ IRRTVYVS++D VTEE+LA +F TCGQ
Sbjct: 80 FGHQPRTRGNGYINQGRRRTNGRVRRADREDSIRRTVYVSELDHTVTEERLADIFTTCGQ 139
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
VVDCRICGDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTAI PVNP FL
Sbjct: 140 VVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFL 199
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
PR++DE+EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF
Sbjct: 200 PRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEF 258
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ VT+ + F CG+V R+ GD R AFVEF EGA
Sbjct: 205 EKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGA 264
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 265 IMALNCSGMILGTLPVRVSPSKTPVKP 291
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 30/56 (53%), Gaps = 1/56 (1%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
D + RT+Y + +D VT+ + F + CG+V R+ GD R AF+EF+
Sbjct: 107 DREDSIRRTVYVSELDHTVTEERLADIF-TTCGQVVDCRICGDPHSVLRFAFIEFS 161
>gi|449438949|ref|XP_004137250.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
gi|449483120|ref|XP_004156498.1| PREDICTED: protein MEI2-like 2-like [Cucumis sativus]
Length = 306
Score = 273 bits (699), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 143/245 (58%), Positives = 178/245 (72%), Gaps = 22/245 (8%)
Query: 91 LVDMLSKLNPMAAEFVPPSLANG--QIFNFNPAFFGPNGFGYTNNF-----IMHTDGTAN 143
L +M S LNP+A EF P S ++ Q F+F ++ N NF ++H+D
Sbjct: 32 LAEMFSNLNPLAKEFFPSSYSHHDRQDFHF---YYQNNNRSLAKNFQVADQLLHSDNN-- 86
Query: 144 TNGHTTTRRKRNGYS-QGKRRMNC-RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT 201
RR+R ++ QG+RRMN R+ AQQ+E IRRTVYVSDID+ V+EE+LA +F
Sbjct: 87 -------RRRRPEFNNQGRRRMNNNRSVRAQQEESIRRTVYVSDIDKDVSEEELAKVFRE 139
Query: 202 -CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
CG V DCRICGDP+SVLRFAFVEF +E ARAA+ L+GT++G YPV+VLPSKTAI PVN
Sbjct: 140 FCGYVNDCRICGDPHSVLRFAFVEFANEHSARAAVGLSGTVVGSYPVKVLPSKTAILPVN 199
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF 320
PTFLP+S DE +MC+RTIYCTNIDKKV+Q ++K FFE+ CGEV RLRLLGD HSTRIAF
Sbjct: 200 PTFLPKSNDEWDMCTRTIYCTNIDKKVSQAEVKSFFETSCGEVTRLRLLGDQLHSTRIAF 259
Query: 321 VEFAM 325
VEFA+
Sbjct: 260 VEFAL 264
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 1/81 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
RT+Y ++ID++V++ ++ + F T CG+V R+ GD R AFVEF E A AL+
Sbjct: 215 RTIYCTNIDKKVSQAEVKSFFETSCGEVTRLRLLGDQLHSTRIAFVEFALAETALQALNC 274
Query: 238 AGTMLGFYPVRVLPSKTAIAP 258
+G +LG P+RV PSKT + P
Sbjct: 275 SGMILGAQPIRVSPSKTPVRP 295
>gi|326514092|dbj|BAJ92196.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326532980|dbj|BAJ89335.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 351
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 144/263 (54%), Positives = 179/263 (68%), Gaps = 28/263 (10%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANG----QIFNFNPAFFGP--------NGFGYTNNF 134
++R L ++ KLNP A EFVP S G ++ P F P + F +
Sbjct: 52 DVRKLEELFKKLNPSAEEFVPLSRRQGDGARRLSADAPVFVSPAIDYYAPHHPFQHQQMH 111
Query: 135 IMH-------------TDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTV 181
++ +DG+AN RR+RNG++QG+RRM R +++ +RRTV
Sbjct: 112 VLQVVGGGGGAGRDSSSDGSANGQ---PNRRRRNGFNQGRRRMGVRPRRTDREDSVRRTV 168
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDIDQ VTE++LA +F CGQVVDCRICGDPNSV+RFAF+EF D+ GARAAL+L GT+
Sbjct: 169 YVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALGGTV 228
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LGFYPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +CG
Sbjct: 229 LGFYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEGICG 288
Query: 302 EVQRLRLLGDYQHSTRIAFVEFA 324
EV RLRLLGDY H+T IAFVEF
Sbjct: 289 EVARLRLLGDYVHATCIAFVEFV 311
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ V E+ + F CG+V R+ GD AFVEF + EGA
Sbjct: 257 EKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHATCIAFVEFVEAEGA 316
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG PVRV PSKT + P +P
Sbjct: 317 ILALNCSGMLLGSLPVRVSPSKTPVRPRSP 346
>gi|413941690|gb|AFW74339.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 286
Score = 270 bits (690), Expect = 8e-70, Method: Compositional matrix adjust.
Identities = 138/219 (63%), Positives = 158/219 (72%), Gaps = 20/219 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTN---NFIMHTDGTAN 143
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F + + G
Sbjct: 35 EMRDLEDLLSKLNPMAEEFVPPSLASPA--ALTPAPLSPAAYGFYPAGAGFAVASPGHGG 92
Query: 144 TNGHTTTRRKR--------------NGYSQ-GKRRMNCRTSNAQQDEVIRRTVYVSDIDQ 188
G +G+ +RR N RTS AQ+DE+IRRTVYVSDID
Sbjct: 93 VVGFPAVADAHAARGRKKGGAGGGFSGHGHPARRRTNSRTSMAQRDEIIRRTVYVSDIDH 152
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 153 QVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 212
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKV
Sbjct: 213 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKV 251
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
E+ RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF
Sbjct: 139 EIIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 189
>gi|218190389|gb|EEC72816.1| hypothetical protein OsI_06525 [Oryza sativa Indica Group]
Length = 287
Score = 268 bits (686), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 145/247 (58%), Positives = 179/247 (72%), Gaps = 17/247 (6%)
Query: 95 LSKLNPMAAEFVPPSL---------------ANGQIFNFNPAFFGPNGFGYTNNFIMHTD 139
+SKLNP A EFVP S A+ +F +F +G G +
Sbjct: 1 MSKLNPRAQEFVPSSRRAPPSSAAQAAVGLSADAPVFVSAAEYFVGSGAGAGGVGGRDSS 60
Query: 140 GTANTNG--HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
++NG RR+R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA
Sbjct: 61 SDGSSNGGGQPQNRRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAE 120
Query: 198 LFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIA 257
+F CGQVVDCRICGDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI
Sbjct: 121 VFSNCGQVVDCRICGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAIL 180
Query: 258 PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR 317
PVNP FLPR+EDE+EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST
Sbjct: 181 PVNPKFLPRTEDEKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTC 240
Query: 318 IAFVEFA 324
IAFVEFA
Sbjct: 241 IAFVEFA 247
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VTEE + F CG+V R+ GD AFVEF E A
Sbjct: 193 EKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESA 252
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AL+ +G +LG P+RV PSKT + P +P +
Sbjct: 253 ILALNYSGMVLGTLPIRVSPSKTPVRPRSPRVM 285
>gi|297829996|ref|XP_002882880.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
gi|297328720|gb|EFH59139.1| ctc-interacting domain 9 [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 267 bits (682), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 145/256 (56%), Positives = 169/256 (66%), Gaps = 12/256 (4%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPA--FFGPNGFGYTNNFIMHT-DGTAN 143
+M+ LV M KLNP+A EF P + + A F + F TN D A
Sbjct: 57 DMQKLVAMFKKLNPLAKEFFPSYYDPKKNHHVGKANQFLSADDFATTNKQSGEEFDPDAK 116
Query: 144 TNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG 203
+ +T RKR YSQG+RR+ R S AQ+++ IRRTVYVSDIDQ VTEE LA LF CG
Sbjct: 117 KDDNT---RKRRNYSQGRRRLTGRISKAQREDSIRRTVYVSDIDQSVTEEGLAGLFSNCG 173
Query: 204 QVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVL----PSKTAIAPV 259
QVVDCRICGDP+SVLRFAFVEF D++GAR ALSL GTMLGFYPVRV S++ I+
Sbjct: 174 QVVDCRICGDPHSVLRFAFVEFADDQGAREALSLGGTMLGFYPVRVKNCHSTSESHISSK 233
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
SEDEREMC+RTIYCTNIDKKV+Q D++ FFES CGEV RLRLLGD HSTRIA
Sbjct: 234 GK--CSDSEDEREMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIA 291
Query: 320 FVEFAMVSEPFSWHAC 335
FVEF + C
Sbjct: 292 FVEFTLADSALRALNC 307
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 53/85 (62%), Gaps = 1/85 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E+ RT+Y ++ID++V++ + F + CG+V R+ GD R AFVEFT + A
Sbjct: 244 EMCTRTIYCTNIDKKVSQADVRNFFESACGEVTRLRLLGDQLHSTRIAFVEFTLADSALR 303
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G ++G P+RV PSKT + P
Sbjct: 304 ALNCSGMVVGSQPIRVSPSKTPVRP 328
>gi|357124236|ref|XP_003563809.1| PREDICTED: uncharacterized protein LOC100835921 [Brachypodium
distachyon]
Length = 351
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 146/263 (55%), Positives = 179/263 (68%), Gaps = 28/263 (10%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL--ANG--QIFNFNPAFFGPNGFGYTNNFIM------ 136
++R L ++ KLNP A EFVP S A+G ++ P F P Y +
Sbjct: 52 DVRKLEELFKKLNPSAEEFVPLSRRQADGGRRLSADAPVFVSPAIDYYAPHHPFQQQQPQ 111
Query: 137 ---------------HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTV 181
+DG+ N + RR+RNG++QG+RRM R +++ +RRTV
Sbjct: 112 QMHVLQVVGGGGRDSSSDGSVNGQPN---RRRRNGFNQGRRRMGPRPRRTDREDSVRRTV 168
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
YVSDIDQ VTE++LA +F CGQVVDCRICGDPNSV+RFAF+EF D+ GARAALSLAGT+
Sbjct: 169 YVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALSLAGTI 228
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +CG
Sbjct: 229 LGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKKFFEGICG 288
Query: 302 EVQRLRLLGDYQHSTRIAFVEFA 324
EV RLRLLGDY HST IAFVEF
Sbjct: 289 EVARLRLLGDYVHSTCIAFVEFV 311
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ V E+ + F CG+V R+ GD AFVEF EGA
Sbjct: 257 EKEMVSRTVYCTNIDKNVPEDVVKKFFEGICGEVARLRLLGDYVHSTCIAFVEFVQAEGA 316
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG PVRV PSKT + P +P
Sbjct: 317 IMALNCSGMLLGSLPVRVSPSKTPVRPRSP 346
>gi|115445273|ref|NP_001046416.1| Os02g0244600 [Oryza sativa Japonica Group]
gi|50252270|dbj|BAD28276.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|113535947|dbj|BAF08330.1| Os02g0244600 [Oryza sativa Japonica Group]
Length = 359
Score = 266 bits (681), Expect = 7e-69, Method: Compositional matrix adjust.
Identities = 127/174 (72%), Positives = 153/174 (87%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RR+R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRI
Sbjct: 146 RRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRI 205
Query: 211 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 270
CGDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI PVNP FLPR+EDE
Sbjct: 206 CGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDE 265
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST IAFVEFA
Sbjct: 266 KEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFA 319
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VTEE + F CG+V R+ GD AFVEF E A
Sbjct: 265 EKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESA 324
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AL+ +G +LG P+RV PSKT + P +P +
Sbjct: 325 ILALNYSGMVLGTLPIRVSPSKTPVRPRSPRVM 357
>gi|125581461|gb|EAZ22392.1| hypothetical protein OsJ_06050 [Oryza sativa Japonica Group]
Length = 299
Score = 266 bits (681), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 127/174 (72%), Positives = 153/174 (87%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RR+R+G++QG+RR RT A +++ +RRTVYVSDIDQQVTE++LA +F CGQVVDCRI
Sbjct: 86 RRRRSGFNQGRRRTGGRTRRADREDSVRRTVYVSDIDQQVTEQKLAEVFSNCGQVVDCRI 145
Query: 211 CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 270
CGDP+SVLRFAF+EF D+ GARAAL+L GTMLG+YPVRVLPSKTAI PVNP FLPR+EDE
Sbjct: 146 CGDPHSVLRFAFIEFADDAGARAALTLGGTMLGYYPVRVLPSKTAILPVNPKFLPRTEDE 205
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+EM SRT+YCTNIDKKVT+ D+K+FF+ +CG+V RLRLLGDY HST IAFVEFA
Sbjct: 206 KEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFA 259
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 56/93 (60%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VTEE + F CG+V R+ GD AFVEF E A
Sbjct: 205 EKEMVSRTVYCTNIDKKVTEEDVKIFFQQLCGKVSRLRLLGDYVHSTCIAFVEFAQAESA 264
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AL+ +G +LG P+RV PSKT + P +P +
Sbjct: 265 ILALNYSGMVLGTLPIRVSPSKTPVRPRSPRVM 297
>gi|226530673|ref|NP_001141946.1| uncharacterized protein LOC100274095 [Zea mays]
gi|194706550|gb|ACF87359.1| unknown [Zea mays]
gi|195626910|gb|ACG35285.1| CID11 [Zea mays]
gi|413947723|gb|AFW80372.1| CID11 [Zea mays]
Length = 302
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/250 (57%), Positives = 175/250 (70%), Gaps = 24/250 (9%)
Query: 88 MRDLVDMLSKLNPMAAEFVPPSL-------------ANGQIFNFNPAFFGPNGFGYTNNF 134
++ LVD+LS LNP A EFVP S A+ +F++ + G NG
Sbjct: 22 VQKLVDLLSNLNPAAKEFVPSSAPAAAASPPKKALSADAPVFDYR-STAGGNG------- 73
Query: 135 IMHTDGTANTNGHTTTRRKRNGY-SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEE 193
TD R++ NGY +QG+RR N R A +++ +RRTVYVS++D VTEE
Sbjct: 74 --ATDDPFYVGFGNQQRKRGNGYINQGRRRTNDRLRRADREDSVRRTVYVSELDHTVTEE 131
Query: 194 QLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK 253
+LA +F TCG VVDCRICGDP+SVLRFAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSK
Sbjct: 132 RLADIFATCGHVVDCRICGDPHSVLRFAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSK 191
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
TAI PVNP FLPR++DE+EM RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD
Sbjct: 192 TAILPVNPKFLPRTDDEKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNV 251
Query: 314 HSTRIAFVEF 323
HSTRIAFVEF
Sbjct: 252 HSTRIAFVEF 261
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ VT+ + F CG+V R+ GD R AFVEF EGA
Sbjct: 208 EKEMVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGA 267
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAP 258
AL+ +G +LG PVRV PSKT + P
Sbjct: 268 IMALNCSGMILGTLPVRVSPSKTPVKP 294
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)
Query: 269 DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
D + RT+Y + +D VT+ + F + CG V R+ GD R AF+EF+
Sbjct: 110 DREDSVRRTVYVSELDHTVTEERLADIF-ATCGHVVDCRICGDPHSVLRFAFIEFS 164
>gi|242093252|ref|XP_002437116.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
gi|241915339|gb|EER88483.1| hypothetical protein SORBIDRAFT_10g021290 [Sorghum bicolor]
Length = 364
Score = 262 bits (669), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 146/275 (53%), Positives = 178/275 (64%), Gaps = 38/275 (13%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL--ANGQIFNFN---PAFFGPNGFGYTNNFI------ 135
++R L ++ SKLNP A EFVPPS +G + P F P Y +
Sbjct: 51 DIRKLEELFSKLNPSAEEFVPPSRRRVDGGARRLSADAPVFVSPAIDYYARHHQLPPPPL 110
Query: 136 -----MHT--------------------DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSN 170
MH + NG RR+RNG+ QG+RRM
Sbjct: 111 QQQQPMHVLQFVGGVGGGGMGGGGGRDSSSDGSVNGQPN-RRRRNGFIQGRRRMMGGRPR 169
Query: 171 -AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
+ +++ +RRTVYVSDIDQ VTE++LA +F TCGQVVDCRICGDPNSVLRFAF+EF D+
Sbjct: 170 RSDREDSVRRTVYVSDIDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEFADDV 229
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
GA+AAL+L GT+LGFYPV+VLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDKK+ +
Sbjct: 230 GAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKKIGE 289
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
++K FFE CGEV RLRLLGDY HST IAFVEF
Sbjct: 290 DEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFV 324
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+++ E+++ F TCG+V R+ GD AFVEF + A
Sbjct: 270 EKEMVSRTVYCTNIDKKIGEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSA 329
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG PVRV PSKT + P +P
Sbjct: 330 ILALNCSGIVLGTLPVRVSPSKTPVRPRSP 359
>gi|218198344|gb|EEC80771.1| hypothetical protein OsI_23281 [Oryza sativa Indica Group]
Length = 372
Score = 261 bits (666), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 176/275 (64%), Gaps = 27/275 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVP------PSLANGQIFNFNPAFFGPNGFGYTNNFI----- 135
+ R L ++ KLNP A EFVP ++ P F P Y+ + +
Sbjct: 63 DARKLEELFKKLNPSAEEFVPLARRRGGGDGARRLSADAPVFVSPAIDFYSQHPVQQPPP 122
Query: 136 ---------------MHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT 180
+ + +TNG RR+R+ ++QG+RRM R +++ +RRT
Sbjct: 123 IQVLPVVVGGGGGAGLDSSSDGSTNGQ-PNRRRRSSFNQGRRRMGGRPRRTDREDSVRRT 181
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
VYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAF+EF D+ GARAAL+L GT
Sbjct: 182 VYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVGARAALTLGGT 241
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
+LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +C
Sbjct: 242 VLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAVKSFFEGMC 301
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
GEV RLRLLGDY HST IAFVEF +C
Sbjct: 302 GEVARLRLLGDYVHSTCIAFVEFVQADSAILALSC 336
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ V E+ + + F CG+V R+ GD AFVEF + A
Sbjct: 271 EKEMVSRTVYCTNIDKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSA 330
Query: 232 RAALSLAGTMLGFYPVR-------VLPSKTAIAPVNP 261
ALS +G +LG PVR V PSKT + P +P
Sbjct: 331 ILALSCSGMVLGALPVRQANTPYAVSPSKTPVRPRSP 367
>gi|222635710|gb|EEE65842.1| hypothetical protein OsJ_21610 [Oryza sativa Japonica Group]
Length = 367
Score = 260 bits (665), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 141/275 (51%), Positives = 176/275 (64%), Gaps = 27/275 (9%)
Query: 87 EMRDLVDMLSKLNPMAAEFVP------PSLANGQIFNFNPAFFGPNGFGYTNNFI----- 135
+ R L ++ KLNP A EFVP ++ P F P Y+ + +
Sbjct: 60 DARKLEELFKKLNPSAEEFVPLARRRGGGDGARRLSADAPVFVSPAIDFYSQHPVQQPPP 119
Query: 136 ---------------MHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT 180
+ + +TNG RR+R+ ++QG+RRM R +++ +RRT
Sbjct: 120 IQVLPVVVGGGGGAGLDSSSDGSTNGQ-PNRRRRSSFNQGRRRMGGRPRRTDREDSVRRT 178
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
VYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAF+EF D+ GARAAL+L GT
Sbjct: 179 VYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFIEFADDVGARAALTLGGT 238
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
+LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +C
Sbjct: 239 VLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDAVKSFFEGMC 298
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
GEV RLRLLGDY HST IAFVEF +C
Sbjct: 299 GEVARLRLLGDYVHSTCIAFVEFVQADSAILALSC 333
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ V E+ + + F CG+V R+ GD AFVEF + A
Sbjct: 268 EKEMVSRTVYCTNIDKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSA 327
Query: 232 RAALSLAGTMLGFYP 246
ALS +G +LG P
Sbjct: 328 ILALSCSGMVLGALP 342
>gi|62867578|emb|CAI84654.1| hypothetical protein [Nicotiana tabacum]
Length = 201
Score = 259 bits (663), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 124/162 (76%), Positives = 138/162 (85%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
MN R AQ+++ IRRTVYV++ID VTEEQLA LF GQVVDCRICGDP+S LRFAFV
Sbjct: 1 MNNRAYKAQREDSIRRTVYVAEIDNNVTEEQLAALFSAYGQVVDCRICGDPHSRLRFAFV 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EF DE ARAALSL GT+LGF P++VLPSKTAI PVNPTFLPRSEDEREMC+RT+YCTNI
Sbjct: 61 EFADEYSARAALSLCGTILGFSPLKVLPSKTAILPVNPTFLPRSEDEREMCARTVYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
DKKVTQ D+K FFE+ CGEV RLRLLGD+ HSTRIAFVEF M
Sbjct: 121 DKKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVM 162
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/96 (43%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++ID++VT+ + F T CG+V R+ GD R AFVEF E A
Sbjct: 107 EREMCARTVYCTNIDKKVTQADVKNFFETRCGEVSRLRLLGDHVHSTRIAFVEFVMAESA 166
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
AL G +LG +RV PSKT PV P LPR+
Sbjct: 167 ILALDCCGEILGSQRIRVSPSKT---PVRPR-LPRA 198
>gi|413941689|gb|AFW74338.1| hypothetical protein ZEAMMB73_453710 [Zea mays]
Length = 182
Score = 258 bits (660), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/137 (86%), Positives = 130/137 (94%)
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YPVR
Sbjct: 7 RVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPVR 66
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGEV RLRL
Sbjct: 67 VLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRL 126
Query: 309 LGDYQHSTRIAFVEFAM 325
LGDY HSTRIAFVEF M
Sbjct: 127 LGDYHHSTRIAFVEFVM 143
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF E A
Sbjct: 88 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 147
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P P
Sbjct: 148 TAALNCSGVILGSLPIRVSPSKTPVRPRAP 177
>gi|212274583|ref|NP_001130716.1| hypothetical protein [Zea mays]
gi|194689926|gb|ACF79047.1| unknown [Zea mays]
gi|413954111|gb|AFW86760.1| hypothetical protein ZEAMMB73_977651 [Zea mays]
Length = 365
Score = 256 bits (654), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 145/278 (52%), Positives = 178/278 (64%), Gaps = 39/278 (14%)
Query: 85 DCEMRDLVDMLSKLNPMAAEFVPPSL--ANGQIFNFN---PAFFGPNGFGYTNNFI---- 135
+ +MR L ++LSKLNP A EFVP S +G + P F P Y +
Sbjct: 49 ESDMRKLEELLSKLNPSAEEFVPQSRRRVDGGAPRLSADAPVFVSPAIDYYARHHQLPPP 108
Query: 136 --------MHT--------------------DGTANTNGHTTTRRKRNGYSQGKRRM-NC 166
MH + NG RR+RNG+ QG+RRM
Sbjct: 109 PLLQQQQPMHVLQFVGGVGGVGMGGGGGMDSSSDGSANGQPN-RRRRNGFIQGRRRMMGA 167
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 226
R A +++ +RRTVYVSD+DQ VTE++LA +F TCGQVVDCRICGDPNSVLRFAF+EF
Sbjct: 168 RPRRADREDSVRRTVYVSDVDQHVTEQKLAEVFSTCGQVVDCRICGDPNSVLRFAFIEFA 227
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
D+ A+AAL+L GT+LGFYPV+VLPSKTAI PVNP FLP ++DE+EM SRT+YCTNIDKK
Sbjct: 228 DDVAAQAALALGGTVLGFYPVKVLPSKTAILPVNPKFLPHTDDEKEMVSRTVYCTNIDKK 287
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+ + ++K FFE CGEV RLRLLGDY HST IAFVEF
Sbjct: 288 IAEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFV 325
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+++ E+++ F TCG+V R+ GD AFVEF + A
Sbjct: 271 EKEMVSRTVYCTNIDKKIAEDEVKQFFEGTCGEVSRLRLLGDYVHSTCIAFVEFVQADSA 330
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG PVRV PSKT + +P
Sbjct: 331 ILALNCSGIVLGTLPVRVSPSKTPVRSRSP 360
>gi|413916285|gb|AFW56217.1| hypothetical protein ZEAMMB73_723080 [Zea mays]
Length = 246
Score = 256 bits (653), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 120/143 (83%), Positives = 130/143 (90%), Gaps = 4/143 (2%)
Query: 187 DQQ----VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTML 242
DQQ VTEE LA LF+ CGQVVDC +CGDPNSVLRF F+EFTDEEGARAAL+L+GTML
Sbjct: 16 DQQIVFKVTEENLAALFINCGQVVDCHMCGDPNSVLRFTFIEFTDEEGARAALNLSGTML 75
Query: 243 GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 302
G+YPVRVLPSKTAIAPVNPTFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE
Sbjct: 76 GYYPVRVLPSKTAIAPVNPTFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 135
Query: 303 VQRLRLLGDYQHSTRIAFVEFAM 325
V RLRLLGDY HSTRIAFVEF M
Sbjct: 136 VFRLRLLGDYHHSTRIAFVEFVM 158
Score = 44.3 bits (103), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFT 226
+ E+ RT+Y ++ID++VT+ L F + CG+V R+ GD + R AFVEF
Sbjct: 103 EREMCARTIYCTNIDKKVTQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFV 157
>gi|414868267|tpg|DAA46824.1| TPA: hypothetical protein ZEAMMB73_802900 [Zea mays]
Length = 328
Score = 249 bits (635), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 113/137 (82%), Positives = 125/137 (91%)
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTD+EGARAAL+L+G MLG+YPV
Sbjct: 152 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDDEGARAALNLSGNMLGYYPVN 211
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
VLPSKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDK V Q D+KLFFES+CGEV RLRL
Sbjct: 212 VLPSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRL 271
Query: 309 LGDYQHSTRIAFVEFAM 325
LGDY HSTRIAFVEF M
Sbjct: 272 LGDYHHSTRIAFVEFVM 288
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+ V + L F + CG+V R+ GD + R AFVEF E A
Sbjct: 233 EREMCARTIYCTNIDKMVAQADLKLFFESICGEVFRLRLLGDYHHSTRIAFVEFVMAESA 292
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AAL+ +G +LG P+RV PSKT + P +P
Sbjct: 293 TAALNSSGVVLGSLPIRVNPSKTPVRPRDP 322
>gi|53793069|dbj|BAD54280.1| putative RNA-binding protein [Oryza sativa Japonica Group]
gi|53793076|dbj|BAD54286.1| putative RNA-binding protein [Oryza sativa Japonica Group]
Length = 206
Score = 246 bits (629), Expect = 8e-63, Method: Compositional matrix adjust.
Identities = 116/172 (67%), Positives = 135/172 (78%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFV 223
M R +++ +RRTVYVSDIDQ VTE++LA +F CGQVVDCRICGDPNSVLRFAF+
Sbjct: 1 MGGRPRRTDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGQVVDCRICGDPNSVLRFAFI 60
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
EF D+ GARAAL+L GT+LG+YPVRVLPSKTAI PVNP FLPR+EDE+EM SRT+YCTNI
Sbjct: 61 EFADDVGARAALTLGGTVLGYYPVRVLPSKTAILPVNPKFLPRTEDEKEMVSRTVYCTNI 120
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
DK V + +K FFE +CGEV RLRLLGDY HST IAFVEF +C
Sbjct: 121 DKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSAILALSC 172
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 1/75 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ V E+ + + F CG+V R+ GD AFVEF + A
Sbjct: 107 EKEMVSRTVYCTNIDKNVPEDAVKSFFEGMCGEVARLRLLGDYVHSTCIAFVEFVQADSA 166
Query: 232 RAALSLAGTMLGFYP 246
ALS +G +LG P
Sbjct: 167 ILALSCSGMVLGALP 181
>gi|212274823|ref|NP_001130545.1| uncharacterized protein LOC100191644 [Zea mays]
gi|194689440|gb|ACF78804.1| unknown [Zea mays]
gi|224030729|gb|ACN34440.1| unknown [Zea mays]
gi|413926010|gb|AFW65942.1| CID11 [Zea mays]
Length = 379
Score = 246 bits (628), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/276 (49%), Positives = 176/276 (63%), Gaps = 38/276 (13%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSL-------------------ANGQIFNFNPAFFGPNG 127
+++ L +++SKLNP A EFVP S A+ +F ++G G
Sbjct: 64 DLKKLENLMSKLNPCAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYGAAG 123
Query: 128 ------------------FGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTS 169
G ++ ++G + H RR+RN ++ G+RR
Sbjct: 124 GHLEIGGGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAGGRP 183
Query: 170 NAQQDE-VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
E +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAF+EF+D+
Sbjct: 184 RRGDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSDD 243
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
GARAAL+LAGT+LG YPVRVLPSKTAI PVNP FLP+++DE+EM SRT+YCTNIDKKVT
Sbjct: 244 GGARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDKKVT 303
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+ D+K FF+ CG+V RLRLL D HST IAFVEFA
Sbjct: 304 EEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFA 339
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VTEE + F CG+V R+ D AFVEF E A
Sbjct: 285 EKEMVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESA 344
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AL+ +G +LG P+RV PSKT + P +P +
Sbjct: 345 IMALNFSGMVLGSLPIRVSPSKTPVRPRSPRVM 377
>gi|195626410|gb|ACG35035.1| CID11 [Zea mays]
Length = 378
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 136/274 (49%), Positives = 175/274 (63%), Gaps = 36/274 (13%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPS------------LANGQIFNFNPAFFGPNGFGY---- 130
+++ L +++SKLNP A EFVP S A G++ + + F Y
Sbjct: 65 DLKKLENLMSKLNPSAQEFVPSSRRTAPAAVAAAKPAGGRVLSADAPVFVSAAEYYGAAG 124
Query: 131 -------------------TNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNA 171
++ ++G + H RR+RN ++ G+RR
Sbjct: 125 GHLEIGGGGGKVVVGGGGRDSSSDGSSNGGGGGSRHQPNRRRRNSFNHGRRRGAGGRPRR 184
Query: 172 QQDE-VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
E +RRTVYVSDIDQ VTE++LA +F CG+VVDCRICGDP+SVLRFAF+EF+D+ G
Sbjct: 185 GDREDSVRRTVYVSDIDQHVTEQKLAEVFSNCGRVVDCRICGDPHSVLRFAFIEFSDDAG 244
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
ARAAL+LAGT+LG YPVRVLPSKTAI PVNP FLP+++DE+EM SRT+YCTNIDKKVT+
Sbjct: 245 ARAALTLAGTILGCYPVRVLPSKTAILPVNPKFLPQTDDEKEMVSRTVYCTNIDKKVTEE 304
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
D+K FF+ CG+V RLRLL D HST IAFVEFA
Sbjct: 305 DVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFA 338
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 55/93 (59%), Gaps = 1/93 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID++VTEE + F CG+V R+ D AFVEF E A
Sbjct: 284 EKEMVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESA 343
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
AL+ +G +LG P+RV PSKT + P +P +
Sbjct: 344 IMALNFSGMVLGSLPIRVSPSKTPVRPRSPRVM 376
>gi|159464635|ref|XP_001690547.1| RNA binding protein [Chlamydomonas reinhardtii]
gi|158280047|gb|EDP05806.1| RNA binding protein [Chlamydomonas reinhardtii]
Length = 464
Score = 213 bits (541), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 124/172 (72%)
Query: 152 RKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC 211
++ +G G++ + +E IRRTVY+S +D +TEE LA F CG+++DCRIC
Sbjct: 168 QQHSGRGPGQQAQKKKRPQKGLEENIRRTVYISYVDCSLTEENLAAFFSDCGRILDCRIC 227
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
GDPNS +RFAF+EF D E A AL G++LG P+RVLPSKTAI PVN +PRS DE
Sbjct: 228 GDPNSAMRFAFIEFMDVECAAKALEKTGSVLGNSPLRVLPSKTAIMPVNQELMPRSADEV 287
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
E CSRT+Y NIDKKV + D+K FFES+CG+V R+RLLGDY HSTRIAFVEF
Sbjct: 288 ERCSRTVYAANIDKKVDKNDVKAFFESLCGKVSRIRLLGDYAHSTRIAFVEF 339
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 174 DEVIR--RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
DEV R RTVY ++ID++V + + F + CG+V R+ GD R AFVEF EG
Sbjct: 285 DEVERCSRTVYAANIDKKVDKNDVKAFFESLCGKVSRIRLLGDYAHSTRIAFVEFHHAEG 344
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
A AAL+ +G +LG P+RV PSKT +
Sbjct: 345 ALAALNCSGALLGSLPIRVSPSKTPV 370
>gi|218201903|gb|EEC84330.1| hypothetical protein OsI_30837 [Oryza sativa Indica Group]
Length = 353
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 135/190 (71%), Gaps = 3/190 (1%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
+G ++T H + R RN QG+ + R AQ++E +RRT++VSDID VTE+ LA
Sbjct: 120 NGISSTR-HWSRRGSRNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAE 178
Query: 198 LFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LF + C VVDCRICGD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI
Sbjct: 179 LFGSYCSVVVDCRICGDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAI 238
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
PVNP+FLP+SE EREMCSRTIYCTNIDK V D+K F E G+V RL+LLGD H T
Sbjct: 239 MPVNPSFLPQSEAEREMCSRTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPT 298
Query: 317 RIAFVEFAMV 326
RIAF+EFA V
Sbjct: 299 RIAFIEFAEV 308
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC----GQVVDCRICGDPNSVLRFAFVEFTDE 228
+ E+ RT+Y ++ID+ V L C GQV ++ GD R AF+EF +
Sbjct: 252 EREMCSRTIYCTNIDKSVNVTDLKYF---CEEHFGQVFRLKLLGDDGHPTRIAFIEFAEV 308
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+GA AL+ +G P+RV PSKT I V
Sbjct: 309 DGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 326 VSEPFS 331
S+ ++
Sbjct: 210 ESDAYA 215
>gi|222641306|gb|EEE69438.1| hypothetical protein OsJ_28831 [Oryza sativa Japonica Group]
Length = 353
Score = 211 bits (537), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 112/190 (58%), Positives = 135/190 (71%), Gaps = 3/190 (1%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
+G ++T H + R RN QG+ + R AQ++E +RRT++VSDID VTE+ LA
Sbjct: 120 NGISSTR-HWSRRGSRNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAE 178
Query: 198 LFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LF + C VVDCRICGD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI
Sbjct: 179 LFGSYCSVVVDCRICGDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAI 238
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
PVNP+FLP+SE EREMCSRTIYCTNIDK V D+K F E G+V RL+LLGD H T
Sbjct: 239 MPVNPSFLPQSEAEREMCSRTIYCTNIDKSVNVTDLKYFCEEHFGQVFRLKLLGDDGHPT 298
Query: 317 RIAFVEFAMV 326
RIAF+EFA V
Sbjct: 299 RIAFIEFAEV 308
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 47/91 (51%), Gaps = 7/91 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC----GQVVDCRICGDPNSVLRFAFVEFTDE 228
+ E+ RT+Y ++ID+ V L C GQV ++ GD R AF+EF +
Sbjct: 252 EREMCSRTIYCTNIDKSVNVTDLKYF---CEEHFGQVFRLKLLGDDGHPTRIAFIEFAEV 308
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+GA AL+ +G P+RV PSKT I V
Sbjct: 309 DGAINALNSSGIFASGQPIRVCPSKTPIRSV 339
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 326 VSEPFS 331
S+ ++
Sbjct: 210 ESDAYA 215
>gi|413954119|gb|AFW86768.1| hypothetical protein ZEAMMB73_327506 [Zea mays]
Length = 219
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/138 (71%), Positives = 119/138 (86%), Gaps = 3/138 (2%)
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
+VTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+GT+LG+YP+
Sbjct: 39 EVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSGTVLGYYPIN 98
Query: 249 VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR- 307
VL SKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE++ R
Sbjct: 99 VLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGELKVCRN 158
Query: 308 --LLGDYQHSTRIAFVEF 323
+ D + + + F++F
Sbjct: 159 GTIKIDLETNKIMDFIKF 176
>gi|326508995|dbj|BAJ86890.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 169
Score = 211 bits (536), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 97/129 (75%), Positives = 110/129 (85%)
Query: 196 ATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTA 255
A +F CGQVVDCRICGDPNSV+RFAF+EF D+ GARAAL+L GT+LGFYPVRVLPSKTA
Sbjct: 1 AEVFSNCGQVVDCRICGDPNSVMRFAFIEFADDVGARAALALGGTVLGFYPVRVLPSKTA 60
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I PVNP FLPR+EDE+EM SRT+YCTNIDK V + +K FFE +CGEV RLRLLGDY H+
Sbjct: 61 ILPVNPKFLPRTEDEKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHA 120
Query: 316 TRIAFVEFA 324
T IAFVEF
Sbjct: 121 TCIAFVEFV 129
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E++ RTVY ++ID+ V E+ + F CG+V R+ GD AFVEF + EGA
Sbjct: 75 EKEMVSRTVYCTNIDKNVPEDVVKNFFEGICGEVARLRLLGDYVHATCIAFVEFVEAEGA 134
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G +LG PVRV PSKT + P +P
Sbjct: 135 ILALNCSGMLLGSLPVRVSPSKTPVRPRSP 164
>gi|413952071|gb|AFW84720.1| hypothetical protein ZEAMMB73_482719 [Zea mays]
Length = 625
Score = 210 bits (534), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 93/115 (80%), Positives = 106/115 (92%)
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 247
QVTEE LA LF+ GQVVDC +CGDPNSVL+FAF+EFTDEEGAR AL+L+GT+L +YPV
Sbjct: 308 HQVTEENLAALFINYGQVVDCHMCGDPNSVLQFAFIEFTDEEGARVALNLSGTVLRYYPV 367
Query: 248 RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGE 302
RVLPSKTAIAPVNPTF+PRS+DEREMC+RTIYCTNIDKKVTQ D+KLFFES+CGE
Sbjct: 368 RVLPSKTAIAPVNPTFVPRSDDEREMCARTIYCTNIDKKVTQADLKLFFESICGE 422
>gi|302830029|ref|XP_002946581.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
gi|300268327|gb|EFJ52508.1| hypothetical protein VOLCADRAFT_56092 [Volvox carteri f.
nagariensis]
Length = 238
Score = 207 bits (528), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 96/150 (64%), Positives = 116/150 (77%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E I+RTVY+S +D +TEE LA F CG++VDCRICGDPNS +RFAF+EF D E A
Sbjct: 12 EENIKRTVYISYVDCTLTEENLAAFFSDCGRIVDCRICGDPNSAMRFAFIEFADVEFATK 71
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL G++LG P+RVLPSKTAI PVN +PRS DE E CSRT+Y NIDKKV + D++
Sbjct: 72 ALEKTGSVLGKSPLRVLPSKTAIMPVNQELMPRSPDEVERCSRTVYAANIDKKVDKNDVR 131
Query: 294 LFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
FFES+CG+V R+RLLGDY HSTRIAFVEF
Sbjct: 132 AFFESLCGKVSRIRLLGDYAHSTRIAFVEF 161
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 40/86 (46%), Positives = 54/86 (62%), Gaps = 3/86 (3%)
Query: 174 DEVIR--RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
DEV R RTVY ++ID++V + + F + CG+V R+ GD R AFVEF EG
Sbjct: 107 DEVERCSRTVYAANIDKKVDKNDVRAFFESLCGKVSRIRLLGDYAHSTRIAFVEFQHAEG 166
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
A AAL+ +G +LG P+RV PSKT +
Sbjct: 167 ALAALNCSGALLGSLPIRVSPSKTPV 192
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 1/55 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
E RT+Y + +D +T+ ++ FF S CG + R+ GD + R AF+EFA V
Sbjct: 13 ENIKRTVYISYVDCTLTEENLAAFF-SDCGRIVDCRICGDPNSAMRFAFIEFADV 66
>gi|413943210|gb|AFW75859.1| putative ubiquitin-conjugating enzyme family [Zea mays]
Length = 699
Score = 202 bits (514), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/142 (69%), Positives = 109/142 (76%), Gaps = 20/142 (14%)
Query: 185 DIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGF 244
D+ QVTEE LA LF+ CGQVVDCR+CGDPNSVLRF F+EFTDEEGARAAL+L+GT+L +
Sbjct: 482 DLFCQVTEENLAALFINCGQVVDCRMCGDPNSVLRFTFIEFTDEEGARAALNLSGTVLRY 541
Query: 245 YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
YPV VLPSKT IAPVNPTFLPR VTQ D+KLFFES+CGEV
Sbjct: 542 YPVSVLPSKTVIAPVNPTFLPR--------------------VTQADLKLFFESICGEVF 581
Query: 305 RLRLLGDYQHSTRIAFVEFAMV 326
RLRLLGDY HSTRIAFVEF M+
Sbjct: 582 RLRLLGDYHHSTRIAFVEFVML 603
>gi|307105908|gb|EFN54155.1| hypothetical protein CHLNCDRAFT_13101, partial [Chlorella
variabilis]
Length = 187
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 87/155 (56%), Positives = 117/155 (75%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
S+ + +E +R TVY+SDI VTE QLA F CGQ+VDCR+CGDPNS +RFAF+EF E
Sbjct: 1 SSRRNEEKVRCTVYISDISDTVTEAQLAAFFQDCGQLVDCRVCGDPNSSMRFAFIEFMQE 60
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
+ A+ AL +G MLG +P+RV PSKTAI PVN T+LPRS +ERE+ +RT++ NID+ V
Sbjct: 61 DSAQQALGKSGAMLGDFPIRVSPSKTAIVPVNNTYLPRSTEERELVARTVFVGNIDRVVE 120
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ + FF+++CG V ++RLLGD QHS +IAF+EF
Sbjct: 121 REQLSEFFQNLCGPVSKIRLLGDSQHSAKIAFIEF 155
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 1/88 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDE 228
+ ++ E++ RTV+V +ID+ V EQL+ F CG V R+ GD + AF+EF
Sbjct: 99 STEERELVARTVFVGNIDRVVEREQLSEFFQNLCGPVSKIRLLGDSQHSAKIAFIEFVTA 158
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAI 256
E ARAAL L+G +LG P+RV PSKT +
Sbjct: 159 ESARAALKLSGALLGTLPLRVSPSKTPV 186
>gi|384248219|gb|EIE21704.1| hypothetical protein COCSUDRAFT_56895 [Coccomyxa subellipsoidea
C-169]
Length = 231
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/230 (42%), Positives = 133/230 (57%), Gaps = 39/230 (16%)
Query: 97 KLNPMAAEFVPPSLANGQIFNFNPAFFGPNGF--GYTNNFIMHTDGTANTNGHTTTRRKR 154
+LNP A EFVPP NGF + + D +A + HT R+ R
Sbjct: 5 RLNPGAKEFVPPG----------------NGFQVSWQSYSFQKQDVSAPGSLHTFQRQSR 48
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
R+ VTE LA +F G++VDCR+CGDP
Sbjct: 49 PR---------------------RKAALQKQFGGNVTEAALADVFKHSGKIVDCRVCGDP 87
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
NS +RFAF+EF DEE + A+ L GTMLG +P+RV+PSKTAI PVN +FLPR+++E E C
Sbjct: 88 NSAMRFAFIEFADEEAIQRAIKLNGTMLGKFPIRVMPSKTAIVPVNNSFLPRTQEELERC 147
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+RT+Y NIDKKV + ++++FF+++CG V ++RLL DY H + IAFVEFA
Sbjct: 148 ARTVYIANIDKKVDREEVRVFFQTLCGPVTKIRLLSDYNHVSSIAFVEFA 197
Score = 73.9 bits (180), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 173 QDEVIR--RTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEE 229
Q+E+ R RTVY+++ID++V E++ F T CG V R+ D N V AFVEF D +
Sbjct: 141 QEELERCARTVYIANIDKKVDREEVRVFFQTLCGPVTKIRLLSDYNHVSSIAFVEFADFK 200
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAI 256
AR AL +G +LG P+RV PSK +
Sbjct: 201 SARKALDCSGALLGSLPIRVTPSKAPV 227
>gi|227204205|dbj|BAH56954.1| AT4G10610 [Arabidopsis thaliana]
Length = 206
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/150 (64%), Positives = 112/150 (74%), Gaps = 10/150 (6%)
Query: 80 GESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPN-GFGYTNNFIMHT 138
GESFK +MR+L ++LSKLNPMA EF+PPSL + FN FF N GF NF ++
Sbjct: 59 GESFKR-DMRELHELLSKLNPMAKEFIPPSLTKPVVNGFNGGFFAVNNGFVAAGNFPVNE 117
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
DG+ RRK++ QGKRRMN RTS AQ++E+IRRTVYVSDIDQQVTEEQLA L
Sbjct: 118 DGS--------FRRKKSFGQQGKRRMNPRTSLAQREEIIRRTVYVSDIDQQVTEEQLAGL 169
Query: 199 FLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
F+ GQVVDCRICGDPNSVLRFAF+EFTDE
Sbjct: 170 FIGFGQVVDCRICGDPNSVLRFAFIEFTDE 199
>gi|414884567|tpg|DAA60581.1| TPA: hypothetical protein ZEAMMB73_957971 [Zea mays]
Length = 296
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 117/182 (64%), Gaps = 18/182 (9%)
Query: 132 NNFIMHTDGTANTNGH----TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSD-- 185
N + + DG N H + +N YS G+ ++C VSD
Sbjct: 65 NGYYVAYDGWGNREDHGHHFSIKLILKNVYSAGQMGVSCLGLG------------VSDRY 112
Query: 186 IDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFY 245
+D Q L VVDCR+CGDPNSVLRFAF+EF DEEGARAA +L+ T+LG+Y
Sbjct: 113 LDDQDCILSLVFHLHISPHVVDCRMCGDPNSVLRFAFIEFADEEGARAAPNLSRTVLGYY 172
Query: 246 PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQR 305
PV VLPSKTAIAPVN TFLPRS+DEREMC+ TIYCTNIDKKVTQ D+ LFFES+CGE++
Sbjct: 173 PVNVLPSKTAIAPVNETFLPRSDDEREMCASTIYCTNIDKKVTQADLNLFFESICGELKV 232
Query: 306 LR 307
R
Sbjct: 233 CR 234
>gi|384245723|gb|EIE19216.1| hypothetical protein COCSUDRAFT_38408 [Coccomyxa subellipsoidea
C-169]
Length = 200
Score = 180 bits (456), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 79/143 (55%), Positives = 106/143 (74%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
+ S Q+VTE LA +F G++VDCR+CGDPNS +RFAF+EF DE + A+ L G
Sbjct: 24 WQSPFHQKVTEASLADVFKDSGKIVDCRVCGDPNSAMRFAFIEFADERAVQQAIKLNGAK 83
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCG 301
LG YP+RV+PSKTAI PVN +FLPR++ E E C+RT+Y NIDK+V + D++ FFE++CG
Sbjct: 84 LGKYPIRVMPSKTAIVPVNTSFLPRTQKELECCARTVYVANIDKRVDREDVRQFFETLCG 143
Query: 302 EVQRLRLLGDYQHSTRIAFVEFA 324
V+++RLL DY + IAFVEFA
Sbjct: 144 PVKKIRLLSDYNKVSSIAFVEFA 166
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
++ E RTVYV++ID++V E + F T CG V R+ D N V AFVEF +
Sbjct: 111 KELECCARTVYVANIDKRVDREDVRQFFETLCGPVKKIRLLSDYNKVSSIAFVEFAGFDS 170
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
AR AL +G +LG P+RV PSK +
Sbjct: 171 ARKALDCSGALLGMLPIRVTPSKAPV 196
>gi|413922754|gb|AFW62686.1| hypothetical protein ZEAMMB73_396388 [Zea mays]
Length = 279
Score = 176 bits (446), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/170 (54%), Positives = 114/170 (67%), Gaps = 16/170 (9%)
Query: 170 NAQQDEVIRRTVYVSDIDQQ---VTEEQLATLFLTCGQVVDCRICGDPNSVLR------- 219
+A+ D + R V + Q VTEE L LF+ CGQVVDC +CGDPN VL
Sbjct: 67 SAELDRMSSRCVITCRLYVQGWMVTEENLVALFINCGQVVDCHMCGDPNLVLSLLTLCNG 126
Query: 220 ---FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
+ EGARAAL+L+GT+LG+YPV VLPSKTAIAPVN TFLPRS DE EMC+R
Sbjct: 127 STIYGVKNIDVPEGARAALNLSGTVLGYYPVNVLPSKTAIAPVNETFLPRSNDEHEMCAR 186
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLR---LLGDYQHSTRIAFVEF 323
TIYCTNIDKKVTQ D+KLFFES+CGE++ R + D + + + F++F
Sbjct: 187 TIYCTNIDKKVTQADLKLFFESICGELKVCRNGTIKIDLETNKIMDFIKF 236
>gi|388517685|gb|AFK46904.1| unknown [Lotus japonicus]
Length = 124
Score = 167 bits (422), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 75/95 (78%), Positives = 84/95 (88%)
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
MLG+YP+RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK+TQ D+K FFES+C
Sbjct: 1 MLGYYPLRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKLTQSDVKNFFESIC 60
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWHAC 335
GEVQRLRLLGD+ HSTRIAFVEF + + +C
Sbjct: 61 GEVQRLRLLGDHNHSTRIAFVEFKVAESAIAALSC 95
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 56/90 (62%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD N R AFVEF E A
Sbjct: 30 EREMCSRTIYCTNIDKKLTQSDVKNFFESICGEVQRLRLLGDHNHSTRIAFVEFKVAESA 89
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AALS +G +LG P+RV PSKT + +P
Sbjct: 90 IAALSCSGVILGSLPIRVSPSKTPVRSRSP 119
>gi|414884994|tpg|DAA61008.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 295
Score = 162 bits (411), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 108/162 (66%), Gaps = 2/162 (1%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVE 224
++ +Q DE ++RT++V ID VTE+ LA LF G VVDCRICGDP S LRF FVE
Sbjct: 96 KSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTVVDCRICGDPTSDDGLRFGFVE 155
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
E+ A A+L L G ++ P+ V S+TAI P+NP FLP+SE E E C RTIYCTNI
Sbjct: 156 LQHEDEAIASLDLDGYIISVSPLSVSRSRTAICPINPKFLPQSEAEWETCLRTIYCTNIS 215
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
K VT +++ F E+ G+V R+RLL + + ST IAF+EF V
Sbjct: 216 KNVTSSNLRSFCEAYFGKVCRVRLLDNKERSTNIAFIEFVEV 257
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 7/86 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTC----GQVVDCRICGDPNSVLRFAFVEFTDEEG 230
E RT+Y ++I + VT L + C G+V R+ + AF+EF + G
Sbjct: 203 ETCLRTIYCTNISKNVTSSNLRSF---CEAYFGKVCRVRLLDNKERSTNIAFIEFVEVYG 259
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
A AAL G + P+R+ PSK+ I
Sbjct: 260 AIAALGSGGIYVDGVPIRMCPSKSPI 285
>gi|50726388|dbj|BAD33999.1| RNA-binding protein-like [Oryza sativa Japonica Group]
Length = 316
Score = 161 bits (408), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 94/190 (49%), Positives = 117/190 (61%), Gaps = 23/190 (12%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRR-MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLAT 197
+G ++T H + R RN QG+ + R AQ++E +RRT++VSDID VTE+ LA
Sbjct: 120 NGISSTR-HWSRRGSRNFSRQGRSAPFSSRVRRAQKEEFVRRTIFVSDIDHTVTEDMLAE 178
Query: 198 LFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
LF + C VVDCRICGD +S LRFAF+EF DE A AAL L G +LG P+RV PSKTAI
Sbjct: 179 LFGSYCSVVVDCRICGDHSSGLRFAFIEFQDESDAYAALDLDGYVLGICPLRVSPSKTAI 238
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
PVNP+FLP +V D+K F E G+V RL+LLGD H T
Sbjct: 239 MPVNPSFLP--------------------QVNVTDLKYFCEEHFGQVFRLKLLGDDGHPT 278
Query: 317 RIAFVEFAMV 326
RIAF+EFA V
Sbjct: 279 RIAFIEFAEV 288
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 34/66 (51%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
R + E RTI+ ++ID VT+ + F S C V R+ GD+ R AF+EF
Sbjct: 150 RRAQKEEFVRRTIFVSDIDHTVTEDMLAELFGSYCSVVVDCRICGDHSSGLRFAFIEFQD 209
Query: 326 VSEPFS 331
S+ ++
Sbjct: 210 ESDAYA 215
>gi|116789825|gb|ABK25401.1| unknown [Picea sitchensis]
Length = 124
Score = 161 bits (407), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 71/85 (83%), Positives = 80/85 (94%)
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
MLG+YPVRVLPSKTAI PVNPTFLPRSEDEREMC+RTIYCTNIDKKV+Q ++++FFES+C
Sbjct: 1 MLGYYPVRVLPSKTAILPVNPTFLPRSEDEREMCARTIYCTNIDKKVSQVEVRMFFESLC 60
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAM 325
GEV RLRLLGD+ HSTRIAFVEF M
Sbjct: 61 GEVSRLRLLGDHVHSTRIAFVEFVM 85
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 55/90 (61%), Gaps = 1/90 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RT+Y ++ID++V++ ++ F + CG+V R+ GD R AFVEF E A
Sbjct: 30 EREMCARTIYCTNIDKKVSQVEVRMFFESLCGEVSRLRLLGDHVHSTRIAFVEFVMAESA 89
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
AL+ +G ++G P+RV PSKT + P P
Sbjct: 90 ILALNCSGAIVGSLPIRVSPSKTPVRPRIP 119
>gi|414878000|tpg|DAA55131.1| TPA: hypothetical protein ZEAMMB73_948686 [Zea mays]
Length = 237
Score = 157 bits (397), Expect = 7e-36, Method: Compositional matrix adjust.
Identities = 84/136 (61%), Positives = 95/136 (69%), Gaps = 23/136 (16%)
Query: 171 AQQDEVIRRTVYVSDIDQQ---VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
A+ D + R V + Q VTEE LATLF+ CGQVVDCR+ GDPNSVLRFAFVEFTD
Sbjct: 66 AELDRMSSRCVRTCRLYVQGWMVTEENLATLFINCGQVVDCRMRGDPNSVLRFAFVEFTD 125
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
EEGARAAL+L+GT LG+YPV VLPSKTAIAPVN TFLPR V
Sbjct: 126 EEGARAALNLSGTELGYYPVNVLPSKTAIAPVNETFLPR--------------------V 165
Query: 288 TQGDIKLFFESVCGEV 303
TQ D+KLFFES+CGE+
Sbjct: 166 TQADLKLFFESICGEI 181
>gi|413918321|gb|AFW58253.1| hypothetical protein ZEAMMB73_482713 [Zea mays]
Length = 249
Score = 157 bits (396), Expect = 8e-36, Method: Compositional matrix adjust.
Identities = 88/176 (50%), Positives = 108/176 (61%), Gaps = 41/176 (23%)
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
VTEE LA LF+ C QVVDCR+CGDPNSVLRFAF+EFTDEEGARAAL+L+ T+LG+YPV
Sbjct: 31 MVTEENLAALFINCRQVVDCRMCGDPNSVLRFAFIEFTDEEGARAALNLSRTVLGYYPVN 90
Query: 249 VLPSKTAIAPVNPTFLPR-----------------SEDEREMCSRTI------------- 278
VLPSKTAIAPVN TFLPR +M S+ +
Sbjct: 91 VLPSKTAIAPVNKTFLPRVCKPFGTNMLVLSSWLNVHALYDMVSKKVGRFSVLYSLTMNM 150
Query: 279 YCT--------NIDKKVTQGDIKLFFESVCGEVQRLR---LLGDYQHSTRIAFVEF 323
C NIDKKVTQ D+KLFFES+CGE++ R + D + + + F++F
Sbjct: 151 KCVQGLSTAQINIDKKVTQADLKLFFESICGELKVCRNGTIKIDLETNKIMDFIKF 206
>gi|413921446|gb|AFW61378.1| hypothetical protein ZEAMMB73_448284 [Zea mays]
Length = 206
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 85/167 (50%), Positives = 98/167 (58%), Gaps = 25/167 (14%)
Query: 87 EMRDLVDMLSKLNPMAAEFVPPSLAN------GQIFNFNPAFFGPNGFGY---TNNFIMH 137
EMRDL D+LSKLNPMA EFVPPSLA+ PA P +G+ F +
Sbjct: 39 EMRDLEDLLSKLNPMAEEFVPPSLASPISGAGAGHGALTPAPLSPAAYGFYPVNAGFAVA 98
Query: 138 TDG-------TANTNGHTTTRRKRNGYSQGKRRM---------NCRTSNAQQDEVIRRTV 181
+ G A + H K++G N RTS AQ+DE IRRTV
Sbjct: 99 SPGHRGVVSFPAVADAHAGRGMKKDGAGGFGGHGHGHPGRRRTNSRTSMAQRDEAIRRTV 158
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
YVSDID QVTEE LA LF+ CGQVVDCR+CGDPNSVLRFAF+EFTDE
Sbjct: 159 YVSDIDHQVTEENLAALFINCGQVVDCRMCGDPNSVLRFAFIEFTDE 205
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
E RT+Y ++ID +VT+ ++ F + CG+V R+ GD R AF+EF
Sbjct: 152 EAIRRTVYVSDIDHQVTEENLAALFIN-CGQVVDCRMCGDPNSVLRFAFIEF 202
>gi|242044320|ref|XP_002460031.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
gi|241923408|gb|EER96552.1| hypothetical protein SORBIDRAFT_02g021070 [Sorghum bicolor]
Length = 288
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 96/239 (40%), Positives = 124/239 (51%), Gaps = 26/239 (10%)
Query: 98 LNPMAAEFVPPSLANG--QIFNFNPAFFGPNGFGYTNNFIMHTDGT-ANTNGHTTTRRKR 154
LNP A EF+P G + + + F P +G A N T R R
Sbjct: 16 LNPDAREFLPWWRLGGSRKQLSVDAPEFIPTSWGKAAAAAAARGVVIARPNNSGTGRAAR 75
Query: 155 NGYSQGKRRMNC------RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
S ++ N ++ +Q DE ++RT++V ID VTEE LA +F G VVDC
Sbjct: 76 RPASNSRQDANSPRNAFFKSHRSQWDETVKRTIFVKYIDHTVTEETLACMFRLFGTVVDC 135
Query: 209 RICGDPNSV-LRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
RICG P S LRF FVE E+ A A+L L G+++G V V S+TAI P+NP FLP+S
Sbjct: 136 RICGHPTSGGLRFGFVELRHEDEALASLDLDGSIIGISAVSVSRSRTAICPINPKFLPQS 195
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
E E E C RTIYCT+I K V RL+LL + + ST IAF+EFA V
Sbjct: 196 EAEWETCLRTIYCTSISKIVC----------------RLKLLDNGERSTNIAFIEFAEV 238
>gi|357153308|ref|XP_003576409.1| PREDICTED: uncharacterized protein LOC100831764 [Brachypodium
distachyon]
Length = 294
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 123/252 (48%), Gaps = 47/252 (18%)
Query: 96 SKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRN 155
SKLNP+AAEFVP L G N+ + +A T
Sbjct: 25 SKLNPLAAEFVPRWLRQD---------------GRRNSSAVAPPVSAVTPAPVVVGHPVV 69
Query: 156 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN 215
GK + + +T + + TE+ LA F CG VVDCRIC +P
Sbjct: 70 VSDVGK------------NNAVPKTRPRARRVRNATEKDLADRFRQCGAVVDCRICRNPR 117
Query: 216 SVLRFAFVEFTDE--------------------EGARAALSLAGTMLGFYPVRVLPSKTA 255
S FAF+EF + A AAL L G +G V+V PS+TA
Sbjct: 118 SEFLFAFIEFQYHANFEFHVKQNIKKQMLHPISDDASAALHLKGVTIGDRHVKVAPSRTA 177
Query: 256 IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
I VNP+FL +S+ E+EMCSRT+YCTNI+K VT ++ FF++ G V R+RLLGD H
Sbjct: 178 IMHVNPSFLAQSDGEKEMCSRTVYCTNIEKSVTCAELVGFFQAYFGSVSRVRLLGDDNHV 237
Query: 316 TRIAFVEFAMVS 327
T IAFVEFA VS
Sbjct: 238 TGIAFVEFAEVS 249
Score = 43.9 bits (102), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ E+ RTVY ++I++ VT +L F G V R+ GD N V AFVEF +
Sbjct: 192 EKEMCSRTVYCTNIEKSVTCAELVGFFQAYFGSVSRVRLLGDDNHVTGIAFVEFAEVSAD 251
Query: 232 RAALSLAGTMLGFYPVR 248
AAL G P+R
Sbjct: 252 IAALRSIGIYARGLPIR 268
>gi|290985874|ref|XP_002675650.1| predicted protein [Naegleria gruberi]
gi|284089247|gb|EFC42906.1| predicted protein [Naegleria gruberi]
Length = 422
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/161 (42%), Positives = 99/161 (61%), Gaps = 11/161 (6%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A++D+ I+RT+YV+ ID Q+ E Q+ F CG++V+ R+CGD RFAF EF +E
Sbjct: 80 AEEDDKIKRTIYVTSIDTQILEAQVCEFFSYCGRIVNYRVCGDTQHPTRFAFFEFEQKES 139
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNP--------TFLPRSEDEREMCSRTIYCTN 282
A+AA+SL+G LG Y +R+L S+T I P +F P D+ +RT+Y N
Sbjct: 140 AQAAVSLSGQFLGRYALRILGSRTPIQPTPGAVGNGAVYSFTPAHHDQ---INRTVYVGN 196
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
D +T+ D+K FF++ CG V ++ L GD HS R AFVEF
Sbjct: 197 ADISLTEDDLKEFFDANCGPVTKVVLAGDAVHSARFAFVEF 237
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 66/128 (51%), Gaps = 24/128 (18%)
Query: 219 RFAFVEFTDEEGARAALSLAGT-MLGFY------------PVRVLPSKTAIAP------- 258
++AFVEF+ E A+ A+ L+GT +LG + P V + T I+P
Sbjct: 8 KYAFVEFSSSEEAKVAIELSGTEILGKHLKISLSRSPISNPTPVQSNPTQISPTDDNATK 67
Query: 259 ---VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS 315
++ + L R +E + RTIY T+ID ++ + + FF S CG + R+ GD QH
Sbjct: 68 YQFLSESELKRKAEEDDKIKRTIYVTSIDTQILEAQVCEFF-SYCGRIVNYRVCGDTQHP 126
Query: 316 TRIAFVEF 323
TR AF EF
Sbjct: 127 TRFAFFEF 134
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
A D+ I RTVYV + D +TE+ L F CG V + GD RFAFVEF E
Sbjct: 183 AHHDQ-INRTVYVGNADISLTEDDLKEFFDANCGPVTKVVLAGDAVHSARFAFVEFLHME 241
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAI 256
AL +GT+LG +R+ PS+T I
Sbjct: 242 SRNKALECSGTLLGNRNIRINPSRTPI 268
>gi|414876665|tpg|DAA53796.1| TPA: hypothetical protein ZEAMMB73_994570 [Zea mays]
Length = 266
Score = 132 bits (332), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 69/123 (56%), Positives = 82/123 (66%), Gaps = 16/123 (13%)
Query: 190 VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
VTEE LATLF+ CGQVV+CR+CGDPNSVLRFAF+EFTDE F P
Sbjct: 93 VTEENLATLFINCGQVVECRMCGDPNSVLRFAFIEFTDEVNE-----------TFLPRVC 141
Query: 250 LPSKTAIAPVNP-----TFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
PS T + ++ S+DEREMC+RTIY TNIDKKVTQ D+KLFFES+CGE++
Sbjct: 142 KPSGTNMLVLSSWLNVHALSDMSDDEREMCARTIYYTNIDKKVTQADLKLFFESICGELK 201
Query: 305 RLR 307
R
Sbjct: 202 VCR 204
>gi|414585783|tpg|DAA36354.1| TPA: hypothetical protein ZEAMMB73_057809 [Zea mays]
Length = 217
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 64/109 (58%), Positives = 78/109 (71%), Gaps = 5/109 (4%)
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FAF+EF+DEEGAR AL+L GT+ GFYPVRVLPSKTA+ PVNP FLPR++DE+EM RT+Y
Sbjct: 60 FAFIEFSDEEGARTALNLGGTIFGFYPVRVLPSKTAMLPVNPKFLPRTDDEKEMVMRTVY 119
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSE 328
TNIDK VTQ D+ FFE +CGE Q L Y H + +V +
Sbjct: 120 RTNIDKMVTQLDVNKFFEELCGERQCL-----YDHVCYFILCYWYIVVQ 163
>gi|414884993|tpg|DAA61007.1| TPA: hypothetical protein ZEAMMB73_630517 [Zea mays]
Length = 317
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 78/190 (41%), Positives = 98/190 (51%), Gaps = 46/190 (24%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ---------------------- 204
++ +Q DE ++RT++V ID VTE+ LA LF G
Sbjct: 106 KSHRSQWDETVKRTIFVKYIDHNVTEDILACLFQLFGTSYIVWDRKVNAYISTRWCIFFY 165
Query: 205 ------VVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
VVDCRICGDP S LRF FVE E+ A A+L L G ++ P+ V S+TAI
Sbjct: 166 ITNRYTVVDCRICGDPTSDDGLRFGFVELQHEDEAIASLDLDGYIISVSPLSVSRSRTAI 225
Query: 257 APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHST 316
P+NP FLP+SE E E C RTIYCTNI K V R+RLL + + ST
Sbjct: 226 CPINPKFLPQSEAEWETCLRTIYCTNISKNVC----------------RVRLLDNKERST 269
Query: 317 RIAFVEFAMV 326
IAF+EF V
Sbjct: 270 NIAFIEFVEV 279
>gi|413936264|gb|AFW70815.1| hypothetical protein ZEAMMB73_092717 [Zea mays]
Length = 271
Score = 127 bits (318), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 73/169 (43%), Positives = 99/169 (58%), Gaps = 25/169 (14%)
Query: 132 NNFIMHTDGTAN--TNGHTTTRRK--RNGYSQGKRRMNCRTSNAQ------QDEVIRRTV 181
N + + DG N +GH + + +N Y+ G+R ++C QD ++ V
Sbjct: 35 NGYYVAYDGWGNREEHGHHFSIKLILKNVYNAGQRGISCLGLGVSDRYLDDQDHILS-LV 93
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
+ I VTEE L TLF+ CGQVVDCR+CGDPNSVLRFAF+EF DEEGARAAL+L+GT+
Sbjct: 94 FHLHISPHVTEENLTTLFINCGQVVDCRMCGDPNSVLRFAFIEFADEEGARAALNLSGTV 153
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
LG+YPV VLPSK LP + ++ + C ++ K QG
Sbjct: 154 LGYYPVNVLPSK----------LPLHQSKKH----SYPCLTMNVKCVQG 188
>gi|294460213|gb|ADE75689.1| unknown [Picea sitchensis]
Length = 79
Score = 124 bits (312), Expect = 5e-26, Method: Composition-based stats.
Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 2/77 (2%)
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
MLG+YPVRVLPSKTAIAPVNPTFLPR+E+EREMC+RTIYCTNIDKKV+Q D+K FFE++C
Sbjct: 1 MLGYYPVRVLPSKTAIAPVNPTFLPRTEEEREMCARTIYCTNIDKKVSQSDLKAFFETLC 60
Query: 301 GEVQRL--RLLGDYQHS 315
G + RL Y HS
Sbjct: 61 GFSLEIAWRLSSFYSHS 77
>gi|145353373|ref|XP_001420989.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|145357398|ref|XP_001422906.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144581225|gb|ABO99282.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144583150|gb|ABP01265.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 183
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/151 (42%), Positives = 87/151 (57%), Gaps = 1/151 (0%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGAR 232
++ + TV+V D+ V+E +LA +F +CG+++DCR+CGD N+ +AFV F E
Sbjct: 1 EKAVPYTVFVKDVPASVSERELADVFASCGRIIDCRMCGDANTHKFSYAFVAFECAEAVD 60
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL L T L + V S TA+ PVNP LP++E E E C+RTIY N+DK V +
Sbjct: 61 RALLLDKTPLHGKNIMVKKSDTAVIPVNPLLLPQNEREVESCARTIYVANVDKTVDSHAL 120
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
KL FE G V RL L +AFVEF
Sbjct: 121 KLLFEDRAGPVNRLHLQVKNNAVANVAFVEF 151
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDE 228
N ++ E RT+YV+++D+ V L LF G V + N+V AFVEF D
Sbjct: 95 NEREVESCARTIYVANVDKTVDSHALKLLFEDRAGPVNRLHLQVKNNAVANVAFVEFVDL 154
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAI 256
E AL L G LG +RV SKT +
Sbjct: 155 ESVGTALHLTGEQLGNRMIRVSASKTPL 182
>gi|303278248|ref|XP_003058417.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459577|gb|EEH56872.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 187
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 62/151 (41%), Positives = 85/151 (56%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
V+VS++ V+E LA +F CG+V+DCR CGD +FAFV F AL+L G
Sbjct: 13 VHVSNVSLSVSESALARVFAGCGRVLDCRTCGDCGDKKKFAFVAFETSHEVDQALTLDGF 72
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVC 300
++ +RV SKTA+ PVNP LP SE + E C RT+Y +NID + D+K FE+
Sbjct: 73 VVDGRAIRVTRSKTAVIPVNPGLLPTSEADVERCGRTVYVSNIDPTTSDDDLKRAFEANA 132
Query: 301 GEVQRLRLLGDYQHSTRIAFVEFAMVSEPFS 331
G ++R L + R AF+EF S S
Sbjct: 133 GAIRRAHALSSSRRDARNAFIEFENASSAVS 163
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 42/79 (53%), Gaps = 1/79 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
RTVYVS+ID +++ L F G + R AF+EF + A +AL +
Sbjct: 108 RTVYVSNIDPTTSDDDLKRAFEANAGAIRRAHALSSSRRDARNAFIEFENASSAVSALGM 167
Query: 238 AGTMLGFYPVRVLPSKTAI 256
+G ++G VRV+PSKT +
Sbjct: 168 SGRVIGARKVRVVPSKTPL 186
>gi|413944598|gb|AFW77247.1| hypothetical protein ZEAMMB73_128485 [Zea mays]
Length = 331
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/75 (70%), Positives = 63/75 (84%)
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
+GAR AL+L GT+ GFYPVRVLPSKTAI PVNP FLPR++DE+EM RT+Y TNIDK VT
Sbjct: 135 KGARTALNLGGTIFGFYPVRVLPSKTAILPVNPKFLPRTDDEKEMVMRTVYRTNIDKMVT 194
Query: 289 QGDIKLFFESVCGEV 303
Q D+K FFE +CGE+
Sbjct: 195 QLDVKKFFEELCGEL 209
>gi|224132620|ref|XP_002321367.1| predicted protein [Populus trichocarpa]
gi|222868363|gb|EEF05494.1| predicted protein [Populus trichocarpa]
Length = 74
Score = 115 bits (288), Expect = 3e-23, Method: Composition-based stats.
Identities = 50/59 (84%), Positives = 55/59 (93%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
SEDERE+C+RTIYCTNIDKK+TQ D+KLFFES CGEV RLRLLGDY HSTRIAFVEFA+
Sbjct: 2 SEDEREICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEFAV 60
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 20/54 (37%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLT-CGQVVDCRICGDPNSVLRFAFVEF 225
+ E+ RT+Y ++ID+++T+ + F + CG+V R+ GD + R AFVEF
Sbjct: 5 EREICARTIYCTNIDKKITQADVKLFFESFCGEVHRLRLLGDYHHSTRIAFVEF 58
>gi|308810827|ref|XP_003082722.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
gi|116061191|emb|CAL56579.1| FOG: RRM domain (ISS) [Ostreococcus tauri]
Length = 650
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 75/206 (36%), Positives = 100/206 (48%), Gaps = 5/206 (2%)
Query: 123 FGPNGFGYTNNFIMHTDGTANTNGHTTTRRK-RNGYSQGKRRMNCRTSNAQQDEVIR--- 178
+GPN +G N RR +G G+ + R S + + R
Sbjct: 135 YGPNEMSPPGGLYAGPNGRVGNNMDNQWRRANSDGSGGGRHTYHGRHSVSDERAGGRGSP 194
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-VLRFAFVEFTDEEGARAALSL 237
TV+V +I V+E +LA F CG++VDCR+C D NS +AFV F + + ALSL
Sbjct: 195 NTVFVKEIPASVSERELAETFAACGRIVDCRMCRDANSNKFSYAFVAFETADEVQNALSL 254
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L + V S TA+ PVNP LP++E E E +RTIY N+DK V +K FFE
Sbjct: 255 DKMSLHGKNIVVRRSDTAVIPVNPLLLPQNEAELESTARTIYVANVDKSVDSDALKTFFE 314
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEF 323
G V RL L +AFVEF
Sbjct: 315 RHAGAVNRLHLQVKNAADANVAFVEF 340
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 78/174 (44%), Gaps = 30/174 (17%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD-----CRICGDPNSVLRFAFVE 224
N + E RT+YV+++D+ V + L T F V+ + D N AFVE
Sbjct: 284 NEAELESTARTIYVANVDKSVDSDALKTFFERHAGAVNRLHLQVKNAADAN----VAFVE 339
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM----------- 273
F + E A ++L L G LG VRV SKT + VN R ++R M
Sbjct: 340 FVNLESAASSLRLTGKQLGQRVVRVSASKTPLR-VN----RRMSEQRAMSYYASGTNGDA 394
Query: 274 ----CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y +NI K ++ G ++ F S CG V + LL + + AFVEF
Sbjct: 395 ATPPAPTKVYISNIPKNLSPGTLRAMF-SECGRVTNVELLNNPKSKFPYAFVEF 447
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 22/158 (13%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG- 239
VY+S+I + ++ L +F CG+V + + +P S +AFVEF D E A+ AL+ G
Sbjct: 403 VYISNIPKNLSPGTLRAMFSECGRVTNVELLNNPKSKFPYAFVEFDDAESAKRALNFRGR 462
Query: 240 --------TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
L + R + A+ PV S D+ E RT++ T+ID +
Sbjct: 463 EVQGCAINIELTYNKKRRGAPRLALDPV-------SVDKME---RTVFVTDIDPDLEPSF 512
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEFAMVS 327
++ FE CG V L ++ + +A++EF +S
Sbjct: 513 VRSKFEDECGPVT-LFWYKAFEKGEKQALAYIEFTELS 549
>gi|413954118|gb|AFW86767.1| hypothetical protein ZEAMMB73_327506, partial [Zea mays]
Length = 81
Score = 110 bits (275), Expect = 9e-22, Method: Composition-based stats.
Identities = 49/59 (83%), Positives = 56/59 (94%)
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
EGARAAL+L+GT+LG+YP+ VL SKTAIAPVN TFLPRS+DEREMC+RTIYCTNIDKKV
Sbjct: 14 EGARAALNLSGTVLGYYPINVLLSKTAIAPVNETFLPRSDDEREMCARTIYCTNIDKKV 72
>gi|255079476|ref|XP_002503318.1| predicted protein [Micromonas sp. RCC299]
gi|226518584|gb|ACO64576.1| predicted protein [Micromonas sp. RCC299]
Length = 144
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 81/144 (56%), Gaps = 15/144 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--------------NSVLRFAFVEF 225
TVYV +I +E + F TCG V +CR+ DP N R AFV F
Sbjct: 1 TVYVREIPAGASEADVHDHFYTCGAVRECRVSADPHPPSKTDAGAGPDTNKKTRVAFVAF 60
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
E R AL++ G++L P++V+PS+T + PVNP LPR+E+ERE C+RT+Y +N+D
Sbjct: 61 ETENAVREALTMDGSLLLGEPIQVMPSRTEVMPVNPGLLPRTEEERERCARTVYVSNVDP 120
Query: 286 KVTQGDIKLFFESVC-GEVQRLRL 308
V +++ E++ G++ L L
Sbjct: 121 DVRSNELRSALEAIADGKIAALHL 144
>gi|255638879|gb|ACU19742.1| unknown [Glycine max]
Length = 179
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/167 (46%), Positives = 95/167 (56%), Gaps = 21/167 (12%)
Query: 1 MAVAENAGAKIDSSNQNLDDTVVSSDSNDVQNSNDHSKERSGNGNANIQIQNGQTKPGA- 59
MAV EN GAKI SS+Q+L++ VVS+DS +V+ S + NG N Q Q+ +T PG
Sbjct: 1 MAVVENVGAKIGSSSQSLENGVVSADSGEVEKSKTRGDQDMNNGVFNHQ-QHQETVPGTM 59
Query: 60 ---GAGGGFVNVNASDNH--------MERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPP 108
+ + N +N E GESFK +MRDL ++LSKLNPMA EFVPP
Sbjct: 60 PVPNGNFSYKHANGVNNDGYGMNGVMSEENGGESFK-RDMRDLEELLSKLNPMAEEFVPP 118
Query: 109 SLANGQIFNFNPAFFGPN-GFGYTNNFIMHTDGTANTNGHTTTRRKR 154
SLAN GPN GFGYTNNFI+ + NTNG T RR R
Sbjct: 119 SLANTHGL-----LAGPNAGFGYTNNFILPNN-YGNTNGQTNNRRGR 159
>gi|440801206|gb|ELR22227.1| RNAbinding protein, putative [Acanthamoeba castellanii str. Neff]
Length = 533
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 63/177 (35%), Positives = 90/177 (50%), Gaps = 36/177 (20%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALSLA 238
TVYV+ +D Q+ EE + LF CG V + R+CG+ N RFAFVEF+ E A A+ L
Sbjct: 164 TVYVTGVDTQLREEHVIQLFSLCGTVTNIRMCGETENKATRFAFVEFSTRESALMAMGLT 223
Query: 239 GTMLGFYPVRVLPSKTAI--------------------------APVNPTFLPRSEDERE 272
+LG P++V+PSKTAI A +PT+ +E
Sbjct: 224 NIVLGNAPIKVMPSKTAIQAGSRGGGGGPGGGGGPRPPHHAHAAAAFDPTY-------QE 276
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMVSE 328
SRT+Y +D +++ ++ F S G V +L + GD H R AFVEF+ V+E
Sbjct: 277 RASRTLYVGGVDSNLSEAELLQMF-SGFGTVTKLAMAGDTTVHQARFAFVEFSTVAE 332
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 85/202 (42%), Gaps = 58/202 (28%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
+RTVYV I + E L F TC ++ R+ GDP+ RF F+EF EGA+ A ++
Sbjct: 13 QRTVYVGCIPSNLNSETLGHFFSTCDTIIQIRLAGDPSYSTRFGFIEFATPEGAQRACNM 72
Query: 238 AGTMLGFYPVRVLPSKTAI----------------------------------------- 256
G L +R+ SKTAI
Sbjct: 73 NGVELDGKKLRITLSKTAISSTSSHSGHSAHSAQSDASSAYASAAAGHMGLHAYGAAYGM 132
Query: 257 ------------APVNPTFLP-RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
A + P + P ++R C T+Y T +D ++ + + F S+CG V
Sbjct: 133 GYGAQGGMPYMHAGMPPAYAPAHGSNDRVAC--TVYVTGVDTQLREEHVIQLF-SLCGTV 189
Query: 304 QRLRLLGDYQH-STRIAFVEFA 324
+R+ G+ ++ +TR AFVEF+
Sbjct: 190 TNIRMCGETENKATRFAFVEFS 211
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 46/83 (55%), Gaps = 1/83 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGARA 233
E RT+YV +D ++E +L +F G V + GD RFAFVEF+ A
Sbjct: 276 ERASRTLYVGGVDSNLSEAELLQMFSGFGTVTKLAMAGDTTVHQARFAFVEFSTVAEAHM 335
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL++ GT++G P+RV SKT I
Sbjct: 336 ALAMNGTVVGERPIRVSQSKTPI 358
>gi|290997908|ref|XP_002681523.1| predicted protein [Naegleria gruberi]
gi|284095147|gb|EFC48779.1| predicted protein [Naegleria gruberi]
Length = 408
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC------GDPNSVL--RFAFVEFTDEEG 230
RT+++S ID +E++L F G + + R+C + N+ L +FAF+E+ E
Sbjct: 205 RTIHISGIDSSFSEDELLDYFSVYGDITNYRLCNNDQQSSNSNTQLQTKFAFIEYATTEQ 264
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI-APVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+ A+ + G++ G ++V SKTAI P + + + R++ RTI+ ID K++Q
Sbjct: 265 SLKAIMVNGSLWGKSKLKVSHSKTAIQTPPKKSLIDK--QYRDLVERTIHVGGIDVKLSQ 322
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
+K FFE +CG + R+ + GD + + TR F+EF
Sbjct: 323 DHVKAFFEELCGAIHRIAMAGDTESYETRFCFIEF 357
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 38/62 (61%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RT+++ +I T E L LF GQV + ++ GDP+ RFAFVEF D A+ +LSL
Sbjct: 33 RTIHIGNISSYTTVESLQLLFSKYGQVTNIKLAGDPSYAKRFAFVEFVDHHQAKLSLSLD 92
Query: 239 GT 240
GT
Sbjct: 93 GT 94
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 4/91 (4%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSV-LRFAFVEFTD 227
+ Q +++ RT++V ID +++++ + F CG + + GD S RF F+EF D
Sbjct: 300 DKQYRDLVERTIHVGGIDVKLSQDHVKAFFEELCGAIHRIAMAGDTESYETRFCFIEFED 359
Query: 228 EEGARAALSLAGTMLG--FYPVRVLPSKTAI 256
++ AL L+G + ++V PSK+ I
Sbjct: 360 KQSTLRALRLSGCTIAGSVKQIKVSPSKSPI 390
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
SRTI+ NI T ++L F S G+V ++L GD ++ R AFVEF
Sbjct: 32 SRTIHIGNISSYTTVESLQLLF-SKYGQVTNIKLAGDPSYAKRFAFVEFV 80
>gi|238008810|gb|ACR35440.1| unknown [Zea mays]
Length = 92
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/52 (75%), Positives = 42/52 (80%)
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
M RT+YCTNIDK VTQ D+K FFE +CGEV RLRLLGD HSTRIAFVEF
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFV 52
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 1/84 (1%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
++ RTVY ++ID+ VT+ + F CG+V R+ GD R AFVEF EGA A
Sbjct: 1 MVMRTVYCTNIDKMVTQLDVKKFFEELCGEVSRLRLLGDNVHSTRIAFVEFVHAEGAIMA 60
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAP 258
L+ +G +LG PVRV PSKT + P
Sbjct: 61 LNCSGMILGTLPVRVSPSKTPVKP 84
>gi|413926011|gb|AFW65943.1| hypothetical protein ZEAMMB73_108884 [Zea mays]
Length = 92
Score = 80.9 bits (198), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 37/52 (71%), Positives = 42/52 (80%)
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
M SRT+YCTNIDKKVT+ D+K FF+ CG+V RLRLL D HST IAFVEFA
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFA 52
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
++ RTVY ++ID++VTEE + F CG+V R+ D AFVEF E A A
Sbjct: 1 MVSRTVYCTNIDKKVTEEDVKGFFQQACGKVSRLRLLTDIVHSTCIAFVEFAQAESAIMA 60
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
L+ +G +LG P+RV PSKT + P +P +
Sbjct: 61 LNFSGMVLGSLPIRVSPSKTPVRPRSPRVM 90
>gi|440795967|gb|ELR17076.1| RNA recognition motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 347
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 224
N ++ + +QDE I RT+YV +++ +T EQL F CG + CR+ GD + RFAF+E
Sbjct: 163 NAQSYHEKQDE-IARTIYVGNVNSTITSEQLMQFFAICGPITFCRLAGDESHPSRFAFIE 221
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
F +E A+AA+ L GTML V+V SK I
Sbjct: 222 FATKEAAQAAMMLNGTMLLDRAVKVNHSKNPI 253
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/186 (25%), Positives = 78/186 (41%), Gaps = 42/186 (22%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
TV V++I TE+ L F CG +V + GD + ++AFV F A AAL+L+
Sbjct: 39 TVIVTNISPLATEQDLRDFFANCGNIVQINLLGDGLGISQYAFVRFETMAQANAALTLST 98
Query: 240 TMLGFYPVRV-----------------------------------------LPSKTAIAP 258
+ PV++ +P A+
Sbjct: 99 GAVAGMPVKIVMAASDIPVGGAAAAATAALPTPLALTPGVGAASGLGLLGAIPHSLALLS 158
Query: 259 VNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 318
+P ++++ +RTIY N++ +T + FF ++CG + RL GD H +R
Sbjct: 159 GSPANAQSYHEKQDEIARTIYVGNVNSTITSEQLMQFF-AICGPITFCRLAGDESHPSRF 217
Query: 319 AFVEFA 324
AF+EFA
Sbjct: 218 AFIEFA 223
Score = 37.7 bits (86), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 37/78 (47%), Gaps = 11/78 (14%)
Query: 251 PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG 310
P + PV P F T+ TNI T+ D++ FF + CG + ++ LLG
Sbjct: 23 PGSDGLLPVPPQF----------SVSTVIVTNISPLATEQDLRDFFAN-CGNIVQINLLG 71
Query: 311 DYQHSTRIAFVEFAMVSE 328
D ++ AFV F +++
Sbjct: 72 DGLGISQYAFVRFETMAQ 89
>gi|328769388|gb|EGF79432.1| hypothetical protein BATDEDRAFT_35374 [Batrachochytrium
dendrobatidis JAM81]
Length = 555
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 81/171 (47%), Gaps = 33/171 (19%)
Query: 185 DIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTML 242
++ +Q+TEE L F G +V + C + N +++ + V+F D E A AL L GT+L
Sbjct: 22 NLSKQITEELLCQFFSFIGPIVSISLQPC-EANPLVQESLVQFQDSEDAALALHLTGTVL 80
Query: 243 GFYPVRVLPSKTAI-----------APVNPT--------------FLPRSEDE----REM 273
+ + P I P NPT +P + ++
Sbjct: 81 ADKALFITPPSAKIQSFNSHGYLNIPPPNPTAPGVLVPGSMAGSTIVPYGQTATIAGQDS 140
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RTIY NI ++Q ++ + F S CG+V ++++ GD HSTR AF+EFA
Sbjct: 141 VDRTIYTGNIHSGLSQQEVSMLFSS-CGDVTQVKMAGDATHSTRYAFIEFA 190
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A QD V RT+Y +I +++++++ LF +CG V ++ GD R+AF+EF E
Sbjct: 136 AGQDSV-DRTIYTGNIHSGLSQQEVSMLFSSCGDVTQVKMAGDATHSTRYAFIEFATSES 194
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
A AL+L G M+ ++V SK +I
Sbjct: 195 AAMALNLHGMMVAGRAIKVNRSKHSI 220
>gi|156392403|ref|XP_001636038.1| predicted protein [Nematostella vectensis]
gi|156223137|gb|EDO43975.1| predicted protein [Nematostella vectensis]
Length = 686
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 79/157 (50%), Gaps = 7/157 (4%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
+A + E IRRTV+V+++D ++T E L + F +CG + R+ GD R+A++EF + +
Sbjct: 152 DANKVEEIRRTVFVNNLDPEITAEMLLSFFSSCGDIKYIRMGGDDGKPTRYAYIEFAETQ 211
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+AL +G + G P++V SK A++ P P+ D + C + KV
Sbjct: 212 AIVSALQYSGAIFGGKPIKVTHSKNAVS--KPP--PKHSDRKRACFGVFNGMGVQVKVLH 267
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
+ SVC + ++ L+G H + + ++
Sbjct: 268 A---RWLHSVCHCLYQMVLVGRTGHGRLVVVTDPDLI 301
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/200 (23%), Positives = 84/200 (42%), Gaps = 56/200 (28%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL---RFAFVEFTDEEGARAAL 235
+ + VS++ T EQL LF G+V D ++ + ++ + FV+F D AL
Sbjct: 11 KLIQVSNVAHNATLEQLKVLFSFIGEVEDLKLFPESPAITVQSKVCFVKFVDPSSVPIAL 70
Query: 236 SLAGTM-----LGFYPV------------RVLPSKTAIA----------PVNPTFLPR-- 266
L T+ L PV +++ + +A+A P P +P+
Sbjct: 71 HLTNTVFIDKSLIVVPVSDEPVSEEEKALQLVAASSALALGMGDGGGILP-TPALIPQLM 129
Query: 267 ----------------------SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
++ E RT++ N+D ++T ++ L F S CG+++
Sbjct: 130 SSSGNTIAVPSSVPPPPPLTNVDANKVEEIRRTVFVNNLDPEIT-AEMLLSFFSSCGDIK 188
Query: 305 RLRLLGDYQHSTRIAFVEFA 324
+R+ GD TR A++EFA
Sbjct: 189 YIRMGGDDGKPTRYAYIEFA 208
>gi|413944368|gb|AFW77017.1| hypothetical protein ZEAMMB73_226641 [Zea mays]
Length = 273
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/38 (78%), Positives = 36/38 (94%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
+S+DE EMC+RTIYCTNIDKKVTQ D+KLFFES+CGE+
Sbjct: 178 QSDDECEMCARTIYCTNIDKKVTQADLKLFFESICGEI 215
>gi|414884540|tpg|DAA60554.1| TPA: hypothetical protein ZEAMMB73_865049 [Zea mays]
Length = 401
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/41 (75%), Positives = 37/41 (90%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 307
S+DEREMC+RTIY TNIDKKVTQ D+KLFFES+CGE++ R
Sbjct: 299 SDDEREMCARTIYRTNIDKKVTQADLKLFFESICGELKVCR 339
>gi|340385705|ref|XP_003391349.1| PREDICTED: hypothetical protein LOC100639209, partial [Amphimedon
queenslandica]
Length = 358
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRT+YV ++ + +Q+ F TCG++ R+ GD RFAFVEF + E + AL
Sbjct: 41 IRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQ 100
Query: 237 LAGTMLGFYPVRVLPSKTAI 256
G M G P++V SK AI
Sbjct: 101 YNGAMFGDRPIKVNHSKNAI 120
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 253 KTAIAPVNPTFLPRS----EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
++A APV P+ P + + + RTIY N+ + + FF++ CGE++ +R+
Sbjct: 16 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 74
Query: 309 LGDYQHSTRIAFVEFA 324
GD TR AFVEFA
Sbjct: 75 AGDETQPTRFAFVEFA 90
>gi|340382751|ref|XP_003389881.1| PREDICTED: hypothetical protein LOC100632051 [Amphimedon
queenslandica]
Length = 475
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRT+YV ++ + +Q+ FLTCG++ R+ GD RFAFVEF + E + AL
Sbjct: 174 IRRTIYVGNLSSTLHADQVMNFFLTCGEIKYVRMAGDEMQPTRFAFVEFANPESVQVALQ 233
Query: 237 LAGTMLGFYPVRVLPSKTAI 256
G M G P++V SK AI
Sbjct: 234 YNGAMFGDRPIKVNHSKNAI 253
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 41/76 (53%), Gaps = 5/76 (6%)
Query: 253 KTAIAPVNPTFLPRS----EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
++A APV P+ P + + + RTIY N+ + + FF + CGE++ +R+
Sbjct: 149 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFLT-CGEIKYVRM 207
Query: 309 LGDYQHSTRIAFVEFA 324
GD TR AFVEFA
Sbjct: 208 AGDEMQPTRFAFVEFA 223
>gi|414584705|tpg|DAA35276.1| TPA: hypothetical protein ZEAMMB73_072205 [Zea mays]
Length = 364
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/42 (76%), Positives = 37/42 (88%)
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 307
+S+DEREMC+RTIYCTNIDKKVTQ D KLFFES CGE++ R
Sbjct: 261 QSDDEREMCARTIYCTNIDKKVTQTDPKLFFESKCGELKVCR 302
>gi|384249045|gb|EIE22527.1| hypothetical protein COCSUDRAFT_66269 [Coccomyxa subellipsoidea
C-169]
Length = 303
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 77/146 (52%), Gaps = 13/146 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RT+YV ++ ++V E L LF CG V RI GDP+ R+AF+EFT E ++ A+ L
Sbjct: 6 RTIYVGNVGKEVDENALMALFGHCGTVTQIRIAGDPSYDTRYAFIEFTTPEESQTAMMLD 65
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID-KKVTQGDIKLFFE 297
G M+ +RV ++ P + RS D + RTI+ + ++++ I +F
Sbjct: 66 GMMVFERQIRVNMARGGSGP----GVVRSNDP-DRVQRTIHIGGLPFDELSEESISDYFS 120
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEF 323
++ GEV +R G R A+VEF
Sbjct: 121 NI-GEVNAVRKSG------RFAWVEF 139
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 31/57 (54%), Gaps = 1/57 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSE 328
+ RTIY N+ K+V + + F CG V ++R+ GD + TR AF+EF E
Sbjct: 2 QQSDRTIYVGNVGKEVDENALMALFGH-CGTVTQIRIAGDPSYDTRYAFIEFTTPEE 57
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 7/81 (8%)
Query: 177 IRRTVYVSDID-QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
++RT+++ + +++EE ++ F G+V R G RFA+VEF + A+ A+
Sbjct: 96 VQRTIHIGGLPFDELSEESISDYFSNIGEVNAVRKSG------RFAWVEFNTLQAAQTAM 149
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
SL G LG ++V SKT I
Sbjct: 150 SLDGESLGSGTMKVSASKTPI 170
>gi|340383093|ref|XP_003390052.1| PREDICTED: hypothetical protein LOC100637518 [Amphimedon
queenslandica]
Length = 428
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 46/80 (57%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRT+YV ++ + +Q+ F TCG++ R+ GD RFAFVEF + E + AL
Sbjct: 109 IRRTIYVGNLSSTLHADQVMNFFQTCGEIKYVRMAGDETQPTRFAFVEFANPESVQVALQ 168
Query: 237 LAGTMLGFYPVRVLPSKTAI 256
G M G P++V SK AI
Sbjct: 169 YNGAMFGDRPIKVNHSKNAI 188
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 253 KTAIAPVNPTFLPRS----EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
++A APV P+ P + + + RTIY N+ + + FF++ CGE++ +R+
Sbjct: 84 QSAAAPVLPSMPPITGNVDPSKIDEIRRTIYVGNLSSTLHADQVMNFFQT-CGEIKYVRM 142
Query: 309 LGDYQHSTRIAFVEFA 324
GD TR AFVEFA
Sbjct: 143 AGDETQPTRFAFVEFA 158
>gi|291242201|ref|XP_002740997.1| PREDICTED: splicing factor, arginine/serine-rich 12-like
[Saccoglossus kowalevskii]
Length = 574
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 1/83 (1%)
Query: 175 EVIRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E IRRT+YV ++D Q VT EQL F G+V R+ GD RFAFVEF+D+ A
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFSDQNSVAA 225
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL+ G M G P+++ S AI
Sbjct: 226 ALTYNGVMFGGRPLKINHSNNAI 248
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 30/53 (56%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
E RTIY N+D + + L F S GEV+ +R+ GD TR AFVEF+
Sbjct: 166 EEIRRTIYVGNLDSQTVTAEQLLNFFSQVGEVKYVRMAGDETQPTRFAFVEFS 218
>gi|428166786|gb|EKX35755.1| hypothetical protein GUITHDRAFT_118030 [Guillardia theta CCMP2712]
Length = 254
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 13/95 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLF-LTCGQVVDCRICGD-PNSVLRF-----AFVEFTDEEGAR 232
T+YV +++ +T EQL F CGQV+ R+ GD P + RF AFV+F +E A
Sbjct: 21 TIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPATAFRFDRTRFAFVQFLSKEQAD 80
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
A++L+GT+LG P++ P+K NP PRS
Sbjct: 81 IAMTLSGTILGGLPIKCGPAK------NPIVQPRS 109
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 6/58 (10%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHS------TRIAFVEF 323
E S TIY N++ +T + FF +VCG+V +R+ GD + TR AFV+F
Sbjct: 16 EGASCTIYVGNLNPSITAEQLNQFFSAVCGQVLHVRMAGDDPATAFRFDRTRFAFVQF 73
>gi|198429455|ref|XP_002129672.1| PREDICTED: similar to splicing factor, arginine/serine-rich 12
[Ciona intestinalis]
Length = 373
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 6/92 (6%)
Query: 177 IRRTVYVSDID-QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
I+RT+YV ++D +Q T +QL T F TCG+V R+ GD RFAF+EF E +A+
Sbjct: 118 IKRTIYVGNLDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKIEHVDSAM 177
Query: 236 SLAGTMLGFYPVRVLPS-----KTAIAPVNPT 262
L GT+ G +++ S K A+ PVN T
Sbjct: 178 KLNGTLFGDRALKINHSNNAIVKPAVKPVNDT 209
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 73/164 (44%), Gaps = 18/164 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG---DPNSV-LRFAFVEFTDEEGARAALS 236
+ V++I T EQ+ TLF G V+ + DPN+ + AF+++ D A
Sbjct: 7 IQVTNIAPTATLEQIHTLFDHLGTFVEFELFPRNPDPNNPGTKVAFIKYADPSSVGVAQH 66
Query: 237 LAGTMLGFYPVRVLPSKTAIAP---------VNPTFLPRS-----EDEREMCSRTIYCTN 282
L T+ + +P I P T L ++ + + + RTIY N
Sbjct: 67 LTSTVFIDRALICVPYTDGIIPNETVAMQFATPATALIQAGGVIDQTKLDEIKRTIYVGN 126
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
+D K D + F CGEV+ +R+ GD TR AF+EFA +
Sbjct: 127 LDSKQATADQLMTFFGTCGEVKFVRMAGDETQPTRFAFIEFAKI 170
>gi|326427350|gb|EGD72920.1| hypothetical protein PTSG_04652 [Salpingoeca sp. ATCC 50818]
Length = 976
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 18/156 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARA 233
E +RTV+V ++D V E+ L F CG + D R+ P+ + FA++EF ++
Sbjct: 686 EAAQRTVFVKNLDFAVDEDMLQMFFKDCGAIRDIRLVRKPSGQSKGFAYIEFEEKSSLAF 745
Query: 234 ALSLAGTMLGFYPVRVLP----SKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVT 288
ALS + PV V P SKTA+ P + T F P RT++ +D T
Sbjct: 746 ALSKDRQFMNGRPVLVDPCVDRSKTALRPKHQTGFDP----------RTVFVKRLDHSCT 795
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ D++ FE G V+ +R++ R A+VEF
Sbjct: 796 EQDVRTLFEQY-GAVKEVRMVTTLAGKPRGFAYVEF 830
>gi|443735038|gb|ELU18893.1| hypothetical protein CAPTEDRAFT_226786 [Capitella teleta]
Length = 518
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T ++ DE IRRT++V ++D T EQL F G+V R+ GD RFAFVEFT+
Sbjct: 157 TDPSKVDE-IRRTIFVGNLDSISTPEQLLQFFTQAGEVKYVRMAGDETLPTRFAFVEFTE 215
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAI 256
+ AL L G++ PVRV S AI
Sbjct: 216 QASLLKALVLNGSLFSGRPVRVNHSNVAI 244
>gi|348524300|ref|XP_003449661.1| PREDICTED: hypothetical protein LOC100695937 [Oreochromis
niloticus]
Length = 459
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T EQL F G V R+ GD RFAFVEF ++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQESVARAL 222
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
+L G M G P++V S AI V P L
Sbjct: 223 TLNGVMFGDRPLKVNHSNNAI--VKPPEL 249
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
RT+Y N++ + T + L F G+V+ +R+ GD TR AFVEF
Sbjct: 165 RTVYVGNLNSQTTTAEQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEF 212
>gi|449278700|gb|EMC86491.1| Splicing factor, arginine/serine-rich 12 [Columba livia]
Length = 517
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 44/89 (49%), Gaps = 9/89 (10%)
Query: 242 LGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
LG P L P+ TA+ + P + P DE RT+Y N++ + T D L
Sbjct: 29 LGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTADQLLE 85
Query: 296 FESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
F GEV+ +R+ GD TR AFVEFA
Sbjct: 86 FFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|426246381|ref|XP_004016973.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Ovis aries]
gi|426246383|ref|XP_004016974.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Ovis aries]
Length = 516
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|426384534|ref|XP_004058817.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Gorilla gorilla gorilla]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|395455051|ref|NP_001257421.1| splicing regulatory glutamine/lysine-rich protein 1 isoform c [Homo
sapiens]
Length = 507
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|426384530|ref|XP_004058815.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Gorilla gorilla gorilla]
gi|426384532|ref|XP_004058816.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Gorilla gorilla gorilla]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|21040255|ref|NP_631907.1| splicing regulatory glutamine/lysine-rich protein 1 isoform b [Homo
sapiens]
gi|37537968|sp|Q8WXA9.1|SREK1_HUMAN RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12; AltName: Full=Splicing
regulatory protein 508; Short=SRrp508
gi|18307966|gb|AAL67778.1|AF459094_1 splicing factor, arginine/serine-rich 12 [Homo sapiens]
gi|85662678|gb|AAI12344.1| SFRS12 protein [Homo sapiens]
gi|119571715|gb|EAW51330.1| splicing factor, arginine/serine-rich 12, isoform CRA_c [Homo
sapiens]
gi|127801393|gb|AAH67770.1| Splicing factor, arginine/serine-rich 12 [Homo sapiens]
Length = 508
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|26336164|dbj|BAC31767.1| unnamed protein product [Mus musculus]
Length = 317
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 44 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 103
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 104 AFNGVMFGDRPLKINHSNNAI 124
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 48/97 (49%), Gaps = 9/97 (9%)
Query: 234 ALSLAGTMLGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKV 287
+L ++ + LG P L P+ T + + P + P DE RT+Y N++ +
Sbjct: 1 SLGVSLSSLGAIPAAALDPNITTLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQT 57
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 58 TTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 94
>gi|410948713|ref|XP_003981075.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Felis catus]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|332233720|ref|XP_003266051.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Nomascus leucogenys]
gi|441658625|ref|XP_004091273.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|410948711|ref|XP_003981074.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Felis catus]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|426246385|ref|XP_004016975.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 4 [Ovis aries]
Length = 515
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|114599978|ref|XP_001162417.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 3 [Pan troglodytes]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|441658628|ref|XP_004091274.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Nomascus leucogenys]
Length = 509
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|338718814|ref|XP_003363893.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 2 [Equus caballus]
Length = 512
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|432104582|gb|ELK31194.1| Splicing regulatory glutamine/lysine-rich protein 1 [Myotis
davidii]
Length = 614
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 143 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 202
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 203 AFNGVMFGDRPLKINHSNNAI 223
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 145 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 193
>gi|74140797|dbj|BAC29709.2| unnamed protein product [Mus musculus]
Length = 401
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|67968786|dbj|BAE00750.1| unnamed protein product [Macaca fascicularis]
Length = 510
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|440908499|gb|ELR58509.1| Splicing factor, arginine/serine-rich 12, partial [Bos grunniens
mutus]
Length = 534
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 82 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 141
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 142 AFNGVMFGDRPLKINHSNNAI 162
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 84 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 132
>gi|27369842|ref|NP_766180.1| splicing regulatory glutamine/lysine-rich protein 1 [Mus musculus]
gi|37537951|sp|Q8BZX4.1|SREK1_MOUSE RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=Serine/arginine-rich-splicing regulatory
protein 86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|26329009|dbj|BAC28243.1| unnamed protein product [Mus musculus]
gi|47682645|gb|AAH70460.1| Splicing factor, arginine/serine-rich 12 [Mus musculus]
Length = 494
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AAL T LG P L + V+P+ + DE RT+Y N++ + T D
Sbjct: 38 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|39645085|gb|AAH63761.1| Sfrs12 protein, partial [Mus musculus]
Length = 407
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|9910564|ref|NP_064477.1| splicing regulatory glutamine/lysine-rich protein 1 [Rattus
norvegicus]
gi|37537914|sp|Q9JKL7.1|SREK1_RAT RecName: Full=Splicing regulatory glutamine/lysine-rich protein 1;
AltName: Full=SR-related protein of 86 kDa; AltName:
Full=Serine/arginine-rich-splicing regulatory protein
86; Short=SRrp86; AltName: Full=Splicing factor,
arginine/serine-rich 12
gi|7158880|gb|AAF37578.1|AF234765_1 serine-arginine-rich splicing regulatory protein SRRP86 [Rattus
norvegicus]
Length = 494
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AAL T LG P L + V+P+ + DE RT+Y N++ + T D
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|26333193|dbj|BAC30314.1| unnamed protein product [Mus musculus]
Length = 318
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 69 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|149059244|gb|EDM10251.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Rattus
norvegicus]
Length = 494
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 67 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 126
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 127 AFNGVMFGDRPLKINHSNNAI 147
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AAL T LG P L + V+P+ + DE RT+Y N++ + T D
Sbjct: 38 AALDPNITALGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 85
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 86 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 117
>gi|260821314|ref|XP_002605978.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
gi|229291315|gb|EEN61988.1| hypothetical protein BRAFLDRAFT_126567 [Branchiostoma floridae]
Length = 645
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 44/81 (54%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV ++D VT EQL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 206 IRRTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFADQTSVAKAL 265
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
G M G P+++ S AI
Sbjct: 266 QYNGIMFGNRPLKINHSNNAI 286
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N+D + L F GEV+ +R+ GD TR AFVEFA
Sbjct: 208 RTVYVGNLDSATVTAEQLLNFFQQVGEVKYVRMAGDETQPTRFAFVEFA 256
>gi|410929297|ref|XP_003978036.1| PREDICTED: uncharacterized protein LOC101067881 [Takifugu rubripes]
Length = 451
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 3/100 (3%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF+++E AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFSEQESVARAL 222
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 275
+ G M G P+++ S AI V P L +E+ S
Sbjct: 223 TFNGVMFGDRPLKINHSNNAI--VKPPELTPQAAAKELES 260
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F G V+ +R+ GD TR AFVEF+
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFRQVGSVKFVRMAGDETQPTRFAFVEFS 213
>gi|449514352|ref|XP_004177208.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1 [Taeniopygia guttata]
Length = 633
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEF----------- 225
+ V+++ VT EQ+ TLF G + + R+ N+ L F+ +++F
Sbjct: 21 IQVTNLSSAVTSEQMRTLFGFLGDIEELRLYPPDNAPLAFSSKVCYIKFREASSVGVAQH 80
Query: 226 ---------------------TDEEGARAALSLAGTM----------------------- 241
DE A + L+ A TM
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTMTSLMPGAGLLPIPTPTPLTTLGV 140
Query: 242 ----LGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
LG P L P+ TA+ + P + P DE RT+Y N++ + T D
Sbjct: 141 SLGTLGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|405961668|gb|EKC27433.1| Putative splicing factor, arginine/serine-rich 7 [Crassostrea
gigas]
Length = 449
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 57/125 (45%)
Query: 125 PNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVS 184
P + +N I GT T TT K + ++ + E IRRTVYV
Sbjct: 110 PGTPSWPSNVISQMTGTGLTQMITTHDPKLTALGLLQYPPLPGNTDPAKIEEIRRTVYVG 169
Query: 185 DIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGF 244
++ + VT EQL + F G+V R+ GD + A+VEFTD+ AL+ G M
Sbjct: 170 NLAKNVTTEQLLSFFSQVGEVKYVRMAGDEKQPTKNAYVEFTDQRSISTALTYNGVMFQT 229
Query: 245 YPVRV 249
P+ V
Sbjct: 230 LPISV 234
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 47/209 (22%), Positives = 88/209 (42%), Gaps = 60/209 (28%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDE 228
+++ + + +++I T++Q+ TLF G++ +C++ + ++ + +V++ D
Sbjct: 3 EKITTKVIQITNIAPNATKDQMKTLFGYLGRIDECKMYPSNELPEGDTSTKVCYVKYDDS 62
Query: 229 EGARAALSLAGTM-----LGFYPV------------RVLPSKTA-IAPVNPTF------- 263
+ AL L T+ L PV ++ PS A + P P++
Sbjct: 63 VSSGIALHLTNTVFIDRALIIVPVMDGKIPDETTALQIAPSAIAGMIPGTPSWPSNVISQ 122
Query: 264 ---------------------------LPRSED--EREMCSRTIYCTNIDKKVTQGDIKL 294
LP + D + E RT+Y N+ K VT +
Sbjct: 123 MTGTGLTQMITTHDPKLTALGLLQYPPLPGNTDPAKIEEIRRTVYVGNLAKNVTTEQLLS 182
Query: 295 FFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
FF V GEV+ +R+ GD + T+ A+VEF
Sbjct: 183 FFSQV-GEVKYVRMAGDEKQPTKNAYVEF 210
>gi|403267427|ref|XP_003925834.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Saimiri boliviensis boliviensis]
Length = 630
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|355691354|gb|EHH26539.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
mulatta]
gi|355749961|gb|EHH54299.1| Serine/arginine-rich-splicing regulatory protein 86 [Macaca
fascicularis]
Length = 620
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 207 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 266
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 267 AFNGVMFGDRPLKINHSNNAI 287
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 209 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 257
>gi|395825410|ref|XP_003785928.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Otolemur garnettii]
Length = 617
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTM----------------------- 241
E A + L+ A TM
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 242 ----LGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
LG P L P+ T + + P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNITTLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|395510384|ref|XP_003759457.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Sarcophilus harrisii]
Length = 596
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 222
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 223 AFNGVMFGDRPLKINHSNNAI 243
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 17/100 (17%)
Query: 235 LSLAGTMLGFYPVRVL----------PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
LS++ + LG P L P + V+P+ + DE RT+Y N++
Sbjct: 121 LSVSLSSLGAIPAAALDPNLATLGEIPQPPLMGNVDPSKI----DE---IRRTVYVGNLN 173
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+ T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 174 SQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 213
>gi|444510679|gb|ELV09695.1| Splicing regulatory glutamine/lysine-rich protein 1 [Tupaia
chinensis]
Length = 592
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 145 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 204
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 205 AFNGVMFGDRPLKINHSNNAI 225
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 47/96 (48%), Gaps = 9/96 (9%)
Query: 235 LSLAGTMLGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKVT 288
L ++ + LG P L P+ T + + P + P DE RT+Y N++ + T
Sbjct: 103 LGVSLSSLGAIPAAALDPNITTLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTT 159
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 160 TADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 195
>gi|344272595|ref|XP_003408117.1| PREDICTED: LOW QUALITY PROTEIN: splicing regulatory
glutamine/lysine-rich protein 1-like [Loxodonta
africana]
Length = 630
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|301767860|ref|XP_002919343.1| PREDICTED: hypothetical protein LOC100466086 [Ailuropoda
melanoleuca]
gi|281341776|gb|EFB17360.1| hypothetical protein PANDA_007970 [Ailuropoda melanoleuca]
Length = 628
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|148686563|gb|EDL18510.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Mus
musculus]
Length = 519
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 12/92 (13%)
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AAL T LG P L + V+P+ + DE RT+Y N++ + T D
Sbjct: 63 AALDPNITTLGEIPQPPL-----MGNVDPSKI----DE---IRRTVYVGNLNSQTTTADQ 110
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 111 LLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 142
>gi|296194448|ref|XP_002744950.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Callithrix jacchus]
Length = 630
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|426246379|ref|XP_004016972.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Ovis aries]
Length = 632
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|57525681|ref|NP_001003613.1| splicing regulatory glutamine/lysine-rich protein 1 [Danio rerio]
gi|50417233|gb|AAH78219.1| Zgc:100974 [Danio rerio]
Length = 512
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 177 IRRTVYVSDIDQQ-VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF D++ AL
Sbjct: 166 IRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFVRMAGDETQPTRFAFVEFADQDSVARAL 225
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
+ G M G P+++ S AI V P L
Sbjct: 226 TYNGVMFGDRPLKINHSNNAI--VKPPEL 252
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 247 VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
V L + +A P+ P DE RT+Y N++ + T D L F G+V+ +
Sbjct: 142 VATLSAVSAQPPLMGNVDPSKVDE---IRRTVYVGNLNSQSTTADQLLKFFKQVGDVKFV 198
Query: 307 RLLGDYQHSTRIAFVEFA 324
R+ GD TR AFVEFA
Sbjct: 199 RMAGDETQPTRFAFVEFA 216
>gi|119571716|gb|EAW51331.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Homo
sapiens]
Length = 623
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|426384528|ref|XP_004058814.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Gorilla gorilla gorilla]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|332233718|ref|XP_003266050.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Nomascus leucogenys]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|116089325|ref|NP_001070667.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a [Homo
sapiens]
gi|119571714|gb|EAW51329.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Homo
sapiens]
Length = 624
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|329663695|ref|NP_001193066.1| splicing regulatory glutamine/lysine-rich protein 1 [Bos taurus]
Length = 632
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEEAKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|345794152|ref|XP_544361.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Canis lupus familiaris]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|431907792|gb|ELK11399.1| Splicing factor, arginine/serine-rich 12 [Pteropus alecto]
Length = 630
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|397470471|ref|XP_003806845.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Pan paniscus]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|402871715|ref|XP_003899799.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Papio anubis]
gi|387541364|gb|AFJ71309.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a
[Macaca mulatta]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|351713063|gb|EHB15982.1| Splicing factor, arginine/serine-rich 12 [Heterocephalus glaber]
Length = 535
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|410300176|gb|JAA28688.1| splicing regulatory glutamine/lysine-rich protein 1 [Pan
troglodytes]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|354474059|ref|XP_003499249.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cricetulus griseus]
gi|344246968|gb|EGW03072.1| Splicing factor, arginine/serine-rich 12 [Cricetulus griseus]
Length = 611
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 233
>gi|126317239|ref|XP_001381458.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Monodelphis domestica]
Length = 613
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFTFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLSV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNLATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|410948709|ref|XP_003981073.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Felis catus]
Length = 626
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFVGEIEELRLYPPDNTPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|194223833|ref|XP_001492097.2| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
isoform 1 [Equus caballus]
Length = 628
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEF----------- 225
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRAPSSVGVAQH 80
Query: 226 ---------------------TDEEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
+E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|363744206|ref|XP_424756.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1
[Gallus gallus]
Length = 621
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEF----------- 225
+ V+++ VT EQ+ TLF G + + R+ N+ L F+ +++F
Sbjct: 21 IQVTNLSSAVTSEQMRTLFGFLGDIEELRLYPPDNAPLAFSSKVCYIKFREASSVGVAQH 80
Query: 226 ---------------------TDEEGARAALSLAGTM----------------------- 241
DE A + L+ A TM
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTMTSLMPGAGLLPIPTPTPLTTLGV 140
Query: 242 ----LGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
LG P L P+ TA+ + P + P DE RT+Y N++ + T D
Sbjct: 141 SLGTLGAIPAAALDPNITALGEIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|50949479|emb|CAH10414.1| hypothetical protein [Homo sapiens]
Length = 331
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 64 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 123
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 124 AFNGVMFGDRPLKINHSNNAI 144
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 66 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 114
>gi|291395458|ref|XP_002714054.1| PREDICTED: splicing factor, arginine/serine-rich 12 [Oryctolagus
cuniculus]
Length = 618
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 80/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNTPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTM----------------------- 241
E A + L+ A TM
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 242 ----LGFYPVRVL-PSKTAIAPV-NPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
LG P L P+ A+ + P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIAALGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|301609359|ref|XP_002934235.1| PREDICTED: hypothetical protein LOC100329115 [Xenopus (Silurana)
tropicalis]
Length = 566
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRT+YV +++ Q T EQL F G V R+ GD RFAFVEF+D+ AL
Sbjct: 200 IRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRFAFVEFSDQNSVTRAL 259
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 260 TFNGVMFGDRPLKINHSNNAI 280
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 53/126 (42%), Gaps = 24/126 (19%)
Query: 216 SVLRFAFVEFTDEEGARAALSLAGTMLGF-YPVRVLPSKTAIAPVNPTFLPR-------- 266
SVLR VE LS+ T LG P + P T +APV P P
Sbjct: 132 SVLRREKVEV-------PLLSVPLTSLGVNLPTPLEPVITTLAPVLPALTPAIPAVADLP 184
Query: 267 --------SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 318
+ + RTIY N++ + T + L F G+V+ +R+ GD TR
Sbjct: 185 QPPLMGNVDPTKVDEIRRTIYVGNLNSQTTTAEQLLEFFKQVGDVRFVRMAGDETQPTRF 244
Query: 319 AFVEFA 324
AFVEF+
Sbjct: 245 AFVEFS 250
>gi|348553835|ref|XP_003462731.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Cavia porcellus]
Length = 556
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|148686566|gb|EDL18513.1| splicing factor, arginine/serine-rich 12, isoform CRA_d [Mus
musculus]
Length = 626
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 199 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 258
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 259 AFNGVMFGDRPLKINHSNNAI 279
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 201 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 249
>gi|149059243|gb|EDM10250.1| splicing factor, arginine/serine-rich 12, isoform CRA_a [Rattus
norvegicus]
Length = 610
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 45.8 bits (107), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 233
>gi|401423147|ref|XP_003876060.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492301|emb|CBZ27575.1| putative poly(A)-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 544
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 89/204 (43%), Gaps = 28/204 (13%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G++ R + +D + R++ V+
Sbjct: 52 GYGYVN-FQTPADAEKVIDALNYT-----GITPGRQ---IRVMFSIRDPIQRKSGMNNVF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D V ++L F CG+V+ C++ D + + FV+F +GA+AAL + G+
Sbjct: 103 VKKLDTAVNAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETADGAKAALEMDGSK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFFESV 299
LG V V P FL R + E R IY N+ V + D+K E+
Sbjct: 163 LGDCEVVVAP-----------FLRRVDREVMAAKSFRNIYIKNLKATVAEADVKTTVETF 211
Query: 300 CGEVQRLRLLGDYQHSTRIAFVEF 323
G+V L L T+ A V F
Sbjct: 212 -GKVNSLFLSEHAPFPTKFALVAF 234
Score = 44.3 bits (103), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 236
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDRLREIFAPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 237 LAGTML 242
L G L
Sbjct: 349 LNGHSL 354
>gi|74217177|dbj|BAC34905.2| unnamed protein product [Mus musculus]
Length = 513
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 183 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 242
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 243 AFNGVMFGDRPLKINHSNNAI 263
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 185 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 233
>gi|193787205|dbj|BAG52411.1| unnamed protein product [Homo sapiens]
Length = 514
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|398016302|ref|XP_003861339.1| poly(A)-binding protein, putative [Leishmania donovani]
gi|322499565|emb|CBZ34638.1| poly(A)-binding protein, putative [Leishmania donovani]
Length = 544
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G++ R + +D + R++ V+
Sbjct: 52 GYGYVN-FQTTADAEKVIDALNYT-----GIAPGRQ---IRVMFSIRDPLQRKSGMNNVF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D + ++L F CG+V+ C++ D + + FV+F EGA+AAL + G+
Sbjct: 103 VKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLFFES 298
LG S+ +AP R D M + R IY NI T+ D+K E
Sbjct: 163 LG-------DSEVVVAP-----FVRRVDREVMAAKSFRNIYIKNIAAAATEADVKAAAEK 210
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEF 323
G+V L L T+ A V F
Sbjct: 211 F-GKVNSLFLSEHAPFPTKFALVAF 234
Score = 44.3 bits (103), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 236
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 237 LAGTML 242
L G L
Sbjct: 349 LNGQPL 354
>gi|297294417|ref|XP_001087835.2| PREDICTED: hypothetical protein LOC697731 isoform 1 [Macaca
mulatta]
Length = 516
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|146088402|ref|XP_001466041.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
gi|134070143|emb|CAM68476.1| putative poly(A)-binding protein 3 [Leishmania infantum JPCM5]
Length = 544
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 88/205 (42%), Gaps = 30/205 (14%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G + R + +D + R++ V+
Sbjct: 52 GYGYVN-FQTTADAEKVIDALNYT-----GIAPG---LQIRVMFSIRDPLQRKSGMNNVF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D + ++L F CG+V+ C++ D + + FV+F EGA+AAL + G+
Sbjct: 103 VKKLDTAINAKELQAAFTKCGRVLSCKVALDSAGNSKGYGFVQFETAEGAKAALDMNGSK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLFFES 298
LG S+ +AP R D M + R IY NI T+ D+K E
Sbjct: 163 LG-------DSEVVVAP-----FVRRVDREVMAAKSFRNIYIKNIAAAATEADVKAAAEK 210
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEF 323
G+V L L T+ A V F
Sbjct: 211 F-GKVNSLFLSEHAPFPTKFALVAF 234
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 236
R +YV + +T+++L +F G++ C I +PN + FAFV F D + A AAL S
Sbjct: 289 RNLYVKHLPDDITDDKLREIFEPFGKITSCAIMKEPNGTFKGFAFVCFEDRQHASAALRS 348
Query: 237 LAGTML 242
L G L
Sbjct: 349 LNGQPL 354
>gi|193704514|ref|XP_001944340.1| PREDICTED: hypothetical protein LOC100161931 [Acyrthosiphon pisum]
Length = 673
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 51/90 (56%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T ++++ E IRRT+ ++D+ VT+++L F G V R C N + R+A VE+++
Sbjct: 164 TYDSRRIEEIRRTLAAINVDENVTDDELIGFFQKAGDVKYVRWCSRENDITRYALVEYSE 223
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIA 257
+ A L L G LG PV+V + AIA
Sbjct: 224 QASVIAGLKLNGVQLGSRPVQVTHATQAIA 253
>gi|350594366|ref|XP_003134051.3| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1,
partial [Sus scrofa]
Length = 587
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 218 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 277
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 278 AFNGVMFGDRPLKINHSNNAI 298
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 220 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 268
>gi|157870420|ref|XP_001683760.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
gi|68126827|emb|CAJ04400.1| poly(A)-binding protein 3 [Leishmania major strain Friedlin]
Length = 544
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/205 (26%), Positives = 89/205 (43%), Gaps = 30/205 (14%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G++ R + +D + R++ V+
Sbjct: 52 GYGYVN-FQTTADAEKVIDALNYT-----GIAPGRQ---IRVMFSIRDPLQRKSGMNNVF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D + ++L F CG+V+ C++ D + + FV+F +G +AAL + G+
Sbjct: 103 VKKLDTAINAKELQAAFSKCGRVLSCKVALDSAGNSKGYGFVQFETADGTKAALEMNGSK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLFFES 298
LG S+ +AP R D M + R IY NI T+ D+K E
Sbjct: 163 LG-------DSEVVVAP-----FVRRVDREAMAAKSFRNIYIKNITASATEADVKAIVEE 210
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEF 323
G+V L L + T+ A V F
Sbjct: 211 F-GKVDSLFLSEHARFPTKFALVAF 234
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-S 236
R +Y+ + +T+++L +F G++ C I +PN L+ FAFV F D++ A AAL S
Sbjct: 289 RNLYIKHLPDDITDDRLREIFEPFGKITSCAIMKEPNGTLKGFAFVCFEDKQHASAALRS 348
Query: 237 LAGTML 242
L G L
Sbjct: 349 LNGHPL 354
>gi|28703790|gb|AAH47322.1| Similar to expressed sequence AI450757, partial [Homo sapiens]
Length = 386
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|380792715|gb|AFE68233.1| splicing regulatory glutamine/lysine-rich protein 1 isoform a,
partial [Macaca mulatta]
Length = 394
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 180 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 239
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 240 AFNGVMFGDRPLKINHSNNAI 260
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 54/213 (25%), Positives = 79/213 (37%), Gaps = 72/213 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEFTD--------- 227
+ V+++ VT EQ+ TLF G++ + R+ N+ L F+ +V+F D
Sbjct: 21 IQVTNLSSAVTSEQMRTLFSFLGEIEELRLYPPDNAPLAFSSKVCYVKFRDPSSVGVAQH 80
Query: 228 -----------------------EEGARAALSLAGTMLGFYP-VRVLPSKT--------- 254
E A + L+ A TM P +LP T
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPEESKALSLLAPAPTMTSLMPGAGLLPIPTPNPLTTLGV 140
Query: 255 -----------AIAP--------VNPTFL----PRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ P P + P DE RT+Y N++ + T D
Sbjct: 141 SLSSLGAIPAAALDPNIATLGEIPQPPLMGNVDPSKIDE---IRRTVYVGNLNSQTTTAD 197
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 QLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 230
>gi|327263062|ref|XP_003216340.1| PREDICTED: splicing regulatory glutamine/lysine-rich protein 1-like
[Anolis carolinensis]
Length = 626
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 179 IRRTVYVGNLNSQTTTADQLLEFFKPVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 238
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
+ G + G P+++ S AI V P L
Sbjct: 239 AFNGVVFGDRPLKINHSNNAI--VKPPEL 265
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 50/212 (23%), Positives = 78/212 (36%), Gaps = 71/212 (33%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA----FVEF----------- 225
+ V+++ VT EQ+ TLF G + + R+ N+ L F+ +++F
Sbjct: 21 IQVTNLSSAVTSEQMRTLFGFLGDIEELRLYPPDNAPLAFSSKVCYIKFRESSSVGVAQH 80
Query: 226 ---------------------TDEEGARAALSLAGTML------GFYPVRVLPSKTAIAP 258
DE A + L+ A T+ G P+ P + P
Sbjct: 81 LTNTVFIDRALIVVPCAEGKIPDEAKALSLLAPAPTITSLIPGGGLLPIPTPPVSSIGIP 140
Query: 259 VN----------------------PTFL----PRSEDEREMCSRTIYCTNIDKKVTQGDI 292
++ P + P DE RT+Y N++ + T D
Sbjct: 141 LSSLGAIPAAALDHNITAIGDIPQPPIMGNVDPSKIDE---IRRTVYVGNLNSQTTTADQ 197
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
L F GEV+ +R+ GD TR AFVEFA
Sbjct: 198 LLEFFKPVGEVKFVRMAGDETQPTRFAFVEFA 229
>gi|296475869|tpg|DAA17984.1| TPA: splicing factor, arginine/serine-rich 12-like [Bos taurus]
Length = 325
Score = 60.1 bits (144), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 132 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 191
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 192 AFNGVMFGDRPLKINHSNNAI 212
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 134 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 182
>gi|432884719|ref|XP_004074556.1| PREDICTED: uncharacterized protein LOC101155617 [Oryzias latipes]
Length = 445
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 52/100 (52%), Gaps = 3/100 (3%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G V R+ GD RFAFVEF +++ AL
Sbjct: 163 IRRTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEFVEQDSVARAL 222
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 275
+ G M G P++V S AI V P L +E+ S
Sbjct: 223 TFNGVMFGDRPLKVNHSNNAI--VKPPELTPQAAAKELES 260
Score = 42.4 bits (98), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
RT+Y N++ + T D L F G+V+ +R+ GD TR AFVEF
Sbjct: 165 RTVYVGNLNSQTTTADQLLEFFKQVGDVKFVRMAGDETQPTRFAFVEF 212
>gi|358055852|dbj|GAA98197.1| hypothetical protein E5Q_04880 [Mixia osmundae IAM 14324]
Length = 545
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 7/154 (4%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
+ V+V + +T E L F +CG++V R+ D + F +V+F D GA+AAL
Sbjct: 288 KNVFVGGLSWGITNESLQEAFESCGEIVSARVVTDRETGKSRGFGYVDFVDAAGAKAALE 347
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE--DEREMCSRTIYCTNIDKKVTQGDIKL 294
+AGT L + V S P P+ + DE S+T++ N+ + TQ +
Sbjct: 348 MAGTELDGRTINVDLSAPRPPRDGPGATPKKQFNDELSAPSQTVFVGNLSFESTQDAVWE 407
Query: 295 FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMV 326
F S G V +R+ D + A+VEF V
Sbjct: 408 SF-SDFGGVNSVRVPTDMETGRPKGFAYVEFGDV 440
>gi|148686564|gb|EDL18511.1| splicing factor, arginine/serine-rich 12, isoform CRA_b [Mus
musculus]
Length = 223
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 45/81 (55%), Gaps = 1/81 (1%)
Query: 177 IRRTVYVSDIDQQVT-EEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
IRRTVYV +++ Q T +QL F G+V R+ GD RFAFVEF D+ AL
Sbjct: 92 IRRTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFADQNSVPRAL 151
Query: 236 SLAGTMLGFYPVRVLPSKTAI 256
+ G M G P+++ S AI
Sbjct: 152 AFNGVMFGDRPLKINHSNNAI 172
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
RT+Y N++ + T D L F GEV+ +R+ GD TR AFVEFA
Sbjct: 94 RTVYVGNLNSQTTTADQLLEFFKQVGEVKFVRMAGDETQPTRFAFVEFA 142
>gi|326517609|dbj|BAK03723.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 990
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 9/97 (9%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
+ A++ E +++ V +S++ +T E + LF CG+VVDC I A+VE++
Sbjct: 355 TEAEKAEALKKIVQISNLSPVLTVENIKQLFGYCGKVVDCTIT----ESKHIAYVEYSKP 410
Query: 229 EGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
E A AAL+L+ +G P+ V LP KT+IA N
Sbjct: 411 EEATAALALSNVDVGGRPLNVEMAKSLPQKTSIANSN 447
>gi|303280195|ref|XP_003059390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459226|gb|EEH56522.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 589
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+ RTVY +++ +TE+ LA F G V + G + RF FVEFTD+ A AA +
Sbjct: 294 VARTVYAGNVNSSITEDMLADFFSVAGVVTYVKFAGSDFNPSRFGFVEFTDKASAEAAKA 353
Query: 237 LAGTMLGFYPVRV 249
L+GTML ++V
Sbjct: 354 LSGTMLAEMTLKV 366
>gi|115620271|ref|XP_781643.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Strongylocentrotus purpuratus]
Length = 890
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 76/148 (51%), Gaps = 7/148 (4%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAF 222
MN + ++D RTV+V ++ VTE+++ +F CG V D R+ + + + +
Sbjct: 603 MNPKKKKPERDNNDPRTVFVKNLGYNVTEKRIRKVFSECGTVRDVRMVTNYQKKFKGYCY 662
Query: 223 VEFTDEEGARAALSLAGTMLGFYPVRVLPSK-TAIAPVNPTFLPRSEDEREMCSRTIYCT 281
VEF DEE A+ AL + P+ V PSK + AP FL E +M ++ +
Sbjct: 663 VEFEDEESAKKALKKDRETINDRPMYVDPSKDRSGAPAEKKFL----YENKMEKNKLFVS 718
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLL 309
+ + +T +++ F S G+++ +R++
Sbjct: 719 GLPRTLTTEELEKTF-SKFGKLKGVRIV 745
>gi|449487626|ref|XP_004157720.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101203535
[Cucumis sativus]
Length = 936
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+ ++RT+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFXFCGTVVECTITDSKH----FAYIEYSKPEEATAA 389
Query: 235 LSLAGTMLGFYPVRV-----LPSKTAIAPVNPTF 263
L+L +G P+ V LP K A A NP+
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSL 421
>gi|940288|gb|AAA74208.1| protein localized in the nucleoli of pea nuclei; ORF; putative
[Pisum sativum]
Length = 611
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 74/154 (48%), Gaps = 14/154 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V + + F CG+VVD R+ D + + F VEF E A++AL L
Sbjct: 355 KTLFVGNLSFSVQRSDIESFFQECGEVVDVRLASDEDGRFKGFGHVEFATAEAAQSALEL 414
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS---EDEREMCSRTIYCTNIDKKVTQGDIKL 294
G L VR+ +A F P S ++ S+T++ DK + + +I+
Sbjct: 415 NGQELLQRGVRL-----DLARERGAFTPNSTGNQNSGRGQSQTVFVRGFDKSLGEDEIRA 469
Query: 295 FFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
E + CG+ R+ + DY +S A+++F
Sbjct: 470 KLEQHFASCGQASRVSIPKDYDTGYSKGFAYMDF 503
>gi|449433175|ref|XP_004134373.1| PREDICTED: uncharacterized protein LOC101203535 [Cucumis sativus]
Length = 936
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 11/94 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+ ++RT+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 334 DALKRTLQVSNLSPLLTVEQLKQLFSFCGTVVECTITDSKH----FAYIEYSKPEEATAA 389
Query: 235 LSLAGTMLGFYPVRV-----LPSKTAIAPVNPTF 263
L+L +G P+ V LP K A A NP+
Sbjct: 390 LALNNMDVGGRPLNVEMAKSLPQKPAAA--NPSL 421
>gi|401424247|ref|XP_003876609.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492852|emb|CBZ28130.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 495
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+QDE+ RRT+YVS + + + L L T G V RIC FAFVE EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPV 259
+ A+ + G L + +RV ++ A+ V
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|389593175|ref|XP_003721841.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|321438343|emb|CBZ12095.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 495
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 49/97 (50%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 222
R + + +QDE+ RRT+YVS + + + L L T G V RIC FAF
Sbjct: 362 RQHVFPQHPRQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAF 421
Query: 223 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPV 259
VE EGA+ A+ + G L + +RV ++ A+ V
Sbjct: 422 VEMRTLEGAQRAMCMNGLQLMGFAIRVQTARNAVQDV 458
>gi|391329197|ref|XP_003739062.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Metaseiulus occidentalis]
Length = 399
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 41/69 (59%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
E IRRT+YV ++D +T E + F CG++ R+ G+ + ++ AFVEFT++ A
Sbjct: 164 EEIRRTIYVGNLDPNLTNEIVMKFFSQCGEIKYVRMGGETGASMKHAFVEFTEQASVGNA 223
Query: 235 LSLAGTMLG 243
GT+LG
Sbjct: 224 FQFNGTLLG 232
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/228 (24%), Positives = 85/228 (37%), Gaps = 67/228 (29%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL----RFAFVEFTDEEGA 231
V R + VS+I V+ EQL LF G V DCR+ L R +++F +
Sbjct: 5 VEHRVIQVSNIASGVSREQLLALFNHVGSVEDCRLYPSVEQPLENGTRICYIKFKELWSV 64
Query: 232 RAALSLAGTMLGFYPVRVLP---------------------------------------- 251
A+ L+ T+ P+ + P
Sbjct: 65 GVAMHLSNTIFMERPLLIFPMDSDQVPDEQFAIAELAPGAPISSNDEDIPELGGIRKLTN 124
Query: 252 -------SKTAIAPVNPTF----------LPR--SEDEREMCSRTIYCTNIDKKVTQGDI 292
K I ++P+ LP S++ E RTIY N+D +T +
Sbjct: 125 EISTNAAGKQVINTIDPSLALKGAPNYPALPAGLSDENVEEIRRTIYVGNLDPNLTNEIV 184
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEF---AMVSEPFSWHACFL 337
FF S CGE++ +R+ G+ S + AFVEF A V F ++ L
Sbjct: 185 MKFF-SQCGEIKYVRMGGETGASMKHAFVEFTEQASVGNAFQFNGTLL 231
>gi|225466283|ref|XP_002270255.1| PREDICTED: uncharacterized protein LOC100244513 [Vitis vinifera]
Length = 926
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 339 DALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEATAA 394
Query: 235 LSLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 265
L+L +G P+ V LP K AI +P+ LP
Sbjct: 395 LALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|296088276|emb|CBI36502.3| unnamed protein product [Vitis vinifera]
Length = 888
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E A AA
Sbjct: 339 DALKKTLQVSNLSPLLTVEQLKQLFSFCGTVVECSITDSKH----FAYIEYSKPEEATAA 394
Query: 235 LSLAGTMLGFYPVRV-----LPSKTAI--APVNPTFLP 265
L+L +G P+ V LP K AI +P+ LP
Sbjct: 395 LALNNMDVGGRPLNVEMAKSLPPKPAILNSPLASPSLP 432
>gi|326503608|dbj|BAJ86310.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 746
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE 228
A Q + ++YV D++ VT+ QL LF GQVV R+C D NS L +A+V +++
Sbjct: 114 AAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNP 173
Query: 229 -EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ ARA +L L P+RV+ S R R S I+ N+DK +
Sbjct: 174 MDAARAMEALNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTI 221
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ F + + + D S FV++
Sbjct: 222 DNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQY 257
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ + +Y+ ++D +T++QL LF G++ C+I D N V +
Sbjct: 387 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKG 445
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 249
+ FV F T EE ++A + G M+ P+ V
Sbjct: 446 SGFVSFSTREEASQALTEMNGKMISGKPLYV 476
>gi|146090675|ref|XP_001466305.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|398017412|ref|XP_003861893.1| hypothetical protein, conserved [Leishmania donovani]
gi|134070667|emb|CAM69016.1| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|322500121|emb|CBZ35196.1| hypothetical protein, conserved [Leishmania donovani]
Length = 495
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 45/85 (52%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+QDE+ RRT+YVS + + + L L T G V RIC FAFVE EGA
Sbjct: 371 RQDEMKRRTIYVSHLPGLLPQSMLLELLTTAGPVNKVRICAGAGYCTLFAFVEMRTLEGA 430
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
+ A+ + G L + +RV ++ A+
Sbjct: 431 QRAMCMNGLQLMGFAIRVQTARNAV 455
>gi|326511990|dbj|BAJ95976.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 530
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 69/156 (44%), Gaps = 15/156 (9%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE 228
A Q + ++YV D++ VT+ QL LF GQVV R+C D NS L +A+V +++
Sbjct: 114 AAQQPLPTTSLYVGDLEANVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNYSNP 173
Query: 229 -EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ ARA +L L P+RV+ S R R S I+ N+DK +
Sbjct: 174 MDAARAMEALNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTI 221
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ F + + + D S FV++
Sbjct: 222 DNKTLHDTFSAFGAILSCKVAMDDIGQSKGFGFVQY 257
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 49/91 (53%), Gaps = 3/91 (3%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ + +Y+ ++D +T++QL LF G++ C+I D N V +
Sbjct: 387 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKG 445
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 249
+ FV F T EE ++A + G M+ P+ V
Sbjct: 446 SGFVSFSTREEASQALTEMNGKMISGKPLYV 476
>gi|224112839|ref|XP_002316306.1| predicted protein [Populus trichocarpa]
gi|222865346|gb|EEF02477.1| predicted protein [Populus trichocarpa]
Length = 442
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 57/124 (45%), Gaps = 6/124 (4%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGAR 232
E I VYV I TE+ + + F CG + VDC D A + F E A+
Sbjct: 191 EDIADRVYVGGIPYYSTEDDIRSFFEGCGTITEVDCMTFPDSGKFRGIAIISFKTEAAAK 250
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL L G+ +G + +++ P KT P F P E +R IY N+ +T+ D+
Sbjct: 251 RALDLDGSDMGGFYLKIQPYKTTKVNKEPNFAPGI---VEGYNR-IYVGNLSWDITEDDL 306
Query: 293 KLFF 296
K FF
Sbjct: 307 KKFF 310
>gi|357164563|ref|XP_003580095.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 661
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D++ VT+ QL LF GQVV R+C D NS L +A+V F++ A AL
Sbjct: 38 SLYVGDLEASVTDSQLYELFSQAGQVVSVRVCRDVNSRRSLGYAYVNFSNPMDAARALE- 96
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
ML F P+ P + + +P+ R S I+ N+DK +
Sbjct: 97 ---MLNFVPLNNKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKTI 136
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ + +Y+ ++D ++++QL LF T G++ C++ D N V +
Sbjct: 302 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGISDDQLRELFSTFGKITSCKVMRDQNGVSKG 360
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRV 249
+ FV F T EE ++A + G ML P+ V
Sbjct: 361 SGFVAFSTREEASQAITEMNGKMLSGKPLYV 391
>gi|224128984|ref|XP_002328861.1| predicted protein [Populus trichocarpa]
gi|222839291|gb|EEE77628.1| predicted protein [Populus trichocarpa]
Length = 950
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 52/84 (61%), Gaps = 4/84 (4%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A++++ +++T++VS++ +T EQL LF CG VV+C I +S A++E++ E
Sbjct: 341 ARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECTIADSKHS----AYIEYSKPEE 396
Query: 231 ARAALSLAGTMLGFYPVRVLPSKT 254
A AAL+L +G P+ V +K+
Sbjct: 397 ATAALALNNMDVGGRPLNVETAKS 420
>gi|303284403|ref|XP_003061492.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456822|gb|EEH54122.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 525
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 44/78 (56%), Gaps = 4/78 (5%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+++T++V ++ VT EQL T+F CG V DCRI + F FVE+ E A A L
Sbjct: 177 LQKTLHVGNLAPGVTVEQLRTIFAFCGVVTDCRIANEKA----FGFVEYATHEQALAGLG 232
Query: 237 LAGTMLGFYPVRVLPSKT 254
L G L P+RV SKT
Sbjct: 233 LNGLALEDRPLRVEMSKT 250
>gi|357440279|ref|XP_003590417.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355479465|gb|AES60668.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 591
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 4/159 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+YV ++D VTE+ L F + G++V I D N + F FV + + AR A+ ++
Sbjct: 196 LYVKNLDPVVTEKHLGEKFSSFGKIVSLAIKKDENGQSKGFGFVNYDSPDDARRAMEAMD 255
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G+ G + V ++ + E + IY NID V +++ F S
Sbjct: 256 GSQFGSKILYVARAQKKVEREQILHHLFVEKGLKHMGSNIYVKNIDTSVGDEELRDHF-S 314
Query: 299 VCGEVQRLRLLGDYQHSTR-IAFVEFAMVSEPFSWHACF 336
CGEV +++ D + +++ FV F+ V E F +CF
Sbjct: 315 ACGEVLSAKVMRDDKGTSKGFGFVCFSTVVEAFKSMSCF 353
>gi|356525215|ref|XP_003531222.1| PREDICTED: uncharacterized protein LOC100790138 [Glycine max]
Length = 975
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 9/88 (10%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A +D+ +++T+ VS++ +T EQL LF CG VV+C I + FA++E++ E
Sbjct: 337 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECTITDSKH----FAYIEYSKPEE 392
Query: 231 ARAALSLAGTMLGFYPVRV-----LPSK 253
A AAL+L +G P+ V LP K
Sbjct: 393 ATAALALNNIDVGGRPLNVEMAKSLPPK 420
>gi|440632886|gb|ELR02805.1| hypothetical protein GMDG_05742 [Geomyces destructans 20631-21]
Length = 575
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 10/157 (6%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE +RTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 172 EDERDKRTVFVQQLAARLRSKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 228
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
EE AA+ L G L P+ ++ T P S + ++ +Y NI +
Sbjct: 229 EESVAAAIQLTGQKLLGIPIIAQLTEAEKNRQVRTAEPASNNPNQIPFHRLYVGNIHFSI 288
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
T+GD++ FE GE++ ++L + Q +R FV+F
Sbjct: 289 TEGDLQNVFEPF-GELEFVQLQKEDQGRSRGYGFVQF 324
>gi|356510930|ref|XP_003524186.1| PREDICTED: uncharacterized protein LOC100796921 [Glycine max]
Length = 969
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 9/88 (10%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A +D+ +++T+ VS++ +T EQL LF CG VV+C I FA++E++ E
Sbjct: 331 ASKDDALKKTLQVSNLSPLLTVEQLKQLFGFCGTVVECAIT----DSKHFAYIEYSKPEE 386
Query: 231 ARAALSLAGTMLGFYPVRV-----LPSK 253
A AAL+L +G P+ V LP K
Sbjct: 387 ATAALALNNIDVGGRPLNVEMAKSLPQK 414
>gi|308809515|ref|XP_003082067.1| RNA recognition motif (ISS) [Ostreococcus tauri]
gi|116060534|emb|CAL55870.1| RNA recognition motif (ISS) [Ostreococcus tauri]
Length = 412
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
E +RRT +VS+ +T EQ+ LF CG +V+CR + S FAF+EF + A AA
Sbjct: 281 EELRRTAHVSNYPSALTVEQVKQLFSFCGTIVECR---EGPSGKNFAFIEFESNKEALAA 337
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
L+L G +G +RV +KT P +PR+
Sbjct: 338 LALNGMNVGGRNIRVELAKT------PRLMPRA 364
>gi|13560783|gb|AAK30205.1|AF349964_1 poly(A)-binding protein [Daucus carota]
Length = 658
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 65/121 (53%), Gaps = 16/121 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+DQ VT+ QL LF GQVV R+C D ++ L + +V +++++ A A+ +
Sbjct: 41 SLYVGDLDQSVTDSQLYDLFNQVGQVVSVRVCRDLSTGRSLGYGYVNYSNQQDATRAIDV 100
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ + +++ +PT +R+ + I+ N+DK + DIK E
Sbjct: 101 ----LNFTPLNNKTIRVSVSRRDPT-------DRKSGAGNIFIKNLDKSI---DIKALHE 146
Query: 298 S 298
+
Sbjct: 147 T 147
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 45/85 (52%), Gaps = 2/85 (2%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF 225
+T Q D+ +YV ++D + +E+L LF G + C++ DP+ + R + FV F
Sbjct: 310 QTVKEQVDKYQGVNLYVKNLDDTIDDEKLKELFSEYGTITSCKVMRDPSGISRGSGFVAF 369
Query: 226 -TDEEGARAALSLAGTMLGFYPVRV 249
T EE +RA + G M+ P+ V
Sbjct: 370 STPEEASRALGEMNGKMIVSKPLYV 394
>gi|427798071|gb|JAA64487.1| Putative splicing factor arginine/serine-rich, partial
[Rhipicephalus pulchellus]
Length = 381
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 36/65 (55%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
E IRRTVYV ++D T EQL F G+V R+ G + RFAFVEFT++ A
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFFSQMGEVKYVRMAGGESQPTRFAFVEFTEQSSVGRA 130
Query: 235 LSLAG 239
L G
Sbjct: 131 LQFNG 135
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
E RT+Y N+D T + FF S GEV+ +R+ G TR AFVEF
Sbjct: 71 EEIRRTVYVGNLDSSATTEQLLKFF-SQMGEVKYVRMAGGESQPTRFAFVEF 121
>gi|328852755|gb|EGG01898.1| hypothetical protein MELLADRAFT_91734 [Melampsora larici-populina
98AG31]
Length = 1071
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 74/148 (50%), Gaps = 10/148 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ + T+E + + F G++ D R S RF +V+FT + A++AL+
Sbjct: 719 RSTLYVTNFPEDATDEWIRSKFGEFGKIFDVRWPSKRFKSTRRFCYVQFTSPDSAQSALA 778
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T V PS+ ++ ++ + R +Y T + K V + D++ F
Sbjct: 779 LHNT-------EVAPSQKMSVFISDPLRKKARTDVGANDRELYITCLTKFVQEADLRKLF 831
Query: 297 ESVCGEVQRLRL-LGDYQHSTRIAFVEF 323
+ G+++ +R+ L + HS AFVEF
Sbjct: 832 QPF-GDIKGVRMILNEDGHSKGFAFVEF 858
>gi|297816826|ref|XP_002876296.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
gi|297322134|gb|EFH52555.1| RNA recognition motif-containing protein [Arabidopsis lyrata subsp.
lyrata]
Length = 599
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 15/171 (8%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 225
T N ++D V+ + +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 152 TDNKEEDGVVPKKLYVGGIPYQSTEDEIRSYFRSCGVITKVDCKMRPEDGAFSGIAFITF 211
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 279
E+GA+ AL+ +G R L + + P F+PR + EM +Y
Sbjct: 212 ETEDGAKRALAFDRAAMGD---RFLTIQQYVKTTTP-FVPRRKTSSGFAPEMVDGYNRVY 267
Query: 280 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMVS 327
N+ T+ DI KLF + V V+ + + G+++ + F + V+
Sbjct: 268 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVA 318
>gi|224060343|ref|XP_002300152.1| predicted protein [Populus trichocarpa]
gi|222847410|gb|EEE84957.1| predicted protein [Populus trichocarpa]
Length = 892
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 9/89 (10%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
A++++ +++T++VS++ +T EQL LF CG VV+C I +S A++E++ E
Sbjct: 314 KARKEDALKKTLHVSNLSPLLTVEQLKQLFSFCGTVVECAIADSKHS----AYIEYSKPE 369
Query: 230 GARAALSLAGTMLGFYPVRV-----LPSK 253
A AAL+L +G P+ V LP K
Sbjct: 370 EATAALALNNMDVGGRPLNVEMAKSLPQK 398
>gi|341038993|gb|EGS23985.1| RNA splicing factor (pad-1)-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 594
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 12/163 (7%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVE 224
R + DE RRTV+V + ++ +L F G V + +I D N +VE
Sbjct: 218 REPSPTNDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVE 277
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCT 281
F EE AAL L G L P+ V P+ K A P S + +Y
Sbjct: 278 FKSEESVAAALQLTGQKLLGIPIIVQPTEAEKNRQARTTSGHHPNS-----VPFHRLYVG 332
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 333 NIHFSITETDLQHVFEPF-GELEFVQLQKDENGRSRGYGFVQF 374
>gi|393212445|gb|EJC97945.1| hypothetical protein FOMMEDRAFT_97432 [Fomitiporia mediterranea
MF3/22]
Length = 1017
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 85/175 (48%), Gaps = 22/175 (12%)
Query: 156 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP- 214
G ++ K+R+N + + + T+YV++ ++V + + LF G + D R
Sbjct: 660 GLTKDKKRINGQEISVHL--AWQSTLYVTNFPEKVDDAYIRQLFDQFGVIFDVRWPSKKF 717
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ RF +V+FT +E A+AALSL GT L P P+N F+ E ++E
Sbjct: 718 KATRRFCYVQFTSKEAAQAALSLHGTELE-------PG----LPMN-VFISNPERKKERT 765
Query: 275 -----SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
R +Y + K V + D+K F++ G V+ +R+ D + +AFVEF
Sbjct: 766 DAGADDREVYVAGLSKFVIRDDLKKLFKTF-GPVKDIRVTKDDTGLCKGVAFVEF 819
Score = 42.0 bits (97), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 64/144 (44%), Gaps = 10/144 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R VYV+ + + V + L LF T G V D R+ D + + AFVEF DE A+ AL
Sbjct: 772 REVYVAGLSKFVIRDDLKKLFKTFGPVKDIRVTKDDTGLCKGVAFVEFEDEPSAQRALQA 831
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNP-----TFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
+ + V S + + + + L R D R SR++ + +G +
Sbjct: 832 NNHDVKNRRIAVTMSDSRVRARHKNEQTASGLGRRSDVR---SRSVRIKGLPPGTQEGLL 888
Query: 293 KLFFESVCGEVQRLRLLGDYQHST 316
+ E V V+RL + D Q +T
Sbjct: 889 QQALEKVVP-VKRLEVFQDLQEAT 911
Score = 42.0 bits (97), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 6/92 (6%)
Query: 149 TTRRKR----NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQ 204
+TR+++ G S G ++ ++ + + TV+V+D+ TE+ L LF CG
Sbjct: 573 STRKRKVEDSAGRSDGNKKAKMGSTPPLKRDRENSTVFVADLPSGATEDDLTALFKDCGD 632
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+ + +I NS R A +EF D E A L+
Sbjct: 633 IREIKITSLANS--RVATIEFVDRESVPAGLT 662
>gi|317106693|dbj|BAJ53194.1| JHL03K20.3 [Jatropha curcas]
Length = 642
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
++ + ++YV D++Q VTE QL LF GQ+V R+C D S L + +V + + A
Sbjct: 24 NQFVSTSLYVGDLEQNVTETQLYDLFNQLGQIVSIRVCRDLTSRRSLGYGYVNYNNVHDA 83
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
AL + L F PV P + + +PT R+ + IY N+DK +
Sbjct: 84 AQALEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGAGNIYIKNLDKAI 128
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD-PNSVLRF 220
R + +D IR++ +Y+ ++D+ + + L F G ++ C++ D L +
Sbjct: 100 IRIMYSYRDPTIRKSGAGNIYIKNLDKAIDNKALHDTFSAFGNILSCKVATDSAGQSLGY 159
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER---EMCSR 276
FV+F +EE A+ A+ L G +L V V P FL R E E +
Sbjct: 160 GFVQFDNEESAKNAIDKLNGMLLNDKQVYVGP-----------FLRRQERESGTDKTKFN 208
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 209 NVYVKNLSETTTEEDLKKIF 228
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D +T+++L LF G + C++ DPN V + + FV + T EE ++A +
Sbjct: 313 LYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSKGSGFVAYSTAEEASKALTEMN 372
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 373 GKMIVSKPLYV 383
>gi|321474916|gb|EFX85880.1| hypothetical protein DAPPUDRAFT_20224 [Daphnia pulex]
Length = 346
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 163 RMNCRTSNA---QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS +QD ++V D+ ++ L F G++ DCR+ DP ++
Sbjct: 67 KVNWATSPGNAPKQDTSKHFHIFVGDLSPEIETHTLRDAFAAFGEISDCRVVRDPQTLKS 126
Query: 220 --FAFVEFTDEEGARAALS-LAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDE----R 271
+ FV F + A A++ + G LG +R ++ AP + P S +E
Sbjct: 127 KGYGFVSFVKKSDAENAIAGMNGQWLGTRAIRTNWATRKPPAPKDAGSKPMSYEEVFGQS 186
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+ T+YC N+ + T+ ++ F G++Q +R+ D + AF+ FA
Sbjct: 187 SSTNCTVYCGNLAQGSTEEALQKIFGPY-GQIQEIRVFKDKGY----AFIRFA 234
>gi|167517070|ref|XP_001742876.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779500|gb|EDQ93114.1| predicted protein [Monosiga brevicollis MX1]
Length = 1825
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 41/155 (26%), Positives = 77/155 (49%), Gaps = 7/155 (4%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEE 229
A + E RTV+V ++D VTE++L F CG++VD R+ + + +A++EF
Sbjct: 642 AHKVEAEDRTVFVKNLDFSVTEDELRARFADCGEIVDVRMPFNHKGKAKGYAYLEFASAS 701
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
ALS ++G P+ V + P+ + ++ ++++ N+D K ++
Sbjct: 702 AVNPALSKDRQIMGTRPMLV--DRYVDRSQMPSLPFKHTTDKN--PKSLFVKNLDYKASE 757
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+IK F G V+ +RL+ + S R +V+F
Sbjct: 758 AEIKDLFNK-HGAVEAVRLVTKFDGSRRDFCYVDF 791
>gi|391332716|ref|XP_003740776.1| PREDICTED: polyadenylate-binding protein 1-like [Metaseiulus
occidentalis]
Length = 660
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 76/168 (45%), Gaps = 22/168 (13%)
Query: 167 RTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FA 221
R +Q+D +R++ V++ ++ + + + + F G ++ CR+ D R +
Sbjct: 83 RIMWSQRDPSLRKSGVGNVFIKNLHKDIDNKAIFDTFSAFGNILSCRVATDEQGNSRGYG 142
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT---- 277
FV F EE A A++ ML +V K F+PRSE ER M +
Sbjct: 143 FVHFETEEAANEAINKVNGML-LNEKKVFVGK---------FVPRSERERMMGDKARLFT 192
Query: 278 -IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N +++ G +K FE V G++ R++ D +R FV F
Sbjct: 193 NVYVKNFGEELDDGKLKEMFE-VYGKITSARVMTDQTGKSRGFGFVSF 239
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 65/149 (43%), Gaps = 19/149 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D VTE L F G V+ R+C D S L +A+V F A AL
Sbjct: 12 SLYVGDLDPDVTESMLFEKFCQAGPVLSIRVCRDMISRRSLGYAYVNFHQPGDAERALD- 70
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ F P++ P + + +P+ R+ ++ N+ K + D K F+
Sbjct: 71 ---TMNFEPLKNRPMRIMWSQRDPSL-------RKSGVGNVFIKNLHKDI---DNKAIFD 117
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
S G + R+ D Q ++R FV F
Sbjct: 118 TFSAFGNILSCRVATDEQGNSRGYGFVHF 146
>gi|340055809|emb|CCC50130.1| conserved hypothetical protein, fragment, partial [Trypanosoma
vivax Y486]
Length = 657
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 77/166 (46%), Gaps = 10/166 (6%)
Query: 92 VDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTR 151
V + + P+AA F +N + F + P G N F T NT + R
Sbjct: 19 VSSVRGIEPLAASFPMCYASNTPVLQFQVSELMPPMEGGRNPF---TYFGPNTGSNPKKR 75
Query: 152 RKRNGYSQGK-RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
+ S K +R +A + +++ RTV++ + + + + +LA L CG+ + RI
Sbjct: 76 LHQEFKSLSKEQRKRLVEEDAVKTDLLARTVHLRFLPKGMLQSELAALCAECGEYLRVRI 135
Query: 211 CGDPNSV--LRFAFVEFTDEEGARAALSLAGTML----GFYPVRVL 250
CG+ S + FVEF D++GA A + +G L G P+R++
Sbjct: 136 CGNATSTQNWIYGFVEFADKQGAAAMMRRSGMELSNGPGKPPLRLM 181
>gi|357134255|ref|XP_003568733.1| PREDICTED: uncharacterized protein LOC100843156 [Brachypodium
distachyon]
Length = 786
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 51/95 (53%), Gaps = 9/95 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T + + E +++ V +S++ +T E L LF CG+VVDC I + A+VE++
Sbjct: 342 TGSVDKAEALKKMVQISNLSLLLTVEHLKQLFGYCGKVVDCTIT----ETKQTAYVEYSK 397
Query: 228 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIA 257
E A AAL+L +G P+ V LP KT +A
Sbjct: 398 PEEATAALALNNMDVGGRPLNVEMAKTLPPKTNLA 432
>gi|396488840|ref|XP_003842956.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
gi|312219534|emb|CBX99477.1| hypothetical protein LEMA_P087160.1 [Leptosphaeria maculans JN3]
Length = 590
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/180 (27%), Positives = 79/180 (43%), Gaps = 11/180 (6%)
Query: 152 RKRNGYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
R+RNG RR++ +T + +D+ +RT++V I Q+ L + F T G VV+ +
Sbjct: 153 RRRNGADD--RRLSRKTPEPEVTEDDRDKRTIFVQQISQRAETRHLRSFFETVGPVVEAQ 210
Query: 210 ICGD--PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPR 266
I D +VEF +EE AL L G L P+ L P+
Sbjct: 211 IVKDRVTGRSKGVGYVEFKEEESVPKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGA 270
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEF 323
+ +Y NI VT+ D++ FE GE++++ L D + R FV+F
Sbjct: 271 APGANGAPFHRLYVGNIHFSVTEKDLQEIFEP-YGELEQVILQRDELNPGRSKGYGFVQF 329
>gi|367034680|ref|XP_003666622.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
gi|347013895|gb|AEO61377.1| hypothetical protein MYCTH_2311474 [Myceliophthora thermophila ATCC
42464]
Length = 575
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 74/166 (44%), Gaps = 21/166 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
DE RRTV+V + ++ +L F G V + +I D N +VEF +EE
Sbjct: 189 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 248
Query: 232 RAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
AAL L G L PV V P+ + + + +P +P +Y NI
Sbjct: 249 AAALQLTGQKLLGIPVIVQPTEAEKNRQARNSESSGHPNSIP---------FHRLYVGNI 299
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMVSE 328
+T+ D++ FE GE++ ++L D +R FV+F S+
Sbjct: 300 HFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQFRDASQ 344
>gi|194757405|ref|XP_001960955.1| GF11244 [Drosophila ananassae]
gi|190622253|gb|EDV37777.1| GF11244 [Drosophila ananassae]
Length = 307
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 67/149 (44%), Gaps = 15/149 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R +Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 113 RKIYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDTEEAARAAIEK 172
Query: 238 AGTML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKL 294
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++
Sbjct: 173 VNGMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLGEEFTEQHLRE 221
Query: 295 FFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
FE +L D S R FV +
Sbjct: 222 MFEPYGRITSHKLMLDDEGRSRRFGFVAY 250
>gi|440470687|gb|ELQ39749.1| RNA-binding protein rsd1 [Magnaporthe oryzae Y34]
Length = 566
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 231 ARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
AAL L G L PV V P+ KT T +P +Y N
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVP---------FHRLYVGN 279
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 280 IHFSITEQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 320
>gi|225449617|ref|XP_002279438.1| PREDICTED: 31 kDa ribonucleoprotein, chloroplastic [Vitis vinifera]
gi|296086279|emb|CBI31720.3| unnamed protein product [Vitis vinifera]
Length = 415
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 76/173 (43%), Gaps = 10/173 (5%)
Query: 156 GYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGD 213
G +G + + S++Q++ VYV I TE+ + + F +CG + VDC + +
Sbjct: 159 GGEKGVVKETAQISDSQENGDASNKVYVGGIPYYSTEDDIRSYFDSCGTITEVDCMMFPE 218
Query: 214 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
A + F E A+ AL+L G +G +++ P KT A + F P EM
Sbjct: 219 SGKFRGIAIISFKTEAAAKRALALDGADMGGLFLKIQPYKTTRANKSSDFAP------EM 272
Query: 274 CS--RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
IY N+ +T+ +++ FF R + + Q A V+F+
Sbjct: 273 VEGYNRIYVGNLPWDITEDEVRKFFSRCNVSSIRFGMDKETQEFRGYAHVDFS 325
>gi|440487895|gb|ELQ67659.1| RNA-binding protein rsd1 [Magnaporthe oryzae P131]
Length = 570
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 231 ARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
AAL L G L PV V P+ KT T +P +Y N
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVP---------FHRLYVGN 279
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 280 IHFSITEQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 320
>gi|393215302|gb|EJD00793.1| RNA-binding domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 589
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 81/166 (48%), Gaps = 14/166 (8%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
+S++Q+D +TV+V + V + LA F CG+VV R+ D N+ F FVEF
Sbjct: 313 SSDSQEDS---KTVFVGRLSWNVDNDWLAQEFADCGEVVSARVQMDRNTGKSRGFGFVEF 369
Query: 226 TDEEGARAALSLAGTM-LGFYPVRVLPSKTAIAPVNPTFLPRS-EDEREMCSRTIYCTNI 283
EGA AA++L G + V + KT+ P +P ++ D S ++ N+
Sbjct: 370 ATAEGANAAVALNGQKEIDGRAVNL--DKTSAKPADPERRAKAFGDSTSAPSSVLFVGNV 427
Query: 284 DKKVTQ-GDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMV 326
+T+ G ++F E GEV+ +RL D Q +VEF V
Sbjct: 428 SFDMTEDGLWEVFAE--YGEVKSVRLPTDRDTQRLKGYGYVEFVDV 471
>gi|289740845|gb|ADD19170.1| polyadenylate-binding protein [Glossina morsitans morsitans]
Length = 321
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 72/148 (48%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+Y+ ++++ + + + F G +++C + D + R + FV+F EE ARAA+ +
Sbjct: 130 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEHGNSRGYGFVQFDSEEAARAAIEKVN 189
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
G + V V+ ++PR + E+E + R +Y N ++ ++ ++K F
Sbjct: 190 GILCNSQKVHVV-----------KYIPRRDREQEKATQFRNLYVKNFNEDFSEQNMKEMF 238
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +++ D + S R FV F
Sbjct: 239 EPY-GRITSHKIMTDEEGRSKRFGFVAF 265
>gi|389644626|ref|XP_003719945.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
gi|351639714|gb|EHA47578.1| RNA splicing factor Pad-1 [Magnaporthe oryzae 70-15]
Length = 564
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 70/162 (43%), Gaps = 21/162 (12%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 169 EDERDRRTVFVQQLAARLRTRELKEFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFKTEES 228
Query: 231 ARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
AAL L G L PV V P+ KT T +P +Y N
Sbjct: 229 VAAALQLTGQKLLGIPVIVQPTEAEKNRAVKTESTGTQQTSVP---------FHRLYVGN 279
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 280 IHFSITEQDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 320
>gi|330920965|ref|XP_003299224.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
gi|311327182|gb|EFQ92678.1| hypothetical protein PTT_10174 [Pyrenophora teres f. teres 0-1]
Length = 570
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 68/158 (43%), Gaps = 9/158 (5%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEE 229
+D+ +RT++V I Q+ L T F G V++ +I D LR +VEF DEE
Sbjct: 171 EDDRDKRTIFVQQISQRAETHHLRTFFERVGPVIEAQIVKD-RVTLRSKGVGYVEFKDEE 229
Query: 230 GARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
AL L G L P+ L P+ + +Y NI VT
Sbjct: 230 SVAKALELTGQKLKGVPIIAQLAEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFSVT 289
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEF 323
+GD++ FE G ++++ L D + R FV+F
Sbjct: 290 EGDLRDIFEPF-GALEQVILQRDEANPGRSKGYGFVQF 326
>gi|224061487|ref|XP_002300504.1| predicted protein [Populus trichocarpa]
gi|222847762|gb|EEE85309.1| predicted protein [Populus trichocarpa]
Length = 155
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 10/89 (11%)
Query: 74 HMERKMG-ESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGY-- 130
H +R G ES+K E+R+L ++ SKLNPMAAEFVPPSL+N F G NG Y
Sbjct: 60 HQQRSNGGESYK-REIRELQELFSKLNPMAAEFVPPSLSNNNSFGTVNGLNGVNGGFYGN 118
Query: 131 ---TNNFIMHTDG---TANTNGHTTTRRK 153
+NN +++ +G NG+ R K
Sbjct: 119 SSSSNNLVVNGNGFDRNGQVNGNAARRVK 147
>gi|213410431|ref|XP_002175985.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
gi|212004032|gb|EEB09692.1| RNA-binding protein rsd1 [Schizosaccharomyces japonicus yFS275]
Length = 540
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 85/175 (48%), Gaps = 19/175 (10%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGD 213
Q +RR + + + ++E RRTV+V+ + ++T +L F G Q+V R+ G
Sbjct: 199 QSRRRES--SPHYSEEERDRRTVFVTQLANRLTTHELREFFEQAGAVRDAQIVRDRVTGR 256
Query: 214 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
V A+VEF E+ + AL+L+G + PV V + A N SE R +
Sbjct: 257 SKGV---AYVEFRREDSVQVALTLSGKRILGIPVIV---QLTEAEKNRKARELSEQNRAL 310
Query: 274 CSRTIY---CT-NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ + C NI +T D+K FE GE++ +RL D Q+ ++ F++F
Sbjct: 311 SAELPFHRLCVGNIHFNITDEDLKAIFEPF-GELEYVRLQRDDQNRSKGFGFIQF 364
>gi|154338582|ref|XP_001565513.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134062565|emb|CAM39007.1| putative poly(A)-binding protein 3 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 552
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 84/205 (40%), Gaps = 30/205 (14%)
Query: 127 GFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----VY 182
G+GY N F D + T G + G+ R A +D + R++ ++
Sbjct: 52 GYGYVN-FQTTADAEKVIDALNFT-----GIAPGR---YIRVMFAIRDPLQRKSGANNIF 102
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTM 241
V +D V+ + L F CG+V+ C++ D + + FV+F +GA+AAL + G
Sbjct: 103 VKKLDAAVSAKALQAAFSRCGRVLSCKVALDSEGHSKGYGFVQFETADGAKAALDMNGAK 162
Query: 242 LGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDIKLFFES 298
+G V V P R D M + R IY NI T+ D++ E
Sbjct: 163 VGDSEVEVAP------------FVRRVDREAMAAKSFRNIYIKNIKATATEVDMRTTLEK 210
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEF 323
G+V L L T+ A F
Sbjct: 211 F-GKVTSLFLAEHAPFLTKFALAVF 234
Score = 41.6 bits (96), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
R +YV + +T+++L +F G++ C I + N LR FAFV F D++ A AA+
Sbjct: 289 RNLYVKHLPDDITDDKLREIFAPFGKITSCAIMRESNGSLRGFAFVCFEDKQHATAAM 346
>gi|125524053|gb|EAY72167.1| hypothetical protein OsI_00016 [Oryza sativa Indica Group]
Length = 920
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 289 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 344
Query: 228 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 345 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 382
>gi|115433970|ref|NP_001041743.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|52076599|dbj|BAD45501.1| nuclear protein -like [Oryza sativa Japonica Group]
gi|113531274|dbj|BAF03657.1| Os01g0101600 [Oryza sativa Japonica Group]
gi|125568671|gb|EAZ10186.1| hypothetical protein OsJ_00013 [Oryza sativa Japonica Group]
gi|215712245|dbj|BAG94372.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215768572|dbj|BAH00801.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 978
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 347 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 402
Query: 228 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 403 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 440
>gi|384499302|gb|EIE89793.1| hypothetical protein RO3G_14504 [Rhizopus delemar RA 99-880]
Length = 292
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 73/155 (47%), Gaps = 15/155 (9%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TV+V ++ T E++ T F CG V D R+ PN V FA ++FT EG +AA++L
Sbjct: 82 TVFVGQLNFDATAEEIRTHFGQCGPVSDVRLRMHPNGVKSRGFAHIDFTSAEGKQAAMAL 141
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
GT +RV ++ A T + P+++ ++ N+ + +K F
Sbjct: 142 DGTEFMGRTIRVDDAQPAQGRSTDTNYGPKTD--------KVFVANLSYDTDEDSLKQAF 193
Query: 297 E---SVCGEVQRLRLLGDYQHSTRIAFVEFAMVSE 328
E ++ GE+ L + D IA+++F E
Sbjct: 194 EKFGTIVGEIG-LPISRDTGRIRGIAYIQFETEDE 227
>gi|15128444|dbj|BAB62628.1| P0402A09.11 [Oryza sativa Japonica Group]
gi|20804433|dbj|BAB92130.1| P0455C04.5 [Oryza sativa Japonica Group]
Length = 990
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 53/98 (54%), Gaps = 9/98 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T + +V+++ V +S++ +T + + LF CG+VVDC I + A+VE++
Sbjct: 359 TDKTDKGDVLKKMVQISNLSPLLTVDHIKQLFGYCGKVVDCTITDSKH----IAYVEYSK 414
Query: 228 EEGARAALSLAGTMLGFYPVRV-----LPSKTAIAPVN 260
+E A AAL+L +G P+ V LP KT +A N
Sbjct: 415 QEEATAALALNNMDVGGRPLNVEMAKSLPPKTNLANSN 452
>gi|367054118|ref|XP_003657437.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
gi|347004703|gb|AEO71101.1| hypothetical protein THITE_2123146 [Thielavia terrestris NRRL 8126]
Length = 573
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 13/157 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
DE RRTV+V + ++ +L F G V + +I D N +VEF +EE
Sbjct: 184 DERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEESV 243
Query: 232 RAALSLAGTMLGFYPVRVLPSKTA----IAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
AAL L G L PV V P++ + + P S + +Y NI +
Sbjct: 244 AAALQLTGQKLLGIPVIVQPTEAEKNRQVRNTESSGHPNS-----VPFHRLYVGNIHFSI 298
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 299 TETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 334
>gi|414588969|tpg|DAA39540.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 281
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEF 323
+ C G + ++ D +R FV+F
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQF 170
>gi|221111756|ref|XP_002159647.1| PREDICTED: RNA-binding protein 39-like [Hydra magnipapillata]
Length = 528
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 78/181 (43%), Gaps = 12/181 (6%)
Query: 151 RRKRNGYSQ----GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
RR R+G + R + Q+E RTV++ + +QVT + F GQV
Sbjct: 152 RRSRDGVTTISLLSDREREWDEEHVSQEERDSRTVFIMQLAKQVTIRDIQDFFSKVGQVR 211
Query: 207 DCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
D R+ D NS +VEFTD A+ L+G L P+ V P+ +A N
Sbjct: 212 DVRLISDRNSRRSKGIGYVEFTDASAVTLAIKLSGQKLLGVPIMVSPT---MAEKNRYAA 268
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVE 322
++ + +Y ++ +T+ ++ FE G V+ ++L D + S FV
Sbjct: 269 AQAALVKPQGPMKLYVGSLHYNITEPMLRAIFEP-FGTVESVQLQYDSETNRSKGFGFVN 327
Query: 323 F 323
F
Sbjct: 328 F 328
>gi|170055835|ref|XP_001863758.1| nucleolysin tia-1 [Culex quinquefasciatus]
gi|167875726|gb|EDS39109.1| nucleolysin tia-1 [Culex quinquefasciatus]
Length = 456
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 75/157 (47%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++DQ VTE+ L LF G V C+I + +S +AF+E+ + A+
Sbjct: 3 DEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYASHQSAQT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+++ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F +E
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
>gi|86170621|ref|XP_966051.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|46362293|emb|CAG25231.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 582
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/152 (23%), Positives = 66/152 (43%), Gaps = 9/152 (5%)
Query: 100 PMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQ 159
PM + P + N + + N N ++ + G T ++ S+
Sbjct: 76 PMVVSVIEPIINNTNLSELSTTECDKNV-----NSLLDVRNSITNQGVQTLLLQKQVISE 130
Query: 160 GKRRM----NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN 215
K+R+ N + +V + VY+ +I ++ EE + F G ++ +
Sbjct: 131 QKKRLVDFQNSLNEKNNKFDVFSKIVYMENIPEKYGEEDIKAFFQNVGNTTSYKLQYNEQ 190
Query: 216 SVLRFAFVEFTDEEGARAALSLAGTMLGFYPV 247
+ AFVEF +EE A+AAL+L+GT +G + +
Sbjct: 191 KKVHTAFVEFKNEEHAKAALNLSGTKVGLHEI 222
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 46/200 (23%), Positives = 71/200 (35%), Gaps = 57/200 (28%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
I VYV ++ +TEE + F +C +++ P ++ +EF EG A
Sbjct: 7 IANVVYVKNLSSDITEENIREKFGSCDEIISITFKNFPGLNQKYCQIEFKTSEGITNASR 66
Query: 237 LAGTMLGFYPVRVLPSKTAIAP-VNPTFLPR----------------------------- 266
L G L P+ V + I P +N T L
Sbjct: 67 LNGESLLNVPMVV----SVIEPIINNTNLSELSTTECDKNVNSLLDVRNSITNQGVQTLL 122
Query: 267 ------SEDEREMC----------------SRTIYCTNIDKKVTQGDIKLFFESVCGEVQ 304
SE ++ + S+ +Y NI +K + DIK FF++V G
Sbjct: 123 LQKQVISEQKKRLVDFQNSLNEKNNKFDVFSKIVYMENIPEKYGEEDIKAFFQNV-GNTT 181
Query: 305 RLRLLGDYQHSTRIAFVEFA 324
+L + Q AFVEF
Sbjct: 182 SYKLQYNEQKKVHTAFVEFK 201
>gi|115460618|ref|NP_001053909.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|75327488|sp|Q7XTT4.2|NUCL2_ORYSJ RecName: Full=Nucleolin 2; AltName: Full=Protein NUCLEOLIN LIKE 2
gi|38344339|emb|CAD41755.2| OSJNBa0058K23.21 [Oryza sativa Japonica Group]
gi|113565480|dbj|BAF15823.1| Os04g0620700 [Oryza sativa Japonica Group]
gi|215737156|dbj|BAG96085.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 707
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 449 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 508
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 509 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 563
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFA 324
I+ E CGE+ R+ + DY+ S +A+++FA
Sbjct: 564 QIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFA 602
>gi|345491945|ref|XP_001599982.2| PREDICTED: nucleolar protein 12-like [Nasonia vitripennis]
Length = 613
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 83/179 (46%), Gaps = 38/179 (21%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-------------- 212
R S+ +Q + RT+YV ++ +++T + + LF G++ R+ G
Sbjct: 320 RLSSEEQAALDARTIYVGNVPKEMTVKTIKKLFRPFGEIDSIRVRGVVAEDSRMSAKVAT 379
Query: 213 -----DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPR 266
P + +V F +E+ A+ AL L G LG +RV L +K +
Sbjct: 380 ITKKMHPKVSTVYVYVAFKEEQSAKDALKLNGHKLGENTLRVDLSTKN-----------K 428
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH--STRIAFVEF 323
D++ R ++ NI +T+ +++ F+S CG+++ +R++ D + S I +V F
Sbjct: 429 DHDQK----RAVFLGNIPFDITEDEVRKHFDS-CGKIESVRIVKDRKSGLSRGIGYVNF 482
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 2/99 (2%)
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
K NG+ G+ + S +D +R V++ +I +TE+++ F +CG++ RI
Sbjct: 408 KLNGHKLGENTLRVDLSTKNKDHDQKRAVFLGNIPFDITEDEVRKHFDSCGKIESVRIVK 467
Query: 213 DPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
D S L +V F +++ AL L GT L +RV
Sbjct: 468 DRKSGLSRGIGYVNFENQDSVTLALELNGTNLKNREIRV 506
>gi|116200107|ref|XP_001225865.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
gi|88179488|gb|EAQ86956.1| hypothetical protein CHGG_08209 [Chaetomium globosum CBS 148.51]
Length = 586
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/173 (27%), Positives = 75/173 (43%), Gaps = 21/173 (12%)
Query: 162 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLR 219
R R ++ DE RRTV+V + ++ +L F G V + +I D N
Sbjct: 166 RNSTPRDTSPTGDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKG 225
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS--------KTAIAPVNPTFLPRSEDER 271
+VEF EE AAL L G L PV V P+ + + + +P +P
Sbjct: 226 VGYVEFKGEESVAAALQLTGQKLLGIPVIVQPTEAEKNRQVRNSESSGHPNSVP------ 279
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 280 ---FHRLYVGNIHFSITETDLQNVFEPF-GELEFVQLQKDDSGRSRGYGFVQF 328
>gi|413916837|gb|AFW56769.1| hypothetical protein ZEAMMB73_720605 [Zea mays]
Length = 318
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/29 (79%), Positives = 26/29 (89%)
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQR 305
TIY TNIDKKVT+ D+KLFFES+CGEV R
Sbjct: 255 TIYRTNIDKKVTEADLKLFFESICGEVGR 283
>gi|356536386|ref|XP_003536719.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 597
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 74/167 (44%), Gaps = 19/167 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGAR 232
E +RTV+ I + E + F G+V D R+ D NS ++EF D
Sbjct: 219 ERDQRTVFAYQISLKADERDVYEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVP 278
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT----------FLPRSEDEREMCSRTIYCTN 282
A++L+G L PV V PS+ V T P S +R +Y N
Sbjct: 279 MAIALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYS-----GGARKLYVGN 333
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMVSE 328
+ +T+ DI+ FE+ G+V+ ++L L + H FV+FA + +
Sbjct: 334 LHVSITEADIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARLED 379
>gi|357475273|ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
gi|355508977|gb|AES90119.1| Poly(A)-binding protein [Medicago truncatula]
Length = 654
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 14/93 (15%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +E+L LF + G + C++ DPN V R + FV F T EE +RA L +
Sbjct: 318 LYVKNLDDSIADEKLKELFSSYGTITSCKVMRDPNGVSRGSGFVAFSTPEEASRALLEMN 377
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
G M+ P+ V T R ED R
Sbjct: 378 GKMVASKPLYV------------TLAQRKEDRR 398
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 58/124 (46%), Gaps = 13/124 (10%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 234
+ ++YV D+D VT+ QL LF GQVV R+C D + L + +V +++ + A A
Sbjct: 32 VTTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARA 91
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L + L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 92 LDV----LNFTPLNNRPIRIMYSHRDPSI-------RKSGQGNIFIKNLDKAIDHKALHD 140
Query: 295 FFES 298
F S
Sbjct: 141 TFSS 144
>gi|125591671|gb|EAZ32021.1| hypothetical protein OsJ_16200 [Oryza sativa Japonica Group]
Length = 728
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 470 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 529
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 530 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 584
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFA 324
I+ E CGE+ R+ + DY+ S +A+++FA
Sbjct: 585 QIRNSLEEHFGSCGEITRVSIPKDYETGASKGMAYMDFA 623
>gi|392558318|gb|EIW51507.1| RNA-binding protein Prp24 [Trametes versicolor FP-101664 SS1]
Length = 1049
Score = 53.5 bits (127), Expect = 2e-04, Method: Composition-based stats.
Identities = 44/159 (27%), Positives = 75/159 (47%), Gaps = 16/159 (10%)
Query: 162 RRMNCRTSNAQQ------DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR-ICGDP 214
RR++ SN ++ + R +Y++ + + VT+E L TLF T G V D R I D
Sbjct: 779 RRLSVYISNPERRKERTDSDANEREIYIAGLSKLVTKEDLETLFKTYGNVKDVRMILDDK 838
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN--PTFLPRSEDERE 272
FAF+EFT E ARAAL+ L + V + + + P N P + E
Sbjct: 839 GKSKGFAFIEFTTEPEARAALAANNHELKKRRMAVTLADSRVKPKNKAPGY------REE 892
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+ +R++ N+ +G ++ E +++R+ + D
Sbjct: 893 VRNRSVRVKNLPPNTQEGLLQQALEK-HAKIKRVEVFAD 930
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 44/154 (28%), Positives = 71/154 (46%), Gaps = 12/154 (7%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ + + + TLF G++ D R S RF +V++T A AL
Sbjct: 710 RSTLYVTNFPEDADDTFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQYTSPTSAENALE 769
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L GT + + ++ NP D + R IY + K VT+ D++ F
Sbjct: 770 LNGTDME------EGRRLSVYISNPERRKERTDS-DANEREIYIAGLSKLVTKEDLETLF 822
Query: 297 ESVCGEVQRLRL-LGDYQHSTRIAFVEFAMVSEP 329
++ G V+ +R+ L D S AF+EF +EP
Sbjct: 823 KTY-GNVKDVRMILDDKGKSKGFAFIEF--TTEP 853
Score = 42.4 bits (98), Expect = 0.29, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 10/109 (9%)
Query: 136 MHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEV---IRR-----TVYVSDID 187
M D +A T H+ + ++ +R + +E ++R TV+V D+
Sbjct: 586 MDVDPSAATGSHSKRKADDEDSAESSKRPRMALTEKHTEEQPAKLKRDRENSTVFVGDLP 645
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
V +E+L LF CG + + +I PNS++ A VEF + + AAL+
Sbjct: 646 AGVEDEELRALFKDCGVIREVKITQLPNSLV--ATVEFLERDSVPAALT 692
>gi|302817804|ref|XP_002990577.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
gi|300141745|gb|EFJ08454.1| hypothetical protein SELMODRAFT_448081 [Selaginella moellendorffii]
Length = 602
Score = 53.5 bits (127), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/195 (27%), Positives = 86/195 (44%), Gaps = 19/195 (9%)
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVI--------RRTVYVSDIDQQVTEEQLATLFLTCGQ 204
K+ S+ ++ N + + + DEV +T++V +I VT+E LA F G+
Sbjct: 311 KQAPASKKQKLENGKAAATKTDEVKTPAKEAGESKTLFVRNIPFSVTDEDLAQYFEDAGE 370
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLG---FYPVRVLPSKT-AIAPVN 260
VV RI N FA VEF+ E A+ AL+ +G +G Y P T A P
Sbjct: 371 VVGVRIAQGDNGPKGFAHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASGPKR 430
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK----LFFESVCGEVQRLRLLGDYQHS- 315
P R+ T++ DK + I+ F+S CG ++R+++ D +
Sbjct: 431 DRPSPGFNGNRKTSGNTVFVKGFDKYQEEDSIRESLTKHFKS-CGTIERVKIPTDRETGN 489
Query: 316 -TRIAFVEFAMVSEP 329
A++EF+ P
Sbjct: 490 IKGFAYIEFSTDGAP 504
>gi|302803765|ref|XP_002983635.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
gi|300148472|gb|EFJ15131.1| hypothetical protein SELMODRAFT_234317 [Selaginella moellendorffii]
Length = 573
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/179 (27%), Positives = 81/179 (45%), Gaps = 13/179 (7%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
K+++ +T + E +T++V +I VT+E LA F G+VV RI N F
Sbjct: 300 KQKLEVKTPAKEGGE--SKTLFVRNIPFSVTDEDLAQYFEDAGEVVGVRIAQGDNGPKGF 357
Query: 221 AFVEFTDEEGARAALSLAGTMLG---FYPVRVLPSKT-AIAPVNPTFLPRSEDEREMCSR 276
A VEF+ E A+ AL+ +G +G Y P T A P P R+
Sbjct: 358 AHVEFSTEAAAQKALNKSGQDMGGRRIYCDLANPRGTPASGPKRDRPSPGFNGNRKTSGN 417
Query: 277 TIYCTNIDKKVTQGDIK----LFFESVCGEVQRLRLLGDYQHS--TRIAFVEFAMVSEP 329
T++ DK + I+ F+S CG ++R+++ D + A++EF+ P
Sbjct: 418 TVFVKGFDKYQEEDSIRDSLTKHFKS-CGTIERVKIPTDRETGNIKGFAYIEFSTDGAP 475
>gi|317106694|dbj|BAJ53195.1| JHL03K20.4 [Jatropha curcas]
Length = 642
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 57/116 (49%), Gaps = 13/116 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
++ + ++YV D++Q VTE QL LF GQVV R+C D S L + +V + + A
Sbjct: 24 NQFVPTSLYVGDLEQNVTETQLYDLFNQHGQVVSIRVCRDLTSRRSLGYGYVNYNNVHDA 83
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
A+ + L F PV P + + +PT R+ + IY N+DK +
Sbjct: 84 AQAIEV----LNFTPVNGKPIRIMYSYRDPTI-------RKSGTGNIYIKNLDKAI 128
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D +T+++L LF G + C++ DPN V R + FV F T EE +RA +
Sbjct: 313 LYVKNLDDSITDDKLKELFSEFGTITSCKVMRDPNGVSRGSGFVAFSTAEEASRALTEMN 372
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 373 GKMVVSKPLYV 383
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
R + +D IR++ +Y+ ++D+ + + L F G ++ C++ D L +
Sbjct: 100 IRIMYSYRDPTIRKSGTGNIYIKNLDKAIDNKALHDTFSAFGSILSCKVATDSLGQSLGY 159
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV+F +EE A+ A+ L G +L V V P FL + E E + T
Sbjct: 160 GFVQFDNEESAKNAIDKLNGMLLNDKQVYVGP-----------FLRKQERESAIDKATFN 208
Query: 278 -IYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 209 NVYVKNLSETTTEEDLKKIF 228
>gi|51969240|dbj|BAD43312.1| putative protein [Arabidopsis thaliana]
Length = 597
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 225
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 279
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 280 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMVS 327
N+ T+ DI KLF + V V+ + + G+++ + F + V+
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVA 316
>gi|15233246|ref|NP_191094.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
gi|7019667|emb|CAB75768.1| putative protein [Arabidopsis thaliana]
gi|332645849|gb|AEE79370.1| phragmoplastin interacting protein 1 [Arabidopsis thaliana]
Length = 597
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/171 (26%), Positives = 82/171 (47%), Gaps = 15/171 (8%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 225
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 279
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 280 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAFVEFAMVS 327
N+ T+ DI KLF + V V+ + + G+++ + F + V+
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDFKDSVSVA 316
>gi|453087053|gb|EMF15094.1| splicing factor, CC1-like protein [Mycosphaerella populorum SO2202]
Length = 622
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/195 (26%), Positives = 81/195 (41%), Gaps = 34/195 (17%)
Query: 147 HTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVV 206
H + +R+ Y G +T DE RRTV+V + ++ +L F G VV
Sbjct: 204 HGSQSDRRHSYRGGDGGNKRKTPEPTDDERDRRTVFVQQLAARLRSRELRDFFEQVGPVV 263
Query: 207 DCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
D +I D S +VEF DEE + A+ L G L P+ IA +
Sbjct: 264 DAQIVKDRVSGRSKGVGYVEFKDEESVQKAIGLTGQKLLGIPI--------IAQL----- 310
Query: 265 PRSEDEREMCSRT---------------IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 309
+E E+ +RT +Y NI +T+ D+K FE GE++ +L
Sbjct: 311 --TEAEKNRQARTTEGTATQSNGVPFHRLYVGNIHFSITEADLKNVFEPF-GELEFAQLQ 367
Query: 310 GDYQHSTR-IAFVEF 323
+ ++ FV+F
Sbjct: 368 KEENGRSKGYGFVQF 382
>gi|297851860|ref|XP_002893811.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
gi|297339653|gb|EFH70070.1| PAB1 binding protein 1 [Arabidopsis lyrata subsp. lyrata]
Length = 403
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 72/149 (48%), Gaps = 15/149 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
R V+V ++D+ + +QL+ +F G+V+ C++ D + V + + FV+F E A +
Sbjct: 30 RGNVFVKNLDESIDNKQLSDMFSAFGKVLSCKVVRDASGVSKGYGFVQFYSELSVNIACN 89
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
+ GT++ + V P F+ R + + +Y N+ + T D+K+
Sbjct: 90 VRNGTLIRNQHIHVSP-----------FVSRRQWDESRVFTNVYVKNLAETTTDDDLKMI 138
Query: 296 FESVCGEVQRLRLLGDYQHSTRI-AFVEF 323
FE GE+ ++ D + +R+ FV F
Sbjct: 139 FEEF-GEITSAVVMKDKEGKSRMFGFVNF 166
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D V +L LF G ++ C++ PN + + FVEF T EE ++A L +
Sbjct: 225 LYVKNLDYSVDNTKLQELFSEFGTIISCKVMVHPNRISKGVGFVEFSTSEEASKAMLKMN 284
Query: 239 GTMLGFYPVRV 249
G ++G P+ V
Sbjct: 285 GKVVGNKPIYV 295
>gi|195029531|ref|XP_001987626.1| GH22019 [Drosophila grimshawi]
gi|193903626|gb|EDW02493.1| GH22019 [Drosophila grimshawi]
Length = 304
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D R + FV F EE ARAA+
Sbjct: 112 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 171
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 172 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 220
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +L+ D + S R FV F
Sbjct: 221 EPY-GRITSHKLMLDEEGRSRRFGFVAF 247
>gi|242020567|ref|XP_002430724.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212515914|gb|EEB17986.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 470
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 43/85 (50%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
IRRTV ++++D+ + + + LF G+V R C P +A VEFTD+ AAL
Sbjct: 151 IRRTVVITNLDRSIGSQNVIELFSKAGEVKYVRFCFRPGDTANYALVEFTDQTSIIAALK 210
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNP 261
+ G L ++V S AI P
Sbjct: 211 MNGMQLAGNTIKVYHSIQAIVKPQP 235
>gi|322694933|gb|EFY86751.1| RNA splicing factor Pad-1 [Metarhizium acridum CQMa 102]
Length = 562
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/182 (28%), Positives = 78/182 (42%), Gaps = 32/182 (17%)
Query: 158 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRIC 211
S G+R R+ +DE RTV+V + ++ ++L F + Q+V RI
Sbjct: 159 SPGRR---SRSPQLNEDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRIS 215
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPT 262
G V +VEF DEE + AL L G L P+ V ++ T NP
Sbjct: 216 GRSKGV---GYVEFKDEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPN 272
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFV 321
+P +Y NI VT+ D++ FE GE++ ++L D +R FV
Sbjct: 273 SVP---------FHRLYVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFV 322
Query: 322 EF 323
+F
Sbjct: 323 QF 324
>gi|242076392|ref|XP_002448132.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
gi|241939315|gb|EES12460.1| hypothetical protein SORBIDRAFT_06g021850 [Sorghum bicolor]
Length = 664
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 57/122 (46%), Gaps = 15/122 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 236
++YV D++ V++ QL LF GQVV R+C D S L +A+V F++ + ARA
Sbjct: 47 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFSNPLDAARALEV 106
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L +L P+RV+ S R R S I+ N+DK + + F
Sbjct: 107 LNFAVLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 154
Query: 297 ES 298
S
Sbjct: 155 SS 156
Score = 37.7 bits (86), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 52/116 (44%), Gaps = 15/116 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ +Y+ ++D + ++QL LF G++ ++ D N + +
Sbjct: 311 KRRFEQSLKDAA-DKYQGLNLYLKNLDDSIGDDQLRELFSNFGKITSYKVMRDQNGLSKG 369
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 370 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAML 413
>gi|392595814|gb|EIW85137.1| polyadenylate binding protein [Coniophora puteana RWD-64-598 SS2]
Length = 683
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D+Q+ + L F+ G V+ C++ D + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFVAFGNVLSCKVATDEQGRSKGY 175
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 275
FV + E A A+ ML + K + P +PR E DE +
Sbjct: 176 GFVHYETAEAAETAIKAVNGML------LNDKKVYVGP----HIPRKERQSKLDEMKAQF 225
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N+D +VTQ + + F + + D S FV +
Sbjct: 226 TNLYIKNLDTEVTQEEFEELFNRYGSVTSAIVQVDDEGRSKGFGFVNY 273
>gi|320593519|gb|EFX05928.1| RNA splicing factor [Grosmannia clavigera kw1407]
Length = 610
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 71/165 (43%), Gaps = 24/165 (14%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 203 EDERDRRTVFVQQLAARLRTRELKDFFEKAGPVAEAQIVKDRVSNRSKGVGYVEFRSEES 262
Query: 231 ARAALSLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
AAL L G L PV +V + A + N T +P +Y
Sbjct: 263 VTAALQLTGQKLLGIPVIVQMTEAEKNRQVRSTAEATSNGNSTGVP---------FHRLY 313
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 314 VGNIHFSITESDLRNVFEPF-GELEFVQLQKDDTGRSRGYGFVQF 357
>gi|116309951|emb|CAH66982.1| H0714H04.9 [Oryza sativa Indica Group]
Length = 704
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 71/159 (44%), Gaps = 18/159 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 446 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 505
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 506 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 560
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFA 324
I+ E CGE+ R+ + DY+ S +A+++FA
Sbjct: 561 QIRNSLEEHFGSCGEITRVSIPRDYETGASKGMAYMDFA 599
>gi|427796107|gb|JAA63505.1| Putative transcriptional coactivator caper rrm superfamily, partial
[Rhipicephalus pulchellus]
Length = 505
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 3/82 (3%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL--RFAFVEFTDEEGARAAL 235
++TV+V ++ +V +E+L LF CG VV R+ D + + F FV F +GA AL
Sbjct: 341 KQTVFVGNLAHEVQDEELWKLFAECGDVVAVRLVRDKVTGMGKGFGFVTFKQMDGAALAL 400
Query: 236 SLAGTMLGFYPVRVLP-SKTAI 256
+ G + P+RV P SK A+
Sbjct: 401 EMTGREVSGRPIRVSPFSKQAV 422
>gi|195121744|ref|XP_002005379.1| GI19109 [Drosophila mojavensis]
gi|193910447|gb|EDW09314.1| GI19109 [Drosophila mojavensis]
Length = 300
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 108 IYIKNLERSIDNKAVYDTFSAFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 167
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 168 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 216
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +L+ D + S R FV F
Sbjct: 217 EPY-GRITSHKLMLDEEGRSRRFGFVAF 243
>gi|414588971|tpg|DAA39542.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 648
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEF 323
+ C G + ++ D +R FV+F
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQF 170
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGARAALS-LA 238
+Y+ ++++ + +E+L LF G + C++ D N V R + FV F E A AL+ +
Sbjct: 319 LYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMN 378
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 379 GKMVGSKPLYV 389
>gi|414588970|tpg|DAA39541.1| TPA: hypothetical protein ZEAMMB73_983793 [Zea mays]
Length = 654
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 19/149 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+ + V + QL +F G VV R+C D NS L +A+V + ++ A AL L
Sbjct: 36 SLYVGDLHESVQDAQLFDVFSQVGGVVSVRVCRDINSRKSLGYAYVNYNNQGDAARALEL 95
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 96 ----LNFTPINGKPIRIMYSNRDPS-------SRKSGTGNIFIKNLDKSI---DNKALYD 141
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEF 323
+ C G + ++ D +R FV+F
Sbjct: 142 TFCAFGNILSCKIATDPSGESRGYGFVQF 170
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGARAALS-LA 238
+Y+ ++++ + +E+L LF G + C++ D N V R + FV F E A AL+ +
Sbjct: 319 LYLKNLEENIDDEKLRELFAEYGNITSCKVMRDSNGVSRGSGFVAFKSAEDANRALTEMN 378
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 379 GKMVGSKPLYV 389
>gi|383863609|ref|XP_003707272.1| PREDICTED: nucleolysin TIAR-like [Megachile rotundata]
Length = 392
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+EE L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDSSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQC--A 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F SE
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKSE 149
>gi|320166417|gb|EFW43316.1| hypothetical protein CAOG_01360 [Capsaspora owczarzaki ATCC 30864]
Length = 986
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 84/199 (42%), Gaps = 18/199 (9%)
Query: 138 TDGTANTNGHTT------TRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVT 191
DG A NG T +R+R+ R +A TV+VS++D + T
Sbjct: 641 VDGGAEDNGLTALLSDARVKRQRDSDDAQAPRFTLPEKHAHDVSKDPVTVFVSNLDFKAT 700
Query: 192 EEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVL 250
EE + + F G +VD R+ P R + FVEF+ E A+ AL+L + P+ V
Sbjct: 701 EEMIRSQFEQIGNIVDVRLVRKPTGRSRGYGFVEFSSPEAAQKALALDRQPVLNRPMYVS 760
Query: 251 PS----KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQ-R 305
PS K P + D +T++ N+ + D+ FE V R
Sbjct: 761 PSVDKPKDGDGPAPSRYAQDGVD-----PKTLFVRNLSSLCRRDDLVTTFEKFAKVVDVR 815
Query: 306 LRLLGDYQHSTRIAFVEFA 324
+ D + + R A+VEFA
Sbjct: 816 MTRHRDGRFTGR-AYVEFA 833
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF---AFVEF 225
S QD V +T++V ++ + L T F +VVD R+ + RF A+VEF
Sbjct: 775 SRYAQDGVDPKTLFVRNLSSLCRRDDLVTTFEKFAKVVDVRMTRHRDG--RFTGRAYVEF 832
Query: 226 TDEEGARAALSLAGTMLGFYPV 247
+EE A+ AL+ GT++ P+
Sbjct: 833 ANEEDAKLALAADGTVVRGQPI 854
>gi|217074874|gb|ACJ85797.1| unknown [Medicago truncatula]
Length = 494
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 231
D+ +Y+ ++D VT+E+L+ LF G V C+I DP + R + FV F T EE
Sbjct: 301 DKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEAT 360
Query: 232 RAALSLAGTMLGFYPVRVLPSK 253
RA + G M+ P+ V P++
Sbjct: 361 RALAEMNGKMVAGKPLYVAPAQ 382
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEG 230
+++ ++YV D+D VT+ QL LF GQVV RIC D S L + +V F++ +
Sbjct: 19 NQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDA 78
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A+A L T L P+R++ S R R+ + I+ N+D+ +
Sbjct: 79 AKAMDVLNFTPLNNKPIRIMYSH------------RDPSVRKSGAANIFIKNLDRAI--- 123
Query: 291 DIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
D K ++ S+ G + ++ D ++ FV+F
Sbjct: 124 DHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQF 159
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 22/138 (15%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ +++ ++D+ + + L F G ++ C+I D + + + +
Sbjct: 95 IRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGY 154
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV+F +EE A++A+ L G +L PV V R +D S
Sbjct: 155 GFVQFENEESAQSAIDKLNGMLLNDKPVYV------------GHFQRKQDRDNALSNAKF 202
Query: 278 --IYCTNIDKKVTQGDIK 293
+Y N+ + VT D+K
Sbjct: 203 NNVYVKNLSESVTDDDLK 220
>gi|346466155|gb|AEO32922.1| hypothetical protein [Amblyomma maculatum]
Length = 502
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL--RFAFVEFTDEEGARAALSL 237
TV+V ++ +V +E+L T F CG V R+ D + + F FV F + +GA AL +
Sbjct: 338 TVFVGNLPHEVQDEELWTFFADCGDVTSVRLIRDKGTGMGKGFGFVTFKNRDGAALALEM 397
Query: 238 AGTMLGFYPVRVLP-SKTAIA 257
AG L PVRV SK A A
Sbjct: 398 AGRELCGRPVRVTEFSKQAAA 418
>gi|194886456|ref|XP_001976617.1| GG19920 [Drosophila erecta]
gi|190659804|gb|EDV57017.1| GG19920 [Drosophila erecta]
Length = 307
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +L+ D + S R FV +
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAY 250
>gi|125811664|ref|XP_001361971.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|195171077|ref|XP_002026337.1| GL20391 [Drosophila persimilis]
gi|54637147|gb|EAL26550.1| GA18301 [Drosophila pseudoobscura pseudoobscura]
gi|194111239|gb|EDW33282.1| GL20391 [Drosophila persimilis]
Length = 296
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 104 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 163
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 164 GMLCNNQKVHVV-----------KFIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 212
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +L+ D + S R FV F
Sbjct: 213 EPY-GRITSHKLMLDEEGRSRRFGFVAF 239
>gi|444316030|ref|XP_004178672.1| hypothetical protein TBLA_0B03120 [Tetrapisispora blattae CBS 6284]
gi|387511712|emb|CCH59153.1| hypothetical protein TBLA_0B03120 [Tetrapisispora blattae CBS 6284]
Length = 439
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 11/127 (8%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIR--RTVYVSDIDQQV-TEEQLATLFLTCGQVVDCRIC 211
+GY + N + D I+ R + V +ID ++ TEE L T FL CG++ + RI
Sbjct: 179 HGYKLVAKLSNPAMKQERSDSAIKEKREILVRNIDNELATEEILKTYFLVCGEIQNIRII 238
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTML--GFYPVRVLPSKTAIAPVNPTFLPRSED 269
N FAF+ F + E A A+ L + L G P+ + IA P +L R E
Sbjct: 239 SPNNKSNSFAFIIFLNAESAEKAIKLNNSYLKVGSNPISI-----TIAEQKP-YLERQEI 292
Query: 270 EREMCSR 276
+ + +R
Sbjct: 293 KSLLSAR 299
>gi|254567738|ref|XP_002490979.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|238030776|emb|CAY68699.1| Poly(A) binding protein, part of the 3'-end RNA-processing complex,
mediates interactions between th [Komagataella pastoris
GS115]
gi|328352488|emb|CCA38887.1| Polyadenylate-binding protein, cytoplasmic and nuclear
[Komagataella pastoris CBS 7435]
Length = 626
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/173 (24%), Positives = 83/173 (47%), Gaps = 24/173 (13%)
Query: 164 MNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
+ CR +Q+D +RR+ +++ ++D + + L F + G+V+ C++ D N +
Sbjct: 121 VRCRLMWSQRDPSLRRSGSGNIFIKNLDPAIENKTLHDTFSSFGKVLSCKVATDENGNSK 180
Query: 220 -FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE---REMC 274
F FV + +E A+AA+ ++ G +L + V P L + + E +EM
Sbjct: 181 GFGFVHYESDEAAQAAIENINGMLLNGREIYVGPH-----------LAKKDRESRFQEMI 229
Query: 275 SR--TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFA 324
++ N D + T+ +++ FES G + + L D + H+ FV FA
Sbjct: 230 KNYTNVFVKNFDTESTEDELRELFESY-GPITSIHLQVDSEGHNKGFGFVNFA 281
>gi|347967649|ref|XP_312633.5| AGAP002335-PA [Anopheles gambiae str. PEST]
gi|333468363|gb|EAA07505.5| AGAP002335-PA [Anopheles gambiae str. PEST]
Length = 458
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E +T+YV ++D VTEE L TLF G V C+I + S+ FAF+E+ + + A+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIRE-TSIDPFAFIEYANHQSAQT 61
Query: 234 ALS 236
AL+
Sbjct: 62 ALA 64
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 44/93 (47%), Gaps = 6/93 (6%)
Query: 163 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
R+N TS Q D ++V D+ ++ E L F G++ +CRI DP ++
Sbjct: 77 RVNWATSAGNQPKTDTSQHHHIFVGDLSPEIDTETLREAFAPFGEISNCRIVRDPQTLKS 136
Query: 220 --FAFVEFTDEEGARAALSLA-GTMLGFYPVRV 249
+AFV F + A A+++ G LG +R
Sbjct: 137 RGYAFVSFVKKAEAENAIAMMNGQWLGSRSIRT 169
>gi|224060514|ref|XP_002300227.1| predicted protein [Populus trichocarpa]
gi|222847485|gb|EEE85032.1| predicted protein [Populus trichocarpa]
Length = 644
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 13/113 (11%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 234
+ ++YV D++ VT+ QL LF GQVV R+C D S L + +V +++ + A A
Sbjct: 23 VTTSLYVGDLEASVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARA 82
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L ML F P+ P + + +PT R+ + I+ N+DK +
Sbjct: 83 LE----MLNFTPLNGSPIRVMYSHRDPTI-------RKSGAGNIFIKNLDKAI 124
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +E+L LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 309 LYIKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 368
Query: 239 GTMLGFYPVRV 249
G ++ P+ V
Sbjct: 369 GKIVVSKPLYV 379
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F G ++ C++ DP+ + +
Sbjct: 96 IRVMYSHRDPTIRKSGAGNIFIKNLDKAIDHKALHDTFSAFGNILSCKVATDPSGQSKGY 155
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER---EMCSR 276
FV+F EE A+ A+ L G +L V V P FL + E + +M
Sbjct: 156 GFVQFDSEEAAQKAIEKLNGMLLNDKQVYVGP-----------FLRKQERDTATDKMRFN 204
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
++ N+ + T+ D+ F
Sbjct: 205 NVFVKNLSETTTEEDLNKTF 224
>gi|18026763|gb|AAL55607.1|AF196776_1 phragmoplastin-interacting protein PHIP1 [Arabidopsis thaliana]
Length = 597
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 79/164 (48%), Gaps = 15/164 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEF 225
T N ++D V+ +YV I Q TE+++ + F +CG + VDC++ + + AF+ F
Sbjct: 150 TDNKEEDGVVPNKLYVGGIPYQSTEDEIRSYFRSCGVIIKVDCKMRPEDGAFSGIAFITF 209
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER----EMCS--RTIY 279
E+GA+ AL+ +G R L + + P+ +PR + EM +Y
Sbjct: 210 DTEDGAKRALAFDRAAMGD---RYLTIQQYVKTTTPS-IPRRKTSSGFAPEMVDGYNRVY 265
Query: 280 CTNIDKKVTQGDI-KLFFESVCGEVQ--RLRLLGDYQHSTRIAF 320
N+ T+ DI KLF + V V+ + + G+++ + F
Sbjct: 266 IGNLAWDTTERDIRKLFSDCVINSVRLGKNKETGEFKGYAHVDF 309
>gi|451845251|gb|EMD58564.1| hypothetical protein COCSADRAFT_103344 [Cochliobolus sativus
ND90Pr]
Length = 569
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 71/176 (40%), Gaps = 13/176 (7%)
Query: 160 GKRRMNCRTSN------AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
G R N R +N +D+ +RT++V I Q+ L F G VV+ +I D
Sbjct: 150 GDERRNSRRNNTPPEPEVTEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKD 209
Query: 214 --PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDE 270
+VEF DEE AL L G L P+ L P+ +
Sbjct: 210 RVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGA 269
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEF 323
+Y NI VT+ D++ FE GE++++ L D + R FV+F
Sbjct: 270 NGAPFHRLYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNPGRSKGYGFVQF 324
>gi|195383760|ref|XP_002050594.1| GJ22239 [Drosophila virilis]
gi|194145391|gb|EDW61787.1| GJ22239 [Drosophila virilis]
Length = 301
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 69/148 (46%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D R + FV F EE ARAA+
Sbjct: 109 IYIKNLERSIDNKAVYETFSVFGNILNCNVAKDEEGNSRGYGFVHFDSEEAARAAIEKVN 168
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 169 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 217
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +L+ D + S R FV F
Sbjct: 218 EPY-GRITSHKLMLDEEGRSRRFGFVAF 244
>gi|193648018|ref|XP_001950341.1| PREDICTED: nucleolysin TIAR-like [Acyrthosiphon pisum]
Length = 388
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 69/157 (43%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE RT+YV ++D VTEE L LF G V C++ +P S +AF+EF GA
Sbjct: 3 DESNPRTLYVGNLDPSVTEELLCALFTNIGPVNACKVIREPGSD-PYAFLEFDTHSGAAT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A P N L S I+ ++ ++ +K
Sbjct: 62 ALAAMNGRL--FLDKEMKVNWATTPGNQPKLDTSNHYH------IFVGDLSPEIETHTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F S+
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSD 149
>gi|357465579|ref|XP_003603074.1| Poly(A)-binding protein [Medicago truncatula]
gi|355492122|gb|AES73325.1| Poly(A)-binding protein [Medicago truncatula]
Length = 622
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 45/82 (54%), Gaps = 2/82 (2%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGA 231
D+ +Y+ ++D VT+E+L+ LF G V C+I DP + R + FV F T EE
Sbjct: 301 DKFYGANLYLKNLDDSVTDEKLSELFSEFGTVTSCKILRDPQGISRGSGFVAFSTPEEAT 360
Query: 232 RAALSLAGTMLGFYPVRVLPSK 253
RA + G M+ P+ V P++
Sbjct: 361 RALAEMNGKMVAGKPLYVAPAQ 382
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 21/156 (13%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEG 230
+++ ++YV D+D VT+ QL LF GQVV RIC D S L + +V F++ +
Sbjct: 19 NQLTTTSLYVGDLDHDVTDSQLYDLFNQIGQVVSVRICRDLASQQSLGYGYVNFSNPHDA 78
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A+A L T L P+R++ S R R+ + I+ N+D+ +
Sbjct: 79 AKAMDVLNFTPLNNKPIRIMYSH------------RDPSVRKSGAANIFIKNLDRAI--- 123
Query: 291 DIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
D K ++ S+ G + ++ D ++ FV+F
Sbjct: 124 DHKALYDTFSIFGNILSCKIAMDASGLSKGYGFVQF 159
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 22/138 (15%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ +++ ++D+ + + L F G ++ C+I D + + + +
Sbjct: 95 IRIMYSHRDPSVRKSGAANIFIKNLDRAIDHKALYDTFSIFGNILSCKIAMDASGLSKGY 154
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV+F +EE A++A+ L G +L PV V R +D S
Sbjct: 155 GFVQFENEESAQSAIDKLNGMLLNDKPVYV------------GHFQRKQDRDNALSNAKF 202
Query: 278 --IYCTNIDKKVTQGDIK 293
+Y N+ + VT D+K
Sbjct: 203 NNVYVKNLSESVTDDDLK 220
>gi|268570897|ref|XP_002640866.1| Hypothetical protein CBG15757 [Caenorhabditis briggsae]
Length = 296
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 43/84 (51%), Gaps = 6/84 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RTVYV++I +VTE+ L LFL G +V +S RFA VEF DEE A+ +
Sbjct: 10 RTVYVANITPEVTEDMLEELFLQAGPLVKVITRNVRDSTARFALVEFEDEESVIFAIKI- 68
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPT 262
+ +R+ + + P N T
Sbjct: 69 -----LHGIRLFDREIQVKPRNNT 87
>gi|302142286|emb|CBI19489.3| unnamed protein product [Vitis vinifera]
Length = 621
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + +V +++ + A AL L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F P+ P + + +P+ R+ + I+ N+DK +
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSI 117
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 362 GKMVVSKPLYV 372
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F G ++ C+I DP+ + +
Sbjct: 89 IRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGY 148
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A+ A+ L G ++ V V FL + E E +
Sbjct: 149 GFVQFDNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFN 197
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 198 NVYVKNLSESTTEEDLKNIF 217
>gi|115459296|ref|NP_001053248.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|32490269|emb|CAE05558.1| OSJNBb0116K07.11 [Oryza sativa Japonica Group]
gi|113564819|dbj|BAF15162.1| Os04g0504800 [Oryza sativa Japonica Group]
gi|215695125|dbj|BAG90316.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 659
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 236
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L L F P+ P + + +P+ R S I+ N+DK +
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAI 138
Score = 44.3 bits (103), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ +Y+ ++D + ++QL LF G++ C+I D N V +
Sbjct: 304 KRRFEQSMKDAA-DKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKG 362
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 363 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAML 406
>gi|356576979|ref|XP_003556607.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Glycine max]
Length = 248
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 10/160 (6%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
N Y + +R+ + ++ +T+YV ++ +V + + LF CG++VD R+ +
Sbjct: 42 NSYWESSKRV----ATLKEQNAPPKTIYVRNLSYRVEQADMENLFKECGKIVDVRLHRNH 97
Query: 215 NSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDERE 272
N L F VEF E A+ AL L T L P+ V L + + + S + E
Sbjct: 98 NGRLNGFGQVEFATAEAAKKALELHNTELLRRPIGVDLAEEKGEYTYSRSNWSNSFQKCE 157
Query: 273 MC-SRTIYCTNIDKKVTQGDIKLFFES---VCGEVQRLRL 308
S T++ T D + +K E CGE+QR+ +
Sbjct: 158 RAQSPTVFVTGFDSSLPAEKLKASLEEHFGSCGEIQRISI 197
>gi|291231285|ref|XP_002735593.1| PREDICTED: TIA-1 related protein-like [Saccoglossus kowalevskii]
Length = 409
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 68/152 (44%), Gaps = 12/152 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
D+ + RT+YV ++D+QVTE + LF G C++ + + FVEF + A A
Sbjct: 9 DDALPRTLYVGNLDRQVTEAFILQLFGQIGPCKSCKMIAEHGGNDPYCFVEFVEHSHAAA 68
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL TM G R++ K VN P S + ++ ++ +V D+K
Sbjct: 69 ALQ---TMNG----RMILGKEVK--VNWATTPSSMKKDTSNHHHVFVGDLSSEVDTPDLK 119
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
F G++ R++ D Q S FV F
Sbjct: 120 AAFAPF-GQISDARVVKDLQTNKSKGYGFVSF 150
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 40/164 (24%), Positives = 68/164 (41%), Gaps = 14/164 (8%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFT 226
S+ ++D V+V D+ +V L F GQ+ D R+ D N + FV F
Sbjct: 92 SSMKKDTSNHHHVFVGDLSSEVDTPDLKAAFAPFGQISDARVVKDLQTNKSKGYGFVSFL 151
Query: 227 DEEGARAALS-LAGTMLGFYPVRV-LPSKTAIAPVNP-TFLPRSEDE----REMCSRTIY 279
++ A A+ + G L +R ++ P P T S D+ + T+Y
Sbjct: 152 NKVDAENAIQGMNGQWLSGRAIRTNWATRKPPPPRQPETTKQLSYDDVCNSSSYTNTTVY 211
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ +T+G ++ F S G +Q +R+ D AF+ F
Sbjct: 212 IGGVTTGLTEGKMRETF-SHYGHIQEVRIFPD----KGYAFIRF 250
>gi|225458678|ref|XP_002284923.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|147773643|emb|CAN76464.1| hypothetical protein VITISV_017035 [Vitis vinifera]
Length = 640
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 57/110 (51%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D +T+ QL LF+ GQV+ R+C D ++ L + +V +++ + A AL L
Sbjct: 19 SLYVGDLDVNITDSQLYDLFIQAGQVLSVRVCRDLSTRRSLGYGYVNYSNPQDAARALDL 78
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F P+ P + + +P+ R+ + I+ N+DK +
Sbjct: 79 ----LNFTPLNGKPIRIMYSHRDPSI-------RKSGTANIFIKNLDKSI 117
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 302 LYIKNLDDSIGDDKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALTEMN 361
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 362 GKMVVSKPLYV 372
Score = 43.1 bits (100), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/140 (23%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F G ++ C+I DP+ + +
Sbjct: 89 IRIMYSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFSAFGNILSCKIATDPSGQSKGY 148
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A+ A+ L G ++ V V FL + E E +
Sbjct: 149 GFVQFDNEESAQNAIDKLNGMLINDKQVYV-----------GQFLRKQERETALNKTKFN 197
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 198 NVYVKNLSESTTEEDLKNIF 217
>gi|452002199|gb|EMD94657.1| hypothetical protein COCHEDRAFT_1092247 [Cochliobolus
heterostrophus C5]
Length = 572
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/187 (27%), Positives = 74/187 (39%), Gaps = 35/187 (18%)
Query: 160 GKRRMNCRTSNA------QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
G R N R +N +D+ +RT++V I Q+ L F G VV+ +I D
Sbjct: 153 GDERRNSRRNNTPPEPEITEDDRDKRTIFVQQISQRAETRHLRAFFERVGPVVEAQIVKD 212
Query: 214 --PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV-----------RVLPSKTAIAP-V 259
+VEF DEE AL L G L P+ PS+ AP
Sbjct: 213 RVTGRSKGVGYVEFKDEESVPQALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGTAPGA 272
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-- 317
N R +Y NI VT+ D++ FE GE++++ L D + R
Sbjct: 273 NGAPFHR-----------LYVGNIHFSVTEKDLQEIFEPF-GELEQVILQRDEMNPGRSK 320
Query: 318 -IAFVEF 323
FV+F
Sbjct: 321 GYGFVQF 327
>gi|326503120|dbj|BAJ99185.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 724
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-GDPNSVLRFAFVEFTDEEGARAALSL 237
+T++V ++ V +++ F G+V D R D S FA VEF E A+ A L
Sbjct: 465 KTLFVGNLSYNVENDEVKQFFGEAGEVSDIRFATADDGSFKGFAHVEFATTEAAQKAYEL 524
Query: 238 AGTMLGFYPVRV--LPSKTAIAPV----NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
G L PVR+ + AI P N +F ++ S T + D + + +
Sbjct: 525 NGHDLSGRPVRLDFARERGAITPGSGRDNSSF------KKSGQSNTAFVRGFDSSLGEDE 578
Query: 292 IKLFFE---SVCGEVQRLRLLGDYQHSTR--IAFVEF 323
I+ + S CG + R+ + DY+ T IA+VEF
Sbjct: 579 IRSSLQEHFSSCGAIGRVSIPKDYETGTSKGIAYVEF 615
>gi|91086169|ref|XP_970456.1| PREDICTED: similar to TIA-1 homolog [Tribolium castaneum]
gi|270010230|gb|EFA06678.1| hypothetical protein TcasGA2_TC009608 [Tribolium castaneum]
Length = 364
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 74/157 (47%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L TLF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 DESHPKTLYVGNLDPSVSEDLLCTLFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLDKEMKVNWATSPGN---QPKQDTSNH---HHIFVGDLSPEIETETLR 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F +E
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAE 149
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/178 (26%), Positives = 80/178 (44%), Gaps = 22/178 (12%)
Query: 163 RMNCRTS---NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS +QD ++V D+ ++ E L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKQDTSNHHHIFVGDLSPEIETETLREAFAPFGEISNCRIVRDPQTLKS 136
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGFYPVRV-------LPSKTAIA---PVNPTFLPR 266
+AFV F + A A+ ++ G LG +R P KT A PTF
Sbjct: 137 KGYAFVSFVKKAEAENAIQAMNGQWLGSRSIRTNWSTRKPPPPKTEKAAQRAKQPTF-DE 195
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
++ + T+YC +T+ ++ F S G +Q +R+ D + AF++FA
Sbjct: 196 VYNQSSPTNCTVYCGGFTTGLTEDLMQKTF-SQFGVIQDIRVFKDKGY----AFIKFA 248
>gi|226469236|emb|CAX70097.1| RNA-binding protein 39 [Schistosoma japonicum]
Length = 463
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 70/137 (51%), Gaps = 7/137 (5%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E A+ AL
Sbjct: 104 RTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVESAQLAL 162
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L GT L P+++ S V+ T LPR + + + +Y ++ +T+ +K
Sbjct: 163 GLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNKGPMK-LYIGSLHYNITEEMLKG 221
Query: 295 FFESVCGEVQRLRLLGD 311
FE G+++ ++L+ D
Sbjct: 222 IFEPF-GKIEDIKLIKD 237
>gi|70663933|emb|CAE02947.3| OSJNBa0014K14.19 [Oryza sativa Japonica Group]
Length = 657
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 236
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L L F P+ P + + +P+ R S I+ N+DK +
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAI 138
>gi|116790996|gb|ABK25816.1| unknown [Picea sitchensis]
Length = 248
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 73/151 (48%), Gaps = 9/151 (5%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RRKR ++ + ++ +Q E+ RR +YV +I + T E+LA +F CG V +
Sbjct: 46 RRKRVFSTKAQVQVQEAVQGGKQKEIERR-LYVGNIPRTSTNEELAKIFGECGNVEKAEV 104
Query: 211 CGDPNS--VLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
D + RFAFV + E A+AA+ + GT +G RV+ P++ + L R
Sbjct: 105 MYDKYTKRSRRFAFVTMSTVEDAQAAIEKMNGTEIGG---RVIKVNITEKPLDVSGLNRL 161
Query: 268 EDEREMCSR--TIYCTNIDKKVTQGDIKLFF 296
+E E +Y N+ K VT +K F
Sbjct: 162 TEEAEFIDSPYKVYVGNLAKAVTTETLKKKF 192
>gi|331219745|ref|XP_003322549.1| hypothetical protein PGTG_04086 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 680
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ + +E + + F G + D R S RF +++FT A AAL
Sbjct: 320 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 379
Query: 237 LAGTMLGFYPVRVLPS-KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + + V P K ++ +PT ++ + + +Y T + K V + D++
Sbjct: 380 L-------HNLEVSPKQKMSVLISDPT-RKQTRSDNHANEKELYITCLSKYVQEDDLRKL 431
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F S GE++ +R++ D HS AFVEF
Sbjct: 432 F-SQFGEIKGVRVVLDQAGHSKGFAFVEF 459
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+ +Y++ + + V E+ L LF G++ R+ D + FAFVEF +E A+AALS+
Sbjct: 412 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSM 471
Query: 238 AGTMLGFYPVRVLPSKT---AIAPVNPTF-----LPRSEDEREMCSRTIYCTNIDKKVTQ 289
L + V S ++A N TF L + D R SR++ +NI + +
Sbjct: 472 NNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR---SRSVRVSNIAEGTQE 528
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
I+ FE G+V + + A VEFA+
Sbjct: 529 ALIQQAFEQF-GKVLKTITYPEKNE----ALVEFAL 559
>gi|218195166|gb|EEC77593.1| hypothetical protein OsI_16552 [Oryza sativa Indica Group]
Length = 659
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 13/111 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALS 236
+++YV D++ VT+ QL LF GQV+ R+C D +S L +A+V F + A AL
Sbjct: 39 QSLYVGDLEASVTDSQLYELFSQAGQVMSVRVCRDISSRRSLGYAYVNFNNPVDAARALE 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L L F P+ P + + +P+ R S I+ N+DK +
Sbjct: 99 L----LNFAPLNGKPIRVMYSNRDPS-------SRRSGSANIFIKNLDKAI 138
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 53/116 (45%), Gaps = 15/116 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ +Y+ ++D + ++QL LF G++ C+I D N V +
Sbjct: 304 KRRFEQSMKDAA-DKYQGLNLYMKNLDDSIGDDQLCELFSNYGKITSCKIMRDANGVSKG 362
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 363 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKVML 406
>gi|297832034|ref|XP_002883899.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
gi|297329739|gb|EFH60158.1| hypothetical protein ARALYDRAFT_899764 [Arabidopsis lyrata subsp.
lyrata]
Length = 655
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/137 (30%), Positives = 64/137 (46%), Gaps = 12/137 (8%)
Query: 125 PNGFGYTN--NFIMHTDGTANTNGHTTTRRKR-NGYSQGK--RRMNCRTSNAQQ-----D 174
P GFG+ N N + NG T ++ G +Q K R M + Q D
Sbjct: 258 PKGFGFVNFENADDAAKAVESLNGKTFDDKEWFVGRAQKKSEREMELKVQYEQSLKEAAD 317
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGAR 232
+ +YV ++D V++E+L LF G V C++ DPN + R + FV F T EE +
Sbjct: 318 KFQSSNLYVKNLDDSVSDEKLKELFTPYGTVTSCKVMRDPNGMSRGSGFVAFSTPEEATK 377
Query: 233 AALSLAGTMLGFYPVRV 249
A ++G M+ P+ V
Sbjct: 378 AMSEMSGKMIENKPLYV 394
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D+D VT+ QL F GQVV R+C D L + +V FT ++ ARA
Sbjct: 41 SLYVGDLDPNVTDSQLFDAFSQMGQVVSVRVCRDLATRRSLGYGYVNFTSPQDAARAIQE 100
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L PVRV+ S R R + I+ N+DK + + F
Sbjct: 101 LNYIPLNGKPVRVMYSH------------RDPSVRRSGAGNIFIKNLDKSIDHKALHDTF 148
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
SV G + ++ D S FV++
Sbjct: 149 -SVFGNIISCKVAVDSSGQSKGYGFVQY 175
>gi|292616346|ref|XP_002662984.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
gi|292616348|ref|XP_002662985.1| PREDICTED: polyadenylate-binding protein 2-B-like [Danio rerio]
Length = 163
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGAR 232
RR++YV ++D T ++L F +CG V R G P FA++EF+D E R
Sbjct: 36 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 92
Query: 233 AALSLAGTMLGFYPVRVLPSKTAI 256
A++L T+ ++V P +T I
Sbjct: 93 TAMALDETLFRGRVIKVSPKRTNI 116
>gi|115477976|ref|NP_001062583.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|46389987|dbj|BAD16229.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|113630816|dbj|BAF24497.1| Os09g0115400 [Oryza sativa Japonica Group]
gi|125562753|gb|EAZ08133.1| hypothetical protein OsI_30396 [Oryza sativa Indica Group]
gi|125604734|gb|EAZ43770.1| hypothetical protein OsJ_28392 [Oryza sativa Japonica Group]
gi|169244485|gb|ACA50516.1| poly(A)-binding protein [Oryza sativa Japonica Group]
gi|215695451|dbj|BAG90618.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 662
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 59/123 (47%), Gaps = 16/123 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V ++ A AL
Sbjct: 41 SLYVGDLDVSVQDAQLFDVFAQVGGVVSVRVCRDVNTRRSLGYAYVNYSSPADAARALE- 99
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 100 ---MLNFTPINGKPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 146
Query: 298 SVC 300
+ C
Sbjct: 147 TFC 149
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D V +++L LF G + C++ D N V R + FV F + E+ +RA +
Sbjct: 324 LYLKNLDDSVDDDKLRELFAEYGTITSCKVMRDSNGVSRGSGFVAFKSAEDASRALAEMN 383
Query: 239 GTMLGFYPVRV 249
M+G P+ V
Sbjct: 384 SKMVGSKPLYV 394
>gi|389744282|gb|EIM85465.1| RNA-binding domain-containing protein [Stereum hirsutum FP-91666
SS1]
Length = 564
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 89/202 (44%), Gaps = 20/202 (9%)
Query: 135 IMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNA-------QQDEVIRRTVYVSDID 187
+ DGTA TNG +RK + ++ +A DE + T++V +
Sbjct: 254 VEMADGTAKTNG----KRKAEAEAPAPKKQKLTNGDAVSAPVPASNDEAVT-TIFVGRLS 308
Query: 188 QQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFY 245
V + L + F CG+VV R+ D N+ F +VEFT + AAL L G +
Sbjct: 309 WNVDNDWLKSEFEECGEVVSARVQMDRNTGKSRGFGYVEFTSPDAVEAALKLTGKEIDGR 368
Query: 246 PVRVLPSKTAIA--PVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
P+ V S T ++ V + D++ S T++ N+ ++ + F S G+V
Sbjct: 369 PINVDKS-TGVSKDKVRDSRAKAFGDQKSEPSSTLFVGNLSFSASEDVLWEAFAS-YGDV 426
Query: 304 QRLRLLGDYQ--HSTRIAFVEF 323
+ +R+ D + A+V+F
Sbjct: 427 KGVRMPTDRETGQPKGFAYVDF 448
>gi|110756942|ref|XP_395357.3| PREDICTED: nucleolysin TIAR [Apis mellifera]
gi|340713958|ref|XP_003395500.1| PREDICTED: nucleolysin TIAR-like [Bombus terrestris]
gi|350421173|ref|XP_003492759.1| PREDICTED: nucleolysin TIAR-like [Bombus impatiens]
gi|380025693|ref|XP_003696603.1| PREDICTED: nucleolysin TIAR-like [Apis florea]
Length = 392
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+EE L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEELLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQC--A 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLNKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F SE
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKSE 149
>gi|406866575|gb|EKD19615.1| RNA splicing factor [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 587
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 84/182 (46%), Gaps = 15/182 (8%)
Query: 151 RRKRNGYSQGKRRMNCRTSNA-QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----Q 204
RR RN + R T+ +DE RRTV+V + ++ ++L F G Q
Sbjct: 163 RRTRNEGRRASRSPKRETTPPLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQ 222
Query: 205 VVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPT 262
+V R+ G V +VEF +EE AA+ L G L P+ ++ ++ NP
Sbjct: 223 IVKDRVSGRSKGV---GYVEFKNEESVPAAIQLTGQKLLGIPIIAQLTEAEKNRQVRNPE 279
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFV 321
S + ++ +Y NI +T+ D++ FE GE++ ++L + Q +R FV
Sbjct: 280 AT--SSNPNQIPFHRLYVGNIHFSITESDLQNVFEPF-GELEFVQLQKEEQGRSRGYGFV 336
Query: 322 EF 323
+F
Sbjct: 337 QF 338
>gi|157114083|ref|XP_001657973.1| nucleolysin tia-1 [Aedes aegypti]
gi|108877443|gb|EAT41668.1| AAEL006710-PA [Aedes aegypti]
Length = 453
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 76/157 (48%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E +T+YV ++DQ VTE+ L LF G V C+I + +S +AF+E+ + + A+
Sbjct: 3 EEAYPKTLYVGNLDQSVTEDLLCALFGQMGAVKSCKIIREASSD-PYAFIEYANHQSAQT 61
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
AL+ L + + + A +P N P+++ + I+ ++ ++ ++
Sbjct: 62 ALAAMNKRL--FLKKEIKVNWATSPGN---QPKTDTSQH---HHIFVGDLSPEIETETLR 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F +E
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFVKKAE 149
>gi|328769593|gb|EGF79636.1| hypothetical protein BATDEDRAFT_19718 [Batrachochytrium
dendrobatidis JAM81]
Length = 431
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 67/146 (45%), Gaps = 4/146 (2%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 225
T + +E + TV+V ++ V EE LA F CG V RI D + F +V F
Sbjct: 172 TKKPKTEEPVNSTVFVGNLSWNVDEEMLAATFADCGTVESARIITDKETGRAKGFGYVTF 231
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
+ AA++L GT L +RV S T P + R E + + T++ N+
Sbjct: 232 ESADALTAAMALTGTELDGREIRVDVS-TPKPPRDGNRQGRKEAPQSAPTTTLFLGNLSF 290
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGD 311
VT+ +I+ F S G++ +R D
Sbjct: 291 NVTEDEIRESF-SQYGQLVSVRFPTD 315
>gi|391330636|ref|XP_003739762.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 364
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 73/154 (47%), Gaps = 11/154 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 232
QD RT+YV ++D VTE+ + LF GQ+ C+I +P S + FVEF + A
Sbjct: 7 QDGGQPRTLYVGNLDSGVTEDLVCALFSQMGQIKGCKIIHEPGSD-PYCFVEFVNHSDAS 65
Query: 233 AAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
+A+ ++ M +RV + +AI P R + + I+ ++ ++ D
Sbjct: 66 SAITAMNARMCLGRELRVNWASSAIQQQTPH---RPDTSKH---HHIFVGDLSPQIETSD 119
Query: 292 IKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEF 323
++ F S GE+ R++ D Q S FV F
Sbjct: 120 LREAF-SPFGEISDCRVVKDATTQKSKGYGFVSF 152
>gi|297741250|emb|CBI32381.3| unnamed protein product [Vitis vinifera]
Length = 766
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 54/111 (48%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGARAALS 236
++YV D+D VT+ QL LF QVV R+C D + L + +V +TD E+ ARA
Sbjct: 170 SLYVGDLDLNVTDSQLHDLFSQLAQVVSIRVCRDSTTHRSLGYGYVNYTDLEDAARALDV 229
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L T L P+R++ S R R+ + I+ N+DK +
Sbjct: 230 LNFTPLNGKPIRIMYSH------------RDPSIRKSGTGNIFIKNLDKGI 268
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DPN + R + FV F+ EE +RA +
Sbjct: 453 LYIKNLDDSIGDDKLKELFAQFGTITSCKVMRDPNGLSRGSGFVAFSSPEEASRALAEMN 512
Query: 239 GTMLGFYPVRV 249
M+ P+ V
Sbjct: 513 SKMVVSKPLYV 523
>gi|346327401|gb|EGX96997.1| RNA splicing factor (Pad-1), putative [Cordyceps militaris CM01]
Length = 545
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 48/170 (28%), Positives = 74/170 (43%), Gaps = 10/170 (5%)
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-----LTCGQVVDCRICGDP 214
G R T +DE RRTV+V + ++ +L F +T Q+V RI G
Sbjct: 140 GPRDKQDATPVLNEDERDRRTVFVQQLAARLRSRELKAFFEKVGPVTEAQIVKDRISGRS 199
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
V +VEF +E+ AL L G L PV V ++ T P +
Sbjct: 200 KGV---GYVEFKNEDSVAPALQLTGQKLLGIPVIVQVTEAEKNRQARTTEPGGSHPNHVP 256
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI VT+ D++ F+ GE++ ++L D + +R FV+F
Sbjct: 257 FHRLYVGNIHFNVTEQDLQAVFDPF-GELEFVQLQKDETNRSRGYGFVQF 305
>gi|242021493|ref|XP_002431179.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
gi|212516428|gb|EEB18441.1| nucleolysin TIA-1, putative [Pediculus humanus corporis]
Length = 403
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/158 (28%), Positives = 75/158 (47%), Gaps = 14/158 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E +T+YV ++D VTE+ L TLF G V C+I +PN+ +AFVEF + + A
Sbjct: 5 EENYPKTLYVGNLDVSVTEDLLCTLFSQIGSVKGCKIIREPNND-PYAFVEFVNHQAAST 63
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL + VL + VN P ++ +++ S I+ ++ ++ +
Sbjct: 64 AL------IAMNKRHVLEKEIK---VNWATSPGNQPKQDTSSHHHIFVGDLSPEIEMHTL 114
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
+ F GE+ R++ D Q S AFV F +E
Sbjct: 115 REAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKAE 151
>gi|385305500|gb|EIF49466.1| pub1p [Dekkera bruxellensis AWRI1499]
Length = 489
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/133 (27%), Positives = 64/133 (48%), Gaps = 15/133 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCG-QVVDCRICGDPNSV-LRFAFVEFTDEEGAR 232
E+ + T+YV +ID V+E+ L LF + G Q+ +I D N +AF+E+ D A
Sbjct: 153 ELSKTTLYVGNIDNSVSEDMLRDLFGSLGAQIQSIKILYDKNKRGFNYAFIEYEDHXKAE 212
Query: 233 AAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AL +L GT+L YP+++ T+ R++ R + T++ ++ ++
Sbjct: 213 NALQALNGTVLANYPLKI------------TWAYRTQQSRSGENFTLFVGDLSPEIDDDS 260
Query: 292 IKLFFESVCGEVQ 304
+ F VQ
Sbjct: 261 LAATFSKFPSFVQ 273
>gi|34015145|gb|AAQ56342.1| putative poly(A)-binding protein [Oryza sativa Japonica Group]
gi|125561054|gb|EAZ06502.1| hypothetical protein OsI_28747 [Oryza sativa Indica Group]
gi|125602953|gb|EAZ42278.1| hypothetical protein OsJ_26851 [Oryza sativa Japonica Group]
Length = 456
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAM 325
SV G + ++ + ++ FV+F +
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQFEL 176
>gi|195489681|ref|XP_002092839.1| GE11444 [Drosophila yakuba]
gi|194178940|gb|EDW92551.1| GE11444 [Drosophila yakuba]
Length = 307
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +L+ D + S R FV +
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAY 250
>gi|403415768|emb|CCM02468.1| predicted protein [Fibroporia radiculosa]
Length = 1020
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/83 (39%), Positives = 45/83 (54%), Gaps = 5/83 (6%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
N Y R RT + D R +YV+ + + VT++ L TLF T G V + R+ DP
Sbjct: 764 NVYISNPERKKERTDSDAND----REIYVAGLSRFVTKKDLETLFRTYGTVKEVRMALDP 819
Query: 215 NSVLR-FAFVEFTDEEGARAALS 236
N + FAF+EF E+ A AALS
Sbjct: 820 NGRPKGFAFIEFEQEQDASAALS 842
Score = 44.3 bits (103), Expect = 0.087, Method: Composition-based stats.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 10/148 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ ++ + + LF G + D R S RF +++FT A AAL
Sbjct: 692 RSTLYVTNFPEKADDAFVRNLFTKYGTIFDVRWPSKKFKSTRRFCYIQFTSPTSAEAALE 751
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L LP I+ NP + + + R IY + + VT+ D++ F
Sbjct: 752 LHKQELE----DGLPLNVYIS--NPE-RKKERTDSDANDREIYVAGLSRFVTKKDLETLF 804
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ G V+ +R+ D + AF+EF
Sbjct: 805 RTY-GTVKEVRMALDPNGRPKGFAFIEF 831
Score = 38.1 bits (87), Expect = 5.3, Method: Composition-based stats.
Identities = 29/113 (25%), Positives = 50/113 (44%), Gaps = 4/113 (3%)
Query: 125 PNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKR-RMNCRTSNAQQDEVIRRTVYV 183
PN M D T+ G + K+ R+ + + ++D TV+V
Sbjct: 565 PNAADSAGALPMDVDATSPAAGTKRKAEDEVALDENKKPRIEPKVAPLKRDRE-NCTVFV 623
Query: 184 SDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+D+ E+ L LF CG + + ++ PNS++ A VEF + + AAL+
Sbjct: 624 ADLPPAAGEDDLTLLFKDCGSIREIKMTQLPNSLV--ATVEFMERDSVPAALT 674
>gi|400598297|gb|EJP66014.1| CC1-like family splicing factor [Beauveria bassiana ARSEF 2860]
Length = 556
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 73/171 (42%), Gaps = 28/171 (16%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF-----LTCGQVVDCRICGDPNSVLRFAF 222
T +DE RRTV+V + ++ +L F +T Q+V RI G V +
Sbjct: 159 TPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVTEAQIVKDRISGRSKGV---GY 215
Query: 223 VEFTDEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREM 273
VEF DE+ AL L G L PV V ++ T +P +P
Sbjct: 216 VEFKDEDSVATALQLTGQKLLGIPVIVQVTEAEKNRQARNTEAGGPHPNHVP-------- 267
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 268 -FHRLYVGNIHFNVTEEDLRAVFEPF-GELEFVQLQKDESDRSRGYGFVQF 316
>gi|395324233|gb|EJF56678.1| RNA-binding protein Prp24 [Dichomitus squalens LYAD-421 SS1]
Length = 1028
Score = 52.0 bits (123), Expect = 4e-04, Method: Composition-based stats.
Identities = 44/148 (29%), Positives = 70/148 (47%), Gaps = 10/148 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
+ T+YV++ ++ ++ + TLF G++ D R S RF +V+FT A AL
Sbjct: 690 KSTLYVTNFPEKADDKFIRTLFGKYGEIFDVRWPSKKFKSTRRFCYVQFTSPTAAEHALE 749
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L GT L K ++ NP D + R +Y + K VT+ D++ F
Sbjct: 750 LNGTELE------ESHKMSVFISNPERRKERTDS-DADDREVYVAGLSKLVTKEDLENLF 802
Query: 297 ESVCGEVQRLRL-LGDYQHSTRIAFVEF 323
++ G V+ +R+ L D S AFVEF
Sbjct: 803 KTY-GTVKDVRMILDDKGRSKGFAFVEF 829
Score = 47.4 bits (111), Expect = 0.010, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCR-ICGDPNSVLRFAFVEFTDEEGARAALS 236
R VYV+ + + VT+E L LF T G V D R I D FAFVEF E ARAAL+
Sbjct: 782 REVYVAGLSKLVTKEDLENLFKTYGTVKDVRMILDDKGRSKGFAFVEFETENDARAALA 840
Score = 46.6 bits (109), Expect = 0.015, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 2/57 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
TV+V+++ VTE++L TLF CG + + +I PNS++ A VEF D E AAL+
Sbjct: 618 TVFVAEMPAGVTEDELRTLFKDCGSIREIKITQLPNSLV--ATVEFMDRESVPAALT 672
>gi|403162308|ref|XP_003890369.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172551|gb|EHS64663.1| hypothetical protein PGTG_21014 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1087
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 72/149 (48%), Gaps = 12/149 (8%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ + +E + + F G + D R S RF +++FT A AAL
Sbjct: 732 RSTLYVTNFPEDANDEWIRSKFSQFGSIFDVRWPSKRFKSTRRFCYIQFTSPASAEAALQ 791
Query: 237 LAGTMLGFYPVRVLPS-KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + + V P K ++ +PT ++ + + +Y T + K V + D++
Sbjct: 792 L-------HNLEVSPKQKMSVLISDPT-RKQTRSDNHANEKELYITCLSKYVQEDDLRKL 843
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F S GE++ +R++ D HS AFVEF
Sbjct: 844 F-SQFGEIKGVRVVLDQAGHSKGFAFVEF 871
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 73/156 (46%), Gaps = 17/156 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+ +Y++ + + V E+ L LF G++ R+ D + FAFVEF +E A+AALS+
Sbjct: 824 KELYITCLSKYVQEDDLRKLFSQFGEIKGVRVVLDQAGHSKGFAFVEFQNEMSAKAALSM 883
Query: 238 AGTMLGFYPVRVLPSKT---AIAPVNPTF-----LPRSEDEREMCSRTIYCTNIDKKVTQ 289
L + V S ++A N TF L + D R SR++ +NI + +
Sbjct: 884 NNVELKKRRIGVTISSAKGLSLARKNTTFKDETKLSSATDHR---SRSVRVSNIAEGTQE 940
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAM 325
I+ FE G+V + + A VEFA+
Sbjct: 941 ALIQQAFEQF-GKVLKTITYPEKNE----ALVEFAL 971
>gi|224059164|ref|XP_002299747.1| predicted protein [Populus trichocarpa]
gi|222847005|gb|EEE84552.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 76/168 (45%), Gaps = 25/168 (14%)
Query: 167 RTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 222
R Q+D R+T ++V ++D ++ L ++F G ++ C++ G+ F F
Sbjct: 89 RIMWCQRDPFARKTGFANLFVKNLDFSISSSCLESIFSKYGTILSCKVAGENGRSKGFGF 148
Query: 223 VEFTDEEGARAA-LSLAGTMLGFYPVRVLP-----SKTAIAPVNPTFLPRSEDEREMCSR 276
V+F ++ A A +L TMLG + V +TA AP
Sbjct: 149 VQFESQDSALVAQTALHDTMLGGKKLHVCKFVKKTERTAAAPCE-------------VFT 195
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
+Y N+D+ +T+ +K F SV G+V + ++ D++ S FV F
Sbjct: 196 NLYVKNLDETITEDGLKDMF-SVVGDVSSVAIMMDHEGKSKHFGFVNF 242
>gi|19922904|ref|NP_611924.1| CG4612, isoform A [Drosophila melanogaster]
gi|386768569|ref|NP_001246493.1| CG4612, isoform C [Drosophila melanogaster]
gi|195353161|ref|XP_002043074.1| GM11822 [Drosophila sechellia]
gi|195586434|ref|XP_002082979.1| GD24944 [Drosophila simulans]
gi|7291799|gb|AAF47219.1| CG4612, isoform A [Drosophila melanogaster]
gi|16648374|gb|AAL25452.1| LD36772p [Drosophila melanogaster]
gi|194127162|gb|EDW49205.1| GM11822 [Drosophila sechellia]
gi|194194988|gb|EDX08564.1| GD24944 [Drosophila simulans]
gi|220946122|gb|ACL85604.1| CG4612-PA [synthetic construct]
gi|220955844|gb|ACL90465.1| CG4612-PA [synthetic construct]
gi|383302680|gb|AFH08246.1| CG4612, isoform C [Drosophila melanogaster]
Length = 307
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 115 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 174
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 175 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 223
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +L+ D + S R FV +
Sbjct: 224 EPY-GRITSHKLMLDEEGRSRRFGFVAY 250
>gi|256082940|ref|XP_002577709.1| splicing factor [Schistosoma mansoni]
gi|360043602|emb|CCD81148.1| putative splicing factor [Schistosoma mansoni]
Length = 463
Score = 52.0 bits (123), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/137 (28%), Positives = 69/137 (50%), Gaps = 7/137 (5%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E A+ AL
Sbjct: 104 RTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVESAQLAL 162
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPT-FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L GT L P+++ S V+ T LPR + + +Y ++ +T+ +K
Sbjct: 163 GLTGTRLLGVPIQIQQSHAEKNRVSATPSLPRPSQQNRGPMK-LYIGSLHYNITEEMLKG 221
Query: 295 FFESVCGEVQRLRLLGD 311
FE G+++ ++L+ D
Sbjct: 222 IFEPF-GKIEDIKLIKD 237
>gi|449438385|ref|XP_004136969.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
gi|449495630|ref|XP_004159899.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 649
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 225
+N ++ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V +
Sbjct: 18 AANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNY 77
Query: 226 TDEEGARAALSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
++ A AL + T L P+RV+ S R R+ S I+ N+D
Sbjct: 78 SNPVDASRALDVLNFTPLNGNPIRVMYSH------------RDPSVRKSGSGNIFIKNLD 125
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
K + + F S G + ++ D S FV+F
Sbjct: 126 KAIDHKALHDTF-SAFGSILSCKVATDSSGQSKGFGFVQF 164
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+YV ++D + +++L LF G + C++ DPN + R + FV F+ EE ARA +
Sbjct: 313 LYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMN 372
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 373 GRMIVSKPLYV 383
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ +++ ++D+ + + L F G ++ C++ D + + F
Sbjct: 100 IRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGF 159
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV+F EE A A+ L G +L V V P FL R ++ + +T
Sbjct: 160 GFVQFDTEEAALKAIEKLNGMLLNDKQVFVGP-----------FL-RKQERESVSEKTKF 207
Query: 278 --IYCTNIDKKVTQGDIKLFF 296
++ N+ + ++ D+K F
Sbjct: 208 NNVFVKNLAETTSEEDLKNMF 228
>gi|367030019|ref|XP_003664293.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
gi|347011563|gb|AEO59048.1| hypothetical protein MYCTH_2306966 [Myceliophthora thermophila ATCC
42464]
Length = 787
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDTAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 243
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
+Y NI+ +VT+ + + F S GEV L D + +R FV F+
Sbjct: 244 YTNVYVKNINLEVTEEEFRELF-SKYGEVTSSTLARDQEGKSRGFGFVNFS 293
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 124
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 125 LNYTLIKGRPCRIMWSQ 141
>gi|296425387|ref|XP_002842223.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295638484|emb|CAZ86414.1| unnamed protein product [Tuber melanosporum]
Length = 1133
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 71/158 (44%), Gaps = 17/158 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
T+YV++ E + LF CG++VD R NS RF +V+F + A+ A SL
Sbjct: 747 TLYVTNFPPTADETCIRDLFKDCGEIVDIRFPSLKYNSHRRFCYVQFASSDEAQKATSLH 806
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQGDIKLF 295
G LG +T +A ++ P + ER R +Y NID + D++
Sbjct: 807 GKQLG-------GKETLVAKISA---PDQKHERSGAVYEGREVYIRNIDFQAHDNDVQEL 856
Query: 296 FESVCGEVQRLRLLGDYQHSTR--IAFVEFAMVSEPFS 331
F+ G ++++RL + T FV F+ E +
Sbjct: 857 FQKY-GRIEKVRLPPGPKKGTHKGYGFVTFSAKEEALA 893
>gi|7528270|gb|AAF63202.1|AF240679_1 poly(A)-binding protein [Cucumis sativus]
Length = 649
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 17/160 (10%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF 225
+N ++ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V +
Sbjct: 18 AANGGANQHVTTSLYVGDLDVNVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNY 77
Query: 226 TDEEGARAALSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
++ A AL + T L P+RV+ S R R+ S I+ N+D
Sbjct: 78 SNPVDASRALDVLNFTPLNGNPIRVMYSH------------RDPSVRKSGSGNIFIKNLD 125
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
K + + F S G + ++ D S FV+F
Sbjct: 126 KAIDHKALHDTF-SAFGSILSCKVATDSSGQSKGFGFVQF 164
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+YV ++D + +++L LF G + C++ DPN + R + FV F+ EE ARA +
Sbjct: 313 LYVKNLDDSIDDDKLKELFTGFGTITSCKVMRDPNGISRGSGFVAFSSPEEAARALAEMN 372
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 373 GRMIVSKPLYV 383
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 64/141 (45%), Gaps = 22/141 (15%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ +++ ++D+ + + L F G ++ C++ D + + F
Sbjct: 100 IRVMYSHRDPSVRKSGSGNIFIKNLDKAIDHKALHDTFSAFGSILSCKVATDSSGQSKGF 159
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV+F EE A A+ L G +L V V P FL R ++ + +T
Sbjct: 160 GFVQFDTEEAALKAIEKLNGMLLNDKQVFVGP-----------FL-RKQERESVSEKTKF 207
Query: 278 --IYCTNIDKKVTQGDIKLFF 296
++ N+ + ++ D+K F
Sbjct: 208 NNVFVKNLAETTSEEDLKNMF 228
>gi|395333502|gb|EJF65879.1| polyadenylate binding protein [Dichomitus squalens LYAD-421 SS1]
Length = 664
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/174 (25%), Positives = 73/174 (41%), Gaps = 28/174 (16%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 115 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGY 174
Query: 221 AFVEFTDEEGARAALSLAGTML--------GFYPVRVLPSKTAIAPVNPTFLPRSEDERE 272
FV + E A A+ ML G + R S+ R E
Sbjct: 175 GFVHYETAEAAETAIKAVNGMLLNDKKVYVGHHISRKASSRE-----------RQSKLEE 223
Query: 273 MCSR--TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
M ++ IY N+D +VTQ D FE G V + D Q +R FV F
Sbjct: 224 MKAQFTNIYVKNLDPEVTQDDFVKLFEQF-GNVTSAVIQTDEQGQSRGFGFVNF 276
>gi|385302465|gb|EIF46595.1| polyadenylate-binding protein 2 [Dekkera bruxellensis AWRI1499]
Length = 234
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 2/86 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
Q E+ RR+VYV +ID T L + CG++ I + FA+VEF D EG
Sbjct: 76 QREIDRRSVYVGNIDYSATTADLKKVLDDCGEINRITILYNHYTGRSKGFAYVEFNDVEG 135
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAI 256
A+AA+ L GT L + + +T I
Sbjct: 136 AKAAIELNGTELYSRALTIQQKRTNI 161
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 7/61 (11%)
Query: 270 EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQH----STRIAFVEFAM 325
+RE+ R++Y NID T D+K + CGE+ R+ +L Y H S A+VEF
Sbjct: 76 QREIDRRSVYVGNIDYSATTADLKKVLDD-CGEINRITIL--YNHYTGRSKGFAYVEFND 132
Query: 326 V 326
V
Sbjct: 133 V 133
>gi|224105583|ref|XP_002313862.1| predicted protein [Populus trichocarpa]
gi|222850270|gb|EEE87817.1| predicted protein [Populus trichocarpa]
Length = 642
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 70/150 (46%), Gaps = 15/150 (10%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 234
+ ++YV D++ VT+ QL LF GQVV R+C D S L + +V +++ + A A
Sbjct: 23 VTTSLYVGDLEANVTDSQLYDLFNQVGQVVSVRVCRDLTSRRSLGYGYVNYSNPQDAARA 82
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L + L F PV P + + +P+ R+ + I+ N+DK + +
Sbjct: 83 LEV----LNFTPVNGSPIRVMYSHRDPSV-------RKSGAGNIFIKNLDKAIDHKALHD 131
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F SV G + ++ D S FV+F
Sbjct: 132 TF-SVFGNILSCKVATDPSGQSKGYGFVQF 160
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +E++ LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 309 LYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 368
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 369 GKMVASKPLYV 379
>gi|313226301|emb|CBY21445.1| unnamed protein product [Oikopleura dioica]
Length = 471
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 13/159 (8%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFT 226
+ A+ DE+ +RT+YV ++ + TE L LF G VVD ++ D S + F+ +
Sbjct: 36 SEQAKDDEIFKRTLYVGNLHKNATENVLKALFAVIGNVVDIKMINDAALSTSHYCFITYE 95
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
GA+ AL+ + V +P K VN P + I+ ++ ++
Sbjct: 96 THVGAQRALA----AMNGRDVYKMPLK-----VNWATRPDGIKKDTSKDHHIFVGDLAQE 146
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
+T D++ FE G++ R++ D Q S FV F
Sbjct: 147 LTTLDLQNEFEKF-GKISEARVVRDAQTNRSKGYGFVAF 184
>gi|198430188|ref|XP_002121753.1| PREDICTED: similar to Nucleolysin TIAR (TIA-1-related protein)
[Ciona intestinalis]
Length = 476
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 67/154 (43%), Gaps = 15/154 (9%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 232
+DE +T+YV ++D V+E + LF G C++ DP + FVEF + A
Sbjct: 20 EDEAYPKTLYVGNLDPLVSESLIMELFCVIGPCKSCKMITDPAGGDPYCFVEFYEHSHAL 79
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGD 291
AA G R + K + + R ++R+ + I+ ++ + T D
Sbjct: 80 AA-------HGAMNQRKILGKE----IRVNWATRPSNKRDTSNHHHIFVGDLAPETTSDD 128
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
+K +F + G V R++ D Q S FV F
Sbjct: 129 LKTYFSRI-GIVSDARVMRDLQTNKSKGYGFVSF 161
>gi|302920668|ref|XP_003053121.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
gi|256734061|gb|EEU47408.1| hypothetical protein NECHADRAFT_59146 [Nectria haematococca mpVI
77-13-4]
Length = 742
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 131 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 190
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 191 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 239
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI + T+ D + FE G+V L D + +R FV F
Sbjct: 240 FTNVYVKNISPEATEDDFRQLFEQY-GDVTSSSLARDQEGKSRGFGFVNF 288
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 61 SLYVGELDPAVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTADGEKALEE 120
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 121 LNYTIIKGRPCRIMWSQ 137
>gi|399217186|emb|CCF73873.1| unnamed protein product [Babesia microti strain RI]
Length = 145
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 49/96 (51%), Gaps = 10/96 (10%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV------VDCRICGDPNSVLRF 220
RT++ QD+V RR+VYV +++ T + L F +CGQ+ VD + G P +
Sbjct: 29 RTNDTSQDDVDRRSVYVGNVEYSATPQNLQEYFKSCGQINRITIMVD-KWTGHPKG---Y 84
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
A++EF EE AL L T+ ++V + I
Sbjct: 85 AYIEFAQEESVENALLLNETLFKERLIKVTSKRKNI 120
>gi|358399615|gb|EHK48952.1| hypothetical protein TRIATDRAFT_164478, partial [Trichoderma
atroviride IMI 206040]
Length = 571
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 20/162 (12%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF
Sbjct: 178 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISGRSKGV---GYVEFKS 234
Query: 228 EEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
E+ + AL L G L PV V ++ A P + + P S + +Y N
Sbjct: 235 EDAVQQALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSTSGHPNS-----IPFHRLYVGN 289
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 290 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQF 330
>gi|125775095|ref|XP_001358799.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|195144954|ref|XP_002013461.1| GL24152 [Drosophila persimilis]
gi|54638540|gb|EAL27942.1| GA18869 [Drosophila pseudoobscura pseudoobscura]
gi|194102404|gb|EDW24447.1| GL24152 [Drosophila persimilis]
Length = 464
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 76/158 (48%), Gaps = 14/158 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+EE L LF T G V +C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEELLIALFGTMGAVKNCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ L F + VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNKRL-FLEKEIK--------VNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
+ F GE+ R++ D Q S AFV F +E
Sbjct: 112 REAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKAE 148
>gi|340517112|gb|EGR47358.1| polyadenylate-binding protein [Trichoderma reesei QM6a]
Length = 745
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI VT D + FE G+V L D + TR FV F
Sbjct: 239 FTNVYVKNIAPDVTDEDFRQLFEKF-GDVTSSSLARDQEGKTRGFGFVNF 287
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 120 LNYTLIKGRPCRIMWSQ 136
>gi|115475838|ref|NP_001061515.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|35215045|dbj|BAC92404.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|35215184|dbj|BAC92537.1| putative polyadenylate-binding protein [Oryza sativa Japonica
Group]
gi|113623484|dbj|BAF23429.1| Os08g0314800 [Oryza sativa Japonica Group]
gi|215694402|dbj|BAG89395.1| unnamed protein product [Oryza sativa Japonica Group]
gi|258644698|dbj|BAI39945.1| putative poly(A)-binding protein [Oryza sativa Indica Group]
Length = 660
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 71/151 (47%), Gaps = 19/151 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 40 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRLSLGYAYVNFSSPADAARALE- 98
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 99 ---MLNFTPINGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALYD 145
Query: 298 --SVCGEVQRLRLLGDYQHSTR-IAFVEFAM 325
SV G + ++ + ++ FV+F +
Sbjct: 146 TFSVFGNILSCKVATEMSGESKGYGFVQFEL 176
>gi|307178104|gb|EFN66931.1| Nucleolysin TIAR [Camponotus floridanus]
Length = 393
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDASVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQ--SA 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F SE
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSE 149
>gi|449282485|gb|EMC89318.1| Polyadenylate-binding protein 2, partial [Columba livia]
Length = 178
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 8/93 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEE 229
EV +R+VYV ++D T E+L + F +CGQV + C + G P +A++EF ++
Sbjct: 42 EVDQRSVYVGNVDYGSTAEELESHFHSCGQVNRVTILCDKFSGHPKG---YAYIEFEEKS 98
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
+AA+ L ++ ++VLP +T + ++ T
Sbjct: 99 SVKAAVELDESVFRGRVIKVLPKRTNMPGISST 131
>gi|425770690|gb|EKV09156.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum Pd1]
gi|425772037|gb|EKV10463.1| RNA splicing factor (Pad-1), putative [Penicillium digitatum PHI26]
Length = 556
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 8/157 (5%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
+DE RRT++V + ++ + L T F G V D +I D S +VEF +EE
Sbjct: 160 EDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEES 219
Query: 231 ARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
AA+ L G ML P+ ++ ++ NP + ++ +Y N+ +T
Sbjct: 220 VAAAIRLTGQMLLGIPIIAQLTEAEKNRQARNPEAT--AGNQHTAPFHRLYVGNVHFSIT 277
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
+ D+ FE GE++ ++L D ++ AFV+FA
Sbjct: 278 EDDLTNVFEPF-GELEFVQLQKDETGRSKGYAFVQFA 313
>gi|389744897|gb|EIM86079.1| hypothetical protein STEHIDRAFT_98435 [Stereum hirsutum FP-91666
SS1]
Length = 1064
Score = 51.2 bits (121), Expect = 6e-04, Method: Composition-based stats.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 18/152 (11%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T+YV++ ++V +E++ +F G + D R + RF +V+FT + A+A+L
Sbjct: 723 RSTLYVTNFPERVDDEEVRKIFGKYGLIFDVRWPSKKFKATRRFCYVQFTSPDAAKASLE 782
Query: 237 LAGTMLG-FYPVRVLPSKTAIAPVNPTFLPRSEDER---EMCSRTIYCTNIDKKVTQGDI 292
L G L P+ V S P + ER + +R +Y + + K + D+
Sbjct: 783 LHGHELEPNLPLNVYISN-----------PERKKERTDADANAREVYVSGLSKFADKSDL 831
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ F++ G ++ +R+ D Q ++ AFVEF
Sbjct: 832 ERVFKTY-GPIKEIRMTVDEQGRSKGFAFVEF 862
Score = 43.5 bits (101), Expect = 0.14, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
TV+V+D+ T++ L LF CG + D +I PN+ A VEF++ E AAL+
Sbjct: 651 TVFVADLPSNTTDDDLKALFKDCGSIRDIKITSLPNT--HVATVEFSERESVPAALT 705
>gi|330802862|ref|XP_003289431.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
gi|325080473|gb|EGC34027.1| hypothetical protein DICPUDRAFT_11237 [Dictyostelium purpureum]
Length = 168
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 28/160 (17%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-GDPNSVLRFAFVEFTDEE 229
A +DE+ ++V + +V E+++ T F CG++ + ++ G+P V AFV F E+
Sbjct: 2 AAEDEL---KIFVGQLPSRVNEDEIRTYFEECGEITNVKVLSGNPQRVA--AFVTFATED 56
Query: 230 GARAALSLAGTML-GFYPVRV--LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
G AA++ G G P+R+ SK + PT TI NI
Sbjct: 57 GKNAAIAFNGKDFNGNGPLRINAANSKPSDGEGEPT--------------TIVARNIAFS 102
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI---AFVEF 323
V + +K FF+ CG++ R+ L Y+ S R+ AFV F
Sbjct: 103 VDETLVKEFFQG-CGKITRVS-LPTYEDSGRLKGFAFVSF 140
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 36/85 (42%), Gaps = 2/85 (2%)
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSV 217
G R+N S E T+ +I V E + F CG++ V D +
Sbjct: 73 GPLRINAANSKPSDGEGEPTTIVARNIAFSVDETLVKEFFQGCGKITRVSLPTYEDSGRL 132
Query: 218 LRFAFVEFTDEEGARAALSLAGTML 242
FAFV F EE A++LAGTM
Sbjct: 133 KGFAFVSFDSEEAVDKAIALAGTMF 157
>gi|189521749|ref|XP_001923043.1| PREDICTED: polyadenylate-binding protein 2-B-like isoform 1 [Danio
rerio]
Length = 192
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 8/84 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGAR 232
RR++YV ++D T ++L F +CG V R G P FA++EF+D E R
Sbjct: 65 RRSIYVGNVDYGATADELEMYFNSCGHVNRVTIPYNRFTGHPKG---FAYIEFSDRESVR 121
Query: 233 AALSLAGTMLGFYPVRVLPSKTAI 256
A++L T+ ++V P +T I
Sbjct: 122 TAMALDETLFRGRVIKVSPKRTNI 145
>gi|322704095|gb|EFY95694.1| RNA splicing factor Pad-1 [Metarhizium anisopliae ARSEF 23]
Length = 558
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 72/167 (43%), Gaps = 29/167 (17%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFT 226
+DE RTV+V + ++ ++L F + Q+V RI G V +VEF
Sbjct: 167 EDERDSRTVFVQQLAARLRSDKLKRFFEENAGPVNEAQIVKDRISGRSKGV---GYVEFK 223
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSRT 277
DEE + AL L G L P+ V ++ T NP +P
Sbjct: 224 DEETVQKALQLTGKPLAGIPIIVKLTEAEKNRQARNTESTSGNPNSVP---------FHR 274
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 275 LYVGNIHFNVTEQDLQAVFEPF-GELEYVQLQKDDNGRSRGYGFVQF 320
>gi|195429621|ref|XP_002062856.1| GK19472 [Drosophila willistoni]
gi|194158941|gb|EDW73842.1| GK19472 [Drosophila willistoni]
Length = 297
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/148 (24%), Positives = 70/148 (47%), Gaps = 17/148 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAG 239
+Y+ ++++ + + + F G +++C + D + R + FV F EE ARAA+
Sbjct: 105 IYIKNLERSIDNKAVYDTFSVFGNILNCNVAKDEDGNSRGYGFVHFDSEEAARAAIEKVN 164
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--RTIYCTNIDKKVTQGDIKLFF 296
ML V V+ F+PR + E+E + + +Y N+ ++ T+ ++ F
Sbjct: 165 GMLCNNQKVHVVK-----------FIPRRDREQEKATHFKNLYVKNLSEEFTEQHLREMF 213
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
E G + +L+ D + S + FV F
Sbjct: 214 EPY-GRITSHKLMLDEEGRSRKFGFVAF 240
>gi|18376336|emb|CAD21082.1| RNA splicing factor Pad-1 [Neurospora crassa]
Length = 571
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSITEQ 296
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
D++ FE GE++ ++L D +R FV+F
Sbjct: 297 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQF 329
>gi|398407631|ref|XP_003855281.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
gi|339475165|gb|EGP90257.1| hypothetical protein MYCGRDRAFT_36576 [Zymoseptoria tritici IPO323]
Length = 598
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 70/159 (44%), Gaps = 4/159 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
Q+E +RTV+V + + +QL F G VV+ +I D S +VEF DEE
Sbjct: 206 QEERDKRTVFVQQLAAALRTKQLKAFFEQSGPVVEAQIVKDRVSGRSKGVGYVEFADEES 265
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+ AL L G L P+ V ++ T + + +Y NI + +
Sbjct: 266 VQKALELTGQKLMNIPIIVQLTEAEKNRQARTSEGQPTQSNGIPFHRLYVGNIHFSIEES 325
Query: 291 DIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEFAMVSE 328
D++ FE GE++ ++L D S FV+FA E
Sbjct: 326 DLRDVFEPF-GELEFVQLQKEDTGRSKGYGFVQFAKSDE 363
>gi|226496737|ref|NP_001151785.1| LOC100285420 [Zea mays]
gi|195649671|gb|ACG44303.1| polyadenylate-binding protein 2 [Zea mays]
gi|414586484|tpg|DAA37055.1| TPA: polyadenylate-binding protein 2 [Zea mays]
Length = 660
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 38/122 (31%), Positives = 55/122 (45%), Gaps = 15/122 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 236
++YV D++ V++ QL LF GQVV R+C D S L +A+V F + + ARA
Sbjct: 41 SLYVGDLEGSVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNFNNPLDAARALEV 100
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P+RV+ S R R S I+ N+DK + + F
Sbjct: 101 LNFAPLNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKMIDNKSLHETF 148
Query: 297 ES 298
S
Sbjct: 149 SS 150
Score = 41.2 bits (95), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 46/96 (47%), Gaps = 14/96 (14%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + ++QL LF G++ C++ D N + + + FV F T EE ++A +
Sbjct: 324 LYLKNLDDSIGDDQLRELFSNFGKITSCKVMRDQNGLSKGSGFVAFSTREEASQALTEMN 383
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
G M+ P+ V F R ED + M
Sbjct: 384 GKMISGKPLYV------------AFAQRKEDRKAML 407
>gi|452820290|gb|EME27334.1| RNA-binding protein [Galdieria sulphuraria]
Length = 596
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RT++V + Q+VTE+ + F G+V D R+ D S A+VEF +E +A+
Sbjct: 186 RTIFVWQLAQKVTEKDVYNFFSAAGKVRDIRMIIDKRSGRHKGAAYVEFYYKEAIPSAMR 245
Query: 237 LAGTMLGFYPVRVLPSK 253
LAG L YPV + PS+
Sbjct: 246 LAGQQLCGYPVAIKPSE 262
>gi|356575464|ref|XP_003555861.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 600
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+R V+ I + E + F G+V D R+ D NS ++EF D A+
Sbjct: 225 QRAVFAYQISLKADERDVFEFFSRAGKVRDVRLIMDRNSRRSKGVGYIEFYDVMSVPMAI 284
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPT----------FLPRSEDEREMCSRTIYCTNIDK 285
+L+G L PV V PS+ V T P S +R +Y N+
Sbjct: 285 ALSGQPLLGQPVMVKPSEAEKNLVQSTTSVANGLTGLIGPYS-----GGARKLYVGNLHI 339
Query: 286 KVTQGDIKLFFESVCGEVQRLRL-LGDYQHSTRIAFVEFAMVSE 328
+T+ DI+ FE+ G+V+ ++L L + H FV+FA + +
Sbjct: 340 SITEADIRRVFEAF-GQVELVQLPLDESGHCKGFGFVQFARLED 382
>gi|336468898|gb|EGO57061.1| hypothetical protein NEUTE1DRAFT_66048 [Neurospora tetrasperma FGSC
2508]
gi|350288804|gb|EGZ70029.1| RNA splicing factor Pad-1 [Neurospora tetrasperma FGSC 2509]
Length = 571
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSITEQ 296
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
D++ FE GE++ ++L D +R FV+F
Sbjct: 297 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQF 329
>gi|320580160|gb|EFW94383.1| Splicing factor [Ogataea parapolymorpha DL-1]
Length = 295
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 70/157 (44%), Gaps = 22/157 (14%)
Query: 179 RTVYVSDID-QQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-----FAFVEFTDEEGAR 232
R VYVSD+D +V E++L+ +F G + RI + + FAF+ F A
Sbjct: 116 RQVYVSDLDFYKVDEDKLSEIFSKYGDIEMIRIPVRRDEKSKKLNNGFAFISFRSSSDAV 175
Query: 233 AALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+L L G +L P+++ P K ++ + R+ RTI N+D K+
Sbjct: 176 KSLELDGKLLAGRPMKIELATPKKKKVSVLGTGKFDRA--------RTISVLNVDDKINT 227
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMV 326
+K FE + G V ++ L Q A +EF V
Sbjct: 228 ETLKAIFEEI-GPVTQIEL----QPENNAALIEFETV 259
>gi|85076094|ref|XP_955878.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
gi|28916904|gb|EAA26642.1| hypothetical protein NCU03491 [Neurospora crassa OR74A]
Length = 576
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 236
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 237 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSITEQ 296
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
D++ FE GE++ ++L D +R FV+F
Sbjct: 297 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQF 329
>gi|358386930|gb|EHK24525.1| hypothetical protein TRIVIDRAFT_71881 [Trichoderma virens Gv29-8]
Length = 571
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 20/162 (12%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF +
Sbjct: 179 EDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGV---GYVEFKN 235
Query: 228 EEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
E+ + AL L G L PV V ++ A P P S + +Y N
Sbjct: 236 EDSVQLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDASNGHPNS-----IPFHRLYVGN 290
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 291 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQF 331
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 42/87 (48%), Gaps = 2/87 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N SN + + +YV +I VTE+ L +F G++ ++ D N R + FV
Sbjct: 270 NPDASNGHPNSIPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFV 329
Query: 224 EFTDEEGARAAL-SLAGTMLGFYPVRV 249
+F D AR AL + G L P+RV
Sbjct: 330 QFRDAGQAREALEKMNGFDLAGRPIRV 356
>gi|19112586|ref|NP_595794.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe 972h-]
gi|74675955|sp|O14327.1|PAB2_SCHPO RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName:
Full=Poly(A)-binding protein II; Short=PABII
gi|2467274|emb|CAB16904.1| poly(A) binding protein Pab2 [Schizosaccharomyces pombe]
Length = 166
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
++VYV ++D VT E+L + F +CG V + C + G P FA++EF++
Sbjct: 55 QSVYVGNVDYSVTPEELQSHFASCGSVNRVTILCDKFTGHPKG---FAYIEFSEPSLVPN 111
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
AL L G+ML P++V P +T +
Sbjct: 112 ALLLNGSMLHERPLKVTPKRTNV 134
>gi|4530579|gb|AAD22102.1| Pad-1 [Neurospora crassa]
Length = 575
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 4/154 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF +E+
Sbjct: 176 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 235
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 236 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTETSGHHPNSIPFHRLYVGNIHFSITEQ 295
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
D++ FE GE++ ++L D +R FV+F
Sbjct: 296 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQF 328
>gi|357145576|ref|XP_003573691.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 663
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 16/121 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A A+
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARAME- 101
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F PV P + + +P+ R+ + I+ N+DK + D K F+
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI---DNKALFD 148
Query: 298 S 298
+
Sbjct: 149 T 149
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 181 VYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 237
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ +RA +++
Sbjct: 326 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDASRALVAM 385
Query: 238 AGTMLGFYPVRV 249
G M+G P+ V
Sbjct: 386 NGKMVGSKPLYV 397
>gi|357473893|ref|XP_003607231.1| 28 kDa ribonucleoprotein [Medicago truncatula]
gi|355508286|gb|AES89428.1| 28 kDa ribonucleoprotein [Medicago truncatula]
Length = 643
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 384 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 443
Query: 238 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 294
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 444 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 502
Query: 295 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
F CGE R+ + D++ +S A+++F
Sbjct: 503 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDF 536
>gi|194374387|dbj|BAG57089.1| unnamed protein product [Homo sapiens]
Length = 168
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 44 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 100
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 101 SLALDESLFRGRQIKVIPKRT 121
>gi|126717485|gb|AAI33469.1| PABPN1 protein [Bos taurus]
Length = 296
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
>gi|215820610|ref|NP_001135964.1| RNA binding motif protein 39 [Nasonia vitripennis]
Length = 516
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 10/168 (5%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R+ +E RT++ + Q++ L F + G+V D
Sbjct: 127 TLSRSRQPFIKGASPLTNRSDELTPEERDARTIFCMQLSQRIRARDLEEFFSSVGKVQDV 186
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 187 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 246
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+P+ + +Y ++ +T+ +K FE G+++ ++L+ D
Sbjct: 247 MPKG----QTGPMRLYVGSLLFNITEEMLKGIFEPF-GKIENIQLIMD 289
>gi|27807029|ref|NP_776994.1| polyadenylate-binding protein 2 [Bos taurus]
gi|46396285|sp|Q28165.3|PABP2_BOVIN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|1051125|emb|CAA62006.1| polyA binding protein II [Bos taurus]
gi|126920947|gb|AAI33559.1| Poly(A) binding protein, nuclear 1 [Bos taurus]
gi|296483592|tpg|DAA25707.1| TPA: polyadenylate-binding protein 2 [Bos taurus]
Length = 306
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
>gi|149063930|gb|EDM14200.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Rattus
norvegicus]
Length = 184
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 60 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 116
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 117 SLALDESLFRGRQIKVIPKRT 137
>gi|417409281|gb|JAA51155.1| Putative splicing factor rnps1 sr protein superfamily, partial
[Desmodus rotundus]
Length = 278
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 154 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 210
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 211 SLALDESLFRGRQIKVIPKRT 231
>gi|443895761|dbj|GAC73106.1| polyadenylate-binding protein [Pseudozyma antarctica T-34]
Length = 556
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 61/143 (42%), Gaps = 17/143 (11%)
Query: 162 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
R CR +Q+D +RRT +++ ++D + + L F G ++ C++ +
Sbjct: 113 RNRPCRIMWSQRDPALRRTGQGNIFIKNLDAGIDNKALHDTFAAFGNILSCKVATSESGS 172
Query: 218 LRFAFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
L + FV + E A AA+ ML Y +P K A + E+ R
Sbjct: 173 LGYGFVHYETAEAADAAIKHVNGMLLNDKKVYVGHHIPRKERQAKI--------EESRAR 224
Query: 274 CSRTIYCTNIDKKVTQGDIKLFF 296
+ +YC N+D VT + + F
Sbjct: 225 FT-NVYCKNVDADVTDEEFEKLF 246
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L +F G V R+C D L +A+V F + +G RA
Sbjct: 47 SLYVGELDPSVTEAMLFEIFNMIGPVASIRVCRDAVTRRSLGYAYVNFLNAADGERAMEQ 106
Query: 237 LAGTMLGFYPVRVLPSK 253
L +++ P R++ S+
Sbjct: 107 LNYSLIRNRPCRIMWSQ 123
>gi|149063931|gb|EDM14201.1| poly(A) binding protein, nuclear 1, isoform CRA_c [Rattus
norvegicus]
Length = 194
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 60 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 116
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 117 SLALDESLFRGRQIKVIPKRT 137
>gi|326526505|dbj|BAJ97269.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 43 SLYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE- 101
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
ML F PV P + + +P+ R+ + I+ N+DK +
Sbjct: 102 ---MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI 141
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 181 VYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 237
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ RA +++
Sbjct: 326 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 385
Query: 238 AGTMLGFYPVRV 249
G M+G P+ V
Sbjct: 386 NGKMVGSKPLYV 397
>gi|301792821|ref|XP_002931377.1| PREDICTED: polyadenylate-binding protein 2-like [Ailuropoda
melanoleuca]
Length = 178
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 37 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 93
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 94 DKESVRTSLALDESLFRGRQIKVIPKRT 121
>gi|440893202|gb|ELR46056.1| Polyadenylate-binding protein 2, partial [Bos grunniens mutus]
Length = 189
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 55 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 111
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 112 SLALDESLFRGRQIKVIPKRT 132
>gi|392591591|gb|EIW80918.1| hypothetical protein CONPUDRAFT_103939 [Coniophora puteana
RWD-64-598 SS2]
Length = 1056
Score = 50.8 bits (120), Expect = 9e-04, Method: Composition-based stats.
Identities = 40/142 (28%), Positives = 66/142 (46%), Gaps = 17/142 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+ VYV+ + + T+E L +F T G V D R+ D N + FAFVEF E A+AALS
Sbjct: 807 KEVYVAGLSKYTTKEDLKGVFKTYGTVNDVRLVTDKNGQSKGFAFVEFESETSAQAALSA 866
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER--------EMCSRTIYCTNIDKKVTQ 289
Y +R + A+ + PR +D + E+ R++ N+ +
Sbjct: 867 NN-----YELR--SRRIAVTLADSRVKPRYQDSKDTGLGRQAELQQRSVRIRNLPAGAQE 919
Query: 290 GDIKLFFESVCGEVQRLRLLGD 311
G ++ E C ++R+ + D
Sbjct: 920 GLLQQALEKYC-VIKRVEVFED 940
>gi|313214618|emb|CBY40937.1| unnamed protein product [Oikopleura dioica]
gi|313226203|emb|CBY21346.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++Y+ +D T E+L F CG + + C + G P FA++EFT++E A
Sbjct: 88 RSIYIGQVDYSSTAEELEQHFHGCGALNRVTIICDKYSGQPKG---FAYIEFTEKESVDA 144
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A++L G+M ++V+P +T V+ T
Sbjct: 145 AIALDGSMFRDRQIKVMPKRTNKPGVSST 173
>gi|388496342|gb|AFK36237.1| unknown [Medicago truncatula]
Length = 202
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 84/192 (43%), Gaps = 28/192 (14%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
R +R+ ++ RR + N + + E +RTV+ + + TE + F G+V D
Sbjct: 8 RGERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 67
Query: 208 CRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------T 254
R+ D NS ++EF D A++L+G +L PV V PS+ +
Sbjct: 68 VRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASS 127
Query: 255 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ- 313
A V P R +Y N+ +T+ +++ FE G+++ ++L D +
Sbjct: 128 GAAVVGPY---------GAVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMET 177
Query: 314 -HSTRIAFVEFA 324
H FV+FA
Sbjct: 178 GHCKGFGFVQFA 189
>gi|356499763|ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 646
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGA 231
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V F++ ++ A
Sbjct: 24 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 83
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
RA L T L P+R++ S R R+ I+ N+D+ +
Sbjct: 84 RALDVLNFTPLNNRPIRIMYSH------------RDPSIRKSGQGNIFIKNLDRAIDHKA 131
Query: 292 IKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
+ F S G + ++ D S FV+F
Sbjct: 132 LHDTF-STFGNILSCKVATDSSGQSKGYGFVQF 163
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +++L LF G + C++ DPN + R + FV F T +E +RA L +
Sbjct: 312 LYVKNLDDSLGDDKLKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALLEMN 371
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
G M+ P+ V T R ED R
Sbjct: 372 GKMVVSKPLYV------------TLAQRKEDRR 392
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F T G ++ C++ D + + +
Sbjct: 99 IRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGY 158
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER---EMCSR 276
FV+F +EE A+ A+ L G +L V V P FL + E E +
Sbjct: 159 GFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP-----------FLRKQERESTADKAKFN 207
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
++ N+ + T ++K F
Sbjct: 208 NVFVKNLSESTTDDELKNVF 227
>gi|414876768|tpg|DAA53899.1| TPA: hypothetical protein ZEAMMB73_403376 [Zea mays]
gi|414876769|tpg|DAA53900.1| TPA: hypothetical protein ZEAMMB73_403376 [Zea mays]
Length = 924
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTD 227
T+ A + + ++RTV +S++ +T + + LF CG+VVDC + + +VE++
Sbjct: 330 TNKADEADALKRTVQISNLSPLLTVDYIKQLFGFCGKVVDCVMT----DTKQIVYVEYSK 385
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
E A AAL L +G P+ V +K A+ P LP
Sbjct: 386 PEEATAALELNSKSVGGRPLNVEMAK-ALPPKANNNLP 422
>gi|351697106|gb|EHB00025.1| Polyadenylate-binding protein 2, partial [Heterocephalus glaber]
Length = 189
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 55 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 111
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 112 SLALDESLFRGRQIKVIPKRT 132
>gi|297694743|ref|XP_002824624.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pongo abelii]
Length = 296
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
>gi|432851905|ref|XP_004067100.1| PREDICTED: embryonic polyadenylate-binding protein 2-like [Oryzias
latipes]
Length = 259
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R+VYV ++D T ++L F CG V + C R G P FA++EF+D A++
Sbjct: 79 RSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFSDRSAAQS 135
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A+ L TM ++VLP +T + ++ T
Sbjct: 136 AVGLHETMFRGRVLKVLPKRTNMPGISTT 164
>gi|126010727|gb|AAI33552.1| PABPN1 protein [Bos taurus]
Length = 275
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 141 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 197
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 198 SLALDESLFRGRQIKVIPKRT 218
>gi|356521524|ref|XP_003529405.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 651
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGA 231
+ + ++YV D+D VT+ QL LF GQVV R+C D S L + +V F++ ++ A
Sbjct: 27 QFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNPQDAA 86
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
RA L T L P+R++ S R R+ I+ N+D+ +
Sbjct: 87 RALDVLNFTPLNNRPIRIMYSH------------RDPSIRKSGQGNIFIKNLDRAIDHKA 134
Query: 292 IKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
+ F S G + ++ D S FV+F
Sbjct: 135 LHDTF-STFGNILSCKVATDSSGQSKGYGFVQF 166
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 14/93 (15%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +E+L LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 315 LYVKNLDDSIGDEKLKELFSPFGTITSCKVMRDPNGLSRGSGFVAFSTPEEASRALLEMN 374
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
G M+ P+ V T R ED R
Sbjct: 375 GKMVVSKPLYV------------TLAQRKEDRR 395
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F T G ++ C++ D + + +
Sbjct: 102 IRIMYSHRDPSIRKSGQGNIFIKNLDRAIDHKALHDTFSTFGNILSCKVATDSSGQSKGY 161
Query: 221 AFVEFTDEEGARAALSLAGTML 242
FV+F +EE A+ A+ ML
Sbjct: 162 GFVQFDNEESAQKAIEKLNGML 183
>gi|332029721|gb|EGI69600.1| Nucleolysin TIAR [Acromyrmex echinatior]
Length = 393
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTSVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQC--A 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 60 ATALAAMNKRSFLDKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 113
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F SE
Sbjct: 114 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSE 149
>gi|281353092|gb|EFB28676.1| hypothetical protein PANDA_022375 [Ailuropoda melanoleuca]
Length = 152
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 23 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 79
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 80 DKESVRTSLALDESLFRGRQIKVIPKRT 107
>gi|156064869|ref|XP_001598356.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980]
gi|154691304|gb|EDN91042.1| hypothetical protein SS1G_00444 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 570
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 171 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 227
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE AA+ L G L P+ ++ ++ NP + + ++ +Y NI
Sbjct: 228 EESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHF 285
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+T+ D++ FE GE++ ++L + Q +R FV+F
Sbjct: 286 SITEADLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQF 323
>gi|4758876|ref|NP_004634.1| polyadenylate-binding protein 2 [Homo sapiens]
gi|343780920|ref|NP_001230477.1| polyadenylate-binding protein 2 [Sus scrofa]
gi|360039231|ref|NP_001123909.2| polyadenylate-binding protein 2 [Canis lupus familiaris]
gi|114652132|ref|XP_001162168.1| PREDICTED: polyadenylate-binding protein 2 isoform 1 [Pan
troglodytes]
gi|296214561|ref|XP_002753680.1| PREDICTED: polyadenylate-binding protein 2 isoform 2 [Callithrix
jacchus]
gi|395859297|ref|XP_003801976.1| PREDICTED: polyadenylate-binding protein 2 [Otolemur garnettii]
gi|402875708|ref|XP_003901638.1| PREDICTED: polyadenylate-binding protein 2 [Papio anubis]
gi|426376431|ref|XP_004055004.1| PREDICTED: polyadenylate-binding protein 2 [Gorilla gorilla
gorilla]
gi|46403176|sp|Q86U42.3|PABP2_HUMAN RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2895276|gb|AAC39596.1| poly(A) binding protein II [Homo sapiens]
gi|15012075|gb|AAH10939.1| Poly(A) binding protein, nuclear 1 [Homo sapiens]
gi|119586571|gb|EAW66167.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|119586572|gb|EAW66168.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Homo sapiens]
gi|387539310|gb|AFJ70282.1| polyadenylate-binding protein 2 [Macaca mulatta]
Length = 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
>gi|28193136|emb|CAD62310.1| unnamed protein product [Homo sapiens]
Length = 298
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 174 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 230
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 231 SLALDESLFRGRQIKVIPKRT 251
>gi|9506945|ref|NP_062275.1| polyadenylate-binding protein 2 [Mus musculus]
gi|46396417|sp|Q8CCS6.3|PABP2_MOUSE RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|2351846|gb|AAC00210.1| poly(A) binding protein II [Mus musculus]
gi|33585929|gb|AAH55866.1| Poly(A) binding protein, nuclear 1 [Mus musculus]
gi|148704376|gb|EDL36323.1| poly(A) binding protein, nuclear 1, isoform CRA_b [Mus musculus]
Length = 302
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 161 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 217
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|226505274|ref|NP_001145712.1| uncharacterized protein LOC100279216 [Zea mays]
gi|219884125|gb|ACL52437.1| unknown [Zea mays]
Length = 787
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
A + + ++RTV +S++ +T + + LF CG+VVDC I + A+VE++ E
Sbjct: 332 KADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTITDSKH----IAYVEYSKPE 387
Query: 230 GARAALSLAGTMLGFYPVRV-----LPSK 253
A AAL +G P+ V LPSK
Sbjct: 388 EATAALEFNNKNVGGRPLNVEMAKSLPSK 416
>gi|403333973|gb|EJY66125.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1017
Score = 50.8 bits (120), Expect = 0.001, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 237
TVYV + Q E++L F G + R+ +PN L+ F +++F ++ + A+ SL
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKS------------KKEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
GEV+R+ L D + HS F+EF
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEF 870
>gi|380800735|gb|AFE72243.1| polyadenylate-binding protein 2, partial [Macaca mulatta]
Length = 273
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 139 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 195
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 196 SLALDESLFRGRQIKVIPKRT 216
>gi|348577533|ref|XP_003474538.1| PREDICTED: polyadenylate-binding protein 2-like [Cavia porcellus]
Length = 306
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 229 SLALDESLFRGRQIKVIPKRT 249
>gi|312371659|gb|EFR19788.1| hypothetical protein AND_21810 [Anopheles darlingi]
Length = 440
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 73/161 (45%), Gaps = 20/161 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC----GDPNSVLRFAFVEFTDEE 229
+E +T+YV ++D VTEE L TLF G V C+I DP +AF+E+
Sbjct: 3 EESYPKTLYVGNLDTSVTEELLCTLFSQMGTVKSCKIIREASNDP-----YAFIEYASHT 57
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
A+ A LA F+ + + A +P N P+++ + I+ ++ ++
Sbjct: 58 SAQTA--LAAMNKRFFLKKEIKVNWATSPGN---QPKTDTSQHY---HIFVGDLSPEIET 109
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
++ F GE+ R++ D Q S AFV F +E
Sbjct: 110 ETLREAFAPF-GEISNCRIVRDPQTLKSRGYAFVSFVKKAE 149
>gi|410984123|ref|XP_003998381.1| PREDICTED: embryonic polyadenylate-binding protein 2 [Felis catus]
Length = 277
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 8/103 (7%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLR 219
C +Q E R+VYV ++D T E+L F +CG+V + C + G P
Sbjct: 132 TCPGPPTEQLESDHRSVYVGNVDYGGTAEELEAYFNSCGEVHRVTILCDKFSGHPKG--- 188
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
+A++EF E A+AA++L ++ ++VLP +T + ++ T
Sbjct: 189 YAYIEFAAESSAQAAVALDKSIFRGRVIKVLPKRTNLPGISST 231
>gi|413947084|gb|AFW79733.1| hypothetical protein ZEAMMB73_180978 [Zea mays]
Length = 787
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 9/89 (10%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
A + + ++RTV +S++ +T + + LF CG+VVDC I + A+VE++ E
Sbjct: 332 KADEADALKRTVQISNLSPLLTVDYVKQLFGLCGKVVDCTITDSKH----IAYVEYSKPE 387
Query: 230 GARAALSLAGTMLGFYPVRV-----LPSK 253
A AAL +G P+ V LPSK
Sbjct: 388 EATAALEFNNKNVGGRPLNVEMAKSLPSK 416
>gi|255941952|ref|XP_002561745.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586368|emb|CAP94118.1| Pc16g14480 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 562
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 71/163 (43%), Gaps = 20/163 (12%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
+DE RRT++V + ++ + L T F G V D +I D S +VEF +EE
Sbjct: 167 EDERDRRTIFVQQLAARLRIKDLFTFFEKAGPVKDAQIVKDRVSGRSKGVGYVEFKNEES 226
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIYCTN 282
AA+ L G ML P+ IA + R E S +Y N
Sbjct: 227 VAAAIRLTGQMLLGIPI--------IAQLTEAEKNRQARNTESTSGHHHTAPFHRLYVGN 278
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFA 324
+ +T+ D+ FE GE++ ++L D S AFV+FA
Sbjct: 279 VHFSITEEDLTNVFEPF-GELEFVQLQKDETGRSKGYAFVQFA 320
>gi|154322639|ref|XP_001560634.1| hypothetical protein BC1G_00662 [Botryotinia fuckeliana B05.10]
gi|347837181|emb|CCD51753.1| hypothetical protein [Botryotinia fuckeliana]
Length = 570
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 171 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 227
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE AA+ L G L P+ ++ ++ NP + + ++ +Y NI
Sbjct: 228 EESVPAAIQLTGQRLLGIPIIAQLTEAEKNRQVRNPEAT--TSNPNQIPFHRLYVGNIHF 285
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+T+ D++ FE GE++ ++L + Q +R FV+F
Sbjct: 286 SITESDLQNVFEPF-GELEFVQLQKEEQGRSRGYGFVQF 323
>gi|26328001|dbj|BAC27741.1| unnamed protein product [Mus musculus]
Length = 292
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 161 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 217
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|17505625|ref|NP_492504.1| Protein PABP-2 [Caenorhabditis elegans]
gi|3874370|emb|CAB02750.1| Protein PABP-2 [Caenorhabditis elegans]
Length = 205
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E ++VYV ++D T E++ F CG V + C R G P FA+VEFT
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVSRVTIQCDRFSGHPKG---FAYVEFT 127
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
++EG + AL++ ++L ++V P +T
Sbjct: 128 EKEGMQNALAMTDSLLRGRQIKVDPKRT 155
>gi|340714141|ref|XP_003395590.1| PREDICTED: hypothetical protein LOC100644519 [Bombus terrestris]
Length = 628
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 33/154 (21%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR------------------- 219
RT++V ++ + VT++QL LF G++ R+ G + L
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNDLHPKMKSV 401
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
+A++ F EE + ALS+ GT VRV S +S D+ E ++++
Sbjct: 402 YAYIRFESEESTKKALSINGTKFEGNYVRVDMS------------TKSNDKYE-TKKSVF 448
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
N+ V ++ F+ CGE+Q +R++ D Q
Sbjct: 449 IGNLHFNVDDDSVRNHFKR-CGEIQSVRIIRDNQ 481
>gi|148704375|gb|EDL36322.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Mus musculus]
Length = 294
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 163 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 219
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 220 DKESVRTSLALDESLFRGRQIKVIPKRT 247
>gi|395513917|ref|XP_003761168.1| PREDICTED: LOW QUALITY PROTEIN: probable RNA-binding protein 19
[Sarcophilus harrisii]
Length = 954
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 66/135 (48%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE L +F G V C + N + F FVE+ E A+ A
Sbjct: 718 TLFIKNLNFSTTEEMLKEVFSKVGTVKSCTVSKKKNKAGVLLSMGFGFVEYRKPEQAQKA 777
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G+++ + + V S+ AI PV + R ++ S+ I NI + + +I+
Sbjct: 778 LKQLQGSVVDGHKLEVKISERAIKPVVTSARQRQTAHKQKTSK-ILVRNIPFQANKQEIR 836
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 837 ELF-STFGELKTVRL 850
>gi|168057049|ref|XP_001780529.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162668007|gb|EDQ54623.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 647
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 55/116 (47%), Gaps = 13/116 (11%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
++ + +VYV D++ V+E QL +F G VV R+C D L +A+V + + A
Sbjct: 19 NQFVSTSVYVGDLEHNVSEAQLYEIFSQTGPVVSIRVCRDLITRRSLGYAYVNYHSAQDA 78
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
AL L L F PV P + + +P+ R+ + I+ N+DK +
Sbjct: 79 TRALEL----LNFTPVNGKPIRIMFSHRDPSL-------RKSGAANIFIKNLDKAI 123
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 46/104 (44%), Gaps = 19/104 (18%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ DP R + FV F T EE RA +
Sbjct: 308 LYLKNLDDAVDDEKLRELFAEYGTITSCKVMKDPQGQSRGSGFVAFSTPEEATRAVTEMN 367
Query: 239 GTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 265
M+G P+ V + +T + P PT LP
Sbjct: 368 TKMVGSKPLYVALAQRKEERRVRLQAAFAQMRTPVGPTVPTSLP 411
>gi|19113513|ref|NP_596721.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe
972h-]
gi|74698432|sp|Q9USY2.1|YOW4_SCHPO RecName: Full=Uncharacterized RNA-binding protein C1861.04c
gi|5734577|emb|CAB52740.1| RNA-binding protein Prp24 (predicted) [Schizosaccharomyces pombe]
Length = 1014
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 63/130 (48%), Gaps = 11/130 (8%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLAG 239
+YV++ E + LF G VVD R N+ RF +V+ + A AL L
Sbjct: 668 LYVTNFPPTYDELDITKLFSAYGNVVDVRFPSLRYNTNRRFCYVQMRKPDEAHNALQLHK 727
Query: 240 TML-GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
+L YP++V S P+ T PRS E R +Y TNID KV + D++ FF
Sbjct: 728 KLLEEKYPIQVFISD----PLRRT--PRSGAVYE--GRELYVTNIDFKVNEKDVETFFRD 779
Query: 299 VCGEVQRLRL 308
G+V+ +R+
Sbjct: 780 Y-GQVESVRI 788
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 25/165 (15%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
R +YV++ID +V E+ + T F GQV RI N F +V T + A ALS A
Sbjct: 757 RELYVTNIDFKVNEKDVETFFRDYGQVESVRIPKRFNQHKGFGYVVMTTNQDAENALSAA 816
Query: 239 GTMLGFYPVRVLPS-------KTAIAPVNPTFLPRSEDERE-------------MCSRTI 278
G LG + V+ S KT ++ + L +S + E + S+++
Sbjct: 817 GKQLGNRVLNVVLSKPRESLEKTRVSSNDNRTLAKSFETTESNKMSTPKKSFEQIKSKSL 876
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
TN+D V + ++ FES G++ R+ L +++ A VEF
Sbjct: 877 GVTNVDGTVNEARLRSLFESY-GKLYRVVLHPEHEG----AVVEF 916
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 268 EDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVS 327
E R T+ TN+ +++ ++K+FF+ CG + R+ +L D Q ++A +EF+ S
Sbjct: 582 EQHRNREELTVLVTNLPSDISENELKIFFKD-CGNIIRIFILEDNQKDVKVAQIEFSETS 640
Query: 328 E 328
E
Sbjct: 641 E 641
>gi|201860272|ref|NP_001128480.1| polyadenylate-binding protein 2 [Rattus norvegicus]
gi|149063929|gb|EDM14199.1| poly(A) binding protein, nuclear 1, isoform CRA_a [Rattus
norvegicus]
Length = 302
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 161 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 217
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 218 DKESVRTSLALDESLFRGRQIKVIPKRT 245
>gi|217074578|gb|ACJ85649.1| unknown [Medicago truncatula]
gi|388499396|gb|AFK37764.1| unknown [Medicago truncatula]
Length = 365
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/183 (25%), Positives = 79/183 (43%), Gaps = 28/183 (15%)
Query: 162 RRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
RR + N + + E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 182 RRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 241
Query: 219 R--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------TAIAPVNPTFLP 265
++EF D A++L+G +L PV V PS+ + A V P
Sbjct: 242 SKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASSGAAVVGPYG-- 299
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
R +Y N+ +T+ +++ FE G+++ ++L D + H FV+F
Sbjct: 300 -------AVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMETGHCKGFGFVQF 351
Query: 324 AMV 326
A +
Sbjct: 352 AHL 354
>gi|357473909|ref|XP_003607239.1| RNA-binding protein [Medicago truncatula]
gi|355508294|gb|AES89436.1| RNA-binding protein [Medicago truncatula]
Length = 635
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 376 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 435
Query: 238 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 294
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 436 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 494
Query: 295 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
F CGE R+ + D++ +S A+++F
Sbjct: 495 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDF 528
>gi|322795213|gb|EFZ18035.1| hypothetical protein SINV_11488 [Solenopsis invicta]
Length = 455
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 72/157 (45%), Gaps = 12/157 (7%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 75 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQC--A 131
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
A +LA + + + A +P N L S I+ ++ ++ +K
Sbjct: 132 ATALAAMNKRSFLEKEMKVNWATSPGNQPKLDTSNHHH------IFVGDLSPEIETQTLK 185
Query: 294 LFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
F GE+ R++ D Q S AFV F SE
Sbjct: 186 EAFAPF-GEISNCRIVRDPQTLKSKGYAFVSFVKKSE 221
>gi|431907175|gb|ELK11241.1| Polyadenylate-binding protein 2 [Pteropus alecto]
Length = 208
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 74 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 130
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 131 SLALDESLFRGRQIKVIPKRT 151
>gi|357473911|ref|XP_003607240.1| RNA-binding protein [Medicago truncatula]
gi|355508295|gb|AES89437.1| RNA-binding protein [Medicago truncatula]
Length = 623
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 10/154 (6%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V + F CG+VVD R D + F VEF E A++AL +
Sbjct: 364 KTLFVGNLSFSVQRSDIEKFFQDCGEVVDVRFSSDEEGRFKGFGHVEFASAEAAQSALEM 423
Query: 238 AGTMLGFYPVR--VLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL- 294
G L VR + + A P N + R S+T++ DK + + +I+
Sbjct: 424 NGQELLQRAVRLDLARERGAFTPNNNSNYSAQSGGRGQ-SQTVFVRGFDKNLGEDEIRAK 482
Query: 295 ---FFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
F CGE R+ + D++ +S A+++F
Sbjct: 483 LMEHFGGTCGEPTRVSIPKDFESGYSKGFAYMDF 516
>gi|255554000|ref|XP_002518040.1| conserved hypothetical protein [Ricinus communis]
gi|223542636|gb|EEF44173.1| conserved hypothetical protein [Ricinus communis]
Length = 946
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 56/101 (55%), Gaps = 10/101 (9%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A +++ +++T+ VS++ +T +QL LF G VV+C I + FA++E++ E
Sbjct: 342 AGKEDTLKKTLQVSNLSPLLTVDQLKQLFSYFGSVVECSITDSKH----FAYIEYSKPEE 397
Query: 231 ARAALSLAGTMLGFYPVRV-----LPSKTAI-APVNPTFLP 265
A AAL+L +G P+ V LP K+ + + V + LP
Sbjct: 398 ATAALALNNMDVGGRPLNVEMAKSLPQKSLLNSSVASSSLP 438
>gi|157093141|gb|ABV22225.1| RNA recognition motif protein [Karlodinium micrum]
Length = 197
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEG 230
++EV +R+VY+ +D T E+L F +CGQ+ I D S FA+VEF DE+
Sbjct: 55 REEVDKRSVYIGSVDYGSTPEELQEHFKSCGQINRITILVDKYSGHPKGFAYVEFADEQS 114
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
+ +L L G++ ++V+ +T + P FL
Sbjct: 115 VQNSLLLNGSLFRGRQLKVMQKRTNV----PGFL 144
>gi|255572313|ref|XP_002527095.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223533518|gb|EEF35258.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 657
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 58/122 (47%), Gaps = 18/122 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D++Q V EEQL LF QVV R+C D S L + +V F++ ++ A A +
Sbjct: 46 SLYVGDLEQNVNEEQLYDLFSQIAQVVSVRVCRDQTKRSSLGYGYVNFSNPQDAANAMKA 105
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T L P+R++ F R R+ ++ N+D + D KL
Sbjct: 106 LNFTPLNGKPIRIM------------FSHRDPSIRKSGYGNVFIKNLDSTL---DNKLLH 150
Query: 297 ES 298
E+
Sbjct: 151 ET 152
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 72/168 (42%), Gaps = 22/168 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ V++ ++D + + L F G V+ C++ D N + +
Sbjct: 116 IRIMFSHRDPSIRKSGYGNVFIKNLDSTLDNKLLHETFAAFGTVLSCKVAVDSNGQSKGY 175
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A A+S L G L V V F+ + E R S
Sbjct: 176 GFVQFENEESAERAISFLDGMCLNDKQVYV-----------GFFVRQQERTRTNGSPKFT 224
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N+ + +T D++ F V G + ++ D +R FV F
Sbjct: 225 NVYVKNLSETITNEDLEKVF-GVYGTITSALVMKDQTGKSRGFGFVNF 271
>gi|403339762|gb|EJY69142.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 1016
Score = 50.4 bits (119), Expect = 0.001, Method: Composition-based stats.
Identities = 38/147 (25%), Positives = 71/147 (48%), Gaps = 15/147 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SL 237
TVYV + Q E++L F G + R+ +PN L+ F +++F ++ + A+ SL
Sbjct: 736 TVYVHGLPQTCNEQKLREHFKEIGDIEQVRLIRNPNGTLKGFGYIQFLSKKSVQVAIESL 795
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+ + + V +K+ ++ RE T++ N+D ++ ++K + E
Sbjct: 796 NKSKIDNRTISVERNKS------------KKEAREDIGFTVFVKNLDYHTSEDELKSYSE 843
Query: 298 SVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
GEV+R+ L D + HS F+EF
Sbjct: 844 DNFGEVKRVTLSKDEKGHSKGHGFIEF 870
>gi|339245105|ref|XP_003378478.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316972604|gb|EFV56277.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 561
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFV 223
+ ++ EV R+V+V ++D T EQL F CG + + C R G P FA+V
Sbjct: 77 TTEEKIEVDSRSVFVGNVDYGATAEQLEAHFHGCGAINRVTILCDRYSGRPKG---FAYV 133
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKT 254
EF D+E A+A+L++ T+ ++VL +T
Sbjct: 134 EFADKESAQASLAMTDTLFRGRQIKVLEKRT 164
>gi|169599154|ref|XP_001793000.1| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
gi|160704547|gb|EAT90605.2| hypothetical protein SNOG_02393 [Phaeosphaeria nodorum SN15]
Length = 544
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+D+ +RT++V I Q+ L F T G Q+V R+ G V +VEF D
Sbjct: 144 EDDRDKRTIFVQQISQRALTHHLLAFFETVGPVIEAQIVKDRVTGRSKGV---GYVEFKD 200
Query: 228 EEGARAALSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
EE AL L G L P+ L P+ + +Y NI
Sbjct: 201 EESVAKALELTGQKLKGVPIIAQLTEAEKNRAARPSEGGAAPGANGAPFHRLYVGNIHFS 260
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEF 323
VT+ D+ F + GE++++ L D + R FV+F
Sbjct: 261 VTEQDLHTIF-APFGELEQVTLQRDETNPARSKGYGFVQF 299
>gi|340939192|gb|EGS19814.1| hypothetical protein CTHT_0042990 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 777
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 77/171 (45%), Gaps = 24/171 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D + + L F G ++ C++ D N + +
Sbjct: 139 CRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVATDENGNSKGY 198
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 199 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 247
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
+Y NI+ +VT+ + + FF S GE+ L D + R FV ++
Sbjct: 248 YTNVYIKNINLEVTEEEFREFF-SKWGEITSSTLARDAEGKPRGFGFVNYS 297
Score = 40.0 bits (92), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 69 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSVADGEKALEE 128
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 129 LNYTLIKGKPCRIMWSQ 145
>gi|357519763|ref|XP_003630170.1| RNA-binding protein [Medicago truncatula]
gi|355524192|gb|AET04646.1| RNA-binding protein [Medicago truncatula]
Length = 567
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/194 (24%), Positives = 85/194 (43%), Gaps = 28/194 (14%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
R +R+ ++ RR + N + + E +RTV+ + + TE + F G+V D
Sbjct: 171 RGERDFENRDGRRFRDKKENVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRD 230
Query: 208 CRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK-----------T 254
R+ D NS ++EF D A++L+G +L PV V PS+ +
Sbjct: 231 VRLIMDRNSRRSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASS 290
Query: 255 AIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ- 313
A V P R +Y N+ +T+ +++ FE G+++ ++L D +
Sbjct: 291 GAAVVGPYG---------AVDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMET 340
Query: 314 -HSTRIAFVEFAMV 326
H FV+FA +
Sbjct: 341 GHCKGFGFVQFAHL 354
>gi|449691485|ref|XP_002170081.2| PREDICTED: uncharacterized protein LOC100212876, partial [Hydra
magnipapillata]
Length = 312
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 52/102 (50%), Gaps = 10/102 (9%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-GDPNSVLRFAFVEFT 226
T++ + + IRRTV+V +I +T +QL F G+V R+C GD ++AFVEFT
Sbjct: 14 TTDPVEIDEIRRTVFVQNIPPDITADQLMAFFSGVGEVKYLRLCKGDSG---KYAFVEFT 70
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE 268
+ AL G + G ++V SK +P P SE
Sbjct: 71 AIDSVPTALQYNGVLFGGRCLKVDYSK------HPIIKPESE 106
>gi|406606068|emb|CCH42541.1| Polyadenylate-binding protein 1 [Wickerhamomyces ciferrii]
Length = 787
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/75 (32%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF-TDEEGARAALS 236
T+YV D+DQ+VTE+ L++LF + ++C P + L + +V F +D + RA
Sbjct: 136 TLYVGDLDQKVTEKSLSSLFTKYESFLSAKLCYSPTTRLSLGYGYVNFSSDTDANRATED 195
Query: 237 LAGTMLGFYPVRVLP 251
L T++ +R++P
Sbjct: 196 LNYTLVANKEIRIMP 210
>gi|413918857|gb|AFW58789.1| hypothetical protein ZEAMMB73_983608 [Zea mays]
Length = 412
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDE-EGARAALS 236
++YV D++ V++ QL LF GQVV R+C D S L +A+V +++ + ARA
Sbjct: 35 SLYVGDLEGAVSDSQLYELFSQAGQVVSVRVCRDVTSRRSLGYAYVNYSNPLDAARALEV 94
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P+RV+ S R R S I+ N+DK + + F
Sbjct: 95 LNFAALNNKPIRVMYSN------------RDPSSRRSGSANIFIKNLDKTIDNKTLHETF 142
Query: 297 ES 298
S
Sbjct: 143 SS 144
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 54/120 (45%), Gaps = 15/120 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ +Y+ ++D + ++QL LF G++ ++ D N + +
Sbjct: 299 KRRFEQSLKDAA-DKYQGLNLYLKNLDDSIGDDQLCELFSNFGKITSYKVMRDQNGLSKG 357
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI 278
+ FV F T EE ++A + G M+ P+ V F R ED + M T+
Sbjct: 358 SGFVAFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAMLQVTV 405
>gi|147835778|emb|CAN72942.1| hypothetical protein VITISV_011270 [Vitis vinifera]
Length = 185
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 74/162 (45%), Gaps = 14/162 (8%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS-- 216
QG + A ++ + ++YV D++ V + QL LF G VV R+C D ++
Sbjct: 10 QGPGPAPNSAAGAGGNQFVTTSLYVGDLELNVNDPQLYDLFNQMGAVVSVRVCRDLSTRR 69
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L + +V +++ + A AL + L F P+ P + + +P+ R+ +
Sbjct: 70 SLGYGYVNYSNPQDAARALDV----LNFTPLNGKPLRIMYSHCDPSI-------RKSGTG 118
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRI 318
I+ N+DK + + F S G + + L YQ++ R+
Sbjct: 119 NIFIKNLDKGIDHKALHDTF-SAFGNILSCKDLDTYQNNMRL 159
>gi|326492626|dbj|BAJ90169.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326511122|dbj|BAJ87575.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 663
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 52/109 (47%), Gaps = 13/109 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLA 238
+YV D+D V + QL +F G VV R+C D N+ L +A+V F+ A AL
Sbjct: 44 LYVGDLDVSVQDAQLFDVFSQVGSVVSVRVCRDVNTRMSLGYAYVNFSSPADAARALE-- 101
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
ML F PV P + + +P+ R+ + I+ N+DK +
Sbjct: 102 --MLNFTPVNGKPIRIMYSNRDPS-------SRKSGAANIFIKNLDKSI 141
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 181 VYVSDIDQQVTE-EQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSL 237
+Y+ ++D V + E+L LF G + C++ D N V + + FV F + E+ RA +++
Sbjct: 326 LYLKNLDGSVDDDEKLKELFAEFGTITSCKVMRDSNGVNKGSGFVAFKSSEDATRALVAM 385
Query: 238 AGTMLGFYPVRV 249
G M+G P+ V
Sbjct: 386 NGKMVGSKPLYV 397
>gi|291403571|ref|XP_002717950.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Oryctolagus
cuniculus]
Length = 366
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 232 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 288
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 289 SLALDESLFRGRQIKVIPKRT 309
>gi|168053933|ref|XP_001779388.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669186|gb|EDQ55778.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 650
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 54/114 (47%), Gaps = 15/114 (13%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 234
+ ++YV D++ V+E QL LF GQVV R+C D L +A+V + + A A
Sbjct: 26 VSTSLYVGDLEPNVSEAQLYELFTQVGQVVSIRVCRDLITRRSLGYAYVNYNSAQDATRA 85
Query: 235 LSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L L ++L P+R++ F R R+ + I+ N+DK +
Sbjct: 86 LELLNFSVLNGNPIRIM------------FSHRDPSIRKSGTANIFIKNLDKTI 127
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 49/104 (47%), Gaps = 19/104 (18%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ DP R + FV F+ EE RA +
Sbjct: 312 LYLKNLDDTVDDEKLRELFADYGTITSCKVMRDPQGQSRGSGFVAFSSPEEATRAVTEMN 371
Query: 239 GTMLGFYPVRVLPS-----------------KTAIAPVNPTFLP 265
G M+G P+ V + +T+++P PT LP
Sbjct: 372 GKMVGSKPLYVALAQRKEERRARLQAAFAQMRTSVSPAVPTSLP 415
>gi|1737492|gb|AAB38974.1| poly(A)-binding protein [Triticum aestivum]
Length = 651
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D S L +A+V + A AL
Sbjct: 33 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 91
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 92 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 138
Query: 298 SVC 300
+ C
Sbjct: 139 TFC 141
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 29/140 (20%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ +++ ++D+ + + L F G ++ C++ DP + +
Sbjct: 103 IRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALYDTFCVFGNILSCKVATDPAGESKGY 162
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDERE---MCSR 276
FV++ +E A AA+ L G ++ V V P F+ + E + +
Sbjct: 163 GFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP-----------FVRKQERDNSPGNVKFN 211
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 212 NVYVKNLAETTTEDDLKEIF 231
Score = 37.4 bits (85), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ D N R + FV F + ++ +RA +
Sbjct: 316 LYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMN 375
Query: 239 GTMLGFYPVRV 249
M+G P+ V
Sbjct: 376 NKMVGNKPLYV 386
>gi|402084391|gb|EJT79409.1| RNA splicing factor Pad-1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 601
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 67/157 (42%), Gaps = 7/157 (4%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ ++L F G V +I D N +VEF EE
Sbjct: 204 EDERDRRTVFVQQLAARLRTKELHEFFEQAGPVAAAQIVKDRVSNRSKGVGYVEFKSEES 263
Query: 231 ARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
AAL L G L PV V P+ K + + +Y NI +
Sbjct: 264 LPAALQLTGQKLAGIPVIVQPTEAEKNRQVRTTENSNANGAQQNSVLFHRLYVGNIHFSI 323
Query: 288 TQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
T+ D++ F GE++ ++L + +R FVE+
Sbjct: 324 TEPDLRTVF-GPFGELRFVQLQKEDNGRSRGYGFVEY 359
Score = 44.3 bits (103), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 45/87 (51%), Gaps = 2/87 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N + AQQ+ V+ +YV +I +TE L T+F G++ ++ + N R + FV
Sbjct: 298 NSNANGAQQNSVLFHRLYVGNIHFSITEPDLRTVFGPFGELRFVQLQKEDNGRSRGYGFV 357
Query: 224 EFTDEEGARAAL-SLAGTMLGFYPVRV 249
E+ D AR AL + G L P+RV
Sbjct: 358 EYNDPANAREALEKMNGFDLAGRPIRV 384
>gi|221054742|ref|XP_002258510.1| rna-binding protein [Plasmodium knowlesi strain H]
gi|193808579|emb|CAQ39282.1| rna-binding protein, putative [Plasmodium knowlesi strain H]
Length = 202
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 56/110 (50%), Gaps = 15/110 (13%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEE 229
+Q+E+ R+++V ++D E+L +LF CG + I + N+ +A++EF D
Sbjct: 64 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 123
Query: 230 GARAALSLAGTMLGFYPVRV------LP--SKTAIAP-----VNPTFLPR 266
R ALSL+ + ++V +P ++ I+P + P+F PR
Sbjct: 124 SVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPRISPFRGRSIKPSFAPR 173
>gi|327287898|ref|XP_003228665.1| PREDICTED: polyadenylate-binding protein 2-like [Anolis
carolinensis]
Length = 196
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 61 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYIEFSDKESVRT 117
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 118 SLALDESLFRGRQIKVIPKRT 138
>gi|342878966|gb|EGU80243.1| hypothetical protein FOXB_09170 [Fusarium oxysporum Fo5176]
Length = 1079
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 72/154 (46%), Gaps = 16/154 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TVYV++ ++ + LF CG+++ R+ ++ RF +V F D+E + A+
Sbjct: 678 TVYVANYPPAADQKYIRDLFKDCGEILSIRLPSLKVDARRRFCYVSFRDQEASAKAVKKD 737
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQGDIKLF 295
GT+L + + + P + RE R I+ +N+D+ T+ D+K
Sbjct: 738 GTVL----------EGGLKLLAKYSDPSHKKAREGALAEGREIHISNLDRTATEADLKEV 787
Query: 296 FESVCGEVQRLRLLGDYQHSTR-IAFVEFAMVSE 328
F S G V R+ L + T+ AF++FA E
Sbjct: 788 F-SKYGNVTRVNLPRNLVGKTKGFAFIDFATKEE 820
>gi|400234898|gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
Length = 643
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D VT+ QL LF GQVV R+C D S L + +V + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F P+ P + + +PT R + I+ N+DK +
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAI 126
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D +++++L LF G + C++ DP+ V + + FV F T EE +RA +
Sbjct: 311 LYLKNLDDSISDDKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSTPEEASRALSEMN 370
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 371 GKMVVSKPLYV 381
>gi|427789733|gb|JAA60318.1| Putative rox8 [Rhipicephalus pulchellus]
Length = 406
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
RT+YV ++D VTEE L +F GQV C+I +P + + FVEF+D + A +AL
Sbjct: 13 RTLYVGNLDTAVTEELLVAVFGQMGQVKGCKIIHEPGND-PYCFVEFSDHQSAASAL 68
Score = 45.4 bits (106), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 38/166 (22%), Positives = 70/166 (42%), Gaps = 20/166 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
D ++V D+ ++ QL F G + DCR+ DP ++ + FV F + A
Sbjct: 96 DTSKHHHIFVGDLSPEIETTQLRDAFAPFGDISDCRVVRDPQTLKSKGYGFVSFVKKADA 155
Query: 232 RAAL-SLAGTMLGF------YPVRVLPSKTAIAPVN------PTFLPRSEDEREMCSRTI 278
A+ ++ G LG + R P+ A V+ P ++ + T+
Sbjct: 156 ENAIGTMNGQWLGSRAIRTNWATRKPPANRTQAEVDITTSTKPLTFDEVYNQSSPTNCTV 215
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
YC I + +++ ++ F S G +Q +R+ D + AF+ F
Sbjct: 216 YCGGITQGLSEELMQKTFSSY-GAIQEIRVFKDKGY----AFIRFG 256
>gi|7673355|gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
Length = 649
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D VT+ QL LF GQVV R+C D S L + +V + + + A AL +
Sbjct: 28 SLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARALEV 87
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F P+ P + + +PT R + I+ N+DK +
Sbjct: 88 ----LNFTPLHGKPIRIMYSNRDPTI-------RRSGNGNIFIKNLDKAI 126
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+Y+ ++D +++E+L LF G + C++ DP+ V + + FV F++ EE +RA +
Sbjct: 311 LYIKNLDDSISDEKLKELFSPYGTITSCKVMRDPSGVSKGSGFVAFSNPEEASRALSEMN 370
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 371 GKMVVSKPLYV 381
>gi|146197780|dbj|BAF57609.1| polyadenylate-binding protein [Dugesia japonica]
Length = 216
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
+T+Y+S + VTEE L ++F G V C + NS A+VEF +E AR ALS+
Sbjct: 14 KTIYISCLPNSVTEEDLLSIFENYGLCVSCEL----NSEECTAYVEFDNETSARNALSMN 69
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G +G ++++ + + E E +M S+ D TQ +F +
Sbjct: 70 GIEMGATRIQII--------IAYDYTSAFEQEYQMNSKNFLGKTDDSTPTQ----IFVGN 117
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFAMVSEP 329
+ V L G ++H +I ++ ++ +P
Sbjct: 118 IGSNVDEAILEGGFEHLGKI--IDTKVIRDP 146
>gi|380088391|emb|CCC13655.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 606
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 68/154 (44%), Gaps = 4/154 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 179 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSEEH 238
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 239 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTESTGHHPNSIPFHRLYVGNIHFSITEQ 298
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
D++ FE GE++ ++L D +R FV++
Sbjct: 299 DLQNVFEPF-GELEFVQLQKDDNGRSRGYGFVQY 331
>gi|384491350|gb|EIE82546.1| hypothetical protein RO3G_07251 [Rhizopus delemar RA 99-880]
Length = 348
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 71/168 (42%), Gaps = 11/168 (6%)
Query: 154 RNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
R ++Q +N ++D V+V D+ ++ +E+LA F G + + + D
Sbjct: 92 RANWAQPSANINPPLQMTKEDTTNHFHVFVGDLAAEINDEKLAQAFSEFGTMSEAHVMWD 151
Query: 214 PNSVLR--FAFVEFTDEEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE 270
P S F FV F D+ A RA ++ G LG P+R + P P +
Sbjct: 152 PLSGKSRGFGFVAFRDKTDAERAIATMNGEWLGTRPIRCNWATQKGQTAMPAPQPGQQLP 211
Query: 271 REMCSR-------TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
E+ + +IY NI V+Q D+ F+ G VQ ++ D
Sbjct: 212 YEVVVQQTPAYVTSIYVGNIPLNVSQNDLVQPFQR-FGYVQEVKFQAD 258
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/107 (30%), Positives = 52/107 (48%), Gaps = 6/107 (5%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG----DPNSVLRFAFV 223
TSN + T+YV ++DQ+VT+ L +F T GQVV +I + + + FV
Sbjct: 7 TSNVAETTNPATTIYVGNLDQRVTDTMLNEIFTTVGQVVSVKIISVRKHNNFGAVNYGFV 66
Query: 224 EFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSED 269
EF D A A+ + G + Y +R ++ + A +NP ED
Sbjct: 67 EFADPRVAEQAIQDMNGRKIFNYEIRANWAQPS-ANINPPLQMTKED 112
>gi|255538240|ref|XP_002510185.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223550886|gb|EEF52372.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 658
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 67/147 (45%), Gaps = 15/147 (10%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D VT+ QL +F GQVV R+C D + L + +V +T + A AL +
Sbjct: 38 SLYVGDLDLNVTDSQLYDVFNQVGQVVSVRVCRDLTTRRSLGYGYVNYTSPQDAARALDI 97
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L F P P + + +P+ R+ + I+ N+DK + + F
Sbjct: 98 ----LNFTPFNNKPIRIMYSHRDPSI-------RKSGTGNIFIKNLDKTIDHKALHDTFS 146
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
S G + ++ D +R FV+F
Sbjct: 147 SF-GNILSCKVATDSSGQSRGYGFVQF 172
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D +++E L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 320 LYIKNLDDSISDENLKELFSDFGMITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 379
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 380 GKMVVSKPLYV 390
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 75/167 (44%), Gaps = 21/167 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F + G ++ C++ D + R +
Sbjct: 108 IRIMYSHRDPSIRKSGTGNIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDSSGQSRGY 167
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--T 277
FV+F +EE A+ A+ L G +L V V FL + E + +
Sbjct: 168 GFVQFDNEEAAQNAIDKLNGMLLNDKQVYV-----------GHFLRKHERDSASNKKFNN 216
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N+ + T+ D+K F GE+ ++ D ++ FV F
Sbjct: 217 VYVKNLSESTTEEDLKNIFGE-YGEITSAVIMRDADGKSKCFGFVNF 262
>gi|255582384|ref|XP_002531981.1| Protein gar2, putative [Ricinus communis]
gi|223528378|gb|EEF30417.1| Protein gar2, putative [Ricinus communis]
Length = 436
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 61/133 (45%), Gaps = 9/133 (6%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFT 226
S +Q E VYV I TEE + + F CG + VDC D A + F
Sbjct: 171 SESQISEDSATKVYVGGIPYYSTEEDIRSYFEGCGTITEVDCMTFPDSGKFRGIAIIGFK 230
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTA---IAPVNPTFLPRSEDEREMCSRTIYCTNI 283
E A+ AL+L G+ +G + +++ P KT A F P+ E +R IY N+
Sbjct: 231 TEAAAKRALALDGSDMGGFFLKIQPYKTTRTFQAKKVSDFAPKI---VEGYNR-IYVGNL 286
Query: 284 DKKVTQGDIKLFF 296
+T+ D++ FF
Sbjct: 287 SWDITEEDLRKFF 299
>gi|449454219|ref|XP_004144853.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
gi|449506986|ref|XP_004162902.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 562
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 77/179 (43%), Gaps = 11/179 (6%)
Query: 160 GKRRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS 216
G+R + + A+ + E +RTV+ I + TE + F G+V D R+ D NS
Sbjct: 156 GRRYKDKKDETAEPEADPERDQRTVFAYQISLKATERDVYEFFSRAGKVRDVRLIMDRNS 215
Query: 217 VLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+VEF D A++L+G +L PV V PS+ V T
Sbjct: 216 RRSKGVGYVEFVDAMSVPMAIALSGQLLLSQPVMVKPSEAEKNQVQSTSAAGGPGGAMGP 275
Query: 275 ----SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEFAMVSE 328
+R +Y N+ +T+ +++ F G V+ +++ D H F++F + +
Sbjct: 276 YSGGARRLYVGNLHPNITEDNLRQVF-GAFGTVELVQMPVDESGHCKGFGFIQFTRLED 333
>gi|326519747|dbj|BAK00246.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 368
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
ML Y P+RV + S+D++ + ++ N+D +V D KL
Sbjct: 86 L-NMLKLYGKPIRVNKA--------------SQDKKSLDVGANLFIGNLDPEV---DEKL 127
Query: 295 FFES 298
+++
Sbjct: 128 LYDT 131
>gi|357154719|ref|XP_003576878.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 653
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 16/123 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D + L +A+V + A AL
Sbjct: 35 SLYVGDLDMSVQDAQLFDVFAQIGGVVSVRVCRDVTTRKSLGYAYVNYNTPADAARALE- 93
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K ++
Sbjct: 94 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALYD 140
Query: 298 SVC 300
+ C
Sbjct: 141 TFC 143
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ D N R + FV F + E+ +RA +
Sbjct: 318 LYLKNLDDTVDDEKLRELFAEFGAITSCKVMRDSNGASRGSGFVAFKSAEDASRALAEMN 377
Query: 239 GTMLGFYPVRV 249
M+G P+ V
Sbjct: 378 NKMVGSKPLYV 388
>gi|357146461|ref|XP_003574000.1| PREDICTED: splicing factor 3B subunit 4-like [Brachypodium
distachyon]
Length = 359
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
ML Y P+RV + S+D++ + ++ N+D +V D KL
Sbjct: 86 L-NMLKLYGKPIRVNKA--------------SQDKKSLDVGANLFIGNLDPEV---DEKL 127
Query: 295 FFES 298
+++
Sbjct: 128 LYDT 131
>gi|354488039|ref|XP_003506178.1| PREDICTED: polyadenylate-binding protein 2-like [Cricetulus
griseus]
Length = 333
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 199 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 255
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 256 SLALDESLFRGRQIKVIPKRT 276
>gi|453085206|gb|EMF13249.1| polyadenylate binding protein [Mycosphaerella populorum SO2202]
Length = 760
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/168 (25%), Positives = 74/168 (44%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D + + L F G ++ C++ D + R +
Sbjct: 124 CRIMWSQRDPALRKTGHGNIFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDESGGSRGY 183
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A AA+ S+ G +L V V +P K ++ +E +
Sbjct: 184 GFVHYETAEAANAAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 234
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
IY NID + T + + FE GE+ L D + R FV +
Sbjct: 235 NIYVKNIDTETTDDEFRELFEKY-GEITSASLARDQEGKVRGFGFVNY 281
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 54 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 113
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 114 LNYTLIKGKPCRIMWSQ 130
>gi|417398942|gb|JAA46504.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 323
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 199 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 255
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 256 SLALDESLFRGRQIKVIPKRT 276
>gi|402218951|gb|EJT99026.1| hypothetical protein DACRYDRAFT_24111 [Dacryopinax sp. DJM-731 SS1]
Length = 1056
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 39/64 (60%), Gaps = 1/64 (1%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
+R VYV+ + + V +E+L LF G V + R+ P+ + + F FVEF DE GA AALS
Sbjct: 805 KREVYVAGLARGVKKEELEKLFGEKGSVKEVRLALGPDGLCKGFGFVEFQDEVGAEAALS 864
Query: 237 LAGT 240
L T
Sbjct: 865 LNNT 868
>gi|294940190|ref|XP_002782709.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239894589|gb|EER14504.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 716
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 82/196 (41%), Gaps = 24/196 (12%)
Query: 140 GTANTNGHTTTRRKRN----GYSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVT 191
G A N H +R YS K R CR + +D +RR+ VYV ++D+ +
Sbjct: 90 GYAYINFHNVADAERALDTLNYSPIKGR-PCRLMWSHRDPALRRSGAGNVYVKNLDRNID 148
Query: 192 EEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS-LAGTMLGFYPVRV 249
+ L F G ++ C++ P+ R F FV F +E A AA++ L G +G V V
Sbjct: 149 NKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYV 208
Query: 250 LP-SKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
P KTA D +Y +I + IK F GE+ L +
Sbjct: 209 APFKKTA----------ERNDGTPKNFTNVYIKHIPASWNEEKIKEEF-GAFGEITSLAV 257
Query: 309 LGDYQHSTRIAFVEFA 324
D + R AFV +A
Sbjct: 258 QTDPK-GRRFAFVNYA 272
>gi|167518059|ref|XP_001743370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778469|gb|EDQ92084.1| predicted protein [Monosiga brevicollis MX1]
Length = 400
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 1/71 (1%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
+ DE +RRT+YV ++ +E + + TCG + RI DP+ RF FVEF E
Sbjct: 153 KMDE-MRRTLYVGNLALHTKQEDVVKVMATCGTIKQARIVMDPSRQARFCFVEFAHIEDV 211
Query: 232 RAALSLAGTML 242
L+L ++L
Sbjct: 212 ATGLTLNNSLL 222
>gi|315434255|ref|NP_001186793.1| BCL2L2-PABPN1 protein [Homo sapiens]
gi|332223067|ref|XP_003260692.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1 [Nomascus
leucogenys]
gi|338717165|ref|XP_003363601.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Equus
caballus]
gi|397473278|ref|XP_003808142.1| PREDICTED: polyadenylate-binding protein 2 [Pan paniscus]
gi|403264162|ref|XP_003924360.1| PREDICTED: polyadenylate-binding protein 2 [Saimiri boliviensis
boliviensis]
gi|410961928|ref|XP_003987530.1| PREDICTED: polyadenylate-binding protein 2 isoform 3 [Felis catus]
gi|426232740|ref|XP_004010379.1| PREDICTED: polyadenylate-binding protein 2 [Ovis aries]
gi|410267786|gb|JAA21859.1| BCL2L2-PABPN1 readthrough [Pan troglodytes]
gi|417399112|gb|JAA46586.1| Putative splicing factor rnps1 sr protein superfamily [Desmodus
rotundus]
Length = 333
Score = 50.1 bits (118), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 199 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 255
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 256 SLALDESLFRGRQIKVIPKRT 276
>gi|449296279|gb|EMC92299.1| hypothetical protein BAUCODRAFT_38330 [Baudoinia compniacensis UAMH
10762]
Length = 634
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 20/161 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
DE RRTV+V + ++ ++L F G VV+ +I D S +VEF DEE
Sbjct: 242 DERDRRTVFVQQLAARLRTKELQAFFEAVGPVVEAQIVKDRVSGRSKGVGYVEFKDEESV 301
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIYCTNI 283
+ A+ L G L P+ IA + R E + +Y NI
Sbjct: 302 QKAIQLTGQKLLGIPI--------IAQLTEAEKNRQARHTEGTATQSNGIPFHRLYVGNI 353
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
+T+ D+K FE GE++ ++L + Q S FV+F
Sbjct: 354 HFSITEDDLKNVFEPF-GELEFVQLQKEEQGRSKGYGFVQF 393
>gi|294884876|gb|ADF47446.1| TIA1-like protein, partial [Dugesia japonica]
Length = 443
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 70/151 (46%), Gaps = 18/151 (11%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
+T+Y+S + VTEE L ++F G V C + NS A+VEF +E AR ALS+
Sbjct: 24 KTIYISCLPNSVTEEDLLSIFENYGLCVSCEL----NSEECTAYVEFDNETSARNALSMN 79
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G +G ++++ + + E E +M S+ D TQ +F +
Sbjct: 80 GIEMGATRIQII--------IAYDYTSAFEQEYQMNSKNFLGKTDDSTPTQ----IFVGN 127
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFAMVSEP 329
+ V L G ++H +I ++ ++ +P
Sbjct: 128 IGSNVDEAILEGGFEHLGKI--IDTKVIRDP 156
>gi|255074269|ref|XP_002500809.1| predicted protein [Micromonas sp. RCC299]
gi|226516072|gb|ACO62067.1| predicted protein [Micromonas sp. RCC299]
Length = 456
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 41/83 (49%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
D + RTVY +++ +TE+ LA F G V + G + RF FVEF + A +
Sbjct: 235 DSDVSRTVYAGNVNSSITEDMLADFFSIAGNVTYVKFAGSEFNPSRFGFVEFDTKAAAES 294
Query: 234 ALSLAGTMLGFYPVRVLPSKTAI 256
A +L GT + ++V S I
Sbjct: 295 AKALTGTQVAEMTIKVKHSNNPI 317
>gi|294889687|ref|XP_002772922.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239877502|gb|EER04738.1| polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 715
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 82/196 (41%), Gaps = 24/196 (12%)
Query: 140 GTANTNGHTTTRRKRN----GYSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVT 191
G A N H +R YS K R CR + +D +RR+ VYV ++D+ +
Sbjct: 90 GYAYINFHNVADAERALDTLNYSPIKGR-PCRLMWSHRDPALRRSGAGNVYVKNLDRNID 148
Query: 192 EEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS-LAGTMLGFYPVRV 249
+ L F G ++ C++ P+ R F FV F +E A AA++ L G +G V V
Sbjct: 149 NKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHFESDESAEAAIAKLNGMQIGEKTVYV 208
Query: 250 LP-SKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL 308
P KTA D +Y +I + IK F GE+ L +
Sbjct: 209 APFKKTA----------ERNDGTPKNFTNVYIKHIPASWNEEKIKEEF-GAFGEITSLAV 257
Query: 309 LGDYQHSTRIAFVEFA 324
D + R AFV +A
Sbjct: 258 QTDPK-GRRFAFVNYA 272
>gi|125549781|gb|EAY95603.1| hypothetical protein OsI_17455 [Oryza sativa Indica Group]
Length = 667
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 63/146 (43%), Gaps = 16/146 (10%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
+T++V ++ V +EQ+ F G+VVD R + R F VEF E A+ AL L
Sbjct: 436 KTLFVGNLPYNVEQEQVKQFFQEAGEVVDIRFSTFEDGNFRGFGHVEFATAEAAKKALEL 495
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQG 290
AG L PVR+ +A + P S + + TI+ D +
Sbjct: 496 AGHDLMGRPVRL-----DLARERGAYTPGSGRDNSSFKKPAQSSGNTIFIKGFDTSLDIH 550
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ 313
I+ E CGE+ R+ + DY+
Sbjct: 551 QIRNSLEEHFGSCGEITRVSIPKDYE 576
>gi|169768824|ref|XP_001818882.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus oryzae RIB40]
gi|238498168|ref|XP_002380319.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|83766740|dbj|BAE56880.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220693593|gb|EED49938.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus flavus NRRL3357]
gi|391874569|gb|EIT83434.1| RRM domain protein [Aspergillus oryzae 3.042]
Length = 477
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +DQ+VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 86 EPNKRALYVGGLDQRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 145
Query: 231 A-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVT 288
A RA +L G + +R VN + S ++ + + I+ ++ +V
Sbjct: 146 AERAMQTLNGRRIHQSEIR----------VNWAYQSNSTNKEDTSNHFHIFVGDLSNEVN 195
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
++ F S G V R++ D + S FV F
Sbjct: 196 DEILQQAF-SAFGSVSEARVMWDMKTGRSRGYGFVAF 231
>gi|171690010|ref|XP_001909937.1| hypothetical protein [Podospora anserina S mat+]
gi|170944960|emb|CAP71071.1| unnamed protein product [Podospora anserina S mat+]
Length = 565
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 71/166 (42%), Gaps = 28/166 (16%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ ++L F G V + +I D N +VEF +E+
Sbjct: 173 EDERDRRTVFVQQLAARLRTKELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKNEDS 232
Query: 231 ARAALSLAGTMLGFYPVRVL------------PSKTAIAPVNPTFLPRSEDEREMCSRTI 278
+AAL L G L PV V P T P + F +
Sbjct: 233 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRNPDATGNHPNSIPF------------HRL 280
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
Y NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 281 YVGNIHFSITEQDLQNVFEPF-GELEFVQLQKDDTGRSRGYGFVQF 325
>gi|10334491|emb|CAC10207.1| putative splicing factor [Cicer arietinum]
Length = 392
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 80/186 (43%), Gaps = 16/186 (8%)
Query: 162 RRMNCRTSNAQQD---EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
RR + N + + E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 6 RRFRDKKDNVEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 65
Query: 219 R--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREM 273
++EF D A++L+G +L PV V PS K + +
Sbjct: 66 SKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNATSGAAGVTGPYGA 125
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMV----- 326
R +Y N+ +T+ +++ FE G+++ ++L D + H FV+FA +
Sbjct: 126 VDRKLYVGNLHFNMTEANLREIFEPF-GQIEVVQLPLDMETGHCKGFGFVQFAHLEHAKA 184
Query: 327 SEPFSW 332
S F W
Sbjct: 185 SSEFKW 190
>gi|17537143|ref|NP_496718.1| Protein TIAR-2 [Caenorhabditis elegans]
gi|6425313|emb|CAB60356.1| Protein TIAR-2 [Caenorhabditis elegans]
Length = 434
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 65/154 (42%), Gaps = 37/154 (24%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI----CGDPNSVLRFAFVEFTDEEGARAA 234
RT++V+++D +T+E LATLF G V+ +I DP +AFVEF+D A A
Sbjct: 40 RTLFVANLDPAITDEFLATLFNQIGAVMKAKIIFEGLNDP-----YAFVEFSDHNQATLA 94
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L + R L K V F PR E N K T +
Sbjct: 95 LQS-------HNGRELLEKE--MHVTWAFEPREPGE-----------NRSKPETSRHFHV 134
Query: 295 FFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSE 328
F +C E+ +L R AFV+F VSE
Sbjct: 135 FVGDLCSEIDSTKL--------REAFVKFGEVSE 160
>gi|444728816|gb|ELW69258.1| Bcl-2-like protein 2 [Tupaia chinensis]
Length = 367
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 231 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 287
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D+E R +L+L ++ ++V+P +T
Sbjct: 288 DKESVRTSLALDESLFRGRQIKVIPKRT 315
>gi|357162450|ref|XP_003579415.1| PREDICTED: uncharacterized protein LOC100842396 [Brachypodium
distachyon]
Length = 641
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 6/94 (6%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEG 230
+D+ RTV V+++ T+E L+T F+ CG+V+ + D N+ AFV F D+E
Sbjct: 502 EDDADSRTVLVTNVHFAATKEALSTHFMKCGRVLKNIVLTDANTGHPKGAAFVTFADKES 561
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
A+SL+GT FY + + A AP P FL
Sbjct: 562 IGRAISLSGT--SFYSRVLTVVRKAEAP--PGFL 591
>gi|165761289|pdb|3B4D|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761291|pdb|3B4M|A Chain A, Crystal Structure Of Human Pabpn1 Rrm
gi|165761292|pdb|3B4M|B Chain B, Crystal Structure Of Human Pabpn1 Rrm
gi|165761293|pdb|3B4M|C Chain C, Crystal Structure Of Human Pabpn1 Rrm
gi|165761294|pdb|3B4M|D Chain D, Crystal Structure Of Human Pabpn1 Rrm
Length = 96
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 6 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 62
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 63 SLALDESLFRGRQIKVIPKRT 83
>gi|50293737|ref|XP_449280.1| hypothetical protein [Candida glabrata CBS 138]
gi|74690665|sp|Q6FKG4.1|PABP_CANGA RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|49528593|emb|CAG62254.1| unnamed protein product [Candida glabrata]
Length = 579
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 225
T+ Q E + ++YV D+D V+E L +F G V R+C D + L +A+V F
Sbjct: 24 TNEENQSETVSASLYVGDLDPSVSEAHLYDIFSPIGAVSSIRVCRDAITKTSLGYAYVNF 83
Query: 226 TDEEGARAALSLAGTMLGFYPVR 248
D + A+ A+ L F P++
Sbjct: 84 NDHDAAKTAIE----KLNFTPIK 102
>gi|367040559|ref|XP_003650660.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
gi|346997921|gb|AEO64324.1| hypothetical protein THITE_2110364 [Thielavia terrestris NRRL 8126]
Length = 777
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 76/170 (44%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 243
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI+ +VT+ + + F + GEV L D + +R FV F
Sbjct: 244 FTNVYVKNINHEVTEEEFRELF-AKYGEVTSSSLARDNEGKSRGFGFVNF 292
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + ++G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNSTQDGEKALEE 124
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 125 LNYTLIKGRPCRIMWSQ 141
>gi|392558545|gb|EIW51732.1| polyadenylate binding protein [Trametes versicolor FP-101664 SS1]
Length = 631
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/165 (24%), Positives = 69/165 (41%), Gaps = 14/165 (8%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++ D + + +
Sbjct: 78 CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVATDEHGRSKGY 137
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM ++ I
Sbjct: 138 GFVHYETAEAAETAIKAVNGML-------LNDKKVYVGHHISRKERQSKIEEMKNQFTNI 190
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
Y N+D +VTQ + FE + + D S FV F
Sbjct: 191 YVKNVDPEVTQEEFVQLFEPFGRITSAVLQVDDEGKSRGFGFVNF 235
>gi|299743563|ref|XP_001835851.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
gi|298405712|gb|EAU85916.2| RNA-binding protein Prp24 [Coprinopsis cinerea okayama7#130]
Length = 1042
Score = 49.7 bits (117), Expect = 0.002, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 84/187 (44%), Gaps = 47/187 (25%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS--- 236
TV+V+D+ +QVTE++L +LF CG + + +I PN+V+ A VEF + + AAL+
Sbjct: 669 TVFVADLPEQVTEDELKSLFKDCGSIREVKITKLPNAVV--ALVEFFERDSVPAALTKDK 726
Query: 237 --LAGTMLGF---YPVRVLPSK---------------------------TAIAPVNPTFL 264
L G + + + VR PSK + P P +
Sbjct: 727 KRLQGQEISYGMLFDVR-WPSKKFKTTRRFCYVQFTSPDAAQQALELHRKELEPNLPLNV 785
Query: 265 PRSEDER-------EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HST 316
S ER + R +Y + K T+ D++ F + G+V+ +R+ + H+
Sbjct: 786 YISNPERKKERTDHDANEREVYVAGLSKFTTKADLEKLFATY-GKVKDVRMATEQDGHAR 844
Query: 317 RIAFVEF 323
AFVE+
Sbjct: 845 GYAFVEY 851
Score = 45.8 bits (107), Expect = 0.027, Method: Composition-based stats.
Identities = 51/178 (28%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
N Y R RT + + R VYV+ + + T+ L LF T G+V D R+ +
Sbjct: 784 NVYISNPERKKERTDHDANE----REVYVAGLSKFTTKADLEKLFATYGKVKDVRMATEQ 839
Query: 215 NSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVL---PSKTAIAPVNPTFLPRSEDE 270
+ R +AFVE+ + + AR AL L + V P A + T L R+ +
Sbjct: 840 DGHARGYAFVEYEEPQDARRALDANNYELKKRRIAVTLADPRVRARHNKSETGLGRNAEI 899
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSE 328
R SR+I N+ +G ++ FE V V+R+ + D R A VE +E
Sbjct: 900 R---SRSIRVRNLPPNTQEGLLQQTFEKVAA-VRRVEVFAD----KREAAVELETAAE 949
>gi|356564176|ref|XP_003550332.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 654
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 60/127 (47%), Gaps = 13/127 (10%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
++ + ++YV D+DQ V + QL LF GQVV R+C D + L + +V F++ + A
Sbjct: 30 NQFVTTSLYVGDLDQNVNDSQLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNFSNPQDA 89
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
AL + L F P+ + + +P+ R+ + I+ N+DK +
Sbjct: 90 ARALDV----LNFTPLNNRSIRIMYSHRDPSL-------RKSGTANIFIKNLDKAIDHKA 138
Query: 292 IKLFFES 298
+ F S
Sbjct: 139 LHDTFSS 145
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D +++E+L +F G + C++ DP + R + FV F T EE RA +
Sbjct: 319 LYLKNLDDTISDEKLKEMFADYGTITSCKVMRDPTGISRGSGFVAFSTPEEATRALGEMN 378
Query: 239 GTMLGFYPVRV 249
G M P+ V
Sbjct: 379 GKMFAGKPLYV 389
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 37/170 (21%), Positives = 77/170 (45%), Gaps = 24/170 (14%)
Query: 165 NCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
+ R + +D +R++ +++ ++D+ + + L F + G ++ C+I D + + +
Sbjct: 105 SIRIMYSHRDPSLRKSGTANIFIKNLDKAIDHKALHDTFSSFGLILSCKIATDASGLSKG 164
Query: 220 FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT- 277
+ FV+F +EE A+ A+ L G ++ V V FL R +D S+T
Sbjct: 165 YGFVQFDNEEAAQNAIDKLNGMLINDKQVYV-----------GHFL-RKQDRENALSKTK 212
Query: 278 ---IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N+ + T ++ + F G + ++ D +R FV F
Sbjct: 213 FNNVYVKNLSESTTDEELMINFGE-YGTITSALIMRDADGKSRCFGFVNF 261
>gi|255637596|gb|ACU19123.1| unknown [Glycine max]
Length = 205
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N S A ++E R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 73 NSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 132
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 133 EFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 174
>gi|398327|emb|CAA81127.1| poly(A)-mRNA binding protein [Anemia phyllitidis]
Length = 638
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 17/148 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+D V+E +L +F GQVV R+C D L +A+V + + A AL L
Sbjct: 27 SLYVGDLDPDVSESELYEVFNQIGQVVSIRVCRDLMTKKSLGYAYVNYGTHQDASQALEL 86
Query: 238 AG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
T++ P+R++ S R R+ + I+ N++K + + F
Sbjct: 87 LNFTLVKGKPIRIMYSH------------RDPSIRKSGAANIFIKNLEKSIDNKALHDTF 134
Query: 297 ESVCGEVQRLR-LLGDYQHSTRIAFVEF 323
S G + R ++ D +S FV+F
Sbjct: 135 -SAFGTILSCRVVMDDAGNSKGYGFVQF 161
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFT-DEEGARAALSLA 238
+Y+ +ID + +E+L LF G V C++ P + FV F+ EE +A +
Sbjct: 309 LYLKNIDDSIDDEKLRELFAVFGTVTSCKVMKSPQGQSMGSGFVTFSAPEEAMQAVNDMN 368
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 369 GKMVGSKPLYV 379
>gi|356512681|ref|XP_003525045.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 215
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N S A ++E R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 73 NSAASQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 132
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 133 EFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 174
>gi|324512478|gb|ADY45169.1| Splicing factor 3B subunit 4 [Ascaris suum]
Length = 399
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 71/155 (45%), Gaps = 28/155 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T+YV +D++VT+ L LF+ G VV + D NS F FVEF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQSGPVVSVNMPKDRVTNSHQGFGFVEFMGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P++V + S E+ M I+ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANIFVGNLDPEV---DEKL 115
Query: 295 FFES-----VCGEVQRLRLLGDYQHSTRIAFVEFA 324
F++ V +V ++ + +S AFV FA
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFA 150
>gi|383864354|ref|XP_003707644.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Megachile
rotundata]
Length = 507
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 118 TLPRARPPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEDFFSSVGKVQDV 177
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 178 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 237
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 238 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 280
>gi|408395605|gb|EKJ74783.1| hypothetical protein FPSE_05031 [Fusarium pseudograminearum CS3096]
Length = 749
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETGASKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI VT+ D + FE G+V L D + +R FV F
Sbjct: 239 FTNVYVKNIAADVTEDDFRQLFEKY-GDVTSSSLARDQEGKSRGFGFVNF 287
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALEE 119
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 120 LNYTIIKGRPCRIMWSQ 136
>gi|452840300|gb|EME42238.1| hypothetical protein DOTSEDRAFT_73158 [Dothistroma septosporum
NZE10]
Length = 379
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTD-EEGARAALSL 237
+ V ++ +VT++ L F G V R+ D + F FVEFTD E+G +AA +
Sbjct: 245 IMVGNLAGEVTDDSLTKAFANYG-VNKARVIRDKRTTKSKGFGFVEFTDGEQGFKAAREM 303
Query: 238 AGTMLGFYPVRVLPSKTAIAPV 259
+G +G +PV + ++T +AP+
Sbjct: 304 SGKYIGSHPVTIQRARTNVAPI 325
>gi|449445890|ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 654
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 17/151 (11%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTD-EEGARA 233
+ ++YV D+D VT+ QL +F GQVV R+C D + L + +V +++ ++ ARA
Sbjct: 27 VTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSNPQDAARA 86
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L T L P+RV+ S R R+ + I+ N+DK + +
Sbjct: 87 LDVLNFTPLNGKPIRVMYSH------------RDPSIRKSGAGNIFIKNLDKAIDHKALH 134
Query: 294 LFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F S G + ++ D S FV+F
Sbjct: 135 DTF-SAFGSILSCKVALDSSGQSKGYGFVQF 164
Score = 45.8 bits (107), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 27/109 (24%), Positives = 50/109 (45%), Gaps = 24/109 (22%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DPN + R + FV F T +E +RA + +
Sbjct: 313 LYIKNLDDSIGDDKLKELFAPFGTITSCKVMRDPNGISRGSGFVAFSTPDEASRALVEMN 372
Query: 239 GTMLGFYP----------------------VRVLPSKTAIAPVNPTFLP 265
G M+ P +R +P ++AP P + P
Sbjct: 373 GKMVVSKPLYVALAQRKEDRRARLQAQFSQIRSVPMPASVAPRMPIYPP 421
>gi|225677677|gb|EEH15961.1| RNA-binding protein rsd1 [Paracoccidioides brasiliensis Pb03]
Length = 600
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 160 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 212
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 184 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 243
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 270
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 244 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 299
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F
Sbjct: 300 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQF 352
>gi|145352361|ref|XP_001420518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580752|gb|ABO98811.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 223
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 49/94 (52%), Gaps = 10/94 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
E +RRT +VS+ +T EQ+ LF CG + +CR G P F F+EF + A AA
Sbjct: 94 EELRRTAHVSNYPVGLTTEQVKQLFSFCGSIAECRE-GGPGK--NFCFIEFESNKEALAA 150
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFL-PRS 267
+L G +G +RV +KT P L PRS
Sbjct: 151 CALNGMQVGGRNLRVELAKT------PKLLNPRS 178
>gi|294877113|ref|XP_002767904.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
gi|239869872|gb|EER00622.1| protein HSH49, putative [Perkinsus marinus ATCC 50983]
Length = 289
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 23/168 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR + +D +RR+ VYV ++D+ + + L F G ++ C++ P+ R F
Sbjct: 120 CRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGF 179
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--- 276
FV F +E A AA++ L G +G V V K ++ D + +
Sbjct: 180 GFVHFESDESAEAAIAKLNGMQIGEKTVYVAQFK------------KTADRSDGSPKNFT 227
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+Y +I T+ I+ F GE+ + D R AFV FA
Sbjct: 228 NVYIKHIPPSWTEEKIREEF-GAFGEITSFAMQTD-PKGRRFAFVNFA 273
>gi|270010566|gb|EFA07014.1| hypothetical protein TcasGA2_TC009984 [Tribolium castaneum]
Length = 225
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG + I G P FA++EF D +
Sbjct: 94 EVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYIEFGDRD 150
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ A+++ ++ P++V+P +T
Sbjct: 151 SVQTAMAMDESLFRGRPIKVMPKRT 175
>gi|356525457|ref|XP_003531341.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
Length = 220
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 2/103 (1%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N S A ++E R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 79 NAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 138
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
EF + E + AL L + L ++VLP +T + P + PR
Sbjct: 139 EFVEAEAVQEALLLNESELHGRQLKVLPKRTNV-PGMKQYRPR 180
>gi|297297505|ref|XP_001107287.2| PREDICTED: polyadenylate-binding protein 2-like isoform 2 [Macaca
mulatta]
Length = 355
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 231 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 287
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 288 SLALDESLFRGRQIKVIPKRT 308
>gi|357612395|gb|EHJ67964.1| putative RNA-binding region-containing protein [Danaus plexippus]
Length = 536
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 72/165 (43%), Gaps = 10/165 (6%)
Query: 152 RKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI- 210
R+R+ Y R + + + +E RTV+ + Q++ + L F + G+V D R+
Sbjct: 155 RERSEYRSKSRGIEPKLDDLPPEERDLRTVFCMQLSQRIRAKDLEEFFSSVGKVRDVRLI 214
Query: 211 -CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPR 266
C A++EF D E AL L G L P+ V + K + P P+
Sbjct: 215 TCNKTRRFKGIAYIEFKDAESVPLALGLTGQKLLGVPIIVQHTQAEKNRVGNTLPNLAPK 274
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+ + +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 275 TSN----GPTRLYVGSLHFNITEDMLRGIFEPF-GKIDHIQLMTD 314
>gi|189239479|ref|XP_975440.2| PREDICTED: similar to polyadenylate binding protein 2 [Tribolium
castaneum]
Length = 222
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG + I G P FA++EF D +
Sbjct: 94 EVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNKYDGHPKG---FAYIEFGDRD 150
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ A+++ ++ P++V+P +T
Sbjct: 151 SVQTAMAMDESLFRGRPIKVMPKRT 175
>gi|449494063|ref|XP_004159436.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN--SVLRFAFVEFTDEEGARAALSL 237
++YV D+DQ V E QL LF QVV R+C D L +A+V F+ + A A+
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME- 94
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F PV P + I+ +P+ R+ ++ N+D +
Sbjct: 95 ---HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSI 134
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
VYV ++ + T++ L LF G + + D N + F FV F + + A AA+ L
Sbjct: 215 VYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLD 274
Query: 239 GTMLG----FYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQ 289
GT+LG Y R A + F E ER ++ +Y N+D +
Sbjct: 275 GTVLGDDKTLYVGRAQRKAEREAELRAKF----EQERKSRFEKLQGANLYIKNLDDHIDD 330
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMVSE 328
+K F S G + +++ D QH S FV F+ E
Sbjct: 331 EKLKELF-SEYGTITSCKVMLD-QHGLSKGSGFVAFSSPDE 369
>gi|295664082|ref|XP_002792593.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226278707|gb|EEH34273.1| RNA-binding protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 596
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 160 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 212
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 180 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 239
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 270
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 240 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 295
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F
Sbjct: 296 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQF 348
>gi|313235350|emb|CBY19695.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++ T E+L F CG + + C + G P FA++EFT++E A
Sbjct: 90 RSIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKG---FAYIEFTEKESVDA 146
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L G++L ++V+P +T
Sbjct: 147 SLALDGSILCGRQIKVMPKRT 167
>gi|340522099|gb|EGR52332.1| predicted protein [Trichoderma reesei QM6a]
Length = 569
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 71/162 (43%), Gaps = 20/162 (12%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ +L F G Q+V RI G V +VEF
Sbjct: 177 EDERDRRTVFVQQLAARLRTRELKEFFEKVGAVNEAQIVKDRISGRSKGV---GYVEFKS 233
Query: 228 EEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN 282
E+ AL L G L PV V ++ A P + P S + +Y N
Sbjct: 234 EDSVPLALQLTGQKLLGIPVIVQHTEAEKNRQARNPDSSNAHPNS-----VPFHRLYVGN 288
Query: 283 IDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 289 IHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQF 329
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N +SNA + V +YV +I VTE+ L +F G++ ++ D N R + FV
Sbjct: 268 NPDSSNAHPNSVPFHRLYVGNIHFNVTEQDLQAVFEPFGELEFVQLQKDDNGRSRGYGFV 327
Query: 224 EFTDEEGARAAL-SLAGTMLGFYPVRV 249
+F D AR AL + G L P+RV
Sbjct: 328 QFRDAGQAREALEKMNGFDLAGRPIRV 354
>gi|328781105|ref|XP_624668.3| PREDICTED: RNA-binding protein 39-like [Apis mellifera]
Length = 506
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 117 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 176
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 177 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 236
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 237 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 279
>gi|449446375|ref|XP_004140947.1| PREDICTED: polyadenylate-binding protein 3-like [Cucumis sativus]
Length = 652
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN--SVLRFAFVEFTDEEGARAALSL 237
++YV D+DQ V E QL LF QVV R+C D L +A+V F+ + A A+
Sbjct: 36 SLYVGDLDQSVNEGQLLELFGQVAQVVSIRVCRDQTRRQSLGYAYVNFSSHQDAVNAME- 94
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F PV P + I+ +P+ R+ ++ N+D +
Sbjct: 95 ---HLNFTPVNGKPIRIMISNRDPSI-------RKSGYANVFIKNLDLSI 134
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 68/161 (42%), Gaps = 19/161 (11%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
VYV ++ + T++ L LF G + + D N + F FV F + + A AA+ L
Sbjct: 215 VYVKNLPETTTDDDLKNLFAPHGTITSAIVMTDSNGKSKCFGFVNFQNTDSAAAAVEKLD 274
Query: 239 GTMLG----FYPVRVLPSKTAIAPVNPTFLPRSEDER-----EMCSRTIYCTNIDKKVTQ 289
GT+LG Y R A + F E ER ++ +Y N+D +
Sbjct: 275 GTVLGDDKTLYVGRAQRKAEREAELKAKF----EQERKSRFEKLQGANLYIKNLDDHIDD 330
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQH--STRIAFVEFAMVSE 328
+K F S G + +++ D QH S FV F+ E
Sbjct: 331 EKLKELF-SEYGTITSCKVMLD-QHGLSKGSGFVAFSSPDE 369
>gi|405122394|gb|AFR97161.1| polyadenylate-binding protein [Cryptococcus neoformans var. grubii
H99]
Length = 670
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 NCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
+CR +Q+D +R+T +++ ++DQ + + L F G ++ C++ D N R
Sbjct: 118 SCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRG 177
Query: 220 FAFVEFTDEEGARAALSLAGTML 242
FAFV ++ E A AA+ ML
Sbjct: 178 FAFVHYSTGEAADAAIKAVNGML 200
>gi|313247139|emb|CBY35961.1| unnamed protein product [Oikopleura dioica]
Length = 208
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++ T E+L F CG + + C + G P FA++EFT++E A
Sbjct: 90 RSIYVGQVEYATTAEELEQHFHGCGALNRVTIICDKFSGHPKG---FAYIEFTEKESVDA 146
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L G++L ++V+P +T
Sbjct: 147 SLALDGSILCGRQIKVMPKRT 167
>gi|226295167|gb|EEH50587.1| RNA splicing factor Pad-1 [Paracoccidioides brasiliensis Pb18]
Length = 600
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 78/174 (44%), Gaps = 15/174 (8%)
Query: 160 GKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICG 212
G R RT Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 184 GGRGRRSRTPEPQLTEDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSG 243
Query: 213 DPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDE 270
V +VEF DEE A+ L G L P+ ++ ++ NP S ++
Sbjct: 244 RSKGV---GYVEFKDEESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANVSGNQ 299
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ +Y NI +T+ D++ FE GE+ ++L + +R FV+F
Sbjct: 300 NSIPFHRLYVGNIHFSITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQF 352
>gi|429329983|gb|AFZ81742.1| RNA recognition motif domain-containing protein [Babesia equi]
Length = 1110
Score = 49.3 bits (116), Expect = 0.003, Method: Composition-based stats.
Identities = 34/109 (31%), Positives = 55/109 (50%), Gaps = 2/109 (1%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGD 213
N S+ R++ + + RTVY++++ + TE++L++ F +CG V +IC D
Sbjct: 971 NKTSERVRKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLD 1030
Query: 214 PNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP 261
R + FVEF DE A AL L+ +L + V S AI +P
Sbjct: 1031 RMGKSRGYGFVEFCDERTAMDALLLSTLVLDDREILVSRSNRAIYKDSP 1079
Score = 43.9 bits (102), Expect = 0.11, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 58/131 (44%), Gaps = 16/131 (12%)
Query: 208 CRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLP 265
C+ N + + +VEF E+ AR + +G +P+ + K + P P
Sbjct: 914 CKPIEKRNFSVGYCYVEFDREDAAREVIQKLINEIG-WPLDCELEDVKFQVTPSIPMINK 972
Query: 266 RSEDEREM------------CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
SE R++ SRT+Y TN+ K T+ ++ FF CG V+ +++ D
Sbjct: 973 TSERVRKIEKKMPTTLSKDKTSRTVYITNLSYKTTEDELSSFFTKSCGPVKAVQICLDRM 1032
Query: 314 HSTR-IAFVEF 323
+R FVEF
Sbjct: 1033 GKSRGYGFVEF 1043
>gi|380012525|ref|XP_003690330.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 39-like [Apis
florea]
Length = 506
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 117 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 176
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 177 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 236
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 237 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 279
>gi|46128087|ref|XP_388597.1| hypothetical protein FG08421.1 [Gibberella zeae PH-1]
Length = 784
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDETGASKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI VT+ D + FE G+V L D + +R FV F
Sbjct: 239 FTNVYVKNIAADVTEDDFRQLFEKY-GDVTSSSLARDQEGKSRGFGFVNF 287
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATPDGEKALEE 119
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 120 LNYTIIKGRPCRIMWSQ 136
>gi|195338839|ref|XP_002036031.1| GM16278 [Drosophila sechellia]
gi|194129911|gb|EDW51954.1| GM16278 [Drosophila sechellia]
Length = 596
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
T + R+R+ + +R S ++D RTV+ + Q+V L F + G+V D
Sbjct: 211 TNSPRRRSPANGAERTTPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRD 267
Query: 208 CRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPT 262
R+ C A++EF D E AL L+G L P+ V + K + P
Sbjct: 268 VRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPA 327
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
F P+S +Y ++ +T+ ++ FE G++ ++L+ D +
Sbjct: 328 FQPKS----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMDTE 373
>gi|224063493|ref|XP_002301171.1| predicted protein [Populus trichocarpa]
gi|222842897|gb|EEE80444.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ DP+ + R + FV F T EE +RA L
Sbjct: 314 LYIKNLDDSVNDEKLKELFSDFGTITSCKVMHDPSGISRGSGFVAFSTPEEASRALAELN 373
Query: 239 GTMLGFYPVRVLPSK 253
G M+ P+ V P++
Sbjct: 374 GKMVVSKPLYVAPAQ 388
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+ + ++YV D+D VT+ QL LF GQVV R+C D ++ L + +V +++ + A
Sbjct: 27 QFVPTSLYVGDLDFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 86
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL + L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 87 RALDV----LNFTPLNNKPLRIMYSHRDPSI-------RKSGMANIFIKNLDKTIDHKAL 135
Query: 293 KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F S G + ++ D S FV+F
Sbjct: 136 HDTFSSF-GNILSCKVATDASGQSKGYGFVQF 166
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 32/141 (22%), Positives = 64/141 (45%), Gaps = 20/141 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F + G ++ C++ D + + +
Sbjct: 102 LRIMYSHRDPSIRKSGMANIFIKNLDKTIDHKALHDTFSSFGNILSCKVATDASGQSKGY 161
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F EE A+ A+ L G ++ V V FL + E + + +
Sbjct: 162 GFVQFDSEEAAQNAIDKLNGMLINDKQVYV-----------GNFLRKQERDSALSNIKFN 210
Query: 277 TIYCTNIDKKVTQGDIKLFFE 297
IY N+ + T D+K FE
Sbjct: 211 NIYVKNLAESTTDEDLKSIFE 231
>gi|147907300|ref|NP_001080719.1| polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82241535|sp|Q7ZXB8.1|PAB2B_XENLA RecName: Full=Polyadenylate-binding protein 2-B; Short=PABP-2-B;
Short=Poly(A)-binding protein 2-B; AltName: Full=Nuclear
poly(A)-binding protein 1-B; AltName:
Full=Poly(A)-binding protein II-B; Short=PABII-B;
AltName: Full=Polyadenylate-binding nuclear protein 1-B;
AltName: Full=XLnPABP2-B; AltName: Full=nPABP2-B;
AltName: Full=xPABPII-B
gi|27924235|gb|AAH45063.1| Pabpn1-prov protein [Xenopus laevis]
Length = 295
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 162 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYIEFSDKESVRT 218
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 219 SLALDESLFRGRQIKVVPKRT 239
>gi|321261800|ref|XP_003195619.1| polyadenylate-binding protein [Cryptococcus gattii WM276]
gi|317462093|gb|ADV23832.1| polyadenylate-binding protein, putative [Cryptococcus gattii WM276]
Length = 675
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 NCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
+CR +Q+D +R+T +++ ++DQ + + L F G ++ C++ D N R
Sbjct: 118 SCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRG 177
Query: 220 FAFVEFTDEEGARAALSLAGTML 242
FAFV ++ E A AA+ ML
Sbjct: 178 FAFVHYSTGEAADAAIKAVNGML 200
>gi|303286577|ref|XP_003062578.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456095|gb|EEH53397.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 235
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 10/92 (10%)
Query: 169 SNAQQDEVIRRTVYVSDI----DQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVE 224
S A E I RTV+V I + ++TE +A F G VV R+ R A+VE
Sbjct: 2 SRASDQEKISRTVHVGGIRGLDNGEITERDVAEFFSQQGPVVAVRVHA------RSAWVE 55
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
F D+ AAL+L G G + +RV SKTAI
Sbjct: 56 FADDASTMAALNLDGVTTGGHNLRVNRSKTAI 87
>gi|169622264|ref|XP_001804541.1| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
gi|187608896|sp|Q0U1G2.3|PABP_PHANO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|160704734|gb|EAT78222.2| hypothetical protein SNOG_14351 [Phaeosphaeria nodorum SN15]
Length = 744
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 3/89 (3%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF 225
T+ AQQ ++YV ++D VTE L LF + GQV R+C D L +A+V +
Sbjct: 37 TTAAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNY 96
Query: 226 -TDEEGARAALSLAGTMLGFYPVRVLPSK 253
+ E+G +A L T++ P R++ S+
Sbjct: 97 NSSEDGEKALEELNYTVIKGKPCRIMWSQ 125
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGY 178
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ + G +L V V +P K ++ +E +
Sbjct: 179 GFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKF---------EEMKANFT 229
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
IY NID VT D + FE G++ + D Q +R FV +
Sbjct: 230 NIYVKNIDLDVTDEDFRELFEK-HGDITSASIARDDQGKSRGFGFVNY 276
>gi|340718898|ref|XP_003397899.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus
terrestris]
Length = 520
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 131 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 190
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 191 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 250
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 251 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 293
>gi|118486179|gb|ABK94932.1| unknown [Populus trichocarpa]
Length = 408
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +E++ LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 74 LYIKNLDDSIGDEKIKELFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASRALLEMN 133
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 134 GKMVASKPLYV 144
>gi|124507026|ref|XP_001352110.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
gi|23505139|emb|CAD51921.1| RNA binding protein, putative [Plasmodium falciparum 3D7]
Length = 202
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAF 222
N + +Q+E+ R+++V ++D E+L +LF CG + I + N+ +A+
Sbjct: 57 NVDSHEQEQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAY 116
Query: 223 VEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN-PTFLP 265
+EF D R ALSL+ + ++V + I N P P
Sbjct: 117 IEFADASSVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISP 160
>gi|405953553|gb|EKC21194.1| Squamous cell carcinoma antigen recognized by T-cells 3
[Crassostrea gigas]
Length = 970
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 2/84 (2%)
Query: 168 TSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 225
A+QD + RRT +VS++D + E+++ +F CG++ D R+ + +A+VEF
Sbjct: 760 VEKAEQDPDKSRRTSFVSNLDYSIDEDRIGQIFAKCGEMTDIRLVKTIKGKSKGYAYVEF 819
Query: 226 TDEEGARAALSLAGTMLGFYPVRV 249
DE G AL L T + P+ V
Sbjct: 820 KDELGVLEALKLDRTPIEGRPMFV 843
>gi|350410161|ref|XP_003488967.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus impatiens]
Length = 508
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 119 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 178
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 179 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 238
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 239 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 281
>gi|340718900|ref|XP_003397900.1| PREDICTED: RNA-binding protein 39-like isoform 2 [Bombus
terrestris]
Length = 508
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 119 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 178
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 179 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 238
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 239 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 281
>gi|58271356|ref|XP_572834.1| polyadenylate-binding protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|134114714|ref|XP_774065.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819167|sp|P0CP47.1|PABP_CRYNB RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|338819168|sp|P0CP46.1|PABP_CRYNJ RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|50256695|gb|EAL19418.1| hypothetical protein CNBH1100 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229093|gb|AAW45527.1| polyadenylate-binding protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 673
Score = 49.3 bits (116), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 NCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
+CR +Q+D +R+T +++ ++DQ + + L F G ++ C++ D N R
Sbjct: 116 SCRIMWSQRDPALRKTGQGNIFIKNLDQSIDNKALHDTFAAFGDILSCKVGTDENGKSRG 175
Query: 220 FAFVEFTDEEGARAALSLAGTML 242
FAFV ++ E A AA+ ML
Sbjct: 176 FAFVHYSTGEAADAAIKAVNGML 198
>gi|15220233|ref|NP_175180.1| RNA-binding protein 47C [Arabidopsis thaliana]
gi|75337807|sp|Q9SX79.1|RB47C_ARATH RecName: Full=Polyadenylate-binding protein RBP47C;
Short=Poly(A)-binding protein RBP47C; AltName:
Full=RNA-binding protein 47C; Short=AtRBP47C
gi|5668812|gb|AAD46038.1|AC007519_23 Contains 3 PF|00076 RNA recognition motif domains. ESTs gb|R30092,
gb|R30093, gb|AA394338, gb|N65719 and gb|AA597577 come
from this gene [Arabidopsis thaliana]
gi|12744993|gb|AAK06876.1|AF344325_1 putative DNA binding protein [Arabidopsis thaliana]
gi|14334552|gb|AAK59684.1| putative DNA binding protein [Arabidopsis thaliana]
gi|17065624|gb|AAL33806.1| putative DNA binding protein [Arabidopsis thaliana]
gi|332194053|gb|AEE32174.1| RNA-binding protein 47C [Arabidopsis thaliana]
Length = 432
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 50/106 (47%), Gaps = 15/106 (14%)
Query: 150 TRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
T RK NGY Q M T + +++ T++V +D VT+E L F G++V +
Sbjct: 275 TPRKTNGYQQQGGYMPNGTLTRPEGDIMNTTIFVGGLDSSVTDEDLKQPFNEFGEIVSVK 334
Query: 210 I-----CGDPNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRV 249
I CG FV+F + A AL L GT++G VR+
Sbjct: 335 IPVGKGCG---------FVQFVNRPNAEEALEKLNGTVIGKQTVRL 371
>gi|350410158|ref|XP_003488966.1| PREDICTED: RNA-binding protein 39-like isoform 1 [Bombus impatiens]
Length = 532
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 10/168 (5%)
Query: 149 TTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC 208
T R R + +G + R +E RTV+ + Q++ L F + G+V D
Sbjct: 143 TLPRARLPFGKGVSPLGIRNDELTPEERDARTVFCMQLSQRIRARDLEEFFSSVGKVQDV 202
Query: 209 RI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTF 263
R+ C A+VEF D E AL L+G L P+ V + K + P
Sbjct: 203 RLITCNKTRRFKGIAYVEFKDPESVTLALGLSGQKLLGVPIVVQHTQAEKNRMGNSMPNL 262
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+P+ + +Y ++ +T+ ++ FE G++ ++L+ D
Sbjct: 263 MPKGQT----GPMRLYVGSLHFNITEDMLRGIFEPF-GKIDNIQLIMD 305
>gi|403417917|emb|CCM04617.1| predicted protein [Fibroporia radiculosa]
Length = 671
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 73/179 (40%), Gaps = 15/179 (8%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
YS K R CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++
Sbjct: 107 YSSIKGRA-CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 213 DPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
D + + + FV + E A A+ ML L K + + R
Sbjct: 166 DEHGRSKGYGFVHYETAEAAETAIKAVNGML-------LNDKKVYVGYHISRKERQSKLE 218
Query: 272 EMCSR--TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSE 328
EM ++ IY N D +VT+ + F+ + D S FV F + E
Sbjct: 219 EMKAQFTNIYVKNFDPEVTEEEFMALFQQFGSVTSAVIQRDDEGRSRGFGFVNFEVHDE 277
>gi|367008356|ref|XP_003678678.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
gi|359746335|emb|CCE89467.1| hypothetical protein TDEL_0A01350 [Torulaspora delbrueckii]
Length = 588
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 15/156 (9%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDE 228
+Q+ E ++YV ++D V+E L +F G V R+C D + L +A+V F D
Sbjct: 34 SQKVETSSASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDH 93
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
E + A+ L + P++ +P + + +P+ R+ S I+ N+ +
Sbjct: 94 EAGKTAIE----KLNYAPIKGVPCRIMWSQRDPSM-------RKKGSGNIFIKNLHPDID 142
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ F SV G + ++ D ++R FV F
Sbjct: 143 NKALHDTF-SVFGNILSCKIATDEAGNSRGFGFVHF 177
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 39/82 (47%), Gaps = 5/82 (6%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+ +++ ++ + + L F G ++ C+I D R F
Sbjct: 113 CRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKALHDTFSVFGNILSCKIATDEAGNSRGF 172
Query: 221 AFVEFTDEEGARAALSLAGTML 242
FV F D+E A+ A+ ML
Sbjct: 173 GFVHFEDDEAAKEAIDAINGML 194
>gi|313240198|emb|CBY32547.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV +D++VTE LA LF+ G VV+C + D + + FVEF E+ A A+ +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKI 71
Query: 238 AGTMLGF-YPVRV 249
+ F PVRV
Sbjct: 72 LNMIKLFGKPVRV 84
>gi|313237737|emb|CBY12875.1| unnamed protein product [Oikopleura dioica]
Length = 307
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV +D++VTE LA LF+ G VV+C + D + + FVEF E+ A A+ +
Sbjct: 12 TVYVGGLDEKVTEHLLAELFIQVGPVVNCHMPKDRVTQTHQGYGFVEFLSEDDADYAIKI 71
Query: 238 AGTMLGF-YPVRV 249
+ F PVRV
Sbjct: 72 LNMIKLFGKPVRV 84
>gi|444321552|ref|XP_004181432.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
gi|387514476|emb|CCH61913.1| hypothetical protein TBLA_0F03780 [Tetrapisispora blattae CBS 6284]
Length = 577
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 41/165 (24%), Positives = 73/165 (44%), Gaps = 14/165 (8%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+ +++ ++ + + L F G ++ C+I D + F
Sbjct: 114 CRIMWSQRDPSMRKKGSGNIFIKNLHPDIDNKTLYETFSVFGNILSCKIANDETGKSKGF 173
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
FV F +EE AR A+ ++ G +L V V P V+ DE +Y
Sbjct: 174 GFVHFENEEAAREAIDAINGMLLNGQEVYVAPH------VSKKDRQSKLDEARANFTNVY 227
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
N+D + T+ D + F+ G + + L D + +R FV+F
Sbjct: 228 VKNLDLEATEEDFENLFKPY-GTITSVALEKDAEGKSRGFGFVDF 271
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 67/155 (43%), Gaps = 21/155 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGAR 232
E + ++YV ++D V+E L +F G V R+C D + L +A+V F D E +
Sbjct: 39 ENVTASLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFNDHEAGK 98
Query: 233 AAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ L T + P R++ S+ R R+ S I+ N+ + D
Sbjct: 99 TAIEKLNYTAIKGRPCRIMWSQ------------RDPSMRKKGSGNIFIKNLHPDI---D 143
Query: 292 IKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
K +E SV G + ++ D ++ FV F
Sbjct: 144 NKTLYETFSVFGNILSCKIANDETGKSKGFGFVHF 178
>gi|449497695|ref|XP_004160482.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 162 RRMNCR--TSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
RRM + T+ + D E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 211 RRMKEKKGTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 270
Query: 219 R--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP-TFLPRSEDEREMCS 275
+VEF D A++L+G +L PV V PS+ V T
Sbjct: 271 SKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVD 330
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMV 326
R +Y N+ +T+ ++ FE+ G V+ ++L D + H FV+FA +
Sbjct: 331 RKLYVGNLHFNMTETHLREIFEAF-GPVELVQLPLDLESGHCKGFGFVQFAHL 382
>gi|170055898|ref|XP_001863788.1| RNA-binding protein [Culex quinquefasciatus]
gi|167875756|gb|EDS39139.1| RNA-binding protein [Culex quinquefasciatus]
Length = 263
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 56/121 (46%), Gaps = 10/121 (8%)
Query: 123 FGPNGFGY--TNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT 180
FGP G Y TN + + + R NGY+ +R+ + Q D++
Sbjct: 94 FGPGGNNYSGTNLIVNYIPQDMSEQAAQRAIRCLNGYTVRNKRLKVSYARPQSDDIKETN 153
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGARAAL 235
+Y++++ + +T+EQL +F G +V ++ G P V AFV F E A+ A+
Sbjct: 154 LYITNLPRTITDEQLDIIFGKYGTIVQKNILRDKLTGHPRGV---AFVRFNKREEAQEAI 210
Query: 236 S 236
S
Sbjct: 211 S 211
>gi|321471820|gb|EFX82792.1| hypothetical protein DAPPUDRAFT_302363 [Daphnia pulex]
Length = 841
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 75/146 (51%), Gaps = 7/146 (4%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
TV++S++ + +E+ + + + G + D R+ D + F FVEF+ ++ ARA L
Sbjct: 603 TVFLSNLAYETSEQDVRNMMSSSGTITDIRLVLDYKQRCKGFCFVEFSSQDEARAVLKRD 662
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
++ PV + PS+ A +P F +S E+ + ++ + T+ D++ F+
Sbjct: 663 RELMKGRPVFMSPSEPDAALKHPAFKYQSTLEK----KKLFIKGLALSTTKEDLEALFKK 718
Query: 299 VCGEVQRLRLLGDYQHSTR-IAFVEF 323
G ++ +RL+ S + +A+VEF
Sbjct: 719 F-GILKDVRLVTFRNGSPKGLAYVEF 743
>gi|255569500|ref|XP_002525717.1| conserved hypothetical protein [Ricinus communis]
gi|223535017|gb|EEF36700.1| conserved hypothetical protein [Ricinus communis]
Length = 1034
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/200 (25%), Positives = 85/200 (42%), Gaps = 35/200 (17%)
Query: 140 GTANTNGHTTTRRKRNGYSQGKRR----MNCRTSNAQQDEVIRRT------VYVSDIDQQ 189
G N+ G NGY QG + N R + + + E + R +++ +
Sbjct: 450 GDTNSEGVIQVLDSSNGYDQGGKEDNEMNNGRIALSGELEALERRRRRRTEIFIGGLSTD 509
Query: 190 VTEEQLATLFLTCGQVVDCRICGDPNSVL--RFAFVEFTDEEGARAALSLAGTMLGFYPV 247
EE + +F G++V+ R+ + + RFAF+ ++ A+ AL + V
Sbjct: 510 AREEDIRKVFGAVGEIVELRLVTNSKTGKNKRFAFLRYSSAADAKKALE------KYAKV 563
Query: 248 RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD-IKLFFESVCGEVQRL 306
+ + A+APV + TI+ NIDKK T GD IKL E ++ ++
Sbjct: 564 EICGKQCAVAPVE-------------GNDTIFLGNIDKKWTNGDVIKLLQEIGIEKIDKV 610
Query: 307 RLLGDYQHSTR---IAFVEF 323
++ D + R AFVE
Sbjct: 611 IVMTDPSNVGRNRGFAFVEL 630
>gi|345321135|ref|XP_003430388.1| PREDICTED: polyadenylate-binding protein 2-like isoform 2
[Ornithorhynchus anatinus]
Length = 338
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 204 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVRT 260
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+++L ++ ++V+P +T
Sbjct: 261 SMALDESLFRGRQIKVIPKRT 281
>gi|336259709|ref|XP_003344654.1| hypothetical protein SMAC_07222 [Sordaria macrospora k-hell]
Length = 631
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 62/141 (43%), Gaps = 3/141 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D N +VEF EE
Sbjct: 179 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVAEAQIVKDRVSNRSKGVGYVEFKSEEH 238
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+AAL L G L PV V ++ T + +Y NI +T+
Sbjct: 239 VQAALQLTGQKLLGIPVIVQLTEAEKNRQVRTTESTGHHPNSIPFHRLYVGNIHFSITEQ 298
Query: 291 DIKLFFESVCGEVQRLRLLGD 311
D++ FE GE++ ++L D
Sbjct: 299 DLQNVFEPF-GELEFVQLQKD 318
>gi|209877643|ref|XP_002140263.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555869|gb|EEA05914.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 302
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/131 (29%), Positives = 59/131 (45%), Gaps = 18/131 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTC-GQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
++++ +I TEE + F +++ P + RF V+F G A+ L
Sbjct: 11 SIFIKNISPLATEESVCKAFEDLKNEILGVSFHVYPGTSQRFCQVDFKTSSGVTNAMGLN 70
Query: 239 GTMLGFYPVRVLPSKTAIAPV-------NPTFLPRSEDER------EMCSRTIYCTNIDK 285
G+ L P+ + T IAPV P P+S +R E SRTI NI +
Sbjct: 71 GSTLLGVPMSI----TVIAPVPIKLNMKYPKISPKSTTQRSANILEERLSRTILVENIPE 126
Query: 286 KVTQGDIKLFF 296
K TQ ++K+FF
Sbjct: 127 KFTQNELKIFF 137
>gi|386780450|dbj|BAM15222.1| poly(A)-binding protein [Nicotiana tabacum]
Length = 657
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D++ VT+ QL LF GQVV R+C D ++ L + +V +++ A A+
Sbjct: 39 SLYVGDLEFNVTDSQLYDLFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPNDASRAME- 97
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
ML F PV + + +PT R+ S I+ N+DK +
Sbjct: 98 ---MLNFTPVNGKSIRVMYSHRDPTL-------RKSGSANIFIKNLDKSI 137
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +E+L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 322 LYVKNLDDTIDDEKLKELFSEFGTITSCKVMRDPSGISRGSGFVAFSTSEEASRALSEMN 381
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 382 GKMIVSKPLYV 392
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/83 (22%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 165 NCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
+ R + +D +R++ +++ ++D+ + + L F + G ++ C+I D N +
Sbjct: 108 SIRVMYSHRDPTLRKSGSANIFIKNLDKSIDNKALHDTFSSFGNILSCKIATDSNGQSKG 167
Query: 220 FAFVEFTDEEGARAALSLAGTML 242
+ FV++ +EE A+ A+ ML
Sbjct: 168 YGFVQYDNEESAQGAIDKLNGML 190
>gi|428174818|gb|EKX43711.1| hypothetical protein GUITHDRAFT_163728 [Guillardia theta CCMP2712]
Length = 501
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 73/152 (48%), Gaps = 5/152 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RT++V+ + ++ E L F G+VVD RI D + A+VEF +E AA+
Sbjct: 154 RTIFVAQVARKADERDLFQFFSEAGKVVDVRIIKDTQTRRSKGIAYVEFEKQEQCVAAVQ 213
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+G +L +PV V+ + A + E ++ ++ + N+ + + D++ F
Sbjct: 214 KSGQLLCGFPV-VVQASQAEKNQAARLAAQVAGELDLPAK-LQVDNLHMDIAEDDLQTLF 271
Query: 297 ESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSE 328
S G+V +R+ ++ ST VEF + +
Sbjct: 272 -SPFGKVLSVRINKEHGRSTGKGVVEFKTLQD 302
>gi|346472667|gb|AEO36178.1| hypothetical protein [Amblyomma maculatum]
Length = 101
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 40/71 (56%), Gaps = 1/71 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
RT+YV ++D VTEE L +F GQV C+I +P + + FVEF+D + A +AL
Sbjct: 13 RTLYVGNLDIAVTEELLVAVFGQMGQVKGCKIIHEPGND-PYCFVEFSDHQSAASALLAM 71
Query: 239 GTMLGFYPVRV 249
L F V V
Sbjct: 72 NKRLCFGKVSV 82
>gi|157128475|ref|XP_001661445.1| RNA-binding protein precursor, putative [Aedes aegypti]
gi|108872557|gb|EAT36782.1| AAEL011150-PA [Aedes aegypti]
Length = 285
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/158 (25%), Positives = 66/158 (41%), Gaps = 26/158 (16%)
Query: 84 KDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNFNPAFFGPNGFGYTNNFIMHTDGTAN 143
+D R+L M S + P+ + + G + GFG+ N + D
Sbjct: 97 QDLTERELYSMFSTMGPIETCRIMRDVKTGYSY----------GFGFVN--FLSEDAAQR 144
Query: 144 TNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG 203
R NGYS +R+ + Q D++ +Y++++ + +T+EQL +F G
Sbjct: 145 A------IRCLNGYSVRNKRLKVSYARPQSDDIKETNLYITNLPRTITDEQLDIIFGKYG 198
Query: 204 QVVDCRICGD-----PNSVLRFAFVEFTDEEGARAALS 236
+V I D P V AFV F E A+ A+S
Sbjct: 199 TIVQKNILRDKLTGFPRGV---AFVRFNKREEAQEAIS 233
>gi|449448446|ref|XP_004141977.1| PREDICTED: RNA-binding protein 39-like [Cucumis sativus]
Length = 598
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/173 (28%), Positives = 78/173 (45%), Gaps = 9/173 (5%)
Query: 162 RRMNCR--TSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
RRM + T+ + D E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 211 RRMKEKKDTTEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRR 270
Query: 219 R--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNP-TFLPRSEDEREMCS 275
+VEF D A++L+G +L PV V PS+ V T
Sbjct: 271 SKGVGYVEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNTTGASGAGPYGAVD 330
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMV 326
R +Y N+ +T+ ++ FE+ G V+ ++L D + H FV+FA +
Sbjct: 331 RKLYVGNLHFNMTETHLREIFEAF-GPVELVQLPLDLESGHCKGFGFVQFAHL 382
>gi|91095037|ref|XP_975975.1| PREDICTED: similar to poly A binding protein isoform 4 [Tribolium
castaneum]
gi|270014772|gb|EFA11220.1| hypothetical protein TcasGA2_TC005185 [Tribolium castaneum]
Length = 607
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 75/169 (44%), Gaps = 22/169 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D N + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML + K + F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIEKVNGML------LNGKKVYVG----RFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEF 323
+Y N + +T+ ++ FE G++ +++ D S FV F
Sbjct: 192 TNVYVKNFGEDLTEEQLRTMFEK-YGKITSYKIMSKDDGKSKGFGFVAF 239
Score = 38.1 bits (87), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F T G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHTDITEAMLFEKFSTAGPVLSIRVCRDLITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSK 253
+ ++ P+R++ S+
Sbjct: 72 MNFDLIKGRPIRIMWSQ 88
>gi|398404546|ref|XP_003853739.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
gi|339473622|gb|EGP88715.1| hypothetical protein MYCGRDRAFT_56466 [Zymoseptoria tritici IPO323]
Length = 763
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 66/142 (46%), Gaps = 18/142 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D ++R+T V++ ++D + + L F G ++ C++ D N+ + +
Sbjct: 124 CRIMWSQRDPLLRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDENANSKGY 183
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ ++ G +L V V +P K ++ V +E +
Sbjct: 184 GFVHYETAEAANQAIKNVNGMLLNEKKVFVGHHIPKKDRMSKV---------EEMKANFT 234
Query: 277 TIYCTNIDKKVTQGDIKLFFES 298
IY NID + T + + FE
Sbjct: 235 NIYVKNIDSETTDNEFRELFEK 256
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 40/76 (52%), Gaps = 3/76 (3%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALSL 237
+YV ++D VTE L LF + GQV R+C D L +A+V + +G RA L
Sbjct: 55 LYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNVAGDGERALEEL 114
Query: 238 AGTMLGFYPVRVLPSK 253
T++ P R++ S+
Sbjct: 115 NYTLIKGRPCRIMWSQ 130
>gi|328792887|ref|XP_624017.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1 [Apis
mellifera]
Length = 367
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 70/153 (45%), Gaps = 14/153 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A +A+ ++
Sbjct: 57 IFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKSKGYGFVSFVKKAEAESAIGAM 116
Query: 238 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
G LG + R P+ + A P ++ + T+YC + +T+
Sbjct: 117 NGQWLGSRSIRTNWATRKPPAPKSEANAKPLTFDEVYNQSSPTNCTVYCGGLTNGLTEEL 176
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
++ F S G +Q +R+ D + AF+ F+
Sbjct: 177 MQKTF-SPFGSIQEIRVFKDKGY----AFIRFS 204
>gi|302683360|ref|XP_003031361.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
gi|300105053|gb|EFI96458.1| hypothetical protein SCHCODRAFT_257452 [Schizophyllum commune H4-8]
Length = 624
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/179 (27%), Positives = 79/179 (44%), Gaps = 25/179 (13%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
YS K R CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++
Sbjct: 105 YSSIKNR-PCRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 163
Query: 213 DPNSVLR-FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-- 268
D + + + FV + E A A+ S+ G +L V V P + R E
Sbjct: 164 DEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVYVGP-----------HISRKERQ 212
Query: 269 ---DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
DE +Y NID +VT + + F+ G+VQ L D Q + FV F
Sbjct: 213 SKIDEMRAHFTNLYVKNIDPEVTDEEFENLFKQY-GQVQSSLLKRDDQGRNLGFGFVNF 270
>gi|325188438|emb|CCA22974.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 957
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 62/121 (51%), Gaps = 10/121 (8%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFL-TCGQVVDCRICGDPNSV-LR---FAFVEFTDEEGAR 232
R T++VS+ID++VTE+QL ++F + + R+ + L+ FA+V F DEE +
Sbjct: 665 RHTLFVSNIDKEVTEDQLRSIFSDSAPNLQSVRLVAKKRAHGLKSRGFAYVSFLDEESCQ 724
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL L G ++ PVR+ ++ L SED RT+Y N+ + + I
Sbjct: 725 TALQLDGMVVKGKPVRI--HSYDVSTGTSFSLTHSEDS---AMRTLYIGNLQRILASDTI 779
Query: 293 K 293
+
Sbjct: 780 R 780
>gi|297827151|ref|XP_002881458.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
gi|297327297|gb|EFH57717.1| PAB7 binding protein 7 [Arabidopsis lyrata subsp. lyrata]
Length = 609
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/156 (29%), Positives = 74/156 (47%), Gaps = 10/156 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGAR-AALSLA 238
VY+ ++D V E+ L F G++V I D N + + +AFV F E AR AA ++
Sbjct: 203 VYMKNLDADVNEDLLREKFSEFGKIVSLAIAKDENGLCKGYAFVNFDKPEDARWAAETMN 262
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--IYCTNIDKKVTQGDIK 293
GT G Y R + F + E E+ M ++ IY NI+ VT+ +++
Sbjct: 263 GTRFGSKCLYVGRAQKKAEREQLLREQFKEKHE-EQMMKAKVSNIYVKNINVGVTEEELR 321
Query: 294 LFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMVSE 328
F S CG + +L+ D + ++ FV F+ E
Sbjct: 322 KHF-SQCGTITSTKLMCDEKGKSKGFGFVCFSTPEE 356
>gi|452843390|gb|EME45325.1| hypothetical protein DOTSEDRAFT_71152 [Dothistroma septosporum
NZE10]
Length = 785
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 75/168 (44%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 127 CRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGY 186
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A +A+ S+ G +L V V +P K ++ +E +
Sbjct: 187 GFVHYETAEAANSAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 237
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
IY NID + T + + FE G++ L D + +R FV +
Sbjct: 238 NIYVKNIDPEATDDEFRALFEKY-GDITSASLAHDQEGKSRGFGFVNY 284
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 57 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSANDGERALEE 116
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 117 LNYTLIKGKPCRIMWSQ 133
>gi|326523691|dbj|BAJ93016.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 244
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 68/140 (48%), Gaps = 19/140 (13%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF-TDEEG 230
+E+ R +YV +I + VT ++L+ +F G VV + D S RF FV T EE
Sbjct: 64 EELATRKLYVGNIPRTVTNDELSAMFAAHGTVVRAEVMYDKYSGRSRRFGFVTMSTAEEV 123
Query: 231 ARAALSLAGTMLGFYPVRV------LPSKTAIAPVN-PTFLPRSEDEREMCSRTIYCTNI 283
A A SL T +G ++V LP+ A AP + P+F+ +Y N+
Sbjct: 124 AAAIESLNDTEVGGRKIKVNVTESFLPNIDASAPESEPSFVD--------SQYKVYVGNL 175
Query: 284 DKKVTQGDIKLFFESVCGEV 303
KKVT +K FF S GEV
Sbjct: 176 AKKVTTEVLKNFF-SEKGEV 194
>gi|46121573|ref|XP_385341.1| hypothetical protein FG05165.1 [Gibberella zeae PH-1]
Length = 568
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 156 GYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
G +R N Q +DE RRTV+V + ++ +L F G V + +I D
Sbjct: 153 GRDDDRRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKD 212
Query: 214 PNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPR 266
S +VEF +EE AL L G L PV V ++ A P P
Sbjct: 213 RISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPN 272
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
S + +Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 273 S-----IPFHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQF 324
>gi|345497985|ref|XP_001603213.2| PREDICTED: nucleolysin TIA-1 isoform p40-like [Nasonia vitripennis]
Length = 386
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 74/164 (45%), Gaps = 14/164 (8%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTD 227
NA ++ ++V D+ ++ + L F G++ DCR+ DP ++ + FV F
Sbjct: 51 NASVNKSEHYHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTMKSKGYGFVSFVK 110
Query: 228 EEGARAAL-SLAGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
+ A +A+ ++ G LG + R P+ + A P ++ + T+YC
Sbjct: 111 KAEAESAIGAMNGQWLGSRSIRTNWATRKPPAPKSEANTKPLTFDEVYNQSSPTNCTVYC 170
Query: 281 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+ +T+ ++ F S G +Q +R+ D + AF+ F+
Sbjct: 171 GGLTNGLTEELMQKTF-SPFGSIQEIRVFKDKGY----AFIRFS 209
>gi|412991277|emb|CCO16122.1| predicted protein [Bathycoccus prasinos]
Length = 620
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 55/111 (49%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D++ TE QL LF T G VV R+C D L +A+V F+ ++ ARA
Sbjct: 44 SLYVGDLESSATEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFSQAQDAARAIDV 103
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L ++ P+R+L S+ +PT R+ I+ N+DK +
Sbjct: 104 LNFQVVNGKPIRILYSQR-----DPTI-------RKSGVGNIFIKNLDKDI 142
Score = 43.1 bits (100), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+Y+ +++ +E L LF G + CR+ D + V R AFV F+ EE RA L
Sbjct: 326 LYIKNLEDGADDETLRELFKEFGTITSCRVMRDASGVSRGSAFVAFSSPEEATRAVTELN 385
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 386 GKMVGAKPLYV 396
>gi|291232664|ref|XP_002736265.1| PREDICTED: poly(A) binding protein, nuclear 1-like [Saccoglossus
kowalevskii]
Length = 231
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEE 229
EV R+VYV ++D T E+L F CG V + C + G P FA++E+ D++
Sbjct: 97 EVDARSVYVGNVDYSATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYIEYADKD 153
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ +L+L ++ ++VLP +T
Sbjct: 154 SVQTSLALDESLFKGRQIKVLPKRT 178
>gi|332376136|gb|AEE63208.1| unknown [Dendroctonus ponderosae]
Length = 371
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 1/62 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 DEAYPKTLYVGNLDISVQEDLLCALFSQIGPVKGCKIIREPGND-PYAFVEFTNHQSAST 61
Query: 234 AL 235
AL
Sbjct: 62 AL 63
>gi|302915553|ref|XP_003051587.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
gi|256732526|gb|EEU45874.1| hypothetical protein NECHADRAFT_68161 [Nectria haematococca mpVI
77-13-4]
Length = 564
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 71/164 (43%), Gaps = 14/164 (8%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
T +DE RRTV+V + ++ +L F G V + +I D S +VEF
Sbjct: 167 TPQLTEDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEF 226
Query: 226 TDEEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
+EE AL L G L PV V ++ A P P S + +Y
Sbjct: 227 KNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNS-----IPFHRLYV 281
Query: 281 TNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 282 GNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQF 324
>gi|380019828|ref|XP_003693803.1| PREDICTED: polyadenylate-binding protein 1-like [Apis florea]
Length = 630
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML +V K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ M+ P+R++ S+ R R+ ++ N+DK +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI 110
>gi|225430808|ref|XP_002271291.1| PREDICTED: splicing factor 3B subunit 4 [Vitis vinifera]
Length = 373
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/124 (31%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QVTEE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV +K S+D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRV--NKA------------SQDKKSLDVGANLFVGNLDPDV---DEKL 127
Query: 295 FFES 298
+++
Sbjct: 128 LYDT 131
>gi|158285093|ref|XP_560351.3| AGAP003899-PA [Anopheles gambiae str. PEST]
gi|98986313|tpe|CAJ55784.1| TPA: sex-lethal [Anopheles gambiae]
gi|157020733|gb|EAL41988.3| AGAP003899-PA [Anopheles gambiae str. PEST]
Length = 302
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV---LRFAFVEFTDEEGARAALSLAG 239
V+ + Q +TE ++ ++F G + CR+ D F FV + +EE A+ A+
Sbjct: 108 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 165
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
L YP+R K + A P+S+D +E +Y TN+ + +T+ + + F
Sbjct: 166 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 214
Query: 300 CGEVQRLRLLGDYQHSTR-IAFVEF 323
VQ+ L R +AFV F
Sbjct: 215 GTIVQKNILRDKLTGQPRGVAFVRF 239
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----R 209
NGY +R+ + Q D++ +Y++++ + +TEEQL +F G +V +
Sbjct: 167 NGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDK 226
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALS 236
+ G P V AFV F E A+ A+S
Sbjct: 227 LTGQPRGV---AFVRFNKREEAQEAIS 250
>gi|389629168|ref|XP_003712237.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|158514092|sp|A4QUF0.1|PABP_MAGO7 RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|351644569|gb|EHA52430.1| polyadenylate-binding protein [Magnaporthe oryzae 70-15]
gi|440469069|gb|ELQ38192.1| polyadenylate-binding protein [Magnaporthe oryzae Y34]
gi|440487573|gb|ELQ67355.1| polyadenylate-binding protein [Magnaporthe oryzae P131]
Length = 762
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 132 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 191
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K + DE +
Sbjct: 192 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKDRQSKF---------DEMKANFT 242
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
IY NI+ +VT + + FE G+V L D + S FV F
Sbjct: 243 NIYVKNINPEVTDDEFRTLFEKY-GDVTSSSLARDQETGKSRGFGFVNF 290
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + T +G +A
Sbjct: 62 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTADGEKALEE 121
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 122 LNYTLIKGRPCRIMWSQ 138
>gi|24649513|ref|NP_732942.1| Rox8, isoform B [Drosophila melanogaster]
gi|24649515|ref|NP_732943.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301090|gb|AAF56224.1| Rox8, isoform C [Drosophila melanogaster]
gi|7301091|gb|AAF56225.1| Rox8, isoform B [Drosophila melanogaster]
Length = 464
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|47575772|ref|NP_001001230.1| polyadenylate-binding protein 2 [Xenopus (Silurana) tropicalis]
gi|82237242|sp|Q6NVP7.1|PABP2_XENTR RecName: Full=Polyadenylate-binding protein 2; Short=PABP-2;
Short=Poly(A)-binding protein 2; AltName: Full=Nuclear
poly(A)-binding protein 1; AltName: Full=Poly(A)-binding
protein II; Short=PABII; AltName:
Full=Polyadenylate-binding nuclear protein 1
gi|45708904|gb|AAH67958.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
gi|89268254|emb|CAJ82538.1| poly(A) binding protein, nuclear 1 [Xenopus (Silurana) tropicalis]
Length = 296
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D+E R
Sbjct: 163 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKYTGHPKG---FAYIEFSDKESVRT 219
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 220 SLALDESLFRGRQIKVVPKRT 240
>gi|408394044|gb|EKJ73300.1| hypothetical protein FPSE_06565 [Fusarium pseudograminearum CS3096]
Length = 568
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 75/178 (42%), Gaps = 16/178 (8%)
Query: 156 GYSQGKRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD 213
G +R N Q +DE RRTV+V + ++ +L F G V + +I D
Sbjct: 153 GRDDDRRETKREEGNPQLTEDERDRRTVFVQQLAARLRTRELKEFFERVGPVNEAQIVKD 212
Query: 214 PNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPR 266
S +VEF +EE AL L G L PV V ++ A P P
Sbjct: 213 RISQRSKGVGYVEFKNEESVTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPN 272
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
S + +Y NI VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 273 S-----IPFHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQF 324
>gi|383862667|ref|XP_003706805.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1
[Megachile rotundata]
Length = 630
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV F EE A ++ + G +L V V F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDKVNGMLLNGKKVYV-----------GKFIPRKEREKELGEKAKL 190
Query: 278 ---IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 191 FTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ M+ P+R++ S+ R R+ ++ N+DK +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI 110
>gi|170057956|ref|XP_001864710.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
gi|167877220|gb|EDS40603.1| fuse-binding protein-interacting repressor siahbp1 [Culex
quinquefasciatus]
Length = 661
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ EGA+ AL +
Sbjct: 175 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 234
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 235 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKNYNR-IYIASIHPDLTEEDIKSVFE 291
Query: 298 SVCGEVQRLRL-LGDYQHSTR-IAFVEF 323
+ G + ++ G HS + AF+E+
Sbjct: 292 AF-GAIATCKMSQGSSAHSHKGYAFIEY 318
>gi|154339694|ref|XP_001565804.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063122|emb|CAM45321.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 493
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 41/84 (48%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 232
QD++ RT+Y+S + + + L L G V RIC FAFVE EGA
Sbjct: 373 QDQMRCRTIYISHLPGLLPQSMLLELLTAAGPVNKVRICTGAGYSTLFAFVEMRTAEGAH 432
Query: 233 AALSLAGTMLGFYPVRVLPSKTAI 256
A+ + G L Y +RV ++ A+
Sbjct: 433 RAMCMNGLQLMGYTIRVETARNAV 456
>gi|357625522|gb|EHJ75940.1| hypothetical protein KGM_20346 [Danaus plexippus]
Length = 245
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/153 (22%), Positives = 71/153 (46%), Gaps = 14/153 (9%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 237
++V D+ ++ + L F G++ DCR+ DP ++ + FV F + A +A++ +
Sbjct: 56 IFVGDLSPEIETQNLRDAFAPFGEISDCRVVRDPQTLKSKGYGFVSFLKKSEAESAITAM 115
Query: 238 AGTMLGFYPVRV-LPSKTAIAPVN-----PTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
G LG +R ++ AP N P ++ + T+YC + +T+
Sbjct: 116 NGQWLGSRSIRTNWATRKPPAPKNELNSKPLTFDEVYNQSSPTNCTVYCGGLTAGLTEEL 175
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
++ F+ G +Q +R+ D + AF+ F+
Sbjct: 176 MQKTFQPF-GTIQEIRVFKDKGY----AFIRFS 203
>gi|356537017|ref|XP_003537028.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 502
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+Y+ ++D +TE L F + G+++ I D N + + FAFV + + + AR A+ ++
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLVISKDDNGLSKGFAFVNYENPDDARKAMEAMN 252
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G G Y R ++ F R E + + +Y NID VT +++
Sbjct: 253 GLKFGSKNLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRD 312
Query: 295 FFESVCGEVQRLRLLGD 311
F S CG + ++++ D
Sbjct: 313 LFSS-CGTITSVKVMRD 328
Score = 43.1 bits (100), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+YV +ID VT+++L LF +CG + ++ D + + F FV F++ EE +A S
Sbjct: 296 LYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVRSFN 355
Query: 239 GTMLGFYPVRV 249
G M P+ +
Sbjct: 356 GCMFHRKPLYI 366
>gi|354548064|emb|CCE44800.1| hypothetical protein CPAR2_406030 [Candida parapsilosis]
Length = 173
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDE 228
A+Q+E R+VYV ++D + T EQL F G + I D S L +A+VEF +
Sbjct: 27 AKQEEADSRSVYVGNVDYKATPEQLEEFFRPVGVIDRVTILFDKYSGLPKGYAYVEFENI 86
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAI 256
E A+ L G +RV P +T I
Sbjct: 87 ESVNKAVDLHGKEFRGREIRVSPKRTNI 114
>gi|322709421|gb|EFZ00997.1| oligouridylate binding protein ,putative [Metarhizium anisopliae
ARSEF 23]
Length = 472
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 71/153 (46%), Gaps = 18/153 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +YV ++Q+VTE+ L +F T G V + +I D N+ + FVE+ D A
Sbjct: 80 EPNKRALYVGGLEQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAER 139
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGDI 292
A+S T+ G +R VN + + ++ + S I+ ++ +V DI
Sbjct: 140 AMS---TLNGRREIR----------VNWAYQSNTSNKEDTSSHFHIFVGDLSNEVND-DI 185
Query: 293 KLFFESVCGEVQRLRLLGDYQHS-TR-IAFVEF 323
L S G V R++ D + TR FV F
Sbjct: 186 LLQAFSAFGTVSEARVMWDMKTGRTRGYGFVAF 218
>gi|401424605|ref|XP_003876788.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493031|emb|CBZ28316.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 423
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 78/205 (38%), Gaps = 30/205 (14%)
Query: 141 TANTNGH-TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRT----------VYVSDIDQQ 189
T GH TTT +G S GK ++ ++RR+ V +S I
Sbjct: 89 TEKPPGHATTTAADADGDSNGKTVATAASAEPGAALLMRRSADAEKTSKNKVVISSIYPH 148
Query: 190 VTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
T QL +F CG + D + AFV +T EE AL L GTM+ PV V
Sbjct: 149 TTRAQLREVFSPCGAICDFHLI----PTRHMAFVGYTTEEAYEKALKLDGTMVNGNPVAV 204
Query: 250 LPSKT---AIAPVNPTFLPRSEDE--------REMCSRTIYCTNIDKKVTQGDIKLFFES 298
P A AP + R +E R + + VT+ ++ FF
Sbjct: 205 RPCPPRDDAPAPASRRDAMRRGNEGTTTSAPNRRQLDVRVVVHGVPSDVTKEALRAFFSP 264
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEF 323
CG + + + + +AFV F
Sbjct: 265 DCGPLTDVFIKPEIG----VAFVAF 285
>gi|342884065|gb|EGU84408.1| hypothetical protein FOXB_05073 [Fusarium oxysporum Fo5176]
Length = 566
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 70/159 (44%), Gaps = 14/159 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
+DE RRTV+V + ++ +L F G V + +I D S +VEF +EE
Sbjct: 172 EDERDRRTVFVQQLAARLRTRELKEFFEKVGPVNEAQIVKDRISQRSKGVGYVEFKNEES 231
Query: 231 ARAALSLAGTMLGFYPVRVL-----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
AL L G L PV V ++ A P P S + +Y NI
Sbjct: 232 VTQALQLTGQKLLGIPVIVQVTEAEKNRQARNPEASGPHPNS-----IPFHRLYVGNIHF 286
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
VT+ D++ FE GE++ ++L D +R FV+F
Sbjct: 287 NVTEQDLQAVFEPF-GELEFVQLQKDENGRSRGYGFVQF 324
>gi|156100785|ref|XP_001616086.1| RNA binding protein [Plasmodium vivax Sal-1]
gi|148804960|gb|EDL46359.1| RNA binding protein, putative [Plasmodium vivax]
Length = 611
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 39/69 (56%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+V + +Y+ ++ +E+ + LF + G ++ + + AFVEFT+EE A+AA
Sbjct: 162 DVFSKIIYMENVPANCSEDDIKALFKSVGTTTSYKLQYNEQKKMNTAFVEFTNEEHAKAA 221
Query: 235 LSLAGTMLG 243
L L GT +G
Sbjct: 222 LLLNGTKIG 230
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
I VYV ++ VTE+ + F +C +++ P ++ +EF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 237 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 263
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISQNPPF 91
>gi|67592644|ref|XP_665658.1| poly(A) binding protein II [Cryptosporidium hominis TU502]
gi|54656446|gb|EAL35428.1| poly(A) binding protein II [Cryptosporidium hominis]
Length = 263
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
G+ M+ + DE ++R++Y+ ++D +L LF +CG + I D + +
Sbjct: 92 GESMMDTDLPGSADDEEMKRSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMP 151
Query: 220 --FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
FA++EF + E AL G M ++V + I N
Sbjct: 152 KGFAYLEFCEPEAVETALKFDGAMFRGRQIKVSTKRKNIPGYN 194
>gi|340719922|ref|XP_003398393.1| PREDICTED: polyadenylate-binding protein 1-like isoform 3 [Bombus
terrestris]
Length = 621
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML + K + F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML------LNGKKVYVG----KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ M+ P+R++ S+ R R+ ++ N+DK +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI 110
>gi|297835442|ref|XP_002885603.1| hypothetical protein ARALYDRAFT_898933 [Arabidopsis lyrata subsp.
lyrata]
gi|297331443|gb|EFH61862.1| hypothetical protein ARALYDRAFT_898933 [Arabidopsis lyrata subsp.
lyrata]
Length = 985
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 45/78 (57%), Gaps = 4/78 (5%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+++ + VS++ +T EQL LF CG VVDC I + A++E+++ E A AAL+
Sbjct: 348 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKH----LAYIEYSNSEEATAALA 403
Query: 237 LAGTMLGFYPVRVLPSKT 254
L T + P+ V +K+
Sbjct: 404 LNNTEVFGRPLNVEIAKS 421
>gi|304798|gb|AAA28828.1| polyadenylate-binding protein [Drosophila melanogaster]
gi|304800|gb|AAA02941.1| polyadenylate-binding protein [Drosophila melanogaster]
Length = 465
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|294886819|ref|XP_002771869.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239875669|gb|EER03685.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 420
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 49/93 (52%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
++ ++ +++RTVYVS + QVT E++ +F G++ + I P +FA VEF +E
Sbjct: 129 DSGEEMILKRTVYVSGLANQVTLEEVQGMFGHFGEIKESSIDVSPYDQCQFALVEFQNEA 188
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A+ A+ + VRV SK + PT
Sbjct: 189 AAQEAIRVGEIPYRGRVVRVEKSKETVKLYPPT 221
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
T++V ++ Q E+ L LF +V++ +I P + LR+A V+F G AA SL G
Sbjct: 7 TIFVRNLAVQANEQNLRDLFSRLDRVINVQIMTFPGTSLRYARVDFGTSNGVTAAHSLNG 66
Query: 240 TMLGFYPVRV 249
P+ V
Sbjct: 67 QPFHGVPLTV 76
>gi|338762832|gb|AEI98619.1| hypothetical protein 111O18.6 [Coffea canephora]
Length = 368
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D NS + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNSHQGYGFVEFRSEEDADYAIKV 85
Query: 238 AGTMLGFY--PVRV 249
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|413951768|gb|AFW84417.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
Length = 114
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALS 236
RTV++ ++D++V+E L + + G VVD + D NS+ +AFVE+ EE A+ A+
Sbjct: 7 RTVFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEIAQYAVK 66
Query: 237 L 237
L
Sbjct: 67 L 67
>gi|403335220|gb|EJY66784.1| RNA-binding proteins (RRM domain) [Oxytricha trifallax]
Length = 307
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 77/170 (45%), Gaps = 25/170 (14%)
Query: 164 MNCRTSNAQQDEVIRR----TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSV 217
MN + S+ + R T+YV ++D +V EE + LFL CG +V+ I D N
Sbjct: 1 MNDKLSHLAGGPLFERNQEATLYVGNLDTKVNEELVWELFLQCGAIVNVHIPRDKVTNEH 60
Query: 218 LRFAFVEFTDEEGARAALSLAGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDER-EMCS 275
+ FVEF EE A A+ + + F P++V + S+D+R +
Sbjct: 61 SGYGFVEFKTEEDADYAIKIMHMVKLFGKPIKVNKA--------------SQDKRTQEVG 106
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEF 323
++ N+ + V + ++ F S G V +++ D Q S R FV +
Sbjct: 107 ANVFVGNLHEDVDEKMLRDVFSSF-GIVLSTKIMRDPETQVSKRYGFVSY 155
>gi|340381668|ref|XP_003389343.1| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Amphimedon queenslandica]
Length = 402
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 73/148 (49%), Gaps = 17/148 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC---GDPNSVLRFAFVEFTDEEGARAALS 236
T++VS++ E+QL LF CGQV D R+ G +A+VEFT E AL
Sbjct: 170 TIFVSNLASDTDEDQLHKLFSQCGQVADVRLIKKFGGKFGTNVYAYVEFTTSEPTVEALK 229
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T+L R + + A + ++ T++ TN+ +++ D++ F
Sbjct: 230 LDHTVLN---SRAIYVSSCNADRQNKYNNKA---------TVFVTNVAHDLSERDLEDIF 277
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ V +V+ +RL+ + + ++ A++E+
Sbjct: 278 KEV-DQVKAVRLVRNKKGRSKGFAYIEY 304
>gi|255555393|ref|XP_002518733.1| polyadenylate-binding protein, putative [Ricinus communis]
gi|223542114|gb|EEF43658.1| polyadenylate-binding protein, putative [Ricinus communis]
Length = 644
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 67/150 (44%), Gaps = 15/150 (10%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAA 234
+ ++YV D++ VT+ L LF GQVV R+C D + L + +V ++ + A A
Sbjct: 22 VTTSLYVGDLEANVTDSHLYDLFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSSPQDAARA 81
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L ML F P+ P + + +P+ R+ S I+ N+DK + +
Sbjct: 82 LD----MLNFTPLNGSPIRIMYSHRDPSV-------RKSGSGNIFIKNLDKGIDHKALHD 130
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F S G + ++ D S FV+F
Sbjct: 131 TF-SAFGNILSCKVATDSSGQSKGYGFVQF 159
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DPN + R + FV F T EE ++A + +
Sbjct: 308 LYIKNLDDSIGDDRLKQLFSPFGTITSCKVMRDPNGISRGSGFVAFSTPEEASKALMEMN 367
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 368 GKMVVSKPLYV 378
Score = 42.0 bits (97), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 32/140 (22%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ +++ ++D+ + + L F G ++ C++ D + + +
Sbjct: 95 IRIMYSHRDPSVRKSGSGNIFIKNLDKGIDHKALHDTFSAFGNILSCKVATDSSGQSKGY 154
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A+ A+ L G +L V V P FL + E E +
Sbjct: 155 GFVQFDNEESAQKAIEKLNGMLLNDKQVYVGP-----------FLRKQERESAIDKTRFN 203
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 204 NVYVKNLSETTTEEDLKKAF 223
>gi|195331490|ref|XP_002032434.1| GM23518 [Drosophila sechellia]
gi|194121377|gb|EDW43420.1| GM23518 [Drosophila sechellia]
Length = 464
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDTSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|194742700|ref|XP_001953839.1| GF17967 [Drosophila ananassae]
gi|190626876|gb|EDV42400.1| GF17967 [Drosophila ananassae]
Length = 471
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGHVKSCKIIREPGND-PYAFIEYSTYQAATT 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|66475216|ref|XP_627424.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
gi|46228897|gb|EAK89746.1| Sgn1p-like RRM domain containing protein [Cryptosporidium parvum
Iowa II]
Length = 262
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
G+ M+ + DE ++R++Y+ ++D +L LF +CG + I D + +
Sbjct: 91 GESMMDTDLPGSADDEEMKRSIYIGNVDYGTKLTELQDLFKSCGSINRITIMNDKRTGMP 150
Query: 220 --FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
FA++EF + E AL G M ++V + I N
Sbjct: 151 KGFAYLEFCEPEAVETALKFDGAMFRGRQIKVSTKRKNIPGYN 193
>gi|45201218|ref|NP_986788.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|74691820|sp|Q74ZS6.1|PABP_ASHGO RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|44986072|gb|AAS54612.1| AGR122Cp [Ashbya gossypii ATCC 10895]
gi|374110037|gb|AEY98942.1| FAGR122Cp [Ashbya gossypii FDAG1]
Length = 585
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+ +Y+ ++ + + L F T G ++ C++ D N V R F
Sbjct: 109 CRIMWSQRDPSLRKKGSGNIYIKNLHPAIDNKSLHETFSTFGNILSCKVATDENGVSRGF 168
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV F +E AR A+ ML + + ++ + R E+ ++ +
Sbjct: 169 GFVHFENESDARDAIEAVDGML-------MNDQEVYVALHVSKKDRQSKLEEVKAKFTNV 221
Query: 279 YCTNIDKKVTQGDIKLFF 296
Y NID++ +Q + + F
Sbjct: 222 YVKNIDQETSQEEFEELF 239
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 64/148 (43%), Gaps = 17/148 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEE-GARAALS 236
++YV +++ V+E L +F G V R+C D N+ L +A+V F D E G +A
Sbjct: 39 SLYVGELEPTVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGPKAIEQ 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T++ P R++ S+ R R+ S IY N+ + + F
Sbjct: 99 LNYTLIKGKPCRIMWSQ------------RDPSLRKKGSGNIYIKNLHPAIDNKSLHETF 146
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
S G + ++ D +R FV F
Sbjct: 147 -STFGNILSCKVATDENGVSRGFGFVHF 173
>gi|452986581|gb|EME86337.1| hypothetical protein MYCFIDRAFT_97432, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 540
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVE 224
+T DE RRTV+V + ++ +L F G VVD +I D S +VE
Sbjct: 146 KTPEPTDDERDRRTVFVQQLAARLRSRELKEFFQQVGDVVDAQIVKDRVSGRSKGVGYVE 205
Query: 225 FTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------R 276
F +EE + A+ L G L P+ IA + R E +
Sbjct: 206 FKEEESVQKAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNTEGTATQSNGIPFH 257
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
+Y NI +T+ D+K FE GE++ ++L + S FV+F
Sbjct: 258 RLYVGNIHFSITEDDLKNVFEPF-GELEFVQLQKEEAGRSKGYGFVQF 304
>gi|342879464|gb|EGU80711.1| hypothetical protein FOXB_08751 [Fusarium oxysporum Fo5176]
Length = 794
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 73/170 (42%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+ V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKNGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI VT+ D + FE G+V L D + +R FV F
Sbjct: 239 FTNVYVKNIAPDVTEDDFRELFEKF-GDVTSSSLARDQEGKSRGFGFVNF 287
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 39/77 (50%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNATADGEKALEE 119
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 120 LNYTLIKGRPCRIMWSQ 136
>gi|383862669|ref|XP_003706806.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2
[Megachile rotundata]
Length = 612
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/169 (22%), Positives = 72/169 (42%), Gaps = 22/169 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV F EE A ++ + G +L V V F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDKVNGMLLNGKKVYV-----------GKFIPRKEREKELGEKAKL 190
Query: 278 ---IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 191 FTNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHADITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ M+ P+R++ S+ R R+ ++ N+DK +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI 110
>gi|358386241|gb|EHK23837.1| hypothetical protein TRIVIDRAFT_169516 [Trichoderma virens Gv29-8]
Length = 747
Score = 48.5 bits (114), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 130 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 189
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 190 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGYHIPKKD-----------RQSKFEEMKAN 238
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI VT + + FE G+V L D + R FV F
Sbjct: 239 FTNVYVKNIGPDVTDDEFRELFEKF-GDVTSSSLARDQEGKPRGFGFVNF 287
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 60 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 119
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 120 LNYTLIKGRPCRIMWSQ 136
>gi|340719918|ref|XP_003398391.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
terrestris]
Length = 630
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML + K + F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML------LNGKKVYVG----KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ M+ P+R++ S+ R R+ ++ N+DK +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI 110
>gi|345496336|ref|XP_001602582.2| PREDICTED: squamous cell carcinoma antigen recognized by T-cells
3-like [Nasonia vitripennis]
Length = 924
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 83/175 (47%), Gaps = 18/175 (10%)
Query: 156 GYSQGKRRMNCRTSNAQQ-DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
GY + +M +N Q+ D I TV+VS++D TEE++ ++ R+ D
Sbjct: 656 GYEEADEKMEEDMNNLQEADPNI--TVFVSNLDYTATEEEVREALKPIWPIISFRMVKDF 713
Query: 215 NSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPV---RVLPSKTAIAPVNPTFLPRSEDE 270
+ F +V + EE AL L T + P+ R P KT+ P+ F ++E E
Sbjct: 714 KGRSKGFCYVSLSSEEAVNEALKLDRTRINGRPMFISRCDPDKTSRGPI---FKYKTELE 770
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
+ ++ + T+ D++ F V G ++ +R++ Y+ HS +A+VEF
Sbjct: 771 K----NKLFVKGLSPTTTKEDLENIF-RVHGSLKDVRIVT-YRNGHSKGLAYVEF 819
>gi|24649519|ref|NP_732945.1| Rox8, isoform D [Drosophila melanogaster]
gi|442620772|ref|NP_732944.2| Rox8, isoform E [Drosophila melanogaster]
gi|442620774|ref|NP_001262897.1| Rox8, isoform G [Drosophila melanogaster]
gi|442620776|ref|NP_001262898.1| Rox8, isoform H [Drosophila melanogaster]
gi|23172126|gb|AAN13978.1| Rox8, isoform D [Drosophila melanogaster]
gi|211938549|gb|ACJ13171.1| FI04408p [Drosophila melanogaster]
gi|440217818|gb|AAN13977.2| Rox8, isoform E [Drosophila melanogaster]
gi|440217819|gb|AGB96277.1| Rox8, isoform G [Drosophila melanogaster]
gi|440217820|gb|AGB96278.1| Rox8, isoform H [Drosophila melanogaster]
Length = 470
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|224062834|ref|XP_002300896.1| predicted protein [Populus trichocarpa]
gi|222842622|gb|EEE80169.1| predicted protein [Populus trichocarpa]
Length = 648
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 57/122 (46%), Gaps = 16/122 (13%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDEEGARAALS 236
R++YV D++ V E QL LF VV R+C D + L +A+V F++ + A A+
Sbjct: 33 RSLYVGDLEHNVKEGQLFDLFSQVAPVVSTRVCRDQAGLTSLGYAYVNFSNPQDAAKAME 92
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ L F P+ P + + +PT R ++ N+D K+ D K +
Sbjct: 93 V----LNFTPLNGKPIRIMFSHRDPT-------TRRSGHANVFIKNLDTKI---DNKALY 138
Query: 297 ES 298
E+
Sbjct: 139 ET 140
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 37/165 (22%), Positives = 75/165 (45%), Gaps = 16/165 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D RR+ V++ ++D ++ + L F + G V+ C++ D N + +
Sbjct: 104 IRIMFSHRDPTTRRSGHANVFIKNLDTKIDNKALYETFASFGPVLSCKVAVDNNGQSKGY 163
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
F++F +EE A++A++ L G ++ V V P + + P+ + +Y
Sbjct: 164 GFIQFENEEDAQSAINRLNGMLVNDREVYVGPFVRRLERIEANGSPKFTN--------VY 215
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
N+ + + D+K F S G + ++ D +R FV F
Sbjct: 216 VKNLSETTSDEDLKKIFSS-YGAITSAIVMKDQNGKSRGFGFVNF 259
Score = 41.2 bits (95), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 35/137 (25%), Positives = 63/137 (45%), Gaps = 16/137 (11%)
Query: 127 GFGYTNNFIMHTDGTA----NTNGHTTT-------RRKRNGYSQGKRRMNC-RTSNAQQD 174
GFG+ N D A NG T + R +R G + + + + N++ +
Sbjct: 253 GFGFVN--FQSPDSAAAAVEKLNGMTFSDKVWYVGRAQRKGEREAELKAKFEQERNSRYE 310
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGAR 232
++ +Y+ ++ + EE+L LF G + C++ D + + + FV F T EE +R
Sbjct: 311 KMKAANLYLKNLGDTIDEERLKELFSEFGSITSCKVMLDQQGLSKGSGFVAFSTPEEASR 370
Query: 233 AALSLAGTMLGFYPVRV 249
A + G M+G P+ V
Sbjct: 371 ALSEMNGKMIGKKPLYV 387
>gi|17944383|gb|AAL48083.1| RE71384p [Drosophila melanogaster]
Length = 470
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|212722530|ref|NP_001132591.1| uncharacterized protein LOC100194063 [Zea mays]
gi|194694844|gb|ACF81506.1| unknown [Zea mays]
gi|195635091|gb|ACG37014.1| polyadenylate-binding protein 2 [Zea mays]
gi|413938966|gb|AFW73517.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA 231
+++V R+VYV ++D T E++ F CG V I D + FA+VEF ++EG
Sbjct: 80 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEGV 139
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
+ AL+L + L ++V P +T +
Sbjct: 140 QEALNLNESELHGRQIKVAPKRTNV 164
>gi|363894957|gb|AEW42987.1| putative polyadenylate-binding protein 1, partial [Haliotis
diversicolor]
Length = 563
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 47/100 (47%), Gaps = 8/100 (8%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ V++ ++D+ + + L F G ++ C+I D N +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKIASDENGSKGYG 141
Query: 222 FVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIA 257
FV F EE AR A+ ML Y + +P K IA
Sbjct: 142 FVHFETEEAARQAIEKVNGMLLNGKKVYVGKFIPRKERIA 181
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 40/150 (26%), Positives = 62/150 (41%), Gaps = 22/150 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ VTE L F T G V+ R+C D L +A+V F A AL
Sbjct: 12 SLYVGDLHPDVTEAMLFEKFSTAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 238 AG--TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
T+ G P+R++ S+ R R+ ++ N+DK + D K
Sbjct: 72 MNFDTIKG-RPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKAL 115
Query: 296 FE--SVCGEVQRLRLLGDYQHSTRIAFVEF 323
++ S G + ++ D S FV F
Sbjct: 116 YDTFSAFGNILSCKIASDENGSKGYGFVHF 145
>gi|358370208|dbj|GAA86820.1| RNA splicing factor (Pad-1) [Aspergillus kawachii IFO 4308]
Length = 571
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSV 217
R RT +DE RRT++V + ++ ++L F G Q+V R+ G V
Sbjct: 165 RSRERTPEPTEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV 224
Query: 218 LRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCS 275
+VEF E+ A+ L G L P+ ++ ++ NP S +
Sbjct: 225 ---GYVEFKSEDAVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE--ASSGNNHAAPF 279
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 280 HRLYVGNIHFSITESDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQF 327
>gi|225438611|ref|XP_002276585.1| PREDICTED: DAZ-associated protein 1-like [Vitis vinifera]
Length = 396
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 64/151 (42%), Gaps = 11/151 (7%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+V R ++V + T E L F GQ+ DC + D N+ + FV F +GA
Sbjct: 88 DVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAV 147
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL G + +++ +A + P+ P+S+D R IY +N+ V +
Sbjct: 148 KALKQPGKK-----INNRMTQSQLASMGPSPPPQSQD---TVGRKIYVSNVQADVDPERL 199
Query: 293 KLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ FF GE++ + D Q F F
Sbjct: 200 RSFFAKF-GEIETGPIGFDTQTGKSRGFALF 229
>gi|429859146|gb|ELA33937.1| polyadenylate-binding protein [Colletotrichum gloeosporioides Nara
gc5]
Length = 688
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 105 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 164
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE A+A + G +L V V +P K R EM +
Sbjct: 165 GFVHYETDEAAAQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 213
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI +VT + + F + G+V L D + +R FV F
Sbjct: 214 FTNVYVKNIANEVTDDEFRDLF-AAFGDVTSSSLARDQEGKSRGFGFVNF 262
>gi|22329932|ref|NP_174676.2| poly(A) binding protein 1 [Arabidopsis thaliana]
gi|332193555|gb|AEE31676.1| poly(A) binding protein 1 [Arabidopsis thaliana]
Length = 407
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F GE+ ++ D + S R FV F
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNF 166
Score = 44.7 bits (104), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D V +L LF G + C++ N + + FVEF T EE ++A L +
Sbjct: 225 LYVKNLDDSVDNTKLEELFSEFGTITSCKVMVHSNGISKGVGFVEFSTSEEASKAMLKMN 284
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 285 GKMVGNKPIYV 295
>gi|326516828|dbj|BAJ96406.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 744
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 56/123 (45%), Gaps = 16/123 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
++YV D+D V + QL +F G VV R+C D S L +A+V + A AL
Sbjct: 126 SLYVGDLDVSVQDAQLFDVFAQIGGVVSVRVCRDVTSRKSLGYAYVNYNTPADAARALE- 184
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
ML F P+ P + + +P+ R+ + I+ N+DK + D K +
Sbjct: 185 ---MLNFTPINGRPIRIMYSNRDPSL-------RKSGTANIFIKNLDKSI---DNKALHD 231
Query: 298 SVC 300
+ C
Sbjct: 232 TFC 234
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/140 (21%), Positives = 63/140 (45%), Gaps = 20/140 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +R++ +++ ++D+ + + L F G ++ C++ DP + +
Sbjct: 196 IRIMYSNRDPSLRKSGTANIFIKNLDKSIDNKALHDTFCVFGNILSCKVATDPAGESKGY 255
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV++ +E A AA+ L G ++ V V P F+ + E + S
Sbjct: 256 GFVQYERDEAAHAAIEKLNGMLMNDKKVYVGP-----------FVRKQERDNSPGSVKFN 304
Query: 277 TIYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 305 NVYVKNLAETTTEDDLKEIF 324
Score = 37.4 bits (85), Expect = 9.2, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D V +E+L LF G + C++ D N R + FV F + ++ +RA +
Sbjct: 409 LYLKNLDDTVDDEKLRELFAEFGTITSCKVMRDSNGASRGSGFVAFKSADDASRALAEMN 468
Query: 239 GTMLGFYPVRV 249
M+G P+ V
Sbjct: 469 NKMVGNKPLYV 479
>gi|343471164|emb|CCD16349.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 369
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDE 228
A + +VI RTV++ + + + +LA L CG+ + RICG+ + + FVEF D
Sbjct: 100 AVETDVIARTVHLRFLPTGMLQSELAALCAECGEYLRVRICGNSTTTQNWIYGFVEFADR 159
Query: 229 EGARAALSLAGTML----GFYPVRV 249
GA A + +G L G P+R+
Sbjct: 160 AGAAAMMRRSGMELPNGPGKPPLRL 184
>gi|308081546|ref|NP_001183096.1| uncharacterized protein LOC100501457 [Zea mays]
gi|238009292|gb|ACR35681.1| unknown [Zea mays]
gi|414871228|tpg|DAA49785.1| TPA: hypothetical protein ZEAMMB73_160597 [Zea mays]
Length = 359
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/124 (30%), Positives = 61/124 (49%), Gaps = 23/124 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV +K S+D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRV--NKA------------SQDKKSLDVGANLFIGNLDPDV---DEKL 127
Query: 295 FFES 298
+++
Sbjct: 128 LYDT 131
>gi|126277431|ref|XP_001369327.1| PREDICTED: polyadenylate-binding protein 2-like [Monodelphis
domestica]
Length = 306
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 45/81 (55%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF+D++ R
Sbjct: 172 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKDSVRT 228
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+++L ++ ++V+P +T
Sbjct: 229 SMALDDSLFRGRQIKVIPKRT 249
>gi|294933484|ref|XP_002780736.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
gi|239890777|gb|EER12531.1| Polyadenylate-binding protein, putative [Perkinsus marinus ATCC
50983]
Length = 226
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 45/99 (45%), Gaps = 2/99 (2%)
Query: 164 MNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFA 221
M AQ E +R+VYV +D E+L F +CG + I D S FA
Sbjct: 86 MTAEQQAAQSPEQDKRSVYVGSVDYGAAPEELQEHFKSCGPIQRITIMVDKYSGHPKGFA 145
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
++EF DE + AL L TM ++VL +T + N
Sbjct: 146 YIEFGDEAAVQNALLLNDTMFRGRQLKVLQKRTNLPGYN 184
>gi|378731264|gb|EHY57723.1| nucleolin [Exophiala dermatitidis NIH/UT8656]
Length = 562
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/173 (25%), Positives = 79/173 (45%), Gaps = 16/173 (9%)
Query: 161 KRRMNCRTSNAQ--QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGD 213
++R+ +T Q +DE RRTV+V + ++ ++L F G Q+V R+ G
Sbjct: 149 RKRVKSKTPEPQLTEDERDRRTVFVQQLAARLRTKELIQFFEKAGPVKEAQIVKDRVSGR 208
Query: 214 PNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDER 271
V +VEF +EE A+ + G L P+ ++ ++ NP +
Sbjct: 209 SKGV---GYVEFKNEESVPLAIQMTGQKLLGIPIIAQLTEAEKNRQARNPE--ASTSHHN 263
Query: 272 EMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ +Y NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 264 SVPFHRLYVGNIHFSITEQDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQF 315
>gi|326427875|gb|EGD73445.1| hypothetical protein PTSG_05149 [Salpingoeca sp. ATCC 50818]
Length = 242
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 42/89 (47%), Gaps = 1/89 (1%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD 227
S ++E RR+V+V ++D +E L F CG V I P + FA+VEFTD
Sbjct: 111 SQESREEADRRSVFVQNVDYGTSEVDLQLFFKDCGPVRRITIGRGPTGQPKGFAYVEFTD 170
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAI 256
E A L ML V VL +T +
Sbjct: 171 EAAVETAKGLTNQMLKGRQVTVLNKRTNV 199
>gi|222612944|gb|EEE51076.1| hypothetical protein OsJ_31773 [Oryza sativa Japonica Group]
Length = 391
Score = 48.5 bits (114), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 238 AGTMLGFY--PVRV 249
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|194043009|ref|XP_001928191.1| PREDICTED: probable RNA-binding protein 19 [Sus scrofa]
Length = 967
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE L +F G V C I N + F FVE+ E A+ A
Sbjct: 738 TLFIKNLNFSTTEETLKGVFSKVGAVKSCSISKKKNKAGALLSMGFGFVEYKKPEQAQKA 797
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P PT + + R+ + I NI + +I+
Sbjct: 798 LKQLQGHVVDGHKLEVRISERATKPA-PTATRKKQVARKQTTSKILVRNIPFQADSREIR 856
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 857 ELF-STFGELKTVRL 870
>gi|195577213|ref|XP_002078467.1| GD23448 [Drosophila simulans]
gi|194190476|gb|EDX04052.1| GD23448 [Drosophila simulans]
Length = 608
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 75/171 (43%), Gaps = 13/171 (7%)
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
T + R+R+ + +R S ++D RTV+ + Q+V L F + G+V D
Sbjct: 223 TNSPRRRSPANGAERTTPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRD 279
Query: 208 CRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPT 262
R+ C A++EF D E AL L+G L P+ V + K + P
Sbjct: 280 VRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNATPA 339
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
F P+S +Y ++ +T+ ++ FE G++ ++L+ D +
Sbjct: 340 FQPKS----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMDTE 385
>gi|196010401|ref|XP_002115065.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
gi|190582448|gb|EDV22521.1| hypothetical protein TRIADDRAFT_28658 [Trichoplax adhaerens]
Length = 309
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 53/93 (56%), Gaps = 6/93 (6%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGA 231
+++ + + V+ + Q +T++++ +LF +CG+V+ C++ D NS L +AFV++ D A
Sbjct: 3 EKIDQSNLIVNYLPQSMTQDEIQSLFSSCGKVISCKLVRDKNSHHSLGYAFVKYEDVADA 62
Query: 232 RAAL-SLAGTMLGFYPVRV---LPSKTAIAPVN 260
A+ SL G L ++V PS AI N
Sbjct: 63 NKAISSLNGLRLQSKVIKVSYARPSSAAIKNAN 95
>gi|255647938|gb|ACU24426.1| unknown [Glycine max]
Length = 218
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 48/93 (51%), Gaps = 1/93 (1%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N S A ++E R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 79 NAAASQANKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYV 138
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF + E + AL L + L ++VLP +T +
Sbjct: 139 EFVEAEAVQEALLLNESELHGRQLKVLPKRTNV 171
>gi|294875884|ref|XP_002767464.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
gi|239869099|gb|EER00182.1| polyadenylate-binding protein 1-A, putative [Perkinsus marinus ATCC
50983]
Length = 230
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 17/160 (10%)
Query: 171 AQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF 225
+ +D +RR+ VYV ++D+ + + L F G ++ C++ P+ R F FV F
Sbjct: 3 SHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGFGFVHF 62
Query: 226 TDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNID 284
+E A AA++ L G +G V V P K + T P++ +Y +I
Sbjct: 63 ESDESAEAAIAKLNGMQIGEKTVYVAPFKKTAERNDGT--PKN-------FTNVYIKHIP 113
Query: 285 KKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+ IK F GE+ L + D + R AFV +A
Sbjct: 114 ASWNEEKIKEEF-GAFGEITSLAVQTDPK-GRRFAFVNYA 151
>gi|290999559|ref|XP_002682347.1| predicted protein [Naegleria gruberi]
gi|284095974|gb|EFC49603.1| predicted protein [Naegleria gruberi]
Length = 204
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 38/67 (56%), Gaps = 2/67 (2%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T++V ++DQQV EE L LF+ G VVD +I D N+ +AFVEF E A A+ +
Sbjct: 7 TIFVGNLDQQVDEELLWELFVQMGPVVDAKIPRDRITNTHSGYAFVEFKHEHDANYAIQV 66
Query: 238 AGTMLGF 244
+ F
Sbjct: 67 MNQIKLF 73
>gi|326513590|dbj|BAJ87814.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 644
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 46/91 (50%), Gaps = 12/91 (13%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCR-----ICGDPNSVLRFAFVEFTDEEGARA 233
RTV V+++ T+E L+T F+ CG V+ I G P AFV F D+E
Sbjct: 511 RTVLVTNVHFAATKEALSTHFMKCGTVLKLNMLTDAITGHPKGA---AFVTFADKESIGR 567
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
ALSL+GT FY + + A AP P FL
Sbjct: 568 ALSLSGT--SFYSRVLTVMRKAEAP--PGFL 594
>gi|115482332|ref|NP_001064759.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|31432465|gb|AAP54095.1| Splicing factor 3B subunit 4, putative, expressed [Oryza sativa
Japonica Group]
gi|113639368|dbj|BAF26673.1| Os10g0457000 [Oryza sativa Japonica Group]
gi|215737182|dbj|BAG96111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218184664|gb|EEC67091.1| hypothetical protein OsI_33883 [Oryza sativa Indica Group]
Length = 355
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 23/124 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV + S+D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRVNKA--------------SQDKKSLDVGANLFIGNLDPDV---DEKL 127
Query: 295 FFES 298
+++
Sbjct: 128 LYDT 131
>gi|347970878|ref|XP_003436655.1| AGAP003899-PB [Anopheles gambiae str. PEST]
gi|333466414|gb|EGK96234.1| AGAP003899-PB [Anopheles gambiae str. PEST]
Length = 280
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 66/145 (45%), Gaps = 17/145 (11%)
Query: 183 VSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV---LRFAFVEFTDEEGARAALSLAG 239
V+ + Q +TE ++ ++F G + CR+ D F FV + +EE A+ A+
Sbjct: 86 VNYLPQDMTEREMYSMFSAMGPIESCRLMRDLKQTGYSYGFGFVNYLNEEAAQRAIKC-- 143
Query: 240 TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESV 299
L YP+R K + A P+S+D +E +Y TN+ + +T+ + + F
Sbjct: 144 --LNGYPLRNKRLKVSYA------RPQSDDIKET---NLYITNLPRTITEEQLDIIFGKY 192
Query: 300 CGEVQRLRLLGDYQHSTR-IAFVEF 323
VQ+ L R +AFV F
Sbjct: 193 GTIVQKNILRDKLTGQPRGVAFVRF 217
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 44/87 (50%), Gaps = 8/87 (9%)
Query: 155 NGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDC-----R 209
NGY +R+ + Q D++ +Y++++ + +TEEQL +F G +V +
Sbjct: 145 NGYPLRNKRLKVSYARPQSDDIKETNLYITNLPRTITEEQLDIIFGKYGTIVQKNILRDK 204
Query: 210 ICGDPNSVLRFAFVEFTDEEGARAALS 236
+ G P V AFV F E A+ A+S
Sbjct: 205 LTGQPRGV---AFVRFNKREEAQEAIS 228
>gi|147840632|emb|CAN68319.1| hypothetical protein VITISV_032191 [Vitis vinifera]
Length = 312
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QVTEE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
Query: 238 AGTMLGFY--PVRV 249
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|145231104|ref|XP_001389816.1| RNA-binding protein rsd1 [Aspergillus niger CBS 513.88]
gi|134055944|emb|CAK37421.1| unnamed protein product [Aspergillus niger]
gi|350638781|gb|EHA27137.1| hypothetical protein ASPNIDRAFT_46267 [Aspergillus niger ATCC 1015]
Length = 570
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 74/169 (43%), Gaps = 14/169 (8%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSV 217
R RT +DE RRT++V + ++ ++L F G Q+V R+ G V
Sbjct: 164 RSRERTPEPTEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV 223
Query: 218 LRFAFVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCS 275
+VEF E+ A+ L G L P+ ++ ++ NP S +
Sbjct: 224 ---GYVEFKSEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE--ASSGNNHAAPF 278
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 279 HRLYVGNIHFSITESDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQF 326
>gi|391332510|ref|XP_003740677.1| PREDICTED: nucleolysin TIAR-like [Metaseiulus occidentalis]
Length = 341
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 73/163 (44%), Gaps = 24/163 (14%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
++V D+ V +QL F G++ DCR+ DP + + FV F ++ A A+ ++
Sbjct: 50 IFVGDLSSDVETQQLREAFTPFGEISDCRVVRDPQTQKSKGYGFVSFLRKQDAETAINAM 109
Query: 238 AGTMLGFYPVRV-LPSKTAIAPVN-----------PTFLPRSEDE----REMCSRTIYCT 281
G LG +R ++ + N P + P + DE + T+YC
Sbjct: 110 NGQWLGGRVIRTNWATRRPASNANNQQEGSQGNSTPKYTPLTFDEVYNQASPTNCTVYCG 169
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+ + +++ I+ F S G +Q +R+ D + AFV FA
Sbjct: 170 GLGQGLSEELIQKTFSSY-GIIQEIRVFKDKGY----AFVRFA 207
>gi|195504962|ref|XP_002099304.1| GE10834 [Drosophila yakuba]
gi|194185405|gb|EDW99016.1| GE10834 [Drosophila yakuba]
Length = 464
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|357437769|ref|XP_003589160.1| Polyadenylate-binding protein [Medicago truncatula]
gi|355478208|gb|AES59411.1| Polyadenylate-binding protein [Medicago truncatula]
Length = 647
Score = 48.1 bits (113), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 69/158 (43%), Gaps = 25/158 (15%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
++ + ++YV D++ V + QL LF GQVV R+C D L + +V FT+ + A
Sbjct: 27 NQFVTTSLYVGDLEVNVNDSQLYDLFNQVGQVVSVRVCRDLATRRSLGYGYVNFTNPQDA 86
Query: 232 RAALSLAGTMLGFYP-----VRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKK 286
AL + L F P +RV+ S R R+ + I+ N+DK
Sbjct: 87 ARALDV----LNFTPMNNKSIRVMYSH------------RDPSSRKSGTANIFIKNLDKT 130
Query: 287 VTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
+ + F S G++ ++ D S FV+F
Sbjct: 131 IDHKALHDTFSSF-GQIMSCKIATDGSGQSKGYGFVQF 167
Score = 44.3 bits (103), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D +T+E+L +F G + +I DPN V R + FV F T EE +RA +
Sbjct: 317 LYLKNLDDSITDEKLKEMFSEFGTITSYKIMRDPNGVSRGSGFVAFSTPEEASRALGEMN 376
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 377 GKMIVSKPLYV 387
>gi|84468322|dbj|BAE71244.1| putative DNA binding protein [Trifolium pratense]
Length = 402
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 85/198 (42%), Gaps = 28/198 (14%)
Query: 140 GTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLF 199
G NG + R +S G+R +++QD+ T++V D+ VT+ L F
Sbjct: 120 GAIMPNGGQSYRLNWATFSAGER-------SSRQDDGPDHTIFVGDLAADVTDYLLQETF 172
Query: 200 ------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLPS 252
+ +VV R+ G + FV F DE E RA + G + P+R+ P+
Sbjct: 173 RARYNSVKGAKVVIDRLTGRSKG---YGFVRFADEGEQMRAMTEMQGVLCSTRPMRIGPA 229
Query: 253 ------KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
T A + + P + E + + TI+ N+D VT ++ F S GE+ +
Sbjct: 230 TNKNPAATTQAKASYSNTPGGQSENDPNNTTIFVGNLDPNVTDDHLRQVF-SQYGELVHV 288
Query: 307 RLLGDYQHSTRIAFVEFA 324
++ R FV+F+
Sbjct: 289 KI----PSGKRCGFVQFS 302
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 5/76 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LA 238
T++V ++D VT++ L +F G++V +I S R FV+F+D A A+ L
Sbjct: 260 TIFVGNLDPNVTDDHLRQVFSQYGELVHVKIP----SGKRCGFVQFSDRSSAEEAIRVLN 315
Query: 239 GTMLGFYPVRVLPSKT 254
GT+LG VR+ +T
Sbjct: 316 GTLLGGQNVRLSWGRT 331
>gi|393218535|gb|EJD04023.1| hypothetical protein FOMMEDRAFT_133373 [Fomitiporia mediterranea
MF3/22]
Length = 422
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 72/165 (43%), Gaps = 23/165 (13%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFT 226
S A++D V+V D+ +V + LA F G + D R+ D NS + F+ F
Sbjct: 94 STAKEDTSGHFHVFVGDLSPEVNDAVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFR 153
Query: 227 DEEGARAALS-LAGTMLGFYPVRV-----------LPSKT----AIAPVNPTFLPRSED- 269
D+ A A++ + G LG +RV P T A AP+N P S +
Sbjct: 154 DKTDAEQAIATMNGEWLGSRAIRVNWANQKTQGAPAPRPTGAGGAPAPINFQGGPLSYET 213
Query: 270 ---EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+ + T+Y N+ TQ D+ F+S+ G + +R+ D
Sbjct: 214 VVQQTPAYNTTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD 257
>gi|340057933|emb|CCC52286.1| putative RNA-binding protein [Trypanosoma vivax Y486]
Length = 371
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
Y+ +ID+ VT E L +F CG +VDC + G R+ F++F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGTIVDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFT 71
Query: 242 LGFYPVRVLPSK 253
L ++V SK
Sbjct: 72 LAGRKIKVGISK 83
>gi|356536490|ref|XP_003536770.1| PREDICTED: nucleolar protein 13-like [Glycine max]
Length = 394
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 62/135 (45%), Gaps = 8/135 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
+YV I TE+ + + F +CG + VDC + A + F E A+ AL+L
Sbjct: 151 IYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALD 210
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G +G +++ P K A F P + E +R IY N+ +T+ +++ FF +
Sbjct: 211 GADMGGLFLKIQPYKATRANKASDFAP---EILEGYNR-IYVGNLSWDITEEELRKFFNN 266
Query: 299 VCGEVQRLRLLGDYQ 313
E+ LR D +
Sbjct: 267 --SEITSLRFGMDKE 279
>gi|296804902|ref|XP_002843299.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
gi|238845901|gb|EEQ35563.1| U4/U6 snRNA-associated-splicing factor PRP24 [Arthroderma otae CBS
113480]
Length = 1278
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 68/151 (45%), Gaps = 18/151 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TV+V++ E + LF +CG++ + R N+ RF +V+FT A AA L
Sbjct: 877 TVFVTNFPPTADENYIRELFHSCGEIAEVRFPSLKYNTHRRFCYVQFTSSSDAYAATGLN 936
Query: 239 GTMLGFYPVRVL----PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
LG V+ PS+ + RS E R IY N+ K T+GD+
Sbjct: 937 EKDLGGNLRLVVKISDPSQRQV---------RSGAYEE--GREIYVCNLPYKTTEGDLVE 985
Query: 295 FFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
F + G+V+ +R+ TR AFV FA
Sbjct: 986 LF-TAYGDVESVRIPTKVNGETRGFAFVTFA 1015
>gi|440797930|gb|ELR19004.1| polyadenylate-binding protein family protein [Acanthamoeba
castellanii str. Neff]
Length = 462
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 65/142 (45%), Gaps = 7/142 (4%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA-RAALSLA 238
+Y+ ++ + TEE L F G V + DP + R FAFV F D E A RA L
Sbjct: 191 IYIKNLGEAYTEEDLKRDFGAFGTVQSAVLMKDPRDIGRQFAFVNFEDHEAAHRATEELN 250
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTI--YCTNIDKKVTQGDI-KLF 295
G LG V V + +FL + +ER + I Y N+D V ++ KLF
Sbjct: 251 GRKLGDKEVYV--GRAQKKSERESFLRKLREERAQKYQGINLYIKNLDDTVNDEELHKLF 308
Query: 296 FESVCGEVQRLRLLGDYQHSTR 317
G++ +++ D + ++R
Sbjct: 309 SALPFGQITSCKVMSDDKGNSR 330
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 236
++YV D++ VTE L +F G V R+C D L +A+V F + A AL +
Sbjct: 11 SLYVGDLNPTVTEALLFEIFKAVGPVASIRVCRDAVTRRSLGYAYVNFHNVVDAERALDT 70
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L T++ P R++ S R R+ I+ N+DK +
Sbjct: 71 LNYTLIKGRPCRIMWSH------------RDPSIRKSGQGNIFIKNLDKSI 109
>gi|10086463|gb|AAG12523.1|AC015446_4 Similar to Polyadenylate-Binding Proteins 2 and 5 [Arabidopsis
thaliana]
Length = 338
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 101 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 160
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 161 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 209
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F GE+ ++ D + S R FV F
Sbjct: 210 FGEF-GEITSAVVMKDGEGKSRRFGFVNF 237
>gi|167533335|ref|XP_001748347.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773159|gb|EDQ86802.1| predicted protein [Monosiga brevicollis MX1]
Length = 406
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 70/154 (45%), Gaps = 26/154 (16%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV +D +V EE + LFL G VV + D S + FVEF E+ A AL +
Sbjct: 14 TVYVGGLDDKVDEELVWELFLQAGPVVSVHMPKDRVSGAHQSYGFVEFLGEDDAEYALKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
M+ Y P+RV +K+A S + +Y N+ +V D KL
Sbjct: 74 L-NMINVYGKPIRV--NKSA-----------SHSKHMEVGANLYIGNLAPEV---DEKLL 116
Query: 296 FESVCG---EVQRLRLLGDYQ--HSTRIAFVEFA 324
F++ +Q +++ D + HS AF+ +A
Sbjct: 117 FDTFSAFGVILQHPKVMRDLETGHSKGFAFINYA 150
>gi|156097476|ref|XP_001614771.1| RNA-binding protein [Plasmodium vivax Sal-1]
gi|148803645|gb|EDL45044.1| RNA-binding protein, putative [Plasmodium vivax]
Length = 202
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/97 (27%), Positives = 48/97 (49%), Gaps = 3/97 (3%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEE 229
+Q+E+ R+++V ++D E+L +LF CG + I + N+ +A++EF D
Sbjct: 64 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 123
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVN-PTFLP 265
R ALSL+ + ++V + I N P P
Sbjct: 124 SVRTALSLSESFFKKRQIKVCSKRRNIPGFNRPKISP 160
>gi|350408506|ref|XP_003488427.1| PREDICTED: polyadenylate-binding protein 1-like isoform 2 [Bombus
impatiens]
Length = 621
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML + K + F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML------LNGKKVYVG----KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 192 TNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ M+ P+R++ S+ R R+ ++ N+DK +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI 110
>gi|194910009|ref|XP_001982056.1| GG12380 [Drosophila erecta]
gi|190656694|gb|EDV53926.1| GG12380 [Drosophila erecta]
Length = 464
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGTMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|350408504|ref|XP_003488426.1| PREDICTED: polyadenylate-binding protein 1-like isoform 1 [Bombus
impatiens]
Length = 630
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML +V K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML-LNGKKVYVGK---------FIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 192 TNVYVKNFGEDMTDDKLKDMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ M+ P+R++ S+ R R+ ++ N+DK +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI 110
>gi|340719924|ref|XP_003398394.1| PREDICTED: polyadenylate-binding protein 1-like isoform 4 [Bombus
terrestris]
Length = 612
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 71/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + V + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGVSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML + K + F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIDRVNGML------LNGKKVYVG----KFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 192 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 239
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 49/111 (44%), Gaps = 15/111 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ +TE L F + G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDITEAMLFEKFSSAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ M+ P+R++ S+ R R+ ++ N+DK +
Sbjct: 72 MNFDMIKGRPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKNI 110
>gi|194758325|ref|XP_001961412.1| GF14957 [Drosophila ananassae]
gi|190615109|gb|EDV30633.1| GF14957 [Drosophila ananassae]
Length = 594
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 237 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLILCNKTKRFKGIAYIEFEDPESVALALG 296
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+S +Y ++ +T+ ++
Sbjct: 297 LSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQPKS----HTGPMRLYVGSLHFNITEDMLR 352
Query: 294 LFFESVCGEVQRLRLLGDYQ 313
FE G++ ++L+ D +
Sbjct: 353 GIFEPF-GKIDAIQLIMDTE 371
>gi|91805911|gb|ABE65684.1| polyadenylate-binding protein [Arabidopsis thaliana]
Length = 267
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 68/149 (45%), Gaps = 15/149 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
R V+V ++D+ + +QL +F G+V+ C++ D + V + + FV+F + A +
Sbjct: 30 RGNVFVKNLDESIDNKQLCDMFSAFGKVLSCKVARDASGVSKGYGFVQFYSDLSVYTACN 89
Query: 237 LA-GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
GT++ + V P F+ R + ++ +Y N+ + T D+K
Sbjct: 90 FHNGTLIRNQHIHVCP-----------FVSRGQWDKSRVFTNVYVKNLVETATDADLKRL 138
Query: 296 FESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F GE+ ++ D + S R FV F
Sbjct: 139 FGEF-GEITSAVVMKDGEGKSRRFGFVNF 166
>gi|118372171|ref|XP_001019282.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|89301049|gb|EAR99037.1| nucleolar phosphoprotein [Tetrahymena thermophila SB210]
Length = 320
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
+T++V ++ +E L F +CG+VV+ RI F VEF + G AL +A
Sbjct: 234 KTIFVGNLSFVTNKETLKKFFASCGKVVNARIAEAEGKSRGFGHVEFEERSGVENALKMA 293
Query: 239 GTMLGFYPVRV 249
G + P+RV
Sbjct: 294 GEQIDGRPIRV 304
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 51/123 (41%), Gaps = 9/123 (7%)
Query: 202 CGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
CG V + + + AFV F EEG A+ L+ + F ++ KT
Sbjct: 166 CGSVTRVNLLKNEQGCSKGVAFVSFETEEGCNKAVELSDSE--FMGRQIFIEKTKPKIER 223
Query: 261 PTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAF 320
P LP +D S+TI+ N+ + +K FF S CG+V R+ S
Sbjct: 224 PAQLPADQD-----SKTIFVGNLSFVTNKETLKKFFAS-CGKVVNARIAEAEGKSRGFGH 277
Query: 321 VEF 323
VEF
Sbjct: 278 VEF 280
>gi|358009812|pdb|3UCG|A Chain A, Crystal Structure Of A Rna Binding Domain Of Hypothetical
Polyadenylate-Binding Protein (Pabpn1) From Homo Sapiens
At 1.95 A Resolution
Length = 89
Score = 48.1 bits (113), Expect = 0.006, Method: Composition-based stats.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEE 229
E R++YV ++D T E+L F CG V + C + G P FA++EF+D+E
Sbjct: 3 EADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKE 59
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
R +L+L ++ ++V+P +T
Sbjct: 60 SVRTSLALDESLFRGRQIKVIPKRT 84
>gi|356548313|ref|XP_003542547.1| PREDICTED: probable polyadenylate-binding protein At2g36660-like
[Glycine max]
Length = 495
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/137 (24%), Positives = 65/137 (47%), Gaps = 7/137 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+Y+ ++D +TE L F + G+++ I D N + + FAFV + + + A+ A+ ++
Sbjct: 193 LYIKNLDSDITEALLQEKFSSFGKIISLAISKDDNGLSKGFAFVNYENPDDAKKAMEAMN 252
Query: 239 GTMLG---FYPVRVLPSKTAIAPVNPTF-LPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
G G Y R ++ F R E + + +Y NID VT +++
Sbjct: 253 GLQFGSKYLYVARAQKKAEREQILHRQFEEKRKEQILKYQASNLYVKNIDDDVTDKELRD 312
Query: 295 FFESVCGEVQRLRLLGD 311
F S CG + ++++ D
Sbjct: 313 LFSS-CGTITSVKVMRD 328
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+YV +ID VT+++L LF +CG + ++ D + + F FV F++ EE +A +S
Sbjct: 296 LYVKNIDDDVTDKELRDLFSSCGTITSVKVMRDDKGISKGFGFVCFSNPEEANKAVMSFN 355
Query: 239 GTMLGFYPVRV 249
G P+ +
Sbjct: 356 GCTFHRKPLYI 366
>gi|156363387|ref|XP_001626026.1| predicted protein [Nematostella vectensis]
gi|156212886|gb|EDO33926.1| predicted protein [Nematostella vectensis]
Length = 468
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/154 (26%), Positives = 70/154 (45%), Gaps = 8/154 (5%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
+E +RTV+ + + + L F GQV D RI D NS A++EFTD+
Sbjct: 114 EEKDQRTVFCMQLARNIRPRDLEEFFSKVGQVSDVRIISDRNSRRSKGIAYIEFTDKSAV 173
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A+ L+G L P+ V+ ++ A N ++ + +Y ++ +T+
Sbjct: 174 PLAIGLSGQKLLGAPIMVMLTQ---AEKNRLAAEAERLKQPLGPTRLYVGSLHFNITEAM 230
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
+K FE G V ++L+ D + S FV+F
Sbjct: 231 VKAVFEPF-GTVDSVQLIYDSETNRSKGYGFVQF 263
>gi|393216848|gb|EJD02338.1| polyadenylate binding protein [Fomitiporia mediterranea MF3/22]
Length = 701
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 29/181 (16%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
YS K R CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++
Sbjct: 119 YSLIKNRA-CRIMWSQRDPALRKTGQGNIFIKNLDEQIDHKALHDTFAAFGNVLSCKVAT 177
Query: 213 DPNSVLR-FAFVEFTDEEGARAALSLAGTML--------GFYPVRVLPSKTAIAPVNPTF 263
D N R F FV + E A A+ ML G Y + K A +
Sbjct: 178 DENGRSRGFGFVHYDTAEAADTAIKAVNGMLLNDKKVFVGHY----ISKKERQAHI---- 229
Query: 264 LPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVE 322
DE++ +Y N+D +VT + F GEV + D + ++ FV
Sbjct: 230 -----DEQKSQFTNLYVKNLDTEVTDDEFNDMFAKF-GEVTSAVVQKDEEGKSKGFGFVN 283
Query: 323 F 323
F
Sbjct: 284 F 284
>gi|297735183|emb|CBI17545.3| unnamed protein product [Vitis vinifera]
Length = 238
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QVTEE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQVTEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 85
Query: 238 AGTMLGFY--PVRV 249
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|221119399|ref|XP_002162311.1| PREDICTED: uncharacterized protein LOC100198013 [Hydra
magnipapillata]
Length = 273
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSL 237
TV+VS+I+ +VTEE L LFL G + + I D +S FAFV ++D + L
Sbjct: 11 TVFVSNIESRVTEELLWELFLQAGPLKNVHIPIDRSSGKSKTFAFVTYSDISAVAFSCEL 70
Query: 238 AGTMLGF-YPVRVLPSKTAIAPV 259
T+ F P+ PSK APV
Sbjct: 71 FNTLKLFNRPIYCKPSKDGKAPV 93
>gi|242039427|ref|XP_002467108.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
gi|241920962|gb|EER94106.1| hypothetical protein SORBIDRAFT_01g019710 [Sorghum bicolor]
Length = 664
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 21/171 (12%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSL 237
+T++V ++ + EQ+ F G+VVD R+ D S + VEF E A+ AL
Sbjct: 413 KTIFVGNLAYSIEREQVKEFFEEAGEVVDIRLSTFDDGSFKGYGHVEFATAEAAQKALEF 472
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDE----REMCSR---TIYCTNIDKKVTQG 290
G L +R+ +A + P S + R+ R T++ D V +
Sbjct: 473 GGRDLMGRSLRI-----DLAVERGAYTPNSGKDNGSFRKSAQRSGNTVFIKGFDTSVGED 527
Query: 291 DIKLFFES---VCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSEPFSWHACF 336
I+ E CG++ R+ + DY S +A+++F +P S + +
Sbjct: 528 QIRSALEEHFRSCGDITRISIPKDYDTGASKGMAYMDF---KDPDSLNKAY 575
>gi|71993551|ref|NP_500666.2| Protein T08B6.5 [Caenorhabditis elegans]
gi|373220496|emb|CCD73994.1| Protein T08B6.5 [Caenorhabditis elegans]
Length = 177
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 229
+Q++ R+VYV ++D + T ++ F CG+V I D + + FAFVEF E
Sbjct: 39 EQEKTDARSVYVGNVDWKSTVSEIEEHFAVCGKVARVTIPKDKFTGYQKNFAFVEFQKLE 98
Query: 230 GARAALSLAGTML 242
+ AL L+GTM
Sbjct: 99 SVQLALVLSGTMF 111
Score = 41.2 bits (95), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 25/75 (33%), Positives = 42/75 (56%), Gaps = 7/75 (9%)
Query: 253 KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD- 311
K A++ P +E++ + +R++Y N+D K T +I+ F +VCG+V R+ + D
Sbjct: 23 KQALSASKKYMAPTAEEQEKTDARSVYVGNVDWKSTVSEIEEHF-AVCGKVARVTIPKDK 81
Query: 312 ---YQHSTRIAFVEF 323
YQ + AFVEF
Sbjct: 82 FTGYQKN--FAFVEF 94
>gi|145491019|ref|XP_001431509.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|145522722|ref|XP_001447205.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398614|emb|CAK64111.1| unnamed protein product [Paramecium tetraurelia]
gi|124414705|emb|CAK79808.1| unnamed protein product [Paramecium tetraurelia]
Length = 260
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 43/74 (58%), Gaps = 5/74 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+Y+ ++DQ+VT++ + LF+ CG VV+ I D S + FVEF EE A A+ +
Sbjct: 20 TIYIGNLDQKVTDDIVWELFIQCGPVVNVHIPKDKISGEHQGYGFVEFKSEEDADYAIKI 79
Query: 238 AGTMLGFY--PVRV 249
M+ Y P++V
Sbjct: 80 M-HMIKLYGKPIKV 92
>gi|242039481|ref|XP_002467135.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
gi|241920989|gb|EER94133.1| hypothetical protein SORBIDRAFT_01g020190 [Sorghum bicolor]
Length = 355
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TTYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 238 AGTMLGFY--PVRV 249
M+ Y P+RV
Sbjct: 86 L-NMIKLYGKPIRV 98
>gi|393227010|gb|EJD34711.1| hypothetical protein AURDEDRAFT_109252 [Auricularia delicata
TFB-10046 SS5]
Length = 1014
Score = 47.8 bits (112), Expect = 0.007, Method: Composition-based stats.
Identities = 43/160 (26%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
+ T+YV++ ++ + + LF G ++D R S RF +V+FT A A+LS
Sbjct: 661 KSTLYVTNFPERTDDTAMRDLFGQFGVLLDVRWPSKKFKSTRRFCYVQFTSPAAAEASLS 720
Query: 237 LAGTMLGFYPVRVLPS-KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L G L P K ++ +PT + + + R +Y + + + +++
Sbjct: 721 LHGRELE-------PGMKLSVLMSDPT-RKKERTDADANERELYIAGLSRFTKREELQAL 772
Query: 296 FESVCGEVQRLRL-LGDYQHSTRIAFVEFAMVSEPFSWHA 334
F+ G ++ +R+ L D H AFVEFA EP S H+
Sbjct: 773 FQQF-GTIKDIRISLDDNGHCKGFAFVEFA---EPRSAHS 808
Score = 42.0 bits (97), Expect = 0.39, Method: Composition-based stats.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 11/149 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R +Y++ + + E+L LF G + D RI D N + FAFVEF + A + LS
Sbjct: 753 RELYIAGLSRFTKREELQALFQQFGTIKDIRISLDDNGHCKGFAFVEFAEPRSAHSGLSA 812
Query: 238 AGTMLGFYPVRVL---PSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L + V P A + T L R + R SR++ + +G ++
Sbjct: 813 NNFELKSRRIAVTLADPRVKAKHKHDATGLGRKSNLR---SRSVRVRGLPSGTQEGLLQQ 869
Query: 295 FFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
FE V+R+ L ST A VEF
Sbjct: 870 AFEKEFEGVKRVELF----VSTNEAVVEF 894
>gi|168018573|ref|XP_001761820.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686875|gb|EDQ73261.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 439
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/116 (26%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGAR 232
+ + ++YV D++ V+E QL +F GQVV R+C D L +++V + + + A
Sbjct: 20 QFVSTSLYVGDLEPNVSEAQLYEMFSQVGQVVSIRVCRDLITRRSLGYSYVNYNNAQDAT 79
Query: 233 AALSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
AL L T + P+R++ F R R+ + I+ N+DK +
Sbjct: 80 RALELLNFTGVNGKPIRIM------------FSHRDPSIRKSGTANIFIKNLDKSI 123
>gi|452845447|gb|EME47380.1| hypothetical protein DOTSEDRAFT_69347 [Dothistroma septosporum
NZE10]
Length = 607
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 69/161 (42%), Gaps = 20/161 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
DE RRTV+V + ++ +L F G VVD +I D S +VEF +EE
Sbjct: 216 DERDRRTVFVQQLAARLRSRELKEFFEQAGPVVDAQIVKDRVSGRSKGVGYVEFKEEESV 275
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIYCTNI 283
+ A++L G L P+ IA + R E + +Y NI
Sbjct: 276 QKAIALTGQKLLGIPI--------IAQLTEAEKNRQARNTEGTATQSNGIPFHRLYVGNI 327
Query: 284 DKKVTQGDIKLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
+T+ D+K FE GE++ ++L + S FV+F
Sbjct: 328 HFSITEDDLKNVFEPF-GELEFVQLQKEEAGRSKGYGFVQF 367
>gi|15220241|ref|NP_175181.1| RNA-binding protein 47C' [Arabidopsis thaliana]
gi|75337808|sp|Q9SX80.1|R47CP_ARATH RecName: Full=Polyadenylate-binding protein RBP47C';
Short=Poly(A)-binding protein RBP47C'; AltName:
Full=RNA-binding protein 47C'; Short=AtRBP47C prime;
Short=AtRBP47C'
gi|5668811|gb|AAD46037.1|AC007519_22 Contains 3 PF|00076 RNA recognition motif domains. EST gb|T20424
comes from this gene [Arabidopsis thaliana]
gi|110743035|dbj|BAE99410.1| hypothetical protein [Arabidopsis thaliana]
gi|124301030|gb|ABN04767.1| At1g47500 [Arabidopsis thaliana]
gi|332194057|gb|AEE32178.1| RNA-binding protein 47C' [Arabidopsis thaliana]
Length = 434
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 48/106 (45%), Gaps = 15/106 (14%)
Query: 150 TRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR 209
T RK NGY Q M + + I T++V +D VT+E L F G++V +
Sbjct: 277 TPRKTNGYQQQGGYMPSGAFTRSEGDTINTTIFVGGLDSSVTDEDLKQPFSEFGEIVSVK 336
Query: 210 I-----CGDPNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRV 249
I CG FV+F + A AL L GT++G VR+
Sbjct: 337 IPVGKGCG---------FVQFVNRPNAEEALEKLNGTVIGKQTVRL 373
>gi|356576101|ref|XP_003556172.1| PREDICTED: polyadenylate-binding protein 5-like isoform 1 [Glycine
max]
Length = 652
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D++ V EEQL LF Q+ R+C D S L +A+V F + + A A+ L
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F P+ P + + +P+ R+ ++ N+D +
Sbjct: 96 ----LNFTPLNGKPIRIMFSQRDPSI-------RKSGHGNVFIKNLDTSI 134
Score = 42.7 bits (99), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D IR++ V++ ++D + + L F G V+ C++ D + + +
Sbjct: 106 IRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGY 165
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A+ A+ L G ++ V V F+ R E E+ S
Sbjct: 166 GFVQFDNEEAAQNAIKRLNGMLINDKQVYV-----------GLFIRRQEREQTNGSPKFT 214
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N+ + T D+K F G + ++ D +R FV F
Sbjct: 215 NVYVKNLSETYTDEDLKKLF-GPYGTITSATVMKDVNGKSRCFGFVNF 261
Score = 38.5 bits (88), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D ++E+L LF G + C++ D N + + FV F T EE ++A +
Sbjct: 320 LYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMN 379
Query: 239 GTMLGFYPVRV 249
G ++G P+ V
Sbjct: 380 GKLIGRKPLYV 390
>gi|260943169|ref|XP_002615883.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
gi|238851173|gb|EEQ40637.1| hypothetical protein CLUG_04765 [Clavispora lusitaniae ATCC 42720]
Length = 385
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 33/62 (53%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E+ R+ +YV + + + E+ L F G V +I D N +AFVEF DE GA A
Sbjct: 40 EISRKVLYVGGLPKSINEDALNEKFSASGPVFSVKILNDKNKQGFNYAFVEFVDEAGAAA 99
Query: 234 AL 235
AL
Sbjct: 100 AL 101
>gi|356510461|ref|XP_003523956.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
gi|83853808|gb|ABC47841.1| poly(A)-binding protein [Glycine max]
Length = 630
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 172 QQDEVIRRTV--------YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-F 222
Q +++ + TV Y+ ++D V +E+L LF G + C++ DPN + R + F
Sbjct: 291 QHEQITKETVDKYHGTNLYIKNLDDSVGDEELMELFSEFGTITSCKVMRDPNGISRGSGF 350
Query: 223 VEFTDEEGARAAL-SLAGTMLGFYPVRV 249
V F+ EGA AL + G M+ P+ V
Sbjct: 351 VSFSIAEGATRALGEMNGKMVAGKPLYV 378
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 50/112 (44%), Gaps = 17/112 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ V + QL LF QVV RIC D L + +V F++ A A+ +
Sbjct: 25 SLYVGDLHHDVNDPQLYDLFNQVAQVVSVRICRDVATQQSLGYGYVNFSNAHDAAKAIDV 84
Query: 238 AGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F P+ +++ +I R R+ + ++ N+DK +
Sbjct: 85 ----LNFTPLNGKIIRIMYSI---------RDPSARKSGAANVFIKNLDKAI 123
>gi|345561329|gb|EGX44424.1| hypothetical protein AOL_s00193g6 [Arthrobotrys oligospora ATCC
24927]
Length = 744
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/171 (23%), Positives = 73/171 (42%), Gaps = 23/171 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 122 CRIMWSQRDPALRKTGHGNVFIKNLDIAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 181
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-----DEREMCS 275
FV + E A A+ ML + K + +P+ E DE +
Sbjct: 182 GFVHYETAEAATNAIKHVNGML------LNEKKVYVG----HHIPKKERQSKFDEMKANF 231
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL--GDYQHSTRIAFVEFA 324
+Y NID +V+ + + FE+ G++ L GD S FV F+
Sbjct: 232 TNVYVKNIDPEVSDDEFRTLFENF-GQITSASLARDGDSGTSRGFGFVNFS 281
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 52 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALEE 111
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 112 LNYTLIKGRPCRIMWSQ 128
Score = 37.7 bits (86), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%), Gaps = 2/51 (3%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRIC--GDPNSVLRFAFVEFTDEE 229
VYV +ID +V++++ TLF GQ+ + GD + F FV F+ E
Sbjct: 234 VYVKNIDPEVSDDEFRTLFENFGQITSASLARDGDSGTSRGFGFVNFSSHE 284
>gi|195471585|ref|XP_002088083.1| GE14328 [Drosophila yakuba]
gi|194174184|gb|EDW87795.1| GE14328 [Drosophila yakuba]
Length = 590
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
T + R+R+ + R S ++D RTV+ + Q+V L F + G+V D
Sbjct: 205 TNSPRRRSPANGADRTPPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRD 261
Query: 208 CRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPT 262
R+ C A++EF D E AL L+G L P+ V + K + P
Sbjct: 262 VRLITCNKTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPA 321
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
F P+S +Y ++ +T+ ++ FE G++ ++L+ D +
Sbjct: 322 FQPKS----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMDTE 367
>gi|396492663|ref|XP_003843853.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
gi|312220433|emb|CBY00374.1| hypothetical protein LEMA_P015040.1 [Leptosphaeria maculans JN3]
Length = 747
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF- 225
+ AQQ ++YV ++D VTE L LF + GQV R+C D L +A+V +
Sbjct: 37 TTAQQAHQNSASLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYN 96
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSK 253
+ E+G +A L T++ P R++ S+
Sbjct: 97 SSEDGEKALEELNYTVIKGKPCRIMWSQ 124
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 118 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDEHGNSKGY 177
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ + G +L V V +P K ++ +E +
Sbjct: 178 GFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKF---------EEMKANFT 228
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
IY NID VT + + FE G++ + D Q +R FV +
Sbjct: 229 NIYVKNIDLDVTDDEFRDLFEK-HGDITSASIARDDQGKSRGFGFVNY 275
>gi|195434196|ref|XP_002065089.1| GK15272 [Drosophila willistoni]
gi|194161174|gb|EDW76075.1| GK15272 [Drosophila willistoni]
Length = 612
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 44/168 (26%), Positives = 72/168 (42%), Gaps = 14/168 (8%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RR NG G R S ++D RTV+ + Q+V L F + G+V D R+
Sbjct: 231 RRSPNG-GAGDRTPPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRM 286
Query: 211 --CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLP 265
C A++EF D E AL L+G L P+ V + K + P F P
Sbjct: 287 ITCNKTKRFKGIAYIEFEDPESVSLALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPAFQP 346
Query: 266 RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
+S +Y ++ +T+ ++ FE G++ ++L+ D +
Sbjct: 347 KS----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDVIQLIMDTE 389
>gi|19920866|ref|NP_609095.1| CG11266, isoform B [Drosophila melanogaster]
gi|24582412|ref|NP_723243.1| CG11266, isoform A [Drosophila melanogaster]
gi|7297213|gb|AAF52478.1| CG11266, isoform A [Drosophila melanogaster]
gi|15292031|gb|AAK93284.1| LD35730p [Drosophila melanogaster]
gi|22945834|gb|AAN10614.1| CG11266, isoform B [Drosophila melanogaster]
gi|220946034|gb|ACL85560.1| CG11266-PA [synthetic construct]
gi|220955788|gb|ACL90437.1| CG11266-PA [synthetic construct]
Length = 594
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
T + R+R+ + R S ++D RTV+ + Q+V L F + G+V D
Sbjct: 209 TNSPRRRSPPNGADRTTPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRD 265
Query: 208 CRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPT 262
R+ C A++EF D E AL L+G L P+ V + K + P
Sbjct: 266 VRLITCNKTKRFKGIAYIEFDDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPA 325
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
F P+S +Y ++ +T+ ++ FE G++ ++L+ D +
Sbjct: 326 FQPKS----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMDTE 371
>gi|194862772|ref|XP_001970115.1| GG10454 [Drosophila erecta]
gi|190661982|gb|EDV59174.1| GG10454 [Drosophila erecta]
Length = 593
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 42/171 (24%), Positives = 74/171 (43%), Gaps = 13/171 (7%)
Query: 148 TTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVD 207
T + R+R+ + R S ++D RTV+ + Q+V L F + G+V D
Sbjct: 208 TNSPRRRSPANGADRTPPTELSPEERDA---RTVFCIQLSQRVRARDLEEFFSSVGKVRD 264
Query: 208 CRI--CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPT 262
R+ C A++EF D E AL L+G L P+ V + K + P
Sbjct: 265 VRLITCNKTKRFKGIAYIEFEDPESVALALGLSGQRLLGVPIMVQHTQAEKNRLQNAAPA 324
Query: 263 FLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
F P+S +Y ++ +T+ ++ FE G++ ++L+ D +
Sbjct: 325 FQPKS----HTGPMRLYVGSLHFNITEDMLRGIFEPF-GKIDAIQLIMDTE 370
>gi|68076033|ref|XP_679936.1| RNA-binding protein [Plasmodium berghei strain ANKA]
gi|56500788|emb|CAH95197.1| RNA-binding protein, putative [Plasmodium berghei]
Length = 172
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEE 229
+Q+E+ R+++V ++D E+L +LF CG + I + N+ +A++EF D
Sbjct: 59 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGIINRVTILVNKNTGHSKGYAYIEFADPS 118
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
R ALSL+ + ++V + I N
Sbjct: 119 SVRTALSLSESFFKKRQIKVCSKRRNIPGFN 149
>gi|313228854|emb|CBY18005.1| unnamed protein product [Oikopleura dioica]
Length = 314
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 48/96 (50%), Gaps = 3/96 (3%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV---LRFAFVEFTDE 228
+QDE RT+YV +++ + TE+QL F G + + D +++ F F+ F +
Sbjct: 217 RQDEEDARTIYVRNLNPKTTEQQLRDHFSVFGAIKRIVLPQDAHAIGSNRGFTFITFAGK 276
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFL 264
E A SL GT+L ++V+P + + P +
Sbjct: 277 EPVEVACSLDGTLLHERSIKVVPKTNMMGKIRPQHI 312
>gi|423076693|ref|ZP_17065401.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
gi|361852256|gb|EHL04522.1| hypothetical protein HMPREF0322_04849 [Desulfitobacterium hafniense
DP7]
Length = 112
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 43/99 (43%), Gaps = 2/99 (2%)
Query: 153 KRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
K YS G SN Q+ T+YV ++ T E L + F GQV+ RI
Sbjct: 5 KSGKYSSGAFAHTKFESNKQEVTANMATLYVGNLPWNTTSEDLNSFFGQYGQVISSRIIT 64
Query: 213 DPNSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
D + F FVE DE+ AR A L G G P+ V
Sbjct: 65 DRETGRSRGFGFVEVEDEDAARMAEDLNGKDFGGRPLTV 103
>gi|167385948|ref|XP_001737551.1| 29 kDa ribonucleoprotein A, chloroplast precursor [Entamoeba dispar
SAW760]
gi|165899593|gb|EDR26160.1| 29 kDa ribonucleoprotein A, chloroplast precursor, putative
[Entamoeba dispar SAW760]
Length = 302
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 73/151 (48%), Gaps = 4/151 (2%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
+V++ + + + E ++ F+TCG++ + PN + F+EF D++GA A S
Sbjct: 15 SVFIGKLPKSMKENEIREKFITCGRISRMMMQYYPNGQSKGCCFIEFEDKKGAERACSRD 74
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G+++ +RV ++ VN LP+ ++ S I+ + T+ + F +
Sbjct: 75 GSIIDKQYIRVNMAEKKPKKVNYKHLPKVTQKKMNNSYCIFVGKVSAITTESTLVKIF-A 133
Query: 299 VCGEVQRLRLLGDYQHSTR--IAFVEFAMVS 327
CG+V R+ + + R A VEFA ++
Sbjct: 134 KCGKVLRVTIPIWRNTNKRRGFAIVEFASLA 164
>gi|356555656|ref|XP_003546146.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 411
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 94/206 (45%), Gaps = 32/206 (15%)
Query: 135 IMHT-DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEE 193
I+ T +G NG + R +S G+R ++QD+ T++V D+ VT+
Sbjct: 124 ILQTYNGAIMPNGGQSFRLNWATFSAGER--------SRQDDSPDYTIFVGDLAADVTDY 175
Query: 194 QLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYP 246
L F + +VV R+ G + FV F++E E RA + G + P
Sbjct: 176 LLQETFRARYNSVKGAKVVIDRLTGRTKG---YGFVRFSEESEQMRAMTEMQGVLCSTRP 232
Query: 247 VRVLPS--KTAIAPVNP--TFL---PR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
+R+ P+ KT P ++L P+ S++E + + TI+ N+D VT ++ F S
Sbjct: 233 MRIGPASNKTPATQSQPKASYLNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVF-S 291
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFA 324
GE+ +++ R FV+FA
Sbjct: 292 QYGELVHVKIPA----GKRCGFVQFA 313
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LA 238
T++V ++D VT++ L +F G++V +I R FV+F D A AL L
Sbjct: 271 TIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAG----KRCGFVQFADRSCAEEALRVLN 326
Query: 239 GTMLGFYPVRV 249
GT+LG VR+
Sbjct: 327 GTLLGGQNVRL 337
>gi|169767236|ref|XP_001818089.1| RNA-binding protein rsd1 [Aspergillus oryzae RIB40]
gi|238484073|ref|XP_002373275.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|83765944|dbj|BAE56087.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220701325|gb|EED57663.1| RNA splicing factor (Pad-1), putative [Aspergillus flavus NRRL3357]
gi|391870727|gb|EIT79903.1| transcriptional coactivator CAPER [Aspergillus oryzae 3.042]
Length = 568
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 14/165 (8%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFA 221
RT +DE RRT++V + ++ ++L F G Q+V R+ G V
Sbjct: 166 RTPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---G 222
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
+VEF +E+ A+ L G L P+ ++ ++ NP S + +Y
Sbjct: 223 YVEFKNEDSVAPAIQLTGQKLLGIPIIAQLTEAEKNRQARNPD--ASSGNNHAAPFHRLY 280
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 281 VGNIHFSITENDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQF 324
>gi|395503056|ref|XP_003755889.1| PREDICTED: polyadenylate-binding protein 2 [Sarcophilus harrisii]
Length = 333
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
++ E R++YV ++D T E+L F CG V + C + G P FA++EF+
Sbjct: 192 EKMEADARSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFS 248
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
D++ R +++L ++ ++V+P +T
Sbjct: 249 DKDSVRTSMALDDSLFRGRQIKVIPKRT 276
>gi|308475439|ref|XP_003099938.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
gi|308266205|gb|EFP10158.1| hypothetical protein CRE_24556 [Caenorhabditis remanei]
Length = 408
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 10/136 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL- 235
RT++V ++D +T+E LATLF G V +I D L FAFVEF+D A AL
Sbjct: 38 RTLFVGNLDPAITDEFLATLFNQIGAVTKAKIIFDCFQGLNDPFAFVEFSDHNQASQALQ 97
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
S+ G L +RV A+ P P + E R ++ ++ ++ ++
Sbjct: 98 SMNGRQLLEREMRV---NWAVEPNQPGDRNKPETSRHFH---VFVGDLSAEIDSTKLREA 151
Query: 296 FESVCGEVQRLRLLGD 311
F GEV +++ D
Sbjct: 152 FLPF-GEVSEAKIIRD 166
>gi|164657987|ref|XP_001730119.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
gi|159104014|gb|EDP42905.1| hypothetical protein MGL_2501 [Malassezia globosa CBS 7966]
Length = 664
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/172 (22%), Positives = 72/172 (41%), Gaps = 19/172 (11%)
Query: 162 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
R CR +Q+D RR +++ ++D+ + + L F G+++ C++ + +
Sbjct: 147 RGRPCRIMWSQRDPGQRRAGQGNIFIKNLDEAIDNKALHDTFAAFGKILSCKVASNEHGS 206
Query: 218 LRFAFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
L + FV + + A AA+ ML Y + K A + +E
Sbjct: 207 LGYGFVHYESNDAAEAAIKHVNGMLLNDKKVYVGHHISKKDRQAKI---------EEARA 257
Query: 274 CSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
+Y N+D VTQ + + FE G++ + D + +R FV F+
Sbjct: 258 HYTNVYVKNLDPAVTQEEFEKLFEKY-GKITSAAIATDQEGKSRGFGFVNFS 308
>gi|70947056|ref|XP_743180.1| polyadenylate-binding protein [Plasmodium chabaudi chabaudi]
gi|56522555|emb|CAH74716.1| polyadenylate-binding protein, putative [Plasmodium chabaudi
chabaudi]
Length = 629
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ + VTE L +F T G V+ R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEF 323
F+ S+ G + ++ D + S FV +
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHY 151
>gi|148232022|ref|NP_001082057.1| polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82247012|sp|Q9DDY9.1|PAB2A_XENLA RecName: Full=Polyadenylate-binding protein 2-A; Short=PABP-2-A;
Short=Poly(A)-binding protein 2-A; AltName: Full=Nuclear
poly(A)-binding protein 1-A; AltName:
Full=Poly(A)-binding protein II-A; Short=PABII-A;
AltName: Full=Polyadenylate-binding nuclear protein 1-A;
AltName: Full=XLnPABP2-A; AltName: Full=nPABP2-A;
AltName: Full=xPABPII-A
gi|11527140|gb|AAG36902.1|AF257236_1 poly(A) binding protein II [Xenopus laevis]
gi|38641397|gb|AAR26262.1| nuclear poly(A) binding protein 2 [Xenopus laevis]
gi|49257355|gb|AAH73657.1| PABPII protein [Xenopus laevis]
Length = 296
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T E+L F CG V + C + G P FA++EF D+E R
Sbjct: 163 RSIYVGNVDYGATAEELEAHFHGCGSVNRVTILCDKFTGHPKG---FAYIEFCDKESVRT 219
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L+L ++ ++V+P +T
Sbjct: 220 SLALDESLFRGRQIKVVPKRT 240
>gi|307198835|gb|EFN79611.1| Probable splicing factor, arginine/serine-rich 7 [Harpegnathos
saltator]
Length = 455
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-QVVDCRICGDPNSVLRFAFVEFTDE 228
++++ E IRRT+ V+++D V+ EQL F ++ R+C + +A VE +++
Sbjct: 143 DSRRIEEIRRTLIVANLDASVSAEQLLEFFSNNNVEIKYLRMCSRDSDTEHYALVELSEQ 202
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIA 257
AAL L G L P+++ S AIA
Sbjct: 203 GAVVAALLLNGKSLAERPIKIYHSTQAIA 231
>gi|336389833|gb|EGO30976.1| hypothetical protein SERLADRAFT_455426 [Serpula lacrymans var.
lacrymans S7.9]
Length = 439
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 70/166 (42%), Gaps = 27/166 (16%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 229
++D V+V D+ +V +E L F G + D R+ D NS + F+ F D+
Sbjct: 101 KEDTTGHYHVFVGDLSPEVNDEILGKAFSAFGTMSDARVMWDMNSGKSRGYGFLAFRDKT 160
Query: 230 GARAALS-LAGTMLGFYPVRV-----------------LPSKT--AIAPVNPTFLPRSED 269
A A++ + G LG +RV P T A AP+N P S D
Sbjct: 161 DAEQAIATMNGEWLGSRAIRVNWANQKTQGSVAVASPPRPGATGGAPAPINFQGGPLSYD 220
Query: 270 ----EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+ + T+Y N+ TQ D+ F+S+ G + +R+ D
Sbjct: 221 SVVQQTPSYNSTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD 265
>gi|321464387|gb|EFX75395.1| sex-lethal protein variant 2 [Daphnia pulex]
Length = 297
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/155 (26%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGA 231
D+ R + ++ + Q +TE +L +F+T G V +C+I D F FV + + A
Sbjct: 22 DDSSRTNLIINYLPQNLTESELFKMFVTIGTVTNCKIMRDFRTGYSYGFGFVNYQKADDA 81
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
RA +L G + ++V ++ P ED +E +Y TN+ + VT+
Sbjct: 82 IRAIQTLNGLQIQNKRIKVSYAR-----------PPGEDRKET---NLYVTNLPRDVTED 127
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR--IAFVEF 323
++ F S G + ++ LL D +AFV F
Sbjct: 128 ELTNIF-SAHGNIVQMNLLKDKITGMPRGVAFVRF 161
>gi|71660275|ref|XP_821855.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70887244|gb|EAO00004.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 422
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
Y+ +ID+ VT E L +F CG ++DC + G R+ F++F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 242 LGFYPVRVLPSK 253
L ++V SK
Sbjct: 72 LAGRKIKVGVSK 83
>gi|408390203|gb|EKJ69609.1| hypothetical protein FPSE_10205 [Fusarium pseudograminearum CS3096]
Length = 1080
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALS 236
R TVYV++ + + LF CG+++ R N+ RF +V F D+E + A+
Sbjct: 673 RLTVYVTNYPPAADQNYIRNLFRDCGEILSIRWPSLKVNTHRRFCYVSFRDQEASAKAVE 732
Query: 237 LAGTMLGFYPVRVLPSKTAIAP----VNPTFLPRSEDEREMC---SRTIYCTNIDKKVTQ 289
L GT+L P T + V P + RE R I+ +N+D+ +++
Sbjct: 733 LDGTVLE-------PDGTVLEKRFKLVVKYSDPGYKKAREGALAEGREIHISNLDRSISE 785
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
++K F S G + R+ + + AF++FA
Sbjct: 786 TELKEVF-SKYGNITRVNIPATLAGKNKGFAFIDFA 820
>gi|67480907|ref|XP_655803.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|56472962|gb|EAL50415.1| RNA recognition motif domain containing protein [Entamoeba
histolytica HM-1:IMSS]
gi|449707557|gb|EMD47202.1| RNA recognition domain containing protein [Entamoeba histolytica
KU27]
Length = 297
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 74/151 (49%), Gaps = 4/151 (2%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
+V++ + + + E ++ F+TCG++ + PN + F+EF D++GA A S
Sbjct: 15 SVFIGKLPKSMKENEIREKFITCGRISRMMMQYYPNGQSKGCCFIEFEDKKGAERACSRD 74
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G+++ +RV ++ +N LP++ ++ S I+ + T+ + F +
Sbjct: 75 GSIIDKQYIRVNMAEKKPMKLNYKHLPKTTQKKMNNSYCIFVGKVSSITTESTLVKIF-A 133
Query: 299 VCGEVQRLRLLGDYQHSTR--IAFVEFAMVS 327
CG+V R+ + + R A VEFA ++
Sbjct: 134 KCGKVLRVTIPIWRNTNKRRGFAVVEFASLA 164
>gi|389584751|dbj|GAB67483.1| RNA binding protein [Plasmodium cynomolgi strain B]
Length = 601
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 38/69 (55%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+V + +Y+ +I + +E+ + LF G ++ + + AF+EFT+EE +AA
Sbjct: 162 DVFSKIIYMENIPENCSEDDIKALFKNVGTTTSYKLQYNEQKKMNTAFIEFTNEEHVKAA 221
Query: 235 LSLAGTMLG 243
L L GT +G
Sbjct: 222 LLLNGTKIG 230
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
I VYV ++ VTE+ + F +C +++ P ++ +EF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 237 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 263
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISHNPAF 91
>gi|328866898|gb|EGG15281.1| hypothetical protein DFA_10115 [Dictyostelium fasciculatum]
Length = 407
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGA 231
V+V I + E LA F T GQVVDC+I D N+ + FV FTDEE A
Sbjct: 36 VFVGGISWKADESGLAKYFGTYGQVVDCKIIMDKNTQKSKGYGFVTFTDEESA 88
>gi|198476543|ref|XP_001357388.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
gi|198137744|gb|EAL34457.2| GA10876 [Drosophila pseudoobscura pseudoobscura]
Length = 625
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 10/140 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 267 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 326
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P+S + +Y ++ +T+ ++
Sbjct: 327 LSGQRLLGVPIMVQHTQAEKNRLQNATPAFQPKS----HVGPMRLYVGSLHFDITEEMLR 382
Query: 294 LFFESVCGEVQRLRLLGDYQ 313
FE G++ ++L+ D +
Sbjct: 383 GIFEPF-GKIDAIQLIMDTE 401
>gi|242056799|ref|XP_002457545.1| hypothetical protein SORBIDRAFT_03g009130 [Sorghum bicolor]
gi|241929520|gb|EES02665.1| hypothetical protein SORBIDRAFT_03g009130 [Sorghum bicolor]
Length = 792
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 9/88 (10%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEG 230
A + + ++RTV +S++ +T + + LF CG+VVDC A+VE++ E
Sbjct: 334 ADEADALKRTVQISNLSPVLTVDYIKQLFGLCGKVVDCTTT----DSKHIAYVEYSKPEE 389
Query: 231 ARAALSLAGTMLGFYPVRV-----LPSK 253
A AAL +G P+ V LP K
Sbjct: 390 ATAALEFNSKNVGGRPLNVEMAKSLPPK 417
>gi|33359633|gb|AAQ17064.1| nucleolin 2 [Cyprinus carpio]
Length = 643
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 65/132 (49%), Gaps = 20/132 (15%)
Query: 195 LATLFLTCG-QVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK 253
+A F G ++ D R+ G +F +V+F EE + AL L G L PV++ +K
Sbjct: 240 IAKFFSKEGLEIQDVRVGG----TKKFGYVDFASEEELQKALGLNGKKLMGQPVKLDKAK 295
Query: 254 TAIAPVNPTFLPRSED-EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRL-LGD 311
+ S+D ++E SRT++ N+ VTQ ++K F+ +R+ +G+
Sbjct: 296 SK---------ENSQDSKKERDSRTLFVKNLPYSVTQEELKEIFDQAVD----IRIPMGN 342
Query: 312 YQHSTRIAFVEF 323
S IA++EF
Sbjct: 343 SGSSRGIAYLEF 354
>gi|356576103|ref|XP_003556173.1| PREDICTED: polyadenylate-binding protein 5-like isoform 2 [Glycine
max]
Length = 642
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D++ V EEQL LF Q+ R+C D S L +A+V F + + A A+ L
Sbjct: 36 SLYVGDLEGNVNEEQLYDLFSQVAQIASIRVCRDQTKRSSLGYAYVNFANAQDASNAMEL 95
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F P+ P + + +P+ R+ ++ N+D +
Sbjct: 96 ----LNFTPLNGKPIRIMFSQRDPSI-------RKSGHGNVFIKNLDTSI 134
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 22/168 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D IR++ V++ ++D + + L F G V+ C++ D + + +
Sbjct: 106 IRIMFSQRDPSIRKSGHGNVFIKNLDTSIDNKALHDTFAAFGTVLSCKVALDSSGQSKGY 165
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---R 276
FV+F +EE A+ A+ L G ++ V V F+ R E E+ S
Sbjct: 166 GFVQFDNEEAAQNAIKRLNGMLINDKQVYV-----------GLFIRRQEREQTNGSPKFT 214
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N+ + T D+K F G + ++ D +R FV F
Sbjct: 215 NVYVKNLSETYTDEDLKKLF-GPYGTITSATVMKDVNGKSRCFGFVNF 261
Score = 38.5 bits (88), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D ++E+L LF G + C++ D N + + FV F T EE ++A +
Sbjct: 320 LYLKNLDDSFSDEKLKDLFSEFGTITSCKVMIDSNGRSKGSGFVSFSTPEEASKALNEMN 379
Query: 239 GTMLGFYPVRV 249
G ++G P+ V
Sbjct: 380 GKLIGRKPLYV 390
>gi|157105905|ref|XP_001649078.1| fuse-binding protein-interacting repressor siahbp1 [Aedes aegypti]
gi|108879987|gb|EAT44212.1| AAEL004415-PA [Aedes aegypti]
Length = 672
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 7/147 (4%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ EGA+ AL +
Sbjct: 188 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 247
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 248 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKNYNR-IYIASIHPDLTEEDIKSVFE 304
Query: 298 SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ V G H+ + AF+E+
Sbjct: 305 AFGPIVTCKMSQGSAAHTHKGYAFIEY 331
>gi|448105136|ref|XP_004200421.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|448108271|ref|XP_004201052.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359381843|emb|CCE80680.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
gi|359382608|emb|CCE79915.1| Piso0_003007 [Millerozyma farinosa CBS 7064]
Length = 184
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 3/87 (3%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
Q+E +R++Y+ ++D Q T EQL F T G V I D S +A+VEF + E
Sbjct: 45 QEEADKRSIYIGNVDYQSTPEQLENFFSTVGAVKRVTILFDKFSGFPKGYAYVEFEEYES 104
Query: 231 ARAAL-SLAGTMLGFYPVRVLPSKTAI 256
A+ A+ L G+ +RV+ +T I
Sbjct: 105 AQKAIEELNGSPFRGRELRVMTKRTNI 131
>gi|123485827|ref|XP_001324580.1| spliceosomal protein [Trichomonas vaginalis G3]
gi|121907465|gb|EAY12357.1| spliceosomal protein, putative [Trichomonas vaginalis G3]
Length = 221
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 66/135 (48%), Gaps = 15/135 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALS- 236
T+++ DI + VTEE L LF+ G VV I D N + +AFVEF E+ ALS
Sbjct: 13 TLFLCDISEHVTEEILTELFMQVGPVVFVNIPRDRITNRMNGYAFVEFRTEQDCMYALSV 72
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ G L P+++ + T P + DE ++ ++ +Y N+ + V G++ F
Sbjct: 73 MQGVKLFGVPLKLSANST----------PSTGDELDVGAK-LYIGNLSQDVNDGNLLQTF 121
Query: 297 ESVCGEVQRLRLLGD 311
G V R++ D
Sbjct: 122 RQF-GNVLHARVVVD 135
>gi|221058210|ref|XP_002261613.1| RNA binding protein [Plasmodium knowlesi strain H]
gi|194247618|emb|CAQ41018.1| RNA binding protein, putative [Plasmodium knowlesi strain H]
Length = 584
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 37/69 (53%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAA 234
+V + +Y+ ++ E+ + LF G ++ + + AFVEFT+EE A+AA
Sbjct: 157 DVFSKIIYMENVPPNCREDDIKALFKNVGTTTSYKLHYNEQKKVNTAFVEFTNEEHAKAA 216
Query: 235 LSLAGTMLG 243
L L GT +G
Sbjct: 217 LHLNGTKIG 225
Score = 42.0 bits (97), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 40/89 (44%), Gaps = 6/89 (6%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
I VYV ++ VTE+ + F +C +++ P ++ +EF EG A
Sbjct: 7 IANVVYVKNLSTDVTEKDIKEKFESCDEIIGVVFKNFPGKNQKYCQIEFKSSEGITKASR 66
Query: 237 LAGTMLGFYPVRVLPSKTAIAPV--NPTF 263
L G +L P+ V T I P+ NP F
Sbjct: 67 LNGELLLNVPMVV----TVIEPISHNPPF 91
>gi|255080002|ref|XP_002503581.1| predicted protein [Micromonas sp. RCC299]
gi|226518848|gb|ACO64839.1| predicted protein [Micromonas sp. RCC299]
Length = 597
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 71/150 (47%), Gaps = 19/150 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++Y D+D TE QL LF T G VV R+C D L +A+V F ++GA AA ++
Sbjct: 21 SLYCGDLDSNCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNF--QQGADAARAI 78
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
+L F V P + + +P R+ I+ N+DK++ D K ++
Sbjct: 79 --DVLNFNVVNGKPIRIMYSQRDPAL-------RKSGVGNIFIKNLDKEI---DNKALYD 126
Query: 298 SVC--GEVQRLRLLGDYQHSTR-IAFVEFA 324
+ G + ++ D Q ++ FV+FA
Sbjct: 127 TFSQFGNIVSAKVAADGQGVSKGYGFVQFA 156
Score = 38.5 bits (88), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD-EEGARAALSLA 238
+Y+ +++ V + +L LF G + CR+ D + R AFV F+ +E RA +
Sbjct: 303 LYIKNLEDTVDDAKLRELFAEFGTITSCRVMRDASGASRGSAFVAFSSADEATRAVTEMN 362
Query: 239 GTMLGFYPVRV 249
G M G P+ V
Sbjct: 363 GKMAGTKPLYV 373
>gi|72388298|ref|XP_844573.1| RNA-binding protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62175359|gb|AAX69502.1| RNA-binding protein, putative [Trypanosoma brucei]
gi|62359690|gb|AAX80122.1| hypothetical protein Tb04.30K5.750 [Trypanosoma brucei]
gi|70801106|gb|AAZ11014.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 755
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--L 218
+ R +A++ + I RTV++ + + + +LA L CG+ + RICG+ +
Sbjct: 88 EERQRIAAQSAEETDAIARTVHLRFLPTGMLQSELAALCAQCGEYLRVRICGNSTNTQNW 147
Query: 219 RFAFVEFTDEEGARAALSLAGTML----GFYPVRV 249
+ FVEF D GA A + +G L G P+R+
Sbjct: 148 IYGFVEFADRSGAAAMMRQSGLELPNGPGKPPLRL 182
>gi|70943999|ref|XP_741979.1| RNA-binding protein [Plasmodium chabaudi chabaudi]
gi|56520699|emb|CAH74539.1| RNA-binding protein, putative [Plasmodium chabaudi chabaudi]
Length = 194
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEE 229
+Q+E+ R+++V ++D E+L +LF CG + I + N+ +A++EF D
Sbjct: 61 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGVINRVTILVNKNTGHSKGYAYIEFADPS 120
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
R ALSL+ + ++V + I N
Sbjct: 121 SVRTALSLSESFFKKRQIKVCSKRRNIPGFN 151
>gi|398013689|ref|XP_003860036.1| RNA-binding protein, putative [Leishmania donovani]
gi|322498255|emb|CBZ33329.1| RNA-binding protein, putative [Leishmania donovani]
Length = 409
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEF-TDEEGARA 233
R Y+ +ID+ VT + L +F CG ++DC + G RF F++F T+++ ARA
Sbjct: 9 RFGCYIGNIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARA 65
>gi|261327760|emb|CBH10737.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 755
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 6/95 (6%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--L 218
+ R +A++ + I RTV++ + + + +LA L CG+ + RICG+ +
Sbjct: 88 EERQRIAAQSAEETDAIARTVHLRFLPTGMLQSELAALCAQCGEYLRVRICGNSTNTQNW 147
Query: 219 RFAFVEFTDEEGARAALSLAGTML----GFYPVRV 249
+ FVEF D GA A + +G L G P+R+
Sbjct: 148 IYGFVEFADRSGAAAMMRQSGLELPNGPGKPPLRL 182
>gi|261191422|ref|XP_002622119.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239589885|gb|EEQ72528.1| RNA splicing factor [Ajellomyces dermatitidis SLH14081]
gi|239612708|gb|EEQ89695.1| RNA splicing factor [Ajellomyces dermatitidis ER-3]
gi|327351781|gb|EGE80638.1| RNA splicing factor [Ajellomyces dermatitidis ATCC 18188]
Length = 583
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/159 (27%), Positives = 73/159 (45%), Gaps = 13/159 (8%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRTV+V + ++ ++L F G Q+V R+ G V +VEF D
Sbjct: 182 EDERDRRTVFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKD 238
Query: 228 EEGARAALSLAGTMLGFYPV--RVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDK 285
EE A+ L G L P+ ++ ++ NP S ++ + +Y NI
Sbjct: 239 EESVPLAIQLTGQKLLGIPIIAQLTEAEKNRQARNPE-ANASGNQNSIPFHRLYVGNIHF 297
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+T+ D++ FE GE+ ++L + +R FV+F
Sbjct: 298 SITESDLQKVFEPF-GELDFVQLQKEEGGRSRGYGFVQF 335
>gi|397485813|ref|XP_003814033.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Pan paniscus]
Length = 427
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 34/192 (17%)
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
H D + N+ G T + + + K RM ++YV D+ VTE+ L
Sbjct: 39 HRDCSKNSRGQTHSGKDKEMNVAAKYRMA--------------SLYVGDLHADVTEDLLF 84
Query: 197 TLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSK 253
F T G V+ RIC D L +A+V F A+ AL ++ ++ +R++ S+
Sbjct: 85 RKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQ 144
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGD 311
+L RS ++ N+DK + D K +E S G++ +++ D
Sbjct: 145 ------RDAYLRRS------GIGNVFIKNLDKSI---DNKTLYEHFSAFGKILSSKVMSD 189
Query: 312 YQHSTRIAFVEF 323
Q S AFV F
Sbjct: 190 DQGSKGYAFVHF 201
>gi|198422099|ref|XP_002129220.1| PREDICTED: similar to RNA binding motif protein 39 [Ciona
intestinalis]
Length = 465
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 73/149 (48%), Gaps = 6/149 (4%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
RT++ + Q++ L F + G+V + ++ D +S A+VEF D E AL
Sbjct: 104 RTIFCMQLAQRIRVRDLEEFFSSVGKVREVKLIQDKHSKRSKGIAYVEFKDLESIPLALG 163
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L+G L P+ V P+++ + L S + + +Y ++ + +T+ IK F
Sbjct: 164 LSGQKLLGVPIVVQPTQSEKNKIAAAQL--SLQKAALGPTKLYVGSLHENITEEMIKGIF 221
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
S G V++++++ D ++R F+ FA
Sbjct: 222 -SPFGRVEQVQIIKDDAGASRGYGFITFA 249
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 36/52 (69%), Gaps = 5/52 (9%)
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEF 323
+RTI+C + +++ D++ FF SV G+V+ ++L+ D +HS R IA+VEF
Sbjct: 103 ARTIFCMQLAQRIRVRDLEEFFSSV-GKVREVKLIQD-KHSKRSKGIAYVEF 152
>gi|168036104|ref|XP_001770548.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678256|gb|EDQ64717.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 645
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 54/113 (47%), Gaps = 13/113 (11%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAA 234
+ ++YV D++ V+E QL +F GQVV R+C D L +A+V + + + A A
Sbjct: 22 VSTSLYVGDLESTVSEAQLYEIFSQVGQVVSIRVCRDLITRRSLGYAYVNYNNAQDATRA 81
Query: 235 LSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L L L F V P + + +P+ R+ + I+ N+DK +
Sbjct: 82 LEL----LNFNAVNGKPIRIMFSHRDPSI-------RKSGTANIFIKNLDKSI 123
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 47/103 (45%), Gaps = 18/103 (17%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTD-EEGARAALSLA 238
+Y+ ++D + +E+L +F G +V C++ DP R + FV F+ +E RA +
Sbjct: 308 LYLKNLDDTIDDEKLREIFSEYGTIVSCKVMRDPQGQSRGSGFVAFSSPDEATRAVTEMN 367
Query: 239 GTMLGFYPVRV----------------LPSKTAIAPVNPTFLP 265
G M+G P+ V +T + P PT LP
Sbjct: 368 GKMVGSKPLYVALAQRKEERRNRLQAAFAQRTPVGPAVPTSLP 410
Score = 45.1 bits (105), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 37/166 (22%), Positives = 74/166 (44%), Gaps = 18/166 (10%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F G ++ C++ DP+ + +
Sbjct: 95 IRIMFSHRDPSIRKSGTANIFIKNLDKSIDNKALHDTFAAFGTILSCKVATDPSGQSKGY 154
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV+F EE A+ A+ ML L K V P + D+ + S+ +
Sbjct: 155 GFVQFEQEESAQTAIEKVNGML-------LNDKQVF--VGPFVRRQERDQSGVVSKFNNV 205
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
Y N+ T ++K FE+ G + ++ D + ++ FV F
Sbjct: 206 YVKNLADSTTDDELKKVFEA-YGPISSAVVMRDNEGKSKCFGFVNF 250
>gi|195037090|ref|XP_001989998.1| GH19101 [Drosophila grimshawi]
gi|193894194|gb|EDV93060.1| GH19101 [Drosophila grimshawi]
Length = 476
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+EE L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGTVSEELLVALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ RV K VN P + + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLDKEIK--VNWATSPGNTPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
+ F GE+ R++ D Q S AFV F +E
Sbjct: 112 REAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKAE 148
>gi|115686233|ref|XP_784135.2| PREDICTED: splicing factor 3B subunit 4-like [Strongylocentrotus
purpuratus]
Length = 425
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 70/152 (46%), Gaps = 22/152 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
TVYV +D++VTE L LFL G VV+ + D S + FVEF EE A A+ +
Sbjct: 14 TVYVGGLDEKVTEALLWELFLQAGPVVNTHMPKDRVTQSHQGYGFVEFMGEEDADYAIKV 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y PVRV + S ++ + I+ N+D ++ + +
Sbjct: 74 L-NMIKLYGKPVRVNKA--------------SAHQKNLDVGANIFIGNLDPEIDEKLLYD 118
Query: 295 FFESVCGEVQRLRLLGDYQ--HSTRIAFVEFA 324
F + +Q +++ D + +S AF+ FA
Sbjct: 119 TFSAFGVILQTPKIMRDVESGNSKGYAFINFA 150
>gi|401419092|ref|XP_003874036.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490270|emb|CBZ25530.1| putative RNA-binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 408
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEF-TDEEGARA 233
R Y+ +ID+ VT + L +F CG ++DC + G RF F++F T+++ ARA
Sbjct: 9 RFGCYIGNIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARA 65
>gi|356512787|ref|XP_003525097.1| PREDICTED: RNA-binding protein 39-like [Glycine max]
Length = 554
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 46/173 (26%), Positives = 74/173 (42%), Gaps = 10/173 (5%)
Query: 160 GKR-RMNCRTSNAQQD-EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
G+R R+ S + D E +RTV+ + + TE + F G+V D R+ D NS
Sbjct: 174 GRRFRVKKEASEPEADPERDQRTVFAYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSR 233
Query: 218 LR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDERE 272
++EF D A++L+G +L PV V PS K +
Sbjct: 234 RSKGVGYIEFYDAMSVPMAIALSGQLLLGQPVMVKPSEAEKNLVQSNASGGAAGVAGPYG 293
Query: 273 MCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
R +Y N+ +T+ ++ FE G V+ ++L D + H FV+F
Sbjct: 294 AVDRKLYVGNLHFNMTESQLREIFEPF-GPVEVVQLPLDLETGHCKGFGFVQF 345
>gi|281340677|gb|EFB16261.1| hypothetical protein PANDA_006204 [Ailuropoda melanoleuca]
Length = 196
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE+ L F G V+ RIC D L +A+V F A+ AL +
Sbjct: 3 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 62
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 63 MNFDMIKGKPIRLMWSQ------------RDAYLRKSGIGNVFIKNLDKSI---DNKTLY 107
Query: 297 E--SVCGEVQRLRLLGDYQHSTRIAFVEF 323
E S G++ +++ D Q S AFV F
Sbjct: 108 EHFSAFGKILSSKVMSDDQGSRGYAFVHF 136
>gi|226528044|dbj|BAH56564.1| TIA-1-related RNA binding protein [Spodoptera litura]
Length = 388
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 47/179 (26%), Positives = 77/179 (43%), Gaps = 23/179 (12%)
Query: 163 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS Q D ++V D+ ++ L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKS 136
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSKT-AIAPVN-----PTFL 264
+AFV F + A AA+ ++ G LG + R PSK AP + PTF
Sbjct: 137 KGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTF- 195
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
++ + T+YC V D+ S G++Q +R+ D + AF+ F
Sbjct: 196 DEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGY----AFIRF 250
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDE 228
DE +T+YV ++D VTE + TLF G+V C+I +P + +AF+EFT
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGND-PYAFLEFTSH 56
>gi|146083801|ref|XP_001464839.1| putative RNA-binding protein [Leishmania infantum JPCM5]
gi|134068934|emb|CAM67075.1| putative RNA-binding protein [Leishmania infantum JPCM5]
Length = 409
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 1/67 (1%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
R Y+ +ID+ VT + L +F CG ++DC + G RF F++F E+ A+
Sbjct: 9 RFGCYIGNIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKY 68
Query: 238 AG-TMLG 243
G T++G
Sbjct: 69 NGFTLVG 75
>gi|332820240|ref|XP_526690.3| PREDICTED: polyadenylate-binding protein 4-like [Pan troglodytes]
Length = 428
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 34/192 (17%)
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
H D + N+ G T + + + K RM ++YV D+ VTE+ L
Sbjct: 40 HRDCSKNSRGQTHSGKDKEMNVAAKYRMA--------------SLYVGDLHADVTEDLLF 85
Query: 197 TLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSK 253
F T G V+ RIC D L +A+V F A+ AL ++ ++ +R++ S+
Sbjct: 86 RKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQ 145
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGD 311
+L RS ++ N+DK + D K +E S G++ +++ D
Sbjct: 146 ------RDAYLRRS------GIGNVFIKNLDKSI---DNKTLYEHFSAFGKILSSKVMSD 190
Query: 312 YQHSTRIAFVEF 323
Q S AFV F
Sbjct: 191 DQGSKGYAFVHF 202
>gi|320166285|gb|EFW43184.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 683
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 38/72 (52%), Gaps = 5/72 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCR-ICGDPNSVLRFAFVEFTDEEGARAAL-SL 237
TVYV I VT L F T G + C+ + NS FAF+EF D + A A+ SL
Sbjct: 138 TVYVGSIAPTVTSSALTEFFSTVGPIKHCQQFSQNGNS---FAFIEFGDHQSATLAVGSL 194
Query: 238 AGTMLGFYPVRV 249
G +LG P+RV
Sbjct: 195 NGALLGGQPIRV 206
>gi|301764847|ref|XP_002917846.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Ailuropoda melanoleuca]
Length = 492
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE+ L F G V+ RIC D L +A+V F A+ AL +
Sbjct: 110 SLYVGDLSADVTEDLLFKKFSAVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQKALDT 169
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ M+ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 170 MNFDMIKGKPIRLMWSQ------------RDAYLRKSGIGNVFIKNLDKSI---DNKTLY 214
Query: 297 E--SVCGEVQRLRLLGDYQHSTRIAFVEF 323
E S G++ +++ D Q S AFV F
Sbjct: 215 EHFSAFGKILSSKVMSDDQGSRGYAFVHF 243
>gi|71667313|ref|XP_820607.1| RNA-binding protein [Trypanosoma cruzi strain CL Brener]
gi|70885958|gb|EAN98756.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 424
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
Y+ +ID+ VT E L +F CG ++DC + G R+ F++F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 242 LGFYPVRVLPSK 253
L ++V SK
Sbjct: 72 LAGRKIKVGVSK 83
>gi|413951767|gb|AFW84416.1| hypothetical protein ZEAMMB73_668553 [Zea mays]
Length = 167
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%), Gaps = 2/61 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALS 236
RTV++ ++D++V+E L + + G VVD + D NS+ +AFVE+ EE A+ A+
Sbjct: 7 RTVFIGNLDEKVSERILYEILIQAGHVVDLHVPSDKESNSLKGYAFVEYETEEIAQYAVK 66
Query: 237 L 237
L
Sbjct: 67 L 67
>gi|407407545|gb|EKF31308.1| RNA-binding protein, putative [Trypanosoma cruzi marinkellei]
Length = 425
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
Y+ +ID+ VT E L +F CG ++DC + G R+ F++F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 242 LGFYPVRVLPSK 253
L ++V SK
Sbjct: 72 LAGRKIKVGVSK 83
>gi|224137600|ref|XP_002327166.1| predicted protein [Populus trichocarpa]
gi|222835481|gb|EEE73916.1| predicted protein [Populus trichocarpa]
Length = 632
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+ + ++YV D+D VT+ QL +F GQVV R+C D ++ L + +V +++ + A
Sbjct: 8 QFVPTSLYVGDLDFNVTDSQLYDVFNQVGQVVSVRVCRDLSTRRSLGYGYVNYSNPQDAA 67
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL + L F P+ P + + +P+ R+ I+ N+DK + +
Sbjct: 68 RALDV----LNFTPLNNKPIRIMYSHRDPSI-------RKSGMANIFIKNLDKGIDHKAL 116
Query: 293 KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F S G + ++ D S FV+F
Sbjct: 117 HDTFSSF-GNILSCKVATDASGQSKGYGFVQF 147
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +E+L LF G + C++ DP+ + R + FV F T EE +RA +
Sbjct: 296 LYIKNLDDSINDEKLKELFSDFGAITSCKVMRDPSGISRGSGFVAFSTPEEASRALAEMN 355
Query: 239 GTMLGFYPVRV 249
G ML P+ V
Sbjct: 356 GKMLISKPLYV 366
>gi|170044609|ref|XP_001849934.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
gi|167867688|gb|EDS31071.1| polyadenylate-binding protein 1 [Culex quinquefasciatus]
Length = 628
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 71/168 (42%), Gaps = 21/168 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + +
Sbjct: 73 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDEKGNSKGY 132
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L +K F+PR E E+E+ +
Sbjct: 133 GFVHFETEESANTSIEKVNGML-------LNAKKVFVG---RFIPRKEREKELGEKAKLF 182
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N ++T +K FE G + R++ S FV F
Sbjct: 183 TNVYVKNFGDELTDESLKEMFEK-YGTITSHRVMIKENKSRGFGFVAF 229
>gi|291084655|ref|NP_001108206.2| polyadenylate-binding protein 4-like [Homo sapiens]
Length = 428
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 34/192 (17%)
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
H D + N+ G T + + + K RM ++YV D+ VTE+ L
Sbjct: 40 HRDCSKNSRGQTHSGKDKEMNVAAKYRMA--------------SLYVGDLHADVTEDLLF 85
Query: 197 TLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSK 253
F T G V+ RIC D L +A+V F A+ AL ++ ++ +R++ S+
Sbjct: 86 RKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQ 145
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGD 311
+L RS ++ N+DK + D K +E S G++ +++ D
Sbjct: 146 ------RDAYLRRS------GIGNVFIKNLDKSI---DNKTLYEHFSAFGKILSSKVMSD 190
Query: 312 YQHSTRIAFVEF 323
Q S AFV F
Sbjct: 191 DQGSKGYAFVHF 202
>gi|115475163|ref|NP_001061178.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|75325377|sp|Q6Z1C0.1|NUCL1_ORYSJ RecName: Full=Nucleolin 1; AltName: Full=Protein NUCLEOLIN LIKE 1
gi|40253662|dbj|BAD05605.1| putative nucleolin [Oryza sativa Japonica Group]
gi|51449869|gb|AAU01907.1| putative nucleolin [Oryza sativa Indica Group]
gi|113623147|dbj|BAF23092.1| Os08g0192900 [Oryza sativa Japonica Group]
gi|125602459|gb|EAZ41784.1| hypothetical protein OsJ_26324 [Oryza sativa Japonica Group]
Length = 572
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
T+++ ++ + ++Q+ F G+V+ R+ + R F V+F E A+ AL L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELH 371
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQGD 291
G L PVR+ +A + P S + + S++I+ D + +
Sbjct: 372 GCDLDGRPVRL-----DLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESK 426
Query: 292 IKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
I+ E + CGE+ R+ + D + S IA+++F
Sbjct: 427 IRESLEGHFADCGEITRVSVPMDRETGASKGIAYIDF 463
>gi|407846855|gb|EKG02815.1| RNA-binding protein, putative [Trypanosoma cruzi]
Length = 422
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
Y+ +ID+ VT E L +F CG ++DC + G R+ F++F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFASEDDRARAMKYNGFT 71
Query: 242 LGFYPVRVLPSK 253
L ++V SK
Sbjct: 72 LAGRKIKVGVSK 83
>gi|449016981|dbj|BAM80383.1| polyadenylate-binding protein [Cyanidioschyzon merolae strain 10D]
Length = 999
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 70/154 (45%), Gaps = 16/154 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGAR 232
E+ ++YV D+ V E+ L LF + G VV R+C D L +A+V F + E A
Sbjct: 172 ELPNVSLYVGDLQPDVVEQNLFELFSSVGPVVSVRVCRDVVTRRSLGYAYVNFQNPEDAE 231
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
A+ + L FY + +K P+ + +R I+ N+DK + D
Sbjct: 232 RAIDV----LQFYEGPLTKNK----PIRIMWKRSDPSQRRNPEGNIFIKNLDKSI---DN 280
Query: 293 KLFFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
K ++ S G+V +L D + +S AFV +
Sbjct: 281 KALYDTFSTFGKVLSCKLATDDKGNSLGYAFVHY 314
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 42/177 (23%), Positives = 74/177 (41%), Gaps = 30/177 (16%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFA 221
R+ + S+ Q +++ ++D+ + + L F T G+V+ C++ D + L +A
Sbjct: 251 RIMWKRSDPSQRRNPEGNIFIKNLDKSIDNKALYDTFSTFGKVLSCKLATDDKGNSLGYA 310
Query: 222 FVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER--EMCSR-- 276
FV + D A+ +S + G +L V V F PR E E E+ ++
Sbjct: 311 FVHYQDANVAKYVISKMNGMLLNGQKVYVG-----------EFRPRREREATGELSTKFT 359
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFAMVSEPFSWH 333
+Y N+D ES+C + +L Y + T I F+ V E H
Sbjct: 360 NVYVKNLD------------ESLCTTEEVTKLFAPYGNITSI-FIPTETVQEQQPHH 403
>gi|365192966|gb|AEW68341.1| putative nuclear acid binding protein [Medicago sativa]
Length = 409
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 51/198 (25%), Positives = 87/198 (43%), Gaps = 28/198 (14%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GT NG R +S G++R D+ T++V D+ V++ L +
Sbjct: 134 NGTIMPNGGQNFRLNWATFSSGEKR---------HDDSPDYTIFVGDLAADVSDHHLTEV 184
Query: 199 FLT-CGQVVDCRICGDPNSVLR--FAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP--- 251
F T V ++ D N+ + FV F DE E RA + G + P+R+ P
Sbjct: 185 FRTRYNSVKGAKVVIDRNTGRSKGYGFVRFADESEQMRAMTEMQGVLCSTRPMRIGPASN 244
Query: 252 ----SKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRL 306
++T+ A NP +++E + + TI+ N+D VT +K F + GE+ +
Sbjct: 245 KNLGTQTSKASYQNPQG--GAQNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGELVHV 301
Query: 307 RLLGDYQHSTRIAFVEFA 324
++ R FV+FA
Sbjct: 302 KI----PSGKRCGFVQFA 315
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LA 238
T++V ++D VT+E L +F G++V +I S R FV+F D A AL L
Sbjct: 273 TIFVGNLDPNVTDEHLKQVFTQYGELVHVKIP----SGKRCGFVQFADRSSAEEALRVLN 328
Query: 239 GTMLGFYPVRV 249
GT+LG VR+
Sbjct: 329 GTLLGGQNVRL 339
>gi|302755076|ref|XP_002960962.1| hypothetical protein SELMODRAFT_402481 [Selaginella moellendorffii]
gi|300171901|gb|EFJ38501.1| hypothetical protein SELMODRAFT_402481 [Selaginella moellendorffii]
Length = 755
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 60/131 (45%), Gaps = 16/131 (12%)
Query: 136 MHTDGTANTNG---HTTTRRKRNGYSQGKRRMNCRTSNAQQ--------DEVIRRTVYVS 184
+H++ TN + R K N Q + R A Q DE+ T +VS
Sbjct: 576 LHSEAKMATNEGDRDASEREKPNEQGQAPATTDGRGEAATQFKKNRVFTDEL---TAFVS 632
Query: 185 DIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLAGTML 242
+ID ++TE++L F CG + R+ D N+ A+++F +EE AA+S T L
Sbjct: 633 NIDLELTEKELKEFFAPCGGLKGVRLLRDRNTRRSRGLAYIDFENEENLAAAISKNRTKL 692
Query: 243 GFYPVRVLPSK 253
G V V SK
Sbjct: 693 GARKVSVARSK 703
>gi|47228418|emb|CAG05238.1| unnamed protein product [Tetraodon nigroviridis]
Length = 386
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 32/105 (30%), Positives = 43/105 (40%), Gaps = 33/105 (31%)
Query: 177 IRRTVYVSDIDQQV---------------------------------TEEQLATLFLTCG 203
IRRTVYV +++ QV T EQL F G
Sbjct: 158 IRRTVYVGNLNSQVAKCQICGIRAEQRPRVEGQLMEGELDSFCLQTTTAEQLLEFFRQVG 217
Query: 204 QVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVR 248
V R+ GD RFAFVEF++++ AL+ G M G P++
Sbjct: 218 SVKFVRMAGDETQPTRFAFVEFSEQDSVARALTFNGVMFGDRPLK 262
>gi|307206655|gb|EFN84627.1| Nucleolysin TIAR [Harpegnathos saltator]
Length = 274
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 69/154 (44%), Gaps = 31/154 (20%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
+E RT+YV ++D V+E+ L LF G V C+I +P + +AFVEFT+ + A
Sbjct: 3 EESNPRTLYVGNLDTTVSEDLLCALFSQIGAVKGCKIIREPGND-PYAFVEFTNHQCA-- 59
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNP-TFLPRSEDEREMCSR---TIYCTNIDKKVTQ 289
TA+A +N +FL + S T+YC +T
Sbjct: 60 -------------------ATALAAMNKRSFLDKEMKVYNQSSPTNCTVYCGGFTNGITD 100
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
IK F S G +Q +R+ + + AF++F
Sbjct: 101 ELIKKTF-SPFGTIQDIRVFKEKGY----AFIKF 129
>gi|125560429|gb|EAZ05877.1| hypothetical protein OsI_28114 [Oryza sativa Indica Group]
Length = 572
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/157 (23%), Positives = 71/157 (45%), Gaps = 18/157 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLA 238
T+++ ++ + ++Q+ F G+V+ R+ + R F V+F E A+ AL L
Sbjct: 312 TLFMGNLSFNLNQDQVKEFFQEVGEVISVRLATHEDGSSRGFGHVQFASSEEAKKALELH 371
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRS-------EDEREMCSRTIYCTNIDKKVTQGD 291
G L PVR+ +A + P S + + S++I+ D + +
Sbjct: 372 GCDLDGRPVRL-----DLAHERGAYTPHSRNDTGSFQKQNRGSSQSIFVKGFDSSLEESK 426
Query: 292 IKLFFE---SVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
I+ E + CGE+ R+ + D + S IA+++F
Sbjct: 427 IRESLEGHFADCGEITRVSVPMDRETGASKGIAYIDF 463
>gi|409079019|gb|EKM79381.1| hypothetical protein AGABI1DRAFT_128535 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1026
Score = 47.4 bits (111), Expect = 0.010, Method: Composition-based stats.
Identities = 41/150 (27%), Positives = 70/150 (46%), Gaps = 14/150 (9%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
+ T+YV++ + + + F G +++ R + RF +V++ A+AAL
Sbjct: 693 KSTLYVTNFPESADDSYMRNFFEKYGTILETRWPSKKFKATRRFCYVQYISPAAAQAALE 752
Query: 237 LAGTML--GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKL 294
L G L G PV V S NP + +R+ R IY + K T+GD++
Sbjct: 753 LHGRELEPGL-PVSVFIS-------NPE-RKKERTDRDADEREIYVAGLSKFTTKGDLEK 803
Query: 295 FFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
F + G+V+ +RL + H+ AFVE+
Sbjct: 804 IFRTY-GKVKDIRLAAEGDGHAKGYAFVEY 832
Score = 38.1 bits (87), Expect = 5.8, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 33/57 (57%), Gaps = 2/57 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
TV+V+D+ + T + L LF CG V + +I P+ ++ A VEF D E AAL+
Sbjct: 621 TVFVTDLPRNATNDDLFRLFKDCGGVREVKIMPFPDILI--ATVEFHDRESVPAALT 675
>gi|391328788|ref|XP_003738866.1| PREDICTED: polyadenylate-binding protein 2-like [Metaseiulus
occidentalis]
Length = 193
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFV 223
S ++ E+ +R++YV ++D T E+L F CG V + C + G P FA++
Sbjct: 58 SEQEKKEIDQRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCDKFSGHPKG---FAYI 114
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
EF D++ A+++ ++ ++VL +T + ++ T
Sbjct: 115 EFADKDSVETAMAMDDSLFRGRQIKVLQKRTNMPGISTT 153
>gi|425772940|gb|EKV11320.1| Polyadenylate-binding protein [Penicillium digitatum PHI26]
gi|425781989|gb|EKV19920.1| Polyadenylate-binding protein [Penicillium digitatum Pd1]
Length = 736
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 72/167 (43%), Gaps = 16/167 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGY 175
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + I
Sbjct: 176 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNI 228
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
Y NID ++T + ++ FE+ GE+ L D +R FV +A
Sbjct: 229 YIKNIDLEITDDEFRVMFEAF-GEITSATLSHDQDGKSRGFGFVNYA 274
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 106 LNYTLIKGKPCRIMWSQ 122
>gi|409042148|gb|EKM51632.1| hypothetical protein PHACADRAFT_261883 [Phanerochaete carnosa
HHB-10118-sp]
Length = 911
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/148 (26%), Positives = 67/148 (45%), Gaps = 10/148 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
+ T+YV++ + ++ + LF G + D R S RF +V++T A AAL
Sbjct: 569 KSTLYVTNFPETADDKSIRELFGKYGVLFDVRWPSKKFKSTRRFCYVQYTSPSAAEAALE 628
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P +T ++ + + + R +Y + K V +GD++ F
Sbjct: 629 LHDHELE-------PDRTLQVYISNPERKKERTDADANDRELYVAGLAKSVKKGDLEKLF 681
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
S G V+ +R+ D + T+ AFVEF
Sbjct: 682 -STYGTVKDIRMGFDEKGQTKGFAFVEF 708
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
TV+V+ + TE+ L TLF CG + + +I PNS++ A VEF + E AAL+
Sbjct: 497 TVFVAHLPTDTTEDDLRTLFKDCGPIREIKITSMPNSLV--ATVEFMERESVPAALT 551
>gi|448522951|ref|XP_003868821.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis Co 90-125]
gi|380353161|emb|CCG25917.1| hypothetical protein CORT_0C05430 [Candida orthopsilosis]
Length = 178
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDE 228
A+Q+EV R++YV ++D Q T EQL F G + I D S L +A+VEF
Sbjct: 26 AKQEEVDSRSIYVGNVDYQSTPEQLEEFFHVVGVIERVTILFDKYSGLPKGYAYVEFEKI 85
Query: 229 EGARAALS-LAGTMLGFYPVRVLPSKT 254
E A+ L G VRV P +T
Sbjct: 86 ESVNKAVEDLHGKEFRGREVRVTPKRT 112
>gi|350417503|ref|XP_003491454.1| PREDICTED: hypothetical protein LOC100748299 [Bombus impatiens]
Length = 622
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 67/154 (43%), Gaps = 33/154 (21%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR------------------- 219
RT++V ++ + VT++QL LF G++ R+ G + L
Sbjct: 342 RTIFVGNLPKDVTKKQLQKLFKQFGKIDAIRLRGKISKSLNIPKRVAAITNELHPKMKSV 401
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIY 279
+A++ F EE + ALS+ G +RV S + ++R ++++
Sbjct: 402 YAYIRFESEESTKKALSVNGRKFEGNYIRVDMSMKS-------------NDRYETKKSVF 448
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ 313
N+ V ++ F+ CGE+Q +R++ D Q
Sbjct: 449 IGNLHFNVDDDSVRNHFKR-CGEIQSVRIIRDNQ 481
>gi|196012776|ref|XP_002116250.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
gi|190581205|gb|EDV21283.1| hypothetical protein TRIADDRAFT_30657 [Trichoplax adhaerens]
Length = 139
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R+VYV ++D T E+L F CG V + C + G P FA++EF+D+E +
Sbjct: 11 RSVYVGNVDYAATAEELEQHFHGCGSVNRVTILCDKFSGHPKG---FAYIEFSDKESVKT 67
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
A++L ++ ++V P +T
Sbjct: 68 AMALDDSLFRGRQIKVSPKRT 88
>gi|118398866|ref|XP_001031760.1| RNA binding protein [Tetrahymena thermophila]
gi|89286093|gb|EAR84097.1| RNA binding protein [Tetrahymena thermophila SB210]
Length = 451
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDEEGARAALS 236
RT++V ++ +++EEQL F +CG +++ R+ DP + F +V F ++ G + AL
Sbjct: 183 RTIFVGNLHFKISEEQLRHHFESCGDILNVRVIRDPKTHEGKGFGYVFFKEKTGFQNALE 242
Query: 237 LAGTMLGFYPVRV 249
GT L +RV
Sbjct: 243 KNGTKLLEREIRV 255
>gi|307211749|gb|EFN87744.1| RNA-binding protein 34 [Harpegnathos saltator]
Length = 555
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 43/190 (22%), Positives = 81/190 (42%), Gaps = 34/190 (17%)
Query: 144 TNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG 203
T GH + ++ + ++ + S +Q+EV R+T+++ +I ++ L +F G
Sbjct: 232 TIGHLGIKMFKDASEKNEQAVKKSLSPEEQEEVDRKTIFIDNIPKETKITTLKKVFGQYG 291
Query: 204 QVVDCR-----------------ICGD--PNSVLRFAFVEFTDEEGARAALSLAGTML-G 243
+ + R I D P V A++++ EE A+ ALS+ G G
Sbjct: 292 PIDNLRFRNIVPKNPKISKKVAAIKQDIHPKIVTVVAYIKYKSEESAKKALSMNGKKFEG 351
Query: 244 FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
Y VN + + E+ ++I+ N+ + DI F S CGE+
Sbjct: 352 NY-------------VNVKIVAKLGQEKHNIKKSIFIGNLKFGMNTNDIWENF-SKCGEI 397
Query: 304 QRLRLLGDYQ 313
+ +RL+ D +
Sbjct: 398 ESVRLIRDKK 407
>gi|157867749|ref|XP_001682428.1| putative RNA-binding protein [Leishmania major strain Friedlin]
gi|68125882|emb|CAJ03486.1| putative RNA-binding protein [Leishmania major strain Friedlin]
Length = 409
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEF-TDEEGARA 233
R Y+ +ID+ VT + L +F CG ++DC + G RF F++F T+++ ARA
Sbjct: 9 RFGCYIGNIDRSVTIDMLKQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARA 65
>gi|290996979|ref|XP_002681059.1| RRM domain-containing protein [Naegleria gruberi]
gi|284094682|gb|EFC48315.1| RRM domain-containing protein [Naegleria gruberi]
Length = 285
Score = 47.4 bits (111), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 50/99 (50%), Gaps = 8/99 (8%)
Query: 164 MNCRTSNAQQ----DEVIRRT--VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
M+ R QQ DE RT V+V ++ + E+ + LF TCG++ + R+ D ++
Sbjct: 115 MDGREVQLQQSKARDEFSGRTTQVFVGNLPESAEEQDIRELFETCGEIEEVRMPKDKDTE 174
Query: 218 LR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKT 254
+ FAFV+F D +AAL G+ +RV K+
Sbjct: 175 KKKGFAFVQFRDSSSVKAALEKDGSEFKGVSIRVNEEKS 213
>gi|390603148|gb|EIN12540.1| hypothetical protein PUNSTDRAFT_81810 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1034
Score = 47.0 bits (110), Expect = 0.011, Method: Composition-based stats.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 18/152 (11%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
+ T+Y+++ + ++ + LF G + D R S RF +V+FT + A+A+L
Sbjct: 701 QSTLYITNFPEGTDDQAIRGLFSKYGTIFDVRWPSKKFKSTRRFCYVQFTSPDAAKASLE 760
Query: 237 LAGTMLG-FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVTQGDI 292
L G L P+ VL S P ER + R IY + K T+ D+
Sbjct: 761 LHGRELEPGMPLSVLISN-----------PERRKERTDANADDREIYVAGLSKFATKADL 809
Query: 293 KLFFESVCGEVQRLRL-LGDYQHSTRIAFVEF 323
+ F++ G ++ +R+ L D + AFVEF
Sbjct: 810 EKIFKTY-GTLKDVRMALDDKGNCKGFAFVEF 840
Score = 41.6 bits (96), Expect = 0.55, Method: Composition-based stats.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
Query: 142 ANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT 201
A +N + + S K +++ + ++D T++V+D+ E L LF
Sbjct: 592 AESNAKRKAEDQPDAESSKKPKLDTTPAQLKRDRE-NCTIFVADLPVNTAEGDLKALFKD 650
Query: 202 CGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
CG + D +I PN+V+ A VEF + E AAL+
Sbjct: 651 CGGIRDIKITKLPNAVV--ATVEFNERESVPAALT 683
>gi|343474538|emb|CCD13844.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 757
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDE 228
A + +VI RTV++ + + + +LA L CG+ + RICG+ + + FVEF D
Sbjct: 100 AVETDVIARTVHLRFLPTGMLQSELAALCAECGEYLRVRICGNSTTTQNWIYGFVEFADR 159
Query: 229 EGARAALSLAGTML----GFYPVRV 249
GA A + +G L G P+R+
Sbjct: 160 AGAAAMMRRSGMELPNGPGKPPLRL 184
>gi|281212020|gb|EFA86181.1| hypothetical protein PPL_00743 [Polysphondylium pallidum PN500]
Length = 602
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 46/97 (47%), Gaps = 2/97 (2%)
Query: 142 ANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLT 201
A G T + NG+S + + + A + +YV+ ++ QVT+E LA F
Sbjct: 202 ATPEGATAAIEQMNGHSIDLKFLKVSYATATSSQSTHANLYVNRLEPQVTKEDLAEAFSK 261
Query: 202 CGQVVDCRICGDPN--SVLRFAFVEFTDEEGARAALS 236
G+VV+ +I DPN S FV F+ A ALS
Sbjct: 262 FGEVVETKILVDPNTGSSRCVGFVHFSARRNALTALS 298
>gi|9294658|dbj|BAB03007.1| unnamed protein product [Arabidopsis thaliana]
Length = 1006
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+++ + VS++ +T EQL LF CG VVDC I + A++E+++ E A AAL+
Sbjct: 349 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKH----IAYIEYSNSEEATAALA 404
Query: 237 LA-----GTMLGFYPVRVLPSK 253
L G L + LP K
Sbjct: 405 LNNTEVFGRALNVEIAKSLPHK 426
>gi|408392881|gb|EKJ72170.1| hypothetical protein FPSE_07657 [Fusarium pseudograminearum CS3096]
Length = 484
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 234 AL 235
A+
Sbjct: 138 AM 139
>gi|428178044|gb|EKX46921.1| hypothetical protein GUITHDRAFT_162845 [Guillardia theta CCMP2712]
Length = 824
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 1/79 (1%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEG 230
+Q +V +R +YVS + + V++E + F T +V++ R+ D + LR F +VEF D G
Sbjct: 648 EQRDVDQRVLYVSGLSKNVSKESIKDHFSTVAEVLEVRLMRDRDGNLRGFCYVEFKDRAG 707
Query: 231 ARAALSLAGTMLGFYPVRV 249
A +L + T+ +RV
Sbjct: 708 AELSLQMDQTVFQGKKLRV 726
>gi|343474220|emb|CCD14084.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 757
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 6/85 (7%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV--LRFAFVEFTDE 228
A + +VI RTV++ + + + +LA L CG+ + RICG+ + + FVEF D
Sbjct: 100 AVETDVIARTVHLRFLPTGMLQSELAALCAECGEYLRVRICGNSTTTQNWIYGFVEFADR 159
Query: 229 EGARAALSLAGTML----GFYPVRV 249
GA A + +G L G P+R+
Sbjct: 160 AGAAAMMRRSGMELPNGPGKPPLRL 184
>gi|328715704|ref|XP_001946343.2| PREDICTED: nucleolysin TIA-1 isoform p40-like isoform 1
[Acyrthosiphon pisum]
Length = 419
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 74/174 (42%), Gaps = 17/174 (9%)
Query: 163 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N +S Q D ++V D+ ++ + L F G++ DCR+ DP ++
Sbjct: 76 KLNWVSSPGPQLKADTSKHHHIFVGDLSPEIETQTLREAFAPFGEISDCRVVRDPQTLKS 135
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDE 270
+ FV F + A +A+ ++ G LG + R P+ + P ++
Sbjct: 136 KGYGFVSFLKKAEAESAIAAMNGQWLGSRSIRTNWATRKPPTLKTDSNTKPLTFDEVYNQ 195
Query: 271 REMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+ T+YC + +T ++ F G +Q +R+ D + AFV FA
Sbjct: 196 SSPTNCTVYCGGLTSGLTDELVQKTFAPF-GNIQEIRVFKDKGY----AFVRFA 244
>gi|296082474|emb|CBI21479.3| unnamed protein product [Vitis vinifera]
Length = 373
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 61/132 (46%), Gaps = 11/132 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+V R ++V + T E L F GQ+ DC + D N+ + FV F +GA
Sbjct: 102 DVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAV 161
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL G + R+ +++ +A + P+ P+S+D R IY +N+ V +
Sbjct: 162 KALKQPGKKIN---NRM--TQSQLASMGPSPPPQSQD---TVGRKIYVSNVQADVDPERL 213
Query: 293 KLFFESVCGEVQ 304
+ FF GE++
Sbjct: 214 RSFFAKF-GEIE 224
>gi|30687254|ref|NP_189032.2| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|334185580|ref|NP_001189958.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643307|gb|AEE76828.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643309|gb|AEE76830.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 987
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 43/82 (52%), Gaps = 9/82 (10%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+++ + VS++ +T EQL LF CG VVDC I + A++E+++ E A AAL+
Sbjct: 349 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKH----IAYIEYSNSEEATAALA 404
Query: 237 LA-----GTMLGFYPVRVLPSK 253
L G L + LP K
Sbjct: 405 LNNTEVFGRALNVEIAKSLPHK 426
>gi|68070939|ref|XP_677383.1| polyadenylate-binding protein [Plasmodium berghei strain ANKA]
gi|56497479|emb|CAH95361.1| polyadenylate-binding protein, putative [Plasmodium berghei]
Length = 833
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ + VTE L +F T G V+ R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEF 323
F+ S+ G + ++ D + S FV +
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHY 151
>gi|358342556|dbj|GAA49996.1| RNA-binding protein 39 [Clonorchis sinensis]
Length = 730
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/139 (26%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAAL 235
RTV+V + ++ + L F + G++ D R+ D N R A+VEF + E A+ AL
Sbjct: 79 RTVFVWQLSARIRQRDLEDFFTSVGKIRDVRLIMD-NKTKRSKGIAYVEFREVESAQLAL 137
Query: 236 SLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
L GT L P+++ S K + + P ++ M +Y ++ +T+ +
Sbjct: 138 GLTGTRLLGVPIQIQQSHAEKNRMNAIPSVPKPTQQNRGPM---KLYIGSLHYNITEEML 194
Query: 293 KLFFESVCGEVQRLRLLGD 311
K FE G++ ++L+ D
Sbjct: 195 KGIFEPF-GKIDDIKLIKD 212
>gi|339253200|ref|XP_003371823.1| polyadenylate-binding protein 2 [Trichinella spiralis]
gi|316967866|gb|EFV52232.1| polyadenylate-binding protein 2 [Trichinella spiralis]
Length = 208
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 44/81 (54%), Gaps = 8/81 (9%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R+V+V ++D E+L F CG + + C R G P FA++EF D+E ARA
Sbjct: 64 RSVFVGNVDYGAAAEELEAHFHGCGAINRITILCDRYSGRPKG---FAYIEFADKESARA 120
Query: 234 ALSLAGTMLGFYPVRVLPSKT 254
+L++ T+ ++V+ +T
Sbjct: 121 SLAMTDTLFRGRQIKVVEKRT 141
>gi|303272375|ref|XP_003055549.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463523|gb|EEH60801.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 606
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 42/150 (28%), Positives = 68/150 (45%), Gaps = 21/150 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++Y D+D TE QL LF T G VV R+C D L +A+V F + ARA +
Sbjct: 33 SLYCGDLDPSCTEAQLYELFSTIGPVVSIRVCRDLITRRSLGYAYVNFQQGNDAARAIDA 92
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L ++ P+R++ S+ R R+ I+ N+DK++ D K +
Sbjct: 93 LNFQVVNGKPIRIMYSQ------------RDPALRKSGVGNIFIKNLDKEI---DNKALY 137
Query: 297 ESVC--GEVQRLRLLGDYQ-HSTRIAFVEF 323
++ G + ++ D Q S FV+F
Sbjct: 138 DTFAQFGNIVSAKVATDLQGQSKGYGFVQF 167
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/82 (24%), Positives = 43/82 (52%), Gaps = 5/82 (6%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ +++ ++D+++ + L F G +V ++ D + +
Sbjct: 103 IRIMYSQRDPALRKSGVGNIFIKNLDKEIDNKALYDTFAQFGNIVSAKVATDLQGQSKGY 162
Query: 221 AFVEFTDEEGARAALSLAGTML 242
FV+F EEGA++A+ ML
Sbjct: 163 GFVQFDTEEGAQSAIEKVNGML 184
>gi|119720774|gb|ABL97957.1| poly(A)-binding protein II-like [Brassica rapa]
Length = 220
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 48/90 (53%), Gaps = 1/90 (1%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFT 226
+ A ++EV R+V+V ++D T E++ F +CG V I D + FA+VEF
Sbjct: 81 ANQAGKEEVDARSVFVGNVDYACTPEEVQQHFQSCGTVHRVTILTDKFGQPKGFAYVEFV 140
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
+ E + AL L + L ++VLP +T +
Sbjct: 141 EVEAIQEALQLNESELHGRQLKVLPKRTNV 170
>gi|82595449|ref|XP_725855.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23481012|gb|EAA17420.1| polyA binding protein-related [Plasmodium yoelii yoelii]
Length = 859
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 70/151 (46%), Gaps = 23/151 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR----FAFVEFTDEEGARAAL 235
++YV D+ + VTE L +F T G V+ R+C D SV R +A+V + + A AL
Sbjct: 17 SLYVGDLSEDVTEAVLYEIFNTVGHVLSIRVCRD--SVTRKSLGYAYVNYHNLADAERAL 74
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
L + ++ P++ + +P+ R+ + I+ N+DK + D K
Sbjct: 75 D----TLNYTNIKGQPARLMWSHRDPSL-------RKSGTGNIFVKNLDKTI---DNKAL 120
Query: 296 FE--SVCGEVQRLRLLGD-YQHSTRIAFVEF 323
F+ S+ G + ++ D + S FV +
Sbjct: 121 FDTFSMFGNILSCKVATDEFGKSKNYGFVHY 151
>gi|357138034|ref|XP_003570603.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 216
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N T+ A+ ++V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 77 NASTAEAK-EQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 135
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF ++E + AL+L + L ++V P +T +
Sbjct: 136 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 168
>gi|389600963|ref|XP_003722977.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322504591|emb|CBZ14490.1| putative RNA-binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 404
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG-T 240
Y+ +ID+ VT + L +F CG ++DC + G RF F++F E+ A+ G T
Sbjct: 13 YIGNIDRSVTIDMLRQVFCQCGTIIDCSLNGREGDPYRFGFIDFATEDDRARAMKYNGFT 72
Query: 241 MLG 243
++G
Sbjct: 73 LVG 75
>gi|256085557|ref|XP_002578985.1| hypothetical protein [Schistosoma mansoni]
gi|353233139|emb|CCD80494.1| hypothetical protein Smp_078240 [Schistosoma mansoni]
Length = 949
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
TV+VS++D V+EEQ+ F CG V R+ D + FA+VEF ++E + AL+L
Sbjct: 652 TVFVSNLDYSVSEEQIQHTFEKCGNVTSVRLVRDYAGRSKGFAYVEFENKESVKTALTL 710
>gi|363753804|ref|XP_003647118.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
gi|356890754|gb|AET40301.1| hypothetical protein Ecym_5562 [Eremothecium cymbalariae
DBVPG#7215]
Length = 580
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 15/107 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALS- 236
++YV ++D V+E L +F G V R+C D N+ L +A+V F D E R A+
Sbjct: 39 SLYVGELDPSVSEALLYDIFSPIGSVSSIRVCRDAITNTSLGYAYVNFHDHEAGRKAIEQ 98
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNI 283
L T++ P R++ S+ R R+ S IY N+
Sbjct: 99 LNYTLIKGKPCRIMWSQ------------RDPSLRKKGSGNIYIKNL 133
>gi|217072312|gb|ACJ84516.1| unknown [Medicago truncatula]
gi|388501418|gb|AFK38775.1| unknown [Medicago truncatula]
Length = 216
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 51/100 (51%), Gaps = 2/100 (2%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFT 226
S ++E R+V+V ++D T E++ F +CG V I D + FA+VEF
Sbjct: 77 ASQENKEEADARSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFV 136
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPR 266
+ E + AL L+ + L ++VLP +T + P + PR
Sbjct: 137 ETEAVQEALLLSESELHGRQLKVLPKRTNV-PGMKQYRPR 175
>gi|46122079|ref|XP_385593.1| hypothetical protein FG05417.1 [Gibberella zeae PH-1]
Length = 473
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A
Sbjct: 78 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 137
Query: 234 AL 235
A+
Sbjct: 138 AM 139
>gi|256071828|ref|XP_002572240.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043837|emb|CCD81383.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 214
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLR 219
N S+ + EV R+VYV ++D T ++L F CG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
FA++EF + AA++L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|357138032|ref|XP_003570602.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 210
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N T+ A+ ++V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 71 NASTAEAK-EQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF ++E + AL+L + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|451798952|gb|AGF69179.1| polyadenylate-binding protein 2-like protein, partial [Triticum
aestivum]
Length = 497
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 55/116 (47%), Gaps = 15/116 (12%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF 220
KRR +A D+ + +Y+ ++D +T++QL LF G++ C+I D N V +
Sbjct: 188 KRRFEQSMKDAA-DKYQGQNLYLKNLDDGITDDQLRELFSNFGKITSCKIMRDQNGVSKG 246
Query: 221 A-FVEF-TDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC 274
+ FV F T EE ++A + G M+ P+ V F R ED + M
Sbjct: 247 SGFVSFSTREEASQALTEMNGKMISGKPLYV------------AFAQRKEDRKAML 290
>gi|168278697|dbj|BAG11228.1| RNA binding motif protein 19 [synthetic construct]
Length = 960
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE+L +F G V C I N + F FVE+ E A+ A
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P T + + R+ + I NI + +I+
Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAV-TLARKKQVPRKQTTSKILVRNIPFQAHSREIR 849
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 850 ELF-STFGELKTVRL 863
>gi|158256324|dbj|BAF84133.1| unnamed protein product [Homo sapiens]
gi|189054403|dbj|BAG37176.1| unnamed protein product [Homo sapiens]
Length = 960
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE+L +F G V C I N + F FVE+ E A+ A
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P T + + R+ + I NI + +I+
Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAV-TLARKKQVPRKQTTSKILVRNIPFQAHSREIR 849
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 850 ELF-STFGELKTVRL 863
>gi|79313347|ref|NP_001030753.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
gi|332643308|gb|AEE76829.1| RNA recognition motif (RRM)-containing protein [Arabidopsis
thaliana]
Length = 934
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 177 IRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
+++ + VS++ +T EQL LF CG VVDC I + A++E+++ E A AAL+
Sbjct: 349 LKKFLQVSNLSPSLTTEQLRQLFSFCGTVVDCSITDSKH----IAYIEYSNSEEATAALA 404
Query: 237 LAGTML 242
L T +
Sbjct: 405 LNNTEV 410
>gi|302754900|ref|XP_002960874.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
gi|302767436|ref|XP_002967138.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300165129|gb|EFJ31737.1| hypothetical protein SELMODRAFT_10868 [Selaginella moellendorffii]
gi|300171813|gb|EFJ38413.1| hypothetical protein SELMODRAFT_21095 [Selaginella moellendorffii]
Length = 619
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 53/110 (48%), Gaps = 13/110 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+D V+E QL LF GQV+ R+C D L +A+V + + + A AL L
Sbjct: 5 SLYVGDLDPNVSENQLYDLFNQIGQVLSIRVCRDLMTRRSLGYAYVNYNNVQDATRALEL 64
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
L F PV + + +P+ R+ + I+ N+D+ +
Sbjct: 65 ----LNFTPVNGKAVRIMFSHRDPSI-------RKSGTANIFIKNLDRAI 103
Score = 45.4 bits (106), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 30/136 (22%), Positives = 63/136 (46%), Gaps = 15/136 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F++ G ++ C++ D N + +
Sbjct: 75 VRIMFSHRDPSIRKSGTANIFIKNLDRAIDNKALHDTFVSFGNILSCKVATDSNGQSKGY 134
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
FV+F EE A+ A+ ML V + + P F+ R E E+ ++
Sbjct: 135 GFVQFEQEESAQVAIDKVNGML------VAEKQVFVGP----FVRRQEREQNGKFNNVFV 184
Query: 281 TNIDKKVTQGDIKLFF 296
N+ + T ++K F
Sbjct: 185 KNLGESTTDDELKEVF 200
>gi|290981403|ref|XP_002673420.1| polyadenylate binding protein [Naegleria gruberi]
gi|284087003|gb|EFC40676.1| polyadenylate binding protein [Naegleria gruberi]
Length = 571
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 78/178 (43%), Gaps = 31/178 (17%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRIC---------G 212
R +Q+D IR++ +++ ++D+ + + L F G ++ C++C G
Sbjct: 77 IRIMWSQRDPSIRKSGIGNIFIKNLDKSIDNKALYDTFSAFGNILSCKVCQATKKGDNGG 136
Query: 213 DPNSVLRFAFVEFTDEEGARAALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
D + FV F +E A A++ + G +L V V P F+ ++E +
Sbjct: 137 DNVESAGYGFVHFETQEAAEKAIAKINGMLLNGKQVFVGP-----------FVKKTERLK 185
Query: 272 EMCSR----TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL-GDYQHSTRIAFVEFA 324
+ + IY N+D V + ++ F S GE+Q ++ G+ S F+ FA
Sbjct: 186 ILSNEDSFTNIYVKNLDASVDEKELSEVF-SKFGEIQNAVVMRGENGASKEFGFINFA 242
Score = 45.4 bits (106), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 38/157 (24%), Positives = 67/157 (42%), Gaps = 27/157 (17%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSL 237
++YV D+ ++++E L LF G ++ RIC D L +A+V F + + A AL
Sbjct: 7 SLYVGDLHEEISEALLFDLFHEVGPIISIRICRDAMTRKSLGYAYVNFQNPQDAERALD- 65
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
L + V+ +P + + +P+ R+ I+ N+DK + D K ++
Sbjct: 66 ---TLNYASVKGIPIRIMWSQRDPSI-------RKSGIGNIFIKNLDKSI---DNKALYD 112
Query: 298 S-----------VCGEVQRLRLLGDYQHSTRIAFVEF 323
+ VC ++ GD S FV F
Sbjct: 113 TFSAFGNILSCKVCQATKKGDNGGDNVESAGYGFVHF 149
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LAG 239
+YV ++D V +E+L F G + ++ D F FV F E A AL+ ++G
Sbjct: 299 LYVKNLDDSVDDERLRQEFSKFGDITSAKVMSDNKQSRGFGFVCFKTPEAANKALTEMSG 358
Query: 240 TMLGFYPVRV 249
M+G P+ V
Sbjct: 359 HMIGSKPLYV 368
>gi|13279134|gb|AAH04289.1| RBM19 protein [Homo sapiens]
gi|13544005|gb|AAH06137.1| RBM19 protein [Homo sapiens]
gi|190689379|gb|ACE86464.1| RNA binding motif protein 19 protein [synthetic construct]
gi|190690741|gb|ACE87145.1| RNA binding motif protein 19 protein [synthetic construct]
Length = 960
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE+L +F G V C I N + F FVE+ E A+ A
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P T + + R+ + I NI + +I+
Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAV-TLARKKQVPRKQTTSKILVRNIPFQAHSREIR 849
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 850 ELF-STFGELKTVRL 863
>gi|168001180|ref|XP_001753293.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695579|gb|EDQ81922.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1129
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
T++V++I+ +T +QL LF CG VVDC + + A+VE++ EGA+A LSL
Sbjct: 343 TLHVTNINPILTADQLRQLFNYCGTVVDCAMSESKTT----AYVEYSRPEGAKAGLSLND 398
Query: 240 TMLGFYPVRV 249
+G ++V
Sbjct: 399 MPVGGQNLKV 408
>gi|332374616|gb|AEE62449.1| unknown [Dendroctonus ponderosae]
Length = 228
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 49/96 (51%), Gaps = 8/96 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG + + C R G P FA++EF D +
Sbjct: 96 EVDNRSIYVGNVDYGATAEELEQHFHGCGSINRVTILCNRFDGHPKG---FAYIEFGDRD 152
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
+ A+++ ++ ++V+P +T ++ T P
Sbjct: 153 SVQTAMAMDESLFRGRQIKVMPKRTNRPGISTTNRP 188
>gi|348516557|ref|XP_003445805.1| PREDICTED: polyadenylate-binding protein 2-like [Oreochromis
niloticus]
Length = 240
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T ++L F CG V + C R G P FA++EF+D + ++
Sbjct: 60 RSIYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFSDRDSVQS 116
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A+ L T+ ++V+P +T + ++ T
Sbjct: 117 AIGLHETLFRGRVLKVMPKRTNMPGISTT 145
>gi|328772736|gb|EGF82774.1| hypothetical protein BATDEDRAFT_22908 [Batrachochytrium
dendrobatidis JAM81]
Length = 961
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 160 GKRRMNCRTSN-AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL 218
G R++ S+ ++ ++ + +YVS++ +TE+ L LF G++ R+ PN
Sbjct: 762 GDRKIGVAISDPTKKMQIDHKKLYVSNLSHTMTEDDLQELFSKFGEISALRVVRMPNGNS 821
Query: 219 R-FAFVEFTDEEGARAALSLAGTML 242
+ AFVE+ E+ A+ A++L GTM+
Sbjct: 822 KGIAFVEYNQEDHAKEAMTLNGTMV 846
>gi|226497574|ref|NP_057280.2| probable RNA-binding protein 19 [Homo sapiens]
gi|226497654|ref|NP_001140170.1| probable RNA-binding protein 19 [Homo sapiens]
gi|226497734|ref|NP_001140171.1| probable RNA-binding protein 19 [Homo sapiens]
gi|308153566|sp|Q9Y4C8.3|RBM19_HUMAN RecName: Full=Probable RNA-binding protein 19; AltName:
Full=RNA-binding motif protein 19
Length = 960
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE+L +F G V C I N + F FVE+ E A+ A
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P T + + R+ + I NI + +I+
Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAV-TLARKKQVPRKQTTSKILVRNIPFQAHSREIR 849
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 850 ELF-STFGELKTVRL 863
>gi|255934068|ref|XP_002558315.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582934|emb|CAP81139.1| Pc12g15120 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 496
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 41/79 (51%), Gaps = 4/79 (5%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G VV +I D N + + FVEF D A
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNFTTKGHNYGFVEFDDPGAA 146
Query: 232 -RAALSLAGTMLGFYPVRV 249
RA +L G + +RV
Sbjct: 147 ERAMQTLNGRRIHQSEIRV 165
>gi|332231054|ref|XP_003264711.1| PREDICTED: polyadenylate-binding protein 4-like [Nomascus
leucogenys]
Length = 428
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 34/192 (17%)
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
H D + ++ G T + + + K RM ++YV D+ VTE+ L
Sbjct: 40 HRDCSKSSRGQTHSGKDKEMNVAAKYRMA--------------SLYVGDLHADVTEDLLF 85
Query: 197 TLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSK 253
F T G V+ RIC D L +A+V F A+ AL ++ M+ +R++ S+
Sbjct: 86 RKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDMIKGKSIRLMWSQ 145
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGD 311
+L RS ++ N+DK + D K +E S G++ +++ D
Sbjct: 146 ------RDAYLRRS------GIGNVFIKNLDKSI---DNKTLYEHFSAFGKILSSKVMSD 190
Query: 312 YQHSTRIAFVEF 323
Q S AFV F
Sbjct: 191 DQGSKGYAFVHF 202
>gi|254578926|ref|XP_002495449.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
gi|238938339|emb|CAR26516.1| ZYRO0B11660p [Zygosaccharomyces rouxii]
Length = 587
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 59/133 (44%), Gaps = 17/133 (12%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFT 226
S++Q+ E ++YV ++D V+E L +F G V R+C D + L +A+V F
Sbjct: 30 SDSQKVETSTASLYVGELDPTVSEALLYDIFSPIGSVSSIRVCRDAITKTSLGYAYVNFN 89
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTN---- 282
D E R A+ L + P++ P + + +P+ R+ S I+ N
Sbjct: 90 DYEAGRQAIE----KLNYTPIKGQPCRIMWSQRDPSL-------RKKGSGNIFIKNLHAD 138
Query: 283 IDKKVTQGDIKLF 295
ID K +F
Sbjct: 139 IDNKALHDTFSVF 151
>gi|5912081|emb|CAB55987.1| hypothetical protein [Homo sapiens]
Length = 960
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE+L +F G V C I N + F FVE+ E A+ A
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 790
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P T + + R+ + I NI + +I+
Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAV-TLARKKQVPRKQTTSKILVRNIPFQAHSREIR 849
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 850 ELF-STFGELKTVRL 863
>gi|356502130|ref|XP_003519874.1| PREDICTED: uncharacterized protein LOC100784338 [Glycine max]
Length = 884
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 72/150 (48%), Gaps = 25/150 (16%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSLA 238
++V +D+ TEE L +F G++V+ R+ + N +AFV+F+D+E A+ ALS
Sbjct: 391 IFVGGLDRDATEEDLRKVFQRIGEIVEVRLHKNSSTNKNKGYAFVKFSDKEHAKKALSEM 450
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
PV + + AP SED + T++ NI T+ IK +
Sbjct: 451 KN-----PV-IHGKRCGTAP--------SED-----NDTLFLGNICNTWTKEAIKQKLKD 491
Query: 299 VCGE-VQRLRLLGDYQH---STRIAFVEFA 324
E V+ + L+ D QH S AF+EF+
Sbjct: 492 YGIEGVENIMLVPDVQHEGLSWGFAFLEFS 521
>gi|224094981|ref|XP_002310314.1| predicted protein [Populus trichocarpa]
gi|222853217|gb|EEE90764.1| predicted protein [Populus trichocarpa]
Length = 391
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 67/154 (43%), Gaps = 9/154 (5%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
+RTV+V + + TE + F G+V D R+ D NS +VEF D A+
Sbjct: 20 QRTVFVYQMPLKATERDVYEFFSKAGKVRDVRLIMDRNSRRSKGVGYVEFYDAMSVPMAI 79
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM----CSRTIYCTNIDKKVTQGD 291
+L+G +L PV V PS+ V P+ R +Y N+ +T+
Sbjct: 80 TLSGQLLLGQPVMVKPSEAEKNLVQPSASGGGTGGVTGPFGAVDRKLYVGNLHFNMTEMQ 139
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
++ FE G V+ ++L D + FV+F
Sbjct: 140 LRQLFEPF-GIVELVQLPLDLETGQCKGFGFVQF 172
>gi|171474005|gb|AAX31042.2| SJCHGC09749 protein [Schistosoma japonicum]
gi|226468246|emb|CAX69800.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489703|emb|CAX75002.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489705|emb|CAX75003.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
gi|226489707|emb|CAX75004.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLR 219
N S+ + EV R+VYV ++D T ++L F CG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
FA++EF + AA++L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|310798506|gb|EFQ33399.1| CC1-like family splicing factor [Glomerella graminicola M1.001]
Length = 565
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
T +DE RRTV+V + ++ L F G V + +I D S +VEF
Sbjct: 169 TPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEF 228
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSR 276
+E+ AL L G L P+ V ++ T +P +P
Sbjct: 229 KNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTAAHPNSIP---------FH 279
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMVSE 328
+Y NI VT+ D++ FE GE++ ++L D +R FV++ S+
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQ 331
>gi|294950711|ref|XP_002786744.1| hypothetical protein Pmar_PMAR029686 [Perkinsus marinus ATCC 50983]
gi|239901080|gb|EER18540.1| hypothetical protein Pmar_PMAR029686 [Perkinsus marinus ATCC 50983]
Length = 195
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 232
++ +++RTVYVS + QVT E++ +F G++ + I P +FA VEF +E A+
Sbjct: 50 EEMILKRTVYVSGLANQVTLEEVQGMFGHFGEIKESSIDVSPYDQCQFALVEFQNEAAAQ 109
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A+ + VRV SK + PT
Sbjct: 110 EAIRVGEIPYRGRVVRVEKSKETVKLYPPT 139
>gi|229595173|ref|XP_001019281.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila]
gi|1262277|gb|AAA96781.1| nucleolar phosphoprotein [Tetrahymena thermophila]
gi|225566349|gb|EAR99036.3| nucleolar phosphoprotein, putative [Tetrahymena thermophila SB210]
Length = 476
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 34/71 (47%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
+T++V ++ + +E L F +CG+V D RI F VEF + G AL
Sbjct: 355 KTIFVGNLSFRTDKETLKKFFASCGKVADARIAEADGKSRGFGHVEFEERSGVENALKKV 414
Query: 239 GTMLGFYPVRV 249
G + P++V
Sbjct: 415 GEQIDGRPIKV 425
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 11/124 (8%)
Query: 202 CGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGT-MLGFYPVRVLPSKTAIAPV 259
CG V + + + AFV F EEG A+ ++ + +G Y ++ KT
Sbjct: 287 CGSVARVNLLKNEQGRSKGIAFVSFETEEGCNKAVEMSNSEFMGRY---LIIEKTKPKTE 343
Query: 260 NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIA 319
P LP ED S+TI+ N+ + + +K FF S CG+V R+ S
Sbjct: 344 RPAHLPVDED-----SKTIFVGNLSFRTDKETLKKFFAS-CGKVADARIAEADGKSRGFG 397
Query: 320 FVEF 323
VEF
Sbjct: 398 HVEF 401
>gi|115397599|ref|XP_001214391.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
gi|114192582|gb|EAU34282.1| hypothetical protein ATEG_05213 [Aspergillus terreus NIH2624]
Length = 568
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 71/165 (43%), Gaps = 26/165 (15%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRT++V + ++ ++L F G Q+V R+ G V +VEF +
Sbjct: 172 EDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKN 228
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--------IY 279
EE A+ L G L P+ IA + R E S + +Y
Sbjct: 229 EESVAPAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNPEASSGSNHAAPFHRLY 280
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 281 VGNIHFSITESDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQF 324
>gi|29436780|gb|AAH49453.1| Cugbp1 protein [Danio rerio]
Length = 534
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 71/168 (42%), Gaps = 14/168 (8%)
Query: 160 GKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD----PN 215
G ++MN + Q ++ ++V I + +E+QL LF G V + + D P
Sbjct: 35 GSKKMNGSLDHPDQPDIDSIKMFVGQIPRTWSEDQLRELFEPYGAVYEINVLRDRSQNPP 94
Query: 216 SVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS 275
FV + + A A + + +++LP + P SE +
Sbjct: 95 QSKGCCFVTYYTRKSALEAQN------ALHNMKILPGMHHPIQMKPA---DSEKNNAVED 145
Query: 276 RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
R ++ I KK + DI+L F S G+++ R+L +R AFV F
Sbjct: 146 RKLFVGMISKKCNENDIRLMF-SPYGQIEECRILRGPDGLSRCAFVTF 192
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 33/57 (57%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAAL 235
R ++V I ++ E + +F GQ+ +CRI P+ + R AFV FT + A++A+
Sbjct: 146 RKLFVGMISKKCNENDIRLMFSPYGQIEECRILRGPDGLSRCAFVTFTARQMAQSAI 202
>gi|452822710|gb|EME29727.1| RNA-binding protein [Galdieria sulphuraria]
Length = 198
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 8/94 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDE 228
+EV RR+VYV ++D T E+L F CG + + C + G P FA++EF E
Sbjct: 67 EEVDRRSVYVGNVDYGSTPEELQAHFKECGTINRVTILCDKFTGHPKG---FAYIEFATE 123
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
EGA A+ L ++ ++V +T + ++ T
Sbjct: 124 EGANNAVILNESLFRGRNLKVSIKRTNVPGISTT 157
>gi|40788328|dbj|BAA31657.2| KIAA0682 protein [Homo sapiens]
Length = 973
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE+L +F G V C I N + F FVE+ E A+ A
Sbjct: 744 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 803
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P T + + R+ + I NI + +I+
Sbjct: 804 LKQLQGHVVDGHKLEVRISERATKPAV-TLARKKQVPRKQTTSKILVRNIPFQAHSREIR 862
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 863 ELF-STFGELKTVRL 876
>gi|359386152|gb|AEV43365.1| poly A-binding protein 2 [Citrus sinensis]
Length = 652
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 17/153 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEF-TDEEGA 231
+ + ++YV D+D V + QL LF GQVV R+C D ++ L + +V + E
Sbjct: 36 QFVSTSLYVGDLDLSVNDSQLYDLFNQMGQVVSVRVCRDLSTRRSLGYGYVNYNAAHEAT 95
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
RA L T L P+R++ S +PT R+ + I+ N+DK +
Sbjct: 96 RALDELNFTPLNGKPIRIMYSYR-----DPTI-------RKSGAGNIFIKNLDKSIDNKA 143
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ F S G + ++ D +R FV+F
Sbjct: 144 LHDTF-STFGNILSCKVATDSLGQSRGYGFVQF 175
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D IR++ +++ ++D+ + + L F T G ++ C++ D R +
Sbjct: 111 IRIMYSYRDPTIRKSGAGNIFIKNLDKSIDNKALHDTFSTFGNILSCKVATDSLGQSRGY 170
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV+F +EE A++A+ L G +L V V P FL R ++ +T
Sbjct: 171 GFVQFDNEESAKSAIDKLNGMLLNDKQVFVGP-----------FL-RKQERESTADKTRF 218
Query: 278 --IYCTNIDKKVTQGDIKLFF 296
+Y N+ + T+ D+K F
Sbjct: 219 NNVYVKNLSETTTEDDLKKIF 239
Score = 45.1 bits (105), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D +++++L LF G + C++ DPN + R + FV F T EE ++A +
Sbjct: 324 LYVKNLDDSISDDKLKELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASKALTEMN 383
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 384 GKMVVSKPLYV 394
>gi|195574479|ref|XP_002105216.1| GD21365 [Drosophila simulans]
gi|194201143|gb|EDX14719.1| GD21365 [Drosophila simulans]
Length = 363
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/156 (23%), Positives = 68/156 (43%), Gaps = 16/156 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS-L 237
++V D+ ++ +QL F G++ DCR+ DP ++ + FV F + A A++ +
Sbjct: 99 IFVGDLSAEIETQQLKDAFTPFGEISDCRVVRDPQTLKSKGYGFVSFVKKSEAETAITAM 158
Query: 238 AGTMLGF------YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT--- 288
G LG + R P+ A P ++ + T+YC I+ ++
Sbjct: 159 NGQWLGSRSIRTNWATRKPPATKADMNAKPLTFDEVYNQSSPTNCTVYCGGINGALSGFL 218
Query: 289 QGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEFA 324
+I S G +Q +R+ D + AFV F+
Sbjct: 219 NEEILQKTFSPYGTIQEIRVFKDKGY----AFVRFS 250
>gi|357460829|ref|XP_003600696.1| Splicing factor 3B subunit [Medicago truncatula]
gi|355489744|gb|AES70947.1| Splicing factor 3B subunit [Medicago truncatula]
Length = 379
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 23/124 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T YV ++D Q++EE L LF+ G VV+ + D N + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKV 85
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV +K S+D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRV--NKA------------SQDKKSLDVGANLFIGNLDPDV---DEKL 127
Query: 295 FFES 298
+++
Sbjct: 128 LYDT 131
>gi|195429537|ref|XP_002062815.1| GK19652 [Drosophila willistoni]
gi|194158900|gb|EDW73801.1| GK19652 [Drosophila willistoni]
Length = 638
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/146 (23%), Positives = 63/146 (43%), Gaps = 20/146 (13%)
Query: 162 RRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV 217
R R +Q+D +RR+ V++ ++D+Q+ + + F G ++ C++ D
Sbjct: 69 RNKPIRIMWSQRDPSLRRSGVGNVFIKNLDRQIDNKAIYDTFSAFGNILSCKVALDEKGN 128
Query: 218 LR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
+ + FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 129 SKGYGFVHFETEEAANTSIEKVNGML-------LNGKKVYV---GKFIPRKEREKELGEK 178
Query: 277 T-----IYCTNIDKKVTQGDIKLFFE 297
+Y N ++ +K FFE
Sbjct: 179 AKLFTNVYVKNFTEEFDDEKLKDFFE 204
>gi|225708572|gb|ACO10132.1| RNA-binding protein 7 [Osmerus mordax]
Length = 266
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
RT++V ++DQ+VTEE L LFL G ++ +I D + + F F F EE A ++L
Sbjct: 9 RTLFVGNLDQKVTEELLFELFLQAGPLIKVKIPKDNDGKQKSFGFAVFKHEESAPYGMNL 68
Query: 238 A-GTML 242
GT L
Sbjct: 69 LNGTSL 74
>gi|410912492|ref|XP_003969723.1| PREDICTED: polyadenylate-binding protein 2-like [Takifugu rubripes]
Length = 262
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 47/89 (52%), Gaps = 8/89 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R+VYV ++D T ++L F CG V + C R G P FA++EF+D + +
Sbjct: 82 RSVYVGNVDYGATADELEIHFNGCGPVNRVTILCDRFSGHPKG---FAYIEFSDRDSVNS 138
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A+ L T+ ++VLP +T + ++ T
Sbjct: 139 AIGLHETLFRGRVLKVLPKRTNLPGISTT 167
>gi|345567796|gb|EGX50724.1| hypothetical protein AOL_s00075g150 [Arthrobotrys oligospora ATCC
24927]
Length = 1471
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 67/157 (42%), Gaps = 20/157 (12%)
Query: 158 SQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNS 216
++ K+R+N R Q TVYV++ E + LF CG +++ R N+
Sbjct: 1066 TRDKKRLNGREITVQLG--FNTTVYVTNFPPTADENWIRELFKECGPILEVRFPSLKYNN 1123
Query: 217 VLRFAFVEFTDEEGARAALSLAGT-MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC- 274
RF +V+F E A A + G + GF V L P + ER
Sbjct: 1124 HRRFCYVQFDASEDAEKATEMNGKDVEGFKLVSKLSD------------PNVKQERSGAV 1171
Query: 275 --SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLL 309
R ++ NID T+ DI+ F S G V+ +RL+
Sbjct: 1172 YEGREVFVRNIDYAATEDDIRELF-SKYGTVKSIRLI 1207
>gi|342870153|gb|EGU73450.1| hypothetical protein FOXB_16088 [Fusarium oxysporum Fo5176]
Length = 474
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +Y+ +DQ+VTEE L +F T G V + +I D N+ + FVE+ D A
Sbjct: 80 EPNKRALYIGGLDQRVTEEVLRQIFETTGHVQNVKIIPDKNARGYNYGFVEYDDPGAAER 139
Query: 234 AL 235
A+
Sbjct: 140 AM 141
>gi|118371394|ref|XP_001018896.1| polyadenylate-binding protein 2 [Tetrahymena thermophila]
gi|89300663|gb|EAR98651.1| polyadenylate-binding protein 2 [Tetrahymena thermophila SB210]
Length = 180
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/84 (26%), Positives = 46/84 (54%), Gaps = 1/84 (1%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEG 230
QQ E +R+++V +++ T+E+L +F CG++ I + FA+++F D+
Sbjct: 52 QQKEEDKRSIFVQNVEYNTTKEELMDIFKDCGEIEKITIPQTRQGQGKGFAYIQFVDKSS 111
Query: 231 ARAALSLAGTMLGFYPVRVLPSKT 254
A +L+ ++ ++VLP +T
Sbjct: 112 VELAKALSDSIHRGRAIKVLPKRT 135
>gi|325089595|gb|EGC42905.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus H88]
Length = 492
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +Y+ +D +VTE+ L +F T G V +I D NS L + FVE+ D A
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 234 ALS 236
A+S
Sbjct: 148 AMS 150
>gi|268564716|ref|XP_002639198.1| C. briggsae CBR-PABP-2 protein [Caenorhabditis briggsae]
Length = 205
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFT 226
++ E ++VYV ++D T E++ F CG V I G P FA+VEFT
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKG---FAYVEFT 127
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
+++G + AL++ ++L ++V P +T
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDPKRT 155
>gi|66810518|ref|XP_638966.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
gi|60467589|gb|EAL65610.1| hypothetical protein DDB_G0283687 [Dictyostelium discoideum AX4]
Length = 727
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 60/126 (47%), Gaps = 7/126 (5%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGA 231
+E +RTV+VS + Q + E+ L+ LF G V++ R+ D + +VEF+ +E
Sbjct: 261 EESDQRTVFVSKLSQNIVEKDLSDLFSQAGTVLNVRLITDKVTKRMKGVGYVEFSQKEMV 320
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
A++L+G++L + V +I P S SR IY I V +
Sbjct: 321 DKAIALSGSVLDGQQILV----HSIQPEKKVIKSNSTGSSGGESR-IYVGYIHLSVAEEQ 375
Query: 292 IKLFFE 297
I++ F+
Sbjct: 376 IRVIFQ 381
>gi|340502094|gb|EGR28811.1| splicing factor subunit 4, putative [Ichthyophthirius multifiliis]
Length = 267
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 71/151 (47%), Gaps = 23/151 (15%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T+YV IDQ+VT+E L LF CG VV+ + D + + FVEF EE A ++ +
Sbjct: 13 TIYVGGIDQKVTQEVLWELFSQCGIVVNVHLPKDKITGEHQGYGFVEFKSEEDADYSIKI 72
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGDIKL 294
++ Y P++V + S+D+R + I+ N+D+ +T+ +
Sbjct: 73 M-HLVKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDQSITEQQLHD 117
Query: 295 FFESVCGEVQRLRLL--GDYQHSTRIAFVEF 323
F S G + R++ D S AFV +
Sbjct: 118 TF-SQFGLIISRRIVRDPDNDESKGYAFVSY 147
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 24/84 (28%), Positives = 45/84 (53%), Gaps = 6/84 (7%)
Query: 166 CRTSNAQQDEVIRRT---VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRF 220
+ + A QD+ + +++ ++DQ +TE+QL F G ++ RI DP++ +
Sbjct: 83 IKVNKASQDKRTQEVGANIFIGNLDQSITEQQLHDTFSQFGLIISRRIVRDPDNDESKGY 142
Query: 221 AFVEFTDEEGARAAL-SLAGTMLG 243
AFV + + E A AA+ ++ G G
Sbjct: 143 AFVSYDNFEAADAAINTMNGQFFG 166
>gi|256071830|ref|XP_002572241.1| polyadenylate binding protein [Schistosoma mansoni]
gi|360043836|emb|CCD81382.1| putative polyadenylate binding protein [Schistosoma mansoni]
Length = 223
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLR 219
N S+ + EV R+VYV ++D T ++L F CG + + C + G P
Sbjct: 81 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 137
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
FA++EF + AA++L + ++VLP +T + ++ T P
Sbjct: 138 FAYIEFDTRDAVEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 183
>gi|195445204|ref|XP_002070221.1| GK11939 [Drosophila willistoni]
gi|194166306|gb|EDW81207.1| GK11939 [Drosophila willistoni]
Length = 469
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 74/158 (46%), Gaps = 14/158 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAATT 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ RV K VN P ++ + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLEKE--IKVNWATSPGNQPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
+ F GE+ R++ D Q S AFV F +E
Sbjct: 112 REAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKAE 148
>gi|118785284|ref|XP_314526.3| AGAP010553-PA [Anopheles gambiae str. PEST]
gi|116128011|gb|EAA09944.4| AGAP010553-PA [Anopheles gambiae str. PEST]
Length = 643
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 60/121 (49%), Gaps = 6/121 (4%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
VYV I ++ E+ + FL G + + DP + FAFVE+ EGA+ AL +
Sbjct: 162 VYVGSISFELKEDTIRAAFLPFGPIKSINMSWDPITQKHKGFAFVEYEIPEGAQLALEQM 221
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
G MLG ++V + + P + ++E + +R IY +I +T+ DIK FE
Sbjct: 222 NGAMLGGRNIKV--GRPSNMPQAQQVIDEIQEEAKSYNR-IYIASIHPDLTEEDIKSVFE 278
Query: 298 S 298
+
Sbjct: 279 A 279
>gi|336364894|gb|EGN93247.1| hypothetical protein SERLA73DRAFT_172163 [Serpula lacrymans var.
lacrymans S7.3]
Length = 684
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 66/148 (44%), Gaps = 15/148 (10%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
YS K R CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++
Sbjct: 107 YSLIKNRA-CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 165
Query: 213 DPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDER 271
D + + + FV + E A A+ ML L K + + R
Sbjct: 166 DEHGRSKGYGFVHYETGEAAETAIKAVNGML-------LNDKKVYVGYHISRKERQSKLD 218
Query: 272 EMCSR--TIYCTNIDKKVTQGDIKLFFE 297
EM ++ +Y N+D VTQ + + F+
Sbjct: 219 EMKAQFTNLYIKNLDTSVTQDEFEEMFQ 246
>gi|225438781|ref|XP_002283105.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
gi|296082381|emb|CBI21386.3| unnamed protein product [Vitis vinifera]
Length = 654
Score = 47.0 bits (110), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+YV ++D + +++L LF G + C++ DPN + R + FV F T EE +RA +
Sbjct: 316 LYVKNLDDSIADDKLRELFSEFGTITSCKVMRDPNGISRGSGFVAFSTAEEASRALADMN 375
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 376 GKMVASKPLYV 386
Score = 45.8 bits (107), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 69/154 (44%), Gaps = 19/154 (12%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+ + ++YV D++ VT+ L LF G VV R+C D ++ L + +V + + + A
Sbjct: 28 QFVSTSLYVGDLESNVTDSHLYDLFGQLGPVVSVRVCRDLSTRRSLGYGYVNYGNTQDAA 87
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL ML F P+ P + + +P+ R + I+ N+DK + D
Sbjct: 88 RALD----MLNFTPLNGKPIRIMYSFRDPSI-------RRSGTANIFIKNLDKAI---DN 133
Query: 293 KLFFE--SVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
K ++ S G + ++ D S FV+F
Sbjct: 134 KALYDTFSTFGAILSCKIATDASGQSKGYGFVQF 167
Score = 40.8 bits (94), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 33/134 (24%), Positives = 61/134 (45%), Gaps = 22/134 (16%)
Query: 173 QDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTD 227
+D IRR+ +++ ++D+ + + L F T G ++ C+I D + + + FV+F +
Sbjct: 110 RDPSIRRSGTANIFIKNLDKAIDNKALYDTFSTFGAILSCKIATDASGQSKGYGFVQFDN 169
Query: 228 EEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT----IYCTN 282
EE A+ A L G +L V V P R ++ ++T +Y N
Sbjct: 170 EESAKNATDKLNGMLLNDKQVYVGP------------FVRKQERESATNKTKFNNVYVKN 217
Query: 283 IDKKVTQGDIKLFF 296
+ + T D+K F
Sbjct: 218 LLESTTDEDLKNIF 231
>gi|308494172|ref|XP_003109275.1| CRE-PABP-2 protein [Caenorhabditis remanei]
gi|308246688|gb|EFO90640.1| CRE-PABP-2 protein [Caenorhabditis remanei]
Length = 205
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFT 226
++ E ++VYV ++D T E++ F CG V I G P FA+VEFT
Sbjct: 71 EKAEADAKSVYVGNVDYGATAEEIEQHFHGCGSVARVTILCDKFSGHPKG---FAYVEFT 127
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
+++G + AL++ ++L ++V P +T
Sbjct: 128 EKDGMQNALAMTDSLLRGRQIKVDPKRT 155
>gi|380478594|emb|CCF43506.1| CC1-like family splicing factor [Colletotrichum higginsianum]
Length = 565
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 72/173 (41%), Gaps = 22/173 (12%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
T +DE RRTV+V + ++ L F G V + +I D S +VEF
Sbjct: 169 TPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVTEAQIVKDRISQRSKGVGYVEF 228
Query: 226 TDEEGARAALSLAGTMLGFYPVRVLPSK---------TAIAPVNPTFLPRSEDEREMCSR 276
+E+ AL L G L P+ V ++ T +P +P
Sbjct: 229 KNEDSVTQALQLTGQKLLGIPIIVQMTEAEKNRQVRTTETTSAHPNSIP---------FH 279
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMVSE 328
+Y NI VT+ D++ FE GE++ ++L D +R FV++ S+
Sbjct: 280 RLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQ 331
>gi|326505260|dbj|BAK03017.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N T+ A+ ++V R+VYV ++D T E++ F CG V I D + FA+V
Sbjct: 71 NASTAEAK-EQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYV 129
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF ++E + AL+L + L ++V P +T +
Sbjct: 130 EFLEQEAVQEALNLNESELHGRQIKVSPKRTNV 162
>gi|209877356|ref|XP_002140120.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
gi|209555726|gb|EEA05771.1| RNA recognition motif. family protein [Cryptosporidium muris RN66]
Length = 206
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
K N T D+ I+R++Y+ ++D +L LF +CG + I D + +
Sbjct: 48 KPHENMETEGPIDDDEIKRSIYIGNVDYGTKPTELQELFKSCGSINRITIMNDKRTGMPK 107
Query: 220 -FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
FA++EF + E AL G M ++V + I
Sbjct: 108 GFAYLEFCEPEAVDTALKFDGAMFRGRQIKVCSKRKNI 145
>gi|253683353|dbj|BAH84828.1| TIA-1-related RNA binding protein [Spodoptera frugiperda]
Length = 283
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 45/179 (25%), Positives = 76/179 (42%), Gaps = 23/179 (12%)
Query: 163 RMNCRTSNAQQ---DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR 219
++N TS Q D ++V D+ ++ L F G++ +CRI DP ++
Sbjct: 77 KVNWATSPGNQPKTDTSNHHHIFVGDLSPEIETHILRDAFAPFGEISNCRIVRDPQTLKS 136
Query: 220 --FAFVEFTDEEGARAAL-SLAGTMLGF------YPVRVLPSK------TAIAPVNPTFL 264
+AFV F + A AA+ ++ G LG + R PSK ++ PTF
Sbjct: 137 KGYAFVSFVKKADAEAAIQAMNGQWLGSRSIRTNWSTRKPPSKPNEGAPSSKRAKQPTF- 195
Query: 265 PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
++ + T+YC V D+ S G++Q +R+ D + AF+ F
Sbjct: 196 DEVYNQSSPTNTTVYCGGFTSNVITEDLMQNTFSQFGQIQDVRVFRDKGY----AFIRF 250
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFT 226
DE +T+YV ++D VTE + TLF G+V C+I +P + +AF+EFT
Sbjct: 3 DESHPKTLYVGNLDASVTEVFICTLFGQIGEVKGCKIIREPGND-PYAFLEFT 54
>gi|428183055|gb|EKX51914.1| hypothetical protein GUITHDRAFT_84932 [Guillardia theta CCMP2712]
Length = 616
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/197 (24%), Positives = 83/197 (42%), Gaps = 25/197 (12%)
Query: 140 GTANTNGHTTTRRKRN----GYSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVT 191
G A N H +R Y+Q K + CR +D IR++ +++ ++D+ V
Sbjct: 66 GYAYVNFHNVVDAERALDTLNYTQIKGKA-CRIMWKHRDPSIRKSGAGNIFIKNLDKTVD 124
Query: 192 EEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSLAGTMLGFYPVRVL 250
L F G ++ C++ D ++ R F FV+F E A A+S ML +
Sbjct: 125 TRTLHDTFSQFGNILSCKVSMDEHANSRGFGFVQFETAEEANEAISKVNGML------LE 178
Query: 251 PSKTAIAPVNPTFLPRSEDEREMCSR---TIYCTNIDKKVTQGDIKLFFESVCGEVQRLR 307
+ + P F+PR E E R +Y N V+ D + FE GE+ +
Sbjct: 179 DKRLFVGP----FIPRGERESTNGERRFTNVYVKNFPDNVSDDDFRKSFERY-GEITSCK 233
Query: 308 LLGDYQHSTR-IAFVEF 323
++ +++ FV F
Sbjct: 234 IMRKEDGTSKCFGFVNF 250
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 66/153 (43%), Gaps = 17/153 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL-S 236
++YV D+D VTE QL +F G V R+C D + L +A+V F + A AL +
Sbjct: 25 SLYVGDLDPNVTEPQLFEVFSVVGPVASIRVCRDAMTRRSLGYAYVNFHNVVDAERALDT 84
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L T + R++ + R R+ + I+ N+DK V + F
Sbjct: 85 LNYTQIKGKACRIM------------WKHRDPSIRKSGAGNIFIKNLDKTVDTRTLHDTF 132
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMVSE 328
S G + ++ D ++R FV+F E
Sbjct: 133 -SQFGNILSCKVSMDEHANSRGFGFVQFETAEE 164
>gi|380494250|emb|CCF33289.1| Poly(A) RNA binding protein [Colletotrichum higginsianum]
Length = 677
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 74/170 (43%), Gaps = 24/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 135 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 194
Query: 221 AFVEF-TDEEGARAALSLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + TDE ++A + G +L V V +P K R EM +
Sbjct: 195 GFVHYETDEAASQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 243
Query: 277 --TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
IY NI +VT + + F + G+V L D + +R FV F
Sbjct: 244 FTNIYIKNISGEVTDDEFRDLF-TPFGDVTSSSLARDQEGKSRGFGFVNF 292
Score = 42.4 bits (98), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + T +G +A
Sbjct: 65 SLYVGELDPSVTEAMLFELFSQIGSVASIRVCRDAVTRRSLGYAYVNYNTTSDGEKALEE 124
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 125 LNYTLIKGRPCRIMWSQ 141
>gi|357631053|gb|EHJ78771.1| hypothetical protein KGM_03904 [Danaus plexippus]
Length = 591
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/158 (27%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 229
QQ + VYV I ++ E+ + FL G + + DP + FAFVE+ E
Sbjct: 133 QQALALMCRVYVGSISFELKEDTIRQAFLPFGPIKSINMSWDPVTQKHKGFAFVEYEIPE 192
Query: 230 GARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVT 288
A+ +L + G MLG ++V+ + + P + ++E + +R IY +I ++T
Sbjct: 193 AAQLSLEQMNGVMLGGRNIKVV-GRPSNMPQAQAVIDEIQEEAKQYNR-IYVASIHPELT 250
Query: 289 QGDIKLFFESVCGEVQRLRL-LGDYQHSTR-IAFVEFA 324
+ DIK FE+ G + +L G H + F+E+A
Sbjct: 251 EDDIKNVFEAF-GPITYCKLAYGASAHKHKGYGFIEYA 287
>gi|294893752|ref|XP_002774629.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
gi|239880022|gb|EER06445.1| RNA-binding protein, putative [Perkinsus marinus ATCC 50983]
Length = 277
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGAR 232
++ +++RTVYVS + QVT E++ +F G++ + I P +FA VEF +E A+
Sbjct: 132 EEMILKRTVYVSGLANQVTLEEVRGMFGHFGEIKESSIDVSPYDQCQFALVEFQNEAAAQ 191
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A+ + VRV SK + PT
Sbjct: 192 EAIRVGEIPYRGRVVRVEKSKETVKLYPPT 221
Score = 43.1 bits (100), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 43/179 (24%), Positives = 71/179 (39%), Gaps = 36/179 (20%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAG 239
T++V ++ Q E+ L LF +V++ +I P + LR+A V+F G AA SL G
Sbjct: 7 TIFVRNLAVQANEQNLRDLFSRLDRVLNVQIMTFPGTSLRYARVDFGTSNGVTAAHSLNG 66
Query: 240 TMLGFYPVRVL--------PSKTAIAPVNPTFLP-------------------------- 265
P+ V S TA+AP+ +P
Sbjct: 67 QPFHGVPLTVSVTDPVDANASATAVAPLPNLGVPAAQQLAASVTSIRPQPGVGVTTIGGG 126
Query: 266 -RSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
R E + RT+Y + + +VT +++ F GE++ + + A VEF
Sbjct: 127 VRDSGEEMILKRTVYVSGLANQVTLEEVRGMFGH-FGEIKESSIDVSPYDQCQFALVEF 184
>gi|119186105|ref|XP_001243659.1| hypothetical protein CIMG_03100 [Coccidioides immitis RS]
gi|392870366|gb|EAS32162.2| CC1-like family splicing factor [Coccidioides immitis RS]
Length = 595
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 5/167 (2%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
KRR +DE +RTV+V + ++ ++L F G V D +I D S
Sbjct: 188 KRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 247
Query: 220 -FAFVEFTDEEGARAALSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
+VEF +EE A+ L G +LG + T S ++ +
Sbjct: 248 GVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTEGHVSGNQNSIPFHR 307
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI +T+ D++ FE GE+ ++L D +R FV+F
Sbjct: 308 LYVGNIHFSITESDLQNVFEPF-GELDFVQLQKDENGRSRGYGFVQF 353
>gi|335289034|ref|XP_003126854.2| PREDICTED: embryonic polyadenylate-binding protein 2-like [Sus
scrofa]
Length = 285
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 8/88 (9%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFT 226
Q+ E R+VYV ++D + T +L F CG++ + C + G P +A++EF
Sbjct: 145 QKVEADHRSVYVGNVDYEGTARELEAYFNHCGEIHRVTILCDKFSGHPKG---YAYIEFA 201
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKT 254
E A+AA+ L ++ ++VLP +T
Sbjct: 202 TESSAQAAVELDNSVFRGRVIKVLPKRT 229
>gi|301120388|ref|XP_002907921.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
gi|262102952|gb|EEY61004.1| polyadenylate-binding protein 1-B [Phytophthora infestans T30-4]
Length = 640
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D Q+++++L F CG + R+ DPN R F FV F T EE +A +
Sbjct: 334 LYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMN 393
Query: 239 GTMLGFYPVRV 249
G ++ PV V
Sbjct: 394 GKLISGKPVYV 404
>gi|330802792|ref|XP_003289397.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
gi|325080515|gb|EGC34067.1| hypothetical protein DICPUDRAFT_80171 [Dictyostelium purpureum]
Length = 628
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 11/132 (8%)
Query: 125 PNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQD---EVIRRTV 181
P G Y F+ +N N ++ +G+ +++ CR SN + + +
Sbjct: 129 PKGNSYGYGFVRF----SNPNESQAAIKELDGFQFQNKKLLCRLSNLYTNLNSKNPSNNL 184
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVE-FTDEEGARAALSLAG 239
++ + VT+EQL LF G++V+C++ D N +FA FV F D E A A ++ G
Sbjct: 185 FIKPLPADVTDEQLRKLFEPYGKIVECKVMLDQNGQSKFAGFVRFFNDSEAASAIDAMNG 244
Query: 240 TML--GFYPVRV 249
+ YP+ V
Sbjct: 245 IKITKDSYPLVV 256
>gi|290984354|ref|XP_002674892.1| predicted protein [Naegleria gruberi]
gi|284088485|gb|EFC42148.1| predicted protein [Naegleria gruberi]
Length = 155
Score = 46.6 bits (109), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 49/108 (45%), Gaps = 7/108 (6%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI----CGDP 214
Q + N T Q+E+ R++YV ++D E+L F G ++ I G+P
Sbjct: 12 QSEIERNLSTVAENQEEIDSRSIYVGNVDYGSVAEELENHFKQAGDIIRITIKSDKMGNP 71
Query: 215 NSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
FA++EF D+ AL L G+ ++V +T I ++ T
Sbjct: 72 KG---FAYIEFKDKSSVENALQLNGSTFRNRELKVFAKRTNIPGLSTT 116
>gi|429860108|gb|ELA34858.1| RNA splicing factor (pad-1) [Colletotrichum gloeosporioides Nara
gc5]
Length = 628
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 74/175 (42%), Gaps = 25/175 (14%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEF 225
T +DE RRTV+V + ++ L F G V + +I D S +VEF
Sbjct: 174 TPQLTEDERDRRTVFVQQLAARLRTRDLKAFFEKVGPVNEAQIVKDRISQRSKGVGYVEF 233
Query: 226 TDEEGARAALSLAGTMLGFYPV-----------RVLPSKTAIAPVNPTFLPRSEDEREMC 274
+EE AL L G L P+ +V S+TA +P +P
Sbjct: 234 KNEESVTQALQLTGQKLLGIPIIVQLTEAEKNRQVRNSETATG-AHPNSIP--------- 283
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFAMVSE 328
+Y NI VT+ D++ FE GE++ ++L D +R FV++ S+
Sbjct: 284 FHRLYVGNIHFNVTEQDLQAVFEPF-GELEFVQLQKDDNGRSRGYGFVQYREASQ 337
>gi|389583077|dbj|GAB65813.1| RNA-binding protein, partial [Plasmodium cynomolgi strain B]
Length = 213
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 2/91 (2%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEE 229
+Q+E+ R+++V ++D E+L +LF CG + I + N+ +A++EF D
Sbjct: 22 EQEEINNRSIFVGNVDYSTQPEELQSLFSECGLINRVTILVNKNTGHSKGYAYIEFADAS 81
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVN 260
R ALSL+ + ++V + I N
Sbjct: 82 SVRTALSLSESFFKKRQIKVCSKRRNIPGFN 112
>gi|326480772|gb|EGE04782.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton equinum CBS 127.97]
Length = 507
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N L + F+E+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + + + + S I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSNEVND 207
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
++ L S CG V R++ D + S FV F
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAF 242
>gi|297744588|emb|CBI37850.3| unnamed protein product [Vitis vinifera]
Length = 427
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 81/188 (43%), Gaps = 29/188 (15%)
Query: 164 MNCRTSNAQQDEVI---------RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP 214
++CR +++EV +RTV+ I + E + F G+V D R+ D
Sbjct: 13 LSCRRHKDKKEEVAEPEADPERDQRTVFAYQICLKADERDVYEFFSRAGKVRDVRLIMDR 72
Query: 215 NSVLR--FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSK--------TAIAPVNPTFL 264
NS ++EF D A++L+G L PV V PS+ T A P L
Sbjct: 73 NSRRSKGVGYIEFYDAMSVPMAIALSGQPLLGQPVMVKPSEAEKNLVQSTTAAAGGPGGL 132
Query: 265 --PRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAF 320
P S +R +Y N+ +T+ ++ FE G V+ ++L D + H F
Sbjct: 133 IGPYSGG-----ARRLYVGNLHFNITEDQLRQVFEPF-GTVELVQLPTDLETGHCKGFGF 186
Query: 321 VEFAMVSE 328
V+FA + +
Sbjct: 187 VQFARLED 194
>gi|356548971|ref|XP_003542872.1| PREDICTED: RNA-binding post-transcriptional regulator csx1-like
[Glycine max]
Length = 409
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 32/206 (15%)
Query: 135 IMHT-DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEE 193
I+ T +G NG + R +S G+R ++ D+ T++V D+ VT+
Sbjct: 123 ILQTYNGAIMPNGGQSFRLNWATFSAGER--------SRHDDSPDYTIFVGDLAADVTDY 174
Query: 194 QLATLF------LTCGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYP 246
L F + +VV R+ G + FV F+DE E RA + G + P
Sbjct: 175 LLQETFRARYNSVKGAKVVIDRLTGRTKG---YGFVRFSDESEQVRAMTEMQGVLCSTRP 231
Query: 247 VRVLPS--KTAIAPVNPTF-----LPR-SEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
+R+ P+ KT P P+ S++E + + TI+ N+D VT ++ F S
Sbjct: 232 MRIGPASNKTPTTQSQPKASYQNSQPQGSQNENDPNNTTIFVGNLDPNVTDDHLRQVF-S 290
Query: 299 VCGEVQRLRLLGDYQHSTRIAFVEFA 324
GE+ +++ R FV+FA
Sbjct: 291 QYGELVHVKIPA----GKRCGFVQFA 312
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 5/71 (7%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LA 238
T++V ++D VT++ L +F G++V +I R FV+F D A AL L
Sbjct: 270 TIFVGNLDPNVTDDHLRQVFSQYGELVHVKIPAG----KRCGFVQFADRSCAEEALRVLN 325
Query: 239 GTMLGFYPVRV 249
GT+LG VR+
Sbjct: 326 GTLLGGQNVRL 336
>gi|118350408|ref|XP_001008485.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila]
gi|89290252|gb|EAR88240.1| Splicing factor 3B subunit 4 [Tetrahymena thermophila SB210]
Length = 325
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 29/154 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDC-----RICGDPNSVLRFAFVEFTDEEGARAA 234
T+YV +DQ+VT+E L LF CG V++ +I G+ + FVE+ EE A A
Sbjct: 13 TLYVGGLDQKVTQEVLWELFSQCGIVINVHLPRDKITGEHQG---YGFVEYKTEEDADYA 69
Query: 235 LSLAGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDER-EMCSRTIYCTNIDKKVTQGD 291
+ + ++ Y P++V + S+D+R + I+ N+D VT+
Sbjct: 70 IKIL-HLIKLYGKPIKVNKA--------------SQDKRTQEVGANIFIGNLDPSVTEMQ 114
Query: 292 IKLFFESVCGEVQRLRLL--GDYQHSTRIAFVEF 323
++ F S G + R++ D S AF+ +
Sbjct: 115 LQETF-STFGLIIGRRIVRDSDNNQSKGYAFISY 147
>gi|327299776|ref|XP_003234581.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
gi|326463475|gb|EGD88928.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Trichophyton rubrum CBS 118892]
Length = 507
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 68/156 (43%), Gaps = 18/156 (11%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGA 231
E +R +YV +D +VTE+ L +F T G V +I D N L + F+E+ D A
Sbjct: 98 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNFQSKGLNYGFIEYDDPGAA 157
Query: 232 -RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQ 289
RA +L G + +R VN + + + + S I+ ++ +V
Sbjct: 158 ERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSNEVND 207
Query: 290 GDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
++ L S CG V R++ D + S FV F
Sbjct: 208 -EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAF 242
>gi|291575265|gb|ADE10198.1| ePABP2 [Cynoglossus semilaevis]
Length = 260
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEEGARA 233
R++YV ++D T ++L F CG V + C R G P FA++EF+D + ++
Sbjct: 80 RSIYVGNVDYGATADELEIHFNACGPVNRVTILCDRFSGHPKG---FAYIEFSDRDSVQS 136
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
A+ L T+ ++VLP +T + ++ T
Sbjct: 137 AIGLHETLFRGRVLKVLPKRTNMPGISTT 165
>gi|406859894|gb|EKD12956.1| RNA recognition domain-containing protein [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1039
Score = 46.6 bits (109), Expect = 0.016, Method: Composition-based stats.
Identities = 54/206 (26%), Positives = 90/206 (43%), Gaps = 22/206 (10%)
Query: 128 FGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIR------RTV 181
+G+ NN + T+ + TT + + + + + + R D IR T+
Sbjct: 600 YGHLNNITLRTEADKQS---TTAMAEFSTHEEAQSAL-LRDGKYFGDRQIRVTPGTGLTL 655
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLAGT 240
YV++ E L LF CG++ R NS RF ++ F + A AA L G
Sbjct: 656 YVTNYPPTADENYLRKLFKECGEIFSIRWPSLKVNSHRRFCYISFRTVDAAAAATKLDGQ 715
Query: 241 MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDIKLFFESV 299
LG + L +K + P R + + + R I+ T+ID +T +++ F S
Sbjct: 716 SLG--GMYKLVAKHSDPP------NRQKRQGALAEGREIHVTSIDPSITPDELEKLF-SK 766
Query: 300 CGEVQRLRLLGDYQHSTR-IAFVEFA 324
G+V+R+ LL ++ AFV FA
Sbjct: 767 YGKVERVNLLTKVSGESKGAAFVSFA 792
Score = 40.8 bits (94), Expect = 0.89, Method: Composition-based stats.
Identities = 31/94 (32%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQV----VDCRICGDPNSVLRFAFVEFTDEEGARAA 234
R ++V+ ID +T ++L LF G+V + ++ G+ AFV F +EGA AA
Sbjct: 744 REIHVTSIDPSITPDELEKLFSKYGKVERVNLLTKVSGESKGA---AFVSFATKEGAAAA 800
Query: 235 LSLAGTMLGFYPVRV-LPSKTAIAPVNPTFLPRS 267
L L T L + V + T P TF RS
Sbjct: 801 LDLDKTKLKSRVLNVEMAGATNFKPTATTFSKRS 834
>gi|403416100|emb|CCM02800.1| predicted protein [Fibroporia radiculosa]
Length = 433
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 27/157 (17%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
V+V D+ +V +E L F G + D R+ D NS + F+ F D+ A A+ ++
Sbjct: 109 VFVGDLSPEVNDEVLGKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKTDAEQAIATM 168
Query: 238 AGTMLGFYPVRV---------LPSKT----------AIAPVNPTFLPRSED----EREMC 274
G LG +RV PS T A AP+N P S + +
Sbjct: 169 NGEWLGSRAIRVNWANQKTQGGPSPTMPGRPSGMGGAPAPINFQGGPLSYESVVQQTPAY 228
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+ T+Y N+ TQ D+ F+S+ G + +R+ D
Sbjct: 229 NTTVYVGNLVPYCTQADLIPLFQSI-GYLSEIRMQAD 264
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 29/61 (47%), Gaps = 3/61 (4%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN---SVLRFAFVEFTDEEGARAA 234
R +YV ++ +VTE L +F G V +I D N L + FVE+ D A A
Sbjct: 15 RAHLYVGNLSPRVTEYMLTEIFAVAGPVQHVKIIPDRNYQHGGLNYGFVEYMDMRAAETA 74
Query: 235 L 235
L
Sbjct: 75 L 75
>gi|320163233|gb|EFW40132.1| RNA binding domain-containing protein 39 [Capsaspora owczarzaki
ATCC 30864]
Length = 600
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGT 240
VYV +D +TE + +LF CG+V+ + D +AFV+F D A+ A+ L G
Sbjct: 357 VYVGSLDFALTEADVKSLFSPCGEVISVTLNRDNGKSKGYAFVQFADAGAAKLAMELNGV 416
Query: 241 MLGFYPVRV 249
+ P++V
Sbjct: 417 EVAGRPLKV 425
>gi|303318024|ref|XP_003069014.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240108695|gb|EER26869.1| splicing factor, CC1-like family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|320036831|gb|EFW18769.1| RNA splicing factor [Coccidioides posadasii str. Silveira]
Length = 593
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 44/167 (26%), Positives = 71/167 (42%), Gaps = 5/167 (2%)
Query: 161 KRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR- 219
KRR +DE +RTV+V + ++ ++L F G V D +I D S
Sbjct: 186 KRRSKTPEPQLTEDERDKRTVFVQQLAARLRTKELIAFFEKAGPVKDAQIVKDRVSGRSK 245
Query: 220 -FAFVEFTDEEGARAALSLAG-TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
+VEF +EE A+ L G +LG + T S ++ +
Sbjct: 246 GVGYVEFKNEESVPLAIQLTGQKLLGIPIIAQFTEAEKNKAARNTEGHVSGNQNSIPFHR 305
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI +T+ D++ FE GE+ ++L D +R FV+F
Sbjct: 306 LYVGNIHFSITESDLQNVFEPF-GELDFVQLQKDENGRSRGYGFVQF 351
>gi|410975075|ref|XP_003993961.1| PREDICTED: LOW QUALITY PROTEIN: RNA-binding protein 34 [Felis
catus]
Length = 433
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 70/139 (50%), Gaps = 16/139 (11%)
Query: 132 NNFIMHTDGTANTNGHTTTRRKRNG--YSQGKR-RMNCRTSNAQQDEVIRRTVYVSDIDQ 188
N +++ D +A T KRNG ++ G R R++ + + +D +R+V+V ++
Sbjct: 250 NAYVVFKDESAATKAL-----KRNGTQFADGFRVRVDLASETSSRD---KRSVFVGNLPY 301
Query: 189 QVTEEQLATLFLTCGQVVDCRICGDPNS-VLR-FAFVEFTDEEGARAALSLAGTMLGFYP 246
+V E + FL CG +V RI DP + V R F +V F + + AL L + L
Sbjct: 302 KVEESAIEEHFLDCGSIVAVRIVRDPATGVGRGFGYVLFENTDAVHLALKLNNSELMGRK 361
Query: 247 VRVLPS--KTAIAP-VNPT 262
+RV+ S K + P NP+
Sbjct: 362 LRVMRSVNKEKLKPNSNPS 380
>gi|407920118|gb|EKG13336.1| hypothetical protein MPH_09618 [Macrophomina phaseolina MS6]
Length = 768
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 74/169 (43%), Gaps = 21/169 (12%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 128 CRIMWSQRDPALRKTGQGNVFIKNLDGAIDNKALHDTFAAFGNILSCKVAQDENGNSKGY 187
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ ++ G +L V V +P K ++ +E +
Sbjct: 188 GFVHYETAEAANNAIKAVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 238
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
+Y NID +VT + + FE G++ L D + S FV F
Sbjct: 239 NVYVKNIDLEVTDDEFRELFEKY-GQITSASLAHDNETGKSRGFGFVNF 286
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + ++G +A
Sbjct: 58 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSDDGEKALEE 117
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 118 LNYTLIKGKPCRIMWSQ 134
>gi|156058654|ref|XP_001595250.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980]
gi|154701126|gb|EDO00865.1| hypothetical protein SS1G_03339 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 501
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +YV +D +VTEE L +F T G V + +I D NS + FVE+ D A
Sbjct: 85 EPNKRALYVGGLDPRVTEEVLRQIFETTGHVQNVKIIPDKNSKGFNYGFVEYDDPGAAER 144
Query: 234 AL 235
A+
Sbjct: 145 AM 146
>gi|169771151|ref|XP_001820045.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|317144326|ref|XP_003189588.1| polyadenylate-binding protein, cytoplasmic and nuclear [Aspergillus
oryzae RIB40]
gi|121923334|sp|Q2UK72.1|PABP_ASPOR RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|83767904|dbj|BAE58043.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391872693|gb|EIT81794.1| polyadenylate-binding protein [Aspergillus oryzae 3.042]
Length = 765
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 CRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 179
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 180 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 232
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
Y NID+ VT+ + + FE GE+ L D + +R FV F+
Sbjct: 233 YIKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNFS 278
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 110 LNYTLIKGKPCRIMWSQ 126
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
VY+ +IDQ VTEE+ LF G++ + D R F FV F+ E A+AA+
Sbjct: 232 VYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAV 287
>gi|332374002|gb|AEE62142.1| unknown [Dendroctonus ponderosae]
Length = 634
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/169 (21%), Positives = 74/169 (43%), Gaps = 22/169 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D N + +
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDRSIDNKAMYDTFSAFGNILSCKVAQDENGTSKGY 141
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 142 GFVHFETEEAANKSIEKVNGML-------LNGKKVYV---GRFIPRKEREKELGEKAKLF 191
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLG-DYQHSTRIAFVEF 323
+Y N + +++ ++ FE G++ +++ D S FV F
Sbjct: 192 TNVYVKNFGEDLSEEQLRNMFEKF-GKITSYKVMSKDDGKSKGFGFVAF 239
>gi|294939182|ref|XP_002782349.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
gi|239893941|gb|EER14144.1| RNA-binding motif, single-stranded-interacting protein, putative
[Perkinsus marinus ATCC 50983]
Length = 266
Score = 46.6 bits (109), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 44/84 (52%), Gaps = 6/84 (7%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR + +D +RR+ VYV ++D+ + + L F G ++ C++ P+ R F
Sbjct: 119 CRLMWSHRDPALRRSGAGNVYVKNLDRNIDNKALYDTFSLFGNILSCKVALTPDGKSRGF 178
Query: 221 AFVEFTDEEGARAALS-LAGTMLG 243
FV F +E A AA++ L G +G
Sbjct: 179 GFVHFESDESAEAAIAKLNGMQIG 202
>gi|147845244|emb|CAN83373.1| hypothetical protein VITISV_028295 [Vitis vinifera]
Length = 443
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 59/132 (44%), Gaps = 11/132 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
+V R ++V + T E L F GQ+ DC + D N+ + FV F +GA
Sbjct: 88 DVSHRKIFVHGLGWDTTRETLLAAFEPYGQIEDCNVVTDRNTGKAKGYGFVLFKTRQGAV 147
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
AL G + +++ +A + P+ P+S+D R IY +N+ V +
Sbjct: 148 KALKQPGKK-----INNRMTQSQLASMGPSPPPQSQDT---VGRKIYVSNVQADVDPERL 199
Query: 293 KLFFESVCGEVQ 304
+ FF GE++
Sbjct: 200 RSFFAKF-GEIE 210
>gi|260803001|ref|XP_002596380.1| hypothetical protein BRAFLDRAFT_215468 [Branchiostoma floridae]
gi|229281635|gb|EEN52392.1| hypothetical protein BRAFLDRAFT_215468 [Branchiostoma floridae]
Length = 85
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 46/81 (56%), Gaps = 3/81 (3%)
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEE-GAR 232
V R +YV +D ++TE+ + T F GQ+VDC++ D + FAFV F+DE+ AR
Sbjct: 2 VDRTKLYVGGLDFRMTEDDVYTAFSDHGQIVDCKLITDRETGKSRGFAFVTFSDEDSAAR 61
Query: 233 AALSLAGTMLGFYPVRVLPSK 253
A +L T LG + V +K
Sbjct: 62 AEKALDQTELGTRVINVSVAK 82
>gi|224094731|ref|XP_002310211.1| predicted protein [Populus trichocarpa]
gi|222853114|gb|EEE90661.1| predicted protein [Populus trichocarpa]
Length = 184
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 41/74 (55%), Gaps = 5/74 (6%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 7 TAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKV 66
Query: 238 AGTMLGFY--PVRV 249
M+ Y P+RV
Sbjct: 67 L-NMIKLYGKPIRV 79
>gi|238486326|ref|XP_002374401.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
gi|220699280|gb|EED55619.1| polyadenylate-binding protein [Aspergillus flavus NRRL3357]
Length = 713
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 120 CRIMWSQRDPALRKTGQGNVFIKNLDSAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 179
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 180 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 232
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
Y NID+ VT+ + + FE GE+ L D + +R FV F+
Sbjct: 233 YIKNIDQDVTEEEFRELFEKF-GEITSATLSRDQEGKSRGFGFVNFS 278
Score = 45.4 bits (106), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 50 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 109
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 110 LNYTLIKGKPCRIMWSQ 126
Score = 43.1 bits (100), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%), Gaps = 1/56 (1%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
VY+ +IDQ VTEE+ LF G++ + D R F FV F+ E A+AA+
Sbjct: 232 VYIKNIDQDVTEEEFRELFEKFGEITSATLSRDQEGKSRGFGFVNFSTHESAQAAV 287
>gi|119618468|gb|EAW98062.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
gi|119618469|gb|EAW98063.1| RNA binding motif protein 19, isoform CRA_a [Homo sapiens]
Length = 777
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE+L +F G V C I N + F FVE+ E A+ A
Sbjct: 548 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGVLLSMGFGFVEYRKPEQAQKA 607
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P T + + R+ + I NI + +I+
Sbjct: 608 LKQLQGHVVDGHKLEVRISERATKPAV-TLARKKQVPRKQTTSKILVRNIPFQAHSREIR 666
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 667 ELF-STFGELKTVRL 680
>gi|402593376|gb|EJW87303.1| hypothetical protein WUBG_01785 [Wuchereria bancrofti]
Length = 375
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 28/155 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T+YV +D++VT+ L LF+ G VV + D +S F F+EF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P++V + S E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 295 FFES-----VCGEVQRLRLLGDYQHSTRIAFVEFA 324
F++ V +V ++ + +S AFV FA
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFA 150
>gi|328873603|gb|EGG21970.1| hypothetical protein DFA_01856 [Dictyostelium fasciculatum]
Length = 568
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 79/160 (49%), Gaps = 8/160 (5%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN--SVLRFAFVEFTDEEGAR 232
EV V+V + + TE+ L LFL G +++ ++ + S L + FV F++ A+
Sbjct: 11 EVDECNVFVKYLPCEYTEKDLFNLFLPHGSIINTKVMVNTKTGSSLGYGFVRFSEPSNAK 70
Query: 233 AALSLAGTM-LGFYPVRVLPSKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A++ + +G+ + SK + APV NP+ + + R+ S +IY + +T
Sbjct: 71 DAVAKMNRLQIGYKTLLCKLSKPSQAPVINPSNMVEDTEPRD-PSASIYVRVLSPTITDA 129
Query: 291 DIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
++ FE G+V ++L D S R +V FA ++E
Sbjct: 130 QLRAAFEPF-GDVIESQVLIDQASGKSKRSGYVRFANITE 168
>gi|158563873|sp|Q5B630.2|PABP_EMENI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|259481418|tpe|CBF74916.1| TPA: Polyadenylate-binding protein, cytoplasmic and nuclear
(Poly(A)-binding protein)(PABP)(Polyadenylate
tail-binding protein)
[Source:UniProtKB/Swiss-Prot;Acc:Q5B630] [Aspergillus
nidulans FGSC A4]
Length = 732
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + D G RA
Sbjct: 43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 103 LNYTLIKGKPCRIMWSQ 119
>gi|145478851|ref|XP_001425448.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392518|emb|CAK58050.1| unnamed protein product [Paramecium tetraurelia]
Length = 232
Score = 46.6 bits (109), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/131 (26%), Positives = 61/131 (46%), Gaps = 11/131 (8%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALSLA 238
V++S + +E + +LF CG+++ ++ D N +L + + F+D E + AL+L
Sbjct: 4 VFISGLPYTASENDVQSLFEDCGEILSIKLPRYQDSNRLLGYGHITFSDSEAIQKALALN 63
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
GT LG + V +K P P P C TI+ N+ + I F
Sbjct: 64 GTQLGGRYIDVKEAK-GTQPQKPNVPPPD------C-LTIFVKNLSYDLNADQIGDSFRP 115
Query: 299 VCGEVQRLRLL 309
CG+V +R++
Sbjct: 116 -CGKVANVRMV 125
>gi|115491713|ref|XP_001210484.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
gi|114197344|gb|EAU39044.1| hypothetical protein ATEG_00398 [Aspergillus terreus NIH2624]
Length = 478
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 231 A-RAALSLAGTMLGFYPVRV 249
A RA +L G + +RV
Sbjct: 147 AERAMQTLNGRRIHQSEIRV 166
>gi|297674344|ref|XP_002815190.1| PREDICTED: polyadenylate-binding protein 4-like [Pongo abelii]
Length = 428
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 50/192 (26%), Positives = 82/192 (42%), Gaps = 34/192 (17%)
Query: 137 HTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLA 196
H D + ++ G T + + R K RM ++YV D+ VTE+ L
Sbjct: 40 HRDCSKSSRGQTHSGKDREMNVAAKYRMA--------------SLYVGDLHADVTEDLLF 85
Query: 197 TLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSK 253
F T G V+ RIC D L +A+V F A+ AL ++ ++ +R++ S+
Sbjct: 86 RKFSTVGPVLSIRICRDQVTRRSLGYAYVNFLQLADAQKALDTMNFDIIKGKSIRLMWSQ 145
Query: 254 TAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGD 311
+L RS ++ N+DK + D K +E S G++ +++ D
Sbjct: 146 ------RDAYLRRS------GIGNVFIKNLDKSI---DNKTLYEHFSAFGKILSSKVMSD 190
Query: 312 YQHSTRIAFVEF 323
Q S AFV F
Sbjct: 191 DQGSKGYAFVHF 202
>gi|71749032|ref|XP_827855.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70833239|gb|EAN78743.1| RNA-binding protein, putative [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261333587|emb|CBH16582.1| RNA-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 377
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 37/72 (51%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
Y+ +ID+ VT E L +F CG +VDC + G R+ F++F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGTIVDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFT 71
Query: 242 LGFYPVRVLPSK 253
L ++V SK
Sbjct: 72 LAGRKIKVGISK 83
>gi|395829049|ref|XP_003787673.1| PREDICTED: polyadenylate-binding protein 1-like [Otolemur
garnettii]
Length = 611
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 78/170 (45%), Gaps = 25/170 (14%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ +++ +++ + + L F T G ++ C++ D + F
Sbjct: 82 IRIMWSQRDPGLRKSGVGNIFIKNLEASIDNKALYDTFSTFGNILSCKVACDEHGSRGFG 141
Query: 222 FVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYC 280
FV F E A+ A+ ++ G +L + V V F R E E E+ +R +
Sbjct: 142 FVHFETHEAAQHAINTMNGMLLNDHKVFV-----------GHFKSRREREVELGARAMEF 190
Query: 281 TNIDKKVTQGDI------KLFFESVCGEVQRLRLLGDYQ-HSTRIAFVEF 323
TNI K Q D+ +LF S G++ ++++ D HS FV F
Sbjct: 191 TNIYVKNLQADVDEQGLQELF--SQFGKMLSVKVMRDSSGHSRGFGFVNF 238
>gi|449513137|ref|XP_004164242.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFT 226
S A ++E R+V+V ++D T E++ F +CG V I D + FA+VEF
Sbjct: 75 ASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFL 134
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
+ E + AL L + L ++VLP +T +
Sbjct: 135 EAEAVQEALVLNESELHGRQLKVLPKRTNV 164
>gi|268569444|ref|XP_002640524.1| Hypothetical protein CBG18686 [Caenorhabditis briggsae]
Length = 84
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%), Gaps = 8/61 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEEGARAA 234
+VYV ++ QV+EE++ F + G V + RI G P FAFVEFTDE GA+ A
Sbjct: 7 SVYVGNVPYQVSEEEIGQWFSSVGVVNNVRIVFDRETGRPRG---FAFVEFTDEAGAQRA 63
Query: 235 L 235
+
Sbjct: 64 V 64
>gi|296423176|ref|XP_002841131.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637365|emb|CAZ85322.1| unnamed protein product [Tuber melanosporum]
Length = 498
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +D +VTEE L +F T G V + +I D NS + F+E+ D A R
Sbjct: 82 EPNKRALYVGGLDPRVTEEILKQIFETTGHVQNVKIIPDKNSKGYNYGFIEYDDPGAAER 141
Query: 233 AALSLAGTMLGFYPVRV 249
A +L G + +RV
Sbjct: 142 AMQTLNGRRIHQAEIRV 158
>gi|193678811|ref|XP_001952437.1| PREDICTED: polyadenylate-binding protein 2-like isoform 1
[Acyrthosiphon pisum]
Length = 246
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFV 223
S ++ E R+VYV ++D T E+L T F CG + I G P FA++
Sbjct: 102 SEQEKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKG---FAYI 158
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
EF D + A+++ ++ ++V P +T ++ T P + R M
Sbjct: 159 EFADMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAM 208
>gi|170034902|ref|XP_001845311.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
gi|167876604|gb|EDS39987.1| heterogeneous nuclear ribonucleoprotein r [Culex quinquefasciatus]
Length = 542
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 67/146 (45%), Gaps = 24/146 (16%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSLA 238
V+ I + + E++L LF CG++ D R+ DP + +AFV FT + A A+
Sbjct: 181 VFCGKIPKDMYEDELIPLFEKCGKIWDLRLMMDPMTGTNRGYAFVTFTSRDAACNAVR-- 238
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDIKLFFE 297
V + +P P DE+ M + +Y N+ + ++ +K FE
Sbjct: 239 ---------EVWGCDIIVDWADPQEEP---DEQTMSKVKVLYVRNLTQDTSEEKLKESFE 286
Query: 298 SVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ G+V+R++ + DY AFV F
Sbjct: 287 AF-GKVERVKKIKDY------AFVHF 305
>gi|33504432|emb|CAD43730.1| putative poly(A)-binding protein [Mangifera indica]
Length = 130
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 16 LYMKNLDDSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEASRAILEMN 75
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 76 GKMVVSKPLFV 86
>gi|156554641|ref|XP_001605226.1| PREDICTED: probable splicing factor, arginine/serine-rich 7-like
[Nasonia vitripennis]
Length = 501
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-QVVDCRICGDPNSVLRFAFVEFTDE 228
++++ E IRRT+ V ++D T++QL F +V R+C + +A VEF+++
Sbjct: 157 DSRKIEEIRRTLVVGNLDASTTDQQLIEFFGNHNVEVKYTRLCTRDSDTDHYALVEFSEQ 216
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAI 256
AL L G ML P+++ S AI
Sbjct: 217 ASIVPALQLNGQMLNDRPIKIGHSVQAI 244
>gi|395335144|gb|EJF67520.1| hypothetical protein DICSQDRAFT_164378 [Dichomitus squalens
LYAD-421 SS1]
Length = 395
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 72/165 (43%), Gaps = 26/165 (15%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEE 229
++D V+V D+ +V ++ LA F G + D R+ D NS + F+ F D+
Sbjct: 70 KEDTSNHYHVFVGDLSPEVNDDVLAKAFSAFGTLSDARVMWDMNSGKSRGYGFLAFRDKT 129
Query: 230 GARAALS-LAGTMLGFYPVRV-------------LPSKT-----AIAPVNPTFLPRSED- 269
A A++ + G LG +RV P +T A AP+N P S +
Sbjct: 130 DAEQAIATMNGEWLGSRAIRVNWANQKTQGAPPAGPPRTGMGGGAPAPMNFQGGPLSYES 189
Query: 270 ---EREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGD 311
+ + T+Y N+ TQ D+ F+S+ G + +R+ D
Sbjct: 190 VVQQTPAYNTTVYVGNLVPYATQADLIPLFQSI-GYLSEIRMQAD 233
>gi|67539668|ref|XP_663608.1| hypothetical protein AN6004.2 [Aspergillus nidulans FGSC A4]
gi|40738563|gb|EAA57753.1| hypothetical protein AN6004.2 [Aspergillus nidulans FGSC A4]
gi|259479813|tpe|CBF70379.1| TPA: actin cytoskeleton protein (VIP1), putative (AFU_orthologue;
AFUA_2G10030) [Aspergillus nidulans FGSC A4]
Length = 270
Score = 46.6 bits (109), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 44/80 (55%), Gaps = 4/80 (5%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI---CGDPNSVLRFAFVEFTDEEGARAA 234
R TV+VS+ID +E+++ F CG++V + G+P S L+ A V F + A+ A
Sbjct: 4 RTTVHVSNIDPSTSEKEVQDFFSFCGKIVSISVTPTSGEPGS-LKSATVTFEKDAAAKTA 62
Query: 235 LSLAGTMLGFYPVRVLPSKT 254
L L T LG V V ++T
Sbjct: 63 LLLDQTQLGPSVVTVKAAQT 82
>gi|213623852|gb|AAI70311.1| LOC403372 protein [Xenopus laevis]
Length = 218
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFV 223
S ++ E+ +R+VYV ++D T + L F +CG + + C + G P +A++
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
EF + AA+++ T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+E+++E+ R++Y N+D T D++ F S CG + R+ +L D H A++EFA
Sbjct: 84 AEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS-CGSINRITILCDKFSGHPKGYAYIEFA 142
>gi|195110141|ref|XP_001999640.1| GI22960 [Drosophila mojavensis]
gi|193916234|gb|EDW15101.1| GI22960 [Drosophila mojavensis]
Length = 475
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 38/63 (60%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 41/81 (50%), Gaps = 3/81 (3%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL-SL 237
++V D+ ++ E L F G++ +CRI DP+++ +AFV F + A A+ S+
Sbjct: 97 IFVGDLSPEIETETLREAFAPFGEISNCRIVRDPHTMKSKGYAFVSFVKKAEAENAIQSM 156
Query: 238 AGTMLGFYPVRVLPSKTAIAP 258
G +G +R S + P
Sbjct: 157 NGQWIGSRNIRTNWSTRKLPP 177
>gi|389637036|ref|XP_003716159.1| hypothetical protein MGG_03722 [Magnaporthe oryzae 70-15]
gi|351641978|gb|EHA49840.1| hypothetical protein MGG_03722 [Magnaporthe oryzae 70-15]
gi|440469252|gb|ELQ38369.1| hypothetical protein OOU_Y34scaffold00542g61 [Magnaporthe oryzae
Y34]
gi|440486718|gb|ELQ66557.1| hypothetical protein OOW_P131scaffold00378g26 [Magnaporthe oryzae
P131]
Length = 648
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 162 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-- 219
RR + + Q EV RR+V+V ++ + +TEEQ+A LF G V +I + +
Sbjct: 350 RRHDADEAYLTQYEVDRRSVFVGNLPRDITEEQVADLFSAIGTVNRVQIIKRTGTTIEQP 409
Query: 220 FAFVEFTDEEGARAALS 236
FAF+EF + AA++
Sbjct: 410 FAFIEFDRPDTPEAAIA 426
>gi|50414059|ref|XP_457358.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
gi|49653023|emb|CAG85362.1| DEHA2B09372p [Debaryomyces hansenii CBS767]
Length = 190
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 44/87 (50%), Gaps = 3/87 (3%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDE 228
A+Q+E+ R+VYV ++D Q T EQL + F G + I D S L +A+VEF
Sbjct: 46 AKQEEIDSRSVYVGNVDYQSTPEQLESFFKAVGVIERITILFDKYSGLPKGYAYVEFEIP 105
Query: 229 EGARAAL-SLAGTMLGFYPVRVLPSKT 254
E A+ L G +RV P +T
Sbjct: 106 ESVEKAIEELHGKEFRGRDLRVTPKRT 132
>gi|449458283|ref|XP_004146877.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
Length = 212
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFT 226
S A ++E R+V+V ++D T E++ F +CG V I D + FA+VEF
Sbjct: 75 ASQAGKEETDSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFL 134
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
+ E + AL L + L ++VLP +T +
Sbjct: 135 EAEAVQEALVLNESELHGRQLKVLPKRTNV 164
>gi|318087014|gb|ADV40099.1| TIA-1-like protein [Latrodectus hesperus]
Length = 166
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 172 QQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGA 231
Q +E +T+YV ++D VTEE + LF G V +I +P + + FVEFTD + A
Sbjct: 23 QSNESHPKTLYVGNLDPTVTEELILALFGQIGPVKGYKIIQEPGND-PYCFVEFTDHQSA 81
Query: 232 RAAL 235
AAL
Sbjct: 82 AAAL 85
>gi|312374824|gb|EFR22303.1| hypothetical protein AND_15459 [Anopheles darlingi]
Length = 560
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 44/101 (43%), Gaps = 4/101 (3%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
RR R GY G R Q++ RTV+ + Q++ L F + G+V D R+
Sbjct: 179 RRGRGGY--GSYRDRTPGDEVSQEDRDARTVFCMQLSQRIRARDLEEFFSSVGKVRDVRL 236
Query: 211 --CGDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRV 249
C A++EF D E AL L+G L P+ V
Sbjct: 237 ITCNKTKRFKGIAYIEFKDPESVALALGLSGQRLLGIPISV 277
>gi|301125993|ref|XP_002909814.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
gi|262103703|gb|EEY61755.1| polyadenylate-binding protein, putative [Phytophthora infestans
T30-4]
Length = 587
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D Q+++++L F CG + R+ DPN R F FV F T EE +A +
Sbjct: 280 LYVKNLDDQLSDDELREAFAECGTITSSRVMRDPNGNSRGFGFVCFSTPEEANKAVAEMN 339
Query: 239 GTMLGFYPVRV 249
G ++ PV V
Sbjct: 340 GKLISGKPVYV 350
>gi|444721742|gb|ELW62457.1| Polyadenylate-binding protein 4-like protein [Tupaia chinensis]
Length = 370
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/154 (27%), Positives = 69/154 (44%), Gaps = 30/154 (19%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE+ L F T G V+ RIC D L +A+V F A+ AL +
Sbjct: 11 SLYVGDLSADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLQLADAQKALDT 70
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-----IYCTNIDKKVTQGD 291
+ M+ +R++ S +R+ C R ++ N+D+ + D
Sbjct: 71 MNFDMIKGKSIRLMWS-----------------QRDACLRKSGIGNVFIKNLDRSI---D 110
Query: 292 IKLFFE--SVCGEVQRLRLLGDYQHSTRIAFVEF 323
K +E S G++ +++ D Q S AFV F
Sbjct: 111 NKTLYEHFSAFGKILSSKVMSDDQGSKGYAFVHF 144
>gi|358383610|gb|EHK21274.1| hypothetical protein TRIVIDRAFT_116557, partial [Trichoderma virens
Gv29-8]
Length = 466
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 69/154 (44%), Gaps = 16/154 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 73 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 132
Query: 233 AALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDKKVTQGD 291
A +L G + +R VN + + + + + I+ ++ +V D
Sbjct: 133 AMQTLNGRRVHQSEIR----------VNWAYQSNTTSKEDTSNHFHIFVGDLSNEVND-D 181
Query: 292 IKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
I L S G V R++ D + S FV F
Sbjct: 182 ILLQAFSAFGSVSEARVMWDMKTGRSRGYGFVAF 215
>gi|67527154|ref|XP_661604.1| hypothetical protein AN4000.2 [Aspergillus nidulans FGSC A4]
gi|40740281|gb|EAA59471.1| conserved hypothetical protein [Aspergillus nidulans FGSC A4]
Length = 711
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + D G RA
Sbjct: 43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 103 LNYTLIKGKPCRIMWSQ 119
>gi|195573327|ref|XP_002104645.1| GD18328 [Drosophila simulans]
gi|194200572|gb|EDX14148.1| GD18328 [Drosophila simulans]
Length = 824
Score = 46.2 bits (108), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 23/63 (36%), Positives = 39/63 (61%), Gaps = 1/63 (1%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF T G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDSSVSEDLLIALFSTMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALS 236
AL+
Sbjct: 61 ALT 63
>gi|346319566|gb|EGX89167.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Cordyceps militaris CM01]
Length = 450
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A
Sbjct: 66 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAAER 125
Query: 234 AL 235
A+
Sbjct: 126 AM 127
>gi|326518878|dbj|BAJ92600.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 246
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 51/110 (46%), Gaps = 8/110 (7%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFV 223
S ++ E R+VYV ++D T E+L T F CG + I G P FA++
Sbjct: 102 SEQEKAEADARSVYVGNVDYAATAEELETHFHGCGSINRVTILCNKFDGHPKG---FAYI 158
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM 273
EF D + A+++ ++ ++V P +T ++ T P + R M
Sbjct: 159 EFADMDSVNTAMAMDDSLFRGRQIKVNPKRTNKPGISTTNRPVASRGRAM 208
>gi|320585953|gb|EFW98632.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Grosmannia clavigera kw1407]
Length = 488
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A
Sbjct: 83 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 142
Query: 234 AL 235
A+
Sbjct: 143 AM 144
>gi|241622203|ref|XP_002408913.1| RNA-binding protein musashi, putative [Ixodes scapularis]
gi|215503069|gb|EEC12563.1| RNA-binding protein musashi, putative [Ixodes scapularis]
Length = 266
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 40/73 (54%), Gaps = 2/73 (2%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL--RFAFVEFTDEEGARAAL 235
R++V+V ++ +V +E+L F CGQV R+ D + + F FV F+ + A AL
Sbjct: 150 RKSVFVGNLPHEVQDEELWNCFSECGQVTGVRVIRDRETGMGKGFGFVTFSKLDAAALAL 209
Query: 236 SLAGTMLGFYPVR 248
++G + P+R
Sbjct: 210 EMSGIHMSGRPIR 222
>gi|452001105|gb|EMD93565.1| hypothetical protein COCHEDRAFT_1096208 [Cochliobolus
heterostrophus C5]
Length = 749
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + E+G +A
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 109 LNYTVIKGKPCRIMWSQ 125
>gi|1616770|gb|AAB16848.1| putative poly(A)-binding protein FabM [Emericella nidulans]
Length = 705
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 41/77 (53%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + D G RA
Sbjct: 43 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNDTAHGERALDE 102
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 103 LNYTLIKGKPCRIMWSQ 119
>gi|400595086|gb|EJP62896.1| RNA recognition domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 468
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 64 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGFNYGFVEYDDPGAADR 123
Query: 233 AALSLAGTMLGFYPVRV 249
A +L G + +RV
Sbjct: 124 AMQTLNGRRVHQSEIRV 140
>gi|297802580|ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297315010|gb|EFH45433.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 625
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 17/149 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTD-EEGARAALS 236
++YV D+D VT+ QL F G VV R+C D L + +V FT+ ++ ARA
Sbjct: 37 SLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVNFTNPQDAARAIQE 96
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L L P+RV+ S R R + I+ N+D+ + + F
Sbjct: 97 LNYIPLYGKPIRVMYSH------------RDPSVRRSGAGNIFIKNLDESIDHKALHDTF 144
Query: 297 ESVCGEVQRLRLLGDYQ-HSTRIAFVEFA 324
SV G + ++ D S FV++A
Sbjct: 145 -SVFGNIVSCKVAVDSSGQSKGYGFVQYA 172
Score = 45.4 bits (106), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 71/164 (43%), Gaps = 24/164 (14%)
Query: 126 NGFGYTN--NFIMHTDGTANTNGHTTTRRKRN-GYSQGK--RRMNCRTSNAQQ-----DE 175
GFG+ N N + NGH ++ G +Q K R R Q D+
Sbjct: 255 KGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSERETELRVRYEQNLKEAADK 314
Query: 176 VIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFTDEEGARAA 234
+YV ++D +++E+L +F G V C++ DPN + + FV F+ E A A
Sbjct: 315 FQSSNLYVKNLDPSISDEKLKEIFSPFGTVTSCKVMRDPNGTSKGSGFVAFSTPEEATEA 374
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT 277
+S L+G M+ P+ V AIA R ED R S+
Sbjct: 375 MSQLSGKMIESKPLYV-----AIA-------QRKEDRRAQFSQV 406
Score = 42.7 bits (99), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 34/141 (24%), Positives = 65/141 (46%), Gaps = 22/141 (15%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R + +D +RR+ +++ ++D+ + + L F G +V C++ D + + +
Sbjct: 107 IRVMYSHRDPSVRRSGAGNIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVDSSGQSKGY 166
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT-- 277
FV++ +EE A+ A+ L G +L V V P FL R E + ++T
Sbjct: 167 GFVQYANEESAQKAIEKLNGMLLNDKQVYVGP-----------FLRRQERD-STANKTKF 214
Query: 278 --IYCTNIDKKVTQGDIKLFF 296
+Y N+ + T D+K F
Sbjct: 215 TNVYVKNLAESTTDDDLKNAF 235
>gi|225559592|gb|EEH07874.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Ajellomyces capsulatus G186AR]
Length = 290
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 35/63 (55%), Gaps = 1/63 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +Y+ +D +VTE+ L +F T G V +I D NS L + FVE+ D A
Sbjct: 88 EPNKRALYIGGLDARVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 234 ALS 236
A+S
Sbjct: 148 AMS 150
>gi|358397912|gb|EHK47280.1| hypothetical protein TRIATDRAFT_165657, partial [Trichoderma
atroviride IMI 206040]
Length = 465
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 72 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAADR 131
Query: 233 AALSLAGTMLGFYPVRV 249
A +L G + +RV
Sbjct: 132 AMATLNGRRVHQSEIRV 148
>gi|327289636|ref|XP_003229530.1| PREDICTED: embryonic polyadenylate-binding protein 2-like, partial
[Anolis carolinensis]
Length = 262
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 50/93 (53%), Gaps = 8/93 (8%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFVEFTDEE 229
E +R++YV ++D T EQL + F CG++ + C + G P +A++EF D+
Sbjct: 137 EADQRSIYVGNVDYGGTAEQLESHFNNCGKINRVTILCDKFSGHPKG---YAYIEFADKS 193
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
+ A+ L ++ ++VLP +T + ++ T
Sbjct: 194 SVKVAMELDESVFRDRVIKVLPKRTNMPGISTT 226
>gi|312067511|ref|XP_003136777.1| spliceosomal protein on the X [Loa loa]
gi|307768054|gb|EFO27288.1| spliceosomal protein on the X [Loa loa]
Length = 375
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 28/155 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T+YV +D++VT+ L LF+ G VV + D +S F F+EF EE A A+ +
Sbjct: 14 TIYVGGLDEKVTDAILWELFVQAGPVVSVNMPKDRVTSSHQGFGFIEFMGEEDADYAIKI 73
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P++V + S E+ M ++ N+D +V D KL
Sbjct: 74 M-NMIKLYGKPIKVNKA--------------SAHEKNMDVGANVFVGNLDPEV---DEKL 115
Query: 295 FFES-----VCGEVQRLRLLGDYQHSTRIAFVEFA 324
F++ V +V ++ + +S AFV FA
Sbjct: 116 LFDTFSAFGVILQVPKIMRDAETGNSKGFAFVNFA 150
>gi|349577826|dbj|GAA22994.1| K7_Pab1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 577
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I+ N+ + D K ++ SV G++ ++ D ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|332030569|gb|EGI70257.1| Polyadenylate-binding protein 1 [Acromyrmex echinatior]
Length = 657
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 35/168 (20%), Positives = 70/168 (41%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + +
Sbjct: 104 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVTQDESGASKGY 163
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML + K + F+PR E ++E+ +
Sbjct: 164 GFVHFETEEAANKSIEKVNGML------LNGKKVYVG----KFIPRKERQKELGEKAKLF 213
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + +T +K FE ++ D S FV F
Sbjct: 214 TNVYVKNFGEDMTDDKLKEMFEKYGTITSHKVMIKDDGKSRGFGFVAF 261
>gi|33504434|emb|CAD44189.1| putative poly(A) binding protein [Mangifera indica]
Length = 130
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEF-TDEEGARAALSLA 238
+Y+ ++D + +++L LF G + C++ DPN + R + FV F T EE +RA L +
Sbjct: 16 LYMKNLDYSIDDDKLKQLFSQFGSITSCKVMRDPNGISRGSGFVAFTTPEEASRAILEMN 75
Query: 239 GTMLGFYPVRV 249
G M+ P+ V
Sbjct: 76 GKMVVGKPLYV 86
>gi|388507756|gb|AFK41944.1| unknown [Medicago truncatula]
Length = 411
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GT NG R +S G++R D+ T++V D+ V++ L +
Sbjct: 136 NGTIMPNGGQNFRLNWATFSSGEKR---------HDDSPDYTIFVGDLAADVSDHHLTEV 186
Query: 199 FLT------CGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 251
F T +VV R G + FV F DE E RA + G + P+R+ P
Sbjct: 187 FRTRYNSVKGAKVVIDRTTGRTKG---YGFVRFADESEQMRAMTEMQGVLCSTRPMRIGP 243
Query: 252 -------SKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
++T+ A NP +++E + + TI+ N+D VT +K F + GE+
Sbjct: 244 ASNKNLGTQTSKASYQNPQ--GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGEL 300
Query: 304 QRLRLLGDYQHSTRIAFVEFA 324
+++ R FV+FA
Sbjct: 301 VHVKI----PSGKRCGFVQFA 317
Score = 44.7 bits (104), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LA 238
T++V ++D VT+E L +F G++V +I S R FV+F D A AL L
Sbjct: 275 TIFVGNLDPNVTDEHLKQVFTQYGELVHVKIP----SGKRCGFVQFADRSSAEEALRVLN 330
Query: 239 GTMLGFYPVRV 249
GT+LG VR+
Sbjct: 331 GTLLGGQNVRL 341
>gi|358248652|ref|NP_001240173.1| uncharacterized protein LOC100814693 [Glycine max]
gi|255644669|gb|ACU22837.1| unknown [Glycine max]
Length = 411
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 60/135 (44%), Gaps = 8/135 (5%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGARAALSLA 238
YV I TE+ + + F +CG + VDC + A + F E A+ AL+L
Sbjct: 168 AYVGGIPYYSTEDDIRSYFESCGTITEVDCMTFPETGKFRGIAIITFKTEAAAKRALALD 227
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
G +G +++ P K A F P + E +R IY N+ +T+ +++ FF
Sbjct: 228 GADMGGLFLKIQPYKATRANKASDFAP---EILEGYNR-IYVGNLSWDITEEELRKFFNG 283
Query: 299 VCGEVQRLRLLGDYQ 313
E+ LR D +
Sbjct: 284 C--EITSLRFGMDKE 296
>gi|224093736|ref|XP_002309968.1| predicted protein [Populus trichocarpa]
gi|222852871|gb|EEE90418.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 52/101 (51%), Gaps = 2/101 (1%)
Query: 168 TSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFT 226
+ A ++E R+V+V ++D T E++ F +CG V I D + FA+VEF
Sbjct: 79 ANQANKEEADSRSVFVGNVDYACTPEEVQQHFQSCGTVNRVTILTDKFGQPKGFAYVEFV 138
Query: 227 DEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRS 267
+ E + AL+L + L ++V P +T + P + PRS
Sbjct: 139 EVEAVQEALALNESELHGRQLKVSPKRTNV-PGMKQYHPRS 178
>gi|340503643|gb|EGR30188.1| rbd protein, putative [Ichthyophthirius multifiliis]
Length = 379
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 75/170 (44%), Gaps = 25/170 (14%)
Query: 162 RRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
RR N R+ N + V ++ ++ E+ L+ LF G V R+ PN +
Sbjct: 96 RRTNERSKN---------IILVKNLPFKIQEDGLSELFERFGFV--TRLLISPNRSI--G 142
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREM-------C 274
V+F EE A+ A L ++ ++ P AP+ E +++
Sbjct: 143 IVQFESEEHAQNAFE----KLSYFSLKNCPLYLEWAPIGLLKTEEVEKHQKIQEEIDDEL 198
Query: 275 SRTIYCTNIDKKVTQGDIKLFFESV-CGEVQRLRLLGDYQHSTRIAFVEF 323
+R +Y N+D V + ++K FFE GE++ ++++ +S FVE+
Sbjct: 199 ARVVYIKNLDFSVQETELKEFFEKQNLGEIKAVKIIKKNNNSQGYGFVEY 248
>gi|451854943|gb|EMD68235.1| hypothetical protein COCSADRAFT_270468 [Cochliobolus sativus
ND90Pr]
Length = 749
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + E+G +A
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 109 LNYTVIKGKPCRIMWSQ 125
>gi|449673467|ref|XP_002159702.2| PREDICTED: nucleolysin TIAR-like [Hydra magnipapillata]
Length = 352
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 19/153 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC------GDPNSVLRFAFVEFTDEEGARA 233
+YV ++D++VT+ + + T + ++ GD N+ + FV+F D A
Sbjct: 13 VLYVGNLDKRVTDTMMINILRTGLPHIKEKVLSASMFPGDMNNPEGYCFVQFEDNISAMQ 72
Query: 234 ALS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDI 292
+++ L G V+V A +P +P+ S +IYC N+D + + D+
Sbjct: 73 SMNFLNGREFCGKKVKV-----NWATNSPNGMPKVIG----TSVSIYCGNLDDTIDEEDL 123
Query: 293 KLFFESVCGEVQRLRLLGD--YQHSTRIAFVEF 323
K FE V GE+ ++++ D HS IAF+ F
Sbjct: 124 KAAFE-VFGEILNIKVVRDPVTNHSKNIAFISF 155
Score = 41.2 bits (95), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 67/153 (43%), Gaps = 19/153 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 236
++Y ++D + EE L F G++++ ++ DP N AF+ FT++ A A+
Sbjct: 108 SIYCGNLDDTIDEEDLKAAFEVFGEILNIKVVRDPVTNHSKNIAFISFTNKPDAEKAIRE 167
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMC------SRTIYCTNIDKKVTQG 290
+ G ML + KT A N +D E+ + T+Y I T+
Sbjct: 168 MHGAML-----KTRAIKTNWATRNQNQKKEEQDYDEVYKGASADNTTVYAGGIPSNCTEE 222
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
I+ F+ G++ +R+ + AF++F
Sbjct: 223 QIRSHFDDY-GKIVDVRIFA----AKNYAFIKF 250
>gi|449540429|gb|EMD31421.1| hypothetical protein CERSUDRAFT_119799 [Ceriporiopsis subvermispora
B]
Length = 1030
Score = 46.2 bits (108), Expect = 0.021, Method: Composition-based stats.
Identities = 31/75 (41%), Positives = 41/75 (54%), Gaps = 5/75 (6%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FA 221
R RT ++ D R VYV+ + + T+ L LF T G V + R+ D N + FA
Sbjct: 772 RKQERTDSSAND----REVYVAGLSKFATKADLENLFKTYGAVKEVRMALDNNGRPKGFA 827
Query: 222 FVEFTDEEGARAALS 236
FVEF E+ ARAALS
Sbjct: 828 FVEFEREDDARAALS 842
Score = 38.9 bits (89), Expect = 3.5, Method: Composition-based stats.
Identities = 30/103 (29%), Positives = 49/103 (47%), Gaps = 9/103 (8%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRR-----TVYVSDIDQQVTEE 193
D A G T+T+RK + R Q ++R TV+V+D+ E
Sbjct: 576 DVDAVQQGETSTKRKAEEEILPDKSKKARIE--QGPLKLKRDRENCTVFVADLPSGAKEA 633
Query: 194 QLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS 236
LA LF CG++ + R+ P++++ A VEF + + AAL+
Sbjct: 634 DLAALFKDCGEIREIRMTQLPDALV--ATVEFQERDSVPAALT 674
>gi|357607075|gb|EHJ65345.1| hypothetical protein KGM_03830 [Danaus plexippus]
Length = 588
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 170 NAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEE 229
++++ E IRRT+ + D+ + +T +QL F G+V R C L++A +E T++E
Sbjct: 156 DSRKIEEIRRTLLLIDVGE-LTSQQLIDHFCQAGEVSYVRFCEREVDNLKYALIEMTEQE 214
Query: 230 GARAALSLAGTMLGFYPVRVLPSKTAIA 257
AL L G L ++V S AI+
Sbjct: 215 SISKALQLNGVALNGQVIKVHHSTVAIS 242
>gi|315052890|ref|XP_003175819.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
gi|311341134|gb|EFR00337.1| nucleolysin TIA-1 [Arthroderma gypseum CBS 118893]
Length = 506
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 69/160 (43%), Gaps = 22/160 (13%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-------LRFAFVEFTD 227
E +R +YV +D +VTE+ L +F T G V +I D N+ L + F+E+ D
Sbjct: 93 EPNKRALYVGGLDPRVTEDILKQIFETTGHVQSVKIIPDKNASAQFQSKGLNYGFIEYDD 152
Query: 228 EEGA-RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR-TIYCTNIDK 285
A RA +L G + +R VN + + + + S I+ ++
Sbjct: 153 PGAAERAMQTLNGRRVHQSEIR----------VNWAYQSNTASKEDTSSHFHIFVGDLSN 202
Query: 286 KVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
+V ++ L S CG V R++ D + S FV F
Sbjct: 203 EVND-EVLLQAFSACGSVSEARVMWDMKTGRSRGYGFVAF 241
>gi|146165272|ref|XP_001014712.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila]
gi|146145520|gb|EAR94568.2| hypothetical protein TTHERM_00047170 [Tetrahymena thermophila
SB210]
Length = 261
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/160 (23%), Positives = 73/160 (45%), Gaps = 14/160 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGA 231
D ++R+V+VS + + + F CG + + ++ D ++ + + F+ E A
Sbjct: 19 DPSLKRSVFVSGLPYSADTDAIKEYFQNCGTIENIKLPRYQDTGKIIGYCHLVFSTPEEA 78
Query: 232 RAALSLAGTMLG--FYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQ 289
+ A+ L ++ + + + + + N P E C+ TI+ N+ T+
Sbjct: 79 QEAIKLNKQVMNGRYLDISLAKGEKKVEYKNDVKAP------EDCT-TIFVKNLAFDCTE 131
Query: 290 GDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFAMVS 327
++ FFE CG+V +R + Y +H AF+EF M S
Sbjct: 132 DEVGEFFEK-CGKVVNVRFVYHYSQKHFKGFAFIEFKMNS 170
>gi|429962103|gb|ELA41647.1| hypothetical protein VICG_01280 [Vittaforma corneae ATCC 50505]
Length = 344
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 21/156 (13%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGA 231
DE +RTV++ DI + E+ L G+V+ I D FA+VEF A
Sbjct: 89 DEETQRTVFIKDIGYDLREDDLRQQMQRLGEVIRVTIPMTHDLRRNKGFAYVEFKRLADA 148
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGD 291
+ AL L GT L L K A+ P + R++ T++ N+ T+ +
Sbjct: 149 QKALKLDGTEL-------LGRKVAVFQAKP------RENRKIY--TLFVKNLSYTTTKSE 193
Query: 292 IKLFFESVCGEVQRLRLLGDYQHSTR---IAFVEFA 324
+K +FE G++ + L D +++ R F+E+
Sbjct: 194 LKEYFERF-GKIYNISLPVDNENTERNKGFCFIEYT 228
>gi|357480263|ref|XP_003610417.1| RNA-binding protein [Medicago truncatula]
gi|355511472|gb|AES92614.1| RNA-binding protein [Medicago truncatula]
Length = 411
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 52/201 (25%), Positives = 86/201 (42%), Gaps = 34/201 (16%)
Query: 139 DGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATL 198
+GT NG R +S G++R D+ T++V D+ V++ L +
Sbjct: 136 NGTIMPNGGQNFRLNWATFSSGEKR---------HDDSPDYTIFVGDLAADVSDHHLTEV 186
Query: 199 FLT------CGQVVDCRICGDPNSVLRFAFVEFTDE-EGARAALSLAGTMLGFYPVRVLP 251
F T +VV R G + FV F DE E RA + G + P+R+ P
Sbjct: 187 FRTRYNSVKGAKVVIDRTTGRTKG---YGFVRFADESEQMRAMTEMQGVLCSTRPMRIGP 243
Query: 252 -------SKTAIAPV-NPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEV 303
++T+ A NP +++E + + TI+ N+D VT +K F + GE+
Sbjct: 244 ASNKNLGTQTSKASYQNPQ--GGAQNENDPNNTTIFVGNLDPNVTDEHLKQVF-TQYGEL 300
Query: 304 QRLRLLGDYQHSTRIAFVEFA 324
+++ R FV+FA
Sbjct: 301 VHVKI----PSGKRCGFVQFA 317
Score = 44.7 bits (104), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 5/71 (7%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALS-LA 238
T++V ++D VT+E L +F G++V +I S R FV+F D A AL L
Sbjct: 275 TIFVGNLDPNVTDEHLKQVFTQYGELVHVKIP----SGKRCGFVQFADRSSAEEALRVLN 330
Query: 239 GTMLGFYPVRV 249
GT+LG VR+
Sbjct: 331 GTLLGGQNVRL 341
>gi|213626875|gb|AAI70309.1| Embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFV 223
S ++ E+ +R+VYV ++D T + L F +CG + + C + G P +A++
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
EF + AA+++ T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+E+++E+ R++Y N+D T D++ F S CG + R+ +L D H A++EFA
Sbjct: 84 AEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS-CGSINRITILCDKFSGHPKGYAYIEFA 142
>gi|290563184|ref|NP_001166854.1| sex-lethal isoform S [Bombyx mori]
gi|89885657|dbj|BAE86939.1| sex-lethal [Bombyx mori]
Length = 290
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 27/180 (15%)
Query: 59 AGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNF 118
+ AGG N N++ + + E +DL M + P+ + V G +
Sbjct: 8 SAAGGDTARTNLIVNYLPQNITE-------KDLYAMFVTIGPIESCRVMKDFKTGYSY-- 58
Query: 119 NPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIR 178
GFG+ N F D + NGY +R+ + D++
Sbjct: 59 --------GFGFVN-FTREEDAARAIDTF-------NGYQLRNKRLKVSYARPSGDDIKE 102
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
+YV+++ + +T++QL T+F G++V I D NS AFV + E A+ A++
Sbjct: 103 TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIA 162
>gi|67517282|ref|XP_658521.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|40746790|gb|EAA65946.1| hypothetical protein AN0917.2 [Aspergillus nidulans FGSC A4]
gi|259488796|tpe|CBF88530.1| TPA: RNA splicing factor (Pad-1), putative (AFU_orthologue;
AFUA_1G15810) [Aspergillus nidulans FGSC A4]
Length = 552
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 70/171 (40%), Gaps = 26/171 (15%)
Query: 167 RTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFA 221
R+ +DE RRT++V + ++ ++L F G Q+V R+ G V
Sbjct: 162 RSPELNEDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---G 218
Query: 222 FVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS------ 275
+VEF DE A+ L G L P+ IA + R E S
Sbjct: 219 YVEFKDESSVAPAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNSEASSGNKHSA 270
Query: 276 --RTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y NI + + D++ FE GE++ ++L D +R FV+F
Sbjct: 271 PFHRLYVGNIHFSIDENDLQSVFEPF-GELEFVQLQKDETGRSRGYGFVQF 320
>gi|413924471|gb|AFW64403.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA 231
+++V R+VYV ++D T E++ F CG V I D + FA+VEF ++E
Sbjct: 62 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAV 121
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
+ AL+L + L ++V P +T +
Sbjct: 122 QEALNLNESELHGRQIKVAPKRTNV 146
>gi|356532261|ref|XP_003534692.1| PREDICTED: splicing factor 3B subunit 4-like [Glycine max]
Length = 365
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 60/124 (48%), Gaps = 23/124 (18%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
T YV ++D Q++EE L LF+ G VV+ + D N + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQISEELLWELFVQAGPVVNVYVPKDRVTNQHQGYGFVEFRSEEDADYAIKV 85
Query: 238 AGTMLGFY--PVRVLPSKTAIAPVNPTFLPRSEDEREM-CSRTIYCTNIDKKVTQGDIKL 294
M+ Y P+RV +K S+D++ + ++ N+D V D KL
Sbjct: 86 L-NMIKLYGKPIRV--NKA------------SQDKKSLDVGANLFIGNLDPDV---DEKL 127
Query: 295 FFES 298
+++
Sbjct: 128 LYDT 131
>gi|365986410|ref|XP_003670037.1| hypothetical protein NDAI_0D04810 [Naumovozyma dairenensis CBS 421]
gi|343768806|emb|CCD24794.1| hypothetical protein NDAI_0D04810 [Naumovozyma dairenensis CBS 421]
Length = 626
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 45/80 (56%), Gaps = 4/80 (5%)
Query: 158 SQGKRRMNCRTSNAQQDEVI--RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN 215
+Q + N S +++ + +++++V + Q+ T+E L T F G+++D + P
Sbjct: 254 TQNDYKNNSNLSQGEEEMITIDKKSIFVGQLPQETTKEDLETHFWKHGKILDLNLIHKPT 313
Query: 216 SVLRFAFVEFTDEEGARAAL 235
+V FAF+++ E+ A AAL
Sbjct: 314 NV--FAFIQYESEKSAAAAL 331
>gi|225543108|ref|NP_001139415.1| sex lethal [Tribolium castaneum]
Length = 218
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEG 230
Q E + + V+ I Q TEE LA +F G+V +I D N+ F FV++ +EE
Sbjct: 21 QVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEED 80
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A A+ + M Y + L + P +M + +Y TN+ K VT+
Sbjct: 81 AAKAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVTED 127
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
D+ F + +Q+ L R +AFV F+
Sbjct: 128 DVHRLFSNYGEIIQKSVLKDKITGMPRGVAFVRFS 162
>gi|195400098|ref|XP_002058655.1| GJ14540 [Drosophila virilis]
gi|194142215|gb|EDW58623.1| GJ14540 [Drosophila virilis]
Length = 472
Score = 46.2 bits (108), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 14/158 (8%)
Query: 174 DEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
DE +T+YV ++D V+E+ L LF G V C+I +P + +AF+E+++ + A
Sbjct: 2 DESQPKTLYVGNLDGSVSEDLLIALFGKMGPVKSCKIIREPGND-PYAFIEYSNYQAAST 60
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS-RTIYCTNIDKKVTQGDI 292
AL+ RV K VN P + + ++ S I+ ++ ++ +
Sbjct: 61 ALTAMNK-------RVFLDKEIK--VNWATSPGNTPKTDISSHHHIFVGDLSPEIETETL 111
Query: 293 KLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEFAMVSE 328
+ F GE+ R++ D Q S AFV F +E
Sbjct: 112 REAFAPF-GEISNCRIVRDPQTMKSKGYAFVSFVKKAE 148
>gi|400597582|gb|EJP65312.1| polyadenylate-binding protein [Beauveria bassiana ARSEF 2860]
Length = 736
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 60/143 (41%), Gaps = 22/143 (15%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D N + +
Sbjct: 126 CRIMWSQRDPALRKTGQGNVFIKNLDVAIDNKALHDTFAAFGNILSCKVAQDENGSSKGY 185
Query: 221 AFVEFTDEEGARAALSLAGTML----GFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + +E A+ A+ ML Y +P K R EM +
Sbjct: 186 GFVHYETDEAAQQAIKHVNGMLLNEKKVYVGHHIPKKD-----------RQSKFEEMKAN 234
Query: 277 --TIYCTNIDKKVTQGDIKLFFE 297
+Y NI +VT + + FE
Sbjct: 235 FTNVYVKNISPEVTDDEFRELFE 257
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 24/77 (31%), Positives = 40/77 (51%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF G V R+C D L +A+V + + +G +A
Sbjct: 56 SLYVGELDPSVTEAMLFELFSQIGAVASIRVCRDAVTRRSLGYAYVNYNSTPDGEKALEE 115
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 116 LNYTLIKGRPCRIMWSQ 132
>gi|317030432|ref|XP_001392545.2| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus niger CBS 513.88]
Length = 478
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 231 A-RAALSLAGTMLGFYPVRV 249
A RA +L G + +RV
Sbjct: 147 AERAMQTLNGRRIHQSEIRV 166
>gi|307177851|gb|EFN66814.1| Probable splicing factor, arginine/serine-rich 7 [Camponotus
floridanus]
Length = 495
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 44/84 (52%), Gaps = 1/84 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCG-QVVDCRICGDPNSVLRFAFVEFTDEEGARA 233
E IRRT+ V+++D V+ EQL F ++ R+C + +A VE +++ A
Sbjct: 161 EEIRRTLIVANLDSLVSPEQLLDFFSNNNVEIKYLRMCSRDSDSEHYALVELSEQAAVIA 220
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIA 257
AL L G L P+++ S AIA
Sbjct: 221 ALLLNGKPLMERPIKIYHSTQAIA 244
>gi|325091867|gb|EGC45177.1| RNA-binding protein [Ajellomyces capsulatus H88]
Length = 1309
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R ++VS++D + TE+ L LF GQV RI N + F FV F +E A A+L++
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAM 1020
Query: 238 AGTMLGFYPVRVLPSKTAIA 257
+ P+ V S +A
Sbjct: 1021 NEQLFRSRPLHVHISTPTVA 1040
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 860 TVIVENLPSGVTETRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTAIAAHAATELN 919
Query: 239 GT-------MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVT 288
GT + G LP I+ P ER + R I+ +N+D K T
Sbjct: 920 GTQQEVVGDLAGSAGSMKLPLVVKISD------PTKRQERTGPTEEGREIHVSNLDWKAT 973
Query: 289 QGDIKLFFESVCGEVQRLRL 308
+ D+ F + G+V+ R+
Sbjct: 974 EDDLVELF-AAYGQVEAARI 992
>gi|310798412|gb|EFQ33305.1| RNA recognition domain-containing protein [Glomerella graminicola
M1.001]
Length = 482
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A
Sbjct: 83 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 142
Query: 234 AL 235
A+
Sbjct: 143 AM 144
>gi|303314025|ref|XP_003067021.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|240106689|gb|EER24876.1| oligouridylate binding protein ,putative [Coccidioides posadasii
C735 delta SOWgp]
gi|320039295|gb|EFW21229.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Coccidioides posadasii str. Silveira]
Length = 483
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +D +VTE+ L +F T G V +I D NS L + FVE+ D A R
Sbjct: 88 EPNKRALYVGGLDPRVTEDILRQIFETTGHVQSVKIIPDKNSKGLNYGFVEYDDPGAAER 147
Query: 233 AALSLAGTMLGFYPVRV 249
A +L G + +RV
Sbjct: 148 AMQTLNGRRVHQSEIRV 164
>gi|225713126|gb|ACO12409.1| Sex-lethal homolog [Lepeophtheirus salmonis]
gi|290561258|gb|ADD38031.1| Sex-lethal homolog [Lepeophtheirus salmonis]
Length = 255
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 78/163 (47%), Gaps = 20/163 (12%)
Query: 171 AQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRF--AFVEFTDE 228
A+ D+ R + ++ + Q +T+ +L ++F+TCG +V RI D S F FV + +
Sbjct: 22 ARGDDEDRTNLIINYLPQSMTDNELFSMFVTCGPLVQARIIRDRKSGYSFGYGFVHYENP 81
Query: 229 EGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKV 287
+ A+ A+ +L+G + ++V ++ P +E ++ +Y N+ V
Sbjct: 82 KDAKRAIETLSGLAIQNKTIKVSYAR-----------PNTELIKD---SNLYIANLGCSV 127
Query: 288 TQGDIKLFFESVCGEVQRLRLLGD--YQHSTRIAFVEFAMVSE 328
T+ I F S G++ L LL D +AFV ++ SE
Sbjct: 128 TEEAIHSMF-STYGKIVTLNLLKDPITGKPKGVAFVRYSKQSE 169
>gi|172092|gb|AAA34838.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
Length = 577
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I+ N+ + D K ++ SV G++ ++ D ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|6321013|ref|NP_011092.1| Pab1p [Saccharomyces cerevisiae S288c]
gi|417441|sp|P04147.4|PABP_YEAST RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=ARS consensus-binding protein ACBP-67;
AltName: Full=Polyadenylate tail-binding protein
gi|171967|gb|AAA34787.1| poly (A)-binding protein [Saccharomyces cerevisiae]
gi|218386|dbj|BAA00017.1| polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|603406|gb|AAB64692.1| Pab1p: polyadenylate-binding protein [Saccharomyces cerevisiae]
gi|51013159|gb|AAT92873.1| YER165W [Saccharomyces cerevisiae]
gi|151944882|gb|EDN63141.1| poly(A) binding protein [Saccharomyces cerevisiae YJM789]
gi|207345803|gb|EDZ72507.1| YER165Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146093|emb|CAY79353.1| Pab1p [Saccharomyces cerevisiae EC1118]
gi|285811799|tpg|DAA07827.1| TPA: Pab1p [Saccharomyces cerevisiae S288c]
gi|365765943|gb|EHN07446.1| Pab1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299869|gb|EIW10961.1| Pab1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 577
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I+ N+ + D K ++ SV G++ ++ D ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|410907089|ref|XP_003967024.1| PREDICTED: la-related protein 7-like [Takifugu rubripes]
Length = 519
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 42/98 (42%), Gaps = 17/98 (17%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI-----CGDPNSVLRFAFVEFTDEEGARA 233
RTVYV + + VT + +F CG VV + GDP FAFVEF EE AR
Sbjct: 118 RTVYVELLPKDVTHGWIERVFAKCGTVVYVSVPRYKSSGDPKG---FAFVEFEKEEEARQ 174
Query: 234 ALSLAGTMLGFYPVRVLPSKTAIAPV----NPTFLPRS 267
A+ + P P K I P P LP S
Sbjct: 175 AIEVLNN-----PPEDAPRKAGIFPKTRCGKPVHLPAS 207
>gi|270009354|gb|EFA05802.1| hypothetical protein TcasGA2_TC030646 [Tribolium castaneum]
Length = 212
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 68/155 (43%), Gaps = 16/155 (10%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEG 230
Q E + + V+ I Q TEE LA +F G+V +I D N+ F FV++ +EE
Sbjct: 21 QVECDKSKLIVNYIPQFATEEDLALIFTPIGRVESIKIMRDYNTGYSFGFGFVKYFNEED 80
Query: 231 ARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
A A+ + M Y + L + P +M + +Y TN+ K VT+
Sbjct: 81 AAKAIQVINGM--NYKNKRLKVSYSRPP-----------GADMKASNLYITNLPKDVTED 127
Query: 291 DIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
D+ F + +Q+ L R +AFV F+
Sbjct: 128 DVHRLFSNYGEIIQKSVLKDKITGMPRGVAFVRFS 162
>gi|147899481|ref|NP_001084418.1| embryonic polyadenylate-binding protein 2-B [Xenopus laevis]
gi|82238228|sp|Q6TY21.1|EPA2B_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-B;
Short=Embryonic poly(A)-binding protein 2-B;
Short=XePABP2-B; Short=ePABP-2B; Short=ePABP2-B;
AltName: Full=Embryonic poly(A)-binding protein type
II-B
gi|38641399|gb|AAR26263.1| embryonic poly(A) binding protein 2 [Xenopus laevis]
Length = 218
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 52/99 (52%), Gaps = 8/99 (8%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLRFAFV 223
S ++ E+ +R+VYV ++D T + L F +CG + + C + G P +A++
Sbjct: 83 SAEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSSCGSINRITILCDKFSGHPKG---YAYI 139
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
EF + AA+++ T+ ++VLP +T + ++ T
Sbjct: 140 EFAERNSVDAAVAMDETVFRGRTIKVLPKRTNMPGISST 178
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+E+++E+ R++Y N+D T D++ F S CG + R+ +L D H A++EFA
Sbjct: 84 AEEKKEIDKRSVYVGNVDYGSTAQDLEAHFSS-CGSINRITILCDKFSGHPKGYAYIEFA 142
>gi|410956870|ref|XP_003985059.1| PREDICTED: LOW QUALITY PROTEIN: polyadenylate-binding protein
4-like [Felis catus]
Length = 486
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 22/150 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAALSL 237
++YV D+ VTE+ L F T G V+ RIC D L +A+V F A+ AL
Sbjct: 110 SLYVGDLHADVTEDLLFKKFSTVGPVLSIRICRDLVTRRSLGYAYVNFLKLADAQRALDT 169
Query: 238 AG--TMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLF 295
T+ G P+R++ S+ R R+ ++ N+D+ + D K
Sbjct: 170 MNFDTIKG-KPIRLMWSQ------------RDAYLRKSGIGNVFIKNLDRSI---DNKTL 213
Query: 296 FE--SVCGEVQRLRLLGDYQHSTRIAFVEF 323
+E S G++ +++ D Q S AFV F
Sbjct: 214 YEHFSAFGKILSSKVMSDDQGSRGYAFVHF 243
>gi|452984370|gb|EME84127.1| hypothetical protein MYCFIDRAFT_202901 [Pseudocercospora fijiensis
CIRAD86]
Length = 715
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 73/168 (43%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 126 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAVDEHGNSKGY 185
Query: 221 AFVEFTDEEGARAAL-SLAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + + A A+ S+ G +L V V +P K ++ +E +
Sbjct: 186 GFVHYETSDAANQAIKSVNGMLLNEKKVFVGHHIPKKDRMSKF---------EEMKANFT 236
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
IY NID + T + + FE G++ L D Q R FV F
Sbjct: 237 NIYVKNIDAETTDDEFRELFEKY-GQITSASLAHDDQGKVRGFGFVNF 283
Score = 45.1 bits (105), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 56 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSAADGERALEE 115
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 116 LNYTLIKGKPCRIMWSQ 132
>gi|380478106|emb|CCF43782.1| RNA recognition domain-containing protein [Colletotrichum
higginsianum]
Length = 482
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGARA 233
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A
Sbjct: 83 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 142
Query: 234 AL 235
A+
Sbjct: 143 AM 144
>gi|358371808|dbj|GAA88414.1| nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Aspergillus kawachii IFO 4308]
Length = 478
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 5/80 (6%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV----LRFAFVEFTDEEG 230
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNKFNSKGYNYGFVEFDDPGA 146
Query: 231 A-RAALSLAGTMLGFYPVRV 249
A RA +L G + +RV
Sbjct: 147 AERAMQTLNGRRIHQSEIRV 166
>gi|307196969|gb|EFN78344.1| Polyadenylate-binding protein 2 [Harpegnathos saltator]
Length = 228
Score = 46.2 bits (108), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG V I G P FA++EF + +
Sbjct: 96 EVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYIEFAERD 152
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ A+++ +M ++V+P +T
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|195637520|gb|ACG38228.1| polyadenylate-binding protein 2 [Zea mays]
Length = 194
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA 231
+++V R+VYV ++D T E++ F CG V I D + FA+VEF ++E
Sbjct: 62 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAV 121
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
+ AL+L + L ++V P +T +
Sbjct: 122 QEALNLNESELHGRQIKVAPKRTNV 146
>gi|77379390|gb|ABA71352.1| sex-lethal isoform 2 [Bombyx mori]
Length = 313
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 27/180 (15%)
Query: 59 AGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNF 118
+ AGG N N++ + + E +DL M + P+ + V G +
Sbjct: 54 SAAGGDTARTNLIVNYLPQNITE-------KDLYAMFVTIGPIESCRVMKDFKTGYSY-- 104
Query: 119 NPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIR 178
GFG+ N F D + NGY +R+ + D++
Sbjct: 105 --------GFGFVN-FTREEDAARAIDTF-------NGYQLRNKRLKVSYARPSGDDIKE 148
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
+YV+++ + +T++QL T+F G++V I D NS AFV + E A+ A++
Sbjct: 149 TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIA 208
>gi|115448789|ref|NP_001048174.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|46805689|dbj|BAD17090.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|113537705|dbj|BAF10088.1| Os02g0757900 [Oryza sativa Japonica Group]
gi|215692407|dbj|BAG87827.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623708|gb|EEE57840.1| hypothetical protein OsJ_08453 [Oryza sativa Japonica Group]
Length = 212
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA 231
+++V R+VYV ++D T E++ F CG V I D + FA+VEF ++E
Sbjct: 80 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAV 139
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
+ AL+L + L ++V P +T +
Sbjct: 140 QEALNLNESELHGRQIKVAPKRTNV 164
>gi|429243189|ref|NP_594422.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe
972h-]
gi|380865416|sp|O13845.2|RSD1_SCHPO RecName: Full=RNA-binding protein rsd1
gi|347834186|emb|CAB10118.2| RNA-binding protein Rsd1 (predicted) [Schizosaccharomyces pombe]
Length = 603
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEG 230
++E RRTV+VS + ++T +L F G V D +I D S A+VEF E+
Sbjct: 234 EEERDRRTVFVSQLANRLTSRELYDFFEQAGPVRDAQIVRDKISGRSKGVAYVEFCHEDS 293
Query: 231 ARAALSLAGTMLGFYPVRV 249
+AA++L+G L PV V
Sbjct: 294 VQAAIALSGKRLLGLPVIV 312
>gi|342184931|emb|CCC94413.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 374
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 37/72 (51%)
Query: 182 YVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAFVEFTDEEGARAALSLAGTM 241
Y+ +ID+ VT E L +F CG ++DC + G R+ F++F E+ A+ G
Sbjct: 12 YIGNIDRSVTLEVLRQVFSQCGVIIDCSLNGRDEDPYRYGFIDFATEDDRARAMKYNGFT 71
Query: 242 LGFYPVRVLPSK 253
L ++V SK
Sbjct: 72 LAGRKIKVGISK 83
>gi|195116809|ref|XP_002002944.1| GI10246 [Drosophila mojavensis]
gi|193913519|gb|EDW12386.1| GI10246 [Drosophila mojavensis]
Length = 617
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 62/140 (44%), Gaps = 10/140 (7%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI--CGDPNSVLRFAFVEFTDEEGARAALS 236
RTV+ + Q+V L F + G+V D R+ C A++EF D E AL
Sbjct: 260 RTVFCIQLSQRVRARDLEEFFSSVGKVRDVRLITCNKTKRFKGIAYIEFEDPESVALALG 319
Query: 237 LAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L+G L P+ V + K + P F P++ +Y ++ +T+ ++
Sbjct: 320 LSGQRLLGVPIMVQHTQAEKNRLQSAPPPFQPKA----HTGPMRLYVGSLHFNITEDMLR 375
Query: 294 LFFESVCGEVQRLRLLGDYQ 313
FE G++ ++L+ D +
Sbjct: 376 GIFEPF-GKIDAIQLIMDTE 394
>gi|342183460|emb|CCC92940.1| putative polyadenylate-binding protein 1 [Trypanosoma congolense
IL3000]
Length = 552
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL-SLA 238
+YV + D + TE+ L LF G + CR+ D N V R F FV F + + A AAL ++
Sbjct: 305 LYVRNFDPEFTEKDLNELFKEYGVIRSCRVMTDANGVSRGFGFVSFENADQANAALREMS 364
Query: 239 GTMLGFYPVRV 249
G ML P+ V
Sbjct: 365 GRMLNGKPLVV 375
Score = 38.1 bits (87), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 31/148 (20%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+D ++E QL +F G +++ R+C D L + +V + + A A+
Sbjct: 22 SLYVGDLDPAISEPQLVEIFRPYGTILNVRVCRDIITQRSLGYGYVNYDNANSATKAMEE 81
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ +G +R++ + R R + ++ N+ +V ++ L F
Sbjct: 82 MNFKRVGEKCIRIM------------WQQRDPALRYSGNGNVFVKNLKGEVDSRELSLIF 129
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+ GE+ +++ D ++R FV F
Sbjct: 130 KKF-GEILSCKVMDDESGNSRGYGFVHF 156
>gi|270007747|gb|EFA04195.1| hypothetical protein TcasGA2_TC014444 [Tribolium castaneum]
Length = 522
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 71/168 (42%), Gaps = 12/168 (7%)
Query: 163 RMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCR--ICGDPNSVLRF 220
R N +E RTV+V + Q++ L F + G+V D R +C
Sbjct: 148 RSNSPVEELSPEERDARTVFVMQLSQRIRARDLEEFFSSVGKVRDVRLIVCNKTRRFKGI 207
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPS---KTAIAPVNPTFLPRSEDEREMCSRT 277
A++EF D E AL L+G L P+ V + K + P +P++
Sbjct: 208 AYIEFKDPESVTLALGLSGQKLLGVPIIVQHTQAEKNRMGNSMPNLMPKN----MTGPMR 263
Query: 278 IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQ--HSTRIAFVEF 323
+Y ++ +T+ ++ FE G++ ++L+ D + S F+ F
Sbjct: 264 LYVGSLHFNITEDMLRSIFEPF-GKIDNIQLIMDPETGRSKGYGFIAF 310
>gi|410076202|ref|XP_003955683.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
gi|372462266|emb|CCF56548.1| hypothetical protein KAFR_0B02500 [Kazachstania africana CBS 2517]
Length = 582
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 6/82 (7%)
Query: 169 SNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFT 226
S QQ + ++YV D+D V+E L +F G V R+C D + L +A+V F
Sbjct: 30 SEGQQSDSNSTSLYVGDLDPSVSEALLYDIFSPIGSVTSIRVCRDAITKTSLGYAYVNFA 89
Query: 227 DEEGARAALSLAGTMLGFYPVR 248
D E + A+ L + P++
Sbjct: 90 DHEAGKVAIE----RLNYTPIK 107
>gi|307171015|gb|EFN63078.1| Polyadenylate-binding protein 2 [Camponotus floridanus]
Length = 228
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG V I G P FA++EF + +
Sbjct: 96 EVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYIEFAERD 152
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ A+++ +M ++V+P +T
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|255550690|ref|XP_002516394.1| spliceosome associated protein, putative [Ricinus communis]
gi|223544492|gb|EEF46011.1| spliceosome associated protein, putative [Ricinus communis]
Length = 376
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 40/73 (54%), Gaps = 3/73 (4%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
T YV ++D QV+EE L LF+ G VV+ + D + L + FVEF EE A A+ +
Sbjct: 26 TAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDRVTNLHQGYGFVEFRSEEDADYAIKI 85
Query: 238 AGTMLGF-YPVRV 249
+ F P+RV
Sbjct: 86 MNMIKLFGKPIRV 98
>gi|226529568|ref|NP_001148500.1| polyadenylate-binding protein 2 [Zea mays]
gi|195619834|gb|ACG31747.1| polyadenylate-binding protein 2 [Zea mays]
gi|413924473|gb|AFW64405.1| polyadenylate-binding protein 2 [Zea mays]
Length = 212
Score = 46.2 bits (108), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA 231
+++V R+VYV ++D T E++ F CG V I D + FA+VEF ++E
Sbjct: 80 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAV 139
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
+ AL+L + L ++V P +T +
Sbjct: 140 QEALNLNESELHGRQIKVAPKRTNV 164
>gi|307095208|gb|ADN29910.1| poly A binding protein cytoplasmic 1 isoform 1-like protein
[Triatoma matogrossensis]
Length = 341
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/168 (22%), Positives = 68/168 (40%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
R +Q+D +R++ V++ ++D+ + + + F G ++ C++ D + + +
Sbjct: 84 IRIMWSQRDPSLRKSGVGNVFIKNLDKNIDNKAMYDTFSAFGNILSCKVAQDESGSSKGY 143
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F EE A ++ ML L K F+PR E E+E+ +
Sbjct: 144 GFVHFETEEAATKSIDKVNGML-------LNGKKVFVG---KFIPRKEREKELGEKAKLF 193
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTRIAFVEF 323
+Y N + T +K FE ++ Q S FV F
Sbjct: 194 TNVYVKNFGEDFTDDMLKEMFEKYGPITSHTVVVNKDQKSRGFGFVAF 241
>gi|189190886|ref|XP_001931782.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973388|gb|EDU40887.1| polyadenylate-binding protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 704
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + E+G +A
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 109 LNYTVIKGKPCRIMWSQ 125
>gi|121700823|ref|XP_001268676.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
gi|119396819|gb|EAW07250.1| RNA splicing factor (Pad-1), putative [Aspergillus clavatus NRRL 1]
Length = 566
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 69/165 (41%), Gaps = 26/165 (15%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCG-----QVVDCRICGDPNSVLRFAFVEFTD 227
+DE RRT++V + ++ ++L F G Q+V R+ G V +VEF
Sbjct: 170 EDERDRRTIFVQQLAARLRTKELIAFFEKVGPVKEAQIVKDRVSGRSKGV---GYVEFKS 226
Query: 228 EEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS--------RTIY 279
EE A+ L G L P+ IA + R E S +Y
Sbjct: 227 EESVAPAIQLTGQKLLGIPI--------IAQLTEAEKNRQARNPEASSGHNHAAPFHRLY 278
Query: 280 CTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
NI +T+ D++ FE GE++ ++L D +R FV+F
Sbjct: 279 VGNIHFSITENDLQNVFEPF-GELEFVQLQKDETGRSRGYGFVQF 322
>gi|449547299|gb|EMD38267.1| hypothetical protein CERSUDRAFT_113433 [Ceriporiopsis subvermispora
B]
Length = 679
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 33/139 (23%), Positives = 61/139 (43%), Gaps = 14/139 (10%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T +++ ++D+ + + L F G V+ C++ D + + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNIFIKNLDEGIDNKALHDTFAAFGNVLSCKVATDEHGRSKGY 178
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM ++ +
Sbjct: 179 GFVHYETAEAADTAIKAVNGML-------LNDKKVYVGPHISRKERQSKIEEMKAQFTNV 231
Query: 279 YCTNIDKKVTQGDIKLFFE 297
Y NID +VT + + FE
Sbjct: 232 YVKNIDAEVTDEEFRQLFE 250
>gi|429863469|gb|ELA37920.1| nuclear and cytoplasmic polyadenylated rna-binding protein pub1
[Colletotrichum gloeosporioides Nara gc5]
Length = 479
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 82 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 141
Query: 233 AALSLAGTMLGFYPVRV 249
A +L G + +RV
Sbjct: 142 AMQTLNGRRVHQSEIRV 158
>gi|226470148|emb|CAX70355.1| Polyadenylate-binding protein 2 [Schistosoma japonicum]
Length = 214
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 52/106 (49%), Gaps = 8/106 (7%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RICGDPNSVLR 219
N S+ + EV R+VYV ++D T ++L F CG + + C + G P
Sbjct: 72 NSNLSDEDKTEVDLRSVYVGNVDYGSTADELEAHFRGCGPINRVTILCNKFTGHPKG--- 128
Query: 220 FAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLP 265
FA++EF + AA++L + ++VLP +T + ++ T P
Sbjct: 129 FAYIEFDTRDAFEAAIALDDSSFRSRQLKVLPKRTNVPGMSMTNRP 174
>gi|256271306|gb|EEU06376.1| Pab1p [Saccharomyces cerevisiae JAY291]
Length = 577
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I+ N+ + D K ++ SV G++ ++ D ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|357124786|ref|XP_003564078.1| PREDICTED: polyadenylate-binding protein 2-like [Brachypodium
distachyon]
Length = 209
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 2/93 (2%)
Query: 165 NCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFV 223
N TS A++ E+ R+V+V ++D T E++ F +CG V I D + FA+V
Sbjct: 69 NATTSEAKE-EMDSRSVFVGNVDYACTPEEVQQHFNSCGTVNRVTILTDKFGQPKGFAYV 127
Query: 224 EFTDEEGARAALSLAGTMLGFYPVRVLPSKTAI 256
EF + E + A+ L+ + L ++V P +T +
Sbjct: 128 EFVEAEAIQEAVKLSESELHGRQIKVAPKRTNV 160
>gi|332026434|gb|EGI66562.1| Polyadenylate-binding protein 2 [Acromyrmex echinatior]
Length = 228
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG V I G P FA++EF + +
Sbjct: 96 EVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYIEFAERD 152
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ A+++ +M ++V+P +T
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|330938161|ref|XP_003305701.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
gi|311317207|gb|EFQ86241.1| hypothetical protein PTT_18612 [Pyrenophora teres f. teres 0-1]
Length = 749
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 43/77 (55%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEF-TDEEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + E+G +A
Sbjct: 49 SLYVGELDPSVTEAMLFELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNSSEDGEKALEE 108
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 109 LNYTVIKGKPCRIMWSQ 125
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/168 (23%), Positives = 72/168 (42%), Gaps = 20/168 (11%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 119 CRIMWSQRDPALRKTGQGNVFIKNLDHAIDNKALHDTFAAFGNILSCKVAQDELGNSKGY 178
Query: 221 AFVEFTDEEGARAALS-LAGTMLGFYPVRV---LPSKTAIAPVNPTFLPRSEDEREMCSR 276
FV + E A A+ + G +L V V +P K ++ +E +
Sbjct: 179 GFVHYETAEAANNAIKHVNGMLLNEKKVFVGHHIPKKERMSKF---------EEMKANFT 229
Query: 277 TIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
IY NID V+ D + FE G++ + D Q +R FV +
Sbjct: 230 NIYVKNIDLDVSDDDFRDLFEK-HGDITSASIARDDQGKSRGFGFVNY 276
>gi|225554943|gb|EEH03237.1| RNA-binding protein Prp24 [Ajellomyces capsulatus G186AR]
Length = 1309
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%), Gaps = 1/80 (1%)
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALSL 237
R ++VS++D + TE+ L LF GQV RI N + F FV F +E A A+L++
Sbjct: 961 REIHVSNLDWKATEDDLVELFAAYGQVEAARIPRKANGASKGFGFVVFQTKESAEASLAM 1020
Query: 238 AGTMLGFYPVRVLPSKTAIA 257
+ P+ V S +A
Sbjct: 1021 NEQLFRSRPLHVHISTPTVA 1040
Score = 42.7 bits (99), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 18/140 (12%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICG-DPNSVLRFAFVEFTDEEGARAALSLA 238
TV V ++ VTE ++ F G+VVD R N+ RF +V+F A AA L
Sbjct: 860 TVIVENLPSGVTETRVRQFFRDYGEVVDIRFPSLKYNTHRRFCYVQFQTAIAAHAATELN 919
Query: 239 GT-------MLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCS---RTIYCTNIDKKVT 288
GT + G LP I+ P ER + R I+ +N+D K T
Sbjct: 920 GTQQEVVGDLAGSADSMKLPLVVKISD------PTKRQERTGPTEEGREIHVSNLDWKAT 973
Query: 289 QGDIKLFFESVCGEVQRLRL 308
+ D+ F + G+V+ R+
Sbjct: 974 EDDLVELF-AAYGQVEAARI 992
>gi|426374260|ref|XP_004053996.1| PREDICTED: probable RNA-binding protein 19 [Gorilla gorilla
gorilla]
Length = 960
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 63/135 (46%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE+L +F G V C I N + F FVE+ E A+ A
Sbjct: 731 TLFIKNLNFDTTEEKLKEVFSKVGTVKSCSISKKKNKAGALLSMGFGFVEYRKPEQAQKA 790
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G ++ + + V S+ A P T + + R+ + I NI + +I+
Sbjct: 791 LKQLQGHVVDGHKLEVRISERATKPAM-TSARKKQVPRKQTTSKILVRNIPFQAHSREIR 849
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 850 ELF-STFGELKTVRL 863
>gi|46805690|dbj|BAD17091.1| putative poly(A) binding protein [Oryza sativa Japonica Group]
gi|125541200|gb|EAY87595.1| hypothetical protein OsI_09006 [Oryza sativa Indica Group]
gi|215678683|dbj|BAG92338.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA 231
+++V R+VYV ++D T E++ F CG V I D + FA+VEF ++E
Sbjct: 84 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAV 143
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
+ AL+L + L ++V P +T +
Sbjct: 144 QEALNLNESELHGRQIKVAPKRTNV 168
>gi|348688369|gb|EGZ28183.1| hypothetical protein PHYSODRAFT_470319 [Phytophthora sojae]
Length = 120
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 36/61 (59%), Gaps = 4/61 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR---FAFVEFTDEEGARAA 234
+R +YV +D+QVTE+ L T F+ G + +I D S R F FVEF DE ARAA
Sbjct: 7 KRALYVGGLDKQVTEQGLYTAFVPFGPIKGVQIPMD-YSTQRSKGFGFVEFEDEADARAA 65
Query: 235 L 235
+
Sbjct: 66 I 66
>gi|148227694|ref|NP_001082505.1| embryonic polyadenylate-binding protein 2-A [Xenopus laevis]
gi|82241899|sp|Q804A5.1|EPA2A_XENLA RecName: Full=Embryonic polyadenylate-binding protein 2-A;
Short=Embryonic poly(A)-binding protein 2-A;
Short=XePABP2-A; Short=ePABP-2A; Short=ePABP2-A;
AltName: Full=Embryonic poly(A)-binding protein type
II-A; AltName: Full=PABPN2; AltName: Full=p32
gi|28273596|gb|AAO33927.1| putative polyA-binding protein PABPN2/ePABP2 [Xenopus laevis]
Length = 218
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/111 (26%), Positives = 57/111 (51%), Gaps = 11/111 (9%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQV----VDC-RIC 211
Y++G R S ++ E+ +R+VYV ++D T + L F +CG + + C +
Sbjct: 74 YTEGPPRP---LSAEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSSCGSINRITILCDKFS 130
Query: 212 GDPNSVLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPT 262
G P +A++EF + AA+++ T+ ++VLP +T + ++ T
Sbjct: 131 GHPKG---YAYIEFAERNSVDAAVTMDETVFRGRTIKVLPKRTNMPGISST 178
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 267 SEDEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDY--QHSTRIAFVEFA 324
+E+++E+ R++Y N+D T D++ F S CG + R+ +L D H A++EFA
Sbjct: 84 AEEKKEIDKRSVYVGNVDYGGTAQDLEAHFSS-CGSINRITILCDKFSGHPKGYAYIEFA 142
>gi|145347251|ref|XP_001418087.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578315|gb|ABO96380.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 319
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 55/122 (45%), Gaps = 20/122 (16%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALSL 237
TVYV ++D QVTEE L LFL G V + + D + + FVEF +EE A + +
Sbjct: 30 TVYVGNLDPQVTEEVLWELFLQAGPVTNVYVPKDRVTSTHQGYGFVEFRNEEDAEYGIKI 89
Query: 238 AGTMLGF-YPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ F P++V S D R+ ++ N+D + D KL +
Sbjct: 90 LNMVKLFGKPIKVNKSVG--------------DRRDEVGANLFIGNLDPDI---DEKLLY 132
Query: 297 ES 298
++
Sbjct: 133 DT 134
>gi|119496945|ref|XP_001265244.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
gi|158512647|sp|A1D4K4.1|PABP_NEOFI RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|119413406|gb|EAW23347.1| polyadenylate-binding protein [Neosartorya fischeri NRRL 181]
Length = 751
Score = 46.2 bits (108), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 123 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 182
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 183 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 235
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
Y NID++VT + + FE GE+ L D + +R FV F+
Sbjct: 236 YIKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNFS 281
Score = 45.4 bits (106), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 113 LNYTLIKGKPCRIMWSQ 129
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
VY+ +IDQ+VT+E+ +F G++ + D R F FV F+ + A+AA+
Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAV 290
>gi|413924475|gb|AFW64407.1| hypothetical protein ZEAMMB73_935050 [Zea mays]
Length = 171
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 46/85 (54%), Gaps = 1/85 (1%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGA 231
+++V R+VYV ++D T E++ F CG V I D + FA+VEF ++E
Sbjct: 39 KEQVDARSVYVGNVDYACTPEEVQQHFQACGTVNRVTILTDKFGQPKGFAYVEFLEQEAV 98
Query: 232 RAALSLAGTMLGFYPVRVLPSKTAI 256
+ AL+L + L ++V P +T +
Sbjct: 99 QEALNLNESELHGRQIKVAPKRTNV 123
>gi|401625965|gb|EJS43937.1| pab1p [Saccharomyces arboricola H-6]
Length = 577
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPTVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAID----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I+ N+ + D K ++ SV G++ ++ D ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|383855268|ref|XP_003703137.1| PREDICTED: polyadenylate-binding protein 2-like [Megachile
rotundata]
Length = 228
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG V I G P FA++EF + +
Sbjct: 96 EVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYIEFAERD 152
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ A+++ +M ++V+P +T
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|255718749|ref|XP_002555655.1| KLTH0G14344p [Lachancea thermotolerans]
gi|238937039|emb|CAR25218.1| KLTH0G14344p [Lachancea thermotolerans CBS 6340]
Length = 587
Score = 46.2 bits (108), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 62/146 (42%), Gaps = 15/146 (10%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAALSLA 238
+YV ++D VTE L LF G V R+C D + L +A+V F D R A+
Sbjct: 42 LYVGELDPSVTEALLYDLFSPIGSVSSIRVCRDAITKTSLGYAYVNFHDHNAGRTAIE-- 99
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
L + P++ P + + +P+ R+ S ++ N+ + + F S
Sbjct: 100 --KLNYTPIKGRPCRIMWSQRDPSL-------RKKGSGNVFIKNLHPAIDNKALHDTF-S 149
Query: 299 VCGEVQRLRLLGDYQHSTR-IAFVEF 323
V G + ++ D +R FV F
Sbjct: 150 VFGNILSCKIATDETGKSRKFGFVHF 175
>gi|255562178|ref|XP_002522097.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
gi|223538696|gb|EEF40297.1| Heterogeneous nuclear ribonucleoprotein A1, putative [Ricinus
communis]
Length = 478
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 55/138 (39%), Gaps = 9/138 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAAL 235
R ++V + T E L F G++ DC+ D S + F+ F GAR AL
Sbjct: 134 HRKIFVHGLGWDSTAETLTNAFKQYGEIEDCKAVCDKVSGKSKGYGFILFKKRSGARKAL 193
Query: 236 -----SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQG 290
+ M + P T+ AP N T P + E R IY +N+ +
Sbjct: 194 EEPQKKIGNRMTACQLASMGPVPTSTAPAN-TPAPGQQQVSEYTQRKIYISNVGADLDPQ 252
Query: 291 DIKLFFESVCGEVQRLRL 308
+ FF S GE++ L
Sbjct: 253 QLTSFF-SKFGEIEEGPL 269
>gi|19173032|ref|NP_597583.1| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi
GB-M1]
gi|449329681|gb|AGE95951.1| nucleolar protein of the gar family [Encephalitozoon cuniculi]
Length = 293
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 22/150 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
TV++ I +TE L + G+V V + D F +VEF EE + AL L
Sbjct: 88 TVFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDHKRNKGFGYVEFCKEEDVKKALKL 147
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
GT+ L + + + PR+ ER TIY +NI + + D+K +FE
Sbjct: 148 DGTVF-------LGREVVVNMAH----PRANKER----HTIYVSNIPYECDKRDLKKYFE 192
Query: 298 SVCGEVQRLRLLGDYQHSTRI---AFVEFA 324
+ GEV + L D + + R+ FV+F
Sbjct: 193 GM-GEVVGMSLPYD-RDNNRLKGYGFVDFG 220
>gi|393245425|gb|EJD52935.1| polyadenylate binding protein [Auricularia delicata TFB-10046 SS5]
Length = 665
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 77/179 (43%), Gaps = 25/179 (13%)
Query: 157 YSQGKRRMNCRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICG 212
YS K R CR +Q+D +R+T +++ ++D+Q+ + L F G V+ C++
Sbjct: 110 YSLIKNRA-CRIMWSQRDPALRKTGQGNIFIKNLDEQIDNKALHDTFAAFGNVLSCKVAT 168
Query: 213 DPNSVLR-FAFVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSE-- 268
D + + + FV + E A A+ S+ G +L V V +PR E
Sbjct: 169 DEHGNSKGYGFVHYETAEAAENAIKSVNGMLLNDKKVFV-----------GHHIPRKERQ 217
Query: 269 ---DEREMCSRTIYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
DE + IY N+D ++ Q + F G + L D + +R FV F
Sbjct: 218 SKIDEMKAQYTNIYVKNLDPELGQEGFEELFGKF-GNITSAALSKDEEGKSRGFGFVNF 275
Score = 38.1 bits (87), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 61/136 (44%), Gaps = 14/136 (10%)
Query: 127 GFGYTNNFIMHTDGTANTNG-HTTTRRKRNGY-----SQGKRRMNCRTS--NAQQDEVIR 178
GFG+ N F H A H T R Y + +R R S NA+Q+++ +
Sbjct: 269 GFGFVN-FESHEQAAAAVETLHDTEINGRKLYVARAQKKSEREDELRKSYENAKQEKLSK 327
Query: 179 R---TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD-PNSVLRFAFVEFTD-EEGARA 233
+Y+ +++ + +E+L F G + C++ D N+ F FV F+ +E +A
Sbjct: 328 YQGVNLYIKNLEDDIDDEKLRAEFEPFGTITSCKVMRDEKNTSKGFGFVCFSSPDEATKA 387
Query: 234 ALSLAGTMLGFYPVRV 249
+ M+G P+ V
Sbjct: 388 VSEMNNKMIGSKPLYV 403
>gi|323355343|gb|EGA87168.1| Pab1p [Saccharomyces cerevisiae VL3]
Length = 563
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 73/170 (42%), Gaps = 19/170 (11%)
Query: 159 QGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NS 216
Q ++ S +Q E ++YV D++ V+E L +F G V R+C D +
Sbjct: 18 QDDQKQAATGSESQSVENSSASLYVGDLEPSVSEAHLYDIFSPIGSVSSIRVCRDAITKT 77
Query: 217 VLRFAFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR 276
L +A+V F D E R A+ L + P++ + + +P+ R+ S
Sbjct: 78 SLGYAYVNFNDHEAGRKAIE----QLNYTPIKGRLCRIMWSQRDPSL-------RKKGSG 126
Query: 277 TIYCTNIDKKVTQGDIKLFFE--SVCGEVQRLRLLGDYQHSTR-IAFVEF 323
I+ N+ + D K ++ SV G++ ++ D ++ FV F
Sbjct: 127 NIFIKNLHPDI---DNKALYDTFSVFGDILSSKIATDENGKSKGFGFVHF 173
>gi|126324467|ref|XP_001378428.1| PREDICTED: probable RNA-binding protein 19 [Monodelphis domestica]
Length = 969
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 64/135 (47%), Gaps = 8/135 (5%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-----LRFAFVEFTDEEGARAA 234
T+++ +++ TEE L F G+V +C I N + F FVE+ E A+ A
Sbjct: 714 TLFIKNLNFSTTEETLKEAFSKVGKVKNCSISKKKNKAGVSLSMGFGFVEYQKPEQAQKA 773
Query: 235 LS-LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIK 293
L L G M+ + + V S+ A+ P T + + R+ + I NI + +I+
Sbjct: 774 LKQLQGCMVDDHKLEVRISERAVKPAL-TSARQKQVARKQRTSKILVRNIPFQANVREIR 832
Query: 294 LFFESVCGEVQRLRL 308
F S GE++ +RL
Sbjct: 833 ELF-STFGELKTVRL 846
>gi|89885655|dbj|BAE86938.1| sex-lethal [Bombyx mori]
Length = 336
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 27/180 (15%)
Query: 59 AGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNF 118
+ AGG N N++ + + E +DL M + P+ + V G +
Sbjct: 54 SAAGGDTARTNLIVNYLPQNITE-------KDLYAMFVTIGPIESCRVMKDFKTGYSY-- 104
Query: 119 NPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIR 178
GFG+ N F D + NGY +R+ + D++
Sbjct: 105 --------GFGFVN-FTREEDAARAIDTF-------NGYQLRNKRLKVSYARPSGDDIKE 148
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
+YV+++ + +T++QL T+F G++V I D NS AFV + E A+ A++
Sbjct: 149 TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIA 208
>gi|112734730|ref|NP_001036780.1| sex-lethal isoform L [Bombyx mori]
gi|77379388|gb|ABA71351.1| sex-lethal isoform 1 [Bombyx mori]
Length = 336
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 42/180 (23%), Positives = 74/180 (41%), Gaps = 27/180 (15%)
Query: 59 AGAGGGFVNVNASDNHMERKMGESFKDCEMRDLVDMLSKLNPMAAEFVPPSLANGQIFNF 118
+ AGG N N++ + + E +DL M + P+ + V G +
Sbjct: 54 SAAGGDTARTNLIVNYLPQNITE-------KDLYAMFVTIGPIESCRVMKDFKTGYSY-- 104
Query: 119 NPAFFGPNGFGYTNNFIMHTDGTANTNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIR 178
GFG+ N F D + NGY +R+ + D++
Sbjct: 105 --------GFGFVN-FTREEDAARAIDTF-------NGYQLRNKRLKVSYARPSGDDIKE 148
Query: 179 RTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR--FAFVEFTDEEGARAALS 236
+YV+++ + +T++QL T+F G++V I D NS AFV + E A+ A++
Sbjct: 149 TNLYVTNLPRAITDDQLETIFGKYGRIVQKHILRDKNSGTPRGVAFVRYDKREEAQEAIA 208
>gi|392512575|emb|CAD26218.2| NUCLEOLAR PROTEIN OF THE GAR FAMILY [Encephalitozoon cuniculi
GB-M1]
Length = 270
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 44/150 (29%), Positives = 68/150 (45%), Gaps = 22/150 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQV--VDCRICGDPNSVLRFAFVEFTDEEGARAALSL 237
TV++ I +TE L + G+V V + D F +VEF EE + AL L
Sbjct: 65 TVFIKGISYDLTEYDLKSEMEKIGKVARVGIPMTNDHKRNKGFGYVEFCKEEDVKKALKL 124
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
GT+ L + + + PR+ ER TIY +NI + + D+K +FE
Sbjct: 125 DGTVF-------LGREVVVNMAH----PRANKER----HTIYVSNIPYECDKRDLKKYFE 169
Query: 298 SVCGEVQRLRLLGDYQHSTRI---AFVEFA 324
+ GEV + L D + + R+ FV+F
Sbjct: 170 GM-GEVVGMSLPYD-RDNNRLKGYGFVDFG 197
>gi|341882512|gb|EGT38447.1| hypothetical protein CAEBREN_12601 [Caenorhabditis brenneri]
Length = 84
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 39/76 (51%), Gaps = 9/76 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEEGA-RA 233
+VYV ++ Q TEE + F T G V + RI G P FAFVE+TDE GA RA
Sbjct: 7 SVYVGNVPYQGTEEDIGNYFSTVGVVNNVRIVYDRETGRPRG---FAFVEYTDESGAQRA 63
Query: 234 ALSLAGTMLGFYPVRV 249
L GT +RV
Sbjct: 64 VQELNGTSFNGRNLRV 79
>gi|148698436|gb|EDL30383.1| mCG5546, isoform CRA_b [Mus musculus]
Length = 580
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +A
Sbjct: 99 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYA 158
Query: 222 FVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F +E A A+ + G +L V V F R E E E+ ++
Sbjct: 159 FVHFETQEAADKAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGAKAKEF 207
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N ++V G++K F S G+ ++++ D ++ FV +
Sbjct: 208 TNVYIKNFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSY 255
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE L F G V+ R+C D L +A+V F A AL +
Sbjct: 29 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 88
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ ++ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 89 MNFDVMKGKPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKALY 133
Query: 297 E--SVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ S G + +++ D S AFV F
Sbjct: 134 DTFSAFGNILSCKVVCDENGSKGYAFVHF 162
>gi|358055630|dbj|GAA98461.1| hypothetical protein E5Q_05147 [Mixia osmundae IAM 14324]
Length = 1071
Score = 45.8 bits (107), Expect = 0.026, Method: Composition-based stats.
Identities = 39/152 (25%), Positives = 70/152 (46%), Gaps = 10/152 (6%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRFAFVEFTDEEGARAALS 236
R T YV++ + ++ + TLF G+++ R NS RF +++F A +AL+
Sbjct: 739 RSTCYVTNFPESSEDKDIRTLFEPYGEILATRWPSKRFNSARRFCYIQFVSPASAESALA 798
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L GT L P + ++ R+ + + R I + + V + D++ F
Sbjct: 799 LHGTELE-------PKRKLSVYISDPDRKRARTDADTHRREILVSQLTPFVKEYDLRKLF 851
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEFAMVS 327
+ CG V +R+ D + R AFV+F V+
Sbjct: 852 -TPCGVVTAIRIQTDAKGLCRGAAFVDFEDVA 882
Score = 42.4 bits (98), Expect = 0.34, Method: Composition-based stats.
Identities = 33/91 (36%), Positives = 40/91 (43%), Gaps = 5/91 (5%)
Query: 151 RRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRI 210
+RK + Y R RT + RR + VS + V E L LF CG V RI
Sbjct: 807 KRKLSVYISDPDRKRARTDA----DTHRREILVSQLTPFVKEYDLRKLFTPCGVVTAIRI 862
Query: 211 CGDPNSVLR-FAFVEFTDEEGARAALSLAGT 240
D + R AFV+F D GA AL L T
Sbjct: 863 QTDAKGLCRGAAFVDFEDVAGAAKALELNNT 893
>gi|297845300|ref|XP_002890531.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
gi|297336373|gb|EFH66790.1| PAB3 binding protein 3 [Arabidopsis lyrata subsp. lyrata]
Length = 659
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 54/121 (44%), Gaps = 17/121 (14%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPN-SVLRFAFVEFTDEEGA-RAALSL 237
++Y D+D +VTE L LF VV R+C D N L +A++ F++ A RA +L
Sbjct: 50 SLYAGDLDPKVTEAHLFDLFKHVANVVSVRVCRDQNRRSLGYAYINFSNPNDAYRAMEAL 109
Query: 238 AGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFE 297
T L P+R++ S R R I+ N+D + D K FE
Sbjct: 110 NYTPLFERPIRIMLSN------------RDPSTRLSGKGNIFIKNLDASI---DNKALFE 154
Query: 298 S 298
+
Sbjct: 155 T 155
>gi|224106327|ref|XP_002314131.1| predicted protein [Populus trichocarpa]
gi|222850539|gb|EEE88086.1| predicted protein [Populus trichocarpa]
Length = 139
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 54/100 (54%), Gaps = 9/100 (9%)
Query: 144 TNGHTTTRRKRNGYSQGKRRMNCRTSNAQQDEVIRRTVYVSDIDQQVTEEQLATLFLTCG 203
+ GH T R N ++ + TSN +DE I+ T+YV +D +++E+ L+ F G
Sbjct: 4 SKGHLATVRTYNVFTHHPSK---HTSNPPEDESIK-TLYVGGLDARISEQHLSDHFYAHG 59
Query: 204 QVVDCRICGDPNSVLRFAFVEFTDEEGA-RAALSLAGTML 242
++ ++ P+ + AFV +T EGA +AA LA ++
Sbjct: 60 EIESIKMV--PHRAI--AFVTYTTREGAEKAAEQLADKLV 95
>gi|70990636|ref|XP_750167.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|74669855|sp|Q4WK03.1|PABP_ASPFU RecName: Full=Polyadenylate-binding protein, cytoplasmic and
nuclear; Short=PABP; Short=Poly(A)-binding protein;
AltName: Full=Polyadenylate tail-binding protein
gi|66847799|gb|EAL88129.1| polyadenylate-binding protein [Aspergillus fumigatus Af293]
gi|159130644|gb|EDP55757.1| polyadenylate-binding protein [Aspergillus fumigatus A1163]
Length = 753
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP-NSVLRF 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + +
Sbjct: 123 CRIMWSQRDPALRKTGQGNVFIKNLDAAIDNKALHDTFAAFGNILSCKVAQDEFGNSKGY 182
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + +
Sbjct: 183 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNV 235
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
Y NID++VT + + FE GE+ L D + +R FV F+
Sbjct: 236 YIKNIDQEVTDEEFRKMFEKF-GEITSATLSRDQEGKSRGFGFVNFS 281
Score = 45.1 bits (105), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 53 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 112
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 113 LNYTLIKGKPCRIMWSQ 129
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAAL 235
VY+ +IDQ+VT+E+ +F G++ + D R F FV F+ + A+AA+
Sbjct: 235 VYIKNIDQEVTDEEFRKMFEKFGEITSATLSRDQEGKSRGFGFVNFSTHDSAQAAV 290
>gi|425768240|gb|EKV06770.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum Pd1]
gi|425770410|gb|EKV08883.1| Nuclear and cytoplasmic polyadenylated RNA-binding protein pub1
[Penicillium digitatum PHI26]
Length = 482
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVL-----RFAFVEFTDEE 229
E +R +YV +D +VTE+ L +F T G VV +I D N + FVEF D
Sbjct: 87 EPNKRALYVGGLDPRVTEDILKQIFETTGHVVSVKIIPDKNGQFTTKGHNYGFVEFDDPG 146
Query: 230 GA-RAALSLAGTMLGFYPVRV 249
A RA +L G + +RV
Sbjct: 147 AAERAMQTLNGRRIHQSEIRV 167
>gi|225442420|ref|XP_002277538.1| PREDICTED: polyadenylate-binding protein, cytoplasmic and
nuclear-like [Vitis vinifera]
Length = 630
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 48/93 (51%), Gaps = 10/93 (10%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGAR 232
E+ + +YV D+D +V+E +L +F G +V R+C D S L +A+V F A
Sbjct: 25 ELHKAALYVGDLDPEVSEVELVDVFSGMGPLVSVRLCRDSLSGKSLCYAYVNFFHPSDAS 84
Query: 233 AALS-LAGTMLGFYPVRV-------LPSKTAIA 257
AL+ L T L P+R+ LP KT +A
Sbjct: 85 KALACLNHTKLMGKPMRIMWSHRDPLPRKTGLA 117
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 37/64 (57%), Gaps = 2/64 (3%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEF-TDEEGARAALSLA 238
+YV ++D V +++L F +CGQ+ ++ + + + F FV F T EE +A +L
Sbjct: 311 LYVKNLDASVDDDKLQEHFSSCGQITSAKVMRHDSGLSKGFGFVCFSTSEEAQKALTTLN 370
Query: 239 GTML 242
GT+L
Sbjct: 371 GTLL 374
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 69/163 (42%), Gaps = 15/163 (9%)
Query: 167 RTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFAF 222
R + +D + R+T ++V ++D + L +F G ++ C++ + F F
Sbjct: 101 RIMWSHRDPLPRKTGLANLFVKNLDPSINSASLQDIFCKFGNILSCKVAEENGKSKCFGF 160
Query: 223 VEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCT 281
V+F ++ A AAL +L TML K R E E +Y
Sbjct: 161 VQFDSDDSATAALNALNDTMLD--------GKKLFVSKFVKKCERKEASEETKFTNVYVK 212
Query: 282 NIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
N+ + +T+ I+ F S G+V + ++ D +R FV F
Sbjct: 213 NLGEDLTEDIIRDKF-SEFGKVGTVVIMKDGNGKSRGFGFVNF 254
>gi|452822947|gb|EME29962.1| heterogeneous nuclear ribonucleoprotein A1/A3 [Galdieria
sulphuraria]
Length = 368
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 13/148 (8%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAALSLA 238
++V + + TEE L F + G+V+DC I D ++ F FV F EE A A +
Sbjct: 52 IFVGGLSWETTEETLQKYFESYGRVLDCVIMRDKHTGHPRGFGFVTFEKEESADRAATKR 111
Query: 239 GTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFFES 298
+ G R + +K A+ ++ RS+ + +R I+ + T+ D +FE
Sbjct: 112 HELDG----RQVEAKKAVPKAE--YITRSQVTK--PTRKIFVGGLPLSCTEEDFMEYFER 163
Query: 299 VCGEVQRLRLLGDYQH--STRIAFVEFA 324
+ G V ++ D+Q S FV F+
Sbjct: 164 L-GHVVEAHIMYDHQTGISRGFGFVTFS 190
>gi|380018099|ref|XP_003692973.1| PREDICTED: polyadenylate-binding protein 2-like [Apis florea]
Length = 228
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG V I G P FA++EF + +
Sbjct: 96 EVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYIEFAERD 152
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ A+++ +M ++V+P +T
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|297821595|ref|XP_002878680.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
gi|297324519|gb|EFH54939.1| PAB4 binding protein 4 [Arabidopsis lyrata subsp. lyrata]
Length = 655
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 17/148 (11%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTDEEGARAAL-S 236
++YV D+D VT+ QL F QVV R+C D N+ L + +V +++ E A A+
Sbjct: 42 SLYVGDLDFNVTDSQLYDYFTEVCQVVSVRVCRDAATNTSLGYGYVNYSNTEDAEKAMQK 101
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
L + L +R+ T+ R R ++ N+DK V + F
Sbjct: 102 LNYSTLNGKMIRI------------TYSSRDSSARRSGVGNLFVKNLDKSVDNKTLHETF 149
Query: 297 ESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
S CG + ++ D+ +R FV+F
Sbjct: 150 -SGCGTIVSCKVAADHMGQSRGYGFVQF 176
Score = 42.4 bits (98), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 181 VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA-FVEFT-DEEGARAALSLA 238
+YV ++D VT+E+L LF G + C++ DP+ + + FV F+ E +R +
Sbjct: 325 LYVKNLDDTVTDEKLRELFAEFGTITSCKVMRDPSGTSKGSGFVAFSAASEASRVLNEMN 384
Query: 239 GTMLGFYPVRV 249
G M+G P+ V
Sbjct: 385 GKMVGGKPLYV 395
>gi|255940906|ref|XP_002561222.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211585845|emb|CAP93573.1| Pc16g09030 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 734
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 41/167 (24%), Positives = 71/167 (42%), Gaps = 16/167 (9%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-F 220
CR +Q+D +R+T V++ ++D + + L F G ++ C++ D + + +
Sbjct: 116 CRIMWSQRDPALRKTGQGNVFIKNLDNAIDNKALHDTFAAFGNILSCKVAQDEFANSKGY 175
Query: 221 AFVEFTDEEGARAALSLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSR--TI 278
FV + E A A+ ML L K + + R EM + I
Sbjct: 176 GFVHYETAEAANNAIKHVNGML-------LNDKKVFVGHHISKKDRQSKFEEMKANFTNI 228
Query: 279 YCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEFA 324
Y NID ++T + + FE+ GE+ L D +R FV +A
Sbjct: 229 YIKNIDLEITDDEFRTMFEAF-GEITSATLSHDQDGKSRGFGFVNYA 274
Score = 45.4 bits (106), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 42/77 (54%), Gaps = 3/77 (3%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDP--NSVLRFAFVEFTD-EEGARAALS 236
++YV ++D VTE L LF + GQV R+C D L +A+V + + +G RA
Sbjct: 46 SLYVGELDPSVTEAMLYELFSSIGQVASIRVCRDAVTRRSLGYAYVNYNNTADGERALED 105
Query: 237 LAGTMLGFYPVRVLPSK 253
L T++ P R++ S+
Sbjct: 106 LNYTLIKGKPCRIMWSQ 122
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 51/113 (45%), Gaps = 21/113 (18%)
Query: 131 TNNFIMHTDGTANTN-----GHTTTRRKRNGYSQGK-RRMNCRTSNAQQDEVIRRTVYVS 184
NN I H +G + GH +++ R Q K M +N +Y+
Sbjct: 186 ANNAIKHVNGMLLNDKKVFVGHHISKKDR----QSKFEEMKANFTN----------IYIK 231
Query: 185 DIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLR-FAFVEFTDEEGARAALS 236
+ID ++T+++ T+F G++ + D + R F FV + + E A AA++
Sbjct: 232 NIDLEITDDEFRTMFEAFGEITSATLSHDQDGKSRGFGFVNYANHESAEAAVA 284
>gi|15238140|ref|NP_196597.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|7671468|emb|CAB89408.1| RNA binding protein-like [Arabidopsis thaliana]
gi|28393013|gb|AAO41941.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|28827384|gb|AAO50536.1| putative polyadenylate-binding protein II (PAB2) [Arabidopsis
thaliana]
gi|332004146|gb|AED91529.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 217
Score = 45.8 bits (107), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC----GDPNSVLRFAFVEFTDE 228
++EV R+VYV ++D T E++ F TCG V I G P FA+VEF +
Sbjct: 83 KEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKG---FAYVEFVEV 139
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAI 256
E + AL L + L ++V P +T +
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRTNV 167
>gi|66512323|ref|XP_393066.2| PREDICTED: polyadenylate-binding protein 2 [Apis mellifera]
Length = 228
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 43/85 (50%), Gaps = 8/85 (9%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC-----GDPNSVLRFAFVEFTDEE 229
EV R++YV ++D T E+L F CG V I G P FA++EF + +
Sbjct: 96 EVDNRSIYVGNVDYGATAEELEQHFHGCGSVNRVTILCNKFDGHPKG---FAYIEFAERD 152
Query: 230 GARAALSLAGTMLGFYPVRVLPSKT 254
+ A+++ +M ++V+P +T
Sbjct: 153 SVQTAMAMDESMFRGRQIKVMPKRT 177
>gi|30683122|ref|NP_850803.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
gi|332004145|gb|AED91528.1| RNA recognition motif-containing protein [Arabidopsis thaliana]
Length = 202
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 7/88 (7%)
Query: 173 QDEVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRIC----GDPNSVLRFAFVEFTDE 228
++EV R+VYV ++D T E++ F TCG V I G P FA+VEF +
Sbjct: 83 KEEVDARSVYVGNVDYACTPEEVQLHFQTCGTVNRVTILMDKFGQPKG---FAYVEFVEV 139
Query: 229 EGARAALSLAGTMLGFYPVRVLPSKTAI 256
E + AL L + L ++V P +T +
Sbjct: 140 EAVQEALQLNESELHGRQLKVSPKRTNV 167
>gi|294926226|ref|XP_002779060.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239887927|gb|EER10855.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 242
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 178 RRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNS--VLRFAFVEFTDEEGARAAL 235
RR++YV ++D E+L F +CG + I D S FA++EF DE + AL
Sbjct: 115 RRSIYVGNVDYGSAPEELQEHFKSCGSIQRITIMVDKYSGHPKGFAYIEFGDEAAVQNAL 174
Query: 236 SLAGTMLGFYPVRVLPSKTAIAPVN 260
L TM ++VL +T + N
Sbjct: 175 LLNDTMFRGRQLKVLQKRTNLPGYN 199
>gi|22507391|ref|NP_683717.1| polyadenylate-binding protein 4 isoform 2 [Mus musculus]
gi|16307591|gb|AAH10345.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
Length = 615
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +A
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYA 141
Query: 222 FVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F +E A A+ + G +L V V F R E E E+ ++
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGAKAKEF 190
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N ++V G++K F S G+ ++++ D ++ FV +
Sbjct: 191 TNVYIKNFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSY 238
Score = 41.6 bits (96), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE L F G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ ++ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDVMKGKPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKALY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ S G + +++ D S AFV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYAFVHF 145
>gi|340522219|gb|EGR52452.1| predicted protein [Trichoderma reesei QM6a]
Length = 477
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 42/77 (54%), Gaps = 2/77 (2%)
Query: 175 EVIRRTVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSV-LRFAFVEFTDEEGA-R 232
E +R +YV +DQ+VTE+ L +F T G V + +I D N+ + FVE+ D A R
Sbjct: 71 EPNKRALYVGGLDQRVTEDVLRQIFETTGHVQNVKIIPDKNAKGYNYGFVEYDDPGAAER 130
Query: 233 AALSLAGTMLGFYPVRV 249
A +L G + +RV
Sbjct: 131 AMQTLNGRRVHQSEIRV 147
>gi|34419622|ref|NP_570951.2| polyadenylate-binding protein 4 isoform 1 [Mus musculus]
gi|33991671|gb|AAH56432.1| Poly(A) binding protein, cytoplasmic 4 [Mus musculus]
gi|148698437|gb|EDL30384.1| mCG5546, isoform CRA_c [Mus musculus]
Length = 660
Score = 45.8 bits (107), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 76/169 (44%), Gaps = 23/169 (13%)
Query: 166 CRTSNAQQDEVIRRT----VYVSDIDQQVTEEQLATLFLTCGQVVDCRICGDPNSVLRFA 221
R +Q+D +R++ V++ ++D+ + + L F G ++ C++ D N +A
Sbjct: 82 IRIMWSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYA 141
Query: 222 FVEFTDEEGARAAL-SLAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRT--- 277
FV F +E A A+ + G +L V V F R E E E+ ++
Sbjct: 142 FVHFETQEAADKAIEKMNGMLLNDRKVFV-----------GRFKSRKEREAELGAKAKEF 190
Query: 278 --IYCTNIDKKVTQGDIKLFFESVCGEVQRLRLLGDYQHSTR-IAFVEF 323
+Y N ++V G++K F S G+ ++++ D ++ FV +
Sbjct: 191 TNVYIKNFGEEVDDGNLKELF-SQFGKTLSVKVMRDSSGKSKGFGFVSY 238
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 20/149 (13%)
Query: 180 TVYVSDIDQQVTEEQLATLFLTCGQVVDCRICGD--PNSVLRFAFVEFTDEEGARAAL-S 236
++YV D+ VTE L F G V+ R+C D L +A+V F A AL +
Sbjct: 12 SLYVGDLHSDVTEAMLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 71
Query: 237 LAGTMLGFYPVRVLPSKTAIAPVNPTFLPRSEDEREMCSRTIYCTNIDKKVTQGDIKLFF 296
+ ++ P+R++ S+ R R+ ++ N+DK + D K +
Sbjct: 72 MNFDVMKGKPIRIMWSQ------------RDPSLRKSGVGNVFIKNLDKSI---DNKALY 116
Query: 297 E--SVCGEVQRLRLLGDYQHSTRIAFVEF 323
+ S G + +++ D S AFV F
Sbjct: 117 DTFSAFGNILSCKVVCDENGSKGYAFVHF 145
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.393
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,321,142,188
Number of Sequences: 23463169
Number of extensions: 228097745
Number of successful extensions: 854553
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 3691
Number of HSP's that attempted gapping in prelim test: 844236
Number of HSP's gapped (non-prelim): 11508
length of query: 337
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 194
effective length of database: 9,003,962,200
effective search space: 1746768666800
effective search space used: 1746768666800
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 77 (34.3 bits)