BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019692
(337 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|343887284|dbj|BAK61830.1| NOL1/NOP2/sun family protein [Citrus unshiu]
Length = 534
Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust.
Identities = 288/325 (88%), Positives = 289/325 (88%), Gaps = 35/325 (10%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS
Sbjct: 124 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 183
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW
Sbjct: 184 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 243
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA----------- 188
KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA
Sbjct: 244 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAKFKVLLFVMMH 303
Query: 189 ------------------------NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
+IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT
Sbjct: 304 YLYSMIHAFQLLSILFRNSLNQPEDIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 363
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE
Sbjct: 364 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 423
Query: 285 NEDVIKSVLPIAMSFGFQLATPFPN 309
NEDVIKSVLPIAMSFGFQLATPFP
Sbjct: 424 NEDVIKSVLPIAMSFGFQLATPFPQ 448
>gi|359476259|ref|XP_002279425.2| PREDICTED: putative methyltransferase NSUN5-like [Vitis vinifera]
Length = 508
Score = 486 bits (1252), Expect = e-135, Method: Compositional matrix adjust.
Identities = 232/290 (80%), Positives = 259/290 (89%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
VGDAEKFL+L K AIQLALA+LLVR KVK +EDLMALYQ PDV KPR+VRVNTLK+DV+S
Sbjct: 122 VGDAEKFLLLQKDAIQLALARLLVRKKVKRVEDLMALYQIPDVSKPRFVRVNTLKLDVES 181
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
A ELGKQ +VQKDD+VPDLLILPPG DLH HPL+ NG VF+QGKASSMVA AL P+PGW
Sbjct: 182 AFHELGKQNMVQKDDMVPDLLILPPGSDLHNHPLVRNGSVFMQGKASSMVAVALGPEPGW 241
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
+VLDACSAPGNKTVHLAALM GKGKI+ACEL+ ERV+RL+DT++LSGAANIEVLHGDFLN
Sbjct: 242 EVLDACSAPGNKTVHLAALMNGKGKIIACELDNERVKRLEDTVRLSGAANIEVLHGDFLN 301
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
L+P DP+YS+VRAILLDPSCSGSGT AERLDHLLPS+A+G D ERLNKL+AFQKK
Sbjct: 302 LNPMDPSYSKVRAILLDPSCSGSGTTAERLDHLLPSYAAGDATDVAGTERLNKLAAFQKK 361
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
AL HALSFP VE+VVYSTCSIHQ+ENEDVIKSVLP+A S GFQLATPFP
Sbjct: 362 ALEHALSFPAVEKVVYSTCSIHQIENEDVIKSVLPLAASHGFQLATPFPQ 411
>gi|296081680|emb|CBI20685.3| unnamed protein product [Vitis vinifera]
Length = 626
Score = 485 bits (1248), Expect = e-134, Method: Compositional matrix adjust.
Identities = 232/289 (80%), Positives = 259/289 (89%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
VGDAEKFL+L K AIQLALA+LLVR KVK +EDLMALYQ PDV KPR+VRVNTLK+DV+S
Sbjct: 122 VGDAEKFLLLQKDAIQLALARLLVRKKVKRVEDLMALYQIPDVSKPRFVRVNTLKLDVES 181
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
A ELGKQ +VQKDD+VPDLLILPPG DLH HPL+ NG VF+QGKASSMVA AL P+PGW
Sbjct: 182 AFHELGKQNMVQKDDMVPDLLILPPGSDLHNHPLVRNGSVFMQGKASSMVAVALGPEPGW 241
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
+VLDACSAPGNKTVHLAALM GKGKI+ACEL+ ERV+RL+DT++LSGAANIEVLHGDFLN
Sbjct: 242 EVLDACSAPGNKTVHLAALMNGKGKIIACELDNERVKRLEDTVRLSGAANIEVLHGDFLN 301
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
L+P DP+YS+VRAILLDPSCSGSGT AERLDHLLPS+A+G D ERLNKL+AFQKK
Sbjct: 302 LNPMDPSYSKVRAILLDPSCSGSGTTAERLDHLLPSYAAGDATDVAGTERLNKLAAFQKK 361
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
AL HALSFP VE+VVYSTCSIHQ+ENEDVIKSVLP+A S GFQLATPFP
Sbjct: 362 ALEHALSFPAVEKVVYSTCSIHQIENEDVIKSVLPLAASHGFQLATPFP 410
>gi|255550109|ref|XP_002516105.1| williams-beuren syndrome critical region protein, putative [Ricinus
communis]
gi|223544591|gb|EEF46107.1| williams-beuren syndrome critical region protein, putative [Ricinus
communis]
Length = 497
Score = 448 bits (1152), Expect = e-123, Method: Compositional matrix adjust.
Identities = 212/289 (73%), Positives = 251/289 (86%), Gaps = 4/289 (1%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
VGD EKFL+ K +Q ALA++LVR K K+I+DL+ALY+ PDV KP YVRVNTLK DVDS
Sbjct: 126 VGDVEKFLLRRKNDLQRALAKVLVRKKAKTIDDLLALYRPPDVSKPCYVRVNTLKSDVDS 185
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
A+LELG+QF VQKDD+VP+L +LPP DLH HPL+++G +F+QGKASSMVA AL PKPGW
Sbjct: 186 ALLELGRQFTVQKDDMVPNLFVLPPNSDLHNHPLVLDGSIFVQGKASSMVAVALDPKPGW 245
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
+VLDACSAPGNKTVH+AALM+GKG+I+ACELNK+R++RL+DT++LSGAANIEV H DFLN
Sbjct: 246 EVLDACSAPGNKTVHVAALMRGKGRIIACELNKDRIKRLEDTVRLSGAANIEVRHCDFLN 305
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
L+P+D +S++RAILLDPSCSGSGTAA+RLDHLLPSHA+ DP MERL KL+AFQKK
Sbjct: 306 LNPRDSPFSKIRAILLDPSCSGSGTAAQRLDHLLPSHAT----DPNNMERLKKLAAFQKK 361
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
AL HALSFP VERVVYSTCSI+Q ENEDVI S+LPIA S GFQL TPFP
Sbjct: 362 ALAHALSFPAVERVVYSTCSINQTENEDVIISILPIAASHGFQLVTPFP 410
>gi|224092121|ref|XP_002309481.1| predicted protein [Populus trichocarpa]
gi|222855457|gb|EEE93004.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 439 bits (1128), Expect = e-120, Method: Compositional matrix adjust.
Identities = 213/288 (73%), Positives = 248/288 (86%), Gaps = 5/288 (1%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
GDAEKFL K A+Q ALA+L+VR K K+I+D +ALYQ PD+ KP YVRVNTLK+DVDSA
Sbjct: 116 GDAEKFLACRKDAMQSALAKLVVRKKAKNIDDFIALYQPPDITKPCYVRVNTLKLDVDSA 175
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ ELGKQF VQKDD++P LL+LPP DLH H L++NG +F+QGKASSMVAA L PKPGW+
Sbjct: 176 LHELGKQFKVQKDDMIPHLLVLPPHTDLHNHSLVLNGSIFVQGKASSMVAAVLDPKPGWE 235
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
VLDACSAPGNKTVHLAALMKGKGKI+ACELNK+R +RL+DTI+LSGAANIEVLHGDFLN+
Sbjct: 236 VLDACSAPGNKTVHLAALMKGKGKIIACELNKDRAKRLEDTIRLSGAANIEVLHGDFLNI 295
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
DPK P +S+V AILLDPSCSGSGTAA+RLDHLLPS T D + ERLNKL+AFQKKA
Sbjct: 296 DPKGP-FSKVSAILLDPSCSGSGTAAQRLDHLLPS----RTTDVVDTERLNKLAAFQKKA 350
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
L HALSF V+R+VYSTCSI+Q+ENEDV+ S+LP+A S GFQLATPFP
Sbjct: 351 LAHALSFTAVKRIVYSTCSINQIENEDVVNSILPLATSNGFQLATPFP 398
>gi|449447153|ref|XP_004141333.1| PREDICTED: putative methyltransferase NSUN5-like [Cucumis sativus]
gi|449529369|ref|XP_004171672.1| PREDICTED: putative methyltransferase NSUN5-like [Cucumis sativus]
Length = 509
Score = 431 bits (1109), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/289 (71%), Positives = 246/289 (85%), Gaps = 2/289 (0%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQT-PDVPKPRYVRVNTLKMDVDS 79
GDAEKFLM + A+Q A+ QLL + K +IEDL+A P V +PR+VRVNTLKMDV +
Sbjct: 125 GDAEKFLMRQQSALQSAVTQLLSKKKANNIEDLIARGDDGPGVSRPRFVRVNTLKMDVHT 184
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
A+ ELGK++ VQKDD+V DLLILPPG DLH HPL+ +G +FLQGKASSMVA AL PKPGW
Sbjct: 185 AIEELGKRYAVQKDDMVSDLLILPPGSDLHDHPLVADGSIFLQGKASSMVAVALDPKPGW 244
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
+VLDACSAPGNKTVHLA+LM GKG+++ACELN+ RV+RL+ TIKLSGA+NI+VLHGDFLN
Sbjct: 245 EVLDACSAPGNKTVHLASLMHGKGRVIACELNENRVKRLRHTIKLSGASNIDVLHGDFLN 304
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
L+PKDP+ S+VRAILLDPSCSGSGTAA RLDHLLPSHA G T ++ERLNKL+AFQ+K
Sbjct: 305 LNPKDPSLSKVRAILLDPSCSGSGTAAVRLDHLLPSHAEG-TISGDDLERLNKLAAFQRK 363
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
AL HA SFP VE++VYSTCSIHQ+ENEDV++SVLP+A S GFQL TPFP
Sbjct: 364 ALAHAFSFPAVEKIVYSTCSIHQIENEDVVQSVLPLAESRGFQLDTPFP 412
>gi|356507034|ref|XP_003522276.1| PREDICTED: putative methyltransferase NSUN5-like [Glycine max]
Length = 494
Score = 425 bits (1093), Expect = e-116, Method: Compositional matrix adjust.
Identities = 213/289 (73%), Positives = 254/289 (87%), Gaps = 3/289 (1%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
VGDAEK+LM H+ A++ L QLL++ VK+++ L+AL+Q PD+ PRYVRVNTLK+DVDS
Sbjct: 117 VGDAEKYLMRHQDALRSTLKQLLLQRNVKTVKQLIALHQVPDISVPRYVRVNTLKLDVDS 176
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
A+LEL K++ VQKD+L+PDLLILPPG DLH HPL+ NG +FLQGKASSM A AL+P+PGW
Sbjct: 177 ALLELQKKYSVQKDNLLPDLLILPPGTDLHDHPLVKNGSIFLQGKASSMAAPALSPEPGW 236
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
+VLDAC+APGNKTVHLAALMK KGKI+ACEL KER++RLKDTIKLSGA+NI+VL+ DFLN
Sbjct: 237 EVLDACAAPGNKTVHLAALMKRKGKIIACELQKERIKRLKDTIKLSGASNIQVLNDDFLN 296
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
L+PKDP+YS+V+AILLDPSCSGSGTAA RLDHLLPS A+G AD MERLNKL+ FQ+K
Sbjct: 297 LNPKDPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQDAD---MERLNKLATFQRK 353
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
AL+HAL FP VER+VYSTCSI+Q+ENEDVIKSVLPIA S GFQLA PFP
Sbjct: 354 ALQHALLFPAVERIVYSTCSINQIENEDVIKSVLPIAESNGFQLAKPFP 402
>gi|30690149|ref|NP_851079.1| NOL1/NOP2/sun family protein [Arabidopsis thaliana]
gi|30690152|ref|NP_197990.2| NOL1/NOP2/sun family protein [Arabidopsis thaliana]
gi|26450438|dbj|BAC42333.1| unknown protein [Arabidopsis thaliana]
gi|30793929|gb|AAP40417.1| unknown protein [Arabidopsis thaliana]
gi|332006150|gb|AED93533.1| NOL1/NOP2/sun family protein [Arabidopsis thaliana]
gi|332006151|gb|AED93534.1| NOL1/NOP2/sun family protein [Arabidopsis thaliana]
Length = 567
Score = 416 bits (1070), Expect = e-114, Method: Compositional matrix adjust.
Identities = 204/290 (70%), Positives = 242/290 (83%), Gaps = 2/290 (0%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
+GDAEKFLM HK A+ LA LLVR KV S++ L+ T + KPRYVRVNTLKMDVDS
Sbjct: 188 IGDAEKFLMRHKEALLSGLATLLVRKKVDSVDQLLGSKLTGHL-KPRYVRVNTLKMDVDS 246
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
AV EL K + VQKD+ VPDLL+LPPG DLH H L+ NG +FLQGKASSMVAAAL P+ GW
Sbjct: 247 AVQELEKHYTVQKDETVPDLLVLPPGSDLHAHRLVANGRIFLQGKASSMVAAALQPQAGW 306
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
+VLDACSAPGNKT+HLAALM+G+GKI+ACELN+ERV+RL+ TIKLSGA+NIEV HGDFL
Sbjct: 307 EVLDACSAPGNKTIHLAALMEGQGKIIACELNEERVKRLEHTIKLSGASNIEVCHGDFLG 366
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
L+PKDP+++++RAILLDPSCSGSGT +RLDHLLPSH+ + + M RL+KL+ FQKK
Sbjct: 367 LNPKDPSFAKIRAILLDPSCSGSGTITDRLDHLLPSHSEDNNMNYDSM-RLHKLAVFQKK 425
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
AL HALSFP VERVVYSTCSI+Q+ENEDV+ SVLP+A S GF+LATPFP
Sbjct: 426 ALAHALSFPKVERVVYSTCSIYQIENEDVVSSVLPLASSLGFKLATPFPQ 475
>gi|297808641|ref|XP_002872204.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318041|gb|EFH48463.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 514
Score = 416 bits (1068), Expect = e-113, Method: Compositional matrix adjust.
Identities = 202/290 (69%), Positives = 241/290 (83%), Gaps = 2/290 (0%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
+GDAEKFLM HK A+ LA LLVR KV+S++ L+ L + KPRYVRVNTLKMDVDS
Sbjct: 134 IGDAEKFLMRHKDALLSGLATLLVRKKVESVDQLLGLSKLNGHLKPRYVRVNTLKMDVDS 193
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
AV EL K + VQ+D+ VPDLL+LPPG DLH H L+ NG +FLQGKASSMVAAAL P+ GW
Sbjct: 194 AVQELEKHYTVQRDETVPDLLVLPPGSDLHAHRLVANGRIFLQGKASSMVAAALQPEAGW 253
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
+VLDACSAPGNKT+HLAALM+G+GKI+ACELN+ERV+RL+ TIKLSGA+NI+V HGDFL
Sbjct: 254 EVLDACSAPGNKTIHLAALMQGQGKIIACELNEERVKRLEHTIKLSGASNIQVFHGDFLG 313
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
L+PKDP++ +VRAILLDPSCSGSGT +RLDHLLPSH++ + + RL+KL+ FQKK
Sbjct: 314 LNPKDPSFVKVRAILLDPSCSGSGTITDRLDHLLPSHSADNMN--YDSMRLHKLAVFQKK 371
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
AL HALSFP VERVVYSTCSIHQ+ENEDV+ SVL +A S GF+LATPFP
Sbjct: 372 ALAHALSFPQVERVVYSTCSIHQIENEDVVSSVLALASSLGFKLATPFPQ 421
>gi|356514695|ref|XP_003526039.1| PREDICTED: putative methyltransferase NSUN5-like [Glycine max]
Length = 502
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 211/298 (70%), Positives = 252/298 (84%), Gaps = 10/298 (3%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTP---------DVPKPRYVRV 70
VGDAEKFLM H+ A++ L QLL++ VK+++ L+AL+Q P DV PRYVRV
Sbjct: 114 VGDAEKFLMRHQDALRSTLKQLLLQRNVKTVKQLIALHQVPGHCSNSSCADVSVPRYVRV 173
Query: 71 NTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVA 130
NTLK+DVDSA+LEL K + VQKD L+PDLLILPPG DLH HPL+ NG +FLQGKASSM A
Sbjct: 174 NTLKLDVDSALLELQKNYSVQKDHLLPDLLILPPGTDLHDHPLVKNGSIFLQGKASSMAA 233
Query: 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190
AL+P+PGW+VLDAC+APGNKTVHLAALMK KGKI+ACEL +ER++RLKDTIKLSGA+NI
Sbjct: 234 PALSPEPGWEVLDACAAPGNKTVHLAALMKRKGKIIACELQRERIKRLKDTIKLSGASNI 293
Query: 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
+VL+ DFLN +PKDP+YS+V+AILLDPSCSGSGTAA RLDHLLPS A+ ++ D T+ ERL
Sbjct: 294 QVLNDDFLNQNPKDPSYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAANSQD-TDTERL 352
Query: 251 NKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
NKL+ FQ+KAL+HAL FP VER+VYSTCSI+Q+ENEDVIKSVLPIA S GFQLA PFP
Sbjct: 353 NKLATFQRKALQHALLFPAVERIVYSTCSINQIENEDVIKSVLPIAESNGFQLAKPFP 410
>gi|357465793|ref|XP_003603181.1| NOL1/NOP2/Sun domain family member 5B [Medicago truncatula]
gi|355492229|gb|AES73432.1| NOL1/NOP2/Sun domain family member 5B [Medicago truncatula]
Length = 509
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 206/289 (71%), Positives = 249/289 (86%), Gaps = 3/289 (1%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
VGDAEK+LM HK A+ L L ++L++ VK++++L AL++ PDV PR VRVNTLK+DVDS
Sbjct: 127 VGDAEKYLMRHKEALHLHLKKILLQKNVKTVKELFALHEVPDVSVPRNVRVNTLKLDVDS 186
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
A++EL K++ VQKDDL+ DLLILPPG DLH HPL+ NG +FLQGKASSMVA AL+P+PGW
Sbjct: 187 ALVELRKKYSVQKDDLLHDLLILPPGTDLHDHPLVKNGSIFLQGKASSMVAPALSPEPGW 246
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
+VLDAC+APGNKTVHLAALMK KG+I+ACEL KER++RL DTIKLSGA NI+VL+ DFLN
Sbjct: 247 EVLDACAAPGNKTVHLAALMKRKGRIIACELKKERIKRLNDTIKLSGATNIQVLNEDFLN 306
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
++ KDPAYS+V+AILLDPSCSGSGTAA RLDHLLPS A+G D MERLNKL+AFQ+K
Sbjct: 307 INSKDPAYSKVKAILLDPSCSGSGTAASRLDHLLPSKAAGQNVD---MERLNKLAAFQRK 363
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
AL+HA FP +ERVVYSTCSI+Q+ENEDV+KSVLPIA S+GFQL PFP
Sbjct: 364 ALQHAFLFPALERVVYSTCSINQIENEDVVKSVLPIAESYGFQLVKPFP 412
>gi|218190325|gb|EEC72752.1| hypothetical protein OsI_06382 [Oryza sativa Indica Group]
Length = 479
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/289 (65%), Positives = 228/289 (78%), Gaps = 1/289 (0%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+ +MLHK I AL ++ +R KV+S+EDL++ +T PKPR++RVNTL+ DS
Sbjct: 106 GSVEQLIMLHKDTIMAALEKMCIRRKVRSVEDLVSKKRTVK-PKPRFLRVNTLRTSTDSV 164
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
V EL K V KD+LVPDLL+LPPG DLH H L+ G VFLQGKAS MVA AL P+PGWK
Sbjct: 165 VEELNKIHKVDKDELVPDLLVLPPGTDLHNHHLVSEGKVFLQGKASCMVAVALCPEPGWK 224
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM G+G I ACELNKER + L++TI+ SGA NIE ++GDFL++
Sbjct: 225 VIDACAAPGNKTVHLAALMNGEGSITACELNKERTKTLQNTIRRSGANNIETINGDFLDI 284
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EVRAILLDPSCSGSG + ERLDHLLPSH+ G+ D + R+ KLSAFQ+KA
Sbjct: 285 DSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSRGNQDDASTSSRIRKLSAFQRKA 344
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
L HALSFP VERVVYSTCSIHQ ENEDV+ SVLP+A S GF+LATPFP
Sbjct: 345 LSHALSFPSVERVVYSTCSIHQAENEDVVSSVLPLASSLGFELATPFPQ 393
>gi|222622433|gb|EEE56565.1| hypothetical protein OsJ_05902 [Oryza sativa Japonica Group]
Length = 505
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 188/288 (65%), Positives = 228/288 (79%), Gaps = 1/288 (0%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+ +MLHK I AL ++ +R KV+S+EDL++ +T PKPR++RVNTL+ DS
Sbjct: 132 GSVEQLIMLHKDTIMAALEKMCIRRKVRSVEDLVSKKRTVK-PKPRFLRVNTLRTSTDSV 190
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ EL K V KD+LVPDLL+LPPG DLH H L+ G VFLQGKAS MVA AL P+PGWK
Sbjct: 191 IEELNKIHKVDKDELVPDLLVLPPGTDLHNHHLVSEGKVFLQGKASCMVAVALCPEPGWK 250
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM G+G I ACELNKER + L++TI+ SGA NIE ++GDFL++
Sbjct: 251 VIDACAAPGNKTVHLAALMNGEGSITACELNKERTKTLQNTIRRSGANNIETINGDFLDI 310
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EVRAILLDPSCSGSG + ERLDHLLPSH+ G+ D + R+ KLSAFQ+KA
Sbjct: 311 DSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSRGNQDDASTSSRIRKLSAFQRKA 370
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
L HALSFP VERVVYSTCSIHQ ENEDV+ SVLP+A S GF+LATPFP
Sbjct: 371 LSHALSFPSVERVVYSTCSIHQAENEDVVSSVLPLASSLGFELATPFP 418
>gi|326494776|dbj|BAJ94507.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 509
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/289 (62%), Positives = 226/289 (78%), Gaps = 1/289 (0%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+++MLHK ++AL ++ V+ KV ++EDL++ +T PKPR+VRVNTLK S
Sbjct: 136 GSVEEYIMLHKDTFKIALQKICVKRKVSNVEDLLS-EKTTVKPKPRFVRVNTLKTTTGSV 194
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ L K V KD++VPD+L+LPPG D+H HPL+ +G V LQGKAS MVAAAL+P+PGWK
Sbjct: 195 IEVLSKMHKVDKDNIVPDMLVLPPGTDMHKHPLVTDGKVLLQGKASCMVAAALSPQPGWK 254
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM G+G I+ACELNKER + L+ T++ SGA NIE + GDFLN+
Sbjct: 255 VIDACAAPGNKTVHLAALMNGEGSIIACELNKERAKTLQHTVRKSGANNIETVIGDFLNI 314
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EVRAILLDPSCSGSG + ERLDHLLPSH+ D R+ KLSAFQ+KA
Sbjct: 315 DSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSIDDQGDAGSSARIRKLSAFQRKA 374
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
L HALSFP VER+VYSTCSIHQ ENEDV+ SVLP+A S GF+L+TPFP
Sbjct: 375 LSHALSFPSVERLVYSTCSIHQAENEDVVSSVLPLASSLGFELSTPFPQ 423
>gi|115445043|ref|NP_001046301.1| Os02g0217800 [Oryza sativa Japonica Group]
gi|113535832|dbj|BAF08215.1| Os02g0217800 [Oryza sativa Japonica Group]
Length = 501
Score = 385 bits (989), Expect = e-104, Method: Compositional matrix adjust.
Identities = 184/288 (63%), Positives = 225/288 (78%), Gaps = 5/288 (1%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+ +MLHK I AL ++ +R KV+S+EDL++ +T PKPR++RVNTL+ DS
Sbjct: 132 GSVEQLIMLHKDTIMAALEKMCIRRKVRSVEDLVSKKRTVK-PKPRFLRVNTLRTSTDSV 190
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ EL K V KD+LVPDLL+LPPG DLH H L+ G +GKAS MVA AL P+PGWK
Sbjct: 191 IEELNKIHKVDKDELVPDLLVLPPGTDLHNHHLVSEG----KGKASCMVAVALCPEPGWK 246
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM G+G I ACELNKER + L++TI+ SGA NIE ++GDFL++
Sbjct: 247 VIDACAAPGNKTVHLAALMNGEGSITACELNKERTKTLQNTIRRSGANNIETINGDFLDI 306
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EVRAILLDPSCSGSG + ERLDHLLPSH+ G+ D + R+ KLSAFQ+KA
Sbjct: 307 DSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSRGNQDDASTSSRIRKLSAFQRKA 366
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
L HALSFP VERVVYSTCSIHQ ENEDV+ SVLP+A S GF+LATPFP
Sbjct: 367 LSHALSFPSVERVVYSTCSIHQAENEDVVSSVLPLASSLGFELATPFP 414
>gi|226507554|ref|NP_001151492.1| NOL1R [Zea mays]
gi|195647210|gb|ACG43073.1| NOL1R [Zea mays]
Length = 498
Score = 381 bits (979), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/289 (61%), Positives = 225/289 (77%), Gaps = 1/289 (0%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+ +ML K +++ L ++ R +V+ +EDL++ ++ PKPR++RVNTLK+ +S
Sbjct: 134 GSVEQLIMLQKDSLRTTLDKVCARKRVRCVEDLLS-NKSAVKPKPRFLRVNTLKVTTESV 192
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ EL K +V KD++VPD+L+LPPG DLH HPL+ +G VFLQG+AS MVA AL PKPGWK
Sbjct: 193 IEELNKMHMVDKDEMVPDMLVLPPGTDLHNHPLVTDGKVFLQGRASCMVAVALCPKPGWK 252
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM G+G I+ACELNKER + L+ T++ SGA NI +++GDFL +
Sbjct: 253 VIDACAAPGNKTVHLAALMNGEGSIIACELNKERAKTLQHTVRRSGANNIRIVNGDFLEV 312
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EV AILLDPSCSGSG + ERLD+LLPSH+ D R+ KLSAFQKKA
Sbjct: 313 DRNDPSYAEVHAILLDPSCSGSGISTERLDYLLPSHSRDSQDDAGTSSRVMKLSAFQKKA 372
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
L HALSFP VERVVYSTCSIHQ ENEDVI SVLP+A S GF+LATPFP
Sbjct: 373 LSHALSFPSVERVVYSTCSIHQAENEDVINSVLPLATSLGFELATPFPQ 421
>gi|413936774|gb|AFW71325.1| NOL1R [Zea mays]
Length = 498
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/289 (61%), Positives = 225/289 (77%), Gaps = 1/289 (0%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+ +ML K +++ L ++ R +V+ +EDL++ ++ PKPR++RVNTLK+ +S
Sbjct: 134 GSVEQLIMLQKDSLRTTLDKVCARKRVRCVEDLLS-NKSAVKPKPRFLRVNTLKVTTESV 192
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ EL K +V KD++VPD+L+LPPG DLH HPL+ +G VFLQG+AS MVA AL PKPGWK
Sbjct: 193 IEELNKMHMVDKDEMVPDMLVLPPGTDLHNHPLVTDGKVFLQGRASCMVAVALCPKPGWK 252
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM G+G I+ACELNKER + L+ T++ SGA NI +++GDFL +
Sbjct: 253 VIDACAAPGNKTVHLAALMNGEGSIIACELNKERAKTLQHTVRRSGANNIRIVNGDFLEV 312
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EV AILLDPSCSGSG + ERLD+LLPSH+ D R+ KLSAFQKKA
Sbjct: 313 DRNDPSYAEVHAILLDPSCSGSGISTERLDYLLPSHSRDSQDDAGTSSRVMKLSAFQKKA 372
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
L HALSFP VERVVYSTCSIHQ ENEDVI SVLP+A S GF+LATPFP
Sbjct: 373 LSHALSFPSVERVVYSTCSIHQAENEDVINSVLPLATSLGFELATPFPQ 421
>gi|357139078|ref|XP_003571112.1| PREDICTED: putative methyltransferase NSUN5-like [Brachypodium
distachyon]
Length = 500
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/289 (63%), Positives = 225/289 (77%), Gaps = 5/289 (1%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+ +MLHK + AL ++ VR KV SI++L+ +T PKPR++RVNTLK +S
Sbjct: 133 GSVEQLIMLHKDTLMTALKKICVRKKVSSIQELLG-NKTTVKPKPRFLRVNTLKATTESV 191
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ EL K ++ KDD+VPD+L+LPPG DLH HPL+ +G +GKASSMVA AL PKPGWK
Sbjct: 192 IEELSKIHMIDKDDVVPDMLVLPPGTDLHNHPLVKDG----KGKASSMVAIALCPKPGWK 247
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM G+G IVACELNKERV+ L+ TI+ SGA NIE ++GDFL++
Sbjct: 248 VIDACAAPGNKTVHLAALMNGEGSIVACELNKERVKTLQHTIRRSGADNIETVNGDFLDI 307
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EVRAILLDPSCSGSG + ERLDHLLPSH+S D R+ KLSAFQ+K
Sbjct: 308 DSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSSDDQDDAGSSARIRKLSAFQRKV 367
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
L HALSFP VER+VYSTCSIHQ ENEDV+ SVLP+A S GF+LATPFP
Sbjct: 368 LSHALSFPSVERLVYSTCSIHQAENEDVVNSVLPLASSLGFELATPFPQ 416
>gi|242060966|ref|XP_002451772.1| hypothetical protein SORBIDRAFT_04g007580 [Sorghum bicolor]
gi|241931603|gb|EES04748.1| hypothetical protein SORBIDRAFT_04g007580 [Sorghum bicolor]
Length = 493
Score = 372 bits (955), Expect = e-100, Method: Compositional matrix adjust.
Identities = 176/288 (61%), Positives = 223/288 (77%), Gaps = 5/288 (1%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+ +M K +++ L ++ R KV EDL+ +T PKPR++RVNTLK+ +S
Sbjct: 132 GSVEQLIMQQKDSLRTTLDKVCARRKVSCAEDLLG-NKTAVKPKPRFLRVNTLKITTESV 190
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ EL K +V KDD++PD+L+LPPG DLH HPL+ +G +G+AS MVA AL+PKPGWK
Sbjct: 191 IEELNKIHMVDKDDMIPDMLVLPPGTDLHNHPLVTDG----KGRASCMVAVALSPKPGWK 246
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM GKG I+ACELNKER + L+ T++ SGA NI++++GDFL +
Sbjct: 247 VIDACAAPGNKTVHLAALMNGKGSIIACELNKERAKTLQHTVRRSGANNIQIVNGDFLEV 306
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EVRAILLDPSCSGSG + ERLD+LLPSH+ + D + R+ KLSAFQKKA
Sbjct: 307 DRNDPSYAEVRAILLDPSCSGSGISTERLDYLLPSHSRDNQDDASTSSRVMKLSAFQKKA 366
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
L HALSFP VERVVYSTCSIHQ ENEDV+ SVLP+A S GF+LATPFP
Sbjct: 367 LSHALSFPSVERVVYSTCSIHQAENEDVVNSVLPLATSLGFELATPFP 414
>gi|46805843|dbj|BAD17177.1| putative Williams Beuren syndrome critical region 20A isoform 1
[Oryza sativa Japonica Group]
Length = 472
Score = 337 bits (865), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 166/288 (57%), Positives = 205/288 (71%), Gaps = 34/288 (11%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G E+ +MLHK I AL ++ +R KV+S+EDL++ +T PKPR++RVNTL+ DS
Sbjct: 132 GSVEQLIMLHKDTIMAALEKMCIRRKVRSVEDLVSKKRTVK-PKPRFLRVNTLRTSTDSV 190
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ EL K +H +GKAS MVA AL P+PGWK
Sbjct: 191 IEELNK-----------------------IH----------KGKASCMVAVALCPEPGWK 217
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+DAC+APGNKTVHLAALM G+G I ACELNKER + L++TI+ SGA NIE ++GDFL++
Sbjct: 218 VIDACAAPGNKTVHLAALMNGEGSITACELNKERTKTLQNTIRRSGANNIETINGDFLDI 277
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
D DP+Y+EVRAILLDPSCSGSG + ERLDHLLPSH+ G+ D + R+ KLSAFQ+KA
Sbjct: 278 DSNDPSYAEVRAILLDPSCSGSGISTERLDHLLPSHSRGNQDDASTSSRIRKLSAFQRKA 337
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
L HALSFP VERVVYSTCSIHQ ENEDV+ SVLP+A S GF+LATPFP
Sbjct: 338 LSHALSFPSVERVVYSTCSIHQAENEDVVSSVLPLASSLGFELATPFP 385
>gi|168028404|ref|XP_001766718.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682150|gb|EDQ68571.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 504
Score = 323 bits (827), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 166/306 (54%), Positives = 214/306 (69%), Gaps = 17/306 (5%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK-PRYVRVNTLKMDVD 78
GDAEK ++ K A++ ALA+LLV+ V S E+L+ L P PRYVRVNTLKM
Sbjct: 110 TGDAEKQVLTRKSALRSALARLLVKRNVSSAEELLPLEAQNSGPAIPRYVRVNTLKMSTR 169
Query: 79 SAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKP 137
A+ L + V+ DDL+ DLL+LPPG DLH HPL++NG + LQGKAS M A AL+P
Sbjct: 170 KAITILRESIKDVEIDDLIQDLLVLPPGTDLHKHPLVLNGSIVLQGKASCMPAQALSPAC 229
Query: 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-------- 189
W+VLDAC+APGNKTVHLAALM G+GKI ACE+N++R +RL++T++L+GA N
Sbjct: 230 DWEVLDACAAPGNKTVHLAALMAGRGKITACEINEKRAQRLQETVRLTGATNFQIAETDF 289
Query: 190 ------IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
+ V DFL +DP P +++VR ILLDPSCSGSGT +RLDHLLPS A D
Sbjct: 290 PELDVDVTVRQQDFLTIDPTLPEFTKVRGILLDPSCSGSGTTVQRLDHLLPS-AGTDKND 348
Query: 244 PTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQL 303
E +R+ +L+ FQ+ AL HALSFP +E++VYSTCSIHQ ENEDV+ +VLP A GF+L
Sbjct: 349 DQEKDRIEQLARFQETALLHALSFPSLEKLVYSTCSIHQRENEDVVLAVLPHAKEKGFEL 408
Query: 304 ATPFPN 309
+ PFP+
Sbjct: 409 SNPFPS 414
>gi|384244792|gb|EIE18290.1| S-adenosyl-L-methionine-dependent methyltransferase [Coccomyxa
subellipsoidea C-169]
Length = 453
Score = 262 bits (670), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 139/304 (45%), Positives = 193/304 (63%), Gaps = 16/304 (5%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVP--KPRYVRVNTLKMDVD 78
G AE+ ++ + A++ LA +L V + +L++ +PR RVNTLKM V
Sbjct: 111 GPAERLVLSARPALEQELAAMLAEAGVANARELISESAQSAAAQRRPRSARVNTLKMSVA 170
Query: 79 SAVLEL----GKQFV--------VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
A+ L GKQ + V +D+L+PD+L+ PP DLH HPL+ N C+ LQ KAS
Sbjct: 171 EALTWLRTPKGKQHLKLAELGAQVTQDELLPDVLLFPPATDLHDHPLVKNSCLILQSKAS 230
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
M A AL P+PGW VLDAC+APGNKT HLAALM+GKG+++A + + +R++RLK +G
Sbjct: 231 CMPAHALEPQPGWDVLDACAAPGNKTTHLAALMEGKGRVLAFDKDPKRLKRLKANAAATG 290
Query: 187 AANIEVLHGDFLNLD-PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
A I DFL L P + VR L+DPSCSGSGT R+D LLPSHA+ H+ +
Sbjct: 291 ADCITARVADFLQLPLATSPEFRNVRGALVDPSCSGSGTTLSRMDFLLPSHAAQHSPR-S 349
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
E +R+ +L+ FQ+ + HAL+ P ++R+VYSTCS+H+ ENE V+ +VLP A GF+LA
Sbjct: 350 EGDRIERLARFQEAVVLHALTLPALQRLVYSTCSVHERENEAVVAAVLPRARELGFELAA 409
Query: 306 PFPN 309
PFP
Sbjct: 410 PFPG 413
>gi|302795624|ref|XP_002979575.1| hypothetical protein SELMODRAFT_111166 [Selaginella moellendorffii]
gi|300152823|gb|EFJ19464.1| hypothetical protein SELMODRAFT_111166 [Selaginella moellendorffii]
Length = 425
Score = 258 bits (658), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 139/294 (47%), Positives = 188/294 (63%), Gaps = 36/294 (12%)
Query: 17 LWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPKPRYVRVNTLKM 75
+ P G E F++ K A++ A +L+++ V I+ L+ + PRYVRVNTL++
Sbjct: 99 ILPSGKEEIFVLSRKAALRAAFVRLMMKKNVTEIDGLLPTESRQLQSYIPRYVRVNTLQI 158
Query: 76 DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAP 135
VD A+ +L + L KAS + A L+P
Sbjct: 159 TVDEALEKLEE----------------------------------LGSKASCIPAHVLSP 184
Query: 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG 195
P W+VLDAC++PGNKTVHLAALMKGKG++ ACEL+K+R++ L+DT+K +GA NI+V H
Sbjct: 185 DPDWEVLDACASPGNKTVHLAALMKGKGRVTACELHKKRLQVLQDTVKRAGANNIQVKHQ 244
Query: 196 DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSA 255
DFL LDP Y +VRAILLDPSCSGSGT +R+DHLLP A+G + + +R+++L++
Sbjct: 245 DFLKLDPNASDYRKVRAILLDPSCSGSGTTVQRMDHLLPV-ANGQSFFQHDAQRIDRLAS 303
Query: 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
FQK AL HALSFP VERVVYSTCS++Q ENEDV++SVL A S F+L T PN
Sbjct: 304 FQKAALCHALSFPAVERVVYSTCSVNQRENEDVVQSVLEHARSHKFKLGTVLPN 357
>gi|302791864|ref|XP_002977698.1| hypothetical protein SELMODRAFT_107682 [Selaginella moellendorffii]
gi|300154401|gb|EFJ21036.1| hypothetical protein SELMODRAFT_107682 [Selaginella moellendorffii]
Length = 425
Score = 255 bits (651), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 140/298 (46%), Positives = 189/298 (63%), Gaps = 44/298 (14%)
Query: 17 LWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK-----PRYVRVN 71
+ P G E F++ K A++ A +L+++ V I+ L+ P+ + PRYVRVN
Sbjct: 99 ILPSGKEEIFVLSRKAALRAAFVRLMMKKNVTEIDGLLP----PETRQIQSYIPRYVRVN 154
Query: 72 TLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAA 131
TL+M VD A+ +L + L KAS + A
Sbjct: 155 TLQMTVDEALEKLEE----------------------------------LGSKASCIPAH 180
Query: 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE 191
L P W+VLDAC++PGNKTVHLAALMKGKG++ ACEL+++R++ L+DT+K +GA NI+
Sbjct: 181 VLCPDLDWEVLDACASPGNKTVHLAALMKGKGRVTACELHRKRLQVLQDTVKRAGANNIQ 240
Query: 192 VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLN 251
V H DFL LDP YS+VRAILLDPSCSGSGT +R+DHLLP A+G + + +R++
Sbjct: 241 VKHQDFLKLDPNASDYSKVRAILLDPSCSGSGTTVQRMDHLLPV-ANGQSFVFSVFQRID 299
Query: 252 KLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
+L++FQK AL HALSFP VERVVYSTCS++Q ENEDVI+SVL A S F+L T P+
Sbjct: 300 RLASFQKAALCHALSFPAVERVVYSTCSVNQRENEDVIQSVLEHARSHKFKLGTVLPD 357
>gi|255071451|ref|XP_002499399.1| predicted protein [Micromonas sp. RCC299]
gi|226514662|gb|ACO60658.1| predicted protein, partial [Micromonas sp. RCC299]
Length = 408
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 124/271 (45%), Positives = 172/271 (63%), Gaps = 17/271 (6%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
VP+ R+VRVNTLK+ VD A L ++D V D+L+ PG DLH HP++ +G + L
Sbjct: 121 VPR-RHVRVNTLKLSVDEATRRLASHR-PKRDPHVSDVLVFKPGTDLHDHPMVRSGEIVL 178
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
QGKAS + AAAL PK GW V+D C+APGNKT HLAAL+ +G++ A + + +R++RL
Sbjct: 179 QGKASCLPAAALGPKRGWDVVDCCAAPGNKTTHLAALVGDRGRVRAFDADGKRLKRLARN 238
Query: 182 IKLSGAANI-EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+ +GA I + DFL +DP DP Y+ VRA+LLDPSCSGSGTA R D+L+ + A G
Sbjct: 239 VSTAGAGAIVDAKRADFLEVDPLDPEYAGVRAVLLDPSCSGSGTAGTRGDYLIAA-ARGE 297
Query: 241 TADPTEM------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP 294
DPT +R++ L+ FQ +AL HA FP ER+ YSTCS+H+ ENE V+++ LP
Sbjct: 298 KDDPTRGHHLRPDKRVDALAQFQLRALLHAFEFPAAERLSYSTCSVHEAENEAVVRAALP 357
Query: 295 IAMSFGFQLATPFP-------NGTAEASQFL 318
A G++L P +G E ++ L
Sbjct: 358 RAAELGWRLCAAMPEWPRRGLDGAVEGAECL 388
>gi|260823572|ref|XP_002604257.1| hypothetical protein BRAFLDRAFT_211078 [Branchiostoma floridae]
gi|229289582|gb|EEN60268.1| hypothetical protein BRAFLDRAFT_211078 [Branchiostoma floridae]
Length = 419
Score = 227 bits (578), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 130/290 (44%), Positives = 172/290 (59%), Gaps = 26/290 (8%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G + + +K A+ AL +L VR+KV EDL+ V PRYVRVNTLK+ V+ A
Sbjct: 87 GKYREAMNRNKTALHSALVRLKVRSKVSRNEDLLPDTVKSQVSLPRYVRVNTLKISVEEA 146
Query: 81 VLELGK-----------------QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
+ +L K QFV +D +P LL+ PP H + L +G + LQ
Sbjct: 147 IEKLKKAGFSLADKPSVEDLETGQFV--QDPHIPALLVFPPETGFHDNQLYKSGEIILQD 204
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
KAS + A LAP PG V+DAC+APGNKT H+A+LM+ GKI A +++ +R+ ++ +
Sbjct: 205 KASCIPAQVLAPPPGACVIDACAAPGNKTSHMASLMQNNGKIFAFDIDAKRLATMRSLTQ 264
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
+G + +++HG FL DP DP YS V ILLDPSCSGSG A RLDHL S T
Sbjct: 265 RAGVSCAQLVHGSFLECDPGDPRYSGVEYILLDPSCSGSGI-ANRLDHLTDEEGSIST-- 321
Query: 244 PTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL L+ FQ ALRHALSFP RV YSTCS+H+ ENEDV+++ L
Sbjct: 322 ----ERLESLAQFQLSALRHALSFPAARRVAYSTCSVHRQENEDVVQAAL 367
>gi|302841478|ref|XP_002952284.1| hypothetical protein VOLCADRAFT_62249 [Volvox carteri f.
nagariensis]
gi|300262549|gb|EFJ46755.1| hypothetical protein VOLCADRAFT_62249 [Volvox carteri f.
nagariensis]
Length = 272
Score = 218 bits (556), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 111/206 (53%), Positives = 139/206 (67%), Gaps = 8/206 (3%)
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
G DLH HPL+ G V LQ KAS M A ALAP+PGW V+D C+APGNKT HLAA+MK +G+
Sbjct: 11 GTDLHDHPLVTRGSVVLQSKASCMPARALAPEPGWTVVDCCAAPGNKTTHLAAIMKNQGR 70
Query: 165 IVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
++A + + R+ RLK L GA + +E DFL+LDP P + EVR +LLDPSCSGSG
Sbjct: 71 VLAFDKDPRRLARLKANASLVGATSCVEARLADFLSLDPTAPEFKEVRGVLLDPSCSGSG 130
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
T R+DHLLPSH +G A R+ +L+ FQ AL HAL FP +ER+VYSTCS+H
Sbjct: 131 TTFTRMDHLLPSH-TGPAA------RVAQLARFQSAALSHALRFPSLERLVYSTCSVHVE 183
Query: 284 ENEDVIKSVLPIAMSFGFQLATPFPN 309
ENE V+ L A G +LA PFP+
Sbjct: 184 ENEAVVAGALQQAAEAGLELADPFPS 209
>gi|149436867|ref|XP_001514526.1| PREDICTED: putative methyltransferase NSUN5-like, partial
[Ornithorhynchus anatinus]
Length = 433
Score = 218 bits (554), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 138/307 (44%), Positives = 177/307 (57%), Gaps = 38/307 (12%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLM--ALYQTPDVPKPRYVRVNTLKMDVDSAV--- 81
L H+ +Q LA+L VR +V EDL+ A P PRYVRVNTLK AV
Sbjct: 63 LARHRARLQAELARLKVRRRVSRNEDLLEPASGARPASKVPRYVRVNTLKTCPGDAVDYF 122
Query: 82 -------------------LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
LE GK+F + D L+P+LL+ P G DLH +P G + LQ
Sbjct: 123 KRQGFSYQGRASSPEELQALE-GKRFFL--DPLLPELLVFPAGTDLHENPFYRAGHLILQ 179
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
KAS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A +L+ R+ + +
Sbjct: 180 DKASCLPATLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAGRLASMATLL 239
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ + DFL++ P DP Y V+ ILLDPSCSGSG + RL+ A
Sbjct: 240 TRAGVSCCELANEDFLSVPPTDPRYGRVQYILLDPSCSGSGMVSRRLEE--------PEA 291
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG-F 301
D ERL L+AFQ KALRHALSFP ++R+VYSTCS+ Q ENEDV+ + L S G F
Sbjct: 292 DGPSPERLRALAAFQLKALRHALSFPALQRLVYSTCSVCQEENEDVVWAAL--QQSAGTF 349
Query: 302 QLATPFP 308
+LA P
Sbjct: 350 RLAEALP 356
>gi|363741020|ref|XP_415710.3| PREDICTED: putative methyltransferase NSUN5 [Gallus gallus]
Length = 465
Score = 217 bits (553), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 132/305 (43%), Positives = 178/305 (58%), Gaps = 39/305 (12%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT--PDVPK-PRYVRVNTLKMDVD-------- 78
H+ ++ LA+L VR V EDL+ L P+ P+ PRYVRVN LK VD
Sbjct: 97 HRARLEAELARLKVRRGVSRNEDLLELASGAGPEAPQVPRYVRVNVLKTSVDDVVEFFKR 156
Query: 79 ---------SAVLEL----GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
++V EL GK+F++ D +P+LL+ PP D H L +G + LQ KA
Sbjct: 157 HGYSFLGRANSVEELKTLSGKKFML--DLHLPELLVFPPQTDFHDSRLYTSGHIILQDKA 214
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S + A L+P G V+DAC+APGNKT HLAA++K KG I A +++ +R+ + + +
Sbjct: 215 SCLPAFLLSPSAGSHVIDACAAPGNKTSHLAAILKNKGHIFAFDVDTKRLATMNTMLMRA 274
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER-LDHLLPSHASGHTADP 244
G + ++ DFL +DP DP YS+V+ ILLDPSCSGSG A LD PS
Sbjct: 275 GVTSFKLAQQDFLTVDPHDPKYSKVKYILLDPSCSGSGMVARLPLDEAAPS--------- 325
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
ERL LS FQ++ L HAL FP V+R+VYSTCS+HQ ENEDV+ +VL S F+LA
Sbjct: 326 --AERLQALSGFQRRILSHALRFPAVQRLVYSTCSVHQEENEDVVHAVLQEQGS-AFRLA 382
Query: 305 TPFPN 309
FP+
Sbjct: 383 NVFPS 387
>gi|126314516|ref|XP_001379130.1| PREDICTED: putative methyltransferase NSUN5 [Monodelphis domestica]
Length = 456
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 178/292 (60%), Gaps = 37/292 (12%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK----PRYVRVNTLKMDVD---- 78
L HK +Q A+L V+ V EDL L +P + PR+VRVNTLK +D
Sbjct: 94 LSRHKARLQAEFARLKVKRCVSRNEDL--LESSPGTAQVIQLPRFVRVNTLKTCLDDTID 151
Query: 79 -------------SAVLEL----GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
S + EL GK+F + D L+P+LL+ P G DLH HPL G + L
Sbjct: 152 YFKREGYSYQGCASGLDELRALEGKRFFL--DPLLPELLVFPSGTDLHKHPLYQAGHLIL 209
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q KAS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A +L+ R+ +
Sbjct: 210 QDKASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAGRLAAMATL 269
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
+ +G + E+ + DFL++ P +P YS V+ ILLDPSCSGSG + +L+ P S
Sbjct: 270 LTRAGVSCCEIANEDFLSISPSNPRYSRVQYILLDPSCSGSGMVSRQLEE--PGAVS--- 324
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P++ ERL+ L+ FQ++ALRHALSFP ++R+VYSTCS+ Q ENEDV++ +L
Sbjct: 325 --PSQ-ERLHALAGFQRRALRHALSFPALQRLVYSTCSVCQEENEDVVQDIL 373
>gi|308801991|ref|XP_003078309.1| tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2)
(ISS) [Ostreococcus tauri]
gi|116056760|emb|CAL53049.1| tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2)
(ISS) [Ostreococcus tauri]
Length = 533
Score = 217 bits (552), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 126/303 (41%), Positives = 178/303 (58%), Gaps = 13/303 (4%)
Query: 18 WPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALY----QTPDVPKPRYVRVNTL 73
W G+ ++ A++ AL + + V S + L L + V R RVNTL
Sbjct: 132 WEGGEGCAIARENEEAMREALKREMTLRGVSSAKALSELVVEASEGASVRYSRTARVNTL 191
Query: 74 KMDVDSAVLEL--GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAA 131
KM V A LE+ G F D L+ LL+ P G DLH H L+ +G V LQG+AS + AA
Sbjct: 192 KMTVKDA-LEVFRGDGFECDVDALIDTLLVFPAGTDLHAHRLVKSGGVVLQGRASCLPAA 250
Query: 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANI 190
ALAP+ GW +D C+APGNKT LAA++ +G + A + + +R++RLK+ +G+ A I
Sbjct: 251 ALAPERGWACIDGCAAPGNKTTQLAAMVGREGGVYAFDADAKRLKRLKENATTTGSHAII 310
Query: 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL-----PSHASGHTADPT 245
DFL +DP + Y+ VRA+LLDPSCSGSGT R D +L + + D
Sbjct: 311 RAKCQDFLTVDPANQQYASVRALLLDPSCSGSGTEVNRGDIMLREALCDDNDDENEVDAA 370
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
+ +R+ KL+AFQKKAL HA +FP V+RV YSTCS+++ ENE+V++ V+ A GF+L
Sbjct: 371 DHDRVEKLAAFQKKALTHAFNFPEVQRVSYSTCSVYEKENEEVVRDVMGAANERGFKLVH 430
Query: 306 PFP 308
P
Sbjct: 431 ALP 433
>gi|145344415|ref|XP_001416728.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576954|gb|ABO95021.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 296
Score = 217 bits (552), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 118/254 (46%), Positives = 156/254 (61%), Gaps = 14/254 (5%)
Query: 66 RYVRVNTLKMDVDSAV---LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
R RVNTLK VD A+ E G + V D L+ LL+ P G DLH H L+ G V LQ
Sbjct: 6 RTARVNTLKTTVDEAMEAFREDGYECAV--DSLIDTLLVFPAGTDLHAHKLVKTGAVVLQ 63
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
G+AS + A ALAP+ GW +D C+APGNKT LAAL+ +G + A + + R++RLK+
Sbjct: 64 GRASCLPAVALAPERGWACIDGCAAPGNKTTQLAALVGREGGVYAFDADARRLKRLKENA 123
Query: 183 KLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS------ 235
+G+ I DFL +DP + Y+ VRA+LLDPSCSGSGT R D +L
Sbjct: 124 ATTGSQGIIRAKCQDFLTVDPGNTVYASVRALLLDPSCSGSGTEVNRGDIMLRDALDEDD 183
Query: 236 -HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP 294
AD E ER++KL+AFQK L+HA FP VERV YSTCS+H+ ENE+V++ V+
Sbjct: 184 VEEIDAEADADE-ERVDKLAAFQKSVLKHAFCFPEVERVSYSTCSVHEKENEEVVRDVMD 242
Query: 295 IAMSFGFQLATPFP 308
+A+ GF+LA P
Sbjct: 243 VAVEHGFKLAHALP 256
>gi|303272885|ref|XP_003055804.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463778|gb|EEH61056.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 616
Score = 213 bits (543), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 124/291 (42%), Positives = 166/291 (57%), Gaps = 38/291 (13%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK------QFVVQKDDLVPDLLILPPG 105
DL+A T R+ RVN LK+ V A+ L + F D VP+L++ PPG
Sbjct: 212 DLVASVST----HSRHARVNVLKISVADAMKRLSRLSPALGAFEYHADPHVPNLVVAPPG 267
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNK-------------- 151
DLH H ++ G + LQGK+S A AL + GW V+DAC+APGNK
Sbjct: 268 TDLHAHAMVKRGELILQGKSSCFPAVALGARAGWHVVDACAAPGNKVRSIHWFPYDRVGE 327
Query: 152 TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH-GDFLNLDPKDPAYSEV 210
T H+AA++ G++ A + ++ R+RRLK + +GA I V DFL++D DP Y+EV
Sbjct: 328 TTHVAAVVGAGGRVFAFDADRARLRRLKANVASAGAGEIVVARCEDFLSVDVNDPEYAEV 387
Query: 211 RAILLDPSCSGSGTAAERLDHLLPSH------------ASGHTADPTEME-RLNKLSAFQ 257
RA+LLDPSCSGSGT+ R D+LL + A G AD + R+ L+AFQ
Sbjct: 388 RAVLLDPSCSGSGTSGTRGDYLLAAARGDVVGGSGADVAGGSGADVAPPDARVAALAAFQ 447
Query: 258 KKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
KAL HALSFP ERV YSTCS+H +ENE V+K+V P A+ G+ L P
Sbjct: 448 TKALLHALSFPSAERVSYSTCSVHALENERVVKTVAPRALELGYTLEKALP 498
>gi|320167290|gb|EFW44189.1| tRNA and rRNA cytosine-C5-methylase [Capsaspora owczarzaki ATCC
30864]
Length = 546
Score = 208 bits (529), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 121/299 (40%), Positives = 171/299 (57%), Gaps = 33/299 (11%)
Query: 31 KGAIQLALAQLLVRNKVKSIEDLM--ALYQTPDVPKPRYVRVNTLKMD------------ 76
KG + AL ++ +R KVK + DL+ A+ + + PRYVRVNTLKM
Sbjct: 144 KGDLNAALVRMKIRAKVKDVRDLLPAAIREQDAIVIPRYVRVNTLKMSVAAAVQALQQQP 203
Query: 77 ---------VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
D + L G+ F +D+ + DLL+ P G D H H L +G + LQ KAS
Sbjct: 204 GGFALVDRPADISALS-GRSFC--QDEHLKDLLVFPSGTDFHDHKLYTSGVLILQDKASC 260
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
A L+P G V+D C+APGNKT H+AAL+ KG + A +L+ R + +++ ++ GA
Sbjct: 261 FPAHVLSPSIGESVIDGCAAPGNKTSHVAALVGLKGHVHAFDLDPRRFKTMQNAMRKFGA 320
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
+N+E ++G+FL + P DP Y++V AILLDPSCSGSG RLD+L A T+
Sbjct: 321 SNVECMNGNFLEIKPTDPKYAKVSAILLDPSCSGSGI-VNRLDYLAAE------ATETQE 373
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATP 306
+RL LS FQ + + HA++F V +V YSTCSIH+ ENE V+ VL +F A P
Sbjct: 374 QRLTALSDFQFQTVSHAMTFSNVSKVSYSTCSIHEQENEGVVARVLAANPAFEVVHALP 432
>gi|327284099|ref|XP_003226776.1| PREDICTED: putative methyltransferase NSUN5-like [Anolis
carolinensis]
Length = 475
Score = 206 bits (524), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 124/289 (42%), Positives = 157/289 (54%), Gaps = 31/289 (10%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL 84
L+ H+ +Q LA+L VR V EDL+ PRYVRVNT+K D AV
Sbjct: 109 LLKHRARLQAELARLKVRRGVSRDEDLLPPPAGGGGNGTLPRYVRVNTIKTRFDDAVDYF 168
Query: 85 GKQ-FVVQK-------------------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+Q FV Q D +P +LI PPG DLH L G V LQ K
Sbjct: 169 KRQGFVYQGRASPEMKGVASLSGKTFLLDPHLPGVLIFPPGTDLHEDQLYKAGHVILQDK 228
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A L P PG VLDAC+APGNKT HLAA+M KG+I A +L+ +R+ + +
Sbjct: 229 ASCLPAFLLNPTPGSHVLDACAAPGNKTSHLAAIMGNKGRIFAFDLDAKRLATMSTMLAR 288
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + H DFL DP DP YS V ILLDPSCSGSG LP +
Sbjct: 289 AGVTCHNLAHQDFLATDPGDPKYSHVEYILLDPSCSGSGIVGR-----LPYEEE----ER 339
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ +RL L+ FQ++ L HAL FP + R+VYSTCS+HQ ENE+V++ VL
Sbjct: 340 MDAQRLQALAGFQRRMLGHALKFPALRRLVYSTCSLHQEENEEVVRDVL 388
>gi|390459010|ref|XP_002743979.2| PREDICTED: putative methyltransferase NSUN5 isoform 1 [Callithrix
jacchus]
Length = 466
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 122/291 (41%), Positives = 166/291 (57%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK+F++ D +VP+LL P DLH HPL G + LQ
Sbjct: 154 FKRKGFSYQGRASSADDLRALKGKRFLL--DPVVPELLAFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLSSMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP YS+VR ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGVSCCELAEDDFLAVSPSDPRYSQVRYILLDPSCSGSGMQSRQLE-----EPGARTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P ERL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SP---ERLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRGAL 374
>gi|307106730|gb|EFN54975.1| hypothetical protein CHLNCDRAFT_24352 [Chlorella variabilis]
Length = 491
Score = 204 bits (520), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 126/296 (42%), Positives = 162/296 (54%), Gaps = 34/296 (11%)
Query: 17 LWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMD 76
L P G AE+ ++ K + AL QLL V+S +L+ R RVNT+KM
Sbjct: 162 LRPTGPAERAVLKRKADLADALQQLLDAAGVQSAAELLPHPGPHTPHP-RTARVNTIKMS 220
Query: 77 VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPK 136
V A+ D L PP P N KAS M A ALAP+
Sbjct: 221 VQEAL----------------DWLRAPP-------PEHRN-------KASCMPAHALAPQ 250
Query: 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGD 196
PGW ++DAC+APGNKT HLAALM +G IVA E + +R+ RL+ + +G I D
Sbjct: 251 PGWALVDACAAPGNKTTHLAALMANRGSIVAFEKDPKRLERLRAIVAATGGTIISPQLAD 310
Query: 197 FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA---SGHTADPTEMERLNKL 253
FL +DP+ P Y V+A+LLDPSCSGSGTA R+D+LLPS A G A +R+ L
Sbjct: 311 FLAVDPEAPQYRHVQAVLLDPSCSGSGTAFSRMDYLLPSSADRLKGGRAGWLPDKRVEAL 370
Query: 254 SAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
+ FQ + HAL FP + R+VYSTCS+H ENE V+ +VL A GF+L PFP
Sbjct: 371 AQFQAACILHALRFPALHRLVYSTCSVHARENEGVVAAVLEEAAQRGFRLEAPFPG 426
>gi|351705362|gb|EHB08281.1| Putative methyltransferase NSUN5 [Heterocephalus glaber]
Length = 496
Score = 204 bits (519), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 128/303 (42%), Positives = 173/303 (57%), Gaps = 34/303 (11%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT--PDVPKPRYVRVNTLKMDVDSAV------ 81
H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D AV
Sbjct: 132 HQARLKAELARLKVHRGVSRNEDLLEVGSRLGPASQVPRFVRVNTLKTCPDDAVDYFKRK 191
Query: 82 ----------LE-----LGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
LE GK F + D L+P+LL+ P DLH HPL G + LQ KAS
Sbjct: 192 GFSYQGRASSLEDLRALKGKHFFL--DPLLPELLVFPAQTDLHEHPLYQAGHLILQDKAS 249
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A LAP PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G
Sbjct: 250 CLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG 309
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ E+ DFL + P D Y+ V+ ILLDPSCSGSG + +L+ A+
Sbjct: 310 VSCCELAEEDFLAVSPSDTRYARVQYILLDPSCSGSGMLSRQLEE--------PGAELPS 361
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATP 306
ERL L+AFQ +AL HAL+FP V+R+VYSTCS+ Q ENEDV++ L ++ F+LA
Sbjct: 362 KERLCALAAFQLRALCHALTFPAVQRLVYSTCSLSQEENEDVVREALQQSLG-AFRLAPV 420
Query: 307 FPN 309
P+
Sbjct: 421 LPS 423
>gi|224075639|ref|XP_002188018.1| PREDICTED: putative methyltransferase NSUN5 [Taeniopygia guttata]
Length = 431
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 124/302 (41%), Positives = 173/302 (57%), Gaps = 33/302 (10%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK---PRYVRVNTLKMDVDSAV----- 81
H+ ++ LA++ VR+KV EDL+A Q PRYVRVNTLK VD +
Sbjct: 97 HRARLEAELARMKVRHKVSRNEDLLASEQAVSAAASQVPRYVRVNTLKTCVDDVIDFFKC 156
Query: 82 ---LELGKQFVVQKDDLVPD-----------LLILPPGCDLHVHPLIVNGCVFLQGKASS 127
LGK V++ + LL+ P DLH + L +G + LQ KAS
Sbjct: 157 QGYAYLGKANSVEELKALSGKKFLLDLHLPELLVFPSQTDLHDNLLYTSGHIILQDKASC 216
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+ A L P G V+DAC+APGNKT HLAA++K KG+I A +++ +RV + +G
Sbjct: 217 LPAFLLGPVAGSHVIDACAAPGNKTSHLAAILKNKGQIFAFDVDPKRVATTNTLLTRAGV 276
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
+++ DFL +DP+DP YS V ILLDPSCSGSG + + G P+
Sbjct: 277 TGCQLVQQDFLTVDPRDPKYSRVTHILLDPSCSGSG---------MVTRGPGEEVAPS-A 326
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF 307
ERL L+ FQ++AL HALSFP ++R+VYSTCS+H+ ENE+V+++VL S F+L T F
Sbjct: 327 ERLRALAGFQRRALSHALSFPALQRLVYSTCSLHREENEEVVQAVLQEWGS-AFRLVTAF 385
Query: 308 PN 309
P+
Sbjct: 386 PS 387
>gi|443724094|gb|ELU12257.1| hypothetical protein CAPTEDRAFT_114718, partial [Capitella teleta]
Length = 423
Score = 202 bits (513), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 115/285 (40%), Positives = 160/285 (56%), Gaps = 29/285 (10%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV 89
HK A+ LA++ ++ K K+ L++ +V PRYVRVNTLK+ V + ++
Sbjct: 99 HKAALTAELARMKIQAKAKNNSGLLSDSGASEVTIPRYVRVNTLKVSVKEVIGYFAREDF 158
Query: 90 VQ---------------------KDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
Q +D +P+LL+ G DLH H G + LQ KAS +
Sbjct: 159 TQVTTSSARFMETVSSLKPRHFFQDPHIPELLVFAAGTDLHDHTYYKTGLIILQDKASCI 218
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
A AL P PG V+D C+APGNKT HLAA+M+ +G+++A + + +R + I +GA+
Sbjct: 219 PAFALQPPPGSHVVDCCAAPGNKTTHLAAIMQNQGRVIAFDRDMKRFSTMNTLIIRAGAS 278
Query: 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
I DFL +DP A+ +VR +L+DPSCSGSG E LD + S E
Sbjct: 279 CIRSELKDFLKVDPN--AHKDVRYLLVDPSCSGSGDFCE-LDDFIESEGGKQ-----EKS 330
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL KLS FQ + L+HAL+FP ERVVYSTCSIH+ ENE V++ VL
Sbjct: 331 RLEKLSNFQAQILKHALAFPNAERVVYSTCSIHEQENESVVRDVL 375
>gi|355747584|gb|EHH52081.1| hypothetical protein EGM_12451 [Macaca fascicularis]
Length = 470
Score = 201 bits (511), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 121/291 (41%), Positives = 164/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTP--DVPKPRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P D PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPDSQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGISCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPA---RLHALAGFQQRALCHALTFPSLKRLVYSTCSLCQEENEDVVRDAL 374
>gi|332867777|ref|XP_519138.3| PREDICTED: putative methyltransferase NSUN5 [Pan troglodytes]
Length = 470
Score = 201 bits (510), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DSLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGVSCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPV---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 374
>gi|426356600|ref|XP_004045648.1| PREDICTED: putative methyltransferase NSUN5-like [Gorilla gorilla
gorilla]
Length = 466
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLQVGSRPGPASQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DSLMPELLVFPTQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGVSCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPV---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 374
>gi|410255004|gb|JAA15469.1| NOP2/Sun domain family, member 5 [Pan troglodytes]
gi|410255006|gb|JAA15470.1| NOP2/Sun domain family, member 5 [Pan troglodytes]
gi|410339407|gb|JAA38650.1| NOP2/Sun domain family, member 5 [Pan troglodytes]
gi|410339409|gb|JAA38651.1| NOP2/Sun domain family, member 5 [Pan troglodytes]
Length = 466
Score = 200 bits (509), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DSLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGVSCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPV---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 374
>gi|270288816|ref|NP_001161819.1| putative methyltransferase NSUN5 isoform 3 [Homo sapiens]
gi|194389950|dbj|BAG60491.1| unnamed protein product [Homo sapiens]
Length = 470
Score = 200 bits (508), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPV---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 374
>gi|403286054|ref|XP_003934322.1| PREDICTED: putative methyltransferase NSUN5 [Saimiri boliviensis
boliviensis]
Length = 380
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 114/250 (45%), Positives = 155/250 (62%), Gaps = 31/250 (12%)
Query: 65 PRYVRVNTLKMDVD-----------------SAVLEL----GKQFVVQKDDLVPDLLILP 103
PR+VRVNTLK D S+V +L GK+F++ D LVP+LL+ P
Sbjct: 49 PRFVRVNTLKTCSDDVVDYFKRKGFSYQGRASSVDDLRALKGKRFLL--DPLVPELLVFP 106
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
DLH HPL G + LQ +AS + A L P PG V+DAC+APGNKT HLAAL+K +G
Sbjct: 107 TQTDLHEHPLYQAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQG 166
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
KI A +L+ +R+ + + +G + E+ DFL + P DP YS+VR ILLDPSCSGSG
Sbjct: 167 KIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYSQVRYILLDPSCSGSG 226
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
+ +L+ P + H A RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q
Sbjct: 227 MPSRQLEE--PGACTPHPA------RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQE 278
Query: 284 ENEDVIKSVL 293
ENEDV++ L
Sbjct: 279 ENEDVVRDAL 288
>gi|23199998|ref|NP_683759.1| putative methyltransferase NSUN5 isoform 1 [Homo sapiens]
gi|21552754|gb|AAM62310.1|AF412028_1 Williams-Beuren syndrome critical region protein 20 copy A [Homo
sapiens]
gi|14165561|gb|AAH08084.1| NOL1/NOP2/Sun domain family, member 5 [Homo sapiens]
gi|37674386|gb|AAQ96839.1| unknown [Homo sapiens]
gi|119590101|gb|EAW69695.1| hCG39703, isoform CRA_d [Homo sapiens]
gi|123990710|gb|ABM83920.1| NOL1/NOP2/Sun domain family, member 5 [synthetic construct]
gi|123999331|gb|ABM87241.1| NOL1/NOP2/Sun domain family, member 5 [synthetic construct]
gi|307684594|dbj|BAJ20337.1| NOP2/Sun domain family, member 5 [synthetic construct]
Length = 466
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPV---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 374
>gi|8922322|ref|NP_060514.1| putative methyltransferase NSUN5 isoform 2 [Homo sapiens]
gi|118573085|sp|Q96P11.2|NSUN5_HUMAN RecName: Full=Putative methyltransferase NSUN5; AltName:
Full=NOL1-related protein; Short=NOL1R; AltName:
Full=NOL1/NOP2/Sun domain family member 5; AltName:
Full=Williams-Beuren syndrome chromosomal region 20A
protein
gi|7022196|dbj|BAA91515.1| unnamed protein product [Homo sapiens]
gi|37674385|gb|AAQ96838.1| unknown [Homo sapiens]
gi|119590098|gb|EAW69692.1| hCG39703, isoform CRA_a [Homo sapiens]
Length = 429
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 162/287 (56%), Gaps = 33/287 (11%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL--- 84
H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 98 HQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQ 157
Query: 85 ------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS
Sbjct: 158 GFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRAS 215
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G
Sbjct: 216 CLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG 275
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T P
Sbjct: 276 VSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPV- 329
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 330 --RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 374
>gi|355560554|gb|EHH17240.1| hypothetical protein EGK_13590, partial [Macaca mulatta]
Length = 399
Score = 199 bits (506), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 23 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPVSQLPRFVRVNTLKTCSDDVVDY 82
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 83 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 140
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 141 DRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 200
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 201 ARAGISCCELAEEDFLAVSPSDPCYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 255
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 256 SPA---RLHALAGFQQRALCHALTFPSLKRLVYSTCSLCQEENEDVVRDAL 303
>gi|198426740|ref|XP_002131278.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 418
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 119/304 (39%), Positives = 164/304 (53%), Gaps = 30/304 (9%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMD---- 76
G +K + K AI A A++ ++ KV EDL+ + + P+Y+RVNTL
Sbjct: 88 GKFKKLIKTRKSAINAAFARIKLKKKVSKTEDLV---EKSNFTLPKYLRVNTLLTTTTKV 144
Query: 77 -----------VDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
VD +V E+ KQF D +P+LL+ D H H L G + Q K
Sbjct: 145 METLNKDGFTRVDCSVNEIVEKQFSSDPD--IPNLLVFHFSTDFHDHGLYKLGHLIFQDK 202
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
+S M A L P P V+DAC+APGNKT HL+A+M GK+ A + + ER+ +K +K
Sbjct: 203 SSCMPAFVLNPSPNSHVIDACAAPGNKTSHLSAIMNNTGKLFAIDRSSERIEVMKKQLKK 262
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+ N EV++ DFL L P D + +V IL+DPSC+GSG + +L+H D
Sbjct: 263 ASVKNCEVINSDFLILKPTDEKFKQVEYILVDPSCTGSGIISRQLEH-------TEEKDS 315
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
+RL LS FQ K L HALSFP V+RVVYSTCSIH+ ENE ++K L + + F L
Sbjct: 316 KCSKRLESLSKFQLKVLNHALSFPNVKRVVYSTCSIHEEENELIVK--LAVEQNSNFDLK 373
Query: 305 TPFP 308
P
Sbjct: 374 KVLP 377
>gi|301608151|ref|XP_002933655.1| PREDICTED: putative methyltransferase NSUN5-like [Xenopus
(Silurana) tropicalis]
Length = 492
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/299 (40%), Positives = 169/299 (56%), Gaps = 35/299 (11%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVD 78
G + ++ HK ++ LA+L V+ KV S EDL+ V PRYVRVN +K ++
Sbjct: 88 GRWKAVILGHKARLRAELARLKVKKKVSSNEDLVTSLGGGAVGPALPRYVRVNPIKTCLN 147
Query: 79 SAVLEL------------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLI 114
+ GK+F+ +D VPDLL PPG DLH L
Sbjct: 148 DVIAYFKRRGYTYLGKARSIEELAELGQKSGKRFL--QDLHVPDLLAFPPGTDLHKDSLY 205
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
G + LQ KAS + A LAP G V+DAC+APGNKT LAA+++ KGK+ A +L+ +R
Sbjct: 206 TAGHLILQDKASCLPALLLAPPVGSCVIDACAAPGNKTSQLAAMLQNKGKLFAFDLDTKR 265
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
+ + + +G E+ + DFL + P+DP Y +V IL+DPSCSGSG +++ L
Sbjct: 266 LATMSTLLLRAGVTCQELANQDFLTVSPEDPKYQKVSHILVDPSCSGSGI-PDQMRILAD 324
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
S + ERL LS FQ++AL HALSFP V+RVVYSTCSIHQ ENE+V++ +L
Sbjct: 325 KEESAQS------ERLEALSGFQRRALSHALSFPSVQRVVYSTCSIHQQENEEVVRDIL 377
>gi|402863192|ref|XP_003895915.1| PREDICTED: putative methyltransferase NSUN5 [Papio anubis]
Length = 470
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPVSQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGISCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPA---RLHALAGFQQRALCHALTFPSLKRLVYSTCSLCQEENEDVVRDAL 374
>gi|47220465|emb|CAG03245.1| unnamed protein product [Tetraodon nigroviridis]
Length = 429
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 135/357 (37%), Positives = 189/357 (52%), Gaps = 51/357 (14%)
Query: 3 EARRIGLHTNLRHPLWPV-------------GDAEKFLML-HKGAIQLALAQLLVRNKVK 48
E+ ++ T L+ PL V G + K ML H+ +Q LA++ V+ KV
Sbjct: 55 ESTKLLKQTKLKMPLAKVLVYDLLMGQGLKCGGSWKAAMLKHRARLQAVLARMKVKQKVS 114
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELG--------------------KQF 88
EDL+ V PRYVRVNTLK VD V L K+F
Sbjct: 115 KNEDLLPKNTKQPVQLPRYVRVNTLKTTVDDVVDYLKRDGLSYLGHASRMEDLTLKEKEF 174
Query: 89 VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAP 148
+ +D +P+LL+ P D H H L +G + LQ KAS + A L P G V+DAC+AP
Sbjct: 175 L--RDMHLPELLVFSPRTDFHEHFLYKSGHIILQDKASCLPAYLLDPPAGSHVIDACAAP 232
Query: 149 GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS 208
GNK+ HLAA+MK KG++ A +L+ +R+ + + +G ++ + DFL +DPK+P Y
Sbjct: 233 GNKSSHLAAIMKNKGRLFAFDLDAKRLTTMSTLLLRAGITCQQLANQDFLKVDPKNPQYK 292
Query: 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME-RLNKLSAFQKKALRHALSF 267
+V +LLDPSCSGSG A LP S D E+ RL L++FQ + L H LSF
Sbjct: 293 DVEYMLLDPSCSGSGMAC------LPHEES--CDDQEEVRARLASLASFQLRCLNHGLSF 344
Query: 268 PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN----GTAEASQFLKA 320
P ++R+VYSTCSIH ENE V+ + L + GF+L + P G +Q L+A
Sbjct: 345 PRLKRLVYSTCSIHSQENEQVVAACL--QQNPGFRLVSLLPQWPERGQEPLTQCLRA 399
>gi|16226071|gb|AAL16067.1|AF420249_1 NOL1R [Homo sapiens]
Length = 429
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 162/287 (56%), Gaps = 33/287 (11%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL--- 84
H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 98 HQPRLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQ 157
Query: 85 ------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS
Sbjct: 158 GFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRAS 215
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G
Sbjct: 216 CLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG 275
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T P
Sbjct: 276 VSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPV- 329
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 330 --RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 374
>gi|380795877|gb|AFE69814.1| putative methyltransferase NSUN5 isoform 1, partial [Macaca
mulatta]
Length = 451
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 79 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPVSQLPRFVRVNTLKTCSDDVVDY 138
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 139 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 196
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 197 DRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 256
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 257 ARAGISCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 311
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 312 SPA---RLHALAGFQQRALCHALTFPSLKRLVYSTCSLCQEENEDVVRDAL 359
>gi|383419865|gb|AFH33146.1| putative methyltransferase NSUN5 isoform 1 [Macaca mulatta]
gi|384948132|gb|AFI37671.1| putative methyltransferase NSUN5 isoform 1 [Macaca mulatta]
Length = 466
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 120/291 (41%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPVSQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGISCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPA---RLHALAGFQQRALCHALTFPSLKRLVYSTCSLCQEENEDVVRDAL 374
>gi|380796409|gb|AFE70080.1| putative methyltransferase NSUN5 isoform 3, partial [Macaca
mulatta]
Length = 414
Score = 198 bits (503), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 162/287 (56%), Gaps = 33/287 (11%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL--- 84
H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 83 HQARLKAELARLKVHRGVSRNEDLLEVGSRPGPVSQLPRFVRVNTLKTCSDDVVDYFKRQ 142
Query: 85 ------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS
Sbjct: 143 GFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRAS 200
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G
Sbjct: 201 CLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG 260
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T P
Sbjct: 261 ISCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPA- 314
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 315 --RLHALAGFQQRALCHALTFPSLKRLVYSTCSLCQEENEDVVRDAL 359
>gi|383419863|gb|AFH33145.1| putative methyltransferase NSUN5 isoform 3 [Macaca mulatta]
gi|384948130|gb|AFI37670.1| putative methyltransferase NSUN5 isoform 3 [Macaca mulatta]
Length = 429
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/287 (41%), Positives = 162/287 (56%), Gaps = 33/287 (11%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL--- 84
H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 98 HQARLKAELARLKVHRGVSRNEDLLEVGSRPGPVSQLPRFVRVNTLKTCSDDVVDYFKRQ 157
Query: 85 ------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS
Sbjct: 158 GFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRAS 215
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G
Sbjct: 216 CLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG 275
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T P
Sbjct: 276 ISCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPA- 329
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 330 --RLHALAGFQQRALCHALTFPSLKRLVYSTCSLCQEENEDVVRDAL 374
>gi|297288127|ref|XP_001110343.2| PREDICTED: putative methyltransferase NSUN5-like isoform 1 [Macaca
mulatta]
Length = 470
Score = 198 bits (503), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 163/291 (56%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPVSQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLNPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 272 ARAGISCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R++YSTCS+ Q ENEDV++ L
Sbjct: 327 SPA---RLHALAGFQQRALCHALTFPSLKRLIYSTCSLCQEENEDVVRDAL 374
>gi|297680257|ref|XP_002817918.1| PREDICTED: putative methyltransferase NSUN5, partial [Pongo abelii]
Length = 377
Score = 197 bits (501), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 118/287 (41%), Positives = 162/287 (56%), Gaps = 33/287 (11%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL--- 84
H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 98 HQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQ 157
Query: 85 ------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS
Sbjct: 158 GFSYQGRASSLDDFRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRAS 215
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G
Sbjct: 216 CLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAG 275
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T P
Sbjct: 276 VSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPA- 329
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ + ENEDV++ L
Sbjct: 330 --RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCREENEDVVRDAL 374
>gi|189067497|dbj|BAG37756.1| unnamed protein product [Homo sapiens]
Length = 466
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 162/291 (55%), Gaps = 33/291 (11%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDY 153
Query: 84 L---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
GK F++ D L+P+LL+ P DLH HPL G + LQ
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQ 211
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 212 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 271
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV IL DPSCSGSG + +L+ T
Sbjct: 272 ARAGVSCCELAEEDFLAVSPSDPRYHEVHYILPDPSCSGSGMPSRQLE-----EPGAGTP 326
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 327 SPV---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 374
>gi|390594291|gb|EIN03703.1| S-adenosyl-L-methionine-dependent methyltransferase [Punctularia
strigosozonata HHB-11173 SS5]
Length = 468
Score = 197 bits (501), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 125/304 (41%), Positives = 170/304 (55%), Gaps = 27/304 (8%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK + +L ++ KS DL + + PRYVRVNTL D
Sbjct: 90 GPIKQAVLRHKTRLNGEFTKLKIKRGAKSNADLAQSHDERALRIPRYVRVNTLLWSTD-- 147
Query: 81 VLELGKQFV---------------VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
E K FV ++D VPDLL+ P L L +G + LQ KA
Sbjct: 148 --EAAKAFVSRGYVDIDPFENPKGFKRDAHVPDLLLFNPSARLQDDELYKSGKIILQDKA 205
Query: 126 SSMVAAALAPKPGW--KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
S A LAP +V+DA SAPGNKT HL+ALMKGKGK+ A E +++R LK +
Sbjct: 206 SCFPALVLAPPSSEHARVIDATSAPGNKTSHLSALMKGKGKLHAFERDRKRFSTLKMMLS 265
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
+ N+E ++ DFL++ P+DP Y+ V ILLDPSCSGSG RLDHLL + AD
Sbjct: 266 KASCRNVEPINDDFLSVSPEDPRYAGVTHILLDPSCSGSGI-VNRLDHLLETEED--DAD 322
Query: 244 PTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGF 301
+ ERL KL+AFQ ++HA+ FP +R+VYSTCS+H ENE V++ L A + GF
Sbjct: 323 DRQ-ERLAKLAAFQLSMIKHAMKFPSAKRIVYSTCSMHATENEHVVREALRSEEAANSGF 381
Query: 302 QLAT 305
+LA+
Sbjct: 382 RLAS 385
>gi|47086913|ref|NP_998450.1| NOP2/Sun domain family, member 5 [Danio rerio]
gi|42542704|gb|AAH66371.1| Zgc:77183 [Danio rerio]
Length = 435
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 130/328 (39%), Positives = 179/328 (54%), Gaps = 42/328 (12%)
Query: 21 GDAEKFLML-HKGAIQLALAQLLVRNKVKSIEDLM--ALYQTPDVPKPRYVRVNTLKMDV 77
G A K ML H+ +Q ALA++ ++ KV +DL+ ++ QT + PRYVRVNTLK +
Sbjct: 86 GGAWKTTMLKHRARLQAALARIKIKRKVSRNQDLLPSSIQQTQNDVIPRYVRVNTLKTSL 145
Query: 78 DSAVLEL---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVN 116
+ + L GK F+ D + DLL+ D H H L
Sbjct: 146 EDVIDYLKREGFSYQGTPGRLEDLDRLSGKMFLC--DLHLKDLLVFSGKTDFHDHFLYKA 203
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G + LQGKAS + A L P G V+DAC+APGNKT HLAA+MK KGK+ A +L+ +R+
Sbjct: 204 GHIILQGKASCLPAFLLNPPVGSHVIDACAAPGNKTSHLAAIMKNKGKLFAFDLDAKRLS 263
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
+ + +G ++ + DFL +DP++ Y EV+ ILLDPSCSGSG R D L +
Sbjct: 264 TMSTLLLRAGVTCHKLANQDFLKVDPQNSEYKEVKYILLDPSCSGSGMVCLR-DELPETQ 322
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
G RL L+AFQ L HAL FP +ER+VYSTCSIH ENE+V+ + L
Sbjct: 323 EDG---------RLQALAAFQLHCLYHALQFPQLERIVYSTCSIHSQENEEVVTACL--Q 371
Query: 297 MSFGFQLATPFPN----GTAEASQFLKA 320
+ GF+L P+ G +Q L+A
Sbjct: 372 RNPGFRLVHLLPDWPERGHEPLTQCLRA 399
>gi|213512774|ref|NP_001133271.1| NOP2/Sun domain family, member 5 [Salmo salar]
gi|209148487|gb|ACI32940.1| methyltransferase NSUN5 [Salmo salar]
Length = 524
Score = 196 bits (499), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 166/296 (56%), Gaps = 32/296 (10%)
Query: 21 GDAEKFLML-HKGAIQLALAQLLVRNKVKSIEDLMAL-YQTPDVPK-PRYVRVNTLKMDV 77
G A K LM+ H+ +Q ALA++ ++ KV +DL++ Q P+ + PRYVRVNTLK V
Sbjct: 86 GGAWKALMMKHRSRLQAALARMKIKQKVSRNQDLLSSSLQHPEGDQLPRYVRVNTLKTTV 145
Query: 78 DSAV-------------------LEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNG 117
+ A+ L L GK FV D + DLL+ P D H H L G
Sbjct: 146 EDAIDYFKREGFSYLGQAYRLDDLNLKGKSFV--GDLHLSDLLVFSPKTDFHDHNLYKAG 203
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
+ LQ KAS + A L P G VLDAC+APGNKT HLAA+MK KG++ A +L+ +R+
Sbjct: 204 HIILQDKASCLPAYLLNPPTGSHVLDACAAPGNKTSHLAAIMKNKGRLFAFDLDAKRLST 263
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
+ + +G ++ + DFL +DP P Y +V ILLDPSCSGSG R D PS
Sbjct: 264 MSTLLLRAGVTCQQLANQDFLKVDPDGPQYKDVEYILLDPSCSGSGMVCLR-DEASPSQK 322
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ RL L+AFQ L HAL FP ++R+VYSTCSIH ENE V+ + L
Sbjct: 323 E------QDKRRLQALAAFQLHCLNHALRFPRLQRLVYSTCSIHTEENEQVVAACL 372
>gi|326931128|ref|XP_003211686.1| PREDICTED: e3 ubiquitin-protein ligase TRIM50-like [Meleagris
gallopavo]
Length = 818
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/267 (42%), Positives = 158/267 (59%), Gaps = 36/267 (13%)
Query: 65 PRYVRVNTLKMDVD-----------------SAVLEL----GKQFVVQKDDLVPDLLILP 103
PRYVRVN LK +D S+V EL GK+F++ D +P+LL+ P
Sbjct: 487 PRYVRVNVLKTCMDDVVEFFKRQGYSFLGRASSVEELKILSGKKFLL--DIHLPELLVFP 544
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
P D H + L +G + LQ KAS + A L+P G V+DAC+APGNKT HLAA++K KG
Sbjct: 545 PQTDFHDNRLYTSGHIILQDKASCLPAFLLSPSAGSHVIDACAAPGNKTSHLAAILKNKG 604
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
I A +++ +R+ + + +G + ++ DFL +DP+DP YS+V+ ILLDPSCSGSG
Sbjct: 605 HIFAFDVDTKRLATMNTMLMRAGVTSFKLAQQDFLTVDPQDPKYSKVKYILLDPSCSGSG 664
Query: 224 TAAE-RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQ 282
A L+ PS ERL L+ FQ++ L HAL FP V+R+ YSTCS+H+
Sbjct: 665 MVARLSLEEAAPS-----------AERLQALAGFQRRVLSHALRFPAVQRLAYSTCSVHR 713
Query: 283 VENEDVIKSVLPIAMSFGFQLATPFPN 309
ENEDV+ +VL S F+L FP+
Sbjct: 714 EENEDVVHAVLQEQGS-AFRLVNAFPS 739
>gi|410931303|ref|XP_003979035.1| PREDICTED: putative methyltransferase NSUN5-like [Takifugu
rubripes]
Length = 434
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 134/356 (37%), Positives = 189/356 (53%), Gaps = 47/356 (13%)
Query: 3 EARRIGLHTNLRHPLWPV--------------GDAEKFLMLHKGAIQLALAQLLVRNKVK 48
E+ ++ T LR PL V G + +M H+ +Q LA++ V+ KV
Sbjct: 55 ESTKLLKQTKLRMPLAKVLVYDLLMGQGLKCGGSWKAAIMKHRARLQSVLARMKVKQKVS 114
Query: 49 SIEDLM--ALYQTPDVPKPRYVRVNTLKMDVDSAVLEL---GKQFVVQK---DDL----- 95
EDL+ L Q PRYVRVNT+K VD V L G ++ Q DDL
Sbjct: 115 KNEDLLPKNLKQLVADQLPRYVRVNTVKTTVDDVVDYLKRDGLTYLGQASRIDDLTLKEK 174
Query: 96 -------VPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAP 148
+ +LL+ P D H H L G + LQ KAS + A L P PG V+DAC+AP
Sbjct: 175 EFLRDMHLQELLVFSPKTDFHDHFLYKAGHIILQDKASCLPAYLLNPPPGSHVIDACAAP 234
Query: 149 GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS 208
GNK+ HLAA+MK KG++ A +L+ +R+ + + +G ++ + DFL +DP+DP Y
Sbjct: 235 GNKSSHLAAIMKNKGRLFAFDLDAKRLTTMSTLLLRAGVTCQQLANQDFLKVDPEDPQYK 294
Query: 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 268
+V +LLDPSCSGSG + D S + E RL L++FQ K L H LSFP
Sbjct: 295 DVEYMLLDPSCSGSGMVCLQHDD------SSDNQERVE-ARLASLASFQLKCLNHGLSFP 347
Query: 269 GVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP----NGTAEASQFLKA 320
++R+VYSTCSIH+ ENE+V+ + L + GF+L + P G +Q L+A
Sbjct: 348 RLKRLVYSTCSIHRQENEEVVAACL--KQNPGFRLVSLLPRWPERGLEPLTQCLRA 401
>gi|198285547|gb|ACH85312.1| NOL1/NOP2/Sun domain family member 5-like [Salmo salar]
Length = 488
Score = 196 bits (499), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/296 (42%), Positives = 166/296 (56%), Gaps = 32/296 (10%)
Query: 21 GDAEKFLML-HKGAIQLALAQLLVRNKVKSIEDLMAL-YQTPDVPK-PRYVRVNTLKMDV 77
G A K LM+ H+ +Q ALA++ ++ KV +DL++ Q P+ + PRYVRVNTLK V
Sbjct: 86 GGAWKALMMKHRSRLQAALARMKIKQKVSRNQDLLSSSLQHPEGDQLPRYVRVNTLKTTV 145
Query: 78 DSAV-------------------LEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNG 117
+ A+ L L GK FV D + DLL+ P D H H L G
Sbjct: 146 EDAIDYFKREGFSYLGQAYRLDDLNLKGKSFV--GDLHLSDLLVFSPKTDFHDHNLYKAG 203
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
+ LQ KAS + A L P G VLDAC+APGNKT HLAA+MK KG++ A +L+ +R+
Sbjct: 204 HIILQDKASCLPAYLLNPPTGSHVLDACAAPGNKTSHLAAIMKNKGRLFAFDLDAKRLST 263
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
+ + +G ++ + DFL +DP P Y +V ILLDPSCSGSG R D PS
Sbjct: 264 MSTLLLRAGVTCQQLANQDFLKVDPDGPQYKDVEYILLDPSCSGSGMVCLR-DEASPSQK 322
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ RL L+AFQ L HAL FP ++R+VYSTCSIH ENE V+ + L
Sbjct: 323 E------QDKRRLQALAAFQLHCLNHALRFPRLQRLVYSTCSIHTEENEQVVAACL 372
>gi|426255336|ref|XP_004021307.1| PREDICTED: putative methyltransferase NSUN5 [Ovis aries]
Length = 501
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 125/305 (40%), Positives = 173/305 (56%), Gaps = 30/305 (9%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L VR V EDL+ + P PR+VRVNTLK + A+
Sbjct: 82 LLERHQARLKAELARLKVRQGVSRNEDLLEVGSKPGSASQVPRFVRVNTLKTCAEDAIDY 141
Query: 84 LGKQ-FVVQK-----DDL-------------VPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q DD+ +P+LL+ P DLH HPL G + LQ K
Sbjct: 142 FKRQGFSYQGRASGLDDIRALKGKCFLLDPLLPELLVFPAQTDLHDHPLYQAGHLILQDK 201
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A + + +R+ + + L
Sbjct: 202 ASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDQDAKRLASMATLLAL 261
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D Y +V+ ILLDPSCSGSG + +L+ A
Sbjct: 262 AGVSCCELAEQDFLTVSPSDQRYCQVQYILLDPSCSGSGMPSRQLEE--------PKAGM 313
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
ERL L+AFQ++AL HAL+FP + R+VYSTCS+ Q ENEDV+ + L ++ F+LA
Sbjct: 314 PSPERLRALAAFQQRALSHALTFPALRRLVYSTCSVCQEENEDVVHAALQQSLG-AFRLA 372
Query: 305 TPFPN 309
P+
Sbjct: 373 AVLPS 377
>gi|426199289|gb|EKV49214.1| hypothetical protein AGABI2DRAFT_65508 [Agaricus bisporus var.
bisporus H97]
Length = 433
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 151/255 (59%), Gaps = 19/255 (7%)
Query: 65 PRYVRVNTLKMDVDSAV-------LELGKQFVVQ----KDDLVPDLLILPPGCDLHVHPL 113
PRYVRVNT D A+ +G F KD+ +PDL + P
Sbjct: 152 PRYVRVNTKFWTSDEAIAYFIKKGFSIGDPFQTSTSFAKDEHIPDLFLFAPQTSFQDDTA 211
Query: 114 IVNGCVFLQGKASSMVAAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELN 171
+G V LQ KAS A L+P K V+DA +APGNKT HL+A+MKGKGKI+A E +
Sbjct: 212 YTSGKVILQDKASCFPAFVLSPPANDKCLVIDATAAPGNKTSHLSAIMKGKGKILAFERD 271
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
++R LK + +G AN+ L+ DFL++DP D Y+ V ILLDPSCSGSG RLDH
Sbjct: 272 RKRFHTLKSMLSKAGCANVLPLNTDFLSIDPSDTTYASVTHILLDPSCSGSGI-VNRLDH 330
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKS 291
LL + + D + +RLNKL+AFQ + + HA+ FP V+++VYSTCS+H +ENE V+ S
Sbjct: 331 LLNAE---NDDDINDSDRLNKLAAFQLQMITHAMRFPSVQKIVYSTCSVHAIENERVVSS 387
Query: 292 VLPI--AMSFGFQLA 304
L A + GF LA
Sbjct: 388 ALNSDEASNMGFILA 402
>gi|409078298|gb|EKM78661.1| hypothetical protein AGABI1DRAFT_40935 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 433
Score = 196 bits (498), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 114/255 (44%), Positives = 151/255 (59%), Gaps = 19/255 (7%)
Query: 65 PRYVRVNTLKMDVDSAV-------LELGKQFVVQ----KDDLVPDLLILPPGCDLHVHPL 113
PRYVRVNT D A+ +G F KD+ +PDL + P
Sbjct: 152 PRYVRVNTKFWTSDEAIAYFIKKGFSIGDPFQTSTSFAKDEHIPDLFLFAPQTSFQDDTA 211
Query: 114 IVNGCVFLQGKASSMVAAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELN 171
+G V LQ KAS A L+P K V+DA +APGNKT HL+A+MKGKGKI+A E +
Sbjct: 212 YTSGKVILQDKASCFPAFVLSPPANDKCLVIDATAAPGNKTSHLSAIMKGKGKILAFERD 271
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
++R LK + +G AN+ L+ DFL++DP D Y+ V ILLDPSCSGSG RLDH
Sbjct: 272 RKRFHTLKSMLSKAGCANVLPLNTDFLSIDPSDTTYASVTHILLDPSCSGSGI-VNRLDH 330
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKS 291
LL + + D + +RLNKL+AFQ + + HA+ FP V+++VYSTCS+H +ENE V+ S
Sbjct: 331 LLNAE---NDDDINDSDRLNKLAAFQLQMITHAMRFPSVQKIVYSTCSVHAIENERVVSS 387
Query: 292 VLPI--AMSFGFQLA 304
L A + GF LA
Sbjct: 388 ALNSDEASNMGFILA 402
>gi|301776202|ref|XP_002923528.1| PREDICTED: LOW QUALITY PROTEIN: putative methyltransferase
NSUN5-like [Ailuropoda melanoleuca]
Length = 494
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 118/285 (41%), Positives = 161/285 (56%), Gaps = 29/285 (10%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLELGKQ 87
H+ ++ LA+L V+ V EDL+ + P PR+VRVNTLK + D AV +Q
Sbjct: 101 HRARLKAELARLKVQRCVSRNEDLLEVGSRPGTASQVPRFVRVNTLKTNSDDAVDYFKRQ 160
Query: 88 -FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGKASSM 128
F Q + + DL L+ P DLH HPL G + LQ KAS +
Sbjct: 161 GFSYQGRASSLEDLRGLKGKCFLLDPLLPELLVFPAQTDLHDHPLYRAGHLILQDKASCL 220
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
A LAP PG ++DAC+APGNKT HLAAL+K +GKI A +L+ R+ + + +G +
Sbjct: 221 PATLLAPPPGSHIIDACAAPGNKTSHLAALLKNQGKIFAFDLDAGRLASMATLLARAGVS 280
Query: 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
E+ DFL + P D Y +V+ ILLDPSCSGSG A +L+ A
Sbjct: 281 CCELAEQDFLAVSPSDQRYRQVQYILLDPSCSGSGMPARQLEE--------PGAGTPSQA 332
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL L+ FQ++ALRHAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 333 RLQALAGFQQRALRHALTFPSLQRLVYSTCSLCQEENEDVVQDAL 377
>gi|326435915|gb|EGD81485.1| hypothetical protein PTSG_02202 [Salpingoeca sp. ATCC 50818]
Length = 510
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 123/313 (39%), Positives = 168/313 (53%), Gaps = 28/313 (8%)
Query: 20 VGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
G + +M HK +Q ALA L+ V + L T PRY RVN LK +
Sbjct: 88 TGSLYEAIMRHKDELQTALADLMAERGVDTASALAE--DTLAESMPRYARVNPLKQPEAA 145
Query: 80 AVLELGKQ-FVVQ--------------------KDDLVPDLLILPPGCDLHVHPLIVNGC 118
+ L + F +Q KD + +LL P D H H L G
Sbjct: 146 TLTALEETGFQLQQLHAAGPKSTTTLESRQHYFKDTHLDNLLGFHPRTDFHTHWLYRRGH 205
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+ LQ KAS AA LAP PG +DAC+APGNKT HLAALM KG + A ++++ R+ +
Sbjct: 206 LILQDKASCFPAAILAPPPGSVCIDACAAPGNKTSHLAALMHNKGTVFAFDISRRRMGVM 265
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +KL+G ++ + FL+ DP P + +V+ IL DPSCSGSG + RL L+ +
Sbjct: 266 RRQLKLAGVTCVKTMLKSFLDTDPTHPKFRDVKYILCDPSCSGSGIVS-RLSDLVDVSDA 324
Query: 239 G--HTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
G T + + ERL L+ FQ + + HALSFP VERV YSTCS+HQ ENEDV+ +VL A
Sbjct: 325 GEPQTQEEKQQERLKALAEFQVQVVNHALSFPNVERVTYSTCSVHQEENEDVVAAVL--A 382
Query: 297 MSFGFQLATPFPN 309
+ F+LA P+
Sbjct: 383 ANPSFELAEALPS 395
>gi|432864632|ref|XP_004070383.1| PREDICTED: putative methyltransferase NSUN5-like [Oryzias latipes]
Length = 471
Score = 195 bits (495), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 133/324 (41%), Positives = 176/324 (54%), Gaps = 38/324 (11%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPK-PRYVRVNTLKMDVD 78
G + +M H+ +Q LA++ V+ KV EDL+ A Q P + PRYVRVNTLK V+
Sbjct: 87 GSFKTTMMKHRPRLQAELARMKVKRKVSRNEDLLPAEAQLPSGEQLPRYVRVNTLKTTVE 146
Query: 79 SAVLELG--------------------KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
V L K FV KD L+P+LL+ D H H L G
Sbjct: 147 DVVDYLKRDGYTYQGQASRLDDLTLKEKSFV--KDLLLPELLVFSSKTDFHDHFLYKAGH 204
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+ LQ KAS + A L P G V+DAC+APGNKT HLAA+MK KGK+ A +L+ +R+ +
Sbjct: 205 IILQDKASCLPAYLLKPPSGSHVIDACAAPGNKTSHLAAIMKNKGKLFAFDLDAKRLATM 264
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +G ++ H DFL ++P P Y +V +LLDPSCSGSG L +S
Sbjct: 265 STLLLRAGVTCQQLAHQDFLKVNPDSPQYKDVEYVLLDPSCSGSGMVC------LQDRSS 318
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMS 298
AD T RL L+AFQ + L HA+ FP ++R+VYSTCSIH ENE+VI + L S
Sbjct: 319 ---ADQT---RLASLAAFQLRCLNHAVRFPRLKRLVYSTCSIHSQENEEVITAFLQQNSS 372
Query: 299 FGFQLATP-FPN-GTAEASQFLKA 320
F P +P G A SQ L+A
Sbjct: 373 FRLVPLLPQWPERGLAPLSQCLRA 396
>gi|348568692|ref|XP_003470132.1| PREDICTED: putative methyltransferase NSUN5-like [Cavia porcellus]
Length = 461
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 120/289 (41%), Positives = 163/289 (56%), Gaps = 29/289 (10%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQT--PDVPKPRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 94 LLARHQARLKAELARLKVHRGVSRNEDLLEVGSKLGPASQVPRFVRVNTLKTCPDDVVDY 153
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + +L L+ P DLH HPL G + LQ K
Sbjct: 154 FKRQGFSYQGRASSLEELRALKGKHFALDLLLPELLVFPAQTDLHEHPLYQAGHLILQDK 213
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A LAP PG V+DAC+APGNKT HLAA++K +GKI A +L+ +R+ + +
Sbjct: 214 ASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAAILKNQGKIFAFDLDAKRLASMATLLAR 273
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D Y++V+ ILLDPSCSGSG + +L+ A+P
Sbjct: 274 AGVSCCELAEEDFLAVSPSDTRYAQVQYILLDPSCSGSGMLSRQLEE--------PAAEP 325
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL LSAFQ + LRHALSFP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 326 PSKERLCALSAFQLRVLRHALSFPALQRLVYSTCSLCQEENEDVVRDAL 374
>gi|33416857|gb|AAH55530.1| Zgc:66176 [Danio rerio]
gi|182890860|gb|AAI65602.1| Zgc:66176 protein [Danio rerio]
Length = 483
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 125/313 (39%), Positives = 172/313 (54%), Gaps = 38/313 (12%)
Query: 21 GDAEKFLML-HKGAIQLALAQLLVRNKVKSIEDLM--ALYQTPDVPKPRYVRVNTLKMDV 77
G A K ML H+ +Q ALA++ ++ KV +DL+ ++ QT + PRYVRVNTLK +
Sbjct: 86 GGAWKMTMLKHRARLQAALARIKIKRKVSRNQDLLPSSIQQTQNDVIPRYVRVNTLKTSL 145
Query: 78 DSAVLEL---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVN 116
+ + L GK F+ D + DLL+ D H H L
Sbjct: 146 EDVIDYLKREGFSYQGTPGRLEDLDRLSGKMFLC--DLHLKDLLVFSGKTDFHDHFLYKA 203
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G + LQ KAS + A L P G V+DAC+APGNKT HLAA+MK KGK+ A +L+ +R+
Sbjct: 204 GHIILQDKASCLPAFLLNPPVGSHVIDACAAPGNKTSHLAAIMKNKGKLFAFDLDAKRLS 263
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
+ + +G ++ + DFL +DP++ Y EV+ ILLDPSCSGSG LD L +
Sbjct: 264 TMSTLLLRAGVTCHKLANQDFLKVDPQNSEYKEVKYILLDPSCSGSGMVC-LLDELPETQ 322
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
G RL L+AFQ L HAL FP +ER+VYSTCSIH ENE+V+ + L
Sbjct: 323 EDG---------RLQALAAFQLHCLNHALQFPQLERIVYSTCSIHSQENEEVVTACL--Q 371
Query: 297 MSFGFQLATPFPN 309
+ GF+L P+
Sbjct: 372 QNPGFRLVHLLPD 384
>gi|73957768|ref|XP_536846.2| PREDICTED: putative methyltransferase NSUN5 isoform 2 [Canis lupus
familiaris]
Length = 469
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 116/285 (40%), Positives = 162/285 (56%), Gaps = 29/285 (10%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLELGKQ 87
H+ ++ LA+L V+ +V EDL+ + P PR+VRVNTLK D A+ +Q
Sbjct: 98 HQARLKAELARLKVQRRVSRNEDLLQVGSRPGAASQVPRFVRVNTLKTSSDDAIDYFKRQ 157
Query: 88 -FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGKASSM 128
F Q + + DL L+ P DLH HPL G + LQ KAS +
Sbjct: 158 GFSYQGRASSLEDLRALKGKCFLLDPLLPELLVFPTQTDLHDHPLYQAGHLILQDKASCL 217
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
A LAP PG V+DAC+APGNKT HLAA +K +G+I A +L+ R+ + + +G +
Sbjct: 218 PAMLLAPPPGSHVIDACAAPGNKTSHLAAFLKNQGRIFAFDLDAGRLASMATLLARAGVS 277
Query: 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
E+ DFL + P D Y +V+ ILLDPSCSGSG +L+ T P++
Sbjct: 278 CCELAQEDFLAVSPSDQRYRQVQYILLDPSCSGSGMPTRQLEE-------PGTGTPSKA- 329
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL L+ FQ++ALRHAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 330 RLQALAGFQQRALRHALTFPSLQRLVYSTCSLCQEENEDVVQDAL 374
>gi|449543178|gb|EMD34155.1| hypothetical protein CERSUDRAFT_55626 [Ceriporiopsis subvermispora
B]
Length = 490
Score = 194 bits (492), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 117/299 (39%), Positives = 164/299 (54%), Gaps = 19/299 (6%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK + +L ++ KS +L PRY+RVNT VD A
Sbjct: 90 GPIKQAVLRHKTRLNGEFQKLKIKRGAKSTAELAHSEDARAAQIPRYIRVNTAVWTVDEA 149
Query: 81 VLE-LGKQFVVQ----------KDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
V E L + +V+ D+ +PDLL+ PP PL +G + LQ KAS
Sbjct: 150 VTEFLSRGYVLSGPFQSRKGFANDEHIPDLLLFPPHVHFADDPLYTSGKIILQDKASCFP 209
Query: 130 AAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
A LAP V+DA +APGNKT HL+ALM +GK+ A E +++R LK + +
Sbjct: 210 ACVLAPPAADDSVVIDATAAPGNKTSHLSALMSNRGKLFAFERDRKRFSTLKKMLAKAHC 269
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+E ++ DFL + P D + +V ILLDPSCSGSG RLD+LL + D
Sbjct: 270 RNVEPVNADFLTVSPDDVKFRQVTHILLDPSCSGSGI-VNRLDYLLEAETQNAEED---R 325
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPI--AMSFGFQLA 304
+RL+KL++FQ +RHA+ FP V R+VYSTCSIH ENE V++ L A+ GF+LA
Sbjct: 326 QRLDKLASFQLLMIRHAMKFPSVRRIVYSTCSIHATENEHVVRQALQTEEALGAGFRLA 384
>gi|444720556|gb|ELW61338.1| Putative methyltransferase NSUN5 [Tupaia chinensis]
Length = 635
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/310 (40%), Positives = 173/310 (55%), Gaps = 30/310 (9%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVP--KPRYVRVNTLKMDVD 78
G + L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D
Sbjct: 89 GRWKPLLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGTTCQVPRFVRVNTLKTCSD 148
Query: 79 SAVLELGKQ-FVVQK-----DDL-------------VPDLLILPPGCDLHVHPLIVNGCV 119
A+ +Q F Q DDL +PDLL+ P DLH HPL G +
Sbjct: 149 DAIDYFKRQGFSYQGQASSLDDLKALKGKHFLLDPLLPDLLVFPAQTDLHEHPLYQAGHL 208
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
LQ KAS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ +
Sbjct: 209 ILQDKASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+ +G + E+ DFL + P D Y +V+ ILLDPSCSGSG +L+
Sbjct: 269 TLLARAGVSCCELAEEDFLAVSPSDERYRQVQYILLDPSCSGSGMLTRQLEE-------- 320
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
A ERL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L +
Sbjct: 321 PGAGTPSKERLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVREALQQSPG- 379
Query: 300 GFQLATPFPN 309
F+LA P+
Sbjct: 380 TFRLAPALPS 389
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 58/146 (39%), Positives = 86/146 (58%), Gaps = 9/146 (6%)
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
KI A +L+ +R+ + + +G + E+ DFL + P D Y +V+ ILLDPSCSGSG
Sbjct: 430 KIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDERYRQVQYILLDPSCSGSG 489
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
+L+ A ERL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q
Sbjct: 490 MLTRQLEE--------PGAGTPSKERLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQE 541
Query: 284 ENEDVIKSVLPIAMSFGFQLATPFPN 309
ENEDV++ L + F+LA P+
Sbjct: 542 ENEDVVREALQQSPG-TFRLAPALPS 566
>gi|410984564|ref|XP_003998598.1| PREDICTED: putative methyltransferase NSUN5 isoform 1 [Felis catus]
Length = 430
Score = 193 bits (491), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 160/285 (56%), Gaps = 29/285 (10%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLELGKQ 87
H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D AV +Q
Sbjct: 99 HQARLKAELARLKVHRGVSKNEDLLQVESKPGPASQVPRFVRVNTLKTCCDDAVDYFKRQ 158
Query: 88 -FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGKASSM 128
F Q + + DL L+ P DLH HPL G + LQ KAS +
Sbjct: 159 GFSYQGRASSLEDLRALKGKCFLLDPLLPELLVFPAQTDLHDHPLYQAGHLILQDKASCL 218
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
A LAP PG V+DAC+APGNKT HLAAL+K +GKI A +L+ R+ + + +G +
Sbjct: 219 PAVLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAGRLASMATLLARAGVS 278
Query: 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
E+ DFL + P D Y +V+ ILLDPSCSGSG A RL+ P + A
Sbjct: 279 CCELAEEDFLAISPSDQRYRQVQYILLDPSCSGSGMATRRLEE--PGAGTPSKA------ 330
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 331 RLQALAGFQRRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 375
>gi|119590102|gb|EAW69696.1| hCG39703, isoform CRA_e [Homo sapiens]
Length = 428
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 154/274 (56%), Gaps = 33/274 (12%)
Query: 43 VRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL---------------- 84
V V EDL+ + P PR+VRVNTLK D V
Sbjct: 73 VHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDD 132
Query: 85 -----GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS + A L P PG
Sbjct: 133 LRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGS 190
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G + E+ DFL
Sbjct: 191 HVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 250
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
+ P DP Y EV ILLDPSCSGSG + +L+ T P RL+ L+ FQ++
Sbjct: 251 VSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQR 302
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 303 ALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 336
>gi|193785163|dbj|BAG54316.1| unnamed protein product [Homo sapiens]
Length = 391
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 154/274 (56%), Gaps = 33/274 (12%)
Query: 43 VRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL---------------- 84
V V EDL+ + P PR+VRVNTLK D V
Sbjct: 73 VHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDD 132
Query: 85 -----GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS + A L P PG
Sbjct: 133 LRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGS 190
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G + E+ DFL
Sbjct: 191 HVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 250
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
+ P DP Y EV ILLDPSCSGSG + +L+ T P RL+ L+ FQ++
Sbjct: 251 VSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQR 302
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 303 ALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 336
>gi|270288818|ref|NP_001161820.1| putative methyltransferase NSUN5 isoform 4 [Homo sapiens]
gi|119590100|gb|EAW69694.1| hCG39703, isoform CRA_c [Homo sapiens]
Length = 391
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 115/274 (41%), Positives = 154/274 (56%), Gaps = 33/274 (12%)
Query: 43 VRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLEL---------------- 84
V V EDL+ + P PR+VRVNTLK D V
Sbjct: 73 VHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDD 132
Query: 85 -----GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS + A L P PG
Sbjct: 133 LRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGS 190
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G + E+ DFL
Sbjct: 191 HVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLA 250
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
+ P DP Y EV ILLDPSCSGSG + +L+ T P RL+ L+ FQ++
Sbjct: 251 VSPSDPRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQR 302
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 303 ALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 336
>gi|336370744|gb|EGN99084.1| hypothetical protein SERLA73DRAFT_90270 [Serpula lacrymans var.
lacrymans S7.3]
Length = 465
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 115/286 (40%), Positives = 159/286 (55%), Gaps = 20/286 (6%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK + ++ ++ KS +L T D PRYVR+NTL D A
Sbjct: 91 GPIKQAILRHKTRLHGEFQKIKIKRGAKSNGELA---HTGDTQIPRYVRINTLLWTADEA 147
Query: 81 V-------LELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
+ EL F +K DD VP LL+ P P +G V LQ KAS
Sbjct: 148 IQHFVSRGFELSGPFSSKKGFAKDDHVPHLLLFNPVMQFRDEPSYKSGKVILQDKASCFP 207
Query: 130 AAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
A L P V+DA +APGNKT HL+ALM+ +GK++A E +++R LK + +
Sbjct: 208 AVVLDPPANEDSVVIDATAAPGNKTSHLSALMRNRGKLLAFERDRKRFSTLKTMLSKAEC 267
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+E ++ DFL ++P D Y+ V ILLDPSCSGSG RLD+LL S D +
Sbjct: 268 KNVETINADFLTVEPTDSKYASVSHILLDPSCSGSGI-VNRLDYLLESEQED---DTDQE 323
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL KL++FQ +RHA+ FP V+++VYSTCSIH ENEDV++ L
Sbjct: 324 ERLTKLASFQMLMIRHAMKFPSVKKIVYSTCSIHATENEDVVRQAL 369
>gi|397489213|ref|XP_003815627.1| PREDICTED: LOW QUALITY PROTEIN: putative methyltransferase NSUN5
[Pan paniscus]
Length = 468
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 119/291 (40%), Positives = 162/291 (55%), Gaps = 32/291 (10%)
Query: 25 KFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKM------- 75
K L+ A + LA+L V V EDL+ + P PR+VRVNTLK
Sbjct: 92 KALLGRHQARXVELARLKVLQGVSWNEDLLEVGSRPGPASQLPRFVRVNTLKTCSXLCSY 151
Query: 76 -------------DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
+D GK F++ D L+P+LL+ P DL HPL G + LQ
Sbjct: 152 FKKQGFSYQGRASSLDDLRALKGKHFLL--DSLMPELLVFPAQTDLREHPLYRAGHLILQ 209
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS + A L P PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 210 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLL 269
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T
Sbjct: 270 ARAGVSCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLE-----EPGAGTP 324
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 325 SPA---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 372
>gi|311251116|ref|XP_003124450.1| PREDICTED: putative methyltransferase NSUN5 isoform 1 [Sus scrofa]
Length = 466
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/310 (39%), Positives = 169/310 (54%), Gaps = 30/310 (9%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVD 78
G + L H+ ++ LA+L VR V EDL+ + D PR+VRVNTLK +
Sbjct: 89 GRWKPLLDRHQARLKAELARLKVRRGVSRNEDLLEVGSKSDPASQVPRFVRVNTLKTRSE 148
Query: 79 SAVLELGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCV 119
V +Q F Q + + D+ L+ P DLH HPL G +
Sbjct: 149 DVVDYFKRQGFSYQGQASSLEDIRALKGKCFLLDPLLPELLVFPAQTDLHEHPLYQAGHL 208
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
LQ KAS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ +
Sbjct: 209 ILQDKASCLPAVLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMA 268
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+ +G + E+ DFL + P D Y +V+ ILLDPSCSGSG RL+
Sbjct: 269 TLLARAGVSCCELAEQDFLAVAPTDQRYRQVQYILLDPSCSGSGMLTRRLEE-------- 320
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
A ERL L+ FQ++AL HAL+FP + R+VYSTCS+ Q ENEDV+++ L +
Sbjct: 321 PGAGAPSQERLRALAGFQQRALSHALTFPALRRLVYSTCSLCQEENEDVVQAALQQSPG- 379
Query: 300 GFQLATPFPN 309
F+LA P+
Sbjct: 380 AFRLAPVLPS 389
>gi|348514740|ref|XP_003444898.1| PREDICTED: putative methyltransferase NSUN5-like [Oreochromis
niloticus]
Length = 495
Score = 192 bits (487), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 123/336 (36%), Positives = 179/336 (53%), Gaps = 46/336 (13%)
Query: 3 EARRIGLHTNLRHPLWPV--------------GDAEKFLMLHKGAIQLALAQLLVRNKVK 48
E+ ++ HT L+ PL V G + +M H+ +Q LA++ V+ KV
Sbjct: 55 ESTKLLRHTKLKMPLAKVLVYDLLIGQGLKCGGSWKAMMMKHRSRLQAELARMKVKQKVS 114
Query: 49 SIEDLM--ALYQTPDVPKPRYVRVNTLKMDVDSAV-------------------LELGKQ 87
EDL+ ++ PRYVRVNTLK V+ V L L +
Sbjct: 115 RNEDLLPCSVKHPAGDQLPRYVRVNTLKTTVEDVVDYLKRDGFSYLGKASRLEDLSLKDR 174
Query: 88 FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSA 147
+ + D +P+LL+ P D H H L G + LQ KAS + A L+P PG ++DAC+A
Sbjct: 175 YFLS-DLHLPELLVFSPKTDFHDHFLYKAGHIVLQDKASCLPAHLLSPSPGSHIIDACAA 233
Query: 148 PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 207
PGNKT LAA+MK KG++ A +L+ +R+ + + +G ++ + DFL +DP +P Y
Sbjct: 234 PGNKTSQLAAIMKNKGRLFAFDLDGKRLATMSTLLLRAGVTCQQLANQDFLKVDPDNPQY 293
Query: 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 267
+V ILLDPSCSGSG L + S E RL L++FQ + L HAL F
Sbjct: 294 KDVEYILLDPSCSGSGMVC------LQDNTSADQE--KEQARLASLASFQLRCLNHALRF 345
Query: 268 PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQL 303
P ++R+VYSTCSIH+ ENE+V+ + L + GF+L
Sbjct: 346 PRLKRLVYSTCSIHKQENEEVVAACL--QQNPGFRL 379
>gi|389749798|gb|EIM90969.1| S-adenosyl-L-methionine-dependent methyltransferase [Stereum
hirsutum FP-91666 SS1]
Length = 516
Score = 191 bits (486), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 119/307 (38%), Positives = 167/307 (54%), Gaps = 42/307 (13%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK---------------- 64
G ++ ++ HK ++ + ++ V+S E+L QT DV
Sbjct: 89 GPVKQAILKHKTRLRSEFQRAKIKRGVRSDEELA---QTDDVRAGESWGLRKVSTATKPT 145
Query: 65 -----PRYVRVNTLKMDVDSAV-------LELGKQFVVQK---DDLVPDLLILPPGCDLH 109
PRYVRVNTLK + V ++G + D+ +P+LL LPP H
Sbjct: 146 LSARIPRYVRVNTLKSTHEEVVNVLQSRGYQVGDPLQAKHYALDEHIPELLSLPPNIQFH 205
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWK---VLDACSAPGNKTVHLAALMKGKGKIV 166
PL +G + LQ KAS AA LAP P V+DA +APGNKT HL+ALM+ KGK+
Sbjct: 206 DDPLYFSGKIILQDKASCFPAAVLAP-PATDTAVVIDATAAPGNKTSHLSALMRNKGKLF 264
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A E +++R L+ + +G N E L+ DF N++P + YS+V ILLDPSCSGSG
Sbjct: 265 AFERDRKRFTTLQSMLSKAGCKNTEALNVDFTNIEPTNSNYSQVTHILLDPSCSGSGI-V 323
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
RLD+LL + D +RL+KLSAFQ ++HA+ FP V+++VYSTCS+H ENE
Sbjct: 324 NRLDYLLDTE---EETDSVHQDRLSKLSAFQLTMIKHAMKFPSVQKIVYSTCSVHAAENE 380
Query: 287 DVIKSVL 293
V+ L
Sbjct: 381 HVVHQAL 387
>gi|336383508|gb|EGO24657.1| hypothetical protein SERLADRAFT_449415 [Serpula lacrymans var.
lacrymans S7.9]
Length = 473
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 113/286 (39%), Positives = 158/286 (55%), Gaps = 17/286 (5%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK + ++ ++ KS +L + PRYVR+NTL D A
Sbjct: 91 GPIKQAILRHKTRLHGEFQKIKIKRGAKSNGELAHTGDSRGAQIPRYVRINTLLWTADEA 150
Query: 81 V-------LELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
+ EL F +K DD VP LL+ P P +G V LQ KAS
Sbjct: 151 IQHFVSRGFELSGPFSSKKGFAKDDHVPHLLLFNPVMQFRDEPSYKSGKVILQDKASCFP 210
Query: 130 AAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
A L P V+DA +APGNKT HL+ALM+ +GK++A E +++R LK + +
Sbjct: 211 AVVLDPPANEDSVVIDATAAPGNKTSHLSALMRNRGKLLAFERDRKRFSTLKTMLSKAEC 270
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+E ++ DFL ++P D Y+ V ILLDPSCSGSG RLD+LL S D +
Sbjct: 271 KNVETINADFLTVEPTDSKYASVSHILLDPSCSGSGI-VNRLDYLLESEQED---DTDQE 326
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL KL++FQ +RHA+ FP V+++VYSTCSIH ENEDV++ L
Sbjct: 327 ERLTKLASFQMLMIRHAMKFPSVKKIVYSTCSIHATENEDVVRQAL 372
>gi|395536532|ref|XP_003770269.1| PREDICTED: putative methyltransferase NSUN5 [Sarcophilus harrisii]
Length = 445
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 118/290 (40%), Positives = 160/290 (55%), Gaps = 45/290 (15%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPK-PRYVRVNTLKMDVDSAVLEL 84
L HK +Q A+L V+ V EDL+ ++ V K PR+VRVNTLK +D AV L
Sbjct: 94 LSRHKARLQAEFARLKVKRCVSRNEDLLESVPGAAQVAKLPRFVRVNTLKTKLDDAVDYL 153
Query: 85 ---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
GK+F + D L+P+LL+ P G D H HPL G + LQ
Sbjct: 154 KREGYSYQGRASGLDELQALEGKRFFL--DSLLPELLVFPSGTDFHKHPLYQAGHLILQD 211
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
K S APGNKT HLAAL+K +GKI A +L+ R+ + +
Sbjct: 212 KVRSQTXXXXX------------APGNKTSHLAALLKNQGKIFAFDLDAGRLATMATLLT 259
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
+G + E+ + DFL++ P DP Y +V+ ILLDPSCSGSG A+ +L+ P S
Sbjct: 260 RAGVSCCEIANKDFLSVSPSDPRYCQVQYILLDPSCSGSGMASRQLEE--PGAGS----- 312
Query: 244 PTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ ERL L+ FQ++AL HALSFP ++R+VYSTCS+ Q ENEDV++ VL
Sbjct: 313 -SSQERLQALAGFQRRALSHALSFPALQRLVYSTCSVCQEENEDVVRDVL 361
>gi|440908449|gb|ELR58463.1| Putative methyltransferase NSUN5 [Bos grunniens mutus]
Length = 462
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 169/305 (55%), Gaps = 30/305 (9%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L VR V EDL+ + P PR+VRVN LK + A+
Sbjct: 94 LLERHQARLKAELARLKVRQGVSRNEDLLEVGSNPGSASQVPRFVRVNILKTCAEDAIDY 153
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + D+ L+ P DLH HPL G + LQ K
Sbjct: 154 FKRQGFSYQGRASSLNDIRALKGKCFLLDPLLPELLVFPAQTDLHDHPLYQAGHLILQDK 213
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A + + +R+ + +
Sbjct: 214 ASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDQDAKRLASMATLLAR 273
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D Y +V+ ILLDPSCSGSG + +L+ T P
Sbjct: 274 AGVSCCELAEQDFLAVSPSDQRYCQVQYILLDPSCSGSGMPSRQLE-----EPKSCTPSP 328
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
ERL L+AFQ++AL HAL+FP + R+VYSTCS+ Q ENEDV+++ L + F+LA
Sbjct: 329 ---ERLRALAAFQQRALSHALTFPALRRLVYSTCSVCQEENEDVVRAALQQSPG-AFRLA 384
Query: 305 TPFPN 309
P+
Sbjct: 385 PVLPS 389
>gi|152149576|pdb|2B9E|A Chain A, Human Nsun5 Protein
Length = 309
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 109/250 (43%), Positives = 146/250 (58%), Gaps = 31/250 (12%)
Query: 65 PRYVRVNTLKMDVDSAVLEL---------------------GKQFVVQKDDLVPDLLILP 103
PR+VRVNTLK D V GK F++ D L+P+LL+ P
Sbjct: 11 PRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFP 68
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
DLH HPL G + LQ +AS + A L P PG V+DAC+APGNKT HLAAL+K +G
Sbjct: 69 AQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQG 128
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
KI A +L+ +R+ + + +G + E+ DFL + P DP Y EV ILLDPSCSGSG
Sbjct: 129 KIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYILLDPSCSGSG 188
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
+ +L+ T P RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q
Sbjct: 189 MPSRQLE-----EPGAGTPSPV---RLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQE 240
Query: 284 ENEDVIKSVL 293
ENEDV++ L
Sbjct: 241 ENEDVVRDAL 250
>gi|156121251|ref|NP_001095773.1| putative methyltransferase NSUN5 [Bos taurus]
gi|151556204|gb|AAI49961.1| NSUN5 protein [Bos taurus]
gi|296472990|tpg|DAA15105.1| TPA: NOL1/NOP2/Sun domain family, member 5 [Bos taurus]
Length = 462
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 169/305 (55%), Gaps = 30/305 (9%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L VR V EDL+ + P PR+VRVN LK + A+
Sbjct: 94 LLERHQARLKAELARLKVRQGVSRNEDLLEVGSKPGSASQVPRFVRVNILKTCAEDAIDY 153
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + D+ L+ P DLH HPL G + LQ K
Sbjct: 154 FKRQGFSYQGRASSLNDIRALKGKCFLLDPLLPELLVFPAQTDLHNHPLYQAGHLILQDK 213
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A + + +R+ + +
Sbjct: 214 ASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDQDAKRLASMATLLAR 273
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D Y +V+ ILLDPSCSGSG + +L+ T P
Sbjct: 274 AGVSCCELAEQDFLAVSPSDQRYCQVQYILLDPSCSGSGMPSRQLE-----EPKSCTPSP 328
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
ERL L+AFQ++AL HAL+FP + R+VYSTCS+ Q ENEDV+++ L + F+LA
Sbjct: 329 ---ERLRALAAFQQRALSHALTFPALRRLVYSTCSVCQEENEDVVRAALQQSPG-AFRLA 384
Query: 305 TPFPN 309
P+
Sbjct: 385 PVLPS 389
>gi|392564213|gb|EIW57391.1| S-adenosyl-L-methionine-dependent methyltransferase [Trametes
versicolor FP-101664 SS1]
Length = 475
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 110/286 (38%), Positives = 159/286 (55%), Gaps = 18/286 (6%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ H+ +Q +L ++ KS +L PRYVRVN A
Sbjct: 90 GPIKQAVLRHRTRLQSEFTRLKIKRGAKSNSELAQTDDARAAAIPRYVRVNRTCWSSKDA 149
Query: 81 VLELGKQF-----------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
+ L Q +++D+ +PDL P PL ++G + LQ KAS
Sbjct: 150 LKALKAQGYEEGDPLTSNKALKRDEHIPDLFAFHPSVRFTDDPLYLSGKIILQDKASCFP 209
Query: 130 AAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
A LAP + V+DA +APGNKT HL A+M+ KGK++A E +++R LK + +
Sbjct: 210 AHVLAPPARDDVVVIDATAAPGNKTSHLCAIMQNKGKLLAFERDRKRFGTLKTMLNKAHC 269
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
+N+E ++ DFL P DP Y V ILLDPSCSGSG RLDHLL + + +
Sbjct: 270 SNVEAVNLDFLTALPSDPKYKSVTHILLDPSCSGSGI-VNRLDHLLDNEQD----EDEDS 324
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERLNKL+AFQ K +RHA++FP V+R+VYSTCS+H +ENE V++ +
Sbjct: 325 ERLNKLAAFQLKMIRHAMTFPSVKRIVYSTCSVHAIENEHVVRQAI 370
>gi|393221282|gb|EJD06767.1| S-adenosyl-L-methionine-dependent methyltransferase [Fomitiporia
mediterranea MF3/22]
Length = 504
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 114/287 (39%), Positives = 163/287 (56%), Gaps = 16/287 (5%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK +Q L ++ V+ VKSI DL PRYVRVNT+ + A
Sbjct: 92 GPIKQAVLRHKTRLQSELTKIKVKRGVKSISDLAHGGDERADLIPRYVRVNTVLWSTEEA 151
Query: 81 VL------------ELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
+ L + VQ D +P+LL+ P + PL+ +G + LQ KAS
Sbjct: 152 IKCFLSHGYVEDGDPLDSKKTVQCDQHIPNLLLFHPLASFNDSPLLSSGKIILQDKASCF 211
Query: 129 VAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
A L+P + +DA +APGNKT L+A+MKG+GK+ A E +K+R LK ++ +
Sbjct: 212 PAMILSPPAHTQTRAIDATAAPGNKTTLLSAIMKGRGKLYAFERDKKRFATLKKMVEKAH 271
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
N+E + DF+++DP D Y+ V ILLDPSCSGSG RLDHLL + + +
Sbjct: 272 CGNVEPTNVDFMSVDPHDSKYAGVSHILLDPSCSGSGI-VNRLDHLLDTEDEDEI-EGGQ 329
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL KL+AFQ ++HA+ FP V ++VYSTCS+H VENEDV+ L
Sbjct: 330 DERLQKLAAFQLLMIKHAMKFPAVTKIVYSTCSVHAVENEDVVSQAL 376
>gi|156396524|ref|XP_001637443.1| predicted protein [Nematostella vectensis]
gi|156224555|gb|EDO45380.1| predicted protein [Nematostella vectensis]
Length = 464
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 109/307 (35%), Positives = 168/307 (54%), Gaps = 24/307 (7%)
Query: 15 HPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
H L G ++ + +K ++Q ALA++ ++ KV +DL+ PRY R+NTL
Sbjct: 83 HGLKCGGKFKQSIARNKSSLQSALAKVKIKAKVSRNKDLLPKSVQTAGTIPRYARINTLL 142
Query: 75 MDVDSAVLELGKQF-----------------VVQKDDLVPDLLILPPGCDLHVHPLIVNG 117
D + ++ + +D +P++L+ PP DLH H L +NG
Sbjct: 143 TTADKVIKHFQEESYHLVPSTDKRLYVEGSKIFAQDPHIPEVLVFPPSTDLHDHTLYING 202
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
+ LQ KAS + A ++ PG V+DAC+APGNK+ HLAA + G++ + +++ R+
Sbjct: 203 HILLQDKASCLPAHVISLPPGAHVIDACAAPGNKSSHLAAKLNNNGRVFSFDISASRLAV 262
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
++ +K +GA + H FL++DP+ Y V I++DPSCSGSG + RLD L+
Sbjct: 263 MQKQMKKAGATCVVTEHKSFLDVDPRSSQYRNVEYIVVDPSCSGSGIIS-RLDGLV---- 317
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
S D + +RL L+ FQ L HA SFP V++V YSTCSIH ENEDV+ L ++
Sbjct: 318 SDEQEDDLQ-QRLESLADFQLSVLTHAFSFPAVKKVAYSTCSIHSQENEDVVHKALKVSQ 376
Query: 298 SFGFQLA 304
F+LA
Sbjct: 377 G-QFELA 382
>gi|443700527|gb|ELT99424.1| hypothetical protein CAPTEDRAFT_211590, partial [Capitella teleta]
Length = 341
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/252 (42%), Positives = 142/252 (56%), Gaps = 30/252 (11%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQ---------------------KDDLVPDLLILP 103
PRYVRVNTLK+ V + ++ Q +D +P+LL+
Sbjct: 27 PRYVRVNTLKVSVKEVIGYFAREDFTQVTTSSARFMETVSSLKPRHFFQDPHIPELLVFA 86
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
G DLH H G + LQ KAS + A AL P PG V+D C+APGNKT HLAA+M+ +G
Sbjct: 87 AGTDLHDHTYYKTGLIILQDKASCIPAFALQPPPGSHVVDCCAAPGNKTTHLAAIMQNQG 146
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+++A + + +R + I +GA+ I DFL +DP A+ +VR +L+DPSCSGSG
Sbjct: 147 RVIAFDRDMKRFSTMNTLIIRAGASCIRSELKDFLKVDPN--AHKDVRYLLVDPSCSGSG 204
Query: 224 --TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIH 281
RLD + S E RL KLS FQ + L+HAL+FP ERVVYSTCSIH
Sbjct: 205 DFCIVGRLDDFIESEGGKQ-----EKSRLEKLSNFQAQILKHALAFPNAERVVYSTCSIH 259
Query: 282 QVENEDVIKSVL 293
+ ENE V++ VL
Sbjct: 260 EQENESVVRDVL 271
>gi|345801159|ref|XP_003434780.1| PREDICTED: putative methyltransferase NSUN5 isoform 1 [Canis lupus
familiaris]
Length = 391
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 113/272 (41%), Positives = 155/272 (56%), Gaps = 29/272 (10%)
Query: 43 VRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLELGKQ-FVVQ-KDDLVPD 98
V+ +V EDL+ + P PR+VRVNTLK D A+ +Q F Q + + D
Sbjct: 73 VQRRVSRNEDLLQVGSRPGAASQVPRFVRVNTLKTSSDDAIDYFKRQGFSYQGRASSLED 132
Query: 99 L-----------------LILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKV 141
L L+ P DLH HPL G + LQ KAS + A LAP PG V
Sbjct: 133 LRALKGKCFLLDPLLPELLVFPTQTDLHDHPLYQAGHLILQDKASCLPAMLLAPPPGSHV 192
Query: 142 LDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201
+DAC+APGNKT HLAA +K +G+I A +L+ R+ + + +G + E+ DFL +
Sbjct: 193 IDACAAPGNKTSHLAAFLKNQGRIFAFDLDAGRLASMATLLARAGVSCCELAQEDFLAVS 252
Query: 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
P D Y +V+ ILLDPSCSGSG +L+ P T P++ RL L+ FQ++AL
Sbjct: 253 PSDQRYRQVQYILLDPSCSGSGMPTRQLEE--PG-----TGTPSKA-RLQALAGFQQRAL 304
Query: 262 RHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RHAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 305 RHALTFPSLQRLVYSTCSLCQEENEDVVQDAL 336
>gi|74140144|dbj|BAE33793.1| unnamed protein product [Mus musculus]
Length = 465
Score = 187 bits (474), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 169/305 (55%), Gaps = 30/305 (9%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--VPKPRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ P PR+VRVNTLK + A+
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLQESSRPGQAYQVPRFVRVNTLKTRPEDAIDY 153
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + DL L+ P DLH HPL G + LQ K
Sbjct: 154 FKRQGFSYQGRASSLEDLRALKGQHFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQDK 213
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A L+P PG V+DAC+APGNKT ++AAL+K +GKI A + + +R+ + +
Sbjct: 214 ASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLVAR 273
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D YS+V+ ILLDPSCSGSG + +L+ H G P
Sbjct: 274 AGVSCCELAEKDFLTVSPSDQRYSQVQYILLDPSCSGSGMLSRQLEE----HGEG---TP 326
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
++ ERL L+ FQ++AL HAL FP ++R+VYSTCS+ Q ENEDV++ L S F+LA
Sbjct: 327 SK-ERLQALAGFQQRALCHALRFPSLQRLVYSTCSLCQEENEDVVQEALQ-HNSGTFRLA 384
Query: 305 TPFPN 309
P
Sbjct: 385 PVLPT 389
>gi|410984566|ref|XP_003998599.1| PREDICTED: putative methyltransferase NSUN5 isoform 2 [Felis catus]
Length = 391
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 116/272 (42%), Positives = 152/272 (55%), Gaps = 29/272 (10%)
Query: 43 VRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLELGKQ-FVVQ-KDDLVPD 98
V V EDL+ + P PR+VRVNTLK D AV +Q F Q + + D
Sbjct: 73 VHRGVSKNEDLLQVESKPGPASQVPRFVRVNTLKTCCDDAVDYFKRQGFSYQGRASSLED 132
Query: 99 L-----------------LILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKV 141
L L+ P DLH HPL G + LQ KAS + A LAP PG V
Sbjct: 133 LRALKGKCFLLDPLLPELLVFPAQTDLHDHPLYQAGHLILQDKASCLPAVLLAPPPGSHV 192
Query: 142 LDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201
+DAC+APGNKT HLAAL+K +GKI A +L+ R+ + + +G + E+ DFL +
Sbjct: 193 IDACAAPGNKTSHLAALLKNQGKIFAFDLDAGRLASMATLLARAGVSCCELAEEDFLAIS 252
Query: 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
P D Y +V+ ILLDPSCSGSG A RL+ P + A RL L+ FQ++AL
Sbjct: 253 PSDQRYRQVQYILLDPSCSGSGMATRRLEE--PGAGTPSKA------RLQALAGFQRRAL 304
Query: 262 RHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 305 CHALTFPSLQRLVYSTCSLCQEENEDVVRDAL 336
>gi|154146245|ref|NP_663389.2| putative methyltransferase NSUN5 [Mus musculus]
gi|118573086|sp|Q8K4F6.2|NSUN5_MOUSE RecName: Full=Putative methyltransferase NSUN5; AltName:
Full=NOL1/NOP2/Sun domain family member 5; AltName:
Full=Williams-Beuren syndrome chromosomal region 20A
protein homolog
gi|26347971|dbj|BAC37634.1| unnamed protein product [Mus musculus]
gi|74146333|dbj|BAE28935.1| unnamed protein product [Mus musculus]
gi|148687420|gb|EDL19367.1| NOL1/NOP2/Sun domain family, member 5 [Mus musculus]
gi|183396899|gb|AAI65967.1| NOL1/NOP2/Sun domain family, member 5 [synthetic construct]
Length = 465
Score = 187 bits (474), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 169/305 (55%), Gaps = 30/305 (9%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--VPKPRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ P PR+VRVNTLK + A+
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLQESSRPGQAYQVPRFVRVNTLKTRPEDAIDY 153
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + DL L+ P DLH HPL G + LQ K
Sbjct: 154 FKRQGFSYQGRASSLEDLRALKGQHFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQDK 213
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A L+P PG V+DAC+APGNKT ++AAL+K +GKI A + + +R+ + +
Sbjct: 214 ASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLVAR 273
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D YS+V+ ILLDPSCSGSG + +L+ H G P
Sbjct: 274 AGVSCCELAEKDFLTVSPSDQRYSQVQYILLDPSCSGSGMLSRQLEE----HGEG---TP 326
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
++ ERL L+ FQ++AL HAL FP ++R+VYSTCS+ Q ENEDV++ L S F+LA
Sbjct: 327 SK-ERLQALAGFQQRALCHALRFPSLQRLVYSTCSLCQEENEDVVQEALQ-HNSGTFRLA 384
Query: 305 TPFPN 309
P
Sbjct: 385 PVLPT 389
>gi|21552756|gb|AAM62311.1|AF412029_1 Williams-Beuren syndrome critical region protein 20 [Mus musculus]
Length = 465
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 169/305 (55%), Gaps = 30/305 (9%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--VPKPRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ P PR+VRVNTLK + A+
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLQESSRPGHAYQVPRFVRVNTLKTRPEDAIDY 153
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + DL L+ P DLH HPL G + LQ K
Sbjct: 154 FKRQGFSYQGRASSLEDLRALKGQHFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQDK 213
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A L+P PG V+DAC+APGNKT ++AAL+K +GKI A + + +R+ + +
Sbjct: 214 ASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLVAR 273
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D YS+V+ ILLDPSCSGSG + +L+ H G P
Sbjct: 274 AGVSCCELAEKDFLTVSPSDQRYSQVQYILLDPSCSGSGMLSRQLEE----HGEG---TP 326
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
++ ERL L+ FQ++AL HAL FP ++R+VYSTCS+ Q ENEDV++ L S F+LA
Sbjct: 327 SK-ERLQALAGFQQRALCHALRFPSLQRLVYSTCSLCQEENEDVVQEALQ-HNSGTFRLA 384
Query: 305 TPFPN 309
P
Sbjct: 385 PVLPT 389
>gi|431898170|gb|ELK06865.1| Putative methyltransferase NSUN5 [Pteropus alecto]
Length = 381
Score = 187 bits (474), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 118/289 (40%), Positives = 165/289 (57%), Gaps = 29/289 (10%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D +
Sbjct: 93 LLNRHQARLKAELARLKVHRGVSRNEDLLEVGCRPGPASQVPRFVRVNTLKTCSDDTIDY 152
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + DL L+ P DLH HPL G + LQ K
Sbjct: 153 FKRQGFSYQGRASSLEDLRALRGKCFLLDPLLPELLVFPAQTDLHEHPLYQAGHLILQDK 212
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + +
Sbjct: 213 ASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLAR 272
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + ++ DFL + P D Y +V+ ILLDPSCSGSG +L+ SG A P
Sbjct: 273 AGVSCCQLAEEDFLAVSPSDQRYRQVQYILLDPSCSGSGMLTRKLEE------SGAGA-P 325
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
++ +RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 326 SK-KRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQEENEDVVQDAL 373
>gi|325180419|emb|CCA14824.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 503
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 122/313 (38%), Positives = 171/313 (54%), Gaps = 26/313 (8%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQ---TPDVPKPRYVRVNTLKMDV 77
G ++ +M H A++ AL ++ ++ KV+ EDL+ L + + RYVRVNTLK
Sbjct: 107 GFLKREIMKHANALREALVRMKIKEKVRDHEDLLPLENRKCSTLLDISRYVRVNTLKAQ- 165
Query: 78 DSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKP 137
+ + E + Q D +PDLL+LP +++ H L+ G + LQ KAS A L P
Sbjct: 166 KAEIAEFTETTGAQHDVHIPDLLVLPRNIEVYDHDLVKEGKLILQDKASCFPAYVLLSDP 225
Query: 138 GWK---VLDACSAPGNKTVHLAAL-------MKGKGKIVACELNKERVRRLKDTIKLSGA 187
W ++DAC+APGNKT HLA L M K K+ A + + R++ L+ +K GA
Sbjct: 226 AWNGGDIIDACAAPGNKTSHLAMLLDKKAVGMSTKSKVFAFDRSAARLKILESRLKSCGA 285
Query: 188 ANIEVLH-GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP-------SHASG 239
I + DFLN D DP Y+ V+AILLDPSCSGSG + R DHLL +
Sbjct: 286 DGIVLASCQDFLNTDIHDPRYANVKAILLDPSCSGSGMNS-RFDHLLDIASRPEMTEYDL 344
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL---PIA 296
D T +R+ L++FQ LR A SF V+RVVYSTCS+ + ENE+V+ + L P
Sbjct: 345 EQEDGTTQKRIESLASFQLLMLRKAFSFDQVDRVVYSTCSVFKSENEEVVAAALSTQPAD 404
Query: 297 MSFGFQLATPFPN 309
S FQL P+
Sbjct: 405 KSNRFQLKECLPH 417
>gi|159480252|ref|XP_001698198.1| hypothetical protein CHLREDRAFT_41764 [Chlamydomonas reinhardtii]
gi|158273696|gb|EDO99483.1| predicted protein [Chlamydomonas reinhardtii]
Length = 221
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/190 (50%), Positives = 125/190 (65%), Gaps = 5/190 (2%)
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
V LQ KAS M A AL+P PGW V+D C+APGNKT HLAA+M+ KG+++A + + +R+ RL
Sbjct: 1 VVLQSKASCMPAHALSPAPGWTVVDCCAAPGNKTTHLAAIMRNKGRVIAFDKDPKRLARL 60
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
K + +GA+ ++ DFL++DP DP + +VR +LLDPSCSGSGT RLDH S
Sbjct: 61 KANAERTGASCVQARLQDFLSIDPTDPEFGQVRGVLLDPSCSGSGTTFTRLDHFGSLKGS 120
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMS 298
E R+ +L+ FQ AL HAL FP +ER+VYSTCS+H ENE V+ L A
Sbjct: 121 R-----VEAARVAQLARFQATALSHALRFPALERLVYSTCSVHVAENEAVVAGALAQAAE 175
Query: 299 FGFQLATPFP 308
G +LA PFP
Sbjct: 176 AGLELADPFP 185
>gi|449276528|gb|EMC85000.1| Putative methyltransferase NSUN5, partial [Columba livia]
Length = 334
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 112/266 (42%), Positives = 156/266 (58%), Gaps = 34/266 (12%)
Query: 65 PRYVRVNTLKMDVD-----------------SAVLEL----GKQFVVQKDDLVPDLLILP 103
PRYVRVN+LK VD ++V EL GK+F++ LL+ P
Sbjct: 5 PRYVRVNSLKTCVDDVVDFFKRQGYSYLGKAASVEELSALSGKKFLLDLHLPE--LLVFP 62
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
P D H + L +G + LQ KAS + A L+P PG V+DAC+APGNKT HLAA+++ KG
Sbjct: 63 PQTDFHDNVLYTSGHIILQDKASCLPAFLLSPAPGSHVIDACAAPGNKTSHLAAILQNKG 122
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+I A +++ +R+ + + +G ++ DFL +DP DP Y +V ILLDPSCSGSG
Sbjct: 123 QIFAFDVDTKRLATMNTMLMRAGVTAFQLAQQDFLTVDPTDPKYRKVTHILLDPSCSGSG 182
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
LP + +A ERL L+ FQ+KAL HALSFP ++R+VYSTCS+H+
Sbjct: 183 MVTR-----LPQEEAAPSA-----ERLRALAGFQRKALSHALSFPALQRLVYSTCSLHRE 232
Query: 284 ENEDVIKSVLPIAMSFGFQLATPFPN 309
ENE V+++VL S F+L FP+
Sbjct: 233 ENEAVVEAVLRDHGS-AFRLVNTFPS 257
>gi|353237388|emb|CCA69362.1| related to NOL1R protein [Piriformospora indica DSM 11827]
Length = 474
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 115/300 (38%), Positives = 169/300 (56%), Gaps = 21/300 (7%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM---DV 77
G ++ ++ HK + L ++ V+ V +EDL R+VR+NTLK D+
Sbjct: 92 GPIKQAVLKHKTRLSAELVKVKVKRGVTKVEDLAVSTAGSSGNGRRWVRLNTLKSSQEDI 151
Query: 78 DSAVLELGKQFVVQKDDL----------VPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
A+ + G +V + DL +P+L+ + P + L G + +Q KAS
Sbjct: 152 LRALEKEGFTYVDGEHDLSGKAFILDRHIPNLVAIAPSVRIQESTLFNEGKLIIQDKASC 211
Query: 128 MVAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
A L P P V+DA +APGNKT HL+ALM+G+G+I A E +++R + LK ++ +
Sbjct: 212 FPAFVLDPPSNPNTHVIDATAAPGNKTSHLSALMQGRGRITAFERDRKRFQTLKTMLERA 271
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
GA+N+ + DFL++DP D Y+ V ILLDPSCSGSG RLDHL+ + G D
Sbjct: 272 GASNVMPKNQDFLSVDPNDVEYANVTHILLDPSCSGSGI-VNRLDHLVQTENEG---DSE 327
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPI--AMSFGFQL 303
+RL KL++FQ +RHA+ FP + R+VYSTCSIH ENE+V+ L A+ GF L
Sbjct: 328 TDKRLEKLASFQLTMIRHAMKFPSLRRLVYSTCSIHAKENEEVVIQALECDEAIQGGFLL 387
>gi|335284221|ref|XP_003354543.1| PREDICTED: putative methyltransferase NSUN5 isoform 2 [Sus scrofa]
Length = 391
Score = 185 bits (470), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 117/288 (40%), Positives = 158/288 (54%), Gaps = 30/288 (10%)
Query: 43 VRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLELGKQ-FVVQ-KDDLVPD 98
VR V EDL+ + D PR+VRVNTLK + V +Q F Q + + D
Sbjct: 73 VRRGVSRNEDLLEVGSKSDPASQVPRFVRVNTLKTRSEDVVDYFKRQGFSYQGQASSLED 132
Query: 99 L-----------------LILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKV 141
+ L+ P DLH HPL G + LQ KAS + A LAP PG V
Sbjct: 133 IRALKGKCFLLDPLLPELLVFPAQTDLHEHPLYQAGHLILQDKASCLPAVLLAPPPGSHV 192
Query: 142 LDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201
+DAC+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G + E+ DFL +
Sbjct: 193 IDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEQDFLAVA 252
Query: 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
P D Y +V+ ILLDPSCSGSG RL+ A ERL L+ FQ++AL
Sbjct: 253 PTDQRYRQVQYILLDPSCSGSGMLTRRLEE--------PGAGAPSQERLRALAGFQQRAL 304
Query: 262 RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
HAL+FP + R+VYSTCS+ Q ENEDV+++ L + F+LA P+
Sbjct: 305 SHALTFPALRRLVYSTCSLCQEENEDVVQAALQQSPG-AFRLAPVLPS 351
>gi|393241527|gb|EJD49049.1| S-adenosyl-L-methionine-dependent methyltransferase [Auricularia
delicata TFB-10046 SS5]
Length = 483
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/290 (39%), Positives = 162/290 (55%), Gaps = 21/290 (7%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK + L + ++ ++ EDL+ PRYVRVNTLK ++ A
Sbjct: 92 GPLKQAILRHKTRLHAELTRAKIKRGARTNEDLIQHADPRAASIPRYVRVNTLKTSIEDA 151
Query: 81 VLEL------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
+ +L GK FV KD+ VP+LL + P V G + LQ KAS
Sbjct: 152 LRDLESRGYTPGDESSGKTFV--KDEHVPNLLAFDARAAMVDDPAYVRGELILQDKASCF 209
Query: 129 VAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
A L P V+DA +APGNKT HLAALM +G + A E +K R + L+ + +G
Sbjct: 210 PALVLNPPSHDDAVVIDATAAPGNKTSHLAALMGNRGTLYAFERDKRRFKTLETMLSRAG 269
Query: 187 AANIEVLHGDFLNLDP---KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
A+N+ + DFL++DP ++ Y+ ILLDPSCSGSG RLD+LL S D
Sbjct: 270 ASNVRPRNVDFLSIDPNKKENTEYARATHILLDPSCSGSGIV-NRLDYLLSSDGDEEVDD 328
Query: 244 PTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
E ERL +L+AFQ+ + HA++FP V R+VYSTCS+H ENE V+++ L
Sbjct: 329 ALE-ERLERLAAFQQSMIAHAMTFPNVRRIVYSTCSVHATENERVVRAAL 377
>gi|344289955|ref|XP_003416706.1| PREDICTED: putative methyltransferase NSUN5 [Loxodonta africana]
Length = 476
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 161/289 (55%), Gaps = 29/289 (10%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--VPKPRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + P + PR+VRVN LK +D +
Sbjct: 104 LLARHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPALQVPRFVRVNALKTCIDDVIDY 163
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F + + + DL L+ P DLH HPL G + LQ K
Sbjct: 164 FKRQGFSYEGRASSLEDLRSLKGKHFLLDPLLPELLVFPAHTDLHEHPLYQAGHLILQDK 223
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A LAP PG V+DAC+APGNKT HLAAL+K +GKI A +L+++R+ + +
Sbjct: 224 ASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDEKRLASMATLLAR 283
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D Y +V+ ILLDPSCSGSG +L+ A
Sbjct: 284 AGVSCCELAEKDFLAVSPSDQRYRQVQYILLDPSCSGSGMLTRQLEE--------PGAGA 335
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+RL+ L+ FQ++AL HAL+FP + R+VYSTCS+ Q ENEDV++ L
Sbjct: 336 PSKKRLHALAGFQQRALCHALAFPSLRRLVYSTCSLCQEENEDVVQDAL 384
>gi|300797713|ref|NP_001178522.1| NOP2/Sun domain family, member 5 [Rattus norvegicus]
gi|149063048|gb|EDM13371.1| NOL1/NOP2/Sun domain family, member 5 (predicted) [Rattus
norvegicus]
Length = 451
Score = 185 bits (469), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 120/303 (39%), Positives = 167/303 (55%), Gaps = 28/303 (9%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELG 85
L H+ ++ LA+L V V EDL+ PR+VRVNTLK + A+
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLQERPGQAHQVPRFVRVNTLKTCPEDAIDYFK 153
Query: 86 KQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGKAS 126
+Q F Q + + DL L+ P DLH HPL G + LQ KAS
Sbjct: 154 RQGFSYQGRASSLEDLRTLKGQHFLLDPLLPELLVFPAQTDLHEHPLYRAGHLILQDKAS 213
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L+P PG V+DAC+APGNKT ++AAL+K +GKI A + + +R+ + + +G
Sbjct: 214 CLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLLARAG 273
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ EV DFL + P D Y +V+ ILLDPSCSGSG + +L+ H G P++
Sbjct: 274 VSCCEVAEKDFLTVSPSDQRYGQVQYILLDPSCSGSGMLSRQLEE----HGEG---TPSK 326
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATP 306
ERL L+ FQ++AL HAL FP ++R+VYSTCS+ Q ENEDV++ L S F+LA
Sbjct: 327 -ERLQALAGFQQRALCHALRFPSLQRLVYSTCSLCQEENEDVVQEALQ-QNSGTFRLAPV 384
Query: 307 FPN 309
P
Sbjct: 385 LPT 387
>gi|395332206|gb|EJF64585.1| S-adenosyl-L-methionine-dependent methyltransferase [Dichomitus
squalens LYAD-421 SS1]
Length = 474
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 160/301 (53%), Gaps = 24/301 (7%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ H+ + ++ ++ S +L PRYVRVN V A
Sbjct: 90 GPIKQAVLRHRTRLNGEFQRVKIKRGATSTAELAQTDDARAASIPRYVRVNQTCWTVADA 149
Query: 81 V-------------LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
+ L K F Q+D +P+L P + L +G + LQ KAS
Sbjct: 150 LETFHERGYQEGDPLSFPKAF--QQDQHIPNLFAFHPSVRFTENSLYTSGKIILQDKASC 207
Query: 128 MVAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
A L+P + V+DA SAPGNK HL A+M+ KGK+ A E +++R LK + +
Sbjct: 208 FPAHVLSPPAREDAVVIDATSAPGNKASHLCAIMQNKGKLYAFERDRKRFSTLKKMLAKA 267
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
N+E ++ DFL + P DP Y ILLDPSCSGSG R+DHLL + D
Sbjct: 268 HCNNVEAVNLDFLTVSPNDPKYGRATHILLDPSCSGSGI-VNRMDHLLDNEEE----DDG 322
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPI--AMSFGFQL 303
+ ERLNKL+AFQ K +RHA++FP V+R+VYSTCS+H VENE V++ L A+S F+L
Sbjct: 323 DSERLNKLAAFQLKMIRHAMAFPSVQRIVYSTCSVHAVENEHVVRQALKTEEAISGNFKL 382
Query: 304 A 304
A
Sbjct: 383 A 383
>gi|392594904|gb|EIW84228.1| williams-Beuren syndrome critical region protein 20 copy A
[Coniophora puteana RWD-64-598 SS2]
Length = 465
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 118/299 (39%), Positives = 158/299 (52%), Gaps = 17/299 (5%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK ++ ++ V+ V S L+ PRYVRVNT + A
Sbjct: 91 GPVKQAILRHKTRLRSEFQRIKVKRAVTSNLQLINAGDERAERIPRYVRVNTSLCSTEDA 150
Query: 81 VLELGKQ-FVV----------QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
V Q F V KD +PDLL P H +G + +Q KAS
Sbjct: 151 VEYFTSQGFRVADPLSDSKAFSKDGHIPDLLAFNPAFRFHDDSWYKSGKLIIQDKASCFP 210
Query: 130 AAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
A L P G +DA SAPGNKT HL+ALM+ +GKI A E +K R L + ++
Sbjct: 211 AYVLNPPLGDDRVAIDATSAPGNKTSHLSALMQNRGKIFAFERDKTRFTTLSKMLSIAKC 270
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+E + DFL +DP D Y++V IL+DPSCSGSG RLDHLL S T D E+
Sbjct: 271 ENVEPIRADFLTVDPMDSQYAQVTHILVDPSCSGSGI-VNRLDHLLESENKEET-DQNEL 328
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPI--AMSFGFQLA 304
+RL KLS+FQ ++HA+ FP +++VYSTCSIH ENE V++ L A GF LA
Sbjct: 329 DRLQKLSSFQLLMIKHAMKFPAAQKIVYSTCSIHAEENERVVQHALSSEEAKVAGFTLA 387
>gi|170099357|ref|XP_001880897.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644422|gb|EDR08672.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 471
Score = 184 bits (467), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 112/292 (38%), Positives = 160/292 (54%), Gaps = 25/292 (8%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK + L ++ ++ S +DL T ++P RY RVNT +D A
Sbjct: 90 GPIKQAVLRHKTRLHGELQKIKIKRGATSSQDLGLTSTTANIP--RYARVNTSLWSIDEA 147
Query: 81 V---LELGKQFV--------------VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
+ + G F+ QKD +P+LL P L P +G + LQ
Sbjct: 148 IKYFVSQGYSFINSFSSLNHLANSKGFQKDAHIPNLLAFSPNAALQDDPAYNSGKIILQD 207
Query: 124 KASSMVAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
KAS A L+P + V+DA +APGNKT HL+ALM KG + A E +++R LK
Sbjct: 208 KASCFPAVVLSPPSEDNSVVIDATAAPGNKTSHLSALMGNKGTLYAFERDRKRFSTLKMM 267
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
I + N+ ++ DFL +DP DP Y V ILLDPSCSGSG RLDHLL
Sbjct: 268 IGKAACKNVTPVNTDFLTVDPSDPKYLPVTHILLDPSCSGSGI-VNRLDHLLEGEPE--- 323
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
++ ++ ERL+KL+AFQ ++HA+ FP V+++VYSTCSIH ENE V++ L
Sbjct: 324 SEKSQHERLDKLAAFQLLMIKHAMRFPNVKKIVYSTCSIHASENEHVVRDAL 375
>gi|119590099|gb|EAW69693.1| hCG39703, isoform CRA_b [Homo sapiens]
Length = 308
Score = 184 bits (466), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 10/209 (4%)
Query: 85 GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS + A L P PG V+DA
Sbjct: 18 GKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDA 75
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
C+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G + E+ DFL + P D
Sbjct: 76 CAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSD 135
Query: 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 264
P Y EV ILLDPSCSGSG + +L+ T P RL+ L+ FQ++AL HA
Sbjct: 136 PRYHEVHYILLDPSCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQRALCHA 187
Query: 265 LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 188 LTFPSLQRLVYSTCSLCQEENEDVVRDAL 216
>gi|354477569|ref|XP_003500992.1| PREDICTED: putative methyltransferase NSUN5 [Cricetulus griseus]
Length = 415
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 114/289 (39%), Positives = 159/289 (55%), Gaps = 29/289 (10%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--VPKPRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ P PR+VRVNTLK + A+
Sbjct: 44 LLGRHQARLKAELARLKVHRGVSRNEDLLEERSRPGQAYQVPRFVRVNTLKTCPEDAIDY 103
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + DL L+ P DLH HPL G + LQ K
Sbjct: 104 FKRQGFSYQGRASSLEDLRTLKGQHFLLDPLLSELLVFPAQTDLHDHPLYRAGHLILQDK 163
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A L+P PG V+DAC+APGNKT ++AAL+K +GKI A + + +R+ + +
Sbjct: 164 ASCLPAMLLSPPPGSHVIDACAAPGNKTSYIAALLKNQGKIFAFDQDAKRLAAMATLLAR 223
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P D YS+V+ ILLDPSCSGSG + +L+ H
Sbjct: 224 AGVSCCELAEKDFLTVSPSDQRYSQVQYILLDPSCSGSGMLSRQLEE--------HGGGT 275
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL L+ FQ++AL HAL+FP + R+VYSTCS+ Q ENEDV++ L
Sbjct: 276 PSKERLQALAGFQQRALCHALTFPSLRRLVYSTCSLCQEENEDVVQVAL 324
>gi|390365596|ref|XP_787860.2| PREDICTED: putative methyltransferase NSUN5-like
[Strongylocentrotus purpuratus]
Length = 617
Score = 182 bits (461), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 115/327 (35%), Positives = 165/327 (50%), Gaps = 46/327 (14%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD-- 78
G K ++ K ++ L ++ + S+ DL+ +V PRY+RVN LK +D
Sbjct: 97 GKYRKAVVKQKKELKAELQKMKEKKGATSLSDLLPSQVKDEVSIPRYIRVNLLKTSIDDV 156
Query: 79 -SAVLELGKQFVVQKD-------DLVP--------------------------DLLILPP 104
+A +E G V+ +D D P D+L+
Sbjct: 157 IAAFIEAGYTCVMTRDEAEEEKQDATPKYISNLSVDVSRSLGQYEFATDLHLDDVLVFAA 216
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
D H HPL + G + L KAS A L+ KPG V+DACSAPGNKT H+A+L++ K
Sbjct: 217 RTDFHSHPLYLQGHIILMDKASCFPAYVLSAKPGSHVIDACSAPGNKTSHMASLLRNDAK 276
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I + +L+ +R+ + ++ +G + + +H DFL DP V ++DPSCSGSG
Sbjct: 277 IYSYDLDPKRISVMNTLLERAGVSAAKTIHQDFLTTDPCSKENMRVEYTIVDPSCSGSGM 336
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
A+ R D+L+ A RL L Q + L HALSFP V RVVYSTCS+H+ E
Sbjct: 337 AS-RKDYLVDDDMQEDRA------RLRSLHQLQCRILTHALSFPSVRRVVYSTCSVHREE 389
Query: 285 NEDVIKSVLPIAMSFGFQLATPFPNGT 311
NEDV+++VL S GF+L P GT
Sbjct: 390 NEDVVRTVLE--QSDGFRL-VPVMQGT 413
>gi|441649568|ref|XP_003282123.2| PREDICTED: putative methyltransferase NSUN5-like [Nomascus
leucogenys]
Length = 273
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 10/209 (4%)
Query: 85 GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS + A L P PG V+DA
Sbjct: 20 GKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPPPGSHVIDA 77
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
C+APGNKT HLAAL+K +GKI A +L+ +R+ + + +G + E+ DFL + P D
Sbjct: 78 CAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSD 137
Query: 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 264
P Y EV ILLDPSCSGSG +L+ P A RL+ L+ FQ++AL HA
Sbjct: 138 PRYREVHYILLDPSCSGSGMPNRQLEE--PGAGQPSPA------RLHALAGFQQRALCHA 189
Query: 265 LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 190 LTFPSLQRLVYSTCSLCQEENEDVVRDAL 218
>gi|301112627|ref|XP_002998084.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262112378|gb|EEY70430.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 490
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 125/324 (38%), Positives = 176/324 (54%), Gaps = 36/324 (11%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMA-LYQTPDVPKPRYVRVNT 72
R + G +K LM H+ + + ALA+L ++ KV S E L+ + + PRYVR+NT
Sbjct: 89 RQKIQGGGYVKKALMQHQTSFRAALARLKIKRKVASNEALLPPENRQQHLALPRYVRINT 148
Query: 73 LKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAA 132
L + A ++ ++D V DLL+LP G +LH H ++ +G + LQ KAS A
Sbjct: 149 LLASPEEAKA-FASEYDAKQDRDVRDLLVLPSGTELHEHEMVKSGKLVLQDKASCFPAYV 207
Query: 133 L------APKPGWKVLDACSAPGNKTVHLAALMK---GKGKIVAC--------ELNKERV 175
L A V+DAC+APGNKT HLA L++ G G+ C + + +R+
Sbjct: 208 LHGEHAEAQDNQGDVIDACAAPGNKTSHLAMLLQQQDGDGEDATCPKRRVFAFDRSPKRL 267
Query: 176 RRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL- 233
LK + L+GAA ++V FL++ D Y VR+ILLDPSCSGSG RLDHLL
Sbjct: 268 DLLKRRMTLAGAATRVQVELQSFLDVPVDDDMYRNVRSILLDPSCSGSGMT-NRLDHLLD 326
Query: 234 ----------PSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
P H + + D + RL L+ FQ +ALR A SFP V+RVVYSTCSI Q
Sbjct: 327 IASSHDTVLEPDHGAEYEEDTAK--RLQSLADFQLQALRKAFSFPQVKRVVYSTCSIFQK 384
Query: 284 ENEDVIKSVLPIAMSFGFQLATPF 307
E+E+V+ + L + G + PF
Sbjct: 385 EDEEVVAAALESEENSG--VTRPF 406
>gi|328768988|gb|EGF79033.1| hypothetical protein BATDEDRAFT_17142 [Batrachochytrium
dendrobatidis JAM81]
Length = 414
Score = 178 bits (452), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/313 (37%), Positives = 170/313 (54%), Gaps = 27/313 (8%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G + LM HK + L ++ V+ K K+ +DL+ + + PRYVR+NT+K +++
Sbjct: 89 GKYKDMLMRHKSRLNAELVKIKVKRKCKNNQDLIPEHIRNAIVLPRYVRINTIKTNMEQV 148
Query: 81 VLELGKQ-----------------FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
+ K+ + KD +P+LL+LPP DLH L++ G + LQ
Sbjct: 149 ISHFEKKGYRLDTIEKLNEPEYPAMCMIKDQHLPELLLLPPSTDLHEDKLLLQGHIVLQD 208
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
KAS A L+P G +DAC+APGNKT HL+A++ G I A + ++ R+ L+
Sbjct: 209 KASCFPAYILSPPKGSVCIDACAAPGNKTSHLSAILGNTGTIYAFDKDRARLDTLQRLTH 268
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRA------ILLDPSCSGSGTAAERLDHLLPS-- 235
+G NI G FL+ DP DP +S+ R +LLDPSCSGSG RLDHLL +
Sbjct: 269 QAGCKNILPQFGSFLDADPFDPMFSKARNAMFVEYVLLDPSCSGSGIVG-RLDHLLKNSK 327
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPI 295
A T +R N L+ FQKK + HA FP V+R+VYSTCS +++ENEDV++ L
Sbjct: 328 DAKADTQQEEIDDRANALADFQKKVILHAFKFPKVKRIVYSTCSRNRIENEDVVQYCLQE 387
Query: 296 AMSFGFQLATPFP 308
+F + FP
Sbjct: 388 NTNFSL-VENVFP 399
>gi|30109258|gb|AAH51209.1| Nsun5 protein, partial [Mus musculus]
Length = 286
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 129/199 (64%), Gaps = 8/199 (4%)
Query: 95 LVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVH 154
L+P+LL+ P DLH HPL G + LQ KAS + A L+P PG V+DAC+APGNKT +
Sbjct: 5 LLPELLVFPAQTDLHEHPLYRAGHLILQDKASCLPAMLLSPPPGSHVIDACAAPGNKTSY 64
Query: 155 LAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214
+AAL+K +GKI A + + +R+ + + +G + E+ DFL + P D YS+V+ IL
Sbjct: 65 IAALLKNQGKIFAFDQDAKRLAAMATLVARAGVSCCELAEKDFLTVSPSDQRYSQVQYIL 124
Query: 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVV 274
LDPSCSGSG + +L+ H G + ERL L+ FQ++AL HAL FP ++R+V
Sbjct: 125 LDPSCSGSGMLSRQLEE----HGEGTPSK----ERLQALAGFQQRALCHALRFPSLQRLV 176
Query: 275 YSTCSIHQVENEDVIKSVL 293
YSTCS+ Q ENEDV++ L
Sbjct: 177 YSTCSLCQEENEDVVQEAL 195
>gi|158253936|gb|AAI53973.1| Zgc:77183 protein [Danio rerio]
Length = 335
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 152/281 (54%), Gaps = 39/281 (13%)
Query: 65 PRYVRVNTLKMDVDSAVLEL---------------------GKQFVVQKDDLVPDLLILP 103
PRYVRVNTLK ++ + L GK F+ D + DLL+
Sbjct: 33 PRYVRVNTLKTSLEDVIDYLKREGFSYQGTPGRLEDLDRLSGKMFLC--DLHLKDLLVFS 90
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
D H H L G + LQGKAS + A L P G V+DAC+APGNKT HLAA+MK KG
Sbjct: 91 GKTDFHDHFLYKAGHIILQGKASCLPAFLLNPPVGSHVIDACAAPGNKTSHLAAIMKNKG 150
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
K+ A +L+ +R+ + + +G ++ + DFL +DP++ Y EV+ ILLDPSCSGSG
Sbjct: 151 KLFAFDLDAKRLSTMSTLLLRAGVTCHKLANQDFLKVDPQNSEYKEVKYILLDPSCSGSG 210
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
R D L + G RL L+AFQ L HAL FP +ER+VYSTCSIH
Sbjct: 211 MVCLR-DELPETQEDG---------RLQALAAFQLHCLNHALQFPQLERIVYSTCSIHSQ 260
Query: 284 ENEDVIKSVLPIAMSFGFQLATPFPN----GTAEASQFLKA 320
ENE+V+ + L + GF+L P+ G +Q L+A
Sbjct: 261 ENEEVVTACL--QRNPGFRLVHLLPDWPERGHEPLTQCLRA 299
>gi|302695663|ref|XP_003037510.1| hypothetical protein SCHCODRAFT_64939 [Schizophyllum commune H4-8]
gi|300111207|gb|EFJ02608.1| hypothetical protein SCHCODRAFT_64939 [Schizophyllum commune H4-8]
Length = 495
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 111/286 (38%), Positives = 152/286 (53%), Gaps = 18/286 (6%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK +Q ++ ++ K+ EDL + PRY RVNT VD A
Sbjct: 90 GPVKQAVLRHKTRLQGQWTKMKIKRGAKNNEDLAQVGDQRAALIPRYARVNTNLWSVDEA 149
Query: 81 VLEL---GKQFV--------VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
V L G + +D VP+LL+ P H +G + LQ KAS
Sbjct: 150 VKSLQASGSKLADPFASTSNFTQDAHVPELLLFSPKKAFHNDAAYKSGKLILQDKASCFP 209
Query: 130 AAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
L P K V+DA +APGNKT +L+ALM GK+ A E +K R + LK + +
Sbjct: 210 PLVLNPPASNKATVIDATAAPGNKTTYLSALMGNNGKLFAFERDKRRFQTLKTMVTKAAC 269
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+ ++ DFL +DP D YS V ILLDPSCSGSG RLD+LL + + D
Sbjct: 270 KNVLPVNADFLTIDPNDETYSGVTHILLDPSCSGSGI-VNRLDYLLETEEENDSQD---- 324
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL KL++FQ ++HA+ FP V R+VYSTCSIH ENE V++ L
Sbjct: 325 ERLAKLASFQLMMIKHAMKFPSVCRIVYSTCSIHAAENEHVVREAL 370
>gi|189241014|ref|XP_968918.2| PREDICTED: similar to williams-beuren syndrome critical region
protein [Tribolium castaneum]
Length = 840
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 110/275 (40%), Positives = 146/275 (53%), Gaps = 40/275 (14%)
Query: 61 DVPKPRYVRVNTLKMDVDSA--------------------------VLELG-KQFVVQKD 93
+V KPRYVRVNTLK+ V+ A V LG +F+V D
Sbjct: 213 EVEKPRYVRVNTLKITVNEAIEGFREEGWVLKRYTDSENYLGFLEAVSNLGSNEFMV--D 270
Query: 94 DLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTV 153
+P LLI PP + + H NG + LQ KAS + L P+PG +LD C+APG KT
Sbjct: 271 LHIPYLLIFPPKTEFYQHAAYKNGSIILQDKASCLPVHILDPQPGTSILDMCAAPGMKTT 330
Query: 154 HLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213
AAL+ GKI A E+ +R L+ ++ SGA+ +E ++ D L L + Y ++ I
Sbjct: 331 QCAALIDNIGKIYAVEIGTKRFHTLEKIVESSGASCVEPINSDVLQLTAQ--QYPDIDYI 388
Query: 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVER 272
L+DPSCSGSG L +G A ER+ +L+ FQ K LRHALS FP V+R
Sbjct: 389 LVDPSCSGSG--------LTYRVETGQQAQDQHTERIERLAGFQIKILRHALSKFPKVKR 440
Query: 273 VVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF 307
VVYSTCS++ ENEDV++ VL F A F
Sbjct: 441 VVYSTCSVYAEENEDVVRQVLETCNRFKLVPADQF 475
>gi|270013829|gb|EFA10277.1| hypothetical protein TcasGA2_TC012481 [Tribolium castaneum]
Length = 767
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 156/300 (52%), Gaps = 43/300 (14%)
Query: 36 LALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA--------------- 80
LA Q+L + +D+ + Q V KPRYVRVNTLK+ V+ A
Sbjct: 104 LAYEQVLKAHLSDVSDDVEEVEQ---VEKPRYVRVNTLKITVNEAIEGFREEGWVLKRYT 160
Query: 81 -----------VLELG-KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
V LG +F+V D +P LLI PP + + H NG + LQ KAS +
Sbjct: 161 DSENYLGFLEAVSNLGSNEFMV--DLHIPYLLIFPPKTEFYQHAAYKNGSIILQDKASCL 218
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
L P+PG +LD C+APG KT AAL+ GKI A E+ +R L+ ++ SGA+
Sbjct: 219 PVHILDPQPGTSILDMCAAPGMKTTQCAALIDNIGKIYAVEIGTKRFHTLEKIVESSGAS 278
Query: 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
+E ++ D L L + Y ++ IL+DPSCSGSG L +G A E
Sbjct: 279 CVEPINSDVLQLTAQ--QYPDIDYILVDPSCSGSG--------LTYRVETGQQAQDQHTE 328
Query: 249 RLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF 307
R+ +L+ FQ K LRHALS FP V+RVVYSTCS++ ENEDV++ VL F A F
Sbjct: 329 RIERLAGFQIKILRHALSKFPKVKRVVYSTCSVYAEENEDVVRQVLETCNRFKLVPADQF 388
>gi|321470952|gb|EFX81926.1| hypothetical protein DAPPUDRAFT_317133 [Daphnia pulex]
Length = 449
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 112/290 (38%), Positives = 159/290 (54%), Gaps = 38/290 (13%)
Query: 45 NKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL--------------GKQFVV 90
+ +KS E+ +++Q + PRYVRVNTL + +L G + +
Sbjct: 126 DSMKSQEENDSVHQ---ISAPRYVRVNTLVSTTEKVCTKLIAEGWKQVKSKKKTGYEGFI 182
Query: 91 QK------DDLVPD-----LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
++ ++ + D LL+ P H H L+ NG + LQ KAS + A AL KP +
Sbjct: 183 ERVKSLSENEFIMDFHLDFLLVFPSSAQFHNHDLLRNGSILLQDKASCLSAVALQTKPFY 242
Query: 140 -KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198
K++DACSAPG KT LAAL + I+A E + +R L+ T+ + A+ + V DFL
Sbjct: 243 GKMIDACSAPGMKTSLLAALSNNQSSIIAIERDAKRCNTLRQTVSNARASKVSVQRADFL 302
Query: 199 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQK 258
NLDP D Y +V+ IL+DPSCSG+G RLD P A E+ RL +LS+ Q
Sbjct: 303 NLDPSD--YQDVKYILVDPSCSGTGI-VNRLD---PKRKQEEGAS-LEL-RLKRLSSLQS 354
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP-IAMSFGFQLATPF 307
+ + HA +FP VER+VYSTCSIH+ ENE V++ VL I SF A P+
Sbjct: 355 RLVEHAATFPSVERIVYSTCSIHEEENEAVVRQVLSKIGNSFRLDEALPW 404
>gi|296472402|tpg|DAA14517.1| TPA: NOL1/NOP2/Sun domain family, member 5-like [Bos taurus]
Length = 368
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 8/193 (4%)
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK 160
+ P DLH HPL G + LQ KAS + A LAP PG V+DAC+APGNKT HLAAL+K
Sbjct: 96 VFPAQTDLHDHPLYQAGHLILQDKASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLK 155
Query: 161 GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCS 220
+GKI A + + +R+ + + +G + E+ DFL + P D Y +V+ ILLDPSCS
Sbjct: 156 NQGKIFAFDQDAKRLASMATLLARAGVSCCELAEQDFLAVSPSDQRYCQVQYILLDPSCS 215
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSI 280
GSG + +L+ T P ERL L+AFQ++AL HAL+FP + R+VYSTCS+
Sbjct: 216 GSGMPSRQLE-----EPKSCTPSP---ERLRALAAFQQRALSHALTFPALRRLVYSTCSV 267
Query: 281 HQVENEDVIKSVL 293
Q ENEDV+++ L
Sbjct: 268 CQEENEDVVRAAL 280
>gi|340722018|ref|XP_003399409.1| PREDICTED: putative methyltransferase NSUN5-like [Bombus
terrestris]
Length = 577
Score = 172 bits (437), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 108/275 (39%), Positives = 154/275 (56%), Gaps = 36/275 (13%)
Query: 44 RNKVKSIEDLMALYQT-PDVPKPRYVRVNTLKMDVDSAV---LELGKQFV---------- 89
R ++ +I D+ AL ++ V K RYVR+NTL + ++ + E G F+
Sbjct: 114 REELSNISDIDALQKSHKTVKKARYVRINTLLVSLEKGISYFQEEGWSFMPKCLSYVEHL 173
Query: 90 -----VQKDDLVPD-----LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
++K + + D LLI PP H HP NG + LQ KAS + + L P+PG
Sbjct: 174 NVIKNLKKPNFIQDFHISELLIFPPDTTFHDHPGYQNGEILLQDKASCLPSQLLNPEPGS 233
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199
VLD C+APG K+ HLAA+M KGKI A E+++ R L + ++++ A +E ++ D L
Sbjct: 234 TVLDLCAAPGMKSSHLAAIMGNKGKIYAVEIDERRYETLCEQVRITNATCVETVNKDALI 293
Query: 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
L+P + Y V IL+DP+CSGSG ++ H DP +RL +L AFQ
Sbjct: 294 LNPNE--YPNVEYILVDPTCSGSGMLDRQIVH------GNEKCDP---QRLKQLQAFQVF 342
Query: 260 ALRHA-LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
LRHA L+FP V+R+VYSTCSIH ENE VI +L
Sbjct: 343 ILRHALLNFPNVKRIVYSTCSIHPEENEQVIDEIL 377
>gi|358419347|ref|XP_593209.4| PREDICTED: putative methyltransferase NSUN5 [Bos taurus]
gi|359080487|ref|XP_002698734.2| PREDICTED: putative methyltransferase NSUN5 [Bos taurus]
Length = 395
Score = 171 bits (434), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 91/193 (47%), Positives = 123/193 (63%), Gaps = 8/193 (4%)
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK 160
+ P DLH HPL G + LQ KAS + A LAP PG V+DAC+APGNKT HLAAL+K
Sbjct: 123 VFPAQTDLHDHPLYQAGHLILQDKASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALLK 182
Query: 161 GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCS 220
+GKI A + + +R+ + + +G + E+ DFL + P D Y +V+ ILLDPSCS
Sbjct: 183 NQGKIFAFDQDAKRLASMATLLARAGVSCCELAEQDFLAVSPSDQRYCQVQYILLDPSCS 242
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSI 280
GSG + +L+ T P ERL L+AFQ++AL HAL+FP + R+VYSTCS+
Sbjct: 243 GSGMPSRQLE-----EPKSCTPSP---ERLRALAAFQQRALSHALTFPALRRLVYSTCSV 294
Query: 281 HQVENEDVIKSVL 293
Q ENEDV+++ L
Sbjct: 295 CQEENEDVVRAAL 307
>gi|348680714|gb|EGZ20530.1| hypothetical protein PHYSODRAFT_345492 [Phytophthora sojae]
Length = 542
Score = 170 bits (431), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 120/308 (38%), Positives = 169/308 (54%), Gaps = 30/308 (9%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMA-LYQTPDVPKPRYVRVNT 72
R + G +K L+ H+ A + ALA+ ++ KV S E L+ + + PRYVRVNT
Sbjct: 89 RQKIQGGGYVKKALVQHQTAFRAALARFKIKRKVASNEALLPPENRQQHLALPRYVRVNT 148
Query: 73 LKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAA 132
L + A +++ ++D V DLL+LP G +LH H ++ +G + LQ KAS A
Sbjct: 149 LLASPEEAEA-FTREYDAKQDRDVRDLLVLPSGTELHEHEMVKSGKLVLQDKASCFPAFV 207
Query: 133 L------APKPGWKVLDACSAPGNKTVHLAALMK---GKGK--------IVACELNKERV 175
L A V+DAC+APGNKT HLA L++ G G+ + A + + +R+
Sbjct: 208 LHGEHADAEDKQGDVIDACAAPGNKTSHLAMLLQQQDGDGEDGAEPKRHVFAFDRSPKRL 267
Query: 176 RRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
LK ++L+GAA ++ FL + Y VR+ILLDPSCSGSG RLDHLL
Sbjct: 268 ELLKRRMQLAGAATRVQAELMSFLEVPVDGEKYRNVRSILLDPSCSGSGMT-NRLDHLLD 326
Query: 235 SHASGHT---------ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+S T + +RL L+ FQ +ALR A SFP VERVVYSTCSI Q E+
Sbjct: 327 IASSRDTVLEPEEGAEYEEDTAKRLQSLADFQLEALRKAFSFPQVERVVYSTCSIFQKED 386
Query: 286 EDVIKSVL 293
E+V+ + L
Sbjct: 387 EEVVAAAL 394
>gi|291236130|ref|XP_002738014.1| PREDICTED: NOL1/NOP2/Sun domain family, member 5-like [Saccoglossus
kowalevskii]
Length = 697
Score = 170 bits (430), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/221 (42%), Positives = 130/221 (58%), Gaps = 10/221 (4%)
Query: 86 KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDAC 145
KQF+ KD DLL+ P DLH + L G + LQ KAS + A L P G V+D C
Sbjct: 364 KQFM--KDLHFDDLLVFAPNTDLHDNVLYQQGDIILQDKASCIPAHVLCPPLGSHVIDTC 421
Query: 146 SAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205
+APGNKT HLA+++ GKI A +L+ +R+ + + +G N ++ + DFL +P D
Sbjct: 422 AAPGNKTSHLASIINNTGKIYAFDLDTKRIGTMGNLTAKAGVMNTQLFNQDFLKTNPTDN 481
Query: 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 265
+ +V IL+DPSC+GSG R DHL+ A G T RL LS+FQ L+HA+
Sbjct: 482 KFQKVEYILVDPSCTGSGI-VNRNDHLMG--AQGITK-----ARLRSLSSFQVMILKHAM 533
Query: 266 SFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATP 306
FP ++RVVYSTCS+H+ ENEDV+ VL +F + P
Sbjct: 534 EFPNLKRVVYSTCSVHREENEDVVAEVLKCNKNFALKTVMP 574
>gi|428172588|gb|EKX41496.1| hypothetical protein GUITHDRAFT_112468 [Guillardia theta CCMP2712]
Length = 356
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 109/279 (39%), Positives = 151/279 (54%), Gaps = 31/279 (11%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G+A + + H+ + AL + L + +KS++DL +Y+RVN L+ +
Sbjct: 87 GEASRLVKGHREGLVKALGRQLEKRGIKSVDDLSRESAHRPSHNLKYLRVNVLRTTMAEV 146
Query: 81 V-------------------LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
V L + K V D DLL+L D H L+ + V +
Sbjct: 147 VEGLLADSWEQLSHQEFMQTLSMNKSKVFCLDPDFDDLLMLRSTSDFHKSQLVGDHFVRI 206
Query: 122 QGKASSMVAAALAPKPGWK-VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q KAS M A + + LDAC+APGNKT HL+ALM +GKIVA ++N++RV+ L++
Sbjct: 207 QEKASCMPARVMMEDNDIEFALDACAAPGNKTTHLSALMGNRGKIVALDINQDRVKLLQE 266
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA--ERLDHLLPSHAS 238
T++ GA+NI V+ DFL++ K +S V+ ILLDPSCSGSG ER+D
Sbjct: 267 TVEKMGASNITVMKKDFLSVSAKVKPFSHVQGILLDPSCSGSGIVGREERMD-------- 318
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYST 277
+ E ERL +L AFQKKAL HALSFP V RVVYST
Sbjct: 319 -AKSKEKEEERLQRLCAFQKKALLHALSFPNVRRVVYST 356
>gi|403412103|emb|CCL98803.1| predicted protein [Fibroporia radiculosa]
Length = 472
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 104/286 (36%), Positives = 152/286 (53%), Gaps = 25/286 (8%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ + HK + L ++ ++ KS +L + PRYVRVNT + A
Sbjct: 90 GPVKQAVFRHKTRLNSELQRIKIKRGAKSNGELAQGEDSRAALIPRYVRVNTAYCTTNEA 149
Query: 81 V-------LELGKQFVVQ----KDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
+ EL F + KD+ +PDLL P PL +G + LQ KAS
Sbjct: 150 IEDFISRGFELSAPFASKQGFAKDEHIPDLLAFNPRVSFETDPLYTSGKIILQDKASCFP 209
Query: 130 AAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
A L+P + V+DA +APGNKT HL ALMK +G++ A E +++R LK + +
Sbjct: 210 AYILSPPSTDESVVIDATAAPGNKTSHLCALMKNRGRLFAFERDRKRFSTLKMMLGKAQC 269
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+E ++ DFL + P+D Y+ V I GSG RLD+LL + + E
Sbjct: 270 QNVEPVNADFLTISPQDKTYAAVTHI-------GSGIV-NRLDYLLDTE----NENDGEQ 317
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERLNKL+AFQ ++HA+ FP VE++VYSTCS+H +ENE V++ L
Sbjct: 318 ERLNKLAAFQLSMIKHAMKFPSVEKIVYSTCSVHAIENEQVVRQAL 363
>gi|340374457|ref|XP_003385754.1| PREDICTED: putative methyltransferase NSUN5-like [Amphimedon
queenslandica]
Length = 396
Score = 169 bits (428), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 107/268 (39%), Positives = 150/268 (55%), Gaps = 35/268 (13%)
Query: 65 PRYVRVNTLK----MDVDSAVLELG---------KQFVVQ--------KDDLVPDLLILP 103
PRYVR+N LK +++ + +++LG QF+++ KDDL+PDL +LP
Sbjct: 108 PRYVRLNALKCASPVELTNELVKLGLKEVPFNKDIQFILKDKGNDWYFKDDLIPDLYVLP 167
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
L L +G + LQ K+S + + L+P PG V+DAC+APG+KT H+AA MK G
Sbjct: 168 YSVKLTNTSLYTSGKIILQDKSSCIASYVLSPPPGASVIDACAAPGSKTSHIAAAMKNTG 227
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
I A + +K+R +K ++ + V + DFL + P+D YS V+ IL+DPSCSGSG
Sbjct: 228 SIHAFDRDKKRCDAMKALLRKYNVTCVTVSNMDFLKVCPED--YSNVQYILVDPSCSGSG 285
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
+ H + P +RL LS FQ L+HALSFP V+RVVYSTCSIH
Sbjct: 286 IIRRQEIH--------SSVSP---QRLTSLSRFQSMILKHALSFPSVKRVVYSTCSIHPE 334
Query: 284 ENEDVIKSVLPIAMSFGFQLATPFPNGT 311
ENE V+ L A F+L P+ T
Sbjct: 335 ENEGVVSEALS-AHKDQFKLVHILPDWT 361
>gi|449691112|ref|XP_004212566.1| PREDICTED: putative methyltransferase NSUN5-like, partial [Hydra
magnipapillata]
Length = 349
Score = 168 bits (425), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/240 (40%), Positives = 136/240 (56%), Gaps = 12/240 (5%)
Query: 86 KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDAC 145
+F V KD +PDLL+ D H + + +NG + LQ KAS + A L P G ++DAC
Sbjct: 8 NEFCVDKD--IPDLLVFESRTDFHKNLMYINGEILLQDKASCLPAFILNPPMGSMIIDAC 65
Query: 146 SAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205
+APGNK+ HLA++ + K I + +L+ R++ ++ +K S +++ H DFL + P
Sbjct: 66 AAPGNKSSHLASITRNKSHIFSFDLDFNRLKLMQKLLKKSACTSVKTKHQDFLKVQHCHP 125
Query: 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 265
YS+V ILLDPSCSGSG + R+D L + S T D RL LS FQ AL HAL
Sbjct: 126 LYSKVEYILLDPSCSGSGIVS-RMDEFLDNEESAFTND----SRLKALSGFQTAALSHAL 180
Query: 266 SFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN----GTAEASQFLKAL 321
FP V++VVYSTCS+H+ ENEDV++ F L FP G E Q K +
Sbjct: 181 QFPNVKKVVYSTCSVHKEENEDVVEKAYN-RFKETFHLCHAFPEWSNRGLGEWEQAYKCI 239
>gi|330804693|ref|XP_003290326.1| hypothetical protein DICPUDRAFT_6820 [Dictyostelium purpureum]
gi|325079536|gb|EGC33131.1| hypothetical protein DICPUDRAFT_6820 [Dictyostelium purpureum]
Length = 443
Score = 167 bits (423), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 110/310 (35%), Positives = 163/310 (52%), Gaps = 52/310 (16%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK--MDVD 78
G A+K L+ ++ I ALA+L ++ + K DL+ + + PRYVRVNTL+ V
Sbjct: 93 GHAKKTLLQYQTQINSALARLKIQKRCKENIDLLPDHIRYPITLPRYVRVNTLQGVNAVQ 152
Query: 79 SAVLE--------------LGKQFVVQKDDLV----------------PD---LLILPPG 105
A+ + L K+ + ++D V PD +L+
Sbjct: 153 EAIDQFKSEGYEMLAQQPPLTKKLIKKEDGTVEEQSNIILGEKEFYQDPDFKEILVFHHS 212
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
DLH H ++ NG + LQ KAS + + L+P G +D+CSAPGNKT L+A M GK+
Sbjct: 213 IDLHDHKMLENGHIILQDKASCLPSFILSPPKGSVCIDSCSAPGNKTSLLSAQMGNTGKV 272
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT- 224
A E +++R L K S NIE ++ FLNL DP + +V IL DPSCSGSG
Sbjct: 273 YAIEKDQKRCGTLIKLTKRSLCKNIEAINDSFLNLKHDDPKFKDVEYILCDPSCSGSGIL 332
Query: 225 -AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
+ E+L+ E +R+ L+ FQ ++HA +FP V++V+YSTCS+HQV
Sbjct: 333 DSEEKLE---------------EEKRVKLLADFQLSIIQHAFAFPNVKKVIYSTCSVHQV 377
Query: 284 ENEDVIKSVL 293
ENEDV++ +
Sbjct: 378 ENEDVVERAI 387
>gi|324513565|gb|ADY45571.1| Methyltransferase [Ascaris suum]
Length = 438
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/242 (38%), Positives = 136/242 (56%), Gaps = 32/242 (13%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPD------------------------L 99
PRY RVNT+K + A+ L ++ ++V++ D V D L
Sbjct: 134 PRYARVNTIKWTFEDALKALKEEEWIVKEMDDVTDGSTYRAYVENMEWNEVYVDPHIENL 193
Query: 100 LILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM 159
LI DLH + ++V+G V LQ KAS + A L PKPG +V D C+APG KT H+AAL+
Sbjct: 194 LIFRGDADLHSYWMVVDGYVLLQDKASCLSALLLKPKPGCEVFDVCAAPGMKTSHIAALL 253
Query: 160 KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219
G+GK+ A + + ERV L+ ++ +G +N+ + GDFL +D D +++VR L+DP C
Sbjct: 254 SGRGKVWAMDKSAERVETLRAMLQNAGVSNVSIFCGDFLRVDVFDKKFAKVRYALVDPPC 313
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCS 279
SGSG +RLD + A+ + RL LS Q L+HA+ P + R+VYSTCS
Sbjct: 314 SGSGI-VKRLDKFIDD------ANGVDERRLQALSNLQAMILKHAMKLPNLRRLVYSTCS 366
Query: 280 IH 281
IH
Sbjct: 367 IH 368
>gi|213408467|ref|XP_002175004.1| NOL1/NOP2/Sun domain family member 5B [Schizosaccharomyces
japonicus yFS275]
gi|212003051|gb|EEB08711.1| NOL1/NOP2/Sun domain family member 5B [Schizosaccharomyces
japonicus yFS275]
Length = 465
Score = 165 bits (418), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 104/242 (42%), Positives = 134/242 (55%), Gaps = 20/242 (8%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFV----------VQKDDLVPDLLILPPGCDLHVHPLI 114
PR+VRVNT+ + + + LG + V V DD V +LL L + L
Sbjct: 131 PRWVRVNTILSNKEEVIKGLGVEPVDSIDALVPGKVYFDDCVENLLALESNISFVGNELY 190
Query: 115 VNGCVFLQGKASSMVAAAL--APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
G + +Q KAS AA L P P ++D C+APGNKT HLAAL KI A E +
Sbjct: 191 EKGKIIIQDKASCFPAAVLHGMPGPVGDIIDGCAAPGNKTTHLAALYPN-AKIFAFERDA 249
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
RV+ L+ +++SGA N+E+ H DF + D D Y+ V ILLDPSCSGSG + R D L
Sbjct: 250 YRVKTLQKMVRISGAKNVEIQHMDFTHTDVHDEKYANVTHILLDPSCSGSGIVS-RQDFL 308
Query: 233 LPSHASGHTADPT-EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKS 291
L + DP E +R LS FQ L+HALSFP V V YSTCS+H+ ENE V+
Sbjct: 309 LVNE-----QDPVDEGDRKENLSKFQSTILKHALSFPNVRNVTYSTCSVHREENEQVVDE 363
Query: 292 VL 293
VL
Sbjct: 364 VL 365
>gi|429243286|ref|NP_594509.3| rRNA methyltransferase (predicted) [Schizosaccharomyces pombe
972h-]
gi|384872672|sp|O14039.3|YEY6_SCHPO RecName: Full=Putative methyltransferase C2C4.06c
gi|347834193|emb|CAB16366.3| rRNA methyltransferase (predicted) [Schizosaccharomyces pombe]
Length = 460
Score = 165 bits (418), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 140/247 (56%), Gaps = 24/247 (9%)
Query: 62 VPKPRYVRVNTLK-----------MDVDSAVLELG-KQFVVQKDDLVPDLLILPPGCDLH 109
V PR++R+NT+K +D S++ ELG +F + DD V +L+ + P +
Sbjct: 128 VSLPRWLRINTIKSTKDEVLQGLGLDKVSSIEELGPDKFYI--DDCVENLIAIDPSFPIV 185
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPG--WKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ L G V +Q KAS AA LA G ++D C+APGNKT HLAA K I A
Sbjct: 186 ENSLYKEGKVIIQDKASCFPAAVLAGLTGHVGDIIDGCAAPGNKTTHLAACFP-KSHIFA 244
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
E + +RV+ L+ + +SGA N+ + H DF DPK Y V ILLDPSCSGSG +
Sbjct: 245 FERDAKRVQTLRKMVGISGANNVTIEHQDFTLTDPKSDLYRNVTHILLDPSCSGSGIVS- 303
Query: 228 RLDHLLPSHASGHTADPTE-MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
R D+LL G+ D TE ERL L +FQ L+HAL FP V YSTCS+H++ENE
Sbjct: 304 RQDYLL-----GNEQDVTEDTERLENLCSFQSTILKHALQFPNCRHVTYSTCSVHRLENE 358
Query: 287 DVIKSVL 293
V+ VL
Sbjct: 359 QVVCEVL 365
>gi|345481892|ref|XP_001605827.2| PREDICTED: putative methyltransferase NSUN5-like [Nasonia
vitripennis]
Length = 738
Score = 164 bits (416), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 103/273 (37%), Positives = 139/273 (50%), Gaps = 45/273 (16%)
Query: 55 ALYQTPD----------VPKPRYVRVNTLKMDVDSA------------------------ 80
AL Q PD V PRYVRVNTL +D A
Sbjct: 120 ALVQNPDAAVDPCDKKKVKLPRYVRVNTLLTSIDEALSAFAEDGWRLLPRCYSYTSHLKT 179
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
+ +G +Q D +P++LI PPG H HP ++G + LQ KAS + A L PKP +
Sbjct: 180 ISNMGYDNFIQ-DFHIPEVLIFPPGTKFHDHPGYLSGKLLLQDKASCLPAFLLNPKPNSE 238
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
V+D CSAPG KT HLAA++ +GKI A E+ R R L D + + A+ +E + D L +
Sbjct: 239 VMDMCSAPGMKTTHLAAVINNEGKIYAIEMKDTRYRTLCDFVTNANASCVETIQADALTI 298
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
P+ Y + IL+DPSCSGSG +R++ + + RL KL + Q
Sbjct: 299 SPE--FYPNIEYILVDPSCSGSG-MVDRIEIRKEDQNNLYN-------RLGKLQSLQSMI 348
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L HAL FP +RVVYSTCSI+ ENE V+ +
Sbjct: 349 LNHALKFPNAKRVVYSTCSIYPEENECVVDEAM 381
>gi|384488576|gb|EIE80756.1| hypothetical protein RO3G_05461 [Rhizopus delemar RA 99-880]
Length = 282
Score = 164 bits (415), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 89/200 (44%), Positives = 116/200 (58%), Gaps = 19/200 (9%)
Query: 99 LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAAL 158
+L+ D H H L +G + LQ KAS A P G +DAC+APGNKT HL+AL
Sbjct: 1 MLVFHQRTDFHDHALYKSGQIILQDKASCFPAHVCHPPEGVHAIDACAAPGNKTSHLSAL 60
Query: 159 MKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218
MK GKI A +L+ R+ +I +HG FL DP DP Y++V +LLDPS
Sbjct: 61 MKNTGKIWAFDLDSRRL-------------DINPIHGSFLETDPNDPQYAQVEYLLLDPS 107
Query: 219 CSGSGTAAERLDHLLPSH-----ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV 273
CSGSG + RLDHL+ + S + T+ ERL LS FQ + HA+ FP +R+
Sbjct: 108 CSGSGIIS-RLDHLVDDNDTENDTSDQKNEQTQEERLKNLSEFQISIIEHAMKFPKAKRI 166
Query: 274 VYSTCSIHQVENEDVIKSVL 293
VYSTCSIH ENE V+K++L
Sbjct: 167 VYSTCSIHAEENEHVVKAIL 186
>gi|328786980|ref|XP_393743.4| PREDICTED: putative methyltransferase NSUN5-like [Apis mellifera]
Length = 607
Score = 162 bits (409), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 104/265 (39%), Positives = 145/265 (54%), Gaps = 38/265 (14%)
Query: 55 ALYQTPD-VPKPRYVRVNTLKMDVD------------------------SAVLELGKQFV 89
A +P+ V RYVR+NTL + + +AV L K
Sbjct: 124 AFSTSPETVKNARYVRINTLLVTLKKGISYFQEEGWSLIPKCSNYIQHLNAVKNLKKPNF 183
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
+Q D +P++L+ PP + HP NG + LQ KAS + + L P+PG VLD C+APG
Sbjct: 184 IQ-DFHIPEILVFPPDTVFYDHPGYQNGEIILQDKASCLPSYLLNPEPGSIVLDMCAAPG 242
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
KT HLAA++ GKI A E ++ R + L IKL+ A+ +E ++ D L L+ + YS+
Sbjct: 243 MKTSHLAAILTNTGKIYAVEKDEHRYKTLCKQIKLTNASCVETINKDSLTLETNE--YSK 300
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA-LSFP 268
V IL+DPSCSGSG ++ + DP +RL +L AFQ LRHA L+FP
Sbjct: 301 VEYILVDPSCSGSGMLDRQIVY------GKEKGDP---QRLKQLQAFQVFVLRHALLNFP 351
Query: 269 GVERVVYSTCSIHQVENEDVIKSVL 293
V+RVVYSTCS H ENE+V+ +L
Sbjct: 352 NVKRVVYSTCSTHCEENEEVVDEIL 376
>gi|395842998|ref|XP_003794291.1| PREDICTED: putative methyltransferase NSUN5 [Otolemur garnettii]
Length = 437
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 113/289 (39%), Positives = 151/289 (52%), Gaps = 45/289 (15%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMAL-YQTPDVPK-PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V V EDL+ + ++ V + PR+VRVNTLK D V
Sbjct: 94 LLGRHQARLKAELARLKVHRGVSRNEDLLDVGTKSESVSQVPRFVRVNTLKTCSDDVVDY 153
Query: 84 LGKQ-FVVQK-----DDL-------------VPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q DDL +P+LL+ P DLH HPL G LQ K
Sbjct: 154 FKRQGFSYQGRASSLDDLRALKGKHFLLDPLLPELLVFPAQTDLHEHPLYRAGHFILQDK 213
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A LAP PG V+DAC+APGNKT HLAALMK +GKI A +L+ +R+ + +
Sbjct: 214 ASCLPAMLLAPPPGSHVIDACAAPGNKTSHLAALMKNQGKIFAFDLDAKRLAFMATLLAR 273
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P DP Y +V ILLDPSCSGSG +L+ A
Sbjct: 274 AGVSCCELAEKDFLAVSPSDPRYRQVHYILLDPSCSGSGMLTRQLEE--------PGAGT 325
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ER FP ++R+VYSTCS+ Q ENE+V++ L
Sbjct: 326 PSKERF----------------FPSLQRLVYSTCSLCQEENEEVVRDAL 358
>gi|440790310|gb|ELR11593.1| NOL1/NOP2/sun domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 542
Score = 160 bits (405), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 90/212 (42%), Positives = 122/212 (57%), Gaps = 21/212 (9%)
Query: 90 VQKDDLVPDLLILPPGCDLH-VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAP 148
++ D+ + DLL+LPP ++ HPL+ +G + LQ KAS A AL+P V+D C+AP
Sbjct: 223 IKVDEHLADLLVLPPTVKMNGRHPLVQDGTLVLQDKASCFSAHALSPPEHAHVIDCCAAP 282
Query: 149 GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS 208
GNKT HLAALMK GKI A +++ R+ LK +GA NI + DFL ++P DP Y+
Sbjct: 283 GNKTSHLAALMKNTGKIFAFDMDLYRLNTLKRLTARAGATNITAVCSDFLKVNPHDPQYA 342
Query: 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME------------RLNKLSAF 256
V + DPSCSGSG ++ + T P E E RL L+AF
Sbjct: 343 NVEYFMADPSCSGSG--------IVTRYDVAFTTAPDEDEWVDLGDDDEKKKRLAGLAAF 394
Query: 257 QKKALRHALSFPGVERVVYSTCSIHQVENEDV 288
Q + H L FP V++VVYSTCS+H+ ENE V
Sbjct: 395 QTSIITHCLKFPRVKKVVYSTCSVHEEENERV 426
>gi|409048593|gb|EKM58071.1| hypothetical protein PHACADRAFT_139688 [Phanerochaete carnosa
HHB-10118-sp]
Length = 517
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 111/321 (34%), Positives = 155/321 (48%), Gaps = 49/321 (15%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK + L ++ +R +S ++L PRYVRVNT + A
Sbjct: 90 GPVKQAILRHKTRLNSELQRIKIRRGARSTKELARAADVRAERIPRYVRVNTTCWSTEEA 149
Query: 81 V---LELGKQFV-------------------VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
V + G Q KD+ + DLL+ PP L L G
Sbjct: 150 VKTFISRGYQLSGPFEEKYAAACASRLNISGFAKDEHICDLLLFPPDTQLSDDSLYREGK 209
Query: 119 VFLQGKASSMVAAALAPKPGWK--VLDACSAPGNKTVHLAALMKGKGK-------IVACE 169
+ LQ KAS + LAP + V+DA +APGNKT HL ALM +GK + A E
Sbjct: 210 IILQDKASCFPSYILAPPTQDRAVVIDATAAPGNKTSHLCALMNNQGKASPIRFCLFAFE 269
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+++R LK + + NIE ++ DF+ P D ++ V ILLDPSCSGSG RL
Sbjct: 270 RDRKRFGTLKTMLSRARCQNIEAVNADFMTTSPNDGRFASVTHILLDPSCSGSGIV-NRL 328
Query: 230 DHLLPSHASGH---TADP--------------TEMERLNKLSAFQKKALRHALSFPGVER 272
D+LL S + + P ERL KL++FQ +RHA+ FP V+R
Sbjct: 329 DYLLESGLHSYPQWSCTPPCTLTNLIEAENPEENEERLQKLASFQLLMIRHAMKFPSVQR 388
Query: 273 VVYSTCSIHQVENEDVIKSVL 293
VVYSTCS+H ENE V++ L
Sbjct: 389 VVYSTCSVHAAENEHVVREAL 409
>gi|403176782|ref|XP_003335399.2| hypothetical protein PGTG_17252 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375172394|gb|EFP90980.2| hypothetical protein PGTG_17252 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 582
Score = 159 bits (403), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 162/313 (51%), Gaps = 44/313 (14%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT-----------PDVPKPRYVRVNTLKMDVD 78
H A++ L++L+VR V + DL +Q ++ PR++RVNT+K VD
Sbjct: 146 HSSALKAELSRLMVRQAVSRVSDLADSFQRGTDSVDEDSGGTNLNSPRWMRVNTIKWSVD 205
Query: 79 SA---VLELG-------------------KQFVVQKDDLVPDLLILPPGCDLHVHPLIVN 116
A ++ G + V +D+ V LL LP L V+
Sbjct: 206 QAKGWFIDAGWTQVSSLEALPNQTSDSPDQLLVFAEDEHVAGLLALPSAVVLAKLAPYVD 265
Query: 117 GCVFLQGKASSMVAAALAP----KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
G + Q KAS M A L P +V+DA +APGNKT L++++ +GK+ A E +K
Sbjct: 266 GRLIAQDKASCMPAQLLLGDHPHNPPIEVIDATAAPGNKTTMLSSIVGPRGKVWAFEKDK 325
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
+R + L + IKL+G N+ ++GDFL ++ D + +V IL+DPSCSGSG + RLDHL
Sbjct: 326 QRFQVLTEMIKLAGCTNVRCINGDFLAVNHDDERFKDVSCILVDPSCSGSGI-SNRLDHL 384
Query: 233 LPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292
+ + + R+ LS FQ + HAL FP V +V YSTCSI + ENE+V+ +
Sbjct: 385 ----SQTDSQKKRDENRIQSLSRFQTTIVSHALRFPSVHQVAYSTCSIWKEENEEVVFRI 440
Query: 293 L--PIAMSFGFQL 303
L P + G+ L
Sbjct: 441 LNKPEMIDKGWSL 453
>gi|380016032|ref|XP_003691997.1| PREDICTED: putative methyltransferase NSUN5-like [Apis florea]
Length = 553
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 102/257 (39%), Positives = 139/257 (54%), Gaps = 37/257 (14%)
Query: 62 VPKPRYVRVNTLKMDVDSA------------------------VLELGKQFVVQKDDLVP 97
V RYVR+NTL + + V L K +Q D +
Sbjct: 132 VKNARYVRINTLLVTLKKGISYFQEEGWSLLPKCSNYIQHLNIVKNLKKPNFIQ-DFHIS 190
Query: 98 DLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAA 157
++L+ PP + HP NG + LQ KAS + + L P+PG VLD C+APG KT HLAA
Sbjct: 191 EILVFPPDTIFYDHPGYQNGEIILQDKASCLPSYLLNPEPGSIVLDMCAAPGMKTSHLAA 250
Query: 158 LMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217
L+ GKI A E ++ R + L + IKL+ A+ +E ++ D L L+ + YS+V IL+DP
Sbjct: 251 LLTNTGKIYAVEKDEHRYKTLCEQIKLTNASCVETINKDSLTLEANE--YSKVEYILVDP 308
Query: 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA-LSFPGVERVVYS 276
SCSGSG ++ + DP +RL +L AFQ LRHA L+FP V+RVVYS
Sbjct: 309 SCSGSGMLDRQIVY------GKEKRDP---QRLKQLQAFQVFLLRHALLNFPNVKRVVYS 359
Query: 277 TCSIHQVENEDVIKSVL 293
TCS H ENE+VI +L
Sbjct: 360 TCSTHSEENEEVIDEIL 376
>gi|424513274|emb|CCO66858.1| predicted protein [Bathycoccus prasinos]
Length = 648
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 122/382 (31%), Positives = 183/382 (47%), Gaps = 86/382 (22%)
Query: 23 AEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTP--------DVPKPRYVRVNTLK 74
AEK ++ G ++ LA+ L + ++ + + + P D P R+ RVN +K
Sbjct: 187 AEKLIVSKTGELKNQLARRLKKANAQTALEFVE-RRLPEKVRKIVNDDPMSRFARVNAMK 245
Query: 75 M-DVDSAVLELGKQ-FVVQKDDL-----------VPDLLILPPGCD---LHVHPLIVNGC 118
+ DV V EL ++ F +++D ++ C+ L ++ NG
Sbjct: 246 VKDVGVLVRELRERGFTFEEEDAHLGRGEKERGNDCRYILFAKDCNRKKLSGMKMVKNGE 305
Query: 119 VFLQGKASSMVAAALAPKPGWK-----------------VLDACSAPGNKTVHLAALMKG 161
+ LQGK+S M A L + V+DAC+APGNKT HLAAL+
Sbjct: 306 LILQGKSSCMPAHCLLVNEDERDGRDAMSAIFERIRQSDVIDACAAPGNKTTHLAALLDK 365
Query: 162 K-------GKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAI 213
K GK+ A E + R +RL+DT+ L G + + V +FL +D D Y VR+I
Sbjct: 366 KNNTYNRGGKVFAFEKDHRRAQRLRDTVDLYGCSKTVVVAKKNFLEVDVNDAKYRNVRSI 425
Query: 214 LLDPSCSGSGTAAERLDHLLP------------------SHASG--------HTADPTEM 247
LLDPSCSGSGT R D L+ +H+ + + T
Sbjct: 426 LLDPSCSGSGTVQNRGDALMEYALKDGYDDDDDDDDGDDNHSDKIKREEEEENEEEQTRK 485
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF 307
+R+ L FQ +AL HA+ FPGV R+ YSTCSI++ ENEDV++ V+P+A GF+LA
Sbjct: 486 KRVMSLQKFQLEALSHAMRFPGVLRISYSTCSIYREENEDVVQKVMPLAEELGFELAKCL 545
Query: 308 PN----------GTAEASQFLK 319
P GT EA++ ++
Sbjct: 546 PKWPRRGFAEVLGTTEAAKVVR 567
>gi|402589287|gb|EJW83219.1| hypothetical protein WUBG_05868 [Wuchereria bancrofti]
Length = 434
Score = 159 bits (401), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 128/245 (52%), Gaps = 32/245 (13%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQ-------------------------FVVQKDDLV 96
V PRY RVNTLK D A+ L + V D V
Sbjct: 130 VENPRYARVNTLKWSFDEALQALQDEEWNISTLEPQEHNDWYKIAINSMLKNQVYIDCHV 189
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
+LL+ P DLH H ++ +G + LQ KAS + L PK G + D C+APG KT HLA
Sbjct: 190 KELLLFPANTDLHQHWMVTSGYLLLQDKASCLPGLVLNPKAGTCIFDICAAPGMKTTHLA 249
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
AL++ KGKI A + +R++ L I+ +GA N+ GDFL D + +++VR LLD
Sbjct: 250 ALVQNKGKIWAIDKASDRIKTLHAMIEKAGAINVSTYCGDFLRTDVTNNKFNKVRYALLD 309
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYS 276
P CSGSG +R+D L+ +T+ RL LS Q L+HA+ P ++++VYS
Sbjct: 310 PPCSGSGI-VKRMDQLIDEEERVNTS------RLRSLSNLQAMLLKHAMGLPNLKKIVYS 362
Query: 277 TCSIH 281
TCSIH
Sbjct: 363 TCSIH 367
>gi|392574130|gb|EIW67267.1| hypothetical protein TREMEDRAFT_72198 [Tremella mesenterica DSM
1558]
Length = 523
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 112/317 (35%), Positives = 161/317 (50%), Gaps = 43/317 (13%)
Query: 18 WPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNT----- 72
WP +A ++ HK L +L +R + EDL Q + RYVR N
Sbjct: 107 WPPKEA---ILKHKSRFHSELVKLQIREGKQRKEDLARSSQGGEA---RYVRWNPNIDLS 160
Query: 73 --LKMDVDSAVLELGKQFVVQK--------------DDLVPD-LLILPPGCDLHVH-PLI 114
+D+ L +++ + D +PD LL+ PPG + +
Sbjct: 161 RPEDWSLDALFRHLKEKYGFENVEETWPIPSGKFFMDPHLPDCLLVFPPGTNWWIEDEWY 220
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWK-----VLDACSAPGNKTVHLAALMKGKGKIVACE 169
+G V LQ KAS A L GW+ LDA +APGNKT HLAALM + I A E
Sbjct: 221 ASGAVILQDKASCFPAKVLMH--GWRDGEGECLDATAAPGNKTSHLAALMGNRSTIWAFE 278
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+K R L+ + +G N++V + DFL +P+D +++V ILLDPSCSGSG RL
Sbjct: 279 RSKGRFITLEKMLAKAGCNNVKVRNSDFLESNPRDEQFAKVTRILLDPSCSGSGI-VNRL 337
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
D+L+ + + + ERL+KL+AFQ + + HA FP R+VYSTCSIH E+E V
Sbjct: 338 DYLVEAEVD----ESGQAERLDKLAAFQLQMILHAFQFPAARRIVYSTCSIHAEEDEQVA 393
Query: 290 KSVLPI--AMSFGFQLA 304
++ L A + G++LA
Sbjct: 394 RAALQSSDAQAAGWKLA 410
>gi|312091304|ref|XP_003146932.1| hypothetical protein LOAG_11363 [Loa loa]
gi|307757905|gb|EFO17139.1| hypothetical protein LOAG_11363 [Loa loa]
Length = 434
Score = 158 bits (399), Expect = 4e-36, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 129/245 (52%), Gaps = 32/245 (13%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQ------FVVQKDD-------------------LV 96
V PRY RVNTLK D A+ L + Q+DD V
Sbjct: 130 VENPRYARVNTLKWSFDEALQALQDEGWSISSLEPQEDDDWYKIAVSSMLKNQVYIDCHV 189
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
+LL+ P DLH H ++++G + LQ KAS + + L PK G + D C+APG KT HLA
Sbjct: 190 NELLLFPANADLHQHWMVIDGYLLLQDKASCLSSLVLNPKAGTYIFDICAAPGMKTTHLA 249
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
AL++ +GKI A + +RV+ L + +GA N+ GDFL D + +VR LLD
Sbjct: 250 ALVQNEGKIWAIDRASDRVKTLCTMVDKAGAINVSTCCGDFLRTDVTSKRFDKVRYALLD 309
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYS 276
P CSGSG +R+D L+ +T+ RL LS Q L+HAL P ++++VYS
Sbjct: 310 PPCSGSGI-VKRMDQLINGEERINTS------RLQSLSNLQAMLLKHALGLPNLKKIVYS 362
Query: 277 TCSIH 281
TCSI+
Sbjct: 363 TCSIY 367
>gi|225713816|gb|ACO12754.1| methyltransferase NSUN5 [Lepeophtheirus salmonis]
Length = 431
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 107/298 (35%), Positives = 156/298 (52%), Gaps = 55/298 (18%)
Query: 38 LAQLLVRNK-VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV------- 89
L +L R K +K++ + Q + KPR+ RVNT K+ D A+ K FV
Sbjct: 105 LEIMLKRQKQLKALSKELCFSQKVKIVKPRWARVNTFKISFDDAL----KHFVEMDGLNY 160
Query: 90 ------VQKDDLVPDLLILPPG---CDLHV--------------HPLIVNGCVFLQGKAS 126
+ D + + +L P CDLHV H L +NG + LQ KAS
Sbjct: 161 LEYDQDTKYQDFLEKVRLLEPYEFMCDLHVDNLLVFHPKTAFYSHELYLNGSIILQDKAS 220
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
++ AL K G V+DAC+APGNKT +A+ + G + A E ++ER++ L T++ +G
Sbjct: 221 TLPIQALNVKEGSIVMDACAAPGNKTTQIASCVGLNGGVYAIERDEERIQILDQTLERAG 280
Query: 187 AAN--IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
++V + DF L+P D +V I+LDPSCS SG +L A G+
Sbjct: 281 IHKSLVKVCNIDFTTLNPDDSP--DVEYIVLDPSCSSSG--------ILSDVAIGN---- 326
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ 302
RL+KLSAFQ K L HAL FP V ++ YSTCS+H++ENE+VI++++ F Q
Sbjct: 327 ----RLSKLSAFQFKMLEHALKFPNVSKISYSTCSVHKIENEEVIEAIVKKHPHFKVQ 380
>gi|50550307|ref|XP_502626.1| YALI0D09691p [Yarrowia lipolytica]
gi|49648494|emb|CAG80814.1| YALI0D09691p [Yarrowia lipolytica CLIB122]
Length = 506
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 103/306 (33%), Positives = 162/306 (52%), Gaps = 31/306 (10%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMD---- 76
G + + H+ ++ L + +++KV +++L+ TP R++R+NT+ +
Sbjct: 101 GPLKDMFLAHQTRLKSELTKFKLKHKVSDLDELVEEDSTP----IRWIRINTVLSNEEEF 156
Query: 77 --------------VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
++ ++ G+ + KD VP L + P L L G + +Q
Sbjct: 157 HKTPLIARLKPIDKIEGGTIQPGQ---IYKDIHVPHLYGIHPREKLANCELYKQGKIIIQ 213
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDT 181
+AS A L P+PG K++D CSAPGNKT HLA+ + G G I A E + R + L
Sbjct: 214 DRASCFPATILNPQPGQKLIDCCSAPGNKTTHLASFVAGTPGSIDAFEKDAIRAKLLTKM 273
Query: 182 IKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+K +G N I+V GDF + +P D Y EV IL+DPSCSGSG + + + +
Sbjct: 274 VKTAGCHNCIKVNVGDFTDTNPDD--YPEVEGILVDPSCSGSGIFGRKHEDDAAAAEETN 331
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMS 298
D + RL+KLS FQ + ++HAL F ++VVYSTCSIH +ENE+V++ +L +
Sbjct: 332 RDDQKDQFRLHKLSEFQYRIVKHALLFGSAKKVVYSTCSIHNIENEEVVQKLLLDSQVAA 391
Query: 299 FGFQLA 304
G+QLA
Sbjct: 392 EGWQLA 397
>gi|307185900|gb|EFN71727.1| Putative methyltransferase NSUN5 [Camponotus floridanus]
Length = 750
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 98/258 (37%), Positives = 138/258 (53%), Gaps = 36/258 (13%)
Query: 61 DVPKPRYVRVNTLKMDVDSAV------------------------LELGKQFVVQKDDLV 96
D+ KPRYVR+NTL + V+ A+ L+L K + +Q D +
Sbjct: 267 DMRKPRYVRINTLLISVEKAISLFQKEGWKLLPKSTTYSSYLRSLLQLSKPYFIQ-DLHI 325
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
P++ P H H NG + LQ KAS + A L P G VLD C+APG KT H+A
Sbjct: 326 PEVFAFPSSTYFHKHASYKNGEIILQDKASCLPAHLLNPVSGSIVLDMCAAPGMKTTHIA 385
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
A ++ G+I A E++ +R L IK S + ++ L+ D L LDPK YS V IL+D
Sbjct: 386 AKLQNYGQIYAVEIDAKRFETLFKQIKTSHSFCVKPLNQDALTLDPKQ--YSHVEYILVD 443
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVY 275
PSCSGSG ++ +T + +RL L +FQ LR+AL +FP +R++Y
Sbjct: 444 PSCSGSG--------IVDRPEQSNTNNKLLSKRLQNLHSFQVYLLRYALFNFPNAKRIIY 495
Query: 276 STCSIHQVENEDVIKSVL 293
STCS++ ENE+VI VL
Sbjct: 496 STCSLYPEENEEVIDEVL 513
>gi|440299870|gb|ELP92398.1| williams-beuren syndrome critical region protein, putative
[Entamoeba invadens IP1]
Length = 372
Score = 156 bits (395), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 101/275 (36%), Positives = 139/275 (50%), Gaps = 36/275 (13%)
Query: 37 ALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQF-----VVQ 91
A+ ++++ NK E + L P +Y R+N+L + QF V+
Sbjct: 89 AIKRMILANK----ESIPKLETQSTTPLFKYYRMNSL----------VTTQFPGITNTVE 134
Query: 92 KDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNK 151
D +P L + P L + LI Q K S A L P+ + +DAC+APGNK
Sbjct: 135 TDKEIPFLFKITPPLKLQIESLIS------QDKPSCFPAFILNPEENSECIDACAAPGNK 188
Query: 152 TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 211
T HLAA+MK GKI A + +K+R L+ ++ A N+EV DFL +DP D Y +V+
Sbjct: 189 TTHLAAIMKNTGKIYAFDKDKKRAELLQKNVEKCNAKNVEVSCNDFLMVDPNDAKYEKVK 248
Query: 212 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE 271
IL DPSCSGSG +L G D ERL KL+ FQ + HAL F V+
Sbjct: 249 YILCDPSCSGSG--------ILERKNLGEKMDE---ERLKKLAEFQTSVVLHALKFKNVK 297
Query: 272 RVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATP 306
+V YSTCS++ ENE V+K VL F + A P
Sbjct: 298 KVTYSTCSVNVEENEMVVKRVLSQNKDFKLEKALP 332
>gi|367027524|ref|XP_003663046.1| hypothetical protein MYCTH_50843 [Myceliophthora thermophila ATCC
42464]
gi|347010315|gb|AEO57801.1| hypothetical protein MYCTH_50843 [Myceliophthora thermophila ATCC
42464]
Length = 629
Score = 156 bits (394), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 113/342 (33%), Positives = 159/342 (46%), Gaps = 69/342 (20%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTP-DVPKPRYVRVNTLKMDVDS--------- 79
HK IQ + +R K ++E L A P PR++RVNTLK VD
Sbjct: 102 HKARIQAEFTRARIRRKCSTVEALKAAVDAQLGPPHPRWIRVNTLKSTVDEQLDTTFKGF 161
Query: 80 ----------AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
A GK+ + D +P+L+ PG D G + LQ KAS
Sbjct: 162 EMVATVEEVMASASTGKRLICL-DATIPNLIAASPGIDFTKTEAYKAGAIILQDKASCFP 220
Query: 130 AAALAPKPG-WKVLDACSAPGNKTVHLAALMKGKG-----KIVACELNKERVRRLKDTIK 183
A L P+P ++DACSAPGNKT HLA ++ +G +I+A E +K+R + L+ ++
Sbjct: 221 AYLLDPRPEHGDIIDACSAPGNKTTHLAGILHERGFAEGQRILAFEKDKQRAKTLEKMVR 280
Query: 184 LSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA--ERLDHLLP----- 234
+G+ + V+ DFL DP P + V A+LLDPSCSGSG + + LP
Sbjct: 281 TAGSDKVTVIRPGADFLKTDPNAPEFRSVGALLLDPSCSGSGIVGRDDTPEFHLPSPGGS 340
Query: 235 -SHASGHTADPTEME------------------------------RLNKLSAFQKKALRH 263
S AS + A+P ++ RL L++FQ K L H
Sbjct: 341 RSPASVNDANPKNLKRKRESPPTQTVLVDDDGKETIVSSEQALQTRLEALASFQLKILLH 400
Query: 264 ALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
A +FP RV YSTCS H ENE V+ + L +A G++L
Sbjct: 401 AFAFPAATRVTYSTCSTHAAENERVVAAALRSDVARQRGWRL 442
>gi|448091849|ref|XP_004197430.1| Piso0_004683 [Millerozyma farinosa CBS 7064]
gi|448096430|ref|XP_004198461.1| Piso0_004683 [Millerozyma farinosa CBS 7064]
gi|359378852|emb|CCE85111.1| Piso0_004683 [Millerozyma farinosa CBS 7064]
gi|359379883|emb|CCE84080.1| Piso0_004683 [Millerozyma farinosa CBS 7064]
Length = 452
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 110/317 (34%), Positives = 162/317 (51%), Gaps = 42/317 (13%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTL 73
+HP+ E FL +K + +L V++KVKSI++L + + + P R+VR+NTL
Sbjct: 96 KHPI-----KEAFLK-NKTRLNAEFIKLKVKHKVKSIDELQNSFSSDETP-VRWVRINTL 148
Query: 74 KMDVDS--------------AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCV 119
+ + +E +Q + KD VP L + P + G V
Sbjct: 149 LISENEFFTKHKFFAGLKRVDTIESLEQGSLYKDTFVPHLYGIHPKEKITSTEAYRKGHV 208
Query: 120 FLQGKASSMVAAALAPKPGWK---VLDACSAPGNKTVHLAALMKGKGK---IVACELNKE 173
+Q +AS A L K V+DACSAPGNKT H+A+L+ + A E + +
Sbjct: 209 IIQDRASCFPAHILNSDKEHKHKFVVDACSAPGNKTTHIASLIDQNSSNSCVFAFERDNK 268
Query: 174 RVRRLKDTIKLSG----AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
RV L K++ A I+V H DF ++DP D Y V +++DPSCSGSG +
Sbjct: 269 RVETLNKMSKIACPHKFGALIKVTHADFTSVDPSD--YESVTGLIVDPSCSGSGIFGRAV 326
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
+ T + + ERL +LS+FQ K ++HALSFP +RVVYSTCSIH ENE+V+
Sbjct: 327 E-------DEQTKEEVDSERLRRLSSFQYKIMKHALSFPSAKRVVYSTCSIHMEENEEVV 379
Query: 290 KSVL--PIAMSFGFQLA 304
+L S G++LA
Sbjct: 380 SDLLNDETIKSLGWELA 396
>gi|346468509|gb|AEO34099.1| hypothetical protein [Amblyomma maculatum]
Length = 441
Score = 155 bits (391), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 105/283 (37%), Positives = 143/283 (50%), Gaps = 34/283 (12%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQ--------------------- 91
L A+ Q P PRY RVNTL ++ + + +L + +
Sbjct: 130 LAAVPQAEKAPLPRYARVNTLLLNTSTVIQQLEEAGFTRIRYPRRRGLAWFLERVCRLEP 189
Query: 92 ----KDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSA 147
KD + D L+ G L L+ + LQ KAS M AL P PG +LDAC+A
Sbjct: 190 HEFLKDFHLRDWLVFGKGARLTQLDLVHKAQLLLQDKASGMAVVALDPWPGAVLLDACAA 249
Query: 148 PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI-EVLHGDFLNLDPKDPA 206
PG KT + AALM+ G I+A + ER++ L+D +++ G +I +V DFL+LDP
Sbjct: 250 PGMKTSYAAALMQNTGHILAVDKCGERLQALRDLMQVGGFKSICKVQEADFLDLDPSAEP 309
Query: 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
IL+DPSCSGSG RL L +H+ +RL +LS Q L+HAL
Sbjct: 310 QCASELILVDPSCSGSGLCG-RLGRELDAHSD------EGRDRLRRLSCVQAMLLKHALR 362
Query: 267 FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
FP +RVVYSTCS+H+ ENEDV+ VL + F LA P
Sbjct: 363 FPHCKRVVYSTCSVHKQENEDVVAEVLTWSKG-QFVLAHALPE 404
>gi|402224509|gb|EJU04571.1| S-adenosyl-L-methionine-dependent methyltransferase [Dacryopinax
sp. DJM-731 SS1]
Length = 482
Score = 153 bits (387), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 105/299 (35%), Positives = 151/299 (50%), Gaps = 32/299 (10%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ L+ H+ ++ L +L +R V+ E L PRYVRVN + A
Sbjct: 85 GPIKQALLRHQTRLKAELVRLKIRRGVEGNEGLAEKGDERANQIPRYVRVNANVWTMGEA 144
Query: 81 VLELG----------------KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+ KQF + D +PDLL+ P L PL+ G + LQ K
Sbjct: 145 IAHFEAAGFSLTSLPDAFPEPKQFAI--DLHIPDLLLFHPSASLTSSPLLTEGKIILQDK 202
Query: 125 ASSMVAAAL----------APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
AS A L A KV+DA +APGNKT L+ALM +G+I A E + +R
Sbjct: 203 ASCFPAYILISPVSADQKSARADVGKVVDATAAPGNKTSALSALMGNQGEITAFERDPKR 262
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
+ L+ +K + N+ L+ DFL++DP+D + V ILLDPSCSGSG R+D+LL
Sbjct: 263 FKTLQIMLKKARCKNVTPLNKDFLSVDPEDDVFEGVTHILLDPSCSGSGI-VNRMDYLLE 321
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+G + RL KL +FQ K ++HA+ R+ YSTCSIH+ E+E V++ L
Sbjct: 322 ---AGEEEPGVDEARLLKLGSFQLKMIKHAMKIKSANRITYSTCSIHKEEDEYVVRDAL 377
>gi|300709045|ref|XP_002996691.1| hypothetical protein NCER_100191 [Nosema ceranae BRL01]
gi|239606011|gb|EEQ83020.1| hypothetical protein NCER_100191 [Nosema ceranae BRL01]
Length = 362
Score = 153 bits (387), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 91/251 (36%), Positives = 134/251 (53%), Gaps = 26/251 (10%)
Query: 62 VPKPRYVRVNTLK-MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
V K +Y+R+NT+K + D + L+L F+ P++ L D + G +
Sbjct: 105 VIKQKYIRLNTVKGVHSDISNLKLESTFI-------PNVYKLLEAVDFSKNKAYKEGKIV 157
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q AS + A L P P +++DAC+APGNKT HL+ L+K GK+ A E++ +R + L
Sbjct: 158 IQNIASCLPAYILDPLPNSRIIDACAAPGNKTSHLSNLLKNTGKVYAIEVDSKRFKILNY 217
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+ G N+E ++ DF ++ P YS + I++DPSCSGSG H
Sbjct: 218 HVNKLGLKNVETINKDFFDIKP--DKYSNIDYIVVDPSCSGSGM---------------H 260
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
+ ER+ L FQ K L+HALSF G +++VYSTCS+H+ E EDVI V+
Sbjct: 261 DFYEKDDERIKNLQKFQIKILKHALSF-GAKKIVYSTCSLHKEEGEDVINEVIKDDKYEI 319
Query: 301 FQLATPFPNGT 311
F LA F NG
Sbjct: 320 FDLAKIFDNGV 330
>gi|149246149|ref|XP_001527544.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447498|gb|EDK41886.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 494
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 102/299 (34%), Positives = 154/299 (51%), Gaps = 32/299 (10%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA + +K +Q +L ++ KVK++ +L + D R+ R+NT+K+D D
Sbjct: 98 PIKDA---FLANKTRLQAEFIKLKLKYKVKAVSELPTKDSSEDETPVRWFRINTIKIDKD 154
Query: 79 ---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
+ + EL + DD +P L + P L G V +Q
Sbjct: 155 RFFKKHPFFAKLQPVNTIAELTSPGFIYSDDYIPHLYGIHPKEKLSAQEAYKLGEVIIQD 214
Query: 124 KASSMVAAALAPKPG---WKVLDACSAPGNKTVHLAALM-KGKGKIV-ACELNKERVRRL 178
+AS A L P +V+DACSAPGNKT H AA + +G+ +V A E + +RV L
Sbjct: 215 RASCFPAHILNQDPNDVHKQVMDACSAPGNKTTHAAAYLPQGEDSVVFATERDAKRVAIL 274
Query: 179 KDTIKLSGAAN----IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
+ + + N +++ H DF ++P+D + +V +++DPSCSGSG +D
Sbjct: 275 RTMCEKATGKNRKRLVQITHKDFTTINPED--FPDVTGLIVDPSCSGSGIFGRAMDENSE 332
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
S T D ERL KL++FQ ++HALSFPG +VVYSTCSIH ENE V+ +L
Sbjct: 333 ESKSDSTID---QERLRKLASFQFVIMKHALSFPGARKVVYSTCSIHAEENERVVIDLL 388
>gi|71998419|ref|NP_497089.2| Protein Y53F4B.4, isoform b [Caenorhabditis elegans]
gi|34556111|emb|CAB70101.2| Protein Y53F4B.4, isoform b [Caenorhabditis elegans]
Length = 439
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 95/252 (37%), Positives = 134/252 (53%), Gaps = 32/252 (12%)
Query: 65 PRYVRVNTLKMDVDSAV--LELGKQFVV--------------QKDDLV------PDLLIL 102
PRY R+NTLK D A+ LE K ++ KDD V +L+I
Sbjct: 139 PRYARINTLKWTADEAMKTLETEKWKILGTLKPENFAEMVTKMKDDEVYVDPHVENLIIF 198
Query: 103 PPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
P + + + ++ + LQ KAS + A L P+PG +V D C+APG KT H AA+M+
Sbjct: 199 APNIQNFYEYWMVEQRYLILQDKASCLPAFLLNPRPGSQVFDTCAAPGMKTSHAAAIMEN 258
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
+GK+ A + +RV +K + S A GDFL D D +S+V+ ++DP CSG
Sbjct: 259 QGKVWAMDRAADRVATMKQLLDASKVAIASSFCGDFLKTDVTDKKFSKVKFAIVDPPCSG 318
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIH 281
SG +R+D + +A E ERL KL Q L+HAL PG++R VYSTCS+H
Sbjct: 319 SGI-VKRMDEITGGNA--------EKERLEKLKNLQAMILKHALKLPGLKRAVYSTCSVH 369
Query: 282 QVENEDVIKSVL 293
+ ENE V+ VL
Sbjct: 370 EEENEQVVDEVL 381
>gi|194218912|ref|XP_001916205.1| PREDICTED: LOW QUALITY PROTEIN: putative methyltransferase
NSUN5-like [Equus caballus]
Length = 420
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 107/288 (37%), Positives = 148/288 (51%), Gaps = 44/288 (15%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMAL--YQTPDVPKPRYVRVNTLKMDVDSAVLEL 84
L H+ ++ LA+L V V EDL+ + P V PR+VRVNTLK D A+
Sbjct: 95 LHRHEARLKAELARLKVHRGVSRNEDLLEVGCRPGPAVQVPRFVRVNTLKTCSDDAIDYF 154
Query: 85 GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV---AAALAPKPGWKV 141
+Q QG+ASS A LAP V
Sbjct: 155 KRQGFS------------------------------YQGQASSTAVFPAMLLAPHRVSHV 184
Query: 142 LDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201
+DA +APGNKT HLAAL+K +GKI A +L+ +R+ + + +G + E+ DFL +
Sbjct: 185 IDADAAPGNKTSHLAALLKKQGKIFAFDLDAKRLASMATLLARAGVSCCELAKEDFLAVS 244
Query: 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
P D Y +V+ ILLDPSCSGSG +L+ A ERL+ L+ FQ++AL
Sbjct: 245 PSDQRYRQVQYILLDPSCSGSGMLTRQLEE--------PGAGAPSKERLHALAGFQQRAL 296
Query: 262 RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
HAL+FP ++R+VYSTCS+ Q ENEDV+ L + F+LA P+
Sbjct: 297 CHALTFPSLQRLVYSTCSLCQEENEDVVCDALQQSPG-AFRLAPVLPS 343
>gi|387592684|gb|EIJ87708.1| hypothetical protein NEQG_02255 [Nematocida parisii ERTm3]
gi|387595313|gb|EIJ92938.1| hypothetical protein NEPG_02337 [Nematocida parisii ERTm1]
Length = 373
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 93/245 (37%), Positives = 134/245 (54%), Gaps = 22/245 (8%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
P Y+R+NT+K D +SA+ L + + +P++ + + +G F+Q
Sbjct: 115 PAYLRINTIKAD-ESAISSLAIERTI-----IPNVYKVLEKVNWSKLKSYQDGLFFIQDL 168
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
+S + A L P V+DACSAPGNKT HLA ++ I A E + ER + L++ I+
Sbjct: 169 SSCLPAYVLKPAKNSVVIDACSAPGNKTTHLA-MLSPTSTIYAVEKDTERYKILREMIEK 227
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
SGA N+ ++ DFL ++ + + IL+DPSCSGSG H +
Sbjct: 228 SGAENVITMNADFLGINKEAEEVFQAEYILVDPSCSGSGI---------------HPGEE 272
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
+ ERLNKLSAFQ K L ALS+P V++VVYSTCSI++ ENE V+K VL F + A
Sbjct: 273 KDHERLNKLSAFQVKILLKALSYPKVKKVVYSTCSIYEEENEAVVKQVLDACPGFVLEKA 332
Query: 305 TPFPN 309
P N
Sbjct: 333 LPLWN 337
>gi|308502930|ref|XP_003113649.1| hypothetical protein CRE_26337 [Caenorhabditis remanei]
gi|308263608|gb|EFP07561.1| hypothetical protein CRE_26337 [Caenorhabditis remanei]
Length = 732
Score = 153 bits (386), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 130/252 (51%), Gaps = 32/252 (12%)
Query: 65 PRYVRVNTLKMDVDSAVLELG----------------------KQFVVQKDDLVPDLLIL 102
PRY R+NTLK + A+ L K+ + D V LLI
Sbjct: 432 PRYARINTLKWTAEEAMKTLETEEWKLQGSASVENFAEVVGNMKEDEIYVDPHVESLLIF 491
Query: 103 PPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
P + H + ++ + LQ KAS + A L P+PG +VLD C+APG KT H AA+M
Sbjct: 492 APNIQNFHEYWMVEQRYLILQDKASCLPAFLLNPRPGSQVLDTCAAPGMKTSHAAAIMDN 551
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
+GK+ A + +RV +K + S A GDFL D D +S+V+ ++DP CSG
Sbjct: 552 QGKVWAMDRAADRVAVMKQLLDGSKVAIASAFCGDFLKTDITDKKFSKVKFAIIDPPCSG 611
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIH 281
SG +R+D + +A E ERL KL Q L+HAL PG++R VYSTCSIH
Sbjct: 612 SGI-VKRMDEITGGNA--------EKERLEKLKNLQAMILKHALKLPGLKRAVYSTCSIH 662
Query: 282 QVENEDVIKSVL 293
+ ENE VI VL
Sbjct: 663 EEENEQVIDEVL 674
>gi|242002804|ref|XP_002436045.1| williams-beuren syndrome critical region protein, putative [Ixodes
scapularis]
gi|215499381|gb|EEC08875.1| williams-beuren syndrome critical region protein, putative [Ixodes
scapularis]
Length = 445
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 101/292 (34%), Positives = 147/292 (50%), Gaps = 40/292 (13%)
Query: 48 KSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELG---------------KQFVVQK 92
++IE + ++ P V PRY RVNT+ + + +L ++FV +
Sbjct: 120 EAIEKALRKFRVPLVHPPRYARVNTVLTNTKDVIEQLESLGFHRKSYKKSRGFQEFVERV 179
Query: 93 DDLVP----------DLLILPPGCDLHVHPLIVNGCVFLQGKASS-----MVAAALAPKP 137
L P D L+ L L+ + + LQ KAS+ M ALAP P
Sbjct: 180 ACLEPHEFMKDLHRKDWLVFSKDAKLSHSQLVADLHLLLQDKASAQAASGMAVVALAPTP 239
Query: 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI-EVLHGD 196
G V+DAC+APG KT ++AALM+ GKI+A + ++ER L+D ++ +G + I +V D
Sbjct: 240 GSVVIDACAAPGMKTTYIAALMENTGKILAMDHDQERTLSLRDLVQRAGVSGICKVRTAD 299
Query: 197 FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAF 256
FL +DP+ Y + IL+DPSC+GSG + L P+ ++RL KL A
Sbjct: 300 FLTVDPEQSPYCDAEFILVDPSCTGSGMT----NRLEPNPRDA----AQNLDRLRKLRAI 351
Query: 257 QKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
Q L+HA FP V R+ YSTCS+H ENE+V+ L FQL P
Sbjct: 352 QAMLLKHATKFPKVRRIAYSTCSVHAEENEEVVGEALRFTRG-RFQLEKVLP 402
>gi|341885000|gb|EGT40935.1| hypothetical protein CAEBREN_03646 [Caenorhabditis brenneri]
Length = 439
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/252 (38%), Positives = 135/252 (53%), Gaps = 32/252 (12%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQ-FVVQ---------------KDDL------VPDLLIL 102
PRY R+NTLK + A+ L ++ + +Q KDD V +LLI
Sbjct: 139 PRYARINTLKWTAEEAMKTLEEEEWKLQGAASAENFAEVVGKMKDDEIYIDPHVENLLIF 198
Query: 103 PPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
P + H + ++ + LQ KAS + A L P+PG +V D+C+APG KT H AA+M+
Sbjct: 199 APNIQNFHEYWMVEQRYLILQDKASCLPAFLLNPRPGSQVFDSCAAPGMKTSHAAAIMEN 258
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
+GK+ A + +RV +K + S GDFL D D +S+V+ ++DP CSG
Sbjct: 259 QGKVWAMDRAADRVATMKQLLDGSDVKIASAFCGDFLKTDVTDKKFSKVKFAIVDPPCSG 318
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIH 281
SG +R+D + +A E ERL KL Q L+HAL PG++R VYSTCSIH
Sbjct: 319 SGI-VKRMDEITGGNA--------EKERLEKLKNLQAMILKHALKLPGLKRAVYSTCSIH 369
Query: 282 QVENEDVIKSVL 293
+ ENE VI VL
Sbjct: 370 EEENEQVIDKVL 381
>gi|260942277|ref|XP_002615437.1| hypothetical protein CLUG_04319 [Clavispora lusitaniae ATCC 42720]
gi|238850727|gb|EEQ40191.1| hypothetical protein CLUG_04319 [Clavispora lusitaniae ATCC 42720]
Length = 479
Score = 152 bits (385), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/306 (34%), Positives = 162/306 (52%), Gaps = 34/306 (11%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKP-RYVRVNT 72
+HP+ E FL L+K +Q L +L +++KV S+E L + P R++R+NT
Sbjct: 113 KHPM-----KEAFL-LNKTRLQAELTKLKLKHKVTSVEKLPLKEGIDEDETPVRWIRINT 166
Query: 73 LKMDVD---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNG 117
+K++ + S++ E+ + V+ D+ + +L L P + P + G
Sbjct: 167 IKINSEQFFKKHSFFSQLEPVSSIAEITQPGVIYHDEHIQNLYGLHPREKITSTPAYLQG 226
Query: 118 CVFLQGKASSMVAAALAPKPG---WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
+ +Q +AS A L P +V+DAC+APGNKT H A+ + KG + A E + R
Sbjct: 227 EIIIQDRASCFPAEILNNDPNDVHSEVIDACAAPGNKTTHAASFVGPKGVVYAFERDNRR 286
Query: 175 VRRLKDTI-KLSGAAN---IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
V+ LK K +G A I H DF + P D + V +++DPSCSGSG ++
Sbjct: 287 VKVLKTMCEKATGKAKKSLIHPTHADFTTIAPSD--FPSVTGMIVDPSCSGSGIFGRAIE 344
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIK 290
+++ + + ERLNKL+ FQ K ++HALSFP V +VVYSTCSIH ENE V+
Sbjct: 345 D---ANSQEQAREEIDTERLNKLAGFQFKIMKHALSFPKVHKVVYSTCSIHPHENERVVV 401
Query: 291 SVLPIA 296
+L A
Sbjct: 402 DLLSDA 407
>gi|406604903|emb|CCH43644.1| putative methyltransferase [Wickerhamomyces ciferrii]
Length = 475
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 96/279 (34%), Positives = 148/279 (53%), Gaps = 25/279 (8%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELG- 85
++ HK + L +L +++KV+S ++L+ TP R+ R NT+K + + EL
Sbjct: 102 VLKHKTRLSAELTKLKLKHKVRSFDELIEEDDTP----VRWFRANTIKTTKEKVLSELEH 157
Query: 86 ----------KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAP 135
+ + D+ +P+L + P + L G + +Q +AS A L P
Sbjct: 158 LEEVDSIKKIQPGTIYHDEFIPNLFGIHPKEKITTTKLYEKGHIIIQDRASCFPAHILNP 217
Query: 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI-EVLH 194
P V+D+C+APGNKT HLA+ ++ G I A E + R + L + +GA+ I ++
Sbjct: 218 GPDDYVIDSCAAPGNKTTHLASYIQRDGSINAFERDVRRSKILDKMVTTAGASKIVKINT 277
Query: 195 GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLS 254
GDF P D + +V +++DPSCSGSG + P G +D ERL KLS
Sbjct: 278 GDFTQSKPSD--FEDVTGLVVDPSCSGSGIFGRAHEEENP---EGSYSD----ERLQKLS 328
Query: 255 AFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+FQ ++HALSFP ++VVYSTCSIH ENE V+ +L
Sbjct: 329 SFQFSIVKHALSFPNAKKVVYSTCSIHAQENERVVIDLL 367
>gi|322778737|gb|EFZ09153.1| hypothetical protein SINV_02088 [Solenopsis invicta]
Length = 603
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 100/257 (38%), Positives = 136/257 (52%), Gaps = 36/257 (14%)
Query: 62 VPKPRYVRVNTLKMDVDSAVL------------------------ELGKQFVVQKDDLVP 97
V KPRYVR+NTL + V+ A+ +L K + +Q D +P
Sbjct: 133 VIKPRYVRINTLLLSVEKAISIFQEDGWQLLSRSTTYSSYLRSLSQLSKPYFIQ-DLHIP 191
Query: 98 DLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAA 157
++L+ P H H NG + LQ KAS L P G VLD C+APG K H+AA
Sbjct: 192 EILVFPSSTLFHEHNGYRNGELILQDKASCFPVHLLDPVRGSVVLDMCAAPGMKATHVAA 251
Query: 158 LMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217
++ GK+ A E++ +R L IK + ++ +E L+ D L LDPK YS V IL+DP
Sbjct: 252 KLQNCGKVYAVEIDAKRFEILVSQIKKTHSSCVESLNQDALTLDPK--LYSHVEYILVDP 309
Query: 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYS 276
CSGSG +D S G E+ERL L +FQ LR+AL +FP +R++YS
Sbjct: 310 PCSGSGI----VDRPKQSDMDGK----PELERLQNLQSFQVYLLRYALFNFPNAKRIIYS 361
Query: 277 TCSIHQVENEDVIKSVL 293
TCS+H ENE+VI VL
Sbjct: 362 TCSLHPEENEEVIDEVL 378
>gi|307197971|gb|EFN79048.1| Putative methyltransferase NSUN5 [Harpegnathos saltator]
Length = 773
Score = 152 bits (384), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 159/303 (52%), Gaps = 41/303 (13%)
Query: 17 LWPVGDAEKFLMLHKGAIQLALAQL-LVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM 75
LW +K+L IQ L+ L+R ++ ++E ++ V +PRYVR+NTL +
Sbjct: 90 LW----GKKYLPNQSKPIQTVLSYADLLRKELLNLESTISSTTLKKVQRPRYVRINTLLL 145
Query: 76 DVDSAVLELGKQ------------------------FVVQKDDLVPDLLILPPGCDLHVH 111
++ A+ ++ + +Q D +P++L PP H H
Sbjct: 146 LIEQAISLFEREGWKLISKSATYPSYLQSLSLLSEPYFIQ-DFHIPEVLAFPPSTFFHDH 204
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
++G + LQ KAS + A LAP G VLD C+APG K+ HLAA ++ G + A E++
Sbjct: 205 ASYLDGQIVLQDKASCLSAHLLAPTEGSTVLDLCAAPGMKSTHLAAKLQNVGTVHAIEID 264
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
ER + L+ I ++ + +E + D L L+ K + VR IL+DPSCSGSG +D
Sbjct: 265 SERFQTLQQQIDITHSFCVEPHNQDALTLNTK--QFQNVRYILVDPSCSGSGI----IDR 318
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVIK 290
S + G TE RL+ L + Q LR+AL +FP V+RVVYSTCS++ ENE V+
Sbjct: 319 PKQSDSDGK----TEPRRLHNLQSIQVYLLRYALFNFPDVKRVVYSTCSVYPEENEQVVD 374
Query: 291 SVL 293
VL
Sbjct: 375 EVL 377
>gi|383860508|ref|XP_003705731.1| PREDICTED: putative methyltransferase NSUN5-like [Megachile
rotundata]
Length = 563
Score = 150 bits (380), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 106/287 (36%), Positives = 150/287 (52%), Gaps = 45/287 (15%)
Query: 39 AQLLVRNKVKSIEDLMAL-----YQTPD-VPKPRYVRVNTLKMDVDSAV----------- 81
AQ+++ + K E+L A+ ++TPD V K RYVR+NT+K+ ++ +
Sbjct: 103 AQIILSYETKLKEELSAIKTTDEHETPDSVHKARYVRINTIKLPLEKGISYFKEEGWVLL 162
Query: 82 ---------LELGKQ-----FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
LE+ K F+ +D +P+L + P G + G + +Q KAS
Sbjct: 163 PKCSDYTKHLEVVKNLEKPNFI--QDFHIPELFVFPKGTNFQDDRRYEAGEILIQDKASC 220
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+ A L PKPG VLD C+APG KT HLAALM G I A E + R L +K +GA
Sbjct: 221 LAAKILDPKPGSVVLDMCAAPGMKTSHLAALMNNTGTIYAVEFDVSRYAFLCKQVKATGA 280
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
++ + D L LD + + +V IL+DPSCSGSG LD + DP
Sbjct: 281 TCVKTIQKDALKLDGNN--FKDVEYILVDPSCSGSGM----LDRQITDEK--EKPDP--- 329
Query: 248 ERLNKLSAFQKKALRHA-LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+RL +L +FQ LR A L FP V++VVYSTCSI+ ENE V+ +L
Sbjct: 330 QRLRQLQSFQVFLLRRALLHFPNVKKVVYSTCSINPEENEQVVDEIL 376
>gi|68475292|ref|XP_718364.1| hypothetical protein CaO19.10135 [Candida albicans SC5314]
gi|68475493|ref|XP_718269.1| hypothetical protein CaO19.2604 [Candida albicans SC5314]
gi|46440029|gb|EAK99340.1| hypothetical protein CaO19.2604 [Candida albicans SC5314]
gi|46440128|gb|EAK99438.1| hypothetical protein CaO19.10135 [Candida albicans SC5314]
Length = 498
Score = 149 bits (377), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 159/311 (51%), Gaps = 34/311 (10%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA + +K +Q +L ++ KVKS++ L D R+ R+NT+K+D+D
Sbjct: 134 PMKDA---FLSNKTRLQAEFTKLKLKYKVKSVDQLPTKEADDDETPIRWFRINTIKIDID 190
Query: 79 ---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
S++ E+ + ++ DD +P+L + P + G + +Q
Sbjct: 191 RFYTKHPFFKQLQPVSSIDEITETGIIYSDDYIPNLFGVHPREKITSTEAYRLGEIIIQD 250
Query: 124 KASSMVAAALAPKPG---WKVLDACSAPGNKTVHLAALMKGKGKIV-ACELNKERVRRLK 179
+AS + L P +V+DAC+APGNKT H AA + +V A E + +RV+ LK
Sbjct: 251 RASCFPSHILNADPEDVHTQVIDACAAPGNKTTHAAAHLPNSDSVVYAFERDSKRVKILK 310
Query: 180 DTI-KLSGAAN---IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
K +G I+V H DF P+D + +V +++DPSCSGSG L+ S
Sbjct: 311 TMCEKATGKTKKKLIQVTHADFTTTKPED--FPDVTGLVIDPSCSGSGIFGRALED---S 365
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL-- 293
H + ERLNKL+ FQ ++HALSFP +VVYSTCSIH ENE V+ +L
Sbjct: 366 HNEEEIEN-VNTERLNKLAGFQFAIMKHALSFPSARKVVYSTCSIHAQENERVVVDLLSD 424
Query: 294 PIAMSFGFQLA 304
P G++LA
Sbjct: 425 PEVNRRGWKLA 435
>gi|242005991|ref|XP_002423843.1| williams-beuren syndrome critical region protein, putative
[Pediculus humanus corporis]
gi|212507059|gb|EEB11105.1| williams-beuren syndrome critical region protein, putative
[Pediculus humanus corporis]
Length = 503
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 98/265 (36%), Positives = 135/265 (50%), Gaps = 38/265 (14%)
Query: 58 QTPDVPKPRYVRVNTLKMDVDSAVLELGK-------------QFV----------VQKDD 94
+ D+ KPRYVRVNTL D + + K +F+ KD
Sbjct: 181 KNDDITKPRYVRVNTLYNTPDEIIKKFRKDGWTFIPVPNDYFEFIKVISNLGDDSFTKDF 240
Query: 95 LVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVH 154
+ +LL+ P + + L NG + LQ KAS + A L P P LD C+APG KT H
Sbjct: 241 HIKELLVFPSSVQFYENELYQNGSILLQDKASCLPAFLLKPTPNSIALDMCAAPGMKTTH 300
Query: 155 LAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDF--LNLDPKDPAYS---E 209
L+A+M+ KG + A E++ R + L D IK SG N+ L+ D LN D D +
Sbjct: 301 LSAIMRNKGTVYASEMDPNRYQVLCDLIKNSGCNNVITLNIDALKLNADANDSQMEWCKD 360
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FP 268
V IL+DPSCSGSG +R++ + +R+ KL FQ K L HAL+ FP
Sbjct: 361 VEYILVDPSCSGSGI-VDRMNIF--------EGEKKNNKRIKKLCGFQFKLLLHALTKFP 411
Query: 269 GVERVVYSTCSIHQVENEDVIKSVL 293
+RVVYSTCS+ ENE +++ VL
Sbjct: 412 NAKRVVYSTCSVLAEENEKIVEDVL 436
>gi|299473126|emb|CBN78702.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 621
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 124/356 (34%), Positives = 172/356 (48%), Gaps = 82/356 (23%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVR---NKVKSIEDLMALYQTPDVPK----PRYVRVNTL 73
G ++ LM +K ++ LA+ V +K S E L+ P + PRY RVN +
Sbjct: 109 GKLKRHLMQYKARLEECLAEAKVSAGLSKDASNESLL-----PKSARRHIFPRYARVNLV 163
Query: 74 KM-----DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
V +A+ + G + + D +VP LL+LPPG DLH H ++ +G + LQ K+S
Sbjct: 164 ACPEGAKGVAAALQKEG--YAAKVDGVVPSLLVLPPGTDLHDHAMVKDGRLVLQDKSSCF 221
Query: 129 VAAAL----------------APKPGWKVLDACSAPGNKTVHLAALM------------- 159
A AL A G V+DAC+APGNKT+H A+L+
Sbjct: 222 SAEALLGQEACAAAGATRDARAEWRGGDVIDACAAPGNKTMHAASLLHERASAAAAASAA 281
Query: 160 -----------------KGK-GKIVACELNKERVRRLKDTIKLSGAA---NIEVLHGDFL 198
GK K+ A + + R+ ++ + SGA+ IE DFL
Sbjct: 282 SSGGGSAGAGKVADRSNTGKRAKVFAFDKDLRRLALMRRRVDDSGASAGGAIETRLQDFL 341
Query: 199 NLDPKDPAYSEVRAILLDPSCSGSG--TAAERLDHLLPSHASGHTADPTEME----RLNK 252
+DP D YS+V AILLDPSCSGSG +A +RL G A + E R+ +
Sbjct: 342 EVDPADRRYSKVTAILLDPSCSGSGIVSAPDRLHENQGDADEGEGAPGGDREEGRSRVAR 401
Query: 253 LSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
L+AFQ + L A+SFP V+RV YSTCS+H VENEDV+ L Q TP P
Sbjct: 402 LAAFQLQGLLKAMSFPQVQRVCYSTCSVHAVENEDVVAKALD-------QQPTPSP 450
>gi|238879678|gb|EEQ43316.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 492
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 105/311 (33%), Positives = 159/311 (51%), Gaps = 34/311 (10%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA + +K +Q +L ++ KVKS++ L D R+ R+NT+K+D+D
Sbjct: 128 PMKDA---FLSNKTRLQAEFTKLKLKYKVKSVDQLPTKEADDDETPIRWFRINTIKIDID 184
Query: 79 ---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
S++ E+ + ++ DD +P+L + P + G + +Q
Sbjct: 185 RFYTKHPFFKQLQPVSSIDEITETGIIYSDDYIPNLFGVHPREKITSTEAYRLGEIIIQD 244
Query: 124 KASSMVAAALAPKPG---WKVLDACSAPGNKTVHLAALMKGKGKIV-ACELNKERVRRLK 179
+AS + L P +V+DAC+APGNKT H AA + +V A E + +RV+ LK
Sbjct: 245 RASCFPSHILNADPEDVHTQVIDACAAPGNKTTHAAAHLPNSDSVVYAFERDSKRVKILK 304
Query: 180 DTI-KLSGAAN---IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
K +G I+V H DF P+D + +V +++DPSCSGSG L+ S
Sbjct: 305 TMCEKATGKTKKKLIQVTHADFTTTKPED--FPDVTGLVVDPSCSGSGIFGRALED---S 359
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL-- 293
H + ERLNKL+ FQ ++HALSFP +VVYSTCSIH ENE V+ +L
Sbjct: 360 HNEEEIEN-VNTERLNKLAGFQFAIMKHALSFPSARKVVYSTCSIHAQENERVVVDLLSD 418
Query: 294 PIAMSFGFQLA 304
P G++LA
Sbjct: 419 PEVNRRGWKLA 429
>gi|254569854|ref|XP_002492037.1| Putative protein of unknown function with seven beta-strand
methyltransferase motif [Komagataella pastoris GS115]
gi|238031834|emb|CAY69757.1| Putative protein of unknown function with seven beta-strand
methyltransferase motif [Komagataella pastoris GS115]
gi|328351472|emb|CCA37871.1| hypothetical protein PP7435_Chr2-0174 [Komagataella pastoris CBS
7435]
Length = 436
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 99/291 (34%), Positives = 152/291 (52%), Gaps = 35/291 (12%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA + HK +Q L +L ++ KVK +E+L+ TP R+VR N LK +
Sbjct: 97 PLKDA---FLAHKTRLQAELTKLKIKYKVKDLEELIEDDDTP----VRWVRANLLKTSRE 149
Query: 79 SAV--------------LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+ LE+GK + D +P+L + P + + G + +Q +
Sbjct: 150 KFLNEFKHLIQVESFQELEVGK---IYHDQYIPNLFGVHPREKITSTDAYLKGRLIIQDR 206
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKD-TI 182
AS A L P PG K++D CSAPGNKT HLA+ + + I+A E + +R LK
Sbjct: 207 ASCFPAHILHPSPGDKIIDTCSAPGNKTTHLASYLGNRPDSIIAFEKDPKRAEVLKTLCA 266
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
K G + I++ GDF +P+D Y+++ ++DPSCSGSG + + T
Sbjct: 267 KAGGLSCIDIQVGDFTATNPED--YTDIDGFVIDPSCSGSGIFGRAFE----ENEQDETY 320
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
D T RL+KL++FQ +RHA+ FP +++ YSTCS+H ENE V+ +L
Sbjct: 321 DDT---RLSKLASFQFTIVRHAMMFPNAKKLTYSTCSVHPQENERVVVDLL 368
>gi|407037525|gb|EKE38676.1| methyltransferase, putative [Entamoeba nuttalli P19]
Length = 372
Score = 149 bits (375), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 93/241 (38%), Positives = 126/241 (52%), Gaps = 22/241 (9%)
Query: 66 RYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+Y R+NTL+ V ++ V+ D +P+L L P L + L+ Q K
Sbjct: 115 KYYRLNTLRTKVFPSISN-----KVEPDKFIPNLYKLTPPLSLPIDTLLS------QDKP 163
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S A L P +DAC+APGNKT HLA +M G I A + + +R L+ T+K
Sbjct: 164 SCFPAFILNPPENSICIDACAAPGNKTTHLATIMNNTGIIYAFDKDIKRAELLRTTVKNY 223
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
A NIEV+ GDFL D +D + V IL DPSCSGSG +L + DP
Sbjct: 224 QATNIEVICGDFLQSDIEDIRFENVTHILCDPSCSGSG--------ILERQLTKEKRDPA 275
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
RL LS+FQ K + HA+ F V+R+ YSTCS++ ENE V+K+VL SF + A
Sbjct: 276 ---RLRMLSSFQTKIVSHAMKFKNVQRITYSTCSVNNEENECVVKAVLDENPSFRLEPAF 332
Query: 306 P 306
P
Sbjct: 333 P 333
>gi|119494305|ref|XP_001264048.1| NOL1/NOP2/sun domain protein, putative [Neosartorya fischeri NRRL
181]
gi|119412210|gb|EAW22151.1| NOL1/NOP2/sun domain protein, putative [Neosartorya fischeri NRRL
181]
Length = 560
Score = 148 bits (374), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 125/380 (32%), Positives = 173/380 (45%), Gaps = 91/380 (23%)
Query: 8 GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDL------------MA 55
G+ N HPL + + HK ++ A+ VR SI DL A
Sbjct: 86 GIAANANHPL------RQAIERHKTRLKGEFAKARVRRGCASIPDLKAAVLREKQAAQSA 139
Query: 56 LYQTPDVPKPRYVRVNTLKMDVD-------------SAVLELGKQFVVQ--KDDLVPDLL 100
L + PR+VR+N L+ ++ +++ ELG++ + D VPDL+
Sbjct: 140 LGTSSTAVYPRWVRINNLRTTMEEQLQFTFKAYTRVNSLAELGEKDEAKLYVDPHVPDLV 199
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL-APKPGWK--VLDACSAPGNKTVHLAA 157
+ PG D P NG + LQ KAS A L W +LD C+APGNKT H+A+
Sbjct: 200 AVAPGVDFTSSPAYKNGQIILQDKASCFPAYLLLGDSEDWSGDLLDGCAAPGNKTTHMAS 259
Query: 158 LMK----GKG---KIVACELNKERVRRLKDTIKLSGAANI-EVLHG-DFLNLDPKDPAYS 208
L+ GKG I + + +K R + L+ + +GA +I VL G DFL LDP + ++
Sbjct: 260 LLAKHAAGKGVTHHIFSMDASKVRSKTLQKMVTAAGADDIVTVLQGQDFLALDPTEDRFA 319
Query: 209 EVRAILLDPSCSGSGTAAERLD---HLLPSHASGHTA----------------------- 242
V +LLDPSCSGSG R D LP+ AS T
Sbjct: 320 NVTGLLLDPSCSGSGIVG-RDDVPKLALPAAASTQTGKSQGKKRKRRHDEEEETQPGNVA 378
Query: 243 ----------DPTEM-------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
D E +RL KLS Q + + HALSFP RV YSTCSIH +EN
Sbjct: 379 TSASTSASATDENEFASATLDPDRLTKLSNLQARIVEHALSFPAATRVTYSTCSIHLIEN 438
Query: 286 EDVIKSVLP--IAMSFGFQL 303
E V+ VL +A S G+++
Sbjct: 439 EAVVSRVLASDVARSRGWRI 458
>gi|268533144|ref|XP_002631700.1| Hypothetical protein CBG20899 [Caenorhabditis briggsae]
Length = 789
Score = 148 bits (373), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 97/271 (35%), Positives = 133/271 (49%), Gaps = 42/271 (15%)
Query: 65 PRYVRVNTLKMDVDSAVLELG----------------------KQFVVQKDDLVPDLLIL 102
PRY R+NTLK V+ A+ L K+ + KD V +LLI
Sbjct: 461 PRYARINTLKWTVEEALKTLETEEWKILGTASVEKFPELVANMKEDEIYKDPHVENLLIF 520
Query: 103 PPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
P + H + ++ + LQ KAS + A L P+PG +V D C+APG KT H AA+M
Sbjct: 521 APNIQNFHEYWMVEQRYLILQDKASCLPAFLLNPRPGSQVFDTCAAPGMKTSHAAAIMDN 580
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
+GK+ A + +RV +K + S A GDFL D D +S+V+ ++DP CSG
Sbjct: 581 QGKVWAMDRAADRVATMKQLLDGSKVAIASAFCGDFLKTDVTDKKFSKVKFAIVDPPCSG 640
Query: 222 SG------------TAAERLDHLLPSHASGHTADPTEMERLN--KLSA-----FQKKALR 262
SG ERL+ L H E +N K++A FQ L+
Sbjct: 641 SGIVKRMDEITGGNAEKERLEKLKNLQVKRHEGLNLEQNNINSKKMAADYKLHFQAMILK 700
Query: 263 HALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
HAL PG++R VYSTCSIH+ ENE V+ VL
Sbjct: 701 HALKLPGLKRAVYSTCSIHEEENEQVVDEVL 731
>gi|378730095|gb|EHY56554.1| NOL1/NOP2/sun domain-containing protein [Exophiala dermatitidis
NIH/UT8656]
Length = 534
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 121/368 (32%), Positives = 169/368 (45%), Gaps = 78/368 (21%)
Query: 8 GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMA--LYQTPDV--P 63
G+ + HPL + + HK +Q + +R K +++DL L + P
Sbjct: 86 GIAASSSHPL------RQAIERHKARLQAEFTKARLRRKCATVDDLKRHLLKEKPPTHRS 139
Query: 64 KPRYVRVNTLKMDVD-------------SAVLELGKQFVVQK----DDLVPDLLILPPGC 106
+PR++R+NTLK +D + V E+ + K D +P+++ LPP
Sbjct: 140 QPRWIRINTLKTSIDEQLATSFNGFRRDATVAEVVESASTDKVLAIDQNIPNVIALPPEA 199
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKV-----LDACSAPGNKTVHLAALMKG 161
D+ G + LQ KAS A L + V +D C+APGNKT HLAA++
Sbjct: 200 DVTKTEAYKLGKLILQDKASCFPAYLLVGQGDGGVTIGDCIDGCAAPGNKTSHLAAILAS 259
Query: 162 KG----KIVACELNKERVRRLKDTIKLSGAANIEVL-HGDFLNLDPKDPAYSEVRAILLD 216
G +I ACE + R + LK ++ SGA ++VL DFL LDP+ P Y V +LLD
Sbjct: 260 SGHSTSRIYACERDATRSKILKSMMEKSGAEKVKVLFKQDFLALDPQSPKYKNVTHLLLD 319
Query: 217 PSCSGSG--------TAAERLD----------HL--LPSHASGHTADPTE---------- 246
PSCSGSG T A LD H L G TE
Sbjct: 320 PSCSGSGIVGREDVPTLALPLDPRQQKAQGGKHAGNLKKRKRGREEAQTERTIEHDSLEA 379
Query: 247 ---------MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPI-- 295
ERL KLSA Q + HALSFP R+ YSTCS+H ENE V+ +L
Sbjct: 380 EETKEAAPNQERLQKLSALQTMIVEHALSFPSATRITYSTCSLHVEENEAVVSRILSSKN 439
Query: 296 AMSFGFQL 303
A+S G+++
Sbjct: 440 AISRGWRV 447
>gi|410082595|ref|XP_003958876.1| hypothetical protein KAFR_0H03310 [Kazachstania africana CBS 2517]
gi|372465465|emb|CCF59741.1| hypothetical protein KAFR_0H03310 [Kazachstania africana CBS 2517]
Length = 488
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 103/300 (34%), Positives = 155/300 (51%), Gaps = 38/300 (12%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTP-DVPKPRYVRVNTLKMDVDSAVL-E 83
F++ +K + L +L ++ KV+ + +L+ + D+ R+ R+N L+ SAV+ E
Sbjct: 113 FVLRYKSRLHSELVKLKLKAKVRDLSELVDTGDSSNDITPVRWFRINPLRCPDASAVMKE 172
Query: 84 LGKQF-------------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVA 130
L K+F + D+ +P L + P + H L G + +Q +AS A
Sbjct: 173 LEKKFPQRVESWEGIVPGSIYHDEFIPYLFGIHPQDKITSHELYKQGRIIIQDRASCFPA 232
Query: 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKG-----KIVACELNKERVRRLKDTIKLS 185
L P K++DACSAPGNKT H+A+ M G G +I A E + ER + L+ IK++
Sbjct: 233 HILNPTLEDKIIDACSAPGNKTTHVASYMFGNGLVDDVRIFAFEKDPERAKVLQKMIKVA 292
Query: 186 GAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER-LDHLLPSHASGHTAD 243
G + I V GDF L + +V ++DPSCSGSG + +D L + D
Sbjct: 293 GCSKQISVNVGDFTKL-ATPSKFPDVTGFIVDPSCSGSGIFGRKYIDSLNRQKKTQDIVD 351
Query: 244 ---PTEME------------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDV 288
P E E RL+KLS+FQ + ++HA+SFP +R+VYSTCSIH ENE V
Sbjct: 352 NGVPDEQEEMAEKENGNLQERLSKLSSFQFQVVKHAMSFPKAKRIVYSTCSIHAEENERV 411
>gi|342321102|gb|EGU13039.1| Nucleus protein, putative [Rhodotorula glutinis ATCC 204091]
Length = 648
Score = 147 bits (372), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 105/273 (38%), Positives = 139/273 (50%), Gaps = 51/273 (18%)
Query: 66 RYVRVNTLKMDVDSAV--LELG-----------------KQFVVQKDDLVPDLLILPPGC 106
R++RVNTL+ V+ AV E G K V D + LL LP
Sbjct: 209 RWMRVNTLRWSVEQAVEWFEKGGWEMFEDVEEMLAAAQSKPKVFALDAHIEPLLALPASV 268
Query: 107 DLHVHPLIVNGCVFLQGKASSMVA-AALAP----------------------KPGWKVLD 143
L +G + Q KAS M A LAP G +VLD
Sbjct: 269 SLPTMSAYQDGRLLAQDKASCMPAWVLLAPILADAEEALTNGLDVEGEEKKRGKGLRVLD 328
Query: 144 ACSAPGNKTVHLAALMKGK---GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
A +APGNKT AAL+ G+ GK+ ACE ++ R + LKD +K + A N++ ++ DFL+L
Sbjct: 329 ATAAPGNKTTMAAALVAGEPINGKVTACERDQGRFKVLKDMLKRADAKNVQPMNVDFLSL 388
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
P DP V +L+DPSCSGSG + RLDHL+PS + ++ R+ LS FQ
Sbjct: 389 KPDDPKLKNVSHLLVDPSCSGSGIPS-RLDHLVPS-----APEEEQLSRIRALSNFQIAI 442
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L HAL F G +RVVYSTCSI + E+E V+ VL
Sbjct: 443 LSHALRFSGAKRVVYSTCSIWEQEDEGVVMRVL 475
>gi|299749810|ref|XP_001836347.2| williams-Beuren syndrome critical region protein 20 copy A
[Coprinopsis cinerea okayama7#130]
gi|298408609|gb|EAU85531.2| williams-Beuren syndrome critical region protein 20 copy A
[Coprinopsis cinerea okayama7#130]
Length = 486
Score = 147 bits (371), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 106/309 (34%), Positives = 149/309 (48%), Gaps = 46/309 (14%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ HK + +L ++ V S L+ PRYVR+NT D A
Sbjct: 109 GPIKQAVLRHKTRLHGEFQKLKIKRGVTSNAQLVQRADERAESIPRYVRINTSLWTTDKA 168
Query: 81 VLE-LGKQFVVQ------------KDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
VL + + F + KD +PDLL P P ++G +Q KAS
Sbjct: 169 VLYYVSRGFTLNDTLNSSDHKAFVKDPHIPDLLAFAPLTSFVEDPAYLDGRAIIQDKASC 228
Query: 128 MVAAALAPKPGWK---VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
A L P P + V+DA +APGNKT HL+ALM KGK+ A E +K R L+ +
Sbjct: 229 FPAFVLNP-PATEDSVVIDATAAPGNKTSHLSALMGNKGKLYAFERDKRRFLTLQKMLNT 287
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+ N ++ DFL +DP+D + V I GSG RLDHL+P+ + + D
Sbjct: 288 AQCRNAIPINADFLTIDPEDNKFRPVTHI-------GSGIV-NRLDHLIPT-GTRKSTDK 338
Query: 245 TEM--------------------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
E ERL KL+ FQ K ++HA+ FP VER+VYSTCSIH E
Sbjct: 339 LETSRLLHTVLILTAIEEEDIPNERLAKLATFQLKMIQHAMKFPNVERIVYSTCSIHATE 398
Query: 285 NEDVIKSVL 293
NE V+++ L
Sbjct: 399 NEHVVRAAL 407
>gi|405952994|gb|EKC20735.1| Putative methyltransferase NSUN5 [Crassostrea gigas]
Length = 599
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 91/240 (37%), Positives = 128/240 (53%), Gaps = 30/240 (12%)
Query: 65 PRYVRVNTLKMDVDSAV----------LELGKQF-----VVQ--------KDDLVPDLLI 101
PRYVRVN +K VD + L + F V Q +D + DLL+
Sbjct: 138 PRYVRVNLIKTSVDEVINSFVDKGWTLLHVPTDFSSFKEVCQNLDENQFLRDFHLDDLLV 197
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
P D H L+ +G V LQ KAS + A L+P G V+D+C+APGNKT H+A+LM
Sbjct: 198 FPAHTDFHDSRLVQDGRVILQDKASCLPAHILSPPEGAVVVDSCAAPGNKTSHMASLMGN 257
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
KG I A + ++R+ L++ ++ +G + DFL + Y +V +++DPSCSG
Sbjct: 258 KGTIYAFDHKEDRIEVLQERMEGAGVSCKVARCMDFLRVKTDSQTYRDVEYVMVDPSCSG 317
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIH 281
SG + RLD L AS RL +L Q + LRHA SFP V+++VYSTCSI+
Sbjct: 318 SGIVS-RLDSLTNDDAS------VSQHRLGQLHKLQAQILRHAFSFPKVKKIVYSTCSIN 370
>gi|327293461|ref|XP_003231427.1| hypothetical protein TERG_08212 [Trichophyton rubrum CBS 118892]
gi|326466543|gb|EGD91996.1| hypothetical protein TERG_08212 [Trichophyton rubrum CBS 118892]
Length = 527
Score = 147 bits (370), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 123/342 (35%), Positives = 165/342 (48%), Gaps = 68/342 (19%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPK---PRYVRVNTLKMDVD------- 78
HK + L +L VR S E+L L Q V K PR++R+N + +D
Sbjct: 100 HKSRLNSELTKLRVRRGCASKEELKHKLVQDQQVMKTFSPRWIRINNVLTTLDREMKSTF 159
Query: 79 ------SAVLELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
S++ EL + +K D+ +PDL+ + D+ G + LQ KAS
Sbjct: 160 AGYESVSSLSELAEAIADEKKYCLDEHIPDLMAISRDIDITSSYAYKEGRLILQDKASCF 219
Query: 129 VAAAL-APKPG-WK--VLDACSAPGNKTVHLAALM-----KGKGKIVACELNKERVRRLK 179
A L PG WK ++D C+APGNKT HLA+L+ K K ++ + + + R + L+
Sbjct: 220 PAYLLLGDHPGRWKGDLIDGCAAPGNKTTHLASLLSSAPEKQKSRVFSLDASHSRSKILQ 279
Query: 180 DTIKLSGAANI-EVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSG-TAAERLDHL-LPS 235
+K +GA+NI VL G DFL LDP D + V A+LLDPSCSGSG T E + L LP
Sbjct: 280 TMVKKAGASNIVTVLPGQDFLALDPTDTRFQHVTALLLDPSCSGSGITKREDVPQLDLPK 339
Query: 236 HASGHT--------------------------ADPT------EMERLNKLSAFQKKALRH 263
S T PT E ERL KL+ Q + + H
Sbjct: 340 SKSELTLATTAGGKGSKNRKRKRENPADSSSPGSPTTEAKEDESERLAKLANLQSQIVEH 399
Query: 264 ALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
A FP RV YSTCSIH ENEDV+ VL IA S G++L
Sbjct: 400 AFVFPAATRVTYSTCSIHHEENEDVVARVLASSIAKSRGWRL 441
>gi|449296021|gb|EMC92041.1| hypothetical protein BAUCODRAFT_96705 [Baudoinia compniacensis UAMH
10762]
Length = 577
Score = 146 bits (369), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 103/319 (32%), Positives = 150/319 (47%), Gaps = 79/319 (24%)
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQF------------------VVQKDDLVPDLLILPPG 105
+PR++R+NTLK + A+ ++ ++ D+ +PDL+ + G
Sbjct: 153 RPRWIRINTLKTTLAQALASTFAEYEQVSRLSDVLEAPPRDAKILHIDEHIPDLIAISVG 212
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALMK---- 160
DL G + LQ KAS A L P+PG V+DAC+APGNKT HLAAL
Sbjct: 213 IDLTTSKAYRAGELILQDKASCFPAYLLDPQPGDGDVIDACAAPGNKTTHLAALSTTLPG 272
Query: 161 ------GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRA 212
+ +++ACE + R L+ + L+GA + + DF+ +DP P ++ V+A
Sbjct: 273 ETCNRGSENRVIACEKDATRSETLRKMLLLAGADRVVSVKARQDFMKMDPTTPEFANVKA 332
Query: 213 ILLDPSCSGSGTA---------------AERLD-------------------HLLPSHA- 237
+LLDPSCSGSG AE D +PS
Sbjct: 333 LLLDPSCSGSGIVGRDGVGIPIHLPNVDAEEGDTNVGRKRSKKRKRGRDDDPKTIPSEED 392
Query: 238 SGHTADPTEME-----------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
+ HT D +E + RL LSAFQ + L HA+SFP +R+ YSTCSIH ENE
Sbjct: 393 TAHTVDMSEEQPNIEEGEKLKSRLANLSAFQLRLLEHAMSFPTAQRITYSTCSIHAEENE 452
Query: 287 DVIKSVL--PIAMSFGFQL 303
V+ L +A G+++
Sbjct: 453 HVVIRALYSAVARKCGWRI 471
>gi|403217119|emb|CCK71614.1| hypothetical protein KNAG_0H02000 [Kazachstania naganishii CBS
8797]
Length = 498
Score = 146 bits (368), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 112/327 (34%), Positives = 162/327 (49%), Gaps = 55/327 (16%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQ-TPDVPKPRYVRVNT 72
+HP+ + F++ +K + LA++ V+ KVK + L T D+ R+ RVN
Sbjct: 107 KHPI------KMFVLKYKTRLNAELAKMKVKLKVKDLSQLTDSDDLTNDITPVRWFRVNP 160
Query: 73 LKMD----VDSAVLELGKQFV-------------VQKDDLVPDLLILPPGCDLHVHPLIV 115
L+ V S V EL K+F + D+ +P+L + P + H L
Sbjct: 161 LRCTAEKPVQSVVTELRKKFTEKVDSWKDVVPGSIYYDEYIPNLFCVHPQDKITSHELYK 220
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM--------KGKGKIVA 167
G + +Q +AS A L PK V+DAC+APGNKT HLAA M K K +I A
Sbjct: 221 QGKIIIQDRASCFPAHILNPKSDDIVIDACAAPGNKTTHLAAHMFQDKTADEKPKVQIYA 280
Query: 168 CELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTA 225
E + ER + L IK++G + IEV+ GDF L P+ A V +++DPSCSGSG
Sbjct: 281 FEKDPERAQVLNKMIKIAGCSKEIEVIVGDFTKLATPQ--ACPNVNGLIVDPSCSGSGIF 338
Query: 226 AER----LDH---------------LLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
+ ++H +P D RL+KLS+FQ + +++ALS
Sbjct: 339 GRKYIDSINHKKTDEEKEEEERELDAVPEEQEEQELDDNLKTRLSKLSSFQFQIVKYALS 398
Query: 267 FPGVERVVYSTCSIHQVENEDVIKSVL 293
FP +VVYSTCSIH ENE V+ +L
Sbjct: 399 FPQATKVVYSTCSIHAEENERVVIDLL 425
>gi|344304182|gb|EGW34431.1| hypothetical protein SPAPADRAFT_149300 [Spathaspora passalidarum
NRRL Y-27907]
Length = 482
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 95/287 (33%), Positives = 149/287 (51%), Gaps = 26/287 (9%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD-------- 78
+ HK + +L ++ KVK + +L + + P R+ R+NT+K + +
Sbjct: 102 FLEHKTRLVAEFTKLKLKYKVKDVSELAVEEENDETP-VRWFRINTIKCNSEDFFDKHTW 160
Query: 79 -------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAA 131
+++ ++ ++ KDD +P+L + P L +G V +Q +AS A
Sbjct: 161 FAKLQPVNSIKDITDCGMIYKDDYIPNLYGIHPKEKLTSTDAYKSGEVIIQDRASCFPAH 220
Query: 132 ALAPKPGW--KVLDACSAPGNKTVHLAALMKGKGKIV-ACELNKERVRRLKDTIKLSGAA 188
L + +V+DAC+APGNKT H A+ + G IV A E + +R + LK ++
Sbjct: 221 ILNEINDYHDQVIDACAAPGNKTTHAASYLVKPGSIVYAFERDAKRAQILKKMCAIATGD 280
Query: 189 N--IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
I + H DF + P D + EV +++DPSCSGSG L L +A D +
Sbjct: 281 KDLIHITHCDFTSTTPSD--FPEVTGLVVDPSCSGSGIFGRALQDSLNDNAG---EDEVD 335
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ERLNKL+ FQ K ++HA+SFP +VVYSTCSIH ENE V+ +L
Sbjct: 336 LERLNKLAGFQFKIVKHAMSFPKARKVVYSTCSIHATENEQVVVDLL 382
>gi|302652941|ref|XP_003018309.1| NOL1/NOP2/sun domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291181937|gb|EFE37664.1| NOL1/NOP2/sun domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 528
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 121/343 (35%), Positives = 164/343 (47%), Gaps = 69/343 (20%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPK---PRYVRVNTLKMDVD------- 78
HK + L +L VR S E+L L Q V K PR++R+N + +D
Sbjct: 100 HKSRLNAELTKLRVRRGCASKEELKHKLVQDQQVMKTFSPRWIRINNVLTTLDHEMKSTF 159
Query: 79 ------SAVLELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
S++ EL + +K D+ +PDL+ + D+ G + LQ KAS
Sbjct: 160 AGYESASSLSELAEATPDEKKYCLDEHIPDLMAISRDIDITSSSAYKEGRLILQDKASCF 219
Query: 129 VAAAL-APKPG-WK--VLDACSAPGNKTVHLAALM-----KGKGKIVACELNKERVRRLK 179
A L PG WK ++D C+APGNKT HLA+L+ K K ++ + + + R + L+
Sbjct: 220 PAYLLLGDHPGQWKGDLIDGCAAPGNKTTHLASLLSSTPEKQKNRVFSLDASHSRSKILQ 279
Query: 180 DTIKLSGAANI-EVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSG-TAAERLDHL-LPS 235
+K +GA+NI VL G DFL LDP D + V A+LLDPSCSGSG T E + L LP
Sbjct: 280 TMVKKAGASNIVTVLPGQDFLALDPADTRFQHVTALLLDPSCSGSGITKREDVPQLDLPK 339
Query: 236 HASGHT---------------------------------ADPTEMERLNKLSAFQKKALR 262
S T A E ERL KL+ Q + +
Sbjct: 340 SKSELTLATTGSSKGSKNRKRKRENPADSSSPGSSPTTEAKEDESERLAKLANLQSQIVE 399
Query: 263 HALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
HA FP RV YSTCSIH ENEDV+ VL IA + G++L
Sbjct: 400 HAFGFPAATRVTYSTCSIHHKENEDVVARVLASSIAKNLGWRL 442
>gi|50294476|ref|XP_449649.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528963|emb|CAG62625.1| unnamed protein product [Candida glabrata]
Length = 492
Score = 145 bits (367), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 108/345 (31%), Positives = 173/345 (50%), Gaps = 53/345 (15%)
Query: 3 EARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDV 62
+A+RI + +HP+ + +++ +K A+ +L ++ K+ + ++ D
Sbjct: 100 KAKRIQMG---KHPI------KNYVLKYKNALNAEFVKLKIKLKITDLSQVVDKDDAADD 150
Query: 63 PKP-RYVRVNTLKM---DVDSAVLELGKQF-------------VVQKDDLVPDLLILPPG 105
P R++R+N L++ D D + EL K+F + D+ +P+L +
Sbjct: 151 MTPVRWIRINPLRISNHDTDQVLNELKKKFPTRVNTWKDIIPGSIYYDEFIPNLYGIHIS 210
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG---- 161
+ H L G + +Q +AS A L P V+DACSAPGNKT H+AA + G
Sbjct: 211 DKITSHELYKQGKIIIQDRASCFPAHILNPSADDVVIDACSAPGNKTTHVAAHIFGDPEN 270
Query: 162 ----KGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
+I A E + ER + L+ IK +G NI+V GDF + YS+V +LD
Sbjct: 271 PRNDNVQIYAFEKDPERAQILQKMIKTAGCHKNIDVNVGDFTQI-ATPSKYSDVTGFILD 329
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTAD-PTE--------------MERLNKLSAFQKKAL 261
PSCSGSG + +L +H + P E ERL+KL++FQ + +
Sbjct: 330 PSCSGSGIFGRKSVDILNNHGKKSNDEVPDENDAEETTDSKNEQLKERLSKLASFQFQIV 389
Query: 262 RHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQLA 304
RHA+SFP +++VYSTCSIH ENE V+ +L S+G+++A
Sbjct: 390 RHAMSFPNAKKIVYSTCSIHAEENERVVIDLLLDKKVQSWGWRVA 434
>gi|429854950|gb|ELA29931.1| nol1 nop2 sun domain-containing protein [Colletotrichum
gloeosporioides Nara gc5]
Length = 573
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 114/345 (33%), Positives = 160/345 (46%), Gaps = 71/345 (20%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT---PDVPKPRYVRVNTLKMDVDSAVLELGK 86
HK + L + +R ++ S++ L A P+ PR++RVN LK DV++ + K
Sbjct: 96 HKARLTSELTRARLRRRMPSLDALRADVNANADPEGRHPRWIRVNHLKSDVETQLETTFK 155
Query: 87 QF---------------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAA 131
F V D VP+LL PG D+ NG V LQ KAS A
Sbjct: 156 GFERVFSIADVTASSAKAVFIDPHVPNLLATSPGTDVTKSTAYQNGDVILQDKASCFPAY 215
Query: 132 ALAPKP-GWKVLDACSAPGNKTVHLAALMKG--------KGKIVACELNKERVRRLKDTI 182
L P P V+D+C+APGNKT HLAA+MKG K I A E + +R + L+ +
Sbjct: 216 LLDPHPQDGDVIDSCAAPGNKTTHLAAVMKGHQPEQGAAKQTIFAFERDPKRAQTLEKMV 275
Query: 183 KLSGAANIEV--LHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL------- 233
+++G+ L DFL +DP+ AY++V A+LLDPSCSGSG L
Sbjct: 276 RIAGSRGTTKIGLGQDFLEVDPQAEAYADVGALLLDPSCSGSGIVGRDSMPELHLPEVSG 335
Query: 234 PSHASGHT--------------------------ADPTEME-------RLNKLSAFQKKA 260
P + G T + E++ RLN L+ FQ
Sbjct: 336 PGGSKGKTKGTKPDVKKRKREEKDEAKQVMVDDDGNAVEIQSEQELQKRLNSLAGFQLTL 395
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
L HA+ FP +++ YSTCSIH ENE V+ L IA G+++
Sbjct: 396 LLHAMRFPSAKKITYSTCSIHAEENEGVVMKALESKIAKERGWRV 440
>gi|190347500|gb|EDK39780.2| hypothetical protein PGUG_03877 [Meyerozyma guilliermondii ATCC
6260]
Length = 514
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 102/307 (33%), Positives = 161/307 (52%), Gaps = 31/307 (10%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA ++ +K +Q L +L +R KVK++ DL + + P R++R+NT+ +
Sbjct: 163 PIKDA---VLENKTRLQAELIKLKLRYKVKTLADLPNTVEQDETP-IRWIRINTIVASEE 218
Query: 79 SAVLE--LGK-QFV----------VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+ E K +FV + +D +V +L + P + NG + +Q +A
Sbjct: 219 EVMREDFFEKLKFVDSTDEIASGKIYRDTIVTNLYGIHPSEKITNTEAYKNGKIIIQDRA 278
Query: 126 SSMVAAALAPKPGWK---VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
S A L P + V+DAC+APGNKT HLA+ + G + A E + +RV+ LK
Sbjct: 279 SCFPAQILNGDPENQHEVVIDACAAPGNKTTHLASFLPKNGVVHAFERDDKRVKTLKMMT 338
Query: 183 KLSGAAN---IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+ N I++ H DF+ + P D + +V I++DPSCSGSG L+ S
Sbjct: 339 SKALGPNKDLIQITHADFMTIIPSD--FPKVTGIVVDPSCSGSGIFGRALE----DAQSE 392
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAM 297
+ + ERL KL++FQ K ++H + FPG ++VYSTCSIH ENE V+ +L P
Sbjct: 393 QDRETIDTERLTKLASFQFKIVKHTMKFPGARKIVYSTCSIHPHENERVVMDLLADPEVK 452
Query: 298 SFGFQLA 304
G++LA
Sbjct: 453 EQGWKLA 459
>gi|67477207|ref|XP_654109.1| Putative methyltransferase NSUN5 [Entamoeba histolytica HM-1:IMSS]
gi|56471131|gb|EAL48723.1| Putative methyltransferase NSUN5 [Entamoeba histolytica HM-1:IMSS]
gi|449708881|gb|EMD48256.1| methyltransferase NSUN5, putative [Entamoeba histolytica KU27]
Length = 372
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 92/241 (38%), Positives = 125/241 (51%), Gaps = 22/241 (9%)
Query: 66 RYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+Y R+NTL+ V ++ V+ D +P+L L P L + L+ Q K
Sbjct: 115 KYYRLNTLRTKVFPSISN-----KVEPDKFIPNLYKLTPPLSLPIDTLLS------QDKP 163
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S A L P +DAC+APGNKT HLA +M G I A + + +R L+ T+K
Sbjct: 164 SCFPAFILNPPENSICIDACAAPGNKTTHLATIMNNTGIIYAFDKDIKRAELLRTTVKNY 223
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
A NIEV+ GDFL D +D + V IL DPSCSGSG +L + DP
Sbjct: 224 QATNIEVICGDFLQSDIEDIRFENVTHILCDPSCSGSG--------ILERQLTKEKRDPA 275
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
RL LS+FQ K + HA+ F V+ + YSTCS++ ENE V+K+VL SF + A
Sbjct: 276 ---RLRMLSSFQTKIVSHAMKFKNVQCITYSTCSVNNEENECVVKAVLDENPSFRLEPAF 332
Query: 306 P 306
P
Sbjct: 333 P 333
>gi|257216462|emb|CAX82436.1| Putative methyltransferase NSUN5 [Schistosoma japonicum]
Length = 575
Score = 145 bits (365), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 98/296 (33%), Positives = 145/296 (48%), Gaps = 38/296 (12%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPD-LLILPPGC 106
++ D++ +T + + +Y R T V +L + +F++ D P LL+ G
Sbjct: 170 TLSDVVEKLETCGLKQVQYNRSETSYRKFRKKVRKLNRGEFLL--DYHFPHMLLVFSSGT 227
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
L+ L + C+ +Q KAS L P P VLDAC+APGNKT L ++M K +
Sbjct: 228 ALYELELYKSRCILIQDKASCFSTEILQPDPNSDVLDACAAPGNKTSQLISMMSSKSTVF 287
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLH--------------------------GDFLNL 200
A + + R + L + + +G + V+ DFL++
Sbjct: 288 AFDRDPNRFQCLTENLVANGVDRLSVIDWPNSDSKHNKHRKSLQSSQPFVEASCTDFLSV 347
Query: 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLD-------HLLPSHASGHTADPTEMERLNKL 253
DP DP +S V++ILLDPSCSGSG + + D L S T + + RL +L
Sbjct: 348 DPYDPKFSNVQSILLDPSCSGSGLSIRQPDGEQQLKNSQLKGDYSTDTYNEEYLSRLKRL 407
Query: 254 SAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
S Q LRHAL+FP V+R+VYSTCSIH ENE V++ +S F L T +PN
Sbjct: 408 SNLQAMLLRHALNFPNVQRIVYSTCSIHPEENEAVVQENAN-RVSDKFYLETIWPN 462
>gi|294656172|ref|XP_458422.2| DEHA2C16874p [Debaryomyces hansenii CBS767]
gi|199430915|emb|CAG86504.2| DEHA2C16874p [Debaryomyces hansenii CBS767]
Length = 493
Score = 145 bits (365), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 160/313 (51%), Gaps = 35/313 (11%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA ++ HK +Q +L ++ K KS EDL + D R+ RVNT+K +
Sbjct: 100 PIKDA---ILQHKTRLQAEFTKLKLKYKAKSAEDLPTSVSSDDETPIRWFRVNTIKTTPE 156
Query: 79 S--------------AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+ +E+ + + DD +P+L + P L + G V +Q +
Sbjct: 157 KFFQDHPFFAKLEPISSIEIKETGFIYTDDYIPNLYGIHPKEKLTSTAAYLKGEVIIQDR 216
Query: 125 ASSMVAAALAPKPG---WKVLDACSAPGNKTVHLAALM-KGKGKIV-ACELNKERVRRLK 179
AS A L P +++D+C+APGNKT H A+ + + + +V A E + RV+ LK
Sbjct: 217 ASCFPAHILNDDPSDNHIEIIDSCAAPGNKTTHCASYLPRSEDSVVYAFERDSNRVKVLK 276
Query: 180 DTIKLSGAAN----IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
+ + I++ H DF + P+D + V +++DPSCSGSG ++ +
Sbjct: 277 TMCEKATGIKYKNLIQITHADFTSTKPQD--FPCVTGLVVDPSCSGSGIFGRAIED---A 331
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL-- 293
+ + + ERLN+L+ FQ K ++HALSFP +VVYSTCSIH ENE V+ +L
Sbjct: 332 QSQEQEKEEIDTERLNRLAGFQFKIMKHALSFPKARKVVYSTCSIHPHENERVVVDLLMD 391
Query: 294 -PIAMSFGFQLAT 305
I S G+QLA+
Sbjct: 392 KEIKAS-GWQLAS 403
>gi|70996644|ref|XP_753077.1| NOL1/NOP2/sun domain protein [Aspergillus fumigatus Af293]
gi|66850712|gb|EAL91039.1| NOL1/NOP2/sun domain protein, putative [Aspergillus fumigatus
Af293]
Length = 559
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 170/380 (44%), Gaps = 91/380 (23%)
Query: 8 GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMA------------ 55
G+ N HPL + + HK + + VR SI DL A
Sbjct: 86 GIAANANHPL------RQAIERHKTRLNGEFVKARVRRGCASIPDLKAAVLREKQAAQGA 139
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV--------QKDDL-------VPDLL 100
+ + PR+VR+N L+ ++ + K + +KD+ VPDL+
Sbjct: 140 VGTSSTAVYPRWVRINNLRTTMEEQLQSTFKSYTRVNSLAELGEKDEAKLYVDPHVPDLV 199
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL-APKPGWK--VLDACSAPGNKTVHLAA 157
+ PG D P NG + LQ KAS A L W +LD C+APGNKT H+A+
Sbjct: 200 AVAPGVDFTSSPAYKNGQIILQDKASCFPAYLLLGDSEDWSGDLLDGCAAPGNKTTHMAS 259
Query: 158 LMK--GKGK-----IVACELNKERVRRLKDTIKLSGAANI-EVLHG-DFLNLDPKDPAYS 208
L+ G+ IV+ + +K R + L+ + +GA NI VL G DFL LDP + ++
Sbjct: 260 LLAKHAAGRDVTRHIVSMDASKVRSKTLQKMVSAAGADNIVTVLQGQDFLALDPTEERFA 319
Query: 209 EVRAILLDPSCSGSGTAAERLD---HLLPSHASGHTA----------------------- 242
V +LLDPSCSGSG R D LP+ AS T+
Sbjct: 320 NVTGLLLDPSCSGSGIVG-RDDVPKLALPAAASTPTSKSQGKKRKRRHDDEEETQPGNAA 378
Query: 243 ----------DPTEM-------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
D E+ +RL KLS Q + + HALSFP RV YSTCSIH +EN
Sbjct: 379 AATSTSASATDENEIASATLDRDRLTKLSNLQARIVEHALSFPAATRVTYSTCSIHLIEN 438
Query: 286 EDVIKSVLP--IAMSFGFQL 303
E V+ VL +A S G+++
Sbjct: 439 EAVVSRVLASDVARSRGWRI 458
>gi|255722339|ref|XP_002546104.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136593|gb|EER36146.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 485
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 104/313 (33%), Positives = 158/313 (50%), Gaps = 36/313 (11%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKP-RYVRVNTLKMDV 77
P+ DA + +K +Q +L ++ KVKS D + +T D P R+ R+NT+K+D
Sbjct: 98 PIKDA---FLSNKTRLQAEFTKLKLKYKVKSA-DQLPTKETDDDETPIRWFRINTIKIDP 153
Query: 78 D---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
+ S++ E+ + V+ DD +P+L + P + G + +Q
Sbjct: 154 ERFYVKHPFFKQLQPVSSLEEIKEPGVIYSDDYIPNLFGVHPREKITSTEAYKLGEIIIQ 213
Query: 123 GKASSMVAAALAPKPG---WKVLDACSAPGNKTVHLAALMKGKGKIV-ACELNKERVRRL 178
+AS + L P +V+DAC+APGNKT H AA + +V A E + +RV+ L
Sbjct: 214 DRASCFPSHILNSDPKDIHTQVIDACAAPGNKTTHAAAHLPNSESVVYAFERDSKRVQIL 273
Query: 179 KDTIKLSGAAN----IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
K + + N I++ H DF P D +++V +++DPSCSGSG L+
Sbjct: 274 KTMCEKATGKNKKKLIQITHADFTTTKPDD--FADVTGMVVDPSCSGSGIFGRALEDSYN 331
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL- 293
S + ERL KLS FQ ++HALSFP +VVYSTCS+H ENE V+ +L
Sbjct: 332 EQES----ETVNTERLAKLSGFQFAIMKHALSFPSARKVVYSTCSVHVQENERVVIDLLS 387
Query: 294 -PIAMSFGFQLAT 305
P G+ LAT
Sbjct: 388 DPEVRKRGWTLAT 400
>gi|290993041|ref|XP_002679142.1| NOL1/NOP2/sun family protein [Naegleria gruberi]
gi|284092757|gb|EFC46398.1| NOL1/NOP2/sun family protein [Naegleria gruberi]
Length = 463
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 102/279 (36%), Positives = 143/279 (51%), Gaps = 44/279 (15%)
Query: 57 YQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQF-----------------VVQKDDLV 96
+ P++ RYVRVNTLK +V + ELG ++ +V+ + L
Sbjct: 162 HDNPEIELIRYVRVNTLKTTKEEVINKFSELGYEYRPVGLDKTDDFDKNEKSIVEDNHLT 221
Query: 97 PDLLIL-PPGCDLHVHPLIVNGCVFLQGKASS----MVAAALAPKPGWK--VLDACSAPG 149
D+L L P LH +I + + Q K+S ++ L K G ++DACSAPG
Sbjct: 222 NDVLALYPSNVTLHDLEMIKSYEIIAQDKSSCFPPFLIHKELGGKLGKNDCLIDACSAPG 281
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
NKT +LAAL +I A E NK R LK+ + L+GA+N+E DFL +P DP +
Sbjct: 282 NKTCYLAALFPS-NQIYAYERNKNRYETLKNRMVLAGASNVECKLDDFLQTNPSDPKFKN 340
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269
V+AI+LDPSCSGSG GH + + ERL L FQ K L H +FP
Sbjct: 341 VKAIMLDPSCSGSGI--------------GH-GNSIKKERLLSLQQFQLKLLTHCFNFPN 385
Query: 270 VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
V+ + YSTCS+ + ENE V + L A + F++ FP
Sbjct: 386 VQFISYSTCSVCEEENECVTEMGLK-ASNGAFEVVHTFP 423
>gi|159131813|gb|EDP56926.1| NOL1/NOP2/sun domain protein, putative [Aspergillus fumigatus
A1163]
Length = 559
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 122/380 (32%), Positives = 170/380 (44%), Gaps = 91/380 (23%)
Query: 8 GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMA------------ 55
G+ N HPL + + HK + + VR SI DL A
Sbjct: 86 GIAANANHPL------RQAIERHKTRLNGEFVKARVRRGCASIPDLKAAVLREKQAAQGA 139
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV--------QKDDL-------VPDLL 100
+ + PR+VR+N L+ ++ + K + +KD+ VPDL+
Sbjct: 140 VGTSSTAVYPRWVRINNLRTTMEEQLQSTFKSYTRVNSLAELGEKDEAKLYVDPHVPDLV 199
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL-APKPGWK--VLDACSAPGNKTVHLAA 157
+ PG D P NG + LQ KAS A L W +LD C+APGNKT H+A+
Sbjct: 200 AVAPGVDFTSSPAYKNGQIILQDKASCFPAYLLLGDSEDWSGDLLDGCAAPGNKTTHMAS 259
Query: 158 LMK--GKGK-----IVACELNKERVRRLKDTIKLSGAANI-EVLHG-DFLNLDPKDPAYS 208
L+ G+ IV+ + +K R + L+ + +GA NI VL G DFL LDP + ++
Sbjct: 260 LLAKHAAGRDVTRHIVSMDASKVRSKTLQKMVSAAGADNIVTVLQGQDFLALDPTEERFA 319
Query: 209 EVRAILLDPSCSGSGTAAERLD---HLLPSHASGHTA----------------------- 242
V +LLDPSCSGSG R D LP+ AS T+
Sbjct: 320 NVTGLLLDPSCSGSGIVG-RDDVPKLALPAAASTPTSKSQGKKRKRRHDDEEETQPGNAA 378
Query: 243 ----------DPTEM-------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
D E+ +RL KLS Q + + HALSFP RV YSTCSIH +EN
Sbjct: 379 AATSTSASATDENEIASATLDRDRLTKLSNLQARIVEHALSFPAATRVTYSTCSIHLIEN 438
Query: 286 EDVIKSVLP--IAMSFGFQL 303
E V+ VL +A S G+++
Sbjct: 439 EAVVSRVLASDVARSRGWRI 458
>gi|378754789|gb|EHY64818.1| hypothetical protein NERG_02221 [Nematocida sp. 1 ERTm2]
Length = 368
Score = 144 bits (364), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 94/249 (37%), Positives = 126/249 (50%), Gaps = 24/249 (9%)
Query: 58 QTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNG 117
TP P+Y+R+NTLK ++ + L + +P + + G
Sbjct: 107 NTPKDTTPQYIRINTLKA-TETVISSLSTEVTC-----IPHVYKSLERVNWSKLVSFQQG 160
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
F+Q +S M A L P VLDAC+APGNKT HLA ++ + A E + +R
Sbjct: 161 LFFIQDLSSCMPAYVLNPPSNTVVLDACAAPGNKTTHLA-MISPSSTVYAIEKDIDRYTT 219
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
L++ ++ SGA NI +HGDFL + V IL+DPSCSGSG
Sbjct: 220 LREMVEKSGAENIVTIHGDFLGIS--HGTLPGVEYILVDPSCSGSGM------------- 264
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
H + EMERL L AFQ KAL AL +PGV+RVVYSTCSI++ ENE V+ VL
Sbjct: 265 --HPGEEKEMERLKGLCAFQVKALSMALGYPGVKRVVYSTCSIYEEENEAVVDEVLKAHP 322
Query: 298 SFGFQLATP 306
F + A P
Sbjct: 323 GFMVERALP 331
>gi|398365407|ref|NP_014376.3| hypothetical protein YNL022C [Saccharomyces cerevisiae S288c]
gi|1730712|sp|P53972.1|YNC2_YEAST RecName: Full=Uncharacterized protein YNL022C
gi|1301853|emb|CAA95884.1| unnamed protein product [Saccharomyces cerevisiae]
gi|151944502|gb|EDN62780.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|285814629|tpg|DAA10523.1| TPA: hypothetical protein YNL022C [Saccharomyces cerevisiae S288c]
gi|349580906|dbj|GAA26065.1| K7_Ynl022cp [Saccharomyces cerevisiae Kyokai no. 7]
gi|392296967|gb|EIW08068.1| hypothetical protein CENPK1137D_2655 [Saccharomyces cerevisiae
CEN.PK113-7D]
Length = 490
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 159/315 (50%), Gaps = 44/315 (13%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDL-MALYQTPDVPKPRYVRVNTLKM-- 75
P+ D +++ K + + +L ++ KV+ + +L ++ + D+P R++R+N LK
Sbjct: 109 PIKD---YVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHP 165
Query: 76 --DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+ + + EL K+F ++ D+ +P+L + P + H L +G +
Sbjct: 166 NGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKII 225
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KGKGKIVACELNKER 174
+Q +AS A L P P V+D+CSAPGNKT H A+ + +I A E + ER
Sbjct: 226 IQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPER 285
Query: 175 VRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL---- 229
+ L+ IK++G + NI V GDF L + Y +V ++DPSCSGSG +
Sbjct: 286 AKVLQKMIKIAGCSPNISVNVGDFTKLATPE-KYKDVTCFIVDPSCSGSGIFGRKFFDSF 344
Query: 230 -----------DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTC 278
++P A RL KLS+FQ + ++HA+SFP +++VYSTC
Sbjct: 345 NRRKIDDKDDDGGIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKIVYSTC 404
Query: 279 SIHQVENEDVIKSVL 293
SIH ENE V+ +L
Sbjct: 405 SIHAEENERVVIDLL 419
>gi|207341631|gb|EDZ69632.1| YNL022Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 490
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/320 (30%), Positives = 161/320 (50%), Gaps = 47/320 (14%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDL-MALYQTPDVPKPRYVRVNT 72
+HP+ + +++ K + + +L ++ KV+ + +L ++ + D+P R++R+N
Sbjct: 107 KHPI------KDYVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINP 160
Query: 73 LKM----DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIV 115
LK + + + EL K+F ++ D+ +P+L + P + H L
Sbjct: 161 LKCHPNGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYK 220
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KGKGKIVACE 169
+G + +Q +AS A L P P V+D+CSAPGNKT H A+ + +I A E
Sbjct: 221 HGKIIIQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFE 280
Query: 170 LNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+ ER + L+ IK++G + NI V GDF L + Y +V ++DPSCSGSG +
Sbjct: 281 KDPERAKVLQKMIKIAGCSPNISVNVGDFTKLATPE-KYKDVTCFIVDPSCSGSGIFGRK 339
Query: 229 L---------------DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV 273
++P A RL KLS+FQ + ++HA+SFP +++
Sbjct: 340 FFDSFNRRKIDDKDDDGGIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKI 399
Query: 274 VYSTCSIHQVENEDVIKSVL 293
VYSTCSIH ENE V+ +L
Sbjct: 400 VYSTCSIHAEENERVVIDLL 419
>gi|190409023|gb|EDV12288.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
gi|256269492|gb|EEU04780.1| YNL022C-like protein [Saccharomyces cerevisiae JAY291]
gi|290770995|emb|CAY82164.2| EC1118_1N18_0045p [Saccharomyces cerevisiae EC1118]
gi|323335784|gb|EGA77064.1| YNL022C-like protein [Saccharomyces cerevisiae Vin13]
Length = 490
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 97/315 (30%), Positives = 159/315 (50%), Gaps = 44/315 (13%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDL-MALYQTPDVPKPRYVRVNTLKM-- 75
P+ D +++ K + + +L ++ KV+ + +L ++ + D+P R++R+N LK
Sbjct: 109 PIKD---YVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHP 165
Query: 76 --DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+ + + EL K+F ++ D+ +P+L + P + H L +G +
Sbjct: 166 NGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKII 225
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KGKGKIVACELNKER 174
+Q +AS A L P P V+D+CSAPGNKT H A+ + +I A E + ER
Sbjct: 226 IQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPER 285
Query: 175 VRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL---- 229
+ L+ IK++G + NI V GDF L + Y +V ++DPSCSGSG +
Sbjct: 286 AKVLQKMIKIAGCSPNISVNVGDFTKLATPE-KYKDVTCFIVDPSCSGSGIFGRKFFDSF 344
Query: 230 -----------DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTC 278
++P A RL KLS+FQ + ++HA+SFP +++VYSTC
Sbjct: 345 NRRKIDDKDDDGDIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKIVYSTC 404
Query: 279 SIHQVENEDVIKSVL 293
SIH ENE V+ +L
Sbjct: 405 SIHAEENERVVIDLL 419
>gi|326475897|gb|EGD99906.1| hypothetical protein TESG_07236 [Trichophyton tonsurans CBS 112818]
Length = 528
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 161/343 (46%), Gaps = 69/343 (20%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPK---PRYVRVNTLKMDVD------- 78
HK + L +L VR S E+L L Q V + PR++R+N +D
Sbjct: 100 HKSRLNAELTKLRVRRGCASKEELKHKLVQDQQVMQTFSPRWIRINNALTTLDHEIKSTF 159
Query: 79 ------SAVLELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
S++ EL + ++ D+ +PDL+ + D+ G + LQ KAS
Sbjct: 160 AGYESVSSLSELAEATANERKYFLDEHIPDLMAISRDIDITSSSAYKEGRIILQDKASCF 219
Query: 129 VAAAL-APKPG-WK--VLDACSAPGNKTVHLAALM-----KGKGKIVACELNKERVRRLK 179
A L PG WK ++D C+APGNKT HLA+L+ K K ++ + + + R + L+
Sbjct: 220 PAYLLLGDHPGQWKGDLIDGCAAPGNKTTHLASLLSSAPEKQKSRVFSLDASHSRSKILQ 279
Query: 180 DTIKLSGAANI-EVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL---- 233
+K +GA+NI VL G DFL LDP D + V A+LLDPSCSGSG LL
Sbjct: 280 TMVKKAGASNIVTVLPGQDFLALDPADTRFQHVTALLLDPSCSGSGITKREDVPLLDLPK 339
Query: 234 -------------------------PSHASGHTADPTE------MERLNKLSAFQKKALR 262
P H+S PT ERL KL+ Q + +
Sbjct: 340 SKAELMLSTTAGSKGSKNRKRKRENPVHSSSPGTFPTTEAKEDASERLAKLANLQSQIVE 399
Query: 263 HALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
HA FP RV YSTCSIH ENEDV+ VL IA + G++L
Sbjct: 400 HAFGFPAATRVTYSTCSIHHEENEDVVARVLASSIAKNRGWRL 442
>gi|326483000|gb|EGE07010.1| NOL1/NOP2/sun domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 528
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 117/343 (34%), Positives = 161/343 (46%), Gaps = 69/343 (20%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPK---PRYVRVNTLKMDVD------- 78
HK + L +L VR S E+L L Q V + PR++R+N +D
Sbjct: 100 HKSRLNAELTKLRVRRGCASKEELKHKLVQDQQVMQTFSPRWIRINNALTTLDHEIKSTF 159
Query: 79 ------SAVLELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
S++ EL + ++ D+ +PDL+ + D+ G + LQ KAS
Sbjct: 160 AGYESVSSLSELAEATANERKYFLDEHIPDLMAISRDIDITSSSAYKEGRIILQDKASCF 219
Query: 129 VAAAL-APKPG-WK--VLDACSAPGNKTVHLAALM-----KGKGKIVACELNKERVRRLK 179
A L PG WK ++D C+APGNKT HLA+L+ K K ++ + + + R + L+
Sbjct: 220 PAYLLLGDHPGQWKGDLIDGCAAPGNKTTHLASLLSSAPEKQKSRVFSLDASHTRSKILQ 279
Query: 180 DTIKLSGAANI-EVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL---- 233
+K +GA+NI VL G DFL LDP D + V A+LLDPSCSGSG LL
Sbjct: 280 TMVKKAGASNIVTVLPGQDFLALDPADTRFQHVTALLLDPSCSGSGITKREDVPLLDLPK 339
Query: 234 -------------------------PSHASGHTADPTE------MERLNKLSAFQKKALR 262
P H+S PT ERL KL+ Q + +
Sbjct: 340 SKAELMLSTTAGSKGSKNRKRKRENPVHSSSPGTFPTTEAKEDASERLAKLANLQSQIVE 399
Query: 263 HALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
HA FP RV YSTCSIH ENEDV+ VL IA + G++L
Sbjct: 400 HAFGFPAATRVTYSTCSIHHEENEDVVARVLASSIAKNRGWRL 442
>gi|358342106|dbj|GAA29579.2| putative methyltransferase NSUN5 [Clonorchis sinensis]
Length = 547
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 108/311 (34%), Positives = 145/311 (46%), Gaps = 61/311 (19%)
Query: 65 PRYVRVNTLKMDVDSAVLEL-----------GK------------QFVVQKDDLVPDLLI 101
P Y RVN L+ D++S + EL GK QF V L +LLI
Sbjct: 173 PCYARVNRLRADLESVLKELQSEQYTELQTTGKRTRKMLRKLEDNQFYVDYH-LSDNLLI 231
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
G L+ P + + + +Q KAS +V + P P VLDAC+APGNKT+ L +M
Sbjct: 232 FTHGSLLYKLPAVTSRKLIIQDKASCIVPEVVRPNPNADVLDACAAPGNKTLQLIEMMSP 291
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAA-----------------------------NIEV 192
+ + A + + R R L + + SG +E
Sbjct: 292 QATVFAIDRDPTRFRTLCNNLHSSGVQRLSISGSIIVDNLPDPENATTTKRPCSQPRVEA 351
Query: 193 LHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA---ERLDHLLPSHASGHTADPTEME- 248
+ DFL+LDP D +S V +ILLDPSCSGSG A E +L S S D + E
Sbjct: 352 ICQDFLSLDPMDSKFSRVESILLDPSCSGSGLVARQPEGTGSVLSSGYSNMGEDDMKGED 411
Query: 249 ---RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
RL +LS Q + LRHALSF V RVVYSTCS+ ENE V+ L F+L T
Sbjct: 412 ISRRLERLSNLQAQLLRHALSFQNVRRVVYSTCSVRSEENEAVVLENLE-RFRGQFKLET 470
Query: 306 PFPNGTAEASQ 316
+P G ++A +
Sbjct: 471 IWPAGNSDARR 481
>gi|365991930|ref|XP_003672793.1| hypothetical protein NDAI_0L00650 [Naumovozyma dairenensis CBS 421]
gi|410729813|ref|XP_003671085.2| hypothetical protein NDAI_0G00660 [Naumovozyma dairenensis CBS 421]
gi|401779904|emb|CCD25842.2| hypothetical protein NDAI_0G00660 [Naumovozyma dairenensis CBS 421]
Length = 496
Score = 144 bits (362), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 97/282 (34%), Positives = 141/282 (50%), Gaps = 48/282 (17%)
Query: 59 TPDVPKPRYVRVNTLKM----DVDSAVLELGKQF-------------VVQKDDLVPDLLI 101
T DV R++R+N L+ DV++ + ELGK+F + D+ +P L
Sbjct: 147 TEDVTPVRWIRINPLRCYQGRDVNAVLEELGKKFPKRVENWNDIVPGSIYYDEYIPHLYG 206
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ P + H L G + +Q +AS A L P ++DAC+APGNKT H+A+ M G
Sbjct: 207 IHPQDKITSHELYKQGKIIIQDRASCFPAHILNPSKDDIIIDACAAPGNKTTHVASYMFG 266
Query: 162 KGK-------IVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAI 213
K I A E + ER + L+ IK++G + NI+V GDF D + +V
Sbjct: 267 DAKQEDPHVQIYAFEKDPERAKILEKMIKVAGCSKNIQVTVGDFTKAATPD-KFKDVTGF 325
Query: 214 LLDPSCSGSGTAAERLDHLLPSHASGHTAD------------PTEME----------RLN 251
++DPSCSGSG + L + T D P E E RL
Sbjct: 326 IVDPSCSGSGIFGRKYVDSLNRQRNNDTTDKDKKSTEEDDEVPDEQEDYNKKEDLKTRLA 385
Query: 252 KLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
KLS+FQ + ++HA+SFP +++VYSTCSIH ENE V+ +L
Sbjct: 386 KLSSFQFQVIKHAMSFPTAKKIVYSTCSIHAEENERVVLDLL 427
>gi|115534021|ref|NP_497088.3| Protein Y53F4B.4, isoform a [Caenorhabditis elegans]
gi|85539533|emb|CAB70100.3| Protein Y53F4B.4, isoform a [Caenorhabditis elegans]
Length = 285
Score = 143 bits (361), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 81/205 (39%), Positives = 116/205 (56%), Gaps = 10/205 (4%)
Query: 90 VQKDDLVPDLLILPPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAP 148
V D V +L+I P + + + ++ + LQ KAS + A L P+PG +V D C+AP
Sbjct: 32 VYVDPHVENLIIFAPNIQNFYEYWMVEQRYLILQDKASCLPAFLLNPRPGSQVFDTCAAP 91
Query: 149 GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS 208
G KT H AA+M+ +GK+ A + +RV +K + S A GDFL D D +S
Sbjct: 92 GMKTSHAAAIMENQGKVWAMDRAADRVATMKQLLDASKVAIASSFCGDFLKTDVTDKKFS 151
Query: 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 268
+V+ ++DP CSGSG +R+D + +A E ERL KL Q L+HAL P
Sbjct: 152 KVKFAIVDPPCSGSGI-VKRMDEITGGNA--------EKERLEKLKNLQAMILKHALKLP 202
Query: 269 GVERVVYSTCSIHQVENEDVIKSVL 293
G++R VYSTCS+H+ ENE V+ VL
Sbjct: 203 GLKRAVYSTCSVHEEENEQVVDEVL 227
>gi|315043808|ref|XP_003171280.1| hypothetical protein MGYG_07281 [Arthroderma gypseum CBS 118893]
gi|311345069|gb|EFR04272.1| hypothetical protein MGYG_07281 [Arthroderma gypseum CBS 118893]
Length = 532
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 114/337 (33%), Positives = 159/337 (47%), Gaps = 68/337 (20%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDL----MALYQTPDVPKPRYVRVNTLKMDVD------- 78
HK I L +L +R S E+L + Q + PR++R+N +D
Sbjct: 100 HKSRINAELTKLRIRRGCASKEELKQKLLQDKQATETFSPRWIRINNALTRLDREMGSTF 159
Query: 79 ------SAVLELGKQFVVQK-----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
S++ EL + +K D+ +PDLL + D+ P G + LQ KAS
Sbjct: 160 AGYGPVSSLSELAEATADEKKKYYLDEHIPDLLAISRDIDITSSPAYKEGRLILQDKASC 219
Query: 128 MVAAALAPK--PGWK--VLDACSAPGNKTVHLAALM-----KGKGKIVACELNKERVRRL 178
A L W ++D C+APGNKT HLA+L+ K K +I + + ++ R + L
Sbjct: 220 FPAYLLLGDHPEQWDGDLIDGCAAPGNKTTHLASLLSSTARKQKKRIFSLDASRSRSKIL 279
Query: 179 KDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSG-TAAERLDHL-LP 234
+ +K +GA + + V+ G DFL LDP D + V A+LLDPSCSGSG T E + L LP
Sbjct: 280 QTMVKKAGADDMVTVMPGQDFLALDPTDTRFQHVTALLLDPSCSGSGITKREDVPQLSLP 339
Query: 235 SHAS--------------------------GHTADPTEM-------ERLNKLSAFQKKAL 261
S TA+P ERL KL+ Q + +
Sbjct: 340 KSKSELASTTTSGCKGVKNRKRKRETPVDASSTANPPTTGEKEDGSERLAKLANLQSQIV 399
Query: 262 RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMS 298
HA SFP RV YSTCSIHQ ENEDV+ VL ++S
Sbjct: 400 EHAFSFPAATRVTYSTCSIHQEENEDVVARVLASSVS 436
>gi|357617082|gb|EHJ70573.1| putative williams-beuren syndrome critical region protein [Danaus
plexippus]
Length = 638
Score = 143 bits (360), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 134/260 (51%), Gaps = 40/260 (15%)
Query: 62 VPKPRYVRVNT---LKMDVDSAVLELGKQFV---------------------VQKDDLVP 97
V +PRYVR+NT D A + G +F+ +D V
Sbjct: 128 VHRPRYVRINTNLLTTSDAIRAFQDEGYKFIRCTSGSYDDYLKQIQGLTEYDFTQDYHVK 187
Query: 98 DLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAA 157
+ + PG H H L +N + LQ KA+++ LAP G VLD C+APG KT +AA
Sbjct: 188 TMFVFAPGTKFHDHDLYLNNQIILQDKATALAVHLLAPPSGSTVLDMCAAPGMKTTQVAA 247
Query: 158 LMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217
++ +GK+ A E N +R + L ++ + + +E +H D L + D +V +LLDP
Sbjct: 248 YLRNQGKVYAVERNDQRYQTLCQLVESTSSKCVETIHKDVLEIKRGD--LDDVEYVLLDP 305
Query: 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVVYS 276
SCSGSG +D + ++ E RL KL++ Q+K L+HA++ FP +R+VYS
Sbjct: 306 SCSGSG-----MDFSVHNY--------IEDTRLAKLTSLQEKFLKHAMNAFPNAKRIVYS 352
Query: 277 TCSIHQVENEDVIKSVLPIA 296
TCSI ENE V+ +V+ +
Sbjct: 353 TCSIFPEENERVVTNVVKTS 372
>gi|50308649|ref|XP_454327.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643462|emb|CAG99414.1| KLLA0E08361p [Kluyveromyces lactis]
Length = 491
Score = 142 bits (359), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 105/336 (31%), Positives = 163/336 (48%), Gaps = 53/336 (15%)
Query: 1 MEEARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTP 60
+ +++RI + +HP+ + F++ H+ ++ L +L V+ KV S+ L+
Sbjct: 98 LSKSKRIQMG---KHPI------KTFILKHQTRLKAELTKLKVKLKVTSLSQLIKTDDGE 148
Query: 61 DVPKPRYVRVNTL--KMDVDSAVLELGKQF-------------VVQKDDLVPDLLILPPG 105
DV R++R+N + K D + EL K+F + D+ +P+L + PG
Sbjct: 149 DVTPVRWIRINPILVKERYDDVLAELNKKFPQRVNSWKQIVPGSIYYDEYIPNLFGIHPG 208
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG---- 161
+ H G + +Q +AS A L P V+DAC+APGNKT H+AA + G
Sbjct: 209 DKITSHEQYKRGKIIIQDRASCFPAHILNPNSTDVVIDACAAPGNKTTHVAAHIFGDVDT 268
Query: 162 ---KGKIVACELNKERVRRLKDTIKLSGAANIEVLH-GDFLNLDPKDPAYSEVRAILLDP 217
KI A E + ER + L+ + +G A +H GDF L K + V ++DP
Sbjct: 269 KVDSVKIHAFEKDPERAKTLQMMVATAGCAKGVKIHVGDFTKLG-KPELFQNVTGFIVDP 327
Query: 218 SCSGSGTAAER-LDHLLPSHASGHTAD-------PTEME------------RLNKLSAFQ 257
SCSGSG + +D + S D P E E RL KLS+FQ
Sbjct: 328 SCSGSGIFGRKAIDKVNLSKTGSSNTDEDQTSVEPVEQEKELFEKEQDLKNRLAKLSSFQ 387
Query: 258 KKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ ++HA+SFP +++ YSTCSIH ENE V+ +L
Sbjct: 388 YQIVKHAMSFPSAKKICYSTCSIHAEENERVVIDLL 423
>gi|146417055|ref|XP_001484497.1| hypothetical protein PGUG_03877 [Meyerozyma guilliermondii ATCC
6260]
Length = 514
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 100/307 (32%), Positives = 159/307 (51%), Gaps = 31/307 (10%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA ++ +K +Q L +L +R KVK++ DL + + P R++R+NT+ +
Sbjct: 163 PIKDA---VLENKTRLQAELIKLKLRYKVKTLADLPNTVEQDETP-IRWIRINTIVASEE 218
Query: 79 SAVLE---LGKQFV----------VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+ E +FV + +D +V +L + P + NG + +Q +A
Sbjct: 219 EVMREDFFEKLKFVDSTDEIASGKIYRDTIVTNLYGIHPSEKITNTEAYKNGKIIIQDRA 278
Query: 126 SSMVAAALAPKPGWK---VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
S A L P + V+DAC+APGNKT HLA+ + G + A E + +RV+ LK
Sbjct: 279 SCFPAQILNGDPENQHEVVIDACAAPGNKTTHLASFLPKNGVVHAFERDDKRVKTLKMMT 338
Query: 183 KLSGAAN---IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+ N I++ H DF+ + P D + +V I++DPSCSGSG L+
Sbjct: 339 SKALGPNKDLIQITHADFMTIIPSD--FPKVTGIVVDPSCSGSGIFGRALEDAQLEQDR- 395
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAM 297
+ + ERL KL++FQ K ++H + FPG ++VYSTCSIH ENE V+ +L P
Sbjct: 396 ---ETIDTERLTKLASFQFKIVKHTMKFPGARKIVYSTCSIHPHENERVVMDLLADPEVK 452
Query: 298 SFGFQLA 304
G++LA
Sbjct: 453 EQGWKLA 459
>gi|398408451|ref|XP_003855691.1| hypothetical protein MYCGRDRAFT_107930 [Zymoseptoria tritici
IPO323]
gi|339475575|gb|EGP90667.1| hypothetical protein MYCGRDRAFT_107930 [Zymoseptoria tritici
IPO323]
Length = 560
Score = 142 bits (359), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 158/357 (44%), Gaps = 83/357 (23%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKP-------------RYVRVNTLKMD 76
HK + L ++ +R + +++DL AL V +P R++R+NT K +
Sbjct: 102 HKARLSAELTKVRIRRRCATLDDLRALVNADSVDEPQAGADGSQPLRHPRWIRINTFKAN 161
Query: 77 VDSAVLELGKQFV-VQK----------------DDLVPDLLILPPGCDLHVHPLIVNGCV 119
++ + + V+K DD VPDL+ D NG
Sbjct: 162 LEEELKTTFSNYTKVEKLNEITHAAPGKRLLYVDDHVPDLIATAGPDDTSSLQSYKNGKF 221
Query: 120 FLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALMKG---------KGKIVACE 169
Q KAS A L P ++D C+APGNKT H+AA++ K ++ ACE
Sbjct: 222 IYQEKASCFPAYLLNPTSDDGDIIDTCAAPGNKTTHVAAILSNTLDAVSDGKKRRVTACE 281
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+ ER + L+ +KL+GA N+ + DFL +DP S V A+LLDPSCSGSG
Sbjct: 282 KDPERSKTLEKMVKLAGANNVVTIKAKQDFLRIDPTRKDVSNVTALLLDPSCSGSGIVGR 341
Query: 228 RLDHL---LPSH-----------------------------------ASGHTADPTEME- 248
L LPS A T D ++E
Sbjct: 342 DEATLKVHLPSATAEDSTAKGRKRKRSSKPEPPKLQPEAPIEIEEEVADDETDDKAKLEA 401
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
RL KLS FQ + L+HA++FP ++ YSTCSIH ENE+V+ L IA G+++
Sbjct: 402 RLEKLSTFQLRLLQHAMAFPAARKISYSTCSIHSEENENVVVKALLSDIAQRKGWRI 458
>gi|118573084|sp|Q63ZY6.2|NSN5C_HUMAN RecName: Full=Putative methyltransferase NSUN5C; AltName:
Full=NOL1/NOP2/Sun domain family member 5C; AltName:
Full=Williams-Beuren syndrome chromosomal region 20C
protein
Length = 315
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 114/198 (57%), Gaps = 8/198 (4%)
Query: 96 VPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
+P+LL+ P DLH HPL G + LQ +AS + A L P+ KT HL
Sbjct: 1 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
AAL+K +GKI A +L+ R+ + + +G + E+ DFL + P DP Y EV +LL
Sbjct: 61 AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
DPSCSGSG + +L+ T P RL+ L+ FQ++AL HAL+FP ++R+VY
Sbjct: 121 DPSCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQRALCHALTFPSLQRLVY 172
Query: 276 STCSIHQVENEDVIKSVL 293
S CS+ Q ENED+++ L
Sbjct: 173 SMCSLCQEENEDMVQDAL 190
>gi|195996617|ref|XP_002108177.1| hypothetical protein TRIADDRAFT_52388 [Trichoplax adhaerens]
gi|190588953|gb|EDV28975.1| hypothetical protein TRIADDRAFT_52388 [Trichoplax adhaerens]
Length = 358
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 91/239 (38%), Positives = 126/239 (52%), Gaps = 43/239 (17%)
Query: 65 PRYVRVNTLKMDVDSAVLEL---GKQFV--------------------VQKDDLVPDLLI 101
PRYVRVNTLKM A+ G Q++ D + +LL+
Sbjct: 24 PRYVRVNTLKMTKVKAIERFIANGFQYIPSDLVYNAGTVDITKLREKIFTSDIHIENLLV 83
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
LPP DLH + + +NG V LQ KAS + A L P P ++DAC+APGNKT HLA+++
Sbjct: 84 LPPKSDLHDNEMYLNGEVVLQDKASCIPAFTLNPPPQSCIIDACAAPGNKTSHLASIIGN 143
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
GKI A +++ R++ +++ + +G +E Y +V ILLDPSCSG
Sbjct: 144 VGKIYAFDISPNRIKTMRELLDKAGVNVME---------------YEDVEYILLDPSCSG 188
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSI 280
SG +R D +A RL L+ FQ KAL+ ALSFP V++VVYSTCS+
Sbjct: 189 SGI-VDRGD----INAESKKLCNANKNRLQSLADFQLKALKQALSFPSVKKVVYSTCSM 242
>gi|226295065|gb|EEH50485.1| conserved hypothetical protein [Paracoccidioides brasiliensis Pb18]
Length = 555
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 160/347 (46%), Gaps = 73/347 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMAL-------YQTPDVP--KPRYVRVNTLKMDVD-- 78
HK I+ + VR + S+E+L AL Y P PR+VR+N + +D
Sbjct: 101 HKSRIKAEFVKSRVRRRCGSVEELKALIAKEKRQYGAEKEPLVSPRWVRINKVLTTLDKE 160
Query: 79 -----------SAVLELGKQF--VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+++LEL +D VPDLL +P G +L G + LQ KA
Sbjct: 161 LNTTFASYKSAASLLELSPSAPQTYYRDSNVPDLLAVPQGVELTSSTAYKRGRIILQDKA 220
Query: 126 SSMVAAAL-APKP-GWK--VLDACSAPGNKTVHLAALM------KGKG------KIVACE 169
S A L P WK ++D+C+APGNKT HLA+LM +G G I +C+
Sbjct: 221 SCFPAYLLLGDNPEQWKGDLIDSCAAPGNKTTHLASLMCSDTEFRGGGLVQKKPIIFSCD 280
Query: 170 LNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
++ R L+ + ++G + VL G DFL L+P D + V +LLDPSCSGSG
Sbjct: 281 ASQSRSNILQRMVSVAGVDKLVSVLPGQDFLALNPCDKRFQNVTGLLLDPSCSGSGIVGR 340
Query: 228 ----RL-------------------------DHLLPSHASGHTADPTEMERLNKLSAFQK 258
RL D P + + + +RL KLS QK
Sbjct: 341 VDVPRLALPTMSGPRYWSKKRKRTVRAQTDGDCFAPGDSEDQSPTNVDYDRLFKLSNLQK 400
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
+ + HA +FP RV YSTCSIH ENE V+ VL P+A G+++
Sbjct: 401 RIIEHAFNFPAATRVTYSTCSIHAQENEVVVSRVLKSPVARRRGWRI 447
>gi|16226075|gb|AAL16068.1|AF420250_1 NOL1R2 [Homo sapiens]
gi|10432924|dbj|BAB13875.1| unnamed protein product [Homo sapiens]
Length = 315
Score = 142 bits (358), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 114/198 (57%), Gaps = 8/198 (4%)
Query: 96 VPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
+P+LL+ P DLH HPL G + LQ +AS + A L P+ KT HL
Sbjct: 1 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRRAPMSWMPVPPQAIKTSHL 60
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
AAL+K +GKI A +L+ R+ + + +G + E+ DFL + P DP Y EV +LL
Sbjct: 61 AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
DPSCSGSG + +L+ T P RL+ L+ FQ++AL HAL+FP ++R+VY
Sbjct: 121 DPSCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQRALCHALTFPSLQRLVY 172
Query: 276 STCSIHQVENEDVIKSVL 293
S CS+ Q ENED+++ L
Sbjct: 173 SMCSLCQEENEDMVQDAL 190
>gi|339249920|ref|XP_003373945.1| NOL1/NOP2/sun family protein [Trichinella spiralis]
gi|316969845|gb|EFV53885.1| NOL1/NOP2/sun family protein [Trichinella spiralis]
Length = 456
Score = 142 bits (358), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 101/266 (37%), Positives = 133/266 (50%), Gaps = 42/266 (15%)
Query: 65 PRYVRVNTLKMDVDSAVLELGK------------------------QFVVQKDDLVPDLL 100
PRY RVNTL D V + QF + D V DLL
Sbjct: 145 PRYARVNTLIRDTADVVHYMESLGMTLIPPGNTEKHLKAISVLEKWQFTLDLD--VADLL 202
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK 160
+ PG DLH L+ G + L+ K+S + L +PG VLD C+APGNKT H+A+LM
Sbjct: 203 VFAPGMDLHDDNLLQTGQLILEDKSSCLPVICLDLEPGTTVLDICAAPGNKTSHMASLMN 262
Query: 161 GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCS 220
KGKI++ + +K+RV L+ ++ EV+ DFL DP + V +LLDP CS
Sbjct: 263 NKGKIISVDHHKDRVMTLRMRLESFKVTCCEVIEQDFLKFSDYDPIFENVTHVLLDPPCS 322
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEME--RLNKLSAFQKKALRHALSFPGVERVVYSTC 278
GSG R+D D M+ RL +LS Q L+ ALS V R VYSTC
Sbjct: 323 GSG-VVNRVDF----------GDDEAMDENRLKRLSNLQAMMLKKALSQSSVMRCVYSTC 371
Query: 279 SIHQVENEDVIKSVLPIAMSFGFQLA 304
SIH+ ENE V++ +L +FG Q A
Sbjct: 372 SIHEEENEAVVEEILK---TFGDQFA 394
>gi|354544794|emb|CCE41519.1| hypothetical protein CPAR2_800710 [Candida parapsilosis]
Length = 480
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 105/314 (33%), Positives = 161/314 (51%), Gaps = 46/314 (14%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA ++ HK +Q +L +R KVKS+ D + + D R+ R+NT+K+D +
Sbjct: 91 PIKDA---VLAHKTRLQAEFIKLKLRYKVKSV-DQLPTKECEDETPVRWFRINTVKIDPE 146
Query: 79 ---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
++ +L ++ DD +P+L + P L + G + +Q
Sbjct: 147 RFFKKHQFFTNLQPVNSFQDLTGPGLIYADDYIPNLFGIHPKEKLSLTEAYKLGEIIIQD 206
Query: 124 KASSMVAAALA-PKPGWKVLDACSAPGNKTVHLAALM---KGKGKIVACELNKERVRRLK 179
+AS A L K K++DAC+APGNKT H+A+ + + A E +++RV L+
Sbjct: 207 RASCFPAHILNHNKEHTKIIDACAAPGNKTSHVASYLPNYDSSSVVYAVERDEKRVGILR 266
Query: 180 D----TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
+ S I+VLH DF ++ D + EV +++DPSCSGSG
Sbjct: 267 TMSERALGKSKKKLIQVLHNDFTKINSND--FPEVTGLIVDPSCSGSGIF---------- 314
Query: 236 HASGHTADPTEM--ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
G +D E +RL KL++FQ ++HALSFPG +VVYSTCSIH ENE V+ +L
Sbjct: 315 ---GRASDEEESNDQRLEKLASFQVIIMKHALSFPGARKVVYSTCSIHVEENERVVIDLL 371
Query: 294 --PIAMSFGFQLAT 305
P S G++LAT
Sbjct: 372 SDPQIQSQGWKLAT 385
>gi|302499366|ref|XP_003011679.1| NOL1/NOP2/sun domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291175231|gb|EFE31039.1| NOL1/NOP2/sun domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 550
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 118/333 (35%), Positives = 160/333 (48%), Gaps = 69/333 (20%)
Query: 40 QLLVRNKVKSIEDLM-ALYQTPDVPK---PRYVRVNTLKMDVD-------------SAVL 82
+L VR S E+L L Q V K PR++R+N + +D S++
Sbjct: 132 KLRVRRGCASKEELKHKLVQDQQVMKAFSPRWIRINNVLTTLDHEMKSTFAGYESASSLS 191
Query: 83 ELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL-APKP 137
EL + +K D+ +PDL+ + D+ G + LQ KAS A L P
Sbjct: 192 ELAEATADEKKYCLDEHIPDLMAISRDIDITSSSAYKEGRLILQDKASCFPAYLLLGDHP 251
Query: 138 G-WK--VLDACSAPGNKTVHLAALM-----KGKGKIVACELNKERVRRLKDTIKLSGAAN 189
G WK ++D C+APGNKT HLA+L+ K K ++ + + + R + L+ +K +GA+N
Sbjct: 252 GQWKGDLIDGCAAPGNKTTHLASLLSSTPEKQKNRVFSLDASHSRSKILQTMVKKAGASN 311
Query: 190 I-EVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSG-TAAERLDHL-LPSHASGHT---- 241
I VL G DFL LDP D + V A+LLDPSCSGSG T E + L LP S T
Sbjct: 312 IVTVLPGQDFLALDPADTRFQHVTALLLDPSCSGSGITKREDVPQLDLPKSKSELTLATT 371
Query: 242 -----------------------------ADPTEMERLNKLSAFQKKALRHALSFPGVER 272
A E ERL KL+ Q + + HA FP R
Sbjct: 372 TSSKGSKNRKRKRENPADSSSPGSSPTTEAKEDESERLAKLANLQSQIVEHAFGFPAATR 431
Query: 273 VVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
V YSTCSIH ENEDV+ VL IA + G++L
Sbjct: 432 VTYSTCSIHHEENEDVVARVLASSIAKNRGWRL 464
>gi|225677768|gb|EEH16052.1| NOL1/NOP2/Sun domain family protein [Paracoccidioides brasiliensis
Pb03]
Length = 555
Score = 141 bits (356), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 160/347 (46%), Gaps = 73/347 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMAL-------YQTPDVP--KPRYVRVNTLKMDVD-- 78
HK I+ + VR + S+E+L AL Y P PR+VR+N + +D
Sbjct: 101 HKSRIKAEFVKSRVRRRCGSVEELKALIAKEKRQYGAEKEPLVSPRWVRINKVLTTLDKE 160
Query: 79 -----------SAVLELG--KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+++LEL +D VPDLL +P G +L G + LQ KA
Sbjct: 161 LNTTFASYKSAASLLELSPLAPQTYYRDSNVPDLLAVPQGVELTSSTAYKRGRIILQDKA 220
Query: 126 SSMVAAAL-APKP-GWK--VLDACSAPGNKTVHLAALM------KGKG------KIVACE 169
S A L P WK ++D+C+APGNKT HLA+LM +G G I +C+
Sbjct: 221 SCFPAYLLLGDNPEQWKGDLIDSCAAPGNKTTHLASLMCSDTEFRGGGLVQKKPIIFSCD 280
Query: 170 LNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
++ R L+ + ++G + VL G DFL L+P D + V +LLDPSCSGSG
Sbjct: 281 ASQSRSNILQRMVSVAGVDKLVSVLPGQDFLALNPCDKRFQNVTGLLLDPSCSGSGIVGR 340
Query: 228 ----RL-------------------------DHLLPSHASGHTADPTEMERLNKLSAFQK 258
RL D P + + + +RL KLS QK
Sbjct: 341 DDVPRLALPTMSGPRYWSKKRKRTVRAQTDGDCFAPGDSEDQSPTNVDYDRLFKLSNLQK 400
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
+ + HA +FP RV YSTCSIH ENE V+ VL P+A G+++
Sbjct: 401 RIIEHAFNFPAATRVTYSTCSIHAQENEVVVSRVLKSPVARRRGWRI 447
>gi|241958118|ref|XP_002421778.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223645123|emb|CAX39720.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 504
Score = 141 bits (355), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 107/311 (34%), Positives = 158/311 (50%), Gaps = 34/311 (10%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA + +K +Q +L ++ KVKS++ L D R+ R+NT+K+D D
Sbjct: 140 PLKDA---FLSNKTRLQAEFIKLKLKYKVKSVDQLPTKEADEDETPIRWFRINTIKIDKD 196
Query: 79 ---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
S++ E+ ++ DD +P+L + P + G + +Q
Sbjct: 197 RFYTKHPFFQKLQPVSSIDEITGTGMIYSDDYIPNLFGVHPREKITSTEAYRLGEIIIQD 256
Query: 124 KASSMVAAALAPKPG---WKVLDACSAPGNKTVHLAALMKGKGKIV-ACELNKERVRRLK 179
+AS + L P +V+DAC+APGNKT H AA + +V A E + +RV+ LK
Sbjct: 257 RASCFPSHILNSDPKDVHTQVIDACAAPGNKTTHAAAHLPNSDSVVYAFERDPKRVKILK 316
Query: 180 DTI-KLSGAAN---IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
K +G A I+V H DF P D + +V +++DPSCSGSG L+ S
Sbjct: 317 TMCEKATGKAKKKLIQVTHADFTTTKPDD--FPDVTGLVVDPSCSGSGIFGRALED---S 371
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL-- 293
H T ERLNKL+ FQ ++HALSFP ++VVYSTCSIH ENE V+ +L
Sbjct: 372 HNEEETE-NVNTERLNKLAGFQFAIMKHALSFPSAKKVVYSTCSIHAQENERVVVDLLSD 430
Query: 294 PIAMSFGFQLA 304
P G++LA
Sbjct: 431 PEVNRRGWKLA 441
>gi|52545774|emb|CAH56289.1| hypothetical protein [Homo sapiens]
Length = 245
Score = 140 bits (354), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 82/198 (41%), Positives = 114/198 (57%), Gaps = 7/198 (3%)
Query: 96 VPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
+P+LL+ P DLH HPL G + LQ +AS + A L P+ KT HL
Sbjct: 1 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
AAL+K +GKI A +L+ R+ + + +G + E+ DFL + P DP Y EV +LL
Sbjct: 61 AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
DPSCSGSG R L +G T P RL+ L+ FQ++AL HAL+FP ++R+VY
Sbjct: 121 DPSCSGSGGMPSR---QLEEPGAG-TPSPV---RLHALAGFQQRALCHALTFPSLQRLVY 173
Query: 276 STCSIHQVENEDVIKSVL 293
S CS+ Q ENED+++ L
Sbjct: 174 SMCSLCQEENEDMVQDAL 191
>gi|238491244|ref|XP_002376859.1| NOL1/NOP2/sun domain protein, putative [Aspergillus flavus
NRRL3357]
gi|220697272|gb|EED53613.1| NOL1/NOP2/sun domain protein, putative [Aspergillus flavus
NRRL3357]
Length = 557
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 74/347 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVP------KPRYVRVNTLKMDVD----- 78
HK ++ + VR S+E L Q P PR++R+N ++ +
Sbjct: 102 HKTRLKGEFIKARVRRGCASVEQLKDAVQKEKQPLGSAAFYPRWIRINNVRTTAEKQFES 161
Query: 79 --------SAVLELGKQFVVQK---DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
+A+ EL + ++ D +PDL+ + PG D P NG + LQ KAS
Sbjct: 162 TFASYKRVNALSELAVKDDTKRIYVDSNIPDLVAVAPGVDFTATPAYKNGEIILQDKASC 221
Query: 128 MVAAALAPK----PGWKVLDACSAPGNKTVHLAALM-------KGKGKIVACELNKERVR 176
A L + G ++D C+APGNKT HLA+L+ K + +I++ + ++ R +
Sbjct: 222 FPAYLLFGEGSVWSGGDLVDGCAAPGNKTTHLASLLCKNEKRKKPRQRIISMDASQVRAK 281
Query: 177 RLKDTIKLSGAANIE-VLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD---H 231
L+ + +GA + VL G DFL LDP+D + +V A+LLDPSCSGSG R D
Sbjct: 282 TLQKMVSAAGADHFTTVLPGQDFLALDPEDERFEKVSALLLDPSCSGSGIIG-RDDVPKF 340
Query: 232 LLP-----------------SHASGHTADPT----------------EMERLNKLSAFQK 258
+LP +G AD + ++ERL KLS Q
Sbjct: 341 VLPVSPAEERKKQGKKRKRGQDEAGDAADGSVSMSATDENEMASTHLDLERLTKLSNLQT 400
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
+ + HA+SFP R+ YSTCSIH ENE V++ +L +A G+++
Sbjct: 401 RIVEHAMSFPAATRITYSTCSIHLTENESVVERLLTSEVAKRRGWRI 447
>gi|391865916|gb|EIT75195.1| proliferation-associated nucleolar protein [Aspergillus oryzae
3.042]
Length = 557
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 74/347 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVP------KPRYVRVNTLKMDVD----- 78
HK ++ + VR S+E L Q P PR++R+N ++ +
Sbjct: 102 HKTRLKGEFIKARVRRGCASVEQLKDAVQKEKQPLGSAAFYPRWIRINNVRTTAEKQFES 161
Query: 79 --------SAVLELGKQFVVQK---DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
+A+ EL + ++ D +PDL+ + PG D P NG + LQ KAS
Sbjct: 162 TFASYKRVNALSELAVKDDTKRIYVDSNIPDLVAVAPGVDFTATPAYKNGEIILQDKASC 221
Query: 128 MVAAALAPK----PGWKVLDACSAPGNKTVHLAALM-------KGKGKIVACELNKERVR 176
A L + G ++D C+APGNKT HLA+L+ K + +I++ + ++ R +
Sbjct: 222 FPAYLLFGEGSVWSGGDLVDGCAAPGNKTTHLASLLCKNEKRKKPRQRIISMDASQVRAK 281
Query: 177 RLKDTIKLSGAANIE-VLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD---H 231
L+ + +GA + VL G DFL LDP+D + +V A+LLDPSCSGSG R D
Sbjct: 282 TLQKMVSAAGADHFTTVLPGQDFLALDPEDERFEKVSALLLDPSCSGSGIIG-RDDVPKF 340
Query: 232 LLP-----------------SHASGHTADPT----------------EMERLNKLSAFQK 258
+LP +G AD + ++ERL KLS Q
Sbjct: 341 VLPVSPAEERKKQGKKRKRGQDEAGDAADGSVSMSATDENEMASTHLDLERLTKLSNLQT 400
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
+ + HA+SFP R+ YSTCSIH ENE V++ +L +A G+++
Sbjct: 401 RIVEHAMSFPAATRITYSTCSIHLTENESVVERLLTSEVAKRRGWRI 447
>gi|169773281|ref|XP_001821109.1| NOL1/NOP2/sun domain protein [Aspergillus oryzae RIB40]
gi|83768970|dbj|BAE59107.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 557
Score = 140 bits (354), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 108/347 (31%), Positives = 165/347 (47%), Gaps = 74/347 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVP------KPRYVRVNTLKMDVD----- 78
HK ++ + VR S+E L Q P PR++R+N ++ +
Sbjct: 102 HKTRLKGEFIKARVRRGCASVEQLKDAVQKEKQPLGSAAFYPRWIRINNVRTTAEKQFES 161
Query: 79 --------SAVLELGKQFVVQK---DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
+A+ EL + ++ D +PDL+ + PG D P NG + LQ KAS
Sbjct: 162 TFASYKRVNALSELAVKDDTKRIYVDSNIPDLVAVAPGVDFTATPAYKNGEIILQDKASC 221
Query: 128 MVAAALAPK----PGWKVLDACSAPGNKTVHLAALM-------KGKGKIVACELNKERVR 176
A L + G ++D C+APGNKT HLA+L+ K + +I++ + ++ R +
Sbjct: 222 FPAYLLFGEGSVWSGGDLVDGCAAPGNKTTHLASLLCKNEKRKKPRQRIISMDASQVRAK 281
Query: 177 RLKDTIKLSGAANIE-VLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD---H 231
L+ + +GA + VL G DFL LDP+D + +V A+LLDPSCSGSG R D
Sbjct: 282 TLQKMVSAAGADHFTTVLPGQDFLALDPEDERFEKVSALLLDPSCSGSGIIG-RDDVPKF 340
Query: 232 LLP-----------------SHASGHTADPT----------------EMERLNKLSAFQK 258
+LP +G AD + ++ERL KLS Q
Sbjct: 341 VLPVSPAEERKKQGKKRKRGQDEAGDAADGSVSISATDENEMASTHLDLERLTKLSNLQT 400
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
+ + HA+SFP R+ YSTCSIH ENE V++ +L +A G+++
Sbjct: 401 RIVEHAMSFPAATRITYSTCSIHLTENESVVERLLTSEVAKRRGWRI 447
>gi|255957165|ref|XP_002569335.1| Pc21g23680 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591046|emb|CAP97265.1| Pc21g23680 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 574
Score = 140 bits (353), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 114/364 (31%), Positives = 165/364 (45%), Gaps = 91/364 (25%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALY--------QTPDVPKPRYVRVNTLKMDVDSAV 81
HK ++ + VR +IE A+ T PR+VR+N ++ ++ +
Sbjct: 101 HKARLRAEFTKARVRRGCATIEQFKAVVIREKRLADGTSHFVYPRWVRINNIRTTLEEQL 160
Query: 82 LELGKQF--------VVQKDDL--------------VPDLLILPPGCDLHVHPLIVNGCV 119
K + + +D+L +PDL+ +P G D NG +
Sbjct: 161 STTFKSYRRVDTLAELAPEDELESRKPEPRLFIDANIPDLVAVPFGADFTASSAYKNGEI 220
Query: 120 FLQGKASSMVAAAL----APKPGWK--VLDACSAPGNKTVHLAALM----KG----KGKI 165
LQ KAS A L P W+ ++D C+APGNKT HLA+L+ KG K +I
Sbjct: 221 ILQDKASCFPAYLLLGDRGPSDPWEGDLIDGCAAPGNKTTHLASLLAKQQKGNKDSKQRI 280
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
+ + + R R L+ + L+GA ++ VL G DFL LDP+D + +V +LLDPSCSGSG
Sbjct: 281 FSMDASTMRSRTLQKMVSLAGADSVTVLQGQDFLALDPEDEQFEKVTGLLLDPSCSGSGI 340
Query: 225 AAERLD---HLLPSHAS----------------GHTAD--------------PT------ 245
R D LP+ A+ G AD PT
Sbjct: 341 IG-RDDVPQFTLPTAAAYKAPKSHGKKRKRPSNGDEADGEQSKATMGTPQAAPTDENDIP 399
Query: 246 ----EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSF 299
+ ERL KLS+ Q + + HAL F RV YSTCSIH +ENE V+ +L +A
Sbjct: 400 DGTIDSERLTKLSSIQARIVEHALRFSNATRVTYSTCSIHLIENEGVVARILNSQVAKER 459
Query: 300 GFQL 303
G++L
Sbjct: 460 GWRL 463
>gi|58267526|ref|XP_570919.1| nucleus protein [Cryptococcus neoformans var. neoformans JEC21]
gi|57227153|gb|AAW43612.1| nucleus protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 543
Score = 140 bits (353), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 154/315 (48%), Gaps = 41/315 (13%)
Query: 18 WPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVN------ 71
WP A +M H+ ++ L ++ +R EDL + RY+R N
Sbjct: 107 WPPKPA---VMRHQARLKAELVRIQIREGKTKKEDLAKTSGEGEAV--RYIRYNPNAGRP 161
Query: 72 ------------TLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPG-CDLHVH-PLIVNG 117
K+D + GK F D + D+L+ PG + V+ G
Sbjct: 162 FEELGEYLKKKGYTKLDEPVYPIPEGKYFA---DPHLSDVLLAFPGSANWWVNDEWYEGG 218
Query: 118 CVFLQGKASSMVAAALAPKPGW-----KVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
V LQ KAS A L GW + LDA SAPGNKT +++ALM +GK+ A E +
Sbjct: 219 GVILQDKASCFPARVLME--GWVEGEGECLDATSAPGNKTSYVSALMANRGKLHAFERSP 276
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
R + L+ ++ + +N++ DF + DPK + V ILLDPSCSGSG RLD+L
Sbjct: 277 NRFKTLEKMLEKARCSNVQAQRADFTDTDPKSKEFKNVTRILLDPSCSGSGI-VNRLDYL 335
Query: 233 LPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292
+ A ++ ERL KL++FQ + + HA FP +R+VYSTCSIH E+E V+ +
Sbjct: 336 VDDDAE---ESDSKTERLEKLASFQLQMILHAFKFPSAQRIVYSTCSIHPEEDERVVMAA 392
Query: 293 LP--IAMSFGFQLAT 305
L A G+ LA+
Sbjct: 393 LQSNTAKENGWGLAS 407
>gi|321259261|ref|XP_003194351.1| nucleus protein [Cryptococcus gattii WM276]
gi|317460822|gb|ADV22564.1| nucleus protein, putative [Cryptococcus gattii WM276]
Length = 542
Score = 140 bits (353), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 107/315 (33%), Positives = 154/315 (48%), Gaps = 41/315 (13%)
Query: 18 WPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVN------ 71
WP A +M H+ ++ L ++ +R EDL + + RY+R N
Sbjct: 107 WPPKPA---VMRHQARLKAELVKIQIREGKTKKEDLAKT--SGEGEAVRYIRYNPNAGRS 161
Query: 72 ------------TLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPG-CDLHVH-PLIVNG 117
K+D + GK F D + D+L+ PG + V+ G
Sbjct: 162 FTELEEYLEKKGYTKLDEPVYPVPEGKYFA---DPHLSDVLLAFPGSANWWVNDEWYEGG 218
Query: 118 CVFLQGKASSMVAAALAPKPGW-----KVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
V LQ KAS A L GW + LDA SAPGNKT +++ALM +GK+ A E +
Sbjct: 219 GVILQDKASCFPARVLME--GWVEGEGECLDATSAPGNKTSYVSALMANRGKLHAFERSP 276
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
R + L+ + + +N++ DF DPK + V ILLDPSCSGSG RLD+L
Sbjct: 277 NRFKTLEKMLAKARCSNVQAQRADFTGSDPKSKEFRNVTRILLDPSCSGSGI-VNRLDYL 335
Query: 233 LPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292
+ A ++ ERL KL++FQ + + HA FP +R+VYSTCSIH E+E V+ +
Sbjct: 336 VDDDAQ---ESDSKTERLEKLASFQLQMILHAFKFPSAQRIVYSTCSIHAEEDERVVMAA 392
Query: 293 LP--IAMSFGFQLAT 305
L IA G+ LA+
Sbjct: 393 LQSNIAKENGWGLAS 407
>gi|58267524|ref|XP_570918.1| nucleus protein [Cryptococcus neoformans var. neoformans JEC21]
gi|134112207|ref|XP_775079.1| hypothetical protein CNBE3530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257731|gb|EAL20432.1| hypothetical protein CNBE3530 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227152|gb|AAW43611.1| nucleus protein, putative [Cryptococcus neoformans var. neoformans
JEC21]
Length = 566
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 106/315 (33%), Positives = 154/315 (48%), Gaps = 41/315 (13%)
Query: 18 WPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVN------ 71
WP A +M H+ ++ L ++ +R EDL + RY+R N
Sbjct: 130 WPPKPA---VMRHQARLKAELVRIQIREGKTKKEDLAKTSGEGEAV--RYIRYNPNAGRP 184
Query: 72 ------------TLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPG-CDLHVH-PLIVNG 117
K+D + GK F D + D+L+ PG + V+ G
Sbjct: 185 FEELGEYLKKKGYTKLDEPVYPIPEGKYFA---DPHLSDVLLAFPGSANWWVNDEWYEGG 241
Query: 118 CVFLQGKASSMVAAALAPKPGW-----KVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
V LQ KAS A L GW + LDA SAPGNKT +++ALM +GK+ A E +
Sbjct: 242 GVILQDKASCFPARVLME--GWVEGEGECLDATSAPGNKTSYVSALMANRGKLHAFERSP 299
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
R + L+ ++ + +N++ DF + DPK + V ILLDPSCSGSG RLD+L
Sbjct: 300 NRFKTLEKMLEKARCSNVQAQRADFTDTDPKSKEFKNVTRILLDPSCSGSGI-VNRLDYL 358
Query: 233 LPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292
+ A ++ ERL KL++FQ + + HA FP +R+VYSTCSIH E+E V+ +
Sbjct: 359 VDDDAE---ESDSKTERLEKLASFQLQMILHAFKFPSAQRIVYSTCSIHPEEDERVVMAA 415
Query: 293 LP--IAMSFGFQLAT 305
L A G+ LA+
Sbjct: 416 LQSNTAKENGWGLAS 430
>gi|310791572|gb|EFQ27099.1| NOL1/NOP2/sun family protein [Glomerella graminicola M1.001]
Length = 580
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 112/341 (32%), Positives = 158/341 (46%), Gaps = 67/341 (19%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT---PDVPKPRYVRVNTLKMDVDSAVLELGK 86
HK + L + +R K+ S+E L A P+ PR++RVN LK V+ + K
Sbjct: 102 HKARLASELTRARLRRKMPSLEALRADVNANADPEGRHPRWIRVNALKSTVEDQLETTFK 161
Query: 87 QF--------VVQK-------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAA 131
+ V Q D VP+LL PG D+ P + G + LQ KAS A
Sbjct: 162 AYERAPSVEAVTQSAGKAIFIDAHVPNLLAASPGTDVTKTPAYLKGEIILQDKASCFPAY 221
Query: 132 ALAPKP-GWKVLDACSAPGNKTVHLAALMKG--------KGKIVACELNKERVRRLKDTI 182
L P+ V+D+C+APGNKT HLAA++K K I A E + R + L+ +
Sbjct: 222 LLDPRSEDGDVIDSCAAPGNKTTHLAAIVKSHEPEQGAQKQTIFAFERDPRRAQTLEKMV 281
Query: 183 KLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL------- 233
K++G+ ++ + DFL++DPK AY V A+LLDPSCSGSG L
Sbjct: 282 KIAGSRDLTKIGPGQDFLDVDPKAGAYKSVGALLLDPSCSGSGIVGRDSMPELHLPEVPG 341
Query: 234 PSHASGHTADP----------------------TEME-------RLNKLSAFQKKALRHA 264
P A G P EM+ RL+ L+ FQ L HA
Sbjct: 342 PVAAKGTKGKPQVSRKRKHAEEKPVTVDDDGNAVEMQSEQELQRRLDALAGFQLTLLLHA 401
Query: 265 LSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
+ FP +++ YSTCSIH ENE V+ L +A G+++
Sbjct: 402 MKFPSAKKISYSTCSIHAEENEGVVIKALASEVARERGWKI 442
>gi|66828039|ref|XP_647374.1| NOL1/NOP2/Sun family protein [Dictyostelium discoideum AX4]
gi|60475454|gb|EAL73389.1| NOL1/NOP2/Sun family protein [Dictyostelium discoideum AX4]
Length = 680
Score = 140 bits (352), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 94/262 (35%), Positives = 127/262 (48%), Gaps = 46/262 (17%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G A+K L ++ I ALA++ ++ KV DL+ + PRYVRVNTL D D
Sbjct: 97 GQAKKLLSHYQAPINSALARMKIQKKVSENIDLLPDNIRYPITLPRYVRVNTLFNDCDEN 156
Query: 81 VLE--------------------------------------------LGKQFVVQKDDLV 96
++ LG++ Q D
Sbjct: 157 CIKNVIEHFVNVEGFELLSKPPKLQTKSITIKKENGTVEQQQQTTIILGEKEFYQDLDF- 215
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
P++LI DLH H +++NG + LQ KAS + + L+P PG +D+CSAPGNKT L+
Sbjct: 216 PEILIFHHAVDLHDHKMLLNGQIILQDKASCLPSFILSPPPGSVCIDSCSAPGNKTSLLS 275
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
A MK GKI A E + +R L K S NIE ++ FLNL DP + +V IL D
Sbjct: 276 AQMKNTGKIFAIEKDTKRCGTLIKLTKRSLCKNIETINDSFLNLKHDDPKFKDVEYILCD 335
Query: 217 PSCSGSGTAAERLDHLLPSHAS 238
PSCSGSG RLD+LLP+ S
Sbjct: 336 PSCSGSGI-VNRLDYLLPTKYS 356
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 32/41 (78%)
Query: 253 LSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L+ FQ ++H+ +FP V++V+YSTCS HQVENEDV+K +
Sbjct: 450 LADFQLSIIQHSFAFPNVKKVIYSTCSTHQVENEDVVKRAI 490
>gi|127799886|gb|AAH82753.2| NOL1/NOP2/Sun domain family, member 5C [Homo sapiens]
Length = 315
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/196 (40%), Positives = 112/196 (57%), Gaps = 8/196 (4%)
Query: 98 DLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAA 157
+LL+ P DLH HPL G + LQ +AS + A L P+ KT HLAA
Sbjct: 3 ELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHLAA 62
Query: 158 LMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217
L+K +GKI A +L+ R+ + + +G + E+ DFL + P DP Y EV +LLDP
Sbjct: 63 LLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLLDP 122
Query: 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYST 277
SCSGSG + +L+ T P RL+ L+ FQ++AL HAL+FP ++R+VYS
Sbjct: 123 SCSGSGMPSRQLE-----EPGAGTPSPV---RLHALAGFQQRALCHALTFPSLQRLVYSM 174
Query: 278 CSIHQVENEDVIKSVL 293
CS+ Q ENED+++ L
Sbjct: 175 CSLCQEENEDMVQDAL 190
>gi|342186008|emb|CCC95493.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 550
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 109/328 (33%), Positives = 146/328 (44%), Gaps = 104/328 (31%)
Query: 65 PRYVRVNTLKMDVDSAVLELGK----------------------------------QFVV 90
PRY RVNTLK+DVDS V L + QF +
Sbjct: 150 PRYARVNTLKIDVDSLVERLRRSSEKREREEPVPAFDTEPPRHHHVCHRVAAQGLPQFTL 209
Query: 91 QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL----------------- 133
D +VP LL+ PPG DLH HP + +G + LQ +AS + L
Sbjct: 210 --DPIVPSLLVFPPGTDLHAHPAVRSGQLVLQDRASCLPVCVLLDAVEVCVPFHSRRGVD 267
Query: 134 -----------APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
AP ++DAC+APGNKT LAAL KI+A E ++ER + L+ +
Sbjct: 268 GCSNSNATTSGAPPALEYIVDACAAPGNKTTQLAALGAPHVKIMAIERDEERAKLLQRRV 327
Query: 183 KLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP-----SH 236
+ GAA+ + V++ DFL + +D +E ILLDPSCS SG R+D L +
Sbjct: 328 QTLGAADYVNVVNMDFLKMSREDREATE--GILLDPSCSASGVVT-RVDVSLTKKQRLTA 384
Query: 237 ASGHTADPTE------------------------------MERLNKLSAFQKKALRHA-L 265
A H D E ER+ L+ Q+K L H+ L
Sbjct: 385 ADAHATDDLEAARGTADAGADKDAVGAISVELQGANFASNTERVMGLARLQRKLLAHSLL 444
Query: 266 SFPGVERVVYSTCSIHQVENEDVIKSVL 293
SF VVYSTCS+H+ ENEDV++ VL
Sbjct: 445 SFDNCRTVVYSTCSVHEAENEDVVRQVL 472
>gi|193700064|ref|XP_001946119.1| PREDICTED: putative methyltransferase NSUN5-like [Acyrthosiphon
pisum]
Length = 459
Score = 139 bits (351), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 97/277 (35%), Positives = 134/277 (48%), Gaps = 40/277 (14%)
Query: 62 VPKPRYVRVNTLKMDVD--------------------SAVLEL-------GKQFVVQKDD 94
V KPR+ RVNTL ++ + LEL G+ VQ D
Sbjct: 2 VMKPRFFRVNTLLTTLEKILEKLSELKFIKLKTPKSYAQFLELIKSDKFKGRNVFVQ-DI 60
Query: 95 LVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVH 154
+ +LL+ + NG + +Q KAS + A L PK VLD C+APG KT H
Sbjct: 61 HIKELLVFNSKVKFYEIEEYNNGSLIVQDKASCLAAYLLNPKSNSTVLDMCAAPGMKTSH 120
Query: 155 LAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214
LAA+M+ GK+ A + +KER L++ ++ G N+E + D L P Y +V+ IL
Sbjct: 121 LAAIMQNTGKLYAVDRSKERFYILQNMLEKYGVQNVETFNMDALTF----PYYDDVKYIL 176
Query: 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERV 273
LDPSCSGSG + + +SG + RL KL+ + L HAL S+P +ER+
Sbjct: 177 LDPSCSGSGIVDR-----VRNDSSGQNQNF--QTRLKKLANVHAQLLNHALKSYPNLERL 229
Query: 274 VYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNG 310
VYSTCS + ENE V+ L I F T G
Sbjct: 230 VYSTCSANHEENEAVVDEALSINGKFKLLDCTKMVKG 266
>gi|254576939|ref|XP_002494456.1| ZYRO0A01892p [Zygosaccharomyces rouxii]
gi|238937345|emb|CAR25523.1| ZYRO0A01892p [Zygosaccharomyces rouxii]
Length = 465
Score = 139 bits (350), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 91/263 (34%), Positives = 137/263 (52%), Gaps = 30/263 (11%)
Query: 66 RYVRVNTLKMDVDSAVLELGKQF-------------VVQKDDLVPDLLILPPGCDLHVHP 112
R++R+N LK D+ V +L K+F + D+ VP+L + P + H
Sbjct: 153 RWIRINPLKCDIPVVVEQLNKKFPHRVDHWDQLSPGSIYYDEYVPNLFGIHPSEKITSHD 212
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM--------KGKGK 164
L G V +Q +AS + A L P V+DAC+APGNKT HLAA + G+ +
Sbjct: 213 LYKQGKVIIQDRASCLPAHILNPGKEDVVMDACAAPGNKTTHLAAHIISAAGDSNGGQAQ 272
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLH-GDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
I A E R + L+ +G ++ +H GDF L D + +V A L+DPSCSGSG
Sbjct: 273 IHAFEKEPARAKVLQKMTSQAGCGSLVKIHVGDFTRLAVPD-QFEDVTAALVDPSCSGSG 331
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
+ +S + D +RL+KLS+FQ + ++HA+S P ++VYSTCS+H
Sbjct: 332 IFGRK-----SLESSNDSQDQKLQDRLSKLSSFQFQVVKHAMSMPNARKIVYSTCSVHAE 386
Query: 284 ENEDVIKSVL--PIAMSFGFQLA 304
ENE V+ +L +G+QL+
Sbjct: 387 ENERVVIDLLLDSKVKEWGWQLS 409
>gi|388578940|gb|EIM19271.1| S-adenosyl-L-methionine-dependent methyltransferase [Wallemia sebi
CBS 633.66]
Length = 476
Score = 139 bits (349), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 152/308 (49%), Gaps = 42/308 (13%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA ++ HK ++ L ++ V+ V S +L ++ PRYVR+NT ++ D
Sbjct: 95 PIKDA---ILRHKTRLRGELTKIRVKAGVSSNLELARKAESGAEMIPRYVRINTNRIKFD 151
Query: 79 SAVLELGKQFVVQK---DDL------------VPDLLILPPGC--DLHVHPLIVNGCVFL 121
A+ ++ F ++ D+ +P L+ + L + NG + L
Sbjct: 152 DAIKKISDNFKLESYTGSDMPIPSNKYKVIEHIPGLIAVNTSISQQLTSDKMYTNGEIIL 211
Query: 122 QGKASSMVAAAL------APKPGWK----------VLDACSAPGNKTVHLAALMKGKGKI 165
Q AS M L G + V+D +APGNKT L+AL+ +GK+
Sbjct: 212 QDLASCMPPIVLLDELQKGNNKGKRKADNDNHVGTVIDGTAAPGNKTTLLSALLGNEGKV 271
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+A E +R L+ +K +G AN+ GDF DP ++ +V ILLDPSC+GSG
Sbjct: 272 LAFEHVPKRFETLEKMVKTAGCANVTCNLGDFTKCDP--ASHPDVTHILLDPSCTGSGI- 328
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
RLD+L A ERLN L+AFQ+ + HA+ FP V R+VYSTCSIH EN
Sbjct: 329 VNRLDYLTEQENDDKDAHD---ERLNSLAAFQEMIIGHAMKFPNVRRIVYSTCSIHDDEN 385
Query: 286 EDVIKSVL 293
E V+ + L
Sbjct: 386 EMVVMNTL 393
>gi|401837791|gb|EJT41665.1| YNL022C-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 490
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 167/333 (50%), Gaps = 49/333 (14%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSI-EDLMALYQTPDVPKPRYVRVNT 72
+HP+ + +++ K + + +L ++ KV+ + E +++ T D+P R++R+N
Sbjct: 107 KHPI------KDYVLKFKSPLHSEMVKLKLKLKVRDLSEVVLSEDITNDLPPVRWIRINP 160
Query: 73 LKM----DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIV 115
LK D + + EL K+F ++ D+ +P+L + P + H L
Sbjct: 161 LKCHPNGDTEPVLAELRKKFTLKVNKWSDLVPGSIYYDEYIPNLFGIHPTDKITAHELYK 220
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM-KGKGK-----IVACE 169
+G + +Q +AS A L P V+DACSAPGNKT H A+ + G K I A E
Sbjct: 221 HGKIIIQDRASCFPAHILHPGADDIVIDACSAPGNKTTHTASYICSGPPKDNIIRIYAFE 280
Query: 170 LNKERVRRLKDTIKLSG-AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+ ER + L+ +K++G ++NI+V GDF L D ++DPSCSGSG +
Sbjct: 281 KDPERAKILQKMVKVAGCSSNIDVKVGDFTKLATPDKCKGAT-GFIVDPSCSGSGIFGRK 339
Query: 229 L---------------DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV 273
+ ++P A RL KLS+FQ + ++HA+SFP +++
Sbjct: 340 FFDSLNKRKMDEKDDDNDVIPDEQEEFMAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKI 399
Query: 274 VYSTCSIHQVENEDVIKSVL--PIAMSFGFQLA 304
VYSTCSIH ENE V+ +L +G+++A
Sbjct: 400 VYSTCSIHAEENERVVIDLLLDKAVQEWGWKVA 432
>gi|365758662|gb|EHN00494.1| YNL022C-like protein [Saccharomyces cerevisiae x Saccharomyces
kudriavzevii VIN7]
Length = 490
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 167/333 (50%), Gaps = 49/333 (14%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSI-EDLMALYQTPDVPKPRYVRVNT 72
+HP+ + +++ K + + +L ++ KV+ + E +++ T D+P R++R+N
Sbjct: 107 KHPI------KDYVLKFKSPLHSEMVKLKLKLKVRDLSEVVLSEDITNDLPPVRWIRINP 160
Query: 73 LKM----DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIV 115
LK D + + EL K+F ++ D+ +P+L + P + H L
Sbjct: 161 LKCHPNGDTEPVLAELRKKFTLKVNEWSDLVPGSIYYDEYIPNLFGIHPTDKITAHELYK 220
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM-KGKGK-----IVACE 169
+G + +Q +AS A L P V+DACSAPGNKT H A+ + G K I A E
Sbjct: 221 HGKIIIQDRASCFPAHILHPGADDIVIDACSAPGNKTTHTASYICSGPPKDNIIRIYAFE 280
Query: 170 LNKERVRRLKDTIKLSG-AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+ ER + L+ +K++G ++NI+V GDF L D ++DPSCSGSG +
Sbjct: 281 KDPERAKILQKMVKVAGCSSNIDVKVGDFTKLATPDKCKGAT-GFIVDPSCSGSGIFGRK 339
Query: 229 L---------------DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV 273
+ ++P A RL KLS+FQ + ++HA+SFP +++
Sbjct: 340 FFDSLNKRKMDEKDDDNDVIPDEQEEFMAKEELQTRLAKLSSFQFQMVKHAMSFPAAKKI 399
Query: 274 VYSTCSIHQVENEDVIKSVL--PIAMSFGFQLA 304
VYSTCSIH ENE V+ +L +G+++A
Sbjct: 400 VYSTCSIHAEENERVVIDLLLDKAVQEWGWKVA 432
>gi|223999623|ref|XP_002289484.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974692|gb|EED93021.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 612
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 117/335 (34%), Positives = 152/335 (45%), Gaps = 70/335 (20%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++ ++ H+ A+++ Q +N + A PRYVRVNTL+ V
Sbjct: 104 GRLKRMIIKHENALRIEADQYAAKNG-----GVGAGVDEDGANFPRYVRVNTLRSTVAEM 158
Query: 81 VLELGKQF-------------------VVQKDDLVPDLLILPPGCD--LHV-HPLIVNGC 118
V L K + D VPDLL++ P LH H + +G
Sbjct: 159 VDVLTKDLEDANGAKEGGKSTPTDLKQTIYADAHVPDLLVMHPFTSSLLHQKHEAVKSGK 218
Query: 119 VFLQGKASSMVAAALA------PKPGWKVLDACSAPGNKTVHLAALM------------- 159
V LQ K+S A LA P V+DACSAPGNKT HLA L+
Sbjct: 219 VVLQDKSSCFSALVLARGNSNKPLTSCDVIDACSAPGNKTCHLATLINDSIGATTDERPS 278
Query: 160 --KGKGK--------IVACELNKERVRRLKDTIKL-------SGAANIEV----LHGDFL 198
K KGK I A E + R L+ ++L S + +V H DFL
Sbjct: 279 KRKKKGKNDAKPMSTIFAFERSSTRFSLLQSRMQLFIPPVGDSNGISTQVAVVPTHADFL 338
Query: 199 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQK 258
DP D + VRAILLDPSCSGSG D + S T + + R+ L+ FQ
Sbjct: 339 KADPNDTQLANVRAILLDPSCSGSGIV-NNPDRWMED--SNDTNESEKKRRIQSLANFQL 395
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
AL+HA+SFP V+RVVYSTCSI+ ENE VI L
Sbjct: 396 VALKHAMSFPKVDRVVYSTCSINNEENEVVIGKAL 430
>gi|242778825|ref|XP_002479317.1| NOL1/NOP2/sun domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218722936|gb|EED22354.1| NOL1/NOP2/sun domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 546
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 118/347 (34%), Positives = 164/347 (47%), Gaps = 75/347 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLM--------ALYQTPDVPK---PRYVRVNTLKMDVD 78
HK ++ L + VR SI+DL AL+ ++ + PR+VR+N +K
Sbjct: 103 HKVRLKAELTKARVRRNCASIQDLQSVILAEKRALFGHDELTESMHPRWVRINNVKSTF- 161
Query: 79 SAVLELGKQFVVQKDDL--------------VPDLLILPPGC-DLHVHPLIVNGCVFLQG 123
SA +E + D L +PDL+ L PG D NG + LQ
Sbjct: 162 SAQMETSFSNYQKVDQLSELKSANQIYIDAHIPDLVALAPGTVDFSSLNAYRNGEIILQD 221
Query: 124 KASSMVAAAL-----APKPGWKVLDACSAPGNKTVHLAALM-----------KGKGKIVA 167
KAS A L +P G ++D C+APGNKT HL++L+ GK KI++
Sbjct: 222 KASCFPAYLLLGDKESPWDGGDLVDGCAAPGNKTTHLSSLLTARQKVHTEKKSGKSKIIS 281
Query: 168 CELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+ + R + L+ + ++GA + VL G DFL LDP+D + V +LLDPSCSGSG
Sbjct: 282 MDASAPRSKILQKMVSVAGADKLVTVLAGQDFLALDPEDERFESVTGLLLDPSCSGSGII 341
Query: 226 AERLD---HLLP--------SHASGHTADPTE----------------MERLNKLSAFQK 258
R D +LP S+ PTE ERL KLS Q
Sbjct: 342 G-RDDVPKLILPEQGKISKSSNRGTKRKRPTEDESTKQREAQETNNMDTERLVKLSNLQT 400
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
+ HAL+FP RV YSTCSIH +ENE V++ VL IA G+++
Sbjct: 401 HIVEHALTFPAATRVTYSTCSIHILENECVVERVLSSKIAKKRGWRI 447
>gi|363750830|ref|XP_003645632.1| hypothetical protein Ecym_3325 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889266|gb|AET38815.1| Hypothetical protein Ecym_3325 [Eremothecium cymbalariae
DBVPG#7215]
Length = 496
Score = 137 bits (345), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 94/270 (34%), Positives = 138/270 (51%), Gaps = 39/270 (14%)
Query: 61 DVPKPRYVRVNTLKMD--VDSAVLELGKQF-------------VVQKDDLVPDLLILPPG 105
D+ R++R+N + VD + EL K+F + +D+ +P+L + P
Sbjct: 161 DMSPVRWIRINPFRCQGKVDDVLKELRKKFPKQVDDWTQIVPGSIYRDEYIPNLYGVHPS 220
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG-- 163
+ H L G + +Q +AS A L P P V+DACSAPGNKT H+AA + G
Sbjct: 221 DKITSHELYKRGKIIIQDRASCFPAYILNPTPHDVVIDACSAPGNKTTHIAAHIFPDGNA 280
Query: 164 ---KIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219
KI A E + +R L+ + +G + I++ GDF L K + +V +LDPSC
Sbjct: 281 SDVKIYAFERDAKRAEILEKMVTSAGCESCIQISVGDFTQL-AKPQMFKDVTGFILDPSC 339
Query: 220 SGSGTAAE---------RLDHLLPSHASGHTADPTEME-------RLNKLSAFQKKALRH 263
SGSG +L +P+ DP EME RL KLS+FQ + ++H
Sbjct: 340 SGSGIFGRQSVDLANKSKLAEKVPNEVF-EEQDPKEMEQNELYKTRLAKLSSFQFQIVKH 398
Query: 264 ALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
A+SFP +++VYSTCSIH ENE V+ +L
Sbjct: 399 AMSFPNAKKLVYSTCSIHAEENERVVIDLL 428
>gi|332022336|gb|EGI62648.1| Putative methyltransferase NSUN5 [Acromyrmex echinatior]
Length = 631
Score = 137 bits (345), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 89/245 (36%), Positives = 128/245 (52%), Gaps = 36/245 (14%)
Query: 62 VPKPRYVRVNTLKMDVDSAVL------------------------ELGKQFVVQKDDLVP 97
V +PRYVRVNTL + V+ A+ +L + + +Q D +P
Sbjct: 133 VKRPRYVRVNTLLLSVEKAISLFQEDGWQLLPKSTTYSSYLQSLSQLSEPYFIQ-DLHIP 191
Query: 98 DLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAA 157
++L PP H H G + LQ KASS+ L P G VLD C+APG K H+AA
Sbjct: 192 EMLAFPPSTIFHNHEGYRGGKLILQDKASSLPVHLLNPISGSTVLDMCAAPGMKATHVAA 251
Query: 158 LMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217
++ G I A E++ +R + L ++ + A +E L+ D L L+ K YS V IL+DP
Sbjct: 252 KLQNNGTIYAVEIDAKRFKTLLTQLEKTHALCVEPLNQDVLTLNSK--LYSHVEYILVDP 309
Query: 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYS 276
+CSGSG +D S G E++RL L +FQ LR+AL +FP +R++YS
Sbjct: 310 TCSGSGI----VDRPKQSEMDGM----PELKRLKNLQSFQVYLLRYALFNFPNAKRIIYS 361
Query: 277 TCSIH 281
TCS+H
Sbjct: 362 TCSLH 366
>gi|344233839|gb|EGV65709.1| hypothetical protein CANTEDRAFT_101870 [Candida tenuis ATCC 10573]
Length = 496
Score = 137 bits (344), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 102/303 (33%), Positives = 154/303 (50%), Gaps = 44/303 (14%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA + HK + L +L ++ K+KS+E+ L D R+ RVN +K+
Sbjct: 98 PIKDA---FLQHKTRLTSELIKLKLKYKIKSVEEFPNLKGQNDETPIRWFRVNQIKITTA 154
Query: 79 ---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVN------G 117
S + E+ + +DD VP+L +H LI+ G
Sbjct: 155 VFFEKYDFFKKLQPVSDISEITSTGFLYQDDFVPNLY------GVHNRELIMKSDAYAKG 208
Query: 118 CVFLQGKASSMVAAALAPKPGWK---VLDACSAPGNKTVHLAALMKGK--GKIVACELNK 172
+ +Q +AS L P ++ ++DAC+APGNKT H A+ + K + A E +
Sbjct: 209 ELIIQDRASCFPGHILFNDPQFQPTHIIDACAAPGNKTTHTASYLYDKPSSVVYAFERDN 268
Query: 173 ERVRRLKDTIKL-SGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+RV LK L S N I++ H DF +++P D + ++ A+++DPSCSGSG ++
Sbjct: 269 KRVEILKKMCNLASNKPNLIQITHADFTSVNPND--FKDIEALVVDPSCSGSGIFGRAIE 326
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIK 290
L H + ERLNKLS FQ ++HALSFPG ++VVYSTCSIH ENE V+
Sbjct: 327 DSLEQHK-----EEISTERLNKLSRFQFSIMKHALSFPGAKKVVYSTCSIHAEENERVVV 381
Query: 291 SVL 293
+L
Sbjct: 382 DLL 384
>gi|448508269|ref|XP_003865911.1| hypothetical protein CORT_0A00790 [Candida orthopsilosis Co 90-125]
gi|380350249|emb|CCG20470.1| hypothetical protein CORT_0A00790 [Candida orthopsilosis Co 90-125]
Length = 462
Score = 136 bits (343), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 101/313 (32%), Positives = 163/313 (52%), Gaps = 45/313 (14%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ +A ++ HK +Q +L ++ KVKS++ L + P R+ R+N++K+D +
Sbjct: 91 PIKEA---VLAHKTRLQAEFIKLKLKYKVKSVQQLPTKDNDDETP-VRWFRINSIKIDPE 146
Query: 79 ---------------SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
++ +L + + DD +P+L + P L + G V +Q
Sbjct: 147 RFFKKHAFFSKLQPVNSFQDLTEPGFIYADDHIPNLYGIHPKEKLSLTEAYRLGEVIIQD 206
Query: 124 KASSMVAAALA-PKPGWKVLDACSAPGNKTVHLAALM--KGKGKIVACELNKERV---RR 177
+AS A L K K++DAC+APGNKT H A+ + K I E +++RV R+
Sbjct: 207 RASCFPAHILNHNKEHVKIIDACAAPGNKTSHAASYLPHDEKSVIYGVERDEKRVGILRK 266
Query: 178 LKD-TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
+ + + S I+VLH DF ++P+D + +V +++DPSCSGSG
Sbjct: 267 MSERALGKSKKKLIQVLHNDFTKINPED--FPDVTGLIVDPSCSGSGIF----------- 313
Query: 237 ASGHTADPTEM--ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL- 293
G +D E +RL KL++FQ ++HALSFP +VVYSTCSIH ENE V+ +L
Sbjct: 314 --GRASDEEESNDQRLEKLASFQVIIMKHALSFPNARKVVYSTCSIHAEENERVVIDLLS 371
Query: 294 -PIAMSFGFQLAT 305
P + G++LA+
Sbjct: 372 DPQVQAQGWKLAS 384
>gi|350645045|emb|CCD60275.1| williams-beuren syndrome critical region protein, putative
[Schistosoma mansoni]
Length = 573
Score = 136 bits (342), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 102/308 (33%), Positives = 155/308 (50%), Gaps = 18/308 (5%)
Query: 13 LRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKS-IEDLMALYQTPDVPKPRYVRVN 71
LRH V K ++G + L N +K+ + D++ +T + +Y R
Sbjct: 131 LRHAYQSVNKLSKSQTENRGQNKGLLPCYARVNFLKTKLADVIEKLETCGFKQVKYDRSE 190
Query: 72 TLKMDVDSAVLELGK-QFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
T V +L + +F++ D +P LL + P G L+ L + + +Q KAS
Sbjct: 191 TSYRKFRKKVCKLDRGEFML--DYHLPHLLLVFPSGTALYDLELYKSKSLLIQDKASCFG 248
Query: 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189
L P P VLDAC+APGNKT+ L +++ K I ++++ + K +I+ S +
Sbjct: 249 PEILQPDPNSDVLDACAAPGNKTLQLISMLSNKSTIFV--VDRDPNSKHKKSIQ-SSQPS 305
Query: 190 IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA-------ERLDHLLPSHASGHTA 242
IE DFL++DP +S V++ILLDPSCSGSG + E+ D + +
Sbjct: 306 IEAYCSDFLSIDPYHRKFSNVQSILLDPSCSGSGLSIRQPDGGDEQFDKFTHKKSDNYID 365
Query: 243 DPTE--MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
+E RL +LS Q L+HA FP V+RVVYSTCSIH ENE V++ + +S
Sbjct: 366 VYSEEYSSRLKRLSNLQAMLLKHAFKFPNVQRVVYSTCSIHPEENESVVREIANY-VSDK 424
Query: 301 FQLATPFP 308
F L T +P
Sbjct: 425 FYLETIWP 432
>gi|452985598|gb|EME85354.1| hypothetical protein MYCFIDRAFT_108693, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 507
Score = 135 bits (341), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 101/306 (33%), Positives = 145/306 (47%), Gaps = 63/306 (20%)
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGK----------QFVVQK---------DDLVPDLL 100
P PR++R+NTLK + L G Q ++Q D +P+LL
Sbjct: 145 PPARHPRWMRINTLKTTLHDE-LNHGTFSNYTQVATLQEIIQAHPELRAVHIDKHIPNLL 203
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALM 159
+ D G + LQ KAS A L P+PG K +DAC+APGNKT HLAA++
Sbjct: 204 AVASPDDPTTFKAYRTGKLILQEKASCFPACLLDPRPGDSKAIDACAAPGNKTTHLAAIL 263
Query: 160 KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDP 217
+++ACE + ER + L ++L+GA I + +F LDP ++V +LLDP
Sbjct: 264 GENSRVIACEKDAERSKTLAKMVQLAGADGIVDVKAKQNFTTLDPNSAECADVTDLLLDP 323
Query: 218 SCSGSGTAAERLDHL---LPSHASGHTA-------------------------------D 243
SCSGSG + LPS A+ A D
Sbjct: 324 SCSGSGIFGRDEASITVHLPSAANDEAAPKGKKRKRGSERKAEANPHEQDAIVEETVDED 383
Query: 244 PTEM----ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAM 297
P + +RL LSAFQ + ++HA+SFP R+ YSTCS+H ENE V+ + L IA
Sbjct: 384 PVDAAKLKDRLRNLSAFQLRIVQHAMSFPSARRITYSTCSLHAEENEHVVINALLSDIAA 443
Query: 298 SFGFQL 303
+ G+++
Sbjct: 444 AQGWKV 449
>gi|407420069|gb|EKF38445.1| hypothetical protein MOQ_001347 [Trypanosoma cruzi marinkellei]
Length = 529
Score = 135 bits (339), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 105/309 (33%), Positives = 142/309 (45%), Gaps = 78/309 (25%)
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLEL------------GKQFVVQK--------------- 92
P++ PRY RVNTLK+DVD+ V L G Q Q+
Sbjct: 165 PELQIPRYARVNTLKIDVDTLVERLHRAAEKRGREDDGSQGKEQQRNGKKPHHAKGFRHL 224
Query: 93 -----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL-------------A 134
D +VP LL+ P G DLH HP + +G + LQ +AS + A L A
Sbjct: 225 SAFTMDPVVPSLLVFPAGTDLHAHPAVRSGQLILQDRASCLPACVLLDAVEVVRPSSIEA 284
Query: 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVL 193
P ++DAC+APGNKT HLAAL KI+A E +++R L ++ GA + + V+
Sbjct: 285 SAPLEYIVDACAAPGNKTTHLAALGAPHVKIMAVERDEKRADLLSRRVQSLGAGDYVNVV 344
Query: 194 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE------- 246
+ DF + D +E ILLDPSCS SG R+D L A+ E
Sbjct: 345 NMDFFQMSSADREATE--GILLDPSCSASGVWT-RVDVSLMRQRQARLAEVGEENRGEEG 401
Query: 247 ---------------------MERLNKLSAFQKKALRHA-LSFPGVERVVYSTCSIHQVE 284
+R+ L+ Q+K L HA LSF VVYSTCS+H+ E
Sbjct: 402 AGNNETWAISPEEHGTEFASNTDRVMGLARLQRKLLAHALLSFDNCRTVVYSTCSVHEEE 461
Query: 285 NEDVIKSVL 293
NE V++ VL
Sbjct: 462 NEFVVRQVL 470
>gi|289741935|gb|ADD19715.1| proliferation-associated nucleolar protein NOL1 [Glossina morsitans
morsitans]
Length = 400
Score = 135 bits (339), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 129/262 (49%), Gaps = 38/262 (14%)
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFVVQK-------DDLVPDLLILPPG---CDLHVHPL 113
KPRYVR+NT + + A L + + + DD + + L D+HV L
Sbjct: 96 KPRYVRINTHIVSIADAHTVLAENWCKKDCPPFENYDDFLKAVETLEENEYMADMHVDDL 155
Query: 114 IV----------------NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAA 157
++ + LQ KA+ + L P G +LD C+APG KT+HL+
Sbjct: 156 LIFHSKQKYFWATHEYTESKKFMLQDKATCLATIILNPPIGSIILDMCAAPGMKTIHLSN 215
Query: 158 LMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217
+K +G I A E + ER R L+ K + NI+ + D L + P+ +V ILLDP
Sbjct: 216 FVKNQGTIYAIEKDAERYRLLRSMTKKAKCRNIKPIEADVLTVTPEQCP--DVEYILLDP 273
Query: 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYST 277
CSGSG + + + +RL KL Q K L HA++FP V+R+VYST
Sbjct: 274 PCSGSGM----------QNRMCLNPEVNDAQRLQKLGGLQIKLLNHAMNFPQVKRIVYST 323
Query: 278 CSIHQVENEDVIKSVLPIAMSF 299
CSIH+ ENEDV+K L + +F
Sbjct: 324 CSIHREENEDVVKKCLHLNPTF 345
>gi|340959726|gb|EGS20907.1| hypothetical protein CTHT_0027460 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 658
Score = 134 bits (338), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 105/328 (32%), Positives = 148/328 (45%), Gaps = 77/328 (23%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVP-KPRYVRVNTLKMDVDSAVLELGKQF 88
HK +Q + +R K +++ L A + P PR+VRVN +K VD + + F
Sbjct: 101 HKARLQAEFTKARIRRKCPTLDALKAAVEAQLGPVHPRWVRVNVIKTTVDDQLATTFRGF 160
Query: 89 ------------------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVA 130
V+ D VP+LL + PG DL G + LQ KAS A
Sbjct: 161 EVVPGIDEVIASAGMEKKVLCLDPHVPNLLAVSPGVDLTKTDAYKAGEIILQDKASCFPA 220
Query: 131 AALAPKP-GWKVLDACSAPGNKTVHLAALM----------KGKGKIVACELNKERVRRLK 179
L P+ ++DACSAPGNKT HLAA++ K K +I A E + ER + L+
Sbjct: 221 YLLDPRTEDGDIIDACSAPGNKTTHLAAVLHPRRGFAAGQKRKQRIFAFEKDPERAKTLE 280
Query: 180 DTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD----HL- 232
+ ++GA V+ G DFL +DP P Y+ V A+LLDPSCSG+G R D HL
Sbjct: 281 KMVAMAGADRDVVIRGGQDFLKVDPYAPEYAHVGALLLDPSCSGTGIVG-RDDAPEFHLP 339
Query: 233 -LPSHASGHTADPTEME--------------------------------------RLNKL 253
+PS ++P + + RL L
Sbjct: 340 SVPSQGKNAKSNPKKRKHQTTASGFPQPSSSNPNITVADDNGNTTVLSSPATFKARLASL 399
Query: 254 SAFQKKALRHALSFPGVERVVYSTCSIH 281
+AFQ ++HA+ FP ++ YSTCSIH
Sbjct: 400 AAFQLAIIQHAMKFPAATKITYSTCSIH 427
>gi|156051912|ref|XP_001591917.1| hypothetical protein SS1G_07363 [Sclerotinia sclerotiorum 1980]
gi|154705141|gb|EDO04880.1| hypothetical protein SS1G_07363 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 627
Score = 134 bits (337), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 111/358 (31%), Positives = 154/358 (43%), Gaps = 85/358 (23%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT--------PDVPKPRYVRVNTLKM----DV 77
HKG +Q L + +R K+ ++E L A +T + P PR++R+NTLK +
Sbjct: 102 HKGRLQAELTKARLRRKMSTMEALKAYVETGQENATDTSEAPYPRWIRINTLKSTLQDQL 161
Query: 78 DSAVLELGKQFVVQK-----------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+S E + + D +P+L+ + P DL +G + Q KAS
Sbjct: 162 ESTFTEFERAATIDAVRHRGSKRIYIDVHIPNLIAISPNIDLSKSEAYKSGQIIFQDKAS 221
Query: 127 SMVAAALAP-KPGWKVLDACSAPGNKTVHLAALM--------KGKGKIVACELNKERVRR 177
A L P ++D+CSAPGNKT H+AA++ + I A E NK R
Sbjct: 222 CFPAYLLDPLAEDGDIIDSCSAPGNKTTHIAAILVDRLPEPDESTQVIHAFEKNKGRAET 281
Query: 178 LKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD----H 231
L + L+G+ LH DFL DP Y V A+LLDPSCSGSG R D H
Sbjct: 282 LDKMVNLAGSNTFTTLHAGHDFLKTDPNSGTYKNVGALLLDPSCSGSGIVG-RDDMPELH 340
Query: 232 L-----LPSHASGH------------------------------------TADPTEME-- 248
L L S H TA T+ E
Sbjct: 341 LPGIKELSVKPSRHKKKPKKAPEPVEPNKKRKREDEEDKLEVMVDDDGVVTAVDTDAELQ 400
Query: 249 -RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
RL L+ FQ + L HA +P ++ YSTCSIH ENE V++ L IA G+++
Sbjct: 401 SRLAALAEFQLELLLHAFKYPAARKITYSTCSIHAEENESVVQKALASDIAKERGWKI 458
>gi|171685978|ref|XP_001907930.1| hypothetical protein [Podospora anserina S mat+]
gi|170942950|emb|CAP68603.1| unnamed protein product [Podospora anserina S mat+]
Length = 605
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 106/330 (32%), Positives = 151/330 (45%), Gaps = 72/330 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIE---DLM-ALYQTPDVPKPRYVRVNTLKMDVDSAVLELG 85
HK + + +R K +IE DL+ A Y P V PR++RVN +K +D+ +
Sbjct: 102 HKARLTSEFTKARIRRKCPTIETFRDLIEAEYAGP-VQHPRWIRVNAIKSTLDAQLETTF 160
Query: 86 KQF-----------------VVQKDDLVPDLLILPPGC-DLHVHPLIVNGCVFLQGKASS 127
K F V+ D +P+L+ +PP D G + LQ KAS
Sbjct: 161 KGFEVVPSITQVMTAPRKKKVLCLDGHIPNLIAVPPSVLDFTKTEAYKKGEIILQDKASC 220
Query: 128 MVAAALAPKP-GWKVLDACSAPGNKTVHLAALMKGKG-----KIVACELNKERVRRLKDT 181
A L P+P ++DACSAPGNKT HLA ++ +G I A E ++ R + L+
Sbjct: 221 FPAYLLDPRPEDGDIIDACSAPGNKTTHLAGILSERGFARGQTIHAFEKDRNRAKTLQKM 280
Query: 182 IKLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTA-------------- 225
IK++G+ V+H DFL DP+ Y+ V A+LLDPSCSGSG
Sbjct: 281 IKIAGSDAKTVVHPAEDFLRADPQAEEYAHVGALLLDPSCSGSGIVGRDDVPELCLPEAL 340
Query: 226 ------------------AERLDHLLPSHASGHTADPTE---------MERLNKLSAFQK 258
AE + + P+ A D E +R+ L+AFQ
Sbjct: 341 ASKNKPGNGKSGNKKRKRAEGEEEMKPAPAMMVDDDGQETVVSSEKDLQQRIEALAAFQL 400
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDV 288
+ + HA FP +V YSTCS+H+ ENE V
Sbjct: 401 QIVLHAFEFPNARKVTYSTCSVHKGENEGV 430
>gi|366995709|ref|XP_003677618.1| hypothetical protein NCAS_0G03790 [Naumovozyma castellii CBS 4309]
gi|342303487|emb|CCC71266.1| hypothetical protein NCAS_0G03790 [Naumovozyma castellii CBS 4309]
Length = 492
Score = 134 bits (337), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 91/270 (33%), Positives = 138/270 (51%), Gaps = 42/270 (15%)
Query: 61 DVPKPRYVRVNTLKMDVDSAVLELGKQF-------------VVQKDDLVPDLLILPPGCD 107
D+ R++R+N L+ DV++ LE+ K+F + D+ +P+L + P
Sbjct: 149 DMTPVRWIRINPLRCDVEATKLEIQKKFPTRVENWSDIVPGSIYYDEYIPNLFGIHPQDK 208
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KG 161
+ H L G + +Q +AS A L P V+D C+APGNKT H A+ M
Sbjct: 209 ITSHNLYKQGKIIIQDRASCFPAHILHPDENDVVIDGCAAPGNKTTHTASYMIKEPSKDP 268
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCS 220
K +I A E N ER + L IK++G + NI++ GDF + + Y +V ++DPSCS
Sbjct: 269 KIQIYAFEKNPERAKILDKMIKVAGCSKNIKINVGDFTKIALPE-KYKDVTGFIVDPSCS 327
Query: 221 GSGTAAER-LDHLLPSHASGHTADPTEME--------------------RLNKLSAFQKK 259
GSG + +D L + AD E + RL+KLS+FQ +
Sbjct: 328 GSGIFGRKFIDSLNRKKMNKDEADKKEGDEEEEVPDEQEEYNKREDLKTRLSKLSSFQFQ 387
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVI 289
++HA+SFP +++VYSTCSIH ENE V+
Sbjct: 388 VVKHAMSFPNAKKIVYSTCSIHAEENERVV 417
>gi|425780854|gb|EKV18850.1| hypothetical protein PDIG_07230 [Penicillium digitatum PHI26]
gi|425783091|gb|EKV20960.1| hypothetical protein PDIP_11880 [Penicillium digitatum Pd1]
Length = 573
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 111/364 (30%), Positives = 162/364 (44%), Gaps = 91/364 (25%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALY--------QTPDVPKPRYVRVNTLKMDVDSAV 81
HK ++ + VR S+E A+ T PR+VR+N ++ ++ +
Sbjct: 101 HKARLKAEFTKARVRRGCASVEQFKAVVIREKRLADGTSHFVYPRWVRINNIRTTLEEQL 160
Query: 82 LELGKQF--------VVQKDDL--------------VPDLLILPPGCDLHVHPLIVNGCV 119
K + + +D+L +PDL+ +P G D NG +
Sbjct: 161 STTFKSYRRVDTLAELAPEDELESRKPEPRLFIDPNIPDLVAVPFGADFTASSAYKNGEI 220
Query: 120 FLQGKASSMVAAAL----APKPGWK--VLDACSAPGNKTVHLAALM--KGKG------KI 165
LQ KAS A L P W+ ++D C+APGNKT HLA+L+ + KG +I
Sbjct: 221 ILQDKASCFPAYLLLGDRGPSDPWEGDLVDGCAAPGNKTTHLASLLAKQQKGNKNSNQRI 280
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
+ + + R R L+ + L+GA ++ VL G DFL LDP+D + +V +LLDPSCSGSG
Sbjct: 281 FSMDASTVRSRTLQKMVGLAGADSVTVLQGQDFLALDPEDEQFEKVTGLLLDPSCSGSGI 340
Query: 225 AAERLD---HLLP---------SHASGH---------------------TADPTEM---- 247
R D LP SH A+PT+
Sbjct: 341 IG-RDDVPQFTLPVAAAYKAPKSHGKKRKRPDNDDEAIGEQSKATMGNPQAEPTDENDIA 399
Query: 248 ------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSF 299
ERL KLS+ Q + + HAL F V YSTCSIH +ENE V+ +L +A
Sbjct: 400 DGTIDPERLTKLSSIQARIVEHALRFSNATHVTYSTCSIHLIENEGVVARILNSQVAKER 459
Query: 300 GFQL 303
G++L
Sbjct: 460 GWRL 463
>gi|452845875|gb|EME47808.1| hypothetical protein DOTSEDRAFT_146789 [Dothistroma septosporum
NZE10]
Length = 565
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 139/309 (44%), Gaps = 73/309 (23%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQK--------------------DDLVPDLLILPP 104
PR++R+N LK +D EL F DD +PDL+ +
Sbjct: 150 PRWLRINALKTTLDK---ELSSSFANYTKVESLQDITNAAKQSRLLFVDDHIPDLIAIAG 206
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALMKGKG 163
+ G + +Q KAS A L PKPG V+DAC+APGNKT H AAL+ G
Sbjct: 207 PENPTTLRSYKTGRLIIQEKASCFPACLLDPKPGEGDVIDACAAPGNKTTHAAALLTGSS 266
Query: 164 -KIVACELNKERVRRLKDTIKLSGAANIEVL--HGDFLNLDPKDPAYSEVRAILLDPSCS 220
+++ACE + ER + L+ +KL+G + DFL L P ++ V ++LLDPSCS
Sbjct: 267 FRVIACEKDAERSKTLEKMVKLAGGDKAISIKPKQDFLKLKPASKEFANVVSLLLDPSCS 326
Query: 221 GSG-------TAAERLDHLLPSH----------ASGHTADPTEME--------------- 248
GSG T RL L AS A P + E
Sbjct: 327 GSGIFGRDEATVTVRLPTLTSDEPTSRSKKRKRASQQPATPKQPEPEPETQDIIEEETPT 386
Query: 249 ------------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP-- 294
RL+KLS FQ + HA+SFP +R+ YSTCSI+ ENEDV+ L
Sbjct: 387 DLAADDEAKLKARLDKLSTFQLHIVLHAMSFPAAKRITYSTCSIYATENEDVVVKALASR 446
Query: 295 IAMSFGFQL 303
IA G+ +
Sbjct: 447 IAAERGWTI 455
>gi|322698408|gb|EFY90178.1| NOL1/NOP2/sun domain protein, putative [Metarhizium acridum CQMa
102]
Length = 587
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 105/348 (30%), Positives = 154/348 (44%), Gaps = 76/348 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIE----DLMALYQTPDVPKPRYVRVNTLKMD--------- 76
HKG + + +R K S+E + + PR+VR+N +K
Sbjct: 102 HKGRLSSEFTRARLRRKAPSLELLKVQVEKAAAGEEAAHPRWVRINAIKSTLEEQLETTF 161
Query: 77 --------VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
+ V + GK ++ D VP+L+ + PGCDL +G + LQ KAS
Sbjct: 162 RGYARAGTIQDVVAKEGKHILI--DPHVPNLVAVTPGCDLSKAEAYNSGKIILQDKASCF 219
Query: 129 VAAALAPKP-GWKVLDACSAPGNKTVHLAALMKGK--------GKIVACELNKERVRRLK 179
A L P+ V+DAC+APGNKT HLA +++ I A E + R + L+
Sbjct: 220 PAYLLDPRSEDGDVIDACAAPGNKTTHLAGIIRSHEPEFESQPQTIFAFEKDSRRAKTLE 279
Query: 180 DTIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA-ERLDHLL--- 233
+K++G++ + L DFL +DP+ + V A+LLDPSCSGSG + + L
Sbjct: 280 KMVKIAGSSKMTRIALGQDFLQVDPESERFRNVGALLLDPSCSGSGIVGRDSMPELHLPD 339
Query: 234 -PSHASGHTA--------------------------DPTEM---------ERLNKLSAFQ 257
P GH + D E+ RLN L+ FQ
Sbjct: 340 PPRQNPGHKSKSESTNKRKRKYDQVRDSNQTVIRDDDGNEIVVESEKDLAARLNALAGFQ 399
Query: 258 KKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
L HA FP +V YSTCSIH ENEDV+ + L +A G+++
Sbjct: 400 LTILLHAFRFPSARKVTYSTCSIHSEENEDVVMAALKSDVAKERGWRI 447
>gi|444316758|ref|XP_004179036.1| hypothetical protein TBLA_0B06960 [Tetrapisispora blattae CBS 6284]
gi|387512076|emb|CCH59517.1| hypothetical protein TBLA_0B06960 [Tetrapisispora blattae CBS 6284]
Length = 508
Score = 134 bits (336), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 88/287 (30%), Positives = 140/287 (48%), Gaps = 53/287 (18%)
Query: 59 TPDVPKPRYVRVNTLKM----DVDSAVLELGKQFV-------------VQKDDLVPDLLI 101
T D+ R++R+N +++ D +LEL K+F + D+ +P+L
Sbjct: 151 TDDITPVRWIRINPIRIPKQKSSDDIILELRKKFTTKVDHWSKIKPGCIYYDEYIPNLFG 210
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ P + H L NG + +Q +AS A L P ++DAC+APGNKT H+A+ +
Sbjct: 211 ISPTDKITSHELYKNGKIIIQDRASCFPAHILNATPDDYIIDACAAPGNKTTHVASYIMS 270
Query: 162 ----------KGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEV 210
K ++ A E + ER + L +K++G +E+ GDF + + Y V
Sbjct: 271 LNNDTHINFDKKRVFAFEKDPERSKILDKMVKIAGCKKLVEINTGDFTKIATPE-KYPNV 329
Query: 211 RAILLDPSCSGSG----------TAAERLDHLLPSHASGHTAD-PTEME----------- 248
++DPSCSGSG + ++L + D P E E
Sbjct: 330 TGFIVDPSCSGSGIFGRKFIDNINSNKKLTEKVKDEGEDDEQDIPLEQETLAEAKAKDDL 389
Query: 249 --RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL+KLS+FQ + ++HA+SFP +++VYSTCSIH ENE V+ +L
Sbjct: 390 ETRLSKLSSFQFQVVKHAMSFPSAKKIVYSTCSIHAEENERVVIDLL 436
>gi|313235158|emb|CBY25030.1| unnamed protein product [Oikopleura dioica]
Length = 417
Score = 134 bits (336), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 98/305 (32%), Positives = 147/305 (48%), Gaps = 37/305 (12%)
Query: 25 KFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL 84
K +K ++ L + V+ K EDL+ T +P RY RVN L + E
Sbjct: 91 KIFTKYKSVLKNGLTLMKVKRKATCNEDLLPKDVTTHMP--RYARVNLLAGKTAKEIEET 148
Query: 85 GKQ-----------FVVQKDDLVPDLLILPPG--------CDLHVHPLIVN--GCVFLQG 123
K+ FV ++ +++ P ++ L +N G + +Q
Sbjct: 149 LKESFNVLKPTPESFVQTALEMTSKDVLVDPSLKGLFAFHSSTNIADLFLNKEGYLIIQD 208
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
+AS + LAPK G VLD +APGNKT LA+ + KGK++ACE + +R R L +K
Sbjct: 209 RASCLPPFVLAPKEGETVLDCTAAPGNKTHQLASAVGRKGKVIACEADPKRFRLLSSRMK 268
Query: 184 -LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
L +E D+L +D +S+ I+LDPSCSGSG A R+
Sbjct: 269 QLYAGEIVESKFQDYLKIDVTQKPWSDCTKIMLDPSCSGSGMAHRRI---------MQEQ 319
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ 302
DP ER+ L+ FQ++AL A +FP + + YSTCS H EN +V+ +VL A S ++
Sbjct: 320 DPK--ERIESLAKFQEEALLKATTFPNAKEISYSTCSTHDRENNEVVNAVLANAQS--WE 375
Query: 303 LATPF 307
+A F
Sbjct: 376 VANAF 380
>gi|406860023|gb|EKD13084.1| NOL1/NOP2/sun family protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 672
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 113/361 (31%), Positives = 155/361 (42%), Gaps = 88/361 (24%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQ--------TPDVPKPRYVRVNTLKMDVDS-- 79
HKG + L + +R K+ S+E A + T D P PR+VR+NTLK ++
Sbjct: 102 HKGRLHAELVKARIRRKISSLEAFKAFIEEGLENEADTSDAPYPRWVRINTLKTTLEDQL 161
Query: 80 ----AVLELGKQFVVQK---------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
A LE + D +P+L+ + DL +G + Q KAS
Sbjct: 162 ESTFAGLERATSIAAVRKRGTKRLFIDHHIPNLVAISASFDLTKSLAYKSGHIIFQDKAS 221
Query: 127 SMVAAALAPKP-GWKVLDACSAPGNKTVHLAALM--------KGKGKIVACELNKERVRR 177
A L P P ++DACSAPGNKT HLA+++ I A E NK R
Sbjct: 222 CFPAYMLDPLPQDGDIVDACSAPGNKTTHLASILLEHSSEPKHCSQTIYAFEKNKGRAET 281
Query: 178 LKDTIKLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD----H 231
L+ + L+G+ + + DFL DPK P +V A+LLDPSCSGSG R D H
Sbjct: 282 LEKMVNLAGSDTLTKIRPGHDFLKSDPKSPQMQKVGALLLDPSCSGSGIIG-RDDMPELH 340
Query: 232 L--LPSHASGHTADP------------------------------------------TEM 247
L L + A H A P +E
Sbjct: 341 LPVLKAAAPKHGARPPKKNAKLKASEPTPESRKRKREEHDPAMDVMVDDDGEVTAISSED 400
Query: 248 E---RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQ 302
E RL LS FQ + L HA FP +++ YSTCS+H ENE V++ L P G++
Sbjct: 401 ELKNRLEALSKFQLELLLHAFKFPSAQKITYSTCSVHAEENETVVQKALEQPSVREAGWR 460
Query: 303 L 303
+
Sbjct: 461 I 461
>gi|295657461|ref|XP_002789299.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283969|gb|EEH39535.1| conserved hypothetical protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 555
Score = 134 bits (336), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 109/347 (31%), Positives = 158/347 (45%), Gaps = 73/347 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALY---------QTPDVPKPRYVRVNTLKMDVDS- 79
HK I+ + VR + S+E+L AL + + PR+VRVN + +D
Sbjct: 101 HKSRIRAEFVKSRVRRRCGSVEELKALIAKEKRQYGAEKESLVSPRWVRVNKVLTTLDKE 160
Query: 80 ------------AVLELGKQF--VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
++LEL +D +PDLL +P G +L G + LQ KA
Sbjct: 161 LNTTFASYKSAPSLLELSPSVPQTYYRDPNIPDLLAVPQGVELTSSTAYKRGRIILQDKA 220
Query: 126 SSMVAAAL-APKP-GWK--VLDACSAPGNKTVHLAALM------KGKG------KIVACE 169
S A L P WK ++D C+APGNKT HLA+LM +G G I +C+
Sbjct: 221 SCFPAYLLLGDNPEQWKGDLIDGCAAPGNKTTHLASLMCSDTEFRGGGLVQKKPIIFSCD 280
Query: 170 LNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSG---- 223
++ R L+ + ++G + +L G DFL L+P D + V +LLDPSCSGSG
Sbjct: 281 ASQSRSNILQRMVSVAGVDKLVSILPGQDFLALNPCDKRFHNVTGLLLDPSCSGSGIVGR 340
Query: 224 -----------------------TAAERLDHLLPSHASGHTADP--TEMERLNKLSAFQK 258
T ++D + + P + +RL KLS Q
Sbjct: 341 DDVPRLALPTMSGPSYWSKKRKRTVRAQMDGVCFALGDPEDQSPINVDYDRLLKLSNLQT 400
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
+ + HA +FP RV YSTCSIH ENE V+ VL P+A G+++
Sbjct: 401 RIIEHAFNFPAATRVTYSTCSIHAQENEVVVSRVLKSPVARRRGWRI 447
>gi|256053079|ref|XP_002570036.1| williams-beuren syndrome critical region protein [Schistosoma
mansoni]
Length = 611
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 97/292 (33%), Positives = 148/292 (50%), Gaps = 17/292 (5%)
Query: 13 LRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKS-IEDLMALYQTPDVPKPRYVRVN 71
LRH V K ++G + L N +K+ + D++ +T + +Y R
Sbjct: 131 LRHAYQSVNKLSKSQTENRGQNKGLLPCYARVNFLKTKLADVIEKLETCGFKQVKYDRSE 190
Query: 72 TLKMDVDSAVLELGK-QFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
T V +L + +F++ D +P LL + P G L+ L + + +Q KAS
Sbjct: 191 TSYRKFRKKVCKLDRGEFML--DYHLPHLLLVFPSGTALYDLELYKSKSLLIQDKASCFG 248
Query: 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189
L P P VLDAC+APGNKT+ L +++ K I ++++ + K +I+ S +
Sbjct: 249 PEILQPDPNSDVLDACAAPGNKTLQLISMLSNKSTIFV--VDRDPNSKHKKSIQ-SSQPS 305
Query: 190 IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA-------ERLDHLLPSHASGHTA 242
IE DFL++DP +S V++ILLDPSCSGSG + E+ D + +
Sbjct: 306 IEAYCSDFLSIDPYHRKFSNVQSILLDPSCSGSGLSIRQPDGGDEQFDKFTHKKSDNYID 365
Query: 243 DPTE--MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292
+E RL +LS Q L+HA FP V+RVVYSTCSIH ENE V++ +
Sbjct: 366 VYSEEYSSRLKRLSNLQAMLLKHAFKFPNVQRVVYSTCSIHPEENESVVREI 417
>gi|405120865|gb|AFR95635.1| nuclear protein [Cryptococcus neoformans var. grubii H99]
Length = 560
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 101/312 (32%), Positives = 147/312 (47%), Gaps = 35/312 (11%)
Query: 18 WPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVN------ 71
WP A +M H+ ++ L ++ +R EDL + + RY+R N
Sbjct: 124 WPPKPA---VMRHQARLKAELVRIQIREGKTKKEDLAK--SSGEGEAVRYIRYNPNAGRP 178
Query: 72 ----------TLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVH-PLIVNGCVF 120
+D V + ++ L LL P + V G V
Sbjct: 179 LEELEEYLEKKGYTKLDEPVYPIPEEKYFADPHLSDVLLAFPGSANWWVDDEWYEGGGVI 238
Query: 121 LQGKASSMVAAALAPKPGW-----KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 175
LQ KAS A L + W + LDA SAPGNKT +++ALM +GK+ A E + R
Sbjct: 239 LQDKASCFPARVLMEE--WVEGEGECLDATSAPGNKTSYVSALMANRGKLHAFERSPNRF 296
Query: 176 RRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
+ L+ + + +N++ DF + DPK + V ILLDPSCSGSG RLD+L+
Sbjct: 297 KTLEKMLAKARCSNVQAQRADFTDTDPKSKEFKNVTRILLDPSCSGSGI-VNRLDYLVDD 355
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP- 294
++ ERL KL++FQ + + HA FP +R+VYSTCSIH E+E V+ + L
Sbjct: 356 DTE---ESDSKTERLEKLASFQLQMILHAFKFPSAQRIVYSTCSIHPEEDERVVMAALQS 412
Query: 295 -IAMSFGFQLAT 305
A G+ LAT
Sbjct: 413 NTAKENGWCLAT 424
>gi|401888434|gb|EJT52392.1| nucleus protein [Trichosporon asahii var. asahii CBS 2479]
Length = 585
Score = 133 bits (334), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 86/223 (38%), Positives = 119/223 (53%), Gaps = 30/223 (13%)
Query: 93 DDLVPD-LLILPPGCDLHV-HPLIVNGCVFLQGKASSMVAAALAPKPG------------ 138
D +PD LL+ G + + G V LQ KAS M AA + +P
Sbjct: 202 DPHLPDYLLVFESGSNWWLGSQWYERGSVILQDKASCMPAAVIMAEPASSSSSSKKSQSP 261
Query: 139 ----WK----VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190
W+ +D SAPGNKT ++AL I A E + +R + L+ +K++G N+
Sbjct: 262 PKSQWEEYPDCIDGTSAPGNKTSLMSAL--STSNIYAFEKSPQRFKTLERMLKIAGCDNV 319
Query: 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
+ + DF ++DP D Y V ILLDPSCSGSG RLD+L+ D ERL
Sbjct: 320 QAQNEDFTSVDPND--YPTVGRILLDPSCSGSGIV-NRLDYLVDGEEENEAGD---QERL 373
Query: 251 NKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+KL+ FQ + L+HAL FP V R+VYSTCSIH+ E+E V+ +L
Sbjct: 374 DKLAGFQVQMLQHALKFPNVTRIVYSTCSIHKTEDESVVSRIL 416
>gi|322707142|gb|EFY98721.1| NOL1/NOP2/sun domain protein [Metarhizium anisopliae ARSEF 23]
Length = 587
Score = 133 bits (334), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 106/348 (30%), Positives = 152/348 (43%), Gaps = 76/348 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT----PDVPKPRYVRVNTLKMD--------- 76
HKG + + +R K S+E L A + PR+VR+N +K
Sbjct: 102 HKGRLSSEFTRARLRRKASSLELLKAQVDKAAAGEEAAHPRWVRINAIKSTLEEQLETTF 161
Query: 77 --------VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
+ V + GK ++ D VP+L+ + PGCDL +G + LQ KAS
Sbjct: 162 RGYARAGTIQDVVAKEGKHILI--DPHVPNLVAITPGCDLSKTEAYNSGKIILQDKASCF 219
Query: 129 VAAALAPKP-GWKVLDACSAPGNKTVHLAALMKGK--------GKIVACELNKERVRRLK 179
A L P+ V+DAC+APGNKT HLA +++ I A E + R + L+
Sbjct: 220 PAYLLDPRSEDGDVIDACAAPGNKTTHLAGIIRSHEPEFESQPQTIFAFEKDSRRAKTLE 279
Query: 180 DTIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA----------- 226
+K++G+ + L DFL +DP+ + V A+LLDPSCSGSG
Sbjct: 280 KMVKIAGSNKMTRIALGQDFLQVDPESERFRNVGALLLDPSCSGSGIVGRDSMPELHLPD 339
Query: 227 ------ERLDHLLPSHA----------SGHTA----DPTEM---------ERLNKLSAFQ 257
R P++ S T D E+ RLN L+ FQ
Sbjct: 340 PPQQNPRRESKSEPTNKRKRKYEEIRNSNQTVIRDDDGNEIVVESEKDLAARLNALAGFQ 399
Query: 258 KKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
L HA FP +V YSTCSIH ENE V+ + L +A G+++
Sbjct: 400 LTILLHAFRFPSARKVTYSTCSIHSQENEHVVMAALNSDVAKERGWRI 447
>gi|367000381|ref|XP_003684926.1| hypothetical protein TPHA_0C03400 [Tetrapisispora phaffii CBS 4417]
gi|357523223|emb|CCE62492.1| hypothetical protein TPHA_0C03400 [Tetrapisispora phaffii CBS 4417]
Length = 494
Score = 132 bits (333), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 97/324 (29%), Positives = 160/324 (49%), Gaps = 51/324 (15%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTP-DVPKPRYVRVNT 72
+HPL +++++ +K +++ + +L V+ K+KS DL++ D+ R+ R+N
Sbjct: 107 KHPL------KEYVLKYKTSLRSEMVKLQVKMKLKSWGDLISSQDDANDITPVRWFRINP 160
Query: 73 LKM----DVDSAVLELGKQF-------------VVQKDDLVPDLLILPPGCDLHVHPLIV 115
++ V+ + EL K+F + D+ +P+L + + H L
Sbjct: 161 IRTPLSKGVEGILEELEKKFPTRVDHWSKIEQGTIYHDEFIPNLFGVHTKDKITSHELYK 220
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG------KGKIVACE 169
G + +Q +AS A L P V+D+C+APGNKT H AA + G K +I A E
Sbjct: 221 QGKIIIQDRASCFPAHVLNPGKDDIVIDSCAAPGNKTTHTAAYILGGPSKDQKIQIHAFE 280
Query: 170 LNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+ ER + L+ ++ +G A IEV GDF + + + V ++DPSCSGSG +
Sbjct: 281 KDPERAKVLQKMVRTAGCARTIEVNVGDFTKIATPE-KFKNVTGFIVDPSCSGSGIFGRK 339
Query: 229 LDHLLPSHASGHTAD--------PTEME-----------RLNKLSAFQKKALRHALSFPG 269
L G D P E + RL+KL++FQ + ++HA++FP
Sbjct: 340 FIDTLNKKKEGEDVDEDDESESIPVEQDEEFSKKDDLKTRLSKLASFQFQVVKHAMTFPK 399
Query: 270 VERVVYSTCSIHQVENEDVIKSVL 293
++VYSTCSIH ENE V+ +L
Sbjct: 400 ARKLVYSTCSIHAEENERVVIDLL 423
>gi|239612586|gb|EEQ89573.1| NOL1/NOP2/sun domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 555
Score = 132 bits (332), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 114/355 (32%), Positives = 156/355 (43%), Gaps = 86/355 (24%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK---------PRYVRVNTLKMDVDSA 80
HK I+ + VR + SIE+L AL P PR+VR+N + D
Sbjct: 101 HKVRIKAEFVRSRVRRRCASIEELKALVAKQKNPTGEGTTTLVPPRWVRINNVLTTFDE- 159
Query: 81 VLELGKQFVVQK------------------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
EL F K D +PDLL +P +L G + LQ
Sbjct: 160 --ELKTTFSSSKLVHSLSQLAAAAPQSYYQDPHIPDLLAVPQTAELTSSTAYKEGRIILQ 217
Query: 123 GKASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKG---------------KG 163
KAS A L W ++DAC+APGNKT HLA+L+ K
Sbjct: 218 DKASCFPAYLLLGGAVKQWTGDLMDACAAPGNKTTHLASLLCSGSEQCRDDLVGPAPQKC 277
Query: 164 KIVACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSG 221
KI +C+ ++ R + L+ + ++GA + VL G DFL + P+D + + +LLDPSCSG
Sbjct: 278 KIFSCDASQARSKILQRMVTVAGAGRMVSVLAGQDFLAISPEDKRFRTIAGLLLDPSCSG 337
Query: 222 SGTAAE----RLDHLLPS----------------------HA--SGHTADPT---EMERL 250
SG RL LPS HA + +PT + +RL
Sbjct: 338 SGIVGRDDIPRL--ALPSSHNPNPRSKKMKRTALAPVPCTHADPAADEEEPTPAIDHDRL 395
Query: 251 NKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
KLS Q + + HA SFP RV YSTCSIH ENE V+ L P+A G+++
Sbjct: 396 IKLSNLQTRIIEHAFSFPAARRVTYSTCSIHAQENEVVVSRALKSPVAQRRGWRI 450
>gi|443898947|dbj|GAC76280.1| proliferation-associated nucleolar protein [Pseudozyma antarctica
T-34]
Length = 538
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/332 (33%), Positives = 155/332 (46%), Gaps = 53/332 (15%)
Query: 18 WPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLM--ALYQTPDVPKPRYVRVNTLKM 75
WP A L ++ ++ AL ++ +R I+DL ALY PR++R+NTL+
Sbjct: 119 WPPKVA---LEKYRSSLHSALVKMQIRQGKARIQDLRSGALYHEMTARMPRWIRINTLRA 175
Query: 76 DVDSAVL-------------ELG--KQFVVQKDDLVPDLLILPPGCD--LHVHPLIVNGC 118
D + E+G K+F V K V LL P L + +
Sbjct: 176 TRDEVLAWLAEHSYTQVEADEIGGVKEFAVSKH--VQGLLAFHPKATSALLQTEMYRDNW 233
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM---------KGKGKIVACE 169
+ +Q AS A L P +V+DA SAPGNKT HL+A+M + +GK++A E
Sbjct: 234 IVMQDLASCFPAYILDPPADARVVDATSAPGNKTSHLSAIMFAKSSRRIGQSEGKVIAFE 293
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHG-------DFLNLDPKDPAYSEVRAILLDPSCSGS 222
+ R + L + GA + G DFL +P D + +V +LLDPSCSGS
Sbjct: 294 RDALRYKTLVKRLAAVGALAKDATTGNVIPERRDFLTTNPAD--FGDVTHMLLDPSCSGS 351
Query: 223 GTAAERLDHL--------LPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVV 274
G RLD L L + T + RL +L FQ +RHA FP + RVV
Sbjct: 352 GIV-NRLDFLKEDDDIDELEDTVAAETGETKLQRRLRQLGEFQLLMIRHAFKFPALRRVV 410
Query: 275 YSTCSIHQVENEDVIKSVL--PIAMSFGFQLA 304
YSTCS+H ENE V+ L A FG++LA
Sbjct: 411 YSTCSVHAQENEAVVIRALHSEEADKFGWRLA 442
>gi|261191660|ref|XP_002622238.1| NOL1/NOP2/sun domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239590004|gb|EEQ72647.1| NOL1/NOP2/sun domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 555
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 155/353 (43%), Gaps = 82/353 (23%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK---------PRYVRVNTLKMDVDSA 80
HK I+ + VR + SIE+L AL P PR+VR+N + D
Sbjct: 101 HKVRIKAEFVRSRVRRRCASIEELKALVAKQKNPTGEGTTTLVPPRWVRINNVLTTFDE- 159
Query: 81 VLELGKQFVVQK------------------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
EL F K D +PDLL +P +L G + LQ
Sbjct: 160 --ELKTTFSSSKLVHSLSQLAAAAPQSYYQDPHIPDLLAVPQTAELTSSTAYKEGRIILQ 217
Query: 123 GKASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKG---------------KG 163
KAS A L W ++DAC+APGNKT HLA+L+ K
Sbjct: 218 DKASCFPAYLLLGGAVKQWTGDLMDACAAPGNKTTHLASLLCSGSEQCRDDLVGPAPQKC 277
Query: 164 KIVACELNKERVRRLKDTIKLSGAANI-EVLHG-DFLNLDPKDPAYSEVRAILLDPSCSG 221
KI +C+ ++ R + L+ + ++GA + VL G DFL + P+D + + +LLDPSCSG
Sbjct: 278 KIFSCDASQARSKILQRMVTVAGAGRVVSVLAGQDFLAISPEDKRFRTIAGLLLDPSCSG 337
Query: 222 SGTAAE---------------------RLDHLLP---SHA--SGHTADPT---EMERLNK 252
SG + L P +HA + +PT + +RL K
Sbjct: 338 SGIVGRDDIPRLALPSSHNPNPRSKKMKRTALAPVPCTHADPAADEEEPTPAIDHDRLIK 397
Query: 253 LSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
LS Q + + HA SFP RV YSTCSIH ENE V+ L P+A G+++
Sbjct: 398 LSNLQTRIIEHAFSFPAARRVTYSTCSIHAQENEVVVSRALKSPVAQRRGWRI 450
>gi|145230151|ref|XP_001389384.1| NOL1/NOP2/sun domain protein [Aspergillus niger CBS 513.88]
gi|134055499|emb|CAK44014.1| unnamed protein product [Aspergillus niger]
Length = 572
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 143/320 (44%), Gaps = 85/320 (26%)
Query: 65 PRYVRVNTLKMDVDS---------------AVLELGKQFVVQKDDLVPDLLILPPGCDLH 109
PR+VRVN ++ ++ A L L K+ V+ D VPDL+ + PG +
Sbjct: 148 PRWVRVNNIRTTMEKQLSTTFAGYEQVSSLAELTLPKRMVL--DPHVPDLIAVAPGAEFT 205
Query: 110 VHPLIVNGCVFLQGKASSMVAAALA--PKPGWK----VLDACSAPGNKTVHLAALM---- 159
P NG + LQ KAS A L GW +LD C+APGNKT H+A+L+
Sbjct: 206 SSPAYKNGEIILQDKASCFPAYLLVGDEDEGWDTSKGLLDGCAAPGNKTTHMASLLAKQQ 265
Query: 160 -----------KGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPA 206
G I + + + R + L+ + +GA + VL G DFL LDP DP
Sbjct: 266 HTHKNKKGETANGTYHIFSMDQSPIRAKTLQKMVSTAGADTMVTVLPGQDFLALDPTDPR 325
Query: 207 YSEVRAILLDPSCSGSGTAA-------------------------ERLDHLLPSHASGHT 241
+ V +LLDPSCSGSG R + +H G
Sbjct: 326 FENVSGLLLDPSCSGSGIIGRDDVPKLTLPESTTSSSSSTGKKRKRRANDEDETH--GGK 383
Query: 242 ADPTEM----------------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
PTE ERL KLS Q + + HALSFP RV YSTCSIH +EN
Sbjct: 384 KPPTESPSATDENDVPVTGMTEERLIKLSNLQTRIVEHALSFPAATRVTYSTCSIHLLEN 443
Query: 286 EDVIKSVL--PIAMSFGFQL 303
E V+ +L +A + G+++
Sbjct: 444 EAVVSRILASEVAKTRGWRV 463
>gi|328869977|gb|EGG18352.1| NOL1/NOP2/Sun family protein [Dictyostelium fasciculatum]
Length = 707
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 89/254 (35%), Positives = 125/254 (49%), Gaps = 30/254 (11%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTL------- 73
G A+K ++ +K + +LA+L ++ +V S L+ + PRYVR+NTL
Sbjct: 95 GFAKKIVIGYKTQLNSSLARLKIKKQVSSNTGLLPESIRNPLVLPRYVRINTLAKKTQQT 154
Query: 74 ----------KMDVDSAVLELGK-----------QFVVQKDDLVPDLLILPPGCDLHVHP 112
K +L+ G +F Q +D +++I DLH
Sbjct: 155 DEQFIQQIIQKFKDRGFILKDGNTYQSKLDFSNDKFFYQDNDF-KEIIIFTSAIDLHDDE 213
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
L+ G + LQ KAS + + LAP PG V+D+CSAPGNKT L+ALM G+I A E +K
Sbjct: 214 LLTTGQIILQDKASCLPSYILAPPPGATVIDSCSAPGNKTSLLSALMGNTGRIYAIEKDK 273
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
+R L S NI ++ FL DP + +V IL DPSCSGSG RLDHL
Sbjct: 274 KRCGTLIKLTTRSQCKNITAINDSFLECSWDDPKFKDVEYILCDPSCSGSGI-VNRLDHL 332
Query: 233 LPSHASGHTADPTE 246
L +H + AD E
Sbjct: 333 LGNHFATDEADDVE 346
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
RL L+ FQ ++HA FP V++V YSTCSIHQ ENEDV+
Sbjct: 434 RLQTLADFQLSIIKHAFGFPNVKKVAYSTCSIHQTENEDVV 474
>gi|350638444|gb|EHA26800.1| hypothetical protein ASPNIDRAFT_35776 [Aspergillus niger ATCC 1015]
Length = 572
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/320 (32%), Positives = 143/320 (44%), Gaps = 85/320 (26%)
Query: 65 PRYVRVNTLKMDVDS---------------AVLELGKQFVVQKDDLVPDLLILPPGCDLH 109
PR+VRVN ++ ++ A L L K+ V+ D VPDL+ + PG +
Sbjct: 148 PRWVRVNNIRTTMEKQLSTTFAGYEQVSSLAELTLPKRMVL--DPHVPDLIAVAPGVEFT 205
Query: 110 VHPLIVNGCVFLQGKASSMVAAALA--PKPGWK----VLDACSAPGNKTVHLAALM---- 159
P NG + LQ KAS A L GW +LD C+APGNKT H+A+L+
Sbjct: 206 SSPAYKNGEIILQDKASCFPAYLLVGDEDEGWDTSKGLLDGCAAPGNKTTHMASLLAKQQ 265
Query: 160 -----------KGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPA 206
G I + + + R + L+ + +GA + VL G DFL LDP DP
Sbjct: 266 HTHKNKKGETANGTYHIFSMDQSPIRAKTLQKMVSTAGADTMVTVLPGQDFLALDPTDPR 325
Query: 207 YSEVRAILLDPSCSGSGTAA-------------------------ERLDHLLPSHASGHT 241
+ V +LLDPSCSGSG R + +H G
Sbjct: 326 FENVSGLLLDPSCSGSGIIGRDDVPKLTLPESTTSSSSSTGKKRKRRANDEDETH--GGK 383
Query: 242 ADPTEM----------------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
PTE ERL KLS Q + + HALSFP RV YSTCSIH +EN
Sbjct: 384 KPPTESPSATDENDVPVTGMTEERLIKLSNLQTRIVEHALSFPAATRVTYSTCSIHLLEN 443
Query: 286 EDVIKSVL--PIAMSFGFQL 303
E V+ +L +A + G+++
Sbjct: 444 EAVVSRILASEVAKTRGWRV 463
>gi|45187658|ref|NP_983881.1| ADL215Wp [Ashbya gossypii ATCC 10895]
gi|44982419|gb|AAS51705.1| ADL215Wp [Ashbya gossypii ATCC 10895]
gi|374107094|gb|AEY96002.1| FADL215Wp [Ashbya gossypii FDAG1]
Length = 484
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 100/320 (31%), Positives = 156/320 (48%), Gaps = 50/320 (15%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQ--TPDVPKPRYVRVN 71
+HPL + F++ H+ ++ A+ LV+ + DL L Q D R++R+N
Sbjct: 108 KHPL------KAFVLKHQTRLRGEYAKQLVKL---GVADLSVLVQDEREDATPVRWIRLN 158
Query: 72 TLKM--DVDSAVLELGKQF-------------VVQKDDLVPDLLILPPGCDLHVHPLIVN 116
++ + + EL K+F + +D+ V L + P + H L
Sbjct: 159 PFRIRGQREEVLQELQKKFPRRVADWRELTPGSIYEDEYVAGLYGVHPADKITSHELYKR 218
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG-----KIVACELN 171
G + +Q +AS A LAP ++DAC+APGNKT H+AA + +G +I A E +
Sbjct: 219 GKIIIQDRASCFPAQILAPGRSDVIIDACAAPGNKTTHVAAHIFPEGGADHAQIHAFERD 278
Query: 172 KERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+R + L+ I +G N IEV GDF D + + V ++DPSCSGSG +L
Sbjct: 279 PQRAKTLRKMIATAGCDNAIEVHVGDFTR-DAQPEIFKNVTGFIVDPSCSGSGIFGRQLV 337
Query: 231 HLLPSHASGHTADPT----EME-------------RLNKLSAFQKKALRHALSFPGVERV 273
G DP+ E E RL KLS+FQ + ++HA+SFP +++
Sbjct: 338 DATQETQKGTETDPSADVPEEETFEATKSAVELKNRLAKLSSFQFQIVKHAMSFPSAKKL 397
Query: 274 VYSTCSIHQVENEDVIKSVL 293
+YSTCS+H ENE V+ +L
Sbjct: 398 IYSTCSVHAEENERVVIDLL 417
>gi|327356906|gb|EGE85763.1| NOL1/NOP2/sun domain-containing protein [Ajellomyces dermatitidis
ATCC 18188]
Length = 555
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 111/353 (31%), Positives = 155/353 (43%), Gaps = 82/353 (23%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK---------PRYVRVNTLKMDVDSA 80
HK I+ + VR + SIE+L AL P PR+VR+N + D
Sbjct: 101 HKVRIKAEFVRSRVRRRCASIEELKALVAKQKNPTGEGTTTLVPPRWVRINNVLTTFDE- 159
Query: 81 VLELGKQFVVQK------------------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
EL F K D +PDLL +P +L G + LQ
Sbjct: 160 --ELRTTFSSSKLVHSLSQLAAAAPQSYYQDPHIPDLLAVPQTAELTSSTAYKEGRIILQ 217
Query: 123 GKASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKG---------------KG 163
KAS A L W ++DAC+APGNKT HLA+L+ K
Sbjct: 218 DKASCFPAYLLLGGAVKQWTGDLMDACAAPGNKTTHLASLLCSGSEQCRDDLVGPAPQKC 277
Query: 164 KIVACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSG 221
KI +C+ ++ R + L+ + ++GA + VL G DFL + P+D + + +LLDPSCSG
Sbjct: 278 KIFSCDASQARSKILQRMVTVAGAGRMVSVLAGQDFLAISPEDKRFRTIAGLLLDPSCSG 337
Query: 222 SGTAAE---------------------RLDHLLP---SHA--SGHTADPT---EMERLNK 252
SG + L P +HA + +PT + +RL K
Sbjct: 338 SGIVGRDDIPRLALPSSHNPNPRSNKMKRTALAPVPCTHADPAADEEEPTPAIDHDRLIK 397
Query: 253 LSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
LS Q + + HA SFP RV YSTCSIH ENE V+ L P+A G+++
Sbjct: 398 LSNLQTRIIEHAFSFPAARRVTYSTCSIHAQENEVVVSRALKSPVAQRRGWRI 450
>gi|345563613|gb|EGX46600.1| hypothetical protein AOL_s00097g616 [Arthrobotrys oligospora ATCC
24927]
Length = 602
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 97/306 (31%), Positives = 139/306 (45%), Gaps = 62/306 (20%)
Query: 65 PRYVRVNTLKMDVDS--------AVLELG-----------KQFVVQKDDLVPDLLILPPG 105
PR+VRVN L+ ++ A E+G ++ +K +++P++L + P
Sbjct: 151 PRWVRVNALQTTLEDSLSSPTFHAFQEVGSVSDMFFFDVVRKTYYRKAEILPNILAIHPS 210
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
D+ L +G + LQ +S + A L P G V+D C+APGNKT HLAAL+ GKI
Sbjct: 211 HDITSSELYKSGKIILQSASSCLPAIMLDPPKGSMVVDGCAAPGNKTTHLAALVGSSGKI 270
Query: 166 VACELNKERVRRLKDTIKLSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
A E ++ R L+ I +GA I + DF + PA+ + ILLDPSCSGSG
Sbjct: 271 FAVERDRRRADILEMMITKAGAEGIVTTLKATDFTTIMEGHPAW-QASYILLDPSCSGSG 329
Query: 224 -------------------------TAAERLDHLLPSHASGH-------------TADPT 245
+ D LP+ ++ D T
Sbjct: 330 ILQRVDWDISKLNLPSSDTTSSHPSKKKRKRDETLPNGSASQPEERETKQLEEEIQDDDT 389
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
ERL LS FQ + HA FP R+ YSTCS+H ENE V+ VL IA G+++
Sbjct: 390 SRERLQSLSDFQVAIILHAFLFPNARRITYSTCSVHAEENEHVVARVLNSEIAKERGWRV 449
Query: 304 ATPFPN 309
+ N
Sbjct: 450 QSRDEN 455
>gi|358365412|dbj|GAA82034.1| NOL1/NOP2/sun domain protein [Aspergillus kawachii IFO 4308]
Length = 542
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 105/316 (33%), Positives = 143/316 (45%), Gaps = 79/316 (25%)
Query: 65 PRYVRVNTLKMDVDS---------------AVLELGKQFVVQKDDLVPDLLILPPGCDLH 109
PR+VRVN ++ ++ A L L K+ V+ D VPDL+ + PG +
Sbjct: 148 PRWVRVNNIRTTLEKQLSTTFAGYEQVSSLAELTLPKRMVL--DPHVPDLIAVAPGAEFT 205
Query: 110 VHPLIVNGCVFLQGKASSMVAAALA--PKPGWK----VLDACSAPGNKTVHLAALM---- 159
P NG + LQ KAS A L GW +LD C+APGNKT H+A+L+
Sbjct: 206 SSPAYKNGEIILQDKASCFPAYLLVGDEDEGWDDGGGLLDGCAAPGNKTTHMASLLAKQQ 265
Query: 160 ------KGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVR 211
G I + + + R + L+ + +GA + VL G DFL LDP DP + V
Sbjct: 266 HKHNKETGTYHIFSMDQSPIRAKTLQKMVSTAGADTMVTVLPGQDFLALDPTDPRFENVS 325
Query: 212 AILLDPSCSGSG---------------------TAAERLDHL------------------ 232
+LLDPSCSGSG T +R
Sbjct: 326 GLLLDPSCSGSGIIGRDDVPKLTLPESTTASSSTGKKRKRRANDEDDSREGKKSPTTTTT 385
Query: 233 -LPSHASGHTADPTEM--ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
PS + T M ERL KLS Q + + HALSFP RV YSTCSIH +ENE V+
Sbjct: 386 ESPSATDENDVPVTGMTEERLIKLSNLQTRIVEHALSFPAATRVTYSTCSIHLLENEAVV 445
Query: 290 KSVL--PIAMSFGFQL 303
+L +A + G+++
Sbjct: 446 SRILASEVAKTRGWRV 461
>gi|343427822|emb|CBQ71348.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 579
Score = 131 bits (330), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 113/329 (34%), Positives = 149/329 (45%), Gaps = 54/329 (16%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLM--ALYQTPDVPKPRYVRVNTLK---------- 74
L ++ ++ AL +L +R I+DL ALYQ PR++R+NTL+
Sbjct: 136 LERYRPSLHSALVKLQIRQGKARIQDLRSGALYQEMTARMPRWIRINTLRATRDEVFDWL 195
Query: 75 -----MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCD--LHVHPLIVNGCVFLQGKASS 127
V + V ELG + VP LL P L + + V +Q AS
Sbjct: 196 RENRYTQVGAGVQELGNVKEFAESQHVPGLLAFHPKATSALLKSEMYRDNWVVMQDLASC 255
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK-------------GKIVACELNKER 174
A L P G V+DA SAPGNKT HL+A+M K G+I A E + R
Sbjct: 256 FPAYILDPPKGASVVDATSAPGNKTSHLSAIMFSKRSSSLAQRTDEDTGRIDAFERDAVR 315
Query: 175 VRRLKDTIKLSGA--------ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
+ L + GA N+ DFL P D Y V +LLDPSCSGSG
Sbjct: 316 YKTLVKRLAAVGALADKTTSTGNVHAQRRDFLTTQPAD--YPLVTHMLLDPSCSGSGIV- 372
Query: 227 ERLDHLLPSHASGHTADPTEM---------ERLNKLSAFQKKALRHALSFPGVERVVYST 277
RLD L H AD + RL++L FQ + +RHA +FP + R+VYST
Sbjct: 373 NRLDFLKEDDDVEHDADDADSADDSTSKLARRLHQLGEFQLRMVRHAFAFPALRRLVYST 432
Query: 278 CSIHQVENEDVIKSVL--PIAMSFGFQLA 304
CS+H ENE V+ L A FG+ LA
Sbjct: 433 CSVHAAENEAVVLRALHSDEAKEFGWTLA 461
>gi|121700599|ref|XP_001268564.1| NOL1/NOP2/sun domain protein, putative [Aspergillus clavatus NRRL
1]
gi|119396707|gb|EAW07138.1| NOL1/NOP2/sun domain protein, putative [Aspergillus clavatus NRRL
1]
Length = 565
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 111/368 (30%), Positives = 160/368 (43%), Gaps = 90/368 (24%)
Query: 8 GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALY----QTPDVP 63
G+ N HPL + + HK ++ + VR S+ DL A Q P
Sbjct: 85 GIAANANHPL------RQAIERHKTRLRGEFTKARVRRGCASVADLKAAVLREKQALGGP 138
Query: 64 -----KPRYVRVNTLKMDVD-------------SAVLELGKQFVVQ--KDDLVPDLLILP 103
PR+VR+N ++ +D +++ ELG + + D VPDL+ +
Sbjct: 139 VAAAVYPRWVRINNVRTTLDAQLRTTFKAYTRVTSLAELGGKDAARLYVDPHVPDLVAVA 198
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK--VLDACSAPGNKTVHLAALMK- 160
G D P NG + LQ KAS A L W +LD C+APGNKT H+A+L+
Sbjct: 199 QGVDFTASPAYKNGLIILQDKASCFPAYLLLGDEPWTGDLLDGCAAPGNKTTHMASLLAK 258
Query: 161 ------GKG----KIVACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYS 208
G G +I + + + R + L+ + +GA N + VL G DFL LDP + +
Sbjct: 259 NTPAQAGGGDSSPRIFSMDASAVRSKTLQKMVAAAGADNTVTVLPGQDFLALDPTESRFE 318
Query: 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME-------------------- 248
V +LLDPSCSGSG R D + +G + P++++
Sbjct: 319 NVTGLLLDPSCSGSGIIG-RDDVPKLALPAGPASAPSKLQSKKRKRRDEDDAPIASPKPT 377
Query: 249 ------------------------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
RL KLS Q + + HAL+FP RV YSTCSIH +E
Sbjct: 378 STSTSTSTSATDENELSSATLDPARLTKLSNLQARIVEHALAFPAAIRVTYSTCSIHLIE 437
Query: 285 NEDVIKSV 292
NE V+ V
Sbjct: 438 NEAVVSRV 445
>gi|150866641|ref|XP_001386307.2| hypothetical protein PICST_73698 [Scheffersomyces stipitis CBS
6054]
gi|149387897|gb|ABN68278.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 511
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 147/312 (47%), Gaps = 35/312 (11%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P+ DA + H+ +Q ++ ++ +VKS + D R+ R+NT+K+
Sbjct: 97 PIKDA---FLQHQTRLQAEFTKMKLKYRVKSASEFPTKEADEDETPIRWFRINTIKVASP 153
Query: 79 SAVLELGKQF----------------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
V E + + D+ +P+L + P L + G V +Q
Sbjct: 154 EKVFETNELLKNLQPVNSIDDIKDTGFIYHDEYIPNLYGIHPREKLTSTQAYIKGEVIIQ 213
Query: 123 GKASSMVAAALAPKPG---WKVLDACSAPGNKTVHLAALM-KGKGKIV-ACELNKERVRR 177
+AS L G +V+DAC+APGNKT H A+ + + + +V A E + +RV+
Sbjct: 214 DRASCFPGYILNQDSGDIHTEVIDACAAPGNKTTHSASFLPEDRSSVVYAFERDSKRVKI 273
Query: 178 LKDTI-KLSGAAN---IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL 233
LK K +G + I++ H DF P D + V ++DPSCSGSG L+
Sbjct: 274 LKTMCEKATGKSKKELIQITHADFTTTRPDD--FPNVTGFVVDPSCSGSGIFGRALEDSQ 331
Query: 234 PSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
D T RLNKL+ FQ K ++HAL FP ++VYSTCSIH ENE V+ +L
Sbjct: 332 KEEEKQQEIDTT---RLNKLAGFQFKIVKHALLFPSARKLVYSTCSIHPHENERVVVDLL 388
Query: 294 --PIAMSFGFQL 303
P S G+ L
Sbjct: 389 TDPEIKSRGWHL 400
>gi|195353701|ref|XP_002043342.1| GM10043 [Drosophila sechellia]
gi|194127456|gb|EDW49499.1| GM10043 [Drosophila sechellia]
Length = 534
Score = 131 bits (329), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 81/218 (37%), Positives = 119/218 (54%), Gaps = 20/218 (9%)
Query: 90 VQKDDLVPDL-----LILPPGCDLHV--HPLIVNGCVFLQGKASSMVAAALAPKPGWKVL 142
+++D+ + DL LI PP + HPL+ LQ KA+ + A LAP G VL
Sbjct: 274 LEEDEFMTDLHVEGVLIFPPKWSNYWVRHPLVHGKRFILQNKATCLAAELLAPPTGATVL 333
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
D C+APG KTVH+ +M+ KG I A E + +R L D + +G A ++ + D L+L P
Sbjct: 334 DMCAAPGMKTVHICNVMQNKGCIYAVEQDYKRYNTLCDITEEAGCAIVKPIFSDALDLTP 393
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
+ +++V IL+DPSCSGSG + +P + RL KL Q K L
Sbjct: 394 E--RFADVEYILVDPSCSGSGM----------QNRMTVCDEPKDDRRLQKLQGLQIKILS 441
Query: 263 HAL-SFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
HA+ SFP V+R+ Y TCS+ + ENE V++ L + S+
Sbjct: 442 HAMSSFPNVKRIAYCTCSLWKEENEQVVQRCLQLNPSY 479
>gi|380478061|emb|CCF43808.1| NOL1/NOP2/sun family protein, partial [Colletotrichum higginsianum]
Length = 527
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 107/346 (30%), Positives = 160/346 (46%), Gaps = 72/346 (20%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT---PDVPKPRYVRVNTLKMDVDSAV----- 81
HK + L + +R K+ S+E L A P+ PR++RVN L+ +V+ +
Sbjct: 123 HKARLASELTRARLRRKMPSVEALRADVNANADPEGRHPRWIRVNALRSNVEDQLETTFK 182
Query: 82 ---LELGKQFVVQK-------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAA 131
L + V Q D VP+LL PPG D+ P + G + LQ KAS A
Sbjct: 183 GWERALSIEAVTQSAGKAIFIDTHVPNLLAAPPGTDVTKTPAYLKGEIILQDKASCFPAY 242
Query: 132 ALAPKP-GWKVLDACSAPGNKTVHLAALMKG--------KGKIVACELNKERVRRLKDTI 182
L P+ V+D+C+APGNKT HLAA+++ + I A E + R + L+ +
Sbjct: 243 LLDPRSEDGDVVDSCAAPGNKTTHLAAIVQSHQPDQTTRQPTIFAFERDPRRAQTLEKMV 302
Query: 183 KLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE------------- 227
K++G+ + + DFL++DP+ AY V A+LLDPSCSGSG
Sbjct: 303 KIAGSRGMTKIGPGQDFLDVDPEADAYKHVGALLLDPSCSGSGIVGRDSMPELHLPELPG 362
Query: 228 --------------RLDHLLPSHAS----------GHTAD-PTEME---RLNKLSAFQKK 259
+ D L A G+ + +E E RL+ L+ FQ
Sbjct: 363 PAAAAAKGAKGAKGKADRLKRKRAEEERPVMVDDDGNAVEVQSEQELQKRLDALAGFQLT 422
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
L HA+ F ++ YSTCSIH ENE V+ L +A + G+++
Sbjct: 423 LLLHAMRFSSATKITYSTCSIHAEENEGVVVRALASTVAKARGWRV 468
>gi|328855456|gb|EGG04582.1| hypothetical protein MELLADRAFT_88623 [Melampsora larici-populina
98AG31]
Length = 359
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 97/264 (36%), Positives = 134/264 (50%), Gaps = 36/264 (13%)
Query: 68 VRVNTLKMDVDSAVLEL------------------GKQFVVQKDDLVPDLLILPPGCDLH 109
+RVN +K V+ AV KQ V +D + +L LP +++
Sbjct: 1 MRVNIIKWSVEDAVDWFVASGWTEIHFDDFIQRAEDKQQVFARDVHLTCVLALPRTVNIN 60
Query: 110 VHPLIVNGCVFLQGKASSMVAAAL--APKPGWK-----VLDACSAPGNKTVHLAALMKGK 162
++G + Q KAS M A L +P P V+DA +APGNKT L+AL+
Sbjct: 61 TLAPYLDGRLIAQDKASCMPAQLLLGSPTPEESKRRMCVIDATAAPGNKTTMLSALVGTS 120
Query: 163 GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222
GK+ A E + ER LK + +G N+E + GDFL++ DP + +V ILLDPSC S
Sbjct: 121 GKVWAFEKDPERFETLKSMVAKAGCRNVECILGDFLSVKTNDPRFHDVTHILLDPSCCMS 180
Query: 223 GTA-AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIH 281
G+ + RLDHL G D R+N L+ FQ L HAL F V +V YSTCSI
Sbjct: 181 GSGISNRLDHL-----DGSKRDEG---RINSLARFQTTILSHALRFKSVVQVAYSTCSIW 232
Query: 282 QVENEDVIKSVL--PIAMSFGFQL 303
+ E+E+V+ VL P G+QL
Sbjct: 233 REEDEEVVFRVLAKPEMSKKGWQL 256
>gi|294894842|ref|XP_002774979.1| williams-beuren syndrome critical region protein, putative
[Perkinsus marinus ATCC 50983]
gi|239880762|gb|EER06795.1| williams-beuren syndrome critical region protein, putative
[Perkinsus marinus ATCC 50983]
Length = 461
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 101/280 (36%), Positives = 150/280 (53%), Gaps = 50/280 (17%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQKDD-LVPDLLILPPGCD--LHVHPLIVNGCVFL 121
PRYVRVN ++ +SA+ +LG + K D L+PD++ + P L PL+ + + L
Sbjct: 123 PRYVRVNLAEISRESAIEQLGSAGIKSKADPLIPDVITVDPWNSKALIESPLVKDFTLVL 182
Query: 122 QGKASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKGK---GKIVACELNKER 174
Q + S + A +L +PG K V+DAC++PG+KT+H+ LM+ + G +VA EL+ +R
Sbjct: 183 QDRGSCLSAHSLLAGVQPGEKITVVDACASPGSKTIHMLQLMRYRKIEGTMVAMELDPKR 242
Query: 175 VRRLKDTIKLSG-----------------AA-----NIEVLHGDFLNLDPKDPAYSEVRA 212
+ L D + +G AA N+EV GDF+ + +EV
Sbjct: 243 AKVLLDRLAKAGFLPRDGTRTSEEVAHLSAAHSPDINVEVRVGDFIKY-----SSAEVTH 297
Query: 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVE 271
+ LDPSCSGSG L+ HA ++ +RL KLS+FQ + L HAL+ FP V+
Sbjct: 298 VNLDPSCSGSG--------LVDVHAD---SESVGAQRLRKLSSFQCRMLDHALTAFPAVQ 346
Query: 272 RVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGT 311
V YSTCSI EN +V+K L S G++ PF G+
Sbjct: 347 TVCYSTCSIKNEENGEVVKKALNRLQS-GYRREWPFEVGS 385
>gi|402467155|gb|EJW02504.1| hypothetical protein EDEG_03090 [Edhazardia aedis USNM 41457]
Length = 385
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 98/184 (53%), Gaps = 19/184 (10%)
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 175
NG + +Q +S + A L P P V+DAC+APGNKT LA++M GKI A E N +R
Sbjct: 174 NGEIIIQNYSSCLPAHVLNPPPKSFVIDACAAPGNKTSQLASIMGNTGKIFAYEKNHDRF 233
Query: 176 RRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
+ L + G N E DF + V IL+DPSCSGSG
Sbjct: 234 QTLNTMLAKHGVTNTETFCKDFTEAHIDNT----VEYILIDPSCSGSGI----------- 278
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPI 295
H + ERL KLS FQKK L HA+ F +++VYSTCS+++ ENE V++SVL
Sbjct: 279 ----HNFTKKDDERLKKLSFFQKKILLHAMKFKNAKKIVYSTCSVYEEENEMVVQSVLEE 334
Query: 296 AMSF 299
+F
Sbjct: 335 NTNF 338
>gi|21356579|ref|NP_650787.1| CG42358 [Drosophila melanogaster]
gi|7300487|gb|AAF55642.1| CG42358 [Drosophila melanogaster]
gi|17862234|gb|AAL39594.1| LD16340p [Drosophila melanogaster]
gi|220943050|gb|ACL84068.1| CG42358-PA [synthetic construct]
gi|220953274|gb|ACL89180.1| CG42358-PA [synthetic construct]
Length = 433
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 93/265 (35%), Positives = 131/265 (49%), Gaps = 40/265 (15%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKD--------DLVPDLLILPPG---CDLHV- 110
P PRYVR+NT + A+ L K +K+ D + + L DLHV
Sbjct: 126 PNPRYVRINTNLYSLAEALDYLHKSDWRRKELPADASYADFLTAIKSLAENEFMTDLHVE 185
Query: 111 ---------------HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
HPL+ + LQ KA+ + A LAP G VLD C+APG KTVH+
Sbjct: 186 GVLIFPAKWSNYWVRHPLVHSKRFILQNKATCLAAELLAPPSGATVLDMCAAPGMKTVHI 245
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
+M+ KG I + E + R L + K +G ++ + GD LNL P+ + +V IL+
Sbjct: 246 CNVMQNKGCIYSVEQDHVRYNTLCEITKDAGCDIVKPILGDALNLTPE--RFPDVEYILV 303
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVV 274
DPSCSGSG + +P E +RL KL Q K L HA+ +FP V+R+
Sbjct: 304 DPSCSGSGM----------QNRMTVCDEPKEDKRLQKLQGLQIKILSHAMGAFPNVKRIA 353
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSF 299
Y TCS+ + ENE V++ L + SF
Sbjct: 354 YCTCSLWKEENEQVVQRCLQLNPSF 378
>gi|358054359|dbj|GAA99285.1| hypothetical protein E5Q_05980 [Mixia osmundae IAM 14324]
Length = 545
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 104/285 (36%), Positives = 145/285 (50%), Gaps = 37/285 (12%)
Query: 44 RNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL---GKQFV----------- 89
+ K + I+D + P + K R++R+N L+ V A+ L G Q V
Sbjct: 159 KGKSREIDD----ERDPVLGKTRWMRINLLRWTVAEALDWLAQNGWQLVEKSQNSLQPLQ 214
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL---APKPGWKVLDACS 146
+ D +P LL DL +G + Q KAS M A L + +PG V+DA +
Sbjct: 215 IHLDGEIPSLLAFSRALDLVSFAPYQDGRLIAQDKASCMPAHLLLTASQRPGL-VIDATA 273
Query: 147 APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-----IEVLHGDFLNLD 201
APGNKT LAA + I+A E ++ RV LK ++G + V++ DF+ +
Sbjct: 274 APGNKTTMLAAGLPPGVPIMAFERDRGRVETLKKMCNIAGCGKGSTQAVRVINHDFMKVR 333
Query: 202 PKD-PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKA 260
KD P + +L+DPSCSGSG A RLDHL SG P +RL LS FQ
Sbjct: 334 AKDLPLFEGNLFVLVDPSCSGSGIRA-RLDHL---SQSGQDDTP---DRLKALSGFQTAI 386
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
L HA+ P R+VYSTCSIH+ ENEDV+ VL P ++ G++L
Sbjct: 387 LSHAMRLPRASRIVYSTCSIHREENEDVVMRVLAKPEFVNQGWEL 431
>gi|346978820|gb|EGY22272.1| hypothetical protein VDAG_03710 [Verticillium dahliae VdLs.17]
Length = 585
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 107/349 (30%), Positives = 155/349 (44%), Gaps = 81/349 (23%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMA---LYQTPDVPKPRYVRVNTLKMDVDSAVLELGK 86
HK + + + +R K ++E L A L P+ PR+VR+N ++ D+++ + K
Sbjct: 102 HKARLTSEMTRARLRRKAPTLEALRADINLAADPEGRHPRWVRINAVRTDLETQLSTTFK 161
Query: 87 QFV-----------------VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
F + D+ VP+L+ + PG DL +G + LQ KAS
Sbjct: 162 DFTRVMSIADVAASTMASRSLYLDEHVPNLVAVSPGLDLTKTQAYRDGEIILQDKASCFP 221
Query: 130 AAALAPKP-GWKVLDACSAPGNKTVHLAALMKG--------KGKIVACELNKERVRRLKD 180
A L P+ V+D+C+APGNKT HLAA++K K I A E N +R L+
Sbjct: 222 AYLLDPRAEDGDVIDSCAAPGNKTTHLAAIIKAHAPAQGAAKQTIFAFERNDKRALTLEK 281
Query: 181 TIKLSGAANIEV--LHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE----RLDHL-- 232
+K +G+ + + DF +DPK Y+ V A+LLDPSCSGSG RL HL
Sbjct: 282 MVKTAGSHKMTRIGMGQDFTGVDPKAALYANVGALLLDPSCSGSGIVGRDSMPRL-HLPE 340
Query: 233 -----LPSHAS----------------------------------GHTADPTEMERLNK- 252
P+ S G+T + + L K
Sbjct: 341 GPAAAGPAKGSARPSPAAAAAAEGKKRKRQETDETQAKAVLVDDDGNTTELASEQDLQKR 400
Query: 253 ---LSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMS 298
LS FQ L HA+ FP R+ YSTCS+H ENE V+ L A++
Sbjct: 401 LDALSGFQLTLLLHAMKFPAARRITYSTCSVHAEENEHVVVKALQSAVA 449
>gi|449018708|dbj|BAM82110.1| probable tRNA/rRNA cytosine-C5-methylase NOL1 [Cyanidioschyzon
merolae strain 10D]
Length = 448
Score = 130 bits (327), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/242 (36%), Positives = 129/242 (53%), Gaps = 23/242 (9%)
Query: 77 VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV---HPLIVNGCVFLQGKASSMVAAAL 133
+D A +E V++D PDL G DL H + G + +Q + S + A AL
Sbjct: 154 LDPAAVERAFPGCVERDLAYPDLFWCFHG-DLGAFLSHEWVQRGLLIVQDRGSCLAALAL 212
Query: 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL 193
P+ GW ++DAC+APGNK++ LA L++ G + A E + ER R + ++ +G +
Sbjct: 213 QPQRGWHLIDACAAPGNKSMFLANLLQQSGMVYAFERDAERYRAMVSRVRSAGFTQSIRM 272
Query: 194 H-GDFLNL---DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMER 249
H DF + D D A ++ AIL+DPSCSGSG R + R
Sbjct: 273 HLKDFRTVVSDDAHDGALAQASAILVDPSCSGSGLVRYR-----------PVGERYNWSR 321
Query: 250 LNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQLATP 306
+ +L+A Q + LRHAL +FP V RVVYSTCS+ ENE V++++L P S ++L T
Sbjct: 322 IGRLAAVQIQLLRHALVAFPRVRRVVYSTCSVLIEENEKVVEALLADPFIAS-RWRLDTV 380
Query: 307 FP 308
FP
Sbjct: 381 FP 382
>gi|255718407|ref|XP_002555484.1| KLTH0G10362p [Lachancea thermotolerans]
gi|238936868|emb|CAR25047.1| KLTH0G10362p [Lachancea thermotolerans CBS 6340]
Length = 529
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 97/316 (30%), Positives = 157/316 (49%), Gaps = 44/316 (13%)
Query: 14 RHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTL 73
+HPL ++F++ +K + L +L ++ KV ++ L+ + D+ R+ R+N +
Sbjct: 153 KHPL------KEFVLKYKARLSSELVRLKIKLKVTDLQQLLKDDRN-DMTPVRWFRLNPI 205
Query: 74 KMDVDSAVL--ELGKQF-------------VVQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
+ S + EL K+F + D+ +P L + P + H L G
Sbjct: 206 RCGAKSEDILQELSKKFPTRVNSWTNIAPGCIYHDEYIPGLFGVHPADKITSHELYKTGK 265
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAA-LMKGKG----KIVACELNKE 173
V +Q +AS A L ++DAC+APGNKT H+AA + + + +I A E + E
Sbjct: 266 VIIQDRASCFPAHILNASSEDLIIDACAAPGNKTTHVAAHIFQDQAVESVRIHAFEKDPE 325
Query: 174 RVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL-DH 231
R + L+ I +G IEV GDF L K + +V +LDPSCSGSG ++ D
Sbjct: 326 RAKTLRTMINTAGCTKGIEVHVGDFTQL-AKPGKFPDVTGFILDPSCSGSGIFGRKMIDD 384
Query: 232 LLPSHASGHT--------------ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYST 277
S A G + +D RL KL++FQ + ++HA+SFP +++VYST
Sbjct: 385 RNKSKADGASPVEEEEKEEEREDISDKDLKNRLEKLASFQFEIVKHAMSFPSAKKLVYST 444
Query: 278 CSIHQVENEDVIKSVL 293
CS+H ENE ++ +L
Sbjct: 445 CSVHAEENERIVVDLL 460
>gi|195569733|ref|XP_002102863.1| GD20129 [Drosophila simulans]
gi|194198790|gb|EDX12366.1| GD20129 [Drosophila simulans]
Length = 534
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 80/218 (36%), Positives = 119/218 (54%), Gaps = 20/218 (9%)
Query: 90 VQKDDLVPDL-----LILPPGCDLHV--HPLIVNGCVFLQGKASSMVAAALAPKPGWKVL 142
+++D+ + DL LI PP + HPL+ LQ KA+ + A LAP G VL
Sbjct: 274 LEEDEFMTDLHVEGVLIFPPKWSNYWVRHPLVHGKRFILQNKATCLAAELLAPPTGATVL 333
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
D C+APG KT+H+ +M+ KG I A E + +R L D + +G A ++ + D L+L P
Sbjct: 334 DMCAAPGMKTMHICNVMQNKGCIYAVEQDYKRYNTLCDITEEAGCAIVKPIFSDALDLTP 393
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
+ +++V IL+DPSCSGSG + +P + RL KL Q K L
Sbjct: 394 E--RFADVEYILVDPSCSGSGM----------QNRMTVCDEPKDDRRLQKLQGLQIKILS 441
Query: 263 HAL-SFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
HA+ SFP V+R+ Y TCS+ + ENE V++ L + S+
Sbjct: 442 HAMSSFPNVKRIAYCTCSLWKEENEQVVQRCLQLNPSY 479
>gi|71756143|ref|XP_828986.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|70834372|gb|EAN79874.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|261334917|emb|CBH17911.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 566
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 105/323 (32%), Positives = 143/323 (44%), Gaps = 97/323 (30%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQK-------------------------------- 92
PRY RVNTLK+DVDS V L + ++
Sbjct: 177 PRYARVNTLKIDVDSLVERLRRASAKRERNNTENCTGNDHSRRDHRHRAAGIRVLPPFTL 236
Query: 93 DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL------------------- 133
D +VP LL+ PPG DLH HP + +G + LQ +AS + L
Sbjct: 237 DPVVPSLLVFPPGTDLHAHPAVRSGQLVLQDRASCLPVCVLLNAVEVITSFSASGEGEGD 296
Query: 134 --APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-I 190
+P V+DAC+APGNKT LAAL KI+A E + +R L+ ++ GAA+
Sbjct: 297 SKPAEPLEYVVDACAAPGNKTTQLAALGAPHVKIMAIERDDKRAELLRHRVQSLGAADYT 356
Query: 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD------HLLPSHASG-HTAD 243
V++ DFL + D +E ILLDPSCS SG R+D + SG +T D
Sbjct: 357 NVVNMDFLKMAQDDREVTE--GILLDPSCSASGVLT-RVDVALLRKQCVAVDGSGIYTND 413
Query: 244 --------------------------------PTEMERLNKLSAFQKKALRHAL-SFPGV 270
+ MER+ L+ Q+K L H+L SF
Sbjct: 414 VVRQETAEEGVSETAVGGEVGTITAEAQGVGFASNMERVMGLARLQRKLLAHSLLSFDNC 473
Query: 271 ERVVYSTCSIHQVENEDVIKSVL 293
VVYSTCS+H+ ENE+V++ VL
Sbjct: 474 RTVVYSTCSVHEAENEEVVRQVL 496
>gi|258567232|ref|XP_002584360.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905806|gb|EEP80207.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 547
Score = 129 bits (325), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/360 (30%), Positives = 153/360 (42%), Gaps = 81/360 (22%)
Query: 6 RIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQ------- 58
R G+ HPL + H+ + ++ VR S+E L + +
Sbjct: 83 RKGIAAPANHPL------RLAIERHRTRLNAEFTKIRVRRGCASVEQLRSTLRPTLRGPG 136
Query: 59 TPDVPKPRYVRVNTLKMDVD----------SAVLELG-------KQFVVQKDDLVPDLLI 101
VP PR+VR+N + ++ S V L K + V D +PDL+
Sbjct: 137 DNTVPNPRWVRINNARTTLEQELKTTFGAYSPVASLSGLAATGSKGYYV--DRHIPDLIA 194
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL-----APKPGWKVLDACSAPGNKTVHLA 156
+ L G + LQ KAS A L AP G ++D C+APGNKT HLA
Sbjct: 195 VVSTSQLLSTRAYKEGRIILQDKASCFPAYLLLGDKAAPWRG-DLIDGCAAPGNKTTHLA 253
Query: 157 ALMKGKGK----IVACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEV 210
+L+ G+ I + + + R + L+ + ++G N + VL G DFL LDP+DP + +V
Sbjct: 254 SLLFASGQTSSHIFSLDASPTRSKTLQKMVGIAGVKNRVTVLAGQDFLALDPRDPRFKKV 313
Query: 211 RAILLDPSCSGSGTA----------------------------AERLDHLLPSHASGHTA 242
+LLDPSCSGSG + D L +
Sbjct: 314 TGLLLDPSCSGSGIVRREDVPQLALPEPSSRTARGSGSNPRKRKRKADDSLSATGESSAT 373
Query: 243 DPTEME---------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
D E E RL KLS Q + + HA FP RV YSTCSIH ENE+V+ VL
Sbjct: 374 DNAENEPVNGELDIARLTKLSNLQAQIVEHAFKFPSATRVTYSTCSIHAQENENVVSRVL 433
>gi|212533769|ref|XP_002147041.1| NOL1/NOP2/sun domain protein, putative [Talaromyces marneffei ATCC
18224]
gi|210072405|gb|EEA26494.1| NOL1/NOP2/sun domain protein, putative [Talaromyces marneffei ATCC
18224]
Length = 545
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 149/333 (44%), Gaps = 70/333 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT-------PD----VPKPRYVRVNTLKMDVD 78
HK ++ L + VR SI DL + PD PR+VR+N +K ++
Sbjct: 103 HKVRLKAELTKARVRRNCASISDLQSAILAEKRALLGPDELMESMYPRWVRINNIKSTLN 162
Query: 79 SAVL-------------ELGKQFVVQKDDLVPDLLILPPGC-DLHVHPLIVNGCVFLQGK 124
+ + EL + D +PDL+ L PG D NG + LQ K
Sbjct: 163 TQMEAAFKDHKRVGRLNELKSANQIYVDAHIPDLVALAPGTVDFSSSNAYKNGEIILQDK 222
Query: 125 ASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKG-----------KGKIVACE 169
AS A L + W ++D C+APGNKT HLA+L+ K KI++ +
Sbjct: 223 ASCFPAYLLLGDKEDAWDGDLIDGCAAPGNKTTHLASLLAARQKLHGKKQTRKSKIISMD 282
Query: 170 LNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+ R + L+ + ++GA + VL G DFL LDP+D + V +LLDPSCSGSG
Sbjct: 283 ASAPRSKILQKMVSVAGADKLVTVLAGQDFLALDPEDERFELVTGLLLDPSCSGSGIIG- 341
Query: 228 RLD---HLLPSHASG------------------------HTADPTEMERLNKLSAFQKKA 260
R D +LP D + ERL KLS Q
Sbjct: 342 RDDVPKLVLPEQGKASKSSNRGTKRKRPTEDEAVKPDDTQKTDNVDAERLLKLSNLQTHI 401
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ HAL FP RV YSTCSIH +ENE V++ VL
Sbjct: 402 VEHALKFPAATRVTYSTCSIHILENECVVERVL 434
>gi|116207384|ref|XP_001229501.1| hypothetical protein CHGG_02985 [Chaetomium globosum CBS 148.51]
gi|88183582|gb|EAQ91050.1| hypothetical protein CHGG_02985 [Chaetomium globosum CBS 148.51]
Length = 330
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 81/223 (36%), Positives = 115/223 (51%), Gaps = 29/223 (13%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK-PRYVRVNTLKMDVDSAVLELGKQF 88
HK +Q + +R K +++ L A+ P PR++RVN+LK VD + K F
Sbjct: 104 HKARLQSEFTRARLRRKCPTVDALKAVIDAQSGPAHPRWIRVNSLKSTVDEQLDTTFKGF 163
Query: 89 ------------------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVA 130
V+ D VP+L+ PPG D P +G + LQ KAS A
Sbjct: 164 EVVPTVSEVMAPTSSNKKVLCLDSHVPNLIAAPPGIDFTKTPAYQSGAIILQDKASCFPA 223
Query: 131 AALAPKP-GWKVLDACSAPGNKTVHLAALMKGKG-------KIVACELNKERVRRLKDTI 182
L P+P ++DACSAPGNKT HLAA++ +G +I+A E +K R + L +
Sbjct: 224 YLLDPRPEDGDIVDACSAPGNKTTHLAAILHERGGLAAGQQRILAFEKDKNRAKTLAKMV 283
Query: 183 KLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+ +G+ + V+H DFL DP P + V A+LLDPSCSGSG
Sbjct: 284 RAAGSDKVTVIHPGADFLKTDPDAPEFRAVGALLLDPSCSGSG 326
>gi|71023973|ref|XP_762216.1| hypothetical protein UM06069.1 [Ustilago maydis 521]
gi|46101659|gb|EAK86892.1| hypothetical protein UM06069.1 [Ustilago maydis 521]
Length = 590
Score = 129 bits (323), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/327 (33%), Positives = 149/327 (45%), Gaps = 52/327 (15%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLM--ALYQTPDVPKPRYVRVNTLKMDVDSAVLEL 84
L ++ ++ AL +L +R I+DL ALY+ PR++R+N L+ D + L
Sbjct: 131 LERYRPSLHSALVKLQIRLGKSRIQDLRSGALYEQMTARIPRWIRINPLRATRDQVLQWL 190
Query: 85 GKQFVVQ---KDDLVPDLLILPPGCD----LHVHP----------LIVNGCVFLQGKASS 127
Q +DD + + L HP + + +Q AS
Sbjct: 191 SDNRYTQVDVRDDEIGGIKQFAESTHVAGLLAFHPKATSALLKSEMYRENWIVMQDLASC 250
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK-------GKIVACELNKERVRRLKD 180
A L P G V+DA SAPGNKT HL+A+M K G+I A E + R + L
Sbjct: 251 FPAYILDPPAGSSVIDATSAPGNKTSHLSAIMHSKSGSTRENGRIDAFERDAARYKTLVK 310
Query: 181 TIKLSGA-----------ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ GA N+ DFL +P D + V +LLDPSCSGSG RL
Sbjct: 311 RLDAVGALALPRPQPTQHGNVTAHRRDFLTTNPDD--FPNVTHMLLDPSCSGSGIV-NRL 367
Query: 230 DHLL--------PSHASGHTADPTE--MERLNKLSAFQKKALRHALSFPGVERVVYSTCS 279
D L P A +D T RL +LS FQ+ +RHA FP + +VVYSTCS
Sbjct: 368 DFLKEDDDVEHDPLDADALDSDTTTKLARRLRQLSEFQQLMIRHAFKFPALRKVVYSTCS 427
Query: 280 IHQVENEDVIKSVLPI--AMSFGFQLA 304
+H ENE V+ + L A S G++LA
Sbjct: 428 VHAQENELVVINALQTHEAQSRGWKLA 454
>gi|340522577|gb|EGR52810.1| predicted protein [Trichoderma reesei QM6a]
Length = 585
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 108/350 (30%), Positives = 150/350 (42%), Gaps = 78/350 (22%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK----PRYVRVNTLKMDVDSA----- 80
HKG + +R K +IE L + + PR+VRVN LK V+
Sbjct: 102 HKGRLSSEFTLARLRRKAPTIEALREQVERASAGEEANYPRWVRVNALKSSVEEQLETTF 161
Query: 81 ------------VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
V + G+ + D VP+LL + PG D +G + LQ KAS
Sbjct: 162 AKHTRADSIQDIVTKGGRHIYI--DPHVPNLLAVSPGMDFAKVEAYTSGKIILQDKASCF 219
Query: 129 VAAALAPKP-GWKVLDACSAPGNKTVHLAALM--------KGKGKIVACELNKERVRRLK 179
A L P+ V+DACSAPGNKT HLAA++ I A E + R + L+
Sbjct: 220 PAYLLDPRSEDGDVIDACSAPGNKTTHLAAILYQHRPEFEDAPQTIFAFEKDSRRAKTLE 279
Query: 180 DTIKLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSG-------------- 223
+ ++G+ I + DFL +DP Y +V A+LLDPSCSGSG
Sbjct: 280 KMVNIAGSKPITRIGFGQDFLQVDPLSEKYKDVGALLLDPSCSGSGIVGRDSMPELHLPD 339
Query: 224 -------------------------TAAERLDHLLPSHASGHTADPTEME---RLNKLSA 255
A E+ ++L T +E + RL LSA
Sbjct: 340 PPADNRGGKAKPNQANANKKKRRRDEAEEQAQNVLVDDDGNETVVKSEKDLEARLEALSA 399
Query: 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
FQ L HA FP +++ YSTCSIH ENE V+ L IA + G+++
Sbjct: 400 FQLTLLLHAFRFPRAKKITYSTCSIHSQENERVVIRALASDIAKAKGWRI 449
>gi|156843043|ref|XP_001644591.1| hypothetical protein Kpol_1003p38 [Vanderwaltozyma polyspora DSM
70294]
gi|156115237|gb|EDO16733.1| hypothetical protein Kpol_1003p38 [Vanderwaltozyma polyspora DSM
70294]
Length = 496
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/292 (31%), Positives = 141/292 (48%), Gaps = 49/292 (16%)
Query: 61 DVPKPRYVRVNTLKMDVDSAVL----ELGKQF-------------VVQKDDLVPDLLILP 103
D+ R++R+N ++ D + EL K+F + DD +P+L +
Sbjct: 149 DITPVRWIRINPIRAQYDKGLEPIMNELNKKFPTRVNHWSDIVPGTIYHDDYIPNLFGVH 208
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
+ H L G V +Q +AS A L P V+DAC+APGNKT H A+ + G
Sbjct: 209 TKDKITSHELYKTGKVIIQDRASCFPAHILNPGKNDIVIDACAAPGNKTTHTASYILGGP 268
Query: 164 K------IVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLD 216
K I A E + ER + L+ IK++G +N I+V GDF + + + V ++D
Sbjct: 269 KKDQTTQIYAFEKDPERAKILQHMIKVAGCSNTIQVNVGDFTKIATPE-KFRNVTGFIVD 327
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTAD----------PTEME------------RLNKLS 254
PSCSGSG + + + D P E E RL+KL+
Sbjct: 328 PSCSGSGIFGRKYVDSINKKKQESSGDNGNQDDEDAVPDEQEEEFDLKRDDLKTRLSKLA 387
Query: 255 AFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQLA 304
+FQ + ++HA+SFP +++VYSTCSIH ENE V+ +L +G+++A
Sbjct: 388 SFQFQVVKHAMSFPKAKKIVYSTCSIHAEENEGVVIDLLLDKKVQEWGWKVA 439
>gi|296803510|ref|XP_002842608.1| NOL1/NOP2/Sun domain family protein [Arthroderma otae CBS 113480]
gi|238838927|gb|EEQ28589.1| NOL1/NOP2/Sun domain family protein [Arthroderma otae CBS 113480]
Length = 538
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/325 (33%), Positives = 153/325 (47%), Gaps = 61/325 (18%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDL----MALYQTPDVPKPRYVRVN----TLKMDVDS-- 79
HK + L +L VR S E L + Q V PR++R+N TL +++S
Sbjct: 114 HKSRLNAELTRLRVRRGCASKEGLKKRLLQDQQAAQVFSPRWIRINNALTTLMQELESTF 173
Query: 80 -------AVLELGKQFVVQK---DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMV 129
++ EL +K D+ VPDLL + D+ G + LQ KAS
Sbjct: 174 ASYTAVDSLSELAAAAGQKKYCLDEHVPDLLAVDRDIDITSTLSYKEGRLILQDKASCFP 233
Query: 130 AAAL-APKPG-WK--VLDACSAPGNKTVHLAALMKG-----KGKIVACELNKERVRRLKD 180
A L PG W+ ++D C+APGNKT HLA+L+ + ++ + + + R + L++
Sbjct: 234 AYLLLGDHPGRWEGDLVDGCAAPGNKTTHLASLLSSSRVPQRSRVFSLDASPSRSKILQE 293
Query: 181 TIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSG-TAAERLDHL-LPSH 236
+K +G + VL G DFL LDP+D + +V +LLDPSCSGSG T E + L LP
Sbjct: 294 MVKKAGVGERVTVLPGQDFLALDPEDRRFRQVTGLLLDPSCSGSGITKREDVPQLILPKS 353
Query: 237 AS--GHTADPT--------------------------EMERLNKLSAFQKKALRHALSFP 268
S G T E RL KL+ Q + + HA FP
Sbjct: 354 KSELGSTRSSKGSKNRKRKRESPPAPSSAASPPDGADESARLAKLANLQSQIVEHAFGFP 413
Query: 269 GVERVVYSTCSIHQVENEDVIKSVL 293
RV YSTCSIHQ ENE V+ VL
Sbjct: 414 AATRVTYSTCSIHQEENEGVVARVL 438
>gi|154282293|ref|XP_001541942.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150410122|gb|EDN05510.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 556
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 110/351 (31%), Positives = 156/351 (44%), Gaps = 75/351 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK---------PRYVRVNTLKMDVDSA 80
HK I+ + V + SIE+L AL + PR+ R+N + +D
Sbjct: 101 HKSRIKAEFVKSRVHRQCASIEELEALVKRQKNASGREDSIFGPPRWARINNVITSLDEQ 160
Query: 81 ----------VLELGKQFVVQKDDL-----VPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
V L + D L +PDL+ + L G + LQ KA
Sbjct: 161 LKTTFSAYKLVHSLSELVATTPDSLYQDPHIPDLVAVSQDAQLASSAAYKKGMIILQDKA 220
Query: 126 SSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALM---------------KGKGKIV 166
S A L + WK +LDAC+APGNKT HLA+L+ + K I
Sbjct: 221 SCFPAYLLLGSDAAKWKGDLLDACAAPGNKTTHLASLLCSSSKSHFGDRIHSTQDKFTIF 280
Query: 167 ACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
+C+++ R R L+ + ++GA + VL G DFL L P D + +V ILLDPSCSG+G
Sbjct: 281 SCDVSPNRSRILQRMVAIAGAETMVSVLPGQDFLALSPDDKRFQDVTGILLDPSCSGTGI 340
Query: 225 AA--------------------ERLDHL---LPSHASGHTADP---TEME--RLNKLSAF 256
+R H LP+ ++P T+++ RL KLS
Sbjct: 341 VGRDDMPCLALPSLQDPHDRGMKRKRHAPTPLPTLGRPAASEPQNTTDIDPGRLTKLSNL 400
Query: 257 QKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQLAT 305
Q + + HA FP RV YSTCSIH ENE VI VL P+A G+++ +
Sbjct: 401 QTRIVEHAFKFPNATRVTYSTCSIHVQENEVVIARVLKSPVAQRRGWRIVS 451
>gi|396488949|ref|XP_003842983.1| hypothetical protein LEMA_P087430.1 [Leptosphaeria maculans JN3]
gi|312219561|emb|CBX99504.1| hypothetical protein LEMA_P087430.1 [Leptosphaeria maculans JN3]
Length = 1384
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/310 (32%), Positives = 137/310 (44%), Gaps = 70/310 (22%)
Query: 58 QTPDVPKPRYVRVNTLKM-----------------DVDSAVLELGKQFVVQKDDLVPDLL 100
+ P PR+VRVNT+K D++ + K + +D +P+LL
Sbjct: 159 EAPKSRHPRWVRVNTIKTTLQEQLSKTFAGYEKTNDLEKVLAAPRKTKIYYEDPNIPNLL 218
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALM 159
LP DL G + Q KAS A L P P V+DA +APGNKT HLAA++
Sbjct: 219 ALPAQIDLSRSVAYAKGQIIFQDKASCFPAYLLDPTPDDGDVIDATAAPGNKTTHLAAIV 278
Query: 160 KGKG------KIVACELNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVR 211
K + K++A E +K R L+ +KL+ ++ + G DF+ P+ Y+ V
Sbjct: 279 KSRSEPDQEQKVIAFERDKGRTSILQKMVKLATTDSVIKVKGSSDFITAKPESDEYASVG 338
Query: 212 AILLDPSCSGSGTAAERLDHL---LPSHASGHTA-------------------------- 242
AILLDPSCSG+G R D + LP G TA
Sbjct: 339 AILLDPSCSGTGIVG-RDDAIKMHLPEAQGGRTALPIPGKGRKRKRGDEESKAEHDTATL 397
Query: 243 -------DPTEM-------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDV 288
P E ERL LSAFQ L HA+ F ++ YSTCSIH ENE V
Sbjct: 398 RLDMDESTPEETMVVGKLSERLTALSAFQLHILTHAMRFANAHKITYSTCSIHFEENEGV 457
Query: 289 IKSVLPIAMS 298
+ L +++
Sbjct: 458 VLQALSTSVA 467
>gi|119174502|ref|XP_001239612.1| hypothetical protein CIMG_09233 [Coccidioides immitis RS]
gi|392869813|gb|EAS28340.2| NOL1/NOP2/sun domain-containing protein [Coccidioides immitis RS]
Length = 544
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 146/339 (43%), Gaps = 77/339 (22%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--------VPKPRYVRVN----TLKMDV 77
HK + ++ +R S+E L + +T +P PR+VR+N TL+ ++
Sbjct: 101 HKTRLNAEFTRIRIRRGCASVEQLRSAIETATNRDAGDKALPSPRWVRINNARTTLEQEL 160
Query: 78 DSAV-----------LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
++ L D +PDL+ + L P G + LQ KAS
Sbjct: 161 NTTFAGYTPVTSLHGLSTSTTRAYYADKHIPDLIAVASTSQLLSTPAYKQGKIILQDKAS 220
Query: 127 SMVAAAL----APKPGWKVLDACSAPGNKTVHLAALMKGKG----KIVACELNKERVRRL 178
A L A ++D C+APGNKT HLA+L+ G KI + + + R + L
Sbjct: 221 CFPAYLLLGDQAASWSGDLIDGCAAPGNKTTHLASLLSAAGRKGAKIYSLDASPTRSKIL 280
Query: 179 KDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE----RLDHL 232
+ + ++G + + VL G DFL LDP+DP + V +LLDPSCSGSG RLD
Sbjct: 281 QKMVGIAGVDDRVTVLAGQDFLALDPEDPRFKNVTGLLLDPSCSGSGIVKREDVPRLD-- 338
Query: 233 LPSHASGHT--------------------------------------ADPTEMERLNKLS 254
LP S ++ ++ RL KLS
Sbjct: 339 LPEPKSQNSRGFVNSGPNSRKRKRKPGPPEASTSESPAPDTFENEAVGGEVDISRLTKLS 398
Query: 255 AFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
Q + + HA FP R+ YSTCSIH ENE+V+ L
Sbjct: 399 NLQAQIIEHAFKFPCATRITYSTCSIHAQENENVVYRAL 437
>gi|453087541|gb|EMF15582.1| NOL1/NOP2/sun domain protein [Mycosphaerella populorum SO2202]
Length = 564
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/364 (28%), Positives = 159/364 (43%), Gaps = 90/364 (24%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLM----------ALYQTPDVPK--PRYVRVNTLKMDV 77
HK + L + +R S++DL + ++P PR++R+NTLK +
Sbjct: 102 HKARLSAELTKARIRRGFGSLDDLRKDVEGRAISHSSSDGSEIPTRHPRWIRINTLKTSL 161
Query: 78 DSAVLELGKQF--------------------VVQKDDLVPDLLILPPGCDLHVHPLIVNG 117
+ + E F +V D+ +PDL+ + + G
Sbjct: 162 EEELKEDTGAFSTFTQAKSLKEIIQAAPTSRLVYIDENIPDLVAIASPEEPTTFKAYRCG 221
Query: 118 CVFLQGKASSMVAAAL----APK-PGWKVLDACSAPGNKTVHLAALMK---GKGKIVACE 169
+ LQ KAS A L +P+ V+DAC+APGNKT H+AA+++ G G++ ACE
Sbjct: 222 KLILQEKASCFPAYLLDYHSSPEGEAGDVIDACAAPGNKTTHIAAIVRSHNGTGRVFACE 281
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGS----- 222
+ ER + L K++GA I + DF LDP ++ V+ ++LDPSCSGS
Sbjct: 282 RDPERSKTLSKMTKIAGADEIVTIKAKQDFTRLDPTKKEFANVKGLILDPSCSGSGIFGR 341
Query: 223 --GTAAERLDHL------LPSHASGHTAD----------PTEME---------------- 248
GT RL L LP P E+E
Sbjct: 342 DEGTIVVRLPSLTAIEENLPKGKKRKRGGKNDKPQEQKPPAELETQAAAVEEEIPDDENQ 401
Query: 249 -------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSF 299
RL L+ FQ ++HA++FP ER+ YSTCS+H ENE+V+ L IA
Sbjct: 402 DDEKLQKRLENLAGFQLSIIKHAMAFPSAERITYSTCSLHGQENEEVVVKALLSDIAKRR 461
Query: 300 GFQL 303
G+++
Sbjct: 462 GWRI 465
>gi|71664085|ref|XP_819027.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70884310|gb|EAN97176.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 529
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 104/309 (33%), Positives = 141/309 (45%), Gaps = 78/309 (25%)
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLEL------------GKQFVVQK--------------- 92
P++ PRY RVNTLK+DV + V L G Q Q+
Sbjct: 165 PELQIPRYARVNTLKIDVVTLVERLHRAAEKRGREDDGSQGKEQQRKEKKTHHMKGFRLL 224
Query: 93 -----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL-------------A 134
D +VP LL+ P G DLH HP + +G + LQ +AS + A L A
Sbjct: 225 SAFTMDPVVPSLLVFPAGTDLHAHPAVRSGQLILQDRASCLPACILLDAVEVVRPSSAGA 284
Query: 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVL 193
P ++DAC+APGNKT HLAAL KI+A E +++R L ++ GA++ + V+
Sbjct: 285 GAPLEYIVDACAAPGNKTTHLAALGAPHVKIMAVERDEKRADLLFRRVQSLGASDYVNVV 344
Query: 194 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE------- 246
+ DF + D +E ILLDPSCS SG R+D L A+ E
Sbjct: 345 NLDFFQMSSADREATE--GILLDPSCSASGVLT-RVDVSLMRQRQARVAEVGENNRGEDG 401
Query: 247 ---------------------MERLNKLSAFQKKALRHA-LSFPGVERVVYSTCSIHQVE 284
+R+ L+ Q+K L HA LSF VVYSTCS+H E
Sbjct: 402 AGNNETWAISPEEHGTEFASNADRVMGLARLQRKLLAHALLSFDNCRTVVYSTCSVHVEE 461
Query: 285 NEDVIKSVL 293
NE V++ VL
Sbjct: 462 NELVVRQVL 470
>gi|195143743|ref|XP_002012857.1| GL23704 [Drosophila persimilis]
gi|194101800|gb|EDW23843.1| GL23704 [Drosophila persimilis]
Length = 433
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 133/265 (50%), Gaps = 40/265 (15%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ--------------------FVVQKDDLVPDL--- 99
P PRYVRVNT + + A+ L + +++D+ + DL
Sbjct: 126 PNPRYVRVNTNLLSIAEALEYLSSEEWRRKELPAEATYADFLTAIRAMEEDEFMTDLHVE 185
Query: 100 --LILPPGCDLHV--HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
LI P + H + + LQ KA+S+ A LAP G VLD C+APG KT+H+
Sbjct: 186 GVLIFHPKWAHYWAGHDFVHSKKFILQNKATSLAAELLAPPVGSTVLDLCAAPGMKTLHM 245
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
+M+ KG+I A E ++ER R L D +G + + GD L +D +V IL+
Sbjct: 246 CNVMQNKGRIYAVEQSQERYRALCDITNEAGCEIVTPILGDALTMDA--TRCPDVEYILV 303
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVV 274
DPSCSG+G + S S + + +RL KL+ Q K L HA+S FP V+R+
Sbjct: 304 DPSCSGNG---------MQSRISV-CDEQKDDKRLYKLAGLQIKILSHAMSAFPNVKRIA 353
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSF 299
Y TCS+ + ENE V++ L + SF
Sbjct: 354 YCTCSLWKEENEQVVQRCLQLNPSF 378
>gi|342883700|gb|EGU84150.1| hypothetical protein FOXB_05327 [Fusarium oxysporum Fo5176]
Length = 603
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 105/346 (30%), Positives = 147/346 (42%), Gaps = 74/346 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT----PDVPKPRYVRVNTLK----------- 74
HKG I +R K+ ++E L + + PR+VRVN +K
Sbjct: 102 HKGRISSEFKLARLRRKMPTLEALREQVERQCAGEEANYPRWVRVNAVKSTLEEQLETTF 161
Query: 75 ------MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
+ V G+ + D VP+LL + G DL G + LQ KAS
Sbjct: 162 SKYTRATSIKEVVTNTGRLIYI--DPHVPNLLAITAGIDLTKTEAYTTGKIILQDKASCF 219
Query: 129 VAAALAPK-PGWKVLDACSAPGNKTVHLAALMKG--------KGKIVACELNKERVRRLK 179
A L P+ ++DACSAPGNKT HLAA++K + I A E + R + L+
Sbjct: 220 PAYLLDPRAEDGDLIDACSAPGNKTTHLAAILKEHMPESNAPEQTIYAFEKDSRRAQTLE 279
Query: 180 DTIKLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL-------- 229
+K++G+ + + DFL +DP Y V A+LLDPSCSGSG
Sbjct: 280 KMVKIAGSKPVTKIGFGQDFLQVDPMAEKYKSVGALLLDPSCSGSGIVGRDSMPDLHLPE 339
Query: 230 ---------------------------DHLLPSHASGHTADPTEME---RLNKLSAFQKK 259
D ++ TA +E + RL LS+FQ
Sbjct: 340 GISSTGKGPAAKQNGRKRKHEQTETPEDRIMIDDDGNETAIKSEKDLETRLEALSSFQLT 399
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
L HA FP +R+ YSTCSIH ENE V+ L IA G+++
Sbjct: 400 LLLHAFKFPSAKRITYSTCSIHIQENERVVTKALESDIAKQRGWRI 445
>gi|452819690|gb|EME26744.1| tRNA/rRNA cytosine-C5-methylase NOL1-like protein [Galdieria
sulphuraria]
Length = 482
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 86/229 (37%), Positives = 116/229 (50%), Gaps = 24/229 (10%)
Query: 93 DDLVPDLLILPPGCDLHVHPLI-VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNK 151
D V LL+ P + H L+ + + +Q KAS +VA + GWKV+DAC++PGNK
Sbjct: 198 DSDVSSLLVFPCHSRIAEHHLVRLRRELVIQDKASCLVAQGFDAQLGWKVVDACASPGNK 257
Query: 152 TVHL---------AALMKGKGKIVACELNKERVRRLKDTIKLSG-AANIEVLHGDFLNLD 201
++HL A K++A + +K+R L TI+ G + I+ DFL +
Sbjct: 258 SMHLISKGIEQHGEAFYHNPIKVIAIDRDKKRFELLNRTIRNCGYESYIDTQKVDFLEWN 317
Query: 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
K E + I+LDPSCSGSG + G T RL +LS FQKK L
Sbjct: 318 DK-----ECQGIILDPSCSGSGLIKR-------NWTDGLDEKGTRPTRLKQLSFFQKKML 365
Query: 262 RHAL-SFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
RHAL FP RV YSTCSI++ ENE VI VL G++L P
Sbjct: 366 RHALCDFPKCCRVTYSTCSIYKEENEMVIYEVLQQVKDLGWKLTRFLPQ 414
>gi|198450934|ref|XP_001358184.2| GA18969 [Drosophila pseudoobscura pseudoobscura]
gi|198131259|gb|EAL27321.2| GA18969 [Drosophila pseudoobscura pseudoobscura]
Length = 433
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 91/265 (34%), Positives = 133/265 (50%), Gaps = 40/265 (15%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ--------------------FVVQKDDLVPDL--- 99
P PRYVRVNT + + A+ L + +++D+ + DL
Sbjct: 126 PNPRYVRVNTNLLSIAEALEYLSSEEWRRKELPAEATYADFLTAIRAMEEDEFMTDLHVE 185
Query: 100 --LILPPGCDLHV--HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
LI P + H + + LQ KA+S+ A LAP G VLD C+APG KT+H+
Sbjct: 186 GVLIFHPKWAHYWAGHDFVHSKKFILQNKATSLAAELLAPPVGSTVLDLCAAPGMKTLHM 245
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
+M+ KG+I A E ++ER R L D +G + + GD L +D +V IL+
Sbjct: 246 CNVMQNKGRIYAVEQSQERYRALCDITNEAGCEIVTPILGDALTMDA--TRCPDVEYILV 303
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVV 274
DPSCSG+G + S S + + +RL KL+ Q K L HA+S FP V+R+
Sbjct: 304 DPSCSGNG---------MQSRISV-CDEQKDDKRLYKLAGLQIKILSHAMSAFPNVKRIA 353
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSF 299
Y TCS+ + ENE V++ L + SF
Sbjct: 354 YCTCSLWKEENEQVVQRCLQLNPSF 378
>gi|303314363|ref|XP_003067190.1| NOL1/NOP2/sun family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240106858|gb|EER25045.1| NOL1/NOP2/sun family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 540
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 146/339 (43%), Gaps = 77/339 (22%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--------VPKPRYVRVN----TLKMDV 77
HK + ++ +R S+E L + +T +P PR+VR+N TL+ ++
Sbjct: 100 HKTRLNAEFTRIRIRRGCASVEQLRSAIETATNRDAGDKALPSPRWVRINNARTTLEQEL 159
Query: 78 DSAV-----------LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
++ L D +PDL+ + L P G + LQ KAS
Sbjct: 160 NATFAGYTPVTSLHGLSTSTTRAYYADKHIPDLIAVASTSQLLSTPAYKQGKIILQDKAS 219
Query: 127 SMVAAAL----APKPGWKVLDACSAPGNKTVHLAALMKGKG----KIVACELNKERVRRL 178
A L A ++D C+APGNKT HLA+L+ G KI + + + R + L
Sbjct: 220 CFPAYLLLGDQAASWSGDLIDGCAAPGNKTTHLASLLSAAGRKGAKIYSLDASPTRSKIL 279
Query: 179 KDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE----RLDHL 232
+ + ++G + + VL G DFL LDP+DP + V +LLDPSCSGSG RLD
Sbjct: 280 QKMVGIAGVDDRVTVLAGQDFLALDPEDPRFKNVTGLLLDPSCSGSGIVKREDVPRLD-- 337
Query: 233 LPSHASGHT--------------------------------------ADPTEMERLNKLS 254
LP S ++ ++ RL KLS
Sbjct: 338 LPEPKSQNSRRFVNSGPNSRKRKRKPGPPEASTSESPAPDTFENEAVGGEVDISRLTKLS 397
Query: 255 AFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
Q + + HA FP R+ YSTCSIH ENE+V+ L
Sbjct: 398 NLQAQIIEHAFKFPCATRITYSTCSIHAQENENVVYRAL 436
>gi|320037469|gb|EFW19406.1| hypothetical protein CPSG_03790 [Coccidioides posadasii str.
Silveira]
Length = 540
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 100/339 (29%), Positives = 146/339 (43%), Gaps = 77/339 (22%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPD--------VPKPRYVRVN----TLKMDV 77
HK + ++ +R S+E L + +T +P PR+VR+N TL+ ++
Sbjct: 100 HKTRLNAEFTRIRIRRGCASVEQLRSAIETATNRDAGDKALPSPRWVRINNARTTLEQEL 159
Query: 78 DSAV-----------LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
++ L D +PDL+ + L P G + LQ KAS
Sbjct: 160 NATFAGYTPVTSLHGLSTSTTRAYYADKHIPDLIAVASTSQLLSTPAYKQGKIILQDKAS 219
Query: 127 SMVAAAL----APKPGWKVLDACSAPGNKTVHLAALMKGKG----KIVACELNKERVRRL 178
A L A ++D C+APGNKT HLA+L+ G KI + + + R + L
Sbjct: 220 CFPAYLLLGDQAASWSGDLIDGCAAPGNKTTHLASLLSAAGRKGAKIYSLDASPTRSKIL 279
Query: 179 KDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE----RLDHL 232
+ + ++G + + VL G DFL LDP+DP + V +LLDPSCSGSG RLD
Sbjct: 280 QKMVGIAGVDDRVTVLAGQDFLALDPEDPRFKNVTGLLLDPSCSGSGIVKREDVPRLD-- 337
Query: 233 LPSHASGHT--------------------------------------ADPTEMERLNKLS 254
LP S ++ ++ RL KLS
Sbjct: 338 LPEPKSQNSRRFVNSGPNSRKRKRKPGPPEASTSESPAPDTFENEAVGGEVDISRLTKLS 397
Query: 255 AFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
Q + + HA FP R+ YSTCSIH ENE+V+ L
Sbjct: 398 NLQAQIIEHAFKFPCATRITYSTCSIHAQENENVVYRAL 436
>gi|294898664|ref|XP_002776327.1| williams-beuren syndrome critical region protein, putative
[Perkinsus marinus ATCC 50983]
gi|239883237|gb|EER08143.1| williams-beuren syndrome critical region protein, putative
[Perkinsus marinus ATCC 50983]
Length = 444
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 99/280 (35%), Positives = 149/280 (53%), Gaps = 50/280 (17%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQKDD-LVPDLLILPPGCD--LHVHPLIVNGCVFL 121
PRYVRVN ++ ++A+ +LG + K D L+PD++ + P L PL+ + + L
Sbjct: 123 PRYVRVNLAEISRENAIEQLGSAGIKSKADPLIPDVITVDPWNSKALIESPLVRDFTLVL 182
Query: 122 QGKASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKGK---GKIVACELNKER 174
Q + S + A +L +PG K V+DAC++PG+KT+H+ LM+ + G +VA EL+ +R
Sbjct: 183 QDRGSCLSAHSLLAGVQPGEKITVVDACASPGSKTIHMLQLMRYRKIEGTMVAMELDPKR 242
Query: 175 VRRLKDTIKLSG-----------------AA-----NIEVLHGDFLNLDPKDPAYSEVRA 212
+ L D + +G AA ++EV GDF+ + EV
Sbjct: 243 AKVLLDRLAKAGFLPRDGTRTSEEVAHLSAAHSPDISVEVRVGDFIKY-----SSPEVTH 297
Query: 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVE 271
+ LDPSCSGSG L+ HA ++ +RL KLS+FQ + L HAL+ FP V+
Sbjct: 298 VNLDPSCSGSG--------LVDVHAD---SESVGAQRLRKLSSFQCRMLDHALTAFPAVQ 346
Query: 272 RVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGT 311
V YSTCSI EN +V+K L S G++ PF G+
Sbjct: 347 TVCYSTCSIKNEENGEVVKKALNRLQS-GYRREWPFEVGS 385
>gi|67516687|ref|XP_658229.1| hypothetical protein AN0625.2 [Aspergillus nidulans FGSC A4]
gi|40746012|gb|EAA65168.1| hypothetical protein AN0625.2 [Aspergillus nidulans FGSC A4]
gi|259489109|tpe|CBF89108.1| TPA: NOL1/NOP2/sun domain protein, putative (AFU_orthologue;
AFUA_1G17090) [Aspergillus nidulans FGSC A4]
Length = 578
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 101/321 (31%), Positives = 151/321 (47%), Gaps = 83/321 (25%)
Query: 65 PRYVRVNTLKMDVDSAV---------LELGKQFVVQKDDL---------VPDLLILPPGC 106
PR+VRVN ++ +++ + +E VV DD +PDL+ + PG
Sbjct: 157 PRWVRVNNVRTTMEAQLKTTFAAFENVESLDGLVVGGDDKQKRMRLDPHIPDLVAVAPGV 216
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK----VLDACSAPGNKTVHLAALMKGK 162
+ P NG + LQ KAS A L W ++D C+APGNKT H+A+L++
Sbjct: 217 EFSSTPAYKNGEIILQDKASCFPAYLLLGD-DWDGQGDLVDGCAAPGNKTTHMASLLRKA 275
Query: 163 G--------KIVACELNKERVRRLKDTIKLSGAANI-EVLHG-DFLNLDPKDPAYSEVRA 212
+I++ + + R + LK + ++GA + VL G DFL LDP+DP + +V
Sbjct: 276 KSKKKAESSRIISMDASSIRAKTLKKMVSIAGADSFTSVLQGQDFLALDPQDPRFKDVTG 335
Query: 213 ILLDPSCSGSG-TAAERLDHLL------PSHASG-------------------------- 239
+LLDPSCSGSG + + L+ P+ ASG
Sbjct: 336 LLLDPSCSGSGIIGRDDVPQLVLPAPGRPTPASGSKNQTQGKKRKRNDSSGSSSNQPSTP 395
Query: 240 ----HTADPTEME-----------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
A P+ E RL KLS Q + + HAL+FP +V YSTCSIH +E
Sbjct: 396 SSLTSAATPSTSENDTPISEITQDRLLKLSNLQFRIVTHALAFPAARKVTYSTCSIHLLE 455
Query: 285 NEDVIKSVLP--IAMSFGFQL 303
NE V++ +L IA G+++
Sbjct: 456 NEAVVQRILESDIAKRRGWRV 476
>gi|407853204|gb|EKG06286.1| hypothetical protein TCSYLVIO_002612 [Trypanosoma cruzi]
Length = 529
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 103/309 (33%), Positives = 141/309 (45%), Gaps = 78/309 (25%)
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLEL------------GKQFVVQK--------------- 92
P++ PRY RVNTLK++V + V L G Q Q+
Sbjct: 165 PELQIPRYARVNTLKIEVVTLVERLHRAAEKRGREDDGSQGKEQQRKEKKTHHMKGFRVL 224
Query: 93 -----DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL-------------A 134
D +VP LL+ P G DLH HP + +G + LQ +AS + A L A
Sbjct: 225 SAFTMDPVVPSLLVFPAGTDLHAHPAVRSGQLILQDRASCLPACILLDAVEVVRPSSVGA 284
Query: 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVL 193
P ++DAC+APGNKT HLAAL KI+A E +++R L ++ GA++ + V+
Sbjct: 285 GAPLEYIVDACAAPGNKTTHLAALGAPHVKIMAVERDEKRADLLFRRVQSLGASDYVNVV 344
Query: 194 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE------- 246
+ DF + D +E ILLDPSCS SG R+D L A+ E
Sbjct: 345 NLDFFQMSSADREATE--GILLDPSCSASGVLT-RVDVSLMRQRQARVAEDGEKNRGEDG 401
Query: 247 ---------------------MERLNKLSAFQKKALRHA-LSFPGVERVVYSTCSIHQVE 284
+R+ L+ Q+K L HA LSF VVYSTCS+H E
Sbjct: 402 AGNNETWAISPEEHGTEFARNADRVMGLARLQRKLLAHALLSFDNCRTVVYSTCSVHVEE 461
Query: 285 NEDVIKSVL 293
NE V++ VL
Sbjct: 462 NELVVRQVL 470
>gi|330920953|ref|XP_003299218.1| hypothetical protein PTT_10168 [Pyrenophora teres f. teres 0-1]
gi|311327176|gb|EFQ92672.1| hypothetical protein PTT_10168 [Pyrenophora teres f. teres 0-1]
Length = 555
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 111/357 (31%), Positives = 154/357 (43%), Gaps = 81/357 (22%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALY-------QTPDVPK---PRYVRVNTLKMD 76
+ HK + L + +R +++ A + D PK PR+VRVNT+K
Sbjct: 86 ITRHKARLSAELTKARIRYGYATVDAFRAAVNDGELEKEEGDAPKSKHPRWVRVNTIKTT 145
Query: 77 VDSAVLELGKQFV-----------------VQKDDLVPDLLILPPGCDLHVHPLIVNGCV 119
++ + + FV +D +P+LL LP DL G +
Sbjct: 146 LEEQLSKTFAGFVKTENLADVLSAPKKSKIYYQDPNIPNLLALPSRIDLSRSFAYTKGQI 205
Query: 120 FLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALMKGKG------KIVACELNK 172
Q KAS A L PKP V+DA +APGNKT HLAA++ + K++A E +K
Sbjct: 206 IFQDKASCFPAYLLDPKPDDGDVIDATAAPGNKTTHLAAIVSDRKQPGEEQKVIAFERDK 265
Query: 173 ERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
R L+ +KL+ A I + G DF+ P +S V AILLDPSCSG+G R D
Sbjct: 266 GRTFTLQKMVKLASADGIVQVKGSSDFIAAKPGSDEFSNVAAILLDPSCSGTGIVG-RDD 324
Query: 231 HL---LPS----------------HASGHTAD----------------PTEM-------E 248
+ LP+ G AD P E E
Sbjct: 325 AIKMHLPAGPGEPTAVPKPDKGKKRKRGEEADNDKAPSTLDLDMDDSTPEETPMHGKLAE 384
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
RL LS+FQ L HA+ F ++ YSTCSIH ENE V+ L IA G+++
Sbjct: 385 RLAALSSFQLHILTHAMRFESAHKITYSTCSIHFEENEGVVFKALASSIAKERGWKI 441
>gi|195388816|ref|XP_002053074.1| GJ23680 [Drosophila virilis]
gi|194151160|gb|EDW66594.1| GJ23680 [Drosophila virilis]
Length = 433
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 95/274 (34%), Positives = 140/274 (51%), Gaps = 43/274 (15%)
Query: 55 ALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQK---DDLVPDLLILPPG----- 105
A YQ + P PRYVR+NT + + A+ L G+++ ++ D D L+
Sbjct: 119 AEYQKKE-PNPRYVRINTNLLSIADALDYLYGEEWRRKQLAADATYADFLVAIRTLEEDE 177
Query: 106 --CDLHV----------------HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSA 147
D+HV H + + LQ KA+ + A LAP G VLD C+A
Sbjct: 178 FLMDIHVEGVLIFHSKWSHYWASHDYVRSKKFILQNKATCLAAELLAPPVGSTVLDMCAA 237
Query: 148 PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP-KDPA 206
PG KT+HL +M+ +G+I A E +KER + L D +G + + GD L +D K P
Sbjct: 238 PGMKTLHLCNVMQNQGRIYAVEQSKERYKALCDITNEAGCQIVTPILGDALTMDSTKCP- 296
Query: 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
+V +L+DPSCSG+G + S S + + +RL KL+ Q K L HA+S
Sbjct: 297 --DVEYVLVDPSCSGNG---------MQSRISV-CDEQKDDKRLYKLAGLQIKILSHAMS 344
Query: 267 -FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
FP V+R+VY TCS+ + ENE V++ L + SF
Sbjct: 345 AFPNVKRIVYCTCSLWKEENEQVVQRCLQLNPSF 378
>gi|225561290|gb|EEH09570.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 556
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/351 (32%), Positives = 150/351 (42%), Gaps = 79/351 (22%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPD----------VPKPRYVRVNTLKMDVDS 79
HK I+ + V + SIE+L AL + VP PR+ R+N + +D
Sbjct: 101 HKSRIKAEFVKSRVHRQCASIEELEALVKRQKNTSGREDSILVP-PRWARINNVITTLDE 159
Query: 80 A----------VLELGKQFVVQKDDL-----VPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
V L + D L +PDL+ + L G V LQ K
Sbjct: 160 QLKTTFSAYKLVHSLSELVATTPDSLYQDPHIPDLVAVSQDAQLTSSAAYKKGMVILQDK 219
Query: 125 ASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKGKGK---------------I 165
AS A L + WK +LDAC+APGNKT HLA+L+ K I
Sbjct: 220 ASCFPAYLLLGSDAAQWKGDLLDACAAPGNKTTHLASLLCSSSKSHFGDGIHSTQDKFTI 279
Query: 166 VACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+C+++ R R L+ + ++GA + VL G DFL L P D + +V +LLDPSCSG+G
Sbjct: 280 FSCDVSPNRSRILQRMVAIAGAETMVSVLPGQDFLALSPDDKRFQDVTGLLLDPSCSGTG 339
Query: 224 TAAERLDH---LLPSHASGHT----------------ADPTEME----------RLNKLS 254
R D LPS H P E RL KLS
Sbjct: 340 IVG-RDDMPCLALPSFQDPHDRGMKRKRPAPSPVPTLGRPAASEHQNTTNIDPGRLTKLS 398
Query: 255 AFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
Q + + HA FP RV YSTCSIH ENE VI L P+A G+++
Sbjct: 399 NLQTRIVEHAFRFPNATRVTYSTCSIHAQENEVVIARALKSPVAQRRGWRI 449
>gi|240274384|gb|EER37900.1| NOL1/NOP2/sun domain-containing protein [Ajellomyces capsulatus
H143]
Length = 556
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 113/358 (31%), Positives = 152/358 (42%), Gaps = 93/358 (25%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPD----------VPKPRYVRVNTLKMDVDS 79
HK I+ + V + SIE+L AL + VP PR+ R+N + +D
Sbjct: 101 HKSRIKAEFVKSRVHRQCASIEELEALVKRQKNASGREDSILVP-PRWARINNVITTLDE 159
Query: 80 AVLELGKQFVVQK------------------DDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
+L F K D +PDL+ + L G + L
Sbjct: 160 ---QLKTTFSAYKLVHSLSELVATTPNSLYQDPHIPDLVAVSQDAQLTSSAAYKKGMIIL 216
Query: 122 QGKASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKGKGK------------- 164
Q KAS A L + WK +LDAC+APGNKT HLA+L+ K
Sbjct: 217 QDKASCFPAFLLLGSDAAQWKGDLLDACAAPGNKTTHLASLLCSSSKSHFGDGIHSTQDK 276
Query: 165 --IVACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCS 220
I +C+++ R R L+ + ++GA + VL G DFL L P D + +V ILLDPSCS
Sbjct: 277 FTIFSCDVSPNRSRILQRMVAIAGAETMVSVLPGQDFLALSPDDRRFQDVTGILLDPSCS 336
Query: 221 GSGTAAERLDHL----LPS-----------------------------HASGHTADPTEM 247
G+G D + LPS H + DP
Sbjct: 337 GTGIVGR--DDMPCLSLPSLQDPHDRGMKRKRPALTPVPTLGRPAASEHQNTTNIDPG-- 392
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
RL KLS Q + + HA FP RV YSTCSIH ENE VI VL P+A G+++
Sbjct: 393 -RLTKLSNLQTRIVEHAFRFPNATRVTYSTCSIHVQENEVVIARVLKSPVAQRRGWRI 449
>gi|195497866|ref|XP_002096282.1| GE25147 [Drosophila yakuba]
gi|194182383|gb|EDW95994.1| GE25147 [Drosophila yakuba]
Length = 532
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 74/191 (38%), Positives = 107/191 (56%), Gaps = 13/191 (6%)
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
H L+ + + LQ KA+S+ A LAP G VLD C+APG KT+HL +M+ KG I + E
Sbjct: 299 THELVHSKRLILQNKATSLAAELLAPPMGATVLDMCAAPGMKTLHLCNVMQNKGCIYSVE 358
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
++ R + L D + +G ++ + GD LNL +Y +V IL+DPSCSGSG +
Sbjct: 359 QDRVRYKTLCDITEQAGCEIVKPILGDALNL--TSDSYEDVEYILVDPSCSGSGMQSRM- 415
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDV 288
+P + RL KL Q K L HA+ SFP V+R+ Y TCS+ + ENE V
Sbjct: 416 ---------TVCDEPKDDSRLYKLQGLQIKILSHAMGSFPNVKRIAYCTCSLWKEENEQV 466
Query: 289 IKSVLPIAMSF 299
++ L + S+
Sbjct: 467 VERCLQLNPSY 477
>gi|325090728|gb|EGC44038.1| NOL1/NOP2/sun domain-containing protein [Ajellomyces capsulatus
H88]
Length = 556
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/350 (31%), Positives = 151/350 (43%), Gaps = 77/350 (22%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPD----------VPKPRYVRVNTLKMDVDS 79
HK I+ + V + SIE+L AL + VP PR+ R+N + +D
Sbjct: 101 HKSRIKAEFVKSRVHRQCASIEELEALVKRQKNASGREDSILVP-PRWARINNVITTLDE 159
Query: 80 AVLELGKQF---------------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+ + + +D +PDL+ + L G + LQ K
Sbjct: 160 QLKTTFSAYKLVHSLSELVATTPNSLYQDPHIPDLVAVSQDAQLTSSAAYKKGMIILQDK 219
Query: 125 ASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKGKGK---------------I 165
AS A L + WK +LDAC+APGNKT HLA+L+ K I
Sbjct: 220 ASCFPAFLLLGSDAAQWKGDLLDACAAPGNKTTHLASLLCSSSKSHFGDGIHSTQDKFTI 279
Query: 166 VACELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+C+++ R R L+ + ++GA + VL G DFL L P D + +V ILLDPSCSG+G
Sbjct: 280 FSCDVSPNRSRILQRMVAIAGAETMVSVLPGQDFLALSPDDRRFQDVTGILLDPSCSGTG 339
Query: 224 TAAE------RLDHLLPSHASGH-------TADPT---------------EMERLNKLSA 255
L L H G T PT + RL KLS
Sbjct: 340 IVGRDDVPCLSLPSLQDPHDRGMKRKRPALTPVPTLGRPAASEHQNTTNIDPGRLTKLSN 399
Query: 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
Q + + HA FP RV YSTCSIH ENE VI VL P+A G+++
Sbjct: 400 LQTRIVEHAFRFPNATRVTYSTCSIHVQENEVVIARVLKSPVAQRRGWRI 449
>gi|189208728|ref|XP_001940697.1| NOL1/NOP2/Sun domain family [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976790|gb|EDU43416.1| NOL1/NOP2/Sun domain family [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 551
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 110/361 (30%), Positives = 152/361 (42%), Gaps = 89/361 (24%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALY-------QTPDVPK---PRYVRVNTLKMD 76
+ HK + L + +R +I+ A + D PK PR+VRVNT+K
Sbjct: 82 ITRHKARLSAELTKARIRYGYATIDAFRAAVNDGELEKEEGDAPKSRHPRWVRVNTIKTT 141
Query: 77 VDSAVLELGKQF--------------------VVQKDDLVPDLLILPPGCDLHVHPLIVN 116
++ +L K F + +D +P+LL LP DL
Sbjct: 142 LEE---QLSKTFTGFIKTENLADVLSAPKRSKIYYQDPNIPNLLALPSRIDLSRTFAYTK 198
Query: 117 GCVFLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALMKGKG------KIVACE 169
G + Q KAS A L PKP V+DA +APGNKT HLAA++ + K++A E
Sbjct: 199 GQIIFQDKASCFPAYLLDPKPDDGDVIDATAAPGNKTTHLAAIVSDRKQPGEEQKVIAFE 258
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+K R L+ +KL+ A I + G DF+ P +S V AILLDPSCSG+G
Sbjct: 259 RDKGRTFTLQKMVKLASADGIVQVKGSSDFIAAKPGSDEFSNVGAILLDPSCSGTGIVGR 318
Query: 228 RLDHLLPSHASGHTADP--------------------------------------TEM-- 247
D + H A+P T M
Sbjct: 319 --DDAIKMHLPAGPAEPAVVPKADKGKKRKRGEEVAKDNAPSTLDLDMDDSTPEETPMHG 376
Query: 248 ---ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQ 302
ERL LS+FQ L HA+ F ++ YSTCSIH ENE V+ L IA G++
Sbjct: 377 KLAERLAALSSFQLHILTHAMRFESAHKITYSTCSIHFEENEGVVFKALASSIAKERGWK 436
Query: 303 L 303
+
Sbjct: 437 I 437
>gi|281202268|gb|EFA76473.1| NOL1/NOP2/Sun family protein [Polysphondylium pallidum PN500]
Length = 760
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 123/245 (50%), Gaps = 31/245 (12%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNT-------- 72
G A+K +M K + +LA+L +++KV + DL+ V PRYVRVNT
Sbjct: 95 GHAKKSVMAFKVQLSSSLARLKIKSKVSNNIDLLPDSIRNPVVLPRYVRVNTNVAQPTEV 154
Query: 73 ---------------------LKMDVDSAVLELGKQF-VVQKDDLVPDLLILPPGCDLHV 110
+ D S ++ G + +D+ ++LI DLH
Sbjct: 155 IAGFVKEGYQLKSYTGSELPTVTKDSSSNKVDFGDDNKIFYQDNDFKEILIFSGVVDLHD 214
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
H + +G + LQ KAS + A L P +D+CSAPGNKT ++A M GKI A E
Sbjct: 215 HQYLHSGKIILQDKASCLPAYILDPPKNVVCIDSCSAPGNKTSLVSAQMSNTGKIYAIEK 274
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+ +R+ L S NIE ++G FL+LD DP +S+V+ IL DPSCSGSG RLD
Sbjct: 275 DIKRMNTLIKLTNRSHCKNIEAVNGSFLDLDHDDPRFSDVQYILCDPSCSGSGI-VNRLD 333
Query: 231 HLLPS 235
+LL S
Sbjct: 334 YLLAS 338
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 38/49 (77%)
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
TE +RL L+ FQ +RHA +FP V+RVVYSTCSIHQVENEDV++ L
Sbjct: 457 TEAKRLELLADFQLSIIRHAFAFPCVKRVVYSTCSIHQVENEDVVQRAL 505
>gi|400602550|gb|EJP70152.1| NOL1/NOP2/sun family protein [Beauveria bassiana ARSEF 2860]
Length = 654
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 111/366 (30%), Positives = 155/366 (42%), Gaps = 95/366 (25%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK-------PRYVRVNTLKMDVD---- 78
HK + L + +R K ++E AL Q D PR+VR+NT+K V+
Sbjct: 102 HKARLTSELTRARLRRKAPTME---ALKQQIDRAAAGEEALIPRWVRINTIKTTVEEQLS 158
Query: 79 -----------------SAVLELG-KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
SA G KQ + D +P+L+ + G DL +G +
Sbjct: 159 TTFKGFQQVTTIDEVLASATTSTGAKQRRILIDQHIPNLVAVTQGVDLSKTEAYKSGKII 218
Query: 121 LQGKASSMVAAALAPKP-GWKVLDACSAPGNKTVHLAALMKGK---------GKIVACEL 170
Q KAS A L P P V+D C+APGNKT HLAA+ + KI A E
Sbjct: 219 FQDKASCFPAYLLDPLPEDGDVVDGCAAPGNKTTHLAAICYARRPDFVTPDPQKIFAFEK 278
Query: 171 NKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE- 227
+K R + L +K++G+ V G DF +DP +S+V A+LLDPSCSGSG
Sbjct: 279 DKRRSQTLTKMVKIAGSQGWTRVGFGQDFCQVDPTGQQFSKVGALLLDPSCSGSGIVGRD 338
Query: 228 -----RLDHLLPSHASGHTADPTEME---------------------------------- 248
+ P+ A+G D + +
Sbjct: 339 TMPELHIPRASPAAAAGKQMDKGKGKASDERGGENKKRKLDDKDAAQSSIMIDDEGNETV 398
Query: 249 ---------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAM 297
RL L+ FQ K L HAL+FP ++V YSTCSIH ENE V+ VL +A
Sbjct: 399 IDSEKDLEARLQALAGFQLKILLHALTFPAAKKVTYSTCSIHSQENEHVVMKVLESEVAQ 458
Query: 298 SFGFQL 303
G+++
Sbjct: 459 RRGWRI 464
>gi|194746675|ref|XP_001955802.1| GF18939 [Drosophila ananassae]
gi|190628839|gb|EDV44363.1| GF18939 [Drosophila ananassae]
Length = 433
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 91/266 (34%), Positives = 127/266 (47%), Gaps = 42/266 (15%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKD--------DLVPDLLILPPG---CDLHV- 110
P PRYVR+NT + A+ L + +K+ D + + L DLHV
Sbjct: 126 PNPRYVRINTNLFSLSEALEYLASEEWRRKELPADVSYADFLAAIKALEEDEFMTDLHVE 185
Query: 111 ---------------HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
H + LQ KA+ + A LAP PG VLD C+APG KT+HL
Sbjct: 186 GVLIFHHKWANYWATHDFVKEKKFILQNKATCLAAELLAPPPGSTVLDMCAAPGMKTLHL 245
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
+MK KG+I A E +KER L +G + + D L ++ D EV IL+
Sbjct: 246 CNVMKNKGRIYAVEQSKERYHSLCSITNDAGCEIVTPILDDALRMN--DERCPEVEYILV 303
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEME-RLNKLSAFQKKALRHAL-SFPGVERV 273
DPSCSG+G + + D + E RL KL+ Q K L HA+ +FP V+R+
Sbjct: 304 DPSCSGNGM-----------QSRINVCDEQKDERRLFKLAGLQVKILSHAMRAFPNVKRI 352
Query: 274 VYSTCSIHQVENEDVIKSVLPIAMSF 299
Y TCS+ + ENE V++ L + SF
Sbjct: 353 AYCTCSLWKEENEKVVQYCLQVNPSF 378
>gi|195037114|ref|XP_001990010.1| GH18476 [Drosophila grimshawi]
gi|193894206|gb|EDV93072.1| GH18476 [Drosophila grimshawi]
Length = 433
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 90/265 (33%), Positives = 135/265 (50%), Gaps = 40/265 (15%)
Query: 63 PKPRYVRVNTLKMDVDSAVLEL-GKQFVVQK---DDLVPDLLILPPG-------CDLHV- 110
P PRYVR+NT + ++ A+ L G+++ ++ D PD L D+HV
Sbjct: 126 PNPRYVRINTNLLSIEDALDYLYGEEWRRKQLPADATYPDFLNAIRALEEDEFLMDMHVE 185
Query: 111 ---------------HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
H + + LQ KA+ + A LAP G VLD C+APG KT+H+
Sbjct: 186 GVLIFHHKWSHYWASHDFVHSKKFILQNKATCLAAEMLAPPAGATVLDMCAAPGMKTLHM 245
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
+M+ KG+I A E +KER L + +G + + GD L ++ + +V IL+
Sbjct: 246 CNVMQNKGRIYAVEQSKERYMALCNITNEAGCQIVTPILGDALTMNAE--KCPDVEYILV 303
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVV 274
DPSCSG+G + S S + + +RL KL+ Q K L HA+S FP V+R+V
Sbjct: 304 DPSCSGNG---------MQSRISV-CDEQKDDKRLYKLAGLQIKILSHAMSAFPDVKRIV 353
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSF 299
Y TCS+ + ENE V++ L + SF
Sbjct: 354 YCTCSLWKEENEQVVQRCLQLNPSF 378
>gi|63093894|dbj|BAD98175.1| hypothetical protein [Drosophila parabipectinata]
Length = 433
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 87/265 (32%), Positives = 132/265 (49%), Gaps = 40/265 (15%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ---------------FV-----VQKDDLVPDLLIL 102
P PRYVR+NT + A+ L + F+ +++D+ + DL +
Sbjct: 126 PNPRYVRINTNLYSLSQALEYLASEDWRRKELPADASYADFLAAVKALEEDEFMTDLQVE 185
Query: 103 PPGCDLH-------VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
H H + LQ K + + A LAP G VLD C+APG KT+HL
Sbjct: 186 GVLVFHHKWSSYWSSHEFVKQKKFILQNKGTCLAAELLAPPSGSTVLDMCAAPGMKTLHL 245
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
MK KG+I A E + ER R L + +G + + GD L ++ ++ EV IL+
Sbjct: 246 CNFMKNKGRIYAVEQSTERYRVLCNITSEAGCDIVTPILGDALRMNAENCP--EVEYILV 303
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVV 274
DPSCSG+G + R++ + + +RL KL+ Q K L HA++ FP V+R+
Sbjct: 304 DPSCSGNGMQS-RMN---------VCDEEKDDQRLFKLAGLQVKILSHAMTAFPNVKRIA 353
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSF 299
Y TCS+++ ENE+V+K L + SF
Sbjct: 354 YCTCSLYKEENEEVVKRCLQVNPSF 378
>gi|294931333|ref|XP_002779838.1| williams-beuren syndrome critical region protein, putative
[Perkinsus marinus ATCC 50983]
gi|239889524|gb|EER11633.1| williams-beuren syndrome critical region protein, putative
[Perkinsus marinus ATCC 50983]
Length = 387
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 95/280 (33%), Positives = 143/280 (51%), Gaps = 50/280 (17%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQKDD-LVPDLLILPPGCD--LHVHPLIVNGCVFL 121
PRYVRVN ++ ++A+ +LG + K D L+PD++ + P L PL+ + + L
Sbjct: 49 PRYVRVNLAEISRENAIEQLGSAGIKSKTDPLIPDVITVGPWSSKALIESPLVRDFTLVL 108
Query: 122 QGKASSMVA----AALAPKPGWKVLDACSAPGNKTVHLAALMKGK---GKIVACELNKER 174
Q + S + A A + P V+DAC++PG+KT+H+ LM+ + G +VA EL+ +R
Sbjct: 109 QDRGSCLSAHSLLAGVLPGEKITVVDACASPGSKTIHMLQLMRYRKIEGTMVAMELDPKR 168
Query: 175 VRRLKDTIKLSG----------------------AANIEVLHGDFLNLDPKDPAYSEVRA 212
+ L D + +G ++EV GDF+ + EV
Sbjct: 169 AKVLLDRLAKAGFLPRDGTRTSEKVAHLSEAHGPDISVEVRVGDFIKY-----SSPEVTH 223
Query: 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVE 271
+ LDPSCSGSG L+ HA ++ +RL KLS+FQ + L HAL+ FP V
Sbjct: 224 VNLDPSCSGSG--------LVDVHAD---SESVGAQRLRKLSSFQCRMLDHALTAFPAVR 272
Query: 272 RVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGT 311
V YSTCSI EN +V+K L S G++ PF G+
Sbjct: 273 TVCYSTCSIKNEENGEVVKKALNRLQS-GYRREWPFEVGS 311
>gi|358398601|gb|EHK47952.1| hypothetical protein TRIATDRAFT_91484 [Trichoderma atroviride IMI
206040]
Length = 599
Score = 124 bits (311), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 107/351 (30%), Positives = 151/351 (43%), Gaps = 79/351 (22%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT----PDVPKPRYVRVNTLKMDVDSA----- 80
HKG + L +R K +I+ L + + PR+VRVN LK V+
Sbjct: 105 HKGRLSSELTLARLRRKAPTIDALREQVERAAAGEEANYPRWVRVNALKSSVEEQLETTF 164
Query: 81 ------------VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
V + G+ + D VP+LL + G + +G + LQ KAS
Sbjct: 165 SKHTRAESIQDIVTKSGRHIYI--DPHVPNLLAISAGMEFAKVEAYTSGKIILQDKASCF 222
Query: 129 VAAALAPKP-GWKVLDACSAPGNKTVHLAALM--------KGKGKIVACELNKERVRRLK 179
A L P+ V+DACSAPGNKT HLAA++ I A E + R + L+
Sbjct: 223 PAYLLDPRSEDGDVIDACSAPGNKTTHLAAIIHQHRPGFEDAPQTIYAFEKDSRRAQTLE 282
Query: 180 DTIKLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE------RLDH 231
+K++G+ ++ + DFL +DP Y +V A+LLDPSCSGSG L
Sbjct: 283 KMVKIAGSKDVTRIGFGQDFLQVDPMAENYKDVGALLLDPSCSGSGIVGRDSMPELHLPD 342
Query: 232 LLPSHASGHTADPT------------EME-------------------------RLNKLS 254
L G P+ E+E RL LS
Sbjct: 343 PLADGRGGGKGKPSAANANKKKRSHDEIEQGAQNVLVDDDGNETVVKSEKDLEARLEALS 402
Query: 255 AFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
AFQ L+HA FP +++ YSTCSIH ENE V+ L IA + G+++
Sbjct: 403 AFQLTLLQHAFRFPRAKKITYSTCSIHSQENERVVIRALASDIAKAKGWRI 453
>gi|296423439|ref|XP_002841261.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295637498|emb|CAZ85452.1| unnamed protein product [Tuber melanosporum]
Length = 710
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 93/290 (32%), Positives = 132/290 (45%), Gaps = 56/290 (19%)
Query: 65 PRYVRVNTLKMDVD-----------SAVLELGKQF--------VVQKDDLVPDLLILPPG 105
PR+VR+N L+ + D + V L + V D V DLL P
Sbjct: 134 PRWVRINNLRANYDLLMNKGVFSEFTPVDNLEDLYPNGGDLPNKVYVDPYVSDLLAFAPA 193
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM--KGKG 163
L HPL G + Q +AS + A L P V+DA +APGNKT HLA+L+ +G
Sbjct: 194 APLMKHPLKKTGAIVFQDRASCVPAQLLDPPRDAYVVDATAAPGNKTTHLASLLGPDSRG 253
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLH--GDFLNLDPKDP----AYSEVRAILLDP 217
KI A E + R LK+T++ +GA ++ + DFL P +P ++V ILLDP
Sbjct: 254 KIFAFERDYRRAFTLKETVEAAGAQDLVEIRPAQDFLRSAPWNPDEENGLNKVTHILLDP 313
Query: 218 SCSGSGTAAERLDHLLP--------------SHASGHTADPTEME--------------- 248
SC+GSG +P S G P+ +E
Sbjct: 314 SCTGSGIVERDEYKFVPPGEPRERGSKGLDGSFYKGLNTLPSAVEYDDSRVWRQRGTVED 373
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMS 298
R L+ FQ + + HA+ FP R+ YSTCSIH ENE V+ + L +++
Sbjct: 374 RTFSLADFQVRMIEHAMRFPSATRITYSTCSIHAQENERVVMAALNTSVA 423
>gi|206901447|ref|YP_002251151.1| ribosomal RNA small subunit methyltransferase B [Dictyoglomus
thermophilum H-6-12]
gi|206740550|gb|ACI19608.1| ribosomal RNA small subunit methyltransferase B [Dictyoglomus
thermophilum H-6-12]
Length = 430
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 87/227 (38%), Positives = 122/227 (53%), Gaps = 20/227 (8%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+RVNTLK+ V+ +L ++ + KD +LV L++ G D L NG +Q +AS
Sbjct: 173 IRVNTLKISVEDLKEKLKERGIKFKDGNLVTQALLIEDGFDFEKSDLFHNGYFVIQSEAS 232
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P+PG +V+D CSAPG K+ HLA LM KGKIV+ ++NK RV+ +++ K G
Sbjct: 233 MLPALILNPEPGSRVIDLCSAPGLKSTHLAELMNNKGKIVSVDINKNRVKLVEENAKRLG 292
Query: 187 AANIEVLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
+ IE L D LNL D + + V LLD CSG G + +
Sbjct: 293 ISIIETLAEDVLNLPDSLNGTFDRV---LLDAPCSGLGVISHK----------PEIKWRL 339
Query: 246 EMERLNKLSAFQKKALRHA---LSFPGVERVVYSTCSIHQVENEDVI 289
+ E + KLS Q K L A L G R+VYSTC+I ENE+V+
Sbjct: 340 KREDIYKLSEMQIKMLERAGKLLKKGG--RMVYSTCTITWHENENVV 384
>gi|367016593|ref|XP_003682795.1| hypothetical protein TDEL_0G02170 [Torulaspora delbrueckii]
gi|359750458|emb|CCE93584.1| hypothetical protein TDEL_0G02170 [Torulaspora delbrueckii]
Length = 484
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 89/270 (32%), Positives = 133/270 (49%), Gaps = 40/270 (14%)
Query: 61 DVPKPRYVRVNTL---KMDVDSAVLELGKQF-------------VVQKDDLVPDLLILPP 104
DV R++R+N L K DV+ + EL K+F + D+ VP+L + P
Sbjct: 149 DVTPVRWIRINPLRCPKNDVEPVLKELIKKFPQRVSHWSDITSGTLYYDEFVPNLFGVHP 208
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM----- 159
+ H L G + +Q ++S A L P V+DAC+APGNKT H+AA +
Sbjct: 209 RDKITSHELYRQGKIIIQDRSSCFPAHILNPGKNDVVIDACAAPGNKTTHVAAHILPEYT 268
Query: 160 -KGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPA-YSEVRAILLD 216
+ KI A E + R LK ++G +E+ GDF L PA + +V +++D
Sbjct: 269 REQTPKIYAFEKDPARANILKKMTSVAGCGQTVEIHVGDFTKLAV--PANFKDVTGLIVD 326
Query: 217 PSCSGSGTAAER-------------LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRH 263
PSCSGSG + D +P D RL+KL++FQ + ++H
Sbjct: 327 PSCSGSGIFGRKSVDSHNVAKKKTETDSEIPDEEEKMVGDDV-ANRLSKLASFQFQVVKH 385
Query: 264 ALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
A+S P +++VYSTCSIH ENE V+ +L
Sbjct: 386 AMSMPNAKKIVYSTCSIHAEENERVVIDLL 415
>gi|403340074|gb|EJY69306.1| NOP2/Sun domain family, member 5 [Oxytricha trifallax]
Length = 429
Score = 123 bits (308), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 104/176 (59%), Gaps = 15/176 (8%)
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
FLQGK + +DA S+PGNK++ L+ ++ GK+ + E++++R LK
Sbjct: 199 FLQGKYRE------GKIKDFHGIDATSSPGNKSLQLSEII---GKLYSLEMDQKRYETLK 249
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
++ A NIE L+ DFLN +P+ +Y +V I+ DPSCSGSG +L +
Sbjct: 250 RRVEQCQAKNIECLNYDFLNTNPE--SYEDVNVIICDPSCSGSGM---KLHAQQNQECTS 304
Query: 240 HTADPTEME-RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP 294
A P EM+ R LS FQ K + HAL+FP VE VVYSTCS+++ ENE+V++ +L
Sbjct: 305 GLATPDEMKTRAQNLSKFQFKIVSHALTFPSVEYVVYSTCSLYEEENENVVRDILK 360
>gi|302916869|ref|XP_003052245.1| hypothetical protein NECHADRAFT_2583 [Nectria haematococca mpVI
77-13-4]
gi|256733184|gb|EEU46532.1| hypothetical protein NECHADRAFT_2583 [Nectria haematococca mpVI
77-13-4]
Length = 480
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 99/333 (29%), Positives = 146/333 (43%), Gaps = 71/333 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK----PRYVRVNTLKM---------- 75
HK + +R K+ ++E L + + PR+VRVN +K
Sbjct: 85 HKARLNSEFKLARLRRKMPTLEALKEQIERQSAGEEANYPRWVRVNAVKSTLEDQLETTF 144
Query: 76 -------DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
+ V + GK + D VP+LL + PG DL +G + LQ KAS
Sbjct: 145 STYARASSIQEVVTKSGKFLYI--DPHVPNLLAITPGIDLTKTEAYASGKIILQDKASCF 202
Query: 129 VAAALAPKP-GWKVLDACSAPGNKTVHLAALMKG--------KGKIVACELNKERVRRLK 179
A L P+ ++DACSAPGNKT HLAA++K + I A E + R + L+
Sbjct: 203 PAYLLDPQSEDGDLIDACSAPGNKTTHLAAILKEHRPEFDAPEQTIYAFEKDPRRAQTLE 262
Query: 180 DTIKLSGAANI-EVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTAA----------- 226
+K +G+ + ++ G DFL ++P+ Y V A+LLDPSCSGSG
Sbjct: 263 KMVKTAGSRPMTQIGFGQDFLQVNPESDKYKSVGALLLDPSCSGSGIVGRDSMPELHLPD 322
Query: 227 -----------------------ERLDHLLPSHASGHTADPTEME---RLNKLSAFQKKA 260
E+ + ++ T +E + RL+ LS FQ
Sbjct: 323 SPANTGKGAAAKSNNRKRKHDQVEQPEKVIIDDDGNETVLASEKDLEARLDALSGFQLTL 382
Query: 261 LRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L+HA FP ++ YSTCS+H ENE V+ L
Sbjct: 383 LQHAFRFPSARKITYSTCSVHMQENERVVTRAL 415
>gi|195108007|ref|XP_001998584.1| GI24054 [Drosophila mojavensis]
gi|193915178|gb|EDW14045.1| GI24054 [Drosophila mojavensis]
Length = 433
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 94/275 (34%), Positives = 135/275 (49%), Gaps = 50/275 (18%)
Query: 58 QTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQ--------------FVVQKDDLVPDLLIL 102
Q P PRYVR+NT + V A+ L G++ F+ +L D ++
Sbjct: 121 QQKKEPNPRYVRINTNLLSVADALDYLYGEEWRRKQLDPDGTYADFLAAIRELEEDEFLM 180
Query: 103 PPGCDLHV----------------HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACS 146
D+HV H + LQ KA+ + A LAP G VLD C+
Sbjct: 181 ----DMHVEGVLIFHHKWSHYWASHEFVHAKKFILQNKATCLAAELLAPPVGSTVLDLCA 236
Query: 147 APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD-PKDP 205
APG KT+H+ +M KG+I A E +KER + L D +G + + GD L +D K P
Sbjct: 237 APGMKTLHICNVMHNKGRIYAVEQSKERYKALCDITNEAGCQIVTPILGDALTMDATKCP 296
Query: 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 265
+V IL+DPSCSG+G + S S + + +RL KL+ Q K L HA+
Sbjct: 297 ---DVEYILVDPSCSGNG---------MQSRISV-CDEQKDDKRLYKLAGLQIKILSHAM 343
Query: 266 S-FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
S FP V+R++Y TCS+ + ENE V++ L + SF
Sbjct: 344 SAFPNVKRILYCTCSLWKEENEQVVQRCLQLNPSF 378
>gi|358387015|gb|EHK24610.1| hypothetical protein TRIVIDRAFT_30279 [Trichoderma virens Gv29-8]
Length = 607
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 104/350 (29%), Positives = 148/350 (42%), Gaps = 78/350 (22%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK----PRYVRVNTLKMDVDSAVLEL- 84
HK + + +R K +++ L + + PR+VRVN LK V+ +
Sbjct: 102 HKARLSSEFTRARIRRKAATMDVLKEQVERTSAGEEANYPRWVRVNALKSSVEEQLETTF 161
Query: 85 ----------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
G+ + D VP+LL + G D +G + LQ KAS
Sbjct: 162 SKHTRAESIQDIMSKPGRHIYI--DPHVPNLLAISAGMDFAKVEAYTSGKIILQDKASCF 219
Query: 129 VAAALAPKP-GWKVLDACSAPGNKTVHLAALM--------KGKGKIVACELNKERVRRLK 179
A L P+ V+DACSAPGNKT HLAA++ I A E + R + L+
Sbjct: 220 PAYLLDPRSEDGDVIDACSAPGNKTTHLAAILYKHRPEFEDAPQTIYAFEKDSRRAQTLE 279
Query: 180 DTIKLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL---- 233
+K++G+ I + DFL +DP Y +V A+LLDPSCSGSG L
Sbjct: 280 KMVKIAGSKTITRIGFGQDFLQVDPTSEKYKDVGALLLDPSCSGSGIVGRDSMPELHLPD 339
Query: 234 -PSHASGHTADP------------TEME-------------------------RLNKLSA 255
P+ + G P E+E RL LSA
Sbjct: 340 PPTESRGGKGKPGAASTNKKKRKHEEVEEPAQNVLVDDDGNETVVKSEKDLEARLEALSA 399
Query: 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
FQ L HA FP +++ YSTCS+H ENE V+ L IA + G+++
Sbjct: 400 FQLTLLLHAFRFPRAKKITYSTCSVHSQENERVVIRALASDIAKAKGWRI 449
>gi|218190323|gb|EEC72750.1| hypothetical protein OsI_06380 [Oryza sativa Indica Group]
Length = 434
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 64/128 (50%), Positives = 79/128 (61%), Gaps = 33/128 (25%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
PKPR++RVNTL+ DS + EL K +H +
Sbjct: 110 PKPRFLRVNTLRTSTDSVIEELNK-----------------------IH----------K 136
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
GKAS MVA AL P+PGWKV+DAC+APGNKTVHLAALM G+G I ACELNKER + L++TI
Sbjct: 137 GKASCMVAVALCPEPGWKVIDACAAPGNKTVHLAALMNGEGSITACELNKERTKTLQNTI 196
Query: 183 KLSGAANI 190
+ SGA +I
Sbjct: 197 RRSGANSI 204
>gi|63093895|dbj|BAD98176.1| hypothetical protein [Drosophila parabipectinata]
Length = 421
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 72/190 (37%), Positives = 106/190 (55%), Gaps = 13/190 (6%)
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
H + LQ K + + A LAP G VLD C+APG KT+HL MK KG+I A E
Sbjct: 189 HEFVKQKKFILQNKGTCLAAELLAPPSGSTVLDMCAAPGMKTLHLCNFMKNKGRIYAVEQ 248
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+ ER R L + +G + + GD L ++ ++ EV IL+DPSCSG+G + R++
Sbjct: 249 STERYRVLCNITSEAGCDIVTPILGDALRMNAEN--CPEVEYILVDPSCSGNGMQS-RMN 305
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENEDVI 289
+ + +RL KL+ Q K L HA++ FP V+R+ Y TCS+++ ENE+V+
Sbjct: 306 ---------VCDEEKDDQRLFKLAGLQVKILSHAMTAFPNVKRIAYCTCSLYKEENEEVV 356
Query: 290 KSVLPIAMSF 299
K L + SF
Sbjct: 357 KRCLQVNPSF 366
>gi|346324514|gb|EGX94111.1| NOL1/NOP2/Sun domain family [Cordyceps militaris CM01]
Length = 677
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 104/352 (29%), Positives = 153/352 (43%), Gaps = 90/352 (25%)
Query: 30 HKGAIQLALAQLLVRNKVKSIE------DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLE 83
HK + L + +R K ++E D A + +P R+VR+N++K ++ +
Sbjct: 102 HKARLTSELTRARLRRKAPTMEALKEQVDRAAAGEEAQIP--RWVRINSIKTTIEDQLKT 159
Query: 84 LGKQF------------------VVQK----DDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
K + V Q+ D +P+L+ + G DL ++G +
Sbjct: 160 TFKGYDQVTTIQEVLAPSTTPTGVKQRRILIDPHIPNLVAITHGIDLSKTEAYLSGKIIF 219
Query: 122 QGKASSMVAAALAPKP-GWKVLDACSAPGNKTVHLAALMKGK---------GKIVACELN 171
Q KAS A L P P ++D C+APGNKT HLAA+ + KI A E +
Sbjct: 220 QDKASCFPAYLLDPLPEDGDIVDGCAAPGNKTTHLAAICHARRPDFETSDAQKIFAFEKD 279
Query: 172 KERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGT----- 224
K R + L +K++G+ V G DF +DP +++V A+LLDPSCSGSG
Sbjct: 280 KRRSQTLTKMVKIAGSQGWTRVGFGQDFCQVDPTGTQFAKVGALLLDPSCSGSGIVGRDT 339
Query: 225 -------------AAERLDHL-------------------LPSHASGHTADPTEME---- 248
A+ ++D + +H + D E
Sbjct: 340 MPELHVPEASPALASGKMDKAKGKATDGKEELSKKRKLDDIEAHQNSVMIDDEGNETVVD 399
Query: 249 -------RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL LS FQ K L HAL+FP ++V YSTCSIH ENEDV+ VL
Sbjct: 400 SEKDLEARLQALSGFQLKILLHALTFPAAKKVTYSTCSIHSQENEDVVMKVL 451
>gi|195452298|ref|XP_002073293.1| GK13235 [Drosophila willistoni]
gi|194169378|gb|EDW84279.1| GK13235 [Drosophila willistoni]
Length = 440
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 129/266 (48%), Gaps = 40/266 (15%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQK----DDLVPDLLILPPG-------CDLHV 110
V KPRYVR+NT + + A+ L + +K D PD L D++V
Sbjct: 132 VFKPRYVRINTNLLSIADALEYLASEQWRRKELPADASYPDFLAAIKSLEEDEFMTDINV 191
Query: 111 ------HP----------LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVH 154
HP + + LQ K + + A L P PG VLD C+APG KTVH
Sbjct: 192 ASVLIFHPKTAYYWASQDFVRSKKFILQSKGTCLAAELLDPPPGSTVLDMCAAPGMKTVH 251
Query: 155 LAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214
L +M+ KG+I A E + +R + L + +G + + GD L +D + +V IL
Sbjct: 252 LCNVMENKGRIYAVEQSGDRYKTLCNITDAAGCKIVTPILGDALTMDSN--SCPDVEYIL 309
Query: 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERV 273
+DPSCSG+G + + + +RL KL+ Q K L HA+ +FP V+R+
Sbjct: 310 VDPSCSGNGM----------QNRISVVDEQKDDDRLFKLAGLQAKILSHAMRAFPNVKRI 359
Query: 274 VYSTCSIHQVENEDVIKSVLPIAMSF 299
Y TCS+ Q ENE V++ L + SF
Sbjct: 360 AYCTCSLWQEENEKVVQFCLQVNPSF 385
>gi|367050298|ref|XP_003655528.1| hypothetical protein THITE_2054959 [Thielavia terrestris NRRL 8126]
gi|347002792|gb|AEO69192.1| hypothetical protein THITE_2054959 [Thielavia terrestris NRRL 8126]
Length = 642
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 112/222 (50%), Gaps = 28/222 (12%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVP-KPRYVRVNTLKMDVDSAVLELGKQF 88
HK +Q + +R K ++E L A+ P PR++RVN LK +D + K F
Sbjct: 102 HKARLQSEFTRARIRRKCPTLEALKAMVDAQLGPVHPRWIRVNALKSTIDEQLDTTFKGF 161
Query: 89 ------------------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVA 130
V+ D VP+L+ PG D G + LQ KAS A
Sbjct: 162 EMVPSVEEVIASASTGKRVICLDGHVPNLIAASPGIDFTKTEAYKEGKIILQDKASCFPA 221
Query: 131 AALAPKP-GWKVLDACSAPGNKTVHLAALMKGKG------KIVACELNKERVRRLKDTIK 183
L P+P ++DACSAPGNKT HLA ++ +G +I+A E +++R + L + +K
Sbjct: 222 YLLDPRPEDGDIIDACSAPGNKTTHLAGILYERGGFADGQRILAFEKDEQRAKTLANMLK 281
Query: 184 LSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+G+ + V+H DFL DP P + V A+LLDPSCSGSG
Sbjct: 282 AAGSDAVTVVHAGRDFLKTDPHAPEFRRVGALLLDPSCSGSG 323
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/57 (50%), Positives = 39/57 (68%), Gaps = 2/57 (3%)
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
RL L+AFQ + HALSFP +V YSTCS+H ENE V+++ L P+A S G++L
Sbjct: 408 RLASLAAFQLSIVLHALSFPAARKVTYSTCSVHAAENEQVVRAALASPVARSRGWRL 464
>gi|320587893|gb|EFX00368.1| nol1 nop2 sun domain containing protein [Grosmannia clavigera
kw1407]
Length = 595
Score = 120 bits (302), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 109/380 (28%), Positives = 150/380 (39%), Gaps = 109/380 (28%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLM---------ALYQTPDVPKPRYVRVNTLKMDVDSA 80
HK + L + +R S++DL A P R++R+NTLK +
Sbjct: 133 HKARLTAELTRARLRRHAASLDDLRRQVEQVAARASRTHAGAPATRWIRINTLKTTL--- 189
Query: 81 VLELGKQFVVQK----------------------------DDLVPDLLILPPGCDLHVHP 112
++L F + DD VPDL+ +P P
Sbjct: 190 AVQLATTFADYRRVASLPELWEDDDSTSNTTSDNNARIFIDDNVPDLVAVPVSTSSAASP 249
Query: 113 LI--------VNGCVFLQGKASSMVAAALAPKPGWKVLD------ACSAPGNKTVHLAAL 158
+ +G + Q KAS A L P + AC+APGNKT HLAAL
Sbjct: 250 TVDPTRSDAYRSGAIIFQDKASCFPAYLLDPASVFDDDQDVDLVDACAAPGNKTSHLAAL 309
Query: 159 MKG------KGKIVACELNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEV 210
+ + I A E + R + L+ ++ +GA ++ + DFL +DP Y V
Sbjct: 310 TRPLLLERPRPCIFAFEKDPRRAKTLQSMLQTAGALDLTTIGAAQDFLQVDPAAALYRNV 369
Query: 211 RAILLDPSCSGSG-------------------TAAERL--------------DHLLPSHA 237
RA+LLDPSCSGSG TA ++L D H
Sbjct: 370 RALLLDPSCSGSGIVGRDTMPVLHLPKGGTEKTAGQQLKTNKKRKRPAGRQPDDKTAKHD 429
Query: 238 SGHTADP-------------TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
TAD TE RL L+AFQ L HA FP R+ YSTCS+H E
Sbjct: 430 FAKTADTIVAAAENAVTESETESARLTALAAFQLTLLLHAFRFPAARRITYSTCSVHAQE 489
Query: 285 NEDVIKSVLPIAMS-FGFQL 303
NE V+ L A + FG++L
Sbjct: 490 NEQVVVRALTSASARFGWRL 509
>gi|115397347|ref|XP_001214265.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114192456|gb|EAU34156.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 538
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 102/347 (29%), Positives = 150/347 (43%), Gaps = 84/347 (24%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDV---PK----PRYVRVNTLKMDVDSAVL 82
HK ++ + VR S+ +L A + V P+ PR+VRVN ++ + + +
Sbjct: 103 HKTRLKGEFVKARVRRGCASLAELRAAVRREKVALAPRRSVYPRWVRVNNVRSSLGAQLE 162
Query: 83 ELGKQFV-------VQKDDL--------------VPDLLILPPGCDLHVHPLIVNGCVFL 121
+ + ++ DD +PDLL PP ++ P G + L
Sbjct: 163 STFRGYTPVDGLAALEDDDAENDGDEKKLVLDPHIPDLLAFPPTVEMTALPAYHRGEIIL 222
Query: 122 QGKASSMVAAALAPKPGW--KVLDACSAPGNKTVHLAALM------------KGKGKIVA 167
Q A A W +LD C+APGNK+ HL L+ + + +I++
Sbjct: 223 QDTAPCFPAYGPLVDGEWLGDLLDGCAAPGNKSTHLVLLLGKQSAQKQEKSERERPRIIS 282
Query: 168 CELNKERVRRLKDTIKLSGAAN-IEVLHG-DFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+ + R + L+ + +GA + + VL G DFL LDP D + V +LLDPSCSGSG
Sbjct: 283 MDASPVRAKTLQKMVATAGADSLVTVLPGQDFLALDPADERFQAVSGLLLDPSCSGSGII 342
Query: 226 AERLD---HLLPS-------------------HASGHTADPTEM---------------- 247
R D +LP+ H T DP +
Sbjct: 343 G-RDDVPSLVLPADGKPAPTKKPLRGKKRKQRHGEEETVDPPAVQDVSQAENELASSHLD 401
Query: 248 -ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL KLS Q + + HAL FP RV YSTCSIH +ENE V++ VL
Sbjct: 402 PERLTKLSNLQTRIVEHALGFPAATRVTYSTCSIHLIENEAVVERVL 448
>gi|452002364|gb|EMD94822.1| hypothetical protein COCHEDRAFT_1191617 [Cochliobolus
heterostrophus C5]
Length = 1318
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 109/357 (30%), Positives = 152/357 (42%), Gaps = 81/357 (22%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK----------PRYVRVNTLKMD 76
+ HK + L + +R+ ++E + K PR+VRVNT+K
Sbjct: 99 ITRHKARLSAELTKARIRHGFSTLEAFKEAVNDGGLDKEDGNASKSRHPRWVRVNTIKTT 158
Query: 77 VD------------SAVLEL-----GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCV 119
+ + VLE V +D +P+LL LP DL G +
Sbjct: 159 LKEQLATTFAGYTKTGVLEDVLTAPKSSKVYYEDPNIPNLLALPSKVDLSRSIAYTKGQI 218
Query: 120 FLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALMKGK------GKIVACELNK 172
Q KAS A L P P V+DA +APGNKT HLAA++ + K++A E +K
Sbjct: 219 IFQDKASCFPAYLLDPTPDDGDVIDATAAPGNKTTHLAAIVSDRRQPGEEQKVIAFERDK 278
Query: 173 ERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
R L+ +KL+ A +I + G DF+ P Y+ V AILLDPSCSG+G R D
Sbjct: 279 GRTFTLQKMVKLASADSIVQVKGNSDFIAAKPASDEYANVGAILLDPSCSGTGIVG-RDD 337
Query: 231 HL---LPSHASGHT---------------------ADPT---EM---------------E 248
+ LP T A PT +M E
Sbjct: 338 AIKMHLPDTPGSQTISQKPERGKKRKRGDEATKGDAQPTLNLDMDDSTPEETPVQGKLTE 397
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQL 303
RL LS+FQ L HA+ F ++ YSTCSIH ENE V+ L +A G+++
Sbjct: 398 RLAALSSFQLHILTHAMRFESAHKITYSTCSIHFEENEGVVFQALASSVAKERGWRI 454
>gi|19074454|ref|NP_585960.1| NOP2-LIKE NUCLEOLAR PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|19069096|emb|CAD25564.1| NOP2-LIKE NUCLEOLAR PROTEIN [Encephalitozoon cuniculi GB-M1]
gi|449330099|gb|AGE96363.1| nop2-like nucleolar protein [Encephalitozoon cuniculi]
Length = 364
Score = 119 bits (297), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/216 (35%), Positives = 114/216 (52%), Gaps = 23/216 (10%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+VR+NTL+ + + F+ + V + + ++ NG +Q +S
Sbjct: 111 FVRINTLRGGTEEDI-----GFLDYEKSCVDGVYKILDSKNIVFSEGYKNGKFVIQNISS 165
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P+ G +V+D CSAPGNKT LA +M+ GKI A E +K R L+ + G
Sbjct: 166 CLPAHILDPEEGSRVIDTCSAPGNKTSQLAMIMRNTGKIYAFERSKNRAETLRAQLFKLG 225
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+N EV+ DF+N +P+D + +R IL DPSCSGSG HL G+ D
Sbjct: 226 VSNTEVVEDDFMNANPED--FEGIRYILCDPSCSGSGM------HL------GYKMDK-- 269
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQ 282
ER+ L +FQ + +RHAL F E++VYS CS H+
Sbjct: 270 -ERIEGLKSFQIEIVRHALRFRP-EKLVYSVCSDHR 303
>gi|396081661|gb|AFN83276.1| Nop2-like nucleolar protein [Encephalitozoon romaleae SJ-2008]
Length = 365
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 75/216 (34%), Positives = 113/216 (52%), Gaps = 23/216 (10%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+VR+NTLK + + +F+ K V + + D+ +G +Q +S
Sbjct: 111 FVRINTLKNGTERDI-----EFLSPKRTCVEGVYKIVDSKDMIFSQEYKDGKFVIQNISS 165
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L PK +V+D CSAPGNKT L+ +MK G+I A E ++ R + L+D ++ G
Sbjct: 166 CLPAYILNPKECSRVIDTCSAPGNKTSQLSMIMKNTGRIYAFERSETRAKTLQDQLERLG 225
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+N+EV+ DF+ P D + +++ IL DPSCSGSG HL G+ D
Sbjct: 226 VSNVEVIENDFMKASPDD--FKDIQYILCDPSCSGSGM------HL------GYKMDE-- 269
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQ 282
+R+ L FQ + HAL F ER+VYS CS H+
Sbjct: 270 -KRIESLKLFQIAIVEHALRFKP-ERLVYSVCSDHK 303
>gi|391336185|ref|XP_003742462.1| PREDICTED: uncharacterized protein LOC100902547 [Metaseiulus
occidentalis]
Length = 783
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 89/292 (30%), Positives = 126/292 (43%), Gaps = 55/292 (18%)
Query: 41 LLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP--- 97
L + ++S+ +Y +P+ RY +N LK+ + L K ++K P
Sbjct: 402 LRYQETLRSLAHAAKIYPAAQIPRIRYAILNRLKISQSTLGKMLNKLGFIEKKFEAPPGT 461
Query: 98 -----------------------------DLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
D+L+ D+H+ L++ L S M
Sbjct: 462 TPDAVIESYWNHLDNLRASEYSWDIHFPDDVLVFSSKGDIHMKKLVLEWKQLLMFNKSVM 521
Query: 129 V-AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
AL PK G VLD C+APGNK+V A G +V+CE N +R + L + ++LSG
Sbjct: 522 APVQALDPKNGDTVLDTCAAPGNKSVLAAQSCSG---LVSCERNNKRFKLLAENLELSGV 578
Query: 188 A---NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
EV+H DFL +D DP +V L+DPSCSG G DH L
Sbjct: 579 TGKRRCEVIHSDFLKIDNSDPRLIKVTKALVDPSCSGGGD----FDHTL----------- 623
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
+ R+ KL+ Q L+ L P + VVYSTCS ENE V+ VL A
Sbjct: 624 -DQSRVEKLANLQTMILKKVLRLPSLRTVVYSTCSSQTRENEGVVTEVLEWA 674
>gi|451845450|gb|EMD58763.1| hypothetical protein COCSADRAFT_129494 [Cochliobolus sativus
ND90Pr]
Length = 568
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 100/309 (32%), Positives = 139/309 (44%), Gaps = 71/309 (22%)
Query: 65 PRYVRVNTLKMDV-----------------DSAVLELGKQFVVQKDDLVPDLLILPPGCD 107
PR+VRVNT+K + D+ + V +D +P+LL LP D
Sbjct: 147 PRWVRVNTIKTTLQEQLATTFTGYTKTEVLDNVLTAPKSSKVYYEDPNIPNLLALPSKVD 206
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPG-WKVLDACSAPGNKTVHLAALMKGKGK-- 164
L G + Q KAS A L P P V+DA +APGNKT HLAA++ + +
Sbjct: 207 LSRSIAYTKGQIIFQDKASCFPAYLLDPTPDDGDVIDATAAPGNKTTHLAAIVSDRKQPG 266
Query: 165 ----IVACELNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPS 218
++A E +K R L+ +KL+ A +I + G DF+ P+ Y+ V AILLDPS
Sbjct: 267 EEQNVIAFERDKGRTFTLQKMVKLASADSIVQVKGNSDFIAAKPELDEYANVGAILLDPS 326
Query: 219 CSGSGTAAERLDHL---LPSHASGHT---------------------ADPT---EM---- 247
CSG+G R D + LP T A PT +M
Sbjct: 327 CSGTGIVG-RDDAIKMHLPDAPGSQTTPHKPGKGKKRKRGDEATKADAQPTLNLDMDDSA 385
Query: 248 -----------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--P 294
ERL LS+FQ L HA+ F ++ YSTCSIH ENE V+ L
Sbjct: 386 PEETPIQGKLTERLAALSSFQLHILTHAMRFESAHKITYSTCSIHFEENEGVVFQALASS 445
Query: 295 IAMSFGFQL 303
+A + G+++
Sbjct: 446 VAKNRGWRI 454
>gi|217967819|ref|YP_002353325.1| sun protein [Dictyoglomus turgidum DSM 6724]
gi|217336918|gb|ACK42711.1| sun protein [Dictyoglomus turgidum DSM 6724]
Length = 430
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 86/231 (37%), Positives = 118/231 (51%), Gaps = 20/231 (8%)
Query: 68 VRVNTLKM---DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+RVNTLK+ D+ +LE +F + +LV LI+ G D L G +Q +
Sbjct: 173 IRVNTLKISKKDLKEKLLERRIKF--KDGNLVDQALIIEDGFDFERSDLFNEGYFVIQSE 230
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS + A L PKPG +V+D CSAPG K+ HLA LMK +GKI++ ++NK R+R +++ K
Sbjct: 231 ASMLPALILNPKPGNRVIDLCSAPGLKSTHLAELMKNQGKIISVDINKNRLRLVEENAKR 290
Query: 185 SGAANIEVLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
G + IE D LNL D ++ V LLD CSG G + + P D
Sbjct: 291 LGISIIETFSQDVLNLPSSLDRSFDRV---LLDAPCSGLGVISHK-----PEIKWRLKRD 342
Query: 244 PTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVL 293
+ LS Q K L A E R+VYSTC+I ENE V+ L
Sbjct: 343 D-----IYNLSEMQVKMLERAGKLLKREGRMVYSTCTITWHENESVLLQFL 388
>gi|169599092|ref|XP_001792969.1| hypothetical protein SNOG_02362 [Phaeosphaeria nodorum SN15]
gi|160704533|gb|EAT90574.2| hypothetical protein SNOG_02362 [Phaeosphaeria nodorum SN15]
Length = 1196
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 102/311 (32%), Positives = 144/311 (46%), Gaps = 74/311 (23%)
Query: 65 PRYVRVNTLKMDVDSAVLEL-----------------GKQFVVQKDDLVPDLLILPPGCD 107
PR+VRVNT+K ++ + G V +D +P+LL LP +
Sbjct: 147 PRWVRVNTIKTTLEDQLRTTFSGFKKADSLAEVLAARGSTKVYYEDPNIPNLLALPSRIN 206
Query: 108 LHVHPLIVNGCVFLQGKASSMVAA--ALAPKPGWKVLDACSAPGNKTVHLAALMK----- 160
L + G + Q KAS A L+ G V+D C+APGNKT HLAA++
Sbjct: 207 LGRNEAYAKGHIIFQDKASCFPAYLLDLSADDG-DVIDGCAAPGNKTTHLAAIVSSLNAS 265
Query: 161 GKG-KIVACELNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDP 217
G+G K+VA E +++R L+ +KL+ A +I + G DFL P +S V AI+LDP
Sbjct: 266 GEGQKVVAFERDEKRTTTLQKMVKLASADSIVSIKGASDFLAAKPHSNEFSNVGAIVLDP 325
Query: 218 SCSGSGTAAERLD----HLLPSH--ASG-----------------HTADPTEM------- 247
SCSG+G R D HL S+ A+G + A+P +
Sbjct: 326 SCSGTGIVG-RDDGIKIHLPVSNPIAAGSQKTSKGKKRKRDDEKSNVAEPATLAVDLDDA 384
Query: 248 -------------ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL- 293
ERL+ LS FQ L HA+ F ++ YSTCSIH ENE V+ L
Sbjct: 385 TTPEETPAEDKLTERLDTLSNFQLHILTHAMRFASAHKITYSTCSIHFEENEGVVFQALA 444
Query: 294 -PIAMSFGFQL 303
IA G+++
Sbjct: 445 SSIANKRGWKI 455
>gi|323303179|gb|EGA56978.1| YNL022C-like protein [Saccharomyces cerevisiae FostersB]
Length = 411
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 143/294 (48%), Gaps = 44/294 (14%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDL-MALYQTPDVPKPRYVRVNTLKM-- 75
P+ D +++ K + + +L ++ KV+ + +L ++ + D+P R++R+N LK
Sbjct: 109 PIKD---YVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHP 165
Query: 76 --DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+ + + EL K+F ++ D+ +P+L + P + H L +G +
Sbjct: 166 NGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKII 225
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KGKGKIVACELNKER 174
+Q +AS A L P P V+D+CSAPGNKT H A+ + +I A E + ER
Sbjct: 226 IQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPER 285
Query: 175 VRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL---- 229
+ L+ IK++G + NI V GDF L + Y +V ++DPSCSGSG +
Sbjct: 286 AKVLQKMIKIAGCSPNISVNVGDFTKLATPE-KYKDVTCFIVDPSCSGSGIFGRKFFDSF 344
Query: 230 -----------DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER 272
++P A RL KLS+FQ + ++HA+SFP ++
Sbjct: 345 NRRKIDDKDDDGGIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPAAKK 398
>gi|345481898|ref|XP_001605840.2| PREDICTED: putative methyltransferase NSUN5 [Nasonia vitripennis]
Length = 561
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 80/254 (31%), Positives = 127/254 (50%), Gaps = 42/254 (16%)
Query: 65 PRYVRVNTLKMDVD------------------------SAVLELGKQFVVQKDDLVPDLL 100
P Y+R+NTL + ++ S + LG++ + +D + +LL
Sbjct: 152 PVYIRINTLTISIEDTLNAFYKEGWNLLPRCNSYSEYLSVLQRLGERDFI-RDYHISELL 210
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK 160
PPG + HP + G Q K S + + L PKP V DAC+APG KT HLA +M
Sbjct: 211 AFPPGTLFYNHPGYIKGKFLYQDKGSCLSSFLLNPKPDSVVFDACAAPGIKTNHLANIMN 270
Query: 161 GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCS 220
G I A +++ RV+++ D + L+ N +L DF+++D AY++V+ IL++PS +
Sbjct: 271 NTGLIYANDIHPLRVKKMIDLLGLT-ETNARILKEDFISMDYS--AYADVKYILVEPSST 327
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCS 279
SG +A G + R +S LR AL FP V+RVVY+ CS
Sbjct: 328 YSGIF----------YAVGARMKKVGLMRRQFVS---NTMLRSALQQFPNVKRVVYTICS 374
Query: 280 IHQVENEDVIKSVL 293
++ E E++I+ V+
Sbjct: 375 LYSEEGEEIIEQVM 388
>gi|194900030|ref|XP_001979560.1| GG16141 [Drosophila erecta]
gi|190651263|gb|EDV48518.1| GG16141 [Drosophila erecta]
Length = 532
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 106/196 (54%), Gaps = 25/196 (12%)
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
H L+ + + LQ KA+S+ A LAP G VLD C+APG KT+HL +MK KG I + EL
Sbjct: 300 HELVRSKRLILQNKATSLAAELLAPPMGATVLDMCAAPGMKTLHLCNVMKNKGCIYSVEL 359
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG------T 224
+ R L + + +G ++ + GD L+L + +++V IL+DPSCSGSG
Sbjct: 360 DHVRYETLCEITEQAGCEIVKPILGDALDLTSE--RFADVEYILVDPSCSGSGMQNRMTV 417
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQV 283
ER D RL +L Q K L HA+S FP V+R+ Y TCS+ +
Sbjct: 418 CDERKDD----------------NRLYRLQGVQIKMLSHAMSAFPNVKRIAYCTCSLWKE 461
Query: 284 ENEDVIKSVLPIAMSF 299
ENE V++ L + S+
Sbjct: 462 ENEQVVQRCLQLNPSY 477
>gi|303389837|ref|XP_003073150.1| Nop2-like nucleolar protein [Encephalitozoon intestinalis ATCC
50506]
gi|303302295|gb|ADM11790.1| Nop2-like nucleolar protein [Encephalitozoon intestinalis ATCC
50506]
Length = 364
Score = 117 bits (294), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 125/250 (50%), Gaps = 31/250 (12%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
++R+N LK + + F+ + + + + D+ NG +Q +S
Sbjct: 111 FIRINPLKNGTEKDI-----DFLKHEKTCIDGVYKILDSKDIVFSEEYKNGKFLIQNISS 165
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P G +V+D CSAPGNKT LA +MK GKI A E +K R + LK ++ G
Sbjct: 166 CLPAHILNPDEGSRVIDTCSAPGNKTSQLAMIMKNTGKIYAFERDKARAKTLKIRLERLG 225
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
N +V+ DF+ +P+D + ++R IL DPSCSGSG H +
Sbjct: 226 VNNTDVIEEDFMKTNPED--FKDIRYILCDPSCSGSGM---------------HFGYKMD 268
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--------IAMS 298
ER+ L +FQ ++HAL F E+++YS CS H+ E E+V++ +L I+M
Sbjct: 269 KERIEGLKSFQVGIVKHALKFKP-EKLMYSVCSNHKEEGEEVVEEILKDSEYELEDISMF 327
Query: 299 FGFQLATPFP 308
+G + FP
Sbjct: 328 WGPSCPSEFP 337
>gi|312383507|gb|EFR28570.1| hypothetical protein AND_03366 [Anopheles darlingi]
Length = 461
Score = 117 bits (293), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 92/238 (38%), Positives = 121/238 (50%), Gaps = 39/238 (16%)
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
+PR+VRVNT ++++ A + ++ + D+ PD + +N +Q
Sbjct: 110 EPRFVRVNTELLNLEGAKRLMQEEGWILVDEEFPD------------YQSFLNR---VQS 154
Query: 124 KASSMVAAALAP----KPGWK--VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
S A L P KP K VLD CSAPG K HLA+LMK KG++ A E N ER +
Sbjct: 155 LTDSEYMACLVPTYLLKPPKKSVVLDMCSAPGMKATHLASLMKNKGRLYAVERNAERYKL 214
Query: 178 LKDTIKLSGAANIEVLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
L G I+ + D L+L D + P V ILLDPSCSGSG LD L
Sbjct: 215 LCQYAAPFGV--IKTIQADCLDLTDEQVPG---VEYILLDPSCSGSGM----LDRL---- 261
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVIKSVL 293
+P + RL KL+ Q K L HA+ SFP R+VYSTCSIH ENE ++ VL
Sbjct: 262 ---RMPEPVDEGRLYKLAGLQYKLLSHAMNSFPNARRIVYSTCSIHPEENEKLVMGVL 316
>gi|46124797|ref|XP_386952.1| hypothetical protein FG06776.1 [Gibberella zeae PH-1]
Length = 578
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 103/346 (29%), Positives = 146/346 (42%), Gaps = 74/346 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTP----DVPKPRYVRVNTLK----------- 74
HK I +R K+ ++E L + + PR+VRVN +K
Sbjct: 102 HKARISSEFKLARLRRKMPTLEALKGQVERECAGEETNYPRWVRVNAVKSTLEEQLETTF 161
Query: 75 ------MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
++ V G+ + D VP+L+ + G DL +G + LQ KAS
Sbjct: 162 SKYTRARSINEVVTNAGRLIYI--DSHVPNLVAITAGIDLTKTEAYTSGKIILQDKASCF 219
Query: 129 VAAALAPKP-GWKVLDACSAPGNKTVHLAALMKGKG--------KIVACELNKERVRRLK 179
A L P+ ++DACSAPGNKT HLAA++K I A E + R + L
Sbjct: 220 PAYLLDPRSEDGDLIDACSAPGNKTTHLAAIVKQHTPEFDTPAQTIYAFEKDSRRSQVLH 279
Query: 180 DTIKLSGAANIEVL--HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL--DHLLPS 235
+K++G+ + + DF+ + P Y V A+LLDPSCSGSG D LP
Sbjct: 280 KMVKIAGSDYMTKIGFGQDFMQVKPTADNYKSVGALLLDPSCSGSGIVGRDSMPDLHLPE 339
Query: 236 HASGHTADP---------------------------TEM---------ERLNKLSAFQKK 259
SG+ P EM RL LS+FQ
Sbjct: 340 PYSGNGKTPPAKPNNRKRKHEKVEPAPENVMIDDDGNEMAIKSEKDLETRLEALSSFQLV 399
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
L HA FP +++ YSTCS+H ENE V+ L IA G+++
Sbjct: 400 LLLHAFRFPSAKKITYSTCSVHVQENERVVMRALESDIAKRRGWRI 445
>gi|409095981|ref|ZP_11216005.1| tRNA/RNA cytosine-C5-methylase [Thermococcus zilligii AN1]
Length = 451
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 83/239 (34%), Positives = 126/239 (52%), Gaps = 16/239 (6%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLH 109
E+ + L + + P+ YVR NTLK DVDS L + V VPD+L +L +
Sbjct: 174 EEAVRLLLSNNKPQRYYVRANTLKTDVDSLREYLEENGVRTALTPVPDVLKVLEYETPVT 233
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
G +Q AS+ VA LAP+PG +VLD +APG+KT H AALM+ +G+IVA +
Sbjct: 234 RLDWYKQGKFVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENRGEIVAVD 293
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ +R+ R+K+ +KL G N+ ++H D + K+ I+LD CS SGT +
Sbjct: 294 YSYDRLMRMKEKMKLLGIENVRLVHADGQSFRDKEG----FDKIILDAPCSSSGTYRQ-- 347
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENED 287
P H + E++ ++ + Q+ LR+A + + YSTCSI ENE+
Sbjct: 348 ---FPE-VKWHFNE----EKIGRIISVQRNMLRNAYENLRDGGEMTYSTCSIRIDENEE 398
>gi|20094975|ref|NP_614822.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19888229|gb|AAM02752.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 450
Score = 116 bits (290), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 131/248 (52%), Gaps = 17/248 (6%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQF--VVQKDDLVPDLLILPPGCDL 108
++++AL + + P +RVNTLK+D + L +++ V+ + ++L +P G +
Sbjct: 170 DEVVALLEANNRRPPLTIRVNTLKVDPEELAERLQRKYRVTVEPGRFLDEILKIPEGLPI 229
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P G +Q +A+++ +A L PKPG V+D C+APG KT H+A LM G+GKIVA
Sbjct: 230 GEMPEWEEGLFVIQDEAAALASAVLNPKPGEVVVDLCAAPGGKTTHMAQLMGGEGKIVAI 289
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++++ R+ RL++ + G + H P+ A+L+DP CS GT
Sbjct: 290 DVDEVRMERLREIAERMGVLDCIETHLMDGREAPEKLGREFADAVLVDPPCSADGT---- 345
Query: 229 LDHLLPSHASGH-TADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVEN 285
+P + P E+ERL K FQ + L+ PG R++YSTCS+ E+
Sbjct: 346 ----IPKNPERRWRITPDELERLPK---FQYELLKAGAEMVKPG-GRLLYSTCSMFPEED 397
Query: 286 EDVIKSVL 293
E+V++ L
Sbjct: 398 EEVVRRFL 405
>gi|269859742|ref|XP_002649595.1| 16S rRNA m(5)C 967 methyltransferase [Enterocytozoon bieneusi H348]
gi|220066958|gb|EED44427.1| 16S rRNA m(5)C 967 methyltransferase [Enterocytozoon bieneusi H348]
Length = 352
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 73/191 (38%), Positives = 101/191 (52%), Gaps = 32/191 (16%)
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
V +Q S + L+P+PG V+DA +APGNKT A + GKI+A E +K R + L
Sbjct: 145 VKIQSFESCLPVHFLSPEPGSIVIDATAAPGNKTTQCADKLNNTGKILAVEKDKNRFQIL 204
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKD--PAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
+ IK G N+EV++ DFL+++P P Y I++DP+CSGSG
Sbjct: 205 QTMIKDYGCTNVEVVNRDFLDIEPSSITPDY-----IIVDPTCSGSGI------------ 247
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--- 293
H +R+ KL FQ L HAL F +++VYS CSIH E E+VIK +L
Sbjct: 248 ---HVNYKKNEQRIEKLKNFQFIILNHALKF-NAKKIVYSVCSIHPEEGEEVIKEILEKN 303
Query: 294 ------PIAMS 298
PIA+S
Sbjct: 304 PQYTLQPIAIS 314
>gi|323331993|gb|EGA73405.1| YNL022C-like protein [Saccharomyces cerevisiae AWRI796]
Length = 396
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/291 (28%), Positives = 140/291 (48%), Gaps = 44/291 (15%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDL-MALYQTPDVPKPRYVRVNTLKM-- 75
P+ D +++ K + + +L ++ KV+ + +L ++ + D+P R++R+N LK
Sbjct: 109 PIKD---YVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHP 165
Query: 76 --DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+ + + EL K+F ++ D+ +P+L + P + H L +G +
Sbjct: 166 NGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKII 225
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KGKGKIVACELNKER 174
+Q +AS A L P P V+D+CSAPGNKT H + + +I A E + ER
Sbjct: 226 IQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTTSYIYPEPPKDNNTRIYAFEKDPER 285
Query: 175 VRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL---- 229
+ L+ IK++G + NI V GDF L + Y +V ++DPSCSGSG +
Sbjct: 286 AKVLQKMIKIAGCSPNISVNVGDFTKLATPE-KYKDVTCFIVDPSCSGSGIFGRKFFDSF 344
Query: 230 -----------DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269
++P A RL KLS+FQ + ++HA+SFP
Sbjct: 345 NRRKIDDKDDDGDIVPDEQEEFIAKEELQTRLAKLSSFQFQMVKHAMSFPA 395
>gi|14590712|ref|NP_142782.1| fmu protein [Pyrococcus horikoshii OT3]
gi|186972907|pdb|2YXL|A Chain A, Crystal Structure Of Ph0851
gi|3257262|dbj|BAA29945.1| 450aa long hypothetical fmu protein [Pyrococcus horikoshii OT3]
Length = 450
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 130/252 (51%), Gaps = 16/252 (6%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+RVNTLK +V+ + EL + V V + + VP +L + + G + +Q +AS
Sbjct: 189 IRVNTLKANVEEVIGELEEDGVEVVRSERVPTILKIKGPYNFDTSSAFNEGKIIVQEEAS 248
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
++ + L PKPG V+D +APG KT HLA LMK KGKI A +++K R++RLKD +K G
Sbjct: 249 AVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMG 308
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
++ L D P+ +LLD C+ SGT + P D
Sbjct: 309 IKIVKPLVKDARKA-PEIIGEEVADKVLLDAPCTSSGTIGKN-----PELRWRLRED--- 359
Query: 247 MERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-QL 303
++N++S Q++ L A L PG R++Y+TCSI + ENE I+ L + F L
Sbjct: 360 --KINEMSQLQRELLESAARLVKPG-GRLLYTTCSIFKEENEKNIRWFLNVHPEFKLVPL 416
Query: 304 ATPFPNGTAEAS 315
+P+ G E +
Sbjct: 417 KSPYDPGFLEGT 428
>gi|375082408|ref|ZP_09729468.1| tRNA/RNA cytosine-C5-methylase [Thermococcus litoralis DSM 5473]
gi|374742901|gb|EHR79279.1| tRNA/RNA cytosine-C5-methylase [Thermococcus litoralis DSM 5473]
Length = 450
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 90/270 (33%), Positives = 132/270 (48%), Gaps = 34/270 (12%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLH 109
E + L + + P+ YVRVN LK D+D L + V V D+L IL +
Sbjct: 174 ESAIRLLLSNNRPQRYYVRVNPLKTDIDKLAEYLEEHGVRTARTPVDDVLKILEYETPIT 233
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
G +Q AS+ VA LAP+ G +VLD +APG+KT H+A LM+ GKIVA +
Sbjct: 234 RLDWYKEGYFVIQDLASAYVAHVLAPEKGERVLDLAAAPGSKTFHVAHLMENTGKIVAVD 293
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE-- 227
+ ER++++K +K+ G N++++H D + K+P I+LD CS SGT +
Sbjct: 294 YSAERLQKMKAKMKVLGVKNVKLVHADGMKFKDKEP----FDKIILDAPCSSSGTYRQFP 349
Query: 228 ----RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS--FPGVERVVYSTCSIH 281
R D +++ K+ QK +R+A G E + YSTCSI
Sbjct: 350 EVKWRFDE----------------KKIKKVIQVQKAMIRNAYKNLREGGE-MTYSTCSIR 392
Query: 282 QVENEDVIKSVLPIAMSFGFQLA-TPFPNG 310
ENE+ IK + GF+L PF G
Sbjct: 393 VDENEENIKYAMN---KVGFELVDYPFSWG 419
>gi|408388394|gb|EKJ68080.1| hypothetical protein FPSE_11891 [Fusarium pseudograminearum CS3096]
Length = 578
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 102/346 (29%), Positives = 147/346 (42%), Gaps = 74/346 (21%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTP----DVPKPRYVRVNTLK----------- 74
HK I +R K+ ++E L + + PR+VRVN +K
Sbjct: 102 HKARISSEFKLARLRRKMPTLEALKEQVERECAGEEANYPRWVRVNAVKSTLEEQLETTF 161
Query: 75 ------MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
++ V G+ + D VP+L+ + G DL +G + LQ KAS
Sbjct: 162 SKYTRARSINEVVTNAGRLIYI--DSHVPNLVAITAGIDLTKTEAYTSGKIILQDKASCF 219
Query: 129 VAAALAPKP-GWKVLDACSAPGNKTVHLAALMKGKG--------KIVACELNKERVRRLK 179
A L P+ ++DACSAPGNKT HLAA++K I A E + R + L
Sbjct: 220 PAYLLDPRSEDGDLIDACSAPGNKTTHLAAIVKQHTPEFDTPAQTIYAFEKDSRRSQVLH 279
Query: 180 DTIKLSGAANIEVL--HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL--DHLLPS 235
+K++G+ + + DF+ + P Y V A+LLDPSCSGSG D LP
Sbjct: 280 KMVKIAGSDYMTKIGFGQDFMQVKPTADNYKSVGALLLDPSCSGSGIVGRDSMPDLHLPE 339
Query: 236 HASGHTADP-----------------------------------TEME-RLNKLSAFQKK 259
SG+ P ++E RL LS+FQ
Sbjct: 340 PYSGNGKTPPAKPNNRKRKHEKVEPAPENVMIDDDGNETAIKSEKDLETRLEALSSFQLV 399
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
L HA FP +++ YSTCS+H ENE V+ L IA G+++
Sbjct: 400 LLLHAFRFPSAKKITYSTCSVHVQENERVVMRALESDIAKRRGWRI 445
>gi|397639671|gb|EJK73696.1| hypothetical protein THAOC_04665, partial [Thalassiosira oceanica]
Length = 696
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 92/251 (36%), Positives = 116/251 (46%), Gaps = 63/251 (25%)
Query: 93 DDLVPDLLILPPGCD----------------LHVHPLIVNG--CVFLQGKASSMVAAALA 134
D VPDLL+LPP L V +I G +FL AS A
Sbjct: 269 DAHVPDLLVLPPSSSSWLNSEDDLVRSGRAVLQVRAIISFGFATLFLADFASPRAMLGAA 328
Query: 135 PKPG-WKVLDACSAPGNKTVHLAAL----MKGK---------------------GKIVAC 168
P G +DAC+APGNKT HLAAL M G I A
Sbjct: 329 PGGGPCDYIDACAAPGNKTSHLAALVRQAMNGSEDPGDVKKDKRKKKKSNRKAKSTIYAF 388
Query: 169 ELNKERVRRLKDTIKL----SGAANIEV--LHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222
E + R L+ ++L S A+ + V +HGDFL DP + + VRAILLDPSCSGS
Sbjct: 389 ERSSARFEILQQRMELLVPKSSASEVAVCPVHGDFLKSDPAE--FENVRAILLDPSCSGS 446
Query: 223 G--TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSI 280
G + +R D R+ L+ FQ L+HA+SFP VER+VYSTCS+
Sbjct: 447 GIVNSPDRF---------ADEGDDKGTRRVQSLANFQLTILKHAMSFPNVERIVYSTCSV 497
Query: 281 HQVENEDVIKS 291
H ENE V+ +
Sbjct: 498 HDEENEAVVST 508
>gi|118378686|ref|XP_001022517.1| conserved hypothetical protein [Tetrahymena thermophila]
gi|89304284|gb|EAS02272.1| conserved hypothetical protein [Tetrahymena thermophila SB210]
Length = 477
Score = 115 bits (287), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 115/250 (46%), Gaps = 41/250 (16%)
Query: 87 QFVVQKDDLV---PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLD 143
Q V+ KD V D++I + V+ L N + +++ ++ A P + ++D
Sbjct: 190 QAVISKDSSVLDSTDIVIQSKSSAMPVYLLFKN---IIDSQSNESLSEASRPSKSFDIID 246
Query: 144 ACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDP 202
CSAPGNKT+ A +KG+GK+ A E N++R LK+ ++ G I L+ DFL++D
Sbjct: 247 CCSAPGNKTMQAAEYIKGRGKVFAFEKNQQRFELLKERVQKYGFEQVISCLNEDFLSVDV 306
Query: 203 KDPAYSEVRAILLDPSCSGSG--------------------------TAAERLDHLLPSH 236
Y V + DPSCSG+G + ER + S+
Sbjct: 307 --TQYPNVEYFVADPSCSGTGMLNHIYFDEDQIQLEEENLQNQQTKKSFMERTQQIFESY 364
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
D +R+ L FQ K L +FP ++ YSTCSIHQ ENEDV+ L
Sbjct: 365 ------DNKMKQRIVGLGQFQLKILNKLATFPSIKAFSYSTCSIHQQENEDVVFKFLQEN 418
Query: 297 MSFGFQLATP 306
SF A P
Sbjct: 419 KSFQLVEACP 428
>gi|440683854|ref|YP_007158649.1| sun protein [Anabaena cylindrica PCC 7122]
gi|428680973|gb|AFZ59739.1| sun protein [Anabaena cylindrica PCC 7122]
Length = 455
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/299 (33%), Positives = 147/299 (49%), Gaps = 35/299 (11%)
Query: 34 IQLALAQLLVRNKVKSIEDLMA-LYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFV 89
I++ LAQL E L A + QTP + +RVN L+ +V+SA G +
Sbjct: 163 IEVWLAQL----GFAETEKLCAWMNQTPTID----LRVNILRSSLKEVESAFQSAG--VL 212
Query: 90 VQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAP 148
V++ +P L ++ + P G +Q ++ +V L PKPG V+DAC+AP
Sbjct: 213 VKRIPRLPQALRLIGSNGPIQNLPGFREGWWTIQDSSAQLVGHLLDPKPGEVVIDACAAP 272
Query: 149 GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS 208
G KT H+A LM GKI AC+ R+R+L+D + +IE+ GD NL P+ Y+
Sbjct: 273 GGKTTHIAELMGDHGKIWACDKTASRLRKLQDNARRLNLQSIEIYTGDSCNL-PQ--FYN 329
Query: 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF- 267
+ +LLD CSG GT + HA E + +LS Q K L H +F
Sbjct: 330 QADRVLLDAPCSGLGT--------MHRHADARWRQTP--ESIQQLSLLQTKLLSHTSNFV 379
Query: 268 --PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIY 324
GV +VY+TC++H ENE+VI L A +Q+ P N TA +S L I+
Sbjct: 380 KDNGV--LVYATCTLHPAENEEVISRFL--ADHPHWQVEPPRQNLTATSSTPPGWLKIW 434
>gi|406696471|gb|EKC99758.1| nucleus protein [Trichosporon asahii var. asahii CBS 8904]
Length = 610
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 78/222 (35%), Positives = 108/222 (48%), Gaps = 53/222 (23%)
Query: 117 GCVFLQGKASSMVAAALAPKPG-------------------WK----VLDACSAPGNKTV 153
G V +Q KAS M AA + +P W+ +D SAPGNKT
Sbjct: 228 GSVIIQDKASCMPAAVIMAEPASSSSSSSSSKTSKSPPKSQWEEYPDCIDGTSAPGNKTS 287
Query: 154 HLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213
++AL I A E + +R + L+ +K++G N++ + DF ++DP D Y V I
Sbjct: 288 LMSAL--STSNIYAFEKSPQRFKTLERMLKIAGCDNVQAQNEDFTSVDPND--YPTVGRI 343
Query: 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS------- 266
LLDPSCSGSG RLD+L+ D ERL+KL+ FQ + L+HAL
Sbjct: 344 LLDPSCSGSGIV-NRLDYLVDGEEENEAGD---QERLDKLAGFQVQMLQHALKCTYHTHP 399
Query: 267 ---------------FPGVERVVYSTCSIHQVENEDVIKSVL 293
P V R+VYSTCSIH+ E+E V+ +L
Sbjct: 400 HPSSANRTCGRANNPVPNVTRIVYSTCSIHKTEDESVVSRIL 441
>gi|145482435|ref|XP_001427240.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394320|emb|CAK59842.1| unnamed protein product [Paramecium tetraurelia]
Length = 390
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 88/280 (31%), Positives = 131/280 (46%), Gaps = 35/280 (12%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSA 80
G ++L HK I+ L Q + + K + AL Q P P N K+D D
Sbjct: 93 GVVARYLKTHKVLIKQLLEQNKIYEQEKKYIYIRALQQLPFESDPDEHIPNLCKVDYDIY 152
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL-QGKASSMVAAALAPKPGW 139
L K +P + G ++ Q K+S++ A L
Sbjct: 153 SQYLSK------------------------NPEFLKGNTYIVQSKSSALPAYLLLRNIKD 188
Query: 140 KV---LDACSAPGNKTVHLAALMKGK---GKIVACELNKERVRRLKDTIKLSGAANIEVL 193
K+ +D C+APGNKT+ L+ K GKI A E +++R LK+ + N+E L
Sbjct: 189 KIADIIDCCAAPGNKTIQLSHYAKQNNITGKIYAIERDEKRFEILKNRLNKYNCDNVEPL 248
Query: 194 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKL 253
+ DFL + P+D Y V+ LLDPSCSGSG R+ + S + E++ +L
Sbjct: 249 NFDFLTIKPQD--YPNVKIALLDPSCSGSGMLQLRM--IEASKDDSIQVPENKNEQVTQL 304
Query: 254 SAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
S FQ+K L H F ++ ++YSTCSI++ ENEDV + L
Sbjct: 305 SQFQQKMLHHLTFFKKLKLIIYSTCSIYKEENEDVANNFL 344
>gi|300123247|emb|CBK24520.2| unnamed protein product [Blastocystis hominis]
Length = 142
Score = 114 bits (284), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 81/147 (55%), Gaps = 11/147 (7%)
Query: 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190
A PK + V+DA +APGNKT L L++ +G + A + + +R + L + G+ NI
Sbjct: 2 AKTNPKERFDVIDATAAPGNKTTFLGDLLRDRGTVFAFDRDAKRFQILSQRCEAFGSGNI 61
Query: 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
E +HG+FL DP P + V+ IL+DPSCSGSG LD PS +R+
Sbjct: 62 ECIHGNFLETDPSSPKFQNVKCILVDPSCSGSGMTHTSLDITPPSR-----------QRI 110
Query: 251 NKLSAFQKKALRHALSFPGVERVVYST 277
L+ FQ + + HA FP V R+ YST
Sbjct: 111 QSLTKFQLQCIEHAAKFPSVRRISYST 137
>gi|341582142|ref|YP_004762634.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus sp. 4557]
gi|340809800|gb|AEK72957.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus sp. 4557]
Length = 451
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 105/315 (33%), Positives = 155/315 (49%), Gaps = 44/315 (13%)
Query: 1 MEEARRI-GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQT 59
++E RI L HP W V A + L+ + A++L LL N+
Sbjct: 144 LKERDRIEWLSVRFSHPRWYVEYAVE-LLGYDEAVRL----LLSNNR------------- 185
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGC 118
P+ YVR NTLK+DVDS L + V VPD+L IL + G
Sbjct: 186 ---PQRYYVRANTLKVDVDSLRDYLEENGVRTALTPVPDVLKILEYKTPVTRLDWYREGK 242
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+Q AS+ VA LAP+PG +VLD +APG+KT H AALM+ KG+I+A + + +R+ R+
Sbjct: 243 FVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENKGEIIAVDYSYDRLMRM 302
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
K+ +KL G N++++H D + K ++ I+LD CS SGT + P
Sbjct: 303 KEKMKLLGIKNVKLVHADGQSFKDK----AKFDKIILDAPCSSSGTYRQ-----FPE--V 351
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALS--FPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
D +++R+ + Q+ LR+A G E + YSTCSI E+E+ +VL
Sbjct: 352 KWRFDENKIKRIVNV---QRNMLRNAYENLRKGGE-MTYSTCSIRIDEDEE---NVLFAI 404
Query: 297 MSFGFQ-LATPFPNG 310
G + L PF G
Sbjct: 405 EKVGLELLDYPFDWG 419
>gi|365134343|ref|ZP_09343222.1| ribosomal RNA small subunit methyltransferase B [Subdoligranulum
sp. 4_3_54A2FAA]
gi|363614304|gb|EHL65801.1| ribosomal RNA small subunit methyltransferase B [Subdoligranulum
sp. 4_3_54A2FAA]
Length = 435
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 133/278 (47%), Gaps = 22/278 (7%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P P VRVNTL+ D+ + + +Q + + VPD L + D+ L G +
Sbjct: 172 TPPPLCVRVNTLQTDIGALEEKFARQGMATRRGAVPDSLYVECRGDVTALKLFKQGLFHV 231
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
QG+AS + AAL+P+PG VLD C+APG K+ LA M+ KG +V+C+ + R+ +
Sbjct: 232 QGEASQLACAALSPRPGDTVLDLCAAPGGKSATLAQYMENKGTLVSCDAAQNRLTLVGGA 291
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
++ G A VLH D + A++ A+L D CSG G A++ D
Sbjct: 292 LERLGVACGRVLHNDAAVY---NEAFAGADAVLCDVPCSGLGVLAKKPD----------- 337
Query: 242 ADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
++ L+ L Q+ L A + PG R+VYSTC+++ EN +++ L F
Sbjct: 338 IRQKTLDGLDGLVRLQRAILETAARYVRPG-GRLVYSTCTLNPDENAGIVRPFLKEHPEF 396
Query: 300 GFQLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337
+ GT + F L++Y P + T F+
Sbjct: 397 RTRSVECVLPGTTKDDDF---LTLY--PFRTGTDGFFI 429
>gi|428180892|gb|EKX49758.1| hypothetical protein GUITHDRAFT_46736, partial [Guillardia theta
CCMP2712]
Length = 158
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 87/143 (60%), Gaps = 16/143 (11%)
Query: 141 VLDACSAPGNKTVHLAA--LMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198
V+DAC+APGNK HLAA L KG +VA E + ER + L++T++ G ++ V D+L
Sbjct: 30 VIDACAAPGNKASHLAAVALQPDKGVLVAIEKSPEREKLLRETLRRMGCTSVRVYRRDWL 89
Query: 199 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQK 258
+ D S+ AI++DPSCS SG + +D A P+ RL LS FQ+
Sbjct: 90 QVSHDDELLSQADAIVVDPSCSNSGVLRDAMD-----------ASPS---RLRGLSDFQR 135
Query: 259 KALRHALSFPGVERVVYSTCSIH 281
KAL HALSFP V+ VVYSTCS+H
Sbjct: 136 KALIHALSFPSVKFVVYSTCSVH 158
>gi|429963237|gb|ELA42781.1| hypothetical protein VICG_00096 [Vittaforma corneae ATCC 50505]
Length = 439
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 94/184 (51%), Gaps = 19/184 (10%)
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
V +Q +S + A L P+ V+DA ++PGNKT HL ++M GKI A E + +R + L
Sbjct: 233 VKIQNFSSCLPAFILNPEMNSTVIDAAASPGNKTTHLCSIMNNTGKIYAFERDAKRYQTL 292
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ I GA N+E ++ DFL P+ + ILLDPSCSGSG
Sbjct: 293 VEQIAKYGAENVEAIYSDFLKASPEQ---YKADYILLDPSCSGSGI-------------- 335
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMS 298
H +R+N+L FQ L HA F + VVYS CS H+ E EDVIK L S
Sbjct: 336 -HVNYVKNQQRINRLKNFQAMMLNHAFKF-NPKAVVYSACSYHKEECEDVIKEALEKNPS 393
Query: 299 FGFQ 302
+ +
Sbjct: 394 YELE 397
>gi|223478128|ref|YP_002582529.1| tRNA/RNA cytosine-C5-methylase [Thermococcus sp. AM4]
gi|214033354|gb|EEB74181.1| tRNA/RNA cytosine-C5-methylase [Thermococcus sp. AM4]
Length = 451
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 128/249 (51%), Gaps = 26/249 (10%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFL 121
P+ YVR NTLK DVDS L + V VPD+L +L + G +
Sbjct: 186 PQRYYVRANTLKTDVDSLRDYLEENGVRTALTPVPDVLKVLDYRTPVTRLDWYKEGKFVI 245
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q AS+ VA LAP+PG +VLD +APG+KT H AALM+ +G+IVA + + +R+ R+K+
Sbjct: 246 QDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENRGEIVAVDYSYDRLMRMKEK 305
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
+KL G N++++H D + K ++ I+LD CS SGT + P
Sbjct: 306 MKLLGIKNVKLVHADGQSFRDK----AKFDRIILDAPCSSSGTYRQ-----FP-----EV 351
Query: 242 ADPTEMERLNKLSAFQKKALRHALS--FPGVERVVYSTCSIHQVENED--------VIKS 291
+ ++ ++ + Q+ LR+A G E + YSTCSI E+E+ V
Sbjct: 352 KWRFDENKIKRIISVQRNMLRNAYENLREGGE-MTYSTCSIRVDEDEENVLFAVERVGLE 410
Query: 292 VLPIAMSFG 300
V+P S+G
Sbjct: 411 VIPYDFSWG 419
>gi|401826887|ref|XP_003887536.1| tRNA/rRNA cytosine-C5-methylase [Encephalitozoon hellem ATCC 50504]
gi|392998542|gb|AFM98555.1| tRNA/rRNA cytosine-C5-methylase [Encephalitozoon hellem ATCC 50504]
Length = 371
Score = 111 bits (278), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 72/216 (33%), Positives = 109/216 (50%), Gaps = 23/216 (10%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+VR+N LK + + L + + + + D+ P +G +Q +S
Sbjct: 110 FVRINALKNGTEEDISTLSYE-----KTCIEGVYKVLDSKDMISSPGYRDGKFIIQNISS 164
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P+ G +V+D CSAPGNKT L+ +MK GKI A E ++ R + L+ ++ G
Sbjct: 165 CLPAYILNPREGSRVIDTCSAPGNKTSQLSMIMKNTGKIYAFEKSESRAKTLQLQLERLG 224
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+N EV+ GDF+ P D + + IL DPSCSGSG HL G+ D
Sbjct: 225 VSNTEVIEGDFMKASPDD--FKSIDYILCDPSCSGSGM------HL------GYRKDE-- 268
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQ 282
+R+ L FQ ++HA F E++VYS CS H+
Sbjct: 269 -KRIESLKLFQIAIVKHAFKFEP-EKLVYSVCSDHK 302
>gi|332159134|ref|YP_004424413.1| sun protein (fmu protein) [Pyrococcus sp. NA2]
gi|331034597|gb|AEC52409.1| sun protein (fmu protein) [Pyrococcus sp. NA2]
Length = 450
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 144/316 (45%), Gaps = 65/316 (20%)
Query: 2 EEARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD 61
E+ R + L HP W V L+ + A++L L+ +
Sbjct: 146 EKDRIVWLSIRFSHPRWYVEYVVN-LLGYDEAVRLLLSNMR------------------- 185
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIVNG 117
P+ YVRVNTLK DVD L V DD++ L P L + G
Sbjct: 186 -PQRYYVRVNTLKADVDKVRKYLEDNGVKVSLTPVDDVLKVLDYEKPVTKLEWYK---KG 241
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
+Q AS+ VA L P+PG +VLD +APG+KT H AALM+ KG+IVA + + +R+ +
Sbjct: 242 YFVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRLMK 301
Query: 178 LKDTIKLSGAANIEVLHGD---FLNLDPKDPAYSEVRAILLDPSCSGSGTAAE------R 228
+K+ +K+ G N++++H D FL+ D D ++LD CS SGT + R
Sbjct: 302 MKERMKILGVKNVKLVHADGQSFLDKDKFDK-------VILDAPCSSSGTYRQFPEVKWR 354
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENED 287
D E++ ++ Q+ L +A + + YSTCSI ENE+
Sbjct: 355 FDE----------------EKIKRIINVQRNMLLNAYRNLKEGGEMTYSTCSIRIDENEE 398
Query: 288 VIKSVLPIAMSFGFQL 303
+ A+ GF+L
Sbjct: 399 NV----IFALEKGFEL 410
>gi|242398901|ref|YP_002994325.1| TRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family, fused to N-
terminal NusB regulator domain [Thermococcus sibiricus
MM 739]
gi|242265294|gb|ACS89976.1| TRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family, fused to N-
terminal NusB regulator domain [Thermococcus sibiricus
MM 739]
Length = 450
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 88/266 (33%), Positives = 135/266 (50%), Gaps = 26/266 (9%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQK---DDLVPDLLILPPGC 106
E+ + L + + P+ Y+RVN LK D+DS L + V V + DD++ L P
Sbjct: 174 EEGLRLLLSNNKPQRYYIRVNPLKTDIDSLSDYLEEHGVRVTRTPVDDILKVLEYKTPIT 233
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
L + G +Q AS+ VA L+P+ G +VLD +APG+KT H+A LM+ G+I+
Sbjct: 234 HLEGYK---EGYFVIQDLASAYVAHVLSPEKGERVLDLAAAPGSKTFHVAQLMENTGEII 290
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + + ER+R+++ +K+ G N++++H D + KD + I+LD CS SGT
Sbjct: 291 AVDYSLERLRKMETKMKILGVKNVKLVHADGMKF--KDM--RKFDKIILDAPCSSSGTYR 346
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVEN 285
+ P E++ K+ QK +R+A E + YSTCSI EN
Sbjct: 347 Q-----FPEVKWRFNK-----EKIKKVIQVQKAMIRNAYKNLRDEGEMTYSTCSIRIDEN 396
Query: 286 EDVIKSVLPIAMSFGFQLAT-PFPNG 310
E+ +K L GF L T PF G
Sbjct: 397 EENVKYALE---KVGFDLVTYPFSWG 419
>gi|440493989|gb|ELQ76405.1| Proliferation-associated nucleolar protein (NOL1)
[Trachipleistophora hominis]
Length = 398
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 64/161 (39%), Positives = 87/161 (54%), Gaps = 21/161 (13%)
Query: 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEV 192
L P V+D C++PGNKT HL+A+M G I A E + +R + LK ++L N++
Sbjct: 203 LNPPFNSTVIDTCASPGNKTSHLSAIMNNTGLIYAVEKDFKRYKILKQNLELCNVKNVKT 262
Query: 193 LHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNK 252
++ DFL L+ +L+DPSCSGSG H R+
Sbjct: 263 MNNDFLELNL------NAEYLLVDPSCSGSGI---------------HNDYVKNHNRVKL 301
Query: 253 LSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
LS+FQKK L HAL+ G +RVVYSTCS H+ ENE V+ VL
Sbjct: 302 LSSFQKKILIHALNTSGAKRVVYSTCSSHKEENEIVVDHVL 342
>gi|428185390|gb|EKX54243.1| hypothetical protein GUITHDRAFT_100489 [Guillardia theta CCMP2712]
Length = 537
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 97/312 (31%), Positives = 134/312 (42%), Gaps = 73/312 (23%)
Query: 65 PRYVRVNTLKMDVDSA----------------------------------VLELGKQFVV 90
PRYVRVN K +++S ++E K +V
Sbjct: 133 PRYVRVNVRKTNMESVLQSFQLKGWNVKTVPSEKSSKKQTADAAPAKKNNMVEPPKGTIV 192
Query: 91 QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAP-KPGWKVLDACSAPG 149
D ++ +LL P G L + G + LQ ++S + A AL P PG +D C+APG
Sbjct: 193 M-DSIIKNLLAFPAGTSLFADRMFHGGEIILQDRSSCLSAVALDPLPPGAICVDTCAAPG 251
Query: 150 NKTVHLAALM----------------KGKGKIVACELNKERVRRLKDTIKLSGAANIEVL 193
NKT H+AAL+ KG+I+A E +K R L+ + G ++ +
Sbjct: 252 NKTSHVAALLYEAHSQALLEGATGKEAKKGQILAFERDKVRESVLRKQMVKLGCNDVVEV 311
Query: 194 HG-DFLNLDPKDPA---------YSEVRAILLDPSCSGSGTAAERLDHLLPS-------- 235
HG DF + + A E L+DPSCSGSG A+ H S
Sbjct: 312 HGQDFSDAARRAIAGDTSSTSSLLREASHFLVDPSCSGSGLVAQY--HGSSSGVQTGEEE 369
Query: 236 -HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP 294
H D + + L+A Q K + A+S P E VVYSTCS+HQ ENEDV+ VL
Sbjct: 370 KEEQSHEHDEQDGNNIASLAAEQVKLVLDAMSLPKAEVVVYSTCSVHQEENEDVVAKVLQ 429
Query: 295 IAMSFGFQLATP 306
SF A P
Sbjct: 430 ATRSFKQVAAIP 441
>gi|296133297|ref|YP_003640544.1| sun protein [Thermincola potens JR]
gi|296031875|gb|ADG82643.1| sun protein [Thermincola potens JR]
Length = 451
Score = 111 bits (277), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 93/316 (29%), Positives = 151/316 (47%), Gaps = 25/316 (7%)
Query: 18 WPVGDAE--KFLMLHKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPKPRYVRVNTLK 74
WP DAE ++L +H ++ + + E L A +TP P +R NTLK
Sbjct: 134 WPDKDAEPVEYLSIHYSHPTWMVSLWIEEFGFEETEKLCRANNETP----PNSIRTNTLK 189
Query: 75 MDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL 133
+ D + L G+ +K + P+ + + + G +Q ++S+MV +
Sbjct: 190 ISRDELIGVLAGEGVECRKGEFAPETINISGFKSIASLKSHAQGLYLVQDESSTMVGHIV 249
Query: 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL 193
APKPG KV+DACSAPG KT HLA LM +G+I+A ++++ ++ +K+ G IE
Sbjct: 250 APKPGSKVIDACSAPGGKTTHLAQLMNNQGRILAGDIHQHKMGLIKENCSRLGVNIIEPA 309
Query: 194 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKL 253
D L + +++ +L+D CSG G R P T + R ++L
Sbjct: 310 LVDARELHKEYKEWADF--VLVDAPCSGLGVLRRR-----PELRWRKTVN-----RFDEL 357
Query: 254 SAFQKKALRHA---LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNG 310
+A Q LR A + GV +VYSTC++++ EN D+++S L A F P
Sbjct: 358 TALQLAILRSAAQCVKAGGV--LVYSTCTVNRRENLDLVRSFLENAPEFRLDSLLPLFPD 415
Query: 311 TAEASQFLKALSIYFE 326
T + ++F A Y +
Sbjct: 416 TCDRTKFPTAAEGYIQ 431
>gi|288932240|ref|YP_003436300.1| Fmu (Sun) domain protein [Ferroglobus placidus DSM 10642]
gi|288894488|gb|ADC66025.1| Fmu (Sun) domain protein [Ferroglobus placidus DSM 10642]
Length = 446
Score = 110 bits (276), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 90/280 (32%), Positives = 136/280 (48%), Gaps = 56/280 (20%)
Query: 15 HPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
HP W V AEK + + + +LL+ N +I Y+RVNTLK
Sbjct: 158 HPEWYVKMAEK--------LGIEVEELLIANLENTI----------------YIRVNTLK 193
Query: 75 MDVDSAVLELGKQFVVQKDDLVPDLLIL------PPGCDLHVHPLIVNGCVFLQGKASSM 128
++ L K V+ ++ +P++ + P D H N +Q AS +
Sbjct: 194 TSEENLRRYLEKNDVIVEETFLPEVFKVVSYDKPPAYLDGH------NELFVIQDLASCL 247
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
V+ L P+PG V D C+APG+KT H+AALM+ KGKI+A + +KER+ R++ + G
Sbjct: 248 VSRTLNPEPGDVVADLCAAPGSKTSHMAALMENKGKIIAVDNSKERLERMRARLNKLGVE 307
Query: 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
N+++L GD ++ E +LLDP CS +G+ PS + DP
Sbjct: 308 NVKILLGDASKIE------LEADKVLLDPPCSSTGSVRN-----YPSVKWRY--DP---- 350
Query: 249 RLN-KLSAFQKKALRHALSFPGVERVVYSTCSIHQVENED 287
RL K Q+K L++A + +VYSTCSI ENE+
Sbjct: 351 RLFWKTVELQRKMLKNASKIG--DEIVYSTCSITFEENEE 388
>gi|406910295|gb|EKD50348.1| hypothetical protein ACD_62C00567G0011 [uncultured bacterium]
Length = 323
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 81/244 (33%), Positives = 126/244 (51%), Gaps = 26/244 (10%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIV--NGC 118
PK RVN+LK + + K+ ++ ++D +P L + + L + G
Sbjct: 34 TPKTTACRVNSLKTSAEKVMSFFKKENILFEQDKYLPSCLYIKKLSQKKLVGLRLYQEGE 93
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
++LQ +S + LAPKPG +VLD C++PG+KT +AALM G+GKI+A E ++ R RL
Sbjct: 94 IYLQNPSSQIPPLVLAPKPGERVLDLCASPGSKTTQMAALMSGRGKIIALEPDRIRFERL 153
Query: 179 KDTIKLSGAANIEVLH-------GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
IKL G A++ LH +FL+ ++ + +L+D CSG GT
Sbjct: 154 CHNIKLQGCASVTALHLRAETYLKNFLSASCEE----KFDRVLVDAPCSGEGT------- 202
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
+H +G + R ++ QKK L AL+ PG V YSTCS+ ENE V+
Sbjct: 203 FCINHPAGFSHWSLAFVR--NMAKLQKKLLSLALTLTRPG-GLVCYSTCSLSPEENESVV 259
Query: 290 KSVL 293
++V+
Sbjct: 260 EAVM 263
>gi|388857341|emb|CCF49015.1| uncharacterized protein [Ustilago hordei]
Length = 622
Score = 110 bits (276), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 112/338 (33%), Positives = 150/338 (44%), Gaps = 65/338 (19%)
Query: 27 LMLHKGAIQLALAQLLVRNKVKSIEDLM--ALYQTPDVPKPRYVRVNTLK---------- 74
L +K + L ++ +R+ I DL AL+Q PR++R+NTL+
Sbjct: 138 LERYKACLHSCLVKVQIRSGKSRITDLRSGALFQEMSARIPRWMRINTLRSSATQIHHWL 197
Query: 75 -----MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCD--LHVHPLIVNGCVFLQGKASS 127
+ VD ELG + VP LL P L + V +Q AS
Sbjct: 198 AENRYIKVDGP--ELGGIREYMESPHVPSLLAFHPKATSALLGSEVYKKSWVIMQDLASC 255
Query: 128 MVAAAL-APKPGW-KVLDACSAPGNKTVHLAALM--KG--KGKIVACELNKERVRRLKDT 181
A L A + G V+DA SAPGNKT HL+A+M KG +G++ A E ++ R + L
Sbjct: 256 FPAYILLAEEQGVVDVVDATSAPGNKTCHLSAIMLAKGGNQGRVYAFERDRIRYKTLLKR 315
Query: 182 IKLSGA-ANIEVLHG------------DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+ GA A +E +G DFL P + +S V +L+DPSCSGSG R
Sbjct: 316 LSALGALAEVEKNNGQVQKGNVVAHRKDFLTTKPDE--FSRVTHMLVDPSCSGSGIV-NR 372
Query: 229 LDHLLPSHAS--------------------GHTADPTEMERLNKLSAFQKKALRHALSFP 268
LD L S G T RL LS FQ LRHA FP
Sbjct: 373 LDFLKEDEDSEDPLPPSPSSSTTTTSSAVVGETGTTKLQRRLTSLSDFQLVMLRHAFKFP 432
Query: 269 GVERVVYSTCSIHQVENEDVIKSVLPI--AMSFGFQLA 304
+ ++VYSTCSIH ENE V+ L A G++LA
Sbjct: 433 SLIKLVYSTCSIHAQENESVVLRALDTEEAKRHGWKLA 470
>gi|210622413|ref|ZP_03293145.1| hypothetical protein CLOHIR_01093 [Clostridium hiranonis DSM 13275]
gi|210154229|gb|EEA85235.1| hypothetical protein CLOHIR_01093 [Clostridium hiranonis DSM 13275]
Length = 441
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 84/273 (30%), Positives = 134/273 (49%), Gaps = 25/273 (9%)
Query: 29 LHKGAIQLALAQLLVRNKVKSI------EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVL 82
+ + A++ + Q +V + VK+ E L AL + PD+ YVR NTLK+D +S +
Sbjct: 139 IRRLAVKYSYQQWIVEDWVKNFGIEFAEELLEALNERPDL----YVRTNTLKIDRNSLLK 194
Query: 83 ELGKQFVVQKDDLVPDLLILPPGCD-LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKV 141
E K+ + ++P+ I+ + L G +Q +S +VA +APK G V
Sbjct: 195 EFEKEGIKASKAMLPEEAIMVENFKGIESSRLYKEGLFTVQDISSMLVAKVVAPKEGDMV 254
Query: 142 LDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201
LD CSAPG K+ H+A LMK GKIV+ ++ + +++ +K K G NIE D NLD
Sbjct: 255 LDMCSAPGGKSTHMAELMKNTGKIVSRDVFEHKIKVIKAAAKRLGITNIEAEEFDAANLD 314
Query: 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
+ + + +L D CSG G + + + E L L Q K L
Sbjct: 315 --ENSIEKFDCVLTDVPCSGLGIIRRKPEIKYKAK-----------EELVDLPKIQSKIL 361
Query: 262 RHALSFPGVE-RVVYSTCSIHQVENEDVIKSVL 293
+A + + +VYSTC++ EN +V++ L
Sbjct: 362 ENASKYVKINGTLVYSTCTVQDCENIEVVEKFL 394
>gi|315231384|ref|YP_004071820.1| tRNA/RNA cytosine-C5-methylase [Thermococcus barophilus MP]
gi|315184412|gb|ADT84597.1| tRNA/RNA cytosine-C5-methylase [Thermococcus barophilus MP]
Length = 451
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 84/265 (31%), Positives = 131/265 (49%), Gaps = 24/265 (9%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLH 109
+D + L + + + YVRVN +K D+DS L + V V D+L IL +
Sbjct: 174 DDAIRLLLSNNRAQRYYVRVNPIKTDIDSLADYLEEHNVRVARTPVDDVLKILEYKTPIT 233
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
G +Q AS+ VA L P+ G ++LD +APG+KT H+A LM+ G+I+A +
Sbjct: 234 RLEWYKQGYFVIQDLASAYVAHVLGPEKGERILDLAAAPGSKTFHVAHLMENTGEIIAVD 293
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ ER+ ++++ +K+ G N++++H D + K+ E I+LD CS SGT +
Sbjct: 294 YSLERLNKMREKMKILGVRNVKLVHADGMKFKEKE----EFDRIILDAPCSSSGTYRQ-- 347
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA---LSFPGVERVVYSTCSIHQVENE 286
P + ++ K+ QK LR+A L G + YSTCSI ENE
Sbjct: 348 ---FPE-----VKWRFDERKIKKVIQVQKAMLRNAYRNLRIGG--EMTYSTCSIRIDENE 397
Query: 287 DVIKSVLPIAMSFGFQLA-TPFPNG 310
+ IK + GF+L PF G
Sbjct: 398 ENIKYAMN---KIGFELVDYPFSWG 419
>gi|20095011|ref|NP_614858.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19888274|gb|AAM02788.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 431
Score = 110 bits (275), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 88/257 (34%), Positives = 137/257 (53%), Gaps = 16/257 (6%)
Query: 42 LVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLL 100
LVR+ S+++L + + RYVRVNTL D + V L ++ + ++D VPD+L
Sbjct: 141 LVRSAFDSMDELRKFLEACNRRPARYVRVNTLVSDPEEVVRRLKRRGIEAERDPDVPDVL 200
Query: 101 -ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM 159
I + P G V+ Q KAS+ VA A P+PG V+D C+APG KT HLA LM
Sbjct: 201 RIRSAETPVIKTPEFKKGEVYPQTKASAAVAHAAEPEPGMTVVDLCAAPGGKTTHLAQLM 260
Query: 160 KGKGKIVACELNKERVRRLKDTIKLSGAANI-EVLHGDFLNLDPKDPAYSEVRAILLDPS 218
+G+G+I+A +++ +R LK ++ A +I E L D + P +L+DP
Sbjct: 261 EGRGEIIAIDMHPKRFGTLKKRVRQFHADDIVETLCMDARDA-PDQLGEGIADLVLVDPP 319
Query: 219 CSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYS 276
C+G+G+ + + +G +PT K + Q + L+ A+ PG R+VYS
Sbjct: 320 CTGTGSVYSKPEKRWDRETTG---EPT------KWAQLQWELLKVAVRLLKPG-GRIVYS 369
Query: 277 TCSIHQVENEDVIKSVL 293
TCSI ENE +I+ ++
Sbjct: 370 TCSITLTENERLIERLV 386
>gi|237735904|ref|ZP_04566385.1| SUN protein [Mollicutes bacterium D7]
gi|374626103|ref|ZP_09698517.1| ribosomal RNA small subunit methyltransferase B [Coprobacillus sp.
8_2_54BFAA]
gi|229381649|gb|EEO31740.1| SUN protein [Coprobacillus sp. D7]
gi|373914629|gb|EHQ46444.1| ribosomal RNA small subunit methyltransferase B [Coprobacillus sp.
8_2_54BFAA]
Length = 417
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 97/295 (32%), Positives = 143/295 (48%), Gaps = 45/295 (15%)
Query: 2 EEARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD 61
+E +RI + T+ HPLW V ML K L +A+ + Q +
Sbjct: 132 DELKRISIETS--HPLWIVK------MLSK-QYDLNIAKKIC--------------QHDN 168
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P R RVN LK A L + F V +L PD L+ G ++ NG V +
Sbjct: 169 TPPTRAARVNILK--TTKAQLLTDENFEV--GNLSPDGLLYRAG-NIANTDYFKNGLVTI 223
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q ++S ++A L P+P VLD C APG+KT HLAA+M +GKI+A +L + +++ ++
Sbjct: 224 QDESSQLIAPLLDPQPTDLVLDMCCAPGSKTTHLAAIMNNQGKIIAYDLFEHKIKLVEAN 283
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSE--VRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+K G N+E+ GD L K YSE ILLD CSG G + + + H SG
Sbjct: 284 LKRLGVNNVELHVGDATLLKEK---YSEESFDKILLDAPCSGLGVMKRKPE--IKYHDSG 338
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVL 293
++ + Q K L +A ++VYSTC+I++ ENE +IK L
Sbjct: 339 A---------MDTIIPLQAKLLDNAYYLLKKNGKMVYSTCTINKKENEQMIKQFL 384
>gi|154289963|ref|XP_001545584.1| hypothetical protein BC1G_15882 [Botryotinia fuckeliana B05.10]
Length = 632
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/230 (33%), Positives = 110/230 (47%), Gaps = 38/230 (16%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT--------PDVPKPRYVRVNTLKMDVDS-- 79
HKG +Q L + +R K+ ++E L A +T + P PR++R+NTLK ++
Sbjct: 102 HKGRLQAELTKARLRRKMSTMEALKAYVETGQENATDTSEAPYPRWIRINTLKTTLEDQL 161
Query: 80 --------------AVLELG-KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
AV G K+ + D +P+L+ + P DL +G + Q K
Sbjct: 162 ESTFTGFERAATIDAVRHRGSKRLYI--DVHIPNLIAISPNIDLSKSVAYKSGEIIFQDK 219
Query: 125 ASSMVAAALAP-KPGWKVLDACSAPGNKTVHLAALM--------KGKGKIVACELNKERV 175
AS A L P ++D+CSAPGNKT H+ A++ + I A E NK R
Sbjct: 220 ASCFPAYLLDPLAEDGDIIDSCSAPGNKTTHIGAILVDRLPEPDESTQVIHAFEKNKGRA 279
Query: 176 RRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSG 223
L+ + L+G+ LH DFL DP Y V A+LLDPSCSGSG
Sbjct: 280 ETLEKMVNLAGSNTFTALHAGYDFLKTDPNSGTYKNVGALLLDPSCSGSG 329
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 34/57 (59%), Gaps = 2/57 (3%)
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
RL L+ FQ + L HA +P ++ YSTCSIH ENE V++ L IA G+++
Sbjct: 407 RLTALAEFQLELLLHAFKYPAARKITYSTCSIHAEENESVVQKALASDIAKEKGWKI 463
>gi|390960865|ref|YP_006424699.1| hypothetical protein containing sun-domain [Thermococcus sp. CL1]
gi|390519173|gb|AFL94905.1| hypothetical protein containing sun-domain [Thermococcus sp. CL1]
Length = 451
Score = 109 bits (273), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 90/292 (30%), Positives = 143/292 (48%), Gaps = 38/292 (13%)
Query: 1 MEEARRI-GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQT 59
++E RI L HP W V A + L+ + A++L LL N+
Sbjct: 144 LKERDRIEWLSIRFSHPRWYVEYAIE-LLGYDEAVRL----LLSNNR------------- 185
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGC 118
P+ YVR N LK DVDS L + V VPD+L +L + G
Sbjct: 186 ---PQRYYVRANLLKTDVDSLRDYLEENGVRTARTPVPDVLKVLDYKTPVTRLNWYREGK 242
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+Q AS+ VA LAP+PG +VLD +APG+KT H AALM+ +G+IVA + + +R+ R+
Sbjct: 243 FVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENRGEIVAVDYSYDRLMRM 302
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
++ +KL G N++++H D + ++ + I+LD CS SGT + P
Sbjct: 303 REKMKLLGIKNVKLVHADGQSFKDRE----KFDKIILDAPCSSSGTYRQ-----FPEVKW 353
Query: 239 GHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVI 289
E++ ++ + Q+ LR+A + + YSTCS+ E+E+ +
Sbjct: 354 RFNE-----EKIKRIISVQRNMLRNAYENLRDGGEMTYSTCSVRIDEDEENV 400
>gi|169831743|ref|YP_001717725.1| sun protein [Candidatus Desulforudis audaxviator MP104C]
gi|169638587|gb|ACA60093.1| sun protein [Candidatus Desulforudis audaxviator MP104C]
Length = 452
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/276 (29%), Positives = 133/276 (48%), Gaps = 13/276 (4%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLH 109
E+ +AL Q + P +RVNTL++D DS + L ++ V+K P+ L + +
Sbjct: 168 EETIALCQANNTIPPNTIRVNTLRVDRDSLAVRLEQEGLTVRKTRFAPEGLEIGGFVSMR 227
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
P G +Q ++S +VA A+ P G ++LDACSAPG KT HLA LM+ +G I A +
Sbjct: 228 ALPSFQQGLFQIQDESSMLVAHAVNPARGVRILDACSAPGGKTTHLAQLMENEGIIKALD 287
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+++ +++ + D + G N+E D +L + +++ +L+D CSG G R
Sbjct: 288 IHQHKLKLVSDNCRRLGIDNVETELLDARDLPGEFEGWADF--VLVDAPCSGLGVLRRRP 345
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
D + +P ++ L +L + GV +VYSTC+I EN +
Sbjct: 346 D-------ARWRKEPGQITGLVRLQEAILAGAAQCVRAGGV--LVYSTCTITYEENLGQV 396
Query: 290 KSVLPIAMSFGFQLATPF-PNGTAEASQFLKALSIY 324
+S L F + PF P G E L I+
Sbjct: 397 QSFLAHHPDFLLENLRPFLPAGLGEEQMARGYLEIF 432
>gi|167757026|ref|ZP_02429153.1| hypothetical protein CLORAM_02575 [Clostridium ramosum DSM 1402]
gi|167703201|gb|EDS17780.1| ribosomal RNA small subunit methyltransferase B [Clostridium
ramosum DSM 1402]
Length = 417
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 96/295 (32%), Positives = 143/295 (48%), Gaps = 45/295 (15%)
Query: 2 EEARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD 61
+E +RI + T+ HPLW V ML K L +A+ + Q +
Sbjct: 132 DELKRISIETS--HPLWIVK------MLSK-QYDLNIAKKIC--------------QHDN 168
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P R RVN LK A L + F + +L PD L+ G ++ NG V +
Sbjct: 169 TPPTRAARVNILK--TTKAQLLTDENF--EAGNLSPDGLLYRAG-NIANTDYFKNGLVTI 223
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q ++S ++A L P+P VLD C APG+KT HLAA+M +GKI+A +L + +++ ++
Sbjct: 224 QDESSQLIAPLLDPQPTDLVLDMCCAPGSKTTHLAAIMNNQGKIIAYDLFEHKIKLVEAN 283
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSE--VRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+K G N+E+ GD L K YSE ILLD CSG G + + + H SG
Sbjct: 284 LKRLGVNNVELHVGDATLLKEK---YSEESFDKILLDAPCSGLGVMKRKPE--IKYHDSG 338
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVL 293
++ + Q K L +A ++VYSTC+I++ ENE +IK L
Sbjct: 339 A---------MDTIIPLQAKLLDNAYYLLKKNGKMVYSTCTINKKENEQMIKQFL 384
>gi|212225119|ref|YP_002308355.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus onnurineus NA1]
gi|212010076|gb|ACJ17458.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus onnurineus NA1]
Length = 450
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 101/314 (32%), Positives = 150/314 (47%), Gaps = 42/314 (13%)
Query: 1 MEEARRI-GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQT 59
++E RI L HP W V A + L + A++L LL NK +
Sbjct: 144 LKERDRIEWLSVRFSHPRWYVEYAVE-LFGYDEAVRL----LLSNNKAQRY--------- 189
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGC 118
YVR NTLK DVDS L + V +PD+L IL + G
Sbjct: 190 -------YVRANTLKTDVDSLRDYLEENGVRTALTPLPDVLKILEYKTPVTRLNWYKQGK 242
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+Q AS+ VA LAP+PG +VLD +APG+KT H AALM+ KG+IVA + + +R+ R+
Sbjct: 243 FVIQDLASAYVAHVLAPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRLMRM 302
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
K+ +KL G N++++H D + K+ + I+LD CS SGT + P
Sbjct: 303 KEKMKLLGIKNVKLVHADGQSFRDKE----KFDKIILDAPCSSSGTYRQ-----FPE--- 350
Query: 239 GHTADPTEMERLNKLSAFQKKALRHA-LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
+ +++ ++ Q+ LR+A + + YSTCSI E+E+ +VL
Sbjct: 351 --VKWRFDEKKIKRIINVQRNMLRNAHENLRDGGEMTYSTCSIRIDEDEE---NVLFAIN 405
Query: 298 SFGFQLAT-PFPNG 310
G +L PF G
Sbjct: 406 RVGLELIDYPFSWG 419
>gi|14521110|ref|NP_126585.1| sun protein (fmu protein) [Pyrococcus abyssi GE5]
gi|5458327|emb|CAB49816.1| Sun/NOL1/NOP nucleolar protein [Pyrococcus abyssi GE5]
gi|380741676|tpe|CCE70310.1| TPA: sun protein (fmu protein) [Pyrococcus abyssi GE5]
Length = 450
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/254 (32%), Positives = 127/254 (50%), Gaps = 27/254 (10%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFV----VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P+ YVRVNTLK D+D L + V DD++ L P L H G
Sbjct: 186 PQRYYVRVNTLKADIDKVRRYLEENGVRVALTPVDDVLKVLDYEKPVTRLEWHR---KGY 242
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+Q AS+ VA L P+PG +VLD +APG+KT H AALM+ KG+IVA + + +R+ ++
Sbjct: 243 FVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRLMKM 302
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
K+ +K G N++++H D + ++ I+LD CS SGT + P
Sbjct: 303 KERMKRLGVKNVKLVHADGQSFIDREG----FEKIILDAPCSSSGTYRQ-----FPE--- 350
Query: 239 GHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
+ E++ ++ + Q+ L +A + + YSTCSI ENE+ + A+
Sbjct: 351 --VKWRFDEEKIKRVISVQRNMLLNAYRNLRSGGEMTYSTCSIRIDENEENV----IFAL 404
Query: 298 SFGFQLAT-PFPNG 310
GF++ PF G
Sbjct: 405 EKGFEIVDYPFEWG 418
>gi|429965057|gb|ELA47054.1| hypothetical protein VCUG_01415 [Vavraia culicis 'floridensis']
Length = 403
Score = 109 bits (272), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 116/239 (48%), Gaps = 27/239 (11%)
Query: 55 ALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLI 114
A ++ D+ R + V+ ++ D A L +Q + +P + +P L + P
Sbjct: 136 AGHKNNDLEADRRLHVHGYILNKDQANLIKSRQL---RPTAIPFVYEVPLSTHLRLSPA- 191
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
+Q +++ L P V+D C++PGNKT HL+A+M G I A E + R
Sbjct: 192 --RHYIIQSLPTTLPPCILNPPFHSTVIDTCASPGNKTSHLSAIMNNTGLIYAVEKDTNR 249
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
+ L+ ++L A N+ L+ DFL L +L+DPSCSGSG +
Sbjct: 250 YKTLQRNLQLCNAKNVTALNSDFLELKL------SAEYLLVDPSCSGSGIHND------- 296
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ +P R+ LS+FQKK L HALS ER+VYSTCS H+ ENE V+ V
Sbjct: 297 -----YVKNPG---RVKLLSSFQKKILLHALSTENAERIVYSTCSSHEEENEMVVDYVF 347
>gi|365830316|ref|ZP_09371898.1| ribosomal RNA small subunit methyltransferase B [Coprobacillus sp.
3_3_56FAA]
gi|365263497|gb|EHM93327.1| ribosomal RNA small subunit methyltransferase B [Coprobacillus sp.
3_3_56FAA]
Length = 417
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 95/295 (32%), Positives = 143/295 (48%), Gaps = 45/295 (15%)
Query: 2 EEARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD 61
+E +RI + T+ HPLW V ML K L +A+ + Q +
Sbjct: 132 DELKRISIETS--HPLWIVK------MLSK-QYDLNIAKKIC--------------QHDN 168
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P R RVN LK A L + F + +L PD L+ G ++ NG V +
Sbjct: 169 TPPTRAARVNILK--TTKAQLLTDENF--EAGNLSPDGLLYRAG-NIANTDYFKNGLVTI 223
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q ++S ++A L P+P VLD C APG+KT HLAA+M +GKI+A +L + +++ ++
Sbjct: 224 QDESSQLIAPLLDPQPTDLVLDMCCAPGSKTTHLAAIMNNQGKIIAYDLFEHKIKLVEAN 283
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSE--VRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+K G N+E+ GD L K YSE ILLD CSG G + + + H SG
Sbjct: 284 LKRLGVNNVELHVGDATLLKEK---YSEESFDKILLDAPCSGLGVMKRKPE--IKYHDSG 338
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVL 293
++ + Q K L +A +++YSTC+I++ ENE +IK L
Sbjct: 339 A---------MDTIIPLQAKLLDNAYYLLKKNGKMIYSTCTINKKENEQMIKQFL 384
>gi|389852209|ref|YP_006354443.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus sp. ST04]
gi|388249515|gb|AFK22368.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus sp. ST04]
Length = 451
Score = 108 bits (271), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 16/252 (6%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNTLK DV+ + E + + V++ + P ++ + D L G + +Q +AS
Sbjct: 190 VRVNTLKADVEDVIKEFEDEGIEVRRSERAPTVVKIKGPYDFDSSDLFRKGKIIVQEEAS 249
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
++ + L PKPG V+D +APG KT H+A LM KGKI A +++K R++RLK+ G
Sbjct: 250 AVASLILDPKPGEIVVDLAAAPGGKTTHMAELMNNKGKIYAFDIDKARMKRLKEFASRMG 309
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
I+ + D P+ +LLD C+ SGT + + S
Sbjct: 310 IKIIKPIIKDARKA-PEIVGEEIADKVLLDAPCTSSGTIGKNPELRWRLRES-------- 360
Query: 247 MERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-QL 303
++ ++++ Q++ L A L PG R++Y+TCSI E+ED +K L +F +L
Sbjct: 361 --KIEEMASLQRELLESAARLVRPG-GRLLYTTCSIFTEEDEDNVKWFLETHKNFKLVKL 417
Query: 304 ATPFPNGTAEAS 315
++P+ G E +
Sbjct: 418 SSPYSPGFLEGT 429
>gi|337283536|ref|YP_004623010.1| sun protein (fmu protein) [Pyrococcus yayanosii CH1]
gi|334899470|gb|AEH23738.1| sun protein (fmu protein) [Pyrococcus yayanosii CH1]
Length = 450
Score = 108 bits (270), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 87/255 (34%), Positives = 127/255 (49%), Gaps = 29/255 (11%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFV----VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P+ Y+RVNTLK DVD L + V DD++ L P L + G
Sbjct: 186 PQRYYIRVNTLKADVDKVKKYLEENGVRVAYTPVDDVLKVLDYETPVTRLEWYK---RGY 242
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+Q AS+ VA L P+PG +VLD +APG+KT H AALM+ KG+IVA + + ER+ ++
Sbjct: 243 FVIQDLASAYVAHVLKPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYERLIKM 302
Query: 179 KDTIKLSGAANIEVLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
K+ +K G N+ ++H D N D +D I+LD CS SGT + P
Sbjct: 303 KERMKRLGVKNVRLVHADGQNFKDERD-----FDKIILDAPCSSSGTYRQ-----FPEVK 352
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
+ ++ ++ + Q+ L +A + + YSTCSI ENE+ +VL A
Sbjct: 353 WRFDEN-----KIKRVISVQRNMLLNAYENLRADGEMTYSTCSIRIDENEE---NVL-FA 403
Query: 297 MSFGFQLAT-PFPNG 310
+ GF L PF G
Sbjct: 404 LERGFALIKHPFNWG 418
>gi|402072439|gb|EJT68236.1| hypothetical protein GGTG_14186 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 557
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 84/228 (36%), Positives = 114/228 (50%), Gaps = 37/228 (16%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQ---TPDVPKPRYVRVNTLKMDVDSAVLELGK 86
HK + L + +R K S++ L A +PD PR++R+NTLK + EL
Sbjct: 100 HKARLTAELTRARIRRKAPSLDALRAEVDEAASPDAGHPRWIRINTLKTSI---ATELES 156
Query: 87 QFV-VQKDDLVPDLLIL--PPGC--DLHVHPLIV--------------NGCVFLQGKASS 127
F K +PDLL P G D H+ LI +G + LQ KAS
Sbjct: 157 TFAGFTKVASIPDLLARSKPDGIYMDEHIPNLIAVSRRVDMIKKEAYKSGAIILQDKASC 216
Query: 128 MVAAALAPKP-GWKVLDACSAPGNKTVHLAALMK---------GKGKIVACELNKERVRR 177
A L P+P +V+DAC+APGNKT HLAA++K G +I A E + R
Sbjct: 217 FPAYLLDPRPEDGEVVDACAAPGNKTTHLAAVLKSRRAASGFAGPLRIHAFEKDPVRAMT 276
Query: 178 LKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSG 223
L+ +KL+G+ L+ DFL +P D Y+ V A+LLDPSCSGSG
Sbjct: 277 LEKMVKLAGSDGFTCLNKGKDFLKANPDDALYANVGALLLDPSCSGSG 324
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 36/59 (61%), Gaps = 2/59 (3%)
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL--PIAMSFGFQLAT 305
RL LS+FQ L HAL FP RV YSTCS+H ENE V+ + L +A G+++ T
Sbjct: 404 RLAALSSFQCSLLVHALGFPVARRVTYSTCSVHAEENEHVVLAALRSEVARERGWRILT 462
>gi|57642239|ref|YP_184717.1| tRNA/rRNA cytosine-C5-methylase NOL1/NOP2/Sun family protein
[Thermococcus kodakarensis KOD1]
gi|57160563|dbj|BAD86493.1| tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family, fused to
N-terminal NusB regulator domain [Thermococcus
kodakarensis KOD1]
Length = 450
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 85/252 (33%), Positives = 127/252 (50%), Gaps = 22/252 (8%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFL 121
P+ YVR NTLK D+DS L + V VPD+L +L + G +
Sbjct: 186 PQRYYVRANTLKTDIDSLRDYLEENGVRTALTPVPDVLKVLEYKTPVTRLDWYKEGKFVI 245
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q AS+ VA L+P+PG ++LD +APG+KT H AALM+ KG+IVA + + +R+ R+K+
Sbjct: 246 QDLASAYVAHVLSPEPGERLLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRLMRMKEK 305
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
K+ G N+ +H D + K+ + I+LD CS SGT + P
Sbjct: 306 AKVLGVKNVRFVHADGQSFRDKE----KFDKIILDAPCSSSGTYRQ-----FPE-----V 351
Query: 242 ADPTEMERLNKLSAFQKKALRHALS--FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
+ ++ K+ + Q+ LR+A G E + YSTCSI E+E+ +VL
Sbjct: 352 KWRFDEAKIKKIISVQRNMLRNAYENLREGGE-MTYSTCSIRIDEDEE---NVLFAINRV 407
Query: 300 GFQ-LATPFPNG 310
G + L PF G
Sbjct: 408 GLELLDYPFSWG 419
>gi|169349816|ref|ZP_02866754.1| hypothetical protein CLOSPI_00554 [Clostridium spiroforme DSM 1552]
gi|169293384|gb|EDS75517.1| ribosomal RNA small subunit methyltransferase B [Clostridium
spiroforme DSM 1552]
Length = 481
Score = 108 bits (269), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 80/236 (33%), Positives = 121/236 (51%), Gaps = 22/236 (9%)
Query: 61 DVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+ P R RVNTLK + ++ L K+ + +L PD L+ G ++ G V
Sbjct: 232 NTPPGRTARVNTLKTNKNT----LLKEGCFENGNLAPDALLYNAG-NIAESTYFKEGLVT 286
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA L+P VLD C APG+KT HLAALM KGKI+AC+L + +++ +K+
Sbjct: 287 IQDESSQLVAPLLSPSEDDLVLDMCCAPGSKTTHLAALMNNKGKIIACDLFEHKIKLVKE 346
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSE--VRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+K +N+E+ D L K Y E ILLD CSG G + + + H S
Sbjct: 347 NLKRLNISNVELHAIDATTLKEK---YLEGTFDKILLDAPCSGLGVMKRKPE--IKYHDS 401
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENEDVIKSVL 293
++ + Q K L +A ++VYSTC+I++ ENE +IK L
Sbjct: 402 S---------VMDTIIPLQAKLLDNAYYLLKNNGKMVYSTCTINKKENEQMIKKFL 448
>gi|240103511|ref|YP_002959820.1| SAM-dependent tRNA/rRNA cytosine-C5 methylase [Thermococcus
gammatolerans EJ3]
gi|239911065|gb|ACS33956.1| SAM-dependent tRNA/rRNA cytosine-C5 methylase [Thermococcus
gammatolerans EJ3]
Length = 451
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 83/250 (33%), Positives = 128/250 (51%), Gaps = 28/250 (11%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFL 121
P+ YVR NTLK D+DS L + V VPD+L +L + G +
Sbjct: 186 PQRYYVRANTLKTDMDSLRDYLEENGVRTALTPVPDVLKVLDYKTPVTRLDWYKEGKFVI 245
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q AS+ VA L P+PG +VLD +APG+KT H A+LM+ KG+IVA + + +R+ R+K+
Sbjct: 246 QDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAASLMENKGEIVAVDYSYDRLMRMKEK 305
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
+K+ G N++++H D + K ++ I+LD CS SGT + P
Sbjct: 306 MKILGIKNVKLVHADGQSFRDK----AKFDRIILDAPCSSSGTYRQ-----FP-----EV 351
Query: 242 ADPTEMERLNKLSAFQKKALRHA---LSFPGVERVVYSTCSIHQVENED--------VIK 290
+ ++ ++ + Q+ LR+A L GV + YSTCSI E+E+ V
Sbjct: 352 KWRFDERKIKRIISVQRNMLRNAYENLRDGGV--MTYSTCSIRIDEDEENVLFAVEKVGL 409
Query: 291 SVLPIAMSFG 300
+LP S+G
Sbjct: 410 ELLPYDFSWG 419
>gi|14590913|ref|NP_142986.1| fmu protein [Pyrococcus horikoshii OT3]
gi|3257494|dbj|BAA30177.1| 450aa long hypothetical fmu protein [Pyrococcus horikoshii OT3]
Length = 450
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 96/317 (30%), Positives = 150/317 (47%), Gaps = 49/317 (15%)
Query: 1 MEEARRI-GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQT 59
++E RI L HP W V K L+ + ++L L+ L
Sbjct: 144 LKERDRIEWLSVRFSHPRWYVEYVVK-LLGYDETVRLLLSNLR----------------- 185
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQK----DDLVPDLLILPPGCDLHVHPLIV 115
P+ Y+RVNTLK+DVD L + V DD++ L P L +
Sbjct: 186 ---PQRYYIRVNTLKVDVDRVKRYLEENGVRVSLTPVDDVLKVLEYEKPVTKLEWYR--- 239
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 175
G +Q AS+ VA L P+PG +VLD +APG+KT H AALM+ +G+IVA + + +R+
Sbjct: 240 KGYFVIQDLASAYVAHVLNPEPGERVLDLAAAPGSKTFHAAALMENRGEIVAVDYSYDRL 299
Query: 176 RRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
++++ +K G N++++H D + K+ + I+LD CS SGT + P
Sbjct: 300 IKMRERMKKLGVKNVKLVHADGQSYTEKE----KFDKIILDAPCSSSGTYRQ-----FPE 350
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVIKSVLP 294
E++ ++ + Q+ L +A + G + YSTCSI ENE ++VL
Sbjct: 351 VKWRFNE-----EKIKRVISVQRNMLINAYRNLAGGGEMTYSTCSIRIDENE---QNVL- 401
Query: 295 IAMSFGFQLA-TPFPNG 310
A+ G +L PF G
Sbjct: 402 FAIEKGLELVDYPFEWG 418
>gi|298492855|ref|YP_003723032.1| sun protein ['Nostoc azollae' 0708]
gi|298234773|gb|ADI65909.1| sun protein ['Nostoc azollae' 0708]
Length = 446
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 94/297 (31%), Positives = 148/297 (49%), Gaps = 34/297 (11%)
Query: 19 PVGDAEKFLMLHK---GAIQLALAQLLVRNKVKSIEDLMA-LYQTPDVPKPRYVRVNTLK 74
P E+ +LH I++ L QL +K E L A + +TP + +RVN L+
Sbjct: 138 PENPVERLGILHSFPDWIIEVWLEQL----GLKETERLCAWMNKTPTID----LRVNILR 189
Query: 75 MD---VDSAVLELGKQFVVQKDDLVPD-LLILPPGCDLHVHPLIVNGCVFLQGKASSMVA 130
V+SA G +V+ +P L ++ + P G +Q ++ +V+
Sbjct: 190 SSLEKVESAFKSAG--VLVRPIPYLPQGLRLISSTGPIKNLPGFREGWWTVQDSSAQLVS 247
Query: 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190
L PKPG V+D C+APG KT H+ LM KGKI AC+ R+RRLK+ ++ +I
Sbjct: 248 HLLDPKPGNVVIDVCAAPGGKTTHIGELMGDKGKIWACDQTASRLRRLKENVQRLHLESI 307
Query: 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
E+ GD NL + + +LLD CSG GT D + P+ ++ L
Sbjct: 308 EICTGDSRNLTQFN---NIADCVLLDAPCSGLGTMHRHAD-------ARWRQTPSSVQEL 357
Query: 251 NKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVIKSVLPIAMSFGFQLATP 306
++L QK+ + H +F V V VY+TC++H +ENE+VI L A++ +Q+ +P
Sbjct: 358 SQL---QKELISHTANFIKVGGVLVYATCTLHPMENEEVISQFL--AVNPHWQIESP 409
>gi|336266236|ref|XP_003347887.1| hypothetical protein SMAC_06719 [Sordaria macrospora k-hell]
gi|380091820|emb|CCC10548.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 729
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 110/399 (27%), Positives = 161/399 (40%), Gaps = 126/399 (31%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDL---MALYQTPDVP-KPRYVRVNTLKMDVD------- 78
HK + + +R K S++ L + + P PR++RVNTLK V+
Sbjct: 107 HKARLNSEFVRARIRRKCTSLDALRTQVEIEARGGCPVHPRWIRVNTLKSTVEEQLATTF 166
Query: 79 ---------SAVLELGKQF----------------VVQKDDLVPDLLILPPG-CDLHVHP 112
+ V++ F V+ D +P+L+ PG D
Sbjct: 167 KGWEVVETVADVIKAADAFGSSSSSSQQGGKRGKKVIHIDGHIPNLIAACPGVADFTKTE 226
Query: 113 LIVNGCVFLQGKASSMVAAALAPKP--GWKVLDACSAPGNKTVHLAALMKGK---GK--- 164
+G + LQ KAS A L P+P V+D C+APGNKT HLAA++ + GK
Sbjct: 227 AYKSGKIILQDKASCFPAYLLDPRPERDGDVMDTCAAPGNKTTHLAAIVASRVEDGKAVV 286
Query: 165 -----------------------------IVACELNKERVRRLKDTIKLSGAANIEVLHG 195
I A E + R + L+ +K +G+ V++
Sbjct: 287 FDGSSKTSKKGKGKKKNDKAETTTTTPTTIYAFEKDPHRAKTLQKMVKTAGSDTFTVVNA 346
Query: 196 --DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD----HL---------------LP 234
DFL ++P D Y V A+LLDPSCSGSG R D HL P
Sbjct: 347 GKDFLKVNPLDTKYRNVGALLLDPSCSGSGIVG-RDDAPTLHLPSGPSSSSSSSSSGPTP 405
Query: 235 SHASG------------HTADPTEME----------------RLNKLSAFQKKALRHALS 266
+ +G T + E E R+ L++FQ L+HA+S
Sbjct: 406 ASKTGPKGKANNKRKQPPTTETKEEEPPIKKVLIDDDGPLEARIASLASFQLVLLQHAMS 465
Query: 267 FPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
FP +R+ YSTCSIH ENE V+ L +A G+++
Sbjct: 466 FPAAKRITYSTCSIHAGENEHVVLRALASDVARRRGWKI 504
>gi|342214380|ref|ZP_08707078.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
oral taxon 780 str. F0422]
gi|341593929|gb|EGS36741.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
oral taxon 780 str. F0422]
Length = 452
Score = 107 bits (267), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 126/250 (50%), Gaps = 17/250 (6%)
Query: 69 RVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPP-GCDLHVHPLIVNGCVFLQGKAS 126
RVNTL++ + EL + +VV+ ++PD +I+ L + G + +AS
Sbjct: 191 RVNTLRISRHDLLEELSQANWVVEPSHMIPDAIIIKSHKGQLQEAKWVQEGLMTFMDEAS 250
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
VA A+ PK +LD C+APG KT+H+A LM G IVA ++++ +V L+ K
Sbjct: 251 MAVAYAVQPKQHMHILDTCAAPGGKTLHMATLMDNTGTIVATDIHEHKVELLQANAKRMK 310
Query: 187 AANIEVLHGDFLNLDPKDPAYSE-VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
+N++ GD K+ + E A+L+D CSG G ++LD S
Sbjct: 311 ISNVQPQQGD---ATVKEEQWKESFDAVLVDAPCSGLGILQKKLDMRWRKEES------- 360
Query: 246 EMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
+L +L QK+ L++A S+ V +VYSTC+I+ +ENE V+++ L +F +
Sbjct: 361 ---QLQELPMLQKQILQNASSYVKVGGYLVYSTCTINTLENEGVVENFLRENPNFILEDV 417
Query: 305 TPFPNGTAEA 314
P AE
Sbjct: 418 APLLPFAAEG 427
>gi|392388960|ref|YP_005907369.1| Sun family protein [Mycoplasma leachii 99/014/6]
gi|339276605|emb|CBV67184.1| Sun family protein [Mycoplasma leachii 99/014/6]
Length = 424
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 28/270 (10%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ 87
+LH + +L L +L++ K I + + + +PK Y+R+NTLK+ D +
Sbjct: 142 ILHSFSYELYL--MLIKQYDKDIVNQIVV-NNQQIPKL-YIRINTLKITSDQLFNKYKDI 197
Query: 88 FVVQKDDLVPDLLILPP---GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
++++K + V D LI DL+ NG + +Q KAS +V+ L P KVLD
Sbjct: 198 YLLEKTN-VNDCLIANKTIINSDLYK-----NGFITIQDKASILVSQILNPSLNAKVLDI 251
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
CSAPG K HL+ ++K G I+A E+N+ +++ +++ I NI V++ D + K
Sbjct: 252 CSAPGGKLTHLSMILKNTGNIIANEINESKIKLIRENINRLNCLNISVINMDARKIKQK- 310
Query: 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 264
E ILLD CSG G + + L D T+ LN + Q++ L A
Sbjct: 311 ---QEFDYILLDAPCSGFGVFKRKPEIKLR-------FDQTQ---LNNIINLQEELLESA 357
Query: 265 -LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ +VYSTC+I+Q EN++ I L
Sbjct: 358 YYNLKNNGEMVYSTCTINQDENQNQITKFL 387
>gi|75910625|ref|YP_324921.1| rRNA SAM-dependent methyltransferase [Anabaena variabilis ATCC
29413]
gi|75704350|gb|ABA24026.1| Fmu, rRNA SAM-dependent methyltransferase [Anabaena variabilis ATCC
29413]
Length = 449
Score = 107 bits (267), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 105/199 (52%), Gaps = 16/199 (8%)
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
P G +Q ++ +V+ L P+PG ++DAC+APG KT H+A LMK +GK+ A +
Sbjct: 229 PGFSQGWWVVQDASAQLVSHLLDPQPGEVIIDACAAPGGKTTHIAELMKDQGKVWAGDRT 288
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
R+R+LK+ + +IE+ GD NL P+ Y+ +LLD CSG GT
Sbjct: 289 ASRLRKLKENAQRLNLHSIEICTGDSRNL-PQ--FYNVADRVLLDAPCSGLGT------- 338
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVIK 290
L HA E + +LS Q++ L H F V V VY+TC++H ENE+VI
Sbjct: 339 -LHRHADARWRQTP--ESVQELSTLQQELLSHTSKFVKVGGVLVYATCTLHPAENEEVIT 395
Query: 291 SVLPIAMSFGFQLATPFPN 309
+ A + +Q+ P P+
Sbjct: 396 EFM--ARNSDWQIEPPSPD 412
>gi|313665137|ref|YP_004047008.1| ribosomal RNA small subunit methyltransferase B [Mycoplasma leachii
PG50]
gi|312949207|gb|ADR23803.1| ribosomal RNA small subunit methyltransferase B [Mycoplasma leachii
PG50]
Length = 423
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 28/270 (10%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ 87
+LH + +L L +L++ K I + + + +PK Y+R+NTLK+ D +
Sbjct: 141 ILHSFSYELYL--MLIKQYDKDIVNQIVV-NNQQIPKL-YIRINTLKITSDQLFNKYKDI 196
Query: 88 FVVQKDDLVPDLLILPP---GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
++++K + V D LI DL+ NG + +Q KAS +V+ L P KVLD
Sbjct: 197 YLLEKTN-VNDCLIANKTIINSDLYK-----NGFITIQDKASILVSQILNPSLNAKVLDI 250
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
CSAPG K HL+ ++K G I+A E+N+ +++ +++ I NI V++ D + K
Sbjct: 251 CSAPGGKLTHLSMILKNTGNIIANEINESKIKLIRENINRLNCLNISVINMDARKIKQK- 309
Query: 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 264
E ILLD CSG G + + L D T+ LN + Q++ L A
Sbjct: 310 ---QEFDYILLDAPCSGFGVFKRKPEIKLR-------FDQTQ---LNNIINLQEELLESA 356
Query: 265 -LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ +VYSTC+I+Q EN++ I L
Sbjct: 357 YYNLKNNGEMVYSTCTINQDENQNQITKFL 386
>gi|416350348|ref|ZP_11680855.1| 16S rRNA methyltransferase B [Clostridium botulinum C str.
Stockholm]
gi|338196305|gb|EGO88506.1| 16S rRNA methyltransferase B [Clostridium botulinum C str.
Stockholm]
Length = 443
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 121/224 (54%), Gaps = 14/224 (6%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVN LK D D A +L + + +++ + P+ +I+ G + +PL +G V +Q +++
Sbjct: 181 VRVNNLKTDYDEAFNKLEEYGYSIEEGYVCPEAIIINKGKSIESNPLFEDGKVTVQDESA 240
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VAA + K G VLD CSAPG KT H++ +M GK++A ++++ ++ +KD K G
Sbjct: 241 MLVAATMDIKEGSLVLDLCSAPGGKTTHISEIMNNTGKVMAFDIHENKLSLVKDNAKRLG 300
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
NIE D + K ++ A+L+D CSG G ++ + +
Sbjct: 301 INNIECSKLDASKFNEKLKETAD--AVLIDVPCSGLGIIRKKPEIKYTKN---------- 348
Query: 247 MERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVI 289
ME + + QK+ +++A + V ++YSTC+I++ ENE I
Sbjct: 349 MESVKDIVNIQKEIMKNAARYVKVGGTLLYSTCTINKKENEQNI 392
>gi|21552772|gb|AAM62319.1|AF416611_1 Williams-Beuren Syndrome critical region protein 20 copy C [Homo
sapiens]
Length = 291
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/198 (34%), Positives = 95/198 (47%), Gaps = 32/198 (16%)
Query: 96 VPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
+P+LL+ P DLH HPL G + LQ +AS + A L P+ KT HL
Sbjct: 1 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
AAL+K +GKI A +L+ R+ + + +G + E+ DFL + P DP Y EV +LL
Sbjct: 61 AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
DPSCSGSG + +L+ T P R+VY
Sbjct: 121 DPSCSGSGMPSRQLE-----EPGAGTPSP---------------------------RLVY 148
Query: 276 STCSIHQVENEDVIKSVL 293
S CS+ Q ENED+++ L
Sbjct: 149 SMCSLCQEENEDMVQDAL 166
>gi|392394789|ref|YP_006431391.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfitobacterium dehalogenans ATCC 51507]
gi|390525867|gb|AFM01598.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfitobacterium dehalogenans ATCC 51507]
Length = 453
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 93/302 (30%), Positives = 142/302 (47%), Gaps = 32/302 (10%)
Query: 18 WPVGDAE--KFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM 75
WP + E ++L L + + + L R + D AL Q + P P ++R NTLK+
Sbjct: 134 WPSKEREPIRYLSLRYSHPEWMVKRWLKRY---GMTDTEALCQANNEPAPVWIRTNTLKI 190
Query: 76 DVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALA 134
+ L ++ V V + VP+ L++ L P G +Q ++S ++A L
Sbjct: 191 SREGLQERLEREGVKVTLGERVPESLVIEEFGSLDKLPSFQEGLFTVQDESSQLIAHVLN 250
Query: 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 194
P+ G KVLDAC APG KT HLA M+ +G+I+A +++ +V+ ++D LS I ++H
Sbjct: 251 PQAGQKVLDACGAPGGKTTHLAQRMENRGEILAFDIHPHKVKLIED---LSARLGITIIH 307
Query: 195 ---GDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
GD L +D +Y +V L+D CSG G R D E E +
Sbjct: 308 PQAGDARELAGVEDSSYHKV---LVDAPCSGLGVIRRRADMRWNK----------EEEEI 354
Query: 251 NKLSAFQKKALRHA---LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG-FQLATP 306
L Q L A ++ G +VYSTC+I EN +V+K+ F LA
Sbjct: 355 KALPELQLALLERAAQCVALGG--ELVYSTCTIEPEENFEVVKAFRAKYPEFTPVNLAED 412
Query: 307 FP 308
FP
Sbjct: 413 FP 414
>gi|253682518|ref|ZP_04863315.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum D str. 1873]
gi|253562230|gb|EES91682.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum D str. 1873]
Length = 443
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 121/224 (54%), Gaps = 14/224 (6%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVN LK D D A +L + + +++ + P+ +I+ G + +PL +G V +Q +++
Sbjct: 181 VRVNNLKTDYDEAFNKLEEYGYSIEEGYVCPEAIIINKGKSIESNPLFEDGKVTVQDESA 240
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VAA + K G VLD CSAPG KT H++ +M GK++A ++++ ++ +KD K G
Sbjct: 241 MLVAATMDIKEGSLVLDLCSAPGGKTTHISEIMNNTGKVMAFDIHENKLSLVKDNAKRLG 300
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
NIE D + K ++ A+L+D CSG G ++ + +
Sbjct: 301 INNIECSKLDASKFNEKLKETAD--AVLIDVPCSGLGIIRKKPEIKYTKN---------- 348
Query: 247 MERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVI 289
ME + + QK+ +++A + V ++YSTC+I++ ENE I
Sbjct: 349 MESVKDIVNIQKEIMKNAARYVKVGGTLLYSTCTINKKENEQNI 392
>gi|17228315|ref|NP_484863.1| sun protein [Nostoc sp. PCC 7120]
gi|17130165|dbj|BAB72777.1| sun protein [Nostoc sp. PCC 7120]
Length = 449
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/205 (35%), Positives = 105/205 (51%), Gaps = 18/205 (8%)
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
P G +Q ++ +V L P+PG ++DAC+APG KT H+A LMK +GK+ A +
Sbjct: 229 PGFSQGWWIVQDASAQLVGHLLDPQPGEVIIDACAAPGGKTTHIAELMKDEGKVWAGDRT 288
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLD 230
R+R+LK+ + +IE+ GD NL P + +V +LLD CSG GT
Sbjct: 289 ASRLRKLKENAQRLNLHSIEICIGDSRNL----PQFYDVADRVLLDAPCSGLGT------ 338
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVI 289
L HA E + +LS QK+ L H F V V VY+TC++H ENE+VI
Sbjct: 339 --LHRHADARWRQTP--ESVQELSMLQKELLAHTSKFVKVGGVLVYATCTLHPAENEEVI 394
Query: 290 KSVLPIAMSFGFQLATPFPNGTAEA 314
+A + +Q+ P P+ A
Sbjct: 395 TEF--VAGNSDWQIEPPRPDSPYSA 417
>gi|452974522|gb|EME74342.1| 16S rRNA methyltransferase B [Bacillus sonorensis L12]
Length = 450
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 122/237 (51%), Gaps = 20/237 (8%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN LK D ++ + L + + ++ DL PD L L G + P G V
Sbjct: 176 IPPKQTIRVNKLKHDRETMLHRLREAGIKAEEGDLSPDGLKLLKGT-IATSPFFKEGDVT 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+ L++ GK+V+ +L++ +V+ +++
Sbjct: 235 IQDESSMLVARALGPKPGETVLDACAAPGGKSTHIGELLENTGKVVSLDLHRHKVKLIQE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYS----EVRAILLDPSCSGSGTAAERLDHLLPSH 236
G NI D +D + A + + IL+D CSG G + D
Sbjct: 295 AAGRLGLTNI-----DTRAMDARKAAEAFQPEQFDRILVDAPCSGFGVIRRKPD------ 343
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
++ P + RL + K + L G +VYSTC++ + ENE V+++ L
Sbjct: 344 -LKYSKTPEDSARLAGIQLAILKEIAPLLKKGGT--LVYSTCTMDRTENEQVMRAFL 397
>gi|428303896|ref|YP_007140721.1| sun protein [Crinalium epipsammum PCC 9333]
gi|428245431|gb|AFZ11211.1| sun protein [Crinalium epipsammum PCC 9333]
Length = 480
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 83/266 (31%), Positives = 131/266 (49%), Gaps = 26/266 (9%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDL-VPDLLILPPGCD 107
SIE++ A Q+ DV R N L ++ + A E+ Q +D + VP L L
Sbjct: 194 SIEEVEAEMQSADVTVNRINFKNPLSVNEEGAESEVSNQ----EDKISVPQALRLSGKIG 249
Query: 108 -LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
+ P G +Q ++ +V+ L P+PG V+DAC+APG KT H+A LM GK+
Sbjct: 250 AIQELPGFTEGWWTIQDSSAQLVSYLLDPQPGEVVIDACAAPGGKTTHIAELMGDVGKVW 309
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS-EVRAILLDPSCSGSGTA 225
C+ R+++LK+ + +I++ GD +L P ++ + LLD CSG GT
Sbjct: 310 GCDRTPSRLKKLKENAQRLNLKSIQICTGDSRDL----PQFTNKCDRALLDAPCSGLGTL 365
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
R D E + +LS Q + L HA ++ PG +VY+TC++H
Sbjct: 366 NRRADARWRQTP----------ETVRELSTLQAQLLDHAATWVKPG-GILVYATCTVHSP 414
Query: 284 ENEDVIKSVLPIAMSFGFQLATPFPN 309
ENED+I++ L + +Q+ P N
Sbjct: 415 ENEDIIQAFLDTHSN--WQIDPPLTN 438
>gi|83319809|ref|YP_424196.1| rRNA methyltransferase RsmB (sun protein) [Mycoplasma capricolum
subsp. capricolum ATCC 27343]
gi|83283695|gb|ABC01627.1| rRNA methyltransferase RsmB (sun protein), putative [Mycoplasma
capricolum subsp. capricolum ATCC 27343]
Length = 428
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 132/276 (47%), Gaps = 40/276 (14%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ 87
+LH + +L L +L++ K I + + + +PK Y+RVNTLK+ D +
Sbjct: 150 ILHSFSYELYL--MLIKQYDKEIVNQIVV-NNHQIPKL-YIRVNTLKITSDQLFNKYKDI 205
Query: 88 FVVQKDDLVPDLLILPP---GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
++++K + V D LI DL+ NG + +Q KAS +V+ L P KVLD
Sbjct: 206 YLLEKTN-VNDCLIANKTIINSDLYK-----NGFITIQDKASILVSQILNPSLNTKVLDM 259
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
CSAPG K HL+ ++K G IVA E+N+ +++ +K+ I NI V++ D K
Sbjct: 260 CSAPGGKLTHLSMILKNTGNIVANEINESKIKLIKENITRLNCLNISVINMD----ARKI 315
Query: 205 PAYSEVRAILLDPSCSGSGTAAE------RLDHLLPSHASGHTADPTEMERLNKLSAFQK 258
E ILLD CSG G R D + ++N + Q+
Sbjct: 316 KQRQEFDYILLDAPCSGFGVFKRKPEIKLRFDQI----------------QVNSIINLQE 359
Query: 259 KALRHA-LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ L A + +VYSTC+I+Q EN++ I L
Sbjct: 360 ELLESAYYNLKNNGEMVYSTCTINQDENQNQINKFL 395
>gi|256384049|gb|ACU78619.1| ribosomal RNA small subunit methyltransferase B [Mycoplasma
mycoides subsp. capri str. GM12]
gi|256384881|gb|ACU79450.1| ribosomal RNA small subunit methyltransferase B [Mycoplasma
mycoides subsp. capri str. GM12]
gi|296455325|gb|ADH21560.1| ribosomal RNA small subunit methyltransferase B [synthetic
Mycoplasma mycoides JCVI-syn1.0]
Length = 419
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 40/276 (14%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ 87
+LH + +L L +L++ K I + + + +PK Y+RVNTLK+ D +
Sbjct: 141 ILHSFSYELYL--MLIKQYDKEIVNQIVV-NNHQIPKL-YIRVNTLKITSDQLFNKYKDI 196
Query: 88 FVVQKDDLVPDLLILPP---GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
++++K + V D LI DL+ NG + +Q KAS +V+ L P KVLD
Sbjct: 197 YLLEKTN-VKDCLIANKTIINSDLYK-----NGFITIQDKASILVSQILNPSLNTKVLDM 250
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
CSAPG K HL+ ++K G IV E+N+ +++ +K+ I NI V++ D + K
Sbjct: 251 CSAPGGKLTHLSMILKNTGNIVGNEINESKIKLIKENINRLNCLNISVINMDARKIKQK- 309
Query: 205 PAYSEVRAILLDPSCSGSGTAAE------RLDHLLPSHASGHTADPTEMERLNKLSAFQK 258
E ILLD CSG G R D + ++N + Q+
Sbjct: 310 ---QEFDYILLDAPCSGFGVFKRKPEIKLRFDQI----------------QVNSIINLQE 350
Query: 259 KALRHA-LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ L A + +VYSTC+I+Q EN++ I L
Sbjct: 351 ELLESAYYNLKNNGEMVYSTCTINQDENQNQINKFL 386
>gi|331703221|ref|YP_004399908.1| Sun family protein [Mycoplasma mycoides subsp. capri LC str. 95010]
gi|328801776|emb|CBW53929.1| Sun family protein [Mycoplasma mycoides subsp. capri LC str. 95010]
Length = 423
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 85/270 (31%), Positives = 134/270 (49%), Gaps = 28/270 (10%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ 87
+LH + +L L +L++ K I + + + +PK Y+RVNTLK+ D +
Sbjct: 141 ILHSFSYELYL--MLIKQYDKEIVNQIVV-NNHQIPKL-YIRVNTLKITSDQLFNKYKDV 196
Query: 88 FVVQKDDLVPDLLILPP---GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
++++K + V D LI DL+ NG + +Q KAS +V+ L P KVLD
Sbjct: 197 YLLEKTN-VNDCLIANKTIINSDLYK-----NGFITIQDKASILVSQILNPSLNTKVLDM 250
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
CSAPG K HL+ ++K G IVA E+N+ +++ +K+ I NI + + D + K
Sbjct: 251 CSAPGGKLTHLSMILKNTGNIVANEINESKIKLIKENINRLNCLNISLTNMDARKIKQK- 309
Query: 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 264
E ILLD CSG G + + L D T++ N + Q++ L A
Sbjct: 310 ---QEFDYILLDAPCSGFGVFKRKPEIKLR-------FDQTQV---NNIINLQEELLESA 356
Query: 265 -LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ +VYSTC+I+Q EN++ I L
Sbjct: 357 YYNLKNNGEMVYSTCTINQDENQNQINKFL 386
>gi|385304057|gb|EIF48092.1| ynl022c-like protein [Dekkera bruxellensis AWRI1499]
Length = 287
Score = 105 bits (261), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 67/200 (33%), Positives = 107/200 (53%), Gaps = 20/200 (10%)
Query: 38 LAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELG-----------K 86
+ +L ++ V+S ++L+ +TP R+ R NT+ + E K
Sbjct: 88 MTKLKLKLHVQSFDELIEEDKTP----IRWFRANTVXSXCEXIAKEFNELERXYDIKSIK 143
Query: 87 QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW-KVLDAC 145
+ + D +P+L + P + G + +Q ++S A L PKPG KV+DAC
Sbjct: 144 KGTIYYDQYIPNLFGVDPLEKITSSAAYKQGRIIIQDRSSCFPAYILNPKPGVDKVIDAC 203
Query: 146 SAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPK 203
SAPGNKT HLA++++ I+A E + RV+ L+ K++GA IE+ HGDF P+
Sbjct: 204 SAPGNKTTHLASILRNTPNSIIAFEKDDHRVKTLEKMCKMAGALGCIEIRHGDFTQTKPE 263
Query: 204 DPAYSEVRAILLDPSCSGSG 223
D +++V +L+DPSCSGSG
Sbjct: 264 D--FTDVTGMLVDPSCSGSG 281
>gi|328955327|ref|YP_004372660.1| Fmu (Sun) domain-containing protein [Coriobacterium glomerans PW2]
gi|328455651|gb|AEB06845.1| Fmu (Sun) domain protein [Coriobacterium glomerans PW2]
Length = 325
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 84/236 (35%), Positives = 114/236 (48%), Gaps = 21/236 (8%)
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP---DLLILPPGCDLHVH--PLIVNGC 118
+P +R NTL D EL + + + + VP D +LP V P+ NG
Sbjct: 44 RPVTLRANTLIATGDEVGAELSEHGI--RWEAVPWYRDAFVLPESDKHEVQGLPIYENGG 101
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
V+LQ +S + ALAP PG VLD C+APG KT +AAL KG +I ACEL+ R RL
Sbjct: 102 VYLQSLSSMLPPLALAPMPGADVLDMCAAPGGKTSQIAALTKGTARICACELHAPRAARL 161
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ + + + ++ D LDP ILLD C+GSGT A + S
Sbjct: 162 EHNLAKLKVSGVTLMRCDARRLDP----LFSFDQILLDAPCTGSGTVA--------AGDS 209
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENEDVIKSVL 293
A T M L K+S Q L AL+ ++YSTCS+ ENED I+ +
Sbjct: 210 RGLARITPM-LLAKVSRAQAALLDRALTVLKTGGTLIYSTCSVLPAENEDQIRRAI 264
>gi|433544430|ref|ZP_20500814.1| ribosomal RNA small subunit methyltransferase [Brevibacillus agri
BAB-2500]
gi|432184285|gb|ELK41802.1| ribosomal RNA small subunit methyltransferase [Brevibacillus agri
BAB-2500]
Length = 448
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 111/223 (49%), Gaps = 11/223 (4%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
+RVN+LK + +L + + + IL G L G +Q ++S
Sbjct: 182 IRVNSLKTSASELLDKLAAEETAARQSALSPQAILVEGGHAAGSRLFREGYFTIQDESSM 241
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+VA ALA KPG +VLDAC+APG KT H+A LM+ +G IVAC+L+ + + T K G
Sbjct: 242 LVAPALAAKPGMRVLDACAAPGGKTTHIAELMENRGHIVACDLHPHKRDLIAQTAKRLGI 301
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
+ IE + D L+L D ILLD CSG G + D P ++
Sbjct: 302 SIIEPITSDALDL--PDRGLGTFDRILLDAPCSGFGVIRRKPD-------LKWNKTPEDV 352
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIK 290
+ +L KAL L+ GV +VYSTC+I EN+++++
Sbjct: 353 RAIAQLQYELLKALAPMLAADGV--LVYSTCTIEPKENQEIVQ 393
>gi|89895438|ref|YP_518925.1| hypothetical protein DSY2692 [Desulfitobacterium hafniense Y51]
gi|89334886|dbj|BAE84481.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 453
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 136/282 (48%), Gaps = 25/282 (8%)
Query: 17 LWPVGDAE--KFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
LWP + E ++L L + + + L R + D AL Q + P P ++R NTLK
Sbjct: 133 LWPSQEKEPVRYLSLRYSHPEWMVKRWLKRY---GMADTEALCQANNEPAPVWIRTNTLK 189
Query: 75 M---DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAA 131
+ D+ + + E G + + + VP+ L++ L P G +Q ++S ++A
Sbjct: 190 ISRADLQARLEEEGVKVTI--GERVPESLMIEEFGSLDQLPSFQEGLFTVQDESSQLIAH 247
Query: 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE 191
L P+ G KVLDAC APG KT HLA M+ +G+I+A +++ +V+ ++D G I
Sbjct: 248 VLNPQAGQKVLDACGAPGGKTTHLAQRMENQGEILAFDIHPHKVKLIEDLAARLGITIIR 307
Query: 192 VLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
GD L KD + +V L+D CSG G R D + H E + +
Sbjct: 308 AQAGDARELAGVKDASCHKV---LVDAPCSGLGVLRRRAD--MRWH--------KEEDEI 354
Query: 251 NKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKS 291
L A Q L R A +VYSTC+I EN +V+K+
Sbjct: 355 KTLPALQLAILERAAQCVAAGGELVYSTCTIEPEENFEVVKA 396
>gi|158320464|ref|YP_001512971.1| sun protein [Alkaliphilus oremlandii OhILAs]
gi|158140663|gb|ABW18975.1| sun protein [Alkaliphilus oremlandii OhILAs]
Length = 445
Score = 105 bits (261), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 138/261 (52%), Gaps = 22/261 (8%)
Query: 38 LAQLLVRN-KVKSIEDLM-ALYQTPDVPKPRYVRVNTLKMDV-DSAVLELGKQFVVQKDD 94
L QL +++ V +E+L+ A + PD+ Y+R+NTLK+ V D L + +VV++
Sbjct: 153 LVQLFLKHFDVNFVEELLKANNKKPDL----YLRINTLKISVADCIQLLEAEGYVVEQSK 208
Query: 95 LVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVH 154
+V + +++ ++ G + +Q +S +VA ALAPK G V+D CSAPG KT H
Sbjct: 209 IVEEAIVVKGIHNIEKTDFYKKGYIQIQDISSMLVAKALAPKEGELVMDICSAPGGKTTH 268
Query: 155 LAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY-SEVRAI 213
+A LM KGKI+A ++++ +++ + T K G I ++ + + D D ++ + +
Sbjct: 269 IAQLMNNKGKIIARDIHEHKLKLIDRTAKRLG---IHIIQTEKFSGDHLDESFIHKADKV 325
Query: 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-R 272
L+D CSG G + + E + + + Q K L+ A + +E
Sbjct: 326 LVDAPCSGLGIIRRKPE----------IKYRKEAQDITSIVELQYKILKTAAQYVKIEGT 375
Query: 273 VVYSTCSIHQVENEDVIKSVL 293
+VYSTC+I+ EN+ +++ L
Sbjct: 376 LVYSTCTINPEENDHIVQKFL 396
>gi|399574398|ref|ZP_10768157.1| nol1/nop2/sun family RNA methylase [Halogranum salarium B-1]
gi|399240230|gb|EJN61155.1| nol1/nop2/sun family RNA methylase [Halogranum salarium B-1]
Length = 311
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 79/261 (30%), Positives = 124/261 (47%), Gaps = 15/261 (5%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDL 108
++D A + D P P VRVNT+K V+ A L + V ++ D P++L L G
Sbjct: 11 VDDEEAFLEACDRPLPYSVRVNTIKATVERATEALDDEGVGYEQTDWNPEILRLTEGKAG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG V D C+APG+K+ L+ALM +G +VA
Sbjct: 71 TTWPYF-HGWLHGQEEVSALPAIALDPQPGETVWDTCAAPGSKSTQLSALMDDEGFVVAN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+ + R+ L+ + G N+ V + D N K + + L+D CS GT +
Sbjct: 130 DNSLGRLSALRHNAERLGVTNVAVTNKDARNFSLKPFDFDQFDRTLVDAPCSCEGTCRKN 189
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVENE 286
D L + M+ ++ + QK +R A+ + PG VVYSTC+ ENE
Sbjct: 190 PDAL----------EKWTMDHVHSVVGIQKGIIRRAIQATRPGG-TVVYSTCTFAPEENE 238
Query: 287 DVIKSVLPIAMSFGFQLATPF 307
++ L + TP
Sbjct: 239 AIVNHALETEDCEVVEFDTPL 259
>gi|431794643|ref|YP_007221548.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfitobacterium dichloroeliminans LMG P-21439]
gi|430784869|gb|AGA70152.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfitobacterium dichloroeliminans LMG P-21439]
Length = 453
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 130/278 (46%), Gaps = 19/278 (6%)
Query: 18 WPVGDAE--KFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM 75
WP + E ++L L + + + L R +E+ AL Q + P P ++R NTLK+
Sbjct: 134 WPSKEREPSRYLSLRYSHPEWMVKRWLKRY---GMEETEALCQANNEPAPTWIRTNTLKI 190
Query: 76 DVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALA 134
D V L + V V + VP+ L++ + P G +Q ++S ++A L
Sbjct: 191 TRDELVERLTNEGVQVTWGERVPESLLIEDFGSIERLPSFQEGLFTVQDESSQLIAHVLN 250
Query: 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 194
P+ G +VLD C+APG KT HLA M+ +G+I A +L+ +V+ +++ + G I
Sbjct: 251 PQRGQRVLDVCAAPGGKTTHLAQRMENEGEIQAFDLHPHKVKIIEELAQRLGITIIHAQA 310
Query: 195 GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLS 254
GD L + S +L+D CSG G R D H + E + L
Sbjct: 311 GDAREL--QGIGNSTCHKVLVDAPCSGLGVIRRRAD------MRWHKTE----EEIKSLP 358
Query: 255 AFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKS 291
Q L A + +VYSTC+I EN +VIK+
Sbjct: 359 ELQLALLERAAQCVALGGELVYSTCTIEPEENFEVIKA 396
>gi|399924362|ref|ZP_10781720.1| 16S rRNA methyltransferase B [Peptoniphilus rhinitidis 1-13]
Length = 432
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 76/259 (29%), Positives = 128/259 (49%), Gaps = 30/259 (11%)
Query: 51 EDLMALYQTPDVPKPRY-VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDL 108
ED + KP + +RVNTLK + + + L F ++ + + IL P +
Sbjct: 161 EDFTKKLLKANNEKPSFTIRVNTLKTNREELIKSLTNDGFEIEDTNFKNAINILNPRGII 220
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
NG ++Q S +V+ L P KVLD C+APG K+ HLA +M+ G+IVAC
Sbjct: 221 DT-KYFENGEFYVQDLGSILVSTFLNPSKDSKVLDLCAAPGGKSTHLAEIMENTGEIVAC 279
Query: 169 ELNKERVRRLKDTIKLSGAANI-------EVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
+ +K++++ +++ + G NI E+L+ DFL+ + +L+D CSG
Sbjct: 280 DKSKKKIKLIEENARRLGVKNIKTFVNDAEILNKDFLD---------KFDYVLVDAPCSG 330
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280
+G ++ D +++ L LS Q K L +A ++ + +VYSTCS+
Sbjct: 331 TGLYRKKPD----------IKWNKDIKDLKNLSEIQLKILENAKNYLKLGGHLVYSTCSL 380
Query: 281 HQVENEDVIKSVLPIAMSF 299
++ENEDV+ L +F
Sbjct: 381 SKIENEDVVYKFLEENENF 399
>gi|219669868|ref|YP_002460303.1| sun protein [Desulfitobacterium hafniense DCB-2]
gi|423074032|ref|ZP_17062766.1| ribosomal RNA small subunit methyltransferase B [Desulfitobacterium
hafniense DP7]
gi|219540128|gb|ACL21867.1| sun protein [Desulfitobacterium hafniense DCB-2]
gi|361855126|gb|EHL07128.1| ribosomal RNA small subunit methyltransferase B [Desulfitobacterium
hafniense DP7]
Length = 453
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 89/280 (31%), Positives = 132/280 (47%), Gaps = 21/280 (7%)
Query: 17 LWPVGDAE--KFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
LWP + E +FL L + + + L R + D AL Q + P P ++R NTLK
Sbjct: 133 LWPSKEKEPVRFLSLRYSHPEWMVKRWLKRY---GMADTEALCQANNEPAPVWIRTNTLK 189
Query: 75 MD-VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL 133
+ D G+ V + VP+ L++ L P G +Q ++S ++A L
Sbjct: 190 ISRADLQARLEGEGVKVTIGERVPESLVIEDFGSLDKLPSFQEGHFTVQDESSQLIAHVL 249
Query: 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL 193
P+ G KVLDAC APG KT HLA M+ +G+I+A +++ +V+ ++D G I
Sbjct: 250 NPQAGQKVLDACGAPGGKTTHLAQRMENQGEILAFDIHPHKVKLIEDLAARLGITIIRAQ 309
Query: 194 HGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNK 252
GD L KD + +V L+D CSG G R D + H E + +
Sbjct: 310 AGDARELAGVKDASCHKV---LVDAPCSGLGVLRRRAD--MRWH--------KEEDEIKT 356
Query: 253 LSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKS 291
L A Q L R A +VYSTC+I EN +V+K+
Sbjct: 357 LPALQLAILERAAQCVAAGGELVYSTCTIEPEENFEVVKA 396
>gi|427731853|ref|YP_007078090.1| ribosomal RNA small subunit methyltransferase RsmB [Nostoc sp. PCC
7524]
gi|427367772|gb|AFY50493.1| ribosomal RNA small subunit methyltransferase RsmB [Nostoc sp. PCC
7524]
Length = 449
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 137/285 (48%), Gaps = 34/285 (11%)
Query: 19 PVGDAEKFLMLHK---GAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM 75
P E+ +LH I++ L QL + + E + QTP + +R+N L+
Sbjct: 138 PENPVERLGILHSFPDWIIEVWLEQLGLEATERLCE---WMNQTPTID----LRINPLRT 190
Query: 76 DVDSAVLELGKQFVVQKDDLVPDL-----LILPPGCDLHVHPLIVNGCVFLQGKASSMVA 130
++ L ++ + +P+L LI G + P G +Q ++ +V+
Sbjct: 191 SIEEVETSLTSAGILAR--WIPNLPQALRLIGNTG-PIKNLPGFSQGWWVVQDASAQLVS 247
Query: 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190
L P+PG V+DAC+APG KT H+A LM+ +GKI AC+ R+R+LK+ + G +I
Sbjct: 248 HFLDPQPGEVVVDACAAPGGKTTHMAELMEDQGKIWACDRTASRLRKLKENAQRLGLHSI 307
Query: 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
++ GD +L + V LLD CSG GT L HA E +
Sbjct: 308 QICTGDSRDLSQFNHTADRV---LLDAPCSGLGT--------LHRHADARWRQTP--ESV 354
Query: 251 NKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+LS QK+ + +F PG +VY+TC++H ENEDVI L
Sbjct: 355 FELSTLQKELMSQTSNFVKPG-GVLVYATCTLHPAENEDVITEFL 398
>gi|194383320|dbj|BAG64631.1| unnamed protein product [Homo sapiens]
gi|221045242|dbj|BAH14298.1| unnamed protein product [Homo sapiens]
Length = 162
Score = 104 bits (260), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 85 GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS + A L P+
Sbjct: 19 GKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMP 76
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
KT HLAAL+K +GKI A +L+ R+ + + +G + E+ DFL + P D
Sbjct: 77 VPPQAIKTSHLAALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLD 136
Query: 205 PAYSEVRAILLDPSCSGSGTAAER 228
P Y EV +LLDPSCSGSG R
Sbjct: 137 PRYREVHYVLLDPSCSGSGEMVRR 160
>gi|402815959|ref|ZP_10865551.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
alvei DSM 29]
gi|402506999|gb|EJW17522.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
alvei DSM 29]
Length = 465
Score = 104 bits (260), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 78/267 (29%), Positives = 134/267 (50%), Gaps = 17/267 (6%)
Query: 42 LVRNKVKSI--EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPD 98
LV N VK+ E+ A+ ++ + P RVN L+ + + ++++ + V L D
Sbjct: 165 LVSNWVKAYGEEETAAMCESNNRPPHGSARVNALRTNREKLLVDMRAEGLNVMPSSLSKD 224
Query: 99 LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAAL 158
++ +L + NG + +Q ++S +V AL P+ G +VLD C+APG KT H+A
Sbjct: 225 GIVAEGAGNLALSQWYRNGELSVQDESSMLVVEALRPEAGMRVLDCCAAPGGKTTHIAER 284
Query: 159 MKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218
M KG++VA +++ +V + D + G ++ ++ D L + P S A+LLD
Sbjct: 285 MGNKGEVVANDVHAHKVALIADQAERLGLTSVATMNVDASILGRELPVGS-FDAVLLDAP 343
Query: 219 CSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYS 276
C+G G + D E + +++ Q + L A L PG R+VYS
Sbjct: 344 CTGFGVIRRKPDIKWAKRP----------EDVASIASLQAELLDQAAQLVRPG-GRLVYS 392
Query: 277 TCSIHQVENEDVIKSVLPIAMSFGFQL 303
TC++ + ENEDV++ L A G++L
Sbjct: 393 TCTVERAENEDVVRRFLAYAAEEGWEL 419
>gi|352096314|ref|ZP_08957194.1| sun protein [Synechococcus sp. WH 8016]
gi|351677008|gb|EHA60159.1| sun protein [Synechococcus sp. WH 8016]
Length = 451
Score = 104 bits (259), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 89/274 (32%), Positives = 131/274 (47%), Gaps = 16/274 (5%)
Query: 23 AEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVL 82
AE+ + H + A + L ++ +A Q P P +RVN L +
Sbjct: 152 AERLALSHSLPVWFAESLLNWTGPDQAERVAIASNQVP----PLDLRVNRLCSTPEFVAA 207
Query: 83 ELGKQFV-VQKDDLVPD-LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
EL + V Q + PD L +L P DL P G +Q +++ VA LAP+PG +
Sbjct: 208 ELAEAGVPTQPIEACPDGLQVLAPAGDLRRWPGFEQGHWSVQDRSAQGVAPLLAPQPGDR 267
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200
VLDAC+APG KT HLA LM G+I A + + R++R+ G A+I+ L D +L
Sbjct: 268 VLDACAAPGGKTTHLAELMGDGGEIWAVDRSAGRLKRVAANASRLGCASIQALAADATDL 327
Query: 201 DPKDPAYSE-VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259
+ P + + ILLD CSG GT + D + P +E L L A +
Sbjct: 328 LAQQPQWRGFFQRILLDVPCSGLGTLSRHPD-------ARWRVTPATVEELLPLQARLLE 380
Query: 260 ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
A+ L+ G R+VY+TC+IH EN + +L
Sbjct: 381 AMLPLLAPGG--RLVYATCTIHPDENVAQVNKLL 412
>gi|448409715|ref|ZP_21574842.1| tRNA and rRNA cytosine-C5-methylase [Halosimplex carlsbadense
2-9-1]
gi|445672486|gb|ELZ25058.1| tRNA and rRNA cytosine-C5-methylase [Halosimplex carlsbadense
2-9-1]
Length = 312
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 86/254 (33%), Positives = 119/254 (46%), Gaps = 20/254 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLH 109
++D A D P P VRVNTLK V+ A L + + + D L P
Sbjct: 11 VDDFDAFRAACDRPLPSVVRVNTLKTTVERARAALDEADIAHEPVGWHDGLFALPDDQPG 70
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
+ V G + Q + S++ AA L P+PG +V DAC+APG+KT LAALM G +VA +
Sbjct: 71 TNWPYVLGWIHGQEEVSAVPAAVLDPQPGERVWDACAAPGSKTTQLAALMDDTGLLVATD 130
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLN--LDP-KDPAYSEVRA------ILLDPSCS 220
N R+ L+ + +GA N+ V H D N L P + P R L+D CS
Sbjct: 131 NNLGRISALRSNAERAGATNVAVTHEDARNHSLKPFRAPDSDGGREGAPYDRALVDVPCS 190
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCS 279
GT + D L D E++ + +S QK LR A+ + VVYSTC+
Sbjct: 191 CEGTIRKNPDAL----------DDWELDHVEGISGVQKGVLRRAIQTTREGGTVVYSTCT 240
Query: 280 IHQVENEDVIKSVL 293
ENE V+ L
Sbjct: 241 FAPEENEAVLDHAL 254
>gi|20093483|ref|NP_613330.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19886312|gb|AAM01260.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 444
Score = 104 bits (259), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 84/250 (33%), Positives = 131/250 (52%), Gaps = 22/250 (8%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQK-DDLVPDLL-ILPPGC 106
IED + P V +YVRVNTL+ DVD L ++ V+ + D+ +PDLL ++
Sbjct: 166 EIEDFLRACNKPAV---KYVRVNTLRADVDEVRERLAEEGVLTEPDEHIPDLLRVVEEEI 222
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
+ G VF Q KAS+ VA L P+PG V+D C+APG KT+H LM+G+G+I+
Sbjct: 223 PIVRTEAWKEGLVFTQDKASAAVAHVLDPQPGEFVVDLCAAPGGKTLHALCLMEGEGEIL 282
Query: 167 ACELNKERVRRLKDTIKLSGAAN--IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
A + + R+ +++ + + +E+ D + P++ RAI +DP CSG G+
Sbjct: 283 AVDKSDWRLDAMREKLAWQRVPDGVVELRCADAREI-PEELDEEADRAI-VDPPCSGMGS 340
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQ 282
+R P T +R+ + + Q + L A+ PG VVYSTC++
Sbjct: 341 VQKR-----PETRWNVTK-----KRVRRYAKLQSELLEAAIKTVRPG-GIVVYSTCTLTI 389
Query: 283 VENEDVIKSV 292
ENE+VI+ V
Sbjct: 390 NENENVIRRV 399
>gi|399048081|ref|ZP_10739811.1| ribosomal RNA small subunit methyltransferase RsmB [Brevibacillus
sp. CF112]
gi|398053995|gb|EJL46141.1| ribosomal RNA small subunit methyltransferase RsmB [Brevibacillus
sp. CF112]
Length = 448
Score = 103 bits (258), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 75/223 (33%), Positives = 110/223 (49%), Gaps = 11/223 (4%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
+RVN+LK + +L + + + IL G L G +Q ++S
Sbjct: 182 IRVNSLKTSASELLDKLAAEETAARQSALSPQAILVEGGHAAGSRLFREGYFTIQDESSM 241
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+VA ALA KPG +VLDAC+APG KT H+A LM+ +G IVAC+L+ + + T K G
Sbjct: 242 LVAPALAAKPGMRVLDACAAPGGKTTHIAELMENRGHIVACDLHPHKRDLIAQTAKRLGI 301
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
+ IE + D L+L D ILLD CSG G + D P ++
Sbjct: 302 SIIEPITSDALDL--PDRGLGTFDRILLDAPCSGFGVIRRKPD-------LKWNKTPEDV 352
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIK 290
+ +L KAL L+ GV +VYSTC+I EN+ +++
Sbjct: 353 RAIAQLQYELLKALAPMLAADGV--LVYSTCTIEPEENQKIVQ 393
>gi|315230766|ref|YP_004071202.1| ribosomal RNA small subunit methyltransferase B [Thermococcus
barophilus MP]
gi|315183794|gb|ADT83979.1| ribosomal RNA small subunit methyltransferase B [Thermococcus
barophilus MP]
Length = 465
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 84/261 (32%), Positives = 128/261 (49%), Gaps = 29/261 (11%)
Query: 68 VRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+RVNTLK VD V L GK+ V+ + VP ++ + D L G + +Q +
Sbjct: 203 IRVNTLKTTVDEVVEALRSEGKE--VKVSERVPTIVKIKGPYDFDRSKLFREGKILVQEE 260
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS++ + L PKPG V+D +APG KT H+A LM+ KGKI A ++++ R++R+K+ +K
Sbjct: 261 ASAVASLILDPKPGMTVVDLAAAPGGKTSHIAELMRNKGKIYAFDIDEFRIKRMKEILKR 320
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
G ++++ D PK +LLD C+ SGT G +
Sbjct: 321 MGVNIVKIIRKDGRKA-PKILGRGIADRVLLDAPCTSSGTI-------------GKNPEL 366
Query: 245 TEMERLNK---LSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
R NK ++ QK L+ A PG R++Y+TCS+ ENE+ I+ L +F
Sbjct: 367 RWRLRENKILEIAELQKDLLKVAAQLLKPG-GRLLYATCSLFPEENEENIEWFLGTYDNF 425
Query: 300 GFQLATPFPNGTAEASQFLKA 320
P NG + S LK
Sbjct: 426 RL---IPL-NGPYDESPLLKG 442
>gi|257438997|ref|ZP_05614752.1| ribosomal RNA small subunit methyltransferase B [Faecalibacterium
prausnitzii A2-165]
gi|257198582|gb|EEU96866.1| ribosomal RNA small subunit methyltransferase B [Faecalibacterium
prausnitzii A2-165]
Length = 440
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 122/246 (49%), Gaps = 15/246 (6%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+R N LKMD + +L + V + LVP ++ HPL GC ++G+AS
Sbjct: 178 LRANCLKMDAAALCEKLLESGVKSAQPGLVPGSVLAKFEGSPAEHPLFKEGCFHVEGQAS 237
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A + KPG V+D C+APG KT+ LA M+G+G + +C++ + RV ++ ++ G
Sbjct: 238 QLAALCVEAKPGDTVIDLCAAPGGKTLLLAEEMQGQGALYSCDVAEHRVGLIRSAVERMG 297
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
A++ L D +PK PA IL+D CSG G A++ D + E
Sbjct: 298 FAHVTALCNDATRPNPKLPAADR---ILVDAPCSGLGILAKKPDIRYKT---------LE 345
Query: 247 MERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG-FQLA 304
R ++L A Q L A + R+VYSTC+I ENE+ + + L F + A
Sbjct: 346 KARHDELLATQSSILDTAAALLKAGGRLVYSTCTIDPAENEEQVAAFLARHPEFRVVRPA 405
Query: 305 TPFPNG 310
FP+G
Sbjct: 406 VAFPDG 411
>gi|282895327|ref|ZP_06303529.1| Fmu, rRNA SAM-dependent methyltransferase [Raphidiopsis brookii D9]
gi|281199633|gb|EFA74493.1| Fmu, rRNA SAM-dependent methyltransferase [Raphidiopsis brookii D9]
Length = 465
Score = 103 bits (258), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 22/244 (9%)
Query: 56 LYQTPDVPKPRYVRVNTLK--MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPL 113
+ QTP + +RVN L+ +++ +V + V + L L ++ P + P
Sbjct: 196 MNQTPTID----LRVNILRASLEMVESVFKKAGILVDRIPHLPQGLRLVNPAGPIQNLPG 251
Query: 114 IVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKE 173
G +Q A+ +V L PKPG ++D C+APG KT H+A LM GKI AC+
Sbjct: 252 FTEGWWCIQDAAAQLVGHLLDPKPGEVIIDVCAAPGGKTTHIAELMGDNGKIYACDRTPS 311
Query: 174 RVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL 233
R+R+L + + +IE+ GD N + +LLD CSG GT D
Sbjct: 312 RLRKLSENAQRLRLQSIEIFPGDSRNF---TQFHHVADRVLLDAPCSGLGTMHRHAD--- 365
Query: 234 PSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKS 291
+ DP+ + L+ QK+ + H F PG +VY+TC++H ENED+I+
Sbjct: 366 ----ARWRQDPSS---VGDLAHIQKELISHTAKFVKPG-GVLVYATCTLHPQENEDLIRE 417
Query: 292 VLPI 295
L I
Sbjct: 418 FLHI 421
>gi|257388869|ref|YP_003178642.1| RNA methylase [Halomicrobium mukohataei DSM 12286]
gi|257171176|gb|ACV48935.1| RNA methylase, NOL1/NOP2/sun family [Halomicrobium mukohataei DSM
12286]
Length = 305
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 85/253 (33%), Positives = 121/253 (47%), Gaps = 24/253 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP---PG 105
I+D A P P VRVNTLK VD A+ L + V++ D LL LP PG
Sbjct: 11 IDDFSAFRDACARPLPPVVRVNTLKTTVDRAIRALRDEGITVERTDWHEGLLELPDDQPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ P +G ++ Q + S++ L P+PG ++ DAC+APG+KT +AA G +
Sbjct: 71 ANW---PYF-HGWIYGQEEVSAVPVRVLGPEPGERIWDACAAPGSKTSQIAARQGDDGVV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLN--LDP-KDPAYSEVRAILLDPSCSGS 222
VA + N R+ L+ + G ++ V H D N L P D +E L+D CS
Sbjct: 127 VATDSNLGRLSALRTNTEQLGITSVAVTHEDARNHSLKPFGDDDSAEYDRALVDVPCSCE 186
Query: 223 GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSI 280
GT + D L D +E + ++ QK LR A+ + PG VVYSTC+
Sbjct: 187 GTVRKNPDTL----------DEWTLEHVEGIAGVQKGVLRRAIQTTKPG-GTVVYSTCTF 235
Query: 281 HQVENEDVIKSVL 293
ENE V+ L
Sbjct: 236 APEENEAVLDYAL 248
>gi|167378845|ref|XP_001734952.1| williams-beuren syndrome critical region protein [Entamoeba dispar
SAW760]
gi|165903270|gb|EDR28871.1| williams-beuren syndrome critical region protein, putative
[Entamoeba dispar SAW760]
Length = 266
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 62/158 (39%), Positives = 84/158 (53%), Gaps = 11/158 (6%)
Query: 66 RYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+Y R+NTL+ V ++ V+ D+ +P+L L P L + L+ Q K
Sbjct: 115 KYYRLNTLRTKVFPSISN-----KVEPDEFIPNLYKLTPPLSLPIDTLLS------QDKP 163
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S A L P +DAC+APGNKT HLA +M G I A + + +R L+ T+K
Sbjct: 164 SCFPAFILKPPENSICIDACAAPGNKTTHLATIMNNTGIIYAFDKDSKRAELLRTTVKNY 223
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
A NIEV+ GDFL D +D + V IL DPSCSGSG
Sbjct: 224 QATNIEVICGDFLQSDIEDIRFENVTHILCDPSCSGSG 261
>gi|18977637|ref|NP_578994.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus furiosus DSM
3638]
gi|18893359|gb|AAL81389.1| putative nucleolar protein II (nol1-nop2-sun family) [Pyrococcus
furiosus DSM 3638]
Length = 450
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 27/254 (10%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFV----VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P+ YVR+N+LK D++ L + V DD++ L P L + G
Sbjct: 186 PQRYYVRINSLKADIEKVKKYLEENGVRVAYTPVDDVLKVLEYEKPITKLEGYK---KGY 242
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+Q AS+ VA L+P+PG +VLD +APG+KT H AALM+ KG+IVA + + ER+ R+
Sbjct: 243 FVIQDLASAYVAHVLSPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYERLVRM 302
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
K+ +K G N+++++ D + K+ + I+LD CS SGT + P
Sbjct: 303 KERMKKLGVKNVKLVYADGQSYIDKE----KFDKIILDAPCSSSGTYRQ-----FPEVKW 353
Query: 239 GHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
E++ ++ + Q+ L +A + + YSTCS+ ENE+ + +
Sbjct: 354 RFNE-----EKIKRIISVQRNMLINAFRNLKEGGEMTYSTCSVRIDENEENV----MFGL 404
Query: 298 SFGFQLA-TPFPNG 310
GF++ PF G
Sbjct: 405 ERGFEIVDYPFSWG 418
>gi|258645366|ref|ZP_05732835.1| ribosomal RNA small subunit methyltransferase B [Dialister invisus
DSM 15470]
gi|260402715|gb|EEW96262.1| ribosomal RNA small subunit methyltransferase B [Dialister invisus
DSM 15470]
Length = 454
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 114/239 (47%), Gaps = 22/239 (9%)
Query: 68 VRVNTLKMDVDSAVLELG-KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+RVNTLK++ D +L + V +P+ L + G D+ + G +++Q +S
Sbjct: 191 IRVNTLKIETDDIKKQLKLRNISVGDISYMPEALAIKAGTDILFSEFLQTGLIYIQTASS 250
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P G VLD C+APG+KT H+AALM +G I A ++ +V+ +KD K G
Sbjct: 251 MIPAKVLGPDAGDHVLDMCAAPGSKTTHIAALMGNRGSIDAWDVYPHKVKLIKDNAKRLG 310
Query: 187 AANIEVLHGDFLN-LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
I ++H + + + P Y +LLD CSG G GH +
Sbjct: 311 ---ISIIHTEVRDSVKPLPFLYETYDKVLLDAPCSGLGVL-------------GHKVELR 354
Query: 246 EMERLNKLSAF---QKKALRHALSFPGVERV-VYSTCSIHQVENEDVIKSVLPIAMSFG 300
+ + LS F QK+ + A + V VYSTC+++ ENE +I L + F
Sbjct: 355 WRRKESDLSVFPPLQKQLIEQAAKYTKTGGVLVYSTCTLNPDENEHIINEFLSLHSEFA 413
>gi|354558670|ref|ZP_08977924.1| sun protein [Desulfitobacterium metallireducens DSM 15288]
gi|353545732|gb|EHC15182.1| sun protein [Desulfitobacterium metallireducens DSM 15288]
Length = 453
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 123/258 (47%), Gaps = 18/258 (6%)
Query: 46 KVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPP 104
K E+ AL QT + P ++R N L++ + V L K+ V V + VP+ L+L
Sbjct: 161 KRYGFEETEALCQTNNEIAPLWIRTNILRITREELVDRLQKENVEVSLGERVPESLVLEN 220
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L G +Q ++S +VA L P+PG VLDAC+APG KT HLA MK +GK
Sbjct: 221 SGALDKLASFQEGLFAVQDESSQLVAHILNPQPGDIVLDACAAPGGKTTHLAQKMKNQGK 280
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I+A +++ +V + + G NI+ GD L + + +L+D CSG G
Sbjct: 281 ILAFDIHPHKVELIAQLAERLGITNIQAQAGDARELPGIENGTCQ--KVLVDAPCSGLGV 338
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA---LSFPGVERVVYSTCSIH 281
R D E E + KL + Q + L A ++ G +VYSTC++
Sbjct: 339 IRRRADLRWNK----------EEEEIGKLPSLQLEILERAAQCVALGG--ELVYSTCTVE 386
Query: 282 QVENEDVIKSVLPIAMSF 299
EN +V+K+ + F
Sbjct: 387 PEENFEVVKAFRKVHPEF 404
>gi|440468731|gb|ELQ37873.1| hypothetical protein OOU_Y34scaffold00567g20 [Magnaporthe oryzae
Y34]
gi|440478831|gb|ELQ59630.1| hypothetical protein OOW_P131scaffold01338g69 [Magnaporthe oryzae
P131]
Length = 585
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 41/235 (17%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQ---TPDVPKPRYVRVNTLKM----------- 75
HK + L + +R K +++ L A + + PR+VRVNTL+
Sbjct: 128 HKARLSSELTRARIRRKAPTLDALKAQVDEATSSEAGHPRWVRVNTLRSTLAEQLEITFS 187
Query: 76 ---DVDSAVLELGKQF--------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
VDS + + K + D+ VP+L+ + PG D+ +G V LQ K
Sbjct: 188 RYSKVDSVLDVVTKGSGNGGPSCNRIYLDEHVPNLVAISPGSDITKTEAYKSGAVILQDK 247
Query: 125 ASSMVAAALAPKP-GWKVLDACSAPGNKTVHLAALMK-------------GKGKIVACEL 170
AS A L P+P V+DAC+APGNKT H AA+++ + + A E
Sbjct: 248 ASCFPAYLLDPRPEDGDVIDACAAPGNKTTHAAAVLEEYRTAVNVKESKGSRSTVHAFEK 307
Query: 171 NKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+ R L +K++G+ + V++ DF+ DP P Y +V A+LLDPSCSGSG
Sbjct: 308 DSRRAEILAKMVKIAGSDSFTVVNKGKDFMKADPNSPLYKDVAALLLDPSCSGSG 362
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
FQ L HA+ FP +R+ YSTCSIH ENE V+
Sbjct: 448 FQATLLEHAMKFPSAKRITYSTCSIHAEENEGVV 481
>gi|397651760|ref|YP_006492341.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus furiosus
COM1]
gi|393189351|gb|AFN04049.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus furiosus
COM1]
Length = 433
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 127/254 (50%), Gaps = 27/254 (10%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFV----VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P+ YVR+N+LK D++ L + V DD++ L P L + G
Sbjct: 169 PQRYYVRINSLKADIEKVKKYLEENGVRVAYTPVDDVLKVLEYEKPITKLEGYK---KGY 225
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+Q AS+ VA L+P+PG +VLD +APG+KT H AALM+ KG+IVA + + ER+ R+
Sbjct: 226 FVIQDLASAYVAHVLSPEPGERVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYERLVRM 285
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
K+ +K G N+++++ D + K+ + I+LD CS SGT + P
Sbjct: 286 KERMKKLGVKNVKLVYADGQSYIDKE----KFDKIILDAPCSSSGTYRQ-----FPEVKW 336
Query: 239 GHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
E++ ++ + Q+ L +A + + YSTCS+ ENE+ + +
Sbjct: 337 RFNE-----EKIKRIISVQRNMLINAFRNLKEGGEMTYSTCSVRIDENEENV----MFGL 387
Query: 298 SFGFQLA-TPFPNG 310
GF++ PF G
Sbjct: 388 ERGFEIVDYPFSWG 401
>gi|440636056|gb|ELR05975.1| hypothetical protein GMDG_01936 [Geomyces destructans 20631-21]
Length = 623
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 109/236 (46%), Gaps = 42/236 (17%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQT--------PDVPKPRYVRVNTLKMDVDSAV 81
HK + + +R + S+E L + P PR++R+NTLK ++ +
Sbjct: 102 HKARLTAEFTRARIRRGLGSLEALTEHVEAGGDNTSGIPVTTHPRWIRINTLKTTLEDQL 161
Query: 82 LELGKQFV-------VQK--------DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
K + VQK D VP+L+ +PP DL +G + Q KAS
Sbjct: 162 ATTFKDYTRALEVSEVQKRGGKKILLDAHVPNLIAVPPSADLTKSAAYTSGALIFQDKAS 221
Query: 127 SMVAAALAP-KPGWKVLDACSAPGNKTVHLAALMKGKG----------------KIVACE 169
A L P V+D+C+APGNKT HLA+++ KI A E
Sbjct: 222 CFPAYLLDPLAEDGDVIDSCAAPGNKTTHLASILASHSLAVDIADPTTLAELPQKIHAFE 281
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+K R L + L+G+ + +H DFL DP+ P +++V A+LLDPSCSGSG
Sbjct: 282 KDKVRATTLAKMVALAGSDGMTKIHAATDFLKADPESPQFAKVGALLLDPSCSGSG 337
Score = 41.6 bits (96), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 27/43 (62%), Gaps = 2/43 (4%)
Query: 263 HALSFPGVERVVYSTCSIHQVENEDVIKSVLP--IAMSFGFQL 303
HA+ FPG ++ YSTCS H ENE V+ + L +A G+++
Sbjct: 435 HAMRFPGARKMTYSTCSEHNEENEGVVLAALESGVARERGWRV 477
>gi|448666899|ref|ZP_21685544.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula amylolytica JCM
13557]
gi|445772030|gb|EMA23086.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula amylolytica JCM
13557]
Length = 303
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 115/250 (46%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
I+D A + P P VRVNT+K V+ L + D L +LP PG
Sbjct: 11 IDDFEAFIDACERPLPSAVRVNTIKASVERVRTALADADIAYDPVDWHDGLFVLPEDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ +G + Q + S + A L P+PG +V DAC+APG+KT LAALM+ G++
Sbjct: 71 ANWP----YFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTTQLAALMEDTGEV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA + V H D N K E L+D CS GT
Sbjct: 127 VATDNNLGRISALRTNTERLGATTVAVTHEDGRNHSLKPFGGEEYDRALVDVPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
+ D T + + + +S QK L+ A+ PG VVYSTC+
Sbjct: 187 RKNPD----------TLEDWTLSHVEGISGVQKGILKRAIEVTEPG-GTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE V+ VL
Sbjct: 236 ENEAVLDYVL 245
>gi|76779239|gb|AAI06050.1| NSUN5C protein [Homo sapiens]
Length = 204
Score = 103 bits (256), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/144 (40%), Positives = 80/144 (55%), Gaps = 2/144 (1%)
Query: 85 GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
GK F++ D L+P+LL+ P DLH HPL G + LQ +AS + A L P+
Sbjct: 61 GKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMP 118
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
KT HLAAL+K +GKI A +L+ R+ + + +G + E+ DFL + P D
Sbjct: 119 VPPQAIKTSHLAALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLD 178
Query: 205 PAYSEVRAILLDPSCSGSGTAAER 228
P Y EV +LLDPSCSGSG R
Sbjct: 179 PRYREVHYVLLDPSCSGSGEMVRR 202
>gi|345017809|ref|YP_004820162.1| sun protein [Thermoanaerobacter wiegelii Rt8.B1]
gi|344033152|gb|AEM78878.1| sun protein [Thermoanaerobacter wiegelii Rt8.B1]
Length = 444
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 114/229 (49%), Gaps = 18/229 (7%)
Query: 69 RVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
RVNTLK+D++ L +V K + + + H L G +++Q +AS +
Sbjct: 180 RVNTLKIDIEDLKRLLDSDGIVYKKGYYLEEALYIDIKNPERHQLYKEGLIYIQDEASML 239
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
V+ L PK G VLD C+APG KT H+A LMK G+++A +L+ R+ +K+ K G
Sbjct: 240 VSKTLNPKEGDTVLDVCAAPGGKTTHIAQLMKNSGEVIAFDLHPHRLELIKENCKRLGIT 299
Query: 189 NI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
N+ EV F+N + + +L D C+G G ++ D L ++ ++ E
Sbjct: 300 NVKTEVFDSTFVN----EKYLEKADKVLADVPCTGIGIIRKKPDIKLKNYTRKEISELIE 355
Query: 247 MER--LNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ L+ S + KK F +VYSTC+I + EN++VI L
Sbjct: 356 AQYKILDSSSKYVKKG-----GF-----LVYSTCTIGKEENQNVIMKFL 394
>gi|323307417|gb|EGA60692.1| YNL022C-like protein [Saccharomyces cerevisiae FostersO]
Length = 399
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 120/236 (50%), Gaps = 29/236 (12%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDL-MALYQTPDVPKPRYVRVNTLKM-- 75
P+ D +++ K + + +L ++ KV+ + +L ++ + D+P R++R+N LK
Sbjct: 109 PIKD---YVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHP 165
Query: 76 --DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+ + + EL K+F ++ D+ +P+L + P + H L +G +
Sbjct: 166 NGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKII 225
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KGKGKIVACELNKER 174
+Q +AS A L P P V+D+CSAPGNKT H A+ + +I A E + ER
Sbjct: 226 IQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTASYIYPEPPKDNNTRIYAFEKDPER 285
Query: 175 VRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ L+ IK++G + NI V GDF L + Y +V ++DPSCSGSG +
Sbjct: 286 AKVLQKMIKIAGCSPNISVNVGDFTKLATPE-KYKDVTCFIVDPSCSGSGIFGRKF 340
>gi|76155377|gb|AAX26657.2| SJCHGC03823 protein [Schistosoma japonicum]
Length = 259
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 58/127 (45%), Positives = 76/127 (59%), Gaps = 8/127 (6%)
Query: 190 IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD-------HLLPSHASGHTA 242
+E DFL++DP DP +S V++ILLDPSCSGSG + + D L S T
Sbjct: 18 VEASCTDFLSVDPYDPKFSNVQSILLDPSCSGSGLSIRQPDGEQQLKNSQLKGDYSTDTY 77
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ 302
+ + RL +LS Q LRHAL+FP V+R+VYSTCSIH ENE V++ I +S F
Sbjct: 78 NEEYLSRLKRLSNLQAMLLRHALNFPNVQRIVYSTCSIHPEENEAVVQEN-AIRVSDKFY 136
Query: 303 LATPFPN 309
L T +PN
Sbjct: 137 LETIWPN 143
>gi|326389542|ref|ZP_08211109.1| sun protein [Thermoanaerobacter ethanolicus JW 200]
gi|392940847|ref|ZP_10306491.1| ribosomal RNA small subunit methyltransferase RsmB
[Thermoanaerobacter siderophilus SR4]
gi|325994547|gb|EGD52972.1| sun protein [Thermoanaerobacter ethanolicus JW 200]
gi|392292597|gb|EIW01041.1| ribosomal RNA small subunit methyltransferase RsmB
[Thermoanaerobacter siderophilus SR4]
Length = 444
Score = 103 bits (256), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 114/229 (49%), Gaps = 18/229 (7%)
Query: 69 RVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
RVNTLK+D++ L +V K + + + H L G +++Q +AS +
Sbjct: 180 RVNTLKIDIEDLKRLLDSDGIVYKKGYYLEEALYIDIKNPERHQLYKEGLIYIQDEASML 239
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
V+ L PK G VLD C+APG KT H+A LMK G+++A +L+ R+ +K+ K G
Sbjct: 240 VSKTLNPKEGDTVLDVCAAPGGKTTHIAQLMKNSGEVIAFDLHPHRLELIKENCKRLGIT 299
Query: 189 NI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
N+ EV F+N + + +L D C+G G ++ D L ++ ++ E
Sbjct: 300 NVKTEVFDSTFVN----EKYLEKADKVLADVPCTGIGIIRKKPDIKLKNYTRKEISELIE 355
Query: 247 MER--LNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ L+ S + KK F +VYSTC+I + EN++VI L
Sbjct: 356 AQYKILDSSSKYVKKG-----GF-----LVYSTCTIGKEENQNVIMKFL 394
>gi|389625939|ref|XP_003710623.1| hypothetical protein MGG_05721 [Magnaporthe oryzae 70-15]
gi|351650152|gb|EHA58011.1| hypothetical protein MGG_05721 [Magnaporthe oryzae 70-15]
Length = 557
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/235 (31%), Positives = 113/235 (48%), Gaps = 41/235 (17%)
Query: 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQ---TPDVPKPRYVRVNTLKM----------- 75
HK + L + +R K +++ L A + + PR+VRVNTL+
Sbjct: 100 HKARLSSELTRARIRRKAPTLDALKAQVDEATSSEAGHPRWVRVNTLRSTLAEQLEITFS 159
Query: 76 ---DVDSAVLELGKQF--------VVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
VDS + + K + D+ VP+L+ + PG D+ +G V LQ K
Sbjct: 160 RYSKVDSVLDVVTKGSGNGGPSCNRIYLDEHVPNLVAISPGSDITKTEAYKSGAVILQDK 219
Query: 125 ASSMVAAALAPKP-GWKVLDACSAPGNKTVHLAALMK-------------GKGKIVACEL 170
AS A L P+P V+DAC+APGNKT H AA+++ + + A E
Sbjct: 220 ASCFPAYLLDPRPEDGDVIDACAAPGNKTTHAAAVLEEYRTAVNVKESKGSRSTVHAFEK 279
Query: 171 NKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+ R L +K++G+ + V++ DF+ DP P Y +V A+LLDPSCSGSG
Sbjct: 280 DSRRAEILAKMVKIAGSDSFTVVNKGKDFMKADPNSPLYKDVAALLLDPSCSGSG 334
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/34 (55%), Positives = 23/34 (67%)
Query: 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
FQ L HA+ FP +R+ YSTCSIH ENE V+
Sbjct: 420 FQATLLEHAMKFPSAKRITYSTCSIHAEENEGVV 453
>gi|126649674|ref|ZP_01721910.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus sp. B14905]
gi|126593393|gb|EAZ87338.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus sp. B14905]
Length = 453
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 86/296 (29%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 6 RIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKP 65
R+ + T+ HP+W L Q V N +E + +VP
Sbjct: 148 RLAIETS--HPIW-------------------LVQRFVDNY--GLEVATGMLHENNVPPM 184
Query: 66 RYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+ VRVNT K+ V+ A+ EL + ++ +++P+ L L G H G + +Q +
Sbjct: 185 QTVRVNTTKVTVEQAIAELEAEGLTAKQSEVIPECLHLTNGQPARTHAF-KEGHITIQDE 243
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
+S + A L P PG +VLD C+APG KT HLA +MK +G I+A +L+ ++ D I
Sbjct: 244 SSMIPANVLNPSPGMRVLDMCAAPGGKTTHLAEIMKNEGSILATDLHPHKL----DLID- 298
Query: 185 SGAANIEVLHGDFLNLDPKD----PAYSEVR---AILLDPSCSGSGTAAERLDHLLPSHA 237
N E L D + P D P + + A+L+D CSG G + D
Sbjct: 299 ---HNTERLGLDIIETAPIDGRKAPEFLQAESYDAVLVDAPCSGLGVMRRKPD------- 348
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+T ++E L + A L G ++VYSTC++ + ENE +K+ L
Sbjct: 349 IKYTKREEDLENLQTIQLALLDAATKVLKIEG--KLVYSTCTVDKQENEGTVKAFL 402
>gi|157132828|ref|XP_001662658.1| williams-beuren syndrome critical region protein [Aedes aegypti]
gi|108881621|gb|EAT45846.1| AAEL002888-PA, partial [Aedes aegypti]
Length = 620
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 123/261 (47%), Gaps = 45/261 (17%)
Query: 61 DVPKPRYVRVNTLKM-------------------------DVDSAVLELG-KQFVVQKDD 94
D +PRYVR+NT + D V +LG +F+V D
Sbjct: 128 DFKEPRYVRINTNVLAQPGAIRLLQEEGWVLVEEEFEKYGDFLERVKKLGDSEFIV--DF 185
Query: 95 LVPDLLILPPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTV 153
++L+ P + + + LQ KA + L P VLD C+APG KT
Sbjct: 186 HFKEMLVFPNSAKNYWARAMELKQKFVLQNKACIIPTYLLNPPKKSVVLDMCAAPGLKTT 245
Query: 154 HLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213
HLA LMK KG+I A E + R + L D G I+ ++ D + L +D A V I
Sbjct: 246 HLANLMKNKGRIYAVERDANRYKLLCDYAADFGV--IKAINDDCM-LVGEDQAPG-VEYI 301
Query: 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVER 272
LLDPSCSGSG + RL + + +RL +L Q K L HA++ FP +R
Sbjct: 302 LLDPSCSGSGMVS-RL----------KLNEEYDKQRLYRLGGLQYKLLCHAMNAFPSAKR 350
Query: 273 VVYSTCSIHQVENEDVIKSVL 293
+VYSTCSI ENED+++ L
Sbjct: 351 IVYSTCSIFPEENEDIVQGAL 371
>gi|18310723|ref|NP_562657.1| RNA-binding Sun protein [Clostridium perfringens str. 13]
gi|18145404|dbj|BAB81447.1| probable RNA-binding Sun protein [Clostridium perfringens str. 13]
Length = 442
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/226 (31%), Positives = 122/226 (53%), Gaps = 18/226 (7%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNT K D D L ++ + +++ P+ +I+ G + + L G + +Q +++
Sbjct: 178 VRVNTCKADYDEVYERLEEEGYDIEEGAFSPEAIIIKKGSAIEKNKLYQEGLITVQDESA 237
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA K +V+D CSAPG K H+ LM KGK+VA +++ ++ +K+ I G
Sbjct: 238 MLVAPLFDLKGDEQVMDLCSAPGTKATHIGELMMNKGKVVAFDIHDHKLALIKENIDRLG 297
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS-HASGHTADPT 245
N+EV GD ++ K +++ ILLD CSG G ++ P + D T
Sbjct: 298 LTNVEVELGDATKINSKYINWAD--RILLDVPCSGLGIIRKK-----PEIKWNKKNNDLT 350
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
E+ ++ QK+ L++A ++ G E +VYSTC++++ ENE+VI
Sbjct: 351 EVVKV------QKEILKNAWNYLREGGE-LVYSTCTLNKKENEEVI 389
>gi|149182346|ref|ZP_01860824.1| sun protein [Bacillus sp. SG-1]
gi|148849965|gb|EDL64137.1| sun protein [Bacillus sp. SG-1]
Length = 445
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/279 (30%), Positives = 136/279 (48%), Gaps = 19/279 (6%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AI+ + Q LV+ + IE + +T + RVNTL++ VD + L ++
Sbjct: 145 AIETSHPQWLVKRWTEQFGIEKTREMCETNITAPHQSARVNTLRITVDELIDRLTEEGLT 204
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
VQK +VP+ +I G +L +G + +Q ++S +V +L + VLD+C+APG
Sbjct: 205 VQKSSIVPNAIISLKG-NLAKTAAFKDGLLTIQDESSMLVGHSLDVHEDFTVLDSCAAPG 263
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
KT H+A LM+GKGK+ A +L+K +++ + + G NIE D A S
Sbjct: 264 GKTTHIAQLMEGKGKVFALDLHKHKIKLINENASRLGLGNIESKAHDSRRAGELFAAESF 323
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269
R IL+D CSG G + D +T +++E L + +A+ L G
Sbjct: 324 DR-ILVDAPCSGLGVLRRKPD-------IKYTKKESDLESLQTIQLQILEAVSPLLKKGG 375
Query: 270 VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFP 308
+ +VYSTC++ + EN+ +K L F PFP
Sbjct: 376 L--LVYSTCTVDRNENQGTVKEFLDGNKEF-----QPFP 407
>gi|303257735|ref|ZP_07343747.1| putative ribosomal RNA small subunit methyltransferase B
[Burkholderiales bacterium 1_1_47]
gi|302859705|gb|EFL82784.1| putative ribosomal RNA small subunit methyltransferase B
[Burkholderiales bacterium 1_1_47]
Length = 489
Score = 102 bits (255), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 16/264 (6%)
Query: 34 IQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQK 92
IQ + + L V D AL++ P +RVNTLK D + EL + V +K
Sbjct: 126 IQAEVPKWLYDKAVVQYTDHKALFEAMQQSAPLDLRVNTLKATPDEVIEELTQHGVQAEK 185
Query: 93 DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKT 152
P+ + L L P+ G V +Q + S ++A + PK G V D C+ G KT
Sbjct: 186 GQYSPECVRLNIKPALTQWPIYKEGKVDVQDEGSQLIARLVQPKRGEMVCDFCAGAGGKT 245
Query: 153 VHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE--VLHGDFLNLDPKDPAYSEV 210
+ L ALMK G+I A ++N++R+ L ++ +G +NI V+ + +L K Y ++
Sbjct: 246 LALGALMKSTGRIYAFDVNEKRLAGLTPRMRRAGLSNIHPAVIRNEH-DLRVKR-LYGKM 303
Query: 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPG 269
+L+D CSG+GT D G E L++++ QK +R A
Sbjct: 304 DRVLVDAPCSGTGTYRRNPDL---KWRFGE-------EELDRINEIQKSVIRSAAKMLKA 353
Query: 270 VERVVYSTCSIHQVENEDVIKSVL 293
R+VY+TCSI Q EN+DVI L
Sbjct: 354 GGRLVYATCSILQRENQDVINDFL 377
>gi|253575778|ref|ZP_04853113.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
oral taxon 786 str. D14]
gi|251844821|gb|EES72834.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
oral taxon 786 str. D14]
Length = 506
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 123/242 (50%), Gaps = 15/242 (6%)
Query: 55 ALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPL 113
A+ + + P VRVN K D + + +Q + + PD +++ G ++ +
Sbjct: 220 AICRANNEPPSVSVRVNRTKASRDEVLRLMEEQGLRASASPISPDGIVVHSGGNMALTSW 279
Query: 114 IVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKE 173
G + +Q ++S +VA AL P+PG VLD C+APG KT H+A +M+G+G+++A +++
Sbjct: 280 YREGLISVQDESSMLVAEALDPQPGMNVLDCCAAPGGKTCHIAEIMEGRGRVLANDIHPH 339
Query: 174 RVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL 233
+ + ++D K G N++ L GD L L + A S R ILLD CSG G + D
Sbjct: 340 KAKLIEDHAKRLGLDNVDTLSGDALQLAERLKAASFDR-ILLDVPCSGLGVIRRKPDLKW 398
Query: 234 PSHASGHTADPTEMERLNKLSAFQKKALR--HALSFPGVERVVYSTCSIHQVENEDVIKS 291
E + +++ Q+ L L PG +VYSTC+I EN +++ S
Sbjct: 399 AKKP----------EDVTEIAGVQRTLLDSVSGLLKPG-GLLVYSTCTIEPRENAEMVAS 447
Query: 292 VL 293
L
Sbjct: 448 FL 449
>gi|110803437|ref|YP_699027.1| sun protein [Clostridium perfringens SM101]
gi|110683938|gb|ABG87308.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens SM101]
Length = 442
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 18/226 (7%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNT K D D L ++ + +++ P+ +I+ G + + L G + +Q +++
Sbjct: 178 VRVNTCKADYDEVYERLEEEGYDIEEGAFSPEAIIIKKGSAIEKNKLYQEGLITVQDESA 237
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA K +V+D CSAPG K H+ LM KGK+VA +++ ++ +K+ I G
Sbjct: 238 MLVAPLFDLKDDEQVMDLCSAPGTKATHIGELMMNKGKVVAFDIHDHKLTLIKENIDRLG 297
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS-HASGHTADPT 245
N+EV GD ++ K +++ +LLD CSG G ++ P + D T
Sbjct: 298 LTNVEVELGDATKINSKYINWAD--RVLLDVPCSGLGIIRKK-----PEIKWNKKNNDLT 350
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
E+ ++ QK+ L++A ++ G E +VYSTC++++ ENE+VI
Sbjct: 351 EVVKV------QKEILKNAWNYLREGGE-LVYSTCTLNKKENEEVI 389
>gi|384175316|ref|YP_005556701.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. subtilis str. RO-NN-1]
gi|349594540|gb|AEP90727.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. subtilis str. RO-NN-1]
Length = 447
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 125/238 (52%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+K DL D + L G H NG V
Sbjct: 176 IPPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGTIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKP VLDAC+APG K+ H+A LMK KG +++ +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPDETVLDACAAPGGKSAHIAELMKNKGSVMSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY--SEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++H + ++ + + IL+D CSG G + D
Sbjct: 295 AADRLG---LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPD-------M 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + EN++VI + +
Sbjct: 345 KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENDEVIHAFI 397
>gi|229013049|ref|ZP_04170214.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
DSM 2048]
gi|228748303|gb|EEL98163.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
DSM 2048]
Length = 415
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 132 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 188
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 189 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDTVLDSCAAPGGKTTHIAERLDGTGKV 247
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSGSG
Sbjct: 248 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGSGVI 306
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 307 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 357
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 358 EQVIKQFL 365
>gi|331000980|ref|ZP_08324616.1| putative ribosomal RNA small subunit methyltransferase B
[Parasutterella excrementihominis YIT 11859]
gi|329569755|gb|EGG51519.1| putative ribosomal RNA small subunit methyltransferase B
[Parasutterella excrementihominis YIT 11859]
Length = 507
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 128/264 (48%), Gaps = 16/264 (6%)
Query: 34 IQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQK 92
IQ + + L V D AL++ P +RVNTLK D + EL + V +K
Sbjct: 144 IQAEVPKWLYDKAVVQYTDHKALFEAMQQSAPLDLRVNTLKATPDEVIEELTQHGVQAEK 203
Query: 93 DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKT 152
P+ + L L P+ G V +Q + S ++A + PK G V D C+ G KT
Sbjct: 204 GQYSPECVRLNIKPALTQWPIYKEGKVDVQDEGSQLIARLVQPKRGEMVCDFCAGAGGKT 263
Query: 153 VHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE--VLHGDFLNLDPKDPAYSEV 210
+ L ALMK G+I A ++N++R+ L ++ +G +NI V+ + +L K Y ++
Sbjct: 264 LALGALMKSTGRIYAFDVNEKRLAGLTPRMRRAGLSNIHPAVIRNEH-DLRVKR-LYGKM 321
Query: 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPG 269
+L+D CSG+GT D G E L++++ QK +R A
Sbjct: 322 DRVLVDAPCSGTGTYRRNPDL---KWRFGE-------EELDRINEIQKSVIRSAAKMLKA 371
Query: 270 VERVVYSTCSIHQVENEDVIKSVL 293
R+VY+TCSI Q EN+DVI L
Sbjct: 372 GGRLVYATCSILQRENQDVINDFL 395
>gi|367468304|ref|ZP_09468183.1| Ribosomal RNA small subunit methyltransferase B [Patulibacter sp.
I11]
gi|365816611|gb|EHN11630.1| Ribosomal RNA small subunit methyltransferase B [Patulibacter sp.
I11]
Length = 352
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 119/240 (49%), Gaps = 25/240 (10%)
Query: 55 ALYQTPDVPKPRYVRVNTLK---MDVDSA----VLELGKQFVVQKDDLVPDLLILPPGCD 107
AL + P +RVNTL+ + D A ++ G+ F DD +P+ + G D
Sbjct: 104 ALLAAGNRPTELVLRVNTLRTGPLGEDGAPAGGIVVPGEPF----DDALPEARRVTGGLD 159
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ P G + S A A+ P+PG +VLD C+APG KT H+AALM G+G IVA
Sbjct: 160 VLADPGWREGHYVAMSRGSMRAARAVDPQPGERVLDLCAAPGGKTTHMAALMGGEGTIVA 219
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
E + R R L+ T + GA N+EV+ GD L ++ ++ V LLD CSG GT A
Sbjct: 220 IEKHGGRARALRRTCERVGAGNVEVISGDALEVELAAGSFDRV---LLDAPCSGLGTLAS 276
Query: 228 RLDHLLPSHASGHTADPTEMERL-NKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
D D E+ RL +L ++A++ PG R+VYS C+++ E
Sbjct: 277 HPDLRWRVQER----DLPELGRLQGRLLEVAQRAVK-----PG-GRLVYSVCTLNPGEER 326
>gi|321315340|ref|YP_004207627.1| 16S rRNA methyltransferase B [Bacillus subtilis BSn5]
gi|320021614|gb|ADV96600.1| 16S rRNA methyltransferase B [Bacillus subtilis BSn5]
Length = 447
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+K DL D + L G H NG V
Sbjct: 176 IPPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGTIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKP VLDAC+APG K+ H+A LMK KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY--SEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++H + ++ + + IL+D CSG G + D
Sbjct: 295 AADRLG---LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPD-------M 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + EN++VI + +
Sbjct: 345 KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENDEVIHAFI 397
>gi|443245218|ref|YP_007378443.1| tRNA and rRNA cytosine-C5-methylase [Nonlabens dokdonensis DSW-6]
gi|442802617|gb|AGC78422.1| tRNA and rRNA cytosine-C5-methylase [Nonlabens dokdonensis DSW-6]
Length = 402
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 115/243 (47%), Gaps = 18/243 (7%)
Query: 65 PRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +R NTLK DV + +L ++ + + PD L+L ++ L +G +Q
Sbjct: 150 PVVLRANTLKTDVATLKEKLIAEEILTTTHERFPDALVLNERANVFRTKLFTDGFFEVQD 209
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
S ++AA L PKPG +++DAC+ G K +HLAA+M+ KG+I+A ++ + ++ LK +
Sbjct: 210 AGSQLIAAYLEPKPGERIMDACAGAGGKALHLAAMMENKGQIIATDIYQSKLNELKRRTR 269
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD---HLLPSHASGH 240
+G N+E D + K +++ IL+D CSG G D L P
Sbjct: 270 RAGVHNVETRLIDSTKVIKK--LQNKMDGILIDAPCSGLGVLRRNPDAKWKLQPEFI--E 325
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
T+ E L S K R+VY+TCSI ENE ++ L
Sbjct: 326 NIKETQQEILQSYSRVVKSG----------GRMVYATCSIFPSENEMQVEKFLKSEAGAD 375
Query: 301 FQL 303
F+L
Sbjct: 376 FEL 378
>gi|404418446|ref|ZP_11000213.1| 16S rRNA methyltransferase B [Staphylococcus arlettae CVD059]
gi|403489039|gb|EJY94617.1| 16S rRNA methyltransferase B [Staphylococcus arlettae CVD059]
Length = 435
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 83/275 (30%), Positives = 137/275 (49%), Gaps = 20/275 (7%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AI +L + LV++ V IE A+ Q+ + VRVNT + +++ + +L + F
Sbjct: 142 AIAYSLPKWLVKHWVTHFGIEKTEAMAQSFLTKVNQTVRVNTTQTTIEAVIAKLQDEGFE 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
V++D + + L + G + + +G V +Q K+S VA LAP+PG VLDACSAPG
Sbjct: 202 VEQDHDIAECLHIK-GNTIIESRIFKDGLVSIQDKSSMFVANILAPEPGDSVLDACSAPG 260
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
K H+A LM +G++ A ++++ ++ + + +NI D D Y +
Sbjct: 261 GKACHIAELMANQGQVDATDIHEHKIELINFNKRKLRLSNILSYQHD--ATQKYDKVYDK 318
Query: 210 VRAILLDPSCSGSGTAAERLD-HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 268
IL+D CSG G + + S S ++E LN ++H +
Sbjct: 319 ---ILVDAPCSGLGVLRHKPEIKYEQSQTSIQALLELQLEILNN--------IKHNVKPG 367
Query: 269 GVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQL 303
G +VYSTC++ Q+ENE+VI + L F F+L
Sbjct: 368 GT--IVYSTCTVEQLENENVIYTFLKENKDFEFEL 400
>gi|443632757|ref|ZP_21116936.1| RNA-binding Sun protein [Bacillus subtilis subsp. inaquosorum KCTC
13429]
gi|443347580|gb|ELS61638.1| RNA-binding Sun protein [Bacillus subtilis subsp. inaquosorum KCTC
13429]
Length = 447
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 123/240 (51%), Gaps = 26/240 (10%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K+D + ++ + + V+K DL D + L G H NG V
Sbjct: 176 IPPKQTLRVNQMKIDRADLLNQMAAEGIEVEKGDLAEDAVKLLKGSIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+ LM+ KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIGELMENKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYS----EVRAILLDPSCSGSGTAAERLDHLLPSH 236
G IE +D + + + IL+D CSG G + D
Sbjct: 295 AADRLGLTIIEA-----KTMDARKAGETFENGQFDRILVDAPCSGFGVIRRKPDM----- 344
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + ENE+VI + +
Sbjct: 345 --KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENEEVIHAFI 397
>gi|386758297|ref|YP_006231513.1| protein RsmB [Bacillus sp. JS]
gi|384931579|gb|AFI28257.1| RsmB [Bacillus sp. JS]
Length = 447
Score = 102 bits (254), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+K DL D + L G H NG V
Sbjct: 176 IPPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGSIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKP VLDAC+APG K+ H+A LMK KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++H + ++ + + IL+D CSG G + D
Sbjct: 295 AADRLG---LTIIHAETMDARKAGETFENEKFDRILVDAPCSGFGVIRRKPD-------M 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + EN++VI + +
Sbjct: 345 KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENDEVIHAFI 397
>gi|423483455|ref|ZP_17460145.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6X1-2]
gi|401141006|gb|EJQ48561.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6X1-2]
Length = 444
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H NG + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KNGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|333978754|ref|YP_004516699.1| N utilization substance protein B [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822235|gb|AEG14898.1| N utilization substance protein B-like protein [Desulfotomaculum
kuznetsovii DSM 6115]
Length = 453
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/280 (30%), Positives = 133/280 (47%), Gaps = 23/280 (8%)
Query: 42 LVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPD 98
LVR +K +E+ +AL Q + P P VR NTLK+ + LG++ V + P+
Sbjct: 157 LVRRWLKEYGLEETIALCQANNGPAPNTVRTNTLKISRQELMERLGEEGVTAEPTSFAPE 216
Query: 99 LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAAL 158
L + LH G +Q ++S +V AL+P PG +VLDA +APG KT HLA L
Sbjct: 217 GLKIAGFPSLHSFAPFEEGLFLVQDESSILVGHALSPLPGARVLDAAAAPGTKTTHLAQL 276
Query: 159 MKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218
M +G+I A +++ +++ + + G + + D +LD + + ILLD
Sbjct: 277 MGDRGEITALDIHPHKIKLIAANCRRLGITCVRPVEADARHLD--QSTHHQWDFILLDAP 334
Query: 219 CSGSGTAAERLD-HLLPSHASGHTADPTEMERLNKLSAFQKKALR---HALSFPGVERVV 274
CSG G R D + AS + +++ QK+ L L GV +V
Sbjct: 335 CSGLGVLRRRPDARWRKTEAS-----------IAEMAGLQKEMLEGVARCLKPGGV--LV 381
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSFGFQ-LATPFPNGTAE 313
YSTC++ + EN ++ L F + L+T P G E
Sbjct: 382 YSTCTVTREENLGQVEDFLNRHPEFQLEDLSTLLPAGLDE 421
>gi|402297531|ref|ZP_10817298.1| 16S rRNA methyltransferase B [Bacillus alcalophilus ATCC 27647]
gi|401727206|gb|EJT00399.1| 16S rRNA methyltransferase B [Bacillus alcalophilus ATCC 27647]
Length = 448
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 12/238 (5%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+RVN LK + + + L ++ V+ +K +L D LI+ G + +G Q ++S
Sbjct: 182 LRVNQLKTNQEDLMKILKEEGVLTRKGELSSDALIVEEGNAFKTNAY-RSGLFTAQDESS 240
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA AL PK G +LD+C+APG K+ H+A LM +G +++ +L++ +V+ +++ K
Sbjct: 241 MLVAKALGPKAGEHILDSCAAPGGKSTHIAELMNNEGSLLSVDLHEHKVQLIREQAKRLD 300
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ IEV+ D K PA S AILLD CSG G + D S +
Sbjct: 301 LSMIEVVAADVRAFSQKTPAQS-FDAILLDAPCSGLGVIRRKPDIKWAKKES-------D 352
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
++ + ++ A +A+ L G R+VYSTC+I Q ENE +++ + F + +
Sbjct: 353 IQDIAEIQAMILEAVAPLLKKGG--RLVYSTCTIDQEENEAIVEHFIQTHPEFQWDIT 408
>gi|332710036|ref|ZP_08429991.1| ribosomal RNA small subunit methyltransferase RsmB [Moorea
producens 3L]
gi|332351179|gb|EGJ30764.1| ribosomal RNA small subunit methyltransferase RsmB [Moorea
producens 3L]
Length = 477
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 93/332 (28%), Positives = 154/332 (46%), Gaps = 72/332 (21%)
Query: 19 PVGDAEKFLMLHK---GAIQLALAQLLVRNKVKSIEDLMALY-QTPDVPKPRYVRVNTLK 74
P GD E+ +LH I+L L QL ++ E L + Q+P + +R+N LK
Sbjct: 149 PAGDMERLGILHSFPDWMIELWLQQL----GLEETEQLCQWFNQSPTID----LRINPLK 200
Query: 75 MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVN------------------ 116
+ ++ +E G Q VP L+ + + P+ N
Sbjct: 201 VSIEE--VEAGMQSAELAIQRVPTLVSHQDEGNGEIIPMFSNPAQLPQALRIVGGVGAIQ 258
Query: 117 -------GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
G +Q ++ +V+ L P+PG V+DAC+APG KT H+A LM +GKI AC+
Sbjct: 259 ELPGFKEGWWTVQDCSAQLVSYLLDPQPGDVVIDACAAPGGKTTHIAELMADQGKIWACD 318
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAER 228
+ R+++++ + +I++ GD + P ++ V A+LLD CSG+GT R
Sbjct: 319 RSASRLKKVQQNAQRLELQSIQISTGDSRDC----PEFTNVANAVLLDAPCSGNGTLHRR 374
Query: 229 LD---HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
D + P E++ +L+ QK+ L H ++ PG +VY+TC+++
Sbjct: 375 PDIRWRMTP-------------EKVQELTVLQKELLEHTATWVKPG-GVLVYATCTLNPQ 420
Query: 284 ENEDVIKSVL---------PIAMSFGFQLATP 306
ENE VI+ L P +SF + +TP
Sbjct: 421 ENEAVIQWFLEGHSQWQIEPPTVSFLKEFSTP 452
>gi|374297158|ref|YP_005047349.1| NOL1/NOP2/sun family putative RNA methylase [Clostridium
clariflavum DSM 19732]
gi|359826652|gb|AEV69425.1| NOL1/NOP2/sun family putative RNA methylase [Clostridium
clariflavum DSM 19732]
Length = 456
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 79/233 (33%), Positives = 115/233 (49%), Gaps = 19/233 (8%)
Query: 65 PRY--VRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
PRY +RVN+LK+ V+ L++ F ++ D G + HP G ++Q
Sbjct: 29 PRYYGLRVNSLKVSVED-FLKIS-PFELEPIAWTNDGFYYREGENPGKHPYYYAGLYYIQ 86
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
++ + A + KPG VLD C+APG KTV +AA MKGKG +VA ++N ERV+ L I
Sbjct: 87 EPSAMLPGAIIDAKPGENVLDLCAAPGGKTVQMAAAMKGKGLLVANDINSERVKALVKNI 146
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+L G +N V + NL K ++ + IL+D CSG G + D A
Sbjct: 147 ELCGVSNAIVTNDSPQNLSRKFGSFFD--KILVDAPCSGEGMFRKDED----------AA 194
Query: 243 DPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
E + + S Q+ L +A PG +VYSTC+ ENE +I L
Sbjct: 195 KSWEKFKCDLCSGMQRDILSYAHEMLKPG-GYLVYSTCTFSPEENEQIIAEFL 246
>gi|331269683|ref|YP_004396175.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum BKT015925]
gi|329126233|gb|AEB76178.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum BKT015925]
Length = 443
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 121/226 (53%), Gaps = 18/226 (7%)
Query: 68 VRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVN LK D D A +L + ++ +++ + P+ +++ G + +PL +G + +Q +++
Sbjct: 181 VRVNNLKTDYDEAFNKLEEYEYSIEEGYVCPEAIVINKGKSIESNPLFEDGKITVQDESA 240
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA + + G VLD CSAPG KT H++ +M GK+ A ++++ ++ +KD K G
Sbjct: 241 MLVAPTMNVEQGDLVLDLCSAPGGKTTHISEIMNNTGKVKAFDIHENKLNLVKDNAKRLG 300
Query: 187 AANIEV--LHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
NIE L N + K+ A A+L+D CSG G ++ + +
Sbjct: 301 INNIECSKLDASKFNEELKEIA----DAVLIDVPCSGLGIIRKKPEIKYTKN-------- 348
Query: 245 TEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVI 289
ME + + QK+ +++A + V ++YSTC+I++ ENE I
Sbjct: 349 --MESVKDIVKIQKEIMKNAARYVKVGGTLLYSTCTINKKENEQNI 392
>gi|422346411|ref|ZP_16427325.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens WAL-14572]
gi|373225956|gb|EHP48283.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens WAL-14572]
Length = 442
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 18/226 (7%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNT K D D L ++ + +++ P+ +I+ G + + L G + +Q +++
Sbjct: 178 VRVNTCKADYDEVYERLEEEGYDIEEGAFSPEAIIIKKGSAIEKNKLYQEGLITVQDESA 237
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA K +V+D CSAPG K H+ LM KGK+VA +++ ++ +K+ I G
Sbjct: 238 MLVAPLFDLKGDEQVMDLCSAPGTKATHIGELMMNKGKVVAFDIHDHKLALIKENIDRLG 297
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS-HASGHTADPT 245
N+EV GD ++ K +++ +LLD CSG G ++ P + D T
Sbjct: 298 LTNVEVELGDATKINSKYINWAD--RVLLDVPCSGLGIIRKK-----PEIKWNKKNNDLT 350
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
E+ ++ QK+ L++A ++ G E +VYSTC++++ ENE+VI
Sbjct: 351 EVVKV------QKEILKNAWNYLREGGE-LVYSTCTLNKKENEEVI 389
>gi|168210626|ref|ZP_02636251.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens B str. ATCC 3626]
gi|168214218|ref|ZP_02639843.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens CPE str. F4969]
gi|168217028|ref|ZP_02642653.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens NCTC 8239]
gi|182625836|ref|ZP_02953602.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens D str. JGS1721]
gi|170711319|gb|EDT23501.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens B str. ATCC 3626]
gi|170714316|gb|EDT26498.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens CPE str. F4969]
gi|177908870|gb|EDT71362.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens D str. JGS1721]
gi|182380885|gb|EDT78364.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens NCTC 8239]
Length = 442
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 18/226 (7%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNT K D D L ++ + +++ P+ +I+ G + + L G + +Q +++
Sbjct: 178 VRVNTCKADYDEVYERLEEEGYDIEEGAFSPEAIIIKKGSAIEKNKLYQEGLITVQDESA 237
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA K +V+D CSAPG K H+ LM KGK+VA +++ ++ +K+ I G
Sbjct: 238 MLVAPLFDLKGDEQVMDLCSAPGTKATHIGELMMNKGKVVAFDIHDHKLALIKENIDRLG 297
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS-HASGHTADPT 245
N+EV GD ++ K +++ +LLD CSG G ++ P + D T
Sbjct: 298 LTNVEVELGDATKINSKYINWAD--RVLLDVPCSGLGIIRKK-----PEIKWNKKNNDLT 350
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
E+ ++ QK+ L++A ++ G E +VYSTC++++ ENE+VI
Sbjct: 351 EVVKV------QKEILKNAWNYLREGGE-LVYSTCTLNKKENEEVI 389
>gi|168207268|ref|ZP_02633273.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens E str. JGS1987]
gi|169342659|ref|ZP_02629420.2| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens C str. JGS1495]
gi|169299165|gb|EDS81235.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens C str. JGS1495]
gi|170661376|gb|EDT14059.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens E str. JGS1987]
Length = 442
Score = 102 bits (253), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 18/226 (7%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNT K D D L ++ + +++ P+ +I+ G + + L G + +Q +++
Sbjct: 178 VRVNTCKADYDEVYERLEEEGYDIEEGAFSPEAIIIKKGSAIEKNKLYQEGLITVQDESA 237
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA K +V+D CSAPG K H+ LM KGK+VA +++ ++ +K+ I G
Sbjct: 238 MLVAPLFDLKGDEQVMDLCSAPGTKATHIGELMMNKGKVVAFDIHDHKLALIKENIDRLG 297
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS-HASGHTADPT 245
N+EV GD ++ K +++ +LLD CSG G ++ P + D T
Sbjct: 298 LTNVEVELGDATKINSKYINWAD--RVLLDVPCSGLGIIRKK-----PEIKWNKKNNDLT 350
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
E+ ++ QK+ L++A ++ G E +VYSTC++++ ENE+VI
Sbjct: 351 EVVKV------QKEILKNAWNYLREGGE-LVYSTCTLNKKENEEVI 389
>gi|422874661|ref|ZP_16921146.1| 16S rRNA methyltransferase B [Clostridium perfringens F262]
gi|380304302|gb|EIA16591.1| 16S rRNA methyltransferase B [Clostridium perfringens F262]
Length = 442
Score = 102 bits (253), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 70/226 (30%), Positives = 122/226 (53%), Gaps = 18/226 (7%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNT K D D L ++ + +++ P+ +I+ G + + L G + +Q +++
Sbjct: 178 VRVNTCKADYDEVYERLEEEGYDIEEGAFSPEAIIIKKGSAIERNKLYQEGLITVQDESA 237
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA K +V+D CSAPG K H+ LM KGK+VA +++ ++ +K+ I G
Sbjct: 238 MLVAPLFDLKGDEQVMDLCSAPGTKATHIGELMMNKGKVVAFDIHDHKLALIKENIDRLG 297
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS-HASGHTADPT 245
N+EV GD ++ K +++ +LLD CSG G ++ P + D T
Sbjct: 298 LTNVEVELGDATKINSKYINWAD--RVLLDVPCSGLGIIRKK-----PEIKWNKKNNDLT 350
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
E+ ++ QK+ L++A ++ G E +VYSTC++++ ENE+VI
Sbjct: 351 EVVKV------QKEILKNAWNYLREGGE-LVYSTCTLNKKENEEVI 389
>gi|113954299|ref|YP_729912.1| sun protein [Synechococcus sp. CC9311]
gi|113881650|gb|ABI46608.1| sun protein [Synechococcus sp. CC9311]
Length = 449
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 96/298 (32%), Positives = 132/298 (44%), Gaps = 19/298 (6%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P AE+ + H + A + L K+ +A Q P P +RVN L D
Sbjct: 150 PDQSAERLALCHSLPVWFAESLLSWSGPDKAERVAVACNQVP----PLDLRVNRLCSSPD 205
Query: 79 SAVLELGKQFVVQKD-DLVPD-LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPK 136
EL V K D PD L +L P DL P G +Q +++ VA LAP+
Sbjct: 206 LVAAELAAAGVPTKPIDACPDGLQVLAPAGDLRRWPGFEQGHWSVQDRSAQGVAPLLAPR 265
Query: 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGD 196
PG ++LDAC+APG K HLA LM G+I A + + R++R+ G +I L D
Sbjct: 266 PGDRILDACAAPGGKATHLAELMGDGGEIWAVDRSAGRLKRVAANAARLGCGSIHALAAD 325
Query: 197 FLNLDPKDPAYSE-VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSA 255
NL + P + + ILLD CSG GT + D + P +E L L A
Sbjct: 326 ATNLLEQQPEWRGFFQRILLDVPCSGLGTLSRHPD-------ARWRVTPATVEELLPLQA 378
Query: 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF---QLATPFPNG 310
A+ L+ G R+VY+TC+IH EN + +L F Q P P G
Sbjct: 379 QLLAAMLPLLAPGG--RLVYATCTIHPAENLAQVNKLLQDHADFQLESEQQRWPDPEG 434
>gi|423511899|ref|ZP_17488430.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA2-1]
gi|402450160|gb|EJV81994.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA2-1]
Length = 444
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL PK G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPKKGDTVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|15920908|ref|NP_376577.1| Sun family protein [Sulfolobus tokodaii str. 7]
gi|15621692|dbj|BAB65686.1| putative RNA methyltransferase [Sulfolobus tokodaii str. 7]
Length = 370
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 91/301 (30%), Positives = 142/301 (47%), Gaps = 44/301 (14%)
Query: 2 EEARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSI--EDLMALYQT 59
+E R+ + L+P + E+ + ++AL Q V+ ++ I +D L+
Sbjct: 53 QEFLRVIKNYYYYSELYPDKEIEEIITYSLKEDKIALPQW-VKERLSYIKLDDFSKLFH- 110
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPL--IVN 116
K ++RVNTLK++V A+ L K+ F + +DD D L +
Sbjct: 111 ----KKTWIRVNTLKVNVKEAISSLMKKGFELVRDDF--DFLFQVTRFPFRISKTEEFQK 164
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G + +Q KAS V L PKP ++L+ SAPG KT + L K ++A +++++R++
Sbjct: 165 GEIVIQDKASVYVVTVLDPKPYERILEVGSAPGMKTSLIQQLTNNKAYVIALDISEKRIQ 224
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
++ ++ G N E++ D NL K EV IL+D CS SGT
Sbjct: 225 VQRELMEKMGVENYELIVADGENLPIK-----EVDKILIDAPCSNSGTI----------- 268
Query: 237 ASGHTADPTEMERLN-----KLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVI 289
ADP+ RLN KLS QK+ LR A L P VVYSTCS+ E E ++
Sbjct: 269 ----NADPSVFLRLNKNDVIKLSRLQKEILREASKLRKP----VVYSTCSLFPEEGEKIV 320
Query: 290 K 290
+
Sbjct: 321 E 321
>gi|389852328|ref|YP_006354562.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus sp. ST04]
gi|388249634|gb|AFK22487.1| nol1-nop2-sun family nucleolar protein II [Pyrococcus sp. ST04]
Length = 432
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 119/231 (51%), Gaps = 24/231 (10%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFV----VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P+ Y+RVNTLK D+D L + V DD++ L P L + G
Sbjct: 169 PQRYYIRVNTLKTDIDKVKKYLEEHGVRVALTPVDDVLKVLEYDTPITRLEWYR---KGY 225
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+Q AS+ VA L+P+PG +VLD +APG+KT H AALM+ KG+IVA + + +R+ ++
Sbjct: 226 FVIQDLASAYVAHVLSPEPGDRVLDLAAAPGSKTFHAAALMENKGEIVAVDYSYDRLMKM 285
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
K+ +K G N+ ++H D + K+ + I+LD CS SGT + P
Sbjct: 286 KERMKRLGVKNVRLVHADGQSFFDKE----KFDKIILDAPCSSSGTYRQ-----FP---- 332
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALS--FPGVERVVYSTCSIHQVENED 287
+ +++ ++ Q+ L +A+ G E + YSTCS+ ENE+
Sbjct: 333 -EVKWRFDEKKIRRVINVQRNMLLNAMRNLREGGE-MTYSTCSVRIDENEE 381
>gi|407977638|ref|ZP_11158475.1| 16S rRNA methyltransferase B [Bacillus sp. HYC-10]
gi|407415891|gb|EKF37472.1| 16S rRNA methyltransferase B [Bacillus sp. HYC-10]
Length = 447
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 80/237 (33%), Positives = 118/237 (49%), Gaps = 20/237 (8%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
VP + +RVN +K D + EL + + DL D L L G + P G V
Sbjct: 176 VPPKQTLRVNRMKTDRAALQQELMDAGIETELGDLSEDALKLMKGS-IVATPFFQEGFVT 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL P+PG V DAC+APG K+ H+A M +GKIV+ +L++ +V+ +K
Sbjct: 235 IQDESSMLVARALDPQPGEMVFDACAAPGGKSTHIAERMNDEGKIVSLDLHEHKVKLIKQ 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
K N+ + L+ AYSE IL+D CSG G + D
Sbjct: 295 AAK---RLNLTKIEAKALDARKASDAYSEASFDRILIDAPCSGFGVIRRKPDM------- 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+T P + R L+A Q+ L L PG +VYSTC++ +EN+ VI + L
Sbjct: 345 KYTKSPEDAAR---LAAIQQAILHETAPLLKPG-GTLVYSTCTMDPIENQQVIHAFL 397
>gi|11499905|ref|NP_071149.1| fmu and fmv protein [Archaeoglobus fulgidus DSM 4304]
gi|2648195|gb|AAB88932.1| fmu and fmv protein [Archaeoglobus fulgidus DSM 4304]
Length = 437
Score = 101 bits (251), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 97/309 (31%), Positives = 142/309 (45%), Gaps = 56/309 (18%)
Query: 3 EARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDV 62
E R L HP W V A + L+ GA++L A L RN
Sbjct: 135 EGRLKELSLTYFHPEWFVKYAIE-LLGEDGALKLMKANL--RNP---------------- 175
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLIL------PPGCDLHVHPLIVN 116
P YVRVN LK V+S L K V+ ++ + ++ + P D H
Sbjct: 176 --PTYVRVNELKGSVESVREYLEKNGVILEETFLDEVFRVKGYEKHPASLDWHSE----- 228
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G +Q AS V+ AL P PG V+D +APG KT H+A LM+ +G+IVA + + RVR
Sbjct: 229 GKYVIQDLASCFVSHALNPSPGDVVIDLAAAPGMKTAHMAMLMQNEGRIVAVDNSPSRVR 288
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
R++ +K G N+E+ GD + E L+D CS +G ++
Sbjct: 289 RMRSKLKQLGVKNVEIKLGDGCVFE------CEADKALVDAPCSSTG-----------NY 331
Query: 237 ASGHTADPTEMERLNKLS-AFQKKALRHALSFPGVERVVYSTCSIHQVENED-VIKS--- 291
AS T ER + + Q+K + +AL + VVY+TCSI ENE+ ++K+
Sbjct: 332 ASQPNVKWTFDERKFRATMKVQRKMIANALR--NADEVVYATCSITFEENEENLLKTGAK 389
Query: 292 VLPIAMSFG 300
+LP+ FG
Sbjct: 390 ILPLPSPFG 398
>gi|414076371|ref|YP_006995689.1| ribosomal RNA small subunit methyltransferase B [Anabaena sp. 90]
gi|413969787|gb|AFW93876.1| ribosomal RNA small subunit methyltransferase B [Anabaena sp. 90]
Length = 446
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 67/183 (36%), Positives = 90/183 (49%), Gaps = 14/183 (7%)
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
P G +Q ++ +V L P PG V+D C+APG KT H+A LM KGKI AC+
Sbjct: 229 PGFNEGWWTVQDSSAQLVGHLLDPLPGNVVIDVCAAPGGKTTHIAELMGDKGKIWACDQT 288
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
R+R+LK+ +IE+ GD NL P+ Y +L+D CSG GT
Sbjct: 289 ASRLRKLKENAHRLNLQSIEICAGDSRNL-PQ--FYDSADRVLVDAPCSGLGT------- 338
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVIK 290
+ HA + + KLS QK+ L H F V VY+TC++H ENE VI
Sbjct: 339 -MHRHADARWRQTP--DSVQKLSQLQKELLSHNAGFVKAGGVLVYATCTLHPAENEQVIT 395
Query: 291 SVL 293
L
Sbjct: 396 EFL 398
>gi|385264700|ref|ZP_10042787.1| RsmB [Bacillus sp. 5B6]
gi|385149196|gb|EIF13133.1| RsmB [Bacillus sp. 5B6]
Length = 447
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 124/238 (52%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D ++ + E+ K + DL PD + L G + NG V
Sbjct: 176 IPPKQTLRVNHIKSDRETVLNEMEKAGLEAEAGDLSPDAIKLLKGSIANT-AFFQNGRVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LM+ +G + + +L++ +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMQNEGSLTSLDLHRHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
+ G + ++ ++ A+ R IL+D CSG G + D
Sbjct: 295 GAERLG---LTIIDAQTMDARKAGEAFGAERFDRILVDAPCSGFGVIRRKPDM------- 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + R LS Q LR P V++ +VYSTC++ + ENE+V+ + +
Sbjct: 345 KYTKTPEDSRR---LSEIQLGILREIA--PLVKKGGTLVYSTCTMDRTENEEVMHAFI 397
>gi|359411381|ref|ZP_09203846.1| sun protein [Clostridium sp. DL-VIII]
gi|357170265|gb|EHI98439.1| sun protein [Clostridium sp. DL-VIII]
Length = 438
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 127/241 (52%), Gaps = 22/241 (9%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVH 111
++ L P V VRVN +K D D EL K ++ V++ + P+ + + G + +
Sbjct: 166 MLGLNAIPQVS----VRVNEIKADYDEVFEELEKLEYDVEEGVICPEAICIKGGKSIESN 221
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
PL G + +Q +++ +VA L + G KV+D CSAPG KT H+A +++ GK++A +++
Sbjct: 222 PLFKEGKITVQDESAMVVAPLLELEEGMKVIDLCSAPGGKTTHIAEMLQNTGKVLAFDIH 281
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
+ ++ +K+ + G N+E+ D L+P+ S+ IL+D CSG G ++
Sbjct: 282 ESKLGLIKENCERLGITNVEINTNDATKLNPELVESSD--RILIDVPCSGIGIIRKK--- 336
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDV 288
P T L ++ Q++ + +A + G+ +VYSTC++++ ENE+
Sbjct: 337 --PEIKWNKTRSD-----LREIIPIQREIMENAWQYLRSGGI--MVYSTCTLNKEENEEN 387
Query: 289 I 289
I
Sbjct: 388 I 388
>gi|448591436|ref|ZP_21650924.1| tRNA and rRNA cytosine-C5-methylase [Haloferax elongans ATCC
BAA-1513]
gi|445733410|gb|ELZ84979.1| tRNA and rRNA cytosine-C5-methylase [Haloferax elongans ATCC
BAA-1513]
Length = 313
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 82/256 (32%), Positives = 119/256 (46%), Gaps = 24/256 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A ++ + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFEACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG KV D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGEKVWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---------DPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K A+ E +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLAVTNQDARNFSMKPFGERNLDESGAFEEFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYST 277
S GT + D L H M + ++ QK LR A+ PG VVYST
Sbjct: 190 SCEGTCRKNPDVLDEWH----------MGHVESVAGIQKGILRRAVQVTKPG-GTVVYST 238
Query: 278 CSIHQVENEDVIKSVL 293
C+ ENE V+ VL
Sbjct: 239 CTFAPEENEAVLDFVL 254
>gi|390453286|ref|ZP_10238814.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
peoriae KCTC 3763]
Length = 471
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 131/275 (47%), Gaps = 17/275 (6%)
Query: 40 QLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLE-LGKQFVVQKDDLV 96
Q LV+ +K +E A+ Q + P VRVNT D + E L K +
Sbjct: 175 QWLVKRWIKQYGVETAEAICQANNEPPAVSVRVNTTMTSRDQLLDEMLAKGVNAVPSAVS 234
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
P +++ G ++ + +G + +Q ++S +VA A+AP+PG VLD C+APG KT H+A
Sbjct: 235 PYGIVVRSGGNMALTSWYTDGLLSVQDESSMLVAEAVAPEPGMLVLDCCAAPGGKTAHMA 294
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
LMK +G+I+A +L+ + +++ G +E + GD L L + S R ILLD
Sbjct: 295 ELMKDQGRIIANDLHAHKHHLIQEQADRLGLEAVETVTGDALELKDRYAPASFDR-ILLD 353
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEM--ERLNKLSAFQKKALRHALSFPGVERVV 274
CSG G + D L S D T++ E L+ ++ K PG +V
Sbjct: 354 APCSGFGVIRRKPD-LRWSKTEQDVRDITQLQHELLDSVAGLLK---------PG-GILV 402
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
YSTC+I ENE + L + FP+
Sbjct: 403 YSTCTIEPDENEGQLTRFLGEHSEYELAEGHSFPD 437
>gi|428279169|ref|YP_005560904.1| hypothetical protein BSNT_02587 [Bacillus subtilis subsp. natto
BEST195]
gi|291484126|dbj|BAI85201.1| hypothetical protein BSNT_02587 [Bacillus subtilis subsp. natto
BEST195]
Length = 447
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 124/238 (52%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+K DL D + L G H NG V
Sbjct: 176 IPPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGTIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKP VLDAC+APG K+ H+A LM+ KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPDETVLDACAAPGGKSAHIAELMQNKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY--SEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++H + ++ + + IL+D CSG G + D
Sbjct: 295 AADRLG---LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPD-------M 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + EN++VI + +
Sbjct: 345 KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENDEVIHAFI 397
>gi|86605784|ref|YP_474547.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
JA-3-3Ab]
gi|86554326|gb|ABC99284.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
JA-3-3Ab]
Length = 448
Score = 101 bits (251), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 115/235 (48%), Gaps = 19/235 (8%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPP-GCDLHVHPLIVNGCVFLQGKA 125
+RVN L+ DVD + L + + VP L L D+ P G +Q +
Sbjct: 190 LRVNPLRADVDKVIQALAEAGIPASPIPEVPGALRLGQHAGDITALPGFAQGWWSVQDAS 249
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ V L P+PG +V+D C+APG KT H+A M+ +G+I A + + R+RRL++ ++
Sbjct: 250 AQQVVHYLDPQPGERVIDCCAAPGGKTTHMAEQMQDRGEIWALDRHPHRLRRLEENVQRL 309
Query: 186 GAANIEVLHGDFLNLD------PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
G ++I L D L+LD P + +LLD CSG GT L HA
Sbjct: 310 GLSSIRPLAIDLLSLDAAAEPPAPLPPWQSADRVLLDAPCSGLGT--------LHRHADA 361
Query: 240 HTAD-PTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P +++ L L A + L G+ +VY+TC++H ENE VI+S L
Sbjct: 362 RWRQTPAQIQELAHLQAQLLQVAARWLKPGGL--LVYATCTLHPAENEAVIQSFL 414
>gi|167040389|ref|YP_001663374.1| sun protein [Thermoanaerobacter sp. X514]
gi|256752273|ref|ZP_05493136.1| sun protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300914473|ref|ZP_07131789.1| sun protein [Thermoanaerobacter sp. X561]
gi|307724291|ref|YP_003904042.1| sun protein [Thermoanaerobacter sp. X513]
gi|166854629|gb|ABY93038.1| sun protein [Thermoanaerobacter sp. X514]
gi|256748841|gb|EEU61882.1| sun protein [Thermoanaerobacter ethanolicus CCSD1]
gi|300889408|gb|EFK84554.1| sun protein [Thermoanaerobacter sp. X561]
gi|307581352|gb|ADN54751.1| sun protein [Thermoanaerobacter sp. X513]
Length = 444
Score = 100 bits (250), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 120/245 (48%), Gaps = 22/245 (8%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHP 112
L +L + P++ RVNTLK+D++ L + K + + + H
Sbjct: 168 LKSLNERPEIC----YRVNTLKIDIEDLKRLLDSDGIAYKKGYYLEEALYIDIKNPESHQ 223
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
L G +++Q +AS +V+ L PK G V+D C+APG KT H+A LMK GK+VA +L+
Sbjct: 224 LYKEGFIYIQDEASMLVSKILNPKEGETVIDVCAAPGGKTTHIAQLMKNNGKVVAFDLHP 283
Query: 173 ERVRRLKDTIKLSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
R+ +K+ K G N+ E F+N + A +L D C+G G ++ D
Sbjct: 284 HRLELIKENCKRLGITNVKTEAFDSTFVNKKYLEKA----DKVLADVPCTGIGIIRKKPD 339
Query: 231 HLLPSHASGHTAD--PTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDV 288
L ++ ++ T+ + L+ S + KK F +VYSTC+I + EN++V
Sbjct: 340 IKLKNYTRKEISELIETQYKILDSSSKYVKKG-----GF-----LVYSTCTIGKEENQNV 389
Query: 289 IKSVL 293
I L
Sbjct: 390 IMKFL 394
>gi|422344990|ref|ZP_16425913.1| ribosomal RNA small subunit methyltransferase B [Selenomonas noxia
F0398]
gi|355376132|gb|EHG23393.1| ribosomal RNA small subunit methyltransferase B [Selenomonas noxia
F0398]
Length = 448
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 131/274 (47%), Gaps = 16/274 (5%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLH 109
E AL + + P VR NTL + + + V + VP+ +IL L+
Sbjct: 171 ERAEALCRCNNTSAPLSVRTNTLCISRTQLIEKFETAGVKARTSAWVPEGVILRAHGALN 230
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
V + G +QG++S +VA LAP+PG V+DAC+APG KT H+A M+ +G+I+A +
Sbjct: 231 VLAPLHEGLAQVQGESSMLVAHVLAPEPGMTVIDACAAPGGKTTHIAQRMENRGRILAFD 290
Query: 170 LNKERVRRLKDTIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+ +E++RR++ K + IE VL + + K+ A +L+D CSG G
Sbjct: 291 IYEEKIRRIERNAKRLSVSIIETAVLDAREIGVHYKEQADR----VLVDAPCSGLGVLRR 346
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENED 287
+ D AS P ++R SA Q A+ GV +VYSTC++ EN
Sbjct: 347 KPDARWRKSASDRKTLPP-LQREILASAAQ------AVRKGGV--LVYSTCTMEDCENTA 397
Query: 288 VIKSVLPIAMSFGFQLATPFPNGTAEASQFLKAL 321
V++ L F + F G A Q ++ +
Sbjct: 398 VVEHFLKTHPDFSLEETGAFLPGKKRAEQMVQIM 431
>gi|323352513|gb|EGA85013.1| YNL022C-like protein [Saccharomyces cerevisiae VL3]
Length = 341
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 29/236 (12%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDL-MALYQTPDVPKPRYVRVNTLKM-- 75
P+ D +++ K + + +L ++ KV+ + +L ++ + D+P R++R+N LK
Sbjct: 109 PIKD---YVLKFKSPLHSEMVKLKLKLKVRELSELVLSEDISNDLPPVRWIRINPLKCHP 165
Query: 76 --DVDSAVLELGKQFVVQ-------------KDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+ + + EL K+F ++ D+ +P+L + P + H L +G +
Sbjct: 166 NGETEPVLAELRKKFTLKVDKWSELVPGSIYYDEFIPNLFGIHPSDKITAHELYKHGKII 225
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM------KGKGKIVACELNKER 174
+Q +AS A L P P V+D+CSAPGNKT H + + +I A E + ER
Sbjct: 226 IQDRASCFPAHILNPGPSDIVIDSCSAPGNKTTHTXSYIYPEPPKDNNTRIYAFEKDPER 285
Query: 175 VRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ L+ IK++G + NI V GDF L + Y +V ++DPSCSGSG +
Sbjct: 286 AKVLQKMIKIAGCSPNISVNVGDFTKLATPE-KYKDVTCFIVDPSCSGSGIFGRKF 340
>gi|336469849|gb|EGO58011.1| hypothetical protein NEUTE1DRAFT_63451 [Neurospora tetrasperma FGSC
2508]
Length = 655
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 68/191 (35%), Positives = 97/191 (50%), Gaps = 32/191 (16%)
Query: 65 PRYVRVNTLKMDVD----------------SAVLELGKQF---------VVQKDDLVPDL 99
PR++RVNTLK V+ + V++ F V+ D +P+L
Sbjct: 144 PRWIRVNTLKSTVEEQLATTFKGWEVVESVAEVIKAADAFDGQGKKGKKVIHIDGHIPNL 203
Query: 100 LILPPG-CDLHVHPLIVNGCVFLQGKASSMVAAALAPKP--GWKVLDACSAPGNKTVHLA 156
+ PG D +G + LQ KAS A L P+P V+D C+APGNKT HLA
Sbjct: 204 IAACPGVADFTKTEAYKSGKIILQDKASCFPAYLLDPRPERDGDVMDTCAAPGNKTTHLA 263
Query: 157 ALMKGKGK--IVACELNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSEVRA 212
A++ +G I A E + R + L+ +K +G+ V++ DFL ++P D Y V A
Sbjct: 264 AIVHSRGTTTIFAFEKDPHRAKTLQKMVKTAGSDTFTVVNAGKDFLKVNPSDAKYRNVGA 323
Query: 213 ILLDPSCSGSG 223
+LLDPSCSGSG
Sbjct: 324 LLLDPSCSGSG 334
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
R+ L++FQ L+HA+SFP +R+ YSTCSIH ENE+V+
Sbjct: 413 RIASLASFQLTLLQHAMSFPAAKRITYSTCSIHAGENENVV 453
>gi|83312882|ref|YP_423146.1| tRNA and rRNA cytosine-C5-methylase [Magnetospirillum magneticum
AMB-1]
gi|82947723|dbj|BAE52587.1| tRNA and rRNA cytosine-C5-methylase [Magnetospirillum magneticum
AMB-1]
Length = 428
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 76/232 (32%), Positives = 119/232 (51%), Gaps = 14/232 (6%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +RVNTLK D A+ L K+ + + L P L L L NG + +Q
Sbjct: 156 PLDLRVNTLKATRDEAIRALAKEGIKAEPTALSPIGLRLGARVPLVQVQAWRNGLIEVQD 215
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
+ S +VA PKPG V+D C+ G KT+ LAA M+ KG++VAC++ + RV R +D ++
Sbjct: 216 EGSQLVALLTDPKPGQAVVDYCAGAGGKTLALAAAMQNKGRLVACDVAEWRVDRAQDRLR 275
Query: 184 LSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
+G N+ V+ G+ + + +L+D C+G+GT D A
Sbjct: 276 RAGVHNVTRRVIEGESDKWIKR--SAGSFDRVLVDAPCTGTGTWRRNPD------AKWQF 327
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
++ +E + + A A R L+ PG R++Y+TCSI + ENED I++ L
Sbjct: 328 SETDLLELVARQGAILDSAAR--LTKPG-GRLIYATCSIMREENEDRIEAFL 376
>gi|110800441|ref|YP_696427.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens ATCC 13124]
gi|110675088|gb|ABG84075.1| ribosomal RNA small subunit methyltransferase B [Clostridium
perfringens ATCC 13124]
Length = 442
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/226 (30%), Positives = 122/226 (53%), Gaps = 18/226 (7%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNT K D D L ++ + +++ P+ +I+ G + + L G + +Q +++
Sbjct: 178 VRVNTCKADYDEVYERLEEEGYDIEEGAFSPEAIIIKKGSAIEKNKLYQEGLITVQDESA 237
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA + +V+D CSAPG K H+ LM KGK+VA +++ ++ +K+ I G
Sbjct: 238 MLVAPLFDLRGDEQVMDLCSAPGTKATHIGELMMNKGKVVAFDIHDHKLALIKENIDRLG 297
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS-HASGHTADPT 245
N+EV GD ++ K +++ +LLD CSG G ++ P + D T
Sbjct: 298 LTNVEVELGDATKINSKYINWAD--RVLLDVPCSGLGIIRKK-----PEIKWNKKNNDLT 350
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
E+ ++ QK+ L++A ++ G E +VYSTC++++ ENE+VI
Sbjct: 351 EVVKV------QKEILKNAWNYLREGGE-LVYSTCTLNKKENEEVI 389
>gi|350290471|gb|EGZ71685.1| S-adenosyl-L-methionine-dependent methyltransferase [Neurospora
tetrasperma FGSC 2509]
Length = 690
Score = 100 bits (250), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 69/194 (35%), Positives = 98/194 (50%), Gaps = 35/194 (18%)
Query: 65 PRYVRVNTLKMDVD----------------SAVLELGKQF---------VVQKDDLVPDL 99
PR++RVNTLK V+ + V++ F V+ D +P+L
Sbjct: 144 PRWIRVNTLKSTVEEQLATTFKGWEVVESVAEVIKAADAFDGQGKKGKKVIHIDGHIPNL 203
Query: 100 LILPPG-CDLHVHPLIVNGCVFLQGKASSMVAAALAPKP--GWKVLDACSAPGNKTVHLA 156
+ PG D +G + LQ KAS A L P+P V+D C+APGNKT HLA
Sbjct: 204 IAACPGVADFTKTEAYKSGKIILQDKASCFPAYLLDPRPERDGDVMDTCAAPGNKTTHLA 263
Query: 157 ALMKGKGK-----IVACELNKERVRRLKDTIKLSGAANIEVLHG--DFLNLDPKDPAYSE 209
A+ KG+ + I A E + R + L+ +K +G+ V++ DFL ++P D Y
Sbjct: 264 AIKKGEEQKGTTTIFAFEKDPHRAKTLQKMVKTAGSDTFTVVNAGKDFLKVNPSDAKYRN 323
Query: 210 VRAILLDPSCSGSG 223
V A+LLDPSCSGSG
Sbjct: 324 VGALLLDPSCSGSG 337
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/41 (53%), Positives = 31/41 (75%)
Query: 249 RLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
R+ L++FQ L+HA+SFP +R+ YSTCSIH ENE+V+
Sbjct: 416 RIASLASFQLTLLQHAMSFPAAKRITYSTCSIHAGENENVV 456
>gi|375309204|ref|ZP_09774485.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus sp.
Aloe-11]
gi|375078513|gb|EHS56740.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus sp.
Aloe-11]
Length = 471
Score = 100 bits (250), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 86/279 (30%), Positives = 134/279 (48%), Gaps = 25/279 (8%)
Query: 40 QLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP 97
Q LV+ +K +E A+ Q + P VRVNT D + E+ + V D VP
Sbjct: 175 QWLVKRWIKQYGVETAEAICQADNEPPTVSVRVNTTMTSRDQLLDEMLAKGV----DAVP 230
Query: 98 DL-----LILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKT 152
+ +++ G ++ + +G + +Q ++S +VA A+AP+PG VLD C+APG KT
Sbjct: 231 SVVSPYGIVVRSGGNMALTSWYTDGLLSVQDESSMLVAEAVAPEPGMLVLDCCAAPGGKT 290
Query: 153 VHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212
H+A LMK +G+I+A +L+ + +++ G +E + GD L L + S R
Sbjct: 291 AHMAELMKDQGRIIANDLHAHKHHLIQEQADRLGLDAVETVTGDALELKDRYAPASFDR- 349
Query: 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM--ERLNKLSAFQKKALRHALSFPGV 270
ILLD CSG G + D L S D T++ E L+ ++ K PG
Sbjct: 350 ILLDAPCSGFGVIRRKPD-LRWSKTEQDVRDITQLQYELLDSVAGLLK---------PG- 398
Query: 271 ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
+VYSTC+I ENE + L + FP+
Sbjct: 399 GILVYSTCTIEPDENEGQLTRFLSEHPEYELAEGHAFPD 437
>gi|397905926|ref|ZP_10506759.1| Ribosomal RNA small subunit methyltransferase B [Caloramator
australicus RC3]
gi|397161029|emb|CCJ34094.1| Ribosomal RNA small subunit methyltransferase B [Caloramator
australicus RC3]
Length = 314
Score = 100 bits (249), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 80/238 (33%), Positives = 126/238 (52%), Gaps = 16/238 (6%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLV--PDLLILPPGCDLHVHPL 113
LY D K +RVNTLK D+ S +++ K+ ++ + + + LIL + + L
Sbjct: 32 LYGISD-KKLTTLRVNTLKYDIKS-LMDFFKEVNIKFERVKWNENALILKNADERDIEKL 89
Query: 114 IV--NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
+ G ++LQ +S + L PK G KVLD +APG+KT +AA+MK G I+A E +
Sbjct: 90 NIFKEGQIYLQNLSSMIPPIILDPKEGEKVLDVAAAPGSKTTQMAAMMKNMGFILANEAD 149
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
K R RLK +KL G EV G + + P + + +LLD CSG G + +
Sbjct: 150 KIRAERLKYNLKLQGVEIAEVRVGKGEKIGEEYPEFFD--KVLLDVPCSGEGIISIK--- 204
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
P G + E+ERL++L ++ AL G+ +VYSTC++++ ENE++I
Sbjct: 205 -DPKTYRGWSL--KEVERLSRLQKKLFESAYKALKKGGI--MVYSTCTLNRKENEEII 257
>gi|167037728|ref|YP_001665306.1| sun protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320116143|ref|YP_004186302.1| sun protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
gi|166856562|gb|ABY94970.1| sun protein [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929234|gb|ADV79919.1| sun protein [Thermoanaerobacter brockii subsp. finnii Ako-1]
Length = 444
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/229 (31%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 69 RVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
RVNTLK+D++ L + K + + + H L G +++Q +AS +
Sbjct: 180 RVNTLKIDIEDLKRLLDSDGIAYKKGYYLEEALYIYIKNPESHQLYKEGFIYIQDEASML 239
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
V+ L PK G V+D C+APG KT H+A LMK GK+VA +L+ R+ +K+ K G
Sbjct: 240 VSKILNPKEGETVIDVCAAPGGKTTHIAQLMKNNGKVVAFDLHPHRLELIKENCKRLGIT 299
Query: 189 NI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD--P 244
N+ E F+N + A +L D C+G G ++ D L ++ ++
Sbjct: 300 NVKTEAFDSTFVNKKYLEKA----DKVLADVPCTGIGIIRKKPDIKLKNYTRKEISELIE 355
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
T+ + L+ S + KK F +VYSTC+I + EN++VI L
Sbjct: 356 TQYKILDSSSKYVKKG-----GF-----LVYSTCTIGKEENQNVIMKFL 394
>gi|337284681|ref|YP_004624155.1| fmu protein [Pyrococcus yayanosii CH1]
gi|334900615|gb|AEH24883.1| fmu protein [Pyrococcus yayanosii CH1]
Length = 451
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 125/254 (49%), Gaps = 20/254 (7%)
Query: 68 VRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+RVNTLK V+ V L GK+ VV + P ++ L D L G + +Q +
Sbjct: 188 IRVNTLKAGVEEVVEVLRNEGKEVVVSEK--APTVVKLKGPYDFDSSSLFRKGKIIVQEE 245
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS++ + L PKPG V+D +APG KT HLA LMK KGKI A ++++ R+RR+K+ +K
Sbjct: 246 ASAVASLVLDPKPGEVVVDMAAAPGGKTTHLAELMKNKGKIYAFDIDEARMRRMKEFLKR 305
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
G ++ + D P+ +LLD C+ SGT + + +
Sbjct: 306 MGIRIVKPIKKDARKA-PEILGEEVADKVLLDAPCTSSGTIGKNPELRWRLREA------ 358
Query: 245 TEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF- 301
++ ++ Q++ L A PG R++Y+TCS+ E+E+ +K L F
Sbjct: 359 ----KIREMVELQRELLDAAARLLKPG-GRLLYTTCSVFLEEDEENVKWFLEKHEDFRLV 413
Query: 302 QLATPFPNGTAEAS 315
L+ P+ G E +
Sbjct: 414 PLSGPYDQGFLEGT 427
>gi|398310669|ref|ZP_10514143.1| 16S rRNA methyltransferase B [Bacillus mojavensis RO-H-1]
Length = 447
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 123/240 (51%), Gaps = 26/240 (10%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + +K DL D + L G H G V
Sbjct: 176 IPPKQTLRVNQMKTDRAEILDQMAAEGIEAEKGDLAEDAVKLVKGTIAGTH-FFQTGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LM+ KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYS----EVRAILLDPSCSGSGTAAERLDHLLPSH 236
+ G + I D +D + + + IL+D CSG G + D
Sbjct: 295 ASERLGLSII-----DAKTMDARKAGETFESEQFDRILVDAPCSGFGVIRRKPDM----- 344
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + ENE+VI + +
Sbjct: 345 --KYTKTPNDSSRLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENEEVIHAFI 397
>gi|357059538|ref|ZP_09120380.1| ribosomal RNA small subunit methyltransferase B [Selenomonas
infelix ATCC 43532]
gi|355371615|gb|EHG18959.1| ribosomal RNA small subunit methyltransferase B [Selenomonas
infelix ATCC 43532]
Length = 448
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 126/271 (46%), Gaps = 48/271 (17%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILPPGCDLHVHP 112
L + + P VRVNTL+ + D+ + +L G Q V+ VPD ++L L
Sbjct: 176 LCRCNNTSAPLSVRVNTLRTNRDALMEQLTAAGAQ--VRASAWVPDGIVLAAHGALDELA 233
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
+ G +Q ++S +VA L +PG V+DAC+APG KT H+A M+ +G+I+A ++ +
Sbjct: 234 PLREGLAQVQDESSMLVAHILGAEPGMTVIDACAAPGGKTTHIAQRMENRGRILAFDIYE 293
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE-VRAILLDPSCSGSGTAAERLDH 231
E++RR++ K G + IE D + AY+E +L+D CSG G + D
Sbjct: 294 EKMRRIERNAKRLGISMIETQMRDAREI---GAAYAEQADRVLVDAPCSGLGVLRRKPD- 349
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---------------VVYS 276
A KK++R A + P ++R +VYS
Sbjct: 350 -----------------------ARWKKSVRDAKTLPSLQRDILASAARAVKHGGILVYS 386
Query: 277 TCSIHQVENEDVIKSVLPIAMSFGFQLATPF 307
TC++ + EN V+++ L F + F
Sbjct: 387 TCTMEECENAAVVRAFLETHADFALEETGAF 417
>gi|406898154|gb|EKD41861.1| RNA methylase, NOL1/NOP2/sun family, partial [uncultured bacterium]
Length = 348
Score = 100 bits (249), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 132/276 (47%), Gaps = 27/276 (9%)
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGC--DLHVHPLIVNGCVF 120
+P RVNTLK + V L ++ + + + +P+ ++ G L G ++
Sbjct: 69 QPITGRVNTLKSSIKDVVKSLAQERIEIVSSNEIPEAFVVIKGNFKKLTDTDCYQKGWIY 128
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
LQ +S + L PKPG +VLD C++PG KT +AALM+ +G+++ACE + R RL+
Sbjct: 129 LQSLSSQIPPFVLDPKPGDRVLDMCASPGGKTTQMAALMQNQGEMLACEPEQRRFERLES 188
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+K GA+ + + D L L+ + + ILLD CS GT LL
Sbjct: 189 NVKKQGASIVRCIRLDALKLNLEQNGLFD--KILLDAPCSSEGT------FLLNEPP--- 237
Query: 241 TADPTEMERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENEDVIK--------- 290
T + + K +A QK+ L+ A+ +VYSTC++ ENE V+
Sbjct: 238 TWQHWSLGFIEKQAALQKRFLQKAIELLKEGGTLVYSTCALSPEENEGVLDFIVTNFPEM 297
Query: 291 SVLPIAMSFGFQLATPFPN--GTAEASQFLKALSIY 324
+++ IA F F L P G A + Q +A IY
Sbjct: 298 NLIEIASKFNF-LKPPLTQWGGQAFSPQVSQARRIY 332
>gi|401825209|ref|XP_003886700.1| tRNA/rRNA cytosine-C5-methylase [Encephalitozoon hellem ATCC 50504]
gi|395459845|gb|AFM97719.1| tRNA/rRNA cytosine-C5-methylase [Encephalitozoon hellem ATCC 50504]
Length = 305
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/236 (32%), Positives = 117/236 (49%), Gaps = 24/236 (10%)
Query: 64 KPRYVRVNTL-KMDVDSAVLELGKQFVVQKDDLV---PDLLILPPGCDLHVHPLIVNGCV 119
+P +R+NTL K D + L G+ V DDL +I + P + G
Sbjct: 32 RPTTIRINTLLKRRKDVSKLLRGRG--VDLDDLSWIDSGCVIFKSSVPIGATPEYLAGYY 89
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
LQG AS + + K G V+D C+APG KT H+AALM+ G I A ++N+ER+ LK
Sbjct: 90 CLQGAASMLPVLNMELKEGLSVVDLCAAPGGKTTHIAALMENTGVIYANDVNEERIAGLK 149
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
I+ G N V +N+D + +V +LLD CSG+G ++ PS +
Sbjct: 150 SNIQRMGVRNCIV-----MNMDGRKVNVGKVDRVLLDAPCSGTGVISKD-----PSVKTS 199
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
T +++++ QK+ + H PG +VYSTCS+ ENE+V+ +L
Sbjct: 200 RTK-----SEIDRMATLQKELILHGFDMLRPG-GILVYSTCSVLVKENEEVVNYLL 249
>gi|414160518|ref|ZP_11416784.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
simulans ACS-120-V-Sch1]
gi|410878038|gb|EKS25927.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
simulans ACS-120-V-Sch1]
Length = 434
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 149/305 (48%), Gaps = 36/305 (11%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AI +L + +V++ V +E A+ Q+ + VRVNT + ++ A++ L K+ +
Sbjct: 141 AIMYSLPKWIVKHWVTHFGLETTEAIAQSLLERPGQTVRVNTHRTTIEDAIVRLEKEDYE 200
Query: 90 VQKDDLVPDLLILPPGCDLHV--HPLIV-----NGCVFLQGKASSMVAAALAPKPGWKVL 142
V +D + C LHV P++ +G V +Q K+S VA LAP G +L
Sbjct: 201 VSQDKDIH-------YC-LHVSGRPVVESRAFKDGYVSIQDKSSMFVAEILAPVEGENIL 252
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K A L+KG G + A ++++ ++ ++ I+ N+ D P
Sbjct: 253 DACSAPGGKACQTAELLKGSGHVDATDIHEHKIDLIEHNIRKLRLKNVTAFQHDATK--P 310
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + + +T +P ++ L L ++
Sbjct: 311 YDAKYDK---ILVDAPCSGLGVLRHKPE-------IKYTQNPETVDGLVDLQLEIMNNIK 360
Query: 263 HALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLKAL 321
++ GV +VYSTC+I Q+ENE+VI + L F F+ PFP+ T E + L+ L
Sbjct: 361 DSVKPGGV--IVYSTCTIEQMENENVIYTFLKQNKDFEFE---PFPHPRTGEEVKTLQIL 415
Query: 322 SIYFE 326
F+
Sbjct: 416 PQDFD 420
>gi|23016738|ref|ZP_00056491.1| COG0144: tRNA and rRNA cytosine-C5-methylases [Magnetospirillum
magnetotacticum MS-1]
Length = 455
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/232 (33%), Positives = 119/232 (51%), Gaps = 14/232 (6%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +RVNTLK + A+ L K+ + Q L P L L L NG + +Q
Sbjct: 183 PLDLRVNTLKATREEAIRALAKEGIKSQPTALSPIGLRLGTRVPLVQVQAWRNGLIEVQD 242
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
+ S +VA PKPG V+D C+ G KT+ LAA M+ KG++VAC++ + RV R +D ++
Sbjct: 243 EGSQLVALLTDPKPGQAVVDYCAGAGGKTLALAAAMQNKGRLVACDVAEWRVDRAQDRLR 302
Query: 184 LSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
+G N+ V+ G+ + A + +L+D C+G+GT D A
Sbjct: 303 RAGVHNVTRRVIEGESDKWIKRSAASFD--RVLVDAPCTGTGTWRRNPD------AKWQF 354
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ E + + A + A R L+ PG R+VY+TCSI + ENED I++ L
Sbjct: 355 GETDLEELVVRQGAILESAAR--LTKPG-GRLVYATCSIMREENEDRIEAFL 403
>gi|150390542|ref|YP_001320591.1| sun protein [Alkaliphilus metalliredigens QYMF]
gi|149950404|gb|ABR48932.1| sun protein [Alkaliphilus metalliredigens QYMF]
Length = 444
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 20/253 (7%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVH 111
L A + PD+ YVRVNTLK+ ++ + L K V++ + + L + +
Sbjct: 170 LKANNERPDL----YVRVNTLKISIEDCITALREKGITVEQSPYIEEALKVKGIHTIEKL 225
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
L + G +++Q +S +VA + P PG ++D CSAPG K HLA LM +G++VA +++
Sbjct: 226 DLYLKGQIYIQDFSSMLVARIMDPHPGALIMDVCSAPGGKATHLAQLMGNQGEVVARDVH 285
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
+ +++ +K+ +K G I+ D LDP +L+D CSG G + +
Sbjct: 286 EHKLKLIKENVKRLGVKIIKTEVFDAKELDP--TMLQRADGVLIDAPCSGLGIIRRKPE- 342
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
+ E + +L Q + L H + PG +VYSTC+I EN VI
Sbjct: 343 ---------IKYRKKQEDIKELQQLQIEILNHGAEYVKPG-GTLVYSTCTIDPRENHHVI 392
Query: 290 KSVLPIAMSFGFQ 302
K L F +
Sbjct: 393 KQFLKENNEFELE 405
>gi|308173537|ref|YP_003920242.1| RNA-binding protein [Bacillus amyloliquefaciens DSM 7]
gi|384159442|ref|YP_005541515.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens TA208]
gi|384164123|ref|YP_005545502.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens LL3]
gi|384168489|ref|YP_005549867.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens XH7]
gi|307606401|emb|CBI42772.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens DSM 7]
gi|328553530|gb|AEB24022.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens TA208]
gi|328911678|gb|AEB63274.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens LL3]
gi|341827768|gb|AEK89019.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens XH7]
Length = 447
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
VP + +RVN +K D ++ + E+ + DL PD + L G + NG V
Sbjct: 176 VPPKQTLRVNRIKADKETLLNEMENAGLEAEAGDLSPDAIKLLKGS-IASTEFFQNGQVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LMK +G + + +L++ +V+ +++
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMKNEGSLTSLDLHRHKVKLIQE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
+ G + ++ ++ A+ R IL+D CSG G + D
Sbjct: 295 GAERLG---LTIIDAQTMDARKAGDAFGAERFDRILVDAPCSGFGVIRRKPDM------- 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + R LS Q LR P V++ +VYSTC++ + ENE+V+ + +
Sbjct: 345 KYTKTPEDSRR---LSEIQLGILREIA--PLVKKGGTLVYSTCTMDRTENEEVMHAFI 397
>gi|398304097|ref|ZP_10507683.1| 16S rRNA methyltransferase B [Bacillus vallismortis DV1-F-3]
Length = 447
Score = 100 bits (249), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 122/240 (50%), Gaps = 26/240 (10%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + V+K DL D + L G H +NG V
Sbjct: 176 IPPKQTLRVNQMKADRAELLDQMAADGIEVEKGDLADDAVKLLKGTIAGTH-FFLNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+ LM+ KG I + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIGELMENKGSISSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYS----EVRAILLDPSCSGSGTAAERLDHLLPSH 236
G I D +D + + + +L+D CSG G + D
Sbjct: 295 AADRLGLTII-----DAQEMDARKAGETFENEQFDRVLVDAPCSGFGVIRRKPD------ 343
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + ENE+VI + +
Sbjct: 344 -MKYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENEEVIHAFI 397
>gi|57641870|ref|YP_184348.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus kodakarensis KOD1]
gi|57160194|dbj|BAD86124.1| tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family [Thermococcus
kodakarensis KOD1]
Length = 450
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 120/238 (50%), Gaps = 29/238 (12%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQ 122
P +RVN L+ V+ L K+ V ++ + V ++ IL P + L G Q
Sbjct: 179 PTSIRVNRLRTSVEEVENYLRKKGVRFERSERVNTVIRILDP---FNPEWLFNKGYAIAQ 235
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS++ + LAPKPG V+D +APG KT H+A LM+ +GKI A +++ R++R+K+ +
Sbjct: 236 EEASAVASLVLAPKPGETVVDLAAAPGGKTAHMAELMENRGKIYAFDVDSARIKRMKEVL 295
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
K +G EV+ D N P+ +LLD C+ GT A+
Sbjct: 296 KRTGVEIAEVIKADGRN-APELLGEEIADRVLLDAPCTSDGTIAK--------------- 339
Query: 243 DPTEMERLN-----KLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+P RL K+ A QK+ + A PG R++YSTCS+ ENE+V+K L
Sbjct: 340 NPELRWRLREKNIPKVVALQKELMESAWKLLKPG-GRLLYSTCSMLPEENEEVVKWFL 396
>gi|14521455|ref|NP_126931.1| proliferating-cell nucleolar antigen P120, [Pyrococcus abyssi GE5]
gi|5458674|emb|CAB50161.1| Sun/NOL1/NOP2 nucleolar protein [Pyrococcus abyssi GE5]
gi|380742059|tpe|CCE70693.1| TPA: proliferating-cell nucleolar antigen P120, putative
[Pyrococcus abyssi GE5]
Length = 449
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/252 (30%), Positives = 125/252 (49%), Gaps = 16/252 (6%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNTLK +V+ + EL V V + + VP +L + + G + +Q +AS
Sbjct: 189 VRVNTLKANVEEVIEELRNDGVEVVRSERVPTILKIKGPYNFDSSKAFNKGKIIVQEEAS 248
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
++ + L P+PG ++D +APG KT HLA LMK KGKI A +++K R++RLK+ + G
Sbjct: 249 AVASLILNPQPGEVIVDLAAAPGGKTTHLAELMKNKGKIYAFDIDKTRMKRLKEFVNRMG 308
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
++ + D P+ +LLD C+ SGT + + S
Sbjct: 309 IKIVKPIIKDGRKA-PEILGEEIADRVLLDAPCTSSGTIGKNPELRWRLRES-------- 359
Query: 247 MERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-QL 303
++ +++ Q++ L A L PG ++Y+TCS+ ENE+ +K L F L
Sbjct: 360 --KIKEMAQLQRELLESAAKLVKPG-GLLLYTTCSLFTEENEENVKWFLNNHQEFKLVHL 416
Query: 304 ATPFPNGTAEAS 315
+P+ G E +
Sbjct: 417 NSPYDPGFLEGT 428
>gi|288931958|ref|YP_003436018.1| RNA methylase, NOL1/NOP2/sun family [Ferroglobus placidus DSM
10642]
gi|288894206|gb|ADC65743.1| RNA methylase, NOL1/NOP2/sun family [Ferroglobus placidus DSM
10642]
Length = 446
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 128/252 (50%), Gaps = 24/252 (9%)
Query: 48 KSIEDLM-ALYQTPDVPKPRYVRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILP 103
+ +EDL+ AL P + VRVNTLK V+ V L GK+ + ++VP +L
Sbjct: 167 EELEDLLKALNTEPKIS----VRVNTLKARVEEVVKALEKEGKEVTIS--EVVPTVLKFD 220
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
D L G +Q +AS++ + L PKPG V+D C+APG KT+H+A LMK +G
Sbjct: 221 GPYDFDRSKLYRKGKFVIQEEASALASILLDPKPGEVVVDLCAAPGGKTLHMAELMKNRG 280
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
I A ++++ R++R+++ I+ G +++ D K S ++LD C+ G
Sbjct: 281 VIHAFDIDELRLKRMEELIERCGIRIVKIYKKD-ARKATKILGESVADKVMLDAPCTSDG 339
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIH 281
T + + E++ +L+ Q + L A+ PG RV+Y TCS+
Sbjct: 340 TLMK----------NPELRWRIREEKIEELAELQYELLNVAVDLLKPG-GRVLYCTCSMF 388
Query: 282 QVENEDVIKSVL 293
+ ENE V++ +L
Sbjct: 389 KEENEGVVERIL 400
>gi|448576136|ref|ZP_21642179.1| tRNA and rRNA cytosine-C5-methylase [Haloferax larsenii JCM 13917]
gi|445729816|gb|ELZ81410.1| tRNA and rRNA cytosine-C5-methylase [Haloferax larsenii JCM 13917]
Length = 313
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 119/256 (46%), Gaps = 24/256 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A ++ + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFEACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG KV D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGEKVWDTCAAPGSKTTQIAAMMDDQGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---------DPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K ++ E +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLAVTNQDARNFSMKPFGERNLDESGSFEEFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYST 277
S GT + D L H M + ++ QK LR A+ PG VVYST
Sbjct: 190 SCEGTCRKNPDVLDEWH----------MGHVESVAGIQKGILRRAVQVTKPG-GTVVYST 238
Query: 278 CSIHQVENEDVIKSVL 293
C+ ENE V+ VL
Sbjct: 239 CTFAPEENEAVLDFVL 254
>gi|423558572|ref|ZP_17534874.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MC67]
gi|401191840|gb|EJQ98862.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MC67]
Length = 444
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 161 LETAEKMCEINMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|169827064|ref|YP_001697222.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
sphaericus C3-41]
gi|168991552|gb|ACA39092.1| Ribosomal RNA small subunit methyltransferase B [Lysinibacillus
sphaericus C3-41]
Length = 453
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/296 (28%), Positives = 135/296 (45%), Gaps = 49/296 (16%)
Query: 6 RIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKP 65
R+ + T+ HP+W L Q V N +E + +VP
Sbjct: 148 RLAIETS--HPIW-------------------LVQRFVNNY--GLEVATGMLHENNVPPI 184
Query: 66 RYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+ VRVNT K+ V+ A+ EL ++ ++ D++P+ L + G + G + +Q +
Sbjct: 185 QTVRVNTTKVTVEQAMAELEEEGLTAKQSDVIPECLHVTNGQPARTNAF-KEGHITIQDE 243
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
+S + A L P PG +VLD C+APG KT HLA +MK +G I+A +L+ ++ D I
Sbjct: 244 SSMIPANVLKPSPGMRVLDMCAAPGGKTTHLAEIMKNEGSILATDLHPHKL----DLID- 298
Query: 185 SGAANIEVLHGDFLNLDPKD----PAYSEVR---AILLDPSCSGSGTAAERLDHLLPSHA 237
N E L D + P D P + + AIL+D CSG G + D
Sbjct: 299 ---HNTERLGLDIIETAPIDGRKAPEFLQAESYDAILVDAPCSGLGVMRRKPD------- 348
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+T ++E L + A L G ++VYSTC++ + ENE + + L
Sbjct: 349 IKYTKREEDLENLQTIQLALLDAATKVLKIKG--KLVYSTCTVDKQENEGTVNAFL 402
>gi|14520982|ref|NP_126457.1| nucleolar protein [Pyrococcus abyssi GE5]
gi|5458199|emb|CAB49688.1| Nucleolar protein from the nop2 family [Pyrococcus abyssi GE5]
gi|380741536|tpe|CCE70170.1| TPA: nucleolar protein [Pyrococcus abyssi GE5]
Length = 311
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 18/247 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E + + Q + P PR R+NTLK+ V + V L K+ F ++ + L +
Sbjct: 26 ERALRIAQAMEKPLPRCFRINTLKISVQNLVKRLNKKGFQFRRVPWAREGFCLTREPFSI 85
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P + G +++Q +S AL PKPG V D +APG KT +LA LM+ KG I A
Sbjct: 86 TSTPEYLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMENKGVIYAF 145
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+++++R++ + + G N+ + H L +D E ILLD C+GSGT
Sbjct: 146 DVDEDRLKETRINLSRLGVLNVILFHSSSLYIDQLG---IEFDKILLDAPCTGSGTI--- 199
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENE 286
H P T D + Q K + AL PG +VYSTCS+ ENE
Sbjct: 200 --HKNPERKWNRTMDDIKF-----CQGLQMKLVEKALEVLKPG-GILVYSTCSLEPEENE 251
Query: 287 DVIKSVL 293
VI+ VL
Sbjct: 252 FVIQWVL 258
>gi|229174531|ref|ZP_04302063.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MM3]
gi|228609091|gb|EEK66381.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MM3]
Length = 402
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAV-LELGKQFVVQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L G+ ++ DL D + + G
Sbjct: 119 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAIELLAGEGIEAKRGDLSEDAIQIERG 175
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G +VLD+C+APG KT H+A +KG G++
Sbjct: 176 NVAHTDAF-KKGFLSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGQV 234
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 235 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 293
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L + + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 294 RRKPDIKLGKNKG-------DSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 344
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 345 EQVIKQFL 352
>gi|229061468|ref|ZP_04198813.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH603]
gi|229134673|ref|ZP_04263482.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-ST196]
gi|229168605|ref|ZP_04296328.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH621]
gi|228615011|gb|EEK72113.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH621]
gi|228648719|gb|EEL04745.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-ST196]
gi|228717891|gb|EEL69539.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH603]
Length = 415
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 132 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 188
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 189 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDTVLDSCAAPGGKTTHIAERLDGTGKV 247
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 248 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 306
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 307 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 357
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 358 EQVIKQFL 365
>gi|423612082|ref|ZP_17587943.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD107]
gi|401247089|gb|EJR53433.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD107]
Length = 444
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|163941603|ref|YP_001646487.1| sun protein [Bacillus weihenstephanensis KBAB4]
gi|423489041|ref|ZP_17465723.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BtB2-4]
gi|423494766|ref|ZP_17471410.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
CER057]
gi|423498442|ref|ZP_17475059.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
CER074]
gi|423592139|ref|ZP_17568170.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD048]
gi|423598824|ref|ZP_17574824.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD078]
gi|423661295|ref|ZP_17636464.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM022]
gi|423669439|ref|ZP_17644468.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM034]
gi|423674382|ref|ZP_17649321.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM062]
gi|163863800|gb|ABY44859.1| sun protein [Bacillus weihenstephanensis KBAB4]
gi|401150859|gb|EJQ58311.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
CER057]
gi|401160491|gb|EJQ67869.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
CER074]
gi|401232272|gb|EJR38774.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD048]
gi|401237094|gb|EJR43551.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD078]
gi|401298566|gb|EJS04166.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM034]
gi|401301336|gb|EJS06925.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM022]
gi|401309933|gb|EJS15266.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VDM062]
gi|402432289|gb|EJV64348.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BtB2-4]
Length = 444
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDTVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|418323824|ref|ZP_12935086.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
pettenkoferi VCU012]
gi|365229170|gb|EHM70333.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
pettenkoferi VCU012]
Length = 437
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 122/252 (48%), Gaps = 15/252 (5%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
VRVNT K+ AV L ++ ++D D+ + G + G + +Q K+S
Sbjct: 181 VRVNTAKISTSEAVQRLEEEGFTVEEDAELDVCLHVNGGVIANSDSFREGLISIQDKSSM 240
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
VA L P+ G +LDACSAPG K H+ L++G G++ A ++++ ++ +++ I G
Sbjct: 241 FVAHYLDPQIGDHILDACSAPGGKACHIGELLRGTGQVTATDIHQHKIALIQENIHKLGL 300
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
++++ + D P Y IL+D CSG G + + +T ++
Sbjct: 301 SHVKAMQHDATT--PYQEMYDR---ILVDAPCSGLGVLRHKPE-------IKYTQSWDDI 348
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ-LATP 306
+L L + ++H L G +VYSTC+I Q+ENE+VI + L F F+ + P
Sbjct: 349 HQLVDLQLEILENVKHQLKPGGT--LVYSTCTIEQLENENVIYTFLKQNSEFEFEPIEHP 406
Query: 307 FPNGTAEASQFL 318
+ + Q L
Sbjct: 407 ITHEQVKTLQIL 418
>gi|423452834|ref|ZP_17429687.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5X1-1]
gi|401139393|gb|EJQ46955.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5X1-1]
Length = 444
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L ++ + ++ +L D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLAEEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHVHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|402833087|ref|ZP_10881709.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
CM52]
gi|402281454|gb|EJU30089.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
CM52]
Length = 443
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 89/305 (29%), Positives = 143/305 (46%), Gaps = 26/305 (8%)
Query: 9 LHTNLRHP---LWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSI--EDLMALYQTPDVP 63
L T R P +P G A + L A+ L + LVR ++ E+ AL + +
Sbjct: 122 LRTAAREPEKATFPTGKAHEAENL---ALSLQHPEWLVRRWIRQFGYEEARALCEFDNAQ 178
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
+R NTLK+ D + L K+ V + P+ ++ L + G +Q
Sbjct: 179 ATLSLRTNTLKITRDKLLERLSKEGVEAEPSAWTPEGILCLRHGSLDALESLQQGLFQVQ 238
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
++S +VA LAP+PG VLD CSAPG KT H+AA M +G+IVA ++++ ++RR+ +
Sbjct: 239 DESSMLVAHILAPEPGEFVLDVCSAPGGKTTHIAASMGDRGRIVALDVHEHKMRRIAENC 298
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRA---ILLDPSCSGSGTAAERLDHLLPSHASG 239
+ G ++E L LD ++ R +L+D CSG G + D +
Sbjct: 299 ERLGIKSVEPLL-----LDAREAGRRFSRQADRVLVDAPCSGLGVLRRKPD-------AR 346
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
P ++ L +L + A+ GV +VYSTC+I + ENE V++ L F
Sbjct: 347 WRKRPDDLAALARLQREILSSAAEAVKSGGV--LVYSTCTIEREENEAVVEDFLARHEEF 404
Query: 300 GFQLA 304
+ A
Sbjct: 405 SLENA 409
>gi|423522305|ref|ZP_17498778.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA4-10]
gi|401174999|gb|EJQ82202.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA4-10]
Length = 444
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|260887300|ref|ZP_05898563.1| ribosomal RNA small subunit methyltransferase B [Selenomonas
sputigena ATCC 35185]
gi|330838946|ref|YP_004413526.1| sun protein [Selenomonas sputigena ATCC 35185]
gi|260862936|gb|EEX77436.1| ribosomal RNA small subunit methyltransferase B [Selenomonas
sputigena ATCC 35185]
gi|329746710|gb|AEC00067.1| sun protein [Selenomonas sputigena ATCC 35185]
Length = 443
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 142/302 (47%), Gaps = 20/302 (6%)
Query: 9 LHTNLRHP---LWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSI--EDLMALYQTPDVP 63
L T R P +P G A + L A+ L + LVR ++ E+ AL + +
Sbjct: 122 LRTAAREPEKAAFPTGKAHEAENL---ALSLQHPEWLVRRWIEQFGYEEARALCEFDNAQ 178
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
+R NTLK+ D + L K+ V + P+ ++ L + G +Q
Sbjct: 179 ATLSLRTNTLKITRDKLLERLSKEGVEAEPSAWTPEGILFLRHGSLDALESLQQGLFQVQ 238
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
++S +VA LAP+PG VLD CSAPG KT H+AA M G+IVA ++++ ++RR+ +
Sbjct: 239 DESSMLVAHVLAPEPGEFVLDVCSAPGGKTTHIAASMGDCGRIVALDVHEHKMRRIAENC 298
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+ G ++E L D + P ++ +L+D CSG G + D +
Sbjct: 299 ERLGIKSVEPLLLDAREAGRRFPRQAD--RVLVDAPCSGLGVLRRKPD-------ARWRK 349
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ 302
P ++ L +L + A+ GV +VYSTC+I + ENE V++ L F +
Sbjct: 350 RPDDLAALARLQREILSSAAEAVKSGGV--LVYSTCTIEREENEAVVEDFLARHEEFSLE 407
Query: 303 LA 304
A
Sbjct: 408 NA 409
>gi|366164626|ref|ZP_09464381.1| NOL1/NOP2/sun family RNA methylase [Acetivibrio cellulolyticus CD2]
Length = 457
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 118/245 (48%), Gaps = 20/245 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
ED + Y D+P+ +RVNTLK+ V+ L++ F ++ D G +
Sbjct: 21 EDFIKSY---DLPRFYGLRVNTLKISVEE-FLKI-SPFKLEPIPWTKDGFYYNEGENPGK 75
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
HP G ++Q ++ + A + KPG +LD C+APG KTV +AA MKGKG +VA ++
Sbjct: 76 HPYYYAGLYYIQEPSAMLPGAVIDAKPGENILDLCAAPGGKTVQIAAGMKGKGLLVANDI 135
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
N +RV+ L I+L G N V + NL K + + IL+D CSG G + D
Sbjct: 136 NSDRVKALVKNIELCGITNAVVTNDSPQNLSAKFNHFFD--KILIDAPCSGEGMFRKDED 193
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRH--ALSFPGVERVVYSTCSIHQVENEDV 288
A + + S Q+ L H + PG +VYSTC+ ENE +
Sbjct: 194 ----------AAKSWGKYKCDLCSGMQRDILGHVDGMLKPG-GYLVYSTCTFSPEENEQM 242
Query: 289 IKSVL 293
I + L
Sbjct: 243 IAAFL 247
>gi|423615874|ref|ZP_17591708.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD115]
gi|401260411|gb|EJR66584.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD115]
Length = 444
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 161 LETAEKMCKVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKSGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E+ D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVEIKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 387 EQVIDKFL 394
>gi|186684748|ref|YP_001867944.1| sun protein [Nostoc punctiforme PCC 73102]
gi|186467200|gb|ACC83001.1| sun protein [Nostoc punctiforme PCC 73102]
Length = 487
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 87/294 (29%), Positives = 136/294 (46%), Gaps = 28/294 (9%)
Query: 19 PVGDAEKFLMLHK---GAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM 75
P E+ +LH IQ+ L QL + + E + Q+P + +R+N L
Sbjct: 175 PENPVERLGILHSFPDWIIQVWLEQLGLTETEQLCE---WMNQSPTID----LRINPLCT 227
Query: 76 DVDS--AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL 133
++ A L+ V + DL L + + P G +Q ++ +V+ L
Sbjct: 228 SIEEVEAALQSVGLLVRRIPDLPQALRFMGNTGSIQKLPGFKEGWWTVQDASAQLVSHLL 287
Query: 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL 193
P+PG V+D C+APG KT H+A LM GKI AC+ R+R+L++ + +I++
Sbjct: 288 DPQPGEVVIDVCAAPGGKTTHIAELMADSGKIWACDRTASRLRKLQENSQRLNLQSIQIY 347
Query: 194 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKL 253
GD + + + +LLD CSG GT + HA E R +L
Sbjct: 348 TGDSRH---SNQFQNTADRVLLDAPCSGLGT--------MHRHADARWRQTPESVR--EL 394
Query: 254 SAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVIKSVLPIAMSFGFQLATP 306
S QK+ L H +F V VY+TC++H ENE+VI + L A S +Q+ P
Sbjct: 395 SVLQKELLTHTSTFVKAGGVLVYATCTLHPAENEEVISAFL--AESPHWQIEPP 446
>gi|423367909|ref|ZP_17345341.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD142]
gi|423470079|ref|ZP_17446823.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6O-2]
gi|401082770|gb|EJP91035.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD142]
gi|402437331|gb|EJV69355.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6O-2]
Length = 444
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDAVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|310642738|ref|YP_003947496.1| ribosomal RNA small subunit methyltransferase b [Paenibacillus
polymyxa SC2]
gi|386041819|ref|YP_005960773.1| sun protein [Paenibacillus polymyxa M1]
gi|309247688|gb|ADO57255.1| Ribosomal RNA small subunit methyltransferase B [Paenibacillus
polymyxa SC2]
gi|343097857|emb|CCC86066.1| sun protein [Paenibacillus polymyxa M1]
Length = 471
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 86/290 (29%), Positives = 138/290 (47%), Gaps = 25/290 (8%)
Query: 40 QLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP 97
Q LV+ +K ++ A+ + + P VRVNT D +L + V + D VP
Sbjct: 175 QWLVKRWIKQYGVDTAEAICKANNEPPAVSVRVNTTMTSRD----QLLDEMVAKGIDAVP 230
Query: 98 D-----LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKT 152
+++ G ++ + +G + +Q ++S +VA A+AP+PG VLD C+APG KT
Sbjct: 231 SPVSPYGIVVRSGGNMALTSWYTDGLLSVQDESSMLVAEAVAPEPGMTVLDCCAAPGGKT 290
Query: 153 VHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212
H+A LMK +G+IVA +L+ + + +++ G +E + GD L+L + S R
Sbjct: 291 AHMAELMKDRGRIVANDLHAHKHQLIREQASRLGLDAVETVTGDALDLKERYAPASFDR- 349
Query: 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM--ERLNKLSAFQKKALRHALSFPGV 270
ILLD CSG G + D L S + D T++ E L+ ++ K G+
Sbjct: 350 ILLDAPCSGFGVIRRKPD-LRWSKTAEDVRDITQLQHELLDSVAGLLKPG--------GI 400
Query: 271 ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKA 320
+VYSTC+I ENE + L + FP+ E K
Sbjct: 401 --LVYSTCTIEPDENEGQLARFLSEHPEYELAKDHSFPDVNHEMDGIQKG 448
>gi|350525803|ref|YP_002581368.2| tRNA/RNA cytosine-C5-methylase [Thermococcus sp. AM4]
gi|345650622|gb|EEB73106.2| tRNA/RNA cytosine-C5-methylase [Thermococcus sp. AM4]
Length = 337
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 81/248 (32%), Positives = 119/248 (47%), Gaps = 20/248 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E +A+ + + P PR RVNTL+++V L K+ F ++ + L +
Sbjct: 52 ERALAIAEAMEKPLPRCFRVNTLRIEVPKLTKLLNKKGFQFRRVPWAREGFCLTREPFSI 111
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P ++G +++Q +S AL PKPG V D SAPG KT +LA LM+ +G I A
Sbjct: 112 TSTPEYLSGLLYIQEASSMYPPVALEPKPGETVADMASAPGGKTSYLAQLMENEGIIYAF 171
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ ++R++ + + G N + H L +D E ILLD C+GSGT
Sbjct: 172 DVGEDRLKETRLNLSRLGVTNTVLFHRSSLYIDELG---VEFDKILLDAPCTGSGTI--- 225
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVEN 285
H P + T ME + Q K L ALS G+ +VYSTCS+ EN
Sbjct: 226 --HKNPERKANRT-----MEDVKFCQNLQMKMLEKALSVLRKGGI--LVYSTCSLEPEEN 276
Query: 286 EDVIKSVL 293
E VI+ VL
Sbjct: 277 EFVIQWVL 284
>gi|423401293|ref|ZP_17378466.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-2]
gi|423457952|ref|ZP_17434749.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5X2-1]
gi|423478003|ref|ZP_17454718.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6X1-1]
gi|401148336|gb|EJQ55829.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5X2-1]
gi|401654283|gb|EJS71826.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-2]
gi|402428165|gb|EJV60262.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6X1-1]
Length = 444
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 124/248 (50%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAV-LELGKQFVVQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L G+ ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAIELLAGEGIEAKRGDLSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G +VLD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L + + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGKNKG-------DSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|308069674|ref|YP_003871279.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
polymyxa E681]
gi|305858953|gb|ADM70741.1| Ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
polymyxa E681]
Length = 471
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 85/279 (30%), Positives = 134/279 (48%), Gaps = 25/279 (8%)
Query: 40 QLLVRNKVKSI--EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP 97
Q LV+ +K + A+ Q + P VRVNT D + E+ + + D VP
Sbjct: 175 QWLVKRWIKQYGADTAEAICQANNEPPAVSVRVNTTMTSRDQLLDEMNSKGL----DAVP 230
Query: 98 DL-----LILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKT 152
+++ G ++ + +G + +Q ++S +VA A+AP+PG VLD C+APG KT
Sbjct: 231 SAVSPYGIVVRSGGNMALTSWYTDGLLSVQDESSMLVAEAVAPEPGMLVLDCCAAPGGKT 290
Query: 153 VHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212
H+A LMK G+IVA +L+ + + +++ G +E + GD L L + S R
Sbjct: 291 AHMAELMKDHGRIVANDLHAHKHQLIREQANRLGLDAVETVTGDALELKERYAPASFDR- 349
Query: 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM--ERLNKLSAFQKKALRHALSFPGV 270
ILLD CSG G + D L S + D T++ E L+ ++ K PG
Sbjct: 350 ILLDAPCSGFGVIRRKPD-LRWSKTAQDVRDITQLQHELLDSVAGLLK---------PG- 398
Query: 271 ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
+VYSTC+I ENE + L + + FP+
Sbjct: 399 GILVYSTCTIEPDENEGQLTQFLSEHPEYEWAEGHSFPD 437
>gi|423395834|ref|ZP_17373035.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-1]
gi|401653576|gb|EJS71120.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-1]
Length = 444
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLANEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQADRLGLENVETKALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 387 EQVIKQFL 394
>gi|345004833|ref|YP_004807686.1| RNA methylase [halophilic archaeon DL31]
gi|344320459|gb|AEN05313.1| RNA methylase, NOL1/NOP2/sun family [halophilic archaeon DL31]
Length = 318
Score = 99.8 bits (247), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 84/251 (33%), Positives = 121/251 (48%), Gaps = 21/251 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDL 108
++D A + + P P VRVN++K D + L ++ V + D LL LP G
Sbjct: 11 VDDYEAFREACNRPLPSVVRVNSIKADPERVRTALDEEGVTYEPVDWHDRLLKLPEGS-P 69
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
+ V+G + Q + S++ A AL P PG +VLD+C+APG+KT HLA LM G +V
Sbjct: 70 GTNWAYVHGWLHGQEEVSALPALALDPDPGDRVLDSCAAPGSKTCHLADLMDDTGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGD--FLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
+ N R+ L+ + G +N+ V + D LD D E ++ D CS GT
Sbjct: 130 DNNLGRISALRHNAERLGVSNLVVTNRDARTFALDGVD----EFDGVVADVPCSCEGTCR 185
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVE 284
+ D L + M + L QK LR A L+ PG E VVYSTC+ E
Sbjct: 186 KNPDAL----------ETWTMNHVEGLVGVQKGILRRAIQLTRPGGE-VVYSTCTFAPEE 234
Query: 285 NEDVIKSVLPI 295
NE V+ L +
Sbjct: 235 NERVVDHALEV 245
>gi|16078637|ref|NP_389456.1| RNA-binding Sun protein [Bacillus subtilis subsp. subtilis str.
168]
gi|221309449|ref|ZP_03591296.1| hypothetical protein Bsubs1_08691 [Bacillus subtilis subsp.
subtilis str. 168]
gi|221313774|ref|ZP_03595579.1| hypothetical protein BsubsN3_08627 [Bacillus subtilis subsp.
subtilis str. NCIB 3610]
gi|221318698|ref|ZP_03599992.1| hypothetical protein BsubsJ_08561 [Bacillus subtilis subsp.
subtilis str. JH642]
gi|221322969|ref|ZP_03604263.1| hypothetical protein BsubsS_08667 [Bacillus subtilis subsp.
subtilis str. SMY]
gi|402775819|ref|YP_006629763.1| RNA-binding Sun protein [Bacillus subtilis QB928]
gi|418033279|ref|ZP_12671756.1| hypothetical protein BSSC8_27000 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|452914583|ref|ZP_21963210.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
MB73/2]
gi|3915867|sp|P94464.2|RSMB_BACSU RecName: Full=Ribosomal RNA small subunit methyltransferase B;
AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase
RsmB
gi|2337803|emb|CAA74264.1| putative Fmu protein [Bacillus subtilis subsp. subtilis str. 168]
gi|2633946|emb|CAB13447.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
subsp. subtilis str. 168]
gi|351469427|gb|EHA29603.1| hypothetical protein BSSC8_27000 [Bacillus subtilis subsp. subtilis
str. SC-8]
gi|402481001|gb|AFQ57510.1| RNA-binding Sun protein [Bacillus subtilis QB928]
gi|407958981|dbj|BAM52221.1| RNA-binding Sun protein [Synechocystis sp. PCC 6803]
gi|407964558|dbj|BAM57797.1| RNA-binding Sun protein [Bacillus subtilis BEST7003]
gi|452117003|gb|EME07398.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
MB73/2]
Length = 447
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+K DL D + L G H NG V
Sbjct: 176 IPPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGTIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PK VLDAC+APG K+ H+A LMK KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY--SEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++H + ++ + + IL+D CSG G + D
Sbjct: 295 AADRLG---LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPD-------M 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + EN++VI + +
Sbjct: 345 KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENDEVIHAFI 397
>gi|228960081|ref|ZP_04121745.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar pakistani str. T13001]
gi|229047552|ref|ZP_04193142.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH676]
gi|229146436|ref|ZP_04274807.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-ST24]
gi|229152064|ref|ZP_04280259.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
m1550]
gi|229192034|ref|ZP_04319004.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
ATCC 10876]
gi|228591585|gb|EEK49434.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
ATCC 10876]
gi|228631413|gb|EEK88047.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
m1550]
gi|228637069|gb|EEK93528.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-ST24]
gi|228723799|gb|EEL75154.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH676]
gi|228799597|gb|EEM46550.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar pakistani str. T13001]
Length = 429
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 372 EQVIEKFL 379
>gi|193215241|ref|YP_001996440.1| Fmu (Sun) domain-containing protein [Chloroherpeton thalassium ATCC
35110]
gi|193088718|gb|ACF13993.1| Fmu (Sun) domain protein [Chloroherpeton thalassium ATCC 35110]
Length = 448
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 120/243 (49%), Gaps = 12/243 (4%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVH 111
L +Y++ + P P +R N+LK+ ++ +L K+ + L D LI +
Sbjct: 159 LQLIYESLNKPAPLALRANSLKISREALQKKLEKESIPTFLGKLSADALICKGRRRIIQS 218
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
+G +Q + S +++ L PKP VLDAC+ G KT+HLAALMK KG I A ++N
Sbjct: 219 QCYQDGLCEIQDEGSQLISRLLDPKPKDTVLDACAGGGGKTLHLAALMKNKGAIFAYDVN 278
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
+R ++ IK SG NI +L K+ + ++ +L+D C+GSGT D
Sbjct: 279 PKRFGNIRQRIKRSGQQNIRLLDSPEKLAQFKNDWHEKIDCLLIDAPCTGSGTVRRNPD- 337
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRH-ALSFPGVERVVYSTCSIHQVENEDVIK 290
E L +++A Q + L ++ +++Y+TCS+ + ENE I+
Sbjct: 338 ---------LKKRLTKEALQRITAQQAEILEEFSVLLKPNGKMLYATCSLFRDENEGQIE 388
Query: 291 SVL 293
S L
Sbjct: 389 SFL 391
>gi|206971310|ref|ZP_03232261.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1134]
gi|218233863|ref|YP_002368666.1| sun protein [Bacillus cereus B4264]
gi|296504360|ref|YP_003666060.1| sun protein [Bacillus thuringiensis BMB171]
gi|423412330|ref|ZP_17389450.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3O-2]
gi|423431885|ref|ZP_17408889.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4O-1]
gi|423585726|ref|ZP_17561813.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD045]
gi|423628958|ref|ZP_17604707.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD154]
gi|423641054|ref|ZP_17616672.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD166]
gi|423649728|ref|ZP_17625298.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD169]
gi|423656724|ref|ZP_17632023.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD200]
gi|206734082|gb|EDZ51253.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1134]
gi|218161820|gb|ACK61812.1| sun protein [Bacillus cereus B4264]
gi|296325412|gb|ADH08340.1| sun protein [Bacillus thuringiensis BMB171]
gi|401104398|gb|EJQ12375.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3O-2]
gi|401116641|gb|EJQ24479.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4O-1]
gi|401233072|gb|EJR39568.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD045]
gi|401268503|gb|EJR74551.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD154]
gi|401280115|gb|EJR86037.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD166]
gi|401283008|gb|EJR88905.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD169]
gi|401290465|gb|EJR96159.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD200]
Length = 444
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIEKFL 394
>gi|430759003|ref|YP_007209724.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. subtilis str. BSP1]
gi|430023523|gb|AGA24129.1| Ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. subtilis str. BSP1]
Length = 447
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+K DL D + L G H NG V
Sbjct: 176 IPPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGTIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PK VLDAC+APG K+ H+A LMK KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY--SEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++H + ++ + + IL+D CSG G + D
Sbjct: 295 AADRLG---LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPD-------M 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + EN++VI + +
Sbjct: 345 KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENDEVIHAFI 397
>gi|448656985|ref|ZP_21682524.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula californiae ATCC
33799]
gi|445763027|gb|EMA14231.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula californiae ATCC
33799]
Length = 303
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 114/250 (45%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
I+D A + P P +RVNT+K V+ L + D L +LP PG
Sbjct: 11 IDDFEAFIDACERPLPSAIRVNTIKATVERVRTALADADIAYDPVDWHDGLFVLPEDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ +G + Q + S + A L P+PG +V DAC+APG+KT LAALM+ G++
Sbjct: 71 ANWP----YFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTTQLAALMEDTGEV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA + V H D N K L+D CS GT
Sbjct: 127 VATDNNLGRISALRTNTERLGATTVAVTHEDGRNHSLKPFGGEGYDRALVDVPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
+ D L + + + +S QK L+ A+ PG VVYSTC+
Sbjct: 187 RKNPDTL----------EDWSLSHVEGISGVQKGILKRAVEVTEPG-GTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE V+ VL
Sbjct: 236 ENEAVLDYVL 245
>gi|407706324|ref|YP_006829909.1| transition state regulatory protein AbrB [Bacillus thuringiensis
MC28]
gi|407384009|gb|AFU14510.1| sun protein [Bacillus thuringiensis MC28]
Length = 444
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKSGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G NIE D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENIETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 387 EQVIDKFL 394
>gi|301321426|gb|ADK70069.1| ribosomal RNA small subunit methyltransferase B [Mycoplasma
mycoides subsp. mycoides SC str. Gladysdale]
Length = 423
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 34/273 (12%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ 87
+LH + +L L +L++ K I + + + +PK Y+R+NTLK+ D +
Sbjct: 141 ILHSFSYELYL--MLIKQYDKDIVNQIVV-NNHQIPKL-YIRLNTLKITSDQLFNKYKDI 196
Query: 88 FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSA 147
++++K + V D LI + L NG + +Q KAS +V+ L P KVLD CSA
Sbjct: 197 YLLKKTN-VNDCLIANKT--IINSNLYKNGFITIQDKASILVSQILNPSLNTKVLDMCSA 253
Query: 148 PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 207
PG K HL+ ++K G I+ E+N+ +++ +K+ I NI + + D + K+
Sbjct: 254 PGGKLTHLSMILKNTGNIIGNEINESKIKLIKENINRLNCLNISLTNMDARKIKQKE--- 310
Query: 208 SEVRAILLDPSCSGSGTAAE------RLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
E +LLD CSG G R D + ++N + Q++ L
Sbjct: 311 -EFDYVLLDAPCSGFGVFKRKPEIKLRFDQV----------------QVNSIINLQEELL 353
Query: 262 RHA-LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
A + +VYSTC+I+Q EN++ I L
Sbjct: 354 ESAYYNLKNNGEMVYSTCTINQDENQNQITKFL 386
>gi|228922619|ref|ZP_04085919.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
gi|228837048|gb|EEM82389.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar huazhongensis BGSC 4BD1]
Length = 368
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 85 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 141
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 142 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 200
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 201 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 259
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 260 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 310
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 311 EQVIEKFL 318
>gi|164687800|ref|ZP_02211828.1| hypothetical protein CLOBAR_01444 [Clostridium bartlettii DSM
16795]
gi|164603075|gb|EDQ96540.1| ribosomal RNA small subunit methyltransferase B [Clostridium
bartlettii DSM 16795]
Length = 441
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/278 (28%), Positives = 138/278 (49%), Gaps = 25/278 (8%)
Query: 33 AIQLALAQLLVRNKVKSI-----EDLM-ALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK 86
A + + + +VRN + + EDL+ A + P + Y+RVNTLK D + L +
Sbjct: 143 ATKYSYNKWIVRNWISNFGREFTEDLLEANTERPSI----YLRVNTLKTTRDELIKLLEE 198
Query: 87 QFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDAC 145
Q V +K + + + + ++ + L G +Q +S +V L P+ KVLD C
Sbjct: 199 QEVNCEKVPFMDEAIKVNNLKNIENNELYKKGLFTVQDISSMLVGKILNPQKDTKVLDVC 258
Query: 146 SAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205
SAPG KT H+A LM+ G++++ ++ + +++ +++++ G N++V D LNLD
Sbjct: 259 SAPGGKTTHIATLMENSGQVISRDIFEHKIKLIQNSVNRLGLKNVDVQLFDALNLDK--D 316
Query: 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 265
+ + ++L D CSG G + P E E + L QK+ L++A
Sbjct: 317 SIDKFDSVLADVPCSGLGIIKRK-----PE------IKYKEKEEIKDLPKLQKQILQNAA 365
Query: 266 SFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ 302
+ V ++YSTC+I EN +V++S L F +
Sbjct: 366 KYVKVGGTLIYSTCTIQDDENIEVVESFLQSNKRFKLE 403
>gi|449094266|ref|YP_007426757.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
XF-1]
gi|449028181|gb|AGE63420.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
XF-1]
Length = 447
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+K DL D + L G H NG V
Sbjct: 176 IPPKQTLRVNQMKADRAELLDQMAAEGIEVEKGDLAEDAVKLLKGTIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PK VLDAC+APG K+ H+A LMK KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKSDETVLDACAAPGGKSAHIAELMKNKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY--SEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++H + ++ + + IL+D CSG G + D
Sbjct: 295 AADRLG---LTIIHAETMDARKAGETFENEQFDRILVDAPCSGFGVIRRKPD-------M 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + EN++VI + +
Sbjct: 345 KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENDEVIHAFI 397
>gi|42560767|ref|NP_975218.1| Sun family protein [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|42492263|emb|CAE76860.1| Sun family protein [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
Length = 432
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 131/273 (47%), Gaps = 34/273 (12%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ 87
+LH + +L L +L++ K I + + + +PK Y+R+NTLK+ D +
Sbjct: 150 ILHSFSYELYL--MLIKQYDKDIVNQIVV-NNHQIPKL-YIRLNTLKITSDQLFNKYKDI 205
Query: 88 FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSA 147
++++K + V D LI + L NG + +Q KAS +V+ L P KVLD CSA
Sbjct: 206 YLLKKTN-VNDCLIANKT--IINSNLYKNGFITIQDKASILVSQILNPSLNTKVLDMCSA 262
Query: 148 PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 207
PG K HL+ ++K G I+ E+N+ +++ +K+ I NI + + D + K+
Sbjct: 263 PGGKLTHLSMILKNTGNIIGNEINESKIKLIKENINRLNCLNISLTNMDARKIKQKE--- 319
Query: 208 SEVRAILLDPSCSGSGTAAE------RLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
E +LLD CSG G R D + ++N + Q++ L
Sbjct: 320 -EFDYVLLDAPCSGFGVFKRKPEIKLRFDQV----------------QVNSIINLQEELL 362
Query: 262 RHA-LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
A + +VYSTC+I+Q EN++ I L
Sbjct: 363 ESAYYNLKNNGEMVYSTCTINQDENQNQITKFL 395
>gi|355708094|gb|AES03161.1| NOL1/NOP2/Sun domain family, member 5 [Mustela putorius furo]
Length = 260
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 67/163 (41%), Positives = 87/163 (53%), Gaps = 21/163 (12%)
Query: 26 FLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAVLE 83
L H+ ++ LA+L V+ +V EDL+ + P PR+VRVNTLK + AV
Sbjct: 94 LLERHQARLKAELARLKVQRRVSRNEDLLQVGSRPGTASQVPRFVRVNTLKTSPEDAVDY 153
Query: 84 LGKQ-FVVQ-KDDLVPDL-----------------LILPPGCDLHVHPLIVNGCVFLQGK 124
+Q F Q + + DL L+ P DLH HPL G + LQ K
Sbjct: 154 FKRQGFSYQGRASSLEDLRALKGKCFLLDPLLPELLVFPAQTDLHDHPLYRAGHLILQDK 213
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
AS + A LAP PG VLDAC+APGNKT HLAAL++ +GKI A
Sbjct: 214 ASCLPAMLLAPPPGSHVLDACAAPGNKTSHLAALLRNQGKIFA 256
>gi|229180141|ref|ZP_04307485.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
172560W]
gi|228603350|gb|EEK60827.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
172560W]
Length = 429
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTAHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 372 EQVIEKFL 379
>gi|229086418|ref|ZP_04218594.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-44]
gi|228696934|gb|EEL49743.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-44]
Length = 431
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/228 (34%), Positives = 118/228 (51%), Gaps = 16/228 (7%)
Query: 69 RVNTLKMDVDSAVLELGKQFVVQK-DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
RVN K V+ A+ L + + K DL D + + G H G + +Q ++S
Sbjct: 167 RVNVDKATVEEAISLLENEGIQAKYGDLSEDAIQIEKGNVAHTEAF-QKGFLSIQDESSM 225
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+VA ALAP G KVLD+C+APG KT H+A +KG G++++ +L+ +VR ++ K G
Sbjct: 226 LVARALAPAEGDKVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHPHKVRLIQQQAKRLGL 285
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+E D ++ + A IL+D CSG G + D L + +
Sbjct: 286 ENVETKALDARKVE-EHFANESFDKILVDAPCSGFGVIRRKPDIKLGK-------EKGDS 337
Query: 248 ERLN--KLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL+ +LS +K A L G R+VYSTC+I ++ENE VI+ L
Sbjct: 338 ERLSTIQLSILEKVA--PLLKTGG--RLVYSTCTIEKIENEQVIEQFL 381
>gi|423635364|ref|ZP_17611017.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD156]
gi|401278115|gb|EJR84051.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD156]
Length = 444
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIEKFL 394
>gi|384265156|ref|YP_005420863.1| sun protein [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387898153|ref|YP_006328449.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
amyloliquefaciens Y2]
gi|380498509|emb|CCG49547.1| sun protein [Bacillus amyloliquefaciens subsp. plantarum YAU
B9601-Y2]
gi|387172263|gb|AFJ61724.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
amyloliquefaciens Y2]
Length = 447
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D ++ + E+ + DL PD + L G + NG V
Sbjct: 176 IPPKQTLRVNHIKSDRETVLNEMENAGLEAEAGDLSPDAIKLLKGSIANT-AFFQNGRVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LM+ +G + + +L++ +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
+ G + ++ ++ A+ R IL+D CSG G + D
Sbjct: 295 GAERLG---LTIIDAQTMDARKAGEAFGAERFDRILVDAPCSGFGVIRRKPDM------- 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + R LS Q LR P V++ +VYSTC++ + ENE+V+ + +
Sbjct: 345 KYTKTPEDSRR---LSEIQLGILREIA--PLVKKGGTLVYSTCTMDRTENEEVMHAFI 397
>gi|423448370|ref|ZP_17425249.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5O-1]
gi|401128964|gb|EJQ36647.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG5O-1]
Length = 444
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKSGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALDPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G NIE D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENIETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 387 EQVINKFL 394
>gi|346310751|ref|ZP_08852764.1| hypothetical protein HMPREF9452_00633 [Collinsella tanakaei YIT
12063]
gi|345897244|gb|EGX67171.1| hypothetical protein HMPREF9452_00633 [Collinsella tanakaei YIT
12063]
Length = 314
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 79/244 (32%), Positives = 117/244 (47%), Gaps = 37/244 (15%)
Query: 64 KPRYVRVNTLKM---DVDSAVLELG---KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNG 117
+P +R NTLK DV +A+ E G + KD V D P D+ + G
Sbjct: 37 RPTTLRANTLKASADDVAAALDEAGIPYEHVPWYKDAFVVDA---PSERDVWGMGIYRKG 93
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
++LQ +S + ALAP+ G +LD C+APG KT +AAL G I ACELN R +
Sbjct: 94 GIYLQSLSSMLPPLALAPREGADILDMCAAPGGKTSQIAALTHGAAHICACELNVPRAEK 153
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
L+ + G N++++ D LD + +LLD C+G+GT
Sbjct: 154 LQYNMDKQGVTNLQIMRVDARKLD----EFFSFDQVLLDAPCTGTGTV------------ 197
Query: 238 SGHTADPTEMER-----LNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVI 289
DP +R L+K++ Q+ L L+ ++R ++YSTCSI ENE ++
Sbjct: 198 --RAGDPKAEKRITQQLLSKVTRSQRALLDRGLTV--LKRGGTLIYSTCSILPEENELML 253
Query: 290 KSVL 293
SVL
Sbjct: 254 ASVL 257
>gi|452855521|ref|YP_007497204.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452079781|emb|CCP21538.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 446
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 121/235 (51%), Gaps = 16/235 (6%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D D+ + E+ + DL PD + L G + NG V
Sbjct: 175 IPPKQTLRVNHIKSDRDTVLNEMENAGLEAEAGDLSPDAIKLLKGSIANT-AFFQNGRVS 233
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LM+ +G + + +L++ +V+ +K+
Sbjct: 234 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVKLIKE 293
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
+ G + ++ ++ A+ R +L+D CSG G + D
Sbjct: 294 GAERLG---LTIIDAQTMDARKAGEAFGAERFDRVLVDAPCSGFGVIRRKPDM------- 343
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ + + + G +VYSTC++ + ENE+V+ + +
Sbjct: 344 KYTKTPEDSRRLAEIQLGILREIAPLVKKGGT--LVYSTCTMDRTENEEVMHAFI 396
>gi|375362218|ref|YP_005130257.1| sun protein [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|421731756|ref|ZP_16170879.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451347055|ref|YP_007445686.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens IT-45]
gi|371568212|emb|CCF05062.1| sun protein [Bacillus amyloliquefaciens subsp. plantarum CAU B946]
gi|407073969|gb|EKE46959.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449850813|gb|AGF27805.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens IT-45]
Length = 447
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D ++ + E+ + DL PD + L G + NG V
Sbjct: 176 IPPKQTLRVNHIKSDRETVLNEMENAGLEAEAGDLSPDAIKLLKGSIANT-AFFQNGRVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LM+ +G + + +L++ +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
+ G + ++ ++ A+ R IL+D CSG G + D
Sbjct: 295 GAERLG---LTIIDAQTMDARKAGEAFGAERFDRILVDAPCSGFGVIRRKPDM------- 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + R LS Q LR P V++ +VYSTC++ + ENE+V+ + +
Sbjct: 345 KYTKTPEDSRR---LSEIQLGILREIA--PLVKKGGTLVYSTCTMDRTENEEVMHAFI 397
>gi|300711849|ref|YP_003737663.1| tRNA and rRNA cytosine-C5-methylase [Halalkalicoccus jeotgali B3]
gi|448295539|ref|ZP_21485603.1| tRNA and rRNA cytosine-C5-methylase [Halalkalicoccus jeotgali B3]
gi|299125532|gb|ADJ15871.1| tRNA and rRNA cytosine-C5-methylase [Halalkalicoccus jeotgali B3]
gi|445583638|gb|ELY37967.1| tRNA and rRNA cytosine-C5-methylase [Halalkalicoccus jeotgali B3]
Length = 302
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 116/262 (44%), Gaps = 17/262 (6%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDL 108
++D A + P VRVNT+K V+ L + V +D D P +L L
Sbjct: 11 VDDFEAFLAACERSLPSVVRVNTIKAGVERTKRALEAEDVGYRDRDWNPTVLELDTNKPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
+ P +G + Q + SS+ A L+P PG +VLDAC+APG KT +AALM G +VA
Sbjct: 71 NTWPYF-HGWIHGQEEVSSLPATVLSPDPGERVLDACAAPGGKTAQIAALMDDTGLVVAN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+ N R+ L+ + G N+ V D N K +L+D CS G +R
Sbjct: 130 DNNLGRLSALRFNAERLGLTNVAVTRQDARNFSLKPVGLDAFDRVLVDAPCSCEGIIRKR 189
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP---GVERVVYSTCSIHQVEN 285
D T D + + +S QK L+ A+ GV VVYSTC+ EN
Sbjct: 190 PD----------TLDEWSLSHVEGVSGVQKGILKRAIQATREGGV--VVYSTCTFAPEEN 237
Query: 286 EDVIKSVLPIAMSFGFQLATPF 307
E V+ L + TP
Sbjct: 238 EAVLDHALEEEDCRVVEFETPL 259
>gi|428204437|ref|YP_007083026.1| ribosomal RNA small subunit methyltransferase RsmB [Pleurocapsa sp.
PCC 7327]
gi|427981869|gb|AFY79469.1| ribosomal RNA small subunit methyltransferase RsmB [Pleurocapsa sp.
PCC 7327]
Length = 446
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 82/266 (30%), Positives = 125/266 (46%), Gaps = 33/266 (12%)
Query: 34 IQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRY-VRVNTLKMDVDSAVLELGKQ-FVVQ 91
IQL LAQ V E L + P P +RVN LK +D L V
Sbjct: 157 IQLWLAQF----GVAETEKLCEWFNRP----PEIDLRVNILKTTIDEVATALADAGITVS 208
Query: 92 KDDLVPDLLILPPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGN 150
+ +P L L G + P G +Q ++ +VA L P+PG V+DAC+APG
Sbjct: 209 RVPYLPQALRLIGGARSIQQLPGFQEGWWTVQDSSAQLVAHLLDPQPGEVVIDACAAPGG 268
Query: 151 KTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 210
KT H+A LM +G I AC+ + R+R+L++ I+ +I++ GD +S+
Sbjct: 269 KTTHIAELMGDRGTIWACDRVESRLRKLQENIQRLQLQSIQICTGDSRQ-------FSQF 321
Query: 211 RA----ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
R +LLD CSG GT H P T E++ +LS Q++ L +
Sbjct: 322 RQRGDRVLLDAPCSGLGTL-----HRRPDIRWRQTP-----EKIAQLSRLQEELLTQTAT 371
Query: 267 F-PGVERVVYSTCSIHQVENEDVIKS 291
+ +VY TC+++ +ENE V+++
Sbjct: 372 WVKSGGTLVYVTCTLNSLENETVVRA 397
>gi|317967915|ref|ZP_07969305.1| sun protein [Synechococcus sp. CB0205]
Length = 441
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 66/188 (35%), Positives = 98/188 (52%), Gaps = 10/188 (5%)
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
DL P G +Q +++ +A L PKPG +VLDAC+APG K+ HLA LM +G+++
Sbjct: 229 DLRHLPGYDEGHWCVQDRSAQTIAPLLDPKPGERVLDACAAPGGKSTHLAELMGDQGQVL 288
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA-YSEVRAILLDPSCSGSGTA 225
A + + R+RR+ G IE HGD + L + P + A+L+D CSG GT
Sbjct: 289 ALDRGEARLRRVARNSDRLGLGCIETRHGDAVELVSEAPELLGQFDALLIDAPCSGLGTL 348
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
A D + DP +E L L + L L G R+VY+TC++H EN
Sbjct: 349 ARHAD-------ARWRIDPAAIEGLVTLQRQLLEGLLPLLKPAG--RLVYATCTVHPEEN 399
Query: 286 EDVIKSVL 293
D++++ L
Sbjct: 400 GDLLEAFL 407
>gi|423582075|ref|ZP_17558186.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD014]
gi|401212954|gb|EJR19695.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD014]
Length = 444
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIEKFL 394
>gi|383320013|ref|YP_005380854.1| ribosomal RNA methyltransferase NOP2 [Methanocella conradii HZ254]
gi|379321383|gb|AFD00336.1| ribosomal RNA methyltransferase NOP2 [Methanocella conradii HZ254]
Length = 320
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/300 (27%), Positives = 143/300 (47%), Gaps = 28/300 (9%)
Query: 33 AIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQK 92
A + + +V + + DL + + P Y+RVNTL+++ ++ + L + +
Sbjct: 18 ARKYGYPEYMVARFARFVPDLERFLASMEEPPRTYIRVNTLRINPNALIKRLSDKGFTLR 77
Query: 93 DDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNK 151
+ VPD L + + ++G ++Q K+S + ALAP+PG V+D ++PG K
Sbjct: 78 ETDVPDCLEVTGEPYSIGASAEFLSGYFYVQDKSSMVPPLALAPQPGDVVIDMAASPGGK 137
Query: 152 TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 211
T HLA +M +G ++A E+++ R+ L+ + G N + H +D +D A E++
Sbjct: 138 TTHLAQMMGNRGLLIAIEVDESRLAGLRSNLGRCGIMNTVLFH-----MDARDVARLEIK 192
Query: 212 A--ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR--HALSF 267
A ILLD C+G G A+ S T+ +E + S Q++ + HA
Sbjct: 193 ADKILLDAPCTGEGVIAK--------DRSRKTS--RGIEDIKYCSGLQEELIDAAHACLK 242
Query: 268 PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYFEP 327
PG +VYSTCS ENE + + +G ++ P P G + F + FEP
Sbjct: 243 PG-GILVYSTCSFAPEENECNVDYAI---KKYGMKV-EPIPYGEPGLTSF---GGLAFEP 294
>gi|337750137|ref|YP_004644299.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
mucilaginosus KNP414]
gi|336301326|gb|AEI44429.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
mucilaginosus KNP414]
Length = 485
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 40 QLLVRNKVKSIEDLMA--LYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLV 96
+ LVR + + A L + + P +R NT K+ ++ V L G+ + L
Sbjct: 188 EWLVRRWIAQFGEAAAERLCEANNEPPRVSLRANTRKLSREALVERLRGEGLEAEPSPLA 247
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
P +I+ G ++ + G +Q ++S +VA + P+PG +VLD C+APG KT HLA
Sbjct: 248 PAGVIVRGGGNMALTQDYAEGLYSIQDESSMLVAEWVDPQPGERVLDCCAAPGGKTTHLA 307
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
M+G+G+IVAC++++ + +++ G +I L D L P+ A ILLD
Sbjct: 308 EKMQGRGEIVACDVHEHKHGLIREQADRLGHESITTLTADARRL-PEHYAPESFDRILLD 366
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR--HALSFPGVERVV 274
CSG G + D TE E L + + Q++ L H L PG +V
Sbjct: 367 APCSGLGVIRRKPDMKWTK---------TEAE-LGDICSIQQELLEAVHGLLKPG-GVLV 415
Query: 275 YSTCSIHQVENEDVIKSVL 293
YSTC++ EN + +++ L
Sbjct: 416 YSTCTVEPAENGEAVRAFL 434
>gi|423378296|ref|ZP_17355580.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1O-2]
gi|423441404|ref|ZP_17418310.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4X2-1]
gi|423464478|ref|ZP_17441246.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6O-1]
gi|423533820|ref|ZP_17510238.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB2-9]
gi|423540911|ref|ZP_17517302.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB4-10]
gi|423547149|ref|ZP_17523507.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB5-5]
gi|423623059|ref|ZP_17598837.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD148]
gi|401172099|gb|EJQ79320.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB4-10]
gi|401178870|gb|EJQ86043.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB5-5]
gi|401259832|gb|EJR66006.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD148]
gi|401636562|gb|EJS54316.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1O-2]
gi|402418065|gb|EJV50365.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4X2-1]
gi|402420745|gb|EJV53016.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG6O-1]
gi|402464039|gb|EJV95739.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB2-9]
Length = 444
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKSGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALDPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G NIE D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENIETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 387 EQVIDKFL 394
>gi|448688658|ref|ZP_21694395.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula japonica DSM 6131]
gi|445778528|gb|EMA29470.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula japonica DSM 6131]
Length = 303
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 113/250 (45%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
I+D A + P P VRVNT+K V+ L + + D L +LP PG
Sbjct: 11 IDDFEAFIDACERPLPSAVRVNTIKATVERVRTALAEADIAHDPVDWHDGLFVLPEDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ G + Q + S + A L P+PG +V DAC+APG+KT LAALM G++
Sbjct: 71 ANWP----YFQGWIHGQEEVSVIPAEVLDPQPGERVWDACAAPGSKTTQLAALMDDTGEL 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA + V H D N K L+D CS GT
Sbjct: 127 VATDNNLGRISALRTNTERLGATTVAVTHEDGRNHSLKPFGGEGYDRALVDVPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
+ D L + + + +S QK L+ A+ PG VVYSTC+
Sbjct: 187 RKNPDTL----------EDWTLSHVEGISGVQKGILKRAVEVTEPG-GTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE V+ VL
Sbjct: 236 ENEAVLDYVL 245
>gi|229098334|ref|ZP_04229281.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-29]
gi|229117351|ref|ZP_04246729.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock1-3]
gi|228666251|gb|EEL21715.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock1-3]
gi|228685232|gb|EEL39163.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-29]
Length = 354
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 71 LETAEKMCEVNMLPPVP---TARVNVDKVTVEEAIELLASEGIEAKSGDLSDDAIQIERG 127
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 128 NVAHTEAF-KKGFLSIQDESSMLVARALDPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 186
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G NIE D + + A IL+D CSG G
Sbjct: 187 MSLDLHAHKVRLIKQQAERLGLENIETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 245
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 246 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 296
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 297 EQVIDKFL 304
>gi|344211568|ref|YP_004795888.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula hispanica ATCC
33960]
gi|343782923|gb|AEM56900.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula hispanica ATCC
33960]
Length = 303
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 115/250 (46%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
I+D A + P P VRVNT+K V+ L + + D L +LP PG
Sbjct: 11 IDDFEAFIDACERPLPSAVRVNTIKASVERVRTALADADIAYEPVDWHDGLFVLPEDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ +G + Q + S + A L P+PG +V DAC+APG+KT LAAL++ G++
Sbjct: 71 ANWP----YFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTTQLAALIEDTGEV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA + V H D N K L+D CS GT
Sbjct: 127 VATDNNLGRISALRTNTERLGATTVAVTHEDGRNHSLKPFGGEGYDRALVDVPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
+ D L + + + +S QK L+ A+ PG VVYSTC+
Sbjct: 187 RKNPDTL----------EDWTLSHVEGISGVQKGILKRAVEVTEPG-GTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE V+ VL
Sbjct: 236 ENEAVLDYVL 245
>gi|297544782|ref|YP_003677084.1| sun protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
gi|296842557|gb|ADH61073.1| sun protein [Thermoanaerobacter mathranii subsp. mathranii str. A3]
Length = 444
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 131/277 (47%), Gaps = 23/277 (8%)
Query: 22 DAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDV-DSA 80
D K+LM+ + +LL + E L+ + PK Y RVNTLK+D+ D
Sbjct: 136 DLRKYLMVTYSYPDWIVERLLNNYDEEKAEALLK--SLNEKPKICY-RVNTLKIDIEDLK 192
Query: 81 VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWK 140
L + + V +K + + L + + H L G +++Q +AS +V+ L P G
Sbjct: 193 KLLVSRGIVYKKGYYLEEALYIDIK-NPESHQLYKEGLIYIQDEASMLVSKILNPNEGET 251
Query: 141 VLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI--EVLHGDFL 198
VLD C+APG KT H+A LMK G +VA +L+ R+ +K+ K G N+ E F+
Sbjct: 252 VLDVCAAPGGKTTHIAQLMKNTGNVVAFDLHPHRLELIKENCKRLGITNVKAEAFDSTFV 311
Query: 199 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD--PTEMERLNKLSAF 256
N D + +L D C+G G ++ D L ++ + T+ + L+ S +
Sbjct: 312 N----DKYLEKADKVLADVPCTGIGIIRKKPDIKLKNYTKSEISQLVETQYKILDSSSKY 367
Query: 257 QKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
KK G +VYSTC+I EN +VI L
Sbjct: 368 VKK--------DGF--LVYSTCTIGVEENHNVIMKFL 394
>gi|168704061|ref|ZP_02736338.1| Fmu, rRNA SAM-dependent methyltransferase:Nop2p [Gemmata
obscuriglobus UQM 2246]
Length = 465
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/234 (33%), Positives = 112/234 (47%), Gaps = 23/234 (9%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
P +VRVN L+ +S ++L Q + + P L + P G +Q
Sbjct: 217 PLWVRVNKLRASRESYRIQLAAQTIEVEPGEHPQALRFSQHHSIRDLPGYAEGDFAVQDH 276
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER---VRRLKDT 181
+S +VA+AL +PG ++LDAC+APG KT HL LM G+G I AC+++ +R V L
Sbjct: 277 SSMLVASALGVQPGMRILDACAAPGGKTTHLMELMDGRGHITACDIDPKRLETVAALAQR 336
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
++L+G + + + P D A L+D CS +G R +
Sbjct: 337 MRLTGIETVLLKDNEEFPAGPFD-------AALVDVPCSNTGVIGRRPEVRW-------R 382
Query: 242 ADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
P E E L +L Q + L A PG VVYSTCSI ENE V+K+VL
Sbjct: 383 LKPNEFEYLIRL---QTRLLILAADRVKPGGA-VVYSTCSIEPDENEGVVKAVL 432
>gi|228954142|ref|ZP_04116170.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar kurstaki str. T03a001]
gi|229071363|ref|ZP_04204586.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
F65185]
gi|229081120|ref|ZP_04213630.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock4-2]
gi|228702164|gb|EEL54640.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock4-2]
gi|228711817|gb|EEL63769.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
F65185]
gi|228805462|gb|EEM52053.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar kurstaki str. T03a001]
Length = 429
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKSGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 372 EQVIEKFL 379
>gi|317133047|ref|YP_004092361.1| sun protein [Ethanoligenens harbinense YUAN-3]
gi|315471026|gb|ADU27630.1| sun protein [Ethanoligenens harbinense YUAN-3]
Length = 436
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 89/261 (34%), Positives = 121/261 (46%), Gaps = 24/261 (9%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLI 114
L Q VP P VRVNTL+ D+ EL + + D VPD L+L DL P
Sbjct: 172 LEQLNAVP-PLAVRVNTLRTTPDALRAELAEAGIEAAPDASVPDALLLSHSADLRTLPAF 230
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
GC F+Q AS M AAL P+PG V D C+APG K+ LA M+G+G + A +L+ R
Sbjct: 231 TEGCFFVQDIASQMACAALDPQPGETVYDLCAAPGGKSFTLALHMRGQGMVRAFDLHAHR 290
Query: 175 VRRLKDT---IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
VR +++ + LSG V D +P PA +L D CSG G + +
Sbjct: 291 VRLIEEGAGWLGLSGIVQASVR--DATGGEPLPPADR----VLCDVPCSGLGVIRRKPEI 344
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKS 291
+P + L L L GV +VYSTC+++ ENE V++
Sbjct: 345 --------RYKNPKIFDGLPDLQYHILCDGAANLKPGGV--LVYSTCALNPAENEAVVRR 394
Query: 292 VLPIAMSFGFQLATPFPNGTA 312
L GF+ PFP+ A
Sbjct: 395 FLD--GHAGFE-PVPFPSAPA 412
>gi|325290449|ref|YP_004266630.1| sun protein [Syntrophobotulus glycolicus DSM 8271]
gi|324965850|gb|ADY56629.1| sun protein [Syntrophobotulus glycolicus DSM 8271]
Length = 461
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/278 (30%), Positives = 130/278 (46%), Gaps = 22/278 (7%)
Query: 18 WPVGDAE--KFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM 75
WP E ++L + Q A+ L R ++ E L + ++P P +R NTLK+
Sbjct: 144 WPDQKKEPARYLAVKYSHPQWLAARWLARWGLEETEKLCI---SNNLPAPTCIRTNTLKI 200
Query: 76 DVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALA 134
++ V L + + V P+ L + L G +Q ++S +VA L
Sbjct: 201 SRENLVSRLENEGIQVTLSAKTPEGLFIEDFGALDELLSYQEGLFTVQDESSQLVAHILG 260
Query: 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 194
KPG +VLD C APG KT HLA LM +G I+ +L ++ + + ++ G I+
Sbjct: 261 VKPGERVLDVCCAPGGKTTHLAQLMNNQGTIIGNDLYPAKLSLVNELVERLGIGIIQTQA 320
Query: 195 GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLS 254
GD L+ + + +V L+D CSG G R D +E E + +LS
Sbjct: 321 GDAGILEGIEGRFDKV---LVDAPCSGLGVIRRRADLRW---------QKSEQE-IKELS 367
Query: 255 AFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIK 290
QKK L A F PG E +VYSTC+I EN +V+K
Sbjct: 368 EIQKKILLRAADFVAPGGE-MVYSTCTIEPEENFEVVK 404
>gi|229104427|ref|ZP_04235096.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-28]
gi|228679125|gb|EEL33333.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock3-28]
Length = 354
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 71 LETAEKMCEVNMLPPVP---TARVNVDKVTVEEAIELLASEGIEAKSGDLSNDAIQIERG 127
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 128 NVAHTEAF-KKGFLSIQDESSMLVARALDPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 186
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G NIE D + + A IL+D CSG G
Sbjct: 187 MSLDLHAHKVRLIKQQAERLGLENIETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 245
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 246 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 296
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 297 EQVIDKFL 304
>gi|134299563|ref|YP_001113059.1| sun protein [Desulfotomaculum reducens MI-1]
gi|134052263|gb|ABO50234.1| sun protein [Desulfotomaculum reducens MI-1]
Length = 453
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 86/283 (30%), Positives = 130/283 (45%), Gaps = 39/283 (13%)
Query: 15 HPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
HP W V E++LM + E +AL Q + P P VR NTLK
Sbjct: 153 HPTWLV---ERWLMQY------------------GFEQTIALCQANNRPAPNTVRTNTLK 191
Query: 75 MDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL 133
+ + + L + V ++ VP+ L L G +Q ++S +VA L
Sbjct: 192 ISREDLMARLKAEGVEARETKFVPEGLNLSGFLSYRTLKSFQGGFFQVQDESSMLVAHVL 251
Query: 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL 193
P G KVLD SAPG KT HLA LM G+I+A ++ ++ + D + G +I+
Sbjct: 252 NPSSGAKVLDVASAPGGKTTHLAQLMGDSGQIIAFDIYSHKLDLIMDNCRRLGIQSIQAE 311
Query: 194 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKL 253
D +L K +++ +L+D CSG G R D S DP+++ + +L
Sbjct: 312 VADARDLHKKYQGWADY--VLVDAPCSGLGVLRRRPD-------SRWRKDPSQLPGIVRL 362
Query: 254 SAFQKKALRHA---LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
QK+ L+ A L GV +VYSTC+I + EN V++ L
Sbjct: 363 ---QKEILQSAAQCLRPGGV--LVYSTCTITKEENIGVVEEFL 400
>gi|55377492|ref|YP_135342.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula marismortui ATCC
43049]
gi|55230217|gb|AAV45636.1| tRNA and rRNA cytosine-C5-methylases [Haloarcula marismortui ATCC
43049]
Length = 318
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 84/252 (33%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
I+D A + P P +RVNT+K V+ L + D L +LP PG
Sbjct: 26 IDDFEAFIDACERPLPSAIRVNTIKATVERVRTALADADIAYDPVDWHDGLFVLPEDSPG 85
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ +G + Q + S + A L P+PG +V DAC+APG+KT LAALM+ G++
Sbjct: 86 ANW----PYFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTTQLAALMEDTGEV 141
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLN--LDPKDPAYSEVRAILLDPSCSGSG 223
VA + N R+ L+ + GA + V H D N L P D + RA L+D CS G
Sbjct: 142 VATDNNLGRISALRTNTERLGATTVAVTHEDGRNHSLKPFDGEGYD-RA-LVDVPCSCEG 199
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIH 281
T + D L + + + +S QK L+ A+ PG VVYSTC+
Sbjct: 200 TIRKNPDTL----------EDWSLSHVEGISGVQKGILKRAVEVTEPG-GTVVYSTCTFA 248
Query: 282 QVENEDVIKSVL 293
ENE V+ VL
Sbjct: 249 PEENEAVLDYVL 260
>gi|423426001|ref|ZP_17403032.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3X2-2]
gi|423437320|ref|ZP_17414301.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4X12-1]
gi|423503457|ref|ZP_17480049.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HD73]
gi|449090808|ref|YP_007423249.1| ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar kurstaki str. HD73]
gi|401110748|gb|EJQ18647.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3X2-2]
gi|401120475|gb|EJQ28271.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG4X12-1]
gi|402459678|gb|EJV91415.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HD73]
gi|449024565|gb|AGE79728.1| ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar kurstaki str. HD73]
Length = 444
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKSGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIEKFL 394
>gi|170063668|ref|XP_001867201.1| williams-beuren syndrome critical region protein [Culex
quinquefasciatus]
gi|167881252|gb|EDS44635.1| williams-beuren syndrome critical region protein [Culex
quinquefasciatus]
Length = 468
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 69/175 (39%), Positives = 93/175 (53%), Gaps = 18/175 (10%)
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
LQ KA + L P V+D C+APG KT HLA LMK KG++ A E + R + L D
Sbjct: 73 LQNKACLLPTYLLNPAKKSVVMDMCAAPGLKTTHLANLMKNKGRVYAVERDANRYKLLCD 132
Query: 181 TIKLSGAANIEVLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
G I+ ++ D L + D + P V ILLDPSCSGSG +D L
Sbjct: 133 YSADFGV--IKTINDDCLLVGDEQAPG---VEYILLDPSCSGSGM----VDRL------- 176
Query: 240 HTADPTEMERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENEDVIKSVL 293
+ + +RL +L Q K L HA++ FP +R+VYSTCSI ENE +++ L
Sbjct: 177 KLNEEIDKQRLYRLGGLQYKLLTHAMNAFPAAKRIVYSTCSIFPEENEAIVQGAL 231
>gi|296331149|ref|ZP_06873623.1| RNA-binding Sun protein [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305674305|ref|YP_003865977.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
subsp. spizizenii str. W23]
gi|296151793|gb|EFG92668.1| RNA-binding Sun protein [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305412549|gb|ADM37668.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus subtilis
subsp. spizizenii str. W23]
Length = 447
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 26/240 (10%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+ DL D + L G H NG V
Sbjct: 176 IPPRQTLRVNQMKADRADLLDQMAAEGIEVENGDLAEDAVKLLKGSIAGTH-FFQNGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+ LM+ KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIGELMENKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYS----EVRAILLDPSCSGSGTAAERLDHLLPSH 236
G I D +D + + + IL+D CSG G + D
Sbjct: 295 AADRLGLTII-----DAKTMDARKAGETFENGQFDRILVDAPCSGFGVIRRKPDM----- 344
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + ENE+VI + +
Sbjct: 345 --KYTKKPDDSTRLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENEEVIHAFI 397
>gi|57640807|ref|YP_183285.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus kodakarensis KOD1]
gi|57159131|dbj|BAD85061.1| tRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family [Thermococcus
kodakarensis KOD1]
Length = 309
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E +A+ + + P PR RVNTL+++V L K+ F ++ + L +
Sbjct: 24 ERALAIAEAMERPLPRCFRVNTLRIEVHKLTKLLNKKGFQFKRVPWAREGFCLTREPFSI 83
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P ++G +++Q +S AL PKPG V D +APG KT ++A LM+ G I A
Sbjct: 84 TSTPEYLSGLLYIQEASSMYPPVALGPKPGEVVADMAAAPGGKTSYMAQLMENGGIIYAF 143
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ ++R+R + + G N + H L++D E ILLD C+GSGT
Sbjct: 144 DVGEDRLRETRLNLSRLGVTNTILFHSSSLHIDELG---VEFDKILLDAPCTGSGTI--- 197
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVEN 285
H P + T ME + Q K L LS GV +VYSTCS+ EN
Sbjct: 198 --HKNPERKANRT-----MEDVKFCQGLQMKLLEKGLSVLKKGGV--LVYSTCSLEPEEN 248
Query: 286 EDVIKSVL 293
E VI+ VL
Sbjct: 249 EFVIQWVL 256
>gi|149372985|ref|ZP_01891941.1| putative sun protein [unidentified eubacterium SCB49]
gi|149354345|gb|EDM42912.1| putative sun protein [unidentified eubacterium SCB49]
Length = 403
Score = 99.0 bits (245), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 121/243 (49%), Gaps = 18/243 (7%)
Query: 65 PRYVRVNTLK---MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P +RVNTLK +DV + + +L + + K VP+ L+L ++ NG +
Sbjct: 150 PVVLRVNTLKAKVIDVKNQLSDLDIETISVKG--VPNALVLKERANVFTTDAFKNGWFEV 207
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q S VA L PKPG +++DAC+ G K++H++ +M+ KG++++ ++ + +++ LK
Sbjct: 208 QDANSQKVALMLDPKPGQRIVDACAGAGGKSLHISEMMENKGQLISMDIYESKLKELKRR 267
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
K +GA NIE D + K +S +L+D CSG G D T
Sbjct: 268 AKRNGAHNIETRVIDSTKVIKK--LHSSADKVLIDAPCSGLGVLKRNPD----------T 315
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
+ + L+++ QK+ LR + ++Y+TCSI ENE +K+ L
Sbjct: 316 KWKMQPDFLDRIRTLQKELLRDYSKMVKEDGELLYATCSILPSENEQQVKAFLKTEEGAS 375
Query: 301 FQL 303
F+L
Sbjct: 376 FEL 378
>gi|76802670|ref|YP_330765.1| rRNA methylase [Natronomonas pharaonis DSM 2160]
gi|76558535|emb|CAI50127.1| tRNA/rRNA cytosine-C5-methylase [Natronomonas pharaonis DSM 2160]
Length = 303
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 81/251 (32%), Positives = 117/251 (46%), Gaps = 22/251 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDS---AVLELGKQFVVQKDDLVPDLLILPPGC 106
++D A ++ + P P VRVN +K +S A E G + + D L L G
Sbjct: 11 VDDPAAFHEACERPLPSVVRVNRIKATAESVRQAFDEAGVDY--EPVDWHDGLFRLGEGE 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
V+G V+ Q + S++ A ALAP+PG +VLD C+APG+KT LAALM +G +V
Sbjct: 69 SPGNSWPFVHGWVYGQEEVSAVPALALAPQPGERVLDCCAAPGSKTTQLAALMDDRGLLV 128
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
+ N R+ L+ + G NI V D NL K L+D CS GT
Sbjct: 129 GNDNNLGRLSALRSNAERCGVTNIAVTRQDARNLSLKPFGGERFDRTLVDVPCSCEGTVR 188
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER----VVYSTCSIHQ 282
+ D + D ++ + ++ QK L A+ V R VVYSTC+
Sbjct: 189 KNPDAV----------DGWSLDHIEGIAGVQKAILERAIE---VTRDGGTVVYSTCTFAP 235
Query: 283 VENEDVIKSVL 293
ENE V++ L
Sbjct: 236 EENEAVLQHAL 246
>gi|365159358|ref|ZP_09355539.1| ribosomal RNA small subunit methyltransferase B [Bacillus sp.
7_6_55CFAA_CT2]
gi|363625356|gb|EHL76397.1| ribosomal RNA small subunit methyltransferase B [Bacillus sp.
7_6_55CFAA_CT2]
Length = 444
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKSGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIEKFL 394
>gi|289578506|ref|YP_003477133.1| sun protein [Thermoanaerobacter italicus Ab9]
gi|289528219|gb|ADD02571.1| sun protein [Thermoanaerobacter italicus Ab9]
Length = 444
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 132/278 (47%), Gaps = 25/278 (8%)
Query: 22 DAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLM-ALYQTPDVPKPRYVRVNTLKMDV-DS 79
D K+LM+ + +LL + E L+ +L + P + RVNTLK+D+ D
Sbjct: 136 DLRKYLMVTYSYPDWIVERLLNNYDEEKAEALLKSLNEKPKIC----YRVNTLKIDIEDL 191
Query: 80 AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139
L + + V +K + + L + + H L G +++Q +AS +V+ L P G
Sbjct: 192 KKLLVSRGIVYKKGYYLEEALYIDIK-NPESHQLYKEGLIYIQDEASMLVSKILNPNEGE 250
Query: 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI--EVLHGDF 197
VLD C+APG KT H+A LMK G +VA +L+ R+ +K+ K G N+ E F
Sbjct: 251 TVLDVCAAPGGKTTHIAQLMKNTGNVVAFDLHPHRLELIKENCKRLGITNVKAEAFDSTF 310
Query: 198 LNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD--PTEMERLNKLSA 255
+N D + +L D C+G G ++ D L ++ + T+ + L+ S
Sbjct: 311 VN----DKYLEKADKVLADVPCTGIGIIRKKPDIKLKNYTKSEISQLVETQYKILDSSSK 366
Query: 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ KK G +VYSTC+I EN +VI L
Sbjct: 367 YVKK--------DGF--LVYSTCTIGVEENHNVIMKFL 394
>gi|448640022|ref|ZP_21677170.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula sinaiiensis ATCC
33800]
gi|445762549|gb|EMA13770.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula sinaiiensis ATCC
33800]
Length = 303
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 113/250 (45%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
I+D A + P P +RVNT+K V+ L + D L +LP PG
Sbjct: 11 IDDFEAFIDACERPLPSAIRVNTIKATVERVRTALADADIAYDPVDWHDGLFVLPEDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ +G + Q + S + A L P+PG +V DAC+APG+KT LAALM G++
Sbjct: 71 ANWP----YFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTTQLAALMDDTGEV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA + V H D N K L+D CS GT
Sbjct: 127 VATDNNLGRISALRTNTERLGATTVAVTHEDGRNHSLKPFGGEGYDRALVDVPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
+ D L + + + +S QK L+ A+ PG VVYSTC+
Sbjct: 187 RKNPDTL----------EDWSLSHVEGISGVQKGILKRAVEVTEPG-GTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE V+ VL
Sbjct: 236 ENEAVLDYVL 245
>gi|423084336|ref|ZP_17072841.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 002-P50-2011]
gi|423088032|ref|ZP_17076417.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 050-P50-2011]
gi|357542641|gb|EHJ24683.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 002-P50-2011]
gi|357543560|gb|EHJ25577.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 050-P50-2011]
Length = 441
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 119/237 (50%), Gaps = 15/237 (6%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
Y+R NTLK+ + + +L + +V K +V + + + ++ + L G +Q +
Sbjct: 179 YIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFTIQDIS 238
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S +V + PK G VLD CSAPG K+ HLA LM G++VA ++ + +++ +K T+
Sbjct: 239 SMIVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLIKSTVNRL 298
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
G N+ V D +D + + S+ +L D CSG G + P
Sbjct: 299 GLKNVFVERFDASEID--ENSISKFDYVLADVPCSGFGIIRRK-----PE------IKYK 345
Query: 246 EMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGF 301
+ E L +++ QKK L +A + V +VYSTC+I VEN +++ S + +F F
Sbjct: 346 KEEELKDITSIQKKILENASKYVKVGGTLVYSTCTIQDVENINIVTSFVEENHNFEF 402
>gi|154685990|ref|YP_001421151.1| RsmB [Bacillus amyloliquefaciens FZB42]
gi|154351841|gb|ABS73920.1| RsmB [Bacillus amyloliquefaciens FZB42]
Length = 447
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 123/238 (51%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D ++ + E+ + DL PD + L G + NG V
Sbjct: 176 IPPKQTLRVNHIKSDRETVLNEMENAGLEAEAGDLSPDAIKLLKGSIANT-AFFQNGRVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LM+ +G + + +L++ +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
+ G + ++ ++ A+ R +L+D CSG G + D
Sbjct: 295 GAERLG---LTIIDAQTMDARKAGEAFGAERFDRVLVDAPCSGFGVIRRKPDM------- 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + R LS Q LR P V++ +VYSTC++ + ENE+V+ + +
Sbjct: 345 KYTKTPEDSRR---LSEIQLGILREIA--PLVKKGGTLVYSTCTMDRTENEEVMHAFI 397
>gi|347523755|ref|YP_004781325.1| Fmu (Sun) domain containing protein [Pyrolobus fumarii 1A]
gi|343460637|gb|AEM39073.1| Fmu (Sun) domain protein [Pyrolobus fumarii 1A]
Length = 433
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/234 (32%), Positives = 123/234 (52%), Gaps = 18/234 (7%)
Query: 65 PRYVRVNTLKMDVDSAVL---ELGKQFVVQKDDLVPDL-LILPPGCDLHVHPLIVNGCVF 120
P +RVNTLK D L E G++ ++ P+ +I+ DLH +I + +
Sbjct: 166 PVSLRVNTLKASYDRVWLILEEEGRE--PRRSRWAPEWGVIVGNPRDLHESRVIRHALAY 223
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q +AS + + L PKPG V D +APG KT+H+AALM +G+IVA ++++ + R L+
Sbjct: 224 PQDEASIVASLVLDPKPGELVFDLTAAPGGKTLHMAALMGNRGRIVAIDVSRLKARLLER 283
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
++ GA +EV D P+ S ++LD C+ SGT A D
Sbjct: 284 NVERHGARIVEVRVMDARE-APRVYGESVADRVMLDAPCTSSGTLARNPDLRW------- 335
Query: 241 TADPTEMERLNKLSA-FQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P E+ ++++L + A+R L+ PG R++Y+TCSI E E+V+K +L
Sbjct: 336 RITPEEVYKMHRLQVELLEAAVR--LAKPGA-RILYATCSIFPEEGEEVVKKIL 386
>gi|282901368|ref|ZP_06309293.1| Fmu, rRNA SAM-dependent methyltransferase [Cylindrospermopsis
raciborskii CS-505]
gi|281193647|gb|EFA68619.1| Fmu, rRNA SAM-dependent methyltransferase [Cylindrospermopsis
raciborskii CS-505]
Length = 446
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 115/244 (47%), Gaps = 22/244 (9%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVD--SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPL 113
+ QTP + +RVN L+ V+ +V + + + L L ++ P + P
Sbjct: 177 MNQTPTID----LRVNILRASVEMVESVFKKSGILLHRIPHLPQGLRLVGPAGPIQNLPG 232
Query: 114 IVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKE 173
G +Q A+ +V L P+PG ++D C+APG KT H+A LM GKI AC+
Sbjct: 233 FTEGWWCIQDAAAQLVGHLLDPRPGEVIIDVCAAPGGKTTHIAELMGDNGKIYACDRTPS 292
Query: 174 RVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL 233
R+R+L + + +IE+ GD N + +LLD CSG GT D
Sbjct: 293 RLRKLSENAQRLRLQSIEIFPGDSRNF---TKFHHLADRVLLDAPCSGLGTMHRHADARW 349
Query: 234 PSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKS 291
+ S + L+ Q++ + H +F PG +VY+TC++H ENE++I+
Sbjct: 350 RQNLSS----------VGDLAHIQRELISHTANFVKPG-GVLVYATCTLHPQENEELIRE 398
Query: 292 VLPI 295
L +
Sbjct: 399 FLHV 402
>gi|228940953|ref|ZP_04103512.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar berliner ATCC 10792]
gi|228973882|ref|ZP_04134458.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228980472|ref|ZP_04140782.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis Bt407]
gi|228779292|gb|EEM27549.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis Bt407]
gi|228785907|gb|EEM33910.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar thuringiensis str. T01001]
gi|228818789|gb|EEM64855.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar berliner ATCC 10792]
Length = 429
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 372 EQVIDKFL 379
>gi|229129141|ref|ZP_04258114.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-Cer4]
gi|228654378|gb|EEL10243.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BDRD-Cer4]
Length = 429
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQK-DDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKLGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 372 EQVIEKFL 379
>gi|313888508|ref|ZP_07822175.1| ribosomal RNA small subunit methyltransferase B [Peptoniphilus
harei ACS-146-V-Sch2b]
gi|312845537|gb|EFR32931.1| ribosomal RNA small subunit methyltransferase B [Peptoniphilus
harei ACS-146-V-Sch2b]
Length = 430
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 73/246 (29%), Positives = 122/246 (49%), Gaps = 33/246 (13%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +RVNTLK++ D + L + F +++ V L +L P + G ++Q
Sbjct: 176 PFTIRVNTLKINRDELIKNLTESGFDIEETTYVNALNVLNPNGIIDTE-FFEKGHFYVQD 234
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
S +V+ L P KVLD C+APG KT HL+ LM G+I++C+ +K +++ +K+ +
Sbjct: 235 LGSILVSTFLNPSKDSKVLDLCAAPGGKTTHLSELMDNTGEIISCDKSKGKIKLIKENAE 294
Query: 184 LSGAANI-------EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
G NI VL+ +F+N + +L+D CSG+G ++ D
Sbjct: 295 RLGCTNISPMVNDARVLNEEFIN---------KFDYVLVDAPCSGTGLYRKKPD---IKW 342
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVIKSVL 293
G + L +L Q + L A + G+ ++YSTCS+ ++ENEDVI++ L
Sbjct: 343 NKG-------IYDLKELGVIQLEILNKAKEYVREKGL--LLYSTCSLSKIENEDVIENFL 393
Query: 294 PIAMSF 299
+F
Sbjct: 394 KENENF 399
>gi|30021953|ref|NP_833584.1| sun protein [Bacillus cereus ATCC 14579]
gi|29897509|gb|AAP10785.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus cereus ATCC 14579]
Length = 444
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQK-DDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + K DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKLGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIEKFL 394
>gi|423385368|ref|ZP_17362624.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1X1-2]
gi|401635424|gb|EJS53179.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1X1-2]
Length = 444
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 387 EQVIDKFL 394
>gi|384187925|ref|YP_005573821.1| sun protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|410676239|ref|YP_006928610.1| ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis Bt407]
gi|423528274|ref|ZP_17504719.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB1-1]
gi|452200304|ref|YP_007480385.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
gi|326941634|gb|AEA17530.1| sun protein [Bacillus thuringiensis serovar chinensis CT-43]
gi|402451937|gb|EJV83756.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuB1-1]
gi|409175368|gb|AFV19673.1| ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis Bt407]
gi|452105697|gb|AGG02637.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar thuringiensis str. IS5056]
Length = 444
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 387 EQVIDKFL 394
>gi|90080884|dbj|BAE89923.1| unnamed protein product [Macaca fascicularis]
Length = 163
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 51/109 (46%), Positives = 69/109 (63%), Gaps = 8/109 (7%)
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+G + E+ DFL + P DP Y EV ILLDPSCSGSG + +L+ T P
Sbjct: 8 AGISCCELAEEDFLAVSPSDPRYREVHYILLDPSCSGSGMPSRQLEE-----PGAGTPSP 62
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL+ L+ FQ++AL HAL+FP ++R+VYSTCS+ Q ENEDV++ L
Sbjct: 63 A---RLHALAGFQQRALCHALTFPSLKRLVYSTCSLCQEENEDVVRDAL 108
>gi|228992593|ref|ZP_04152520.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
pseudomycoides DSM 12442]
gi|228998641|ref|ZP_04158228.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
Rock3-17]
gi|228761109|gb|EEM10068.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
Rock3-17]
gi|228767227|gb|EEM15863.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
pseudomycoides DSM 12442]
Length = 415
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 117/233 (50%), Gaps = 12/233 (5%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
VP RVN K+ V+ A+ L ++ V ++ DL D + + G H NG +
Sbjct: 144 VPPVPTARVNVDKITVEEAIALLEREGVQAKRGDLSEDAIQIEKGNVAHTEAF-KNGFLS 202
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL P+ G VLD+C+APG KT H+A +KG G++ + +L+ +VR ++
Sbjct: 203 IQDESSMLVARALKPEEGDMVLDSCAAPGGKTTHIAERLKGTGQVTSLDLHPHKVRLIQQ 262
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
K NIE D + + A IL+D CSG G + D L G
Sbjct: 263 QAKRLELENIETKALDARKVQ-EHFANESFDKILVDAPCSGFGVIRRKPDIKL-----GK 316
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+E +LS +K A L G R+VYSTC+I ++ENE VI+ L
Sbjct: 317 EKGDSERLSTIQLSILEKVA--PLLKAGG--RLVYSTCTIEKIENEQVIEQFL 365
>gi|329926565|ref|ZP_08280978.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
HGF5]
gi|328939106|gb|EGG35469.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
HGF5]
Length = 442
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 81/278 (29%), Positives = 137/278 (49%), Gaps = 25/278 (8%)
Query: 22 DAEKFLMLHKGAIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
DA++ +LH + Q LV + E A+ + P VRVNT + D
Sbjct: 132 DAQRISLLH------SHPQWLVERWISQYGTEAAEAICAANNEPPAVSVRVNTTMISRDD 185
Query: 80 AVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPG 138
+ +G + + P +++ ++ + +G + +Q ++S +VA A+ P+PG
Sbjct: 186 MLKLMGSHGLDASPSSVSPYGIVVKGAGNMALTDWYRDGMISIQDESSMLVAEAVQPEPG 245
Query: 139 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198
+VLD C+APG K+ H+ LMK +G IVA +++ + + + D G +I ++ GD L
Sbjct: 246 MRVLDCCAAPGGKSAHMGELMKDEGSIVANDIHAHKGKLISDQASRLGLDSISIVTGDAL 305
Query: 199 NL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQ 257
+L D +PA + ILLD CSG G + P G + E +++++A Q
Sbjct: 306 DLADRFEPASFD--RILLDAPCSGLGVIRRK-----PDLKWGKS-----QEDIHEIAALQ 353
Query: 258 KKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+ L + PG +VYSTC+I +ENE VI + L
Sbjct: 354 LRLLESVSTLLRPG-GILVYSTCTIEPMENEGVISAFL 390
>gi|33862543|ref|NP_894103.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9313]
gi|33640656|emb|CAE20445.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9313]
Length = 451
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/199 (35%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 97 PD-LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
PD L++ DL P G +Q ++S +VA L P+PG ++LDAC+APG K HL
Sbjct: 229 PDGLMVTGSAGDLSQWPGYQQGHWCVQDRSSQLVAPLLRPQPGDRILDACAAPGGKATHL 288
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY-SEVRAIL 214
LM G G++ A + + R++RL D G + L D NL P++ + IL
Sbjct: 289 VELMGGSGEVWAVDRSAGRLKRLADNAARLGGDCLNALVADASNLLAVKPSWRGSFQRIL 348
Query: 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVV 274
+D CSG GT A D + P ++E L L + + L LS G R+V
Sbjct: 349 VDAPCSGLGTLARHAD-------ARWRVTPLQVEGLVILQSKLLEGLLPLLSSGG--RLV 399
Query: 275 YSTCSIHQVENEDVIKSVL 293
Y+TC+IH EN D I++ L
Sbjct: 400 YATCTIHPAENFDQIEAFL 418
>gi|83589751|ref|YP_429760.1| sun protein [Moorella thermoacetica ATCC 39073]
gi|83572665|gb|ABC19217.1| sun protein [Moorella thermoacetica ATCC 39073]
Length = 457
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/242 (31%), Positives = 116/242 (47%), Gaps = 20/242 (8%)
Query: 63 PKPRYVRVNTLKM--DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
P P RVNTLK DV +A L+ + V+ P+ L++ L P G +
Sbjct: 184 PPPTIARVNTLKTRKDVLAARLQ-AEGATVRPARYAPEGLVVEGLGALEASPSFQEGLFY 242
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q + S +V+ AL P G V+DA +APG KT HLA LM +G I+AC++++ R+ +
Sbjct: 243 VQDEGSQLVSHALHPDSGAWVIDASAAPGGKTTHLAQLMADRGTILACDVHRGRLDLIAA 302
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+ G + + D L + PA ++ +L+D CSG G R D A
Sbjct: 303 NCRRLGVTCVRTVLVDARELGERYPAAADY--LLIDAPCSGLGVLRRRPDARWRKEAP-- 358
Query: 241 TADPTEMERLNKLSAFQKKAL---RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
R +L+ Q L R AL GV +VYSTC++ EN++V++ L A
Sbjct: 359 --------RTRELARLQLAILMGARQALKPGGV--LVYSTCTLLPEENQEVVREFLERAG 408
Query: 298 SF 299
F
Sbjct: 409 EF 410
>gi|354565440|ref|ZP_08984615.1| sun protein [Fischerella sp. JSC-11]
gi|353549399|gb|EHC18841.1| sun protein [Fischerella sp. JSC-11]
Length = 491
Score = 98.6 bits (244), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 80/244 (32%), Positives = 121/244 (49%), Gaps = 26/244 (10%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLIL--PPGCDLHVHP 112
+ QTP + +RVN L+ D+++ L + Q+ +P L L PG + P
Sbjct: 217 MNQTPAID----LRVNPLRADLETVEAALQAAGISCQRLSHLPQALRLLSHPG-QIQNLP 271
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
G +Q ++ +V L P+ V+D+C+APG KT H+A LM+ GKI AC+
Sbjct: 272 GFNQGWWSIQDSSAQLVGHFLDPQIKEVVIDSCAAPGGKTTHIAELMQDTGKIWACDRTA 331
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
R+R+L++ ++ +IE+ GD NL + V LLD CSG GT
Sbjct: 332 SRMRKLQENMQRLHLKSIEICIGDSRNLSQFRNSADRV---LLDAPCSGLGT-------- 380
Query: 233 LPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVI 289
L HA + + +LS QK+ L H +F GV +VY+TC++H ENE VI
Sbjct: 381 LHRHADARWRQTP--DSVKELSVLQKELLSHTSTFVKEGGV--LVYATCTLHPAENETVI 436
Query: 290 KSVL 293
+S L
Sbjct: 437 ESFL 440
>gi|228902369|ref|ZP_04066525.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis IBL 4222]
gi|228857267|gb|EEN01771.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis IBL 4222]
Length = 429
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + + IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFSNETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 372 EQVIDKFL 379
>gi|229111336|ref|ZP_04240889.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock1-15]
gi|228672112|gb|EEL27403.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
Rock1-15]
Length = 429
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNTGDAVLDSCAAPGGKTTHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + + IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFSNETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQIAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 372 EQVIEKFL 379
>gi|119590103|gb|EAW69697.1| hCG39703, isoform CRA_f [Homo sapiens]
Length = 324
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/165 (38%), Positives = 85/165 (51%), Gaps = 25/165 (15%)
Query: 24 EKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPK--PRYVRVNTLKMDVDSAV 81
+ L H+ ++ LA+L V V EDL+ + P PR+VRVNTLK D V
Sbjct: 35 KALLGRHQARLKAELARLKVHRGVSRNEDLLEVGSRPGPASQLPRFVRVNTLKTCSDDVV 94
Query: 82 LEL---------------------GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
GK F++ D L+P+LL+ P DLH HPL G +
Sbjct: 95 DYFKRQGFSYQGRASSLDDLRALKGKHFLL--DPLMPELLVFPAQTDLHEHPLYRAGHLI 152
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
LQ +AS + A L P PG V+DAC+APGNKT HLAAL+K +G +
Sbjct: 153 LQDRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGSL 197
>gi|158257646|dbj|BAF84796.1| unnamed protein product [Homo sapiens]
Length = 135
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/133 (40%), Positives = 73/133 (54%)
Query: 96 VPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
+P+LL+ P DLH HPL G + LQ +AS + A L P+ KT HL
Sbjct: 1 MPELLVFPAQTDLHEHPLYRAGHLILQDRASCLPAMLLDPRQAPMSWMPVPPQAIKTSHL 60
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
AAL+K +GKI A +L+ R+ + + +G + E+ DFL + P DP Y EV +LL
Sbjct: 61 AALLKNQGKIFAFDLDARRLASMATLLAWAGVSCCELAEEDFLAVSPLDPRYREVHYVLL 120
Query: 216 DPSCSGSGTAAER 228
DPSCSGSG R
Sbjct: 121 DPSCSGSGEMVRR 133
>gi|228966815|ref|ZP_04127859.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar sotto str. T04001]
gi|228792914|gb|EEM40472.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis serovar sotto str. T04001]
Length = 429
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + + IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFSNETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 372 EQVIDKFL 379
>gi|218899018|ref|YP_002447429.1| sun protein [Bacillus cereus G9842]
gi|402564793|ref|YP_006607517.1| 16S rRNA methyltransferase B [Bacillus thuringiensis HD-771]
gi|423359099|ref|ZP_17336602.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD022]
gi|423561729|ref|ZP_17538005.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-A1]
gi|218546015|gb|ACK98409.1| sun protein [Bacillus cereus G9842]
gi|401084971|gb|EJP93217.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD022]
gi|401201986|gb|EJR08851.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-A1]
gi|401793445|gb|AFQ19484.1| 16S rRNA methyltransferase B [Bacillus thuringiensis HD-771]
Length = 444
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + + IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFSNETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 387 EQVIDKFL 394
>gi|423518555|ref|ZP_17495036.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA2-4]
gi|401160763|gb|EJQ68138.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
HuA2-4]
Length = 444
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 120/249 (48%), Gaps = 17/249 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ AV L + + ++ +L D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAVALLADEGIEAKRGELSEDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A + G GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNKGDTVLDSCAAPGGKTTHIAERLDGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR ++ K G N+E + D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIEQQAKRLGLENVETMALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLD-HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
+ D L ++ L K++ K+ R+VYSTC+I ++E
Sbjct: 336 RRKPDIKLGKGKGDSERLSTIQLAILEKIAPLLKQG----------GRLVYSTCTIEKIE 385
Query: 285 NEDVIKSVL 293
NE VIK L
Sbjct: 386 NEQVIKQFL 394
>gi|206976730|ref|ZP_03237634.1| sun protein [Bacillus cereus H3081.97]
gi|206745040|gb|EDZ56443.1| sun protein [Bacillus cereus H3081.97]
Length = 444
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEGAITLLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLGNVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|124023762|ref|YP_001018069.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9303]
gi|123964048|gb|ABM78804.1| Sun protein (Fmu protein) [Prochlorococcus marinus str. MIT 9303]
Length = 450
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/199 (34%), Positives = 101/199 (50%), Gaps = 11/199 (5%)
Query: 97 PD-LLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
PD L++ DL P G +Q +++ +VA L P+PG ++LDAC+APG K HL
Sbjct: 228 PDGLMVTGSAGDLSQWPGYQQGHWCVQDRSAQLVAPLLGPQPGDRILDACAAPGGKATHL 287
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY-SEVRAIL 214
LM G G++ A + + R++RL + G + L D NL P++ + IL
Sbjct: 288 VELMGGSGEVWAVDRSAGRLKRLAENAARLGGDCLHALVADATNLLAVKPSWRGSFQRIL 347
Query: 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVV 274
+D CSG GT A D + P ++E L L + + L LS G R+V
Sbjct: 348 VDAPCSGLGTLARHAD-------ARWRVTPLQVEGLVILQSKLLEGLLPLLSSGG--RLV 398
Query: 275 YSTCSIHQVENEDVIKSVL 293
Y+TC+IH EN D IK+ L
Sbjct: 399 YATCTIHPAENFDQIKAFL 417
>gi|75762655|ref|ZP_00742497.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
gi|74489854|gb|EAO53228.1| 16S rRNA m(5)C 967 methyltransferase [Bacillus thuringiensis
serovar israelensis ATCC 35646]
Length = 368
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 85 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 141
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 142 NVAHTEAF-KKGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 200
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + + IL+D CSG G
Sbjct: 201 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFSNETFDKILVDAPCSGFGVI 259
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 260 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 310
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 311 EQVIDKFL 318
>gi|434376969|ref|YP_006611613.1| 16S rRNA methyltransferase B [Bacillus thuringiensis HD-789]
gi|401875526|gb|AFQ27693.1| 16S rRNA methyltransferase B [Bacillus thuringiensis HD-789]
Length = 444
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPNEGETVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + + IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFSNETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 387 EQVIDKFL 394
>gi|229031495|ref|ZP_04187495.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1271]
gi|228729784|gb|EEL80764.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1271]
Length = 402
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQK-DDLVPDLLILPPG 105
+++ E + + P VP RVN K+ VD A+ L + + K DL D + + G
Sbjct: 119 LETAEKMCEVNMLPPVPT---ARVNVDKITVDEAIELLASEGIEAKHGDLSEDAIQIERG 175
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 176 NVAHTDAF-KKGFLSIQDESSMLVARALDPNEGDVVLDSCAAPGGKTTHIAERLKGTGQV 234
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 235 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 293
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L + + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 294 RRKPDIKLGKNKG-------DSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 344
Query: 286 EDVIKSVL 293
E VIK L
Sbjct: 345 EQVIKQFL 352
>gi|428223826|ref|YP_007107923.1| sun protein [Geitlerinema sp. PCC 7407]
gi|427983727|gb|AFY64871.1| sun protein [Geitlerinema sp. PCC 7407]
Length = 446
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 82/290 (28%), Positives = 138/290 (47%), Gaps = 27/290 (9%)
Query: 29 LHKGAIQLALAQLLVRNKVKSIED--LMALYQTPDVPKPRYVRVNTLKMD---VDSAVLE 83
L + A+Q + ++ + ++D + L Q + P P +RVN L+ V +A+ +
Sbjct: 142 LERLAVQYSYPTWILEVWRQQLDDAGVEQLCQALNQPPPLDLRVNLLRSTPEAVQTALAQ 201
Query: 84 LGKQFVVQKDDLVPDLLIL--PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKV 141
G V + VP L L PG + P G +Q ++ +V+ L P+PG V
Sbjct: 202 AG--IVAEPVPGVPQALRLQGSPGT-ISELPGFKEGWWTVQDSSAQLVSQVLDPRPGETV 258
Query: 142 LDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201
+DAC+APG KT HLA LM +G I AC+ R+R++ ++ G ++ + GD +L
Sbjct: 259 IDACAAPGGKTTHLAELMGDRGTIWACDRYPSRLRKVTQNLQRLGLQSVRLQAGDSRDL- 317
Query: 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL 261
+ +L+D CSG GT L HA + R +L+A Q++ L
Sbjct: 318 --SQFRQQADRVLVDAPCSGLGT--------LNRHADARWRQTPDTAR--ELAALQQEIL 365
Query: 262 RHALSFPGVE-RVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNG 310
A ++ + +VY+TC+++ +ENE V+ + L + P P G
Sbjct: 366 AEAATWVKPQGHLVYATCTLNPLENESVVTAFLQAYPEWAI---APLPEG 412
>gi|147678123|ref|YP_001212338.1| tRNA and rRNA cytosine-C5-methylases [Pelotomaculum
thermopropionicum SI]
gi|146274220|dbj|BAF59969.1| tRNA and rRNA cytosine-C5-methylases [Pelotomaculum
thermopropionicum SI]
Length = 456
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/260 (29%), Positives = 125/260 (48%), Gaps = 12/260 (4%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCD 107
++ +AL + + P P VR NTLK+ D L + V + + P+ L +
Sbjct: 169 GLDHTVALCRANNGPAPNTVRTNTLKITRDGLAERLRNEGLTVSETEFAPEGLKIDGFFS 228
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ G +Q ++S + AL P PG V+DACSAPG KT HLA LM+ +G+I+A
Sbjct: 229 IGSLQSFKEGLFQIQDESSMLAGRALMPAPGAFVIDACSAPGGKTTHLAQLMENRGRILA 288
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+++ ++ +K+ G +E L GD L P++ Y++ IL+D CSG G
Sbjct: 289 VDIHPHKLVLIKENCSRLGINIVEGLAGDAREL-PEN-LYNKADFILVDAPCSGLGVLRR 346
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENED 287
R D + +P ++ + +L + + L GV +VYSTC+I + EN
Sbjct: 347 RPD-------ARWRKEPGQLPAIIQLQREILEGVARCLKKNGV--IVYSTCTITREENLR 397
Query: 288 VIKSVLPIAMSFGFQLATPF 307
++ L F + +PF
Sbjct: 398 QVEWFLDKHPQFVLEDLSPF 417
>gi|229006142|ref|ZP_04163829.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
Rock1-4]
gi|228755095|gb|EEM04453.1| Ribosomal RNA small subunit methyltransferase B [Bacillus mycoides
Rock1-4]
Length = 415
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 78/233 (33%), Positives = 116/233 (49%), Gaps = 12/233 (5%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
VP RVN K+ V+ A+ L ++ V + DL D + + G H NG +
Sbjct: 144 VPPVPTARVNVDKITVEEAIALLEREGVQANRGDLSEDAIQIEKGNVAHTEAF-KNGFLS 202
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL P+ G VLD+C+APG KT H+A +KG G++ + +L+ +VR ++
Sbjct: 203 IQDESSMLVARALKPEEGDMVLDSCAAPGGKTTHIAERLKGTGQVTSLDLHPHKVRLIQQ 262
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
K NIE D + + A IL+D CSG G + D L G
Sbjct: 263 QAKRLELENIETKALDARKVQ-EHFANESFDKILVDAPCSGFGVIRRKPDIKL-----GK 316
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+E +LS +K A L G R+VYSTC+I ++ENE VI+ L
Sbjct: 317 EKGDSERLSTIQLSILEKVA--PLLKAGG--RLVYSTCTIEKIENEQVIEQFL 365
>gi|406831139|ref|ZP_11090733.1| sun protein [Schlesneria paludicola DSM 18645]
Length = 477
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 88/292 (30%), Positives = 131/292 (44%), Gaps = 29/292 (9%)
Query: 10 HTNLRHPLW--PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSI--EDLMALYQTPDVPKP 65
H L P++ P D +L GA L L L VK E+L + + P P
Sbjct: 175 HRILNKPVFFEPESDLPAYL---AGAFSLPL--WLTERWVKRFKPEELFRMGAWFNSPSP 229
Query: 66 RYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
R NTL+ D V + + + + ++ + P V G +Q +
Sbjct: 230 LMARPNTLRSSYDEVVADFQAAGITIQPLEGTESFVIEGTTRVEALPGFVEGKFVIQDFS 289
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+S A LAP+PG +V D C+APG KT HLAALMK +G I+A ++ +R+ + + +
Sbjct: 290 ASRAAVRLAPQPGQRVWDVCAAPGGKTCHLAALMKNEGHILATDIRSDRLEIVHENAQRL 349
Query: 186 GAANIEVL----HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
GA I G L P D AIL+D CS +G A+R + +
Sbjct: 350 GATIIRSQLVDEQGFRLPTGPFD-------AILVDVPCSNTGVLAKRPE-------ARWR 395
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P + LN++ A L+ G R+VYSTCSI ENE++++ VL
Sbjct: 396 ITPDGVRELNRVQANLLGWSLERLTSGG--RLVYSTCSIEPDENENLVRRVL 445
>gi|339264975|ref|XP_003366387.1| ribosomal RNA small subunit methyltransferase F [Trichinella
spiralis]
gi|316955055|gb|EFV46444.1| ribosomal RNA small subunit methyltransferase F [Trichinella
spiralis]
Length = 154
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 51/124 (41%), Positives = 73/124 (58%), Gaps = 1/124 (0%)
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
DLH ++ G + L+ K+S + L +PG VLD C+APGNKT H+A+LM KGKI+
Sbjct: 2 DLHDDNILQTGQLILEDKSSCLPVICLDLEPGTTVLDICAAPGNKTSHMASLMNNKGKII 61
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
+ + +K+RV L+ ++ EV+ DFL DP + V +LLDP CSGSG
Sbjct: 62 SVDHHKDRVMTLRMRLESFKVTCCEVIEQDFLKFSDYDPIFENVTHVLLDPPCSGSG-VV 120
Query: 227 ERLD 230
R+D
Sbjct: 121 NRVD 124
>gi|42782957|ref|NP_980204.1| sun protein [Bacillus cereus ATCC 10987]
gi|42738884|gb|AAS42812.1| sun protein [Bacillus cereus ATCC 10987]
Length = 444
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLGNVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|228909690|ref|ZP_04073513.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis IBL 200]
gi|228849979|gb|EEM94810.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
thuringiensis IBL 200]
Length = 429
Score = 98.2 bits (243), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 122/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 146 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERG 202
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 203 NVAHTEAF-KKGFLSIQDESSMLVARALEPNEGEAVLDSCAAPGGKTTHIAERLKGTGKV 261
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + + IL+D CSG G
Sbjct: 262 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFSNETFDKILVDAPCSGFGVI 320
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 321 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 371
Query: 286 EDVIKSVL 293
E VI L
Sbjct: 372 EQVIDKFL 379
>gi|229197976|ref|ZP_04324690.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus m1293]
gi|228585455|gb|EEK43559.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus m1293]
Length = 360
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 77 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAIALLASEGIEAKRGDLSDDAIQIEKG 133
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 134 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 192
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 193 MSLDLHAHKVRLIKQQAERLGLGNVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 251
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 252 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 302
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 303 EQVIERFL 310
>gi|423406710|ref|ZP_17383859.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-3]
gi|401660000|gb|EJS77483.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG2X1-3]
Length = 444
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKVTVEEAIELLANEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+
Sbjct: 218 NVAHTEAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQADRLGLENVETKALDARKVQ-EHFANESFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E IK L
Sbjct: 387 EQAIKQFL 394
>gi|217961285|ref|YP_002339853.1| sun protein [Bacillus cereus AH187]
gi|222097310|ref|YP_002531367.1| sun protein [Bacillus cereus Q1]
gi|375285788|ref|YP_005106227.1| sun protein [Bacillus cereus NC7401]
gi|423353567|ref|ZP_17331194.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
IS075]
gi|423374338|ref|ZP_17351676.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AND1407]
gi|423567240|ref|ZP_17543487.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-A12]
gi|217064955|gb|ACJ79205.1| sun protein [Bacillus cereus AH187]
gi|221241368|gb|ACM14078.1| sun protein [Bacillus cereus Q1]
gi|358354315|dbj|BAL19487.1| sun protein [Bacillus cereus NC7401]
gi|401089380|gb|EJP97551.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
IS075]
gi|401094250|gb|EJQ02332.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AND1407]
gi|401214328|gb|EJR21058.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-A12]
Length = 444
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEGAIALLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLGNVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|423574529|ref|ZP_17550648.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-D12]
gi|423604508|ref|ZP_17580401.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD102]
gi|401212054|gb|EJR18800.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
MSX-D12]
gi|401245128|gb|EJR51486.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
VD102]
Length = 444
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAIALLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLGNVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|384181679|ref|YP_005567441.1| 16S rRNA methyltransferase B [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324327763|gb|ADY23023.1| 16S rRNA methyltransferase B [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 444
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 83/286 (29%), Positives = 134/286 (46%), Gaps = 33/286 (11%)
Query: 9 LHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYV 68
L T HP+W ++ + A + L ++ E + + P VP
Sbjct: 141 LATATSHPVW---------LVQEWASEYGL---------ETAEKMCEVNMLPPVPT---A 179
Query: 69 RVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
RVN K+ V+ A+ L + + ++ DL D + + G H G + +Q ++S
Sbjct: 180 RVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIERGNVAHTDAF-KKGFLSIQDESSM 238
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+VA AL P G VLD+C+APG KT H+A +KG G++++ +L+ +VR +K + G
Sbjct: 239 LVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGL 298
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+E D + + A IL+D CSG G + D L D +
Sbjct: 299 GNVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVIRRKPDIKLGK-------DKGDS 350
Query: 248 ERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL+ + + + L G R+VYSTC+I ++ENE VI+ L
Sbjct: 351 ERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIENEQVIERFL 394
>gi|434404680|ref|YP_007147565.1| ribosomal RNA small subunit methyltransferase RsmB [Cylindrospermum
stagnale PCC 7417]
gi|428258935|gb|AFZ24885.1| ribosomal RNA small subunit methyltransferase RsmB [Cylindrospermum
stagnale PCC 7417]
Length = 449
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 89/286 (31%), Positives = 132/286 (46%), Gaps = 36/286 (12%)
Query: 19 PVGDAEKFLMLHK---GAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM 75
P E+ +LH IQ+ L QL K E + QTP + +RVN L+
Sbjct: 138 PENPVERLGILHSFPDWIIQVWLEQLGFVETEKLCE---WMNQTPTID----LRVNLLRS 190
Query: 76 ---DVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQGKASSMVAA 131
V+SA G +V++ +P L ++ + P G +Q ++ +V+
Sbjct: 191 SIEQVESAFKSAG--VLVRRIPSLPQALRLIGSTGPIQNLPGFREGWWTVQDSSAQLVSH 248
Query: 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE 191
L P+PG V+D C+APG KT H+A LM GK+ AC+ R+R+L+ + +IE
Sbjct: 249 LLDPQPGEVVIDVCAAPGGKTTHIAELMGDNGKVWACDRTPSRLRKLQQNAQRLNLHSIE 308
Query: 192 VLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
+ GD NL P + +L+D CSG GT + HA E R
Sbjct: 309 ICTGDSRNL----PQFQNTADRVLIDAPCSGLGT--------MHRHADARWRQTPESVR- 355
Query: 251 NKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVIKSVL 293
+LS Q + L H +F GV +VY+TC++H ENE VI L
Sbjct: 356 -ELSLLQTELLAHTSTFVKQGGV--LVYATCTLHPAENEGVISQFL 398
>gi|393201779|ref|YP_006463621.1| tRNA and rRNA cytosine-C5-methylase [Solibacillus silvestris
StLB046]
gi|406664656|ref|ZP_11072431.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
isronensis B3W22]
gi|327441110|dbj|BAK17475.1| tRNA and rRNA cytosine-C5-methylase [Solibacillus silvestris
StLB046]
gi|405387504|gb|EKB46928.1| Ribosomal RNA small subunit methyltransferase B [Bacillus
isronensis B3W22]
Length = 453
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 115/234 (49%), Gaps = 26/234 (11%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVNT K V+ + L ++ V ++ + +P+ L L G NG + +Q ++S
Sbjct: 187 VRVNTTKATVEQVLTTLEREGVKARRSEYIPECLHLESGQAARTGAF-RNGLITIQDESS 245
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ A L P+PG KVLD C+APG KT HLA +MK +G I+A +L+ +++ +++ + G
Sbjct: 246 MLPAKVLNPQPGMKVLDMCAAPGGKTTHLAEVMKNEGSILATDLHPKKLDLIEENVARLG 305
Query: 187 AANIEV--LHG----DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
IE L G FL + D AIL+D CSG G + D
Sbjct: 306 LNIIETAPLDGRKAAGFLQKEGYD-------AILVDAPCSGLGVMRRKPDIKYTKRE--- 355
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVL 293
E L L Q L +A+ + R+VYSTC++ + ENE +++ L
Sbjct: 356 -------EDLESLQTIQLSILNNAVQLLKQDGRLVYSTCTVDRSENEGTVQAFL 402
>gi|448630650|ref|ZP_21673230.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula vallismortis ATCC
29715]
gi|445755683|gb|EMA07066.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula vallismortis ATCC
29715]
Length = 303
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 114/250 (45%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
I+D A + P P VRVN++K V+ L + + D L +LP PG
Sbjct: 11 IDDFEAFTDACERPLPSAVRVNSIKATVERVRTALTEADIAYDPVDWHDGLFVLPEDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ +G + Q + S + A L P+PG +V DAC+APG+KT LAALM G++
Sbjct: 71 ANWP----YFHGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTTQLAALMDDTGEV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA + V H D N K L+D CS GT
Sbjct: 127 VATDNNLGRISALRTNTERLGATTVAVTHEDGRNHSLKPFGGEGYDRALVDVPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
+ D L + + + +S QK L+ A+ PG VVYSTC+
Sbjct: 187 RKNPDTL----------EDWTLSHVEGISGVQKGILKRAVEVTEPG-GTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE V+ VL
Sbjct: 236 ENEAVLDYVL 245
>gi|443323050|ref|ZP_21052061.1| ribosomal RNA small subunit methyltransferase RsmB [Gloeocapsa sp.
PCC 73106]
gi|442787231|gb|ELR96953.1| ribosomal RNA small subunit methyltransferase RsmB [Gloeocapsa sp.
PCC 73106]
Length = 451
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/234 (31%), Positives = 124/234 (52%), Gaps = 27/234 (11%)
Query: 68 VRVNTLKMDVDS-AVLELGKQFVVQKDDLVPD-LLILPPGCDLHVHPLIVNGCVFLQGKA 125
+RVN LK VD A + + + V K + VP L I P + P G +Q +
Sbjct: 185 LRVNILKTSVDKMATILIEQGLAVTKLETVPQGLRINGPRGSIQQLPGYDQGWWVVQDSS 244
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ +V L P+PG K++DAC+APG KT H+A LM G++ A + + +R++++++
Sbjct: 245 AQLVTHLLDPQPGEKIIDACAAPGGKTTHIAELMGDVGEVWAIDRSFKRLKKVQE----- 299
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEV----RAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
N++ L + ++L D + SE+ +L+D CSG+GT +R P T
Sbjct: 300 ---NLDRLQLNSISLHHLDSSTSELPQECDRVLVDAPCSGNGTLHKR-----PDLRWRQT 351
Query: 242 ADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
E + L A Q++ L A ++ PG ++VY+TC+++ ENED+I+S L
Sbjct: 352 P-----EEIPNLVALQRQILNQAATWVKPG-GKLVYATCTLNPPENEDIIQSFL 399
>gi|159476732|ref|XP_001696465.1| hypothetical protein CHLREDRAFT_38989 [Chlamydomonas reinhardtii]
gi|158282690|gb|EDP08442.1| predicted protein [Chlamydomonas reinhardtii]
Length = 360
Score = 97.8 bits (242), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 129/272 (47%), Gaps = 35/272 (12%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP----DLLI 101
S+ + + L + +VP+P +R NTLK ++ +A+++ G V D + P L++
Sbjct: 60 SVAEALELMEANEVPRPVTLRTNTLKTRRRELAAALIQRG----VSLDPIGPWSKVGLVV 115
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ P + G LQG +S M ALAP+P V+D +APG KT ++AALM+
Sbjct: 116 YETKVPIGATPEYMAGHYMLQGASSFMPVMALAPQPEETVVDMAAAPGGKTTYIAALMRN 175
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
G + A E+NK+R++ + + G N V + D L P+ V +LLD CSG
Sbjct: 176 TGTVFANEINKDRLKSITGNLTRLGVTNTVVCNYDGKEL-PQVLGQRSVDRVLLDAPCSG 234
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYS 276
+G ++ PS + + + + + QK+ L A+ VVYS
Sbjct: 235 TGVVSKD-----PSVKTSKS-----QQDIWRCGHLQKQLLLAAIDLVDANSTTGGYVVYS 284
Query: 277 TCSIHQVENEDVIK--------SVLPIAMSFG 300
TCS+ E+E V+ V+P + FG
Sbjct: 285 TCSVCVEEDEAVVNYALRKRNVKVVPTGLEFG 316
>gi|229140511|ref|ZP_04269066.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus
BDRD-ST26]
gi|228643072|gb|EEK99348.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus
BDRD-ST26]
Length = 360
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 77 LETAEKMCEVNMLPPVPT---ARVNVDKITVEGAIALLASEGIEAKRGDLSDDAIQIEKG 133
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 134 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 192
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 193 MSLDLHAHKVRLIKQQAERLGLGNVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 251
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 252 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 302
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 303 EQVIERFL 310
>gi|448540796|ref|ZP_21623717.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-646]
gi|448549099|ref|ZP_21627875.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-645]
gi|448555726|ref|ZP_21631655.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-644]
gi|445708949|gb|ELZ60784.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-646]
gi|445713788|gb|ELZ65563.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-645]
gi|445717249|gb|ELZ68967.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. ATCC BAA-644]
Length = 313
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFAACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG +V D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD---------PKDPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N KD ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPFGERTPEKDGSFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278
S GT + D L D M + ++ QK LR A+ VVYSTC
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVKSVAGIQKGILRRAVQVTKAGGTVVYSTC 239
Query: 279 SIHQVENEDVIKSVL 293
+ ENE V+ VL
Sbjct: 240 TFAPEENEAVLDFVL 254
>gi|402556013|ref|YP_006597284.1| 16S rRNA methyltransferase B [Bacillus cereus FRI-35]
gi|401797223|gb|AFQ11082.1| 16S rRNA methyltransferase B [Bacillus cereus FRI-35]
Length = 444
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIERG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLGNVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|229092908|ref|ZP_04224042.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus
Rock3-42]
gi|228690530|gb|EEL44313.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus
Rock3-42]
Length = 360
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 77 LETAEKMCEMNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKG 133
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G +LD+C+APG KT H+A +KG G++
Sbjct: 134 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQV 192
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 193 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 251
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 252 RRKPDIKLGK-------DKGDSERLSTIQFAILEKIAPLLKQGG--RLVYSTCTIEKIEN 302
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 303 EQVIERFL 310
>gi|189426656|ref|YP_001953833.1| sun protein [Geobacter lovleyi SZ]
gi|189422915|gb|ACD97313.1| sun protein [Geobacter lovleyi SZ]
Length = 464
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 75/231 (32%), Positives = 110/231 (47%), Gaps = 14/231 (6%)
Query: 65 PRYVRVNTLKMDVDSAVLEL--GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
P +RVNTL++ SA+LE + + P+ + L C + P G +Q
Sbjct: 193 PLTLRVNTLRIS-RSALLERFHAAELAAEPCRFAPEGIQLLQRCQITGLPGFDEGLFMVQ 251
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
+AS +VA LAP+ G ++LD C+APG K HLA LM +G I A +LN R+RR+ ++
Sbjct: 252 DEASQLVAHLLAPQTGEQILDMCAAPGGKATHLAQLMNDRGCITATDLNARRIRRICESA 311
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+ G +I+ + D L D + + ILLD CSG G + + +
Sbjct: 312 QRLGLTSIQAVAADALTSDYLEGL--QFDRILLDAPCSGLGV-------IRRNPEAKWRL 362
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
P E+ R A L GV +VY+TCS E+E VIK L
Sbjct: 363 TPAEISRCAARQHLLIDAAAARLKPAGV--LVYATCSTAMEEDETVIKDFL 411
>gi|427414320|ref|ZP_18904510.1| ribosomal RNA small subunit methyltransferase B [Veillonella ratti
ACS-216-V-Col6b]
gi|425714696|gb|EKU77699.1| ribosomal RNA small subunit methyltransferase B [Veillonella ratti
ACS-216-V-Col6b]
Length = 449
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/255 (31%), Positives = 128/255 (50%), Gaps = 30/255 (11%)
Query: 64 KPRYV-RVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVF 120
+PR R+NTLK V + L K ++ + +P+ + I L P++ G +
Sbjct: 183 RPRLTARINTLKTSVADGMSALEKAGWLAEATGKLPEAVHITHHTGSLESAPIVKAGLIT 242
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+AS VA + PKPG KVLD C+APG KT+HLAA M +G+IVA ++++ ++ ++
Sbjct: 243 FTDEASMAVAYVVDPKPGEKVLDCCAAPGGKTMHLAARMNNEGQIVADDIHEHKLGLME- 301
Query: 181 TIKLSGAANIEVLHGDF-LNLDPKDPA--YSEVRAILLDPSCSGSGTAAERLD---HLLP 234
+ A + V DF L K P Y++ +L+D CSG G +LD H P
Sbjct: 302 ----ANAKRLGVTIADFNLQDATKLPQTWYNQFDKVLVDAPCSGLGILQRKLDMRWHKTP 357
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSV 292
E L +L Q++ + A PG +VYSTC+I++ ENE V+++
Sbjct: 358 -------------ESLTELPKLQQQIIETAAKTVKPG-GVLVYSTCTINRAENEGVVEAF 403
Query: 293 LPIAMSFGFQLATPF 307
L +F + A+ F
Sbjct: 404 LKANDNFELEDASSF 418
>gi|389847107|ref|YP_006349346.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mediterranei ATCC
33500]
gi|448614944|ref|ZP_21663972.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mediterranei ATCC
33500]
gi|388244413|gb|AFK19359.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mediterranei ATCC
33500]
gi|445753031|gb|EMA04450.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mediterranei ATCC
33500]
Length = 313
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 122/256 (47%), Gaps = 24/256 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + P P VRVNT+K V+ A L + V + D P +L L
Sbjct: 11 VDDEEAFLAACERPLPSVVRVNTIKTTVERAREALDDEGVAYEPTDWHPGILKLEESSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG ++ D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERIWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD--------PKDP-AYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N P++P ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPFGERTPEEPGSFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYST 277
S GT + D L D M + ++ QK LR A+ PG VVYST
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVASVAGIQKGILRRAVQVTKPG-GSVVYST 238
Query: 278 CSIHQVENEDVIKSVL 293
C++ ENE V+ VL
Sbjct: 239 CTLAPEENEAVLDFVL 254
>gi|344204967|ref|YP_004790109.1| putative rRNA small subunit methyltransferase B [Mycoplasma
putrefaciens KS1]
gi|343956890|gb|AEM68605.1| putative rRNA small subunit methyltransferase B [Mycoplasma
putrefaciens KS1]
Length = 419
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 71/223 (31%), Positives = 116/223 (52%), Gaps = 16/223 (7%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
Y RVN+LK+ + + +F+++K +L D I + L NG + +Q KAS
Sbjct: 177 YFRVNSLKISANQFFAKYKDEFLLEKTNL-KDCFIANKA--IVNSSLYQNGLITIQDKAS 233
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+V+ L P VLD C+APG+KT HL+A+M G I+A E++K ++ + + I G
Sbjct: 234 ILVSQVLNPSLNANVLDMCAAPGSKTTHLSAIMNNTGMILANEISKNKLGLIAENISRLG 293
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
NI++ + D +D + Y + ILLD CSG G + + L D +
Sbjct: 294 CQNIKLANLDARQIDRTN--YFDF--ILLDAPCSGFGVLKRKPEIKL-------NFDFKQ 342
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
+++ KL A ++ H L G +VYSTC+I++ EN++ I
Sbjct: 343 IKQTVKLQAELLESAYHNLKSNG--ELVYSTCTINKNENQNQI 383
>gi|427736995|ref|YP_007056539.1| ribosomal RNA small subunit methyltransferase RsmB [Rivularia sp.
PCC 7116]
gi|427372036|gb|AFY55992.1| ribosomal RNA small subunit methyltransferase RsmB [Rivularia sp.
PCC 7116]
Length = 459
Score = 97.8 bits (242), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 123/253 (48%), Gaps = 26/253 (10%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDL-----LILPPGCDLHV 110
+ QTP++ +RVN L ++ L Q + + +P+L L+ PG ++
Sbjct: 187 MNQTPNID----LRVNQLCSSIEEVETALKNQGISSQR--IPNLPQALRLLNSPGAIKNL 240
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
P G +Q ++ +V+ L P+P ++DAC+APG KT H+A LM G+I AC+
Sbjct: 241 -PGFNEGWWTVQDSSAQLVSYLLNPQPHEVIIDACAAPGGKTTHIAELMGDTGQIYACDR 299
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+ R+R+L+ + ++EV GD +L + + +V LLD CSG GT
Sbjct: 300 TESRLRKLQQNTQRLNLKSVEVCLGDSRSLTQFEKSADKV---LLDVPCSGLGT------ 350
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF-PGVERVVYSTCSIHQVENEDVI 289
L HA + + +L Q + L H+ +F +VYSTC++H ENE I
Sbjct: 351 --LHRHADARWRQTP--DNIKELCVLQAELLLHSSTFVKDSGSLVYSTCTLHPDENEGAI 406
Query: 290 KSVLPIAMSFGFQ 302
KS L ++ Q
Sbjct: 407 KSFLESNSNWEIQ 419
>gi|284161369|ref|YP_003399992.1| RNA methylase [Archaeoglobus profundus DSM 5631]
gi|284011366|gb|ADB57319.1| RNA methylase, NOL1/NOP2/sun family [Archaeoglobus profundus DSM
5631]
Length = 445
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 69/236 (29%), Positives = 119/236 (50%), Gaps = 29/236 (12%)
Query: 68 VRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+RVNTLK V + L GK+ +V +VP +L D L G +Q +
Sbjct: 184 IRVNTLKATVKEVIDHLRRQGKEVIVS--SVVPTVLKFEGPYDFDKSKLYRKGKFVVQEE 241
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS++ + L PKP V+D C+APG KT+H+A LM+ +G I A ++++ R++R+++ IK
Sbjct: 242 ASALASILLDPKPNETVVDLCAAPGGKTIHMAELMRNRGVIHAFDVDELRLKRMEELIKR 301
Query: 185 SGAANIEVLHGDFLN-LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
G +++ D +D + ++ ++LD C+ GT + +
Sbjct: 302 CGVKIVKIYKMDARKAVDVLGESIAD--KVMLDAPCTSDGTLMK---------------N 344
Query: 244 PTEMERLNKLSAFQKKALRHALSFPGVE------RVVYSTCSIHQVENEDVIKSVL 293
P R+ + + L++ L G++ R++Y TCSI + ENEDV++ VL
Sbjct: 345 PELRWRIREEKIEEIAQLQYELLNTGIDLLKPKGRILYCTCSIFREENEDVVERVL 400
>gi|311068095|ref|YP_003973018.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus atrophaeus
1942]
gi|310868612|gb|ADP32087.1| RNA-binding Sun protein; 16S rRNA m5C967 methyltransferase,
S-adenosyl-L-methionine-dependent [Bacillus atrophaeus
1942]
Length = 447
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
VP + +RVN +K D D + L + + +K DL PD + L G + NG V
Sbjct: 176 VPPKQTLRVNQMKTDRDELLESLAAEGIEAEKGDLSPDAVKLLKGS-IAGSRFFKNGDVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL P+ G +LDAC+APG K+ H+A M +G +++ +L++ +V+ +K+
Sbjct: 235 IQDESSMLVARALGPEAGETILDACAAPGGKSTHIAERMGNEGSVLSLDLHEHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYS--EVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++ + ++ A+ E IL+D CSG G + D
Sbjct: 295 AANRLG---LTIIKPEAMDARKASEAFQDDEFDRILVDAPCSGFGVIRRKPDM------- 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
++ +P + RL K+ Q LR P V++ +VYSTC++ + ENE+VI + +
Sbjct: 345 KYSKNPEDSARLAKI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENEEVIHAFI 397
>gi|448678053|ref|ZP_21689243.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula argentinensis DSM
12282]
gi|445773728|gb|EMA24761.1| tRNA and rRNA cytosine-C5-methylase [Haloarcula argentinensis DSM
12282]
Length = 303
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 114/250 (45%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
I+D A + P P VRVNT+K V+ L + D L +LP PG
Sbjct: 11 IDDFEAFIDACERPLPSAVRVNTIKATVERVRTALADADIAYDPVDWHDGLFVLPEDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ P +G + Q + S + A L P+PG +V DAC+APG+KT LAA M+ G++
Sbjct: 71 ANW---PYF-HGWIHGQEEVSVIPATVLDPQPGERVWDACAAPGSKTTQLAARMEDAGEV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA + V H D N K L+D CS GT
Sbjct: 127 VATDNNLGRISALRTNTERLGATTVAVTHEDGRNHSLKPFGGEGYDRALVDVPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
+ D L + + + +S QK L+ A+ PG VVYSTC+
Sbjct: 187 RKNPDTL----------EDWSLSHVEGISGVQKGILKRAVEVTEPG-GTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE V+ VL
Sbjct: 236 ENEAVLDYVL 245
>gi|419823924|ref|ZP_14347457.1| 16S rRNA methyltransferase B [Bacillus atrophaeus C89]
gi|388471961|gb|EIM08751.1| 16S rRNA methyltransferase B [Bacillus atrophaeus C89]
Length = 447
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 124/238 (52%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
VP + +RVN +K D D + L + + +K DL PD + L G + NG V
Sbjct: 176 VPPKQTLRVNQMKTDRDELLESLAAEGIEAEKGDLSPDAVKLLKGS-IAGSRFFKNGDVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL P+ G +LDAC+APG K+ H+A M +G +++ +L++ +V+ +K+
Sbjct: 235 IQDESSMLVARALGPEAGETILDACAAPGGKSTHIAERMGNEGSVLSLDLHEHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYS--EVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
G + ++ + ++ A+ E IL+D CSG G + D
Sbjct: 295 AANRLG---LTIIKPEAMDARKASEAFQDDEFDRILVDAPCSGFGVIRRKPDM------- 344
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
++ +P + RL K+ Q LR P V++ +VYSTC++ + ENE+VI + +
Sbjct: 345 KYSKNPEDSARLAKI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENEEVIHAFI 397
>gi|409095647|ref|ZP_11215671.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus zilligii AN1]
Length = 309
Score = 97.4 bits (241), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 119/248 (47%), Gaps = 20/248 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E +A+ + + P PR RVNTL+++V L K+ F ++ + L +
Sbjct: 24 ERALAIAEAMEKPLPRCFRVNTLRIEVPKLTKLLNKKGFQFKRVPWAREGFCLTREPFAV 83
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P ++G +++Q +S AL PKPG V D +APG KT +LA LM+ KG I A
Sbjct: 84 TSTPEYLSGLLYIQEASSMYPPVALEPKPGETVADMAAAPGGKTSYLAQLMENKGIIYAF 143
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ ++R++ + + G N + H L+++ E ILLD C+GSGT
Sbjct: 144 DVGEDRLKETRLNLSRLGVTNTVLFHSSSLHIEELG---VEFDKILLDAPCTGSGTI--- 197
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVEN 285
H P + T ME + Q K L LS G+ +VYSTCS+ EN
Sbjct: 198 --HKNPERKANRT-----MEDVKFCQGLQMKLLEKGLSVLKRGGI--LVYSTCSLEPEEN 248
Query: 286 EDVIKSVL 293
E VI+ VL
Sbjct: 249 EFVIQWVL 256
>gi|429505125|ref|YP_007186309.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429486715|gb|AFZ90639.1| 16S rRNA methyltransferase B [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 447
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 26/240 (10%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D ++ + E+ + DL PD + L G + NG V
Sbjct: 176 IPPKQTLRVNHIKSDRETVLNEMENAGLEAEAGDLSPDAIKLLKGSIANT-AFFQNGGVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LM+ +G + + +L++ +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY----SEVRAILLDPSCSGSGTAAERLDHLLPSH 236
GA + + D +D + +L+D CSG G + D
Sbjct: 295 -----GAERLGLTIIDAQTMDARKAGEVFGAERFDRVLVDAPCSGFGVIRRKPDM----- 344
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + R LS Q LR P V++ +VYSTC++ + ENE+V+ + +
Sbjct: 345 --KYTKTPEDSRR---LSEIQLGILREIA--PLVKKGGTLVYSTCTMDRTENEEVMHAFI 397
>gi|403069237|ref|ZP_10910569.1| hypothetical protein ONdio_06550 [Oceanobacillus sp. Ndiop]
Length = 451
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 83/244 (34%), Positives = 124/244 (50%), Gaps = 20/244 (8%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+RV LK+ + A+ L +Q F V+K P +I+ G L+ L G V +Q ++S
Sbjct: 184 IRVQPLKITREKAMQVLREQGFEVRKSIFSPQGIIVDKGNILNTM-LFKEGYVTIQDQSS 242
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA L P+PG VLD CSAPG K H+A M+ +G I A +L+K++V+ + D L
Sbjct: 243 MLVAEMLDPQPGMHVLDGCSAPGGKVTHIAEKMENEGVIHAYDLHKKKVKLIDDKAALLH 302
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
+ I+ GD L+ S R IL+D CSG G + + D E
Sbjct: 303 LSIIDAKPGDARKLEDMHERESFDR-ILIDAPCSGLGVIRGKPE---------IKYDKRE 352
Query: 247 MERLNKLSAFQKKALRHA---LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQL 303
E +++LS Q + L A L G+ ++YSTC++ ENE+VIK L + GFQ+
Sbjct: 353 -EDIHRLSEIQTEILESAAPLLKKDGL--LIYSTCTVDAEENENVIKQFL--LNNTGFQI 407
Query: 304 ATPF 307
F
Sbjct: 408 DPSF 411
>gi|52141623|ref|YP_085206.1| sun protein [Bacillus cereus E33L]
gi|51975092|gb|AAU16642.1| sun protein [Bacillus cereus E33L]
Length = 444
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQFAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|228987008|ref|ZP_04147134.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
gi|229157441|ref|ZP_04285519.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus ATCC
4342]
gi|228626168|gb|EEK82917.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus ATCC
4342]
gi|228772786|gb|EEM21226.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar tochigiensis BGSC 4Y1]
Length = 360
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 77 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAIALLASEGIEAKRGDLSDDAIQIEKG 133
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 134 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 192
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 193 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 251
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 252 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 302
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 303 EQVIERFL 310
>gi|251797738|ref|YP_003012469.1| sun protein [Paenibacillus sp. JDR-2]
gi|247545364|gb|ACT02383.1| sun protein [Paenibacillus sp. JDR-2]
Length = 491
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 85/282 (30%), Positives = 136/282 (48%), Gaps = 19/282 (6%)
Query: 33 AIQLALAQLLVRNKVKSI--EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV- 89
+++ + + LV VK+ E A+ + + P VRVN L+ + + L +Q
Sbjct: 183 SVRYSYPEWLVERWVKAYGAETAEAICASGNEPPHASVRVNPLRSSRNEVLSLLTEQGGD 242
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
+ L P +++ G +L +G +Q ++S +VA +APK G +VLD C+APG
Sbjct: 243 AEASRLAPAGIVVRRGGNLADTEGFRDGLWTMQDESSMLVAEVVAPKAGMQVLDCCAAPG 302
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
KT H+A LM GKGK+ A +L+ + + + D G NIE + D L + A +
Sbjct: 303 GKTTHMAELMSGKGKVYANDLHPHKRQLIVDQAVRLGLQNIEAITEDAGKLGERF-APAS 361
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR--HALSF 267
+ A+LLD CSG G R + + +G A+ ++A Q++ L L
Sbjct: 362 IDAVLLDAPCSGFGV-IRRKPEIKWTKTAGDVAE---------IAAIQRRLLGAVAGLVK 411
Query: 268 PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN 309
PG +VYSTC+I ENE+ + L FQL +P
Sbjct: 412 PGGT-LVYSTCTIESTENEEQVAVFLKEHPE--FQLDAEWPE 450
>gi|332159596|ref|YP_004424875.1| proliferating-cell nucleolar protein p120 [Pyrococcus sp. NA2]
gi|331035059|gb|AEC52871.1| proliferating-cell nucleolar protein p120 [Pyrococcus sp. NA2]
Length = 309
Score = 97.4 bits (241), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 116/247 (46%), Gaps = 18/247 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E + + + + P PR RVNTLK+ + L K+ F ++ + L +
Sbjct: 24 ERALRIAEAMEKPLPRCFRVNTLKISIQELTKRLNKKGFQFKRVPWAREGFCLTREPFSI 83
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P + G +++Q +S AL PKP V D +APG KT +LA LM+ KG I A
Sbjct: 84 TSTPEFLTGLIYIQEASSMYPPVALDPKPNEIVADMAAAPGGKTSYLAQLMENKGIIYAF 143
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+++++R+R + + G N+ + H L++D E ILLD C+GSGT
Sbjct: 144 DVDEDRLRETRLNLSRLGVLNVVLFHSSSLHIDELG---VEFDKILLDAPCTGSGTI--- 197
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENE 286
H P T +E + Q K + AL PG +VYSTCS+ ENE
Sbjct: 198 --HKNPERKWNRT-----IEDIKFCQGLQMKMIEKALEVLKPG-GILVYSTCSLEPEENE 249
Query: 287 DVIKSVL 293
VI+ VL
Sbjct: 250 FVIQWVL 256
>gi|47569491|ref|ZP_00240171.1| sun protein [Bacillus cereus G9241]
gi|47553820|gb|EAL12191.1| sun protein [Bacillus cereus G9241]
Length = 444
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAIALLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G VLD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|313893390|ref|ZP_07826962.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
oral taxon 158 str. F0412]
gi|313442031|gb|EFR60451.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
oral taxon 158 str. F0412]
Length = 451
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 68/242 (28%), Positives = 122/242 (50%), Gaps = 20/242 (8%)
Query: 64 KPRYV-RVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPP-GCDLHVHPLIVNGCVF 120
+PR R+NT+K+ +D + EL + V++D +P+++ + L ++ G +
Sbjct: 185 QPRLTARINTVKVSIDDCIKELQNLGWTVEQDKDIPEVVYINSHQGHLEKAKPVIEGHIT 244
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
KAS +VA + P+PG ++LD C+APG K++H+A+LM G I++C++ ++ +
Sbjct: 245 FMDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLDLMNQ 304
Query: 181 TIKLSGAA--NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ G + + ++ G +L D + +L+D CSG G ++LD
Sbjct: 305 NAERLGVSIVSTKLQDGRYL----PDNWKEQFDRVLVDAPCSGLGILQKKLDMRWRKSE- 359
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVLPIAM 297
+ LN+L Q + L A V +VYSTC+I+ ENEDV++ L
Sbjct: 360 ---------DLLNELPPLQLEILEKASEMVKVNGYLVYSTCTINSGENEDVLEKFLATHK 410
Query: 298 SF 299
+F
Sbjct: 411 NF 412
>gi|220931836|ref|YP_002508744.1| sun protein [Halothermothrix orenii H 168]
gi|219993146|gb|ACL69749.1| sun protein [Halothermothrix orenii H 168]
Length = 440
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 122/249 (48%), Gaps = 23/249 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQ-KDDLVPDLLILPPGCDL 108
+D L Q + P VR N L++D LE+ K++ ++ + VPD ++ +
Sbjct: 163 FKDTERLCQYLNDSPPVTVRYNRLQVD-QKRFLEVFKKYNIEVESTTVPDCYVVNNFNTI 221
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
PL +G +QG A+++ L P PG +VLD + PG KT HLA LM +G+I+A
Sbjct: 222 KDLPLFKDGGFIVQGPAATLAGFVLGPDPGNRVLDMSAGPGGKTTHLAELMNNRGEIIAL 281
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE-VRAILLDPSCSGSGTAAE 227
++ + +++ +++ G ++ + +D +D E +L+D C+G G A
Sbjct: 282 DIYEHKLKLIEENCNRLGVNIVKTIK-----VDGRDYTSQEKFDMVLVDAPCTGLGLVAH 336
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVE 284
+ P T + + KL QK L +ALS G V+YSTC++ + E
Sbjct: 337 K-----PEIKWNRTENDVK-----KLQEIQKSLLHNALSLVRDGGF--VLYSTCTLTRAE 384
Query: 285 NEDVIKSVL 293
NE+V+ VL
Sbjct: 385 NEEVVNQVL 393
>gi|448570932|ref|ZP_21639443.1| tRNA and rRNA cytosine-C5-methylase [Haloferax lucentense DSM
14919]
gi|445722850|gb|ELZ74501.1| tRNA and rRNA cytosine-C5-methylase [Haloferax lucentense DSM
14919]
Length = 313
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFAACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG +V D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---------DPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K D ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPYGERTPERDASFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278
S GT + D L D M + ++ QK LR A+ VVYSTC
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVKSVAGIQKGILRRAVQVTKAGGTVVYSTC 239
Query: 279 SIHQVENEDVIKSVL 293
+ ENE V+ VL
Sbjct: 240 TFAPEENEAVLDFVL 254
>gi|390960428|ref|YP_006424262.1| hypothetical protein CL1_0256 [Thermococcus sp. CL1]
gi|390518736|gb|AFL94468.1| hypothetical protein CL1_0256 [Thermococcus sp. CL1]
Length = 309
Score = 97.4 bits (241), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E +A+ + + P PR RVNTL+++V L K+ F ++ + L +
Sbjct: 24 ERALAIAEAMERPLPRCFRVNTLRIEVPRLTKLLNKKGFQFRRVPWAREGFCLTREPFSI 83
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P ++G +++Q +S AL P PG V D +APG KT H+A LM+ +G I A
Sbjct: 84 TSTPEYLSGLLYIQEASSMYPPVALEPGPGETVADMAAAPGGKTSHMAQLMENRGIIYAF 143
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ +ER++ + + G N + H L++D + + ILLD C+GSGT
Sbjct: 144 DVGEERLKETRLNLSRLGVTNAVLFHKSSLHIDELGVEFDK---ILLDAPCTGSGTI--- 197
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVEN 285
H P + T D + Q K + AL GV +VYSTCS+ EN
Sbjct: 198 --HKNPERKANRTMDDVKF-----CQGLQMKLIEKALEVLKRGGV--LVYSTCSLEPEEN 248
Query: 286 EDVIKSVL 293
E VI+ VL
Sbjct: 249 EFVIQWVL 256
>gi|452963159|gb|EME68241.1| tRNA and rRNA cytosine-C5-methylase [Magnetospirillum sp. SO-1]
Length = 440
Score = 97.1 bits (240), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 76/237 (32%), Positives = 120/237 (50%), Gaps = 24/237 (10%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVH-PLIV-----NGC 118
P +RVNTLK + AV L K+ + + + P G L+ PL+ NG
Sbjct: 168 PLDLRVNTLKATREEAVRALAKEGIKAEP-----TALSPLGLRLYARVPLVQVQAWRNGL 222
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+ +Q + S +VA PKPG V+D C+ G KT+ LAA M+ KG++VAC++ + RV R
Sbjct: 223 IEVQDEGSQLVALLTDPKPGQAVVDYCAGAGGKTLALAAAMQNKGRLVACDVAEWRVDRA 282
Query: 179 KDTIKLSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
+D ++ +G N+ V+ G+ + + +L+D C+G+GT D
Sbjct: 283 QDRLRRAGVHNVTRRVIEGESDKWIKR--SAGSFDRVLVDAPCTGTGTWRRNPD------ 334
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
A + E + + A A R L+ PG R+VY+TCSI + ENE+ I++ L
Sbjct: 335 AKWQLGETDLQELVVRQGAILDSAAR--LTKPG-GRLVYATCSIMREENEERIEAFL 388
>gi|334704160|ref|ZP_08520026.1| tRNA and rRNA cytosine-C5-methylase [Aeromonas caviae Ae398]
Length = 403
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/242 (33%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVF 120
+PK RY+RVNTLK D L K+ V D V L + L +GC
Sbjct: 150 MPK-RYLRVNTLKCTRDELQAMLAKEHVTTVPVDGVETALQVTSDAALFRTQAFADGCFE 208
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S +VAAAL KPG +V+DAC+ G KT+HLAA+M+GKG+++A ++ + ++ LK
Sbjct: 209 QQDAGSQLVAAALDVKPGMRVIDACAGAGGKTLHLAAMMQGKGRLLAMDVEEWKLENLKQ 268
Query: 181 TIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA N+E V+ K+ A +LLD CSG G D A
Sbjct: 269 RARRAGAHNVETRVITSSKTVKRLKESADR----VLLDVPCSGLGVLKRNPDAKWRDTA- 323
Query: 239 GHTADPTEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
ERL L A Q++ L R++ +VY+TCSI EN + L
Sbjct: 324 ---------ERLPVLVALQEEILQRYSQMVKVGGLLVYATCSILPEENRQQVDKFLAANE 374
Query: 298 SF 299
F
Sbjct: 375 HF 376
>gi|20093735|ref|NP_613582.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19886632|gb|AAM01512.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 449
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 92/305 (30%), Positives = 147/305 (48%), Gaps = 46/305 (15%)
Query: 15 HPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
HP W V EKF GA LL +++K +LM ++ P P+ RVNT
Sbjct: 143 HPRWFV---EKF-----GA-------LLDEDELK---ELMEVHNEP--PEYYTFRVNTTA 182
Query: 75 MDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIV--NGCVFLQGKASSMVAA 131
DV+ + E + F V++ + V + + G L + L G + Q +A+++V
Sbjct: 183 ADVEDVLREFEEHGFEVERGEYVDYCIRVKKGQPLRLEELECWREGHIVPQDEAAALVTE 242
Query: 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE 191
L P+PG ++ D C+APG KT H+A L + + +I+A ++++ R+RRL+ + NIE
Sbjct: 243 ILNPQPGERIADLCAAPGGKTTHIAQLTEDEAEILAVDVSRVRLRRLERFAERMVFENIE 302
Query: 192 VLHGDFLNLDPKDPAY-SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
VL D L ++P Y + +LLDP CS GT L P + +
Sbjct: 303 VLRADVRRLG-RNPRYVGKFDRVLLDPPCSSLGT-------LRSDPDVKWKIGPRD---I 351
Query: 251 NKLSAFQKKALRHA---LSFPGVERVVYSTCSIHQVENEDVIKSVL------PIAMSFGF 301
+L+ Q++ +R A L GV +VYSTC+I ENE V+ + P+ + F
Sbjct: 352 RELALKQRQLIRAAARLLKPGGV--LVYSTCTITPEENELVVSEAIKRDRLRPVDVRSEF 409
Query: 302 QLATP 306
+ P
Sbjct: 410 EFLHP 414
>gi|303388173|ref|XP_003072321.1| NOL1/NOL2/sun tRNA/rRNA cytosine-C5-methylase [Encephalitozoon
intestinalis ATCC 50506]
gi|303301460|gb|ADM10961.1| NOL1/NOL2/sun tRNA/rRNA cytosine-C5-methylase [Encephalitozoon
intestinalis ATCC 50506]
Length = 306
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 119/236 (50%), Gaps = 24/236 (10%)
Query: 64 KPRYVRVNTL-KMDVDSAVLELGKQFVVQKDDLV---PDLLILPPGCDLHVHPLIVNGCV 119
+P +R+NTL K D + L G+ V DDL +I + P + G
Sbjct: 32 RPTTIRINTLLKRRKDVSKLLRGRG--VDIDDLSWTDSGCVIFKSSVPIGATPEYLAGYY 89
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
LQG AS + + K G V+D C+APG KT H+AALM+ G I A ++N+ER+ LK
Sbjct: 90 CLQGAASMLPVLNMELKEGLTVVDLCAAPGGKTTHIAALMENTGTIYANDMNEERIAGLK 149
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
++ G N + +N+D + +V +L+D CSG+G ++ PS +
Sbjct: 150 SNVQRMGVKNCII-----MNMDGRKVNVGKVDRVLVDAPCSGTGVISKD-----PSVKTN 199
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
T +E++R+ L QK+ + H PG ++YSTCS+ ENE+V+ +L
Sbjct: 200 RTR--SEIDRMVTL---QKELILHGFEMLRPG-GILMYSTCSVLVKENEEVVNYLL 249
>gi|124027398|ref|YP_001012718.1| tRNA and rRNA cytosine-C5-methylase [Hyperthermus butylicus DSM
5456]
gi|123978092|gb|ABM80373.1| tRNA and rRNA cytosine-C5-methylase [Hyperthermus butylicus DSM
5456]
Length = 472
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/231 (31%), Positives = 112/231 (48%), Gaps = 19/231 (8%)
Query: 68 VRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
+RVNTLK V+ V EL GK +V VP ++ D L G +Q +
Sbjct: 208 IRVNTLKTTVEEVVEELKREGKNPIVSTR--VPVIVKFEGPYDFDRSRLYREGKFVIQEE 265
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS+ + L PKPG V+D +APG KT H+A LMK G+I A ++++ R++R++ ++
Sbjct: 266 ASAAASIILDPKPGMTVVDLAAAPGGKTSHIAELMKNHGRIYAFDIDRVRIKRMRMILRR 325
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
G + + D P+ +LLD C+ +GT A+ + G
Sbjct: 326 MGITIVRIFEKDARE-APRILGEEIADRVLLDAPCTSTGTIAKNPELRWRVREEG----- 379
Query: 245 TEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L ++ Q++ L A L PG R++Y+TCS+ ENED IK L
Sbjct: 380 -----LEEIVKLQREMLEAAAKLVKPG-GRLLYTTCSLLPEENEDNIKWFL 424
>gi|394993912|ref|ZP_10386651.1| 16S rRNA methyltransferase B [Bacillus sp. 916]
gi|393805236|gb|EJD66616.1| 16S rRNA methyltransferase B [Bacillus sp. 916]
Length = 447
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 121/240 (50%), Gaps = 26/240 (10%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D ++ + E+ + DL PD + L G + NG V
Sbjct: 176 IPPKQTLRVNHIKSDRETVLNEMENAGLEAEAGDLSPDAIKLLKGSIANT-AFFQNGRVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+A LM+ +G + + +L++ +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIAELMENEGSLTSLDLHRHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY----SEVRAILLDPSCSGSGTAAERLDHLLPSH 236
GA + + D +D + +L+D CSG G + D
Sbjct: 295 -----GAERLGLTIIDAQTMDARKAGEVFGAERFDRVLVDAPCSGFGVIRRKPDM----- 344
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + R LS Q LR P V++ +VYSTC++ + ENE+V+ + +
Sbjct: 345 --KYTKTPEDSRR---LSEIQLGILREIA--PLVKKGGTLVYSTCTMDRTENEEVMHAFI 397
>gi|374324700|ref|YP_005077829.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
terrae HPL-003]
gi|357203709|gb|AET61606.1| ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Paenibacillus
terrae HPL-003]
Length = 471
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 135/282 (47%), Gaps = 13/282 (4%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLE-LGKQFV 89
A++ + Q LV+ +K ++ A+ + + P VRVNT D ++E L K
Sbjct: 168 ALEHSHPQWLVKRWIKQYGVDIAEAICRANNEPPAVSVRVNTTMTTRDQLLIEMLAKGMD 227
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
+ P +++ G ++ + +G + +Q ++S +VA A+AP+P VLD C+APG
Sbjct: 228 AVPSAVSPYGIVVRSGGNMALTTWYTDGLLSVQDESSMLVAEAVAPEPDMLVLDCCAAPG 287
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
KT H+A LMK +G+I+A +L+ + R +++ G +E + GD L L + S
Sbjct: 288 GKTAHMAELMKDQGRIIANDLHAHKHRLIQEQADRLGLDAVETVTGDALELKNRYAPASF 347
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269
R +LLD CSG G + D + P ++ + +L ++ L G
Sbjct: 348 DR-VLLDAPCSGFGVIRRKPDLRW-------SKTPQDVRDITQLQHELLDSVAELLKPGG 399
Query: 270 VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGT 311
+ +VYSTC+I ENE I L + FP+ T
Sbjct: 400 I--LVYSTCTIEPDENEGQITRFLGEHPEYELAEGHSFPDVT 439
>gi|258515525|ref|YP_003191747.1| sun protein [Desulfotomaculum acetoxidans DSM 771]
gi|257779230|gb|ACV63124.1| sun protein [Desulfotomaculum acetoxidans DSM 771]
Length = 452
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 124/253 (49%), Gaps = 18/253 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ--FVVQKDDLVPDLLILPPGCDL 108
E + + Q+ + P +R NTL+++ D+ + EL KQ +V K P+ L + L
Sbjct: 168 EKTIRICQSNNTPARFSIRTNTLQINRDN-LAELLKQQGMIVDKTGFAPEGLNVEGFTSL 226
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P NG +Q ++S + A+ P +V+DAC+APG KT HLA LM+ KG+I+A
Sbjct: 227 RNFPAFRNGLFQVQDESSILAGHAVKPAVNCRVIDACAAPGGKTTHLAQLMENKGEIIAA 286
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ ++ ++D + G +++++ D L +++ +L+D CSG G R
Sbjct: 287 DIYPHKLDLIEDNCQRLGIKCVKIINLDSRTLHNSYTGWADY--VLVDAPCSGLGVLRRR 344
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENE 286
D E E++ L Q++ L A PG +VYSTC+I + EN
Sbjct: 345 PDARWRK----------EAEQIPALVKIQREILESAALCVRPG-GVLVYSTCTITEEENI 393
Query: 287 DVIKSVLPIAMSF 299
+ +K L + F
Sbjct: 394 EQVKYFLLTHLDF 406
>gi|319937497|ref|ZP_08011902.1| SUN protein [Coprobacillus sp. 29_1]
gi|319807337|gb|EFW03946.1| SUN protein [Coprobacillus sp. 29_1]
Length = 416
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 88/293 (30%), Positives = 135/293 (46%), Gaps = 41/293 (13%)
Query: 2 EEARRIGLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPD 61
+E R+ + T+ HPLW V ++ + E Y +
Sbjct: 132 DEKERLSIETS--HPLWLVK--------------------MLSKQYGEEETRKICYADNE 169
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
VP + RVNTLK +S L K + + L PD L G ++ G V +
Sbjct: 170 VPY-KSARVNTLKTKKES----LLKDDMWSEGQLSPDCLYYQRG-NIANTKYYQEGLVTI 223
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q ++S MVA L P+P +LD C APG KT HLAALMK +G+I A +L + ++ +K+
Sbjct: 224 QDESSQMVARLLNPQPHEYILDMCCAPGGKTSHLAALMKNQGRIDAYDLYEHKIPLVKEQ 283
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
++ G + V D +L PA + R ILLD CSG G A + H
Sbjct: 284 MQRLGVDIVHVQAYDSTHLIELYPADTFDR-ILLDAPCSGLGVLARK------PEIKYHD 336
Query: 242 ADPTEMERLNKLSAFQKKALRHA-LSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+D ++++ Q+K L +A R+VYSTC+I++ EN I++ +
Sbjct: 337 SDS-----MDEIIQIQQKLLENAYFLLKNGGRIVYSTCTINKKENGKQIETFI 384
>gi|196038686|ref|ZP_03105994.1| sun protein [Bacillus cereus NVH0597-99]
gi|196030409|gb|EDX69008.1| sun protein [Bacillus cereus NVH0597-99]
Length = 444
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G +LD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSMIQFAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|226313315|ref|YP_002773209.1| ribosomal RNA small subunit methyltransferase [Brevibacillus brevis
NBRC 100599]
gi|226096263|dbj|BAH44705.1| probable ribosomal RNA small subunit methyltransferase
[Brevibacillus brevis NBRC 100599]
Length = 448
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 136/284 (47%), Gaps = 19/284 (6%)
Query: 33 AIQLALA----QLLVRN--KVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK 86
A+Q+A+A + LVR V E +A+ + + +RVN K D + +L +
Sbjct: 141 ALQIAVAYSHPEWLVRQWLNVYGEETTIAICEANNRTPHSAIRVNAWKTTKDQVLDKLAE 200
Query: 87 QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACS 146
+ + + V IL G + L G +Q ++S +VA ALA +PG +VLDAC+
Sbjct: 201 EGLEGQASSVSPHAILMEGGHVAGSRLFKEGYFTIQDESSMLVAPALAAQPGMRVLDACA 260
Query: 147 APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 206
APG KT H+A +M+ +G+I+A +++ + + + K G I+ + D L+L K A
Sbjct: 261 APGGKTTHIAEMMENRGEIIASDVHPHKRDLIANAAKRLGITIIQPIVSDALDLPEK--A 318
Query: 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
ILLD C+G G + D P ++ + +L K L L+
Sbjct: 319 LGTFDRILLDAPCTGFGVIRRKPD-------LKWNKTPEDVRAIAQLQYELLKTLAPLLA 371
Query: 267 FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ--LATPFP 308
GV +VYSTC+I EN+++++ + F F LA P
Sbjct: 372 EGGV--MVYSTCTIEPAENQEIVRRFVEEHPDFVFDDTLAQDLP 413
>gi|254735904|ref|ZP_05193610.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Western North America USA6153]
Length = 444
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G +LD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSMIQFAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|30263868|ref|NP_846245.1| sun protein [Bacillus anthracis str. Ames]
gi|47529294|ref|YP_020643.1| sun protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49186715|ref|YP_029967.1| sun protein [Bacillus anthracis str. Sterne]
gi|49478421|ref|YP_037926.1| sun protein [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|118479087|ref|YP_896238.1| sun protein [Bacillus thuringiensis str. Al Hakam]
gi|165872297|ref|ZP_02216934.1| sun protein [Bacillus anthracis str. A0488]
gi|167636414|ref|ZP_02394713.1| sun protein [Bacillus anthracis str. A0442]
gi|167641141|ref|ZP_02399396.1| sun protein [Bacillus anthracis str. A0193]
gi|170688847|ref|ZP_02880050.1| sun protein [Bacillus anthracis str. A0465]
gi|170708813|ref|ZP_02899249.1| sun protein [Bacillus anthracis str. A0389]
gi|177654922|ref|ZP_02936639.1| sun protein [Bacillus anthracis str. A0174]
gi|190565749|ref|ZP_03018668.1| sun protein [Bacillus anthracis str. Tsiankovskii-I]
gi|196035830|ref|ZP_03103232.1| sun protein [Bacillus cereus W]
gi|196047441|ref|ZP_03114653.1| sun protein [Bacillus cereus 03BB108]
gi|218904995|ref|YP_002452829.1| sun protein [Bacillus cereus AH820]
gi|227813227|ref|YP_002813236.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. CDC 684]
gi|229603771|ref|YP_002868102.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. A0248]
gi|254683426|ref|ZP_05147286.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. CNEVA-9066]
gi|254721397|ref|ZP_05183186.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. A1055]
gi|254739848|ref|ZP_05197541.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Kruger B]
gi|254751038|ref|ZP_05203077.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Vollum]
gi|254756703|ref|ZP_05208732.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Australia 94]
gi|301055356|ref|YP_003793567.1| sun protein [Bacillus cereus biovar anthracis str. CI]
gi|376267761|ref|YP_005120473.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
F837/76]
gi|386737687|ref|YP_006210868.1| Sun protein [Bacillus anthracis str. H9401]
gi|421507405|ref|ZP_15954325.1| 16S rRNA methyltransferase B [Bacillus anthracis str. UR-1]
gi|421639620|ref|ZP_16080211.1| 16S rRNA methyltransferase B [Bacillus anthracis str. BF1]
gi|423550386|ref|ZP_17526713.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
ISP3191]
gi|30258512|gb|AAP27731.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. Ames]
gi|47504442|gb|AAT33118.1| sun protein [Bacillus anthracis str. 'Ames Ancestor']
gi|49180642|gb|AAT56018.1| sun protein [Bacillus anthracis str. Sterne]
gi|49329977|gb|AAT60623.1| sun protein [Bacillus thuringiensis serovar konkukian str. 97-27]
gi|118418312|gb|ABK86731.1| sun protein [Bacillus thuringiensis str. Al Hakam]
gi|164711973|gb|EDR17513.1| sun protein [Bacillus anthracis str. A0488]
gi|167510921|gb|EDR86312.1| sun protein [Bacillus anthracis str. A0193]
gi|167528156|gb|EDR90943.1| sun protein [Bacillus anthracis str. A0442]
gi|170126298|gb|EDS95189.1| sun protein [Bacillus anthracis str. A0389]
gi|170667202|gb|EDT17962.1| sun protein [Bacillus anthracis str. A0465]
gi|172080433|gb|EDT65520.1| sun protein [Bacillus anthracis str. A0174]
gi|190562668|gb|EDV16634.1| sun protein [Bacillus anthracis str. Tsiankovskii-I]
gi|195991479|gb|EDX55445.1| sun protein [Bacillus cereus W]
gi|196021749|gb|EDX60444.1| sun protein [Bacillus cereus 03BB108]
gi|218535394|gb|ACK87792.1| sun protein [Bacillus cereus AH820]
gi|227005311|gb|ACP15054.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. CDC 684]
gi|229268179|gb|ACQ49816.1| ribosomal RNA small subunit methyltransferase B [Bacillus anthracis
str. A0248]
gi|300377525|gb|ADK06429.1| sun protein [Bacillus cereus biovar anthracis str. CI]
gi|364513561|gb|AEW56960.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
F837/76]
gi|384387539|gb|AFH85200.1| Sun protein [Bacillus anthracis str. H9401]
gi|401190002|gb|EJQ97052.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
ISP3191]
gi|401822539|gb|EJT21689.1| 16S rRNA methyltransferase B [Bacillus anthracis str. UR-1]
gi|403393285|gb|EJY90530.1| 16S rRNA methyltransferase B [Bacillus anthracis str. BF1]
Length = 444
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G +LD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSMIQFAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|435848990|ref|YP_007311240.1| NOL1/NOP2/sun family putative RNA methylase [Natronococcus occultus
SP4]
gi|433675258|gb|AGB39450.1| NOL1/NOP2/sun family putative RNA methylase [Natronococcus occultus
SP4]
Length = 302
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 82/250 (32%), Positives = 118/250 (47%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSA--VLELGKQFVVQKDDLVPDLLIL---PP 104
++D A + P VRVNT+K VD A VLE + + D P +L L P
Sbjct: 11 VDDFEAFLAACERPLGNAVRVNTIKATVDRARAVLE-AEDVGYEGADWNPRVLRLETDSP 69
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
G +G Q + S++ A L P+PG +V D C+APG K LAALM +G
Sbjct: 70 GSTWASFHGYTHG----QEEVSAVPATVLDPEPGERVWDCCAAPGGKATQLAALMDDRGT 125
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
+VA + N R+ L+ + GA ++ V + D N + + E L+D CS GT
Sbjct: 126 VVANDSNLGRISALRFNAERLGATSLAVTNDDARNYSLERFDFEEFDRSLVDAPCSCEGT 185
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQV 283
+ D L + G+ L+++S QK LR A+ + VVYSTC+
Sbjct: 186 IRKNPD-ALDGWSEGY---------LDEVSGIQKGILRRAVQATREDGTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE VI+ VL
Sbjct: 236 ENEAVIQHVL 245
>gi|379722975|ref|YP_005315106.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
mucilaginosus 3016]
gi|378571647|gb|AFC31957.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus
mucilaginosus 3016]
Length = 541
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/266 (29%), Positives = 130/266 (48%), Gaps = 17/266 (6%)
Query: 33 AIQLALAQLLVRNKVKSIEDLMA--LYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFV 89
A+ + + LVR + + A L + + P +R NT K+ ++ V L G+
Sbjct: 237 ALSASHPEWLVRRWIAQFGEAAAERLCEANNEPPRVSLRANTRKLSREALVERLRGEGLE 296
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
+ L P +I+ G ++ + G +Q ++S +VA + P+PG +VLD C+APG
Sbjct: 297 AEPSPLAPAGVIVRGGGNMALTQDYAEGLYSIQDESSMLVAEWVDPQPGERVLDCCAAPG 356
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
KT HLA M+G+G+IVAC++++ + +++ G +I L D L S
Sbjct: 357 GKTTHLAEKMQGRGEIVACDVHEHKHGLIREQAVRLGHESITTLTADARRLREHYAPESF 416
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR--HALSF 267
R ILLD CSG G + D TE E L ++ + Q++ L H L
Sbjct: 417 DR-ILLDAPCSGLGVIRRKPDMKWTK---------TEAE-LGEICSIQQELLEAVHGLLK 465
Query: 268 PGVERVVYSTCSIHQVENEDVIKSVL 293
PG +VYSTC++ EN + +++ L
Sbjct: 466 PGGV-LVYSTCTVEPAENGEAVRAFL 490
>gi|284161602|ref|YP_003400225.1| RNA methylase [Archaeoglobus profundus DSM 5631]
gi|284011599|gb|ADB57552.1| RNA methylase, NOL1/NOP2/sun family [Archaeoglobus profundus DSM
5631]
Length = 321
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 85/269 (31%), Positives = 131/269 (48%), Gaps = 25/269 (9%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
A + + +VR + E+ + L + + P+++RVNT+K+D + + L ++ F
Sbjct: 15 AKRYGYNEFIVRRWINFFGFEETVKLIEAMERGIPKHIRVNTIKIDENDLIERLRERGFK 74
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
++K ++ ++ + P + G ++ K+S + L PK V D SAPG
Sbjct: 75 LEKTEVPFCYKVVEEPYSIGATPEYLMGYYYVMEKSSCIPPLVLNPKSNELVADFASAPG 134
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGD---FLNLDPKDPA 206
KT LA LM +G ++A E NKER++ L D I G N V+H + F NL K
Sbjct: 135 GKTTFLAQLMNNRGVLIAIEANKERIQALIDNIHRMGVLNTAVIHMNAVRFCNLGLK--- 191
Query: 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
V ILLD CSG G + D SG ++E +KL QK+ + AL
Sbjct: 192 ---VDKILLDAPCSGEGVIHKDKDR---KRVSGR----KDIEFCSKL---QKELVESALK 238
Query: 267 F--PGVERVVYSTCSIHQVENEDVIKSVL 293
PG +VYSTC++ ENE VI+ VL
Sbjct: 239 SLKPG-GVLVYSTCTLAPEENELVIQYVL 266
>gi|56964082|ref|YP_175813.1| RNA-binding protein Sun [Bacillus clausii KSM-K16]
gi|56910325|dbj|BAD64852.1| RNA-binding protein Sun [Bacillus clausii KSM-K16]
Length = 447
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/275 (28%), Positives = 123/275 (44%), Gaps = 18/275 (6%)
Query: 29 LHKGAIQLALAQLLVRNKVKSI--EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK 86
+ + A+Q + Q L+ + +D +A+ ++P +RVN +K V LG
Sbjct: 141 IERAAVQTSHPQWLMARWMNQYGEDDAIAMANANNIPPEVCLRVNRMKTTAAELVAHLGN 200
Query: 87 QFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDAC 145
+ V ++ L+PDL ++ + G Q +AS +VA L P+ G VLDAC
Sbjct: 201 EGVEAERSKLLPDLAVIIKKGNPFGGEAYKKGLFTAQDEASMLVAKLLGPEEGMDVLDAC 260
Query: 146 SAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205
+APG KT H+A M G G I+A +L+ +V+ + + G NIE D L K
Sbjct: 261 AAPGGKTTHIAEQMNGTGHILALDLHPHKVKLIAEQAARLGLENIETRAEDARTLQTK-- 318
Query: 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 265
+L+D C+G G + D TE + + ++ Q L HA
Sbjct: 319 --KHYNRVLVDAPCTGFGVIRRKPDIRWSK---------TEKD-VKHIANVQAAILAHAS 366
Query: 266 SF-PGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
F +VYSTC+I + ENE I+ L F
Sbjct: 367 QFVKQGGTLVYSTCTIEKEENEHAIERFLDTHPQF 401
>gi|292670256|ref|ZP_06603682.1| RNA methyltransferase Sun [Selenomonas noxia ATCC 43541]
gi|292648208|gb|EFF66180.1| RNA methyltransferase Sun [Selenomonas noxia ATCC 43541]
Length = 448
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 78/274 (28%), Positives = 126/274 (45%), Gaps = 16/274 (5%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLH 109
E AL + + P VR NTL++ + + V + VP+ +IL L+
Sbjct: 171 ERAEALCRCNNTSAPLSVRTNTLRISRTQLIEKFKAAGVKARTSAWVPEGVILRAHGALN 230
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
V + G +Q ++S +V LAP+PG V+DAC+APG KT H+A M+ G+I+A +
Sbjct: 231 VLAPLHEGLAQVQDESSMLVTHVLAPEPGMTVIDACAAPGGKTTHIAQRMENCGRILAFD 290
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE-VRAILLDPSCSGSGTAAER 228
+ +E++RR++ K G I ++ L+ Y E +L+D CSG G +
Sbjct: 291 IYEEKIRRIERNAKRLG---ISIIEAAVLDAREIGAHYKEQADRVLVDAPCSGLGVLRRK 347
Query: 229 LDHLLPSHASGH-TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENED 287
D AS T P + E L + +K GV +VYSTC++ EN
Sbjct: 348 PDARWRKSASDRKTLPPLQREILASAAQTVRKG--------GV--LVYSTCTMEDCENTA 397
Query: 288 VIKSVLPIAMSFGFQLATPFPNGTAEASQFLKAL 321
V++ L F + F G + Q ++ +
Sbjct: 398 VVEHFLKTHPDFSLEETGAFLPGKKRSEQMVQIM 431
>gi|228916502|ref|ZP_04080068.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
gi|228928913|ref|ZP_04091945.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228935179|ref|ZP_04098006.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228947584|ref|ZP_04109874.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|229123379|ref|ZP_04252583.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus 95/8201]
gi|229186105|ref|ZP_04313274.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus BGSC
6E1]
gi|228597281|gb|EEK54932.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus BGSC
6E1]
gi|228660155|gb|EEL15791.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus cereus 95/8201]
gi|228812104|gb|EEM58435.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar monterrey BGSC 4AJ1]
gi|228824544|gb|EEM70349.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar andalousiensis BGSC 4AW1]
gi|228830720|gb|EEM76325.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar pondicheriensis BGSC 4BA1]
gi|228843081|gb|EEM88163.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus thuringiensis
serovar pulsiensis BGSC 4CC1]
Length = 360
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 77 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKG 133
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G +LD+C+APG KT H+A +KG G++
Sbjct: 134 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQV 192
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 193 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 251
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 252 RRKPDIKLGK-------DKGDSERLSMIQFAILEKIAPLLKQGG--RLVYSTCTIEKIEN 302
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 303 EQVIERFL 310
>gi|254976172|ref|ZP_05272644.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-66c26]
gi|255315305|ref|ZP_05356888.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-76w55]
gi|255517973|ref|ZP_05385649.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-97b34]
gi|255651089|ref|ZP_05397991.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-37x79]
gi|260684154|ref|YP_003215439.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile CD196]
gi|260687813|ref|YP_003218947.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile R20291]
gi|306520940|ref|ZP_07407287.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-32g58]
gi|384361796|ref|YP_006199648.1| 16S rRNA methyltransferase B [Clostridium difficile BI1]
gi|423092611|ref|ZP_17080415.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 70-100-2010]
gi|260210317|emb|CBA64638.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile CD196]
gi|260213830|emb|CBE05814.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile R20291]
gi|357553481|gb|EHJ35228.1| ribosomal RNA small subunit methyltransferase B [Clostridium
difficile 70-100-2010]
Length = 441
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
Y+R NTLK+ + + +L + +V K +V + + + ++ + L G +Q +
Sbjct: 179 YIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFTIQDIS 238
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S +V + PK G VLD CSAPG K+ HLA LM G++VA ++ + +++ + T+
Sbjct: 239 SMIVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLINSTVNRL 298
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
G N+ V D +D + + S+ +L D CSG G + P
Sbjct: 299 GLKNVFVERFDASEID--ENSISKFDYVLADVPCSGFGIIRRK-----PE------IKYK 345
Query: 246 EMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGF 301
+ E L +++ QKK L +A + V +VYSTC+I VEN +++ S + +F F
Sbjct: 346 KEEELKDITSIQKKILENASKYVKVGGTLVYSTCTIQDVENINIVTSFVEENHNFEF 402
>gi|73662864|ref|YP_301645.1| tRNA and rRNA cytosine-C5-methylase [Staphylococcus saprophyticus
subsp. saprophyticus ATCC 15305]
gi|72495379|dbj|BAE18700.1| putative tRNA and rRNA cytosine-C5-methylase [Staphylococcus
saprophyticus subsp. saprophyticus ATCC 15305]
Length = 436
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 121/255 (47%), Gaps = 22/255 (8%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
VRVN ++ VD A+ L ++V++D + L + G + + +G + +Q K+S
Sbjct: 181 VRVNLTRISVDDAIRRLTDDYIVEQDREIETCLHIS-GKPIIESRMFKDGLISIQDKSSM 239
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+ +A K G +VLDACSAPG K H+A ++ G G + A ++++ ++ + I+
Sbjct: 240 FIGELMALKEGDQVLDACSAPGGKACHIAEILNGTGHVDATDIHEHKIDLIDFNIRKLRL 299
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP--- 244
+NI D + D Y + IL+D CSG G + + + S H +
Sbjct: 300 SNISAFEHD--ATEKYDKVYDK---ILVDAPCSGLGVLRHKPE--IKYEQSQHAIESLVE 352
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-QL 303
++E LN + K PG ++YSTC+I Q+ENE+V+ + L F F Q
Sbjct: 353 IQLEILNNVKYNVK---------PG-GTMIYSTCTIEQMENENVVYTFLKENKDFEFDQF 402
Query: 304 ATPFPNGTAEASQFL 318
P + Q L
Sbjct: 403 EHPITGEKVKTMQIL 417
>gi|433422122|ref|ZP_20405923.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. BAB2207]
gi|448595829|ref|ZP_21653276.1| tRNA and rRNA cytosine-C5-methylase [Haloferax alexandrinus JCM
10717]
gi|432198703|gb|ELK54957.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sp. BAB2207]
gi|445742283|gb|ELZ93778.1| tRNA and rRNA cytosine-C5-methylase [Haloferax alexandrinus JCM
10717]
Length = 313
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFAACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG +V D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---------DPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K D ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPFGERTPERDGSFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278
S GT + D L D M + ++ QK LR A+ VVYSTC
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVKSVAGIQKGILRRAVQVTKAGGTVVYSTC 239
Query: 279 SIHQVENEDVIKSVL 293
+ ENE ++ VL
Sbjct: 240 TFAPEENEAILDFVL 254
>gi|448624613|ref|ZP_21670561.1| tRNA and rRNA cytosine-C5-methylase [Haloferax denitrificans ATCC
35960]
gi|445749818|gb|EMA01260.1| tRNA and rRNA cytosine-C5-methylase [Haloferax denitrificans ATCC
35960]
Length = 313
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFAACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG +V D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---------DPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K D ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPYGERTPERDASFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278
S GT + D L D M + ++ QK LR A+ VVYSTC
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVKSVAGIQKGILRRAVQVTKAGGTVVYSTC 239
Query: 279 SIHQVENEDVIKSVL 293
+ ENE ++ VL
Sbjct: 240 TFAPEENEAILDFVL 254
>gi|442805500|ref|YP_007373649.1| ribosomal RNA small subunit methyltransferase B [Clostridium
stercorarium subsp. stercorarium DSM 8532]
gi|442741350|gb|AGC69039.1| ribosomal RNA small subunit methyltransferase B [Clostridium
stercorarium subsp. stercorarium DSM 8532]
Length = 449
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 128/273 (46%), Gaps = 26/273 (9%)
Query: 30 HKGAIQLALAQLLVRNKVK------SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLE 83
K +I+ + + LVR + + E L A + PD VR+NTLK +S V +
Sbjct: 143 EKLSIKYSFPEYLVREWISVFGENFTEELLKAFLERPDFS----VRINTLKTTKESVVED 198
Query: 84 LGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVL 142
L + + + L L D+ G + +Q ++S +VA L PKPG K+L
Sbjct: 199 LNSHGIETLPGRYLDEALYLKNISDISNLDAFQKGKITVQDESSMIVARILDPKPGEKIL 258
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
D C+APG KT H+ LM+ +G I A ++++ ++ + + K G I D L L
Sbjct: 259 DTCAAPGGKTTHIGQLMQNRGHIDAWDVHEHKIALINENAKRLGVEIINASQQDALYL-- 316
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
+ A +L+D CSG+G + D + E L+ L QKK L
Sbjct: 317 LNEAKGVYDRVLVDAPCSGTGIIRRKPD----------IKWKRKKEDLSNLVEIQKKILY 366
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+A + PG +VYSTCS+ ENE+V+K L
Sbjct: 367 NAGRYVKPG-GVLVYSTCSVDVRENEEVVKFFL 398
>gi|448348426|ref|ZP_21537275.1| RNA methylase, NOL1/NOP2/sun family protein [Natrialba taiwanensis
DSM 12281]
gi|445642793|gb|ELY95855.1| RNA methylase, NOL1/NOP2/sun family protein [Natrialba taiwanensis
DSM 12281]
Length = 302
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 84/274 (30%), Positives = 119/274 (43%), Gaps = 27/274 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
I+D A + P VRVNT+K V+ A L + V + D P +L L PG
Sbjct: 11 IDDFEAFLAACERPLGNAVRVNTIKTSVERATTALEEDGVAYDQADWNPRVLRLETNSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K LAALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPVVLDPRPGDRVWDCCAAPGGKATQLAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT- 224
VA + N R+ L+ + GA ++ V + D N + + E L+D CS GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATSLAVTNDDARNYSLQRFPFDEFDRALVDAPCSCEGTI 186
Query: 225 --AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281
+ LD+ P H +N ++ QK LR AL VVYSTC+
Sbjct: 187 RKNPDALDNWSPDH-------------INSVAGIQKGILRRALQATCEGGTVVYSTCTFA 233
Query: 282 QVENEDVIKSVLPI--AMSFGFQLATPFPNGTAE 313
ENE V++ L F L + G AE
Sbjct: 234 PEENEAVVQHALETEDCRVVDFDLGLEYAPGLAE 267
>gi|429737562|ref|ZP_19271420.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
oral taxon 138 str. F0429]
gi|429152368|gb|EKX95198.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
oral taxon 138 str. F0429]
Length = 448
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/267 (29%), Positives = 127/267 (47%), Gaps = 20/267 (7%)
Query: 46 KVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-----QKDDLVPDLL 100
+ E AL + P VRVNTL+ + SA++E QF V + VPD +
Sbjct: 166 RAYGYERTEALCLCNNTSAPLSVRVNTLRTN-RSALME---QFAVAGAEARASRWVPDGI 221
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK 160
+L L P + G +Q ++S +VA L +PG V+D C+APG KT H+A M+
Sbjct: 222 VLHAHGALDDLPPLRAGLAQVQDESSMLVAHVLGAEPGMTVIDTCAAPGGKTTHIAQRME 281
Query: 161 GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCS 220
+G+I+A ++ +E++RR++ + G + IE D + A ++ +L+D CS
Sbjct: 282 NRGRILAFDIYEEKIRRIEQNARRLGISIIEAEMRDAREIGAAYEAMAD--RVLVDAPCS 339
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSI 280
G G + D AS P ++R SA + A+ GV +VYSTC++
Sbjct: 340 GLGVLRRKSDARWKKSASDRKTLPP-IQRAILASAAR------AVKSGGV--LVYSTCTM 390
Query: 281 HQVENEDVIKSVLPIAMSFGFQLATPF 307
+ EN V++ L F + F
Sbjct: 391 EECENAAVVQDFLRAHPHFTLEQTGAF 417
>gi|386725760|ref|YP_006192086.1| 16S rRNA methyltransferase B [Paenibacillus mucilaginosus K02]
gi|384092885|gb|AFH64321.1| 16S rRNA methyltransferase B [Paenibacillus mucilaginosus K02]
Length = 505
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 127/259 (49%), Gaps = 17/259 (6%)
Query: 40 QLLVRNKVKSIEDLMA--LYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLV 96
+ LVR + + A L + + P +R NT K+ ++ V L G+ + L
Sbjct: 208 EWLVRRWIAQFGEAAAERLCEANNEPPRVSLRANTRKLSREALVERLRGEGLEAEPSPLA 267
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
P +I+ G ++ + G +Q ++S +VA + P+PG +VLD C+APG KT HLA
Sbjct: 268 PAGVIVRGGGNMALTQDYAEGLYSIQDESSMLVAEWVDPQPGERVLDCCAAPGGKTTHLA 327
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
M+G+G+IVAC++++ + +++ G +I L D L S R ILLD
Sbjct: 328 EKMQGRGEIVACDVHEHKHGLIREQAVRLGHESITTLTADARRLREHYAPESFDR-ILLD 386
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR--HALSFPGVERVV 274
CSG G + D TE E L ++ + Q++ L H L PG +V
Sbjct: 387 APCSGLGVIRRKPDMKWTK---------TEAE-LGEICSIQQELLEAVHGLLKPG-GVLV 435
Query: 275 YSTCSIHQVENEDVIKSVL 293
YSTC++ EN + +++ L
Sbjct: 436 YSTCTVEPAENGEAVRAFL 454
>gi|358339374|dbj|GAA47450.1| ribosomal RNA methyltransferase Nop2 [Clonorchis sinensis]
Length = 700
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/251 (32%), Positives = 119/251 (47%), Gaps = 33/251 (13%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP----DLLILP 103
+DL+ + ++ +P +R NTLK ++ A++ G V D L P L++
Sbjct: 412 KDLIEFIEANEIDRPVTLRTNTLKTRRRELAQALINRG----VNLDPLEPWSRVGLVVYS 467
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
L P + G LQG +S + ALAPKPG ++LD C+APG K ++A LMK G
Sbjct: 468 SQVPLGATPEYLAGHYILQGASSMLPVMALAPKPGERILDLCAAPGGKATYIAQLMKNTG 527
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGD---FLNLDPKDPAYSEVRAILLDPSCS 220
+ A ELN R + L G N V D F NL S +LLD CS
Sbjct: 528 TLFANELNPTRAKALIGNCHRMGIVNTIVCVEDGRKFPNL------MSNFDRVLLDAPCS 581
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTC 278
G+G A+ DH + + + E + + + QK+ + A+ PG +VYSTC
Sbjct: 582 GTGIIAK--DHSVKASKTN--------EDIQRCATLQKELILAAVDACKPG-GYIVYSTC 630
Query: 279 SIHQVENEDVI 289
SI ENE +I
Sbjct: 631 SILVEENEAII 641
>gi|292655744|ref|YP_003535641.1| tRNA and rRNA cytosine-C5-methylase [Haloferax volcanii DS2]
gi|448289731|ref|ZP_21480894.1| tRNA and rRNA cytosine-C5-methylase [Haloferax volcanii DS2]
gi|291371381|gb|ADE03608.1| tRNA and rRNA cytosine-C5-methylase [Haloferax volcanii DS2]
gi|445581248|gb|ELY35609.1| tRNA and rRNA cytosine-C5-methylase [Haloferax volcanii DS2]
Length = 313
Score = 96.7 bits (239), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 117/255 (45%), Gaps = 22/255 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFAACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILELEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG +V D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---------DPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K D ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPYGERTPERDASFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278
S GT + D L D M + ++ QK LR A+ VVYSTC
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVKSVAGIQKGILRRAVQVTKAGGTVVYSTC 239
Query: 279 SIHQVENEDVIKSVL 293
+ ENE ++ VL
Sbjct: 240 TFAPDENEAILDFVL 254
>gi|383450764|ref|YP_005357485.1| Ribosomal RNA small subunit methyltransferase B [Flavobacterium
indicum GPTSA100-9]
gi|380502386|emb|CCG53428.1| Ribosomal RNA small subunit methyltransferase B [Flavobacterium
indicum GPTSA100-9]
Length = 406
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 118/241 (48%), Gaps = 23/241 (9%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKDDL--VPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+RVNTLK + L +++ ++ + L PD L+L ++ + NG +Q +
Sbjct: 155 LRVNTLKNTKEKLQKLLNEEYQIETEVLKDYPDALVLKERANVFMTEAFKNGLFEVQDAS 214
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S +VA L KPG +V+DAC+ G K++H+A+L++ KG+I+A +L + ++++LK K +
Sbjct: 215 SQLVARLLDIKPGMRVVDACAGAGGKSLHIASLLENKGQIIAMDLYESKLKQLKLRAKRN 274
Query: 186 GAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD---HLLPSHASGH 240
G NIE V+ G Y + +L+D CSG G D L P
Sbjct: 275 GVHNIETRVIEG----TKSIKKLYDKADRVLIDAPCSGLGVLKRNPDSKWKLQPEFV--E 328
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
T+ E L S K PG ++VY+TCSI EN++ ++ L +
Sbjct: 329 NIKKTQQEVLENYSKMVK---------PG-GKLVYATCSILPSENQEQVQKFLATELGKN 378
Query: 301 F 301
F
Sbjct: 379 F 379
>gi|20807946|ref|NP_623117.1| tRNA and rRNA cytosine-C5-methylase [Thermoanaerobacter
tengcongensis MB4]
gi|254479565|ref|ZP_05092880.1| ribosomal RNA small subunit methyltransferase B [Carboxydibrachium
pacificum DSM 12653]
gi|20516516|gb|AAM24721.1| tRNA and rRNA cytosine-C5-methylases [Thermoanaerobacter
tengcongensis MB4]
gi|214034503|gb|EEB75262.1| ribosomal RNA small subunit methyltransferase B [Carboxydibrachium
pacificum DSM 12653]
Length = 443
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/252 (27%), Positives = 128/252 (50%), Gaps = 24/252 (9%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHP 112
L +L + P++ RVNTLK+ + +L ++ + K + + + HP
Sbjct: 167 LASLNEKPEIS----YRVNTLKISAEELQEKLKREDISYKKGYYLEEALYIDLKNPESHP 222
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
+ +G + Q +AS +V+ L+P+ G ++LD C+APG KT H++ +M+ G++VA +L+
Sbjct: 223 IYKDGLIHPQDEASMLVSRILSPQKGERILDVCAAPGGKTTHISQIMENTGEVVAFDLHP 282
Query: 173 ERVRRLKDTIKLSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
R++ +++ + G N+ EV F+N + + +L D C+G G ++ D
Sbjct: 283 HRLKLIEENCRRLGVTNVKTEVFDATFVN----ESYLEKADRVLADVPCTGIGIIRKKPD 338
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENED 287
L S+ + E L L Q + L+ + + GV +VYSTC+I + EN++
Sbjct: 339 IKLKSY---------DKEELRGLIERQYRILKSSSLYVKKGGV--LVYSTCTIGREENQE 387
Query: 288 VIKSVLPIAMSF 299
VI+ L +F
Sbjct: 388 VIERFLKEHKNF 399
>gi|119512103|ref|ZP_01631196.1| Fmu, rRNA SAM-dependent methyltransferase [Nodularia spumigena
CCY9414]
gi|119463261|gb|EAW44205.1| Fmu, rRNA SAM-dependent methyltransferase [Nodularia spumigena
CCY9414]
Length = 449
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 86/284 (30%), Positives = 136/284 (47%), Gaps = 32/284 (11%)
Query: 19 PVGDAEKFLMLHK---GAIQLALAQL-LVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
P E+ +LH IQ+ L QL LV + +++ D M QTP + +R+N L+
Sbjct: 138 PENPVERLGILHSFPDWIIQVWLDQLDLV--ETENLCDWMN--QTPTID----LRINPLR 189
Query: 75 MDVDS--AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAA 132
++ A LE + ++ L ++ + P G +Q ++ +V
Sbjct: 190 TSIEEVEAALESAGILTRRVNNCPQALRLIGSTGAIQNLPGFNEGWWSVQDASAQLVGYL 249
Query: 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEV 192
L P+ G V+DAC+APG KT H+A LM +G+I AC+ R+R+LK+ + +I++
Sbjct: 250 LHPQAGEVVIDACAAPGGKTTHIAELMGDEGEIWACDRTASRLRKLKENAQRLHLQSIQI 309
Query: 193 LHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLN 251
GD NL P ++ +LLD CSG GT L HA +E +
Sbjct: 310 CTGDSRNL----PQFNHRGDRLLLDAPCSGLGT--------LHRHADARWRQ--TLESVQ 355
Query: 252 KLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+LS Q + + F PG +VY+TC++H ENE VI + L
Sbjct: 356 ELSILQTELISQTSQFVKPG-GVLVYATCTLHPAENEGVISTFL 398
>gi|288958791|ref|YP_003449132.1| tRNA/rRNA cytosine-C5-methylase [Azospirillum sp. B510]
gi|288911099|dbj|BAI72588.1| tRNA/rRNA cytosine-C5-methylase [Azospirillum sp. B510]
Length = 474
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 83/257 (32%), Positives = 123/257 (47%), Gaps = 25/257 (9%)
Query: 65 PRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +R+N LK + SA+ L K Q + P L + L +G V +Q
Sbjct: 173 PLDLRINPLKANQQSAIKALAKAQITAEVTRWSPLGLRVKGRPPLGSVDAFKDGLVEIQD 232
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
+ S MVA A+APKPG +V+D C+ G KT+ +AALMK KG++VAC++ +R++R + +
Sbjct: 233 EGSQMVALAVAPKPGHQVVDFCAGAGGKTLAVAALMKNKGRVVACDVLDKRLKRAAERFR 292
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYS-EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G NIE H DP + + +L+D CSG+GT D G
Sbjct: 293 RAGLHNIEA-HPLTSERDPWVKRHKRKFDRVLVDAPCSGTGTWRRNPDARWRQLGPG--- 348
Query: 243 DPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVL------- 293
L +L Q L A L PG R++Y+TCS+ ENE +++ L
Sbjct: 349 -------LEQLLPLQANILDSAARLVKPG-GRLIYATCSLLHDENEAQVEAFLQTHHDFI 400
Query: 294 --PIAMSFGFQLATPFP 308
PIA + + A P P
Sbjct: 401 VKPIAEVWAEEEAGPPP 417
>gi|225865846|ref|YP_002751224.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
03BB102]
gi|225787241|gb|ACO27458.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
03BB102]
Length = 444
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 123/248 (49%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S ++A AL P G +LD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLIARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + G N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSMIQFAILEKIAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|294884401|ref|XP_002771134.1| williams-beuren syndrome critical region protein, putative
[Perkinsus marinus ATCC 50983]
gi|239874438|gb|EER02950.1| williams-beuren syndrome critical region protein, putative
[Perkinsus marinus ATCC 50983]
Length = 304
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/231 (32%), Positives = 117/231 (50%), Gaps = 47/231 (20%)
Query: 112 PLIVNGCVFLQGKASSMVAAAL--APKPGWK--VLDACSAPGNKTVHLAALMKGK---GK 164
PL+ + + LQ + S + A +L +PG K V+DAC++P +KT+H+ LM+ + G
Sbjct: 16 PLVKDFTLVLQDRGSCLSAHSLLAGVQPGEKITVVDACASPNSKTIHMLQLMRYRKIEGT 75
Query: 165 IVACELNKERVRRLKDTIKLSG----------------------AANIEVLHGDFLNLDP 202
++A EL+ ++ + L D + +G ++EV GDF+
Sbjct: 76 MIAMELDPKQAKVLLDRLAKAGFLPRDGTRTSDEVVHLSAEHSPDISVEVRVGDFIKY-- 133
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
+ +EV + LDPSCSGSG L+ HA ++ +RL KLS+FQ + L
Sbjct: 134 ---SSAEVTHVNLDPSCSGSG--------LVDVHAD---SESVGAQRLRKLSSFQCRMLD 179
Query: 263 HALS-FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTA 312
HAL+ F V V YSTCSI EN +V+K L S G++ PF G+
Sbjct: 180 HALTAFHAVRTVCYSTCSIRNEENGEVVKKALNRLQS-GYRREWPFEVGSC 229
>gi|375011623|ref|YP_004988611.1| tRNA/rRNA cytosine-C5-methylase [Owenweeksia hongkongensis DSM
17368]
gi|359347547|gb|AEV31966.1| tRNA/rRNA cytosine-C5-methylase [Owenweeksia hongkongensis DSM
17368]
Length = 404
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/253 (30%), Positives = 118/253 (46%), Gaps = 18/253 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDL-LILPPGCDLH 109
+D + Q ++P +R NTLK K+ V + ++ LI ++
Sbjct: 141 KDWPIIAQNLNLPAELIIRANTLKTTRQELKTIFKKEGVETHNFSENEVGLIFKQRQNIF 200
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
+ +G +Q S ++A L P+PG KV+DAC+ G KT+HLAALM+ KG ++A +
Sbjct: 201 SNASFKSGLFEVQDGGSQLIAPFLRPEPGMKVIDACAGAGGKTLHLAALMQNKGSLIAMD 260
Query: 170 LNKERVRRLKDTIKLSGAANIEVLH--GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+ + ++ LK K +GA NIE+ H G KD A +LLD CSG+G
Sbjct: 261 VEERKLVELKRRAKRNGAHNIEIKHIEGSKTIKRLKDKA----DRLLLDVPCSGTGVIKR 316
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR-HALSFPGVERVVYSTCSIHQVENE 286
D T + E L K+ Q+ L ++ +VY+TCSI ENE
Sbjct: 317 NPD----------TKWKIKPEDLEKVKGIQQDILNDYSTMLKSGGMMVYATCSILHSENE 366
Query: 287 DVIKSVLPIAMSF 299
D +K+ L F
Sbjct: 367 DQVKTFLAKREDF 379
>gi|374582947|ref|ZP_09656041.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus youngiae DSM 17734]
gi|374419029|gb|EHQ91464.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus youngiae DSM 17734]
Length = 452
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 115/243 (47%), Gaps = 14/243 (5%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDL 108
IE+ AL + + P P ++R NTLK+ + L ++ VQ VP+ L + L
Sbjct: 164 IEETEALCKVNNEPSPTWIRTNTLKISREDLTERLREEGITVQLGSRVPESLQISNFGAL 223
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
G +Q ++S +VA + P+PG VLDACSAPG K+ HLA +MK +GKI+A
Sbjct: 224 DQLDSFREGLFTVQDESSQLVAHVVNPQPGQSVLDACSAPGGKSTHLAQMMKNEGKILAF 283
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+++ ++ ++ + G IE GD +L P S+ +L+D CSG G +
Sbjct: 284 DIHAHKLELVEQLAQKLGITIIETQVGDARDL-PGIRLESQ-DCVLVDAPCSGLGIIRRK 341
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENED 287
D G L L A Q L A S +VYSTC+ EN +
Sbjct: 342 ADLRWQKEEQG----------LKDLPALQLAILERAASCVKNGGTLVYSTCTTEPDENFE 391
Query: 288 VIK 290
++K
Sbjct: 392 LVK 394
>gi|307110087|gb|EFN58324.1| hypothetical protein CHLNCDRAFT_30164, partial [Chlorella
variabilis]
Length = 399
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 123/270 (45%), Gaps = 52/270 (19%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLI 101
S+ + + L + +VP+P +R NTLK + EL + + +L P L++
Sbjct: 10 SVGEALELIEAQEVPRPVTLRTNTLK----TRRRELAGALINRGVNLDPIGNWSKVGLVV 65
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ P + G LQG +S + ALAP+ G +V+D +APG KT +LAALM+
Sbjct: 66 YESQVPVGATPEYMAGHYMLQGASSFLPCMALAPQEGEQVVDVAAAPGGKTTYLAALMRN 125
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
G + A E+NKER+ L ++ G N V + D L P+ V +LLD CSG
Sbjct: 126 TGVLFANEINKERLTSLTANLQRMGVTNTIVCNYDGRQL-PRVLGERSVDRVLLDAPCSG 184
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP---GVERVVYSTC 278
+G ++ DPT + +L P GV VVYSTC
Sbjct: 185 TGVISK---------------DPT-------------VKVGGSLGLPSGAGVV-VVYSTC 215
Query: 279 SIHQVENEDVIK--------SVLPIAMSFG 300
S+ ENE+V+ V+P + FG
Sbjct: 216 SMMVEENENVVNYALKRRDVKVVPCGLEFG 245
>gi|255525650|ref|ZP_05392583.1| sun protein [Clostridium carboxidivorans P7]
gi|296185410|ref|ZP_06853820.1| ribosomal RNA small subunit methyltransferase B [Clostridium
carboxidivorans P7]
gi|255510636|gb|EET86943.1| sun protein [Clostridium carboxidivorans P7]
gi|296050244|gb|EFG89668.1| ribosomal RNA small subunit methyltransferase B [Clostridium
carboxidivorans P7]
Length = 442
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 121/240 (50%), Gaps = 18/240 (7%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVH 111
L L + P + VRVN LK + + A EL K + +++ + P+ +I+ G ++ +
Sbjct: 169 LQGLNEVPAIT----VRVNNLKTNYEEAWEELKKNGYDIEEGKVCPEAIIINRGRNIENN 224
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
PL NG + +Q +++ MVA ++ K VLD CSAPG KT H+A L +GKI A +++
Sbjct: 225 PLFKNGLITVQDESAMMVAPSMELKENMTVLDLCSAPGGKTCHIAELTNNQGKIFAFDIH 284
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
+ ++ +K+ K G N++ G D + +L+D CSG G ++
Sbjct: 285 ENKLPLIKENAKRLGITNVKC--GTLDASKYMDIYEEKGDRVLIDVPCSGLGIIRKK--- 339
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIK 290
P + E L L QK + +A + +++Y+TC++++ ENE+ IK
Sbjct: 340 --PEIKWNK-----DKESLESLVKIQKTIMLNAAKYVKKNGKLIYATCTLNKEENEENIK 392
>gi|339009262|ref|ZP_08641834.1| ribosomal RNA small subunit methyltransferase B [Brevibacillus
laterosporus LMG 15441]
gi|338773740|gb|EGP33271.1| ribosomal RNA small subunit methyltransferase B [Brevibacillus
laterosporus LMG 15441]
Length = 453
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 116/252 (46%), Gaps = 21/252 (8%)
Query: 68 VRVNTLKMDVDSAVLELGKQF-VVQKDDLVPDLLILPPGCDLHV--HPLIVNGCVFLQGK 124
+RVN L+ D+ + E+ + F K +L PD L+L G H G +Q +
Sbjct: 186 IRVNRLRTTADALLQEMKEAFPEAAKSELTPDALLLQSG---HAAGSSWFQEGFCTIQDE 242
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
+S +VA AL P +VLDAC+APG KT H+A LM +G+I+AC+++ + ++ K
Sbjct: 243 SSMLVAPALHLTPNLRVLDACAAPGGKTTHMAELMGNQGEILACDVHPHKRELIEQNAKR 302
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
G I + D +L D E ILLD CSG G + P TA
Sbjct: 303 LGITIITTMVADAADL--VDRNVGEFDRILLDAPCSGFGVIRRK-----PDLKWNKTA-- 353
Query: 245 TEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-- 301
E + +S Q L R A +VYSTC+I EN+DV++ + +
Sbjct: 354 ---EDIKAISEIQYDLLERVAPLLKPDGYLVYSTCTIDSQENQDVVERFIAEHPEYELDK 410
Query: 302 QLATPFPNGTAE 313
LA P G E
Sbjct: 411 SLAEDLPTGLTE 422
>gi|229162801|ref|ZP_04290758.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
R309803]
gi|228620683|gb|EEK77552.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
R309803]
Length = 360
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 116/235 (49%), Gaps = 15/235 (6%)
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P VP RVN K+ V+ A+ L + + ++ DL D + + G H G
Sbjct: 90 PPVPT---ARVNVDKVTVEEAIELLASEGIEAKRGDLSDDAIQIERGNVAHTDAF-KKGF 145
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+ +Q ++S +VA AL P G VLD+C+APG KT H+A +KG GK+++ +L+ +VR +
Sbjct: 146 LSIQDESSMLVARALEPNEGDVVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLI 205
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
K G N+E D + + A IL+D CSG G + D L
Sbjct: 206 KQQADRLGLENVETKALDARKVQ-EHFANETFDKILVDAPCSGFGVIRRKPDIKLGK--- 261
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
D + ERL+ + + + L G R+VYSTC+I ++ENE VI+ L
Sbjct: 262 ----DKGDSERLSTIQLAILEKIAPLLKQGG--RLVYSTCTIEKIENEQVIERFL 310
>gi|341581694|ref|YP_004762186.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus sp. 4557]
gi|340809352|gb|AEK72509.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus sp. 4557]
Length = 309
Score = 96.3 bits (238), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 120/247 (48%), Gaps = 18/247 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E +A+ + + P PR RVNTL+++V L K+ F ++ + L +
Sbjct: 24 ERALAIAEAMERPLPRCFRVNTLRIEVPKLTKLLNKKGFQFKRVPWAREGFCLTREPFSI 83
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P ++G +++Q +S AL PKPG V D +APG KT +LA LM+ +G I A
Sbjct: 84 TSTPEYLSGLLYIQEASSMYPPVALEPKPGETVADMAAAPGGKTSYLAQLMENEGIIYAF 143
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ +ER++ + + G N ++H L+++ E ILLD C+GSGT
Sbjct: 144 DVGEERLKETRLNLSRLGVTNTVLIHSSSLHIEELG---VEFDRILLDAPCTGSGTI--- 197
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENE 286
H P + T ME + Q + + AL PG +VYSTCS+ ENE
Sbjct: 198 --HKNPERKANRT-----MEDVKFCQNLQMQLIEKALEVLKPG-GVLVYSTCSLEPEENE 249
Query: 287 DVIKSVL 293
V++ VL
Sbjct: 250 FVVQWVL 256
>gi|229025307|ref|ZP_04181726.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1272]
gi|228735998|gb|EEL86574.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1272]
Length = 387
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 19/237 (8%)
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P VP RVN K+ V+ A+ L + + ++ DL D + + G H G
Sbjct: 117 PPVPT---ARVNVDKVTVEEAIGLLANEGIEAKRGDLSDDAIQIERGNVAHTEAF-KKGF 172
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+ +Q ++S +VA AL P G +VLD+C+APG KT H+A +KG GK+++ +L+ +VR +
Sbjct: 173 LSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLI 232
Query: 179 KDTIKLSGAANIEVLHGDFLNLDP--KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
+ G N+E D + ++ + + IL+D CSG G + D L
Sbjct: 233 RQQADRLGLENVETKALDARKVQEHFENETFDK---ILVDAPCSGFGVIRRKPDIKLGK- 288
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
D + ERL+ + + + L G R+VYSTC+I ++ENE VI+ L
Sbjct: 289 ------DKGDSERLSTIQFAILEKIAPLLKQGG--RLVYSTCTIEKIENEQVIERFL 337
>gi|383625298|ref|ZP_09949704.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma lacisalsi
AJ5]
gi|448700278|ref|ZP_21699386.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma lacisalsi
AJ5]
gi|445779818|gb|EMA30733.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma lacisalsi
AJ5]
Length = 302
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLIL---PPG 105
++D A P VRVNT+K V+ A L ++ V + D P +L L PG
Sbjct: 11 VDDFEAFLAACRRPLGTAVRVNTIKTSVERATATLEEEGVEFDQADWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V DAC+APG K +AALM +G +
Sbjct: 71 ATWASFHGFTHG----QEEVSAVPPVVLDPQPGERVWDACAAPGGKATQIAALMDDEGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA N+ V + D N ++ E L+D CS GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATNLAVTNADARNYSLAPFSFDEFDRALVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVE 284
+ D L + + H A +S QK LR A+ + VVYSTC+ E
Sbjct: 187 RKNPD-ALENWSEDHIA---------SVSGIQKGILRRAVQATTAGGTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V++ VL
Sbjct: 237 NEAVVQHVL 245
>gi|300854445|ref|YP_003779429.1| rRNA subunit cytosine-methyltransferase [Clostridium ljungdahlii
DSM 13528]
gi|300434560|gb|ADK14327.1| predicted rRNA subunit cytosine-methyltransferase [Clostridium
ljungdahlii DSM 13528]
Length = 443
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/230 (30%), Positives = 120/230 (52%), Gaps = 15/230 (6%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+PK VRVN LK+D S EL K + +QK + + +++ G ++ +PL G +
Sbjct: 176 IPKVT-VRVNGLKIDYKSVWDELLKNGYDIQKGKICKEAVVINRGSNIEENPLFKKGYIT 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q +++ +VA + P+ VLD CSAPG K+ H+A LMK G I A +L++ ++R +++
Sbjct: 235 VQDESAMLVAHIVDPEENMTVLDMCSAPGGKSCHMAELMKNTGVIYAYDLHENKLRFVEE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
NI+ D + A ++ +L+D CSG G ++ P
Sbjct: 295 NANRMDIKNIKCNKLDAEKYVEQFEATAD--RVLIDVPCSGLGIVRKK-----PEIKWNK 347
Query: 241 TADPTEMERLNKLSAFQKKALRHALSF-PGVERVVYSTCSIHQVENEDVI 289
+ M+ LN L Q+K + +A + +++YSTC++++ ENED I
Sbjct: 348 S-----MKSLNSLINVQRKIMLNASRYVKDGGKLIYSTCTLNKSENEDNI 392
>gi|423389828|ref|ZP_17367054.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1X1-3]
gi|423418228|ref|ZP_17395317.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3X2-1]
gi|401106501|gb|EJQ14462.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG3X2-1]
gi|401641919|gb|EJS59636.1| ribosomal RNA small subunit methyltransferase B [Bacillus cereus
BAG1X1-3]
Length = 444
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 19/237 (8%)
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P VP RVN K+ V+ A+ L + + ++ DL D + + G H G
Sbjct: 174 PPVPT---ARVNVDKVTVEEAIGLLANEGIEAKRGDLSDDAIQIERGNVAHTEAF-KKGF 229
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+ +Q ++S +VA AL P G +VLD+C+APG KT H+A +KG GK+++ +L+ +VR +
Sbjct: 230 LSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLI 289
Query: 179 KDTIKLSGAANIEVLHGDFLNLDP--KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
+ G N+E D + ++ + + IL+D CSG G + D L
Sbjct: 290 RQQADRLGLENVETKALDARKVQEHFENETFDK---ILVDAPCSGFGVIRRKPDIKLGK- 345
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
D + ERL+ + + + L G R+VYSTC+I ++ENE VI+ L
Sbjct: 346 ------DKGDSERLSTIQFAILEKIAPLLKQGG--RLVYSTCTIEKIENEQVIERFL 394
>gi|229019063|ref|ZP_04175901.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1273]
gi|228742231|gb|EEL92393.1| Ribosomal RNA small subunit methyltransferase B [Bacillus cereus
AH1273]
Length = 369
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 119/237 (50%), Gaps = 19/237 (8%)
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
P VP RVN K+ V+ A+ L + + ++ DL D + + G H G
Sbjct: 99 PPVPT---ARVNVDKVTVEEAIGLLANEGIEAKRGDLSDDAIQIERGNVAHTEAF-KKGF 154
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+ +Q ++S +VA AL P G +VLD+C+APG KT H+A +KG GK+++ +L+ +VR +
Sbjct: 155 LSIQDESSMLVARALEPNEGDEVLDSCAAPGGKTTHIAERLKGTGKVMSLDLHAHKVRLI 214
Query: 179 KDTIKLSGAANIEVLHGDFLNLDP--KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
+ G N+E D + ++ + + IL+D CSG G + D L
Sbjct: 215 RQQADRLGLENVETKALDARKVQEHFENETFDK---ILVDAPCSGFGVIRRKPDIKLGK- 270
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
D + ERL+ + + + L G R+VYSTC+I ++ENE VI+ L
Sbjct: 271 ------DKGDSERLSTIQFAILEKIAPLLKQGG--RLVYSTCTIEKIENEQVIERFL 319
>gi|347963947|ref|XP_310591.5| AGAP000501-PA [Anopheles gambiae str. PEST]
gi|333466960|gb|EAA06459.6| AGAP000501-PA [Anopheles gambiae str. PEST]
Length = 761
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 76/240 (31%), Positives = 113/240 (47%), Gaps = 51/240 (21%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLV-----------------------P 97
V +PR+VR+NT +D++ A L + Q+++ ++ V P
Sbjct: 139 VKEPRFVRINTNVLDLEGAKRLLAEEQWMLVEERFVDYGAFIERVKTLADAEYMEDFHFP 198
Query: 98 DLLILPPGCD------LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNK 151
DLL+ P H+H + LQ KA + L P VLD C+APG K
Sbjct: 199 DLLVFPNSAKSFWSRATHLHDQFL-----LQNKACLLPTYLLKPSKKSVVLDMCAAPGLK 253
Query: 152 TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 211
T HLA LMK +G++ A E +++R + L G I+ +H D L+L D V
Sbjct: 254 TTHLACLMKNRGRVYAVERHEKRYQTLCQYASAFGV--IKTIHSDCLDL--TDEQLPGVE 309
Query: 212 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FPGV 270
+L+DPSCSGSG ++ +P + ERL KL+ Q K + HA++ FPGV
Sbjct: 310 FVLVDPSCSGSGMLQRQI-----------VPEPVDQERLFKLAGLQYKLVSHAMNAFPGV 358
>gi|421873665|ref|ZP_16305277.1| ribosomal RNA small subunit methyltransferase B [Brevibacillus
laterosporus GI-9]
gi|372457452|emb|CCF14826.1| ribosomal RNA small subunit methyltransferase B [Brevibacillus
laterosporus GI-9]
Length = 436
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/252 (31%), Positives = 116/252 (46%), Gaps = 21/252 (8%)
Query: 68 VRVNTLKMDVDSAVLELGKQF-VVQKDDLVPDLLILPPGCDLHV--HPLIVNGCVFLQGK 124
+RVN L+ D+ + E+ + F K +L PD L+L G H G +Q +
Sbjct: 169 IRVNRLRTTADALLQEMKEAFPEAAKSELTPDALLLQSG---HAAGSSWFQEGFCTIQDE 225
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
+S +VA AL P +VLDAC+APG KT H+A LM +G+I+AC+++ + ++ K
Sbjct: 226 SSMLVAPALHLTPNLRVLDACAAPGGKTTHIAELMGNQGEILACDVHPHKRELIEQNAKR 285
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
G I + D +L D E ILLD CSG G + P TA
Sbjct: 286 LGITIITTMVADAADL--LDRNVGEFDRILLDAPCSGFGVIRRK-----PDLKWNKTA-- 336
Query: 245 TEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-- 301
E + +S Q L R A +VYSTC+I EN+DV++ + +
Sbjct: 337 ---EDIKAISEIQYDLLERVAPLLKPDGYLVYSTCTIDSQENQDVVERFIAEHPEYELDK 393
Query: 302 QLATPFPNGTAE 313
LA P G E
Sbjct: 394 SLAEDLPTGLTE 405
>gi|253741386|gb|EES98257.1| Nucleolar protein NOP2 [Giardia intestinalis ATCC 50581]
Length = 497
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 130/293 (44%), Gaps = 38/293 (12%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
D + + P+P +RVN+LK+ +L + + + +L P L I
Sbjct: 205 DFHSFITACEKPRPLTIRVNSLKV----KRRQLAQMLIARGVNLDPLGDWCKDGLQIFSS 260
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
+ P + G +Q AS + AL PKPG ++LD +APG KT HL ALM+ G
Sbjct: 261 QVPIGATPEYLRGYYMIQDAASFLPPMALNPKPGERILDMSAAPGGKTTHLGALMQDSGM 320
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I+A ++N++R+ L+ + G + D L + V LLD CSG G
Sbjct: 321 ILANDMNRDRIPALQANLARMGVTCAVISCSDARELAQCTGNFDRV---LLDAPCSGLGV 377
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF----PGVERVV-YSTCS 279
++ D + ++ + E +++LS QK+ L HA P R+V YSTCS
Sbjct: 378 VSK--DASIKANRT--------FEDIHRLSHLQKELLNHAFDLLAKHPSNPRLVCYSTCS 427
Query: 280 IHQVENEDVIKSVL--------PIAMSFGFQLATPFPNGTAEASQFLKALSIY 324
+ ENE VI +L + SFG T F NG + KA Y
Sbjct: 428 VTLSENEAVIDYILHKRNVEVVDLPFSFGKPGITKF-NGMSYHPSIQKARRFY 479
>gi|408370747|ref|ZP_11168521.1| Fmu (Sun) domain-containing protein [Galbibacter sp. ck-I2-15]
gi|407743739|gb|EKF55312.1| Fmu (Sun) domain-containing protein [Galbibacter sp. ck-I2-15]
Length = 404
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 125/258 (48%), Gaps = 24/258 (9%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD--DLVPDLLILPPGCDL 108
+++ AL Q DV +RVN LK D + +L +Q + D + PD L+L ++
Sbjct: 141 KEIHALNQQADV----ILRVNRLKTD-KKTLQKLLRQENIDTDFINNYPDALLLKERSNI 195
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
NG +Q +S +VA L +PG +V+D C+ G KT+HLA+ M KG+I+A
Sbjct: 196 FKTEAFQNGLFEVQDASSQLVAELLEVEPGMRVVDCCAGAGGKTLHLASKMDNKGQIIAL 255
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ +++ LK + +GA NIE D + K ++ + +L+D CSG G
Sbjct: 256 DIYSNKLKELKRRARRNGAHNIETREIDSNKVIKK--LHNSMDRVLIDAPCSGLGVLRRN 313
Query: 229 LD---HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
D L P +T T+ E L+ S L G ++VY+TCSI EN
Sbjct: 314 PDAKWKLQPEFL--NTIRETQQEILSNYSKM--------LKVGG--KMVYATCSILPSEN 361
Query: 286 EDVIKSVLPIAMSFGFQL 303
+D + + L GF+L
Sbjct: 362 QDQVSAFLASLEGQGFKL 379
>gi|313126366|ref|YP_004036636.1| nol1/nop2/sun family RNA methylase [Halogeometricum borinquense DSM
11551]
gi|448286208|ref|ZP_21477443.1| nol1/nop2/sun family RNA methylase [Halogeometricum borinquense DSM
11551]
gi|312292731|gb|ADQ67191.1| NOL1/NOP2/sun family putative RNA methylase [Halogeometricum
borinquense DSM 11551]
gi|445575259|gb|ELY29738.1| nol1/nop2/sun family RNA methylase [Halogeometricum borinquense DSM
11551]
Length = 312
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/255 (33%), Positives = 120/255 (47%), Gaps = 23/255 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDL 108
++D A + D P P VRVNT+K VD A L + V + D P +L L
Sbjct: 11 VDDEDAFFAACDRPLPSVVRVNTIKTTVDRARSALDAENVGYEPTDWHPGILKLDERGPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG V DAC+APG+KT LA LM G ++
Sbjct: 71 TTWPYF-HGWLHGQEEVSALPALALDPEPGEIVWDACAAPGSKTTQLADLMDDTGVLIGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLN--LDPKDPAYSEVRAI------LLDPSCS 220
+ N R+ L+ + G +N+ V + D N L P + AI L+D CS
Sbjct: 130 DNNLGRLSALRHNAERLGVSNLVVTNQDARNYSLKPFGEDTDDSAAIDAFDKALVDAPCS 189
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTC 278
GT + D L D M ++ ++ QK LR A+ + PG VVYSTC
Sbjct: 190 CEGTIRKNPDAL----------DRWTMNHVHSVAGIQKGILRRAVQATRPG-GTVVYSTC 238
Query: 279 SIHQVENEDVIKSVL 293
+ ENE V+ VL
Sbjct: 239 TFAPEENEAVLDHVL 253
>gi|445059863|ref|YP_007385267.1| 16S rRNA methyltransferase B [Staphylococcus warneri SG1]
gi|443425920|gb|AGC90823.1| 16S rRNA methyltransferase B [Staphylococcus warneri SG1]
Length = 435
Score = 95.9 bits (237), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 141/295 (47%), Gaps = 23/295 (7%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + LV + V +E A+ Q+ P VR N + +D + L K+ ++
Sbjct: 142 AIQYSLPKWLVDHWVTHYGLEQTEAIAQSFLEPVATTVRANITRGSIDDIISALEKESYI 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
V +DD++P L + G + +G V +Q K+S VA + VLDACSAPG
Sbjct: 202 VDRDDVLPFCLHIS-GKPIVNSRAFKDGLVSIQDKSSMFVAHIMDLNRNDSVLDACSAPG 260
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
K H+A ++ +G + A +++ +++ + I+ NIE D +P ++
Sbjct: 261 GKACHIAEILSPEGHVDATDIHDHKIKLIDFNIRKLRLKNIEAYQH-----DATEPYVTQ 315
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269
IL+D CSG G + + +T ++ L +L + ++H + PG
Sbjct: 316 YDKILVDAPCSGFGVLRHKPE-------IKYTQSKNSIQSLVELQLQILENVKHNVK-PG 367
Query: 270 VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIY 324
++YSTC+I Q+ENE+V+ + L F F+ PF + + +K L I+
Sbjct: 368 -GSIIYSTCTIEQMENENVVYTFLKQNKDFEFE---PFQHPM--TGEMVKTLQIF 416
>gi|332159509|ref|YP_004424788.1| fmu protein [Pyrococcus sp. NA2]
gi|331034972|gb|AEC52784.1| fmu protein [Pyrococcus sp. NA2]
Length = 451
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 129/252 (51%), Gaps = 16/252 (6%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQ-KDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+RVNTLK DV+ + EL ++ V + + VP +L + + G + +Q +AS
Sbjct: 191 IRVNTLKADVEEIIEELEEEGVEVIRSERVPTILKIKGPYNFDSSKAFKKGKIIVQEEAS 250
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
++ + L P+PG V+D +APG KT H+A LMK KGKI A +++K R++RLK+ ++ G
Sbjct: 251 AVASIVLNPQPGEIVVDLAAAPGGKTTHMAELMKNKGKIYAFDIDKMRMKRLKEFVQRMG 310
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
++ + D P+ +LLD C+ SGT + +
Sbjct: 311 IKIVKPIIKDARKA-PEIIGEEVADKVLLDAPCTSSGTIGK----------NPELRWRLR 359
Query: 247 MERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-QL 303
E++ +++ Q++ L A L PG R++Y+TCSI + ENE+ IK L F L
Sbjct: 360 EEKIKEMAELQRELLESAAKLVKPG-GRLLYTTCSIFKEENEENIKWFLANHPEFKLVPL 418
Query: 304 ATPFPNGTAEAS 315
+P+ G E +
Sbjct: 419 NSPYDPGFLEGT 430
>gi|291563902|emb|CBL42718.1| tRNA and rRNA cytosine-C5-methylases [butyrate-producing bacterium
SS3/4]
Length = 301
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 80/247 (32%), Positives = 117/247 (47%), Gaps = 18/247 (7%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVH 111
++A YQ +P +RVN LK D ++ L + KD D +I+ + +
Sbjct: 25 ILAGYQ---ARRPVTLRVNPLKADRNTVEQALTGAGIAFKDVSWYEDAMIIEGAREPEIQ 81
Query: 112 --PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
P+ G ++LQ +S + LAPK G VLD +APG KT +AA+ + +I ACE
Sbjct: 82 ELPIYKEGGIYLQSLSSMLPPLFLAPKAGESVLDMAAAPGGKTTQMAAMTGNQAQITACE 141
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
NK R +LK ++ GA V+ D LD + ILLD CSGSGT R
Sbjct: 142 KNKARSEKLKYNLEKQGAFGTYVMVEDARKLDD----FFSFDRILLDAPCSGSGTVEVR- 196
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289
D + + S E+ + + + L G E ++YSTCSI + ENE ++
Sbjct: 197 DGVCRTKIS------KELVERSARTQEELLKKALKLLKSGHE-MIYSTCSILKEENEGLL 249
Query: 290 KSVLPIA 296
K VL A
Sbjct: 250 KRVLKSA 256
>gi|314933391|ref|ZP_07840756.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
caprae C87]
gi|313653541|gb|EFS17298.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
caprae C87]
Length = 435
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 132/285 (46%), Gaps = 35/285 (12%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AI+ +L + LV + V +E + Q+ P VR N + VD V +L + F
Sbjct: 142 AIEYSLPKWLVNHWVTHHGLEKTEEIAQSLLAPVKSTVRANISRGSVDDIVTKLENEGFN 201
Query: 90 VQKDDLVPDLLILPPGCDLHVH-PLIVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LHV IVN G V +Q K+S MVA + KVL
Sbjct: 202 VEKDDILP-------FC-LHVSGQTIVNSRAFKDGYVSIQDKSSMMVAHIMKLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G++ A +++ ++ ++ IK NI D
Sbjct: 254 DACSAPGGKACHMAEILSPEGQVDATDIHLHKIDLIQHNIKKLKLDNIHAFQH-----DA 308
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
+P IL+D CSG G + P T D ++ L L + ++
Sbjct: 309 TEPYKEMYDKILVDAPCSGLGVLRHK-----PEIKYTQTQDS--IQSLVDLQLQILENIK 361
Query: 263 HALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF 307
H + G + YSTC+I Q+ENE+VI + L F F+ PF
Sbjct: 362 HNIKSGGT--ITYSTCTIEQMENENVIYTFLKQNEEFEFE---PF 401
>gi|11499621|ref|NP_070863.1| proliferating-cell nucleolar antigen P120 [Archaeoglobus fulgidus
DSM 4304]
gi|2648496|gb|AAB89215.1| proliferating-cell nucleolar antigen P120, putative [Archaeoglobus
fulgidus DSM 4304]
Length = 324
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/275 (29%), Positives = 136/275 (49%), Gaps = 38/275 (13%)
Query: 33 AIQLALAQLLVRNKVKSIEDLMALYQTPDVPK------PRYVRVNTLKMDVDSAVLEL-- 84
A++ + +VR + D +T D+ + P+Y+R+NTLK+D + +LE
Sbjct: 16 AVKYGYDEFIVRRWLHFFGD-----ETEDIIRAFEEGIPKYIRINTLKID-EKGLLERLE 69
Query: 85 GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDA 144
+ F ++K ++ ++ + P + G ++ K+S + AL PKPG V+D
Sbjct: 70 SRGFKLKKTEVPYCFEVVEEPYSIGATPEYLMGYYYVMDKSSCIPPLALEPKPGEVVVDL 129
Query: 145 CSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204
++PG KT L+ LM+ KG ++A E KER++ L D I GA N+ V +N+D +
Sbjct: 130 AASPGGKTTFLSMLMENKGAVIAVEPQKERLQPLIDNINRMGAMNVAV-----INVDGRR 184
Query: 205 PAYSEVRA--ILLDPSCSGSGTAAERLDHLLPSHASGHTADP----TEMERLNKLSAFQK 258
++A +LLD C+G G + H PS + + + ++R L+AF
Sbjct: 185 VPAMGIKADRVLLDAPCTGEG-----IIHKDPSRKTDRGKEDILFCSSLQRELVLAAFD- 238
Query: 259 KALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L GV +VYSTCS+ ENE V+ +L
Sbjct: 239 -----CLKEGGV--MVYSTCSLTPEENEFVVDFLL 266
>gi|295696042|ref|YP_003589280.1| sun protein [Kyrpidia tusciae DSM 2912]
gi|295411644|gb|ADG06136.1| sun protein [Kyrpidia tusciae DSM 2912]
Length = 486
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 128/259 (49%), Gaps = 19/259 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLK---MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCD 107
E +AL ++ + P P +RVN L+ +V +V E G + + ++P +L + G D
Sbjct: 194 EATIALCESNNEPPPLTLRVNLLRSSVAEVMESVREAGGEG--RPSPVIPGVLRVS-GVD 250
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ +G +Q +++++ A L P+PGW+VLD C+APG K+ HLA MKG G++ A
Sbjct: 251 VSRLSTFRSGACSVQDESATLAAWTLQPEPGWEVLDLCAAPGGKSAHLAEWMKGTGRVTA 310
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+++ ++ ++ T + G N+ + D + P+ A L+D CSG G
Sbjct: 311 VDIHPHKIPLIERTARRLGLPNVHPVCADGRDA----PSLGIFDAALVDAPCSGLGVLRR 366
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENED 287
R + P +++ L KL A AL G+ +VY+TC++ + EN+
Sbjct: 367 RPELKWRRR-------PEDIQDLVKLQGELLAAAARALRPDGI--LVYATCTVCEAENDG 417
Query: 288 VIKSVLPIAMSFGFQLATP 306
V+++ L F L P
Sbjct: 418 VVEAFLAGPGGAAFDLEDP 436
>gi|255101745|ref|ZP_05330722.1| ribosomal RNA small subunit methyltransferase [Clostridium
difficile QCD-63q42]
Length = 441
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
Y+R NTLK+ + + +L + +V K +V + + + ++ + L G +Q +
Sbjct: 179 YIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFTIQDIS 238
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S +V + PK G +LD CSAPG K+ HLA LM G++VA ++ + +++ + T+
Sbjct: 239 SMIVGKVINPKEGSFILDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLINSTVNRL 298
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
G N+ V D +D + + S+ +L D CSG G + P
Sbjct: 299 GLKNVFVERFDASEID--ENSISKFDYVLADVPCSGFGIIRRK-----PE------IKYK 345
Query: 246 EMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGF 301
+ E L +++ QKK L +A + V +VYSTC+I VEN +++ S + +F F
Sbjct: 346 KEEELKDITSIQKKILENASKYVKVGGTLVYSTCTIQGVENINIVTSFVEENHNFEF 402
>gi|238019375|ref|ZP_04599801.1| hypothetical protein VEIDISOL_01239 [Veillonella dispar ATCC 17748]
gi|237864074|gb|EEP65364.1| hypothetical protein VEIDISOL_01239 [Veillonella dispar ATCC 17748]
Length = 451
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/285 (26%), Positives = 139/285 (48%), Gaps = 25/285 (8%)
Query: 21 GDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYV-RVNTLKMDVDS 79
+AE+ ++ + L + K K+I DL A + +PR R+NT+K+ ++
Sbjct: 147 SEAEEISFIYNQPLWLVNLWMNEMGKDKTI-DLCAWFN----EQPRLTARINTIKISIED 201
Query: 80 AVLELGK-QFVVQKDDLVPDLLILPP-GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKP 137
+ EL + V++D +P+++ + L +++G + KAS +VA + P+P
Sbjct: 202 CLKELQDLGWTVEQDTYIPEVVYINAHQGHLEKAKPVIDGHITFMDKASMLVAHVVDPQP 261
Query: 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA--NIEVLHG 195
G ++LD C+APG K++H+A+LM G I++C++ ++ + + G + + ++ G
Sbjct: 262 GERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLDLMNHNAQRLGVSIVSTKLQDG 321
Query: 196 DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSA 255
+L D + +L+D CSG G ++LD S L +L
Sbjct: 322 RYL----PDNWKEQFDRVLVDAPCSGLGILQKKLDMRWRKTES----------LLTELPP 367
Query: 256 FQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVLPIAMSF 299
Q + L A V +VYSTC+I+ ENEDV++ L +F
Sbjct: 368 LQLEILEKAAEMVKVNGYLVYSTCTINSGENEDVLEKFLATHKNF 412
>gi|24373769|ref|NP_717812.1| ribosomal RNA small subunit methyltransferase RsmB family
[Shewanella oneidensis MR-1]
gi|24348152|gb|AAN55256.1| ribosomal RNA small subunit methyltransferase RsmB family
[Shewanella oneidensis MR-1]
Length = 404
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 81/237 (34%), Positives = 113/237 (47%), Gaps = 22/237 (9%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P R++RVN LK+ D V +L +FV Q D V L + L G
Sbjct: 150 PPKRFLRVNGLKVSRDELVQKLATEFVSTQVVDSVDSALEVTSDSALFRTNSFKEGLFEQ 209
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q S VAAAL KPG +V+DAC+ G KT+H+AA M+GKG+++A ++ + ++ LK+
Sbjct: 210 QDAGSQRVAAALDAKPGMRVIDACAGAGGKTLHIAAQMQGKGRLLAMDVEQWKLDNLKER 269
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRA--ILLDPSCSGSGTAAERLDHLLPSHASG 239
+ +GA NIE L + K ++ A +LLD CSG G P
Sbjct: 270 ARRNGAHNIETR----LIVGSKTIKRLKLTADRVLLDVPCSGLGVLKRN-----PDAKWR 320
Query: 240 HTADPTEMERLNKLSAFQKKAL---RHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
TAD RL L QK L + G+ VVY+TCSI EN + + L
Sbjct: 321 DTAD-----RLPVLMELQKHILSSYSRMVKVGGI--VVYATCSIFPCENRGQVDAFL 370
>gi|319646043|ref|ZP_08000273.1| YloM protein [Bacillus sp. BT1B_CT2]
gi|317391793|gb|EFV72590.1| YloM protein [Bacillus sp. BT1B_CT2]
Length = 444
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 25/283 (8%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN LK D D+ + L + + ++ DL D + L G + P G V
Sbjct: 171 IPPKQTIRVNRLKNDRDTLLSRLNEAGIEAEEGDLSKDAVKLLKGT-IASTPFFKEGEVT 229
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL P+ G VLDAC+APG K+ H+ L++ GK+V+ +L++ +V+ +K+
Sbjct: 230 IQDESSMLVARALGPERGETVLDACAAPGGKSTHIGELLEDTGKVVSLDLHQHKVKLIKE 289
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY----SEVRAILLDPSCSGSGTAAERLDHLLPSH 236
G +NIE LD + + IL+D CSG G + D
Sbjct: 290 AAGRIGLSNIEA-----RALDARKAGEVFEPEQFDRILVDAPCSGFGVIRRKPD------ 338
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
++ P + RL + + L G +VYSTC++ ENE V+ + L
Sbjct: 339 -LKYSKTPEDSARLAGIQLAILNEIAPLLKTGGT--LVYSTCTMDPTENEQVMHAFLEEH 395
Query: 297 MSFGFQ--LATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337
F LA P +A+ ++K SI P + T F+
Sbjct: 396 DEFEADPTLAERLPE---KAAPYVKDGSIQILPHYFGTDGFFI 435
>gi|451999452|gb|EMD91914.1| hypothetical protein COCHEDRAFT_1133863 [Cochliobolus
heterostrophus C5]
Length = 728
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 19/249 (7%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFV-VQKDDLVPDLLILPPGCD 107
+ A ++ + P+P +R NTL+ D+ A++ G Q V K V L I
Sbjct: 287 EAQAFFEANETPRPIVIRTNTLRTHRRDLAQALINRGVQLEPVGKWSKV-GLQIFDAQVP 345
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
L P + G LQ +S + ALAP+ +VLD +APG KT HLAALMK G I A
Sbjct: 346 LGATPEYLAGHYILQAASSFLPVMALAPQENERVLDMAAAPGGKTTHLAALMKNTGCIFA 405
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+ NK+R + L I GA N+ V H L P+ S +LLD CSG+G A+
Sbjct: 406 NDANKDRAKGLIGNIHRLGARNVIVSHYSALEF-PR--VMSGFDRVLLDAPCSGTGVIAK 462
Query: 228 RLDHLLPSHASGHTADPTEMERLNK---LSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
D + ++ + AD ++ L K L+A ++ H G +VYSTCS+ E
Sbjct: 463 --DASVKTNKT--EADFMKLPHLQKQLLLAAID--SVNHHSKTGGY--IVYSTCSVTVEE 514
Query: 285 NEDVIKSVL 293
NE V++ L
Sbjct: 515 NEQVVQYAL 523
>gi|15615070|ref|NP_243373.1| hypothetical protein BH2507 [Bacillus halodurans C-125]
gi|10175127|dbj|BAB06226.1| BH2507 [Bacillus halodurans C-125]
Length = 450
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 134/275 (48%), Gaps = 20/275 (7%)
Query: 33 AIQLALAQLLVRNKVKSI--EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV 90
A++ + + LV+ + E+ +++ + +P RVN K V+ A+ L + V
Sbjct: 146 AVEYSYPEWLVKRWIDQYGEEETVSICEEMLLPPKVTARVNVRKRTVEEALERLEHEGVQ 205
Query: 91 QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGN 150
+ ++ D I+ + L +G + +Q ++S +VA A+AP+PG ++LDAC+APG
Sbjct: 206 ATNGVLSDDAIVVDKGTITSTRLFQDGELTIQDESSMLVARAVAPRPGERILDACAAPGG 265
Query: 151 KTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP----A 206
K+ H+A M G+G IV+ ++++ +V+ +++ K G NI+ LD + A
Sbjct: 266 KSTHMAERMDGEGTIVSLDMHRHKVKLIEEQAKRLGLDNIKA-----QTLDARKAREVFA 320
Query: 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
IL+D CSG G + D + A +L+ LS+ K L
Sbjct: 321 DEPFDRILVDAPCSGLGVIRRKPDIKWTKREADMKA--IRNVQLDILSSVAK------LV 372
Query: 267 FPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF 301
PG ++YSTC+I Q+ENE VI + F
Sbjct: 373 KPG-GLLIYSTCTIDQLENEQVIAEFMEAHGEFSI 406
>gi|451854377|gb|EMD67670.1| hypothetical protein COCSADRAFT_34463 [Cochliobolus sativus ND90Pr]
Length = 728
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 85/249 (34%), Positives = 122/249 (48%), Gaps = 19/249 (7%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFV-VQKDDLVPDLLILPPGCD 107
+ A ++ + P+P +R NTL+ D+ A++ G Q V K V L I
Sbjct: 287 EAQAFFEANETPRPIVIRTNTLRTHRRDLAQALINRGVQLEPVGKWSKV-GLQIFDAQVP 345
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
L P + G LQ +S + ALAP+ +VLD +APG KT HLAALMK G I A
Sbjct: 346 LGATPEYLAGHYILQAASSFLPVMALAPQENERVLDMAAAPGGKTTHLAALMKNTGCIFA 405
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+ NK+R + L I GA N+ V H L P+ S +LLD CSG+G A+
Sbjct: 406 NDANKDRAKGLIGNIHRLGARNVIVSHYSALEF-PR--VMSGFDRVLLDAPCSGTGVIAK 462
Query: 228 RLDHLLPSHASGHTADPTEMERLNK---LSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
D + ++ + AD ++ L K L+A ++ H G +VYSTCS+ E
Sbjct: 463 --DASVKTNKT--EADFMKLPHLQKQLLLAAID--SVNHHSKTGGY--IVYSTCSVTVEE 514
Query: 285 NEDVIKSVL 293
NE V++ L
Sbjct: 515 NEQVVQYAL 523
>gi|212223580|ref|YP_002306816.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus onnurineus NA1]
gi|212008537|gb|ACJ15919.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus onnurineus NA1]
Length = 371
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 120/247 (48%), Gaps = 18/247 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E +A+ + + P PR RVNTL++++ + L K+ F ++ + L +
Sbjct: 86 ERALAIAEAMEKPLPRCFRVNTLRVEIPTLTKLLNKKGFQFRRVPWAREGFCLTREPFSI 145
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P ++G +++Q +S AL PKPG V D +APG KT +LA LMK +G I A
Sbjct: 146 TSTPEYLSGLLYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMKNEGIIYAF 205
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ +ER++ + + G N ++H L++ E ILLD C+GSGT
Sbjct: 206 DVGEERLKETRLNLSRLGITNTILIHKSSLHMGELG---IEFDKILLDAPCTGSGTI--- 259
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENE 286
H P S T ME + Q + ++ AL PG +VYSTCS+ ENE
Sbjct: 260 --HKNPERKSNRT-----MEDIKFCQGLQMQMIKVALENLKPG-GILVYSTCSLEPEENE 311
Query: 287 DVIKSVL 293
VI+ L
Sbjct: 312 FVIQWTL 318
>gi|448562423|ref|ZP_21635381.1| tRNA and rRNA cytosine-C5-methylase [Haloferax prahovense DSM
18310]
gi|445718741|gb|ELZ70425.1| tRNA and rRNA cytosine-C5-methylase [Haloferax prahovense DSM
18310]
Length = 313
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 22/255 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFAACERPLPSVVRVNTIKTTVTRAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG +V D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD---------PKDPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPFGERTPEKSGSFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278
S GT + D L D M + ++ QK LR A+ VVYSTC
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVKSVAGIQKGILRRAVQVTKAGGTVVYSTC 239
Query: 279 SIHQVENEDVIKSVL 293
+ ENE ++ VL
Sbjct: 240 TFAPEENEAILDFVL 254
>gi|163119428|ref|YP_078968.2| rRNA SAM-dependent methyltransferase RmsB [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|404489065|ref|YP_006713171.1| 16S rRNA methyltransferase B [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|423682119|ref|ZP_17656958.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus licheniformis
WX-02]
gi|52348056|gb|AAU40690.1| rRNA large subunit methyltransferase B [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|145902935|gb|AAU23330.2| rRNA SAM-dependent methyltransferase RmsB [Bacillus licheniformis
DSM 13 = ATCC 14580]
gi|383438893|gb|EID46668.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus licheniformis
WX-02]
Length = 448
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 133/283 (46%), Gaps = 25/283 (8%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN LK D D+ + L + + ++ DL D + L G + P G V
Sbjct: 175 IPPKQTIRVNRLKNDRDTLLSRLNEAGIEAEEGDLSKDAVKLLKGT-IASTPFFKEGEVT 233
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL P+ G VLDAC+APG K+ H+ L++ GK+V+ +L++ +V+ +K+
Sbjct: 234 IQDESSMLVARALGPERGETVLDACAAPGGKSTHIGELLEDTGKVVSLDLHQHKVKLIKE 293
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAY----SEVRAILLDPSCSGSGTAAERLDHLLPSH 236
G +NIE LD + + IL+D CSG G + D
Sbjct: 294 AAGRIGLSNIEA-----RALDARKAGEVFEPEQFDRILVDAPCSGFGVIRRKPD------ 342
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
++ P + RL + + L G +VYSTC++ ENE V+ + L
Sbjct: 343 -LKYSKTPEDSARLAGIQLAILNEIAPLLKTGGT--LVYSTCTMDPTENEQVMHAFLEEH 399
Query: 297 MSFGFQ--LATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337
F LA P +A+ ++K SI P + T F+
Sbjct: 400 DEFEADPTLAERLPE---KAAPYVKDGSIQILPHYFGTDGFFI 439
>gi|345867157|ref|ZP_08819174.1| NOL1/NOP2/sun family protein [Bizionia argentinensis JUB59]
gi|344048371|gb|EGV43978.1| NOL1/NOP2/sun family protein [Bizionia argentinensis JUB59]
Length = 403
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 122/258 (47%), Gaps = 28/258 (10%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTL-----KMDVDSAVLELGKQFVVQKDDLVPDLLILPPG 105
+++ AL Q DV +RVNTL K+ + LE +F+ P+ L L
Sbjct: 141 KEIAALNQQADV----VLRVNTLQTTKEKLQAELFDLEFETEFIQG----YPNALKLKER 192
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
++ NG +Q +S +VA L +PG +V+D C+ G KT+HLA+LM+ KG+I
Sbjct: 193 ANVFTTDAFKNGHFEVQDASSQLVAEFLNVEPGMRVVDTCAGAGGKTLHLASLMENKGQI 252
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+A ++ ++ LK K +GA NIE H D + K Y + +L+D CSG G
Sbjct: 253 IALDIYANKLNELKRRAKRNGAHNIEPRHIDSTKVIKK--LYDKADRVLIDAPCSGLGVL 310
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
D E E L K+ Q++ L+ PG + +VY+TCSI
Sbjct: 311 RRNPDAKW----------KLEPEFLEKIKKTQQEILQSYARIVKPGGQ-MVYATCSILPS 359
Query: 284 ENEDVIKSVLPIAMSFGF 301
EN++ + + L M F
Sbjct: 360 ENQNQVDTFLASDMGKDF 377
>gi|406990718|gb|EKE10348.1| hypothetical protein ACD_16C00051G0004 [uncultured bacterium]
Length = 427
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 84/271 (30%), Positives = 127/271 (46%), Gaps = 26/271 (9%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +R N LK + + L V+K L P L L ++ G V +Q
Sbjct: 166 PLDLRTNLLKTTREEVLKALSTAGLKVEKTPLSPWGLRLHGRENITQTQAFQKGLVEVQD 225
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
+ S ++A +APK G VLD C+ G KT+ LAAL+ KG++VA + R++R K+ +K
Sbjct: 226 EGSQLIAGLIAPKAGQTVLDLCAGAGGKTLALAALLDNKGRLVATDTALWRLKRTKERLK 285
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
+G N+E+ + +L+D CSGSGT D T
Sbjct: 286 RAGVFNVEIREISGMTDKWLKRQKERFDHVLVDAPCSGSGTWRRNPDK-------KWTLT 338
Query: 244 PTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG- 300
P + L++LSA Q+ L A L PG +VY+TCS+ ENEDV+ + L +F
Sbjct: 339 PKD---LSELSALQQVLLAGAAPLVKPGGS-LVYATCSLFYEENEDVVATFLKDHPTFKV 394
Query: 301 ---------FQLATPFPNGTAE--ASQFLKA 320
F +PF +GT A++F+K+
Sbjct: 395 IPCGLKGERFLFLSPFQHGTDGFFAAKFIKS 425
>gi|448362080|ref|ZP_21550693.1| RNA methylase [Natrialba asiatica DSM 12278]
gi|445649760|gb|ELZ02697.1| RNA methylase [Natrialba asiatica DSM 12278]
Length = 302
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 78/252 (30%), Positives = 114/252 (45%), Gaps = 25/252 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
I+D A + P VRVNT+K V+ A L + V + D P +L L PG
Sbjct: 11 IDDFEAFLAACEQPLGNAVRVNTIKASVERATTALDEDGVAYDQADWNPRVLRLETNSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K +AALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPIVLDPRPGDRVWDCCAAPGGKATQIAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT- 224
VA + N R+ L+ + GA ++ V + D N + + E L+D CS GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATSLAVTNDDARNYSLQRFPFDEFDRALVDAPCSCEGTI 186
Query: 225 --AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIH 281
+ LD+ P H +N ++ QK LR AL + VVYSTC+
Sbjct: 187 RKNPDALDNWSPDH-------------INSVAGIQKGILRRALQATREGGTVVYSTCTFA 233
Query: 282 QVENEDVIKSVL 293
ENE V++ L
Sbjct: 234 PEENEAVVQHAL 245
>gi|403378883|ref|ZP_10920940.1| 16S rRNA methyltransferase B [Paenibacillus sp. JC66]
Length = 457
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/178 (33%), Positives = 96/178 (53%), Gaps = 10/178 (5%)
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 175
G +Q ++S +V A+ P+PG VLD C+APG KT H+A LM +G ++ C++++ +
Sbjct: 240 EGLFTIQDESSMLVGEAVDPRPGMSVLDCCAAPGGKTTHMAELMNDQGMVIGCDIHEHKE 299
Query: 176 RRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
++ + G +I+ L D L + PA S R +LLD CSG G + D
Sbjct: 300 ALIRKQAQRLGLTSIQTLAADARTLSGRFPAESFDR-VLLDAPCSGLGVIRRKPD----- 353
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+P E++ L+++ A +A+ H L PG +VYSTC+I ENE+ I+ L
Sbjct: 354 --LKWAKEPNEVKALSRIQAELLEAV-HPLVKPG-GLLVYSTCTIAAEENEEQIRRFL 407
>gi|354582479|ref|ZP_09001381.1| sun protein [Paenibacillus lactis 154]
gi|353199878|gb|EHB65340.1| sun protein [Paenibacillus lactis 154]
Length = 454
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 75/247 (30%), Positives = 120/247 (48%), Gaps = 17/247 (6%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLH 109
E A+ + P VRVNT + + + E+ G L P +++ ++
Sbjct: 173 ETAEAICSANNEPPAVSVRVNTTMISREEMLKEMEGHGLQAAPSSLSPYGIVVKGAGNMA 232
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
+ G + +Q ++S +VA A+ P+PG +VLD C+APG K+ H+ LMK +G IVA +
Sbjct: 233 LTDWYREGMISIQDESSMLVAEAVGPEPGMRVLDCCAAPGGKSAHMGELMKDEGSIVAND 292
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAILLDPSCSGSGTAAER 228
++ + + + D G I + GD + L + +PA + ILLD CSG G +
Sbjct: 293 IHSHKGKLIADQAARLGLDCIRTVTGDAIELPARFEPASFD--RILLDAPCSGLGVIRRK 350
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALR--HALSFPGVERVVYSTCSIHQVENE 286
P G T E + +++A Q + L AL PG +VYSTC+I ENE
Sbjct: 351 -----PDLKWGKTE-----EDIREIAALQSRLLDSVSALLRPG-GVLVYSTCTIEPQENE 399
Query: 287 DVIKSVL 293
V+ S +
Sbjct: 400 GVVTSFV 406
>gi|392513053|emb|CAD24979.2| NUCLEOLAR PROTEIN (NOL1/NOP2 family) [Encephalitozoon cuniculi
GB-M1]
Length = 306
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 22/248 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLV---PDLLILPPGCD 107
+++ A + + +P +R+NTL + VL+L V D L ++
Sbjct: 19 KEVEAFIEESEKQRPMTIRINTL-LKGRKDVLKLLSGRGVDLDALSWTDSGCVVFKSSVP 77
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ P + G LQG AS + + K G V+D C+APG KT H+AALM+ G I A
Sbjct: 78 IGATPEYLAGYYCLQGAASMLPVLNMDLKEGLTVVDLCAAPGGKTTHIAALMENTGVIYA 137
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
++N+ER+ LK I+ G N V +N+D + V +LLD CSG+G ++
Sbjct: 138 NDVNEERIAGLKSNIQRMGVRNCIV-----MNMDGRKVNVGRVDRVLLDAPCSGTGVISK 192
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVEN 285
PS + T +E++R+ L QK+ + H PG ++YSTCS+ EN
Sbjct: 193 D-----PSVKTSRTR--SEIDRMVTL---QKELILHGFGMLKPG-GILMYSTCSVLVKEN 241
Query: 286 EDVIKSVL 293
E+V+ +L
Sbjct: 242 EEVVNYLL 249
>gi|396080811|gb|AFN82432.1| NOL1/NOL2/sun tRNA/rRNA cytosine-C5-methylase [Encephalitozoon
romaleae SJ-2008]
Length = 306
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 117/236 (49%), Gaps = 24/236 (10%)
Query: 64 KPRYVRVNTL-KMDVDSAVLELGKQFVVQKDDLV---PDLLILPPGCDLHVHPLIVNGCV 119
+P +R+NTL K D + L G+ V DDL ++ + P + G
Sbjct: 32 RPTTIRINTLLKHRKDVSKLLRGRG--VDLDDLSWTDSGCVVFKSSVPIGATPEYLAGYY 89
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
LQG AS + + K G V+D C+APG KT H+AALM+ G I A ++N++R+ LK
Sbjct: 90 CLQGAASMLPVLNMELKEGLTVVDLCAAPGGKTTHIAALMENTGIIYANDVNEDRMAGLK 149
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
I+ G N V +N+D + +V +LLD CSG+G ++ PS +
Sbjct: 150 SNIQRMGVRNCIV-----MNMDGRKVNVGKVDRVLLDAPCSGTGVISKD-----PSVKTT 199
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
T +++++ QK+ + H PG ++YSTCS+ ENE+V+ +L
Sbjct: 200 RTR-----SEIDRMATLQKELILHGFEMLRPG-GILMYSTCSVLVKENEEVVNYLL 249
>gi|333370272|ref|ZP_08462285.1| NOL1/NOP2/sun family protein [Desmospora sp. 8437]
gi|332978163|gb|EGK14897.1| NOL1/NOP2/sun family protein [Desmospora sp. 8437]
Length = 459
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 82/255 (32%), Positives = 120/255 (47%), Gaps = 36/255 (14%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
E+ +T D P R +R+NTLK+ V G+Q +P L P CD
Sbjct: 18 EEYPVFIRTYDDPPHRGLRINTLKLSVAE-----GRQ-------RLPFRLEPVPWCDTGF 65
Query: 111 -----------HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM 159
H G ++Q ++ AL P+PG K+LD C+APG KT +AA M
Sbjct: 66 FYDHDRDRPGKHVYHAAGLYYIQDPSAMAPVEALQPRPGEKILDLCAAPGGKTTQIAAHM 125
Query: 160 KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219
KGKG +VA E++KER + L + ++ G N +L D +L + + + +L+D C
Sbjct: 126 KGKGILVANEISKERRKTLVENLERCGVPNALILGEDPRHLSTRFTGWFD--RVLIDAPC 183
Query: 220 SGSGTAAERLD-HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTC 278
SG G + D SH S TE +LS + A + PG R+VYSTC
Sbjct: 184 SGEGMFRKDPDTRERWSHRS------TEAAAELQLSILEAAA---PMLRPG-GRLVYSTC 233
Query: 279 SIHQVENEDVIKSVL 293
+ + ENE V++ L
Sbjct: 234 TFNPRENEGVLQRFL 248
>gi|305664185|ref|YP_003860473.1| RNA methylase [Ignisphaera aggregans DSM 17230]
gi|304378754|gb|ADM28593.1| RNA methylase, NOL1/NOP2/sun family [Ignisphaera aggregans DSM
17230]
Length = 455
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 126/257 (49%), Gaps = 27/257 (10%)
Query: 46 KVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPP 104
K+ I++ ++ + + P +RVN LK VD + L + + + V ++
Sbjct: 173 KLVGIDEAKSILREFNSRYPISIRVNILKCSVDEVLNVLRSEGINAEIGKYVKTVIKFKG 232
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
D L G + +Q +AS++ + L PKPG V+D C+APG KT H+ LM G
Sbjct: 233 PYDFDRSSLYREGKIVIQDEASALASILLDPKPGEVVIDLCAAPGGKTEHMGELMNNTGI 292
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGD------FLNLDPKDPAYSEVRAILLDPS 218
I A +++K R++R+++ + G + +++ + D L + D +L+D
Sbjct: 293 IYAFDIDKTRIKRMQEILNRCGISIVKIFNEDARKATEILGRNIADK-------VLVDAP 345
Query: 219 CSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYS 276
C+ SGT + + TE E +NK + Q + L A+ PG +++Y+
Sbjct: 346 CTSSGTIMKNQE---------LRWRITEDE-VNKAAKLQYELLETAIELVKPG-GKILYT 394
Query: 277 TCSIHQVENEDVIKSVL 293
TCS+ + ENEDVI+ VL
Sbjct: 395 TCSLFREENEDVIEKVL 411
>gi|88802791|ref|ZP_01118318.1| putative sun protein [Polaribacter irgensii 23-P]
gi|88781649|gb|EAR12827.1| putative sun protein [Polaribacter irgensii 23-P]
Length = 405
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 67/211 (31%), Positives = 108/211 (51%), Gaps = 15/211 (7%)
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
PD L+LP ++ NG +Q +S +VAA L KPG KV+D C+ G KT+HL+
Sbjct: 184 PDALVLPERANVFKTEAFHNGFFEVQDASSQLVAAYLDVKPGMKVIDTCAGAGGKTLHLS 243
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
ALM+ KG+I+A ++ + ++R+LK K + A NI++ D + P + + IL+D
Sbjct: 244 ALMENKGQIIAMDIYESKLRKLKVRAKRNKAHNIDMRVID--STKPIKKLHGKADRILID 301
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVV 274
CSG G D S P +E + K+ Q++ L+ PG ++V
Sbjct: 302 APCSGLGVLRRNPD-------SKWKLQPEFIENIKKV---QQEILQQYAPMLKPG-GKMV 350
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
Y+TCS+ EN++ ++ L F L +
Sbjct: 351 YATCSVLPSENQEQVQKFLTSEAGKQFTLVS 381
>gi|374292352|ref|YP_005039387.1| putative tRNA/rRNA cytosine-C5-methylase [Azospirillum lipoferum
4B]
gi|357424291|emb|CBS87158.1| putative tRNA/rRNA cytosine-C5-methylase [Azospirillum lipoferum
4B]
Length = 465
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 77/239 (32%), Positives = 116/239 (48%), Gaps = 16/239 (6%)
Query: 65 PRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +R+N LK + SA+ L K Q + P L + L +G V +Q
Sbjct: 164 PLDLRINPLKANQQSAIKALAKAQITAETTRWSPLGLRVKGRPPLGSVDAFKDGLVEIQD 223
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
+ S +VA A+APKPG +V+D C+ G KT+ +AALMK KG++VAC++ +R++R + +
Sbjct: 224 EGSQLVALAVAPKPGHQVVDFCAGAGGKTLAIAALMKNKGRVVACDVLDKRLKRAAERFR 283
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYS-EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+G NIE H DP + + +L+D CSG+GT D G
Sbjct: 284 RAGLHNIEA-HPLTSERDPWVKRHKRKFDRVLVDAPCSGTGTWRRNPDARWRQLGPG--- 339
Query: 243 DPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
L +L Q L A L PG R++Y+TCS+ ENE +++ L F
Sbjct: 340 -------LEQLLPLQANILDSAARLVKPG-GRLIYATCSMLHDENEAQVEAFLQTHHDF 390
>gi|366166732|ref|ZP_09466487.1| 16S rRNA methyltransferase B [Acetivibrio cellulolyticus CD2]
Length = 450
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/260 (26%), Positives = 126/260 (48%), Gaps = 19/260 (7%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLI 114
L ++ + P VRVN+LK + L K+ F + + + L + L
Sbjct: 173 LLKSNNETAPLTVRVNSLKTTREELENTLKKEGFETESAKYIENALTINNPSSLTKMEAF 232
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
V G +Q ++S MV PKPG ++D CSAPG KT H+A LM +G+I+A ++++ +
Sbjct: 233 VKGFFQVQDESSMMVGRIFDPKPGEFIVDVCSAPGGKTTHIAELMGNRGQIIARDIHEHK 292
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE-VRAILLDPSCSGSGTAAERLDHLL 233
+R + + S I+++ + + +D + ++ +L+D C+G G + D
Sbjct: 293 IRLINEA---SSRLGIDIIKAEIFDASEQDASLTDKADRVLVDAPCTGLGIIRRKPDIKW 349
Query: 234 PSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKS 291
+++ LN++ Q+K L + + PG +VYSTC+I ENE+++K
Sbjct: 350 ARNSND----------LNEIVKLQEKILNASSKYVKPG-GVLVYSTCTIEPQENEEMVKK 398
Query: 292 VLPIAMSFGFQ-LATPFPNG 310
L + + ++ P+G
Sbjct: 399 FLKDNKEYTMEDISKQLPDG 418
>gi|308159767|gb|EFO62287.1| Nucleolar protein NOP2 [Giardia lamblia P15]
Length = 502
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 87/293 (29%), Positives = 128/293 (43%), Gaps = 38/293 (12%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
D A + P+P +RVN+LK+ +L + + + +L P L I
Sbjct: 210 DFHAFITACEKPRPLTIRVNSLKV----KRRQLAQMLIARGVNLDPLGDWCKDGLQIFSS 265
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
+ P + G +Q AS + AL PKPG ++LD +APG KT HL ALM+ G
Sbjct: 266 QVPIGATPEYLRGYYMIQDAASFLPPMALNPKPGERILDMSAAPGGKTTHLGALMQDSGM 325
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I+A ++N++R+ L+ + G + D L + V LLD C+G G
Sbjct: 326 ILANDMNRDRIPALQANLARMGVTCAVISCSDARELTQCTGNFDRV---LLDAPCTGLGV 382
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF----PGVERVV-YSTCS 279
++ S + T D +++LS QK+ L HA P R+V YSTCS
Sbjct: 383 VSKD-----ASIKANRTFDD-----MHRLSHLQKELLNHAFDLLSKHPSSPRLVCYSTCS 432
Query: 280 IHQVENEDVIKSVL--------PIAMSFGFQLATPFPNGTAEASQFLKALSIY 324
+ ENE VI +L + SFG T F NG + KA Y
Sbjct: 433 VTLSENEAVIDYILHKRNVEVVDLPFSFGKPGITRF-NGMSYHPAIRKARRFY 484
>gi|20093808|ref|NP_613655.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19886728|gb|AAM01585.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 323
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/174 (36%), Positives = 90/174 (51%), Gaps = 12/174 (6%)
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G Q AS + L PKPG +VLDAC+APG KT HLA LM +G ++A +++ +R+R
Sbjct: 104 GYYVPQDAASMLPPVVLDPKPGDRVLDACAAPGGKTTHLAQLMDNEGTLIAIDVDPDRMR 163
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
LK + G AN L + L+L D E ILLD C+G GT H PS
Sbjct: 164 ALKSNLARCGVANAVALRMNALDLPSTD---WEFDRILLDAPCTGEGTI-----HKDPSR 215
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIK 290
+ + DP ++ +L A+ L GV +VYSTC+ ENE +++
Sbjct: 216 KT--SRDPEDIATCARLQRRLIDAVVDVLRPGGV--LVYSTCTFSPEENELIVQ 265
>gi|420199003|ref|ZP_14704687.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM031]
gi|394272689|gb|EJE17139.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM031]
Length = 435
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V IE + Q+ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGIEKTENIAQSFLEPVATTVRANISRGSIDSIISKLEQEGYQ 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ L +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGLPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEVYN 313
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
K Y + IL+D CSG G + P + + + L Q + L
Sbjct: 314 K--MYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKKHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|14591177|ref|NP_143253.1| proliferating-cell nucleolar protein p120 [Pyrococcus horikoshii
OT3]
gi|3257797|dbj|BAA30480.1| 315aa long hypothetical proliferating-cell nucleolar protein p120
[Pyrococcus horikoshii OT3]
Length = 315
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/235 (32%), Positives = 108/235 (45%), Gaps = 18/235 (7%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDLHVHPLIVNGCVF 120
P PR RVNTLK+ V V L K+ F ++ + L + P + G ++
Sbjct: 42 PLPRCFRVNTLKISVQDLVKRLNKKGFQFKRVPWAKEGFCLTREPFSITSTPEFLTGLIY 101
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q +S AL PKPG V D +APG KT +LA LM+ G I A ++++ R+R +
Sbjct: 102 IQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRL 161
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+ G N+ + H L++ + E ILLD C+GSGT H P
Sbjct: 162 NLSRLGVLNVILFHSSSLHIGELN---VEFDKILLDAPCTGSGTI-----HKNPERKWNR 213
Query: 241 TADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
T D + Q + L L PG +VYSTCS+ ENE VI+ L
Sbjct: 214 TMDDIKF-----CQGLQMRLLEKGLEVLKPG-GILVYSTCSLEPEENEFVIQWAL 262
>gi|350265887|ref|YP_004877194.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. spizizenii TU-B-10]
gi|349598774|gb|AEP86562.1| ribosomal RNA small subunit methyltransferase B [Bacillus subtilis
subsp. spizizenii TU-B-10]
Length = 447
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 120/240 (50%), Gaps = 26/240 (10%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + +RVN +K D + ++ + + V+ DL D + L G H G V
Sbjct: 176 IPPRQTLRVNQMKADRADLLDQMAAEGIEVENGDLAEDAVKLLKGSIAGTH-FFQTGEVS 234
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL PKPG VLDAC+APG K+ H+ LM+ KG + + +L+K +V+ +K+
Sbjct: 235 IQDESSMLVARALDPKPGETVLDACAAPGGKSAHIGELMENKGSVTSLDLHKHKVKLIKE 294
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYS----EVRAILLDPSCSGSGTAAERLDHLLPSH 236
G I D +D + + + IL+D CSG G + D
Sbjct: 295 AADRLGLTII-----DAKTMDARKAGETFENGQFDRILVDAPCSGFGVIRRKPDM----- 344
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
+T P + RL ++ Q LR P V++ +VYSTC++ + EN++VI + +
Sbjct: 345 --KYTKKPDDSARLAEI---QLSILREIA--PLVKKGGTLVYSTCTMDRTENDEVIHAFI 397
>gi|448585436|ref|ZP_21647829.1| tRNA and rRNA cytosine-C5-methylase [Haloferax gibbonsii ATCC
33959]
gi|445726136|gb|ELZ77753.1| tRNA and rRNA cytosine-C5-methylase [Haloferax gibbonsii ATCC
33959]
Length = 313
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/255 (29%), Positives = 116/255 (45%), Gaps = 22/255 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFAACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG +V D C+APG+KT +AA+M +G +V
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLVGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD---------PKDPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPFGERTPEKSGSFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278
S GT + D L D M + ++ QK LR A+ VVYSTC
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVKSVAGIQKGILRRAVQVTKAGGTVVYSTC 239
Query: 279 SIHQVENEDVIKSVL 293
+ ENE ++ VL
Sbjct: 240 TFAPEENEAILDFVL 254
>gi|448602998|ref|ZP_21656819.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sulfurifontis ATCC
BAA-897]
gi|445746194|gb|ELZ97656.1| tRNA and rRNA cytosine-C5-methylase [Haloferax sulfurifontis ATCC
BAA-897]
Length = 313
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 116/255 (45%), Gaps = 22/255 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDL 108
++D A + + P P VRVNT+K V A L + V + D P +L L
Sbjct: 11 VDDEEAFFAACERPLPSVVRVNTIKTTVARAREALDDEGVAYEPTDWHPGILKLEDSSPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG +V D C+APG+KT +AA+M +G ++
Sbjct: 71 TNWPYF-HGWLHGQEEVSALPAIALDPQPGERVWDTCAAPGSKTTQIAAMMDDEGVLIGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD---------PKDPAYSEVRAILLDPSC 219
+ N R+ L+ + G N+ V + D N K ++ + +L+D C
Sbjct: 130 DNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPYGERTPEKSESFEQFDRVLVDAPC 189
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278
S GT + D L D M + ++ QK LR A+ VVYSTC
Sbjct: 190 SCEGTCRKNPDVL----------DEWTMNHVKSVAGIQKGILRRAVQVTKAGGNVVYSTC 239
Query: 279 SIHQVENEDVIKSVL 293
+ ENE ++ VL
Sbjct: 240 TFAPEENEAILDFVL 254
>gi|319892211|ref|YP_004149086.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
pseudintermedius HKU10-03]
gi|317161907|gb|ADV05450.1| Ribosomal RNA small subunit methyltransferase B [Staphylococcus
pseudintermedius HKU10-03]
Length = 433
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 16/241 (6%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + VRVN ++ VD A+ +L + F VQ D + D+ + G + L G +
Sbjct: 172 LPGTQTVRVNRTQITVDEAIEQLRAEGFDVQSDTHI-DVCLHVSGHGVMTSELFQKGLIS 230
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q K+S VA + +PG VLD+CSAPG K H+A ++ G+G ++A +++ +++ +
Sbjct: 231 IQDKSSMFVAEYMELQPGDAVLDSCSAPGGKACHIAEILNGQGTVLATDVHAHKIQLIDH 290
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
I+ I + D P D + +V LLD CSG G + + +
Sbjct: 291 NIRKLHLTGIRAMQHDATQ--PYDQQFDKV---LLDAPCSGLGVLRHKPE-------IKY 338
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
P +++ L L + L G +VYSTC+I Q+EN++VI + L F
Sbjct: 339 VITPQDVKGLVDLQLRIIDNVSKHLKAGGT--MVYSTCTIEQLENDNVIYTFLKSHPDFE 396
Query: 301 F 301
F
Sbjct: 397 F 397
>gi|240103453|ref|YP_002959762.1| SAM-dependent tRNA/rRNA cytosine-C5 methylase [Thermococcus
gammatolerans EJ3]
gi|239911007|gb|ACS33898.1| SAM-dependent tRNA/rRNA cytosine-C5 methylase [Thermococcus
gammatolerans EJ3]
Length = 309
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 118/248 (47%), Gaps = 20/248 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E +++ + + P PR RVNTL++++ L K+ F ++ + L +
Sbjct: 24 ERALSIAEAMEKPLPRCFRVNTLRIEIPKLTKLLNKKGFQFRRIPWAREGFCLTREPFSI 83
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P ++G +++Q +S AL PKPG V D +APG KT +LA LM+ +G I A
Sbjct: 84 TSTPEYLSGLLYIQEASSMYPPVALEPKPGEVVADMAAAPGGKTSYLAQLMENEGIIYAF 143
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ +ER++ + + G N + H L +D E ILLD C+GSGT
Sbjct: 144 DVGEERLKETRLNLSRLGVTNTVLFHRSSLYIDELG---VEFDKILLDAPCTGSGTI--- 197
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVEN 285
H P + T +E + Q K L LS G+ +VYSTCS+ EN
Sbjct: 198 --HKNPERKANRT-----IEDVKFCQNLQMKMLEKGLSVLRKGGI--LVYSTCSLEPEEN 248
Query: 286 EDVIKSVL 293
E VI+ VL
Sbjct: 249 EFVIQWVL 256
>gi|157692254|ref|YP_001486716.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus pumilus
SAFR-032]
gi|157681012|gb|ABV62156.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus pumilus
SAFR-032]
Length = 447
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 120/245 (48%), Gaps = 24/245 (9%)
Query: 62 VPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
VP + +RVN +K D + +L+ G + + DL D L L G + P G
Sbjct: 176 VPPKQTLRVNRIKTDRAALKQKLLDAGIE--TELGDLSEDALKLMKGSIVST-PSFQEGY 232
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
V +Q ++S +VA AL P+PG VLDAC+APG K+ H+A M +G+IV+ +L++ +V+ +
Sbjct: 233 VTIQDESSMLVARALDPQPGETVLDACAAPGGKSTHIAERMNDEGQIVSLDLHEHKVKLI 292
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSH 236
K K N+ + L+ YSE IL+D CSG G + D
Sbjct: 293 KQAAK---RLNLTQIEAKALDARKAKDDYSEASFDRILIDAPCSGFGVIRRKPDM----- 344
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLP 294
+T P + R L+ Q+ L+ L PG +VYSTC++ EN+ VI + L
Sbjct: 345 --KYTKSPEDSAR---LAIIQQAILKETAPLLKPG-GTLVYSTCTMDPSENQQVIHAFLQ 398
Query: 295 IAMSF 299
F
Sbjct: 399 EHQDF 403
>gi|420163445|ref|ZP_14670192.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM095]
gi|420167574|ref|ZP_14674226.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM087]
gi|394235134|gb|EJD80708.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM095]
gi|394237602|gb|EJD83088.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM087]
Length = 435
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVATTVRANISRASIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------YC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNINAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q K L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLKILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNLATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|168186789|ref|ZP_02621424.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum C str. Eklund]
gi|169295225|gb|EDS77358.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum C str. Eklund]
Length = 443
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 74/256 (28%), Positives = 129/256 (50%), Gaps = 20/256 (7%)
Query: 38 LAQLLVRNKVKSI-EDLM-ALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDD 94
L +L++ I ED++ L + P V VRVN LK D D A L + V++
Sbjct: 153 LVNMLIKQYGNEIAEDILKGLNERPAVT----VRVNNLKTDYDEAFKNLEDYGYDVEEGY 208
Query: 95 LVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVH 154
+ P+ +++ G + +PL G + +Q +++ +VA ++ K G VLD CSAPG KT H
Sbjct: 209 ICPEAIVINKGKSIEKNPLFKEGKITVQDESAMLVAPSIDAKEGATVLDLCSAPGGKTTH 268
Query: 155 LAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214
++ +M G + A +++ ++ +K+ K G NI D + + +++ +L
Sbjct: 269 ISEIMNNTGIVKAFDIHDNKISLVKENAKRLGINNIACAEMDACKFNKELENSADM--VL 326
Query: 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RV 273
+D CSG G ++ P +T D ++ + A QKK + +A + E +
Sbjct: 327 IDVPCSGLGIIRKK-----PEIK--YTKD---VKSTKDIVAIQKKIMENAAKYVRKEGTL 376
Query: 274 VYSTCSIHQVENEDVI 289
VYSTC+I++ ENE I
Sbjct: 377 VYSTCTINKDENEKNI 392
>gi|449329777|gb|AGE96046.1| nucleolar protein [Encephalitozoon cuniculi]
Length = 370
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 22/248 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLV---PDLLILPPGCD 107
+++ A + + +P +R+NTL + VL+L V D L ++
Sbjct: 83 KEVEAFIEESEKQRPMTIRINTL-LKGRKDVLKLLSGRGVDLDALSWTDSGCVVFKSSVP 141
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ P + G LQG AS + + K G V+D C+APG KT H+AALM+ G I A
Sbjct: 142 IGATPEYLAGYYCLQGAASMLPVLNMDLKEGLTVVDLCAAPGGKTTHIAALMENTGVIYA 201
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
++N+ER+ LK I+ G N V +N+D + V +LLD CSG+G ++
Sbjct: 202 NDVNEERIAGLKSNIQRMGVRNCIV-----MNMDGRKVNVGRVDRVLLDAPCSGTGVISK 256
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVEN 285
PS + T +E++R+ L QK+ + H PG ++YSTCS+ EN
Sbjct: 257 D-----PSVKTSRTR--SEIDRMVTL---QKELILHGFGMLKPG-GILMYSTCSVLVKEN 305
Query: 286 EDVIKSVL 293
E+V+ +L
Sbjct: 306 EEVVNYLL 313
>gi|398818322|ref|ZP_10576914.1| ribosomal RNA small subunit methyltransferase RsmB [Brevibacillus
sp. BC25]
gi|398028090|gb|EJL21614.1| ribosomal RNA small subunit methyltransferase RsmB [Brevibacillus
sp. BC25]
Length = 448
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/264 (29%), Positives = 127/264 (48%), Gaps = 17/264 (6%)
Query: 33 AIQLALA----QLLVRN--KVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK 86
A+Q+A+A + LVR V E +A+ + + VRVN K D + +L +
Sbjct: 141 ALQIAVAYSHPEWLVRQWLAVYGEETTIAICEANNRTPHSSVRVNASKTTKDQLLDKLAE 200
Query: 87 QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACS 146
+ + + V IL G L G +Q ++S +VA ALA +PG +VLDAC+
Sbjct: 201 EGLEGQASTVSPHAILMEGGHAAGSRLFKEGYFTIQDESSMLVAPALAAEPGMRVLDACA 260
Query: 147 APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 206
APG KT H+A +M +G+I+A +++ + + K G IE + D L+L + A
Sbjct: 261 APGGKTTHIAEMMGNRGQIIASDVHAHKRDLIASAAKRLGITIIEPIVSDALDL--PEQA 318
Query: 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
ILLD C+G G + D P ++ + +L K L L+
Sbjct: 319 LGTFDRILLDAPCTGFGVIRRKPD-------LKWNKTPEDVRAIAQLQYELLKTLASMLA 371
Query: 267 FPGVERVVYSTCSIHQVENEDVIK 290
GV +VYSTC+I EN+++++
Sbjct: 372 QGGV--MVYSTCTIEPAENQEIVR 393
>gi|85691089|ref|XP_965944.1| nucleolar protein [Encephalitozoon cuniculi GB-M1]
Length = 370
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 122/248 (49%), Gaps = 22/248 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLV---PDLLILPPGCD 107
+++ A + + +P +R+NTL + VL+L V D L ++
Sbjct: 83 KEVEAFIEESEKQRPMTIRINTL-LKGRKDVLKLLSGRGVDLDALSWTDSGCVVFKSSVP 141
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ P + G LQG AS + + K G V+D C+APG KT H+AALM+ G I A
Sbjct: 142 IGATPEYLAGYYCLQGAASMLPVLNMDLKEGLTVVDLCAAPGGKTTHIAALMENTGVIYA 201
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
++N+ER+ LK I+ G N V +N+D + V +LLD CSG+G ++
Sbjct: 202 NDVNEERIAGLKSNIQRMGVRNCIV-----MNMDGRKVNVGRVDRVLLDAPCSGTGVISK 256
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVEN 285
PS + T +E++R+ L QK+ + H PG ++YSTCS+ EN
Sbjct: 257 D-----PSVKTSRTR--SEIDRMVTL---QKELILHGFGMLKPG-GILMYSTCSVLVKEN 305
Query: 286 EDVIKSVL 293
E+V+ +L
Sbjct: 306 EEVVNYLL 313
>gi|448706048|ref|ZP_21700892.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma
nitratireducens JCM 10879]
gi|445794990|gb|EMA45527.1| RNA methylase, NOL1/NOP2/sun family protein [Halobiforma
nitratireducens JCM 10879]
Length = 302
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 116/251 (46%), Gaps = 23/251 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
++D A P VR+NT+K V+ A L ++ V + D P +L L PG
Sbjct: 11 VDDFEAFLAACRRPLGNAVRINTIKASVERATAALEEESVAYDQADWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V DAC+APG K L+ALM +G +
Sbjct: 71 STWASFHGFTHG----QEEVSAVPPVVLDPEPGERVWDACAAPGGKATQLSALMNDEGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA N+ V + D N + + L+D CS GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATNLAVTNADARNYSLQRFEFDAFDRTLVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP---GVERVVYSTCSIHQ 282
+ D L D +E + L +S QK LR A+ G VVYSTC+
Sbjct: 187 RKNPDAL---------EDWSE-DHLASVSGIQKGILRRAVQATREGGT--VVYSTCTFAP 234
Query: 283 VENEDVIKSVL 293
ENE+V++ VL
Sbjct: 235 EENEEVVQHVL 245
>gi|418411636|ref|ZP_12984903.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis BVS058A4]
gi|410892362|gb|EKS40156.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis BVS058A4]
Length = 435
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 90/302 (29%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVATTVRANISRASIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNINAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q K L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLKILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNLATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|170572735|ref|XP_001892215.1| Hypothetical 56.2 kDa protein in UME3-HDA1 intergenic region,
putative [Brugia malayi]
gi|158602595|gb|EDP38966.1| Hypothetical 56.2 kDa protein in UME3-HDA1 intergenic region,
putative [Brugia malayi]
Length = 201
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 55/150 (36%), Positives = 81/150 (54%), Gaps = 8/150 (5%)
Query: 117 GCVFLQGKA----SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
GCV Q S + L PK G + D C+APG KT HLAAL++ KGKI A +
Sbjct: 7 GCVAQQSTVIQNPSCLPGLVLNPKAGXCIFDICAAPGMKTTHLAALVQNKGKIWAIDKAS 66
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
+R++ L+ ++ +GA N+ GDFL D + +++VR LLDP CSGSG +R+D L
Sbjct: 67 DRIKTLQVMVEKAGAINVSTCCGDFLRTDVTNDRFNKVRYALLDPPCSGSGI-VKRMDQL 125
Query: 233 LPSHASGHTADPTEMERLNKLSAFQKKALR 262
+ +T + L+ L ++LR
Sbjct: 126 IDEEERVNT---NRLRSLSNLQILNDESLR 152
>gi|340616103|ref|YP_004734556.1| ribosomal RNA small subunit methyltransferase B [Zobellia
galactanivorans]
gi|339730900|emb|CAZ94164.1| Ribosomal RNA small subunit methyltransferase B [Zobellia
galactanivorans]
Length = 403
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 124/258 (48%), Gaps = 24/258 (9%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDS---AVLELGKQFVVQKDDLVPDLLILPPGCD 107
E+ AL Q +V +R NTLK ++ A+L+ G V + D L LP +
Sbjct: 141 EESAALNQQAEV----ILRTNTLKTKKETLRKALLDEG--IVAEPIKGYADALRLPERAN 194
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ V G +Q +S +VAA L KPG +V+D C+ G K++HLAALM+ KG+++A
Sbjct: 195 VFVTESFKKGYFEVQDASSQLVAAYLDVKPGQRVVDTCAGAGGKSLHLAALMENKGQLIA 254
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
++ +++ LK + + A NIE D + K Y +L+D C+G G
Sbjct: 255 MDIYGSKLKELKRRARRNNAHNIETREIDSTKVYKK--LYGSADRVLIDAPCTGLGVLRR 312
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRH--ALSFPGVERVVYSTCSIHQVEN 285
D S P E L K++ Q + +R+ + PG ++VY+TCSI EN
Sbjct: 313 NPD-------SKWKMQP---EFLEKITKTQHEIIRNYSKIVKPG-GKMVYATCSILPQEN 361
Query: 286 EDVIKSVLPIAMSFGFQL 303
D ++S L F L
Sbjct: 362 NDQVQSFLASEEGKDFSL 379
>gi|261405800|ref|YP_003242041.1| sun protein [Paenibacillus sp. Y412MC10]
gi|261282263|gb|ACX64234.1| sun protein [Paenibacillus sp. Y412MC10]
Length = 442
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/278 (28%), Positives = 134/278 (48%), Gaps = 25/278 (8%)
Query: 22 DAEKFLMLHKGAIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDS 79
DA++ +LH + Q LV + E A+ + P VRVNT + D
Sbjct: 132 DAQRISLLH------SHPQWLVERWISQYGTEATEAICAANNEPPAVSVRVNTTMISRDD 185
Query: 80 AVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPG 138
+ +G + + P +++ ++ + G + +Q ++S +VA A+ P+PG
Sbjct: 186 MLKLMGNHGLDASPSSVSPYGIVVKGAGNMALTDWYREGMISIQDESSMLVAEAVQPEPG 245
Query: 139 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198
+VLD C+APG K+ H+ LM +G IVA +++ + + + D G +I ++ GD L
Sbjct: 246 MRVLDCCAAPGGKSAHMGELMNDEGSIVANDIHAHKGKLISDQASRLGLDSISIVTGDAL 305
Query: 199 NL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQ 257
+L D +PA + ILLD CSG G + P G + E +++++A Q
Sbjct: 306 DLADRFEPASFD--RILLDAPCSGLGVIRRK-----PDLKWGKS-----QEDIHEIAALQ 353
Query: 258 KKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+ L + PG +VYSTC+I ENE V+ + L
Sbjct: 354 LRLLESVSTLLRPG-GILVYSTCTIEPRENEGVVSAFL 390
>gi|254415201|ref|ZP_05028963.1| ribosomal RNA small subunit methyltransferase B [Coleofasciculus
chthonoplastes PCC 7420]
gi|196178007|gb|EDX73009.1| ribosomal RNA small subunit methyltransferase B [Coleofasciculus
chthonoplastes PCC 7420]
Length = 448
Score = 94.7 bits (234), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 134/293 (45%), Gaps = 27/293 (9%)
Query: 34 IQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQK 92
I+L L QL IE+ AL Q + P +R+N L +D+ + + VQ+
Sbjct: 159 IELWLNQL-------GIEETEALCQWFNQPPTIDLRINPLNASIDTVETAMQAAGIQVQR 211
Query: 93 DDLVPDLLILPPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNK 151
+P L + P G +Q ++ +V+ L P+P ++DAC+APG K
Sbjct: 212 LPHLPQALRFQGSTGSIQTLPGFNEGWWTIQDSSAQLVSHLLNPQPHDVIIDACAAPGGK 271
Query: 152 TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE-V 210
T HLA LM+ +G I AC+ R++++K + +I++ GD + P +++
Sbjct: 272 TTHLAELMRDRGTIWACDKAASRLKKVKANTQRLQLQSIQICPGDSRDF----PQFTQKA 327
Query: 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--P 268
+LLD CSG GT R D + R+ +LS Q + L ++ P
Sbjct: 328 DTVLLDAPCSGLGTLHRRPDIRWRCTPA----------RVQELSVLQSELLTQTATWVKP 377
Query: 269 GVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKAL 321
G +VY+TC++H ENE VI++ L + + P + +LK L
Sbjct: 378 G-GVLVYATCTLHPQENEAVIQAFLERHLHWCIDAPPPTLTAFSTPQGWLKVL 429
>gi|357495101|ref|XP_003617839.1| Ribosomal RNA small subunit methyltransferase [Medicago truncatula]
gi|355519174|gb|AET00798.1| Ribosomal RNA small subunit methyltransferase [Medicago truncatula]
Length = 654
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 85/291 (29%), Positives = 133/291 (45%), Gaps = 38/291 (13%)
Query: 8 GLHTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRY 67
L T HP+W V K+L Q +L++ N ++ P Y
Sbjct: 225 ALATLYSHPVWIVRRWTKYLG------QEEAIKLMIWNNIE----------------PSY 262
Query: 68 -VRVNTLK-MDVDSAVLELGKQFVVQKDDL-VPDLLILPPGCDLHVHP-LIVNGCVFLQG 123
+R N K D V EL V K L + D + + G + +H L G +Q
Sbjct: 263 SLRANRAKGFSRDDLVTELNALKVPHKLSLHLDDFVRIKTGLQIIIHAGLFKEGLCSVQD 322
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
+++ ++ + + P+PG ++D C+APG KT+++AA + G+G + A ++N R+R LK+T K
Sbjct: 323 ESAGLIVSIVDPQPGETIVDCCAAPGGKTLYMAAHLSGQGMVYAVDVNSGRLRILKETAK 382
Query: 184 LSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
L + +H D L +P S +LLD CSG G ++R D
Sbjct: 383 LHQVDGVVTTVHADLRTLTDGEPLKSN--KVLLDAPCSGLGVLSKRADLRWNRKLE---- 436
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ME+L KL A + GV +VYSTCSI EN+D + + L
Sbjct: 437 ---DMEQLKKLQDELLDAASTLVKPGGV--LVYSTCSIDPEENDDRVAAFL 482
>gi|18977629|ref|NP_578986.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus furiosus DSM
3638]
gi|397651750|ref|YP_006492331.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus furiosus
COM1]
gi|18893351|gb|AAL81381.1| putative nucleolar protein III (nol1-nop2-sun family) [Pyrococcus
furiosus DSM 3638]
gi|393189341|gb|AFN04039.1| nol1-nop2-sun family nucleolar protein III [Pyrococcus furiosus
COM1]
Length = 310
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 76/236 (32%), Positives = 112/236 (47%), Gaps = 20/236 (8%)
Query: 63 PKPRYVRVNTLK---MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCV 119
P PR RVNTLK ++ +++ G QF L P + P + G +
Sbjct: 36 PLPRCFRVNTLKGTISEITKRLMKKGFQFTRVPWAREGFCLTREP-FSITSTPEYLTGLI 94
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
++Q +S AL PKPG V D +APG KT ++A LM+ KG I A ++++ER++ +
Sbjct: 95 YIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYMAQLMENKGLIFAFDVDEERLKETR 154
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+ G N ++H L +D + ++ + ILLD C+GSGT H P
Sbjct: 155 LNLSRLGVLNTILIHKSSLYIDELNMSFDK---ILLDAPCTGSGTI-----HKNPERKHN 206
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
T D + Q K + AL PG +VYSTCS+ ENE VI+ L
Sbjct: 207 RTLDDIKF-----CQGLQMKMIEKALEVLKPG-GILVYSTCSLEPEENEFVIQWAL 256
>gi|448369612|ref|ZP_21556164.1| RNA methylase [Natrialba aegyptia DSM 13077]
gi|445650787|gb|ELZ03703.1| RNA methylase [Natrialba aegyptia DSM 13077]
Length = 302
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 83/274 (30%), Positives = 119/274 (43%), Gaps = 27/274 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
I+D A + P VRVNT+K V+ L + V + D P +L L PG
Sbjct: 11 IDDFEAFLAACERPLGNAVRVNTIKASVERTTTALEEDGVAYDQADWNPRVLRLETNSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K LAALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPVVLDPQPGDRVWDCCAAPGGKATQLAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N + + E L+D CS GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATSLAVTNDDARNYSLQRFLFDEFDRALVDAPCSCEGTI 186
Query: 226 AER---LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIH 281
+ LD+ P H +N ++ QK LR AL + VVYSTC+
Sbjct: 187 RKNPDALDNWSPDH-------------INSVAGIQKGILRRALQATREGGTVVYSTCTFA 233
Query: 282 QVENEDVIKSVLPI--AMSFGFQLATPFPNGTAE 313
ENE V++ L F L + G AE
Sbjct: 234 PEENEAVVQHALETEDCRVVDFDLGLEYAPGLAE 267
>gi|448314911|ref|ZP_21504566.1| RNA methylase, NOL1/NOP2/sun family protein [Natronococcus jeotgali
DSM 18795]
gi|445612718|gb|ELY66437.1| RNA methylase, NOL1/NOP2/sun family protein [Natronococcus jeotgali
DSM 18795]
Length = 302
Score = 94.4 bits (233), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 117/251 (46%), Gaps = 23/251 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLIL---PPG 105
++D A + P VRVN +K VD A L + V ++ D P +L L PG
Sbjct: 11 VDDFEAFLAACERPLGNAVRVNAIKATVDRATAALEAEGVGYERADWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ A L P+PG +V D+C+APG K LAALM +G +
Sbjct: 71 STWSSFHGFTHG----QEEVSAVPATVLEPEPGERVWDSCAAPGGKATQLAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N + + E L+D CS GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATSLAVTNDDARNYSLERFDFEEFDRSLVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP---GVERVVYSTCSIHQ 282
+ D L + G+ L+++S QK L A+ G VVYSTC+
Sbjct: 187 RKNPD-ALDGWSEGY---------LDEVSGIQKGILGRAVQATREGGT--VVYSTCTFAP 234
Query: 283 VENEDVIKSVL 293
ENE V++ VL
Sbjct: 235 EENEAVVQHVL 245
>gi|337284479|ref|YP_004623953.1| SAM-dependent tRNA/rRNA cytosine-C5 methylase [Pyrococcus yayanosii
CH1]
gi|334900413|gb|AEH24681.1| SAM-dependent tRNA/rRNA cytosine-C5 methylase [Pyrococcus yayanosii
CH1]
Length = 309
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 113/247 (45%), Gaps = 18/247 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E + + + + P PR RVNTL++ V L K+ F ++ + L +
Sbjct: 24 ERALKIAEAMEKPLPRCFRVNTLRISVPELTKRLNKKGFQFKRVPWAREGFCLTREPFSI 83
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P ++G +++Q +S AL PKPG V D SAPG KT ++A LMK +G I A
Sbjct: 84 TSTPEYLSGLLYIQEASSMYPPVALDPKPGEVVADMASAPGGKTSYMAQLMKNEGIIYAF 143
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++ +ER++ + I G N+ + H L +D E ILLD C+GSGT
Sbjct: 144 DVGEERLKETRLNISRLGVTNVVLFHKSALYIDELG---IEFDRILLDAPCTGSGTI--- 197
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENE 286
H P D + Q + L L PG +VYSTCS+ ENE
Sbjct: 198 --HKNPERKWNRALDDIKF-----CQKLQMRLLERGLDVLKPG-GILVYSTCSLEPEENE 249
Query: 287 DVIKSVL 293
VI+ VL
Sbjct: 250 FVIQWVL 256
>gi|152976231|ref|YP_001375748.1| sun protein [Bacillus cytotoxicus NVH 391-98]
gi|152024983|gb|ABS22753.1| sun protein [Bacillus cytotoxicus NVH 391-98]
Length = 444
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 125/253 (49%), Gaps = 25/253 (9%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L ++ V ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAIDLLNQEGVEAKRGDLSDDAIQIEKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA A+ P G +LD+C+APG KT H+A ++G GK+
Sbjct: 218 NVAHTEAF-QKGFLSIQDESSMLVARAVEPSKGDMILDSCAAPGGKTTHMAERLRGTGKV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP--KDPAYSEVRAILLDPSCSGSG 223
++ +L+ +VR +K G N+E D + ++ ++ + IL+D CSG G
Sbjct: 277 MSLDLHDHKVRLIKQQANRLGLENVETKALDARKVQEHFQNESFDK---ILVDAPCSGFG 333
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA---LSFPGVERVVYSTCSI 280
+ P G +E +LS Q+ L L G R+VYSTC+I
Sbjct: 334 VIRRK-----PDIKLGKEKGDSE-----RLSTIQQTILDKVAPLLKTGG--RLVYSTCTI 381
Query: 281 HQVENEDVIKSVL 293
++ENE V+ + L
Sbjct: 382 EKIENEQVVANFL 394
>gi|334134798|ref|ZP_08508300.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
HGF7]
gi|333607642|gb|EGL18954.1| ribosomal RNA small subunit methyltransferase B [Paenibacillus sp.
HGF7]
Length = 489
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 129/278 (46%), Gaps = 25/278 (8%)
Query: 68 VRVNTLKMDVDSAV--LELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+R NT + D+ + L LG F + L P +++ G ++ + P G +Q ++
Sbjct: 222 IRANTRRQHPDALLEQLRLGG-FDAEPSALSPAGIVVSSGGNMALTPGFGQGDYSIQDES 280
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S +VA AL P+ G VLD C+APG KT H+A M G + AC+L+ + R + + +
Sbjct: 281 SMLVAEALRPEAGMTVLDCCAAPGGKTAHIAEKMDDTGTVWACDLHPHKKRLIDEQAQRL 340
Query: 186 GAANIEVLHGDFLNLDPK-DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
G ++ L D L + +PA + ILLD CSG G + D
Sbjct: 341 GLKSVHTLVKDARELAGEFEPASFD--RILLDAPCSGFGVIRRKPDLKWGKRE------- 391
Query: 245 TEMERLNKLSAFQKKALR--HALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ 302
E + ++A Q+ L H L PG +VYSTC+I + ENED + L F
Sbjct: 392 ---EDIAGIAAVQQSILEAVHGLLKPG-GVLVYSTCTIERTENEDAVARFLEAHPDF--- 444
Query: 303 LATPFP-NGTAEASQFLKALS--IYFEPIQWKTKKAFL 337
+ P P G E++ +A S I P Q+ T F+
Sbjct: 445 VLDPIPTTGWPESAPLEQAASGMISIMPDQYGTDGFFI 482
>gi|434391954|ref|YP_007126901.1| sun protein [Gloeocapsa sp. PCC 7428]
gi|428263795|gb|AFZ29741.1| sun protein [Gloeocapsa sp. PCC 7428]
Length = 446
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 86/305 (28%), Positives = 137/305 (44%), Gaps = 40/305 (13%)
Query: 19 PVGDAEKFLMLHK---GAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKM 75
P E+ +LH I++ L Q K E L A + P +R+N L+
Sbjct: 137 PAHSVERLGILHSYPDWIIEVWLKQF----GYKETEQLCAWFNQPPAID---LRINPLRA 189
Query: 76 DVD--SAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL 133
V+ + L+ + V + +L L + P G +Q ++ +V+ L
Sbjct: 190 SVEKVATALQEAEVGVTRVANLPQALRFTTSTGAIEKLPGFDAGWWTVQDSSAQLVSHIL 249
Query: 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL 193
P+PG V+DAC+APG KT H+A LM+ G I AC+ R+++L+ I +I++
Sbjct: 250 DPQPGEVVIDACAAPGGKTTHIAELMQDTGTIWACDRTVSRLKKLQQNIARLQLKSIQIC 309
Query: 194 HGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNK 252
GD NL P + + +LLD CSG GT L HA E + +
Sbjct: 310 PGDSRNL----PHFVNIADRVLLDAPCSGLGT--------LHRHADARWRQTPET--VKE 355
Query: 253 LSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL----------PIAMSFG 300
L+ Q + L H ++ PG +VY+TC+++ ENE ++++ L P A S G
Sbjct: 356 LTVLQTELLTHVSTWIKPG-GVLVYATCTLNSEENEAIVQAFLTQHPCWRIEHPAANSIG 414
Query: 301 FQLAT 305
AT
Sbjct: 415 VPYAT 419
>gi|416124380|ref|ZP_11595376.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis FRI909]
gi|319401490|gb|EFV89700.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis FRI909]
Length = 435
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 92/302 (30%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V IE + Q+ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGIEKTENIAQSFLEPIATTVRANISRGSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ L +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGLPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEVYN 313
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
K Y + IL+D CSG G + P + + + L Q + L
Sbjct: 314 K--MYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKKHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|114566754|ref|YP_753908.1| hypothetical protein Swol_1228 [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
gi|114337689|gb|ABI68537.1| conserved hypothetical protein [Syntrophomonas wolfei subsp. wolfei
str. Goettingen]
Length = 456
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 93/180 (51%), Gaps = 18/180 (10%)
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G ++Q +AS + AA L P G +VLD C G KT HLA M +G+++A E +++
Sbjct: 239 GYFYIQNEASMLAAAILNPPAGERVLDLCCGVGGKTTHLAEYMNNQGEVLAVEFYAQKLE 298
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
L+ + G ++ L D L+ K+ + R +LLD CSG G R D +
Sbjct: 299 LLRQNCQRLGLGIVKDLEKDIRTLNSKE---VKARYLLLDAPCSGWGVLNRRADARWRKN 355
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVL 293
E +N+L+ Q + + HA + VE+ ++Y+TC+I+Q ENE++I+ L
Sbjct: 356 ----------QEEINELTQLQAQFISHAATM--VEKQGYLLYATCTINQAENEEIIEGFL 403
>gi|126700200|ref|YP_001089097.1| 16S rRNA methyltransferase B [Clostridium difficile 630]
gi|115251637|emb|CAJ69470.1| Ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Clostridium
difficile 630]
Length = 441
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 117/237 (49%), Gaps = 15/237 (6%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
Y+R NTLK+ + + +L + +V K +V + + + ++ + L G +Q +
Sbjct: 179 YIRTNTLKISREELIEKLSEMGIVCLKVPMVEEAIKVEKMKNIEKNELFKAGLFTIQDIS 238
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S +V + PK G VLD CSAPG K+ HLA LM G++VA ++ + +++ + T+
Sbjct: 239 SMIVGKVINPKEGSFVLDVCSAPGGKSTHLATLMNNTGQVVARDIFEHKLKLINSTVNRL 298
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
G N+ V D +D + + S+ +L D CSG G + P
Sbjct: 299 GLKNVFVERFDASEID--ENSISKFDYVLADVPCSGFGIIRRK-----PE------IKYK 345
Query: 246 EMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGF 301
+ E L +++ QKK L +A + V +VYSTC+I VEN +++ + +F F
Sbjct: 346 KEEELKDITSIQKKILENASKYVKVGGTLVYSTCTIQDVENINIVTFFVEENHNFEF 402
>gi|255081408|ref|XP_002507926.1| predicted protein [Micromonas sp. RCC299]
gi|226523202|gb|ACO69184.1| predicted protein [Micromonas sp. RCC299]
Length = 592
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 87/272 (31%), Positives = 122/272 (44%), Gaps = 37/272 (13%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLI 101
S+ + M L + + +P +R NTLK EL + + +L P LL+
Sbjct: 184 SVAETMELLEANETQRPVTLRTNTLK----CRRRELAASLINRGVNLDPIGKWSKVGLLV 239
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ P + G LQ +S + ALAP+ G +VLD +APG KT +LAALM+
Sbjct: 240 YDSRVPIGATPEYMAGHYMLQSASSFLPCMALAPQDGERVLDVAAAPGGKTTYLAALMRN 299
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
G I A E K+R+ L ++ G N V + D L PK V +LLD CSG
Sbjct: 300 TGMIFANEFQKKRLSSLVANLQRMGCTNATVCNYDGRQL-PK--VLGHVDRVLLDAPCSG 356
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYS 276
+G A+ D + S AD +NK + QK+ L A+ VVYS
Sbjct: 357 TGVIAK--DSSV--KVSKSEAD------INKCAHLQKELLVAAIDCCDANSKTGGYVVYS 406
Query: 277 TCSIHQVENEDVIKSVL--------PIAMSFG 300
TCSI ENE V+ +L P + FG
Sbjct: 407 TCSITVEENEAVLDYILKKRDVKLVPTGLEFG 438
>gi|336173111|ref|YP_004580249.1| Fmu (Sun) domain-containing protein [Lacinutrix sp. 5H-3-7-4]
gi|334727683|gb|AEH01821.1| Fmu (Sun) domain protein [Lacinutrix sp. 5H-3-7-4]
Length = 406
Score = 94.4 bits (233), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 114/241 (47%), Gaps = 18/241 (7%)
Query: 55 ALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPL 113
AL + DV +R NTLK + EL F ++ PD L L ++
Sbjct: 145 ALNEQADV----ILRTNTLKTTKEKLKSELFDLDFDTEEIKGYPDALKLKERANVFTTDA 200
Query: 114 IVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKE 173
G +Q +S +VA L K G KV+D C+ G KT+H+AALM+ KG+++A ++ +
Sbjct: 201 FKKGWFEVQDASSQLVAEFLDVKSGMKVVDTCAGAGGKTLHIAALMENKGQVIAMDIYEN 260
Query: 174 RVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL 233
++R LK K +GA NIE+ D + P Y + +L+D CSG G D
Sbjct: 261 KLRELKRRAKRAGAHNIEMRTID--STKPIKKLYDKADRVLIDAPCSGLGVLRRNPDAKW 318
Query: 234 PSHASG-HTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292
AS T+ E L+ S K PG ++VY+TCSI EN++ +K
Sbjct: 319 KLEASFLDRIKNTQREILSSYSRMVK---------PG-GKLVYATCSILPSENQEQVKHF 368
Query: 293 L 293
L
Sbjct: 369 L 369
>gi|448323288|ref|ZP_21512751.1| RNA methylase [Natronococcus amylolyticus DSM 10524]
gi|445600099|gb|ELY54118.1| RNA methylase [Natronococcus amylolyticus DSM 10524]
Length = 302
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 116/251 (46%), Gaps = 23/251 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLIL---PPG 105
++D A + P VRVNT+K VD A L ++ V + D P +L L PG
Sbjct: 11 VDDFEAFLDACERPLGNAVRVNTIKASVDRATTVLEEEGVGYEGVDWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ A L P+PG +V D C+APG K LAALM +G +
Sbjct: 71 STWSSFHGFTHG----QEEVSAVPATVLEPEPGERVWDCCAAPGGKATQLAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N + + E L+D CS GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATSLAVTNDDARNYSLERFDFDEFDRALVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP---GVERVVYSTCSIHQ 282
+ D L + G+ L+++S QK L A+ G VVYSTC+
Sbjct: 187 RKNPD-ALDGWSEGY---------LDEVSGIQKGVLGRAVQATREGGT--VVYSTCTFAP 234
Query: 283 VENEDVIKSVL 293
ENE V++ L
Sbjct: 235 EENEAVVQHAL 245
>gi|428311848|ref|YP_007122825.1| ribosomal RNA small subunit methyltransferase RsmB [Microcoleus sp.
PCC 7113]
gi|428253460|gb|AFZ19419.1| ribosomal RNA small subunit methyltransferase RsmB [Microcoleus sp.
PCC 7113]
Length = 485
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 78/281 (27%), Positives = 134/281 (47%), Gaps = 37/281 (13%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGC-DLHVHPL 113
L QTP + +RVN +++ ++ + + V V++ +P L + G ++ P
Sbjct: 214 LNQTPTID----LRVNPMRVSIEEVEVAMQSTGVEVRRIPQLPQALRVMGGAGNIQQLPG 269
Query: 114 IVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKE 173
G +Q ++ +V+ L P+ G V+DAC+APG KT H+A LM +G I AC+
Sbjct: 270 FREGWWTVQDSSAQLVSHLLNPQAGEVVIDACAAPGGKTTHIAELMGDQGTIWACDRAAS 329
Query: 174 RVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD--- 230
R+++L++ + +I++ GD + + + V LLD CSG GT R D
Sbjct: 330 RLKKLQENTQRLQLQSIQICTGDSRHFSQFTDSANRV---LLDAPCSGLGTLHRRPDIRW 386
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVI 289
+ P+ + +LS Q + L A ++ E + VY+TC++H +ENE VI
Sbjct: 387 RVTPA-------------TVQELSVLQGELLEQAATWVKPEGILVYATCTLHPLENEGVI 433
Query: 290 KSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYFEPIQW 330
+S L +Q+ P P+ AL+ + P W
Sbjct: 434 QSFL--ERHSEWQIRPPAPD---------SALAAFSTPQGW 463
>gi|406931867|gb|EKD67059.1| hypothetical protein ACD_48C00618G0001 [uncultured bacterium]
Length = 300
Score = 94.4 bits (233), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 74/237 (31%), Positives = 117/237 (49%), Gaps = 22/237 (9%)
Query: 64 KPRYVRVNTLKMDVDSAV-LELGKQFVVQKDDLVPDLLILPPG----CDLHVHPLIVNGC 118
+P +RVNTLK VD L +Q + + + P I+ DL + +G
Sbjct: 36 RPTTLRVNTLKTTVDQLTQLFDQQQILYEPSTISPISFIIKSDKRKLIDLDAY---TDGL 92
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
++Q +S + AL PKP K+LD +APG+KT +AALM G+IVA + ++ R +L
Sbjct: 93 FYIQSLSSMLPVIALDPKPNEKILDIAAAPGSKTTQIAALMNNTGQIVANDNSRIRGYKL 152
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +K G N ++ L + P Y + L+D CS GT + +
Sbjct: 153 QANLKTQGVTNTIIVISAGQTLWQQYPEYFD--RTLVDAPCSMEGTF---------TTTN 201
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
T + +++ L +L QK LR A+S PG +VYSTC++ ENE +I+ +L
Sbjct: 202 PKTYEHWKVKSLKELVQRQKWLLRSAVSATKPG-GIIVYSTCTLESEENEKIIEWIL 257
>gi|20094111|ref|NP_613958.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
gi|19887109|gb|AAM01888.1| tRNA/rRNA cytosine-C5-methylase [Methanopyrus kandleri AV19]
Length = 307
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 80/231 (34%), Positives = 107/231 (46%), Gaps = 18/231 (7%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P YVRVNTLK DV+ V L V + + L +L L V G ++LQ
Sbjct: 32 PTYVRVNTLKADVEEVVENLETAGVELAETPLSYAFRVLSSPGPLGSSLEHVAGYLYLQD 91
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
AS + L P+P V+D C+APG+KT LA L+ G+G ++A + + RVR L +
Sbjct: 92 LASMVPPELLDPEPPGPVIDLCAAPGSKTTQLAQLLGGEGVVLAVDADPRRVRALVHNVN 151
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
G N+ V H D L P +LLDP CSG GT H H
Sbjct: 152 RLGCVNVIVAHADAARLRISAP------FLLLDPPCSGEGTL----------HRDPHALR 195
Query: 244 PTEMERLNKLSAFQKKALRHALS-FPGVERVVYSTCSIHQVENEDVIKSVL 293
++ + + Q + LR AL P R+VYSTC+ ENE VI L
Sbjct: 196 TWTPKKPGRFARTQLRLLRAALRMLPPGGRLVYSTCTFSVEENELVIHEAL 246
>gi|392426904|ref|YP_006467898.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus acidiphilus SJ4]
gi|391356867|gb|AFM42566.1| ribosomal RNA small subunit methyltransferase RsmB
[Desulfosporosinus acidiphilus SJ4]
Length = 452
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 112/230 (48%), Gaps = 14/230 (6%)
Query: 63 PKPRYVRVNTLKMD-VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P ++R NTLK+ D A +G +V+ + VP+ L + + G +
Sbjct: 177 PAQTWIRTNTLKISRQDLADRLMGTGVLVEFGERVPESLRIQNFGAIEGLEAFKAGYFTV 236
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q ++S ++A ++P+ G +VLDACSAPG KT HLA +MK +G IVA +++ ++ ++
Sbjct: 237 QDESSQLIAHVVSPEAGQRVLDACSAPGGKTTHLAQMMKDEGVIVAFDVHTHKLELIEQL 296
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
+ G IE GD +L +P + +L+D CSG G R D L A G
Sbjct: 297 AQRLGITCIETRLGDARDLTGIEPCSQQ--RVLVDAPCSGLGVLRRRSD-LRWQKAEGDI 353
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIK 290
D L Q L A S V ++YSTC+I EN ++IK
Sbjct: 354 QD---------LPVLQLAILERAASCVDVGGDLIYSTCTIEPEENFELIK 394
>gi|375082720|ref|ZP_09729767.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus litoralis DSM 5473]
gi|374742568|gb|EHR78959.1| tRNA/rRNA cytosine-C5-methylase [Thermococcus litoralis DSM 5473]
Length = 442
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/240 (31%), Positives = 121/240 (50%), Gaps = 33/240 (13%)
Query: 65 PRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVF 120
P +R N +K DV++ + + G +F ++ + V ++ IL P + L G
Sbjct: 179 PTSIRANLIKTSVGDVENHLRKKGVRF--ERSNRVETVIRILDP---FNPEWLFNKGYAI 233
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q +AS++ + L+PKPG V+D +APG KT H+A LM+ KGKI A +++K R++R+K+
Sbjct: 234 AQEEASAVASLILSPKPGETVVDLAAAPGGKTSHMAELMENKGKIYAFDVDKTRIKRMKE 293
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
++ +G EV+ D P+ ++LD C+ GT A+
Sbjct: 294 VLRRTGVEIAEVIKADGRKA-PELLGEEIADKVMLDAPCTSDGTIAK------------- 339
Query: 241 TADPTEMERLN-----KLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+P RL K+ QK+ + A PG R++YSTCS+ ENE+VIK L
Sbjct: 340 --NPELRWRLREKNIPKVVTLQKELIESAWKLLKPG-GRLLYSTCSMLPEENEEVIKWFL 396
>gi|319941941|ref|ZP_08016262.1| fmu domain-containing protein [Sutterella wadsworthensis 3_1_45B]
gi|319804594|gb|EFW01464.1| fmu domain-containing protein [Sutterella wadsworthensis 3_1_45B]
Length = 491
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 87/307 (28%), Positives = 143/307 (46%), Gaps = 24/307 (7%)
Query: 34 IQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQK 92
+Q L Q L D ALY P +RVN LK + + EL K V
Sbjct: 185 VQAELPQWLFDLIEAQYPDSQALYAAMKEGAPLDLRVNLLKATREEVLAELAKNGVEAYP 244
Query: 93 DDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKT 152
L PD + LP L P+ +G V +Q + S ++A L P+ + D C+ G KT
Sbjct: 245 TPLSPDGVRLPTKPGLTRWPIYQDGLVDVQDEGSQLIARLLTPRRREMICDFCAGAGGKT 304
Query: 153 VHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVR 211
+ L ALM+ G + A ++N++R+ L ++ +G +N+ + DP+ ++
Sbjct: 305 LALGALMRSTGSLYAFDVNEKRLAGLAPRMRRAGLSNVHPVAIKS-EADPRVRRLANKFD 363
Query: 212 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF-PGV 270
+L+D C+GSGT D L S P E++R+N + QK+ L A
Sbjct: 364 RVLVDAPCTGSGTLRRNPD--LKWRLS-----PEELDRINDI---QKRVLESASRLVKKG 413
Query: 271 ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYFEPIQW 330
R+VY+TCS+ + EN+DV+++ L A G++L + + I+FEP Q
Sbjct: 414 GRLVYATCSLLKRENQDVVEAFL--AEHPGWRLVP--------VKEVFEQQGIHFEPGQL 463
Query: 331 KTKKAFL 337
+ + ++
Sbjct: 464 ERFEGYM 470
>gi|295397805|ref|ZP_06807870.1| ribosomal RNA small subunit methyltransferase B [Aerococcus
viridans ATCC 11563]
gi|294973940|gb|EFG49702.1| ribosomal RNA small subunit methyltransferase B [Aerococcus
viridans ATCC 11563]
Length = 482
Score = 94.0 bits (232), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 75/251 (29%), Positives = 123/251 (49%), Gaps = 27/251 (10%)
Query: 55 ALYQTPDVPKPRYVRVNTLKMDVDSAVLEL--GKQFVVQKDDLVPDLLILPPGCDLHVHP 112
+L QTP + + N L D + E+ + F V L P L + G H
Sbjct: 199 SLNQTPFITVRANNKFNNLDNDKMTEYQEILEAEGFSVAPSPLSPFALRVTKGNPAH-SS 257
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
L +NG + +Q +++ + AL PKPG VLDAC+APG KTV +A + G ++AC++ +
Sbjct: 258 LFMNGEITIQDESALLAVEALNPKPGETVLDACAAPGGKTVQIAEAVGRTGHVIACDIAE 317
Query: 173 ERVRRLKDTI-KLSGAANIEVLHGDFLNL------DPKDPAYSEVRAILLDPSCSGSGTA 225
++ +++ + ++ A ++E+LH D L + +P + IL+D CSG G
Sbjct: 318 NKLPLIQENVDRMQVADHVEILHQDATALLDRFGENGSEP--TSFDKILVDAPCSGVGLF 375
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQ 282
+ D T ++ L+ L Q + AL GV + YSTC+I +
Sbjct: 376 RRKPD----------TKYHKTLQDLDALHDIQVTIMNQALPLLKKGGV--ITYSTCTITR 423
Query: 283 VENEDVIKSVL 293
ENEDV+K++L
Sbjct: 424 EENEDVVKAIL 434
>gi|383766124|ref|YP_005445105.1| putative RNA methyltransferase [Phycisphaera mikurensis NBRC
102666]
gi|381386392|dbj|BAM03208.1| putative RNA methyltransferase [Phycisphaera mikurensis NBRC
102666]
Length = 310
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 114/237 (48%), Gaps = 19/237 (8%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDL--VPDLLILPPGCDLHV-HPLIVNGC 118
P+P +RVNTL+++ +A L + + + + P L V HPL+ G
Sbjct: 32 APRPVALRVNTLRLEPRTAAAALARDGLPAEPVAWSAAAFTVDPRRRALLVRHPLVEQGD 91
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
V+ QG AS + A L P+PG VLD C+APG KT+ LAA + + A E +K R RL
Sbjct: 92 VYPQGLASQLAAFVLDPRPGEAVLDLCAAPGGKTLDLAARLGPGADLAAVEASKPRFFRL 151
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ ++ +GA ++ D K P + A+LLD CSG RL
Sbjct: 152 RANLERAGAGSVRTYLHDGRRTGDKVPGRFD--AVLLDAPCSGD----TRLR-------G 198
Query: 239 GHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVENEDVIKSVL 293
G + + +L Q+ L A+ + PG RV+Y+TCS+ ENE VI + L
Sbjct: 199 GDDPSAWSVSKARRLGRKQRDLLASAIRCTRPG-GRVLYATCSMCPEENEAVIDAAL 254
>gi|327400017|ref|YP_004340856.1| Fmu (Sun) domain-containing protein [Archaeoglobus veneficus SNP6]
gi|327315525|gb|AEA46141.1| Fmu (Sun) domain protein [Archaeoglobus veneficus SNP6]
Length = 440
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 130/280 (46%), Gaps = 51/280 (18%)
Query: 15 HPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
HP W V A K L+ + AI+L +A + YVRVN LK
Sbjct: 149 HPEWYVEYAIK-LLGREQAIELMIANM---------------------QNTTYVRVNELK 186
Query: 75 MDVDSAVLELGKQFVVQKDDLVPDLLIL------PPGCDLHVHPLIVNGCVFLQGKASSM 128
++S V + +++ V ++ +P++ + P + H +G +Q AS++
Sbjct: 187 ASIES-VRKYLERYCVIEETCLPEVFKVVAWDRHPSTLEWHA-----DGKYVVQDLASTL 240
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
VA A+ P+PG +VLD +APG KT H+A LM+ +GKI+A + ++ERVRR+K +K G
Sbjct: 241 VAHAMKPEPGERVLDLAAAPGLKTSHIAMLMENRGKIMAVDNSEERVRRMKAKMKKLGVE 300
Query: 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
+E D + K +LLDP CS +G D +
Sbjct: 301 IVECRVADGVKFRWK------ADRVLLDPPCSTTGA-------FRNYPCVKWRYDEYKYR 347
Query: 249 RLNKLSAFQKKALRHALSFPGVER-VVYSTCSIHQVENED 287
KL Q++ L +A G VVYSTCSI ENE+
Sbjct: 348 ATVKL---QRRMLENAYRNVGEGGVVVYSTCSITFDENEE 384
>gi|298675861|ref|YP_003727611.1| RNA methylase [Methanohalobium evestigatum Z-7303]
gi|298288849|gb|ADI74815.1| RNA methylase, NOL1/NOP2/sun family [Methanohalobium evestigatum
Z-7303]
Length = 292
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 77/237 (32%), Positives = 122/237 (51%), Gaps = 26/237 (10%)
Query: 63 PKPRYVRVNTLKMDV---DSAVLELGKQFVVQKDDLVPDLLIL--PPGCDLHVHPLIVNG 117
P+P +R+NT+K +V S + + G F ++ D + L + PG + +H + G
Sbjct: 21 PQPYDIRINTIKANVPEIKSLLTQTG--FSFEQRDWNNEFLKVDFEPGKSI-LHWI---G 74
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
+Q S + AL P P +VLD C+APG+KT ++ LM+ G+I+A +++K R+R
Sbjct: 75 KYHVQESVSGIPPLALNPIPYDRVLDMCAAPGSKTSQMSVLMENTGEILANDISKNRIRS 134
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
L + G N++VL D N+ P S+ +L+D CS G A + D L
Sbjct: 135 LLSNVSRLGCVNVQVLERDGRNI----PEKSKFDRVLVDAPCSAEGNARKNNDLL----- 185
Query: 238 SGHTADPTEMERLNKL-SAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ AD + R+++L ++ KKA R L G VVYSTC+ ENE V+ L
Sbjct: 186 --NGADTETITRISELQTSLLKKAFR--LCKTG-GTVVYSTCTFAPEENEIVVSKFL 237
>gi|350572534|ref|ZP_08940829.1| RsmB/NOP family methyltransferase [Neisseria wadsworthii 9715]
gi|349789831|gb|EGZ43765.1| RsmB/NOP family methyltransferase [Neisseria wadsworthii 9715]
Length = 418
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 76/229 (33%), Positives = 113/229 (49%), Gaps = 18/229 (7%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P P +RVNTLK D + +L K+ F Q P + L L+ HPL ++G + +
Sbjct: 148 PAPLDIRVNTLKSKRDKVLAQLQKEGFAAQATPFSPWGIRLKDKPSLNRHPLFLDGTLEI 207
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q + S ++A L K G V+D C+ G KT+ +AA+M KG+I A ++ ++R+ LK
Sbjct: 208 QDEGSQLLALLLGAKRGEIVVDFCAGAGGKTLAIAAMMANKGRIYAFDIAEKRLANLKPR 267
Query: 182 IKLSGAANIEVLHGDFLN--LDPKDPA-YSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +G ANI H + ++ DP+ Y + +L+D CSG GT D
Sbjct: 268 MARAGVANI---HPERISSETDPRIARLYGKADRVLVDAPCSGLGTLRRNPD-------L 317
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENE 286
+ P E L L A Q L A + R+VY+TCSI ENE
Sbjct: 318 KYRQSP---ETLASLRAQQAAILAEAAKLVNEKGRLVYATCSILPEENE 363
>gi|330828844|ref|YP_004391796.1| tRNA and rRNA cytosine-C5-methylase [Aeromonas veronii B565]
gi|423210470|ref|ZP_17197024.1| ribosomal RNA small subunit methyltransferase B [Aeromonas veronii
AER397]
gi|328803980|gb|AEB49179.1| tRNA and rRNA cytosine-C5-methylase [Aeromonas veronii B565]
gi|404616358|gb|EKB13316.1| ribosomal RNA small subunit methyltransferase B [Aeromonas veronii
AER397]
Length = 403
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVF 120
+PK RY+RVNTLK D L K+ V + V L + L +GC
Sbjct: 150 MPK-RYLRVNTLKCTRDELQAMLAKEQVTTIPVEAVETALQVTSDAALFRTKAFADGCFE 208
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S +VAAAL PG +V+DAC+ G KT+H+AA+M+GKG+++A ++ + ++ LK
Sbjct: 209 QQDAGSQLVAAALEVAPGMRVIDACAGAGGKTLHIAAMMQGKGRLLAMDVEEWKLENLKQ 268
Query: 181 TIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA N+E V+ K+ A +LLD CSG G D A
Sbjct: 269 RARRAGAHNVETRVITSSKTVKRLKESADR----VLLDVPCSGLGVLKRNPDAKWRDTA- 323
Query: 239 GHTADPTEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
ERL L A Q++ L R++ +VY+TCSI EN + L
Sbjct: 324 ---------ERLPVLVALQEEILQRYSQMVKVGGLLVYATCSILPEENRQQVDKFLAANE 374
Query: 298 SF 299
+F
Sbjct: 375 NF 376
>gi|330915499|ref|XP_003297055.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Pyrenophora teres f. teres
0-1]
gi|311330482|gb|EFQ94850.1| hypothetical protein PTT_07336 [Pyrenophora teres f. teres 0-1]
Length = 745
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ + EL + + + L P L I
Sbjct: 286 EAQAFFEANETPRPIVIRTNTLR----THRRELAQTLINRGVQLEPVGKWSKVGLQIFDT 341
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G LQ +S + ALAP+ +VLD +APG KT HLAALMK G
Sbjct: 342 QVPLGATPEYLAGHYILQAASSFLPVMALAPQENERVLDMAAAPGGKTTHLAALMKNTGC 401
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I A + NK+R + L I GA N+ V H L + V LLD CSG+G
Sbjct: 402 IFANDANKDRAKGLIGNIHRLGARNVIVSHYSALEFPRVMGGFDRV---LLDAPCSGTGV 458
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNK---LSAFQKKALRHALSFPGVERVVYSTCSIH 281
A+ D + ++ + AD ++ L K L+A ++ H+ G +VYSTCS+
Sbjct: 459 IAK--DASVKTNKT--EADFMKLPHLQKQLLLAAID--SVNHSSKTGGY--IVYSTCSVT 510
Query: 282 QVENEDVIKSVL 293
ENE V++ L
Sbjct: 511 LEENEQVVQYAL 522
>gi|194014930|ref|ZP_03053547.1| ribosomal RNA small subunit methyltransferase B [Bacillus pumilus
ATCC 7061]
gi|194013956|gb|EDW23521.1| ribosomal RNA small subunit methyltransferase B [Bacillus pumilus
ATCC 7061]
Length = 442
Score = 94.0 bits (232), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 80/245 (32%), Positives = 118/245 (48%), Gaps = 24/245 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLE---LGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
VP + +RVN +M + A L+ L + DL D L L G + P G
Sbjct: 171 VPPKQTLRVN--RMKIGRAALQQELLDAGIETELGDLSEDALKLMKGSIVST-PSFQEGY 227
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
V +Q ++S +VA AL P+PG VLDAC+APG K+ H+A M KG+IV+ +L++ +V+ +
Sbjct: 228 VTIQDESSMLVARALDPQPGEAVLDACAAPGGKSTHIAERMNDKGQIVSLDLHEHKVKLI 287
Query: 179 KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSH 236
K K N+ + L+ YSE IL+D CSG G + D
Sbjct: 288 KQAAK---RLNLTQIEAKALDARKAKGDYSEASFDRILIDAPCSGFGVIRRKPDM----- 339
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLP 294
+T + R L+A Q+ L+ L PG +VYSTC++ EN+ VI + L
Sbjct: 340 --KYTKSKEDSAR---LAAIQQAILKETAPLLKPG-GTLVYSTCTMDPTENQQVIHAFLQ 393
Query: 295 IAMSF 299
F
Sbjct: 394 EHQDF 398
>gi|410658818|ref|YP_006911189.1| Ribosomal RNA small subunit methyltransferase B [Dehalobacter sp.
DCA]
gi|410661804|ref|YP_006914175.1| Ribosomal RNA small subunit methyltransferase B [Dehalobacter sp.
CF]
gi|409021173|gb|AFV03204.1| Ribosomal RNA small subunit methyltransferase B [Dehalobacter sp.
DCA]
gi|409024160|gb|AFV06190.1| Ribosomal RNA small subunit methyltransferase B [Dehalobacter sp.
CF]
Length = 471
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 126/276 (45%), Gaps = 18/276 (6%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLH 109
E+ AL + + P +RVNTLK L Q + V + P+ LIL L
Sbjct: 185 EETEALLKANNEPSLTSIRVNTLKTTRQELKTLLESQEIEVADGEYTPESLILKDFGGLD 244
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
NG +Q ++S + A L + G VLD CSAPG KT HLA LMK KG IVA +
Sbjct: 245 QLWEFQNGYFAVQDQSSQLAAHLLGAREGDSVLDVCSAPGGKTTHLAQLMKNKGTIVAVD 304
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ +++ +K++ + G I+ + GD L+ + V L+D CSG G +R
Sbjct: 305 MYPQKLDLIKESAERLGITMIKTVEGDARILEGIGEKFDRV---LVDAPCSGLGVLRKRA 361
Query: 230 DHLLPSHASGHTADPTEMERLNKLS-AFQKKALRHALSFPGVERVVYSTCSIHQVENEDV 288
D E+ +L +L A KA H G E +VYSTC++ EN +V
Sbjct: 362 DLRWQKRED-------EISKLPELQLAILLKAADHVRE--GGE-LVYSTCTMEPEENFEV 411
Query: 289 IKS---VLPIAMSFGFQLATPFPNGTAEASQFLKAL 321
+K+ + P +S + PF + Q K +
Sbjct: 412 VKAFRQLKPEFVSVDLSGSLPFAAEERDLKQLRKGV 447
>gi|406981882|gb|EKE03270.1| hypothetical protein ACD_20C00225G0014 [uncultured bacterium]
Length = 445
Score = 94.0 bits (232), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 123/262 (46%), Gaps = 20/262 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDD-LVPDLLILPPGCDL 108
IED + + ++ +RVNTLK+ + + V DD +V + +I+ +
Sbjct: 158 IEDTRKICKYNNLAPKLVIRVNTLKISKEKLIDFFIHNNVSFFDDRIVDECMIVHHHNSV 217
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P G +Q ++SS+V+ L P+ KVLD C+APG KT H+AALM G+I A
Sbjct: 218 KSIPGFEEGFWTVQSESSSLVSIVLDPQENGKVLDLCAAPGGKTTHIAALMNDTGEITAV 277
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++N +R+ ++++ G ++++ D D Y IL+D CS +G +R
Sbjct: 278 DINPKRLEKVQNNCLRLGVKSVKIKAADATKYQS-DKKYDR---ILIDAPCSNTGVLIKR 333
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVEN 285
+D + P E + L+ Q + L +A G+ +VYSTCSI EN
Sbjct: 334 ID-------ARWKKSP---EDIQNLAILQLEILNNAAKLVKSGGI--IVYSTCSIEPEEN 381
Query: 286 EDVIKSVLPIAMSFGFQLATPF 307
+ VI+ L F P+
Sbjct: 382 QQVIEKFLENNRDFQADKIMPY 403
>gi|145344001|ref|XP_001416528.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576754|gb|ABO94821.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 485
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/257 (31%), Positives = 120/257 (46%), Gaps = 29/257 (11%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLI 101
S+++ M L + + +P +R NTLK+ EL + + + +L P LL+
Sbjct: 181 SVDETMELLEANEQQRPVTIRTNTLKV----RRRELAESLINRGVNLDPVGKWSKVGLLV 236
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ P + G LQ +S + ALAP+ G +VLD +APG KT +LAALM+
Sbjct: 237 YDSRVPIGATPEYMAGHYILQSASSFLPCMALAPQEGERVLDMAAAPGGKTTYLAALMRN 296
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
G I A E K+R+ L ++ G N V + D L PK V +LLD CSG
Sbjct: 297 TGMIFANEYQKKRLNSLVANLQRLGCTNSTVCNYDGRAL-PK--VIGHVDRVLLDAPCSG 353
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYS 276
+G A+ D + + S E + K + QK+ L A+ VVYS
Sbjct: 354 TGVIAK--DSSVKTSKSA--------EDIAKCAHLQKELLVAAIDCCDANSKTGGYVVYS 403
Query: 277 TCSIHQVENEDVIKSVL 293
TCSI ENE V+ +L
Sbjct: 404 TCSIAVEENEAVVDYIL 420
>gi|254423387|ref|ZP_05037105.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
PCC 7335]
gi|196190876|gb|EDX85840.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
PCC 7335]
Length = 491
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 107/208 (51%), Gaps = 20/208 (9%)
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
P G +Q ++ +V+ L P+PG ++DAC+APG K++H+A LM+ +G + +C+
Sbjct: 275 PGYAEGWWAVQDSSAQLVSYLLDPQPGEVIIDACAAPGGKSLHIAELMRNEGTVWSCDRT 334
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY-SEVRAILLDPSCSGSGTAAERLD 230
R ++++ I GA + + GD N P + + +LLD CSG GT
Sbjct: 335 SSRTKKIQQNIDRLGATIVRPIMGDSRN----QPTFLGQGDRVLLDVPCSGLGT------ 384
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDV 288
L HA + ++ L Q++ L HA ++ PG +VY+TC++H ENE
Sbjct: 385 --LNRHADARWRQTP--DSVDSLVTLQQEILMHASTWVKPG-GVLVYATCTLHPQENEAQ 439
Query: 289 IKSVLPIAMSFGFQLATPFPNGTAEASQ 316
IK+ L + + G+ + P P+ E ++
Sbjct: 440 IKTFL--SQNAGWTIEAPPPSFGIEPTE 465
>gi|56420302|ref|YP_147620.1| hypothetical protein GK1767 [Geobacillus kaustophilus HTA426]
gi|56380144|dbj|BAD76052.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 454
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 122/268 (45%), Gaps = 31/268 (11%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
++ A+Y+ + +RVN LK D F + P P
Sbjct: 20 DEFFAVYENEKI---NGLRVNPLK--TDPGAWAKTAPFSLSPVPFCPTGFYYEPDEQPGK 74
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
HP G ++Q ++ VA AL P PG +VLD C+APG KT L A+M+ KG +VA E+
Sbjct: 75 HPYHAAGLYYIQEPSAMAVAEALRPAPGERVLDLCAAPGGKTTQLGAMMENKGLLVANEI 134
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+ +RV+ L + ++ G N V++ L + P + + IL+D CSG G R D
Sbjct: 135 HPKRVKALAENVERFGLTNTVVVNETPEALAEQFPGFFD--KILVDAPCSGEGMF--RKD 190
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENED 287
S S P +E + +A Q++ L A + G+ +VYSTC+ ENE
Sbjct: 191 EEAASFWS-----PAYVE---ECAARQRRILESAYAMLKEGGI--LVYSTCTFSPEENEQ 240
Query: 288 VIK---------SVLPIAMSFGFQLATP 306
I+ +LPIA + G + P
Sbjct: 241 TIEWLLETYDDLRLLPIAKAGGLEPGRP 268
>gi|406677947|ref|ZP_11085127.1| ribosomal RNA small subunit methyltransferase B [Aeromonas veronii
AMC35]
gi|404623754|gb|EKB20604.1| ribosomal RNA small subunit methyltransferase B [Aeromonas veronii
AMC35]
Length = 403
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVF 120
+PK RY+RVNTLK D L K+ V + V L + L +GC
Sbjct: 150 MPK-RYLRVNTLKCTRDELQAMLAKEHVTTIPVEGVETALQVTSDAALFRTKAFADGCFE 208
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S +VAAAL PG +V+DAC+ G KT+H+AA+M+GKG+++A ++ + ++ LK
Sbjct: 209 QQDAGSQLVAAALEVAPGMRVIDACAGAGGKTLHIAAMMQGKGRLLAMDVEEWKLENLKQ 268
Query: 181 TIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA N+E V+ K+ A +LLD CSG G D A
Sbjct: 269 RARRAGAHNVETRVITSSKTVKRLKESADR----VLLDVPCSGLGVLKRNPDAKWRDTA- 323
Query: 239 GHTADPTEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
ERL L A Q++ L R++ +VY+TCSI EN + L
Sbjct: 324 ---------ERLPVLVALQEEILQRYSQMVKVGGLLVYATCSILPEENRQQVDKFLAANE 374
Query: 298 SF 299
+F
Sbjct: 375 NF 376
>gi|315229812|ref|YP_004070248.1| ribosomal RNA small subunit methyltransferase B [Thermococcus
barophilus MP]
gi|315182840|gb|ADT83025.1| ribosomal RNA small subunit methyltransferase B [Thermococcus
barophilus MP]
Length = 310
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/233 (32%), Positives = 110/233 (47%), Gaps = 14/233 (6%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDLHVHPLIVNGCVF 120
P PR RVNTL+ ++ L K+ F ++ + L + P ++G ++
Sbjct: 36 PLPRCFRVNTLRTEIPKLTKLLNKKGFQFKRVPWAKEGFCLTREPFSITSTPEYLSGLLY 95
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q +S AL PKPG V D +APG KT ++A LMK G I A ++ +ER++ ++
Sbjct: 96 IQEASSMYPPIALEPKPGEVVADMAAAPGGKTSYMAQLMKNGGIIYAFDVGEERLKEMRL 155
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+ G N+ V H L + E ILLD C+GSGT H P S
Sbjct: 156 NLSRLGVTNVVVFHKSSLYMGELG---IEFDKILLDAPCTGSGTI-----HKNPERKSNR 207
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
T D +++ L K L GV +VYSTCS+ ENE V++ VL
Sbjct: 208 TLD--DIKFCQNLQMKMIKVALENLKKGGV--LVYSTCSLEPEENEFVVQWVL 256
>gi|223043738|ref|ZP_03613781.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
capitis SK14]
gi|417907062|ref|ZP_12550838.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
capitis VCU116]
gi|222442835|gb|EEE48937.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
capitis SK14]
gi|341596693|gb|EGS39284.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
capitis VCU116]
Length = 435
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/246 (30%), Positives = 118/246 (47%), Gaps = 19/246 (7%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P VR N + VD + +L + F V+KDD++P L + G + +G V +
Sbjct: 174 PVKTTVRANISRGSVDDIINKLENEGFNVEKDDILPFCLHVS-GQTIVNSRAFKDGYVSI 232
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q K+S MVA + KVLDACSAPG K H+A ++ +G+I A +++ ++ +K
Sbjct: 233 QDKSSMMVAHIMKLGRDDKVLDACSAPGGKACHMAEILSPEGQIDATDIHSHKIDLIKHN 292
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
IK NI D +P D Y + IL+D CSG G + + +T
Sbjct: 293 IKKLKLDNIHAFQHD--ATEPYDGLYDK---ILVDAPCSGLGVLRHKPE-------IKYT 340
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF 301
++ L L + ++H + G + YSTC+I Q+ENE+VI + L F F
Sbjct: 341 QSQDSIQSLVDLQLQILENIKHNIKPGGT--ITYSTCTIEQMENENVIYTFLKQNEEFEF 398
Query: 302 QLATPF 307
+ PF
Sbjct: 399 E---PF 401
>gi|373454494|ref|ZP_09546360.1| ribosomal RNA small subunit methyltransferase B [Dialister
succinatiphilus YIT 11850]
gi|371935769|gb|EHO63512.1| ribosomal RNA small subunit methyltransferase B [Dialister
succinatiphilus YIT 11850]
Length = 448
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 83/264 (31%), Positives = 127/264 (48%), Gaps = 36/264 (13%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP---DLLILPPGCDLH 109
L A +TP + VRVNTLK + D+ + ++ + K + VP + LIL G
Sbjct: 179 LEAFNETPKLA----VRVNTLKTNRDALQKMMAEKGI--KTEAVPWDNNALILLEGAHA- 231
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
PL G ++Q +S + AA L+PK G +VLD C+APG+KT +A +MK G I A +
Sbjct: 232 FWPLAEEGLAYVQSLSSMIPAAILSPKEGDRVLDMCAAPGSKTTQMAEMMKNNGTIDAWD 291
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA-YSEVRAILLDPSCSGSGTAAER 228
L ++ +K+ K G I ++H + PA + +LLD CSG G + +
Sbjct: 292 LYPHKISLIKNNAKKLG---ISIIHAGARDSGKPFPALFGRYDKVLLDAPCSGLGVLSHK 348
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVEN 285
H + E L + Q+K L A S+ G+ +VYSTC+++ EN
Sbjct: 349 ------PEIRWHRKE----EDLKEFPPLQEKLLSCAASYVKEGGL--LVYSTCTLNPAEN 396
Query: 286 EDVIKSVL-------PIAMSFGFQ 302
ED ++ L P+ S G Q
Sbjct: 397 EDRVRQFLKEHQEFTPLEFSLGDQ 420
>gi|411120538|ref|ZP_11392910.1| ribosomal RNA small subunit methyltransferase RsmB [Oscillatoriales
cyanobacterium JSC-12]
gi|410709207|gb|EKQ66722.1| ribosomal RNA small subunit methyltransferase RsmB [Oscillatoriales
cyanobacterium JSC-12]
Length = 451
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/230 (30%), Positives = 113/230 (49%), Gaps = 18/230 (7%)
Query: 68 VRVNTLKMDVDS--AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+RVN LK V++ A ++ VV+ L L ++ + P +G +Q +
Sbjct: 184 LRVNRLKTTVENVEAAMQTAGVKVVRVPPLPYALRLVEHVGRIQDLPGFQDGWWVVQDCS 243
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ +V+ L P+PG V+DAC+APG KT H+A LM +G + AC+ R+++L+
Sbjct: 244 AQLVSYLLDPQPGEVVIDACAAPGGKTTHIAELMNDQGTVWACDKTSSRLKKLEQNCDRL 303
Query: 186 GAANIEVLHGDFLNLDPKDPAYSE-VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
+I + HGD L P +++ +LLD CSG GT L HA
Sbjct: 304 QLQSIRIHHGDSRVL----PRFNQPADRVLLDAPCSGLGT--------LHRHADARWRQT 351
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVIKSVL 293
+ +N+L + Q L A S+ V VY+TC++H ENE +I+ L
Sbjct: 352 PDT--VNQLVSLQCALLEQAASWIKANGVLVYATCTLHPAENEQIIQQFL 399
>gi|299535921|ref|ZP_07049241.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
fusiformis ZC1]
gi|424738860|ref|ZP_18167289.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
fusiformis ZB2]
gi|298728673|gb|EFI69228.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
fusiformis ZC1]
gi|422947344|gb|EKU41741.1| ribosomal RNA small subunit methyltransferase B [Lysinibacillus
fusiformis ZB2]
Length = 453
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 113/239 (47%), Gaps = 26/239 (10%)
Query: 63 PKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P + VRVNT K V A+ EL + + D++P+ L + G G + +
Sbjct: 182 PPVQTVRVNTTKATVKQAIAELEAEGLTAIQSDVIPECLYITNGQPARTKAF-KEGMITI 240
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q ++S + A L P PG +VLD C+APG KT H+A +M+ +G I+A +L+ ++ D
Sbjct: 241 QDESSMIPANVLNPSPGMRVLDMCAAPGGKTTHIAEIMQNEGSILATDLHPHKL----DL 296
Query: 182 IKLSGAANIEVLHGDFLNLDPKD----PAY---SEVRAILLDPSCSGSGTAAERLDHLLP 234
I N E L D + P D P + + AIL+D CSG G + D
Sbjct: 297 ID----HNTERLGLDIVETAPIDGRKAPEFLQAASFDAILVDAPCSGLGVMRRKPD---- 348
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+T ++E L K+ A L G ++VYSTC++ ENE +K+ L
Sbjct: 349 ---IKYTKREEDLESLQKIQLALLDAATKVLKTDG--KLVYSTCTVDIQENEGTVKAFL 402
>gi|159118308|ref|XP_001709373.1| Nucleolar protein NOP2 [Giardia lamblia ATCC 50803]
gi|157437489|gb|EDO81699.1| Nucleolar protein NOP2 [Giardia lamblia ATCC 50803]
Length = 502
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/293 (29%), Positives = 131/293 (44%), Gaps = 38/293 (12%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
D A + P+P +RVN+LK+ +L + + + +L P L I
Sbjct: 210 DFHAFITACEKPRPLTIRVNSLKV----KRRQLAQMLIARGVNLDPLGDWCKDGLQIFSS 265
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
+ P + G +Q AS + AL+PKPG ++LD +APG KT HL ALM+ G
Sbjct: 266 QVPIGATPEYLRGYYMIQDAASFLPPMALSPKPGERILDMSAAPGGKTTHLGALMQDSGM 325
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I+A ++N++R+ L+ + G + D L + V LLD C+G G
Sbjct: 326 ILANDMNRDRIPALQANLARMGVTCAVISCSDARELAQCTGNFDRV---LLDAPCTGLGV 382
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF----PGVERVV-YSTCS 279
++ D + ++ + E ++KLS QK+ L+ A P R+V YSTCS
Sbjct: 383 VSK--DASIKANRT--------FEDIHKLSHLQKELLKCAFDLLAKHPSSPRLVCYSTCS 432
Query: 280 IHQVENEDVIKSVL--------PIAMSFGFQLATPFPNGTAEASQFLKALSIY 324
+ ENE VI +L + +FG T F NG + KA Y
Sbjct: 433 VTLSENEAVIDCILRTRNVEVVDLPFNFGKPGITRF-NGVSYHPSIQKARRFY 484
>gi|420211892|ref|ZP_14717248.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM001]
gi|394280402|gb|EJE24683.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM001]
Length = 435
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVNHWVTHFGVEKTENIARSFLEPVATTVRANISRDSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGFGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|269797911|ref|YP_003311811.1| sun protein [Veillonella parvula DSM 2008]
gi|269094540|gb|ACZ24531.1| sun protein [Veillonella parvula DSM 2008]
Length = 451
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 125/243 (51%), Gaps = 22/243 (9%)
Query: 64 KPRYV-RVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPL--IVNGCV 119
+PR R+NT+K+ ++ + EL ++V++D +P+++ + G H+ +++G +
Sbjct: 185 QPRLTSRINTVKVSIEDCLKELEDLDWIVEQDTYIPEVVYID-GHQGHLEKAKPVLDGHI 243
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
KAS +VA + P+PG ++LD C+APG K++H+A+LM G I++C++ ++ +
Sbjct: 244 TFMDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLELIN 303
Query: 180 DTIKLSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
+ G + I ++ G +L D + +L+D CSG G ++LD
Sbjct: 304 QNAERLGVSIISTKLQDGRYL----PDNWKEQFDRVLVDAPCSGLGILQKKLDMRWRKTE 359
Query: 238 SGHTA-DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
S P ++E L K S K G +VYSTC+++ ENE V+ L I
Sbjct: 360 SLLIELPPLQLEILEKASKMVK--------VNGY--LVYSTCTMNSGENEAVLNKFLAIH 409
Query: 297 MSF 299
+F
Sbjct: 410 KNF 412
>gi|328950272|ref|YP_004367607.1| RNA methylase [Marinithermus hydrothermalis DSM 14884]
gi|328450596|gb|AEB11497.1| RNA methylase, NOL1/NOP2/sun family [Marinithermus hydrothermalis
DSM 14884]
Length = 450
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/229 (31%), Positives = 112/229 (48%), Gaps = 20/229 (8%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
+RVNTLK++ + + + ++ P+ PP HP G ++Q ++
Sbjct: 35 LRVNTLKLEPRA--FQALSPWPLEPIPWCPEGFYYPPEARPGPHPYFYAGLYYIQEPSAQ 92
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
V APKPG +VLD +APG KT HLAA M+G+G ++A E++ RVR L + ++ G
Sbjct: 93 AVGVLAAPKPGERVLDLAAAPGGKTTHLAARMQGQGLLIANEVDGRRVRGLLENVERWG- 151
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG---TAAERLDHLLPSHASGHTADP 244
A + V+ L Y + ++LD CSG G E + H P G A
Sbjct: 152 ARLAVVSARVEQLAQAWGGYFD--RVVLDAPCSGEGMFRKDPEAVRHWGP----GSPARA 205
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ ++R L+A AL PG +VY+TC+ ENE V+ ++L
Sbjct: 206 SRIQRRLILAA-------AALVRPGGV-LVYATCTFAPEENEAVVAALL 246
>gi|386827119|ref|ZP_10114226.1| tRNA/rRNA cytosine-C5-methylase [Beggiatoa alba B18LD]
gi|386428003|gb|EIJ41831.1| tRNA/rRNA cytosine-C5-methylase [Beggiatoa alba B18LD]
Length = 403
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 86/263 (32%), Positives = 126/263 (47%), Gaps = 20/263 (7%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHP 112
L AL Q +V +R NTLK+ A+ E +Q ++ + D LIL +L
Sbjct: 145 LHALNQQAEV----VIRANTLKI-TREALAEHLQQQGIETRPIATDGLILQKRQNLFKTQ 199
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
+G LQ +S VA AL G +V+DAC+ G KT+HLAALM+ KGKI+A ++
Sbjct: 200 AFQDGLFELQDTSSQQVAPALTVSAGMRVIDACAGGGGKTLHLAALMQNKGKIIALDVEA 259
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
+++ L+ K +GA IE D N Y +LLD CSG G
Sbjct: 260 WKLKNLQTRAKRAGAHIIESRLID--NRKVIKRLYDSADRLLLDVPCSGLGVLRRN---- 313
Query: 233 LPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292
P +A+ E+ R ++ Q + L G + +VYSTCSI EN+ I++
Sbjct: 314 -PDTKWKLSAEGLELVRTHQQEILQNYS---PLCRQGGQ-LVYSTCSILPSENQQQIQTF 368
Query: 293 LPIAMSFGFQL---ATPFPNGTA 312
L + + FQL +T FP+ T
Sbjct: 369 LE-SQAGRFQLLSESTLFPDVTG 390
>gi|303228540|ref|ZP_07315368.1| ribosomal RNA small subunit methyltransferase B [Veillonella
atypica ACS-134-V-Col7a]
gi|302516787|gb|EFL58701.1| ribosomal RNA small subunit methyltransferase B [Veillonella
atypica ACS-134-V-Col7a]
Length = 452
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 133/275 (48%), Gaps = 33/275 (12%)
Query: 51 EDLMALYQTPDVPKPRYV-RVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPP-GCD 107
EDL A + +P+ R+NT+ +D+ + L +Q + V +D D++ +
Sbjct: 177 EDLCAWFN----EQPKLTARINTILIDIPQCLTMLNEQGWAVTQDSNYEDIIYINSHRGS 232
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
L + G + KAS +VA + P+PG ++LD C+APG K++++AALM G +++
Sbjct: 233 LEKSEAFIKGYITFMDKASMLVARLVNPQPGERILDCCAAPGGKSMYIAALMDNVGSLMS 292
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
C++++ ++ + GA+ + D L D S +L+D CSG G +
Sbjct: 293 CDIHEHKIELMNSNADRLGASIVHTKVQDATKL--PDSWNSYFDRVLVDAPCSGLGILQK 350
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENE 286
+LD S L++L + Q L R A++ ++YSTC+++ ENE
Sbjct: 351 KLDMRWRKQES----------ILSELPSLQLAILERAAMTVKEKGYLIYSTCTLNYKENE 400
Query: 287 DVIK---------SVLPIAMSFGFQ----LATPFP 308
+V++ S++P+A F + + T +P
Sbjct: 401 EVVEAFLQKHKEFSIIPVADDFPLKSNSGMITTYP 435
>gi|34809569|pdb|1IXK|A Chain A, Crystal Structure Analysis Of Methyltransferase Homolog
Protein From Pyrococcus Horikoshii
Length = 315
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 112/247 (45%), Gaps = 18/247 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDL 108
E + + + + P PR RVNTLK+ V V L K+ F ++ + L +
Sbjct: 30 ERAIRIAEAXEKPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRVPWAKEGFCLTREPFSI 89
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P + G +++Q +S AL PKPG V D +APG KT +LA L + G I A
Sbjct: 90 TSTPEFLTGLIYIQEASSXYPPVALDPKPGEIVADXAAAPGGKTSYLAQLXRNDGVIYAF 149
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++++ R+R + + G N+ + H L++ + E ILLD C+GSGT
Sbjct: 150 DVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELN---VEFDKILLDAPCTGSGTI--- 203
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENE 286
H P T D + Q + L L PG +VYSTCS+ ENE
Sbjct: 204 --HKNPERKWNRTXDDIKF-----CQGLQXRLLEKGLEVLKPG-GILVYSTCSLEPEENE 255
Query: 287 DVIKSVL 293
VI+ L
Sbjct: 256 FVIQWAL 262
>gi|114047702|ref|YP_738252.1| Fmu (Sun) domain-containing protein [Shewanella sp. MR-7]
gi|113889144|gb|ABI43195.1| Fmu (Sun) domain protein [Shewanella sp. MR-7]
Length = 404
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
P R++RVN LK+ D +L +FV Q + V L + L +G
Sbjct: 149 TPPKRFLRVNGLKVSRDELAQKLAAEFVTTQAVEGVDSALEVTSDSALFRTDCFKDGLFE 208
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S VAAAL KPG +V+DAC+ G KT+H+AA M+GKG+++A ++ + ++ LK+
Sbjct: 209 QQDAGSQRVAAALDAKPGMRVIDACAGAGGKTLHIAAQMQGKGRLLAMDVEQWKLDNLKE 268
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA--ILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA NIE L + K ++ A +LLD CSG G D A
Sbjct: 269 RARRNGAHNIETR----LIVGSKTIKRLKLSADRVLLDVPCSGLGVLKRNPDAKWRDTA- 323
Query: 239 GHTADPTEMERLNKLSAFQKKAL---RHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL L QK L + G+ VVY+TCSI EN + + L
Sbjct: 324 ---------ERLPVLMELQKHILSSYSRMVKVGGI--VVYATCSIFPCENRGQVDAFL 370
>gi|427719814|ref|YP_007067808.1| sun protein [Calothrix sp. PCC 7507]
gi|427352250|gb|AFY34974.1| sun protein [Calothrix sp. PCC 7507]
Length = 451
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 68/229 (29%), Positives = 109/229 (47%), Gaps = 16/229 (6%)
Query: 68 VRVNTLKMDVDSA--VLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+R+N L+ +++ L+ FV + L L ++ + P G +Q +
Sbjct: 185 LRINPLRTSLEAVEMALQAADVFVKRIPYLPQALRLIGSSGPIPNLPGFQEGWWTVQDSS 244
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ +V+ L P+PG V+D C+APG KT H+A LM GK+ AC+ R+R+L++ +
Sbjct: 245 AQLVSHLLDPQPGEVVIDVCAAPGGKTTHIAELMGDSGKVWACDRTASRLRKLQENSRRL 304
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
+IE+ GD + Y+ +LLD CSG GT L HA
Sbjct: 305 NLQSIEICTGDSRHF---SQFYNVGDRVLLDAPCSGLGT--------LHRHADARWRQTP 353
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVIKSVL 293
E + +L+ Q + + H F V VY+TC++H ENE VI + L
Sbjct: 354 EA--IAELAKLQAELISHTSKFVKKNGVLVYATCTLHPAENEGVISAFL 400
>gi|225461943|ref|XP_002266112.1| PREDICTED: ribosomal RNA small subunit methyltransferase B [Vitis
vinifera]
gi|296089930|emb|CBI39749.3| unnamed protein product [Vitis vinifera]
Length = 525
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 71/228 (31%), Positives = 113/228 (49%), Gaps = 22/228 (9%)
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
L+ G +Q +++ +V + + P+PG ++D C+APG KT+ +A+ + G+G + A ++NK
Sbjct: 308 LLKEGLCSVQDESAGLVVSVVDPQPGESIIDCCAAPGGKTIFMASCLSGQGMVHAIDINK 367
Query: 173 ERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
R+R +K+T KL + I +H D +P S+ +LLD CSG G ++R D
Sbjct: 368 GRLRIVKETAKLLLVDDVITTVHADLCTFAKNNPVKSD--KVLLDAPCSGLGVLSKRAD- 424
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVI 289
L + S +E + +L Q + L A L PG +VYSTCSI ENE+ +
Sbjct: 425 -LRWNRS--------LEDMEQLKNLQDELLDAAAILVKPG-GVLVYSTCSIDPEENEERV 474
Query: 290 KSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYF-EPIQWKTKKAF 336
+ L F P G S F+ YF P++ AF
Sbjct: 475 AAFLQRHPEFSID-----PVGRYVPSDFVTEGGFYFSNPVKHALDGAF 517
>gi|375085444|ref|ZP_09732083.1| ribosomal RNA small subunit methyltransferase B [Megamonas
funiformis YIT 11815]
gi|374567314|gb|EHR38537.1| ribosomal RNA small subunit methyltransferase B [Megamonas
funiformis YIT 11815]
Length = 442
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 74/247 (29%), Positives = 119/247 (48%), Gaps = 18/247 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILPPGCD 107
E + L Q + P +R NTLK + EL G + + K L P+ +I
Sbjct: 163 EAAIKLCQFNNTNAPLVLRTNTLKTTRQELITELINAGCEVIPSK--LAPEGIICKTHTS 220
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
L+ + NG +Q ++S +VA + PKP ++D CSAPG KT H+A LM+ KGKI+A
Sbjct: 221 LNQLAPLQNGFAQVQDESSMLVAHVVDPKPNEFIIDTCSAPGGKTTHMATLMQNKGKIIA 280
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY-SEVRAILLDPSCSGSGTAA 226
C++ + +++ ++D G I ++ L+ Y ++ +L+D CSG G
Sbjct: 281 CDIYEHKLKLIQDNANRLG---INIIEPKLLDAREIGNQYKNQADKVLVDAPCSGMGVLR 337
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
+ P TA+ E+L L ++ A+ GV +VYSTC+I EN
Sbjct: 338 RK-----PDSRWNKTAEI--FEKLPPLQLAILESAARAVKPQGV--LVYSTCTIMPQENI 388
Query: 287 DVIKSVL 293
++I L
Sbjct: 389 EIINQFL 395
>gi|323701798|ref|ZP_08113469.1| sun protein [Desulfotomaculum nigrificans DSM 574]
gi|333923478|ref|YP_004497058.1| sun protein [Desulfotomaculum carboxydivorans CO-1-SRB]
gi|323533334|gb|EGB23202.1| sun protein [Desulfotomaculum nigrificans DSM 574]
gi|333749039|gb|AEF94146.1| sun protein [Desulfotomaculum carboxydivorans CO-1-SRB]
Length = 453
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 132/271 (48%), Gaps = 21/271 (7%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDS--AVLEL-GKQFVVQKDDLVPDLLILPPG 105
+ +AL + + P P +R NTLK++ A LE G + V K P+ L L
Sbjct: 166 GFDQTVALCKANNHPAPNTIRTNTLKINRTDLKARLEFEGVETRVTK--YAPEGLHLNGF 223
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
P G +Q ++S +VA AL P G +++D SAPG KT HLA LMK +G+I
Sbjct: 224 LSYQSLPSFQEGLFQVQDESSMLVAHALNPASGARIIDVASAPGGKTTHLAQLMKDRGEI 283
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA +++ ++ +K+ + G +I L D L + +++ +L+D CSG G
Sbjct: 284 VAVDIHPHKLELIKENCQRLGINSIRTLLADARCLPAEYTNWADY--VLVDAPCSGLGVL 341
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
R D + DP+++ + +L Q++ L A ++ PG ++YSTC+I +
Sbjct: 342 RRRPD-------ARWRKDPSQLPGIVRL---QREILESASTYLRPG-GVLIYSTCTITRE 390
Query: 284 ENEDVIKSVLPIAMSFGF-QLATPFPNGTAE 313
EN V+++ L F L P G AE
Sbjct: 391 ENIGVLEAFLADHPEFSLGDLRQFLPPGLAE 421
>gi|433462308|ref|ZP_20419895.1| Sun protein [Halobacillus sp. BAB-2008]
gi|432188996|gb|ELK46138.1| Sun protein [Halobacillus sp. BAB-2008]
Length = 448
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 85/281 (30%), Positives = 127/281 (45%), Gaps = 25/281 (8%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +R+ L+MD + V L + V++ L P LI+ G L HPL G V +Q
Sbjct: 179 PMSIRIQPLRMDREEVVSRLEEDGLTVEESQLSPQGLIVTGGAILK-HPLFAEGYVTVQD 237
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
++S +VA + G VLDACSAPG KT H+A M +G+I+A +L++++ + ++ K
Sbjct: 238 QSSMLVAEMMDLASGMTVLDACSAPGGKTTHIAEKMADEGEILAYDLHEKKAKLVEKKAK 297
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
+I D L K A R ILLD CSG G + D + H
Sbjct: 298 QLQLTSITAGQADSRKLGEKHAAEHFDR-ILLDAPCSGLGVLRGKPD--IKYHK------ 348
Query: 244 PTEMERLNKLSAFQKKALRH-ALSFPGVERVVYSTCSIHQVENEDVIKSVLP------IA 296
TE + + L Q L A ++VYSTC++ + ENE+ +K L +
Sbjct: 349 -TEQD-IYSLRLIQDDLLDEMAPLLKSGGKLVYSTCTVDRHENEEAVKHFLSKHPEFRVD 406
Query: 297 MSFGFQLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337
SF L +G + L+ P +W T FL
Sbjct: 407 PSFKEDLPPALRDGIGLSEHGLQLF-----PHEWDTDGFFL 442
>gi|423200602|ref|ZP_17187182.1| ribosomal RNA small subunit methyltransferase B [Aeromonas veronii
AER39]
gi|404620010|gb|EKB16914.1| ribosomal RNA small subunit methyltransferase B [Aeromonas veronii
AER39]
Length = 403
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 114/242 (47%), Gaps = 19/242 (7%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVF 120
+PK RY+RVNTLK D L K+ V + V L + L +GC
Sbjct: 150 MPK-RYLRVNTLKCTRDELQAILAKEHVTTIPVEGVETALQVTSDAALFRTKAFADGCFE 208
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S +VAAAL PG +V+DAC+ G KT+H+AA+M+GKG+++A ++ + ++ LK
Sbjct: 209 QQDAGSQLVAAALEVAPGMRVIDACAGAGGKTLHIAAMMQGKGRLLAMDVEEWKLENLKQ 268
Query: 181 TIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA N+E V+ K+ A +LLD CSG G D A
Sbjct: 269 RARRAGAHNVETRVITSSKTVKRLKESADR----VLLDVPCSGLGVLKRNPDAKWRDTA- 323
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER-VVYSTCSIHQVENEDVIKSVLPIAM 297
ERL L A Q++ L+ V +VY+TCSI EN + L
Sbjct: 324 ---------ERLPVLVALQEEILQRYSQMVKVGGLLVYATCSILPEENRQQVDKFLAANE 374
Query: 298 SF 299
+F
Sbjct: 375 NF 376
>gi|421498646|ref|ZP_15945739.1| tRNA and rRNA cytosine-C5-methylase [Aeromonas media WS]
gi|407182348|gb|EKE56312.1| tRNA and rRNA cytosine-C5-methylase [Aeromonas media WS]
Length = 409
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVF 120
+PK RY+RVNTLK + L K+ V D V L + L +GC
Sbjct: 156 MPK-RYLRVNTLKCSREELQAILAKEHVTTIPVDGVDTALQVTSDAALFRTKAFADGCFE 214
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S +VAAAL PG +V+DAC+ G KT+H+AA+M+GKG+++A ++ + ++ LK
Sbjct: 215 QQDAGSQLVAAALEVTPGMRVIDACAGAGGKTLHIAAMMEGKGRLLAMDVEEWKLENLKQ 274
Query: 181 TIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA N+E V+ K+ A +LLD CSG G D A
Sbjct: 275 RARRAGAHNVETRVITSSKTVKRLKESADR----VLLDVPCSGLGVLKRNPDAKWRDTA- 329
Query: 239 GHTADPTEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
ERL L A Q++ L R++ +VY+TCSI EN + L
Sbjct: 330 ---------ERLPVLVALQEEILQRYSQMVKVGGLLVYATCSILPQENRQQVDKFLAANE 380
Query: 298 SF 299
+F
Sbjct: 381 NF 382
>gi|338813384|ref|ZP_08625513.1| 16S rRNA methyltransferase B [Acetonema longum DSM 6540]
gi|337274743|gb|EGO63251.1| 16S rRNA methyltransferase B [Acetonema longum DSM 6540]
Length = 450
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 129/287 (44%), Gaps = 15/287 (5%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVD 78
P +++L L + + + L R E+L A + ++ P +R NTLK+ D
Sbjct: 136 PANHPDQYLSLRYYHPEWMIERWLTRYGFAFCEELCA---SNNLTPPLSLRTNTLKISRD 192
Query: 79 SAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKP 137
+ L +Q D P+ L+ L P + G +Q ++S +VA L P+P
Sbjct: 193 DLLDRLTAEQATATPSDWTPEGLVCTEHPALASMPSLQEGLFQVQDESSMLVAHVLGPQP 252
Query: 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDF 197
G ++DAC APG K+ H+AALM GK++A +L + ++ +++ K G +E D
Sbjct: 253 GEFIIDACGAPGGKSTHIAALMNNSGKVLATDLYEHKLALIRENAKRLGIHCLETRQMDA 312
Query: 198 LNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQ 257
+ L+ ++ +L+D CSG G + D + A P + SA
Sbjct: 313 VKLNSL--YKNQADRVLVDAPCSGLGVLRRKPDSRWRKNEKLLRALPDLQSAILHSSADC 370
Query: 258 KKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
K PG +VYSTC+I EN+DV+ L F + A
Sbjct: 371 VK--------PG-GILVYSTCTIEPEENQDVVNGFLASRRDFVLEHA 408
>gi|333371233|ref|ZP_08463192.1| RNA methyltransferase Sun [Desmospora sp. 8437]
gi|332976420|gb|EGK13268.1| RNA methyltransferase Sun [Desmospora sp. 8437]
Length = 453
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/185 (32%), Positives = 96/185 (51%), Gaps = 19/185 (10%)
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
L G +Q ++S +VA LAP+PG +VLD C+APG KT HLA M+ +G ++AC+++
Sbjct: 232 LFREGWFTVQDESSMLVAELLAPRPGERVLDGCAAPGGKTGHLAERMENRGTLLACDIHP 291
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLD 230
+V+ +++ ++ G + +EV D L P E R +LLD CSG G + D
Sbjct: 292 HKVKLIENQVRRLGLSMVEVRQADLREL----PGTGEARFDRVLLDAPCSGWGVIRRKPD 347
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDV 288
+ ++ ++ L Q + L A L PG +VYSTC++ EN +
Sbjct: 348 IKWSKN----------LQEVDSLRQLQAELLEAAARLVTPGGT-LVYSTCTLEPQENREQ 396
Query: 289 IKSVL 293
I + L
Sbjct: 397 ITAFL 401
>gi|385806067|ref|YP_005842465.1| Proliferating-cell nucleolar antigen p120-like protein
[Fervidicoccus fontis Kam940]
gi|383795930|gb|AFH43013.1| Proliferating-cell nucleolar antigen p120-like protein
[Fervidicoccus fontis Kam940]
Length = 331
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/182 (33%), Positives = 98/182 (53%), Gaps = 18/182 (9%)
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
++G +++QG S + + L+P KV+D +APG KT H+A LMK KG I++ ++N+ER
Sbjct: 107 LSGKIYVQGVGSMLASEVLSPVEDDKVVDMAAAPGGKTTHMAQLMKNKGIILSIDINRER 166
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
+ +L+ I+ A N+ VL D L ++ D + +V +LD C+G G + +
Sbjct: 167 IWKLRVNIERLNAKNVYVLRTDALKINGLDEYFDKV---MLDAPCTGEGLIVYKKER--- 220
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKS 291
+ G +E K+ Q L+ A F ++R ++YSTCSI ENE VI
Sbjct: 221 KFSKG-------IEDYKKMIPLQISMLKKA--FKLLKRGGKILYSTCSIAPEENEYVISQ 271
Query: 292 VL 293
VL
Sbjct: 272 VL 273
>gi|113970468|ref|YP_734261.1| Fmu (Sun) domain-containing protein [Shewanella sp. MR-4]
gi|113885152|gb|ABI39204.1| Fmu (Sun) domain protein [Shewanella sp. MR-4]
Length = 404
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
P R++RVN LK+ D +L +FV Q + V L + L +G
Sbjct: 149 TPPKRFLRVNGLKVSRDELAQKLATEFVTTQAVEDVDSALEVTSDSALFRTNSFKDGLFE 208
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S VAAAL KPG +V+DAC+ G KT+H+AA M+GKG+++A ++ + ++ LK+
Sbjct: 209 QQDAGSQRVAAALDAKPGMRVIDACAGAGGKTLHIAAQMQGKGRLLAMDVEQWKLDNLKE 268
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA--ILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA NIE L + K ++ A +LLD CSG G D A
Sbjct: 269 RARRNGAHNIETR----LIVGSKTIKRLKLSADRVLLDVPCSGLGVLKRNPDAKWRDTA- 323
Query: 239 GHTADPTEMERLNKLSAFQKKAL---RHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL L QK L + G+ VVY+TCSI EN + + L
Sbjct: 324 ---------ERLPVLMELQKHILSSYSRMVKVGGI--VVYATCSIFPCENRGQVDAFL 370
>gi|412990472|emb|CCO19790.1| predicted protein [Bathycoccus prasinos]
Length = 713
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/257 (31%), Positives = 120/257 (46%), Gaps = 29/257 (11%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLI 101
S+ + M L + + +P +R NTLK+ +L Q + + +L P LL+
Sbjct: 346 SVPETMELLEANETQRPVTLRTNTLKI----RRRDLAAQLINRGVNLDPIGKWSKVGLLV 401
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ P + G LQ +S + AL+P+ G +VLD +APG KT +LAALM+
Sbjct: 402 YDSRVPIGATPEYMAGMYMLQSASSFLPCMALSPQEGERVLDVAAAPGGKTTYLAALMRN 461
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
G I A E K+R+ L ++ G N V + D L PK Y V +LLD CSG
Sbjct: 462 TGIIFANEFQKKRLNSLVANLQRMGCTNSVVCNYDGRQL-PKVLGY--VDRVLLDAPCSG 518
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYS 276
+G A+ +S + T E + K + QK+ L A+ VVYS
Sbjct: 519 TGVIAK--------DSSVKVSKST--EDIAKCAHLQKELLVAAVDCCDANSKSGGYVVYS 568
Query: 277 TCSIHQVENEDVIKSVL 293
TCS+ ENE V+ +L
Sbjct: 569 TCSVTVEENEQVVDYIL 585
>gi|242373505|ref|ZP_04819079.1| rRNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
M23864:W1]
gi|242348868|gb|EES40470.1| rRNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
M23864:W1]
Length = 435
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 86/285 (30%), Positives = 135/285 (47%), Gaps = 35/285 (12%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AI+ ++ + +V + V IE A+ Q+ P VRVN + VDS V EL K+ F
Sbjct: 142 AIKYSIPKWIVDHWVTHHGIETTEAIAQSFLEPVKTTVRVNISRGSVDSIVAELEKEGFK 201
Query: 90 VQKDDLVPDLLILPPGCDLHV--HPLI-----VNGCVFLQGKASSMVAAALAPKPGWKVL 142
V+KD+++P C LH+ P+I +G V +Q K+S MVA + VL
Sbjct: 202 VEKDEILP-------FC-LHITGQPIINSRAFKDGYVSVQDKSSMMVAHIMNLGRNDVVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A +++ ++ + IK NI D
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHTHKIDLINFNIKKLKLDNISAFQH-----DA 308
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
+P IL+D CSG G + + +T ++ L +L + ++
Sbjct: 309 TEPYTRTYDKILVDAPCSGLGVLRHKPE-------IKYTQSKESIQSLVELQLQILENIK 361
Query: 263 HALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF 307
+ G +VYSTC+I Q+ENE+VI + L F F+ PF
Sbjct: 362 RNIKPGGT--IVYSTCTIEQMENENVIYTFLKQNEEFEFE---PF 401
>gi|189190438|ref|XP_001931558.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973164|gb|EDU40663.1| tRNA (cytosine-5-)-methyltransferase NCL1 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 739
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/252 (32%), Positives = 119/252 (47%), Gaps = 25/252 (9%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ + EL + + + L P L I
Sbjct: 286 EAQAFFEANETPRPIVIRTNTLR----THRRELAQTLINRGVQLEPVGKWSKVGLQIFDT 341
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G LQ +S + ALAP+ +VLD +APG KT HLAALMK G
Sbjct: 342 QVPLGATPEYLAGHYILQAASSFLPVMALAPQENERVLDMAAAPGGKTTHLAALMKNTGC 401
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I A + NK+R + L I GA N+ V H L + V LLD CSG+G
Sbjct: 402 IFANDANKDRAKGLIGNIHRLGARNVIVSHYSALEFPRVMGGFDRV---LLDAPCSGTGV 458
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNK---LSAFQKKALRHALSFPGVERVVYSTCSIH 281
A+ D + ++ + AD ++ L K L+A ++ H+ G +VYSTCS+
Sbjct: 459 IAK--DASVKTNKT--EADFMKLPHLQKQLLLAAID--SVNHSSKTGGY--IVYSTCSVT 510
Query: 282 QVENEDVIKSVL 293
ENE V++ L
Sbjct: 511 LEENEQVVQYAL 522
>gi|378823661|ref|ZP_09846269.1| putative ribosomal RNA small subunit methyltransferase B
[Sutterella parvirubra YIT 11816]
gi|378597534|gb|EHY30814.1| putative ribosomal RNA small subunit methyltransferase B
[Sutterella parvirubra YIT 11816]
Length = 491
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/289 (26%), Positives = 130/289 (44%), Gaps = 22/289 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLH 109
ED ALY P +RVN LK + + +L G PD + LP L
Sbjct: 201 EDAEALYPAMMEGAPLDLRVNLLKATREEVLEQLSGSGVTAFSTPYSPDGVRLPTKPGLT 260
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
P+ G V +Q + S ++A LAP+ + D C+ G KT+ L ALM+ G + A +
Sbjct: 261 QWPIYKEGKVDVQDEGSQLIARLLAPRRREMICDFCAGAGGKTLALGALMRSTGSLYAFD 320
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+N++R+ + ++ +G +N+ + + + +L+D C+GSGT
Sbjct: 321 VNEKRLAGMAPRMRRAGLSNVHPIAIRSEDDQRVRRLRGKFDRVLVDAPCTGSGTLRRNP 380
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF-PGVERVVYSTCSIHQVENEDV 288
D L S P E+ER+N++ QK L HA R+VY+TCS+ + EN+DV
Sbjct: 381 D--LKWRLS-----PDELERINRI---QKSVLEHASRLVKAGGRLVYATCSVLKRENQDV 430
Query: 289 IKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337
+++ L + A++ I F+ QW+ ++
Sbjct: 431 VEAFLAAHPEWKL----------VPAAEVFATQGITFDAAQWERFGSYF 469
>gi|118444654|ref|YP_878315.1| sun protein [Clostridium novyi NT]
gi|118135110|gb|ABK62154.1| sun protein [Clostridium novyi NT]
Length = 443
Score = 93.2 bits (230), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/256 (28%), Positives = 131/256 (51%), Gaps = 20/256 (7%)
Query: 38 LAQLLVRNKVKSI-EDLM-ALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDD 94
L +L++ I ED++ L + P V VRVN LK D D A L + + V++
Sbjct: 153 LVNMLIKQYGNEIAEDILKGLNERPAVT----VRVNNLKTDHDEAFSNLEEYGYDVEEGY 208
Query: 95 LVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVH 154
+ P+ +++ G + +PL G + +Q +++ +VA ++ K G VLD CSAPG KT H
Sbjct: 209 ICPEAIVINKGKSIEKNPLFKEGKITVQDESAMLVAPSIDAKEGATVLDLCSAPGGKTTH 268
Query: 155 LAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214
++ +M G + A ++++ ++ +K+ K G NI D + + +++ +L
Sbjct: 269 ISEIMNNTGIVKAFDIHENKLSLVKENAKRLGIDNISCAEMDASKFNKELENSADM--VL 326
Query: 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RV 273
+D CSG G ++ P +T D ++ + A QKK + +A + E +
Sbjct: 327 IDVPCSGLGIIRKK-----PEIK--YTKD---IKSTKDIVAIQKKIMENAAKYVKKEGTL 376
Query: 274 VYSTCSIHQVENEDVI 289
+YSTC+I++ ENE I
Sbjct: 377 LYSTCTINKEENEKNI 392
>gi|420206463|ref|ZP_14711973.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM008]
gi|394278302|gb|EJE22619.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM008]
Length = 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVATTVRANISRDSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGFGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|418613993|ref|ZP_13176983.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU118]
gi|374821862|gb|EHR85903.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU118]
Length = 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 37/299 (12%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V IE + Q+ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGIEKTEKIAQSFLEPVATTVRANISRGSIDSIISKLEQEGYQ 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ L +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGLPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ-LATPFPNGTAEASQFL 318
+ PG +VYSTC+I Q+ENE+VI + L F F+ + P + Q L
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFEPIQNPVTGEQVKTLQIL 416
>gi|418633997|ref|ZP_13196395.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU129]
gi|420177392|ref|ZP_14683728.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM057]
gi|420179235|ref|ZP_14685530.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM053]
gi|420189611|ref|ZP_14695579.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM037]
gi|420204139|ref|ZP_14709699.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM015]
gi|374837989|gb|EHS01546.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU129]
gi|394247776|gb|EJD93018.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM057]
gi|394254041|gb|EJD99023.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM053]
gi|394260946|gb|EJE05748.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM037]
gi|394274153|gb|EJE18578.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM015]
Length = 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 37/299 (12%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V IE + Q+ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGIEKTEKIAQSFLEPVATTVRANISRGSIDSIISKLEQEGYQ 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ L +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGLPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ-LATPFPNGTAEASQFL 318
+ PG +VYSTC+I Q+ENE+VI + L F F+ + P + Q L
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFEPIQNPVTGEQVKTLQIL 416
>gi|27467810|ref|NP_764447.1| RNA-binding Sun protein [Staphylococcus epidermidis ATCC 12228]
gi|293366818|ref|ZP_06613494.1| RNA methyltransferase Sun [Staphylococcus epidermidis
M23864:W2(grey)]
gi|417656552|ref|ZP_12306235.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU028]
gi|417658902|ref|ZP_12308515.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU045]
gi|417909812|ref|ZP_12553545.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU037]
gi|418605430|ref|ZP_13168755.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU041]
gi|418606347|ref|ZP_13169628.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU057]
gi|418609800|ref|ZP_13172934.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU065]
gi|418616486|ref|ZP_13179410.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU120]
gi|418622181|ref|ZP_13184937.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU123]
gi|418628991|ref|ZP_13191507.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU127]
gi|418664830|ref|ZP_13226296.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU081]
gi|419768657|ref|ZP_14294773.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
aureus subsp. aureus IS-250]
gi|419772571|ref|ZP_14298602.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
aureus subsp. aureus IS-K]
gi|420182887|ref|ZP_14689020.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM049]
gi|420187578|ref|ZP_14693598.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM039]
gi|420197109|ref|ZP_14702833.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM020]
gi|420202069|ref|ZP_14707664.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM018]
gi|420214303|ref|ZP_14719582.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH05005]
gi|420216133|ref|ZP_14721355.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH05001]
gi|420219998|ref|ZP_14724988.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH04008]
gi|420227008|ref|ZP_14731781.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH05003]
gi|420229330|ref|ZP_14734036.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH04003]
gi|420231689|ref|ZP_14736334.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH051668]
gi|27315354|gb|AAO04489.1|AE016746_279 RNA-binding Sun protein [Staphylococcus epidermidis ATCC 12228]
gi|291319119|gb|EFE59489.1| RNA methyltransferase Sun [Staphylococcus epidermidis
M23864:W2(grey)]
gi|329736213|gb|EGG72485.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU028]
gi|329736541|gb|EGG72807.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU045]
gi|341652421|gb|EGS76209.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU037]
gi|374402527|gb|EHQ73552.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU041]
gi|374406136|gb|EHQ77039.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU065]
gi|374408300|gb|EHQ79131.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU057]
gi|374410276|gb|EHQ81037.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU081]
gi|374820564|gb|EHR84640.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU120]
gi|374827556|gb|EHR91418.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU123]
gi|374834985|gb|EHR98616.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU127]
gi|383359198|gb|EID36628.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
aureus subsp. aureus IS-K]
gi|383359483|gb|EID36906.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
aureus subsp. aureus IS-250]
gi|394249350|gb|EJD94563.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM049]
gi|394256020|gb|EJE00956.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM039]
gi|394265916|gb|EJE10562.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM020]
gi|394270042|gb|EJE14565.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM018]
gi|394283668|gb|EJE27833.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH05005]
gi|394287005|gb|EJE30979.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH04008]
gi|394292583|gb|EJE36325.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH05001]
gi|394297509|gb|EJE41106.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH05003]
gi|394299096|gb|EJE42647.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH04003]
gi|394302231|gb|EJE45679.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH051668]
Length = 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVTTTVRANISRDSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|420165246|ref|ZP_14671950.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM088]
gi|394236413|gb|EJD81947.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM088]
Length = 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVTTTVRANISRDSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAQILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|448238022|ref|YP_007402080.1| ribosomal RNA small subunit methyltransferase F [Geobacillus sp.
GHH01]
gi|445206864|gb|AGE22329.1| ribosomal RNA small subunit methyltransferase F [Geobacillus sp.
GHH01]
Length = 454
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 31/268 (11%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
++ A+Y+ + +RVN LK D F + P P
Sbjct: 20 DEFFAVYENEKI---NGLRVNPLK--TDPGAWAKTAPFSLSPVPFCPTGFYYEPDQQPGK 74
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
HP G ++Q ++ VA AL P PG VLD C+APG KT L A+M+ KG +VA E+
Sbjct: 75 HPYHAAGLYYIQEPSAMAVAEALRPAPGETVLDLCAAPGGKTTQLGAMMENKGLLVANEI 134
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+ +RV+ L + ++ G N V++ L + P + + IL+D CSG G R D
Sbjct: 135 HPKRVKALAENVERFGLTNTVVVNETPEALAERFPGFFD--KILVDAPCSGEGMF--RKD 190
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENED 287
S S P +E + +A Q++ L A + G+ +VYSTC+ ENE
Sbjct: 191 EEAASFWS-----PAYVE---ECAARQRRILESAYAMLKEGGI--LVYSTCTFSPEENEQ 240
Query: 288 VIK---------SVLPIAMSFGFQLATP 306
I+ +LPIA + G + P
Sbjct: 241 TIEWLLEAHDDLRLLPIAKAGGLEPGRP 268
>gi|85819014|gb|EAQ40173.1| NOL1/NOP2/sun family protein [Dokdonia donghaensis MED134]
Length = 402
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 109/237 (45%), Gaps = 12/237 (5%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+R N+LK V L Q + K D PD L L ++ NG +Q +S
Sbjct: 153 LRANSLKATVKEVRNTLADQDIDTKILDTHPDALELVERKNVFTSEAFKNGFFEVQDASS 212
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
VA L +PG +V+DAC+ G KT+HLAALM+ KG+I+A ++ ++R LK K +G
Sbjct: 213 QKVARMLEVEPGMRVVDACAGAGGKTLHLAALMENKGQIIAMDIYAGKLRELKRRSKRAG 272
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
A NIE + K Y+ +L+D C+G GT D L D
Sbjct: 273 AHNIETREITSTKVFKK--LYNSADRVLIDAPCTGLGTIKRNPD--LKWKLQPEFVDKVV 328
Query: 247 MERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQL 303
+ + L + K ++VY+TCSI EN++ +++ L FQL
Sbjct: 329 QRQADILQNYSKIVKDGG-------KMVYATCSILPRENQEQVQAFLATEQGQKFQL 378
>gi|448608995|ref|ZP_21660274.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mucosum ATCC
BAA-1512]
gi|445747372|gb|ELZ98828.1| tRNA and rRNA cytosine-C5-methylase [Haloferax mucosum ATCC
BAA-1512]
Length = 313
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 32/260 (12%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
++D A + + P VRVNT+K V+ A L + V + D P +L L PG
Sbjct: 11 VDDEAAFLEACERSLPSVVRVNTIKTTVERAREALDDEGVAYEPTDWHPGILKLENSSPG 70
Query: 106 CDL-HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
+ + H G + Q + S++ A AL P+PG ++ D C+APG+KT +AA+M +G
Sbjct: 71 TNWPYFH-----GWLHGQEEVSALPAIALDPQPGERIWDTCAAPGSKTTQIAAMMDDEGV 125
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD---------PKDPAYSEVRAILL 215
++ + N R+ L+ + G N+ V + D N K ++ + +L+
Sbjct: 126 LIGNDNNLGRLSALRHNAERLGVTNLVVSNQDARNFSMKPFGERTPDKSGSFEQFDRVLV 185
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERV 273
D CS GT + D L D M + ++ QK LR A+ PG V
Sbjct: 186 DAPCSCEGTCRKNPDVL----------DEWTMNHVASVAGIQKGILRRAVQVTKPG-GTV 234
Query: 274 VYSTCSIHQVENEDVIKSVL 293
VYSTC+ ENE V+ VL
Sbjct: 235 VYSTCTFAPEENEAVLDFVL 254
>gi|261419971|ref|YP_003253653.1| RNA methylase [Geobacillus sp. Y412MC61]
gi|319766785|ref|YP_004132286.1| RNA methylase [Geobacillus sp. Y412MC52]
gi|261376428|gb|ACX79171.1| RNA methylase, NOL1/NOP2/sun family [Geobacillus sp. Y412MC61]
gi|317111651|gb|ADU94143.1| RNA methylase, NOL1/NOP2/sun family [Geobacillus sp. Y412MC52]
Length = 454
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 31/268 (11%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
++ A+Y+ + +RVN LK D F + P P
Sbjct: 20 DEFFAVYENEKI---NGLRVNPLK--TDPGAWAKTAPFSLSPVPFCPTGFYYEPDEQPGK 74
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
HP G ++Q ++ VA AL P PG VLD C+APG KT L A+M+ KG +VA E+
Sbjct: 75 HPYHAAGLYYIQEPSAMAVAEALRPAPGETVLDLCAAPGGKTTQLGAMMENKGLLVANEI 134
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+ +RV+ L + ++ G N V++ L + P + + IL+D CSG G R D
Sbjct: 135 HPKRVKALAENVERFGLTNTVVVNETPEALAERFPGFFD--KILVDAPCSGEGMF--RKD 190
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENED 287
S S P +E + +A Q++ L A + G+ +VYSTC+ ENE
Sbjct: 191 EEAASFWS-----PAYVE---ECAARQRRILESAYAMLKEGGI--LVYSTCTFSPEENEQ 240
Query: 288 VIK---------SVLPIAMSFGFQLATP 306
I+ +LPIA + G + P
Sbjct: 241 TIEWLLEAHDDLRLLPIAKAGGLEPGQP 268
>gi|117920752|ref|YP_869944.1| Fmu (Sun) domain-containing protein [Shewanella sp. ANA-3]
gi|117613084|gb|ABK48538.1| Fmu (Sun) domain protein [Shewanella sp. ANA-3]
Length = 404
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 78/238 (32%), Positives = 112/238 (47%), Gaps = 22/238 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
P R++RVN LK+ D +L +FV Q + V L + L +G
Sbjct: 149 TPPKRFLRVNGLKVTRDDLAQKLAAEFVTTQAVEGVDSALEVTSDSALFRTNCFKDGLFE 208
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S VAAAL KPG +V+DAC+ G KT+H+AA M+GKG+++A ++ + ++ LK+
Sbjct: 209 QQDAGSQRVAAALDAKPGMRVIDACAGAGGKTLHIAAQMQGKGRLLAMDVEQWKLDNLKE 268
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA--ILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA NIE L + K ++ A +LLD CSG G D A
Sbjct: 269 RARRNGAHNIETR----LIVGSKTIKRLKLSADRVLLDVPCSGLGVLKRNPDAKWRDTA- 323
Query: 239 GHTADPTEMERLNKLSAFQKKAL---RHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
ERL L QK L + G+ VVY+TCSI EN + + L
Sbjct: 324 ---------ERLPVLMELQKHILSSYSRMVKVGGI--VVYATCSIFPCENRGQVDAFL 370
>gi|118573083|sp|Q3KNT7.1|NSN5B_HUMAN RecName: Full=Putative NOL1/NOP2/Sun domain family member 5B;
AltName: Full=Williams-Beuren syndrome chromosomal
region 20B protein
gi|76825358|gb|AAI07113.1| NSUN5B protein [Homo sapiens]
Length = 163
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 8/108 (7%)
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
G + E+ DFL + P DP Y EV +LLDPSCSGSG + +L+ T P
Sbjct: 9 GVSCCELAEEDFLAVSPLDPRYREVHYVLLDPSCSGSGMPSRQLED-----PGAGTPSPV 63
Query: 246 EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
RL+ L+ FQ++AL HAL+FP ++R+VYS CS+ Q ENED++ L
Sbjct: 64 ---RLHALAGFQQRALCHALTFPSLQRLVYSMCSLCQEENEDMVPDAL 108
>gi|87303174|ref|ZP_01085972.1| Sun protein (Fmu protein) [Synechococcus sp. WH 5701]
gi|87282341|gb|EAQ74301.1| Sun protein (Fmu protein) [Synechococcus sp. WH 5701]
Length = 447
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 81/256 (31%), Positives = 120/256 (46%), Gaps = 32/256 (12%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKD--DLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
+RVN L+ + + L V + DL L + DL P G +Q +
Sbjct: 198 LRVNHLRASREGVIEALAAAGVSAEPLPDLPWGLSLGGRSGDLRALPGYDEGHWSVQDRT 257
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ M+A L P+PG ++LDAC+APG K+ HLA L+ G +VA + ++ R+RRL+D +
Sbjct: 258 AQMIAPLLDPQPGERLLDACAAPGGKSTHLAELIGDAGTVVAVDRSEGRLRRLRDNARRL 317
Query: 186 GAANIEVLHGD-FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD---HLLPSHASGHT 241
G IE L D + P + ILLD CSG GT A D + P+
Sbjct: 318 GLNAIEPLTADAAITGAIGGPPFDR---ILLDAPCSGLGTLARHPDARWRITPAS----- 369
Query: 242 ADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
++ L A Q+ L L P R+VY+TC++H EN +I S L A
Sbjct: 370 --------ISDLVALQRSLLEAMLPLLVP-AGRLVYATCTVHPSENSALIASFL--AQHS 418
Query: 300 GFQLAT-----PFPNG 310
G++L + P P+G
Sbjct: 419 GWRLLSQQQHWPAPHG 434
>gi|336255572|ref|YP_004598679.1| RNA methylase, NOL1/NOP2/sun family [Halopiger xanaduensis SH-6]
gi|335339561|gb|AEH38800.1| RNA methylase, NOL1/NOP2/sun family [Halopiger xanaduensis SH-6]
Length = 302
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/251 (29%), Positives = 117/251 (46%), Gaps = 23/251 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLIL---PPG 105
I+D A ++ + P VRVNT+K V+ + L ++ V ++ D P +L L PG
Sbjct: 11 IDDFDAFFEACERPLGNAVRVNTIKASVERTLAALEREDVGYEQADWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K +AALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPVVLDPRPGERVWDCCAAPGGKATQIAALMDDEGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N + ++ E L+D C+ GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATSLAVTNEDARNYSLQRFSFDEFDRALVDAPCTCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP---GVERVVYSTCSIHQ 282
+ D L D + + +S QK LR A+ G VVYSTC+
Sbjct: 187 RKNPDAL----------DNWSEDAIASVSGIQKGILRRAVQATREGGT--VVYSTCTFAP 234
Query: 283 VENEDVIKSVL 293
ENE V++ +
Sbjct: 235 EENEAVVQHAI 245
>gi|420234376|ref|ZP_14738940.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH051475]
gi|394304338|gb|EJE47744.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH051475]
Length = 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVTTTVRANISRDSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|251810647|ref|ZP_04825120.1| rRNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|282876351|ref|ZP_06285218.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis SK135]
gi|417913398|ref|ZP_12557065.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU109]
gi|418624473|ref|ZP_13187148.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU125]
gi|420169761|ref|ZP_14676339.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM070]
gi|420172783|ref|ZP_14679281.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM067]
gi|420194045|ref|ZP_14699874.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM021]
gi|420209504|ref|ZP_14714941.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM003]
gi|421607281|ref|ZP_16048527.1| 16S rRNA methyltransferase B [Staphylococcus epidermidis AU12-03]
gi|251805807|gb|EES58464.1| rRNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
BCM-HMP0060]
gi|281295376|gb|EFA87903.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis SK135]
gi|341655680|gb|EGS79404.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU109]
gi|374827702|gb|EHR91563.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU125]
gi|394241460|gb|EJD86874.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM067]
gi|394243061|gb|EJD88435.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM070]
gi|394266743|gb|EJE11368.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM021]
gi|394278951|gb|EJE23263.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM003]
gi|406657073|gb|EKC83466.1| 16S rRNA methyltransferase B [Staphylococcus epidermidis AU12-03]
Length = 435
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVTTTVRANISRDSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|282882115|ref|ZP_06290756.1| ribosomal RNA small subunit methyltransferase B [Peptoniphilus
lacrimalis 315-B]
gi|281298145|gb|EFA90600.1| ribosomal RNA small subunit methyltransferase B [Peptoniphilus
lacrimalis 315-B]
Length = 430
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/246 (32%), Positives = 117/246 (47%), Gaps = 25/246 (10%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHP 112
L A Q PD +RVNTLK D L + D LVPD LI+ ++
Sbjct: 168 LKANNQEPDFV----IRVNTLKTKKDHLYKLLKDENFNVIDGLVPDSLIIENPKNIFDTQ 223
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
G + Q +S V+ L PK +LD C+APG K+ HL A+++ G+IVAC+ +
Sbjct: 224 AFREGFFYAQDFSSIKVSQILNPKKNSTILDLCAAPGGKSTHLGAILENTGQIVACDKSL 283
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDF--LNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
++ +KD K G +NI+V D N D +D + L+D CS G ++ D
Sbjct: 284 YKLDLIKDNAKRLGVSNIKVSINDASKYNNDFED----KFDYCLVDAPCSAIGLYRKKPD 339
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENED 287
+ + S +E + L+ QK + +A + GV ++YSTCS+ ENE
Sbjct: 340 --IKWNRS--------LEDIKNLAQIQKNIINNAGRYVKKGGV--LIYSTCSLSYSENEG 387
Query: 288 VIKSVL 293
VIK L
Sbjct: 388 VIKEFL 393
>gi|50121390|ref|YP_050557.1| rRNA (cytosine-C(5)-)-methyltransferase RsmF [Pectobacterium
atrosepticum SCRI1043]
gi|81827103|sp|Q6D4C8.1|RSMF_ERWCT RecName: Full=Ribosomal RNA small subunit methyltransferase F;
AltName: Full=16S rRNA m5C1407 methyltransferase;
AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase
RsmF
gi|49611916|emb|CAG75365.1| conserved hypothetical protein [Pectobacterium atrosepticum
SCRI1043]
Length = 484
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 89/272 (32%), Positives = 128/272 (47%), Gaps = 46/272 (16%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDL 108
S+ED +A Q P R +RVNTLK+ VD A L+L + + Q + + P C
Sbjct: 26 SMEDFIAACQRP---LRRSIRVNTLKISVD-AFLQLAQPYGWQLEPI--------PWCQE 73
Query: 109 HVHPLI--------------VNGCVFLQGKASSMVAAAL---APKPGWKVLDACSAPGNK 151
L ++G ++Q +S + A+AL PG +LD +APG+K
Sbjct: 74 GFWLLNAEEENTRLGNTLEHLSGLFYIQEASSMLPASALFHHNDAPG-TILDVAAAPGSK 132
Query: 152 TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 211
T +AA + +G IVA E + RV+ L I G +N + H D P Y +
Sbjct: 133 TTQIAARLNNEGAIVANEYSASRVKVLHANISRCGVSNTAITHFDGRVFGAALPEYFD-- 190
Query: 212 AILLDPSCSGSGTAAERLDHLLPSHASGHT-ADPTEMERLNKLSAFQKKALRHALSFPGV 270
AILLD CSG G R D SH S + D +R LSAF HAL GV
Sbjct: 191 AILLDAPCSGEGVV--RKDPAAMSHWSQESITDIAATQRDLILSAF------HALKPGGV 242
Query: 271 ERVVYSTCSIHQVENEDV---IKSVLPIAMSF 299
++YSTC++++ EN+ V +++ P A F
Sbjct: 243 --MIYSTCTLNRQENQQVCRWLQAQFPDACEF 272
>gi|315646179|ref|ZP_07899299.1| sun protein [Paenibacillus vortex V453]
gi|315278378|gb|EFU41694.1| sun protein [Paenibacillus vortex V453]
Length = 460
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 84/298 (28%), Positives = 140/298 (46%), Gaps = 42/298 (14%)
Query: 1 MEEARRIGL-HTNLRHPLWPVGDAEKFLMLHKGAIQLALAQLLVRNKVKSIEDLMALYQT 59
M ARRI L H+ HP W V E+++ + E A+
Sbjct: 148 MPAARRISLLHS---HPQWLV---ERWIAQY------------------GTEATEAICAA 183
Query: 60 PDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGC 118
+ P VRVNT + + + +G + L P +++ ++ + +G
Sbjct: 184 NNEPPAVSVRVNTTMISREEMLKLMGSHGLDATPSPLSPYGIVVKGAGNMALTDWYRDGL 243
Query: 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL 178
+ +Q ++S +VA A+ P+PG +VLD C+APG K+ H+ LMK +G I+A +++ + + +
Sbjct: 244 ISIQDESSMLVAEAIQPEPGMRVLDCCAAPGGKSAHMGELMKDEGSIIANDIHTHKGKLI 303
Query: 179 KDTIKLSGAANIEVLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
D G +I + GD L+L D +PA + ILLD CSG G + P
Sbjct: 304 SDQASRLGLDSIMTVTGDALDLADRFEPASFD--RILLDAPCSGLGVIRRK-----PDLK 356
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
G + E + +++A Q + L S PG +VYSTC++ +ENE V+ + L
Sbjct: 357 WGKSE-----EDIAEIAALQLRLLESVSSLLRPG-GILVYSTCTMEPLENEGVVSAFL 408
>gi|295133869|ref|YP_003584545.1| ribosomal RNA small subunit methyltransferase B [Zunongwangia
profunda SM-A87]
gi|294981884|gb|ADF52349.1| ribosomal RNA small subunit methyltransferase B [Zunongwangia
profunda SM-A87]
Length = 411
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 119/243 (48%), Gaps = 18/243 (7%)
Query: 65 PRYVRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P +RVNTLK D+ + +L G + + KD P L L ++ NG +
Sbjct: 151 PVIIRVNTLKTDIQTLQQKLKDEGFETINLKD--YPYALQLVERANIFKTESFQNGLFEV 208
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q +S +VA L KPG +V+D C+ G K++HLAALM+ KG+++A ++ +++ LK
Sbjct: 209 QDASSQLVADFLDVKPGDRVVDTCAGAGGKSLHLAALMENKGQVIALDIYGNKLKELKRR 268
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
K +GA NIE D N + + +L+D CSG G + D +
Sbjct: 269 AKRAGAHNIETRVID--NNKAIKKLHGKADKVLIDAPCSGLGVLSRNPD-------AKWK 319
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
+P ++R+ K Q++ +R E ++VY+TCS+ EN+ +K L
Sbjct: 320 LEPEFLDRIRKT---QQEIIRQYCKIVKKEGKMVYATCSVLPSENQLQVKDFLASEEGKD 376
Query: 301 FQL 303
F+L
Sbjct: 377 FKL 379
>gi|317129258|ref|YP_004095540.1| sun protein [Bacillus cellulosilyticus DSM 2522]
gi|315474206|gb|ADU30809.1| sun protein [Bacillus cellulosilyticus DSM 2522]
Length = 449
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 120/228 (52%), Gaps = 22/228 (9%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVN L V+ + L + + ++ +P+ +++ G ++ P V+G + +Q + S
Sbjct: 183 VRVNELNASVEEVIAALKNEGIEAEQSKNIPESVLIYKGSVINTKPF-VDGWITVQDEGS 241
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+VA AL+PK +VLDAC+APG K+ H+A MK G+IV+ +++K +V ++ K
Sbjct: 242 MLVAHALSPKENERVLDACAAPGGKSTHIAEKMKNSGQIVSLDIHKHKVGLIEKNAK--- 298
Query: 187 AANIEVLHGDFLNLDPKDPAYSE--VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP 244
N+ +++ + L+ + E IL+D CSG G + D L S G
Sbjct: 299 RLNLSIINTEQLDARQVSGQFEEHSFDRILVDAPCSGLGVIQRKPD-LKWSKNEGD---- 353
Query: 245 TEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVI 289
+N+L+ Q + L +P +++ +VYSTC++ + EN +VI
Sbjct: 354 -----INRLAQIQTEILEAV--WPLLKKGGTLVYSTCTVDKEENNEVI 394
>gi|85858797|ref|YP_460999.1| 16S rRNA m(5)C 967 methyltransferase [Syntrophus aciditrophicus SB]
gi|85721888|gb|ABC76831.1| 16S rRNA m(5)C 967 methyltransferase [Syntrophus aciditrophicus SB]
Length = 471
Score = 92.8 bits (229), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/250 (32%), Positives = 116/250 (46%), Gaps = 31/250 (12%)
Query: 54 MALYQTPDVPKPRYVRVNTLKMDVDS--AVLELGKQFVVQKDDLVPD-LLILPPGCDLHV 110
MA Q P P +RVN+LK D + +LE + F V + PD LLI P L +
Sbjct: 195 MANNQVP----PVAIRVNSLKADRSTLKEILE-HEGFTVSESSFSPDALLITDPPRHLRL 249
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
G LQ +AS ++ +AP G +LD C G KT HLA+LM +G+I+A +L
Sbjct: 250 TSTSREGLFILQDEASQLIGRLVAPAAGEAILDVCCGTGVKTTHLASLMSNQGRILAVDL 309
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE--- 227
++ L G +NIE+ D ++ + + IL+D CSG GT
Sbjct: 310 YPAKLEALNRLSSRMGISNIEIRQADASTMEDETAFRNMFDRILVDAPCSGLGTLRRNPE 369
Query: 228 ---RLD-HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQV 283
RL LPS++ + + LN+ +AF + G +VYSTC+I
Sbjct: 370 IKWRLQPRALPSYSR------LQEQILNRAAAFLHRG--------GC--LVYSTCTILPE 413
Query: 284 ENEDVIKSVL 293
ENE +I L
Sbjct: 414 ENELLIGKFL 423
>gi|209524134|ref|ZP_03272685.1| sun protein [Arthrospira maxima CS-328]
gi|376004062|ref|ZP_09781832.1| Ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Arthrospira sp. PCC
8005]
gi|423066085|ref|ZP_17054875.1| sun protein [Arthrospira platensis C1]
gi|209495509|gb|EDZ95813.1| sun protein [Arthrospira maxima CS-328]
gi|375327556|emb|CCE17585.1| Ribosomal RNA small subunit methyltransferase B (rRNA
(cytosine-C(5)-)-methyltransferase) [Arthrospira sp. PCC
8005]
gi|406712424|gb|EKD07610.1| sun protein [Arthrospira platensis C1]
Length = 458
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 60/179 (33%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 175
G +Q ++ +V + P+PG ++DAC+APG KT H+A LM GKI+A + + R+
Sbjct: 238 QGWWTVQDASAQLVGYVVDPQPGEIIIDACAAPGGKTTHIAELMGDNGKIIAIDRSPGRL 297
Query: 176 RRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLP 234
+ L+ IK +I+V GD + P Y+ +LLD CSG GT R D
Sbjct: 298 KPLQQNIKRLKLRSIQVEVGDSRHF----PQYNNTADRVLLDAPCSGGGTLHRRSD---- 349
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
+ P ++ +L++L A + + H + GV +VY+TC++H ENE I S L
Sbjct: 350 ---ARWRQTPDQIRQLSQLQAELLEMVSHWVKPGGV--LVYATCTLHPQENEWAIASFL 403
>gi|384252054|gb|EIE25531.1| NOL1/NOP2/sun family putative RNA met [Coccomyxa subellipsoidea
C-169]
Length = 461
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 127/272 (46%), Gaps = 35/272 (12%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLI 101
S+ + + L + + +P +R NTLK + EL + + +L P L++
Sbjct: 90 SVAEALELVEANEGRRPITLRTNTLK----TRRRELAAALINRGVNLDPIGKWSKVGLVV 145
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ P + G LQG +S + ALAP+ G +VLD +APG KT ++AALM+
Sbjct: 146 YESNVPVGATPEYMAGHYMLQGASSFLPVMALAPQEGEQVLDMAAAPGGKTTYIAALMRN 205
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
G + A E+N R++ ++ ++ G N V + D +L PK + V LLD CSG
Sbjct: 206 SGIVFANEVNPLRLKSIQGNLQRMGVTNTIVSNYDGRDL-PKMMGTNSVDRALLDAPCSG 264
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYS 276
+G ++ D + ++ S + K + QK+ L A+ +VYS
Sbjct: 265 TGVVSK--DPTVKANKS--------QAEIWKCAHLQKQLLLAAIDLVDAGSKTGGYIVYS 314
Query: 277 TCSIHQVENEDVIKSVL--------PIAMSFG 300
TCSI ENE+V+ VL P + FG
Sbjct: 315 TCSIMVEENENVVNYVLRKRHVKVVPTGLDFG 346
>gi|401565870|ref|ZP_10806681.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
FOBRC6]
gi|400183501|gb|EJO17754.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
FOBRC6]
Length = 448
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 22/268 (8%)
Query: 46 KVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPG 105
+ E AL + P VRVNTL++D L L +QF + P G
Sbjct: 166 RAYGYERTEALCLCNNTSAPLSVRVNTLRIDR----LALMEQFAAAGAKARASRWV-PDG 220
Query: 106 CDLHVH------PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM 159
LH H P + G +Q ++S +VA L +PG V+D+C+APG KT H+A M
Sbjct: 221 IVLHAHGALDDLPPLRAGLAQVQDESSMLVAHVLGAEPGMTVIDSCAAPGGKTTHIAQRM 280
Query: 160 KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219
+ +G+I+A ++ +E++RR++ + G + IE D + ++ +L+D C
Sbjct: 281 ENRGRILAFDIYEEKIRRIEQNARRLGISIIEAQMRDAREIGAAYEGIAD--RVLVDAPC 338
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCS 279
SG G + D A P ++R SA + A+ GV +VYSTC+
Sbjct: 339 SGLGVLRRKPDARWKKSAPDRKTLPP-IQRAILASAAR------AVKAGGV--LVYSTCT 389
Query: 280 IHQVENEDVIKSVLPIAMSFGFQLATPF 307
+ + EN V++ L F + F
Sbjct: 390 MEECENAAVVQDFLRAHPHFTLEQTGAF 417
>gi|375008835|ref|YP_004982468.1| RNA methylase, NOL1/NOP2/sun [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287684|gb|AEV19368.1| RNA methylase, NOL1/NOP2/sun [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 454
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 121/268 (45%), Gaps = 31/268 (11%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
++ A+Y+ + +RVN LK D F + P P
Sbjct: 20 DEFFAVYENEKI---NGLRVNPLK--TDPGAWAKTAPFSLSPVPFCPTGFYYEPDEQPGK 74
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
HP G ++Q ++ VA AL P PG +VLD C+APG KT L A+M+ KG +VA E+
Sbjct: 75 HPYHTAGLYYIQEPSAMAVAEALRPAPGERVLDLCAAPGGKTTQLGAMMENKGLLVANEI 134
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD 230
+ +RV+ L + ++ G N V++ L + P + + IL+D CSG G R D
Sbjct: 135 HPKRVKALAENVERFGLTNTVVVNETPEALAEQFPGFFD--KILVDAPCSGEGMF--RKD 190
Query: 231 HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENED 287
S S P +E + +A Q++ L A + G+ +VYSTC+ ENE
Sbjct: 191 EEAASFWS-----PAYVE---ECAARQRRILESAYAMLKEGGI--LVYSTCTFSPEENEQ 240
Query: 288 VIK---------SVLPIAMSFGFQLATP 306
I+ +LPIA G + P
Sbjct: 241 TIEWLLETYEDLQLLPIAKIGGIEPGRP 268
>gi|65321192|ref|ZP_00394151.1| COG0144: tRNA and rRNA cytosine-C5-methylases [Bacillus anthracis
str. A2012]
Length = 444
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 121/248 (48%), Gaps = 15/248 (6%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPG 105
+++ E + + P VP RVN K+ V+ A+ L + + ++ DL D + + G
Sbjct: 161 LETAEKMCEVNMLPPVPT---ARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIXKG 217
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
H G + +Q ++S +VA AL P G +LD+C+APG KT H+A +KG G++
Sbjct: 218 NVAHTDAF-KKGFLSIQDESSMLVARALEPDEGDVILDSCAAPGGKTTHIAERLKGTGQV 276
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
++ +L+ +VR +K + N+E D + + A IL+D CSG G
Sbjct: 277 MSLDLHAHKVRLIKQQAERLXLENVETKALDARKVQ-EHFANEXFDKILVDAPCSGFGVI 335
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L D + ERL+ + + L G R+VYSTC+I ++EN
Sbjct: 336 RRKPDIKLGK-------DKGDSERLSMIQFAILEKXAPLLKQGG--RLVYSTCTIEKIEN 386
Query: 286 EDVIKSVL 293
E VI+ L
Sbjct: 387 EQVIERFL 394
>gi|410028356|ref|ZP_11278192.1| tRNA/rRNA cytosine-C5-methylase [Marinilabilia sp. AK2]
Length = 414
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 26/244 (10%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKDDLVP----DLLILPPGCDLHVHPLIVNGCVFLQG 123
+RVNTLK+ + + L + + + P D L+L ++ HP G +Q
Sbjct: 163 IRVNTLKISREDLMNRLAQDGI---ETYAPKGYKDALVLAKRQNIFKHPAFKEGLFEVQD 219
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
+S +VAAAL +PG +V+DAC+ G K++HLAALM+ KG+I++ ++ +++ K +
Sbjct: 220 ASSQLVAAALEVEPGMRVIDACAGAGGKSLHLAALMENKGRILSMDVEGWKLQNTKLRAR 279
Query: 184 LSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
+G + IE V+ G+ K+ A +LLD CSG G D T
Sbjct: 280 RNGVSIIEPRVIEGNKTIKRLKESA----DRVLLDVPCSGLGVLKRNPD----------T 325
Query: 242 ADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
E + K+ Q++ L++ S PG +VY+TCSI EN+ ++ L
Sbjct: 326 KWKLSPESIEKVQVIQQEILQNYASMVKPG-GLLVYATCSILPSENQQQVEKFLASEKGK 384
Query: 300 GFQL 303
GF+L
Sbjct: 385 GFEL 388
>gi|335438273|ref|ZP_08561021.1| RNA methylase, NOL1/NOP2/sun family protein [Halorhabdus tiamatea
SARL4B]
gi|334892467|gb|EGM30700.1| RNA methylase, NOL1/NOP2/sun family protein [Halorhabdus tiamatea
SARL4B]
Length = 302
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/248 (33%), Positives = 115/248 (46%), Gaps = 17/248 (6%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLH 109
+ED A P P VRVNTLK V+ A L + + + D L+ P
Sbjct: 11 LEDPAAFRSACRRPLPSVVRVNTLKTTVERAKAALETEGIAYEAVEWHDGLLRLPDDSPG 70
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
+ V G + Q + S++ L P PG +V DA +APG+KT LAALM +G IVA +
Sbjct: 71 SNWPYVQGWLHGQEEVSALPPVVLDPSPGDRVWDATAAPGSKTTQLAALMHDEGTIVATD 130
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLN--LDPKDPAYSEVRAILLDPSCSGSGTAAE 227
N R+ L+ + G N+ V + D N L P D A + L+D CS GT +
Sbjct: 131 NNLGRLSALRSNAERLGVTNLAVTNEDARNHSLKPFDGA--QYDHALVDVPCSCEGTIRK 188
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVEN 285
D L D ++ + +++ QK LR A+ PG VVYSTC+ EN
Sbjct: 189 NPDTL----------DEWSLDHVAGIASAQKGILRRAIEVTEPG-GTVVYSTCTFAPEEN 237
Query: 286 EDVIKSVL 293
E V+ L
Sbjct: 238 EAVLDFAL 245
>gi|357012410|ref|ZP_09077409.1| 16S rRNA methyltransferase B [Paenibacillus elgii B69]
Length = 494
Score = 92.4 bits (228), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 134/272 (49%), Gaps = 17/272 (6%)
Query: 35 QLALAQ----LLVRNKVKSIEDLMA--LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ- 87
++ALAQ LVR+ V+ + A L + + +R N LK+ L +
Sbjct: 190 RIALAQSHPEWLVRHWVREFGERTAERLCEANNTSPRVSLRANGLKLGPGELAERLRQGG 249
Query: 88 FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSA 147
+ + P +I+ G ++ + P G +Q ++S +VA + P+PG +VLD C+A
Sbjct: 250 LEAEPSAVAPAGVIVRGGGNMALSPDYAAGLYSVQDESSMLVAEWVDPQPGERVLDCCAA 309
Query: 148 PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 207
PG KT HLA M +G+IVAC++++ + + +++ + +I L D L
Sbjct: 310 PGGKTTHLAEKMGDRGEIVACDVHEHKRKLIEEQAERLALRSIRTLTADARRLAEHFAPE 369
Query: 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 267
S R ILLD CSG G + D + S + A+ +++R L A H L
Sbjct: 370 SFDR-ILLDAPCSGLGVIRRKPD-MKWSKSEAELAEICDIQR-ELLEAV------HPLLK 420
Query: 268 PGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
PG +VYSTC++ + ENED+I++ L SF
Sbjct: 421 PG-GILVYSTCTVEKAENEDMIRAFLERHPSF 451
>gi|57866755|ref|YP_188366.1| sun protein [Staphylococcus epidermidis RP62A]
gi|242242499|ref|ZP_04796944.1| rRNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
W23144]
gi|418327694|ref|ZP_12938836.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis 14.1.R1.SE]
gi|418612965|ref|ZP_13175986.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU117]
gi|418626770|ref|ZP_13189366.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU126]
gi|418631938|ref|ZP_13194382.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU128]
gi|420175015|ref|ZP_14681460.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM061]
gi|420192761|ref|ZP_14698618.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM023]
gi|57637413|gb|AAW54201.1| sun protein [Staphylococcus epidermidis RP62A]
gi|242234073|gb|EES36385.1| rRNA (cytosine-5-)-methyltransferase [Staphylococcus epidermidis
W23144]
gi|365232724|gb|EHM73710.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis 14.1.R1.SE]
gi|374817275|gb|EHR81460.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU117]
gi|374831314|gb|EHR95056.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU126]
gi|374833607|gb|EHR97282.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU128]
gi|394244301|gb|EJD89646.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM061]
gi|394260577|gb|EJE05386.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM023]
Length = 435
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/299 (29%), Positives = 140/299 (46%), Gaps = 37/299 (12%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V IE + Q+ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGIEKTENIAQSFLEPVATTVRANISRGSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ L +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGLPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ-LATPFPNGTAEASQFL 318
+ PG +VYSTC+I Q+ENE+VI + L F F+ + P + Q L
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFEPIQNPVTGEQVKTLQIL 416
>gi|302824271|ref|XP_002993780.1| hypothetical protein SELMODRAFT_137586 [Selaginella moellendorffii]
gi|300138376|gb|EFJ05146.1| hypothetical protein SELMODRAFT_137586 [Selaginella moellendorffii]
Length = 476
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
LI G +Q ++ +V L P+PG V+D C+APG K++++A+ +KGKGK++A ++NK
Sbjct: 259 LIQQGRCTVQDESGGLVVELLDPQPGDLVIDCCAAPGGKSLYIASRLKGKGKVIAVDINK 318
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV---RAILLDPSCSGSGTAAERL 229
R++ LKD+ K +G + ++ N+D +D + +LLD CSG G ++R
Sbjct: 319 ARLQLLKDSAKKAGVSEQVSVY----NVDARDMIRGKTGLADRVLLDAPCSGLGVLSKRA 374
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENED 287
D +E +L+ Q + L A PG +VYSTCSI EN D
Sbjct: 375 DLRWRRT----------LESFEELTKLQDELLDGACKMVRPG-GVLVYSTCSIEPDENID 423
Query: 288 VIKSVLPIAMSF 299
I S L +F
Sbjct: 424 RITSFLARNQNF 435
>gi|302823170|ref|XP_002993239.1| hypothetical protein SELMODRAFT_136794 [Selaginella moellendorffii]
gi|300138909|gb|EFJ05660.1| hypothetical protein SELMODRAFT_136794 [Selaginella moellendorffii]
Length = 476
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 64/192 (33%), Positives = 100/192 (52%), Gaps = 20/192 (10%)
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
LI G +Q ++ +V L P+PG V+D C+APG K++++A+ +KGKGK++A ++NK
Sbjct: 259 LIQQGRCTVQDESGGLVVELLDPQPGDLVIDCCAAPGGKSLYIASRLKGKGKVIAVDINK 318
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV---RAILLDPSCSGSGTAAERL 229
R++ LKD+ K +G + ++ N+D +D + +LLD CSG G ++R
Sbjct: 319 ARLQLLKDSAKKAGVSEQVSVY----NVDARDMIRGKTGLADRVLLDAPCSGLGVLSKRA 374
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENED 287
D +E +L+ Q + L A PG +VYSTCSI EN D
Sbjct: 375 DLRWRRT----------LESFEELTKLQDELLDGACKMVRPG-GVLVYSTCSIEPDENID 423
Query: 288 VIKSVLPIAMSF 299
I S L +F
Sbjct: 424 RITSFLARNQNF 435
>gi|383754590|ref|YP_005433493.1| putative ribosomal RNA small subunit methyltransferase B
[Selenomonas ruminantium subsp. lactilytica TAM6421]
gi|381366642|dbj|BAL83470.1| putative ribosomal RNA small subunit methyltransferase B
[Selenomonas ruminantium subsp. lactilytica TAM6421]
Length = 444
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 124/245 (50%), Gaps = 20/245 (8%)
Query: 68 VRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
VR NTLK D + +A+ E G + VQ+ P+ + + L + G +Q +
Sbjct: 183 VRTNTLKTDRAALLTALQEAGAE--VQESQWTPEGIRVTSHGALDDLAPLQEGLCQVQDE 240
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
+S +VA + P+PG ++D CSAPG KT H+AALMK +G+IVA ++ + ++ R+++ +
Sbjct: 241 SSMLVAHVVDPQPGELIIDCCSAPGGKTTHMAALMKNEGRIVAGDIYEHKLTRIEENAQR 300
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLPSHASGHTA- 242
G I+++ + ++ Y ++ +L+D CSG G + D A A
Sbjct: 301 LG---IDIIETNLIDAREIGEEYEDMADRVLVDAPCSGLGVLRRKPDARWNKSAEEIAAL 357
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQ 302
P + E L+ + AL GV +VYSTC+I + EN++V+++ L F +
Sbjct: 358 PPLQGEILDSAA--------KALKAGGV--LVYSTCTIDRSENDEVVEAFLARHPEFTLE 407
Query: 303 LATPF 307
F
Sbjct: 408 QTGAF 412
>gi|375091698|ref|ZP_09737986.1| ribosomal RNA small subunit methyltransferase B [Helcococcus kunzii
ATCC 51366]
gi|374562585|gb|EHR33912.1| ribosomal RNA small subunit methyltransferase B [Helcococcus kunzii
ATCC 51366]
Length = 422
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/236 (26%), Positives = 117/236 (49%), Gaps = 28/236 (11%)
Query: 68 VRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+RVNT D + + L K+++V+K D+ D LI+ ++ G +Q ++S
Sbjct: 171 IRVNTFLTDKEQLINRLEKKEYIVEKSDVSKDCLIIKNPINMTEIEEFKEGLFTIQDQSS 230
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+V+ L PK VLD C+APG+K+ HL +M GK+VA ++ K+++ ++KD +
Sbjct: 231 ILVSEILNPKENSSVLDLCAAPGSKSTHLLQIMNNNGKVVANDIAKDKLDKIKDNFERLQ 290
Query: 187 AANIEVLHGD-------FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
+N E+ + D F++ + +L+D CSG G + P
Sbjct: 291 LSNFELTNYDAQKTIKQFID---------KFDYVLVDAPCSGLGVIKRK-----PEIKLN 336
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLP 294
+ D ++ LN++ Q + + + + V R+VYSTC++ + EN D++ +
Sbjct: 337 KSID--DIMSLNRI---QNEIIEQSYKYLKVGGRLVYSTCTLGRKENIDIVNDFIS 387
>gi|239636304|ref|ZP_04677306.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
warneri L37603]
gi|239597659|gb|EEQ80154.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
warneri L37603]
Length = 435
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 140/293 (47%), Gaps = 22/293 (7%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + LV + V +E A+ Q+ P VR N + +D+ + L K+ +
Sbjct: 142 AIQYSLPKWLVDHWVTHYGLEQTEAIAQSFLEPVATTVRANITRGSIDNIISALEKENYT 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
V++DD++P L + G + +G V +Q K+S VA + VLDACSAPG
Sbjct: 202 VERDDVLPFCLHIS-GKPIVNSRAFKDGLVSIQDKSSMFVAHIMGLNRDDSVLDACSAPG 260
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
K H+A ++ +G + A +++ +++ + I+ NI+ D P ++
Sbjct: 261 GKACHIAEILSPEGHVDATDIHDHKIKLIDFNIRKLRLKNIKAYQH-----DATKPYNNQ 315
Query: 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269
IL+D CSG G + + +T ++ L +L + ++H + PG
Sbjct: 316 YDKILVDAPCSGFGVLRHKPE-------IKYTQSKNSIQSLVELQLQILENVKHNVK-PG 367
Query: 270 VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLKAL 321
++YSTC+I Q+ENE+V+ + L F F+ PF + T E + L+
Sbjct: 368 -GSIIYSTCTIEQMENENVVYTFLKQNKDFEFE---PFQHPMTGEMVKILQVF 416
>gi|303232029|ref|ZP_07318732.1| ribosomal RNA small subunit methyltransferase B [Veillonella
atypica ACS-049-V-Sch6]
gi|429759370|ref|ZP_19291869.1| ribosomal RNA small subunit methyltransferase B [Veillonella
atypica KON]
gi|302513135|gb|EFL55174.1| ribosomal RNA small subunit methyltransferase B [Veillonella
atypica ACS-049-V-Sch6]
gi|429179646|gb|EKY20885.1| ribosomal RNA small subunit methyltransferase B [Veillonella
atypica KON]
Length = 452
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 132/275 (48%), Gaps = 33/275 (12%)
Query: 51 EDLMALYQTPDVPKPRYV-RVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPP-GCD 107
EDL A + +P+ R+NT+ +D+ + L +Q + V +D D++ +
Sbjct: 177 EDLCAWFN----EQPKLTARINTILIDIPQCLTMLNEQGWAVTQDSNYEDIIYINSHRGS 232
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
L + G + KAS +VA + P+PG ++LD C+APG K++++A LM G +++
Sbjct: 233 LEKSEAFIKGYITFMDKASMLVARLVNPQPGERILDCCAAPGGKSMYMATLMNNVGSLMS 292
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
C++++ ++ + GA+ + D L D S +L+D CSG G +
Sbjct: 293 CDIHEHKIELMNSNADRLGASIVHTKVQDATKL--PDSWNSYFDRVLVDAPCSGLGILQK 350
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENE 286
+LD S L++L + Q L R A++ ++YSTC+++ ENE
Sbjct: 351 KLDMRWRKQES----------ILSELPSLQLAILERAAMTVKEKGYLIYSTCTLNYKENE 400
Query: 287 DVIK---------SVLPIAMSFGFQ----LATPFP 308
+V++ S++P+A F + + T +P
Sbjct: 401 EVVEAFLQKHKEFSIIPVADDFPLKSNSGMITTYP 435
>gi|126465287|ref|YP_001040396.1| Fmu (Sun) domain-containing protein [Staphylothermus marinus F1]
gi|126014110|gb|ABN69488.1| Fmu (Sun) domain protein [Staphylothermus marinus F1]
Length = 449
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 122/242 (50%), Gaps = 17/242 (7%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQF-VVQKDDLVPDLLILPPGCDLHVHPLI 114
L++ D P VRVNTLK V+ + EL ++ V++ +VP +L P + L+
Sbjct: 175 LFKALDKQLPLSVRVNTLKTSVEEVLEELRREVKWVKRSSIVPTILKFPGPYNFDKSHLL 234
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
G + +Q +A+++ + L PKPG V+D +APG KT H+A LM +G I A +++++R
Sbjct: 235 RKGYIVIQEEAAAVASLILDPKPGMTVVDMAAAPGGKTQHMAELMNNEGVIYAFDIDEKR 294
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLL 233
+ R++D ++ +G N + D + D E+ +LLD CS GT + D
Sbjct: 295 IARMRDILRRTGVRNARIYRED--SRKAPDILGEEIADRVLLDAPCSSDGTIMKNPDLRW 352
Query: 234 PSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKS 291
E++++L Q + L PG +++Y TCS+ ENE +I+
Sbjct: 353 RLRE----------EKISELQKLQYEMLEAGWKLLKPG-GKLLYCTCSMLLEENEYIIEK 401
Query: 292 VL 293
L
Sbjct: 402 FL 403
>gi|365841978|ref|ZP_09383022.1| ribosomal RNA small subunit methyltransferase B [Flavonifractor
plautii ATCC 29863]
gi|364576620|gb|EHM53936.1| ribosomal RNA small subunit methyltransferase B [Flavonifractor
plautii ATCC 29863]
Length = 436
Score = 92.4 bits (228), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 133/275 (48%), Gaps = 20/275 (7%)
Query: 40 QLLVRNKVKSI--EDLMALYQTPDVPKPRYVRVNTLKMDVDS-AVLELGKQFVVQKDDLV 96
Q LV + V + E+ AL + P +VNTLK+ + A + + V+ +
Sbjct: 147 QWLVDSFVARLGREEAEALLAADNGEPPTCAQVNTLKISAEELAAMLTAEGVAVEPHPWL 206
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
PD L L L G ++Q A+ + A AP+PGW+VLDAC+APG K+ A
Sbjct: 207 PDCLFLNGTGSLEHLEAFQKGYFYIQDAAAHLAVLAAAPQPGWRVLDACAAPGGKSFAAA 266
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN-LDPKDPAYSEVRAILL 215
M+ +G + +C+++ ++R ++ + G ++++H + L+ + K + I+
Sbjct: 267 IAMENRGSVTSCDIHPHKLRLIEAGYQRLG---LDIIHANLLDGKERKAELLNSFDLIIA 323
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
D CSG G ++ D DP +E L ++ A + + GV ++Y
Sbjct: 324 DVPCSGLGIIRKKPDI--------RYKDPEPLENLPRVQAAILDNVADYVRPGGV--LLY 373
Query: 276 STCSIHQVENEDVIKSVLPIAMSF---GFQLATPF 307
+TC++ + ENE V+++ L F GFQ++ PF
Sbjct: 374 ATCTLLERENEGVVRAFLDKQRDFTLEGFQVSGPF 408
>gi|347523238|ref|YP_004780808.1| Fmu (Sun) domain containing protein [Pyrolobus fumarii 1A]
gi|343460120|gb|AEM38556.1| Fmu (Sun) domain protein [Pyrolobus fumarii 1A]
Length = 435
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/227 (31%), Positives = 112/227 (49%), Gaps = 23/227 (10%)
Query: 67 YVRVNTLKMDVDSAVLELGKQ--FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
++RVNTLK DVD LG++ FV + DL L ++ LH + G + Q K
Sbjct: 173 WIRVNTLKADVDEVAERLGEKGVFVRRDPDLPYMLRVVDYSEPLHHLEEMWKGEIVFQDK 232
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
AS++V AL P+PG ++D +APG K +AAL + ++V ++++ERV R+ +K+
Sbjct: 233 ASALVVEALDPQPGDYIVDFAAAPGIKATLVAALTDNQAEMVLLDVSRERVSRMMRVLKM 292
Query: 185 SGA----ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
G ++ V+ F K P ILLD CS SG + D + H
Sbjct: 293 YGVDLSKVHVAVVDSRFWWSPRKQP------KILLDAPCSSSGAVGK--DPAIKIHLESR 344
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENED 287
E +++ Q+ L +A++ ERVVY+ CSI E E+
Sbjct: 345 -------EWVDRFVPLQRDLLVNAVT--QGERVVYAVCSILPEEGEE 382
>gi|448491986|ref|ZP_21608654.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
californiensis DSM 19288]
gi|445692204|gb|ELZ44385.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
californiensis DSM 19288]
Length = 319
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/248 (32%), Positives = 114/248 (45%), Gaps = 17/248 (6%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD--DLVPDLLILPPGCD 107
++D+ A D P P VR N + + V E + V D D L LP G
Sbjct: 11 VDDVDAFRAACDRPLPSVVRTNGIAA-TPARVREAFDEGGVAYDPVDWHDGLFRLPEGNP 69
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
P V+G Q + S + ALAP+PG +V DAC+APG+KT +A M +G +VA
Sbjct: 70 GGNWPY-VHGWTHGQEEVSVLPTLALAPRPGERVWDACAAPGSKTTQIADAMDDEGTVVA 128
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+ N R+ L+ + G N V + D N K A+ E L+D CS GT +
Sbjct: 129 NDNNLGRLSALRHNAERLGITNAIVTNQDARNFSTKPLAFDEFDRALVDAPCSCEGTCRK 188
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVEN 285
D L D ++ ++ ++ QK L A+ + PG VVYSTC+ EN
Sbjct: 189 NPDVL----------DQWTLDHVHAVAGIQKGVLARAVQATRPG-GVVVYSTCTFAPEEN 237
Query: 286 EDVIKSVL 293
E V+ VL
Sbjct: 238 EAVLDHVL 245
>gi|389573303|ref|ZP_10163378.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus sp. M 2-6]
gi|388427000|gb|EIL84810.1| rRNA SAM-dependent methyltransferase RmsB [Bacillus sp. M 2-6]
Length = 442
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 78/242 (32%), Positives = 118/242 (48%), Gaps = 18/242 (7%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
VP + +RVN +K + + EL + + DL D L L G + P G V
Sbjct: 171 VPPKQTLRVNQMKKNRTALQQELMDAGIETELGDLSEDALKLMKGSIVST-PFFQEGFVT 229
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL P+PG VLDAC+APG K+ H+A M +GKIV+ +L++ +V+ +K
Sbjct: 230 IQDESSMLVARALDPQPGEMVLDACAAPGGKSTHIAERMNDEGKIVSLDLHEHKVKLIKQ 289
Query: 181 TIKLSGAANIEVLHGDFLNL-DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
K +IE D D D A + IL+D CSG G + D + + +S
Sbjct: 290 AAKRLNLTHIEAKALDARKASDHYDDASFD--RILIDAPCSGFGVIRRKPD-MKYTKSSE 346
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
+A +L+ Q+ L PG +VYSTC++ EN+ VI + L
Sbjct: 347 DSA---------RLATIQQSILHETAQLLKPG-GTLVYSTCTMDPTENQQVIHAFLQEHQ 396
Query: 298 SF 299
F
Sbjct: 397 DF 398
>gi|302874750|ref|YP_003843383.1| sun protein [Clostridium cellulovorans 743B]
gi|307690635|ref|ZP_07633081.1| sun protein [Clostridium cellulovorans 743B]
gi|302577607|gb|ADL51619.1| sun protein [Clostridium cellulovorans 743B]
Length = 443
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/251 (28%), Positives = 128/251 (50%), Gaps = 34/251 (13%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVH 111
L L + P + VRVN+LK D A EL + V++ + P+ + + G + +
Sbjct: 170 LKGLNERPSIT----VRVNSLKTTFDEAYEELEALGYSVEEGVIAPEAIRILKGKSIENN 225
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
PL + G + +Q +++ +VA+AL P + D CSAPG KT H+A L + K KI A ++
Sbjct: 226 PLFIKGSITVQDESAMIVASALEPSKDDVIFDMCSAPGGKTTHIAELSEDKSKIKAFDIF 285
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV------RAILLDPSCSGSGTA 225
+++ +++ IK G +IE + KD + +V +L+D CSG G
Sbjct: 286 DHKLKLIEENIKRLGITSIET--------EIKDASIHDVLLDDSADKVLIDVPCSGLGIM 337
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQ 282
++ P +T + +++ L K+ Q+ +R+A + GV +VYSTC+++
Sbjct: 338 RKK-----PEIK--YTKNEKDLKELVKI---QRDIMRNAAKYVRKGGV--LVYSTCTLNL 385
Query: 283 VENEDVIKSVL 293
EN++ I+ L
Sbjct: 386 EENQENIRWFL 396
>gi|410460745|ref|ZP_11314418.1| 16S rRNA methyltransferase B [Bacillus azotoformans LMG 9581]
gi|409926675|gb|EKN63831.1| 16S rRNA methyltransferase B [Bacillus azotoformans LMG 9581]
Length = 446
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 117/235 (49%), Gaps = 18/235 (7%)
Query: 69 RVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
RVN K V + L ++ VV +K +L D +++ G +L + G V +Q ++S
Sbjct: 182 RVNCNKAAVPEVLSLLEEENVVAEKGNLSIDAILISNG-NLATTKMFQEGYVTIQDESSM 240
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+VA AL P+ G KVLD+C+APG KT H+A L+ GK+++ +L+ +V+ +++ +K
Sbjct: 241 LVARALGPQKGDKVLDSCAAPGGKTTHIAELLGNDGKVISVDLHPHKVKLIEEQVKRLKL 300
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
N+E L D +L + E IL+D CSG G + D ++
Sbjct: 301 TNVETLVSDSRHLQEHFNS-EEFDRILVDAPCSGFGVIRRKPD----------IKYSKKL 349
Query: 248 ERLNKLSAFQKKALRHA---LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
+ + +L+A Q L L G +VYSTC+I Q EN V + L F
Sbjct: 350 DDIGQLAAIQLSILNSVAPLLKNGGT--LVYSTCTIDQEENAAVAERFLAENKEF 402
>gi|397906023|ref|ZP_10506850.1| Ribosomal RNA small subunit methyltransferase B [Caloramator
australicus RC3]
gi|397160937|emb|CCJ34185.1| Ribosomal RNA small subunit methyltransferase B [Caloramator
australicus RC3]
Length = 446
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 123/254 (48%), Gaps = 26/254 (10%)
Query: 52 DLM-ALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
DLM A Q P++ VRVNTLK ++ ++ + + KD + + LI+ +
Sbjct: 169 DLMDANNQAPELT----VRVNTLKSSKENLKAKIISRGIKVKDGQLKESLIIEEVGQIEK 224
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
++G ++Q ++S M + L PKPG KVLD C+APG K H+A LM+ G+I+A ++
Sbjct: 225 MQEFLDGLFYVQDQSSMMASIILNPKPGEKVLDMCAAPGGKATHMAELMENTGEIIAFDV 284
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR----AILLDPSCSGSGTAA 226
++ ++ + + K G I+ + D Y E ILLD CSG G
Sbjct: 285 HEHKIDLINENSKRLGIGIIKPMLKDATGF------YKEFENNFDKILLDAPCSGLGLIR 338
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVEN 285
++ P ++ + L+ Q L++A + + ++YSTC+I + EN
Sbjct: 339 KK-----PEIRWN-----VSLKNIKDLTKIQSILLKNASKYVKINGEILYSTCTITKDEN 388
Query: 286 EDVIKSVLPIAMSF 299
E +I+ L +F
Sbjct: 389 EQIIEKFLNENTNF 402
>gi|425440910|ref|ZP_18821202.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9717]
gi|389718555|emb|CCH97514.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9717]
Length = 450
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 146/306 (47%), Gaps = 41/306 (13%)
Query: 17 LWPVGDAEKFLMLHKGAIQLALAQL-LVRNKVKSIEDLMALY-QTPDVPKPRYVRVNTLK 74
L P A + +LH + L QL L R V E L + ++PD+ +R+N LK
Sbjct: 137 LLPENTASRLGILH--SFPDWLVQLWLDRFSVTETEQLCQWFNRSPDLD----IRINPLK 190
Query: 75 MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDL-----HVHPL--IVNGCVFLQGKASS 127
+++ EL + ++ + L LP C L ++ L G LQ ++
Sbjct: 191 TSLEALENEL------ESANITFNYLKLPLACRLTSGLGNIERLEGFRAGNYTLQDISAQ 244
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+V L P+PG ++DAC+APG KT H+A LM +G+I+AC+ R+R+L+ IK
Sbjct: 245 LVTYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLRQLEANIKRLDL 304
Query: 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEM 247
IE+ GD + + + +L+D CSG GT +R P T
Sbjct: 305 KAIEIHLGDSRD---RPQWHGIADRVLIDAPCSGLGTLHKR-----PDIRWRQTP----- 351
Query: 248 ERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304
E L L+ Q + L A ++ G+ +VY+TC++ +ENE VI+ L A +++A
Sbjct: 352 ENLPVLAKRQGELLASAATWVKPKGI--LVYATCTLDPLENERVIEQFL--AAHPDWKMA 407
Query: 305 TPFPNG 310
TP N
Sbjct: 408 TPDSNS 413
>gi|417910722|ref|ZP_12554438.1| putative ribosomal RNA small subunit methyltransferase B
[Staphylococcus epidermidis VCU105]
gi|341654910|gb|EGS78646.1| putative ribosomal RNA small subunit methyltransferase B
[Staphylococcus epidermidis VCU105]
Length = 301
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/302 (29%), Positives = 144/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 8 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVTTTVRANISRDSIDSIISKLEQEGYH 67
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 68 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 119
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K IK NI+ D +
Sbjct: 120 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNIKKLKLNNIKAFQHDATEV-- 177
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 178 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 224
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 225 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNPATGEQVKTLQ 280
Query: 320 AL 321
L
Sbjct: 281 IL 282
>gi|226949860|ref|YP_002804951.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum A2 str. Kyoto]
gi|226843504|gb|ACO86170.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum A2 str. Kyoto]
Length = 442
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/235 (28%), Positives = 122/235 (51%), Gaps = 28/235 (11%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVH 111
L L + P++ VRVN LK+D D A +LGK + +++ + P+ + + G ++ +
Sbjct: 170 LKGLNERPNIT----VRVNNLKIDYDEAFEKLGKYGYNIEEGYICPEAIQIIKGKNIEKN 225
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
PL + G + +Q +++ +VA ++ VLD CSAPG KT H++ +M K K+ A +++
Sbjct: 226 PLFIEGNITVQDESAMLVAPSMELDEESIVLDLCSAPGGKTTHISEIMNNKSKVYAYDVH 285
Query: 172 KERVRRLKDTIKLSGAANIEVLHGD--FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ ++ ++ K G NIE GD N K+ A+ +L+D CSG G ++
Sbjct: 286 QNKLSLIESNAKRLGIKNIETDVGDAAVFNKKLKEKAHR----VLMDVPCSGLGIIRKKP 341
Query: 230 DHLLPSHASGHTADPTEMER-LNKLSAFQKKALRHALSF---PGVERVVYSTCSI 280
+ T+ ER + + A Q+K + + S+ G+ ++YSTC++
Sbjct: 342 E-----------IKWTKNEREIKNIIAIQRKIMNNGASYLKEGGI--LLYSTCTL 383
>gi|156063948|ref|XP_001597896.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Sclerotinia sclerotiorum 1980
UF-70]
gi|154697426|gb|EDN97164.1| hypothetical protein SS1G_02092 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 713
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 88/260 (33%), Positives = 121/260 (46%), Gaps = 39/260 (15%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP-------DLL 100
++ A ++ + P+P +R NTL+ D+ A++ G VV L P L
Sbjct: 294 KEAFAFFEANETPRPVVIRTNTLRTHRRDLAQALINRG---VV----LEPVGKWSKVGLQ 346
Query: 101 ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK 160
I L P + G LQ +S + ALAP+ +VLD SAPG KT H+AALMK
Sbjct: 347 IFESAVPLGATPEYLAGHYILQAASSFLPVMALAPQENERVLDMASAPGGKTTHIAALMK 406
Query: 161 GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCS 220
G I A + NK R + L I GA N+ V + D PK +LLD CS
Sbjct: 407 NTGCIFANDSNKSRAKGLIGNIHRLGAKNVIVCNYDAREF-PK--VIGGFDRVLLDAPCS 463
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK-------ALRHALSFPGVERV 273
G+G A+ AS T + TE + L L QK+ ++ HA G +
Sbjct: 464 GTGVIAK--------DASVKT-NKTERDFL-MLPHLQKQLLLSAIDSVDHASKTGGY--I 511
Query: 274 VYSTCSIHQVENEDVIKSVL 293
VYSTCS+ ENE V++ VL
Sbjct: 512 VYSTCSVTVEENEQVVQYVL 531
>gi|18977038|ref|NP_578395.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus furiosus DSM
3638]
gi|397651170|ref|YP_006491751.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus furiosus
COM1]
gi|18892673|gb|AAL80790.1| putative nucleolar protein IV (nol1-nop2-sun family) [Pyrococcus
furiosus DSM 3638]
gi|393188761|gb|AFN03459.1| nol1-nop2-sun family nucleolar protein IV [Pyrococcus furiosus
COM1]
Length = 452
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/252 (28%), Positives = 121/252 (48%), Gaps = 16/252 (6%)
Query: 68 VRVNTLKMD-VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
+RVNTLK + + V + +P +L + D L G + +Q +AS
Sbjct: 190 IRVNTLKTTPEEVIKEFEEEGVEVVQSKRIPVVLKIKGPYDFDSSYLFRKGKIIVQEEAS 249
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
++ + L PKPG V+D +APG KT H+A LMK +GKI A +++K R++RLKD + G
Sbjct: 250 AVASVILDPKPGEVVVDLAAAPGGKTTHMAELMKNRGKIFAFDIDKARMKRLKDFVSRMG 309
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTE 246
++ + D P+ ++LD C+ SGT + +
Sbjct: 310 IKIVKPIVKD-ARKAPEILGEEVADRVMLDAPCTSSGTIGK----------NPELRWRLR 358
Query: 247 MERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-QL 303
+++ +++ Q++ L A L PG R++Y+TCSI E+ED + L F +L
Sbjct: 359 EQKIEEMAQLQRELLESAAKLVKPG-GRLLYTTCSIFIEEDEDNVSWFLETYKEFRLVKL 417
Query: 304 ATPFPNGTAEAS 315
+ P+ G E +
Sbjct: 418 SGPYDPGFLEGT 429
>gi|448470216|ref|ZP_21600413.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum kocurii JCM
14978]
gi|445808294|gb|EMA58366.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum kocurii JCM
14978]
Length = 316
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 112/249 (44%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGC 106
++D A D P P VRVN L V A E G + + D L LP G
Sbjct: 11 VDDAAAFRAACDRPLPSVVRVNELAASPGRVREAFAEEGVAY--EAVDWHDGLFRLPDGN 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
P V+G Q + S + AL P+PG +V DAC+APG+KT +A M +G +V
Sbjct: 69 PGGNWPY-VHGWTHGQEEVSVLPGLALDPQPGERVWDACAAPGSKTTQIADAMGDEGTVV 127
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + N R+ L+ + G N V + D N K A+ E L+D CS GT
Sbjct: 128 ANDNNLGRLSALRHNAERLGITNAIVTNQDARNFSMKPLAFDEFDRALVDAPCSCEGTCR 187
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVE 284
+ D D ++ ++ ++ QK L A+ + PG VVYSTC+ E
Sbjct: 188 KNPD----------VVDQWTLDHVHAVAGIQKGILARAVQATRPG-GTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V+ VL
Sbjct: 237 NEAVLDHVL 245
>gi|427418132|ref|ZP_18908315.1| ribosomal RNA small subunit methyltransferase RsmB [Leptolyngbya
sp. PCC 7375]
gi|425760845|gb|EKV01698.1| ribosomal RNA small subunit methyltransferase RsmB [Leptolyngbya
sp. PCC 7375]
Length = 446
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 113/233 (48%), Gaps = 24/233 (10%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQGKA 125
+RVN L+ V+ L V +PD + I+ P ++ P G +Q +
Sbjct: 183 LRVNRLRTTVEQVTTALTDHGLTVAPHAGIPDAIRIVGPMGNVRQLPGYEAGWWMVQDSS 242
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ +V+ + P+PG V+DAC APG KT HLA +M +G+++ C+ R+ +++ K
Sbjct: 243 AQLVSYLVNPQPGETVIDACGAPGGKTTHLAEMMGDQGRVLGCDRTSSRLNKIRQNAKRL 302
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLD---HLLPSHASGHT 241
+IE + GD + P + + +LLD CSG GT D P+ +G
Sbjct: 303 QLNSIETVMGD----SREHPEFKGIADRVLLDVPCSGLGTLHRHADARWRQTPNSIAG-- 356
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVIKSVL 293
L+ Q++ L A+ + + V VYSTC++H EN+++I++ L
Sbjct: 357 -----------LTILQRELLESAVDWVKPDGVLVYSTCTLHPDENQNLIQTFL 398
>gi|418576403|ref|ZP_13140549.1| putative tRNA and rRNA cytosine-C5-methylase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
gi|379325465|gb|EHY92597.1| putative tRNA and rRNA cytosine-C5-methylase [Staphylococcus
saprophyticus subsp. saprophyticus KACC 16562]
Length = 437
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 121/256 (47%), Gaps = 23/256 (8%)
Query: 68 VRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKAS 126
VRVN ++ VD A+ L ++V++D + L + G + + +G + +Q K+S
Sbjct: 181 VRVNLTRISVDDAIRRLTDDDYIVEQDREIETCLHIS-GKPIIESRMFKDGLISIQDKSS 239
Query: 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186
+ +A K G +VLDACSAPG K H+A ++ G G + A ++++ ++ + I+
Sbjct: 240 MFIGELMALKEGDQVLDACSAPGGKACHIAEILNGTGHVDATDIHEHKIDLIDFNIRKLR 299
Query: 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADP-- 244
+NI D + D Y + IL+D CSG G + + + S H +
Sbjct: 300 LSNISAFEHD--ATEKYDKVYDK---ILVDAPCSGLGVLRHKPE--IKYEQSQHAIESLV 352
Query: 245 -TEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-Q 302
++E LN + K PG ++YSTC+I Q+ENE+V+ + L F F Q
Sbjct: 353 EIQLEILNNVKYNVK---------PG-GTMIYSTCTIEQMENENVVYTFLKENKDFEFDQ 402
Query: 303 LATPFPNGTAEASQFL 318
P + Q L
Sbjct: 403 FEHPITGEKVKTMQIL 418
>gi|386319520|ref|YP_006015683.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
pseudintermedius ED99]
gi|323464691|gb|ADX76844.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
pseudintermedius ED99]
Length = 433
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 116/241 (48%), Gaps = 16/241 (6%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
+P + VRVN ++ VD A+ +L + F VQ D + D+ + G + L G +
Sbjct: 172 LPGTQTVRVNRTQITVDEAIEQLRAEGFDVQSDTHI-DVCLHVSGHGVMTSELFQKGLIS 230
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q K+S VA + +PG VLD+CSAPG K H+A ++ +G ++A +++ +++ +
Sbjct: 231 IQDKSSMFVAEYMELQPGDAVLDSCSAPGGKACHMAEILNDQGTVLATDVHAHKIQLIDH 290
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
I+ I + D P D + +V LLD CSG G + + +
Sbjct: 291 NIRKLHLTGIRAMQHDATQ--PYDQQFDKV---LLDAPCSGLGVLRHKPE-------IKY 338
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
P +++ L L + L G +VYSTC+I Q+EN++VI + L F
Sbjct: 339 VITPQDVKGLVDLQLRIIDNVSKHLKAGGT--MVYSTCTIEQLENDNVIYTFLKSHPDFE 396
Query: 301 F 301
F
Sbjct: 397 F 397
>gi|168019738|ref|XP_001762401.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162686479|gb|EDQ72868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 465
Score = 92.0 bits (227), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 109/214 (50%), Gaps = 13/214 (6%)
Query: 96 VPDLLILPPGC-DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVH 154
+PD + L G D+ L+ NGC+ +Q +++ +V + + PG ++D C+APG K ++
Sbjct: 224 LPDFVRLSAGMQDVLRSGLLQNGCIAVQDESAGLVVSVIDAHPGDTIIDCCAAPGGKALN 283
Query: 155 LAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAI 213
LA+ + G+GK+VA ++N+ R+R L + + G + + H D + K A +
Sbjct: 284 LASRLNGQGKVVAVDVNEGRLRILSEAAEQQGVGDVVSPCHYDLRDYAAK--AAGTADRV 341
Query: 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERV 273
LLD CSG G ++R D L S P ++++L +L A + GV +
Sbjct: 342 LLDAPCSGLGVLSKRAD--LRWRRS-----PEDVKQLTELQDSLLDAAALLVKPGGV--L 392
Query: 274 VYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF 307
VYSTCSI EN + I + L F + PF
Sbjct: 393 VYSTCSIETSENSERIAAFLSRNRDFVSENVEPF 426
>gi|448353013|ref|ZP_21541791.1| RNA methylase [Natrialba hulunbeirensis JCM 10989]
gi|445641080|gb|ELY94163.1| RNA methylase [Natrialba hulunbeirensis JCM 10989]
Length = 302
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
I+D A + P VRVNT+K + A L + V ++ + P +L L PG
Sbjct: 11 IDDFEAFLAACERPLGNAVRVNTIKASAERATAALEEDDVAYEQAEWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K LAALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPVVLDPQPGERVWDCCAAPGGKATQLAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N K + E L+D CS GT
Sbjct: 127 VANDNNLGRISALRFNAERLGATSLAVTNDDARNYSMKRFPFDEFDRALVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVE 284
+ D L + + GH ++ ++ QK LR A+ + VVYSTC+ E
Sbjct: 187 RKNPD-ALDNWSEGH---------IDTIAGIQKGILRRAIQTTREGGTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V++ +
Sbjct: 237 NEAVVQHAI 245
>gi|224541737|ref|ZP_03682276.1| hypothetical protein CATMIT_00909 [Catenibacterium mitsuokai DSM
15897]
gi|224525341|gb|EEF94446.1| ribosomal RNA small subunit methyltransferase B [Catenibacterium
mitsuokai DSM 15897]
Length = 439
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/226 (33%), Positives = 106/226 (46%), Gaps = 19/226 (8%)
Query: 69 RVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSM 128
R+NT KM + L K L PD ++L G H G V +Q ++S M
Sbjct: 199 RMNTYKMSREEF---LKKYPEFTPGYLSPDSVLLKEGNIAHTEAF-KEGLVTIQDESSQM 254
Query: 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188
VA L P VLD C APG+KT HL LM KG I +L + + ++D K G +
Sbjct: 255 VARLLNPGEEDVVLDMCGAPGSKTTHLGILMNNKGLIDVYDLYPHKAKLIEDNAKRLGLS 314
Query: 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
NI V GD +L D Y++ ILLD CSG G + + H +D
Sbjct: 315 NIHVHTGDSTDLSLFDKQYTK---ILLDGPCSGLGVLSRK------PEIKYHDSDA---- 361
Query: 249 RLNKLSAFQKKALRHALSF-PGVERVVYSTCSIHQVENEDVIKSVL 293
++++ Q K L +A S +VYSTC+I++ ENE I+ +
Sbjct: 362 -MDEIILIQAKLLENAYSLCIKGGNIVYSTCTINKKENEKQIEKFI 406
>gi|392548176|ref|ZP_10295313.1| rRNA (cytosine-C(5)-)-methyltransferase RsmF [Pseudoalteromonas
rubra ATCC 29570]
Length = 485
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/248 (34%), Positives = 123/248 (49%), Gaps = 42/248 (16%)
Query: 66 RYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILP-PGCD----------------L 108
R VRVNTLKM + ++F Q L + I P P C+ +
Sbjct: 44 RAVRVNTLKMSL--------QEFEHQAAQL--NWHIEPIPWCEQGYWLTRPAEEEANLPI 93
Query: 109 HVHPLIVNGCVFLQGKASSM---VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
L ++GC+++Q +ASSM +A A + PG VLD +APG+KT LAALM+ +G +
Sbjct: 94 GNTALHLSGCIYVQ-EASSMLPPMALATSLTPGEHVLDMAAAPGSKTSQLAALMENQGIL 152
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+A EL+ R++ L T+K G AN + H D D Y ILLD CSG GT
Sbjct: 153 IANELSSSRLKTLAATLKRMGVANCALSHFDGQVFG--DYMYESFDHILLDAPCSGEGTV 210
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285
+ D L + + D E+++ SAF AL+ PG +VYSTC++ VEN
Sbjct: 211 RKDPD-ALKNWSLASNQDIAEVQKTLIHSAFM--ALK-----PG-GTLVYSTCTLTPVEN 261
Query: 286 EDVIKSVL 293
+ + +L
Sbjct: 262 QQICDHLL 269
>gi|114332240|ref|YP_748462.1| Fmu (Sun) domain-containing protein [Nitrosomonas eutropha C91]
gi|114309254|gb|ABI60497.1| Fmu (Sun) domain protein [Nitrosomonas eutropha C91]
Length = 424
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 123/246 (50%), Gaps = 10/246 (4%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCD 107
S ED++ L Q P P +RVN+L + + L ++ + Q P + L
Sbjct: 133 SDEDILRLGQVLQQPAPLDIRVNSLLAKREEVIAVLKQEGIEAQSTPFSPVGIRLTGNPA 192
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
++ + L ++G + +Q + S ++ LAPK G V+D C+ G KT+ L ALM +G++ A
Sbjct: 193 INRNALFLSGKIEVQDEGSQILGFLLAPKRGEMVVDFCAGAGGKTLLLGALMHSRGRLYA 252
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+++++R+ LK +K SG +N+ H D ++ +L+D CSG GT
Sbjct: 253 FDISEKRLNNLKPRLKRSGLSNVHPQHIDSEKDIKLKRLAGKIDRVLVDAPCSGLGTLRR 312
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENED 287
D L S + + + +++ L+A K L PG R+VY+TCS+ EN+
Sbjct: 313 NPD--LKWRQSPESINELQKKQIAILTAAAK------LLKPG-GRLVYATCSLLPEENQQ 363
Query: 288 VIKSVL 293
VI+ L
Sbjct: 364 VIERFL 369
>gi|347522574|ref|YP_004780144.1| NOL1/NOP2/sun family RNA methylase [Pyrolobus fumarii 1A]
gi|343459456|gb|AEM37892.1| RNA methylase, NOL1/NOP2/sun family [Pyrolobus fumarii 1A]
Length = 460
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/258 (29%), Positives = 124/258 (48%), Gaps = 25/258 (9%)
Query: 47 VKSIEDLMA------LYQTPDVPKPRYVRVNTLKMDVDSAVLEL---GKQFVVQKDDLVP 97
+K + DL+ L++ + P VRVNTLK V+ V L GK +V + VP
Sbjct: 169 IKRMRDLLGPDEAERLFKALNTRLPLSVRVNTLKATVEEVVEHLRREGKNPIVS--ERVP 226
Query: 98 DLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAA 157
++ + L G + +Q +A++ + L PKPG V+D C+APG KT HLA
Sbjct: 227 VVVKFEGPYNFDRSRLYREGKIIIQEEAAAAASIMLDPKPGETVVDMCAAPGGKTTHLAE 286
Query: 158 LMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217
LMK +G+I A +++ R++R+K +K G + + D P +LLD
Sbjct: 287 LMKNQGRIYAFDIDDARIKRMKMLLKRMGIKIVTIYKED-AGKAPDILGEEVADKVLLDA 345
Query: 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVY 275
C+ +GT + + G L ++ Q++ L A+ PG R++Y
Sbjct: 346 PCTSTGTIMKNPELRWRVREDG----------LEEIVREQRRLLEAAVRLLKPG-GRLLY 394
Query: 276 STCSIHQVENEDVIKSVL 293
+TCS+ ENE+ ++ +L
Sbjct: 395 TTCSLLPEENEENVRWLL 412
>gi|330835316|ref|YP_004410044.1| Fmu (Sun) domain-containing protein [Metallosphaera cuprina Ar-4]
gi|329567455|gb|AEB95560.1| Fmu (Sun) domain-containing protein [Metallosphaera cuprina Ar-4]
Length = 311
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 71/224 (31%), Positives = 113/224 (50%), Gaps = 25/224 (11%)
Query: 67 YVRVNTLKMDVDSAVLEL---GKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
+VRVNTLK D D + L G F + +D D + + + P G + Q
Sbjct: 58 WVRVNTLKGDRDEIIESLRVKGYSFSLDEDFDFLLNWISPKPSSTDEFR----EGLIIPQ 113
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
K+S++V + L PKPG +L+ +PG KT + + +V+ +++++RV + +
Sbjct: 114 DKSSAIVVSVLNPKPGENILEIGGSPGGKTSLIQQITNNSSYVVSLDISEKRVNLQRRLL 173
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
+L G N++V+ D N + +V IL+D CS SGT +D +P
Sbjct: 174 RLWGVENVDVILADGSNFKVR-----KVDKILIDAPCSNSGTI--NVDPSIPFRL----- 221
Query: 243 DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
T+ E LNKL Q++ L++A S GVE +VYSTCS+ E E
Sbjct: 222 --TKTE-LNKLVRIQREILKNAFS-SGVE-IVYSTCSLFPEEGE 260
>gi|425468533|ref|ZP_18847544.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9701]
gi|389884794|emb|CCI34927.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9701]
Length = 450
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 93/306 (30%), Positives = 147/306 (48%), Gaps = 43/306 (14%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQL-LVRNKVKSIEDLMALY-QTPDVPKPRYVRVNTLKMD 76
P A + +LH + L QL L R V E L + ++PD+ +R+N LK
Sbjct: 139 PENTASRLGILH--SFPDWLVQLWLDRFSVTETEQLCQWFNRSPDLD----IRINPLKTS 192
Query: 77 VDSAVLELGKQFVVQKDDLVPDLLILPPGCDL-----HVHPL--IVNGCVFLQGKASSMV 129
++ EL + ++ + L LP C L ++ L G LQ ++ +V
Sbjct: 193 REALENEL------ESANITFNHLKLPLACRLTSGLGNIERLEGFRAGNYTLQDISAQLV 246
Query: 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189
L P+PG ++DAC+APG KT H+A LM +GKI+AC+ R+R+L+ IK
Sbjct: 247 TYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGKILACDQTASRLRQLEANIKRLDLKA 306
Query: 190 IEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
IE+ GD + P + + +L+D CSG GT +R P T E
Sbjct: 307 IEIHLGDSRD----RPQWCGIADRVLIDAPCSGLGTLHKR-----PDIRWRQTP-----E 352
Query: 249 RLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
L L+ Q + L A ++ G+ +VY+TC+++ +ENE VI+ L A +++AT
Sbjct: 353 NLPVLAKRQGELLASAATWVKPKGI--LVYATCTLNPLENERVIEQFL--AAHPDWKMAT 408
Query: 306 PFPNGT 311
P N +
Sbjct: 409 PDSNSS 414
>gi|448385826|ref|ZP_21564120.1| RNA methylase, NOL1/NOP2/sun family protein [Haloterrigena
thermotolerans DSM 11522]
gi|445656236|gb|ELZ09075.1| RNA methylase, NOL1/NOP2/sun family protein [Haloterrigena
thermotolerans DSM 11522]
Length = 302
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 117/252 (46%), Gaps = 22/252 (8%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLIL--- 102
+ ED +A + P VRVNT+K VD A+ L + ++ D P +L L
Sbjct: 11 IDDFEDFLAACRRP---LGNAVRVNTIKASVDRALATLEAEGLAYEQADWNPRVLDLETD 67
Query: 103 PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK 162
PG +G Q + S++ L P+PG +V D C+APG K +AALM +
Sbjct: 68 SPGSTWASFHGFTHG----QEEVSAVPPVVLDPEPGERVWDCCAAPGGKATQIAALMDDR 123
Query: 163 GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222
G +VA + N R+ L+ + GA ++ V + D N + + E L+D CS
Sbjct: 124 GTVVANDNNLGRISALRFNAERLGATSLAVTNADARNYSLQRFDFDEFDRTLVDAPCSCE 183
Query: 223 GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIH 281
GT + D L + + GH ++ ++ QK +R A+ + VVYSTC+
Sbjct: 184 GTIRKNPD-ALDNWSEGH---------ISSVAGIQKGIIRRAIQATREGGTVVYSTCTFA 233
Query: 282 QVENEDVIKSVL 293
ENE V++ L
Sbjct: 234 PEENEAVVQHAL 245
>gi|297617049|ref|YP_003702208.1| sun protein [Syntrophothermus lipocalidus DSM 12680]
gi|297144886|gb|ADI01643.1| sun protein [Syntrophothermus lipocalidus DSM 12680]
Length = 460
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 105/227 (46%), Gaps = 20/227 (8%)
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G ++Q AS +V+AA AP+ G V D + G KT HLA LM +G I A E+ ++V
Sbjct: 241 GWFYVQDDASMLVSAACAPEAGQVVYDLAAGVGGKTSHLAELMGNQGIIRAVEILPKKVE 300
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
LK+ I+ G +++ GD L P P + E +LLD CSG G R D
Sbjct: 301 ILKENIRRLGITIVDIWTGDALG--PLAPGWGEGDVVLLDAPCSGLGVLRRRSDARWRKS 358
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIHQVENEDVIKSVLP 294
T LS QK+ L+ L PG +VYSTC++ ENE+VI L
Sbjct: 359 EKDITV----------LSELQKRLLKRGAQLVRPG-GVLVYSTCTLEPEENEEVIDWFLG 407
Query: 295 IAMSFGF-QLATP---FPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337
F L+ P FP +A + + + F P ++ T F+
Sbjct: 408 EETGFVLDDLSQPLRFFPFSPEDAKAASRGMLVLFPP-RYGTDGMFI 453
>gi|315924509|ref|ZP_07920730.1| RNA methyltransferase Sun [Pseudoramibacter alactolyticus ATCC
23263]
gi|315622213|gb|EFV02173.1| RNA methyltransferase Sun [Pseudoramibacter alactolyticus ATCC
23263]
Length = 440
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 123/259 (47%), Gaps = 22/259 (8%)
Query: 61 DVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP--PGCDLHVHPLIVNG 117
+VP P VRVNTLK+ + +L + V+ L D L L +L +G
Sbjct: 183 NVPAPLSVRVNTLKLSREDLAAKLQAEGLAVEVGQLSSDCLYLKGISASELVQSCWFKDG 242
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
+ +Q + + ++A L P+PG ++LD C+APG KT HLA LM G+I+A ++ R++
Sbjct: 243 WLTIQDQGAMLIAELLDPRPGERILDMCAAPGGKTTHLAQLMSDAGEIIARDIYPSRLQL 302
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
++D K G +NI+ D + ++ A+ + ILLD CSG G + P
Sbjct: 303 IEDAAKRLGISNIKTELWDGIQPPKEEAAFDK---ILLDAPCSGYGVIRRK-----PEIR 354
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVLP-- 294
T E + Q+ L + L + ++VY+TC+I EN I V+
Sbjct: 355 YRGTK-----EDRRAIRQTQRTLLNNGLDLLRSDGKLVYATCTIDPEENNRQIARVVRER 409
Query: 295 ---IAMSFGFQLATPFPNG 310
IA + ++ +P +G
Sbjct: 410 SDVIAEAETERMTSPLTDG 428
>gi|196230011|ref|ZP_03128874.1| sun protein [Chthoniobacter flavus Ellin428]
gi|196225608|gb|EDY20115.1| sun protein [Chthoniobacter flavus Ellin428]
Length = 410
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 109/220 (49%), Gaps = 22/220 (10%)
Query: 109 HVHP-LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
H+ P I G ++Q ++ + LAP+PG VLDAC+APG KT +LA LM +G+I+A
Sbjct: 202 HIPPSWIAMGLCYVQDPSTLLSCDLLAPQPGETVLDACAAPGGKTTYLAQLMHDQGRIIA 261
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAILLDPSCSGSGTAA 226
C+L RV RL++ +K G + D + P DP IL+D CS +G
Sbjct: 262 CDLYDSRVARLRENLKRLGVTIARAIRHDCMQAGPPLDP--DSFDRILVDAPCSNTGVIR 319
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVE 284
R+D TE E ++ A Q LR + PG +VYSTCS+ E
Sbjct: 320 RRVD---------VRWRLTE-EDFIRMPAQQLALLRRTATLLKPG-GTLVYSTCSLEPEE 368
Query: 285 NEDVIKSVLPIAMSFGF---QLATPFPN--GTAEASQFLK 319
N+ +++ V S F + A PF + A A++F++
Sbjct: 369 NDLLVEKVCAAIPSLRFVESRRALPFVDRIDGAFAAKFVR 408
>gi|83591583|ref|YP_425335.1| tRNA/rRNA cytosine-C5-methylase [Rhodospirillum rubrum ATCC 11170]
gi|386348265|ref|YP_006046513.1| tRNA/rRNA cytosine-C5-methylase [Rhodospirillum rubrum F11]
gi|83574497|gb|ABC21048.1| tRNA/rRNA cytosine-C5-methylase [Rhodospirillum rubrum ATCC 11170]
gi|346716701|gb|AEO46716.1| tRNA/rRNA cytosine-C5-methylase [Rhodospirillum rubrum F11]
Length = 454
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 85/278 (30%), Positives = 130/278 (46%), Gaps = 54/278 (19%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQKDDLV----------PDLLILPPGCDLHVHPLI 114
P +RVN LK D +SA L L ++ V + + P++ I P CD
Sbjct: 164 PLDLRVNALKSDRESARLALAREQVDTRPGALSPCALRAEGRPNVAITAPFCD------- 216
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
G V +Q + S MVA A PG VLD C+ G KT+ LAA M+ KG +VA ++++ R
Sbjct: 217 --GLVEVQDEGSQMVALLCAVAPGMSVLDLCAGAGGKTLALAAGMENKGTLVATDISEGR 274
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR-----AILLDPSCSGSGTAAERL 229
+ R + ++ +G N+ LDP+ + + R +L+D CSG+GT
Sbjct: 275 LARAQTRLQRAGVHNVT-----RKVLDPETRKWLKRRKASFDVVLVDAPCSGTGTWRRNP 329
Query: 230 D---HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
D L P S A+ + + L++ +A K PG R+VY+TCS+ ENE
Sbjct: 330 DARWKLTPDTISALNAEQSAL--LDRAAALVK---------PG-GRLVYATCSLLPAENE 377
Query: 287 DVIKS---------VLPIAMSFGFQLATPFPNGTAEAS 315
I + LP+A ++ P+P G A+ S
Sbjct: 378 AQIAAFLERRDDYRALPVAETWAKVSPAPYP-GAADVS 414
>gi|345304018|ref|YP_004825920.1| RNA methylase, NOL1/NOP2/sun family [Rhodothermus marinus
SG0.5JP17-172]
gi|345113251|gb|AEN74083.1| RNA methylase, NOL1/NOP2/sun family [Rhodothermus marinus
SG0.5JP17-172]
Length = 321
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 43/249 (17%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPPGCD---LHVHP 112
P+ RVNTLK+D D+ Q ++ + L P D +PP L P
Sbjct: 32 PRAMAFRVNTLKVDRDTV------QAALEAEGLHPRPVAWYADAFQVPPEARAALLESRP 85
Query: 113 LIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK 172
+++Q AS + LAP+P +VLD C+APG+KT+ LA LM+G+G+I A E+ +
Sbjct: 86 -YRERWIYVQDLASMLPPLVLAPEPDARVLDLCAAPGSKTLQLACLMQGRGEIAAVEVVR 144
Query: 173 ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHL 232
R RLK ++ GA N+ + D + P + + +L+D CS G
Sbjct: 145 PRFYRLKANVQAYGAPNVRLYLQDGTRVGRYRPEFFDY--VLVDAPCSSEG--------- 193
Query: 233 LPSHASGHTADPTEME--RLNKLSAFQKKALR------HALSFPGVERVVYSTCSIHQVE 284
H +DP L K+ +K R +L GV +VY+TC++ E
Sbjct: 194 -----RFHLSDPDTFAYWSLRKIREMARKQYRLLVSAVQSLRPGGV--LVYATCTMAPEE 246
Query: 285 NEDVIKSVL 293
NE V+ +L
Sbjct: 247 NEAVLDRLL 255
>gi|224061242|ref|XP_002300386.1| predicted protein [Populus trichocarpa]
gi|222847644|gb|EEE85191.1| predicted protein [Populus trichocarpa]
Length = 476
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/271 (29%), Positives = 122/271 (45%), Gaps = 35/271 (12%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP----DLLIL 102
+ +LM L + + P+P +R NTLK D+ + +L G V D L L++
Sbjct: 87 VNELMELIEAFEKPRPTCLRTNTLKTRRRDLANVLLNRG----VNLDPLSKWSKVGLVVY 142
Query: 103 PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK 162
+ P + G LQ +S M ALAP+ +++D +APG KT ++AALMK
Sbjct: 143 DSQVPIGATPEYMAGHYMLQSASSFMPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNS 202
Query: 163 GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222
G I A E+ +R+R L + G N V + D L PK + V +LLD CSG+
Sbjct: 203 GIIYANEIKAQRLRSLTANLHRMGVTNTIVCNYDGREL-PKTLGLNTVDRVLLDAPCSGT 261
Query: 223 GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYST 277
G ++ + + S S E + + + QK+ L A+ +VYST
Sbjct: 262 GVISKD-ESVKISKTS---------EDIEQCAHLQKQLLLAAIDMVDANSKSGGYIVYST 311
Query: 278 CSIHQVENEDVIKSVL--------PIAMSFG 300
CSI ENE + L P + FG
Sbjct: 312 CSIMVAENEAAVDYALKKRNVKLVPCGLDFG 342
>gi|17536757|ref|NP_493742.1| Protein NOL-1 [Caenorhabditis elegans]
gi|351050956|emb|CCD73642.1| Protein NOL-1 [Caenorhabditis elegans]
Length = 664
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/277 (29%), Positives = 127/277 (45%), Gaps = 38/277 (13%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDL 108
+L+ + D P+P +R N+LK+ D+ ++ G D L++ +
Sbjct: 217 ELLEFLEANDNPRPVTIRANSLKVKRRDLAKNLINRGMNVDPAADWTKVGLVVYDSQVPV 276
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P + G +QG S + ALAP+PG +VLD CSAPG KT H+AALMK G + A
Sbjct: 277 GATPEYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNSGVLFAN 336
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR-----AILLDPSCSGSG 223
+ N R R + + G N V NL ++ +S++R ILLD CSG+G
Sbjct: 337 DANFTRCRAIIGNLHRLGVNNTVV-----CNLGGEE--FSKIRPNGFDRILLDAPCSGTG 389
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-----SFPGVERVVYSTC 278
+ + + D +++R + + Q++ + AL + P +VYSTC
Sbjct: 390 V-------IWKDQSVKTSKDSQDVQRRHTM---QRQLILSALDSLDANSPNGGYLVYSTC 439
Query: 279 SIHQVENEDVIKSVL--------PIAMSFGFQLATPF 307
S+ ENE V+ +L P +S G T F
Sbjct: 440 SVLVEENEAVVNFLLERRHCELVPTGLSIGVDGYTRF 476
>gi|310828894|ref|YP_003961251.1| hypothetical protein [Eubacterium limosum KIST612]
gi|308740628|gb|ADO38288.1| hypothetical protein ELI_3326 [Eubacterium limosum KIST612]
Length = 441
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/237 (30%), Positives = 114/237 (48%), Gaps = 24/237 (10%)
Query: 65 PRYVRVNTLKMDVDSAVLELG-KQFVVQKDDLVPDLLILP--PGCDLHVH--PLIVNGCV 119
P +R NTLK+D ++ +L K +K L D L L G + V PL GC
Sbjct: 180 PFTIRANTLKVDRNTLEEKLSDKGIYCEKGALDCDALHLSHLGGFENQVQCDPLFTAGCF 239
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
+Q + + A L P+ +VLD C+APG KT HL+ +M+ +G I+A ++ R++ ++
Sbjct: 240 MIQDQGAMKAARLLGPEKTDRVLDMCAAPGGKTTHLSQIMENEGTIIARDIFDSRLKLIE 299
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER--LDHLLPSHA 237
+T G NIE D P+D + ILLD CSG G + + + + A
Sbjct: 300 ETAARLGICNIETEKTDGCIFRPEDREAFD--RILLDAPCSGLGIIRRKPEIRYTITKKA 357
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSV 292
+L Q++ L HA+ + PG +VY TC+++ ENE I+ V
Sbjct: 358 R------------KELVRIQRQLLDHAVQYLKPG-GTLVYCTCTVNSDENERQIERV 401
>gi|86609413|ref|YP_478175.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86557955|gb|ABD02912.1| ribosomal RNA small subunit methyltransferase B [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 457
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 115/244 (47%), Gaps = 29/244 (11%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPP-GCDLHVHPLIVNGCVFLQGKA 125
+RVN L+ DV+ + L + VP L L D+ P G +Q +
Sbjct: 190 LRVNPLRADVNKVIQALAAAGIPALPISEVPGALRLQDHAGDITALPGFAQGWWSVQDAS 249
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ V L P+PG +V+D C+APG KT +A M+ +G+I A + + R+RRL++ +
Sbjct: 250 AQQVVHWLDPQPGERVIDCCAAPGGKTTQIAQHMQDRGEIWALDRHPHRLRRLEENRQRL 309
Query: 186 GAANIEVLHGDFLNLDPKD--------------PAYSEVRAILLDPSCSGSGTAAERLDH 231
G ++I L D L+L P + +LLD CSG GT
Sbjct: 310 GLSSIRPLAIDLLSLSAAADRVSGTESLPPAPLPPWQSADRVLLDAPCSGLGT------- 362
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
L HA ER+ +L+ Q + L+ A + PG +VY+TC++H ENE++I
Sbjct: 363 -LHRHADARWRQTP--ERIPELAHLQAQLLQVAARWLKPG-GVLVYATCTLHPAENEEII 418
Query: 290 KSVL 293
++ L
Sbjct: 419 QAFL 422
>gi|294791792|ref|ZP_06756940.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
6_1_27]
gi|294457022|gb|EFG25384.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
6_1_27]
Length = 451
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 124/243 (51%), Gaps = 22/243 (9%)
Query: 64 KPRYV-RVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPL--IVNGCV 119
+PR R+NT+K+ ++ + EL ++V++D +P+++ + G H+ ++ G +
Sbjct: 185 QPRLTARINTVKVSIEDCLKELEDLDWIVEQDTYIPEVVYID-GHQGHLEKAKPVLEGHI 243
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
KAS +VA + P+PG ++LD C+APG K++H+A+LM G I++C++ ++ +
Sbjct: 244 TFMDKASMLVAHVVDPQPGERILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLELIN 303
Query: 180 DTIKLSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLD-HLLPSH 236
+ G + I ++ G +L D + +L+D CSG G ++LD +
Sbjct: 304 QNAERLGVSIISTKLQDGRYL----PDNWKEQFDRVLVDAPCSGLGILQKKLDMRWRKTE 359
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
+ ++E L K S K G +VYSTC+++ ENE V+ L I
Sbjct: 360 SLLIKLPLLQLEILEKASEMVK--------VNGY--LVYSTCTMNSGENEAVLNKFLAIH 409
Query: 297 MSF 299
+F
Sbjct: 410 KNF 412
>gi|420221991|ref|ZP_14726916.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH08001]
gi|420224854|ref|ZP_14729692.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH06004]
gi|394290022|gb|EJE33892.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH08001]
gi|394294257|gb|EJE37943.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIH06004]
Length = 435
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/265 (30%), Positives = 128/265 (48%), Gaps = 38/265 (14%)
Query: 68 VRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPL-IVN------GCV 119
VR N + +DS + +L ++ + V+KDD++P C LH+ + +VN G +
Sbjct: 179 VRANISRDSIDSIISKLEQEGYHVKKDDMLP-------FC-LHISGMPVVNSNAFKEGYI 230
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
+Q K+S MVA + KVLDACSAPG K H+A ++ +G + A ++++ ++ +K
Sbjct: 231 SIQDKSSMMVAYVMNLGRDDKVLDACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIK 290
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASG 239
IK NI+ D + D Y + IL+D CSG G + P
Sbjct: 291 QNIKKLKLNNIKAFQHDATEV--YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYS 340
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
+ + + L Q + L + PG +VYSTC+I Q+ENE+VI + L
Sbjct: 341 QSQNS-----IKSLVELQLQILENVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHK 394
Query: 298 SFGFQLATPFPN-GTAEASQFLKAL 321
F F+ PF N T E + L+ L
Sbjct: 395 DFEFE---PFQNPATGEQVKTLQIL 416
>gi|409045898|gb|EKM55378.1| hypothetical protein PHACADRAFT_255965 [Phanerochaete carnosa
HHB-10118-sp]
Length = 704
Score = 91.7 bits (226), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 119/256 (46%), Gaps = 29/256 (11%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLIL 102
+ + + ++ +VP+P +R NTL+ + +L + + + +L P L +
Sbjct: 348 VSEAIEFFEANEVPRPVTIRTNTLR----ARRRDLAQALINRGVNLEPIGKWTNVGLQVF 403
Query: 103 PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK 162
+ P + G LQ +S + AL P+PG +VLD SAPG KT H+AALM+
Sbjct: 404 ESSVPIGATPEYLAGHYMLQAASSFLPVIALGPQPGERVLDMASAPGGKTTHMAALMQNT 463
Query: 163 GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222
G I A ELNK R + L + G N+ V D PK +LLD CSG+
Sbjct: 464 GVIFANELNKARTKSLTANVHRLGCKNVVVCSYDGREF-PK--VMGGFDRVLLDAPCSGT 520
Query: 223 GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVER---VVYST 277
G ++ AS T + TE + LS QK+ + A+ P + +VYST
Sbjct: 521 G--------VISKDASVKT-NKTERD-FTLLSHLQKQLILCAIDSVQPDSKTGGYLVYST 570
Query: 278 CSIHQVENEDVIKSVL 293
CS+ ENE V+ L
Sbjct: 571 CSVTVDENEAVVDYAL 586
>gi|423205796|ref|ZP_17192352.1| ribosomal RNA small subunit methyltransferase B [Aeromonas veronii
AMC34]
gi|404623187|gb|EKB20039.1| ribosomal RNA small subunit methyltransferase B [Aeromonas veronii
AMC34]
Length = 403
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/242 (32%), Positives = 115/242 (47%), Gaps = 19/242 (7%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVF 120
+PK RY+RVNTLK D L K+ V + V L + L +GC
Sbjct: 150 MPK-RYLRVNTLKCTRDELQAMLAKEQVTTIPVEGVETALQVTSDAALFRTKAFADGCFE 208
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
Q S +VAAAL PG +V+DAC+ G KT+H+AA+M+GKG+++A ++ + ++ LK
Sbjct: 209 QQDAGSQLVAAALEVAPGMRVIDACAGAGGKTLHIAAMMQGKGRLLAMDVEEWKLENLKQ 268
Query: 181 TIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +GA N+E V+ K+ A +LLD CSG G D A
Sbjct: 269 RARRAGAHNVETRVITSSKTVKRLKESADR----VLLDVPCSGLGVLKRNPDAKWRDTA- 323
Query: 239 GHTADPTEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
ERL L A Q++ L R++ +VY+TCSI EN + L
Sbjct: 324 ---------ERLPVLVALQEEILQRYSQMVKVGGLLVYATCSILPEENRLQVDKFLAANE 374
Query: 298 SF 299
+F
Sbjct: 375 NF 376
>gi|307102870|gb|EFN51136.1| hypothetical protein CHLNCDRAFT_8770, partial [Chlorella
variabilis]
Length = 425
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 79/230 (34%), Positives = 110/230 (47%), Gaps = 40/230 (17%)
Query: 107 DLHVHPLIVNGCVF---LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
D + L+V G V Q +A+ +V AAL P+PG +LDAC+APG K + A+ M+G+G
Sbjct: 193 DRGLQALLVEGLVQRGEAQDEAAGLVVAALDPQPGETLLDACAAPGGKALGAASRMRGRG 252
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDF-------------LNLDPKDPAYSEV 210
I A +L++ R+ L+ A + HGD L P+ P +
Sbjct: 253 LITALDLSRSRLAALRH-------AALRQPHGDMVRTFAADLRRFATLRYRPEGPPWQYD 305
Query: 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA--LSFP 268
R +LLD CSG+G A+R D E L +L+A Q + L A L P
Sbjct: 306 R-VLLDAPCSGTGVLAKRADLRWRRTP----------EELRQLAALQGELLDAAAGLVAP 354
Query: 269 GVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFL 318
G +VYSTCSI Q ENE + + L A G++L P GT Q L
Sbjct: 355 G-GLLVYSTCSIEQEENEQQVAAFL--ARQPGYELEA-VPAGTGVPPQCL 400
>gi|311029974|ref|ZP_07708064.1| sun protein [Bacillus sp. m3-13]
Length = 275
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/244 (29%), Positives = 123/244 (50%), Gaps = 22/244 (9%)
Query: 62 VPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVF 120
VP + R NT K DV+ + L Q F V+K +L + ++ G ++ NG +
Sbjct: 4 VPPHQSARANTAKADVEEVLQMLTTQGFNVEKGELAEESIVSLKG-NMAYSNAFKNGYMT 62
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q ++S +VA AL + V D C+APG KT H+A L+K G++++ +L++ +V+ +KD
Sbjct: 63 IQDESSMLVARALGVEKDDFVYDCCAAPGGKTTHIAELLKDSGRVISTDLHEHKVKLIKD 122
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVR--AILLDPSCSGSGTAAERLDHLLPSHAS 238
+ +NIE L+ + E + IL+D CSG G + D L S
Sbjct: 123 QAERLQLSNIE---AQALDSRKAQEIFKEEQFDKILVDAPCSGFGVIRRKPD--LKYTKS 177
Query: 239 GHTADPTEMERLNKLSAFQKKALRHALSFPGVER---VVYSTCSIHQVENEDVIKSVLPI 295
M+ + +L++ Q L+ P V++ +VYSTC+I + EN DV+++ L
Sbjct: 178 --------MQDIKQLASIQLAILKEVA--PLVKKGGTLVYSTCTIDKEENADVVQAFLEA 227
Query: 296 AMSF 299
F
Sbjct: 228 NKEF 231
>gi|147778971|emb|CAN71575.1| hypothetical protein VITISV_037193 [Vitis vinifera]
Length = 741
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 81/269 (30%), Positives = 123/269 (45%), Gaps = 35/269 (13%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP----DLLILPP 104
+LM L + + P+P +R NTLK D+ +L G V D L L++
Sbjct: 226 ELMELIEAFEKPRPICLRTNTLKTRRRDLADVLLNRG----VNLDPLSKWSKVGLVVYDS 281
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
+ P + G LQ +S + ALAP+ +++D +APG KT ++AALMK G
Sbjct: 282 QVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGM 341
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I A E+ + R++ L + G N V + D L PK ++ V +LLD CSG+G
Sbjct: 342 IFANEMKEPRLKSLTANLHRMGVTNTVVCNYDGKEL-PKVLGHNTVDRVLLDAPCSGTGV 400
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYSTCS 279
++ D + + S +E + K + QK+ + A+ +VYSTCS
Sbjct: 401 ISK--DESVKTSKS--------LEDIQKCAHLQKQLILAAIDMVDANSKSGGYIVYSTCS 450
Query: 280 IHQVENEDVIKSVL--------PIAMSFG 300
I ENE VI L P + FG
Sbjct: 451 IMIPENEAVIDYALKKRNVKLVPCGLDFG 479
>gi|319951686|ref|YP_004162953.1| fmu (sun) domain protein [Cellulophaga algicola DSM 14237]
gi|319420346|gb|ADV47455.1| Fmu (Sun) domain protein [Cellulophaga algicola DSM 14237]
Length = 408
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 82/262 (31%), Positives = 123/262 (46%), Gaps = 32/262 (12%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-----DLLILPPG 105
++L AL Q DV +R NTLK ++ L + + D P D L L
Sbjct: 141 KELNALNQQADV----ILRANTLKTTKEALRANLLENGI----DCEPIAGYTDALKLAER 192
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
++ NG +Q +S +VA L KPG +V+D C+ G KT+H+AALM+ KG++
Sbjct: 193 GNVFRTDAFQNGMFEVQDASSQLVAEFLDVKPGQRVIDTCAGAGGKTLHIAALMENKGQL 252
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+A ++ + +++ LK K +GA NIE D + K Y + IL+D C+G G
Sbjct: 253 IAMDIYENKLKELKRRAKRNGAFNIEPRVIDSTKVIKK--LYGKADRILIDAPCTGLGVL 310
Query: 226 AERLD---HLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVE-RVVYSTCSIH 281
D L P E L K+ A Q++ LR E ++VY+TCSI
Sbjct: 311 RRNPDAKWKLQP-------------EFLEKIMATQQEILRSYSKMLKPEGKMVYATCSIL 357
Query: 282 QVENEDVIKSVLPIAMSFGFQL 303
EN + +KS L F+L
Sbjct: 358 PQENNEQVKSFLASEEGRDFRL 379
>gi|452206544|ref|YP_007486666.1| tRNA/rRNA cytosine-C5-methylase [Natronomonas moolapensis 8.8.11]
gi|452082644|emb|CCQ35909.1| tRNA/rRNA cytosine-C5-methylase [Natronomonas moolapensis 8.8.11]
Length = 303
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 81/253 (32%), Positives = 113/253 (44%), Gaps = 26/253 (10%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVD-------SAVLELGKQFVVQKDDLVPDLLIL 102
++D A + P P VRVN +K D SA +E G V D L
Sbjct: 11 VDDPTAFHDACGRPLPSVVRVNGIKATPDRVRRAFESAGVEFGP--VGWHDGLFRLGGDE 68
Query: 103 PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK 162
PG + P V+G V+ Q + S++ A AL P PG +VLD C+APG+KT LAA M +
Sbjct: 69 SPG---NSWPF-VHGWVYGQEEVSAVPALALDPDPGERVLDCCAAPGSKTTQLAARMDDR 124
Query: 163 GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222
G +V + N R+ L+ + G N+ V D N K L+D CS
Sbjct: 125 GLLVGNDNNLGRLSALRSNAERCGVTNLVVTRADARNFSLKSFGGEAFDRTLVDVPCSCE 184
Query: 223 GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSI 280
GT + D L + M+ + ++ QK L AL PG VVYSTC+
Sbjct: 185 GTIRKNPDAL----------EDWSMDHVEGIAGVQKGILDRALEITRPG-GTVVYSTCTF 233
Query: 281 HQVENEDVIKSVL 293
ENE +++ L
Sbjct: 234 APEENEAIVQHAL 246
>gi|196007796|ref|XP_002113764.1| hypothetical protein TRIADDRAFT_26585 [Trichoplax adhaerens]
gi|190584168|gb|EDV24238.1| hypothetical protein TRIADDRAFT_26585 [Trichoplax adhaerens]
Length = 389
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 83/278 (29%), Positives = 122/278 (43%), Gaps = 37/278 (13%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLIL 102
I++L+ + +V +P +R NTLK S +L + + + +L P L++
Sbjct: 71 IKELIEFLEANEVERPVTIRTNTLK----SRRRDLAQALINRGVNLDPIGEWSKVGLIVF 126
Query: 103 PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK 162
+ P + G LQG +S + ALA +P KVLD CSAPG KT ++AALMK
Sbjct: 127 DSPVPIGATPEYLAGHYMLQGASSMLPVMALAAQPNEKVLDMCSAPGGKTTYIAALMKNT 186
Query: 163 GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222
G IVA ++NKER + L I G N V + + V LLD CSG+
Sbjct: 187 GMIVANDVNKERCKALTANIHRLGVVNTIVCSENGRQFPKIVGGFDRV---LLDAPCSGT 243
Query: 223 GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYST 277
G S + ++ E + L + S QK+ L A+ +VY T
Sbjct: 244 GVI---------SKDASVKSNKVEKDIL-RCSHIQKELLLSAIDSVDARSSTGGYIVYCT 293
Query: 278 CSIHQVENEDVIKSVL--------PIAMSFGFQLATPF 307
CSI E+E V+ L + FG + T F
Sbjct: 294 CSIMVEEDEWVVDYALKRRSVKLVSTGLEFGREGFTKF 331
>gi|139439007|ref|ZP_01772467.1| Hypothetical protein COLAER_01473 [Collinsella aerofaciens ATCC
25986]
gi|133775718|gb|EBA39538.1| NOL1/NOP2/sun family protein [Collinsella aerofaciens ATCC 25986]
Length = 367
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/235 (31%), Positives = 109/235 (46%), Gaps = 19/235 (8%)
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPG--CDLHVHPLIVNGCVF 120
+P +R NTLK + L + + PD ILP DL + +G ++
Sbjct: 70 RPVTLRANTLKATAEDIAAALDAAGIAHRPVAWYPDAFILPEAQVSDLWDLDIYRDGKIY 129
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
LQ +S M L + G +LD C+APG KT +AAL + + + ACE++ R +L+
Sbjct: 130 LQSLSSMMPPLVLGAQAGEDILDMCAAPGGKTTQIAALTQSQAHLTACEMSIPRAEKLES 189
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+ GA N+ V+ D LD + ILLD C+G+GT + L G
Sbjct: 190 NLHRQGAKNVPVMRIDARELD----EFFRFDRILLDAPCTGTGTVISGNEKSL----RGL 241
Query: 241 TADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
T + L K + Q+ L A+ PG +VYSTCSI ENED ++ L
Sbjct: 242 TE-----QLLGKCARSQRALLDRAMGALKPG-GTLVYSTCSIMPQENEDALQEAL 290
>gi|407796647|ref|ZP_11143600.1| Sun protein [Salimicrobium sp. MJ3]
gi|407019163|gb|EKE31882.1| Sun protein [Salimicrobium sp. MJ3]
Length = 450
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 117/247 (47%), Gaps = 18/247 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLH 109
E ++ T + P +RV L + AV EL + F V++ +IL G ++
Sbjct: 167 ETTESMCMTNQLRMPESIRVQPLLLSRGEAVTELERDGFEVEESRFSSQGIILHEG-NII 225
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
H L G V +Q ++S +VA + P+PG VLDAC+APG KT H++ MK +G + A +
Sbjct: 226 KHRLFREGLVTIQDQSSMLVAELMNPEPGQTVLDACAAPGGKTTHISEKMKNEGTVYAYD 285
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
L+K++ +++ + NI + D L K + +L+D CSG G +
Sbjct: 286 LHKKKAALIREKANILRLTNIHAENYDARKLQDKHENET-FDHVLVDAPCSGFGVIRSKP 344
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA---LSFPGVERVVYSTCSIHQVENE 286
D + E + +L Q L H L G+ +VYSTC++ + EN+
Sbjct: 345 D----------IKYSKKEEDIYRLREVQDHILDHVAPLLKENGL--LVYSTCTVDRHEND 392
Query: 287 DVIKSVL 293
+ ++ L
Sbjct: 393 EAVRDFL 399
>gi|342218721|ref|ZP_08711327.1| ribosomal RNA small subunit methyltransferase B [Megasphaera sp.
UPII 135-E]
gi|341589097|gb|EGS32463.1| ribosomal RNA small subunit methyltransferase B [Megasphaera sp.
UPII 135-E]
Length = 445
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 28/275 (10%)
Query: 44 RNKVKSIEDLMALY-QTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLI 101
R +K EDL A + + P++ +R+ T ++ + + L + + +K +VP+ +
Sbjct: 161 RFGMKETEDLCAYFDKVPEL----CLRLQTNRISIVEGMQILDQAGISYRKGKVVPECIY 216
Query: 102 LPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG 161
+ + PL+ G +Q +AS +VA + P+PG ++DAC+APG KT HLA L
Sbjct: 217 ITTSQAIESIPLLREGKALIQDEASQLVAHIVDPQPGEIIVDACAAPGGKTTHLATLGGK 276
Query: 162 KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSG 221
+ C++ +++ +++ G ANI + D L + A ++ +L+D CSG
Sbjct: 277 TAIVYGCDIYTHKLKLIEENASRLGLANIRTIQQDARQLGQQFLAKAD--RVLVDAPCSG 334
Query: 222 SGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA-LSFPGVERVVYSTCSI 280
G +LD E + L A QK+ L A + +VYSTC++
Sbjct: 335 LGILRHKLDLRWRK----------EEKDTRILPALQKQILEGASVCVKDGGLLVYSTCTM 384
Query: 281 HQVENEDVIKSVL---------PIAMSFGFQLATP 306
+ EN+DV++ L PIA++ G P
Sbjct: 385 NPAENQDVVQYFLQRHPEFTLEPIALTAGLTKKGP 419
>gi|116333508|ref|YP_795035.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus brevis ATCC 367]
gi|116098855|gb|ABJ64004.1| tRNA and rRNA cytosine-C5-methylase [Lactobacillus brevis ATCC 367]
Length = 452
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 60/180 (33%), Positives = 96/180 (53%), Gaps = 15/180 (8%)
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 175
+G V+ Q ++ V A APK G +VLD C+APG KT HLA+ ++G G +V E+N++RV
Sbjct: 73 SGAVYSQEPSAMFVGATAAPKVGERVLDLCAAPGGKTTHLASYLQGTGLLVTNEINRKRV 132
Query: 176 RRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
+ L + ++ G N + + L P P Y + +L+D CSG G R D +
Sbjct: 133 KVLAENVERFGVPNAVIFNDAPEQLSPVFPDYFD--KVLVDAPCSGEGMF--RKDPAAMT 188
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+ S ++ +N +A Q+ L AL PG +++YSTC+ E+E ++ VL
Sbjct: 189 YWS--------LDYVNDCAARQRDILTEALKMVKPG-GQLIYSTCTFAPEEDEQMMAWVL 239
>gi|443310715|ref|ZP_21040357.1| ribosomal RNA small subunit methyltransferase RsmB [Synechocystis
sp. PCC 7509]
gi|442779240|gb|ELR89491.1| ribosomal RNA small subunit methyltransferase RsmB [Synechocystis
sp. PCC 7509]
Length = 446
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 100/200 (50%), Gaps = 18/200 (9%)
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
P +G +Q ++ +V+ L P+ G ++DAC+APG KT H+A LM +G I AC+
Sbjct: 229 PGFNDGWWTVQDSSAQLVSHLLDPQSGEFIIDACAAPGGKTTHIAELMGDQGTIWACDRT 288
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
R+R+L+ K +I++ GD + + + +LLD CSG GT
Sbjct: 289 ASRLRKLQQNTKRLQLKSIQIQVGDSRHF---EQFIDKCDRLLLDVPCSGLGT------- 338
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVI 289
L HA + + +LS Q + + F PG +VYSTC++H ENE++I
Sbjct: 339 -LNRHADARWRQTP--QSIQELSLLQAELISQGALFVKPG-GVMVYSTCTLHPQENENII 394
Query: 290 KSVLPIAMSFGFQLATPFPN 309
+ L A + +Q+ P PN
Sbjct: 395 ANFL--AQNTNWQIEPPAPN 412
>gi|322418095|ref|YP_004197318.1| sun protein [Geobacter sp. M18]
gi|320124482|gb|ADW12042.1| sun protein [Geobacter sp. M18]
Length = 479
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 116/247 (46%), Gaps = 15/247 (6%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDL 108
+E AL P P +RVNTL++ ++ + L ++ + + PD + L +
Sbjct: 196 VEGAEALAAAMSEPPPFTIRVNTLRISREALMARLAEEGISCSETRWSPDGIRLNQSGQI 255
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G +Q ++S + L+P+ G +VLDACSAPG KT +A LM G+I AC
Sbjct: 256 TRLPSFRDGLFTVQDESSQLAPLFLSPEKGDRVLDACSAPGGKTTQIAQLMGNSGEIYAC 315
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV--RAILLDPSCSGSGTAA 226
++N +++R +K+T G ++ D + PA EV + IL+D CSG G
Sbjct: 316 DVNHKKLRLIKETCDRLGITSVRTFTMDATS---PSPAIKEVTFQRILVDAPCSGLGVIR 372
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
P + D + +++ + L L G ++Y+TCS ENE
Sbjct: 373 RN-----PEGKWSKSPDDLLQQARTQVTILEN--LCKYLDKSGT--LLYATCSTSVQENE 423
Query: 287 DVIKSVL 293
VI + L
Sbjct: 424 YVIDTFL 430
>gi|425775228|gb|EKV13508.1| Nucleolar RNA methyltransferase (Nop2), putative [Penicillium
digitatum Pd1]
gi|425779664|gb|EKV17704.1| Nucleolar RNA methyltransferase (Nop2), putative [Penicillium
digitatum PHI26]
Length = 732
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 79/247 (31%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 54 MALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPPGC 106
A ++ + P+P +R NTL+ + S L + VV L P L +
Sbjct: 273 FAFFEANETPRPVVIRTNTLRTNRRSLAQALINRGVV----LEPVGKWSKVGLQVFESPV 328
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
L P + G LQ +S + ALAP+P +VLD SAPG KT +++ALM+ G +V
Sbjct: 329 PLGATPEYLAGHYILQAASSFLPVMALAPQPNERVLDMASAPGGKTTYMSALMRNTGCVV 388
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + +K R + L I G N V + D PK A +LLD C+G+G +
Sbjct: 389 ANDASKPRAKGLIGNIHRLGCKNTIVTNMDARTAFPK--AMGGFDRVLLDAPCTGTGVIS 446
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
+ + A P M+R L+A ++ HA G VVYSTCS+ ENE
Sbjct: 447 KDPGVKTSKNERDFLAIP-HMQRQLLLAAID--SVDHASKTGGY--VVYSTCSVTVEENE 501
Query: 287 DVIKSVL 293
V++ VL
Sbjct: 502 AVVQYVL 508
>gi|51892487|ref|YP_075178.1| hypothetical protein STH1349 [Symbiobacterium thermophilum IAM
14863]
gi|51856176|dbj|BAD40334.1| conserved hypothetical protein [Symbiobacterium thermophilum IAM
14863]
Length = 459
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 86/301 (28%), Positives = 138/301 (45%), Gaps = 22/301 (7%)
Query: 18 WP--VGDAEKFLMLHKGAIQLALAQLLVR-NKVKSIEDLMALYQTPDVPKPRYVRVNTLK 74
WP D + L + + +AQ L R + +++ L A Q P P VRVN LK
Sbjct: 142 WPDEAADPVRALAVQHSYPEWLVAQWLERFGRGEAVRLLEAGNQVP----PLTVRVNRLK 197
Query: 75 MDVDSAVLELGKQFV-VQKDDLVPDLLI---LPPGCDLHVHPLIVNGCVFLQGKASSMVA 130
+ A L + V + P LI L L + G + +Q ++S + A
Sbjct: 198 ATREEAAAALAAEGVRTEPTRHSPQGLIIQDLTSASSLERLEAMKQGLITVQDESSMLAA 257
Query: 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190
A L P+PGW V+D +APG K HLA LM +G+++A +++ +V +++ + G +
Sbjct: 258 AVLNPQPGWMVIDVAAAPGGKATHLAELMDNRGRVIALDIHPHKVALIEENAERLGTTIV 317
Query: 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250
E + D + P ++ A+L D CSG GT A R D + P ++E L
Sbjct: 318 EAVCLDARRVGEAMPERAD--AVLCDLPCSGLGTLARRPD-------ARWRKSPEDVEAL 368
Query: 251 NKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNG 310
+ ++ AL GV +VYSTC+I ENE++++ + F F + G
Sbjct: 369 VPIQRAILESAAKALKPGGV--LVYSTCTIQPKENEELVEGFVADHPEFRFDRVWDYLPG 426
Query: 311 T 311
T
Sbjct: 427 T 427
>gi|282163719|ref|YP_003356104.1| NOL1/NOP2/sun family putative RNA methylase [Methanocella
paludicola SANAE]
gi|282156033|dbj|BAI61121.1| NOL1/NOP2/sun family putative RNA methylase [Methanocella
paludicola SANAE]
Length = 320
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 132/288 (45%), Gaps = 35/288 (12%)
Query: 40 QLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPD 98
+ +V + + DL + + P Y+RVNTL+++ ++ L K F +++ D +PD
Sbjct: 25 EYMVARFERFVPDLEKFLASMEAPPRTYIRVNTLRINANALTKRLTDKGFTLRETD-IPD 83
Query: 99 LLILPPGCDLHVHPLIVN-------GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNK 151
L ++ P + G ++Q K+S + ALAP+PG V+D ++PG K
Sbjct: 84 CL------EVTAEPYSIGASAEYLLGYFYVQDKSSVIPPLALAPQPGDVVIDMAASPGGK 137
Query: 152 TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 211
T LA +M KG ++A E+ R+ L+ + G N + H +D +D EV+
Sbjct: 138 TTQLAQMMDNKGLLIAIEVEIARIAGLRSNLGRCGVMNTALFH-----MDARDIKKLEVK 192
Query: 212 A--ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269
A ILLD C+G G A+ + ++++ + L A + G
Sbjct: 193 ADKILLDAPCTGEGVIAK-------DRTRKTSRGESDIQFCSGLQEELIDAAYACMKPGG 245
Query: 270 VERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQF 317
V +VYSTCS ENE ++ ++ +G ++ P P G F
Sbjct: 246 V--LVYSTCSFAPEENERIVDHLIK---KYGMKV-EPVPYGEPGIESF 287
>gi|448357897|ref|ZP_21546592.1| RNA methylase [Natrialba chahannaoensis JCM 10990]
gi|445648205|gb|ELZ01167.1| RNA methylase [Natrialba chahannaoensis JCM 10990]
Length = 302
Score = 91.3 bits (225), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 75/249 (30%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
I+D A + P VRVNT+K + A L + V ++ + P +L L PG
Sbjct: 11 IDDFEAFLAACERPLGNAVRVNTIKSSPERATATLEEDDVAYEQAEWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K LAALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPVVLDPQPGERVWDCCAAPGGKATQLAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N K + E L+D CS GT
Sbjct: 127 VANDNNLGRISALRFNAERLGATSLAVTNDDARNYSMKRFPFDEFDRTLVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVE 284
+ D L + + GH ++ ++ QK LR A+ + VVYSTC+ E
Sbjct: 187 RKNPD-ALDNWSEGH---------IDTIAGIQKGILRRAIQTTREGGTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V++ +
Sbjct: 237 NEAVVQHAI 245
>gi|336235521|ref|YP_004588137.1| RNA methylase [Geobacillus thermoglucosidasius C56-YS93]
gi|335362376|gb|AEH48056.1| RNA methylase, NOL1/NOP2/sun family [Geobacillus
thermoglucosidasius C56-YS93]
Length = 463
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 20/270 (7%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMA-LYQTPDVPKPRYVRVNTLKMDVDSAVLELGK 86
M KG L L + + +++ + + T D K +R N LK D ++ + +
Sbjct: 1 MDQKGVGSLKLPSEFIAKMERLLQNEASRFFSTYDEEKVNGLRFNPLKTDRETFLTLV-- 58
Query: 87 QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACS 146
F + P G HP G ++Q ++ VA LAP PG VLD C+
Sbjct: 59 PFALSPVPFCPTGFYYDGGEQPGKHPYHAAGLYYIQEPSAMFVAEVLAPNPGETVLDLCA 118
Query: 147 APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 206
APG KT LAA+MK +G IVA E++ +RV+ L + I+ G N V + L P
Sbjct: 119 APGGKTTQLAAMMKNQGLIVANEIHPKRVKALSENIERFGITNALVTNETPEKLAKYFPG 178
Query: 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
+ + IL+D CSG G + + + + H + + ++ Q+ L A S
Sbjct: 179 FFD--KILVDAPCSGEGM-FRKDEEAVRFWSQAH---------VEQCASKQRHILDCAYS 226
Query: 267 F---PGVERVVYSTCSIHQVENEDVIKSVL 293
GV +VYSTC+ ENE +I++ L
Sbjct: 227 MLKEGGV--LVYSTCTFSPEENEQMIEAFL 254
>gi|154303546|ref|XP_001552180.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Botryotinia fuckeliana
B05.10]
gi|347840919|emb|CCD55491.1| hypothetical protein [Botryotinia fuckeliana]
Length = 718
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 87/256 (33%), Positives = 119/256 (46%), Gaps = 39/256 (15%)
Query: 55 ALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
A ++ + P+P +R NTL+ D+ A++ G VV L P L I
Sbjct: 297 AFFEANETPRPVVIRTNTLRTHRRDLAQALINRG---VV----LEPVGKWSKVGLQIFES 349
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G LQ +S + ALAP+ +VLD SAPG KT H+AALMK G
Sbjct: 350 AVPLGATPEYLAGHYILQAASSFLPVMALAPQENERVLDMASAPGGKTTHIAALMKNTGC 409
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I A + NK R + L I GA N+ V + D P+ +LLD CSG+G
Sbjct: 410 IFANDSNKSRAKGLIGNIHRLGAKNVIVCNYDAREF-PR--VIGGFDRVLLDAPCSGTGV 466
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK-------ALRHALSFPGVERVVYST 277
A+ AS T + TE + L L QK+ ++ HA G +VYST
Sbjct: 467 IAK--------DASVKT-NKTERDFL-MLPHLQKQLLLSAIDSVDHASKTGGY--IVYST 514
Query: 278 CSIHQVENEDVIKSVL 293
CS+ ENE V++ VL
Sbjct: 515 CSVTVEENEQVVQYVL 530
>gi|282850140|ref|ZP_06259519.1| ribosomal RNA small subunit methyltransferase B [Veillonella
parvula ATCC 17745]
gi|294793653|ref|ZP_06758790.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
3_1_44]
gi|416998935|ref|ZP_11939604.1| ribosomal RNA small subunit methyltransferase B [Veillonella
parvula ACS-068-V-Sch12]
gi|282579633|gb|EFB85037.1| ribosomal RNA small subunit methyltransferase B [Veillonella
parvula ATCC 17745]
gi|294455223|gb|EFG23595.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
3_1_44]
gi|333977088|gb|EGL77947.1| ribosomal RNA small subunit methyltransferase B [Veillonella
parvula ACS-068-V-Sch12]
Length = 451
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 123/243 (50%), Gaps = 22/243 (9%)
Query: 64 KPRYV-RVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPL--IVNGCV 119
+PR R+NT+K+ ++ + EL ++V++D +P+++ + G H+ ++ G +
Sbjct: 185 QPRLTARINTVKVSIEDCLKELEDLDWIVEQDTYIPEVVYID-GHQGHLEKAKPVLEGHI 243
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
KAS +VA + P+PG +LD C+APG K++H+A+LM G I++C++ ++ +
Sbjct: 244 TFMDKASMLVAHVVDPQPGELILDCCAAPGGKSMHMASLMNNTGAIMSCDIYDHKLELIN 303
Query: 180 DTIKLSGAANI--EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
+ G + I ++ G +L D + +L+D CSG G ++LD
Sbjct: 304 QNAERLGVSIISTKLQDGRYL----PDNWKEQFDRVLVDAPCSGLGILQKKLDMRWRKTE 359
Query: 238 SGHTA-DPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIA 296
S P ++E L K S K G +VYSTC+++ ENE V+ L I
Sbjct: 360 SLLIELPPLQLEILEKASEMVK--------VNGY--LVYSTCTMNSGENEAVLNKFLAIH 409
Query: 297 MSF 299
+F
Sbjct: 410 KNF 412
>gi|312111072|ref|YP_003989388.1| RNA methylase, NOL1/NOP2/sun family [Geobacillus sp. Y4.1MC1]
gi|423720077|ref|ZP_17694259.1| RNA methylase, NOL1/NOP2/sun family [Geobacillus thermoglucosidans
TNO-09.020]
gi|311216173|gb|ADP74777.1| RNA methylase, NOL1/NOP2/sun family [Geobacillus sp. Y4.1MC1]
gi|383366839|gb|EID44124.1| RNA methylase, NOL1/NOP2/sun family [Geobacillus thermoglucosidans
TNO-09.020]
Length = 463
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 123/270 (45%), Gaps = 20/270 (7%)
Query: 28 MLHKGAIQLALAQLLVRNKVKSIEDLMA-LYQTPDVPKPRYVRVNTLKMDVDSAVLELGK 86
M KG L L + + +++ + + T D K +R N LK D ++ + +
Sbjct: 1 MDQKGVGSLKLPSEFIAKMERLLQNEASRFFSTYDEEKVNGLRFNPLKTDRETFLTLV-- 58
Query: 87 QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACS 146
F + P G HP G ++Q ++ VA LAP PG VLD C+
Sbjct: 59 PFALSPVPFCPTGFYYDGGEQPGKHPYHAAGLYYIQEPSAMFVAEVLAPNPGETVLDLCA 118
Query: 147 APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 206
APG KT LAA+MK +G IVA E++ +RV+ L + I+ G N V + L P
Sbjct: 119 APGGKTTQLAAMMKNQGLIVANEIHPKRVKALSENIERFGITNALVTNETPEKLAKYFPG 178
Query: 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266
+ + IL+D CSG G + + + + H + + ++ Q+ L A S
Sbjct: 179 FFD--KILVDAPCSGEGM-FRKDEEAVRFWSQAH---------VEQCASKQRHILDCAYS 226
Query: 267 F---PGVERVVYSTCSIHQVENEDVIKSVL 293
GV +VYSTC+ ENE +I++ L
Sbjct: 227 MLKEGGV--LVYSTCTFSPEENEQMIEAFL 254
>gi|255955391|ref|XP_002568448.1| Pc21g14330 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211590159|emb|CAP96330.1| Pc21g14330 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 733
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 116/249 (46%), Gaps = 18/249 (7%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ + S L + VV L P L +
Sbjct: 272 EAFAFFEANETPRPVVIRTNTLRTNRRSLAQALINRGVV----LEPVGKWSKVGLQVFES 327
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G LQ +S + ALAP+P +VLD SAPG KT +++ALM+ G
Sbjct: 328 PVPLGATPEYLAGHYILQAASSFLPVMALAPQPNERVLDMASAPGGKTTYMSALMRNTGC 387
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
+VA + +K R + L I G N V + D PK A +LLD C+G+G
Sbjct: 388 VVANDASKPRAKGLIGNIHRLGCKNTIVTNMDARTAFPK--AMGGFDRVLLDAPCTGTGV 445
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
++ + A P M+R L+A ++ HA G +VYSTCS+ E
Sbjct: 446 ISKDPGVKTSKNERDFLAIP-HMQRQLLLAAID--SVDHASKTGGY--IVYSTCSVTVEE 500
Query: 285 NEDVIKSVL 293
NE V++ VL
Sbjct: 501 NEAVVQYVL 509
>gi|293396403|ref|ZP_06640681.1| rRNA (cytosine-C(5)-)-methyltransferase RsmF [Serratia odorifera
DSM 4582]
gi|291421192|gb|EFE94443.1| rRNA (cytosine-C(5)-)-methyltransferase RsmF [Serratia odorifera
DSM 4582]
Length = 479
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 85/261 (32%), Positives = 126/261 (48%), Gaps = 40/261 (15%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKMDVD-------------SAVLELGKQFVVQKDDL 95
S+ED +A Q P R +RVNTLK+ VD + + + F + +DD
Sbjct: 26 SMEDFIAACQRP---LRRSIRVNTLKISVDGFLALVKDYDWQLAPIPWCAEGFWITRDD- 81
Query: 96 VPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAAL--APKPGWKVLDACSAPGNKTV 153
D L L + ++G ++Q +S + +AL A + +VLD +APG+KT
Sbjct: 82 --DALRLGSAAEH------LSGLFYIQEASSMLPVSALFSAGETPRRVLDVAAAPGSKTT 133
Query: 154 HLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213
+AALM +G IVA E + RV+ L + G N + H D P AI
Sbjct: 134 QIAALMNNRGGIVANEYSASRVKVLHANLSRCGVKNAALTHFDGRVFGAALP--ESFDAI 191
Query: 214 LLDPSCSGSGTAAERLDHLLP-SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER 272
LLD CSG G + D + S S H+ T+ + ++ SAF HAL+ GV
Sbjct: 192 LLDAPCSGEGVVRKDPDAMSNWSPESVHSIAETQRQLID--SAF------HALAPGGV-- 241
Query: 273 VVYSTCSIHQVENEDVIKSVL 293
+VYSTC+++ EN+ VI S+L
Sbjct: 242 MVYSTCTLNAQENQQVINSLL 262
>gi|239626556|ref|ZP_04669587.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239516702|gb|EEQ56568.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 447
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 113/226 (50%), Gaps = 16/226 (7%)
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122
+P +VR N + ++ + L Q V+ K+ D +P +L + + NG + +Q
Sbjct: 180 RPTWVRCNLSRALREAILKSLDSQGVMVKELDCLPSVLAISGYDYMEGLECFQNGWIQVQ 239
Query: 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182
S+ V PK G ++D C+APG K++HLA MKG G + A +L+ ++ +++ +
Sbjct: 240 DATSAFVGELADPKEGDYIIDVCAAPGGKSLHLADKMKGTGMVEARDLSYQKTALIEENV 299
Query: 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
SGAANI+ + D L P + A + ++ D CSG G ++ P T
Sbjct: 300 ARSGAANIKAVVWDALV--PDEDAREKADIVIADLPCSGLGIIGKK-----PDIKYNMT- 351
Query: 243 DPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENE 286
M+++ +LS Q+ L + PG +VYSTC+I +ENE
Sbjct: 352 ----MDKMRELSRLQRDILSVVWQYVKPG-GTLVYSTCTIDPMENE 392
>gi|258571405|ref|XP_002544506.1| nucleolar protein NOP2 [Uncinocarpus reesii 1704]
gi|237904776|gb|EEP79177.1| nucleolar protein NOP2 [Uncinocarpus reesii 1704]
Length = 1027
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 77/249 (30%), Positives = 115/249 (46%), Gaps = 18/249 (7%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ + S L + VV L P L +
Sbjct: 247 EAFAFFEANETPRPVVIRTNTLRTNRRSLAQALINRGVV----LEPVGKWSKVGLQVFES 302
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G LQ +S + ALAP+P ++LD +APG KT +++ALM+ G
Sbjct: 303 PVPLGATPEYLAGHYILQAASSFLPVMALAPQPHERILDMAAAPGGKTTYMSALMRNTGC 362
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
++A + NKER + L I G N V + D PK A +LLD CSG+G
Sbjct: 363 VMANDANKERAKGLIGNIHRLGCKNTIVTNLDARTAFPK--ALGGFDRVLLDAPCSGTGV 420
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVE 284
++ A P ++L L+A + HA G +VYSTCS+ E
Sbjct: 421 ISKDPSVKTSKTERDFMAIPHTQKQL-LLAAID--STNHASKTGGY--IVYSTCSVAVEE 475
Query: 285 NEDVIKSVL 293
NE V++ VL
Sbjct: 476 NEAVVQYVL 484
>gi|228475051|ref|ZP_04059779.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
hominis SK119]
gi|314936621|ref|ZP_07843968.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
hominis subsp. hominis C80]
gi|418620475|ref|ZP_13183279.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
hominis VCU122]
gi|228271036|gb|EEK12424.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
hominis SK119]
gi|313655240|gb|EFS18985.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
hominis subsp. hominis C80]
gi|374822605|gb|EHR86625.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
hominis VCU122]
Length = 435
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/245 (32%), Positives = 120/245 (48%), Gaps = 28/245 (11%)
Query: 68 VRVNTLKMDVDS---AVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGK 124
VRVNT + DV++ A+L+ G + V D L+P L L G + +G + +Q K
Sbjct: 179 VRVNTSRTDVETISKALLQEG--YHVDIDQLIPYCLHLT-GKPVIESRAFKDGLISIQDK 235
Query: 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184
+S +V + + +LDACSAPG K H+A L+ G + A +++K ++ +K+ IK
Sbjct: 236 SSMLVGYLMDVQKDDTILDACSAPGGKACHMAELLASTGHVDATDIHKHKIGLIKENIKK 295
Query: 185 SGAANIEVLHGDFLNLDPKDPAYSEVR-AILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
N+ + D P YSE+ IL+D CSG G + P + D
Sbjct: 296 LKLKNVST-----FDHDATKP-YSELYDKILVDAPCSGLGVLKHK-----PEIKYVQSKD 344
Query: 244 PTEMERLNKLSAFQKKAL---RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFG 300
+N L Q L +H L PG ++YSTC+I Q+ENE+VI + L F
Sbjct: 345 S-----INDLVEIQLSILDNVKHNLK-PG-GSLIYSTCTIEQMENENVIYTFLKENKDFE 397
Query: 301 FQLAT 305
F+L T
Sbjct: 398 FELIT 402
>gi|238485520|ref|XP_002373998.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Aspergillus flavus NRRL3357]
gi|220698877|gb|EED55216.1| nucleolar RNA methyltransferase (Nop2), putative [Aspergillus
flavus NRRL3357]
Length = 751
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/256 (30%), Positives = 115/256 (44%), Gaps = 36/256 (14%)
Query: 54 MALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPPGC 106
A ++ + P+P +R NTL+ + S L + VV L P L +
Sbjct: 287 FAFFEANETPRPVVIRTNTLRTNRRSLAQALINRGVV----LEPVGKWSKVGLQVFESAV 342
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
L P + G LQ +S + ALAP+P +VLD SAPG KT +++ALM+ G ++
Sbjct: 343 PLGATPEYLAGHYILQAASSFLPVMALAPQPNERVLDMASAPGGKTTYISALMRNTGCVI 402
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG--- 223
A + +K R + L I G N V H D PK A +LLD C+G+G
Sbjct: 403 ANDASKPRAKGLIGNIHRLGCKNTLVTHLDARTAFPK--AMGGFDRVLLDAPCTGTGVIS 460
Query: 224 ------TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYST 277
T+ D L H M+R L+A ++ H+ G +VYST
Sbjct: 461 KDPAVKTSKTERDFLAIPH----------MQRQLLLAAID--SVDHSSKTGGY--IVYST 506
Query: 278 CSIHQVENEDVIKSVL 293
CS+ ENE V++ VL
Sbjct: 507 CSVTVEENEAVVQYVL 522
>gi|257051428|ref|YP_003129261.1| RNA methylase, NOL1/NOP2/sun family [Halorhabdus utahensis DSM
12940]
gi|256690191|gb|ACV10528.1| RNA methylase, NOL1/NOP2/sun family [Halorhabdus utahensis DSM
12940]
Length = 302
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 81/250 (32%), Positives = 112/250 (44%), Gaps = 21/250 (8%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILP---PG 105
ED P P VRVNTLK V+ A L + + + D LL LP PG
Sbjct: 11 FEDWSGFRAACRRPLPSVVRVNTLKTTVERAKTALETEGITYETVDWHDGLLRLPDDNPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ V G + Q + S++ L P PG +V DA +APG+KT LAALM +G I
Sbjct: 71 SNWP----YVQGWLHGQEEVSALPPVVLDPDPGDRVWDATAAPGSKTTQLAALMDDEGAI 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + G N+ V + D N K + L+D CS GT
Sbjct: 127 VATDNNLGRLSALRSNAERLGVTNLAVTNEDARNHSLKPFDGRQYDHALVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQV 283
+ D L ++ ++ ++ QK LR A+ PG VVYSTC+
Sbjct: 187 RKNPDALA----------QWSLDHVSGIAGAQKGILRRAVEVTKPG-GTVVYSTCTFAPE 235
Query: 284 ENEDVIKSVL 293
ENE V+ L
Sbjct: 236 ENEAVLDHAL 245
>gi|268315920|ref|YP_003289639.1| Fmu (Sun) domain-containing protein [Rhodothermus marinus DSM 4252]
gi|262333454|gb|ACY47251.1| Fmu (Sun) domain protein [Rhodothermus marinus DSM 4252]
Length = 434
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 76/242 (31%), Positives = 114/242 (47%), Gaps = 30/242 (12%)
Query: 63 PKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCV 119
P P VRVNTLK D V +LE G F + P LIL + G
Sbjct: 162 PAPLTVRVNTLKADRGTVQQRLLEEG--FPSRPTPYSPVGLILEEKAFIFRTRAFQEGLF 219
Query: 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179
+Q + S +++ +PG V+D C+ G KT+HLAALM+GKG++ A ++++ R+R L+
Sbjct: 220 EVQDEGSQLISLLTEARPGQVVVDGCAGGGGKTLHLAALMEGKGRLYAFDIHEARLRELR 279
Query: 180 DTIKLSGAANIEVLHGDFLNLDPKDPA------YSEVRAILLDPSCSGSGTAAERLDHLL 233
+ + N+ L++ P + A Y + A+L+D CSG+G D
Sbjct: 280 PRTRRADVHNVR------LHVLPHNRASIVRRLYGKADAVLVDAPCSGTGVLRRNPD--- 330
Query: 234 PSHASGHTADPTEMERLNKLSAFQKKALR--HALSFPGVERVVYSTCSIHQVENEDVIKS 291
A ER+ L Q++ L L PG R+VY+TCS+ ENE I +
Sbjct: 331 -------AAWKITPERVAALVEQQRQILEAYAPLVRPG-GRLVYATCSLLPAENEQQIHT 382
Query: 292 VL 293
L
Sbjct: 383 FL 384
>gi|86133711|ref|ZP_01052293.1| NOL1/NOP2/sun family protein [Polaribacter sp. MED152]
gi|85820574|gb|EAQ41721.1| NOL1/NOP2/sun family protein [Polaribacter sp. MED152]
Length = 404
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 104/199 (52%), Gaps = 15/199 (7%)
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
PD LIL ++ NG +Q +S +VAA L KPG KV+D C+ G KT+HL+
Sbjct: 184 PDALILEERANVFRTEAFHNGFFEVQDASSQLVAAYLDVKPGMKVVDTCAGAGGKTLHLS 243
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
ALM+ KG+++A ++ + ++R+LK K + A NI++ D + P + + +L+D
Sbjct: 244 ALMENKGQVIAMDIYESKLRKLKVRAKRNKAHNIDLRVID--STKPIKKLHGKADRVLID 301
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR--HALSFPGVERVV 274
CSG G D S P ++ + K+ Q++ L+ + PG ++V
Sbjct: 302 APCSGLGVIRRNPD-------SKWKLQPEFIDNIKKV---QQEILQSYSKMVKPG-GKLV 350
Query: 275 YSTCSIHQVENEDVIKSVL 293
Y+TCSI EN+D + L
Sbjct: 351 YATCSILPSENQDQVNEFL 369
>gi|410696437|gb|AFV75505.1| tRNA/rRNA cytosine-C5-methylase [Thermus oshimai JL-2]
Length = 454
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 113/246 (45%), Gaps = 20/246 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
E+ A ++ P+ +R NTLK+ + L+ + ++ P+ P
Sbjct: 16 EEYPAFWKALTGPRTYGLRTNTLKLSPED--LKALAPWPLRPIPWCPEGFYYPEEARPGP 73
Query: 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL 170
HP G ++Q ++ V L PKPG +VLD +APG KT HL A M+GKG ++A E+
Sbjct: 74 HPFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLLARMEGKGLLLANEV 133
Query: 171 NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---DPAYSEVRAILLDPSCSGSGTAAE 227
+ +RVR L + ++ GA+ + + PK + +LLD CSG G
Sbjct: 134 DGKRVRGLLENVERWGASPL------VTQVPPKALLERFAGYFHRVLLDAPCSGEGMF-- 185
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENED 287
R D H P+ R+ +L A L+ GV +VYSTC+ ENE
Sbjct: 186 RKDEEARRHWG-----PSAPRRMAELQAGLLSLSVRLLAPGGV--LVYSTCTFAPEENEG 238
Query: 288 VIKSVL 293
V+ VL
Sbjct: 239 VVARVL 244
>gi|401679779|ref|ZP_10811703.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
ACP1]
gi|400218906|gb|EJO49777.1| ribosomal RNA small subunit methyltransferase B [Veillonella sp.
ACP1]
Length = 452
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 120/246 (48%), Gaps = 18/246 (7%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPP-GCDL 108
EDL A + + PK R+NT+ +D+ + L +Q + V +D D++ + L
Sbjct: 177 EDLCAWFN--EQPKLT-ARINTILIDIPQCLTMLNEQGWAVTQDSNYEDIIYINSHRGSL 233
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
+ G + KAS +VA + P+PG ++LD C+APG K++++A LM G +++C
Sbjct: 234 EKSEAFIKGYITFMDKASMLVARLVNPQPGERILDCCAAPGGKSMYMATLMDNVGSLMSC 293
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
++++ ++ + GA+ + D L D S +L+D CSG G ++
Sbjct: 294 DIHEHKIELMNSNADRLGASIVHTKVQDATKL--PDSWNSYFDRVLVDAPCSGLGILQKK 351
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKAL-RHALSFPGVERVVYSTCSIHQVENED 287
LD S L +L Q L R A++ ++YSTC+++ ENE+
Sbjct: 352 LDMRWRKQES----------ILRELPPLQLAILERAAMTVKEKGYLIYSTCTLNYKENEE 401
Query: 288 VIKSVL 293
V++S L
Sbjct: 402 VVESFL 407
>gi|347523381|ref|YP_004780951.1| Fmu (Sun) domain containing protein [Pyrolobus fumarii 1A]
gi|343460263|gb|AEM38699.1| Fmu (Sun) domain protein [Pyrolobus fumarii 1A]
Length = 477
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 73/230 (31%), Positives = 116/230 (50%), Gaps = 18/230 (7%)
Query: 69 RVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASS 127
RVNTLK V+ + EL K V+ VP ++ + L+ G + Q +S+
Sbjct: 207 RVNTLKASVEDVLEELRKLGLKVRVSPYVPTVIKYKGTVNYDQLHLLKEGKIIPQDDSSA 266
Query: 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187
+ A L PKPG +++D +APG KT+HLA L + + +IVA ++ +R+ RL + K +G
Sbjct: 267 LAAIILDPKPGERIIDLTAAPGGKTIHLAELSRVQAEIVALDVFHDRMLRLVEMAKRTGT 326
Query: 188 ANIEVLHGDFLNLDPKDPAYSE--VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
A +H ++ A+ E L+DPSCS +G +L H
Sbjct: 327 AA--AIHPVLMDARMAPNAFGEEVFDKALVDPSCSSTG--------VLGKHPDARWR--L 374
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+RL +L + Q++ L A+ PG R++Y+ CSI E E++IK VL
Sbjct: 375 NEKRLCQLVSQQEEILEAAIRLVKPG-GRILYTVCSILPEEGEEIIKKVL 423
>gi|448528893|ref|ZP_21620273.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum hochstenium
ATCC 700873]
gi|445710341|gb|ELZ62160.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum hochstenium
ATCC 700873]
Length = 321
Score = 90.9 bits (224), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 114/249 (45%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGC 106
++D+ A D P P VR N + V A E G + + D L LP G
Sbjct: 11 VDDVDAFRAACDRPLPSVVRTNEIAATPARVREAFDEAGVAY--EAVDWHDGLFRLPDGN 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
P V+G Q + S++ AL P+PG +V DAC+APG+KT +A M +G +V
Sbjct: 69 PGGNWPY-VHGWTHGQEEVSALPGLALDPRPGERVWDACAAPGSKTTQIADAMDDEGTVV 127
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + N R+ L+ + G N V + D N K A+ E L+D CS GT
Sbjct: 128 ANDNNLGRLSALRHNAERLGITNAVVTNQDARNFSLKPLAFDEFDRALVDAPCSCEGTCR 187
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVE 284
+ D L D ++ ++ ++ QK L A+ + PG VVYSTC+ E
Sbjct: 188 KNPDVL----------DEWTLDHVHAVAGIQKGVLARAVQATRPG-GVVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V+ VL
Sbjct: 237 NEAVLDHVL 245
>gi|449462383|ref|XP_004148920.1| PREDICTED: putative ribosomal RNA methyltransferase NOP2-like
[Cucumis sativus]
gi|449484971|ref|XP_004157033.1| PREDICTED: LOW QUALITY PROTEIN: putative ribosomal RNA
methyltransferase NOP2-like [Cucumis sativus]
Length = 611
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 80/269 (29%), Positives = 122/269 (45%), Gaps = 35/269 (13%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP----DLLILPP 104
+LM L + + P+P +R NTLK D+ ++ G V D L L++
Sbjct: 217 ELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRG----VNLDPLSKWSKVGLVVYDS 272
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
+ P + G LQG +S + ALAP+ +++D +APG KT ++AALMK G
Sbjct: 273 QVPIGATPEYMAGFYMLQGASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGM 332
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I A E+ +R++ L + G N V + D L PK + +LLD CSGSG
Sbjct: 333 IFANEIKAQRLKSLTANLHRMGVTNTVVCNYDGKEL-PKVLGMNTADRVLLDAPCSGSGV 391
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYSTCS 279
++ D + + S +E + K + QK+ + A+ VVYSTCS
Sbjct: 392 VSK--DESVKTSKS--------LEEIQKCAELQKQLILAAIDMVDSNSKSGGYVVYSTCS 441
Query: 280 IHQVENEDVIKSVL--------PIAMSFG 300
I ENE ++ L P + FG
Sbjct: 442 IMVDENEAIVDYALRKRDVKLVPCGLDFG 470
>gi|350633373|gb|EHA21738.1| hypothetical protein ASPNIDRAFT_210766 [Aspergillus niger ATCC
1015]
Length = 681
Score = 90.9 bits (224), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 77/247 (31%), Positives = 115/247 (46%), Gaps = 18/247 (7%)
Query: 54 MALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPPGC 106
A ++ + P+P +R NTL+ + S L + VV L P L +
Sbjct: 284 FAFFEANETPRPVVIRTNTLRTNRRSLAQALINRGVV----LEPVGKWSKVGLQVFESAV 339
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
L P + G +Q +S + ALAP+P +VLD SAPG KT +++ALM+ G ++
Sbjct: 340 PLGATPEYLAGHYIIQAASSFLPVMALAPQPNERVLDMASAPGGKTTYISALMRNTGCVI 399
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + +K R + L I G N V + D PK A +LLD C+G+G +
Sbjct: 400 ANDASKPRAKGLIGNIHRLGCKNTIVTNMDARTAFPK--AMGGFDRVLLDAPCTGTGVIS 457
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENE 286
+ + A P M+R L+A ++ HA G VVYSTCS+ ENE
Sbjct: 458 KDPGVKTSKNERDFLAIP-HMQRQLLLAAID--SVDHASKTGGY--VVYSTCSVTVEENE 512
Query: 287 DVIKSVL 293
V++ VL
Sbjct: 513 AVVQYVL 519
>gi|222479906|ref|YP_002566143.1| RNA methylase, NOL1/NOP2/sun family [Halorubrum lacusprofundi ATCC
49239]
gi|222452808|gb|ACM57073.1| RNA methylase, NOL1/NOP2/sun family [Halorubrum lacusprofundi ATCC
49239]
Length = 314
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/248 (31%), Positives = 110/248 (44%), Gaps = 17/248 (6%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGC 106
++D A D P P VRVN + V A E G + + D L LP G
Sbjct: 11 VDDAAAFRAACDRPLPSVVRVNEMAASPARVREAFDEEGVAY--EPVDWHDGLFRLPDGN 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
P V+G Q + S + AL P+PG V DAC+APG+KT +A M +G +V
Sbjct: 69 PGGNWPY-VHGWTHGQEEVSVLPGLALDPQPGEHVWDACAAPGSKTTQIADAMNDEGTVV 127
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + N R+ L+ + G N V + D N K A+ E L+D CS GT
Sbjct: 128 ANDNNLGRLSALRHNAERLGITNAIVTNQDARNFSTKPLAFDEFDRALVDAPCSCEGTCR 187
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVEN 285
+ LD D ++ ++ ++ QK L A+ + VVYSTC+ EN
Sbjct: 188 KNLD----------VVDQWTLDHVHAVAGIQKGILARAVQATRSGGTVVYSTCTFAPEEN 237
Query: 286 EDVIKSVL 293
E V+ VL
Sbjct: 238 EAVLDHVL 245
>gi|218290478|ref|ZP_03494598.1| sun protein [Alicyclobacillus acidocaldarius LAA1]
gi|218239499|gb|EED06694.1| sun protein [Alicyclobacillus acidocaldarius LAA1]
Length = 451
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/244 (29%), Positives = 119/244 (48%), Gaps = 20/244 (8%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQK-DDLVPDLLILPPGCDLHVH 111
++A + + P P +R N L+ + A+ LG + V + L D L + D+
Sbjct: 172 VLAALASMNEPAPMSLRANRLRGTREEAIARLGAEGAVARPAALAEDGLRVQGQIDVTRL 231
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
+G V +Q + + +VA L P+PG +V+D C+APG KT H+A LM +G+I A ++
Sbjct: 232 QAYRDGYVTIQDEGAMLVAPLLRPEPGMRVVDLCAAPGGKTTHVAELMGDRGEIDAYDVT 291
Query: 172 KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDH 231
+VR ++ + G ++ GD + P + Y A L+D C+G G
Sbjct: 292 VAKVRAIRQQAERLGLQSVRPRLGDGRQVQP-EALYD---AALVDAPCTGLGV------- 340
Query: 232 LLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDV 288
+ + P E + KL+ Q++ LR A + G VVYSTC++ + ENE V
Sbjct: 341 MRRRPDLRYRRRP---EDVAKLAQLQRELLRRACAIVRSGGC--VVYSTCTLLKEENESV 395
Query: 289 IKSV 292
++ V
Sbjct: 396 VREV 399
>gi|404494920|ref|YP_006719026.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter
metallireducens GS-15]
gi|418067574|ref|ZP_12704913.1| sun protein [Geobacter metallireducens RCH3]
gi|78192548|gb|ABB30315.1| 16S rRNA (5-methyl-C967)-methyltransferase [Geobacter
metallireducens GS-15]
gi|373558572|gb|EHP84908.1| sun protein [Geobacter metallireducens RCH3]
Length = 446
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 111/233 (47%), Gaps = 19/233 (8%)
Query: 65 PRYVRVNTLKMDVDSAVLELGKQFVVQKDDL-VPDLLILPPGCDLHVHPLIVNGCVFLQG 123
P +RVNTLK ++ + EL + + + P + + + P G +Q
Sbjct: 181 PLTIRVNTLKTTREAFMEELAAAGITAEPTVWAPHGVRILSRTAVTTLPGFAEGLFTVQD 240
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
++S + A L P+PG ++LD C+APG K +LA LM+ +G+++AC+++ +++R + +
Sbjct: 241 ESSQLAAFFLDPQPGERILDVCAAPGGKATYLAQLMENRGEVLACDISAKKLRLVAEAAA 300
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
G I + GD +P + ILLD CSG G P T D
Sbjct: 301 RLGIGIIRTMAGDATKPGAGEPPFDR---ILLDAPCSGFGVIRRN-----PEGKWWKTPD 352
Query: 244 PTEMERLNKLSAFQKK---ALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
L +L+A Q+ A+ L GV ++YSTCS E+EDV+ L
Sbjct: 353 D-----LARLAATQRNILAAVAPRLRPGGV--LLYSTCSTMVAEDEDVVDDFL 398
>gi|169771881|ref|XP_001820410.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Aspergillus oryzae RIB40]
gi|83768269|dbj|BAE58408.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391874756|gb|EIT83601.1| tRNA and rRNA cytosine-C5-methylase [Aspergillus oryzae 3.042]
Length = 751
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 116/258 (44%), Gaps = 36/258 (13%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ + S L + VV L P L +
Sbjct: 285 EAFAFFEANETPRPVVIRTNTLRTNRRSLAQALINRGVV----LEPVGKWSKVGLQVFES 340
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G LQ +S + ALAP+P +VLD SAPG KT +++ALM+ G
Sbjct: 341 AVPLGATPEYLAGHYILQAASSFLPVMALAPQPNERVLDMASAPGGKTTYISALMRNTGC 400
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG- 223
++A + +K R + L I G N V H D PK A +LLD C+G+G
Sbjct: 401 VIANDASKPRAKGLIGNIHRLGCKNTLVTHLDARTAFPK--AMGGFDRVLLDAPCTGTGV 458
Query: 224 --------TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
T+ D L H M+R L+A ++ H+ G +VY
Sbjct: 459 ISKDPAVKTSKTERDFLAIPH----------MQRQLLLAAID--SVDHSSKTGGY--IVY 504
Query: 276 STCSIHQVENEDVIKSVL 293
STCS+ ENE V++ VL
Sbjct: 505 STCSVTVEENEAVVQYVL 522
>gi|387818730|ref|YP_005679077.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum H04402 065]
gi|322806774|emb|CBZ04343.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum H04402 065]
Length = 442
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 122/235 (51%), Gaps = 28/235 (11%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVH 111
L L + P++ VRVN LK+D D A +LG+ + +++ + P+ + + G ++ +
Sbjct: 170 LKGLNERPNIT----VRVNNLKIDYDEAFEKLGEYGYNIEEGYICPEAIQIIKGKNIEKN 225
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
PL + G + +Q +++ +VA ++ VLD CSAPG KT H++ +M K K+ A +++
Sbjct: 226 PLFIEGNITVQDESAMLVAPSMELDEESIVLDLCSAPGGKTTHISEIMNNKSKVYAYDVH 285
Query: 172 KERVRRLKDTIKLSGAANIEVLHGD--FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ ++ ++ K G NIE GD N K+ A+ +L+D CSG G ++
Sbjct: 286 QNKLSLIESNAKRLGIKNIETDVGDAAVFNKKLKEKAHR----VLMDVPCSGLGIIRKKP 341
Query: 230 DHLLPSHASGHTADPTEMER-LNKLSAFQKKALRHALSF---PGVERVVYSTCSI 280
+ T+ ER + + A Q+K + + S+ G+ ++YSTC++
Sbjct: 342 E-----------IKWTKNEREIKNIIAIQRKIMNNGASYLEEGGI--LLYSTCTL 383
>gi|308456988|ref|XP_003090900.1| CRE-NOL-1 protein [Caenorhabditis remanei]
gi|308260037|gb|EFP03990.1| CRE-NOL-1 protein [Caenorhabditis remanei]
Length = 677
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDL 108
+L+ + D P+P +R N+LK+ D+ ++ G D L++ +
Sbjct: 228 ELLEFLEANDNPRPVTIRANSLKVKRRDLARNLINRGMNVDPAADWTKVGLVVYDSQVPV 287
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P + G +QG S + ALAP+PG +VLD CSAPG KT H+AALMK G + A
Sbjct: 288 GATPEYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNSGTLFAN 347
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLH---GDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+ + +R R + + G N V + +F + P + ILLD CSG+G
Sbjct: 348 DASFDRCRAIIGNLHRLGVNNAVVCNLGGEEFAKIRP-----NGFDRILLDAPCSGTGV- 401
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-----SFPGVERVVYSTCSI 280
+ + + D +++R + + Q++ + AL + P +VYSTCS+
Sbjct: 402 ------IWKDQSVKTSKDSQDVQRRHTV---QRQLILSALDSLDANSPNGGYLVYSTCSV 452
Query: 281 HQVENEDVIKSVL--------PIAMSFGFQLATPF 307
ENE V+ +L P +S G T F
Sbjct: 453 LVEENEAVVNFLLERRHCELVPTGLSIGVDGYTRF 487
>gi|443926035|gb|ELU44783.1| nucleolar RNA m(5)C methyltransferase [Rhizoctonia solani AG-1 IA]
Length = 915
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 109/253 (43%), Gaps = 23/253 (9%)
Query: 49 SIEDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVPDLLILPPG 105
S+ + + ++ +VP+P +R NTL+ D+ A++ G L +
Sbjct: 535 SVSEAIEFFEANEVPRPVTIRTNTLRARRRDLAQALINRGVNLEPIGKWTNVGLQVFESS 594
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+ P + G LQ +S + ALAP+P +VLD SAPG KT H+AALM+ G I
Sbjct: 595 VPIGATPEYLAGHYMLQAASSFLPVIALAPQPNERVLDMASAPGGKTTHMAALMQNTGLI 654
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
A + NK R + L + G N+ V D PK +LLD CSG+G
Sbjct: 655 FANDANKARTKSLSANVHRLGCKNVVVCSYDGREF-PK--VLGGFDRVLLDAPCSGTGV- 710
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-----SFPGVERVVYSTCSI 280
S + T LS QK+ + A+ S +VYSTCS+
Sbjct: 711 -----------ISKDASVKTNKRDFTLLSHLQKQLILCAIDSVDASSKTGGYIVYSTCSV 759
Query: 281 HQVENEDVIKSVL 293
ENE V+ L
Sbjct: 760 TVDENESVVDYAL 772
>gi|418325013|ref|ZP_12936223.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU071]
gi|365228919|gb|EHM70091.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis VCU071]
Length = 435
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 88/302 (29%), Positives = 143/302 (47%), Gaps = 40/302 (13%)
Query: 33 AIQLALAQLLVRNKVK--SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FV 89
AIQ +L + +V + V +E + ++ P VR N + +DS + +L ++ +
Sbjct: 142 AIQYSLPKWIVDHWVTHFGVEKTENIARSFLEPVATTVRANISRDSIDSIISKLEQEGYH 201
Query: 90 VQKDDLVPDLLILPPGCDLHVHPL-IVN------GCVFLQGKASSMVAAALAPKPGWKVL 142
V+KDD++P C LH+ + +VN G + +Q K+S MVA + KVL
Sbjct: 202 VKKDDMLP-------FC-LHISGMPVVNSNAFKEGYISIQDKSSMMVAYVMNLGRDDKVL 253
Query: 143 DACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202
DACSAPG K H+A ++ +G + A ++++ ++ +K I NI+ D +
Sbjct: 254 DACSAPGGKACHMAEILSPEGHVDATDIHEHKINLIKQNITKLKLNNIKAFQHDATEV-- 311
Query: 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262
D Y + IL+D CSG G + P + + + L Q + L
Sbjct: 312 YDKMYDK---ILVDAPCSGLGVLRHK-----PEIKYSQSQNS-----IKSLVELQLQILE 358
Query: 263 HALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPN-GTAEASQFLK 319
+ PG +VYSTC+I Q+ENE+VI + L F F+ PF N T E + L+
Sbjct: 359 NVKDNIKPG-GTIVYSTCTIEQMENENVIYTFLKRHKDFEFE---PFQNPATGEQVKTLQ 414
Query: 320 AL 321
L
Sbjct: 415 IL 416
>gi|27367523|ref|NP_763050.1| tRNA and rRNA cytosine-C5-methylase [Vibrio vulnificus CMCP6]
gi|27359095|gb|AAO08040.1|AE016812_22 tRNA and rRNA cytosine-C5-methylase [Vibrio vulnificus CMCP6]
Length = 404
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 113/238 (47%), Gaps = 24/238 (10%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P RY+RVN LK D D L K+ V D V L + L +G
Sbjct: 150 PAKRYLRVNLLKCDRDDLAKRLNKEGVSTVPVDGVESALEVTSNSALFKTQSFADGWFEQ 209
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q S VAAAL KPG +V+DAC+ G KT+HLAA+M GKG+++A ++ + ++ LK+
Sbjct: 210 QDAGSQKVAAALEVKPGMRVIDACAGAGGKTLHLAAMMAGKGRLLAMDVEEWKLNNLKER 269
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRA--ILLDPSCSGSGTAAERLDHLLPSHASG 239
+ +GA N+E L K ++ A +LLD CSG G +L +
Sbjct: 270 ARRAGAHNVETR----LITSSKTIKRLKLSADRVLLDVPCSGLG--------VLKRNPDA 317
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVERV----VYSTCSIHQVENEDVIKSVL 293
D TE ERL L Q L S+ + +V VY+TCSI EN + + L
Sbjct: 318 KWRD-TE-ERLPVLMELQAHIL---ASYSRMVKVGGMLVYATCSIMPCENRGQVDAFL 370
>gi|409993041|ref|ZP_11276199.1| 16S rRNA methyltransferase B [Arthrospira platensis str. Paraca]
gi|291566504|dbj|BAI88776.1| ribosomal RNA small subunit methyltransferase B [Arthrospira
platensis NIES-39]
gi|409936102|gb|EKN77608.1| 16S rRNA methyltransferase B [Arthrospira platensis str. Paraca]
Length = 447
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/179 (32%), Positives = 94/179 (52%), Gaps = 14/179 (7%)
Query: 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERV 175
G +Q ++ +V + P+PG ++DAC+APG KT H+A LM GK++A + + R+
Sbjct: 238 QGWWTVQDASAQLVGYIVDPQPGEIIIDACAAPGGKTTHIAELMGDNGKVIAIDRSPGRL 297
Query: 176 RRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLP 234
+ LK I +I+V GD + P Y+ + +LLD CSG GT R D
Sbjct: 298 KPLKQNINRLKLRSIQVEVGDSRHF----PQYNNMADRVLLDAPCSGGGTLHRRSD---- 349
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
S P ++ +L++L A + + H + GV +VY+TC+++ ENE I S L
Sbjct: 350 ---SRWRQTPDQIRQLSQLQAELLEMVSHWVKPGGV--LVYATCTLYPQENEWAIASFL 403
>gi|296131699|ref|YP_003638946.1| RNA methylase [Thermincola potens JR]
gi|296030277|gb|ADG81045.1| RNA methylase, NOL1/NOP2/sun family [Thermincola potens JR]
Length = 460
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/244 (31%), Positives = 109/244 (44%), Gaps = 37/244 (15%)
Query: 68 VRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV----------HPLIVNG 117
+RVN LK+ DS V VP L P C L HP G
Sbjct: 36 IRVNPLKISRDSLV------------SRVPFSLRPVPWCRLGFYYSPDDRPGKHPYHAAG 83
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
++Q ++ V L P+PG ++LD C+APG K+ H+ + + G +VA E+N RV+
Sbjct: 84 LYYIQEPSAMAVVEILQPQPGERILDLCAAPGGKSTHIYSYLGHTGLLVANEINANRVKA 143
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
L + ++ GA NI V + L + PAY + IL+D CSG G +L +
Sbjct: 144 LAENLERWGARNILVTNETPEKLAERMPAYFD--KILVDAPCSGEGM-FRKLPEACLDWS 200
Query: 238 SGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPI 295
G + + +A QK L A S PG +VYSTC+ ENE+ + S L
Sbjct: 201 EGKS---------QRCAAMQKNLLAQAASMLKPG-GVLVYSTCTFSPEENEEQVNSFLQA 250
Query: 296 AMSF 299
F
Sbjct: 251 HNDF 254
>gi|148380461|ref|YP_001255002.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum A str. ATCC 3502]
gi|153931256|ref|YP_001384684.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum A str. ATCC 19397]
gi|153936344|ref|YP_001388205.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum A str. Hall]
gi|168180610|ref|ZP_02615274.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum NCTC 2916]
gi|170756128|ref|YP_001782050.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum B1 str. Okra]
gi|148289945|emb|CAL84058.1| putative ribosomal RNA methyltransferase [Clostridium botulinum A
str. ATCC 3502]
gi|152927300|gb|ABS32800.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum A str. ATCC 19397]
gi|152932258|gb|ABS37757.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum A str. Hall]
gi|169121340|gb|ACA45176.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum B1 str. Okra]
gi|182668623|gb|EDT80602.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum NCTC 2916]
Length = 442
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 122/235 (51%), Gaps = 28/235 (11%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVH 111
L L + P++ VRVN LK+D D A +LG+ + +++ + P+ + + G ++ +
Sbjct: 170 LKGLNERPNIT----VRVNNLKIDYDEAFEKLGEYGYNIEEGYICPEAIQIIKGKNIEKN 225
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
PL + G + +Q +++ +VA ++ VLD CSAPG KT H++ +M K K+ A +++
Sbjct: 226 PLFIEGNITVQDESAMLVAPSMELDEESIVLDLCSAPGGKTTHISEIMNNKSKVYAYDVH 285
Query: 172 KERVRRLKDTIKLSGAANIEVLHGD--FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ ++ ++ K G NIE GD N K+ A+ +L+D CSG G ++
Sbjct: 286 QNKLSLIESNAKRLGIKNIETDVGDAAVFNKKLKEKAHR----VLMDVPCSGLGIIRKKP 341
Query: 230 DHLLPSHASGHTADPTEMER-LNKLSAFQKKALRHALSF---PGVERVVYSTCSI 280
+ T+ ER + + A Q+K + + S+ G+ ++YSTC++
Sbjct: 342 E-----------IKWTKNEREIKNIIAIQRKIMNNGASYLKEGGI--LLYSTCTL 383
>gi|167540287|ref|XP_001741734.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165893617|gb|EDR21802.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 505
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 121/265 (45%), Gaps = 48/265 (18%)
Query: 61 DVPKPRYVRVNTLK------------MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDL 108
+ P+P +RVNTLK V+ ++E K +V D VP +
Sbjct: 219 EAPRPVTIRVNTLKSRRRELAQKLINRGVNVDMIEWSKSGLVVYDSQVP----------I 268
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P + G LQ +S + ALAP+P K+LD C+APG KT H+AALMK G +VA
Sbjct: 269 GATPEYLAGQYILQSSSSWVSVIALAPQPNEKILDMCAAPGGKTTHIAALMKDTGILVAN 328
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228
+++K+R++ + + G N + + D PK + +L+D C+G G
Sbjct: 329 DISKDRLKAVIGNVHRLGITNTIITNYDGHEF-PK--VMGQFDRVLVDAPCTGLG----- 380
Query: 229 LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYSTCSIHQV 283
+ S + +E + + + QK+ + HA+ + VVYSTCSI
Sbjct: 381 ----IISRDAAVKLSKSEQD-IKDCTRIQKELILHAIDSVNPKSKTGGYVVYSTCSITVE 435
Query: 284 ENEDVIK--------SVLPIAMSFG 300
ENE VI V+PIA+ G
Sbjct: 436 ENEAVIDYALKKRNVKVVPIALQDG 460
>gi|126663950|ref|ZP_01734944.1| putative sun protein [Flavobacteria bacterium BAL38]
gi|126623899|gb|EAZ94593.1| putative sun protein [Flavobacteria bacterium BAL38]
Length = 405
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/248 (30%), Positives = 120/248 (48%), Gaps = 36/248 (14%)
Query: 68 VRVNTLK----------MDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNG 117
+RVN LK MD+D V E K++ PD LIL ++ + +G
Sbjct: 154 LRVNRLKTTKEKLRAILMDLD-IVTEFNKEY--------PDALILTERANVFLTDAFKDG 204
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
+Q +S +VA L +PG +V+D C+ G KT+HLA+LM+ KG+++A +L + ++++
Sbjct: 205 LFEVQDASSQLVAYFLDVQPGMRVVDTCAGAGGKTLHLASLMENKGQLIAMDLYESKLKQ 264
Query: 178 LKDTIKLSGAANIE--VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPS 235
LK K +GA NIE V+ + + + +L+D CSG G D
Sbjct: 265 LKIRAKRNGAFNIEPRVIE----STKTIKKLHEKADRVLIDAPCSGLGVLKRNPD----- 315
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLP- 294
S P +E + K+ A + + PG ++VY+TCS+ EN++ IK L
Sbjct: 316 --SKWKLQPEFIENIKKIQAEVLENYSKIVK-PG-GKLVYATCSVLPSENQEQIKHFLST 371
Query: 295 -IAMSFGF 301
I F F
Sbjct: 372 EIGKEFTF 379
>gi|153938943|ref|YP_001391803.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum F str. Langeland]
gi|152934839|gb|ABS40337.1| ribosomal RNA small subunit methyltransferase B [Clostridium
botulinum F str. Langeland]
Length = 442
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 122/235 (51%), Gaps = 28/235 (11%)
Query: 53 LMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVH 111
L L + P++ VRVN LK+D D A +LG+ + +++ + P+ + + G ++ +
Sbjct: 170 LKGLNERPNIT----VRVNNLKIDYDEAFEKLGEYGYNIEEGYICPEAIQIIKGKNIEKN 225
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
PL + G + +Q +++ +VA ++ VLD CSAPG KT H++ +M K K+ A +++
Sbjct: 226 PLFIEGNITVQDESAMLVAPSMELDEESIVLDLCSAPGGKTTHISEIMNNKSKVYAYDVH 285
Query: 172 KERVRRLKDTIKLSGAANIEVLHGD--FLNLDPKDPAYSEVRAILLDPSCSGSGTAAERL 229
+ ++ ++ K G NIE GD N K+ A+ +L+D CSG G ++
Sbjct: 286 QNKLSLIESNAKRLGIKNIETDVGDAAVFNKKLKEKAHR----VLMDVPCSGLGIIRKKP 341
Query: 230 DHLLPSHASGHTADPTEMER-LNKLSAFQKKALRHALSF---PGVERVVYSTCSI 280
+ T+ ER + + A Q+K + + S+ G+ ++YSTC++
Sbjct: 342 E-----------IKWTKNEREIKNIIAIQRKIMNNGASYLKEGGI--LLYSTCTL 383
>gi|433591369|ref|YP_007280865.1| NOL1/NOP2/sun family putative RNA methylase [Natrinema pellirubrum
DSM 15624]
gi|448332956|ref|ZP_21522175.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema pellirubrum
DSM 15624]
gi|433306149|gb|AGB31961.1| NOL1/NOP2/sun family putative RNA methylase [Natrinema pellirubrum
DSM 15624]
gi|445624492|gb|ELY77873.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema pellirubrum
DSM 15624]
Length = 302
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/252 (29%), Positives = 116/252 (46%), Gaps = 22/252 (8%)
Query: 47 VKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLIL--- 102
+ ED +A + P VRVNT+K VD A+ L + ++ D P +L L
Sbjct: 11 IDDFEDFLAACRRP---LGNAVRVNTIKASVDRALATLEAEGLAYEQADWNPRVLDLETD 67
Query: 103 PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK 162
PG +G Q + S++ L P+PG +V D C+APG K +AALM +
Sbjct: 68 SPGSTWASFHGFTHG----QEEVSAVPPVVLDPEPGERVWDCCAAPGGKATQIAALMDDR 123
Query: 163 GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222
G +VA + N R+ L+ + GA ++ V + D N + E L+D CS
Sbjct: 124 GTVVANDNNLGRISALRFNAERLGATSLAVTNADARNYSLSRFDFDEFDRTLVDAPCSCE 183
Query: 223 GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIH 281
GT + D L + + GH ++ ++ QK +R A+ + VVYSTC+
Sbjct: 184 GTIRKNPD-ALDNWSEGH---------ISSVAGIQKGIIRRAIQATREGGTVVYSTCTFA 233
Query: 282 QVENEDVIKSVL 293
ENE V++ +
Sbjct: 234 PEENEAVVQHAM 245
>gi|420185478|ref|ZP_14691570.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM040]
gi|394254464|gb|EJD99433.1| ribosomal RNA small subunit methyltransferase B [Staphylococcus
epidermidis NIHLM040]
Length = 435
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/270 (30%), Positives = 128/270 (47%), Gaps = 38/270 (14%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPL-IVN---- 116
P VR N + +DS + +L ++ + V+KDD++P C LH+ + +VN
Sbjct: 174 PVATTVRANISRDSIDSIISKLEQEGYHVKKDDMLP-------FC-LHISGMPVVNSNAF 225
Query: 117 --GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
G + +Q K+S MVA + KVLDACSAPG K H+A ++ +G + A ++++ +
Sbjct: 226 KEGYISIQDKSSMMVAYVMNLGRDDKVLDACSAPGGKACHMAEILSPEGHVDATDIHEHK 285
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
+ +K I NI+ D + D Y + IL+D CSG G + P
Sbjct: 286 INLIKQNITKLKLNNIKAFQHDATEV--YDKMYDK---ILVDAPCSGLGVLRHK-----P 335
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSV 292
+ + + L Q + L + PG +VYSTC+I Q+ENE+VI +
Sbjct: 336 EIKYSQSQNS-----IKSLVELQLQILENVKDNIKPG-GTIVYSTCTIEQMENENVIYTF 389
Query: 293 LPIAMSFGFQLATPFPN-GTAEASQFLKAL 321
L F F+ PF N T E + L+ L
Sbjct: 390 LKRHKDFEFE---PFQNPATGEQVKMLQIL 416
>gi|429193501|ref|YP_007179179.1| NOL1/NOP2/sun family RNA methylase [Natronobacterium gregoryi SP2]
gi|448323950|ref|ZP_21513393.1| RNA methylase, NOL1/NOP2/sun family protein [Natronobacterium
gregoryi SP2]
gi|429137719|gb|AFZ74730.1| NOL1/NOP2/sun family putative RNA methylase [Natronobacterium
gregoryi SP2]
gi|445619952|gb|ELY73463.1| RNA methylase, NOL1/NOP2/sun family protein [Natronobacterium
gregoryi SP2]
Length = 302
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/249 (31%), Positives = 112/249 (44%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
++D A P VRVNT+K V+ A L V + D P +L L PG
Sbjct: 11 VDDFEAFLAACRRPLGNAVRVNTIKASVERATAALEADGVAYDQADWNPQVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V DAC+APG K L+ALM +G +
Sbjct: 71 STWASFHGFTHG----QEEVSAVPPVVLDPEPGERVWDACAAPGGKATQLSALMDDEGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA N+ V + D N + L+D CS GT
Sbjct: 127 VANDSNLGRISALRFNAERLGATNLAVTNADARNYSLNAFEFDAFDRALVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVE 284
+ D L D +E + + +S QK LR A+ + VVYSTC+ E
Sbjct: 187 RKNPDAL---------EDWSE-DHIASVSGIQKGILRRAVQATREGGTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V++ VL
Sbjct: 237 NEAVVQHVL 245
>gi|297526431|ref|YP_003668455.1| Fmu (Sun) domain-containing protein [Staphylothermus hellenicus DSM
12710]
gi|297255347|gb|ADI31556.1| Fmu (Sun) domain protein [Staphylothermus hellenicus DSM 12710]
Length = 449
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 118/242 (48%), Gaps = 17/242 (7%)
Query: 56 LYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV--VQKDDLVPDLLILPPGCDLHVHPL 113
L++ D P VRVNTLK V+ VLE+ ++ V V++ +V ++ P + L
Sbjct: 175 LFKALDKQLPLSVRVNTLKTGVEE-VLEILRREVKWVRRSSIVSTIIKFPGPYNFDKSDL 233
Query: 114 IVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKE 173
G + +Q +A+++ + L PKPG V+D +APG KT H+A LM +G I A +++K+
Sbjct: 234 FRKGYIVIQEEAAAVASLILDPKPGMTVVDMAAAPGGKTQHIAELMGNEGVIYAFDVDKK 293
Query: 174 RVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLL 233
R+ R++ ++ +G ++ D P+ +LLD CS GT + D
Sbjct: 294 RIDRMQGILRRTGVRIAKIYREDSRKA-PEILGEKIADRVLLDAPCSSDGTIMKNPDLRW 352
Query: 234 PSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKS 291
E++ +L Q + L PG +++Y TCS+ ENE +I+
Sbjct: 353 RLRE----------EKIAELQKLQYEMLEAGWKLLKPG-GKLLYCTCSMLLEENEHIIEK 401
Query: 292 VL 293
L
Sbjct: 402 FL 403
>gi|398394152|ref|XP_003850535.1| hypothetical protein MYCGRDRAFT_74360, partial [Zymoseptoria
tritici IPO323]
gi|339470413|gb|EGP85511.1| hypothetical protein MYCGRDRAFT_74360 [Zymoseptoria tritici IPO323]
Length = 658
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 93/303 (30%), Positives = 134/303 (44%), Gaps = 43/303 (14%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFV-VQKDDLVPDLLILPPGC 106
++ +A + + P+P +R NTL+ D+ A++ G V K V L I
Sbjct: 280 QEALAFFDANETPRPMVIRTNTLRTHRRDLAHALINRGVTLEPVGKWSKV-GLQIFESQV 338
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
L P + G LQ +S + ALAP+ +VLD +APG KT HLAALM+ G I
Sbjct: 339 PLGATPEYLAGHYILQAASSFLPVMALAPQEHERVLDMAAAPGGKTTHLAALMRNTGCIF 398
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
+ + NK+R + L I G N V + L PK +LLD CSG+G A
Sbjct: 399 SNDSNKDRAKGLIGNIHRLGVKNTVVCNYSALEF-PK--VMGGFDRVLLDAPCSGTGVIA 455
Query: 227 ERLDHLLPSHASGHT-ADPTEMERLNK---LSAFQKKALRHALSFPGVERVVYSTCSIHQ 282
+ PS + T AD + L K L+A ++ HA G +VYSTCS+
Sbjct: 456 KD-----PSVKTNKTEADFLRLPHLQKQLLLAAVD--SVDHASKTGGY--IVYSTCSVTV 506
Query: 283 VENEDVIKSVL---------PIAMSFGFQLATPFPNGTAEASQFLKALSIYFEPIQWKTK 333
ENE V++ VL P + FG + F K S F P +T+
Sbjct: 507 EENEQVVQYVLNKRPNVKLVPTGLIFGKE-------------GFTKYQSKRFHPSMKETR 553
Query: 334 KAF 336
+ +
Sbjct: 554 RYY 556
>gi|289580347|ref|YP_003478813.1| RNA methylase [Natrialba magadii ATCC 43099]
gi|448284017|ref|ZP_21475282.1| RNA methylase [Natrialba magadii ATCC 43099]
gi|289529900|gb|ADD04251.1| RNA methylase, NOL1/NOP2/sun family [Natrialba magadii ATCC 43099]
gi|445572112|gb|ELY26654.1| RNA methylase [Natrialba magadii ATCC 43099]
Length = 302
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
I+D A + P VRVNT+K + A L + V ++ + P +L L PG
Sbjct: 11 IDDFEAFLAACERPLGNAVRVNTIKASPERATAALEEDDVAYEQAEWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K +AALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPVVLDPQPGERVWDCCAAPGGKATQIAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N K + E L+D CS GT
Sbjct: 127 VANDNNLGRISALRFNAERLGATSLAVTNDDARNYSMKRFPFDEFDRTLVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVE 284
+ D L + + GH ++ ++ QK LR A+ + VVYSTC+ E
Sbjct: 187 RKNPD-ALDNWSEGH---------IDTIAGIQKGILRRAIQTTREGGTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V++ +
Sbjct: 237 NEAVVQHAI 245
>gi|403381204|ref|ZP_10923261.1| nol1/nop2/sun family RNA methylase [Paenibacillus sp. JC66]
Length = 535
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 110/249 (44%), Gaps = 22/249 (8%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLH 109
ED A + P+ +R+N LK+ + K F ++ P
Sbjct: 19 EDADAFLHSYKEPRTFGLRLNPLKLSASDENFDYIKTLFGLEPVPWCPTGYYYEEASRPG 78
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
HP G ++Q ++ LAP+PG VLD +APG K +A M+G+G ++A E
Sbjct: 79 KHPFHQAGLYYIQEPSAMSAVELLAPRPGETVLDLAAAPGGKASQIAGKMQGQGLLIANE 138
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG---TAA 226
++ R R L + + G AN V L + PA+ E ILLD CSG G A
Sbjct: 139 IHPGRARILSENFERMGVANAVVTQAAPDELAARFPAFFE--RILLDAPCSGEGMFRKDA 196
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVE 284
E + P H ++ + Q +RHA++ PG +VYSTC+ + E
Sbjct: 197 EAIGEWSPQH-------------VDYCAVRQLDVIRHAVTMLKPGGV-LVYSTCTFSEEE 242
Query: 285 NEDVIKSVL 293
NE VI+ +L
Sbjct: 243 NEGVIEQLL 251
>gi|422304597|ref|ZP_16391940.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9806]
gi|389790263|emb|CCI13866.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9806]
Length = 446
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/305 (29%), Positives = 146/305 (47%), Gaps = 41/305 (13%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQL-LVRNKVKSIEDLMALY-QTPDVPKPRYVRVNTLKMD 76
P A + +LH + L QL L R V E L + ++PD+ +R+N LK
Sbjct: 139 PENTASRLGILH--SFPDWLVQLWLDRFSVTETEQLCQWFNRSPDLD----IRINPLKTS 192
Query: 77 VDSAVLELGKQFVVQKDDLVPDLLILPPGCDL-----HVHPL--IVNGCVFLQGKASSMV 129
++ EL + ++ + L LP C L ++ L G LQ ++ +V
Sbjct: 193 REALENEL------ESANITFNHLKLPLACRLTSGLGNIERLEGFRAGNYTLQDISAQLV 246
Query: 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189
L P+PG ++DAC+APG KT H+A LM +G+I+AC+ R+R+L+ IK
Sbjct: 247 TYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLRQLEANIKRLDLKA 306
Query: 190 IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMER 249
IE+ GD + + + +L+D CSG GT +R P T E
Sbjct: 307 IEIHLGDSRD---RPQWHGIADRVLIDAPCSGLGTLHKR-----PDIRWRQTP-----EN 353
Query: 250 LNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATP 306
L L+ Q + L A ++ G+ +VY+TC+++ +ENE VI+ L A +++ATP
Sbjct: 354 LPVLAKRQGELLASAATWVKPKGI--LVYATCTLNPLENERVIEQFL--AAHPDWKMATP 409
Query: 307 FPNGT 311
N +
Sbjct: 410 DSNSS 414
>gi|448424074|ref|ZP_21582200.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum terrestre
JCM 10247]
gi|445682739|gb|ELZ35152.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum terrestre
JCM 10247]
Length = 309
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGC 106
++D+ A D P P VR N + V A E G + + D L LP G
Sbjct: 11 VDDVDAFRAACDRPLPSVVRTNEIAATPARVREAFDEAGVAY--EPVDWHDGLFRLPDGN 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
P V+G Q + S + AL P+PG +V DAC+APG+KT +A M +G +V
Sbjct: 69 PGGNWPY-VHGWTHGQEEVSVLPTLALDPRPGERVWDACAAPGSKTTQIADAMDDEGTVV 127
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + N R+ L+ + G N V + D N K A+ E L+D CS GT
Sbjct: 128 ANDNNLGRLSALRHNAERLGITNAIVTNQDARNFSTKPLAFDEFDRALVDAPCSCEGTCR 187
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVE 284
+ D L D ++ ++ ++ QK L A+ + PG VVYSTC+ E
Sbjct: 188 KNPDVL----------DQWTLDHVHAVAGIQKGVLARAVQATRPG-GVVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V+ VL
Sbjct: 237 NEAVLDHVL 245
>gi|448400491|ref|ZP_21571411.1| RNA methylase, NOL1/NOP2/sun family protein [Haloterrigena limicola
JCM 13563]
gi|445667211|gb|ELZ19856.1| RNA methylase, NOL1/NOP2/sun family protein [Haloterrigena limicola
JCM 13563]
Length = 303
Score = 90.5 bits (223), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/249 (29%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLIL---PPG 105
I+D P VR+NT+K V+ + L ++ V ++ D P +L L PG
Sbjct: 11 IDDFDVFLAACRRPLGNAVRINTIKASVERTLAALDEEGVGYEQADWNPRVLTLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ A L P+PG +V D+C+APG K LAALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPAVVLDPQPGERVWDSCAAPGGKATQLAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N + L+D CS GT
Sbjct: 127 VANDNNLGRISALRFNAERLGATSLAVTNADARNYSLNRFDFDAFDRTLVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVE 284
+ D L + + GH ++ ++ QK +R A+ + VVYSTC+ E
Sbjct: 187 RKNPD-ALDNWSEGH---------ISSVAGIQKGIIRRAIQATREGGTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V++ L
Sbjct: 237 NEAVVQHAL 245
>gi|448478964|ref|ZP_21603970.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum arcis JCM
13916]
gi|445822794|gb|EMA72556.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum arcis JCM
13916]
Length = 309
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGC 106
++D+ A D P P VR N + V A E G + + D L LP G
Sbjct: 11 VDDVDAFRAACDRPLPSVVRTNEIAATPGRVREAFDEAGVAY--EPVDWHDGLFRLPDGN 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
P V+G Q + S + AL P+PG +V DAC+APG+KT +A M +G +V
Sbjct: 69 PGGNWPY-VHGWTHGQEEVSVLPTLALDPRPGERVWDACAAPGSKTTQIADAMDDEGTVV 127
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + N R+ L+ + G N V + D N K A+ E L+D CS GT
Sbjct: 128 ANDNNLGRLSALRHNAERLGITNAIVTNQDARNFSTKPLAFDEFDRALVDAPCSCEGTCR 187
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVE 284
+ D L D ++ ++ ++ QK L A+ + PG VVYSTC+ E
Sbjct: 188 KNPDVL----------DQWTLDHVHAVAGIQKGVLARAVQATRPG-GVVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V+ VL
Sbjct: 237 NEAVLDHVL 245
>gi|145299018|ref|YP_001141859.1| rRNA (cytosine-C(5)-)-methyltransferase RsmF [Aeromonas salmonicida
subsp. salmonicida A449]
gi|418357620|ref|ZP_12960312.1| rRNA (cytosine-C(5)-)-methyltransferase RsmF [Aeromonas salmonicida
subsp. salmonicida 01-B526]
gi|167012765|sp|A4SMI9.1|RSMF_AERS4 RecName: Full=Ribosomal RNA small subunit methyltransferase F;
AltName: Full=16S rRNA m5C1407 methyltransferase;
AltName: Full=rRNA (cytosine-C(5)-)-methyltransferase
RsmF
gi|142851790|gb|ABO90111.1| Sun/nucleolar protein family protein [Aeromonas salmonicida subsp.
salmonicida A449]
gi|356689209|gb|EHI53755.1| rRNA (cytosine-C(5)-)-methyltransferase RsmF [Aeromonas salmonicida
subsp. salmonicida 01-B526]
Length = 476
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 91/274 (33%), Positives = 129/274 (47%), Gaps = 55/274 (20%)
Query: 63 PKPRYVRVNTLKMDVDSAVLE---LGKQF-----------VVQKDDLVPDLLILPPGCDL 108
P R +RVNTLK+ V V++ LG QF + + D+ VP L
Sbjct: 35 PLRRSIRVNTLKISVSDFVMQMQPLGWQFDAVPWCETGFWLTRADESVP----------L 84
Query: 109 HVHPLIVNGCVFLQGKASSM--VAAALAP---KPGWKVLDACSAPGNKTVHLAALMKGKG 163
++G ++Q +ASSM V A A K +LDA +APG+KT +AALM +G
Sbjct: 85 GNTAEHLSGLFYIQ-EASSMLPVTALFASDQVKRDGMLLDAAAAPGSKTTQIAALMNNQG 143
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+VA E + R++ L I+ G N+ + H D P AILLD CSG G
Sbjct: 144 MLVANEYSSSRLKVLSANIQRCGVTNVGMTHFDAKVFGQWLP--ETFDAILLDAPCSGEG 201
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR---HALSFPGVERVVYSTCSI 280
T + D L +E +++++A Q+ L HAL GV +VYSTC++
Sbjct: 202 TVRKDEDAL----------RNWSIESIDEIAAVQQGLLESAFHALKPGGV--LVYSTCTL 249
Query: 281 HQVENEDVIKSVLPIAMSFG-----FQLATPFPN 309
Q EN+ V +S+L FG LA FPN
Sbjct: 250 SQQENQAVCQSLLE---KFGDALTLDSLADLFPN 280
>gi|156936862|ref|YP_001434658.1| ribosomal RNA methyltransferase NOP2 [Ignicoccus hospitalis KIN4/I]
gi|156565846|gb|ABU81251.1| ribosomal RNA methyltransferase NOP2 [Ignicoccus hospitalis KIN4/I]
Length = 326
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 77/254 (30%), Positives = 117/254 (46%), Gaps = 15/254 (5%)
Query: 42 LVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLL 100
+VR + + D + L + +VP +R N LK+ L + FV+++ P
Sbjct: 32 MVRRYREMLGDPLPLLEAFEVPPKPTIRCNFLKVGCGKLKERLESRGFVLKQVLWCPHAY 91
Query: 101 -ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALM 159
+L L P ++G ++Q KAS++ L PKPG V D SAPG K HLA LM
Sbjct: 92 EVLREPFSLSSTPEHLDGWFYIQDKASTLPPLVLGPKPGETVADLASAPGGKATHLAQLM 151
Query: 160 KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219
G+++ E ++R + L ++ N V+ D N Y LLD C
Sbjct: 152 GNSGRLILIERRRDRAKALMSNLERMEILNANVIIDDAYNAS----KYGPFDKALLDAPC 207
Query: 220 SGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCS 279
+G G A PS + P ++ ++K+ A +L PG E +VYSTCS
Sbjct: 208 TGEGVIARD-----PSRK--RSRRPEDLALMHKVQAMLLNRALDSLK-PGGE-LVYSTCS 258
Query: 280 IHQVENEDVIKSVL 293
I ENE VI+++L
Sbjct: 259 IAPEENELVIETIL 272
>gi|428315935|ref|YP_007113817.1| sun protein [Oscillatoria nigro-viridis PCC 7112]
gi|428239615|gb|AFZ05401.1| sun protein [Oscillatoria nigro-viridis PCC 7112]
Length = 446
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 97/191 (50%), Gaps = 30/191 (15%)
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
P G +Q ++ +V LAP+PG ++DAC+APG KT H A LM+ G I AC+
Sbjct: 232 PGYSEGWWTIQDSSAQLVTHLLAPQPGETIIDACAAPGGKTTHSAELMQDTGTIYACDKT 291
Query: 172 KERVRRLKDTIKLSGAANIEVLHGD------FLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
R+++LK+ +I++ GD F+NL + +LLD CSG GT
Sbjct: 292 ASRLKKLKENADRLQMKSIKIHTGDSRHFPEFVNLADR---------VLLDAPCSGLGTL 342
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQ 282
R D HT E + + S Q + L +A +F GV +VY+TC+IH
Sbjct: 343 HRRADARW-----RHTP-----ENIQQQSQLQSELLANAATFVKSGGV--LVYATCTIHP 390
Query: 283 VENEDVIKSVL 293
+ENE VI+S L
Sbjct: 391 LENETVIRSFL 401
>gi|448448406|ref|ZP_21591219.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum litoreum
JCM 13561]
gi|445814822|gb|EMA64780.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum litoreum
JCM 13561]
Length = 309
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGC 106
++D+ A D P P VR N + V A E G + + D L LP G
Sbjct: 11 VDDVDAFRAACDRPLPSVVRTNEIAATPARVREAFDEAGVAY--EPVDWHDGLFRLPDGN 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
P V+G Q + S + AL P+PG +V DAC+APG+KT +A M +G +V
Sbjct: 69 PGGNWPY-VHGWTHGQEEVSVLPTLALDPRPGERVWDACAAPGSKTTQIADAMDDEGTVV 127
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + N R+ L+ + G N V + D N K A+ E L+D CS GT
Sbjct: 128 ANDNNLGRLSALRHNAERLGITNAIVTNQDARNFSTKPLAFDEFDRALVDAPCSCEGTCR 187
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVE 284
+ D L D ++ ++ ++ QK L A+ + PG VVYSTC+ E
Sbjct: 188 KNPDVL----------DQWTLDHVHAVAGIQKGVLARAVQATRPG-GVVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V+ VL
Sbjct: 237 NEAVLDHVL 245
>gi|448330992|ref|ZP_21520266.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema versiforme
JCM 10478]
gi|445610116|gb|ELY63891.1| RNA methylase, NOL1/NOP2/sun family protein [Natrinema versiforme
JCM 10478]
Length = 302
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 114/249 (45%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV----VQKDDLVPDLLILPPG 105
I+D A + P VRVNT+K V+ + L ++ + + V DL PG
Sbjct: 11 IDDFDAFLAACERPLGNAVRVNTIKATVERTLAALEREGIGYEQADWNSRVLDLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K +AALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPVVLDPEPGERVWDCCAAPGGKATQIAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V + D N + + E L+D CS GT
Sbjct: 127 VANDNNLGRISALRFNAERLGATSLAVTNADARNYSLERFEFDEFDRTLVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVE 284
+ D L + + GH ++ ++ QK +R A+ + VVYSTC+ E
Sbjct: 187 RKNPD-ALDNWSEGH---------ISSVAGIQKGIIRRAIQATREGGTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE +++ L
Sbjct: 237 NEAIVQHAL 245
>gi|253573323|ref|ZP_04850666.1| fmu domain-containing protein [Paenibacillus sp. oral taxon 786
str. D14]
gi|251846851|gb|EES74856.1| fmu domain-containing protein [Paenibacillus sp. oral taxon 786
str. D14]
Length = 513
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/277 (28%), Positives = 118/277 (42%), Gaps = 46/277 (16%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHV 110
E+ Y + D PK +RVNTLK+D + +VP L P C
Sbjct: 20 EEFANFYASYDSPKFAGIRVNTLKIDP------------IDFKAVVPFDLRPIPWCQTGY 67
Query: 111 ----------HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK 160
HP G ++Q ++ L PG +VLD C+APG K+ +AA +
Sbjct: 68 YVEEQAKPGKHPYYHAGLYYIQEPSAMAPVELLDVTPGERVLDLCAAPGGKSTQIAAKLC 127
Query: 161 GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCS 220
G+G +V ++N ER + L I+L G N VL + P++ + IL+D CS
Sbjct: 128 GRGMLVTNDINPERTKALAKNIELYGVRNAVVLGESPERIARAFPSFFD--KILIDAPCS 185
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTC 278
G G R D + H E + K + Q++ L+ A + PG R+VYSTC
Sbjct: 186 GEGMF--RKDEDMARH--------WEPNWVRKYADMQQEILKSAAAMLAPG-GRIVYSTC 234
Query: 279 SIHQVENEDVIKS---------VLPIAMSFGFQLATP 306
+ ENE I V+P+ + +G P
Sbjct: 235 TFAPEENEATIAEFLLEHPEFRVVPLGLDYGIAPGRP 271
>gi|358368159|dbj|GAA84776.1| nucleolar RNA methyltransferase [Aspergillus kawachii IFO 4308]
Length = 758
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 116/258 (44%), Gaps = 36/258 (13%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ + S L + VV L P L +
Sbjct: 282 EAFAFFEANETPRPVVIRTNTLRTNRRSLAQALINRGVV----LEPVGKWSKVGLQVFES 337
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G +Q +S + ALAP+P +VLD SAPG KT +++ALM+ G
Sbjct: 338 AVPLGATPEYLAGHYIIQAASSFLPVMALAPQPNERVLDMASAPGGKTTYISALMRNTGC 397
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG- 223
++A + +K R + L I G N V + D PK A +LLD C+G+G
Sbjct: 398 VIANDASKPRAKGLIGNIHRLGCKNTIVTNMDARTAFPK--AMGGFDRVLLDAPCTGTGV 455
Query: 224 --------TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
T+ D L H M+R L+A ++ HA G +VY
Sbjct: 456 ISKDPGVKTSKNERDFLAIPH----------MQRQLLLAAID--SVDHASKTGGY--IVY 501
Query: 276 STCSIHQVENEDVIKSVL 293
STCS+ ENE V++ VL
Sbjct: 502 STCSVTVEENEAVVQYVL 519
>gi|95928560|ref|ZP_01311307.1| sun protein [Desulfuromonas acetoxidans DSM 684]
gi|95135350|gb|EAT17002.1| sun protein [Desulfuromonas acetoxidans DSM 684]
Length = 479
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 92/312 (29%), Positives = 143/312 (45%), Gaps = 34/312 (10%)
Query: 1 MEEARRIGL-----------HTNLRHP---LWPVGDAEKFLMLHKGAIQLALAQLLVRNK 46
+E ARR GL + LR P +WP + L G L+L L +
Sbjct: 128 VELARRCGLERVSGLVNGVLRSYLREPNRVVWPDPRRDTQGWLEHG---LSLPHWLAQRW 184
Query: 47 V--KSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP 103
+ E MAL ++ P VRVNTLKM ++ V +L ++ + P+ ++LP
Sbjct: 185 LVQYGAEGAMALAESQLSAPPVTVRVNTLKMTRNAFVAQLKQRDIAAEPTRFAPEGVVLP 244
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
DL P G +Q +AS ++A L+ +PG ++LD C+APG KT HLAAL +
Sbjct: 245 HAGDLQRLPGREEGWYQVQDEASMLIAHLLSVEPGQRLLDGCAAPGGKTTHLAALTDNRS 304
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+I+A +L+ +R+ L+ K G I L D + +D + +L+D CSG G
Sbjct: 305 EILALDLHSQRLEILQQGAKRLGCQQIRTLACD-MTQPCEDLSAGGFDRVLIDAPCSGLG 363
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGVERVVYSTCSIH 281
L + S T+++ L K Q++ L A L PG ++YS C+
Sbjct: 364 V-------LRRNPESRWRRKQTDIKVLAKT---QRQILHQAAELVVPG-GLLLYSLCTTT 412
Query: 282 QVENEDVIKSVL 293
E+ V+ L
Sbjct: 413 PEESTAVVADFL 424
>gi|448298241|ref|ZP_21488271.1| RNA methylase [Natronorubrum tibetense GA33]
gi|445591782|gb|ELY45979.1| RNA methylase [Natronorubrum tibetense GA33]
Length = 303
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/249 (29%), Positives = 115/249 (46%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVV-QKDDLVPDLLIL---PPG 105
++D A + P VRVNT+K V+ + L + V ++ + P +L L PG
Sbjct: 11 VDDFEAFLAACERPLGNAVRVNTIKASVERTLETLDEDGVTYEQANWNPRVLRLETDSPG 70
Query: 106 CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
+G Q + S++ L P+PG +V D C+APG K +AALM +G +
Sbjct: 71 STWTSFHGFTHG----QEEVSAVPPVVLDPQPGERVWDCCAAPGGKATQIAALMDDRGTV 126
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
VA + N R+ L+ + GA ++ V D N K + E L+D CS GT
Sbjct: 127 VANDNNLGRISALRFNAERLGATSLAVTVDDARNYSLKRFPFDEFDRTLVDAPCSCEGTI 186
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVE 284
+ D L + + GH ++ ++ QK LR A+ + VVYSTC+ E
Sbjct: 187 RKNPD-ALDNWSEGH---------ISSIAGIQKGILRRAIQATREGGTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V++ L
Sbjct: 237 NEAVVQHAL 245
>gi|399908755|ref|ZP_10777307.1| Sun protein [Halomonas sp. KM-1]
Length = 449
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 76/250 (30%), Positives = 125/250 (50%), Gaps = 23/250 (9%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQK-DDLVPDLLILPPGCDLH 109
+D A+ + + P P +R+N + D ++ + L + + + PD L+L CD+
Sbjct: 171 DDWRAIAEANNQPGPMALRINRRRGDREAYLARLVESGIDARLCTHSPDGLVLEKPCDVQ 230
Query: 110 VHPLIVNGCVFLQGKASSMVAA----ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165
P G V +Q +A+ + A ALAP+PG +VLDAC APG KT HL L ++
Sbjct: 231 ALPGFTEGDVSVQDEAAQLAAELLGPALAPRPGGRVLDACCAPGGKTAHLLELF--DIEL 288
Query: 166 VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+A + + R+ R++DT++ G + ++H D D D + AILLD CSG+G
Sbjct: 289 LALDSDAVRLARVEDTLERLGLSAT-LVHADATGRDWWD--GTPFDAILLDAPCSGTGVI 345
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRH--ALSFPGVERVVYSTCSIHQV 283
D AS + KL+ Q + L + L PG ++Y+TCS+ +
Sbjct: 346 RRHPDIKRLRRASD----------IAKLAELQTRLLDNLWPLLRPGGS-LLYATCSVLRE 394
Query: 284 ENEDVIKSVL 293
EN++ I++ L
Sbjct: 395 ENDEQIRAFL 404
>gi|67479223|ref|XP_654993.1| Proliferating-cell nucleolar antigen p120 [Entamoeba histolytica
HM-1:IMSS]
gi|56472094|gb|EAL49607.1| Proliferating-cell nucleolar antigen p120, putative [Entamoeba
histolytica HM-1:IMSS]
Length = 495
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 48/270 (17%)
Query: 56 LYQTPDVPKPRYVRVNTLK------------MDVDSAVLELGKQFVVQKDDLVPDLLILP 103
+ + P+P +RVNTLK V+ ++E K +V D VP
Sbjct: 204 FMEANEAPRPVTIRVNTLKSRRRELAQKLINRGVNVDMIEWSKSGLVVYDSQVP------ 257
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
+ P + G LQ +S + ALAP+P K+LD C+APG KT H+AALMK G
Sbjct: 258 ----IGATPEYLAGQYILQSSSSWVSVIALAPQPNEKILDMCAAPGGKTTHIAALMKDTG 313
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+VA +++K+R++ + + G N + + D PK + +L+D C+G G
Sbjct: 314 VLVANDISKDRLKAVIGNVHRLGITNTIITNCDGHEF-PK--VMGQFDRVLVDAPCTGLG 370
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYSTC 278
+ S + +E + + + QK+ + HA+ + VVYSTC
Sbjct: 371 ---------IISRDAAVKLSKSEQD-IKDCTRIQKELILHAIDSVNPKSKTGGYVVYSTC 420
Query: 279 SIHQVENEDVIK--------SVLPIAMSFG 300
SI ENE VI V+PIA+ G
Sbjct: 421 SITVEENEAVIDYALKKRNVKVVPIALQDG 450
>gi|440492091|gb|ELQ74688.1| tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2)
[Trachipleistophora hominis]
Length = 305
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 118/248 (47%), Gaps = 23/248 (9%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVPDLL-ILPPGC 106
E+ + + +P +RVNTLK ++ +L+ G V+ D + L I
Sbjct: 20 EERAVFLEESEKKRPIVIRVNTLKATKKELAKNLLQRG--MTVESLDFYSNCLTIYDSKV 77
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
+ P ++G ++QG +S + L K VLD C++PG K+ +A +MK G +
Sbjct: 78 PVGATPEYLDGWYYIQGASSILAVMNLDVKEHMSVLDMCASPGGKSTFIAEMMKNTGMLY 137
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
E N ER+ L + G N V++ + L+L+ + +V +LLD CSG+GT +
Sbjct: 138 LVENNPERISSLSGNLLRMGVQNSVVINMNVLDLEIE-----KVDRVLLDAPCSGTGTIS 192
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQVEN 285
+ GH TE + L + + QKK + S G ++YSTCS+ EN
Sbjct: 193 K----------DGHAKTLTE-DDLKRYTEMQKKLILKGFDSLKGNGIMIYSTCSVLADEN 241
Query: 286 EDVIKSVL 293
E V++ +L
Sbjct: 242 ECVVEYLL 249
>gi|357460225|ref|XP_003600394.1| hypothetical protein MTR_3g060700 [Medicago truncatula]
gi|355489442|gb|AES70645.1| hypothetical protein MTR_3g060700 [Medicago truncatula]
Length = 1069
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 85/276 (30%), Positives = 125/276 (45%), Gaps = 35/276 (12%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP----DLLILPP 104
+LM L + + P+P +R NTLK D+ ++ G V D L L++
Sbjct: 635 ELMELIEAFEKPRPICLRTNTLKTRRRDLADVLINRG----VNLDPLSKWSKVGLVVYDS 690
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
+ P + G LQ +S + ALAP+ +++D +APG KT ++AALMK G
Sbjct: 691 QVPIGATPEYMAGFYMLQSASSFLPVMALAPQEKERIVDMAAAPGGKTTYIAALMKNSGI 750
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I A E+ R++ L + G +N V + D L PK ++ V +LLD CSG+G
Sbjct: 751 IFANEMKVPRLKSLTANLHRMGVSNTVVSNYDGKEL-PKVLGFNSVDRVLLDAPCSGTG- 808
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF-----PGVERVVYSTCS 279
++ S T+ +E + K + QK+ L A+ VVYSTCS
Sbjct: 809 -------VISKDESVKTS--KNLEDIKKCAHLQKELLLAAIDMVDSYSKSGGYVVYSTCS 859
Query: 280 IHQVENEDVIKSVL--------PIAMSFGFQLATPF 307
I ENE VI VL P + FG T F
Sbjct: 860 IMVAENEAVIDYVLKRRDVKLVPCGLDFGRPGFTKF 895
>gi|320159374|ref|YP_004191752.1| tRNA and rRNA cytosine-C5-methylase [Vibrio vulnificus MO6-24/O]
gi|319934686|gb|ADV89549.1| tRNA and rRNA cytosine-C5-methylase [Vibrio vulnificus MO6-24/O]
Length = 404
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 81/238 (34%), Positives = 113/238 (47%), Gaps = 24/238 (10%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQFVVQKD-DLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P RY+RVN LK D D L K+ V D V L + L +G
Sbjct: 150 PAKRYLRVNLLKCDRDDLAKRLNKEGVSTVPVDGVESALEVTSNSALFKTQSFADGWFEQ 209
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q S VAAAL KPG +V+DAC+ G KT+HLAA+M GKG+++A ++ + ++ LK+
Sbjct: 210 QDAGSQKVAAALDVKPGMRVIDACAGAGGKTLHLAAMMAGKGRLLAMDVEEWKLNNLKER 269
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRA--ILLDPSCSGSGTAAERLDHLLPSHASG 239
+ +GA N+E L K ++ A +LLD CSG G +L +
Sbjct: 270 ARRAGAHNVETR----LITSSKTIKRLKLSADRVLLDVPCSGLG--------VLKRNPDA 317
Query: 240 HTADPTEMERLNKLSAFQKKALRHALSFPGVERV----VYSTCSIHQVENEDVIKSVL 293
D TE ERL L Q L S+ + +V VY+TCSI EN + + L
Sbjct: 318 KWRD-TE-ERLPVLMELQAHIL---ASYSRMVKVGGMLVYATCSIMPCENRGQVDAFL 370
>gi|326790876|ref|YP_004308697.1| sun protein [Clostridium lentocellum DSM 5427]
gi|326541640|gb|ADZ83499.1| sun protein [Clostridium lentocellum DSM 5427]
Length = 445
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 118/238 (49%), Gaps = 21/238 (8%)
Query: 66 RYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKA 125
RY + T K++ + + G Q ++ + + L +L P G +Q ++
Sbjct: 183 RYNTLKTNKLEFEETLKVEGIQL--KEGAFLEEAFYLKGVDNLQNSPSFKKGEWTVQDES 240
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ +VA +AP+ G +LD CSAPG K++H+A LM+ G+IV+C+++ ++ +K +
Sbjct: 241 AMLVAHVMAPQKGDCILDMCSAPGGKSIHMAELMENAGRIVSCDIHPHKLELIKKNAERM 300
Query: 186 GAANIE-VLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
G IE L L K+ Y E +LLD CSG G + D + +H S
Sbjct: 301 GITIIEPTLQDGTL----KNECYVEAFDKVLLDAPCSGLGIMKRKPD--IRTHKSK---- 350
Query: 244 PTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
E L ++ A QKK A+S+ PG R+VYSTC+I ENE ++ + + +
Sbjct: 351 ----EGLLEIVALQKKLALAAISYLKPG-GRLVYSTCTISHEENEGMVSYIKALGLEL 403
>gi|448414552|ref|ZP_21577621.1| nol1/nop2/sun family RNA methylase [Halosarcina pallida JCM 14848]
gi|445682118|gb|ELZ34542.1| nol1/nop2/sun family RNA methylase [Halosarcina pallida JCM 14848]
Length = 312
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 80/255 (31%), Positives = 116/255 (45%), Gaps = 23/255 (9%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDL 108
++D A D P P VRVNT+K + A L + V + D P +L L
Sbjct: 11 VDDEEAFLSACDRPLPSVVRVNTIKATAERARSALDAEGVGYEVTDWHPGILKLDERGPG 70
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P +G + Q + S++ A AL P+PG V DAC+APG+KT LA LM G ++
Sbjct: 71 TTWPYF-HGWLHGQEEVSALPALALDPEPGEVVWDACAAPGSKTTQLADLMDDTGILIGN 129
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLHGDFLNL-------DPKDP-AYSEVRAILLDPSCS 220
+ N R+ L+ + G +N+ V + D N D DP L+D CS
Sbjct: 130 DNNLGRLSALRHNAERLGVSNLVVTNQDARNYSLKPFGEDTDDPQTVGAFDRALVDAPCS 189
Query: 221 GSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTC 278
GT + D L D M+ ++ ++ QK LR A+ + PG VVYSTC
Sbjct: 190 CEGTIRKNPDAL----------DRWTMDHVHSVAGIQKGILRRAVQATRPG-GTVVYSTC 238
Query: 279 SIHQVENEDVIKSVL 293
+ ENE V+ +
Sbjct: 239 TFAPEENEAVLDHAI 253
>gi|357238783|ref|ZP_09126119.1| NOL1/NOP2/sun family protein [Streptococcus ictaluri 707-05]
gi|356752505|gb|EHI69630.1| NOL1/NOP2/sun family protein [Streptococcus ictaluri 707-05]
Length = 395
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 104/212 (49%), Gaps = 16/212 (7%)
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
V GCV+ Q A+ MVA PK G +VLD +APG KT HL + + G +V+ E++K+R
Sbjct: 29 VTGCVYSQEPAAQMVAQVAVPKKGNRVLDLAAAPGCKTTHLLSYLDNTGLLVSNEISKKR 88
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
+ L + ++ GA N+ V++ NL P + + I+ D CSG G + + +
Sbjct: 89 SKILVENVERFGAQNVVVINESAENLAKVFPEFFDT--IVFDGLCSGEGMFRKDPEAI-- 144
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSV 292
H P E L QK L +L+ PG E ++YSTC+ Q ENE V+ +
Sbjct: 145 --QYWHKDYPLECANL------QKSILDQSLAMPKPGGE-LIYSTCTWSQEENEGVVNWL 195
Query: 293 LPIAMSFGFQLATPFPNGTAEASQFLKALSIY 324
L S+ L P NG E +A +Y
Sbjct: 196 LE-NYSYLQLLDIPKINGMVEGIDMPQAARMY 226
>gi|428771628|ref|YP_007163418.1| sun protein [Cyanobacterium aponinum PCC 10605]
gi|428685907|gb|AFZ55374.1| sun protein [Cyanobacterium aponinum PCC 10605]
Length = 455
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 96/180 (53%), Gaps = 18/180 (10%)
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G +Q ++ +V L P+ G ++DAC+APG KT H+A LM KGK++A + +R+
Sbjct: 242 GLFTIQDASAQLVTHLLNPQAGETIIDACAAPGGKTTHIAELMGDKGKVIAIDTYAKRLE 301
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
++K+ G IEV GD L + ++ +L+D CSG GT H P
Sbjct: 302 KIKENATRLGLTCIEVKEGDSSELTEWE---NQADRVLVDVPCSGLGTL-----HTNPDI 353
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVIKSVL 293
P E+E+L +L Q+K L +A + G+ +VY+TC+++Q ENE+++ L
Sbjct: 354 R--WRKKPEEIEKLTRL---QQKILTNASKWVKNGGI--LVYATCTLNQKENENIVTEFL 406
>gi|373115333|ref|ZP_09529508.1| ribosomal RNA small subunit methyltransferase B [Lachnospiraceae
bacterium 7_1_58FAA]
gi|371670487|gb|EHO35567.1| ribosomal RNA small subunit methyltransferase B [Lachnospiraceae
bacterium 7_1_58FAA]
Length = 436
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 132/275 (48%), Gaps = 20/275 (7%)
Query: 40 QLLVRNKVKSI--EDLMALYQTPDVPKPRYVRVNTLKMDVDS-AVLELGKQFVVQKDDLV 96
Q LV + V + E+ AL + P +VNTLK+ + A + + V+ +
Sbjct: 147 QWLVDSFVARLGREEAEALLAADNGEPPTCAQVNTLKISAEELAAMLTAEGVAVEPHPWL 206
Query: 97 PDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
PD L L L G ++Q A+ + A AP+PGW+VLDAC+APG K+ A
Sbjct: 207 PDCLFLNGTGSLEHLEAFQKGYFYIQDAAAHLAVLAAAPQPGWRVLDACAAPGGKSFAAA 266
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN-LDPKDPAYSEVRAILL 215
M+ +G + +C+++ ++R ++ + G ++++H + L+ + K + I+
Sbjct: 267 IAMENRGSVTSCDIHPHKLRLIEAGYQRLG---LDIIHANLLDGKERKAELLNSFDLIIA 323
Query: 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
D CSG G ++ D DP +E L + A + + GV ++Y
Sbjct: 324 DVPCSGLGIIRKKPDI--------RYKDPEPLENLPCVQAAILDNVADYVRPGGV--LLY 373
Query: 276 STCSIHQVENEDVIKSVLPIAMSF---GFQLATPF 307
+TC++ + ENE V+++ L F GFQ++ PF
Sbjct: 374 ATCTLLERENEGVVRAFLDKQRDFTLEGFQVSGPF 408
>gi|145251900|ref|XP_001397463.1| S-adenosylmethionine-dependent methyltransferase superfamily
domain-containing protein [Aspergillus niger CBS 513.88]
gi|134083004|emb|CAK42767.1| unnamed protein product [Aspergillus niger]
Length = 762
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/258 (30%), Positives = 116/258 (44%), Gaps = 36/258 (13%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ + S L + VV L P L +
Sbjct: 282 EAFAFFEANETPRPVVIRTNTLRTNRRSLAQALINRGVV----LEPVGKWSKVGLQVFES 337
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G +Q +S + ALAP+P +VLD SAPG KT +++ALM+ G
Sbjct: 338 AVPLGATPEYLAGHYIIQAASSFLPVMALAPQPNERVLDMASAPGGKTTYISALMRNTGC 397
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG- 223
++A + +K R + L I G N V + D PK A +LLD C+G+G
Sbjct: 398 VIANDASKPRAKGLIGNIHRLGCKNTIVTNMDARTAFPK--AMGGFDRVLLDAPCTGTGV 455
Query: 224 --------TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVY 275
T+ D L H M+R L+A ++ HA G VVY
Sbjct: 456 ISKDPGVKTSKNERDFLAIPH----------MQRQLLLAAID--SVDHASKTGGY--VVY 501
Query: 276 STCSIHQVENEDVIKSVL 293
STCS+ ENE V++ VL
Sbjct: 502 STCSVTVEENEAVVQYVL 519
>gi|374326205|ref|YP_005084405.1| sun family protein [Pyrobaculum sp. 1860]
gi|356641474|gb|AET32153.1| sun family protein [Pyrobaculum sp. 1860]
Length = 417
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 122/260 (46%), Gaps = 33/260 (12%)
Query: 67 YVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL-QGKA 125
++R+NTLK DVD A+ L + V+ +P ++L + V V + Q A
Sbjct: 164 WLRINTLKADVDKALKILEAEAEVETHPRIPFAVLLKSSKRPVQYLEAVRRFVAIPQDLA 223
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
S +L P+PG +++D +APG KT +A L +G+ KIVA +L+++RV R+K ++
Sbjct: 224 SVYAVLSLKPEPGDRIVDLAAAPGMKTSLVAQLAEGRAKIVAVDLSQKRVARMKQLLRRV 283
Query: 186 GAAN-IEVLHGDFLNLDPK--DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTA 242
GA + +EV+ D L + D A LLD C+ SG T
Sbjct: 284 GAGDAVEVVRSDSRKLKTRLFDKA-------LLDAPCTSSG---------------AFTK 321
Query: 243 DPT-----EMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAM 297
+P +E + S Q++ L++AL G VVY+ CSI E E+V+ SV
Sbjct: 322 EPAVKIYPRLEDAPRYSRIQRELLKNALELAG--EVVYAVCSILPEEGEEVVGSVEAAPE 379
Query: 298 SFGFQLATPFPNGTAEASQF 317
LA P+ G F
Sbjct: 380 KPLEDLADPYGRGGVGGRTF 399
>gi|403337775|gb|EJY68110.1| Ribosomal RNA methyltransferase nop2-like protein [Oxytricha
trifallax]
Length = 715
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 112/243 (46%), Gaps = 31/243 (12%)
Query: 64 KPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPPGCDLHVHPLIVN 116
+P +R NTLK + +L K + + +L P L I + P +
Sbjct: 194 RPMTIRTNTLK----TKRKDLAKTLIQRGVNLDPVAEWSKVGLKIYDSAVPIGATPEYLA 249
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G LQ +S + ALAP+P K+LD +APG KT ++A LMK G +VA +L KER++
Sbjct: 250 GHYILQSASSFLPVIALAPQPNEKILDMAAAPGGKTTYIAQLMKNTGVLVANDLKKERLK 309
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPA-YSEVRAILLDPSCSGSGTAAERLDHLLPS 235
L + G N V++ D + P+ Y++ LLD CSG G A PS
Sbjct: 310 SLNANLHRLGVTNTVVINHDGRKI----PSLYTKFDRCLLDAPCSGLGVIARD-----PS 360
Query: 236 HASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYSTCSIHQVENEDVIK 290
T E + KLS QK+ ++ A+ +VYSTCSI ENE V+
Sbjct: 361 IKVQKT-----REDVKKLSHLQKELIKAAIDIVDAHSKTGGYIVYSTCSISVEENEWVVD 415
Query: 291 SVL 293
L
Sbjct: 416 YAL 418
>gi|407922983|gb|EKG16073.1| Bacterial Fmu (Sun)/eukaryotic nucleolar NOL1/Nop2p [Macrophomina
phaseolina MS6]
Length = 786
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 88/298 (29%), Positives = 131/298 (43%), Gaps = 46/298 (15%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ + +L + + + L P L I
Sbjct: 328 EAFAFFEANETPRPVVIRTNTLR----THRRQLAQALINRGVTLEPVGKWSKVGLQIFES 383
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
+ P + G LQ +S + ALAP+ ++LD SAPG KT H+AALMK G
Sbjct: 384 QVPIGATPEYLAGHYILQAASSFLPVMALAPQENERILDMASAPGGKTTHIAALMKNTGC 443
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I A + NK+R + L I G N V + D + + V LLD CSG+G
Sbjct: 444 IFANDANKDRAKGLIGNIHRLGVKNTIVCNYDAMEFPRVIGGFDRV---LLDAPCSGTGV 500
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-----SFPGVERVVYSTCS 279
A+ AS T + TE + + +L QK+ L HA+ S +VYSTCS
Sbjct: 501 IAK--------DASVKT-NKTEKDFM-RLPHLQKQLLLHAIDSVDHSSKTGGYIVYSTCS 550
Query: 280 IHQVENEDVIKSVL---------PIAMSFGFQLATPFPNGTAEASQF---LKALSIYF 325
+ ENE V++ L ++FG + T F + QF LK Y+
Sbjct: 551 VTVDENERVVQYALEKRPNVKLVSTGLTFGKEGFTSF-----QGRQFHHSLKETRRYY 603
>gi|313894854|ref|ZP_07828414.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
oral taxon 137 str. F0430]
gi|312976535|gb|EFR41990.1| ribosomal RNA small subunit methyltransferase B [Selenomonas sp.
oral taxon 137 str. F0430]
Length = 451
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 73/248 (29%), Positives = 121/248 (48%), Gaps = 20/248 (8%)
Query: 65 PRYVRVNTLKMDVDSAVLEL---GKQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P +RVNTL++D + + +L G Q + VPD +++ L + G +
Sbjct: 188 PLSLRVNTLRIDREGLLEKLAAAGAQ--ARPSATVPDGIVVTSHGTLDALAPLREGLCQV 245
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
Q ++S +VA L PG V+DAC+APG KT H+A M+ +GKI A ++ + ++ R+++
Sbjct: 246 QDESSMLVAHVLGAAPGMTVIDACAAPGGKTTHIAQRMENRGKIYAFDVYEGKIARIENN 305
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
+ G IE D + + ++ +L+D CSG G + D +
Sbjct: 306 ARRLGIDIIETWMLDAREIGARCAGTAD--RVLIDAPCSGFGVLRRKPD-------ARWR 356
Query: 242 ADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSF 299
P E+ L KL Q++ L A + PG +VYSTC++ ENE V++ L + F
Sbjct: 357 RKPEELGALPKL---QQEILAGAAAAVRPGGA-LVYSTCTMETAENEGVVQRFLELHPEF 412
Query: 300 GFQLATPF 307
+ A F
Sbjct: 413 VLERAGAF 420
>gi|113474586|ref|YP_720647.1| sun protein [Trichodesmium erythraeum IMS101]
gi|110165634|gb|ABG50174.1| sun protein [Trichodesmium erythraeum IMS101]
Length = 443
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 116/243 (47%), Gaps = 20/243 (8%)
Query: 68 VRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGC-DLHVHPLIVNGCVFLQGKA 125
+R+N LK V+ + + + V + VP L L + P G +Q +
Sbjct: 181 LRINPLKTSVEEVEIAMKNIGISVSRILQVPQALRLNGAVGQIQKLPGYNEGWWSIQDSS 240
Query: 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185
+ +V L P+PG ++DAC+APG KT H+ LM GKI A ++ R+++L+ +
Sbjct: 241 AQLVCYLLNPQPGEIIIDACAAPGGKTTHIGELMGDNGKIFAIDMTASRLKKLESNTERL 300
Query: 186 GAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPT 245
+I + GD NL ++ +LLD CSG GT R D
Sbjct: 301 QLKSISISRGDSRNL---TEFINQADRVLLDVPCSGLGTLHRRADARWRK---------- 347
Query: 246 EMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQL 303
+E + +L+ Q + L +A + PG +VY+TC+I+ +ENE VI+ L ++ +++
Sbjct: 348 TLENIGELAKLQGELLENAAKWVKPG-GVLVYATCTIYPLENEGVIEKFL--TNNYEWEI 404
Query: 304 ATP 306
P
Sbjct: 405 EAP 407
>gi|315427045|dbj|BAJ48662.1| tRNA and rRNA cytosine-C5-methylases [Candidatus Caldiarchaeum
subterraneum]
gi|343485713|dbj|BAJ51367.1| tRNA and rRNA cytosine-C5-methylases [Candidatus Caldiarchaeum
subterraneum]
Length = 320
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 117/232 (50%), Gaps = 12/232 (5%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFL 121
P P RVNTLK+D ++ ++ L ++ V++ D P L + G V+
Sbjct: 41 PLPDSFRVNTLKIDRENCLILLREEGLTVRRIPFTVDGFYAEPEGLLTDSLWHMLGYVYA 100
Query: 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181
QG S +V L +PG VLD C+APG+KT H+AA ++G+G +VA ++++ R++ L
Sbjct: 101 QGPVSILVTELLDVEPGHWVLDLCAAPGSKTTHIAARLRGEGVVVANDVSRTRIKALSSN 160
Query: 182 IKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHT 241
++ G N + D + + +++D C+ G ++ +L + +G +
Sbjct: 161 MQRCGVVNGVLTLADGRRFGYRYRGMFD--RVMIDAPCTSLGIGSKDWS-VLRNWTTGSS 217
Query: 242 ADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293
A RL++L + AL G+ ++YSTC+ H ENE V+ ++L
Sbjct: 218 A------RLSRLQTSLLFSGYMALKPGGI--LIYSTCTFHPFENETVVNNLL 261
>gi|425736791|ref|ZP_18855067.1| 16S rRNA methyltransferase B [Staphylococcus massiliensis S46]
gi|425483263|gb|EKU50415.1| 16S rRNA methyltransferase B [Staphylococcus massiliensis S46]
Length = 434
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 79/265 (29%), Positives = 119/265 (44%), Gaps = 26/265 (9%)
Query: 55 ALYQTPDVPK------PRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILPPGCD 107
L QT D+ K P+ VRVN ++ A +L + + V+ D +P+ L + G
Sbjct: 159 GLDQTRDIAKAMLQSAPQTVRVNETRITPSEAKAQLETEGYQVETCDELPECLHVS-GKP 217
Query: 108 LHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVA 167
+ L G V +Q K+S VA L P+ G +LD CSAPG K H+ + G ++A
Sbjct: 218 IMTSGLFKAGKVSIQDKSSMFVANVLQPETGDAILDTCSAPGGKACHIGEKLNQTGHVLA 277
Query: 168 CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE 227
+++ +++ ++ +K G NIE + D P IL+D CSG G
Sbjct: 278 SDVHAHKMKLIEHNVKKLGLKNIEAIQH-----DATQPYNQTFDKILVDAPCSGLGVMRH 332
Query: 228 RLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVEN 285
+ P T D + L Q L +A PG +VYSTC+I Q+EN
Sbjct: 333 K-----PEIKYRETKDS-----VLSLVDIQLDILTNASKHLKPG-GTLVYSTCTIEQMEN 381
Query: 286 EDVIKSVLPIAMSFGFQLATPFPNG 310
E+VI + L F F F +G
Sbjct: 382 ENVIYTFLKQNPEFEFLPFEDFKSG 406
>gi|172035456|ref|YP_001801957.1| rRNA SAM-dependent methyltransferase [Cyanothece sp. ATCC 51142]
gi|354555546|ref|ZP_08974847.1| sun protein [Cyanothece sp. ATCC 51472]
gi|171696910|gb|ACB49891.1| Fmu, rRNA SAM-dependent methyltransferase [Cyanothece sp. ATCC
51142]
gi|353552605|gb|EHC22000.1| sun protein [Cyanothece sp. ATCC 51472]
Length = 452
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 135/282 (47%), Gaps = 42/282 (14%)
Query: 29 LHKGAIQLALAQLLVRNKVK-----SIEDLMALY-QTPDVPKPRYVRVNTLKMDVDSAVL 82
+ K AIQ + ++ V+ + E L + QTP + +R+N LK +++
Sbjct: 149 IEKIAIQYSFPDWMIETWVQQWGEATTEQLCHWFNQTPTID----IRINPLKTTLETLQT 204
Query: 83 ELGKQFVVQKDDLVPDLLILPP-GCDLHVH---------PLIVNGCVFLQGKASSMVAAA 132
+L + + + P PP C L + P G +Q ++ +V+
Sbjct: 205 QLTEAGI----NATP----FPPLPCTLRLQGKIGSIQTLPGFHQGHWTIQDSSAQLVSYL 256
Query: 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEV 192
L P+PG ++DAC+APG KT H+A LM +G I+AC+ R+++++ + +I+
Sbjct: 257 LDPQPGETIIDACAAPGGKTTHMAELMGDQGTIIACDRTPSRLKKVQQNAQRLQLNSIQT 316
Query: 193 LHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNK 252
+ GD +L P+ + +L+D CSG GT H P T E++ +
Sbjct: 317 ILGDSRHL-PQ--LINTADRVLVDVPCSGLGTL-----HRHPDIRWRQTP-----EKIQE 363
Query: 253 LSAFQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVL 293
LS Q++ L A + + +VY+TC+++ EN+ +I+S L
Sbjct: 364 LSRLQQEILTQAAQWVKPQGTLVYATCTLNPTENQQIIESFL 405
>gi|428215873|ref|YP_007089017.1| ribosomal RNA small subunit methyltransferase RsmB [Oscillatoria
acuminata PCC 6304]
gi|428004254|gb|AFY85097.1| ribosomal RNA small subunit methyltransferase RsmB [Oscillatoria
acuminata PCC 6304]
Length = 456
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/232 (31%), Positives = 110/232 (47%), Gaps = 22/232 (9%)
Query: 68 VRVNTLKM---DVDSAVLELGKQFVVQKDDLVPDLLILPPGCD-LHVHPLIVNGCVFLQG 123
+R+N LK +V++A G Q V + +P L L G + P G +Q
Sbjct: 191 LRINPLKTTLEEVETAFQSAGVQ--VARLPHLPQALRLCSGAGAIENLPGYQAGWWTIQD 248
Query: 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIK 183
++ +V + L KPG +DAC+APG KT HLA +M G I AC+ R++++K+
Sbjct: 249 SSAQLVGSLLEAKPGQVAIDACAAPGGKTTHLAEMMGDTGTIWACDKAPSRLKKVKENAD 308
Query: 184 LSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTAD 243
+I+ L GD N + +LLD CSG GT R D +
Sbjct: 309 RLQLQSIQTLSGDSRNF---TQFHQTADWVLLDAPCSGLGTLHRRAD-------ARWRQT 358
Query: 244 PTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
P E + +LS Q + L ++ PG +VY+TC+IH ENE+VI L
Sbjct: 359 P---ENIQELSQLQGELLAETANWVKPG-GHLVYATCTIHPKENEEVILGFL 406
>gi|384135896|ref|YP_005518610.1| Fmu (Sun) domain-containing protein [Alicyclobacillus
acidocaldarius subsp. acidocaldarius Tc-4-1]
gi|339289981|gb|AEJ44091.1| Fmu (Sun) domain protein [Alicyclobacillus acidocaldarius subsp.
acidocaldarius Tc-4-1]
Length = 477
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/210 (35%), Positives = 110/210 (52%), Gaps = 27/210 (12%)
Query: 94 DLVP---DLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGN 150
D+VP D L PG L L G +LQ ++ VA AL P+PG ++LD C+APG
Sbjct: 60 DVVPWAQDGFYLAPGPSLGYTVLHQAGAFYLQDPSAMAVAVALDPQPGERILDLCAAPGG 119
Query: 151 KTVHLA--ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS 208
KT H A A +G ++VA +++++RV L + ++ GA N P+ A +
Sbjct: 120 KTTHAALLAARRGGAQLVANDIHRDRVLALAENVERVGAPCA------ITNEPPEALAAA 173
Query: 209 EVR---AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 265
+ AI++D CSG G R D P+ + D E + A QK+ LRHAL
Sbjct: 174 WPQAFDAIVVDAPCSGEGMF--RKD---PAVRAEWRPDAPE-----RFQALQKEILRHAL 223
Query: 266 SF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+ PG R+VYSTC+++ +ENE V+ +L
Sbjct: 224 TMLKPG-GRLVYSTCTLNPLENEQVVLWLL 252
>gi|429205243|ref|ZP_19196520.1| 23S rRNA m(5)C methyltransferase [Lactobacillus saerimneri 30a]
gi|428146315|gb|EKW98554.1| 23S rRNA m(5)C methyltransferase [Lactobacillus saerimneri 30a]
Length = 466
Score = 89.7 bits (221), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/179 (35%), Positives = 96/179 (53%), Gaps = 15/179 (8%)
Query: 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVR 176
G V+ Q ++ VA A +PG +VLD C+APG K+ LAA ++ +G +V+ E+N +R R
Sbjct: 75 GYVYSQDISAMYVAEVAAAQPGERVLDLCAAPGGKSTQLAAQLQNQGLLVSNEINTKRAR 134
Query: 177 RLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSH 236
L + ++ GA N+ VL+ D N++ PAY + I++D CSG G R DH ++
Sbjct: 135 ILAENMERIGATNVIVLNEDPANMEQYFPAYFD--KIVVDAPCSGEGMF--RKDHNAVTY 190
Query: 237 ASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
H P E + QK L AL PG + +VYSTC+ E+E + +L
Sbjct: 191 WHEHY--PAE------CAVRQKNILNSALKMLRPGGQ-LVYSTCTFAPEEDEQIAAWLL 240
>gi|407036203|gb|EKE38056.1| Proliferating-cell nucleolar antigen p120, putative [Entamoeba
nuttalli P19]
Length = 497
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/259 (30%), Positives = 123/259 (47%), Gaps = 36/259 (13%)
Query: 61 DVPKPRYVRVNTLKMDVDSAVLELGKQFVVQ--KDDLV----PDLLILPPGCDLHVHPLI 114
+ P+P +RVNTLK S EL ++ + + D+V L++ + P
Sbjct: 211 EAPRPVTIRVNTLK----SRRRELAQKLINRGVNVDMVEWSKSGLVVYDSQVPIGATPEY 266
Query: 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKER 174
+ G LQ +S + ALAP+P K+LD C+APG KT H+AALMK G +VA +++K+R
Sbjct: 267 LAGQYILQSSSSWVSVIALAPQPNEKILDMCAAPGGKTTHIAALMKDTGVLVANDISKDR 326
Query: 175 VRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLP 234
++ + + G N + + D PK + +L+D C+G G +
Sbjct: 327 LKAVIGNVHRLGITNTIITNYDGHEF-PK--VMGQFDRVLVDAPCTGLG---------II 374
Query: 235 SHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYSTCSIHQVENEDVI 289
S + +E + + + QK+ + HA+ + VVYSTCSI ENE VI
Sbjct: 375 SRDAAVKLSKSEQD-IKDCTRIQKELILHAIDSVNPKSKTGGYVVYSTCSITVEENEAVI 433
Query: 290 K--------SVLPIAMSFG 300
V+PIA+ G
Sbjct: 434 DYALKKRNVKVVPIALQDG 452
>gi|425450552|ref|ZP_18830377.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 7941]
gi|389768554|emb|CCI06369.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 7941]
Length = 446
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 93/304 (30%), Positives = 145/304 (47%), Gaps = 43/304 (14%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQL-LVRNKVKSIEDLMALY-QTPDVPKPRYVRVNTLKMD 76
P A + +LH + L QL L R V E L + ++PD+ +R+N LK
Sbjct: 139 PENTASRLGILH--SFPDWLVQLWLDRFSVTETEQLCQWFNRSPDLD----IRINPLKTS 192
Query: 77 VDSAVLELGKQFVVQKDDLVPDLLILPPGCDL-----HVHPL--IVNGCVFLQGKASSMV 129
++ EL + ++ L LP C L ++ L G LQ ++ +V
Sbjct: 193 REALENEL------ESANITFHHLKLPLACRLTSGLGNIERLEGFRAGNYTLQDISAQLV 246
Query: 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189
L P+PG ++DAC+APG KT H+A LM +G+I+AC+ R+R+L+ IK
Sbjct: 247 TYLLDPQPGETIIDACAAPGGKTTHIAELMGDQGRILACDQTASRLRQLEANIKRLDLKA 306
Query: 190 IEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
IE+ GD + P + + +L+D CSG GT H LP T E
Sbjct: 307 IEIHLGDSRD----RPQWCGIADRVLIDAPCSGLGTL-----HKLPDIRWRQTP-----E 352
Query: 249 RLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
L L+ Q + L A ++ G+ +VY+TC+++ +ENE VI+ L A +++AT
Sbjct: 353 NLPVLAKRQGELLASAATWVKPKGI--LVYATCTLNPLENEGVIEQFL--AAHPDWKIAT 408
Query: 306 PFPN 309
P N
Sbjct: 409 PDSN 412
>gi|449701642|gb|EMD42424.1| proliferating-cell nucleolar antigen p120, putative [Entamoeba
histolytica KU27]
Length = 503
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 122/270 (45%), Gaps = 48/270 (17%)
Query: 56 LYQTPDVPKPRYVRVNTLK------------MDVDSAVLELGKQFVVQKDDLVPDLLILP 103
+ + P+P +RVNTLK V+ ++E K +V D VP
Sbjct: 212 FMEANEAPRPVTIRVNTLKSRRRELAQKLINRGVNVDMIEWSKSGLVVYDSQVP------ 265
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
+ P + G LQ +S + ALAP+P K+LD C+APG KT H+AALMK G
Sbjct: 266 ----IGATPEYLAGQYILQSSSSWVSVIALAPQPNEKILDMCAAPGGKTTHIAALMKDTG 321
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
+VA +++K+R++ + + G N + + D PK + +L+D C+G G
Sbjct: 322 VLVANDISKDRLKAVIGNVHRLGITNTIITNCDGHEF-PK--VMGQFDRVLVDAPCTGLG 378
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER-----VVYSTC 278
+ S + +E + + + QK+ + HA+ + VVYSTC
Sbjct: 379 ---------IISRDAAVKLSKSEQD-IKDCTRIQKELILHAIDSVNPKSKTGGYVVYSTC 428
Query: 279 SIHQVENEDVIK--------SVLPIAMSFG 300
SI ENE VI V+PIA+ G
Sbjct: 429 SITVEENEAVIDYALKKRNVKVVPIALQDG 458
>gi|347523624|ref|YP_004781194.1| Fmu (Sun) domain containing protein [Pyrolobus fumarii 1A]
gi|343460506|gb|AEM38942.1| Fmu (Sun) domain protein [Pyrolobus fumarii 1A]
Length = 447
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/246 (32%), Positives = 123/246 (50%), Gaps = 41/246 (16%)
Query: 65 PRYVRVNTLKMDVDSAVLELGK--------QFV-----VQKDDLVPDLLILPPGCDLHVH 111
P +RVNTLK V + V L + FV +++ +L P+ V
Sbjct: 178 PLSLRVNTLKTTVGNVVKWLRRLGYKPRVSPFVETVVKIERGELRPE-----------VF 226
Query: 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN 171
L+ G LQ AS+ + LAP+PG ++D C+APG KT HLA L + K I+A E
Sbjct: 227 KLVRRGFAVLQDDASAAASLLLAPRPGETIVDLCAAPGGKTSHLAELTRLKSHIIAFEPY 286
Query: 172 KERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERL 229
+R +L++T++ GA ++++ GD D EV A+L+DP CS +GT A+
Sbjct: 287 PDRAAKLRETLERVGADRVVDIVMGD--GRRAPDMLGEEVADAVLVDPPCSSTGTIAKNP 344
Query: 230 DHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENED 287
D P E+E++ KL Q++ L A PG R++YS CS+ + E ED
Sbjct: 345 D-------VRWRLKPEELEKITKL---QRELLEAAYRIVKPG-GRILYSVCSLLREEGED 393
Query: 288 VIKSVL 293
+I +L
Sbjct: 394 IISWLL 399
>gi|383453946|ref|YP_005367935.1| RsmB/NOP family methyltransferase [Corallococcus coralloides DSM
2259]
gi|380734275|gb|AFE10277.1| RsmB/NOP family methyltransferase [Corallococcus coralloides DSM
2259]
Length = 397
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/298 (27%), Positives = 133/298 (44%), Gaps = 48/298 (16%)
Query: 38 LAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP 97
LA+ VR ED A +VP P +RVN ++ ++ L + V +
Sbjct: 110 LAEHFVRELGTEAEDFCAHL---NVPGPITLRVNPARISREALAARLASEGVTTRPGAWS 166
Query: 98 DLLILPPGC--DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHL 155
L + G +L+ P + G +Q + S ++ + +PG VLD C+ G KT+ L
Sbjct: 167 PLALHVDGARPNLYALPSLREGLFEVQDEGSQLLGLLVEARPGETVLDLCAGAGGKTLQL 226
Query: 156 AALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215
A MK G+++A + + ER+ RL+ +G ++VL P P + R +L
Sbjct: 227 GAAMKDSGRLLAYDPDAERLDRLQQRASRAGLTRVQVLRA------PPSPGLNADR-VLA 279
Query: 216 DPSCSGSGTAAERLD---HLLPSHASGHTADPTEMERLNKLSAFQKKALRHA--LSFPGV 270
D CS G+ D L P + L++ +A Q+ L HA + PG
Sbjct: 280 DAPCSELGSLRRGPDLRFRLTP-------------DSLSRYTAIQRDILAHAGDVVRPG- 325
Query: 271 ERVVYSTCSIHQVENEDVI----------KSVLPIA-------MSFGFQLATPFPNGT 311
RVVY+TC++++ EN+DV+ ++V P A + GF TP +GT
Sbjct: 326 GRVVYATCTVNRAENQDVVADFLRSRPDFQAVTPGAGWLPEACLQDGFLFVTPHRHGT 383
>gi|256071287|ref|XP_002571972.1| nucleolar protein nol1/nop2 [Schistosoma mansoni]
gi|353229499|emb|CCD75670.1| putative nucleolar protein nol1/nop2 [Schistosoma mansoni]
Length = 479
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/251 (31%), Positives = 117/251 (46%), Gaps = 25/251 (9%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVP----DLLILP 103
++++ + + +V +P +R NTLK ++ A++ G V D L P L++
Sbjct: 181 KEIVEVLEANEVDRPVTIRTNTLKTRRRELAQALINRG----VNLDPLEPWSKVGLVVYS 236
Query: 104 PGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKG 163
L P + G LQG +S + AL+P+ G ++LD C+APG KT ++A LMK G
Sbjct: 237 SQVPLGATPEYLAGHYILQGASSMLPVMALSPQLGERILDLCAAPGGKTTYIAQLMKNTG 296
Query: 164 KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSG 223
I A E+N R + L G N + + PK S +L+D CSG+G
Sbjct: 297 TIFANEINPSRAKALLGNCHRMGVTNTVICTENGRKF-PK--IMSNFDRVLVDAPCSGTG 353
Query: 224 TAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQ 282
A+ PS + D + K QK+ L A+ V VVYSTCSI
Sbjct: 354 IIAKD-----PSVKTTKNND-----EIQKCVELQKRLLVAAIDSCKVGGYVVYSTCSILV 403
Query: 283 VENEDVIKSVL 293
ENE+V+ L
Sbjct: 404 EENENVVNFAL 414
>gi|89891171|ref|ZP_01202678.1| tRNA and rRNA cytosine-C5-methylase [Flavobacteria bacterium BBFL7]
gi|89516483|gb|EAS19143.1| tRNA and rRNA cytosine-C5-methylase [Flavobacteria bacterium
BBFL7]
Length = 402
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 107/222 (48%), Gaps = 19/222 (8%)
Query: 86 KQFVVQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDAC 145
++ + + + PD LIL ++ + +G +Q S +A L +PG +V+DAC
Sbjct: 172 EEIAISQQERFPDALILKERANVFMTQAFKDGLFEVQDAGSQTIAPFLQVEPGMRVMDAC 231
Query: 146 SAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205
+ G K +HLAALM+ KG+I+A ++ K ++ LK + +GA NIE D + K
Sbjct: 232 AGAGGKALHLAALMENKGQIIATDIYKSKLNELKRRARRAGAHNIETRLIDSTKVIKK-- 289
Query: 206 AYSEVRAILLDPSCSGSGTAAERLD---HLLPSHASGHTADPTEMERLNKLSAFQKKAL- 261
++ +L+D CSG G D L P E ++++ A Q+ L
Sbjct: 290 LAGKMDRLLIDAPCSGLGVLRRNPDAKWKLQP-------------EFIDEIRATQQDILQ 336
Query: 262 RHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQL 303
R++ +VY+TCSI ENE+ ++ L F+L
Sbjct: 337 RYSTVVKPDGMMVYATCSILASENENQVQEFLKSEAGASFEL 378
>gi|402085166|gb|EJT80064.1| nucleolar protein NOP2 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 715
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/250 (31%), Positives = 118/250 (47%), Gaps = 25/250 (10%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVP-------DLLILPP 104
+ A ++ + P+P +R NTL+ ++ +L + V + L P L I
Sbjct: 299 EAFAFFEANETPRPVVIRTNTLR----TSRRDLAQALVNRGVTLEPVGKWSKVGLQIFDA 354
Query: 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGK 164
L P + G LQ +S + AL P+ G +VLD +APG KT H AALMK G
Sbjct: 355 NVPLGATPEYLGGHYILQAASSFLPVMALCPQEGERVLDMAAAPGGKTTHCAALMKNTGV 414
Query: 165 IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGT 224
I+A + +K R + L I GA N+ V + D + + V LLD CSG+G
Sbjct: 415 IIANDPSKSRAKGLIGNIHRLGAKNVIVSNYDAREIPTLMGGFDRV---LLDAPCSGTGV 471
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGVERVVYSTCSIHQV 283
A+ PS + + TE++ + +L QK+ L A+ S +VYSTCS+
Sbjct: 472 IAKD-----PSVKT----NKTELDFM-QLPHIQKQLLLAAIDSTKSGGYLVYSTCSVTVE 521
Query: 284 ENEDVIKSVL 293
ENE V+ L
Sbjct: 522 ENEQVVNYAL 531
>gi|28210910|ref|NP_781854.1| 16S rRNA M(5)C 967 methyltransferase [Clostridium tetani E88]
gi|28203349|gb|AAO35791.1| 16S rRNA M(5)C 967 methyltransferase [Clostridium tetani E88]
Length = 454
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 133/268 (49%), Gaps = 27/268 (10%)
Query: 31 KGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLEL-GKQFV 89
K I L L Q R K++ I L L P + VRVN +K D +S L +
Sbjct: 162 KWMIDLFLKQY-GREKIEEI--LKGLNSIPSIT----VRVNNIKSDYESVWNSLEDNNYN 214
Query: 90 VQKDDLVPDLLILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPG 149
+++ + P+ + + G + +PL G + +Q +++ +VA A+ + V+D CSAPG
Sbjct: 215 IEEGLVCPEAIRIIKGRAIEKNPLFKEGLITVQDESAMLVAGAMDLEDNMNVMDLCSAPG 274
Query: 150 NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209
KT H++ +M GK++A ++++ ++ +K + G NI+++ GD + K YSE
Sbjct: 275 GKTTHISEIMNNTGKVLAFDIHENKLDLIKQNKERLGVKNIDLILGDGTLYNKK---YSE 331
Query: 210 V-RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF- 267
IL+D CSG G ++ P +A + L + Q+K L + +
Sbjct: 332 FANRILIDAPCSGLGIIRKK-----PEIKYTKSA-----KDLKSIVHIQRKILENGAKYL 381
Query: 268 --PGVERVVYSTCSIHQVENEDVIKSVL 293
G+ ++YSTC++++ EN + +K L
Sbjct: 382 KKNGI--LLYSTCTLNKKENIENVKWFL 407
>gi|210632641|ref|ZP_03297483.1| hypothetical protein COLSTE_01386 [Collinsella stercoris DSM 13279]
gi|210159418|gb|EEA90389.1| NOL1/NOP2/sun family protein [Collinsella stercoris DSM 13279]
Length = 330
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 111/240 (46%), Gaps = 29/240 (12%)
Query: 64 KPRYVRVNTLKMDVDSAVLEL-GKQFVVQKDDLVPDLLILPPGCDLHVHPL-----IVNG 117
+P +R N LK VD +L + V ++ D L++ CD L G
Sbjct: 25 RPVTLRANALKATVDDVCRDLDARDIVYERVPWYDDALVV---CDARERDLWELDIYRKG 81
Query: 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRR 177
++LQ +S + L P+ G +LD C+APG KT +AAL + ACE++ R +
Sbjct: 82 HIYLQSLSSMLPPLLLEPRAGADILDMCAAPGGKTAQIAALTGNAAHLTACEMSAPRAEK 141
Query: 178 LKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHA 237
L + AAN+ V+ D LD + ILLD C+G+GT +
Sbjct: 142 LAYNLDKLDAANVNVMRTDARRLDE----FFSFDQILLDAPCTGTGT-----------YR 186
Query: 238 SGHTADPTEM--ERLNKLSAFQKKALRHALSF--PGVERVVYSTCSIHQVENEDVIKSVL 293
+G M + L K++ Q+ L AL+ PG +VYSTCS+ EN+D +++ L
Sbjct: 187 AGDERAEKRMTPQLLAKVTKSQRALLDRALTVLKPGGT-LVYSTCSVLAEENDDQVRAAL 245
>gi|147921688|ref|YP_684492.1| tRNA/rRNA cytosine-C5-methylase [Methanocella arvoryzae MRE50]
gi|110619888|emb|CAJ35166.1| putative tRNA/rRNA cytosine-C5-methylase (Nop2/Sun family)
[Methanocella arvoryzae MRE50]
Length = 316
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 82/283 (28%), Positives = 123/283 (43%), Gaps = 25/283 (8%)
Query: 40 QLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDL 99
+ +V + + DL ++ + P Y+RVNTLK+ ++ + L + K +PD
Sbjct: 21 EYMVARFARLVPDLEKFLESMEAPPATYIRVNTLKIAPNALLKRLTDKGFTLKPADIPDC 80
Query: 100 LIL---PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLA 156
+ P L+ G ++Q K+S + ALAP PG V+D ++PG KT H+A
Sbjct: 81 FEVTGEPYSIGASAEHLL--GYFYVQDKSSMIPPLALAPNPGDTVIDMAASPGGKTTHIA 138
Query: 157 ALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216
LM +G IVA E R+ L+ I G N + + D L D + ILLD
Sbjct: 139 QLMNNEGLIVAIEKEPGRIPSLRTNIGRCGVMNTAIYNMDALEADKIG---VKADKILLD 195
Query: 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF--PGVERVV 274
C+G G A S AD + S Q + + AL PG +V
Sbjct: 196 APCTGEGVIARDRSR----KTSREEAD------IQFCSTVQHELIDAALKVLKPG-GTLV 244
Query: 275 YSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQF 317
YSTCS ENE +I + +G ++ P P G +F
Sbjct: 245 YSTCSYAPEENELIIDYAV---KKYGLKV-DPVPYGVPGIEKF 283
>gi|448439541|ref|ZP_21588105.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
saccharovorum DSM 1137]
gi|445691075|gb|ELZ43270.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
saccharovorum DSM 1137]
Length = 316
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 112/249 (44%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGC 106
++D A D P P VRVN + V A E G + + D L LP G
Sbjct: 11 VDDADAFRAACDRPLPSVVRVNEMAASPARVREAFDEEGVAY--EPVDWHDGLFRLPDGN 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
P V+G Q + S + AL P+PG +V DAC+APG+KT +A M +G +V
Sbjct: 69 PGGNWPY-VHGWTHGQEEVSVLPGLALDPRPGDRVWDACAAPGSKTTQIADAMDDEGTVV 127
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + N R+ L+ + G N V + D N K A+ E L+D CS GT
Sbjct: 128 ANDNNLGRLSALRHNAERLGITNAIVTNQDARNFSTKPLAFDEFDRALVDAPCSCEGTCR 187
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVE 284
+ D D ++ ++ ++ QK L A+ + PG VVYSTC+ E
Sbjct: 188 KNPD----------VVDQWTLDHVHAVAGIQKGILARAVQATRPG-GTVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V+ VL
Sbjct: 237 NEAVLDHVL 245
>gi|341896868|gb|EGT52803.1| CBN-NOL-1 protein [Caenorhabditis brenneri]
Length = 687
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/275 (28%), Positives = 125/275 (45%), Gaps = 34/275 (12%)
Query: 52 DLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFVVQKDDLVPDLLILPPGCDL 108
+L+ + D P+P +R N+LK+ D+ ++ G D L++ +
Sbjct: 242 ELLEFLEANDNPRPVTIRANSLKVKRRDLAKNLINRGMNVDPAADWTKVGLVVYDSQVPV 301
Query: 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVAC 168
P + G +QG S + ALAP+PG +VLD CSAPG KT H+AALMK G + A
Sbjct: 302 GATPEYLAGHYMIQGLNSLLPVMALAPQPGDRVLDMCSAPGGKTSHIAALMKNSGTLFAN 361
Query: 169 ELNKERVRRLKDTIKLSGAANIEVLH---GDFLNLDPKDPAYSEVRAILLDPSCSGSGTA 225
+ + +R R + + G N V + +F + P + ILLD CSG+G
Sbjct: 362 DASFDRCRAIIGNLHRLGVNNAVVCNLGGEEFAKIRP-----NGFDRILLDAPCSGTGV- 415
Query: 226 AERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-----SFPGVERVVYSTCSI 280
+ + + D +++R + + Q++ + AL + P +VYSTCS+
Sbjct: 416 ------IWKDQSVKTSKDSQDVQRRHTV---QRQLILSALDSLDANSPNGGYLVYSTCSV 466
Query: 281 HQVENEDVIKSVL--------PIAMSFGFQLATPF 307
ENE V+ +L P +S G T F
Sbjct: 467 LVEENEAVVNFLLERRHCELVPTGLSIGVDGYTRF 501
>gi|242398230|ref|YP_002993654.1| TRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family [Thermococcus
sibiricus MM 739]
gi|242264623|gb|ACS89305.1| TRNA/rRNA cytosine-C5-methylase, NOL1/NOP2/Sun family [Thermococcus
sibiricus MM 739]
Length = 310
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 111/234 (47%), Gaps = 16/234 (6%)
Query: 63 PKPRYVRVNTLKMDVDSAVLELGKQ-FVVQKDDLVPDLLILP-PGCDLHVHPLIVNGCVF 120
P PR RVNTL+ ++ + + K+ F ++ + L + P + G ++
Sbjct: 36 PLPRCFRVNTLRTEISTITKIMNKKGFQFKRISWAREGFCLTREPFSITSTPEYLGGLIY 95
Query: 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKD 180
+Q +S AL PKPG + D +APG KT ++A LMK KG I A ++ ++R++ +
Sbjct: 96 IQEASSMYPPVALEPKPGEIIADMAAAPGGKTSYMAQLMKNKGVIYAFDVGRDRLKETRL 155
Query: 181 TIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGH 240
+ G N ++H L + + + ILLD C+GSGT H P +
Sbjct: 156 NLSRLGVTNTILIHKSSLYMGELGIEFDK---ILLDAPCTGSGTI-----HKNPERKADR 207
Query: 241 TADPTEMERLNKLSAFQKKALRHALSFPGVERV-VYSTCSIHQVENEDVIKSVL 293
T +E + Q + ++ AL V V VYSTCS+ ENE VI+ L
Sbjct: 208 T-----IEDVKFCQNLQMQMIKVALENLKVGGVLVYSTCSLEPEENEFVIQWAL 256
>gi|425454955|ref|ZP_18834680.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9807]
gi|389804235|emb|CCI16917.1| Ribosomal RNA small subunit methyltransferase B [Microcystis
aeruginosa PCC 9807]
Length = 446
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 92/306 (30%), Positives = 146/306 (47%), Gaps = 43/306 (14%)
Query: 19 PVGDAEKFLMLHKGAIQLALAQL-LVRNKVKSIEDLMALY-QTPDVPKPRYVRVNTLKMD 76
P A + +LH + L QL L R V E L + ++PD+ +R+N LK
Sbjct: 139 PENTASRLGILH--SFPDWLVQLWLDRFSVTETEQLCQWFNRSPDLD----IRINPLKTS 192
Query: 77 VDSAVLELGKQFVVQKDDLVPDLLILPPGCDL-----HVHPL--IVNGCVFLQGKASSMV 129
++ EL + ++ + L LP C L ++ L G LQ ++ +V
Sbjct: 193 REALENEL------ESANITFNHLKLPLACRLTSGLGNIERLEGFRAGNYTLQDISAQLV 246
Query: 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189
L P+PG ++DAC+APG KT H+A LM +G+I+AC+ R+R+L+ IK
Sbjct: 247 TYLLDPQPGETIIDACAAPGGKTTHIAELMGDRGRILACDQTASRLRQLEANIKRLDLKA 306
Query: 190 IEVLHGDFLNLDPKDPAYSEV-RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEME 248
IE+ GD + P + + +L+D CSG GT H LP T E
Sbjct: 307 IEIHLGDSRD----RPQWCGIADRVLIDAPCSGLGTL-----HKLPDIRWRQTP-----E 352
Query: 249 RLNKLSAFQKKALRHALSF---PGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305
L L+ Q + L A ++ G+ +VY+TC+++ +ENE VI+ L A +++A
Sbjct: 353 NLPVLAKRQGELLASAATWVKPKGI--LVYATCTLNPLENERVIEQFL--AAHPDWKMAP 408
Query: 306 PFPNGT 311
P N +
Sbjct: 409 PDSNSS 414
>gi|452982279|gb|EME82038.1| hypothetical protein MYCFIDRAFT_165230 [Pseudocercospora fijiensis
CIRAD86]
Length = 658
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 86/270 (31%), Positives = 126/270 (46%), Gaps = 36/270 (13%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKM---DVDSAVLELGKQFV-VQKDDLVPDLLILPPGC 106
++ +A + + P+P +R NTL+ D+ A++ G V K V L I
Sbjct: 268 QEALAYFDANETPRPMVIRTNTLRTHRRDLAHALINRGVTLEPVGKWSKV-GLQIFESQV 326
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
L P + G LQ +S + A ALAP+ +VLD +APG KT HLAALM+ G I
Sbjct: 327 PLGATPEYLAGHYILQAASSFLPAMALAPQEHERVLDMAAAPGGKTTHLAALMRNTGVIF 386
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
+ + NK+R + L I G N V + L PK +LLD CSG+G A
Sbjct: 387 SNDSNKDRAKGLIGNIHRLGVKNTVVCNYSALEF-PK--VMGGFDRVLLDAPCSGTGVIA 443
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKK-------ALRHALSFPGVERVVYSTCS 279
+ D + ++ + P + RL L QK+ ++ HA G +VYSTCS
Sbjct: 444 K--DASVKTNKT-----PDDFLRLPHL---QKQLLLAAVDSVDHASKTGGY--IVYSTCS 491
Query: 280 IHQVENEDVIKSVL---------PIAMSFG 300
+ ENE V++ VL P ++FG
Sbjct: 492 VTVEENEQVVQYVLNKRPNVKLVPTGLAFG 521
>gi|325294320|ref|YP_004280834.1| sun protein [Desulfurobacterium thermolithotrophum DSM 11699]
gi|325064768|gb|ADY72775.1| sun protein [Desulfurobacterium thermolithotrophum DSM 11699]
Length = 442
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 72/265 (27%), Positives = 128/265 (48%), Gaps = 27/265 (10%)
Query: 51 EDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGKQFV-VQKDDLVPDLLILPPGCDLH 109
E++ L + + P ++RVNT+K+ + L K + + +P ++ + +
Sbjct: 163 EEIEKLLKGLNRVAPLFIRVNTIKISQQELLNLLEKTKIDAEPHPFIPYMIRIKGRVPIE 222
Query: 110 VHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACE 169
P G ++Q AS + A L PK G +LD +APG KT L++L K +I+A +
Sbjct: 223 SIPGYKEGFFYIQDPASFLSAYLLDPKQGEIILDVGAAPGGKTTALSSLTIDKARIIAVD 282
Query: 170 LNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE-----VRAILLDPSCSGSGT 224
+NKER++ LK+ +K G +N+E++ D KD + E IL+D CS +G
Sbjct: 283 INKERMKLLKNNLKRLGISNVELVLTDI----QKDKNFIEKHENSFDKILIDAPCSATG- 337
Query: 225 AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR--HALSFPGVERVVYSTCSIHQ 282
++ H G ++ + N+ Q+ L + L PG ++YS CS+ +
Sbjct: 338 -------VIRRHPEGKWNKSLKLIKYNQ--TIQRNLLSSCYKLLKPG-GVLLYSVCSLEK 387
Query: 283 VENEDVIKSVLPIAMSFGFQLATPF 307
E ED++K A GF+ ++ +
Sbjct: 388 EEGEDILK----FAQEIGFKESSLY 408
>gi|448436000|ref|ZP_21587016.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
tebenquichense DSM 14210]
gi|445683160|gb|ELZ35563.1| RNA methylase, NOL1/NOP2/sun family protein [Halorubrum
tebenquichense DSM 14210]
Length = 321
Score = 89.7 bits (221), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 79/249 (31%), Positives = 113/249 (45%), Gaps = 19/249 (7%)
Query: 50 IEDLMALYQTPDVPKPRYVRVNTLKMD---VDSAVLELGKQFVVQKDDLVPDLLILPPGC 106
++D+ A D P P VR N + V A E G + + D L LP G
Sbjct: 11 VDDVDAFRAACDRPLPSVVRTNEIAATPARVREAFDEAGVAY--EAVDWHDGLFRLPDGN 68
Query: 107 DLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIV 166
P V+G Q + S + AL P+PG +V DAC+APG+KT +A M +G +V
Sbjct: 69 PGGNWPY-VHGWTHGQEEVSVLPGLALDPRPGERVWDACAAPGSKTTQIADAMGDEGTVV 127
Query: 167 ACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAA 226
A + N R+ L+ + G N V + D N K A+ E L+D CS GT
Sbjct: 128 ANDNNLGRLSALRHNAERLGITNTVVTNQDARNFSLKPLAFDEFDRALVDAPCSCEGTCR 187
Query: 227 ERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL--SFPGVERVVYSTCSIHQVE 284
+ D L D ++ ++ ++ QK L A+ + PG VVYSTC+ E
Sbjct: 188 KNPDVL----------DQWTLDHVHAVAGIQKGVLARAVQATRPG-GVVVYSTCTFAPEE 236
Query: 285 NEDVIKSVL 293
NE V+ VL
Sbjct: 237 NEAVLDHVL 245
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.320 0.136 0.402
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,257,574,003
Number of Sequences: 23463169
Number of extensions: 211143109
Number of successful extensions: 553102
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5894
Number of HSP's successfully gapped in prelim test: 2196
Number of HSP's that attempted gapping in prelim test: 534769
Number of HSP's gapped (non-prelim): 9186
length of query: 337
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 194
effective length of database: 9,003,962,200
effective search space: 1746768666800
effective search space used: 1746768666800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)