Query 019692
Match_columns 337
No_of_seqs 345 out of 2902
Neff 8.0
Searched_HMMs 29240
Date Mon Mar 25 05:40:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019692.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019692hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2b9e_A NOL1/NOP2/SUN domain fa 100.0 3.5E-54 1.2E-58 404.5 26.6 266 62-337 8-295 (309)
2 3m6w_A RRNA methylase; rRNA me 100.0 5.7E-52 1.9E-56 407.6 22.9 282 30-337 2-294 (464)
3 1ixk_A Methyltransferase; open 100.0 2.1E-50 7.3E-55 380.2 25.4 286 27-337 13-309 (315)
4 2frx_A Hypothetical protein YE 100.0 2.3E-50 7.8E-55 399.1 24.1 290 28-337 6-305 (479)
5 3m4x_A NOL1/NOP2/SUN family pr 100.0 5.7E-51 2E-55 399.9 17.1 279 27-337 5-297 (456)
6 2yxl_A PH0851 protein, 450AA l 100.0 2.2E-48 7.6E-53 383.2 26.1 287 27-337 154-443 (450)
7 1sqg_A SUN protein, FMU protei 100.0 1.1E-46 3.8E-51 369.0 25.2 277 30-337 145-423 (429)
8 4fzv_A Putative methyltransfer 100.0 1.6E-45 5.6E-50 350.8 18.1 239 38-295 23-302 (359)
9 3ajd_A Putative methyltransfer 100.0 1.3E-44 4.5E-49 334.1 18.0 256 62-337 7-268 (274)
10 4dmg_A Putative uncharacterize 99.8 1.5E-18 5.1E-23 167.5 10.6 162 111-304 190-354 (393)
11 3id6_C Fibrillarin-like rRNA/T 99.7 1.1E-17 3.7E-22 150.2 13.4 131 135-305 74-212 (232)
12 1wxx_A TT1595, hypothetical pr 99.7 1E-17 3.6E-22 161.1 8.1 163 111-304 187-353 (382)
13 2as0_A Hypothetical protein PH 99.7 4.9E-17 1.7E-21 157.1 9.8 155 112-293 194-353 (396)
14 3v97_A Ribosomal RNA large sub 99.7 7.9E-17 2.7E-21 166.1 8.6 153 111-291 516-671 (703)
15 3c0k_A UPF0064 protein YCCW; P 99.7 3.6E-17 1.2E-21 158.1 4.9 165 111-304 197-367 (396)
16 2igt_A SAM dependent methyltra 99.6 1E-16 3.5E-21 151.4 6.7 167 111-304 126-299 (332)
17 3lpm_A Putative methyltransfer 99.6 1.5E-15 5.2E-20 138.0 12.9 165 115-304 19-196 (259)
18 2b78_A Hypothetical protein SM 99.6 4.2E-16 1.4E-20 150.1 6.8 155 112-293 189-349 (385)
19 1yb2_A Hypothetical protein TA 99.6 2.6E-16 9E-21 144.4 5.1 177 61-280 33-214 (275)
20 3tma_A Methyltransferase; thum 99.6 1.4E-14 4.9E-19 137.6 16.7 143 126-305 192-335 (354)
21 1i1n_A Protein-L-isoaspartate 99.6 1.9E-14 6.3E-19 127.6 13.8 129 118-287 55-192 (226)
22 3eey_A Putative rRNA methylase 99.6 3.6E-14 1.2E-18 123.0 14.1 147 134-305 19-169 (197)
23 4df3_A Fibrillarin-like rRNA/T 99.6 7.4E-15 2.5E-19 131.6 9.7 115 126-276 60-181 (233)
24 2frn_A Hypothetical protein PH 99.6 5.1E-15 1.8E-19 136.2 8.8 133 124-303 114-251 (278)
25 3tfw_A Putative O-methyltransf 99.6 1.4E-14 4.9E-19 130.9 10.8 149 121-304 47-206 (248)
26 2b3t_A Protein methyltransfera 99.5 5.2E-14 1.8E-18 129.0 14.4 155 117-294 87-251 (276)
27 3axs_A Probable N(2),N(2)-dime 99.5 4.3E-15 1.5E-19 142.8 7.3 124 121-282 31-162 (392)
28 3e05_A Precorrin-6Y C5,15-meth 99.5 1.2E-13 4.1E-18 120.5 15.7 136 116-294 20-156 (204)
29 3a27_A TYW2, uncharacterized p 99.5 1.4E-14 4.8E-19 132.9 9.8 114 131-285 113-226 (272)
30 2dul_A N(2),N(2)-dimethylguano 99.5 3.8E-15 1.3E-19 143.0 5.5 122 122-282 32-168 (378)
31 2qm3_A Predicted methyltransfe 99.5 1.1E-13 3.9E-18 132.5 15.5 143 112-293 146-295 (373)
32 3mti_A RRNA methylase; SAM-dep 99.5 4.7E-14 1.6E-18 120.9 11.1 142 134-304 19-164 (185)
33 3bt7_A TRNA (uracil-5-)-methyl 99.5 3.2E-14 1.1E-18 136.1 11.1 87 132-222 209-308 (369)
34 3njr_A Precorrin-6Y methylase; 99.5 2E-13 6.7E-18 119.8 15.3 129 120-294 38-168 (204)
35 3evz_A Methyltransferase; NYSG 99.5 3E-13 1E-17 120.0 14.6 147 134-304 52-201 (230)
36 3u81_A Catechol O-methyltransf 99.5 8.2E-14 2.8E-18 123.4 10.1 148 119-304 40-192 (221)
37 3k6r_A Putative transferase PH 99.5 4.1E-14 1.4E-18 130.1 8.4 81 135-221 123-204 (278)
38 1uwv_A 23S rRNA (uracil-5-)-me 99.5 3.1E-13 1.1E-17 132.0 13.3 89 131-222 280-369 (433)
39 3duw_A OMT, O-methyltransferas 99.5 8E-14 2.7E-18 123.2 7.9 147 122-303 43-202 (223)
40 3mb5_A SAM-dependent methyltra 99.5 3E-13 1E-17 121.9 11.3 94 121-218 77-171 (255)
41 2gpy_A O-methyltransferase; st 99.5 1.1E-13 3.7E-18 123.3 8.1 130 115-280 32-163 (233)
42 2pwy_A TRNA (adenine-N(1)-)-me 99.4 3.5E-13 1.2E-17 121.3 11.4 91 125-218 84-175 (258)
43 1wy7_A Hypothetical protein PH 99.4 8E-13 2.7E-17 115.3 12.9 124 134-303 46-169 (207)
44 2ift_A Putative methylase HI07 99.4 2.8E-13 9.5E-18 118.5 9.8 80 137-219 53-135 (201)
45 1o54_A SAM-dependent O-methylt 99.4 5E-13 1.7E-17 122.4 11.9 90 126-219 101-191 (277)
46 2jjq_A Uncharacterized RNA met 99.4 8E-13 2.8E-17 128.6 13.2 79 135-222 288-366 (425)
47 3p9n_A Possible methyltransfer 99.4 5.6E-13 1.9E-17 114.9 10.5 82 136-220 43-124 (189)
48 3dr5_A Putative O-methyltransf 99.4 2.7E-13 9.1E-18 120.6 8.5 124 121-280 37-166 (221)
49 3tm4_A TRNA (guanine N2-)-meth 99.4 5.7E-13 2E-17 127.6 11.3 155 112-305 187-348 (373)
50 2yx1_A Hypothetical protein MJ 99.4 3.4E-13 1.2E-17 127.4 8.9 100 136-281 194-295 (336)
51 1nv8_A HEMK protein; class I a 99.4 6.4E-13 2.2E-17 122.6 9.8 99 119-224 102-207 (284)
52 1nt2_A Fibrillarin-like PRE-rR 99.4 2.5E-12 8.5E-17 113.4 12.5 82 133-217 53-134 (210)
53 3ntv_A MW1564 protein; rossman 99.4 5.7E-13 1.9E-17 119.0 8.1 122 117-276 51-175 (232)
54 2fpo_A Methylase YHHF; structu 99.4 8.2E-13 2.8E-17 115.5 8.9 79 137-219 54-132 (202)
55 3r3h_A O-methyltransferase, SA 99.4 4.5E-14 1.5E-18 127.3 0.7 152 118-304 41-206 (242)
56 3dou_A Ribosomal RNA large sub 99.4 8.9E-13 3E-17 114.6 8.5 122 135-294 23-153 (191)
57 2ozv_A Hypothetical protein AT 99.4 1.1E-12 3.8E-17 119.3 9.5 135 124-275 23-168 (260)
58 3c3p_A Methyltransferase; NP_9 99.4 4.5E-13 1.5E-17 117.5 6.4 123 120-280 39-163 (210)
59 3c3y_A Pfomt, O-methyltransfer 99.4 5.2E-13 1.8E-17 119.8 6.8 127 120-281 53-185 (237)
60 1i9g_A Hypothetical protein RV 99.4 2.7E-12 9.3E-17 117.2 11.0 95 121-218 83-180 (280)
61 2h1r_A Dimethyladenosine trans 99.4 6.6E-13 2.2E-17 123.5 6.9 96 119-222 24-119 (299)
62 3lbf_A Protein-L-isoaspartate 99.4 5E-12 1.7E-16 110.4 11.9 97 116-218 56-152 (210)
63 1xdz_A Methyltransferase GIDB; 99.3 5.1E-12 1.7E-16 113.2 11.9 130 134-304 67-197 (240)
64 4dzr_A Protein-(glutamine-N5) 99.3 1.5E-13 5.1E-18 119.7 1.7 148 136-294 29-178 (215)
65 3dh0_A SAM dependent methyltra 99.3 1.1E-11 3.7E-16 108.8 13.6 141 127-305 27-177 (219)
66 3gdh_A Trimethylguanosine synt 99.3 7.9E-13 2.7E-17 118.2 6.2 94 125-225 66-160 (241)
67 3hm2_A Precorrin-6Y C5,15-meth 99.3 8.2E-12 2.8E-16 105.7 12.1 125 127-294 15-141 (178)
68 1dus_A MJ0882; hypothetical pr 99.3 1.3E-11 4.5E-16 105.4 13.4 119 124-280 39-160 (194)
69 3tr6_A O-methyltransferase; ce 99.3 6.5E-13 2.2E-17 117.4 5.0 126 119-279 46-176 (225)
70 1yzh_A TRNA (guanine-N(7)-)-me 99.3 2.4E-11 8.1E-16 106.8 14.9 116 136-277 40-156 (214)
71 4dcm_A Ribosomal RNA large sub 99.3 7.5E-12 2.6E-16 119.9 12.6 137 123-293 208-348 (375)
72 1sui_A Caffeoyl-COA O-methyltr 99.3 1.9E-12 6.6E-17 116.9 7.9 124 119-277 61-190 (247)
73 1m6y_A S-adenosyl-methyltransf 99.3 1.6E-12 5.5E-17 120.8 7.5 92 128-221 17-110 (301)
74 3kr9_A SAM-dependent methyltra 99.3 2.2E-11 7.5E-16 108.4 14.2 124 135-304 13-138 (225)
75 2yxd_A Probable cobalt-precorr 99.3 1.1E-11 3.7E-16 105.1 11.8 117 120-280 18-134 (183)
76 2esr_A Methyltransferase; stru 99.3 4.3E-12 1.5E-16 107.8 9.1 86 130-219 23-110 (177)
77 3g89_A Ribosomal RNA small sub 99.3 5.5E-12 1.9E-16 114.1 10.1 116 135-287 78-194 (249)
78 3fpf_A Mtnas, putative unchara 99.3 1.6E-11 5.4E-16 113.5 13.1 106 131-277 116-222 (298)
79 3kkz_A Uncharacterized protein 99.3 1.3E-11 4.5E-16 112.0 12.4 113 135-285 44-158 (267)
80 1xxl_A YCGJ protein; structura 99.3 1.2E-11 4E-16 110.6 11.8 121 121-279 5-126 (239)
81 3dmg_A Probable ribosomal RNA 99.3 1.7E-11 5.8E-16 117.7 13.6 122 136-293 232-354 (381)
82 1nkv_A Hypothetical protein YJ 99.3 2.7E-11 9.2E-16 108.8 14.2 115 127-279 26-142 (256)
83 3grz_A L11 mtase, ribosomal pr 99.3 1.7E-11 5.7E-16 106.8 12.1 132 126-305 47-181 (205)
84 2ipx_A RRNA 2'-O-methyltransfe 99.3 8.1E-12 2.8E-16 111.2 10.2 84 133-218 73-156 (233)
85 3f4k_A Putative methyltransfer 99.3 2.3E-11 7.9E-16 109.3 13.1 112 134-283 43-156 (257)
86 3lec_A NADB-rossmann superfami 99.3 3.4E-11 1.2E-15 107.4 13.9 126 134-305 18-145 (230)
87 1vl5_A Unknown conserved prote 99.3 1.7E-11 5.6E-16 110.8 11.9 100 111-216 11-110 (260)
88 3cbg_A O-methyltransferase; cy 99.3 3E-12 1E-16 114.4 6.7 148 121-303 56-217 (232)
89 2fca_A TRNA (guanine-N(7)-)-me 99.3 3.6E-11 1.2E-15 106.0 13.3 116 136-277 37-153 (213)
90 3dxy_A TRNA (guanine-N(7)-)-me 99.3 1.5E-11 5.1E-16 109.0 10.7 81 136-218 33-114 (218)
91 2fhp_A Methylase, putative; al 99.3 1.5E-11 5.2E-16 104.9 10.2 82 135-218 42-125 (187)
92 1g8a_A Fibrillarin-like PRE-rR 99.3 2.1E-11 7.3E-16 107.9 11.4 82 135-218 71-152 (227)
93 2f8l_A Hypothetical protein LM 99.3 7.4E-12 2.5E-16 118.4 8.8 158 117-293 106-273 (344)
94 3gnl_A Uncharacterized protein 99.3 4.3E-11 1.5E-15 107.6 13.1 124 134-303 18-143 (244)
95 3vc1_A Geranyl diphosphate 2-C 99.3 3.7E-11 1.3E-15 111.7 13.1 116 127-280 106-224 (312)
96 1inl_A Spermidine synthase; be 99.3 7.4E-12 2.5E-16 116.2 8.2 127 137-293 90-223 (296)
97 1l3i_A Precorrin-6Y methyltran 99.3 2.5E-11 8.5E-16 103.5 10.4 118 121-279 17-136 (192)
98 2pbf_A Protein-L-isoaspartate 99.3 2E-11 6.7E-16 108.0 10.1 91 127-220 68-173 (227)
99 4gek_A TRNA (CMO5U34)-methyltr 99.3 9.1E-12 3.1E-16 113.5 8.1 122 121-279 56-180 (261)
100 2yxe_A Protein-L-isoaspartate 99.2 4.2E-11 1.4E-15 104.8 12.0 99 117-218 57-155 (215)
101 2bm8_A Cephalosporin hydroxyla 99.2 6.9E-12 2.4E-16 112.5 7.0 147 117-306 60-216 (236)
102 2b25_A Hypothetical protein; s 99.2 4.1E-11 1.4E-15 112.8 12.4 97 121-218 89-196 (336)
103 2yvl_A TRMI protein, hypotheti 99.2 8.6E-11 2.9E-15 105.0 13.8 89 124-218 78-167 (248)
104 2okc_A Type I restriction enzy 99.2 1.3E-11 4.3E-16 120.9 8.5 142 116-279 150-309 (445)
105 2avd_A Catechol-O-methyltransf 99.2 3.4E-12 1.2E-16 113.0 4.0 125 120-279 52-181 (229)
106 1fbn_A MJ fibrillarin homologu 99.2 4.1E-11 1.4E-15 106.5 10.9 79 133-218 70-152 (230)
107 1jg1_A PIMT;, protein-L-isoasp 99.2 4.7E-11 1.6E-15 106.5 10.9 99 115-218 69-167 (235)
108 1ws6_A Methyltransferase; stru 99.2 1.3E-11 4.4E-16 103.7 6.9 80 137-220 41-121 (171)
109 1dl5_A Protein-L-isoaspartate 99.2 7.3E-11 2.5E-15 110.3 12.4 96 122-220 60-155 (317)
110 1o9g_A RRNA methyltransferase; 99.2 1.5E-11 5.3E-16 110.6 7.4 121 136-279 50-216 (250)
111 1r18_A Protein-L-isoaspartate( 99.2 3.6E-11 1.2E-15 106.6 9.6 100 117-219 62-173 (227)
112 2plw_A Ribosomal RNA methyltra 99.2 1.2E-10 4.2E-15 100.7 12.7 124 135-293 20-167 (201)
113 2ar0_A M.ecoki, type I restric 99.2 2E-11 7E-16 122.2 8.0 144 115-278 147-313 (541)
114 2vdv_E TRNA (guanine-N(7)-)-me 99.2 1.1E-10 3.7E-15 105.0 12.0 84 135-219 47-138 (246)
115 2h00_A Methyltransferase 10 do 99.2 1.2E-10 4E-15 104.9 12.2 86 137-223 65-154 (254)
116 2ih2_A Modification methylase 99.2 5.7E-11 1.9E-15 114.8 10.0 153 115-293 17-182 (421)
117 3hem_A Cyclopropane-fatty-acyl 99.2 2E-10 6.9E-15 106.1 13.2 124 128-282 63-188 (302)
118 2hnk_A SAM-dependent O-methylt 99.2 1.3E-11 4.3E-16 110.5 4.7 125 121-280 44-184 (239)
119 3bus_A REBM, methyltransferase 99.2 3.3E-10 1.1E-14 102.7 14.2 116 127-279 51-168 (273)
120 1vbf_A 231AA long hypothetical 99.2 1.1E-10 3.7E-15 103.4 10.7 96 116-219 49-144 (231)
121 2xvm_A Tellurite resistance pr 99.2 2.2E-10 7.6E-15 98.4 12.3 85 127-218 22-106 (199)
122 3ldu_A Putative methylase; str 99.2 4.7E-10 1.6E-14 107.8 15.7 106 110-219 162-311 (385)
123 3dlc_A Putative S-adenosyl-L-m 99.2 2.1E-10 7.3E-15 99.8 11.7 112 128-277 35-148 (219)
124 1jsx_A Glucose-inhibited divis 99.1 3.3E-10 1.1E-14 98.4 12.6 119 137-305 65-184 (207)
125 1ej0_A FTSJ; methyltransferase 99.1 9.4E-11 3.2E-15 98.3 8.6 121 135-293 20-149 (180)
126 3uwp_A Histone-lysine N-methyl 99.1 1.4E-10 4.9E-15 111.2 10.8 90 128-219 164-262 (438)
127 2pjd_A Ribosomal RNA small sub 99.1 3.1E-10 1.1E-14 107.2 13.0 135 123-293 182-317 (343)
128 3ldg_A Putative uncharacterize 99.1 5.1E-10 1.8E-14 107.4 14.6 106 110-219 161-310 (384)
129 3jwh_A HEN1; methyltransferase 99.1 4.9E-10 1.7E-14 98.3 13.1 117 128-278 20-142 (217)
130 3orh_A Guanidinoacetate N-meth 99.1 5.9E-11 2E-15 106.2 7.1 130 115-276 36-169 (236)
131 3k0b_A Predicted N6-adenine-sp 99.1 1.2E-09 4.1E-14 105.2 16.5 105 111-219 169-317 (393)
132 3ckk_A TRNA (guanine-N(7)-)-me 99.1 1.7E-10 5.8E-15 103.4 9.8 138 135-304 44-190 (235)
133 3gu3_A Methyltransferase; alph 99.1 1.6E-10 5.5E-15 106.0 9.5 117 126-279 11-128 (284)
134 1pjz_A Thiopurine S-methyltran 99.1 1.1E-10 3.6E-15 102.1 7.6 133 133-304 18-171 (203)
135 3p2e_A 16S rRNA methylase; met 99.1 9.3E-11 3.2E-15 104.4 7.2 111 135-275 22-137 (225)
136 1zq9_A Probable dimethyladenos 99.1 3.4E-10 1.2E-14 104.3 10.8 96 119-222 10-106 (285)
137 3gru_A Dimethyladenosine trans 99.1 3.3E-10 1.1E-14 104.9 10.7 94 119-220 32-125 (295)
138 3mgg_A Methyltransferase; NYSG 99.1 5.4E-10 1.9E-14 101.5 11.8 83 131-217 31-113 (276)
139 1ne2_A Hypothetical protein TA 99.1 5.4E-10 1.8E-14 96.8 11.2 73 134-219 48-120 (200)
140 1zx0_A Guanidinoacetate N-meth 99.1 9.9E-11 3.4E-15 104.3 6.7 130 117-279 38-172 (236)
141 2o57_A Putative sarcosine dime 99.1 7.1E-10 2.4E-14 101.9 12.5 115 127-278 68-188 (297)
142 3ll7_A Putative methyltransfer 99.1 8.4E-11 2.9E-15 113.4 6.5 83 136-222 92-176 (410)
143 3jwg_A HEN1, methyltransferase 99.1 4E-10 1.4E-14 98.8 10.4 85 128-216 20-109 (219)
144 3m70_A Tellurite resistance pr 99.1 3.6E-10 1.2E-14 103.4 10.4 80 131-218 114-193 (286)
145 2nyu_A Putative ribosomal RNA 99.1 7.6E-10 2.6E-14 95.2 11.6 113 135-279 20-147 (196)
146 3q87_B N6 adenine specific DNA 99.1 2.3E-10 7.8E-15 97.1 7.9 81 123-220 7-89 (170)
147 2fyt_A Protein arginine N-meth 99.1 2.9E-10 9.8E-15 107.4 9.3 81 132-218 59-140 (340)
148 2nxc_A L11 mtase, ribosomal pr 99.1 3.6E-10 1.2E-14 102.2 9.6 122 135-305 118-240 (254)
149 3ofk_A Nodulation protein S; N 99.1 4.6E-10 1.6E-14 98.2 9.8 132 125-294 39-177 (216)
150 3dtn_A Putative methyltransfer 99.1 3.5E-10 1.2E-14 100.2 9.1 110 135-281 42-152 (234)
151 1ve3_A Hypothetical protein PH 99.1 4.8E-10 1.6E-14 98.5 9.8 107 136-279 37-144 (227)
152 3lkd_A Type I restriction-modi 99.1 1.5E-09 5.1E-14 108.6 14.0 108 115-222 195-310 (542)
153 4fsd_A Arsenic methyltransfera 99.1 5.7E-10 2E-14 106.9 10.6 108 135-277 81-203 (383)
154 2y1w_A Histone-arginine methyl 99.0 5.3E-10 1.8E-14 105.9 10.1 114 131-281 44-159 (348)
155 2kw5_A SLR1183 protein; struct 99.0 1.7E-09 5.9E-14 93.4 12.6 106 135-280 28-134 (202)
156 3bkx_A SAM-dependent methyltra 99.0 8.5E-10 2.9E-14 100.1 11.1 92 124-218 30-131 (275)
157 3q7e_A Protein arginine N-meth 99.0 4.3E-10 1.5E-14 106.6 9.4 112 135-281 64-177 (349)
158 2fk8_A Methoxy mycolic acid sy 99.0 1.1E-09 3.9E-14 101.7 12.1 117 128-282 81-199 (318)
159 3mq2_A 16S rRNA methyltransfer 99.0 2.4E-10 8.2E-15 100.3 6.8 114 131-276 21-139 (218)
160 3ocj_A Putative exported prote 99.0 2.1E-10 7.2E-15 106.3 6.6 113 134-279 115-229 (305)
161 2r6z_A UPF0341 protein in RSP 99.0 4.3E-11 1.5E-15 108.9 1.8 91 126-220 72-172 (258)
162 1kpg_A CFA synthase;, cyclopro 99.0 1.8E-09 6.1E-14 98.7 12.5 114 129-280 56-171 (287)
163 3adn_A Spermidine synthase; am 99.0 4.9E-10 1.7E-14 103.8 8.6 113 136-279 82-200 (294)
164 2oyr_A UPF0341 protein YHIQ; a 99.0 3.7E-10 1.3E-14 102.6 7.6 91 125-220 74-175 (258)
165 1g6q_1 HnRNP arginine N-methyl 99.0 6.2E-10 2.1E-14 104.6 9.2 82 133-220 34-116 (328)
166 2p35_A Trans-aconitate 2-methy 99.0 1.8E-09 6.1E-14 96.8 11.9 116 122-279 18-134 (259)
167 3ujc_A Phosphoethanolamine N-m 99.0 7.9E-10 2.7E-14 99.4 9.5 113 130-279 48-161 (266)
168 3bzb_A Uncharacterized protein 99.0 6.2E-10 2.1E-14 102.2 9.0 82 135-218 77-173 (281)
169 3htx_A HEN1; HEN1, small RNA m 99.0 1.9E-09 6.5E-14 110.9 13.3 117 130-279 714-836 (950)
170 1u2z_A Histone-lysine N-methyl 99.0 3.2E-09 1.1E-13 103.1 14.4 89 129-218 234-332 (433)
171 3sm3_A SAM-dependent methyltra 99.0 2.4E-09 8.3E-14 94.2 12.4 109 136-279 29-143 (235)
172 2pxx_A Uncharacterized protein 99.0 1.2E-09 4.2E-14 94.8 10.3 130 135-293 40-170 (215)
173 3g5t_A Trans-aconitate 3-methy 99.0 1.5E-09 5.1E-14 100.1 11.1 82 135-216 34-120 (299)
174 3r0q_C Probable protein argini 99.0 6.2E-10 2.1E-14 106.5 8.7 79 133-218 59-138 (376)
175 2p41_A Type II methyltransfera 99.0 2.5E-10 8.5E-15 106.3 5.3 104 135-275 80-189 (305)
176 4htf_A S-adenosylmethionine-de 99.0 1.3E-09 4.4E-14 99.6 9.8 105 137-278 68-174 (285)
177 3cgg_A SAM-dependent methyltra 99.0 2.6E-09 8.9E-14 91.0 11.1 133 135-311 44-177 (195)
178 1ri5_A MRNA capping enzyme; me 99.0 3E-09 1E-13 97.3 12.1 113 135-279 62-176 (298)
179 3ou2_A SAM-dependent methyltra 99.0 3.7E-09 1.3E-13 92.0 12.1 112 128-280 37-149 (218)
180 2gb4_A Thiopurine S-methyltran 99.0 1.7E-09 6E-14 97.8 10.3 77 134-215 65-158 (252)
181 3tqs_A Ribosomal RNA small sub 99.0 1.4E-09 4.7E-14 98.7 8.9 89 125-219 17-106 (255)
182 3g5l_A Putative S-adenosylmeth 99.0 2.3E-09 8E-14 96.0 9.9 109 130-278 37-146 (253)
183 1mjf_A Spermidine synthase; sp 98.9 5.1E-10 1.7E-14 102.9 5.3 111 136-280 74-196 (281)
184 3hnr_A Probable methyltransfer 98.9 2E-09 6.7E-14 94.3 8.8 107 133-280 41-148 (220)
185 2p8j_A S-adenosylmethionine-de 98.9 3.2E-09 1.1E-13 92.0 10.1 111 134-280 20-131 (209)
186 3lcc_A Putative methyl chlorid 98.9 2.3E-09 7.8E-14 95.1 9.1 128 138-305 67-203 (235)
187 2yqz_A Hypothetical protein TT 98.9 3.2E-09 1.1E-13 95.3 10.2 76 134-216 36-111 (263)
188 4hc4_A Protein arginine N-meth 98.9 1.3E-09 4.4E-14 104.2 7.6 76 136-218 82-158 (376)
189 3iv6_A Putative Zn-dependent a 98.9 1.8E-09 6.2E-14 98.2 8.2 83 127-218 35-119 (261)
190 2ex4_A Adrenal gland protein A 98.9 1.5E-09 5.1E-14 96.8 7.5 130 137-304 79-220 (241)
191 1wzn_A SAM-dependent methyltra 98.9 7.2E-09 2.5E-13 92.7 12.0 75 134-216 38-112 (252)
192 3g07_A 7SK snRNA methylphospha 98.9 4.6E-09 1.6E-13 96.8 11.0 49 137-186 46-94 (292)
193 3b3j_A Histone-arginine methyl 98.9 3.1E-09 1E-13 104.9 10.2 79 133-218 154-233 (480)
194 3g2m_A PCZA361.24; SAM-depende 98.9 3.1E-09 1.1E-13 97.9 9.6 116 129-281 75-194 (299)
195 3h2b_A SAM-dependent methyltra 98.9 4.8E-09 1.6E-13 90.7 10.2 124 138-305 42-178 (203)
196 3e23_A Uncharacterized protein 98.9 4.6E-09 1.6E-13 91.5 10.1 125 134-304 40-177 (211)
197 3v97_A Ribosomal RNA large sub 98.9 9.5E-09 3.3E-13 105.9 14.0 109 110-219 157-313 (703)
198 3bkw_A MLL3908 protein, S-aden 98.9 3.8E-09 1.3E-13 93.6 9.5 110 128-277 34-144 (243)
199 1qam_A ERMC' methyltransferase 98.9 3.8E-09 1.3E-13 95.0 9.2 93 119-219 12-104 (244)
200 1iy9_A Spermidine synthase; ro 98.9 2.9E-09 1E-13 97.5 8.5 112 137-279 75-191 (275)
201 3ege_A Putative methyltransfer 98.9 2.8E-09 9.5E-14 96.4 8.2 110 126-279 23-132 (261)
202 3khk_A Type I restriction-modi 98.9 2.2E-09 7.6E-14 107.4 8.3 105 115-222 223-342 (544)
203 3ccf_A Cyclopropane-fatty-acyl 98.9 4.1E-09 1.4E-13 96.0 9.2 108 128-279 48-156 (279)
204 3l8d_A Methyltransferase; stru 98.9 6E-09 2E-13 92.4 9.9 104 135-279 51-155 (242)
205 3thr_A Glycine N-methyltransfe 98.9 5.5E-09 1.9E-13 95.6 9.7 123 127-279 47-177 (293)
206 1xtp_A LMAJ004091AAA; SGPP, st 98.9 7.9E-09 2.7E-13 92.3 10.5 111 131-278 87-198 (254)
207 2pt6_A Spermidine synthase; tr 98.9 2.3E-09 7.9E-14 100.4 7.1 113 136-279 115-232 (321)
208 3i9f_A Putative type 11 methyl 98.9 5.5E-09 1.9E-13 87.7 8.7 123 132-305 12-144 (170)
209 3d2l_A SAM-dependent methyltra 98.9 9.4E-09 3.2E-13 91.1 10.4 73 136-217 32-104 (243)
210 2o07_A Spermidine synthase; st 98.9 2.6E-09 8.7E-14 99.4 6.9 114 135-279 93-211 (304)
211 1y8c_A S-adenosylmethionine-de 98.9 6.9E-09 2.4E-13 91.9 9.3 105 137-277 37-142 (246)
212 3fut_A Dimethyladenosine trans 98.9 4.1E-09 1.4E-13 96.4 7.8 90 122-220 32-121 (271)
213 1yub_A Ermam, rRNA methyltrans 98.8 3.6E-10 1.2E-14 101.6 0.4 96 119-222 11-106 (245)
214 1wg8_A Predicted S-adenosylmet 98.8 2.8E-09 9.5E-14 97.2 5.9 86 129-221 14-101 (285)
215 1xj5_A Spermidine synthase 1; 98.8 4.8E-09 1.6E-13 98.8 7.6 116 135-280 118-238 (334)
216 2i7c_A Spermidine synthase; tr 98.8 3.9E-09 1.3E-13 97.1 6.7 115 135-280 76-195 (283)
217 4hg2_A Methyltransferase type 98.8 3.9E-09 1.3E-13 95.8 6.5 112 137-293 39-153 (257)
218 3fzg_A 16S rRNA methylase; met 98.8 5.7E-09 2E-13 90.1 6.8 73 136-215 48-121 (200)
219 2vdw_A Vaccinia virus capping 98.8 1.4E-08 4.7E-13 94.3 9.9 111 137-279 48-171 (302)
220 3uzu_A Ribosomal RNA small sub 98.8 1.1E-08 3.8E-13 93.9 9.2 92 124-219 29-124 (279)
221 3ftd_A Dimethyladenosine trans 98.8 9.1E-09 3.1E-13 92.9 8.4 94 119-220 13-106 (249)
222 2p7i_A Hypothetical protein; p 98.8 9.1E-09 3.1E-13 91.1 8.3 101 135-278 40-142 (250)
223 3e8s_A Putative SAM dependent 98.8 1.4E-08 4.9E-13 88.6 9.4 103 132-278 47-153 (227)
224 2xyq_A Putative 2'-O-methyl tr 98.8 7.1E-09 2.4E-13 95.7 7.7 105 133-277 59-171 (290)
225 1uir_A Polyamine aminopropyltr 98.8 6.1E-09 2.1E-13 97.2 7.4 116 136-279 76-197 (314)
226 3bwc_A Spermidine synthase; SA 98.8 7E-09 2.4E-13 96.4 6.7 115 135-279 93-212 (304)
227 3bgv_A MRNA CAP guanine-N7 met 98.8 3.6E-08 1.2E-12 91.4 11.4 114 136-279 33-157 (313)
228 2qfm_A Spermine synthase; sper 98.8 4.5E-09 1.5E-13 99.4 5.2 133 137-293 188-330 (364)
229 2gs9_A Hypothetical protein TT 98.8 1.9E-08 6.5E-13 87.4 8.7 98 137-279 36-134 (211)
230 2wa2_A Non-structural protein 98.8 2.9E-09 9.8E-14 97.7 3.4 73 135-218 80-157 (276)
231 3s1s_A Restriction endonucleas 98.8 1.3E-08 4.6E-13 104.4 8.5 159 116-293 294-484 (878)
232 2b2c_A Spermidine synthase; be 98.7 6.4E-09 2.2E-13 97.1 5.5 114 136-280 107-225 (314)
233 2oxt_A Nucleoside-2'-O-methylt 98.7 3.5E-09 1.2E-13 96.6 3.3 74 134-218 71-149 (265)
234 3bxo_A N,N-dimethyltransferase 98.7 3.3E-08 1.1E-12 87.3 9.5 105 136-280 39-144 (239)
235 1x19_A CRTF-related protein; m 98.7 1.9E-07 6.6E-12 88.2 15.3 115 128-279 181-297 (359)
236 3tka_A Ribosomal RNA small sub 98.7 5.5E-09 1.9E-13 97.4 4.2 89 129-221 49-140 (347)
237 3ggd_A SAM-dependent methyltra 98.7 3.6E-08 1.2E-12 87.8 9.0 110 134-279 53-165 (245)
238 3m33_A Uncharacterized protein 98.7 5.1E-08 1.7E-12 86.1 9.6 72 135-216 46-118 (226)
239 2avn_A Ubiquinone/menaquinone 98.7 3.5E-08 1.2E-12 88.9 8.6 100 137-279 54-154 (260)
240 3pfg_A N-methyltransferase; N, 98.7 2.6E-08 8.8E-13 89.8 7.7 70 136-217 49-118 (263)
241 3gjy_A Spermidine synthase; AP 98.7 2.5E-08 8.7E-13 92.9 7.4 111 139-279 91-202 (317)
242 2cmg_A Spermidine synthase; tr 98.7 3.3E-08 1.1E-12 89.9 7.9 99 136-280 71-174 (262)
243 3ufb_A Type I restriction-modi 98.7 5E-08 1.7E-12 97.4 9.7 108 115-222 195-315 (530)
244 3dli_A Methyltransferase; PSI- 98.7 3.1E-08 1.1E-12 88.1 7.3 103 135-279 39-142 (240)
245 1qzz_A RDMB, aclacinomycin-10- 98.7 1.7E-07 5.7E-12 88.9 12.4 113 129-278 174-288 (374)
246 2r3s_A Uncharacterized protein 98.7 2.1E-07 7.2E-12 86.7 12.8 115 130-280 156-274 (335)
247 1p91_A Ribosomal RNA large sub 98.7 2.5E-08 8.6E-13 90.1 6.3 71 136-215 84-154 (269)
248 2aot_A HMT, histamine N-methyl 98.6 5.5E-08 1.9E-12 89.3 7.5 112 135-279 50-174 (292)
249 1qyr_A KSGA, high level kasuga 98.6 1.6E-08 5.4E-13 91.5 3.6 91 125-220 9-101 (252)
250 3dp7_A SAM-dependent methyltra 98.6 1.1E-06 3.7E-11 83.4 16.5 112 136-281 178-291 (363)
251 2a14_A Indolethylamine N-methy 98.6 5.5E-08 1.9E-12 88.1 6.9 115 134-278 52-198 (263)
252 3hp7_A Hemolysin, putative; st 98.6 9.5E-08 3.3E-12 88.0 8.3 98 137-276 85-184 (291)
253 2i62_A Nicotinamide N-methyltr 98.6 3.8E-08 1.3E-12 88.3 5.3 138 135-305 54-235 (265)
254 1tw3_A COMT, carminomycin 4-O- 98.6 3.1E-07 1.1E-11 86.7 11.8 113 130-279 176-290 (360)
255 3cc8_A Putative methyltransfer 98.6 1.4E-07 4.9E-12 82.3 8.6 99 136-277 31-130 (230)
256 3gwz_A MMCR; methyltransferase 98.6 2.1E-06 7.1E-11 81.6 16.8 114 131-281 196-311 (369)
257 3mcz_A O-methyltransferase; ad 98.5 4.1E-07 1.4E-11 85.6 11.4 113 133-279 174-289 (352)
258 3i53_A O-methyltransferase; CO 98.5 9.7E-07 3.3E-11 82.4 12.9 109 135-280 167-277 (332)
259 4azs_A Methyltransferase WBDD; 98.5 1.1E-07 3.6E-12 95.8 6.7 75 137-215 66-140 (569)
260 3frh_A 16S rRNA methylase; met 98.5 7.4E-07 2.5E-11 79.6 10.4 71 136-215 104-174 (253)
261 3lcv_B Sisomicin-gentamicin re 98.5 4.8E-07 1.7E-11 81.6 8.8 74 136-215 131-204 (281)
262 2qe6_A Uncharacterized protein 98.4 3.2E-06 1.1E-10 77.1 14.4 111 137-280 77-199 (274)
263 2ip2_A Probable phenazine-spec 98.4 1.1E-06 3.8E-11 82.0 11.5 111 132-280 163-275 (334)
264 3cvo_A Methyltransferase-like 98.4 4.5E-07 1.6E-11 79.1 8.1 79 136-218 29-131 (202)
265 2g72_A Phenylethanolamine N-me 98.4 8.4E-07 2.9E-11 81.1 10.2 111 136-276 70-214 (289)
266 1af7_A Chemotaxis receptor met 98.4 1E-06 3.5E-11 80.5 10.5 107 137-275 105-250 (274)
267 1vlm_A SAM-dependent methyltra 98.4 3E-07 1E-11 80.5 6.1 94 137-279 47-141 (219)
268 3sso_A Methyltransferase; macr 98.4 2E-07 6.7E-12 89.3 5.2 100 137-278 216-325 (419)
269 3opn_A Putative hemolysin; str 98.4 2.8E-07 9.7E-12 82.2 5.7 98 137-276 37-136 (232)
270 2px2_A Genome polyprotein [con 98.3 1.1E-07 3.7E-12 85.1 2.0 77 135-224 71-153 (269)
271 2zfu_A Nucleomethylin, cerebra 98.3 5.9E-07 2E-11 78.2 6.5 117 128-305 58-175 (215)
272 4auk_A Ribosomal RNA large sub 98.3 1.3E-06 4.5E-11 82.6 9.2 73 135-220 209-281 (375)
273 2qy6_A UPF0209 protein YFCK; s 98.3 1.2E-06 4.1E-11 79.3 7.5 130 135-305 58-231 (257)
274 4e2x_A TCAB9; kijanose, tetron 98.2 3.3E-07 1.1E-11 88.4 2.2 105 131-277 101-208 (416)
275 3giw_A Protein of unknown func 98.2 6.7E-06 2.3E-10 75.0 10.1 63 138-200 79-143 (277)
276 2wk1_A NOVP; transferase, O-me 98.1 1.1E-05 3.7E-10 73.9 9.2 81 137-218 106-218 (282)
277 3lst_A CALO1 methyltransferase 98.1 5.4E-06 1.8E-10 78.0 7.4 110 130-279 177-288 (348)
278 4a6d_A Hydroxyindole O-methylt 98.1 3.2E-05 1.1E-09 73.0 12.3 112 133-281 175-287 (353)
279 3g7u_A Cytosine-specific methy 98.1 5.7E-06 2E-10 78.9 7.1 82 139-227 3-89 (376)
280 1g55_A DNA cytosine methyltran 98.0 3.3E-06 1.1E-10 79.6 3.9 84 139-227 3-86 (343)
281 2c7p_A Modification methylase 98.0 1.4E-05 4.8E-10 74.8 7.9 80 138-228 11-90 (327)
282 3p8z_A Mtase, non-structural p 97.9 6.8E-06 2.3E-10 72.5 4.6 123 134-292 75-198 (267)
283 2oo3_A Protein involved in cat 97.9 1.4E-06 4.7E-11 79.5 -0.2 79 137-220 91-170 (283)
284 1fp1_D Isoliquiritigenin 2'-O- 97.9 2.8E-05 9.5E-10 73.7 8.0 67 135-215 207-273 (372)
285 3gcz_A Polyprotein; flavivirus 97.8 2.8E-06 9.6E-11 77.1 0.6 82 135-224 88-170 (282)
286 3o4f_A Spermidine synthase; am 97.8 0.00027 9.3E-09 64.9 13.4 79 138-219 84-167 (294)
287 3reo_A (ISO)eugenol O-methyltr 97.8 7.6E-05 2.6E-09 70.7 10.0 103 135-281 201-304 (368)
288 4gqb_A Protein arginine N-meth 97.8 7E-05 2.4E-09 75.7 9.3 120 138-292 358-484 (637)
289 3p9c_A Caffeic acid O-methyltr 97.7 0.00013 4.4E-09 69.1 10.4 102 135-280 199-301 (364)
290 3evf_A RNA-directed RNA polyme 97.7 1.8E-05 6.2E-10 71.6 4.2 84 134-224 71-154 (277)
291 3eld_A Methyltransferase; flav 97.7 1.6E-05 5.3E-10 72.7 3.6 82 135-224 79-161 (300)
292 3ua3_A Protein arginine N-meth 97.6 3.2E-05 1.1E-09 78.5 4.8 125 138-293 410-552 (745)
293 2zig_A TTHA0409, putative modi 97.6 0.00017 5.6E-09 66.4 9.1 48 136-186 234-281 (297)
294 2k4m_A TR8_protein, UPF0146 pr 97.6 4E-05 1.4E-09 62.9 3.7 64 136-218 34-99 (153)
295 1fp2_A Isoflavone O-methyltran 97.5 0.00011 3.7E-09 69.0 6.8 67 135-215 186-252 (352)
296 2ld4_A Anamorsin; methyltransf 97.5 2.5E-05 8.4E-10 65.6 1.6 62 133-215 8-69 (176)
297 4h0n_A DNMT2; SAH binding, tra 97.4 0.00012 4E-09 68.6 4.6 83 140-227 5-87 (333)
298 3lkz_A Non-structural protein 97.4 0.0002 6.8E-09 65.2 5.8 78 134-218 91-169 (321)
299 2qrv_A DNA (cytosine-5)-methyl 97.3 0.00025 8.5E-09 65.3 6.2 85 136-226 14-100 (295)
300 3qv2_A 5-cytosine DNA methyltr 97.3 0.00012 4.1E-09 68.4 4.0 78 138-222 10-89 (327)
301 2py6_A Methyltransferase FKBM; 97.3 0.00064 2.2E-08 65.4 8.9 65 134-198 223-292 (409)
302 1zg3_A Isoflavanone 4'-O-methy 97.3 0.00031 1.1E-08 66.0 6.6 66 136-215 192-257 (358)
303 3ubt_Y Modification methylase 97.3 0.00022 7.5E-09 66.3 5.4 78 140-227 2-79 (331)
304 1g60_A Adenine-specific methyl 97.2 0.00035 1.2E-08 62.9 6.1 50 135-187 210-259 (260)
305 1i4w_A Mitochondrial replicati 97.2 0.00057 1.9E-08 64.4 7.4 81 117-201 31-118 (353)
306 3c6k_A Spermine synthase; sper 97.1 0.00069 2.4E-08 64.2 6.6 123 136-282 204-337 (381)
307 3me5_A Cytosine-specific methy 96.6 0.0014 4.6E-08 64.4 4.7 85 138-226 88-186 (482)
308 3r24_A NSP16, 2'-O-methyl tran 96.5 0.0045 1.5E-07 56.4 6.6 127 134-308 106-240 (344)
309 3swr_A DNA (cytosine-5)-methyl 95.9 0.019 6.3E-07 61.0 8.8 81 139-226 541-635 (1002)
310 1y1p_A ARII, aldehyde reductas 95.7 0.43 1.5E-05 43.2 16.3 121 137-278 10-132 (342)
311 4dkj_A Cytosine-specific methy 95.6 0.016 5.6E-07 55.4 6.4 89 139-228 11-144 (403)
312 4ft4_B DNA (cytosine-5)-methyl 95.6 0.02 6.9E-07 59.4 7.6 45 138-182 212-260 (784)
313 1eg2_A Modification methylase 95.4 0.016 5.5E-07 53.7 5.5 49 135-186 240-291 (319)
314 3vyw_A MNMC2; tRNA wobble urid 95.4 0.041 1.4E-06 50.6 8.0 128 138-305 97-244 (308)
315 1boo_A Protein (N-4 cytosine-s 95.3 0.012 4.2E-07 54.5 4.4 62 135-200 250-311 (323)
316 3av4_A DNA (cytosine-5)-methyl 94.9 0.047 1.6E-06 59.5 7.7 82 138-226 851-946 (1330)
317 3two_A Mannitol dehydrogenase; 94.6 0.19 6.4E-06 46.6 10.4 68 133-215 172-240 (348)
318 4fs3_A Enoyl-[acyl-carrier-pro 93.7 0.14 4.8E-06 45.4 7.2 85 137-221 5-98 (256)
319 3pvc_A TRNA 5-methylaminomethy 93.3 0.061 2.1E-06 54.9 4.6 129 137-304 58-228 (689)
320 4a2c_A Galactitol-1-phosphate 92.7 0.16 5.6E-06 46.7 6.3 54 131-189 154-208 (346)
321 4dvj_A Putative zinc-dependent 92.3 0.21 7.3E-06 46.6 6.5 48 137-189 171-220 (363)
322 2dph_A Formaldehyde dismutase; 91.7 0.38 1.3E-05 45.4 7.6 50 133-187 181-231 (398)
323 4f6c_A AUSA reductase domain p 90.6 3.6 0.00012 38.7 13.3 80 137-218 68-159 (427)
324 2gn4_A FLAA1 protein, UDP-GLCN 90.3 0.53 1.8E-05 43.4 6.9 78 137-218 20-100 (344)
325 1kol_A Formaldehyde dehydrogen 90.2 0.8 2.7E-05 43.0 8.2 51 133-188 181-232 (398)
326 3rih_A Short chain dehydrogena 90.2 0.89 3.1E-05 41.0 8.2 82 137-219 40-129 (293)
327 3s2e_A Zinc-containing alcohol 89.7 0.95 3.3E-05 41.5 8.2 51 133-189 162-213 (340)
328 3oig_A Enoyl-[acyl-carrier-pro 89.7 0.68 2.3E-05 40.7 6.9 85 137-221 6-99 (266)
329 1pl8_A Human sorbitol dehydrog 89.6 0.96 3.3E-05 41.8 8.1 53 132-189 166-219 (356)
330 3ius_A Uncharacterized conserv 89.6 4.2 0.00014 35.6 12.1 66 139-218 6-72 (286)
331 1f8f_A Benzyl alcohol dehydrog 89.1 0.96 3.3E-05 42.0 7.7 52 133-189 186-238 (371)
332 3o38_A Short chain dehydrogena 89.0 4 0.00014 35.6 11.4 83 137-220 21-112 (266)
333 2zig_A TTHA0409, putative modi 88.9 0.26 9E-06 44.7 3.6 78 188-278 20-97 (297)
334 3grk_A Enoyl-(acyl-carrier-pro 88.7 1.4 4.9E-05 39.5 8.4 80 137-218 30-118 (293)
335 3pk0_A Short-chain dehydrogena 88.4 1.2 4E-05 39.2 7.5 81 137-218 9-97 (262)
336 1wma_A Carbonyl reductase [NAD 88.2 0.85 2.9E-05 39.8 6.4 81 137-219 3-92 (276)
337 3qiv_A Short-chain dehydrogena 88.1 3.1 0.00011 36.0 10.0 81 137-219 8-96 (253)
338 3nzo_A UDP-N-acetylglucosamine 88.0 2.1 7.1E-05 40.3 9.3 81 138-219 35-122 (399)
339 3fpc_A NADP-dependent alcohol 87.4 1.1 3.9E-05 41.2 7.0 54 131-189 160-214 (352)
340 4eez_A Alcohol dehydrogenase 1 87.4 1.7 5.6E-05 39.8 8.1 52 133-189 159-211 (348)
341 3ps9_A TRNA 5-methylaminomethy 87.4 0.56 1.9E-05 47.5 5.2 130 137-304 66-236 (676)
342 3enk_A UDP-glucose 4-epimerase 87.1 0.41 1.4E-05 43.5 3.7 81 138-219 5-88 (341)
343 1uuf_A YAHK, zinc-type alcohol 87.1 1.3 4.5E-05 41.2 7.3 51 133-189 190-241 (369)
344 3pxx_A Carveol dehydrogenase; 87.1 3.8 0.00013 36.1 10.1 81 137-219 9-109 (287)
345 1e3j_A NADP(H)-dependent ketos 87.0 1.7 5.8E-05 40.0 8.0 52 132-189 163-215 (352)
346 3fbg_A Putative arginate lyase 87.0 0.47 1.6E-05 43.8 4.1 47 137-189 150-198 (346)
347 3jv7_A ADH-A; dehydrogenase, n 86.8 1.5 5.3E-05 40.1 7.5 51 134-189 168-219 (345)
348 3ioy_A Short-chain dehydrogena 86.7 5 0.00017 36.3 10.9 82 137-219 7-97 (319)
349 3lf2_A Short chain oxidoreduct 86.6 3.2 0.00011 36.3 9.3 81 138-219 8-97 (265)
350 3ic5_A Putative saccharopine d 86.1 0.77 2.6E-05 34.5 4.3 72 138-218 5-78 (118)
351 3ruf_A WBGU; rossmann fold, UD 86.1 1.2 4.2E-05 40.5 6.4 80 138-218 25-109 (351)
352 3tjr_A Short chain dehydrogena 86.0 4.9 0.00017 36.0 10.3 82 137-220 30-119 (301)
353 2rh8_A Anthocyanidin reductase 85.8 1.9 6.5E-05 38.9 7.5 78 138-218 9-89 (338)
354 1boo_A Protein (N-4 cytosine-s 85.7 0.66 2.3E-05 42.6 4.4 75 188-281 13-87 (323)
355 4ej6_A Putative zinc-binding d 85.6 2.3 7.7E-05 39.6 8.1 54 131-189 176-230 (370)
356 3m6i_A L-arabinitol 4-dehydrog 85.4 1.9 6.5E-05 39.8 7.4 49 132-181 174-223 (363)
357 3dqp_A Oxidoreductase YLBE; al 85.3 1 3.4E-05 38.2 5.0 71 140-220 2-74 (219)
358 2h6e_A ADH-4, D-arabinose 1-de 84.7 2.5 8.5E-05 38.7 7.8 51 134-189 168-219 (344)
359 1p0f_A NADP-dependent alcohol 84.5 1.7 6E-05 40.3 6.8 52 133-189 187-239 (373)
360 2ae2_A Protein (tropinone redu 84.5 5.8 0.0002 34.5 9.9 81 137-219 8-97 (260)
361 1xg5_A ARPG836; short chain de 84.4 10 0.00036 33.1 11.6 80 138-218 32-120 (279)
362 1fmc_A 7 alpha-hydroxysteroid 84.3 3.6 0.00012 35.4 8.3 79 138-218 11-97 (255)
363 1ae1_A Tropinone reductase-I; 84.2 6.5 0.00022 34.5 10.2 80 137-218 20-108 (273)
364 4g81_D Putative hexonate dehyd 84.2 8.7 0.0003 33.9 10.8 80 137-218 8-95 (255)
365 1cdo_A Alcohol dehydrogenase; 84.2 1.9 6.7E-05 40.0 6.9 52 133-189 188-240 (374)
366 1yb1_A 17-beta-hydroxysteroid 84.1 6.5 0.00022 34.4 10.1 81 137-219 30-118 (272)
367 3e8x_A Putative NAD-dependent 84.1 6.7 0.00023 33.3 9.9 72 137-218 20-93 (236)
368 3t4x_A Oxidoreductase, short c 84.1 7.1 0.00024 34.1 10.3 81 138-219 10-95 (267)
369 2yut_A Putative short-chain ox 84.0 1.6 5.4E-05 36.4 5.7 72 140-219 2-76 (207)
370 4eso_A Putative oxidoreductase 83.9 2.6 8.8E-05 36.9 7.2 120 137-278 7-139 (255)
371 1e3i_A Alcohol dehydrogenase, 83.9 2 6.8E-05 39.9 6.8 52 133-189 191-243 (376)
372 3k31_A Enoyl-(acyl-carrier-pro 83.8 2.4 8.1E-05 38.1 7.1 82 137-220 29-119 (296)
373 2jhf_A Alcohol dehydrogenase E 83.8 2.1 7.1E-05 39.8 6.9 52 133-189 187-239 (374)
374 2rhc_B Actinorhodin polyketide 83.7 4 0.00014 36.0 8.6 80 137-218 21-108 (277)
375 2c29_D Dihydroflavonol 4-reduc 83.5 2.9 9.9E-05 37.7 7.7 78 138-217 5-85 (337)
376 2fzw_A Alcohol dehydrogenase c 83.5 2.1 7.1E-05 39.7 6.8 52 133-189 186-238 (373)
377 3tos_A CALS11; methyltransfera 83.5 0.99 3.4E-05 40.2 4.3 81 138-218 70-191 (257)
378 3uog_A Alcohol dehydrogenase; 83.2 2.3 7.9E-05 39.3 7.0 51 133-189 185-236 (363)
379 3uko_A Alcohol dehydrogenase c 83.1 1.5 5.2E-05 40.8 5.7 52 133-189 189-241 (378)
380 3o26_A Salutaridine reductase; 83.0 1.9 6.5E-05 38.3 6.1 84 137-221 11-103 (311)
381 1sb8_A WBPP; epimerase, 4-epim 82.8 1.3 4.5E-05 40.4 5.0 80 138-218 27-111 (352)
382 1piw_A Hypothetical zinc-type 82.5 2.2 7.5E-05 39.4 6.5 51 133-189 175-226 (360)
383 4f6l_B AUSA reductase domain p 82.1 20 0.00069 34.4 13.5 78 139-218 151-240 (508)
384 1gee_A Glucose 1-dehydrogenase 81.9 6 0.00021 34.1 8.8 80 138-219 7-95 (261)
385 4egf_A L-xylulose reductase; s 81.7 3.2 0.00011 36.5 7.0 82 137-220 19-109 (266)
386 1rjw_A ADH-HT, alcohol dehydro 81.6 4.6 0.00016 36.8 8.3 50 133-188 160-210 (339)
387 3e9n_A Putative short-chain de 81.6 9.5 0.00033 32.6 10.0 75 138-219 5-85 (245)
388 3ftp_A 3-oxoacyl-[acyl-carrier 81.1 3.4 0.00012 36.4 7.0 81 137-219 27-115 (270)
389 3ew7_A LMO0794 protein; Q8Y8U8 81.1 1.8 6.1E-05 36.3 4.9 68 140-218 2-70 (221)
390 3l77_A Short-chain alcohol deh 81.1 4.6 0.00016 34.4 7.7 79 138-218 2-89 (235)
391 1vj0_A Alcohol dehydrogenase, 80.9 3.7 0.00013 38.2 7.5 52 133-189 190-243 (380)
392 1xq1_A Putative tropinone redu 80.8 9 0.00031 33.1 9.6 79 138-218 14-101 (266)
393 2efj_A 3,7-dimethylxanthine me 80.8 6 0.0002 37.3 8.8 79 138-216 53-156 (384)
394 3ai3_A NADPH-sorbose reductase 80.7 5.5 0.00019 34.6 8.2 79 138-218 7-94 (263)
395 4ezb_A Uncharacterized conserv 80.6 5.1 0.00017 36.4 8.1 105 139-292 25-135 (317)
396 4ibo_A Gluconate dehydrogenase 80.6 2.6 9E-05 37.2 6.1 81 137-219 25-113 (271)
397 3sc4_A Short chain dehydrogena 80.5 5.8 0.0002 35.2 8.3 123 137-278 8-152 (285)
398 1vl8_A Gluconate 5-dehydrogena 80.5 17 0.00057 31.7 11.3 81 137-219 20-109 (267)
399 3v2g_A 3-oxoacyl-[acyl-carrier 80.4 6.6 0.00023 34.6 8.6 81 137-219 30-119 (271)
400 3ip1_A Alcohol dehydrogenase, 80.2 3.3 0.00011 38.9 6.9 51 134-189 210-261 (404)
401 3r1i_A Short-chain type dehydr 79.9 2.3 7.9E-05 37.7 5.4 82 137-220 31-120 (276)
402 4eye_A Probable oxidoreductase 79.9 1.2 4.2E-05 40.9 3.7 51 133-189 155-207 (342)
403 3gms_A Putative NADPH:quinone 79.8 2.4 8.2E-05 38.8 5.7 52 132-189 139-192 (340)
404 2c07_A 3-oxoacyl-(acyl-carrier 79.7 15 0.00053 32.2 10.9 80 138-219 44-131 (285)
405 3llv_A Exopolyphosphatase-rela 79.5 2.8 9.4E-05 32.8 5.2 72 138-218 6-79 (141)
406 2uvd_A 3-oxoacyl-(acyl-carrier 79.4 10 0.00035 32.5 9.4 80 138-219 4-92 (246)
407 3rku_A Oxidoreductase YMR226C; 79.4 6.4 0.00022 35.1 8.3 80 138-218 33-124 (287)
408 3ksu_A 3-oxoacyl-acyl carrier 79.3 6.3 0.00022 34.4 8.1 124 137-279 10-149 (262)
409 1ja9_A 4HNR, 1,3,6,8-tetrahydr 79.3 3.1 0.0001 36.3 6.0 81 137-219 20-109 (274)
410 3tsc_A Putative oxidoreductase 79.0 18 0.00063 31.5 11.2 81 137-219 10-111 (277)
411 3nbm_A PTS system, lactose-spe 78.9 3.2 0.00011 31.8 5.2 57 138-218 6-62 (108)
412 1zk4_A R-specific alcohol dehy 78.9 9.1 0.00031 32.7 8.9 78 138-218 6-91 (251)
413 1geg_A Acetoin reductase; SDR 78.9 4.8 0.00016 34.9 7.1 78 139-218 3-88 (256)
414 3oec_A Carveol dehydrogenase ( 78.7 18 0.00061 32.5 11.2 82 137-220 45-146 (317)
415 3nx4_A Putative oxidoreductase 78.6 7.4 0.00025 35.0 8.6 50 134-189 142-194 (324)
416 2fr1_A Erythromycin synthase, 78.6 16 0.00055 35.2 11.4 84 135-220 223-317 (486)
417 3b5i_A S-adenosyl-L-methionine 78.5 4.1 0.00014 38.3 6.8 21 138-158 53-73 (374)
418 2pnf_A 3-oxoacyl-[acyl-carrier 78.3 7 0.00024 33.3 7.9 80 138-219 7-95 (248)
419 4fn4_A Short chain dehydrogena 78.2 11 0.00038 33.2 9.3 80 137-218 6-93 (254)
420 3is3_A 17BETA-hydroxysteroid d 78.1 7.9 0.00027 33.9 8.4 81 137-219 17-106 (270)
421 3t7c_A Carveol dehydrogenase; 78.0 21 0.00072 31.6 11.4 80 137-218 27-126 (299)
422 3goh_A Alcohol dehydrogenase, 77.7 2.7 9.3E-05 37.9 5.3 66 133-214 138-204 (315)
423 2ph3_A 3-oxoacyl-[acyl carrier 77.6 18 0.0006 30.6 10.4 79 140-220 3-91 (245)
424 4a7p_A UDP-glucose dehydrogena 77.5 6.5 0.00022 37.7 8.1 139 144-314 12-164 (446)
425 3r3s_A Oxidoreductase; structu 77.5 10 0.00036 33.6 9.1 124 137-278 48-186 (294)
426 1x1t_A D(-)-3-hydroxybutyrate 77.4 7.5 0.00026 33.7 8.0 80 138-219 4-93 (260)
427 3f9i_A 3-oxoacyl-[acyl-carrier 77.0 7.4 0.00025 33.4 7.8 79 137-220 13-95 (249)
428 3h2s_A Putative NADH-flavin re 76.6 2.6 8.9E-05 35.4 4.6 69 140-218 2-71 (224)
429 1mxh_A Pteridine reductase 2; 76.5 14 0.00047 32.2 9.5 80 138-219 11-104 (276)
430 4da9_A Short-chain dehydrogena 76.4 3.8 0.00013 36.3 5.8 80 137-218 28-116 (280)
431 3qp9_A Type I polyketide synth 76.4 26 0.00089 34.2 12.3 85 135-221 248-354 (525)
432 4id9_A Short-chain dehydrogena 75.8 1.8 6.2E-05 39.3 3.5 69 137-219 18-87 (347)
433 1jvb_A NAD(H)-dependent alcoho 75.5 7.7 0.00026 35.4 7.8 51 133-188 166-218 (347)
434 2hq1_A Glucose/ribitol dehydro 75.4 6.8 0.00023 33.4 7.0 80 138-219 5-93 (247)
435 1eg2_A Modification methylase 75.2 1.4 4.9E-05 40.4 2.6 70 190-282 39-110 (319)
436 3qlj_A Short chain dehydrogena 75.0 5.1 0.00017 36.2 6.4 81 137-219 26-124 (322)
437 3gg2_A Sugar dehydrogenase, UD 74.9 16 0.00054 35.0 10.1 120 140-293 4-137 (450)
438 1edo_A Beta-keto acyl carrier 74.7 15 0.0005 31.1 9.0 79 139-219 2-89 (244)
439 3s55_A Putative short-chain de 74.5 10 0.00034 33.3 8.1 81 137-219 9-109 (281)
440 1pqw_A Polyketide synthase; ro 74.5 5 0.00017 33.2 5.7 50 133-188 34-85 (198)
441 4e6p_A Probable sorbitol dehyd 74.3 6.6 0.00022 34.1 6.7 79 137-220 7-93 (259)
442 1xu9_A Corticosteroid 11-beta- 74.2 14 0.00047 32.5 8.9 78 138-216 28-113 (286)
443 2wsb_A Galactitol dehydrogenas 74.0 19 0.00065 30.6 9.6 79 137-220 10-96 (254)
444 1h2b_A Alcohol dehydrogenase; 73.8 9 0.00031 35.2 7.8 52 133-189 182-234 (359)
445 2eih_A Alcohol dehydrogenase; 73.7 6.9 0.00024 35.6 7.0 50 134-189 163-214 (343)
446 1hxh_A 3BETA/17BETA-hydroxyste 73.7 16 0.00054 31.5 9.0 76 138-218 6-89 (253)
447 1zsy_A Mitochondrial 2-enoyl t 73.6 14 0.00047 33.9 9.0 56 133-190 163-220 (357)
448 2d8a_A PH0655, probable L-thre 73.1 6.1 0.00021 36.1 6.4 51 133-189 164-215 (348)
449 2hcy_A Alcohol dehydrogenase 1 73.0 6.3 0.00021 36.0 6.5 50 133-188 165-216 (347)
450 4b7c_A Probable oxidoreductase 72.7 6.3 0.00022 35.7 6.4 52 132-188 144-197 (336)
451 1i24_A Sulfolipid biosynthesis 72.5 4.9 0.00017 37.1 5.7 81 137-219 10-110 (404)
452 2c0c_A Zinc binding alcohol de 72.5 10 0.00035 34.9 7.9 51 133-189 159-211 (362)
453 3osu_A 3-oxoacyl-[acyl-carrier 72.4 14 0.00048 31.7 8.3 81 138-220 4-93 (246)
454 1sny_A Sniffer CG10964-PA; alp 72.3 11 0.00039 32.4 7.8 78 138-218 21-111 (267)
455 2q2v_A Beta-D-hydroxybutyrate 72.3 8.3 0.00028 33.3 6.9 77 138-218 4-88 (255)
456 3u5t_A 3-oxoacyl-[acyl-carrier 72.2 6.6 0.00022 34.5 6.2 81 137-219 26-115 (267)
457 3m1a_A Putative dehydrogenase; 72.0 3.1 0.00011 36.6 4.0 77 138-219 5-89 (281)
458 1cyd_A Carbonyl reductase; sho 71.9 14 0.00047 31.4 8.1 77 137-219 6-86 (244)
459 3ijr_A Oxidoreductase, short c 71.7 28 0.00095 30.7 10.4 124 137-278 46-183 (291)
460 3g0o_A 3-hydroxyisobutyrate de 71.7 11 0.00039 33.6 7.8 65 139-218 8-73 (303)
461 2cfc_A 2-(R)-hydroxypropyl-COM 71.6 11 0.00037 32.2 7.4 80 138-219 2-90 (250)
462 4fgs_A Probable dehydrogenase 71.5 12 0.0004 33.4 7.7 119 137-277 28-159 (273)
463 2wyu_A Enoyl-[acyl carrier pro 71.5 3.6 0.00012 35.9 4.3 79 138-218 8-95 (261)
464 3ojo_A CAP5O; rossmann fold, c 71.4 36 0.0012 32.4 11.5 114 147-294 18-145 (431)
465 1g0o_A Trihydroxynaphthalene r 71.4 12 0.00041 32.9 7.8 79 138-218 29-116 (283)
466 3jyn_A Quinone oxidoreductase; 71.3 7.1 0.00024 35.3 6.4 50 133-188 136-187 (325)
467 2p4h_X Vestitone reductase; NA 71.3 4 0.00014 36.3 4.6 77 139-217 2-82 (322)
468 1m6e_X S-adenosyl-L-methionnin 71.1 1 3.4E-05 42.2 0.5 79 138-216 52-146 (359)
469 3fwz_A Inner membrane protein 71.1 4.8 0.00016 31.6 4.6 72 138-218 7-80 (140)
470 3a28_C L-2.3-butanediol dehydr 70.8 7.3 0.00025 33.8 6.1 80 138-219 2-91 (258)
471 3c85_A Putative glutathione-re 70.8 3.9 0.00013 33.5 4.1 72 138-218 39-114 (183)
472 1e2b_A Enzyme IIB-cellobiose; 70.8 2.6 8.8E-05 32.1 2.7 55 140-218 5-59 (106)
473 1lss_A TRK system potassium up 70.7 4.5 0.00016 31.0 4.3 73 138-218 4-78 (140)
474 2q1s_A Putative nucleotide sug 70.6 3.6 0.00012 38.0 4.3 75 138-218 32-108 (377)
475 2z5l_A Tylkr1, tylactone synth 70.6 8.5 0.00029 37.6 7.1 84 135-220 256-346 (511)
476 1gy8_A UDP-galactose 4-epimera 70.3 7.6 0.00026 35.7 6.5 81 138-219 2-103 (397)
477 3czc_A RMPB; alpha/beta sandwi 70.2 2.3 7.8E-05 32.5 2.3 72 126-219 6-77 (110)
478 2j3h_A NADP-dependent oxidored 70.2 7.6 0.00026 35.3 6.4 51 133-188 151-203 (345)
479 1v3u_A Leukotriene B4 12- hydr 70.0 8.9 0.0003 34.6 6.8 50 133-188 141-192 (333)
480 4dqx_A Probable oxidoreductase 69.7 46 0.0016 29.0 11.3 77 138-219 27-111 (277)
481 3h7a_A Short chain dehydrogena 69.0 16 0.00055 31.5 8.0 81 137-220 6-94 (252)
482 3rkr_A Short chain oxidoreduct 68.7 22 0.00075 30.7 8.9 81 137-219 28-116 (262)
483 3edm_A Short chain dehydrogena 68.5 8.3 0.00028 33.5 6.0 80 137-218 7-95 (259)
484 1tvm_A PTS system, galactitol- 68.5 12 0.00041 28.5 6.2 58 140-220 23-80 (113)
485 3gvc_A Oxidoreductase, probabl 68.3 12 0.00039 33.1 7.0 77 137-218 28-112 (277)
486 2dq4_A L-threonine 3-dehydroge 68.2 4.7 0.00016 36.8 4.5 47 132-180 160-207 (343)
487 3qha_A Putative oxidoreductase 68.1 12 0.00042 33.3 7.2 103 139-292 16-119 (296)
488 4ina_A Saccharopine dehydrogen 67.8 4.3 0.00015 38.4 4.2 77 140-218 3-85 (405)
489 3gdg_A Probable NADP-dependent 67.7 6.7 0.00023 34.0 5.3 82 137-219 19-111 (267)
490 1nff_A Putative oxidoreductase 67.7 16 0.00056 31.6 7.8 78 138-220 7-92 (260)
491 3qwb_A Probable quinone oxidor 67.7 9.6 0.00033 34.5 6.4 50 133-188 144-195 (334)
492 2h7i_A Enoyl-[acyl-carrier-pro 67.4 2.4 8.3E-05 37.2 2.2 78 137-218 6-96 (269)
493 3icc_A Putative 3-oxoacyl-(acy 67.2 9.8 0.00033 32.6 6.2 124 137-279 6-149 (255)
494 2cf5_A Atccad5, CAD, cinnamyl 67.1 12 0.00039 34.4 7.0 52 133-189 175-228 (357)
495 3ucx_A Short chain dehydrogena 67.0 28 0.00096 30.1 9.2 79 137-217 10-96 (264)
496 3rd5_A Mypaa.01249.C; ssgcid, 66.9 24 0.00083 31.0 8.9 78 137-219 15-96 (291)
497 3ko8_A NAD-dependent epimerase 66.6 13 0.00045 32.7 7.1 69 140-218 2-71 (312)
498 3rwb_A TPLDH, pyridoxal 4-dehy 66.3 33 0.0011 29.3 9.4 78 137-219 5-90 (247)
499 1iz0_A Quinone oxidoreductase; 66.1 7.6 0.00026 34.6 5.4 49 135-189 123-173 (302)
500 1yo6_A Putative carbonyl reduc 66.0 12 0.0004 31.8 6.4 76 138-218 3-90 (250)
No 1
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=100.00 E-value=3.5e-54 Score=404.49 Aligned_cols=266 Identities=42% Similarity=0.672 Sum_probs=218.2
Q ss_pred CCCCeEEEEcCCCCCHHHHHHHHcc-CCceeec------------------CCCCCeEEeCCCCCCCCchhhhcCeEEEe
Q 019692 62 VPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKD------------------DLVPDLLILPPGCDLHVHPLIVNGCVFLQ 122 (337)
Q Consensus 62 ~~~p~~~RvN~lk~~~~~~~~~L~~-~~~~~~~------------------~~~~~~~~~~~~~~~~~~~~~~~G~~~~Q 122 (337)
.++|+|+|||++|++.+++++.|++ ++.+++. +++|+++.+++...+..++.|++|.+++|
T Consensus 8 ~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~~~~~~~~~~~~~~~~G~~~~Q 87 (309)
T 2b9e_A 8 SQLPRFVRVNTLKTCSDDVVDYFKRQGFSYQGRASSLDDLRALKGKHFLLDPLMPELLVFPAQTDLHEHPLYRAGHLILQ 87 (309)
T ss_dssp -CCCEEEEECTTTCCHHHHHHHHHHTTCEEEEECSSHHHHHTCCTTEEEECSSSTTEEEECTTCCCTTSHHHHTTSEEEC
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeeccccccccccccccccccccCCCceEEeCCCCCcccChHHHCCeEEEE
Confidence 4789999999999999999999875 6766554 55688888876668899999999999999
Q ss_pred chhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q 019692 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202 (337)
Q Consensus 123 d~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~ 202 (337)
|.+|++++.++++++|++|||+|||+|++|+++|+.+++.++|+|+|+++.+++.+++|++++|+.||+++++|+.++..
T Consensus 88 d~~s~l~~~~l~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~ 167 (309)
T 2b9e_A 88 DRASCLPAMLLDPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSP 167 (309)
T ss_dssp CTGGGHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCT
T ss_pred CHHHHHHHHHhCCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCc
Confidence 99999999999999999999999999999999999988789999999999999999999999999999999999988765
Q ss_pred CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCc
Q 019692 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQ 282 (337)
Q Consensus 203 ~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~ 282 (337)
....+.+||+|++||||||+|+++++||..|.. .++++++..++.+|++||++|++++++|.|||||||+++
T Consensus 168 ~~~~~~~fD~Vl~D~PcSg~G~~~r~pd~~~~~--------~~~~~~~~~l~~~Q~~iL~~a~~~l~gG~lvYsTCs~~~ 239 (309)
T 2b9e_A 168 SDPRYHEVHYILLDPSCSGSGMPSRQLEEPGAG--------TPSPVRLHALAGFQQRALCHALTFPSLQRLVYSTCSLCQ 239 (309)
T ss_dssp TCGGGTTEEEEEECCCCCC--------------------------CCHHHHHHHHHHHHHHHTTCTTCCEEEEEESCCCG
T ss_pred cccccCCCCEEEEcCCcCCCCCCccCCChhhhc--------cCCHHHHHHHHHHHHHHHHHHHhccCCCEEEEECCCCCh
Confidence 432235799999999999999999999875532 135678899999999999999998888999999999999
Q ss_pred ccCHHHHHHHhchhcCCC-cEEecCCCCCCcchhhcc--cceeeeeecCCCCCCCCCC
Q 019692 283 VENEDVIKSVLPIAMSFG-FQLATPFPNGTAEASQFL--KALSIYFEPIQWKTKKAFL 337 (337)
Q Consensus 283 ~ENe~vv~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~--~~~~~~f~p~~~~~~~~~~ 337 (337)
+|||++|++||+ ++++ |++++..+.|..++.... ..-++|++||.+.|.|+|+
T Consensus 240 ~Ene~~v~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGfF~ 295 (309)
T 2b9e_A 240 EENEDVVRDALQ--QNPGAFRLAPALPAWPHRGLSTFPGAEHCLRASPETTLSSGFFV 295 (309)
T ss_dssp GGTHHHHHHHHT--TSTTTEEECCCCTTCCCBCCSSSTTGGGSEEECHHHHSSCSEEE
T ss_pred HHhHHHHHHHHH--hCCCcEEEeccccccccccccccCCCCCeEEECCCCCCCCCeEE
Confidence 999999999995 4677 999887778876553321 1234799999999999995
No 2
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=100.00 E-value=5.7e-52 Score=407.55 Aligned_cols=282 Identities=27% Similarity=0.353 Sum_probs=243.1
Q ss_pred cHHHHHHHHHHHHHHcCcccHHHHHHhcCCCCCC-CCeEEEEcCCCCCHHHHHHHHccCCceeecCCCCCeEEeCCCCCC
Q 019692 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVP-KPRYVRVNTLKMDVDSAVLELGKQFVVQKDDLVPDLLILPPGCDL 108 (337)
Q Consensus 30 ~~~~l~~~l~~~~~~~~~~~~~~ll~~~~~~~~~-~p~~~RvN~lk~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~ 108 (337)
+|.|+ +.+|...+| +++++|++++++ + +|+++|||++|++.+++.+.| ++.+++.+|+|+++++.....+
T Consensus 2 lP~w~---~~~~~~~~g-~e~~~~l~a~~~---~~~~~~lRvN~lk~~~~~~~~~l--~~~~~~~~~~~~g~~l~~~~~~ 72 (464)
T 3m6w_A 2 LPKAF---LSRMAELLG-EEFPAFLKALTE---GKRTYGLRVNTLKLPPEAFQRIS--PWPLRPIPWCQEGFYYPEEARP 72 (464)
T ss_dssp CCHHH---HHHHHHHHG-GGHHHHHHHHHT---SCCCCEEEECTTTCCHHHHHHHC--SSCCEEETTEEEEEECCTTCCC
T ss_pred CcHHH---HHHHHHHHH-HHHHHHHHHcCC---CCCCeEEEEcCCCCCHHHHHHHc--CCCceecCCCCceEEECCCCCc
Confidence 45666 456666677 469999999984 5 799999999999999998887 5778899999999999866668
Q ss_pred CCchhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 109 ~~~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..++.|.+|.+++||.+|++++.++++++|++|||+|||||++|+++|+.+++.+.|+|+|+++.+++.+++|++++|+.
T Consensus 73 ~~~~~~~~G~~~vQd~ss~l~a~~L~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~ 152 (464)
T 3m6w_A 73 GPHPFFYAGLYYIQEPSAQAVGVLLDPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAP 152 (464)
T ss_dssp SSSHHHHTTSEEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCC
T ss_pred ccChHHhCCeEEEECHHHHHHHHhcCcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCe
Confidence 89999999999999999999999999999999999999999999999999987799999999999999999999999998
Q ss_pred cEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 019692 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 268 (337)
Q Consensus 189 ~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~ 268 (337)
|.++++|+..+.... .+.||+|++||||||+|+++++|+..+. ++++++..++.+|.++|++|.+++
T Consensus 153 -v~~~~~Da~~l~~~~--~~~FD~Il~D~PcSg~G~~rr~pd~~~~----------~~~~~~~~l~~~Q~~iL~~a~~~L 219 (464)
T 3m6w_A 153 -LAVTQAPPRALAEAF--GTYFHRVLLDAPCSGEGMFRKDREAARH----------WGPSAPKRMAEVQKALLAQASRLL 219 (464)
T ss_dssp -CEEECSCHHHHHHHH--CSCEEEEEEECCCCCGGGTTTCTTSGGG----------CCTTHHHHHHHHHHHHHHHHHTTE
T ss_pred -EEEEECCHHHhhhhc--cccCCEEEECCCcCCccccccChHHhhh----------cCHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999988765211 1579999999999999999999987542 367899999999999999999999
Q ss_pred CC-cEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEecCC---------CCCCcchhhcccceeeeeecCCCCCCCCCC
Q 019692 269 GV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF---------PNGTAEASQFLKALSIYFEPIQWKTKKAFL 337 (337)
Q Consensus 269 ~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~f~p~~~~~~~~~~ 337 (337)
++ |.|||||||++++|||++|++||+ ++++|++++.- +.|......... .+|++||.+.++|+|+
T Consensus 220 kpGG~LvysTCs~~~eEne~vv~~~l~--~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~r~~P~~~~~dGfF~ 294 (464)
T 3m6w_A 220 GPGGVLVYSTCTFAPEENEGVVAHFLK--AHPEFRLEDARLHPLFAPGVPEWGEGNPELLK--TARLWPHRLEGEGHFL 294 (464)
T ss_dssp EEEEEEEEEESCCCGGGTHHHHHHHHH--HCTTEEEECCCCSTTSEECCGGGTTTCGGGGG--SEEECTTTSSSSCEEE
T ss_pred CCCcEEEEEeccCchhcCHHHHHHHHH--HCCCcEEEecccccccccCcccccccccccCC--eEEECCCCCCceeEEE
Confidence 87 899999999999999999999995 46789887532 123322222222 3799999999999996
No 3
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=100.00 E-value=2.1e-50 Score=380.20 Aligned_cols=286 Identities=27% Similarity=0.357 Sum_probs=239.6
Q ss_pred HHHcHHHHHHHHHHHHHHcCcccHHHHHHhcCCCCCCCCeEEEEcCCCCCHHHHHHHHcc-CCceeecCCCCCeEEeCCC
Q 019692 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPG 105 (337)
Q Consensus 27 ~~~~~~~l~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~p~~~RvN~lk~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~ 105 (337)
...+|.|+.+ +|...+| +.+++++++++ .++|+++|||++|++.+++.+.|++ ++.+++.+++|+++.+...
T Consensus 13 ~~~~P~w~~~---~~~~~~g-~~~~~~~~~~~---~~~p~~~RvN~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~ 85 (315)
T 1ixk_A 13 RLGYSKLFAD---RYFQLWG-ERAIRIAEAME---KPLPRCFRVNTLKISVQDLVKRLNKKGFQFKRVPWAKEGFCLTRE 85 (315)
T ss_dssp HTTCCHHHHH---HHHHHHT-THHHHHHHHTT---SCCCCEEEECTTTSCHHHHHHHHHHTTCEEEEETTEEEEEEEEEC
T ss_pred HhCCcHHHHH---HHHHHcc-HHHHHHHHHcC---CCCCeEEEEeCCCCCHHHHHHHHHhCCCeeeECCCCCceEEEeCC
Confidence 3457888855 5666678 78999999988 4789999999999999999999876 7889999999999888533
Q ss_pred -CCCCCchhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH
Q 019692 106 -CDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184 (337)
Q Consensus 106 -~~~~~~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~ 184 (337)
..+..++.|.+|.+++||.+|++++.++++++|++|||+|||+|++|.++++.+.+.++|+|+|+++.+++.+++|+++
T Consensus 86 ~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~ 165 (315)
T 1ixk_A 86 PFSITSTPEFLTGLIYIQEASSMYPPVALDPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSR 165 (315)
T ss_dssp SSCGGGSHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCcccChhHhcceEEEeCHHHHHHHHHhCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 3588899999999999999999999999999999999999999999999999987778999999999999999999999
Q ss_pred hCCCcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 019692 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 264 (337)
Q Consensus 185 ~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A 264 (337)
+|+.+|+++++|+..++.. .++||+|++||||||+|+++++||..+. ++++++..++..|.++|+++
T Consensus 166 ~g~~~v~~~~~D~~~~~~~---~~~fD~Il~d~Pcsg~g~~~~~p~~~~~----------~~~~~~~~~~~~q~~~L~~~ 232 (315)
T 1ixk_A 166 LGVLNVILFHSSSLHIGEL---NVEFDKILLDAPCTGSGTIHKNPERKWN----------RTMDDIKFCQGLQMRLLEKG 232 (315)
T ss_dssp HTCCSEEEESSCGGGGGGG---CCCEEEEEEECCTTSTTTCC------------------CCHHHHHHHHHHHHHHHHHH
T ss_pred hCCCeEEEEECChhhcccc---cccCCEEEEeCCCCCcccccCChhHhhc----------CCHHHHHHHHHHHHHHHHHH
Confidence 9998999999999887542 2579999999999999999998887542 37899999999999999999
Q ss_pred hCCCCC-cEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEecCCCCCCcchhh------ccc--ceeeeeecCCCCCCCC
Q 019692 265 LSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQ------FLK--ALSIYFEPIQWKTKKA 335 (337)
Q Consensus 265 ~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~~~~~~~~~~~~~------~~~--~~~~~f~p~~~~~~~~ 335 (337)
.+++++ |.+||||||++++|||++|+++|+. .+|++++ ++ |..+|.. +.+ ..++|++||.+.|.|+
T Consensus 233 ~~~LkpGG~lv~stcs~~~~Ene~~v~~~l~~---~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~r~~P~~~~~dGf 307 (315)
T 1ixk_A 233 LEVLKPGGILVYSTCSLEPEENEFVIQWALDN---FDVELLP-LK-YGEPALTNPFGIELSEEIKNARRLYPDVHETSGF 307 (315)
T ss_dssp HHHEEEEEEEEEEESCCCGGGTHHHHHHHHHH---SSEEEEC-CC-SSEECCSSGGGCCCCGGGGGSEEECTTTSSSCSE
T ss_pred HHhCCCCCEEEEEeCCCChHHhHHHHHHHHhc---CCCEEec-CC-ccccCcccccccccccccCCEEEECCCCCCcccE
Confidence 999886 8999999999999999999999963 4688865 23 2222211 100 2247999999999999
Q ss_pred CC
Q 019692 336 FL 337 (337)
Q Consensus 336 ~~ 337 (337)
|+
T Consensus 308 F~ 309 (315)
T 1ixk_A 308 FI 309 (315)
T ss_dssp EE
T ss_pred EE
Confidence 95
No 4
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=100.00 E-value=2.3e-50 Score=399.13 Aligned_cols=290 Identities=24% Similarity=0.270 Sum_probs=238.1
Q ss_pred HHcHHHHHHHHHHHHHHcCcc-cHHHHHHhcCCCCCCCCeEEEEcCCCCCHHHHHHHHcc-CCceeecCCCCCeEEeCCC
Q 019692 28 MLHKGAIQLALAQLLVRNKVK-SIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPG 105 (337)
Q Consensus 28 ~~~~~~l~~~l~~~~~~~~~~-~~~~ll~~~~~~~~~~p~~~RvN~lk~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~ 105 (337)
+.+|.|+.+ +|...+|.+ ++++|+++++ .++|+++|||++|++.+++.+.|++ ++.+++.+|+|+++.+...
T Consensus 6 ~~~P~~~~~---~~~~~~g~~~~~~~~~~a~~---~~~p~~lRvN~lk~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~~ 79 (479)
T 2frx_A 6 VYFPDAFLT---QMREAMPSTLSFDDFLAACQ---RPLRRSIRVNTLKISVADFLQLTAPYGWTLTPIPWCEEGFWIERD 79 (479)
T ss_dssp -CCCHHHHH---HHGGGCC----CHHHHHHHT---SCCCCCEEECTTTCCHHHHHHHHGGGCCCCCEETTEEEEEC----
T ss_pred ccCcHHHHH---HHHHHcCccHHHHHHHHhcC---CCCCEEEEEeCCCCCHHHHHHHHHHcCCceeecCCCCceEEEecC
Confidence 356777744 566667865 5799999998 4789999999999999999999976 7888899999999887532
Q ss_pred ----CCCCCchhhhcCeEEEechhhHHHHHHhCCC--CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHH
Q 019692 106 ----CDLHVHPLIVNGCVFLQGKASSMVAAALAPK--PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLK 179 (337)
Q Consensus 106 ----~~~~~~~~~~~G~~~~Qd~ss~l~~~~l~~~--~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~ 179 (337)
..+..++.|.+|.+++||.+|++++.+++++ +|++|||+|||||++|+++|+.+++.+.|+|+|+++.+++.++
T Consensus 80 ~~~~~~~~~~~~~~~G~~~~Qd~~s~l~~~~L~~~~~~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~ 159 (479)
T 2frx_A 80 NEDALPLGSTAEHLSGLFYIQEASSMLPVAALFADGNAPQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLH 159 (479)
T ss_dssp -----CGGGSHHHHTTSEEECCHHHHHHHHHHTTTTCCCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHH
T ss_pred cccccCcccChHHhCcEEEEECHHHHHHHHHhCcccCCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH
Confidence 1578899999999999999999999999998 9999999999999999999999877799999999999999999
Q ss_pred HHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHH
Q 019692 180 DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKK 259 (337)
Q Consensus 180 ~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~ 259 (337)
+|++++|+.||.++++|+..+.... .+.||+|++||||||+|+++++||..+ .|+++++..++.+|.+
T Consensus 160 ~n~~r~g~~nv~~~~~D~~~~~~~~--~~~fD~Il~D~PcSg~G~~~~~pd~~~----------~~~~~~~~~l~~~q~~ 227 (479)
T 2frx_A 160 ANISRCGISNVALTHFDGRVFGAAV--PEMFDAILLDAPCSGEGVVRKDPDALK----------NWSPESNQEIAATQRE 227 (479)
T ss_dssp HHHHHHTCCSEEEECCCSTTHHHHS--TTCEEEEEEECCCCCGGGGGTCTTSSS----------SCCHHHHHHHHHHHHH
T ss_pred HHHHHcCCCcEEEEeCCHHHhhhhc--cccCCEEEECCCcCCcccccCCHHHHh----------hcCHhHHHHHHHHHHH
Confidence 9999999999999999998765311 157999999999999999999888644 2478999999999999
Q ss_pred HHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHhchhcCCCc-EEecCCCCCCcchhhcccceeeeeecCCCCCCCCCC
Q 019692 260 ALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGF-QLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337 (337)
Q Consensus 260 lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~~~~~ 337 (337)
+|.+|.+++++ |.|||||||++++|||++|+++|+ +++++ ++.+....|..........-.+|+.||.+.+.|+|+
T Consensus 228 iL~~a~~~LkpGG~LvysTcs~~~~Ene~vv~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~r~~P~~~~~dGfF~ 305 (479)
T 2frx_A 228 LIDSAFHALRPGGTLVYSTCTLNQEENEAVCLWLKE--TYPDAVEFLPLGDLFPGANKALTEEGFLHVFPQIYDCEGFFV 305 (479)
T ss_dssp HHHHHHHHEEEEEEEEEEESCCSSTTTHHHHHHHHH--HSTTTEEECCCTTSSTTGGGGBCTTSCEEECTTTTTSCCEEE
T ss_pred HHHHHHHhcCCCCEEEEecccCCcccCHHHHHHHHH--HCCCceecccccccccccccccccCCeEEECCCCCCcCccEE
Confidence 99999999887 999999999999999999999995 35565 443322223211111111122799999999999995
No 5
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=100.00 E-value=5.7e-51 Score=399.93 Aligned_cols=279 Identities=23% Similarity=0.233 Sum_probs=233.0
Q ss_pred HHHcHHHHHHHHHHHHHHcCcccHHHHHHhcCCCCCCCC-eEEEEcCCCCCHHHHHHHHccCCcee---ecCCCCCeEEe
Q 019692 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKP-RYVRVNTLKMDVDSAVLELGKQFVVQ---KDDLVPDLLIL 102 (337)
Q Consensus 27 ~~~~~~~l~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~p-~~~RvN~lk~~~~~~~~~L~~~~~~~---~~~~~~~~~~~ 102 (337)
++.+|.|+.+ +|...+|. ++++|++++++ ++| +++|||++|+ +++.+.+ ++.++ +.+|+|++++
T Consensus 5 ~~~~P~w~~~---~~~~~~g~-e~~~~~~a~~~---~~~~~~lRvN~lk~--~~~~~~~--~~~~~~~~~~~~~~~~~~- 72 (456)
T 3m4x_A 5 ATTLPQQFIK---KYRLLLGE-EASDFFSALEQ---GSVKKGFRWNPLKP--AGLDMVQ--TYHSEELQPAPYSNEGFL- 72 (456)
T ss_dssp --CCCHHHHH---HHHHHHGG-GHHHHHHHHHH---CCCCCEEECCTTST--THHHHHH--HHTCSSCCBCTTCTTEEE-
T ss_pred hhhChHHHHH---HHHHHhCH-HHHHHHHHcCC---CCCCcEEEEcCccH--HHHHHhc--CCcccccCCCCCCcceEE-
Confidence 4678888855 55666664 59999999984 678 9999999998 5665544 34455 8899999988
Q ss_pred CCCCCCCCchhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH
Q 019692 103 PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI 182 (337)
Q Consensus 103 ~~~~~~~~~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~ 182 (337)
. ..+..++.|.+|.+++||.+|++++.++++++|++|||+|||||++|+++|+.+++.+.|+|+|+++.+++.+++|+
T Consensus 73 ~--~~~~~~~~~~~G~~~vQd~ss~l~~~~L~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~ 150 (456)
T 3m4x_A 73 G--TVNGKSFLHQAGYEYSQEPSAMIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENI 150 (456)
T ss_dssp S--CCCTTSHHHHTTSCEECCTTTHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHH
T ss_pred c--CCCCCChHHhCCcEEEECHHHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH
Confidence 3 33688999999999999999999999999999999999999999999999999888899999999999999999999
Q ss_pred HHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHH
Q 019692 183 KLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262 (337)
Q Consensus 183 ~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~ 262 (337)
+++|+.||.++++|+..+.... .+.||+|++||||||+|+++++||..+. ++++++..++.+|+++|.
T Consensus 151 ~r~g~~nv~v~~~Da~~l~~~~--~~~FD~Il~DaPCSg~G~~rr~p~~~~~----------~~~~~~~~l~~~Q~~iL~ 218 (456)
T 3m4x_A 151 ERWGVSNAIVTNHAPAELVPHF--SGFFDRIVVDAPCSGEGMFRKDPNAIKE----------WTEESPLYCQKRQQEILS 218 (456)
T ss_dssp HHHTCSSEEEECCCHHHHHHHH--TTCEEEEEEECCCCCGGGTTTCHHHHHH----------CCTTHHHHHHHHHHHHHH
T ss_pred HHcCCCceEEEeCCHHHhhhhc--cccCCEEEECCCCCCccccccCHHHhhh----------cCHHHHHHHHHHHHHHHH
Confidence 9999999999999988764321 1579999999999999999999887542 367889999999999999
Q ss_pred HHhCCCCC-cEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEecCC---------CCCCcchhhcccceeeeeecCCCCC
Q 019692 263 HALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPF---------PNGTAEASQFLKALSIYFEPIQWKT 332 (337)
Q Consensus 263 ~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~f~p~~~~~ 332 (337)
+|.+++++ |.|||||||++++|||++|++||+. ++ |++++.- +.|...+ ... .++|++||.+.|
T Consensus 219 ~a~~~LkpGG~LvYsTCs~~~eEne~vv~~~l~~--~~-~~l~~~~~~~~~~~~~~~~~~~~-~~~--~~~r~~P~~~~~ 292 (456)
T 3m4x_A 219 SAIKMLKNKGQLIYSTCTFAPEENEEIISWLVEN--YP-VTIEEIPLTQSVSSGRSEWGSVA-GLE--KTIRIWPHKDQG 292 (456)
T ss_dssp HHHHTEEEEEEEEEEESCCCGGGTHHHHHHHHHH--SS-EEEECCCCSSCCEECCGGGSSST-TGG--GSEEECTTTSSS
T ss_pred HHHHhcCCCcEEEEEEeecccccCHHHHHHHHHh--CC-CEEEecccccccccccccccccc-ccC--CeEEECCCCCCC
Confidence 99999987 8999999999999999999999963 44 8887532 1222211 111 237999999999
Q ss_pred CCCCC
Q 019692 333 KKAFL 337 (337)
Q Consensus 333 ~~~~~ 337 (337)
+|+|+
T Consensus 293 dGFF~ 297 (456)
T 3m4x_A 293 EGHFV 297 (456)
T ss_dssp SCEEE
T ss_pred cCeEE
Confidence 99996
No 6
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=100.00 E-value=2.2e-48 Score=383.19 Aligned_cols=287 Identities=28% Similarity=0.361 Sum_probs=248.5
Q ss_pred HHHcHHHHHHHHHHHHHHcCcccHHHHHHhcC-CCCCCCCeEEEEcCCCCCHHHHHHHHcc-CCceeecCCCCCeEEeCC
Q 019692 27 LMLHKGAIQLALAQLLVRNKVKSIEDLMALYQ-TPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPP 104 (337)
Q Consensus 27 ~~~~~~~l~~~l~~~~~~~~~~~~~~ll~~~~-~~~~~~p~~~RvN~lk~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~ 104 (337)
-..+|.|+.+ +|...+| +.+++++++++ + ++|+++|||++|++.+++.+.|++ |+.+++++++|+++.++.
T Consensus 154 ~~~~P~w~~~---~~~~~~g-~~~~~~~~a~~~~---~~~~~~Rvn~~k~~~~~~~~~L~~~g~~~~~~~~~~~~~~~~~ 226 (450)
T 2yxl_A 154 KYLAPSWLIE---RVKGILG-DETEDFFRSVNKR---HEWISIRVNTLKANVEEVIGELEEDGVEVVRSERVPTILKIKG 226 (450)
T ss_dssp HHTSCHHHHH---HHHHHHG-GGHHHHHHHHHCC---CCEEEEEECTTTCCHHHHHHHHHHTTCCEEECSSCTTEEEEES
T ss_pred HhcCcHHHHH---HHHHHhh-HHHHHHHHhcCCC---CCCEEEEEcCCCCCHHHHHHHHHhCCccceecCccCceEEeCC
Confidence 3567888855 5566677 78999999986 4 569999999999999999999976 888999999999999965
Q ss_pred CCCCCCchhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH
Q 019692 105 GCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL 184 (337)
Q Consensus 105 ~~~~~~~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~ 184 (337)
...+..++.|.+|.+++||.+|++++.++++++|++|||+|||+|++|.+++..+++.++|+|+|+++.+++.+++++++
T Consensus 227 ~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~ 306 (450)
T 2yxl_A 227 PYNFDTSSAFNEGKIIVQEEASAVASIVLDPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKR 306 (450)
T ss_dssp CCCTTSCHHHHTTSEEECCHHHHHHHHHHCCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHH
T ss_pred CCCcccCchhhCceEEecCchhHHHHHhcCCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHH
Confidence 55788999999999999999999999999999999999999999999999999987668999999999999999999999
Q ss_pred hCCCcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 019692 185 SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 264 (337)
Q Consensus 185 ~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A 264 (337)
+|+.+|.++++|+..++.... .+.||+|++||||||+|+++++||..|. ++++++..++.+|..+|.++
T Consensus 307 ~g~~~v~~~~~D~~~~~~~~~-~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~----------~~~~~~~~l~~~q~~iL~~a 375 (450)
T 2yxl_A 307 MGIKIVKPLVKDARKAPEIIG-EEVADKVLLDAPCTSSGTIGKNPELRWR----------LREDKINEMSQLQRELLESA 375 (450)
T ss_dssp TTCCSEEEECSCTTCCSSSSC-SSCEEEEEEECCCCCGGGTTTSTTHHHH----------CCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCcEEEEEcChhhcchhhc-cCCCCEEEEcCCCCCCeeeccChhhhhh----------CCHHHHHHHHHHHHHHHHHH
Confidence 999899999999988753221 1469999999999999999999987552 25678899999999999999
Q ss_pred hCCCCC-cEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEecCCCCCCcchhhcccceeeeeecCCCCCCCCCC
Q 019692 265 LSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337 (337)
Q Consensus 265 ~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~~~~~ 337 (337)
.+++++ |.|||+|||++++|||++|+++|+ .+++|++++..+.| ..... .-++++.|+.+.+.|+|+
T Consensus 376 ~~~LkpGG~lvy~tcs~~~~ene~~v~~~l~--~~~~~~~~~~~~~~--~~~~~--~~~~~~~P~~~~~dGff~ 443 (450)
T 2yxl_A 376 ARLVKPGGRLLYTTCSIFKEENEKNIRWFLN--VHPEFKLVPLKSPY--DPGFL--EGTMRAWPHRHSTIGFFY 443 (450)
T ss_dssp HTTEEEEEEEEEEESCCCGGGTHHHHHHHHH--HCSSCEECCCCSSS--EECSS--TTCEEECHHHHSSCCEEE
T ss_pred HHhcCCCcEEEEEeCCCChhhHHHHHHHHHH--hCCCCEEeeccccc--ccccC--CCeEEECCCCCCCCceEE
Confidence 999987 899999999999999999999995 46789987655445 11122 223799999999999995
No 7
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=100.00 E-value=1.1e-46 Score=369.00 Aligned_cols=277 Identities=23% Similarity=0.288 Sum_probs=239.8
Q ss_pred cHHHHHHHHHHHHHHcCcccHHHHHHhcCCCCCCCCeEEEEcCCCCCHHHHHHHHcc-CCceeecCCCCCeEEeCCCCCC
Q 019692 30 HKGAIQLALAQLLVRNKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLILPPGCDL 108 (337)
Q Consensus 30 ~~~~l~~~l~~~~~~~~~~~~~~ll~~~~~~~~~~p~~~RvN~lk~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~~~~~ 108 (337)
+|.|+. .+|...+| +..++++++++ .++|+++|||++|++.+++.+.|++ ++...+++++|+++.++....+
T Consensus 145 ~p~w~~---~~~~~~~g-~~~~~~~~~~~---~~~~~~~Rvn~~~~~~~~~~~~l~~~g~~~~~~~~~~~~~~~~~~~~~ 217 (429)
T 1sqg_A 145 HPSWLL---KRLQKAYP-EQWQSIVEANN---QRPPMWLRINRTHHSRDSWLALLDEAGMKGFPHADYPDAVRLETPAPV 217 (429)
T ss_dssp SCHHHH---HHHHHHCT-TTHHHHHHHHT---SCCCEEEEECTTTCCHHHHHHHHHHTTCCEECCTTCTTEEEESSCCCG
T ss_pred CcHHHH---HHHHHHhh-HHHHHHHHhCC---CCCCeEEEEcCCCCCHHHHHHHHHhCCCceeecCCCCCEEEECCCCCc
Confidence 566664 35666778 67899999987 4779999999999999999999876 8888999999999999876778
Q ss_pred CCchhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 109 HVHPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 109 ~~~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..++.|..|.+++||.+|++++.++++++|++|||+|||+|++|.++++.+.+ ++|+|+|+++.+++.++++++++|++
T Consensus 218 ~~~~~~~~G~~~~qd~~s~~~~~~l~~~~g~~VLDlgaG~G~~t~~la~~~~~-~~v~a~D~~~~~l~~~~~~~~~~g~~ 296 (429)
T 1sqg_A 218 HALPGFEDGWVTVQDASAQGCMTWLAPQNGEHILDLCAAPGGKTTHILEVAPE-AQVVAVDIDEQRLSRVYDNLKRLGMK 296 (429)
T ss_dssp GGSTTGGGTSEEECCHHHHTHHHHHCCCTTCEEEEESCTTCHHHHHHHHHCTT-CEEEEEESSTTTHHHHHHHHHHTTCC
T ss_pred ccChHHhCCCeEeeCHHHHHHHHHcCCCCcCeEEEECCCchHHHHHHHHHcCC-CEEEEECCCHHHHHHHHHHHHHcCCC
Confidence 89999999999999999999999999999999999999999999999999754 89999999999999999999999985
Q ss_pred cEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 019692 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 268 (337)
Q Consensus 189 ~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~ 268 (337)
+.++++|+..++.... .++||+|++||||||+|+++++||..|. ++++++..++.+|..+|.++.+++
T Consensus 297 -~~~~~~D~~~~~~~~~-~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~----------~~~~~~~~l~~~q~~~L~~a~~~L 364 (429)
T 1sqg_A 297 -ATVKQGDGRYPSQWCG-EQQFDRILLDAPCSATGVIRRHPDIKWL----------RRDRDIPELAQLQSEILDAIWPHL 364 (429)
T ss_dssp -CEEEECCTTCTHHHHT-TCCEEEEEEECCCCCGGGTTTCTTHHHH----------CCTTHHHHHHHHHHHHHHHHGGGE
T ss_pred -eEEEeCchhhchhhcc-cCCCCEEEEeCCCCcccccCCCcchhhc----------CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 7899999987642111 1579999999999999999999987552 257789999999999999999998
Q ss_pred CC-cEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEecCCCCCCcchhhcccceeeeeecCCCCCCCCCC
Q 019692 269 GV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLATPFPNGTAEASQFLKALSIYFEPIQWKTKKAFL 337 (337)
Q Consensus 269 ~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~p~~~~~~~~~~ 337 (337)
++ |.|||||||++++|||++|.++|+ .+++|++++ + |. ..... +++.|+.+.++|+|+
T Consensus 365 kpGG~lvystcs~~~~ene~~v~~~l~--~~~~~~~~~--~-~~----~~~~~--~~~~P~~~~~dGff~ 423 (429)
T 1sqg_A 365 KTGGTLVYATCSVLPEENSLQIKAFLQ--RTADAELCE--T-GT----PEQPG--KQNLPGAEEGDGFFY 423 (429)
T ss_dssp EEEEEEEEEESCCCGGGTHHHHHHHHH--HCTTCEECS--S-BC----SSSBS--EEECCCTTSCCSEEE
T ss_pred CCCCEEEEEECCCChhhHHHHHHHHHH--hCCCCEEeC--C-CC----CCCCe--EEECCCCCCCCceEE
Confidence 87 899999999999999999999995 577899875 2 21 11122 689999999999995
No 8
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=100.00 E-value=1.6e-45 Score=350.82 Aligned_cols=239 Identities=21% Similarity=0.240 Sum_probs=189.1
Q ss_pred HHHHHHH-cCcccHHHHHHhcCCCCCCCCeEEEEcCCCCCHHHHHHHHcc-CCc-----------e----------eecC
Q 019692 38 LAQLLVR-NKVKSIEDLMALYQTPDVPKPRYVRVNTLKMDVDSAVLELGK-QFV-----------V----------QKDD 94 (337)
Q Consensus 38 l~~~~~~-~~~~~~~~ll~~~~~~~~~~p~~~RvN~lk~~~~~~~~~L~~-~~~-----------~----------~~~~ 94 (337)
|.+++.+ +| +....+..++.+ +.+..+|+|+++ +.+++...|+. +.. . .+..
T Consensus 23 Fd~~Y~~~~G-~~W~~~r~aL~~---~~~~~a~vN~f~-~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 97 (359)
T 4fzv_A 23 FDMTYSVQFG-DLWPSIRVSLLS---EQKYGALVNNFA-AWDHVSAKLEQLSAKDFVNEAISHWELQSEGGQSAAPSPAS 97 (359)
T ss_dssp HHHHHHHHHG-GGHHHHHHHHTS---CCCCEEEECTTS-CHHHHHHHHHHTTCEEHHHHHHHTTTCCC-----CCSSCHH
T ss_pred HHHHHHHHhh-hhhHHHHHHHcC---cchhEEEeccCC-ChHHHHHHHHhccCccchhhhhcccccccccccccCCCccc
Confidence 4455544 34 578888888874 567899999986 56677666653 110 0 0000
Q ss_pred -CCC---CeEEeCCCCCCCCchhhhcCe-----EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEE
Q 019692 95 -LVP---DLLILPPGCDLHVHPLIVNGC-----VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKI 165 (337)
Q Consensus 95 -~~~---~~~~~~~~~~~~~~~~~~~G~-----~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V 165 (337)
.++ ..+.++ ..++...+.|+.|. |++||.+||+++.+|+++||++|||+||||||||++|++.+ +.+.|
T Consensus 98 ~~~~~~l~~~~~~-~g~~~~~p~~~~g~~~vqd~~iQd~aS~l~~~~L~~~pg~~VLD~CAaPGGKT~~la~~~-~~~~l 175 (359)
T 4fzv_A 98 WACSPNLRCFTFD-RGDISRFPPARPGSLGVMEYYLMDAASLLPVLALGLQPGDIVLDLCAAPGGKTLALLQTG-CCRNL 175 (359)
T ss_dssp HHSCSSCCEEECC-TTCCCCCCCCCBCTTSSBSEEEECGGGHHHHHHHCCCTTEEEEESSCTTCHHHHHHHHTT-CEEEE
T ss_pred ccCCccceEEecC-CCChhcCCCcccCceeccchhhhCHHHHHHHHHhCCCCCCEEEEecCCccHHHHHHHHhc-CCCcE
Confidence 011 123333 33566677776665 88899999999999999999999999999999999999975 45789
Q ss_pred EEEeCCHHHHHHHHHHHHHhCC------CcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCc--cccCcccCccCCCCC
Q 019692 166 VACELNKERVRRLKDTIKLSGA------ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS--GTAAERLDHLLPSHA 237 (337)
Q Consensus 166 ~avD~~~~~l~~l~~~~~~~g~------~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~--G~~~~~~d~~~~~~~ 237 (337)
+|+|+++.+++.+++|++++|. .+|.+.+.|+..+.... .+.||+||+||||||+ |+++++|+..+.
T Consensus 176 ~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~--~~~fD~VLlDaPCSg~g~g~~r~~~~~~~~--- 250 (359)
T 4fzv_A 176 AANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELE--GDTYDRVLVDVPCTTDRHSLHEEENNIFKR--- 250 (359)
T ss_dssp EEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHS--TTCEEEEEEECCCCCHHHHTTCCTTCTTSG---
T ss_pred EEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhc--cccCCEEEECCccCCCCCcccccChhhhhh---
Confidence 9999999999999999999986 36899999988765332 2579999999999997 777777776442
Q ss_pred CCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHhch
Q 019692 238 SGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPI 295 (337)
Q Consensus 238 ~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~ 295 (337)
++++++..++.+|++||.+|++++++ |+|||||||++++|||+||++||+.
T Consensus 251 -------~~~~~~~~l~~lQ~~iL~~a~~~lkpGG~LVYsTCSl~~~ENE~vV~~~L~~ 302 (359)
T 4fzv_A 251 -------SRKKERQILPVLQVQLLAAGLLATKPGGHVVYSTCSLSHLQNEYVVQGAIEL 302 (359)
T ss_dssp -------GGHHHHHTHHHHHHHHHHHHHHTEEEEEEEEEEESCCCTTTTHHHHHHHHHH
T ss_pred -------CCHHHHHHHHHHHHHHHHHHHhcCCCCcEEEEEeCCCchhhCHHHHHHHHHh
Confidence 47999999999999999999999987 8999999999999999999999964
No 9
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=100.00 E-value=1.3e-44 Score=334.14 Aligned_cols=256 Identities=28% Similarity=0.339 Sum_probs=204.1
Q ss_pred CCCCeEEEEcCCCCCHHHHHHHHcc-CCceeecCCCCCeEEe-CCCCCCCCchhhhcCeEEEechhhHHHHHHhCCCCCC
Q 019692 62 VPKPRYVRVNTLKMDVDSAVLELGK-QFVVQKDDLVPDLLIL-PPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKPGW 139 (337)
Q Consensus 62 ~~~p~~~RvN~lk~~~~~~~~~L~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~ 139 (337)
.++|+|+|||++|.+.+++.+.|++ ++.+++ +++|+++.+ .....+..++.|..|.+++||.+|++++.++++++|+
T Consensus 7 ~~~~~~~rvn~~~~~~~~~~~~l~~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~G~~~~qd~~s~l~~~~l~~~~g~ 85 (274)
T 3ajd_A 7 GEKMQFIRVNTLKINPEVLKKRLENKGVVLEK-TFLDYAFEVKKSPFSIGSTPEYLFGYYMPQSISSMIPPIVLNPREDD 85 (274)
T ss_dssp --CCEEEEECTTTCCHHHHHHHHHTTTCEEEE-CSSTTEEEEEECSSCTTSSHHHHTTSEEECCSGGGHHHHHHCCCTTC
T ss_pred CCCCeEEEEeCCCCCHHHHHHHHHHCCCeecC-CCCCceEEEecCCCCcccChhhhCCeEEEeCHHHHHHHHHhCCCCcC
Confidence 4789999999999999999999976 788888 999999988 3334678899999999999999999999999999999
Q ss_pred eEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-CCCCCccEEEECCC
Q 019692 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-PAYSEVRAILLDPS 218 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-~~~~~fD~IlvDpP 218 (337)
+|||+|||+|++|.++++.+.+.++|+|+|+++.+++.+++|++++|+.++.++++|+.++.... ....+||+|++|||
T Consensus 86 ~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~Vl~d~P 165 (274)
T 3ajd_A 86 FILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDKILLDAP 165 (274)
T ss_dssp EEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEEEEEEEC
T ss_pred EEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCEEEEcCC
Confidence 99999999999999999988777899999999999999999999999989999999988764310 00157999999999
Q ss_pred CCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHhchhc
Q 019692 219 CSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAM 297 (337)
Q Consensus 219 CSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~ 297 (337)
|||+|+++++|. ++.+++..+...|.++|+++.+++++ |.+||+|||++++|||++|+++|+ .
T Consensus 166 cs~~g~~~~~p~--------------~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~~~~ene~~v~~~l~--~ 229 (274)
T 3ajd_A 166 CSGNIIKDKNRN--------------VSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSMEVEENEEVIKYILQ--K 229 (274)
T ss_dssp CC--------------------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCCCTTSSHHHHHHHHH--H
T ss_pred CCCCcccccCCC--------------CCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCCChHHhHHHHHHHHH--h
Confidence 999999987641 36888899999999999999998887 899999999999999999999995 4
Q ss_pred CCCcEEecCC-CCCC-cchhhcccceeeeeecCCCCCCCCCC
Q 019692 298 SFGFQLATPF-PNGT-AEASQFLKALSIYFEPIQWKTKKAFL 337 (337)
Q Consensus 298 ~~~~~~~~~~-~~~~-~~~~~~~~~~~~~f~p~~~~~~~~~~ 337 (337)
+++|++++.- +.+. ...+.....-++|++||.++ +|+
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~---ff~ 268 (274)
T 3ajd_A 230 RNDVELIIIKANEFKGINIKEGYIKGTLRVFPPNEP---FFI 268 (274)
T ss_dssp CSSEEEECCCSTTCTTSCEEECSSTTCEEECTTSCC---EEE
T ss_pred CCCcEEecCccccccCcccccccCCCeEEECCCCCC---EEE
Confidence 6789887532 1111 01111111233799999875 663
No 10
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.76 E-value=1.5e-18 Score=167.49 Aligned_cols=162 Identities=20% Similarity=0.217 Sum_probs=128.6
Q ss_pred chhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 019692 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190 (337)
Q Consensus 111 ~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v 190 (337)
...+++|.|+.|+.+..++...+ ++|.+|||+|||+|+++++++.. + ..|+++|+|+.+++.+++|++.+|+.+
T Consensus 190 ~~~~~tG~f~dqr~~r~~l~~~~--~~g~~VLDlg~GtG~~sl~~a~~--g-a~V~avDis~~al~~a~~n~~~ng~~~- 263 (393)
T 4dmg_A 190 ALAQKTGYYLDQRENRRLFEAMV--RPGERVLDVYSYVGGFALRAARK--G-AYALAVDKDLEALGVLDQAALRLGLRV- 263 (393)
T ss_dssp TTCCTTSSCGGGHHHHHHHHTTC--CTTCEEEEESCTTTHHHHHHHHT--T-CEEEEEESCHHHHHHHHHHHHHHTCCC-
T ss_pred hhccccCcCCCHHHHHHHHHHHh--cCCCeEEEcccchhHHHHHHHHc--C-CeEEEEECCHHHHHHHHHHHHHhCCCC-
Confidence 46678999999999988877654 46999999999999999999885 3 459999999999999999999999874
Q ss_pred EEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC
Q 019692 191 EVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV 270 (337)
Q Consensus 191 ~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~ 270 (337)
.+.++|+.++..... +.||+|++||||... +...+....+.+.+++..+++++++
T Consensus 264 ~~~~~D~~~~l~~~~--~~fD~Ii~dpP~f~~-----------------------~~~~~~~~~~~~~~ll~~a~~~Lkp 318 (393)
T 4dmg_A 264 DIRHGEALPTLRGLE--GPFHHVLLDPPTLVK-----------------------RPEELPAMKRHLVDLVREALRLLAE 318 (393)
T ss_dssp EEEESCHHHHHHTCC--CCEEEEEECCCCCCS-----------------------SGGGHHHHHHHHHHHHHHHHHTEEE
T ss_pred cEEEccHHHHHHHhc--CCCCEEEECCCcCCC-----------------------CHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 466899877543322 349999999998432 1234667788899999999999987
Q ss_pred -cEEEEEcCCCCcccCH--HHHHHHhchhcCCCcEEe
Q 019692 271 -ERVVYSTCSIHQVENE--DVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 271 -G~lvYsTCS~~~~ENe--~vv~~~l~~~~~~~~~~~ 304 (337)
|.|+|+|||.+..+++ ++|...+... ...+++.
T Consensus 319 GG~Lv~~s~s~~~~~~~f~~~v~~a~~~~-g~~~~i~ 354 (393)
T 4dmg_A 319 EGFLWLSSCSYHLRLEDLLEVARRAAADL-GRRLRVH 354 (393)
T ss_dssp EEEEEEEECCTTSCHHHHHHHHHHHHHHH-TCCEEEE
T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHh-CCeEEEE
Confidence 8999999999998886 6777666432 3344443
No 11
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.74 E-value=1.1e-17 Score=150.17 Aligned_cols=131 Identities=21% Similarity=0.141 Sum_probs=99.8
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+++|++|||+|||||++|.++|+.+++.|+|+|+|+++.+++.+.+.+++. .||.++.+|+...........+||+|+
T Consensus 74 l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r--~nv~~i~~Da~~~~~~~~~~~~~D~I~ 151 (232)
T 3id6_C 74 IRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR--PNIFPLLADARFPQSYKSVVENVDVLY 151 (232)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC--TTEEEEECCTTCGGGTTTTCCCEEEEE
T ss_pred CCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc--CCeEEEEcccccchhhhccccceEEEE
Confidence 789999999999999999999999988899999999999998777766553 589999999987543221135799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHH-HhCCCCC-cEEEEE---cC---CCCcccCH
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRH-ALSFPGV-ERVVYS---TC---SIHQVENE 286 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~-A~~~~~~-G~lvYs---TC---S~~~~ENe 286 (337)
+|.+- |+ |.++|.. +.++|++ |.+|++ +| ++.++||.
T Consensus 152 ~d~a~---------~~--------------------------~~~il~~~~~~~LkpGG~lvisik~~~~d~t~~~~e~~ 196 (232)
T 3id6_C 152 VDIAQ---------PD--------------------------QTDIAIYNAKFFLKVNGDMLLVIKARSIDVTKDPKEIY 196 (232)
T ss_dssp ECCCC---------TT--------------------------HHHHHHHHHHHHEEEEEEEEEEEC-------CCSSSST
T ss_pred ecCCC---------hh--------------------------HHHHHHHHHHHhCCCCeEEEEEEccCCcccCCCHHHHH
Confidence 99761 11 3455544 3336776 888866 99 99999999
Q ss_pred HHHHHHhchhcCCCcEEec
Q 019692 287 DVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 287 ~vv~~~l~~~~~~~~~~~~ 305 (337)
+.+.++|+. .+|++..
T Consensus 197 ~~~~~~L~~---~gf~~~~ 212 (232)
T 3id6_C 197 KTEVEKLEN---SNFETIQ 212 (232)
T ss_dssp THHHHHHHH---TTEEEEE
T ss_pred HHHHHHHHH---CCCEEEE
Confidence 888889852 3688764
No 12
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.71 E-value=1e-17 Score=161.08 Aligned_cols=163 Identities=19% Similarity=0.223 Sum_probs=126.3
Q ss_pred chhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 019692 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190 (337)
Q Consensus 111 ~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v 190 (337)
...+.+|.|..|.....+++.+ +|.+|||+|||+|+++.+++.. ..+|+++|+++.+++.+++|++.+|+.++
T Consensus 187 ~~~~~~g~f~~~~~~~~~~~~~----~~~~VLDlg~G~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~n~~~n~~~~~ 259 (382)
T 1wxx_A 187 RAGQKTGAYLDQRENRLYMERF----RGERALDVFSYAGGFALHLALG---FREVVAVDSSAEALRRAEENARLNGLGNV 259 (382)
T ss_dssp STTSCCCCCGGGHHHHHHGGGC----CEEEEEEETCTTTHHHHHHHHH---EEEEEEEESCHHHHHHHHHHHHHTTCTTE
T ss_pred hhcccCccccchHHHHHHHHhc----CCCeEEEeeeccCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCCc
Confidence 3456778888887776665443 7889999999999999999987 36899999999999999999999999889
Q ss_pred EEEeccCCCCCCCCC-CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Q 019692 191 EVLHGDFLNLDPKDP-AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269 (337)
Q Consensus 191 ~~~~~D~~~~~~~~~-~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~ 269 (337)
+++++|+.+...... ...+||+|++|||+.+.+ +..+....+.+..++..++++++
T Consensus 260 ~~~~~d~~~~~~~~~~~~~~fD~Ii~dpP~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~Lk 316 (382)
T 1wxx_A 260 RVLEANAFDLLRRLEKEGERFDLVVLDPPAFAKG-----------------------KKDVERAYRAYKEVNLRAIKLLK 316 (382)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCCS-----------------------TTSHHHHHHHHHHHHHHHHHTEE
T ss_pred eEEECCHHHHHHHHHhcCCCeeEEEECCCCCCCC-----------------------hhHHHHHHHHHHHHHHHHHHhcC
Confidence 999999877643110 014799999999986532 12345667788999999999988
Q ss_pred C-cEEEEEcCCCCcccC--HHHHHHHhchhcCCCcEEe
Q 019692 270 V-ERVVYSTCSIHQVEN--EDVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 270 ~-G~lvYsTCS~~~~EN--e~vv~~~l~~~~~~~~~~~ 304 (337)
+ |.++++|||.+..++ ++.+...+.. .+..+++.
T Consensus 317 pgG~l~~~~~~~~~~~~~~~~~i~~~~~~-~g~~~~~i 353 (382)
T 1wxx_A 317 EGGILATASCSHHMTEPLFYAMVAEAAQD-AHRLLRVV 353 (382)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHHHH-TTCCEEEE
T ss_pred CCCEEEEEECCCCCCHHHHHHHHHHHHHH-cCCeEEEE
Confidence 7 899999999888775 5666655432 23345554
No 13
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.69 E-value=4.9e-17 Score=157.05 Aligned_cols=155 Identities=18% Similarity=0.189 Sum_probs=121.1
Q ss_pred hhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cE
Q 019692 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NI 190 (337)
Q Consensus 112 ~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v 190 (337)
..+++|.|..|.....++..++ ++|.+|||+|||+|+++..++.. +..+|+++|+++.+++.+++|++.+|+. ++
T Consensus 194 ~~~~tg~f~~~~~~~~~~~~~~--~~~~~VLDl~~G~G~~~~~la~~--g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v 269 (396)
T 2as0_A 194 RGQKTGFFLDQRENRLALEKWV--QPGDRVLDVFTYTGGFAIHAAIA--GADEVIGIDKSPRAIETAKENAKLNGVEDRM 269 (396)
T ss_dssp SSSSSCCCSTTHHHHHHHGGGC--CTTCEEEETTCTTTHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCGGGE
T ss_pred cccccCccCCHHHHHHHHHHHh--hCCCeEEEecCCCCHHHHHHHHC--CCCEEEEEeCCHHHHHHHHHHHHHcCCCccc
Confidence 3466788877777766666543 47899999999999999999885 4569999999999999999999999997 79
Q ss_pred EEEeccCCCCCCCC-CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Q 019692 191 EVLHGDFLNLDPKD-PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269 (337)
Q Consensus 191 ~~~~~D~~~~~~~~-~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~ 269 (337)
+++++|+.+..... ....+||+|++|||+.+.+ ...+......+..++..++++++
T Consensus 270 ~~~~~d~~~~~~~~~~~~~~fD~Vi~dpP~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~Lk 326 (396)
T 2as0_A 270 KFIVGSAFEEMEKLQKKGEKFDIVVLDPPAFVQH-----------------------EKDLKAGLRAYFNVNFAGLNLVK 326 (396)
T ss_dssp EEEESCHHHHHHHHHHTTCCEEEEEECCCCSCSS-----------------------GGGHHHHHHHHHHHHHHHHTTEE
T ss_pred eEEECCHHHHHHHHHhhCCCCCEEEECCCCCCCC-----------------------HHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999987654210 0024799999999976531 22345666778899999999998
Q ss_pred C-cEEEEEcCCCCcccC--HHHHHHHh
Q 019692 270 V-ERVVYSTCSIHQVEN--EDVIKSVL 293 (337)
Q Consensus 270 ~-G~lvYsTCS~~~~EN--e~vv~~~l 293 (337)
+ |.++|+||+.+..++ ++++....
T Consensus 327 pgG~lv~~~~~~~~~~~~~~~~v~~~~ 353 (396)
T 2as0_A 327 DGGILVTCSCSQHVDLQMFKDMIIAAG 353 (396)
T ss_dssp EEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCcEEEEEECCCCCCHHHHHHHHHHHH
Confidence 7 889999999876554 56665544
No 14
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.66 E-value=7.9e-17 Score=166.07 Aligned_cols=153 Identities=14% Similarity=0.192 Sum_probs=120.5
Q ss_pred chhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC--
Q 019692 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-- 188 (337)
Q Consensus 111 ~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-- 188 (337)
...+++|.|..|+....++.... +|.+|||+|||+|+++++++. .+..+|+++|+|+.+++.+++|++.+|+.
T Consensus 516 ~~~~~tG~f~d~r~~r~~l~~~~---~g~~VLDlg~GtG~~sl~aa~--~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~ 590 (703)
T 3v97_A 516 TDYLDTGLFLDHRIARRMLGQMS---KGKDFLNLFSYTGSATVHAGL--GGARSTTTVDMSRTYLEWAERNLRLNGLTGR 590 (703)
T ss_dssp SSSSSCSCCGGGHHHHHHHHHHC---TTCEEEEESCTTCHHHHHHHH--TTCSEEEEEESCHHHHHHHHHHHHHTTCCST
T ss_pred cccccCCCcccHHHHHHHHHHhc---CCCcEEEeeechhHHHHHHHH--CCCCEEEEEeCCHHHHHHHHHHHHHcCCCcc
Confidence 45678899999999988887754 689999999999999998887 34568999999999999999999999987
Q ss_pred cEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 019692 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 268 (337)
Q Consensus 189 ~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~ 268 (337)
+++++++|+.++.... .++||+|++||||.+.+.- ..++....+.+.+++..+++++
T Consensus 591 ~v~~i~~D~~~~l~~~--~~~fD~Ii~DPP~f~~~~~---------------------~~~~~~~~~~~~~ll~~a~~~L 647 (703)
T 3v97_A 591 AHRLIQADCLAWLREA--NEQFDLIFIDPPTFSNSKR---------------------MEDAFDVQRDHLALMKDLKRLL 647 (703)
T ss_dssp TEEEEESCHHHHHHHC--CCCEEEEEECCCSBC----------------------------CCBHHHHHHHHHHHHHHHE
T ss_pred ceEEEecCHHHHHHhc--CCCccEEEECCccccCCcc---------------------chhHHHHHHHHHHHHHHHHHhc
Confidence 7999999988753222 2579999999998764320 0111234567889999999988
Q ss_pred CC-cEEEEEcCCCCcccCHHHHHH
Q 019692 269 GV-ERVVYSTCSIHQVENEDVIKS 291 (337)
Q Consensus 269 ~~-G~lvYsTCS~~~~ENe~vv~~ 291 (337)
++ |.|++|+|+-....+++..+.
T Consensus 648 kpgG~L~~s~~~~~~~~~~~~l~~ 671 (703)
T 3v97_A 648 RAGGTIMFSNNKRGFRMDLDGLAK 671 (703)
T ss_dssp EEEEEEEEEECCTTCCCCHHHHHH
T ss_pred CCCcEEEEEECCcccccCHHHHHH
Confidence 87 899999999777777665543
No 15
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.66 E-value=3.6e-17 Score=158.07 Aligned_cols=165 Identities=14% Similarity=0.069 Sum_probs=124.3
Q ss_pred chhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-C-
Q 019692 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-A- 188 (337)
Q Consensus 111 ~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~- 188 (337)
...+++|.|..|.....++..+ .+|.+|||+|||+|+++++++.. +..+|+++|+++.+++.+++|++.+|+ .
T Consensus 197 ~~~~~tgff~~~~~~~~~l~~~---~~~~~VLDl~cG~G~~sl~la~~--g~~~V~~vD~s~~al~~a~~n~~~ngl~~~ 271 (396)
T 3c0k_A 197 QHGHKTGYYLDQRDSRLATRRY---VENKRVLNCFSYTGGFAVSALMG--GCSQVVSVDTSQEALDIARQNVELNKLDLS 271 (396)
T ss_dssp TTSSTTSSCGGGHHHHHHHHHH---CTTCEEEEESCTTCSHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCGG
T ss_pred cccccCCcCcCHHHHHHHHHHh---hCCCeEEEeeccCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCcc
Confidence 4567789998888887777766 47899999999999999999885 346999999999999999999999999 6
Q ss_pred cEEEEeccCCCCCCCCC-CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 019692 189 NIEVLHGDFLNLDPKDP-AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 267 (337)
Q Consensus 189 ~v~~~~~D~~~~~~~~~-~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~ 267 (337)
+++++++|+.+...... ...+||+|++|||+.+.+. + +. ....+.+..++..++++
T Consensus 272 ~v~~~~~D~~~~~~~~~~~~~~fD~Ii~dpP~~~~~~--~--~~-------------------~~~~~~~~~~l~~~~~~ 328 (396)
T 3c0k_A 272 KAEFVRDDVFKLLRTYRDRGEKFDVIVMDPPKFVENK--S--QL-------------------MGACRGYKDINMLAIQL 328 (396)
T ss_dssp GEEEEESCHHHHHHHHHHTTCCEEEEEECCSSTTTCS--S--SS-------------------SCCCTHHHHHHHHHHHT
T ss_pred ceEEEECCHHHHHHHHHhcCCCCCEEEECCCCCCCCh--h--HH-------------------HHHHHHHHHHHHHHHHh
Confidence 79999999877642110 0147999999999865421 0 00 01112356888999998
Q ss_pred CCC-cEEEEEcCCCCcc--cCHHHHHHHhchhcCCCcEEe
Q 019692 268 PGV-ERVVYSTCSIHQV--ENEDVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 268 ~~~-G~lvYsTCS~~~~--ENe~vv~~~l~~~~~~~~~~~ 304 (337)
+++ |.+++++|+.+.. ++++++...+.. .+..+++.
T Consensus 329 LkpgG~l~~~~~~~~~~~~~~~~~i~~~~~~-~g~~~~~i 367 (396)
T 3c0k_A 329 LNEGGILLTFSCSGLMTSDLFQKIIADAAID-AGRDVQFI 367 (396)
T ss_dssp EEEEEEEEEEECCTTCCHHHHHHHHHHHHHH-HTCCEEEE
T ss_pred cCCCcEEEEEeCCCcCCHHHHHHHHHHHHHH-cCCeEEEE
Confidence 887 8999999998776 667888765532 23345554
No 16
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.65 E-value=1e-16 Score=151.37 Aligned_cols=167 Identities=19% Similarity=0.146 Sum_probs=118.6
Q ss_pred chhhhcCeEEEechhhHHHHHHhC-CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 111 HPLIVNGCVFLQGKASSMVAAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 111 ~~~~~~G~~~~Qd~ss~l~~~~l~-~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
...++.|.+..|......+...+. ..++.+|||+|||+|+.++.++.. + .+|+++|+|+.+++.+++|++.+|+.+
T Consensus 126 ~~~~~tg~f~dq~~~~~~l~~~~~~~~~~~~VLDlgcGtG~~sl~la~~--g-a~V~~VD~s~~al~~a~~n~~~~gl~~ 202 (332)
T 2igt_A 126 TAFRHVGVFPEQIVHWEWLKNAVETADRPLKVLNLFGYTGVASLVAAAA--G-AEVTHVDASKKAIGWAKENQVLAGLEQ 202 (332)
T ss_dssp CSSSCCSCCGGGHHHHHHHHHHHHHSSSCCEEEEETCTTCHHHHHHHHT--T-CEEEEECSCHHHHHHHHHHHHHHTCTT
T ss_pred CccccceechHHHHHHHHHHHHHHhcCCCCcEEEcccccCHHHHHHHHc--C-CEEEEEECCHHHHHHHHHHHHHcCCCc
Confidence 345677888888888777777664 456889999999999999999884 3 499999999999999999999999875
Q ss_pred --EEEEeccCCCCCCCCC-CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhC
Q 019692 190 --IEVLHGDFLNLDPKDP-AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266 (337)
Q Consensus 190 --v~~~~~D~~~~~~~~~-~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~ 266 (337)
++++++|+.++..... ...+||+|++||||.+.+.. .+ +....+.+..++..+.+
T Consensus 203 ~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~dPP~~~~~~~---~~-------------------~~~~~~~~~~ll~~~~~ 260 (332)
T 2igt_A 203 APIRWICEDAMKFIQREERRGSTYDIILTDPPKFGRGTH---GE-------------------VWQLFDHLPLMLDICRE 260 (332)
T ss_dssp SCEEEECSCHHHHHHHHHHHTCCBSEEEECCCSEEECTT---CC-------------------EEEHHHHHHHHHHHHHH
T ss_pred cceEEEECcHHHHHHHHHhcCCCceEEEECCccccCCch---HH-------------------HHHHHHHHHHHHHHHHH
Confidence 9999999877542100 01479999999999875421 00 00123345788999999
Q ss_pred CCCC-cE-EEEEcCCCCcccCHHHHHHHhch-hcCCCcEEe
Q 019692 267 FPGV-ER-VVYSTCSIHQVENEDVIKSVLPI-AMSFGFQLA 304 (337)
Q Consensus 267 ~~~~-G~-lvYsTCS~~~~ENe~vv~~~l~~-~~~~~~~~~ 304 (337)
++++ |. ++.++|+.. .+.+....++.. ..+.|+++.
T Consensus 261 ~LkpgG~lli~~~~~~~--~~~~~~~~~l~~a~~~~g~~v~ 299 (332)
T 2igt_A 261 ILSPKALGLVLTAYSIR--ASFYSMHELMRETMRGAGGVVA 299 (332)
T ss_dssp TBCTTCCEEEEEECCTT--SCHHHHHHHHHHHTTTSCSEEE
T ss_pred hcCcCcEEEEEECCCCC--CCHHHHHHHHHHHHHHcCCeEE
Confidence 9887 55 445556544 344555555542 234555553
No 17
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.63 E-value=1.5e-15 Score=137.98 Aligned_cols=165 Identities=16% Similarity=0.223 Sum_probs=112.4
Q ss_pred hcCeEEEechh-------hHHHHHHhCCC-CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC
Q 019692 115 VNGCVFLQGKA-------SSMVAAALAPK-PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186 (337)
Q Consensus 115 ~~G~~~~Qd~s-------s~l~~~~l~~~-~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g 186 (337)
..+..+.|+.. +.+++.++.++ ++.+|||+|||+|..+..++... .++|+|+|+++.+++.+++|++.++
T Consensus 19 ~~~~~i~q~~~~~~~~~d~~ll~~~~~~~~~~~~vLDlG~G~G~~~~~la~~~--~~~v~gvDi~~~~~~~a~~n~~~~~ 96 (259)
T 3lpm_A 19 AENLRIIQSPSVFSFSIDAVLLAKFSYLPIRKGKIIDLCSGNGIIPLLLSTRT--KAKIVGVEIQERLADMAKRSVAYNQ 96 (259)
T ss_dssp TTTEEEEEBTTTBCCCHHHHHHHHHCCCCSSCCEEEETTCTTTHHHHHHHTTC--CCEEEEECCSHHHHHHHHHHHHHTT
T ss_pred CCCEEEEeCCCCccCcHHHHHHHHHhcCCCCCCEEEEcCCchhHHHHHHHHhc--CCcEEEEECCHHHHHHHHHHHHHCC
Confidence 34566677766 78888888888 89999999999999999998873 3499999999999999999999999
Q ss_pred CC-cEEEEeccCCCCCCCCCCCCCccEEEECCCCCCc---cccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHH
Q 019692 187 AA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS---GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262 (337)
Q Consensus 187 ~~-~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~---G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~ 262 (337)
+. +++++++|+.++..... .++||+|++|||+... |.. .++... ...+ .........++.
T Consensus 97 ~~~~v~~~~~D~~~~~~~~~-~~~fD~Ii~npPy~~~~~~~~~--~~~~~~------------~~a~-~~~~~~~~~~l~ 160 (259)
T 3lpm_A 97 LEDQIEIIEYDLKKITDLIP-KERADIVTCNPPYFATPDTSLK--NTNEHF------------RIAR-HEVMCTLEDTIR 160 (259)
T ss_dssp CTTTEEEECSCGGGGGGTSC-TTCEEEEEECCCC--------------------------------------HHHHHHHH
T ss_pred CcccEEEEECcHHHhhhhhc-cCCccEEEECCCCCCCccccCC--CCchHH------------Hhhh-ccccCCHHHHHH
Confidence 86 59999999988764321 2689999999998765 322 111000 0000 011122357889
Q ss_pred HHhCCCCC-cEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEe
Q 019692 263 HALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 263 ~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~ 304 (337)
.+.+++++ |.+++. .+.++...+...+. ..+|...
T Consensus 161 ~~~~~LkpgG~l~~~----~~~~~~~~~~~~l~---~~~~~~~ 196 (259)
T 3lpm_A 161 VAASLLKQGGKANFV----HRPERLLDIIDIMR---KYRLEPK 196 (259)
T ss_dssp HHHHHEEEEEEEEEE----ECTTTHHHHHHHHH---HTTEEEE
T ss_pred HHHHHccCCcEEEEE----EcHHHHHHHHHHHH---HCCCceE
Confidence 99898887 777763 33444444555553 2355543
No 18
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.61 E-value=4.2e-16 Score=150.06 Aligned_cols=155 Identities=15% Similarity=0.111 Sum_probs=114.5
Q ss_pred hhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC--c
Q 019692 112 PLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA--N 189 (337)
Q Consensus 112 ~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~--~ 189 (337)
...++|.|..|.....+....+ .+|.+|||+|||+|+.++.+|.. +..+|+++|+++.+++.+++|++.+|+. +
T Consensus 189 ~~~~t~ff~~~~~~~~~~~~~~--~~~~~VLDl~cGtG~~sl~la~~--ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~ 264 (385)
T 2b78_A 189 DGLMTGIFLDQRQVRNELINGS--AAGKTVLNLFSYTAAFSVAAAMG--GAMATTSVDLAKRSRALSLAHFEANHLDMAN 264 (385)
T ss_dssp SSSCCSSCGGGHHHHHHHHHTT--TBTCEEEEETCTTTHHHHHHHHT--TBSEEEEEESCTTHHHHHHHHHHHTTCCCTT
T ss_pred ccccCCcCCcHHHHHHHHHHHh--cCCCeEEEEeeccCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCccc
Confidence 4567788877777777776655 57899999999999999999874 3458999999999999999999999997 8
Q ss_pred EEEEeccCCCCCCCC-CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 019692 190 IEVLHGDFLNLDPKD-PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 268 (337)
Q Consensus 190 v~~~~~D~~~~~~~~-~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~ 268 (337)
++++++|+.+..+.. ....+||+|++|||+.+.+. . . .....+.+.+++..+.+++
T Consensus 265 v~~~~~D~~~~l~~~~~~~~~fD~Ii~DPP~~~~~~---~-~-------------------~~~~~~~~~~ll~~~~~~L 321 (385)
T 2b78_A 265 HQLVVMDVFDYFKYARRHHLTYDIIIIDPPSFARNK---K-E-------------------VFSVSKDYHKLIRQGLEIL 321 (385)
T ss_dssp EEEEESCHHHHHHHHHHTTCCEEEEEECCCCC---------C-------------------CCCHHHHHHHHHHHHHHTE
T ss_pred eEEEECCHHHHHHHHHHhCCCccEEEECCCCCCCCh---h-h-------------------HHHHHHHHHHHHHHHHHhc
Confidence 999999987643211 00147999999999865321 0 0 0123345678899999988
Q ss_pred CC-cEEEEEcCCCCc--ccCHHHHHHHh
Q 019692 269 GV-ERVVYSTCSIHQ--VENEDVIKSVL 293 (337)
Q Consensus 269 ~~-G~lvYsTCS~~~--~ENe~vv~~~l 293 (337)
++ |.|++++|+-.. ++..+.+....
T Consensus 322 ~pgG~l~~~~~~~~~~~~~~~~~i~~~~ 349 (385)
T 2b78_A 322 SENGLIIASTNAANMTVSQFKKQIEKGF 349 (385)
T ss_dssp EEEEEEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCcEEEEEeCCCcCCHHHHHHHHHHHH
Confidence 87 788888888765 33455555554
No 19
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.61 E-value=2.6e-16 Score=144.38 Aligned_cols=177 Identities=11% Similarity=0.079 Sum_probs=110.2
Q ss_pred CCCCCeEEEEcCCCCCHHHHH-HHHcc-CCceeecCCCCCeE-EeCCCCCCCCchhhhcCeEEEechhhHHHHHHhCCCC
Q 019692 61 DVPKPRYVRVNTLKMDVDSAV-LELGK-QFVVQKDDLVPDLL-ILPPGCDLHVHPLIVNGCVFLQGKASSMVAAALAPKP 137 (337)
Q Consensus 61 ~~~~p~~~RvN~lk~~~~~~~-~~L~~-~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~G~~~~Qd~ss~l~~~~l~~~~ 137 (337)
....|+|.|+|..+.+.+... +.|.. ++..... .....+ .+.+. .......+..+...+++..+.++...+++.+
T Consensus 33 ~~~~~~~~r~~~~~~~~~~~~~~~l~g~~~g~~~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (275)
T 1yb2_A 33 DEYGKFDESTNSILVKGKMHHLGISRVIEPGDELI-VSGKSFIVSDFS-PMYFGRVIRRNTQIISEIDASYIIMRCGLRP 110 (275)
T ss_dssp SCCEEEETTTTEEEC-CCEEECC-CCCCCTTCEEE-ETTEEEEEECCC-GGGHHHHC------------------CCCCT
T ss_pred CCCCceeccccceeccCCccchhheeCCCCCcEEE-ECCeEEEEeCCC-HHHHHhhccccccccChhhHHHHHHHcCCCC
Confidence 346788999986654332211 11111 1211111 112222 22322 1222344556677778888888888889999
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-GAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~-g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
+.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.++++++.+ |..+++++.+|+.+..+ .++||+|++|
T Consensus 111 ~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~----~~~fD~Vi~~ 186 (275)
T 1yb2_A 111 GMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFIS----DQMYDAVIAD 186 (275)
T ss_dssp TCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCC----SCCEEEEEEC
T ss_pred cCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCc----CCCccEEEEc
Confidence 999999999999999999998666689999999999999999999998 88889999999987322 2579999998
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
+| .+ ..+|+.+.+++++ |.+++++|+.
T Consensus 187 ~~---------~~----------------------------~~~l~~~~~~LkpgG~l~i~~~~~ 214 (275)
T 1yb2_A 187 IP---------DP----------------------------WNHVQKIASMMKPGSVATFYLPNF 214 (275)
T ss_dssp CS---------CG----------------------------GGSHHHHHHTEEEEEEEEEEESSH
T ss_pred Cc---------CH----------------------------HHHHHHHHHHcCCCCEEEEEeCCH
Confidence 87 11 1457788888877 8899888865
No 20
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.60 E-value=1.4e-14 Score=137.63 Aligned_cols=143 Identities=26% Similarity=0.327 Sum_probs=114.7
Q ss_pred hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC
Q 019692 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 126 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~ 205 (337)
+..+...+..+++..|||+|||+|..+..++...++..+|+|+|+|+.+++.+++|++..|+.+|+++++|+.+++...
T Consensus 192 a~~l~~~~~~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D~~~~~~~~- 270 (354)
T 3tma_A 192 AQALLRLADARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRADARHLPRFF- 270 (354)
T ss_dssp HHHHHHHTTCCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECCGGGGGGTC-
T ss_pred HHHHHHHhCCCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCChhhCcccc-
Confidence 3444566778889999999999999999999986456899999999999999999999999988999999999876543
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCccc
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVE 284 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~E 284 (337)
..||+|++|||+.- + ......+..++..+++.+.+++++ |.++++||
T Consensus 271 --~~~D~Ii~npPyg~------r------------------~~~~~~~~~~~~~~~~~~~~~LkpgG~l~i~t~------ 318 (354)
T 3tma_A 271 --PEVDRILANPPHGL------R------------------LGRKEGLFHLYWDFLRGALALLPPGGRVALLTL------ 318 (354)
T ss_dssp --CCCSEEEECCCSCC----------------------------CHHHHHHHHHHHHHHHHTSCTTCEEEEEES------
T ss_pred --CCCCEEEECCCCcC------c------------------cCCcccHHHHHHHHHHHHHHhcCCCcEEEEEeC------
Confidence 45899999999731 0 111235667788999999998876 89999888
Q ss_pred CHHHHHHHhchhcCCCcEEec
Q 019692 285 NEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 285 Ne~vv~~~l~~~~~~~~~~~~ 305 (337)
|+..++.+++ .+|+...
T Consensus 319 ~~~~~~~~~~----~g~~~~~ 335 (354)
T 3tma_A 319 RPALLKRALP----PGFALRH 335 (354)
T ss_dssp CHHHHHHHCC----TTEEEEE
T ss_pred CHHHHHHHhh----cCcEEEE
Confidence 5677777762 6777653
No 21
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.58 E-value=1.9e-14 Score=127.58 Aligned_cols=129 Identities=15% Similarity=0.117 Sum_probs=98.8
Q ss_pred eEEEechh-hHHHHHHhC--CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC-----CCc
Q 019692 118 CVFLQGKA-SSMVAAALA--PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG-----AAN 189 (337)
Q Consensus 118 ~~~~Qd~s-s~l~~~~l~--~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g-----~~~ 189 (337)
...++++. ...+...+. ++++.+|||+|||+|.++.++++.+++.++|+++|+++.+++.++++++++| ..+
T Consensus 55 ~~~~~~p~~~~~~l~~l~~~~~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~ 134 (226)
T 1i1n_A 55 QATISAPHMHAYALELLFDQLHEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGR 134 (226)
T ss_dssp TEEECCHHHHHHHHHHTTTTSCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSS
T ss_pred CceecCHHHHHHHHHHHHhhCCCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCc
Confidence 34455544 223344454 7889999999999999999999987666799999999999999999999876 467
Q ss_pred EEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Q 019692 190 IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269 (337)
Q Consensus 190 v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~ 269 (337)
+.++.+|+...... ...||+|+++++|.. +++.+.+.++
T Consensus 135 v~~~~~d~~~~~~~---~~~fD~i~~~~~~~~--------------------------------------~~~~~~~~Lk 173 (226)
T 1i1n_A 135 VQLVVGDGRMGYAE---EAPYDAIHVGAAAPV--------------------------------------VPQALIDQLK 173 (226)
T ss_dssp EEEEESCGGGCCGG---GCCEEEEEECSBBSS--------------------------------------CCHHHHHTEE
T ss_pred EEEEECCcccCccc---CCCcCEEEECCchHH--------------------------------------HHHHHHHhcC
Confidence 99999998765432 257999999998631 1234556677
Q ss_pred C-cEEEEEcCCCCcccCHH
Q 019692 270 V-ERVVYSTCSIHQVENED 287 (337)
Q Consensus 270 ~-G~lvYsTCS~~~~ENe~ 287 (337)
+ |.+++++|+...+++..
T Consensus 174 pgG~lv~~~~~~~~~~~~~ 192 (226)
T 1i1n_A 174 PGGRLILPVGPAGGNQMLE 192 (226)
T ss_dssp EEEEEEEEESCTTSCEEEE
T ss_pred CCcEEEEEEecCCCceEEE
Confidence 6 89999999987766653
No 22
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.57 E-value=3.6e-14 Score=122.95 Aligned_cols=147 Identities=19% Similarity=0.238 Sum_probs=105.7
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
.+++|.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++..|+ .+++++++|+.++..... ++||+
T Consensus 19 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~--~~fD~ 96 (197)
T 3eey_A 19 FVKEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYID--CPVKA 96 (197)
T ss_dssp HCCTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCC--SCEEE
T ss_pred cCCCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhcc--CCceE
Confidence 467899999999999999999999876668999999999999999999999998 679999999988753322 57999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcc--cCHHHH
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQV--ENEDVI 289 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~--ENe~vv 289 (337)
|++|+|.--.+ +.... ...+ .+..++..+.+++++ |.++.++++-++. +....+
T Consensus 97 v~~~~~~~~~~------~~~~~----------~~~~-------~~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~~~~~~~~ 153 (197)
T 3eey_A 97 VMFNLGYLPSG------DHSIS----------TRPE-------TTIQALSKAMELLVTGGIITVVIYYGGDTGFEEKEKV 153 (197)
T ss_dssp EEEEESBCTTS------CTTCB----------CCHH-------HHHHHHHHHHHHEEEEEEEEEEECCBTTTBSHHHHHH
T ss_pred EEEcCCcccCc------ccccc----------cCcc-------cHHHHHHHHHHhCcCCCEEEEEEccCCCCcHHHHHHH
Confidence 99998751100 00000 0111 234688888888887 7777776554332 233455
Q ss_pred HHHhchhcCCCcEEec
Q 019692 290 KSVLPIAMSFGFQLAT 305 (337)
Q Consensus 290 ~~~l~~~~~~~~~~~~ 305 (337)
..+++.....+|.+..
T Consensus 154 ~~~~~~l~~~~~~v~~ 169 (197)
T 3eey_A 154 LEFLKGVDQKKFIVQR 169 (197)
T ss_dssp HHHHTTSCTTTEEEEE
T ss_pred HHHHHhCCCCcEEEEE
Confidence 5566444455677643
No 23
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.56 E-value=7.4e-15 Score=131.56 Aligned_cols=115 Identities=21% Similarity=0.229 Sum_probs=91.2
Q ss_pred hHHHHHH------hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCC
Q 019692 126 SSMVAAA------LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199 (337)
Q Consensus 126 s~l~~~~------l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~ 199 (337)
|.|++.+ +.++||++|||+|||+|..+.++|..+++.|+|+|+|+++++++.+++++++. .|+..+.+|...
T Consensus 60 sklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~--~ni~~V~~d~~~ 137 (233)
T 4df3_A 60 SKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDR--RNIFPILGDARF 137 (233)
T ss_dssp CHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTC--TTEEEEESCTTC
T ss_pred hHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhh--cCeeEEEEeccC
Confidence 4555544 45899999999999999999999999999999999999999999999988764 589999999876
Q ss_pred CCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEE
Q 019692 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYS 276 (337)
Q Consensus 200 ~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYs 276 (337)
..........+|+|++|.+.... ....+.++.+++|+ |.++.+
T Consensus 138 p~~~~~~~~~vDvVf~d~~~~~~----------------------------------~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 138 PEKYRHLVEGVDGLYADVAQPEQ----------------------------------AAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp GGGGTTTCCCEEEEEECCCCTTH----------------------------------HHHHHHHHHHHEEEEEEEEEE
T ss_pred ccccccccceEEEEEEeccCChh----------------------------------HHHHHHHHHHhccCCCEEEEE
Confidence 54322224679999999883311 13568888888887 777665
No 24
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.56 E-value=5.1e-15 Score=136.21 Aligned_cols=133 Identities=19% Similarity=0.236 Sum_probs=101.3
Q ss_pred hhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCC
Q 019692 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDP 202 (337)
Q Consensus 124 ~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~ 202 (337)
.....+... .++|++|||+|||+|+.+..++... ..+|+|+|+++.+++.+++|++.+|+.+ ++++++|+.++..
T Consensus 114 ~~~~~l~~~--~~~~~~VLDlgcG~G~~~~~la~~~--~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~ 189 (278)
T 2frn_A 114 KERVRMAKV--AKPDELVVDMFAGIGHLSLPIAVYG--KAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG 189 (278)
T ss_dssp HHHHHHHHH--CCTTCEEEETTCTTTTTHHHHHHHT--CCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC
T ss_pred HHHHHHHHh--CCCCCEEEEecccCCHHHHHHHHhC--CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcc
Confidence 344444444 4679999999999999999999873 2379999999999999999999999976 9999999998875
Q ss_pred CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 203 ~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
..+||+|++|||++. ..++..+.+++++ |.+++++|+-.
T Consensus 190 ----~~~fD~Vi~~~p~~~------------------------------------~~~l~~~~~~LkpgG~l~~~~~~~~ 229 (278)
T 2frn_A 190 ----ENIADRILMGYVVRT------------------------------------HEFIPKALSIAKDGAIIHYHNTVPE 229 (278)
T ss_dssp ----CSCEEEEEECCCSSG------------------------------------GGGHHHHHHHEEEEEEEEEEEEEEG
T ss_pred ----cCCccEEEECCchhH------------------------------------HHHHHHHHHHCCCCeEEEEEEeecc
Confidence 257999999999432 1346677777776 89999999843
Q ss_pred ---cccCHHHHHHHhchhcCCCcEE
Q 019692 282 ---QVENEDVIKSVLPIAMSFGFQL 303 (337)
Q Consensus 282 ---~~ENe~vv~~~l~~~~~~~~~~ 303 (337)
..+..+.+...++ ..||++
T Consensus 230 ~~~~~~~~~~i~~~~~---~~G~~~ 251 (278)
T 2frn_A 230 KLMPREPFETFKRITK---EYGYDV 251 (278)
T ss_dssp GGTTTTTHHHHHHHHH---HTTCEE
T ss_pred ccccccHHHHHHHHHH---HcCCee
Confidence 2344445555543 345554
No 25
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.55 E-value=1.4e-14 Score=130.86 Aligned_cols=149 Identities=12% Similarity=0.205 Sum_probs=110.7
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCC
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLN 199 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~ 199 (337)
++.....++..++...++.+|||+|||+|+.+..++..+++.++|+++|+++.+++.+++++++.|+. +|+++.+|+.+
T Consensus 47 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 47 VAANQGQFLALLVRLTQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred cCHHHHHHHHHHHhhcCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34555666666666678899999999999999999998765789999999999999999999999986 69999999876
Q ss_pred CCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 200 ~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
..+.....++||+|++|+++.. ....++.+.+++++ |.||+..+
T Consensus 127 ~l~~~~~~~~fD~V~~d~~~~~-----------------------------------~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDADKPN-----------------------------------NPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp HHHTCCSCCCCSEEEECSCGGG-----------------------------------HHHHHHHHHHTCCTTCEEEEECC
T ss_pred HHHhcCCCCCeEEEEECCchHH-----------------------------------HHHHHHHHHHhcCCCeEEEEeCC
Confidence 4332221247999999987321 12467888888887 88888877
Q ss_pred CCC--------cccCHHHHHHHhch-hcCCCcEEe
Q 019692 279 SIH--------QVENEDVIKSVLPI-AMSFGFQLA 304 (337)
Q Consensus 279 S~~--------~~ENe~vv~~~l~~-~~~~~~~~~ 304 (337)
... ..++...+..+++. ..++.|+..
T Consensus 172 ~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 206 (248)
T 3tfw_A 172 VRDGEVVNPQSADERVQGVRQFIEMMGAEPRLTAT 206 (248)
T ss_dssp SGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEEE
T ss_pred CcCCcccCccccchHHHHHHHHHHHHhhCCCEEEE
Confidence 655 22333445555542 246677664
No 26
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.55 E-value=5.2e-14 Score=129.01 Aligned_cols=155 Identities=13% Similarity=0.117 Sum_probs=110.3
Q ss_pred CeEEEechhhHHHHHHhCC--CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe
Q 019692 117 GCVFLQGKASSMVAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 194 (337)
Q Consensus 117 G~~~~Qd~ss~l~~~~l~~--~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~ 194 (337)
+.++.+.....++..+++. .++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++|++++|+.++++++
T Consensus 87 ~~~ipr~~te~l~~~~l~~~~~~~~~vLDlG~GsG~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~ 165 (276)
T 2b3t_A 87 ATLIPRPDTECLVEQALARLPEQPCRILDLGTGTGAIALALASER-PDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQ 165 (276)
T ss_dssp TSCCCCTTHHHHHHHHHHHSCSSCCEEEEETCTTSHHHHHHHHHC-TTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEEC
T ss_pred CCcccCchHHHHHHHHHHhcccCCCEEEEecCCccHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEE
Confidence 3444455555555544432 568899999999999999999875 4579999999999999999999999998899999
Q ss_pred ccCCCCCCCCCCCCCccEEEECCCCCCccc-------cCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 019692 195 GDFLNLDPKDPAYSEVRAILLDPSCSGSGT-------AAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 267 (337)
Q Consensus 195 ~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~-------~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~ 267 (337)
+|+.+..+ .++||+|+++|||.+.+. +...|+..+ ... ......+..++..+.++
T Consensus 166 ~d~~~~~~----~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al-----------~~~---~~g~~~~~~~l~~~~~~ 227 (276)
T 2b3t_A 166 SDWFSALA----GQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTAL-----------VAA---DSGMADIVHIIEQSRNA 227 (276)
T ss_dssp CSTTGGGT----TCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTT-----------BCH---HHHTHHHHHHHHHHGGG
T ss_pred cchhhhcc----cCCccEEEECCCCCCccccccChhhhhcCcHHHH-----------cCC---CcHHHHHHHHHHHHHHh
Confidence 99877532 257999999999988743 211221110 000 11224457899999998
Q ss_pred CCC-cEEEEEcCCCCcccCHHHHHHHhc
Q 019692 268 PGV-ERVVYSTCSIHQVENEDVIKSVLP 294 (337)
Q Consensus 268 ~~~-G~lvYsTCS~~~~ENe~vv~~~l~ 294 (337)
+++ |.+++..+. .+.+.+..+++
T Consensus 228 LkpgG~l~~~~~~----~~~~~~~~~l~ 251 (276)
T 2b3t_A 228 LVSGGFLLLEHGW----QQGEAVRQAFI 251 (276)
T ss_dssp EEEEEEEEEECCS----SCHHHHHHHHH
T ss_pred cCCCCEEEEEECc----hHHHHHHHHHH
Confidence 887 788876543 34455666664
No 27
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.55 E-value=4.3e-15 Score=142.85 Aligned_cols=124 Identities=14% Similarity=0.030 Sum_probs=97.8
Q ss_pred EechhhHHHHH---HhCC--CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc--EEEE
Q 019692 121 LQGKASSMVAA---ALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN--IEVL 193 (337)
Q Consensus 121 ~Qd~ss~l~~~---~l~~--~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~--v~~~ 193 (337)
.|..+..+... .+.. ++|.+|||+|||+|++++.++...++.++|+++|+++.+++.+++|++.+|+.+ ++++
T Consensus 31 ~~~~nR~l~~~~~~~~~~~~~~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~ 110 (392)
T 3axs_A 31 RMRVNRDLAVLGLEYLCKKLGRPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIH 110 (392)
T ss_dssp GGHHHHHHHHHHHHHHHHHHCSCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred CcHHHHHHHHHHHHHHhhccCCCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEE
Confidence 45555555422 2222 568999999999999999999976555799999999999999999999999976 9999
Q ss_pred eccCCCCCC-CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcE
Q 019692 194 HGDFLNLDP-KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVER 272 (337)
Q Consensus 194 ~~D~~~~~~-~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~ 272 (337)
++|+.++.. .. ...||+|++||+|+. ..+++.|++++++|.
T Consensus 111 ~~Da~~~l~~~~--~~~fD~V~lDP~g~~------------------------------------~~~l~~a~~~Lk~gG 152 (392)
T 3axs_A 111 GMEANFFLRKEW--GFGFDYVDLDPFGTP------------------------------------VPFIESVALSMKRGG 152 (392)
T ss_dssp CSCHHHHHHSCC--SSCEEEEEECCSSCC------------------------------------HHHHHHHHHHEEEEE
T ss_pred eCCHHHHHHHhh--CCCCcEEEECCCcCH------------------------------------HHHHHHHHHHhCCCC
Confidence 999876543 22 247999999997431 247888888778777
Q ss_pred EEEEcCCCCc
Q 019692 273 VVYSTCSIHQ 282 (337)
Q Consensus 273 lvYsTCS~~~ 282 (337)
++|+||+-..
T Consensus 153 ll~~t~t~~~ 162 (392)
T 3axs_A 153 ILSLTATDTA 162 (392)
T ss_dssp EEEEEECCHH
T ss_pred EEEEEecchh
Confidence 9999997655
No 28
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.54 E-value=1.2e-13 Score=120.49 Aligned_cols=136 Identities=12% Similarity=0.103 Sum_probs=106.8
Q ss_pred cCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec
Q 019692 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG 195 (337)
Q Consensus 116 ~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~ 195 (337)
+|.+ .++.....+...+.++++.+|||+|||+|..+..++... +.++|+++|+++.+++.++++++++|+.+++++.+
T Consensus 20 ~g~~-~~~~i~~~~l~~l~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~ 97 (204)
T 3e05_A 20 KKLI-TKQEVRAVTLSKLRLQDDLVMWDIGAGSASVSIEASNLM-PNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEA 97 (204)
T ss_dssp TTTS-CCHHHHHHHHHHTTCCTTCEEEEETCTTCHHHHHHHHHC-TTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEEC
T ss_pred CCcC-ChHHHHHHHHHHcCCCCCCEEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeC
Confidence 3666 555555666777889999999999999999999999884 46899999999999999999999999988999999
Q ss_pred cCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEE
Q 019692 196 DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVV 274 (337)
Q Consensus 196 D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lv 274 (337)
|+.+..... ..||+|+++.+.. + ...+++.+.+++++ |.++
T Consensus 98 d~~~~~~~~---~~~D~i~~~~~~~---------~--------------------------~~~~l~~~~~~LkpgG~l~ 139 (204)
T 3e05_A 98 FAPEGLDDL---PDPDRVFIGGSGG---------M--------------------------LEEIIDAVDRRLKSEGVIV 139 (204)
T ss_dssp CTTTTCTTS---CCCSEEEESCCTT---------C--------------------------HHHHHHHHHHHCCTTCEEE
T ss_pred ChhhhhhcC---CCCCEEEECCCCc---------C--------------------------HHHHHHHHHHhcCCCeEEE
Confidence 987654432 5699999987632 0 13678888887776 8888
Q ss_pred EEcCCCCcccCHHHHHHHhc
Q 019692 275 YSTCSIHQVENEDVIKSVLP 294 (337)
Q Consensus 275 YsTCS~~~~ENe~vv~~~l~ 294 (337)
+++++. ++...+...++
T Consensus 140 ~~~~~~---~~~~~~~~~l~ 156 (204)
T 3e05_A 140 LNAVTL---DTLTKAVEFLE 156 (204)
T ss_dssp EEECBH---HHHHHHHHHHH
T ss_pred EEeccc---ccHHHHHHHHH
Confidence 876653 44555555553
No 29
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.54 E-value=1.4e-14 Score=132.91 Aligned_cols=114 Identities=19% Similarity=0.138 Sum_probs=94.2
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
.+..+.+|++|||+|||+|..+..+|...+ .++|+|+|+++.+++.+++|++.+|+.|+.++++|+.+. +. ..+|
T Consensus 113 ~~~~~~~~~~VLDlgcG~G~~s~~la~~~~-~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~-~~---~~~~ 187 (272)
T 3a27_A 113 MAFISNENEVVVDMFAGIGYFTIPLAKYSK-PKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDV-EL---KDVA 187 (272)
T ss_dssp HHTSCCTTCEEEETTCTTTTTHHHHHHHTC-CSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGC-CC---TTCE
T ss_pred HHHhcCCCCEEEEecCcCCHHHHHHHHhCC-CCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHc-Cc---cCCc
Confidence 344567899999999999999999999853 569999999999999999999999999999999999887 33 2579
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCcccC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~~EN 285 (337)
|+|++|||. +. .+++..+++.+++|.++|.+|.....+.
T Consensus 188 D~Vi~d~p~---~~---------------------------------~~~l~~~~~~LkpgG~l~~s~~~~~~~~ 226 (272)
T 3a27_A 188 DRVIMGYVH---KT---------------------------------HKFLDKTFEFLKDRGVIHYHETVAEKIM 226 (272)
T ss_dssp EEEEECCCS---SG---------------------------------GGGHHHHHHHEEEEEEEEEEEEEEGGGT
T ss_pred eEEEECCcc---cH---------------------------------HHHHHHHHHHcCCCCEEEEEEcCccccc
Confidence 999999995 11 1457777777788778888888775543
No 30
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.53 E-value=3.8e-15 Score=142.97 Aligned_cols=122 Identities=21% Similarity=0.162 Sum_probs=95.6
Q ss_pred echhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh---------------C
Q 019692 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS---------------G 186 (337)
Q Consensus 122 Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~---------------g 186 (337)
|.....+....+...+|.+|||+|||+|.+++.++..++ ..+|+++|+++.+++.+++|++.+ |
T Consensus 32 ~~~nr~l~~~~l~~~~~~~VLDl~aGtG~~~l~~a~~~~-~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~g 110 (378)
T 2dul_A 32 MALNRDIVVVLLNILNPKIVLDALSATGIRGIRFALETP-AEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKG 110 (378)
T ss_dssp GHHHHHHHHHHHHHHCCSEEEESSCTTSHHHHHHHHHSS-CSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEES
T ss_pred hHHHHHHHHHHHHHcCCCEEEECCCchhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccC
Confidence 444444433222222689999999999999999999864 468999999999999999999999 8
Q ss_pred CCcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhC
Q 019692 187 AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS 266 (337)
Q Consensus 187 ~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~ 266 (337)
+.+++++++|+..+.... ...||+|++||||+. ..+|+.|++
T Consensus 111 l~~i~v~~~Da~~~~~~~--~~~fD~I~lDP~~~~------------------------------------~~~l~~a~~ 152 (378)
T 2dul_A 111 EKTIVINHDDANRLMAER--HRYFHFIDLDPFGSP------------------------------------MEFLDTALR 152 (378)
T ss_dssp SSEEEEEESCHHHHHHHS--TTCEEEEEECCSSCC------------------------------------HHHHHHHHH
T ss_pred CCceEEEcCcHHHHHHhc--cCCCCEEEeCCCCCH------------------------------------HHHHHHHHH
Confidence 888999999987664322 146999999999753 256888888
Q ss_pred CCCCcEEEEEcCCCCc
Q 019692 267 FPGVERVVYSTCSIHQ 282 (337)
Q Consensus 267 ~~~~G~lvYsTCS~~~ 282 (337)
.+++|.++|.||+-..
T Consensus 153 ~lk~gG~l~vt~td~~ 168 (378)
T 2dul_A 153 SAKRRGILGVTATDGA 168 (378)
T ss_dssp HEEEEEEEEEEECCHH
T ss_pred hcCCCCEEEEEeecch
Confidence 7787669999998555
No 31
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.53 E-value=1.1e-13 Score=132.45 Aligned_cols=143 Identities=8% Similarity=0.066 Sum_probs=108.3
Q ss_pred hhhhcCeEEEechhhHHHHHHh-CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 019692 112 PLIVNGCVFLQGKASSMVAAAL-APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190 (337)
Q Consensus 112 ~~~~~G~~~~Qd~ss~l~~~~l-~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v 190 (337)
..|.+++...|+..+.++.... ...+|.+|||+| |+|..+..++.. ++.++|+++|+++.+++.+++|++++|+.+|
T Consensus 146 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~VLDlG-G~G~~~~~la~~-~~~~~v~~vDi~~~~l~~a~~~~~~~g~~~v 223 (373)
T 2qm3_A 146 HEFDQAYVTPETTVARVILMHTRGDLENKDIFVLG-DDDLTSIALMLS-GLPKRIAVLDIDERLTKFIEKAANEIGYEDI 223 (373)
T ss_dssp GGGTCCCBCHHHHHHHHHHHHHTTCSTTCEEEEES-CTTCHHHHHHHH-TCCSEEEEECSCHHHHHHHHHHHHHHTCCCE
T ss_pred hhcCCeecCHHHHHHHHHHHhhcCCCCCCEEEEEC-CCCHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCE
Confidence 3466667777777666654432 334689999999 999999998875 3447999999999999999999999998889
Q ss_pred EEEeccCCC-CCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCC
Q 019692 191 EVLHGDFLN-LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPG 269 (337)
Q Consensus 191 ~~~~~D~~~-~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~ 269 (337)
+++.+|+.+ ++... .++||+|++||||...| ...+|..+.+.++
T Consensus 224 ~~~~~D~~~~l~~~~--~~~fD~Vi~~~p~~~~~---------------------------------~~~~l~~~~~~Lk 268 (373)
T 2qm3_A 224 EIFTFDLRKPLPDYA--LHKFDTFITDPPETLEA---------------------------------IRAFVGRGIATLK 268 (373)
T ss_dssp EEECCCTTSCCCTTT--SSCBSEEEECCCSSHHH---------------------------------HHHHHHHHHHTBC
T ss_pred EEEEChhhhhchhhc--cCCccEEEECCCCchHH---------------------------------HHHHHHHHHHHcc
Confidence 999999988 44221 24799999999975321 1578899999888
Q ss_pred C-c-EEEEEcCCCCcccCH---HHHHHHh
Q 019692 270 V-E-RVVYSTCSIHQVENE---DVIKSVL 293 (337)
Q Consensus 270 ~-G-~lvYsTCS~~~~ENe---~vv~~~l 293 (337)
+ | .++|++|+ ..++. ..+..++
T Consensus 269 pgG~~~~~~~~~--~~~~~~~~~~~~~~l 295 (373)
T 2qm3_A 269 GPRCAGYFGITR--RESSLDKWREIQKLL 295 (373)
T ss_dssp STTCEEEEEECT--TTCCHHHHHHHHHHH
T ss_pred cCCeEEEEEEec--CcCCHHHHHHHHHHH
Confidence 7 7 45888887 33444 5566665
No 32
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.52 E-value=4.7e-14 Score=120.95 Aligned_cols=142 Identities=19% Similarity=0.162 Sum_probs=96.6
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
.+++|++|||+|||+|..+..+++. .++|+|+|+|+.+++.++++++..|+.++++++.|+..+.... .++||.|
T Consensus 19 ~~~~~~~vLDiGcG~G~~~~~la~~---~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~--~~~fD~v 93 (185)
T 3mti_A 19 VLDDESIVVDATMGNGNDTAFLAGL---SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYV--REPIRAA 93 (185)
T ss_dssp TCCTTCEEEESCCTTSHHHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTC--CSCEEEE
T ss_pred hCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhc--cCCcCEE
Confidence 3568999999999999999999886 5899999999999999999999999988999998877753222 2579999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCc---ccCHHHH
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQ---VENEDVI 289 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~---~ENe~vv 289 (337)
+++++.--.+ ...+......+...|+.+.+++++ |.++.+.++-++ +|.+. +
T Consensus 94 ~~~~~~~~~~-----------------------~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~-~ 149 (185)
T 3mti_A 94 IFNLGYLPSA-----------------------DKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYYGHDGGDMEKDA-V 149 (185)
T ss_dssp EEEEC----------------------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC------CHHHHH-H
T ss_pred EEeCCCCCCc-----------------------chhcccChhhHHHHHHHHHHhcCCCcEEEEEEeCCCCCCHHHHHH-H
Confidence 9986421100 111222334456778888888887 777776666543 23333 3
Q ss_pred HHHhchhcCCCcEEe
Q 019692 290 KSVLPIAMSFGFQLA 304 (337)
Q Consensus 290 ~~~l~~~~~~~~~~~ 304 (337)
..++......+|.+.
T Consensus 150 ~~~~~~l~~~~~~~~ 164 (185)
T 3mti_A 150 LEYVIGLDQRVFTAM 164 (185)
T ss_dssp HHHHHHSCTTTEEEE
T ss_pred HHHHHhCCCceEEEE
Confidence 444433334456654
No 33
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.52 E-value=3.2e-14 Score=136.12 Aligned_cols=87 Identities=18% Similarity=0.220 Sum_probs=70.7
Q ss_pred HhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC----
Q 019692 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY---- 207 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~---- 207 (337)
.++.. +.+|||+|||+|.+++.+|.. ..+|+|+|+++.+++.+++|++.+|++|++++.+|+.++.......
T Consensus 209 ~~~~~-~~~vLDl~cG~G~~~l~la~~---~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d~~~~~~~~~~~~~~~ 284 (369)
T 3bt7_A 209 VTKGS-KGDLLELYCGNGNFSLALARN---FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMAAEEFTQAMNGVREFN 284 (369)
T ss_dssp HTTTC-CSEEEEESCTTSHHHHHHGGG---SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCCSHHHHHHHSSCCCCT
T ss_pred HhhcC-CCEEEEccCCCCHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECCHHHHHHHHhhccccc
Confidence 34443 689999999999999988874 3699999999999999999999999999999999987653211000
Q ss_pred ---------CCccEEEECCCCCCc
Q 019692 208 ---------SEVRAILLDPSCSGS 222 (337)
Q Consensus 208 ---------~~fD~IlvDpPCSg~ 222 (337)
.+||+|++|||++|.
T Consensus 285 ~l~~~~~~~~~fD~Vv~dPPr~g~ 308 (369)
T 3bt7_A 285 RLQGIDLKSYQCETIFVDPPRSGL 308 (369)
T ss_dssp TGGGSCGGGCCEEEEEECCCTTCC
T ss_pred cccccccccCCCCEEEECcCcccc
Confidence 269999999998753
No 34
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.52 E-value=2e-13 Score=119.83 Aligned_cols=129 Identities=16% Similarity=0.268 Sum_probs=101.3
Q ss_pred EEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCC
Q 019692 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFL 198 (337)
Q Consensus 120 ~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~ 198 (337)
..+..-..++...+.+.++++|||+|||+|..+..++.. .++|+++|+++.+++.++++++++|+. +++++.+|+.
T Consensus 38 ~~~~~~~~~~l~~l~~~~~~~vLDlGcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~ 114 (204)
T 3njr_A 38 ITKSPMRALTLAALAPRRGELLWDIGGGSGSVSVEWCLA---GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAP 114 (204)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTT
T ss_pred CCcHHHHHHHHHhcCCCCCCEEEEecCCCCHHHHHHHHc---CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchh
Confidence 334444556667788899999999999999999999987 479999999999999999999999998 8999999998
Q ss_pred CCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 199 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
+..... ..||+|++++.. + +. +++.+.+.+++ |.+++++
T Consensus 115 ~~~~~~---~~~D~v~~~~~~----------~--------------------------~~-~l~~~~~~LkpgG~lv~~~ 154 (204)
T 3njr_A 115 AALADL---PLPEAVFIGGGG----------S--------------------------QA-LYDRLWEWLAPGTRIVANA 154 (204)
T ss_dssp GGGTTS---CCCSEEEECSCC----------C--------------------------HH-HHHHHHHHSCTTCEEEEEE
T ss_pred hhcccC---CCCCEEEECCcc----------c--------------------------HH-HHHHHHHhcCCCcEEEEEe
Confidence 843332 469999987621 0 13 67888887776 8999988
Q ss_pred CCCCcccCHHHHHHHhc
Q 019692 278 CSIHQVENEDVIKSVLP 294 (337)
Q Consensus 278 CS~~~~ENe~vv~~~l~ 294 (337)
|+. ++...+...++
T Consensus 155 ~~~---~~~~~~~~~l~ 168 (204)
T 3njr_A 155 VTL---ESETLLTQLHA 168 (204)
T ss_dssp CSH---HHHHHHHHHHH
T ss_pred cCc---ccHHHHHHHHH
Confidence 864 55555555554
No 35
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.50 E-value=3e-13 Score=119.98 Aligned_cols=147 Identities=14% Similarity=0.118 Sum_probs=97.0
Q ss_pred CCCCCCeEEeecCC-chhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 134 APKPGWKVLDACSA-PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 134 ~~~~g~~VLDl~aG-~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
.++++.+|||+||| +|..+..++... ..+|+++|+++.+++.++++++.+|+ +++++++|+..+.... .++||+
T Consensus 52 ~~~~~~~vLDlG~G~~G~~~~~la~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~--~~~fD~ 126 (230)
T 3evz_A 52 FLRGGEVALEIGTGHTAMMALMAEKFF--NCKVTATEVDEEFFEYARRNIERNNS-NVRLVKSNGGIIKGVV--EGTFDV 126 (230)
T ss_dssp TCCSSCEEEEECCTTTCHHHHHHHHHH--CCEEEEEECCHHHHHHHHHHHHHTTC-CCEEEECSSCSSTTTC--CSCEEE
T ss_pred hcCCCCEEEEcCCCHHHHHHHHHHHhc--CCEEEEEECCHHHHHHHHHHHHHhCC-CcEEEeCCchhhhhcc--cCceeE
Confidence 45789999999999 999999999875 47999999999999999999999998 8999999976543322 267999
Q ss_pred EEECCCCCCccccCcc-cCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHH
Q 019692 213 ILLDPSCSGSGTAAER-LDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIK 290 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~-~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~ 290 (337)
|++|||+...+.-... +...+ .+. . . -......+++.+.+++++ |.+++.+.+ .+ ++...+.
T Consensus 127 I~~npp~~~~~~~~~~~~~~~~----~~~-~-----~----~~~~~~~~l~~~~~~LkpgG~l~~~~~~-~~-~~~~~~~ 190 (230)
T 3evz_A 127 IFSAPPYYDKPLGRVLTEREAI----GGG-K-----Y----GEEFSVKLLEEAFDHLNPGGKVALYLPD-KE-KLLNVIK 190 (230)
T ss_dssp EEECCCCC-------------------CC-S-----S----SCHHHHHHHHHHGGGEEEEEEEEEEEES-CH-HHHHHHH
T ss_pred EEECCCCcCCccccccChhhhh----ccC-c-----c----chHHHHHHHHHHHHHhCCCeEEEEEecc-cH-hHHHHHH
Confidence 9999998765431110 00000 000 0 0 001226789999998887 777665433 22 3333344
Q ss_pred HHhchhcCCCcEEe
Q 019692 291 SVLPIAMSFGFQLA 304 (337)
Q Consensus 291 ~~l~~~~~~~~~~~ 304 (337)
..++ ..||++.
T Consensus 191 ~~l~---~~g~~~~ 201 (230)
T 3evz_A 191 ERGI---KLGYSVK 201 (230)
T ss_dssp HHHH---HTTCEEE
T ss_pred HHHH---HcCCceE
Confidence 4442 3466654
No 36
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.49 E-value=8.2e-14 Score=123.36 Aligned_cols=148 Identities=14% Similarity=0.181 Sum_probs=107.4
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDF 197 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~ 197 (337)
..+++....++..++...++.+|||+|||+|..+..+++.+.+.++|+++|+++.+++.+++++++.|+. +|+++.+|+
T Consensus 40 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 119 (221)
T 3u81_A 40 MNVGDAKGQIMDAVIREYSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGAS 119 (221)
T ss_dssp GGCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCH
Confidence 3456666777777777778899999999999999999998766789999999999999999999999986 499999998
Q ss_pred CCCCCCCC---CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEE
Q 019692 198 LNLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERV 273 (337)
Q Consensus 198 ~~~~~~~~---~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~l 273 (337)
.+..+... ..++||+|++|+++... ....+++... +++++ |.+
T Consensus 120 ~~~l~~~~~~~~~~~fD~V~~d~~~~~~--------------------------------~~~~~~~~~~-~~LkpgG~l 166 (221)
T 3u81_A 120 QDLIPQLKKKYDVDTLDMVFLDHWKDRY--------------------------------LPDTLLLEKC-GLLRKGTVL 166 (221)
T ss_dssp HHHGGGTTTTSCCCCCSEEEECSCGGGH--------------------------------HHHHHHHHHT-TCCCTTCEE
T ss_pred HHHHHHHHHhcCCCceEEEEEcCCcccc--------------------------------hHHHHHHHhc-cccCCCeEE
Confidence 65432211 11579999999763210 0123456665 77776 889
Q ss_pred EEEcCCCCcccCHHHHHHHhchhcCCCcEEe
Q 019692 274 VYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 274 vYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~ 304 (337)
|+.+|.... .....+ ++. .+++|+..
T Consensus 167 v~~~~~~~~--~~~~~~-~l~--~~~~~~~~ 192 (221)
T 3u81_A 167 LADNVIVPG--TPDFLA-YVR--GSSSFECT 192 (221)
T ss_dssp EESCCCCCC--CHHHHH-HHH--HCTTEEEE
T ss_pred EEeCCCCcc--hHHHHH-HHh--hCCCceEE
Confidence 888887432 234443 442 35566654
No 37
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.49 E-value=4.1e-14 Score=130.07 Aligned_cols=81 Identities=21% Similarity=0.283 Sum_probs=72.2
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
+++|++|||+|||+|++++.+|.. +..+|+|+|+|+.+++.+++|++.+|+.+ |+++++|+.++... ..||.|
T Consensus 123 ~~~g~~VlD~~aG~G~~~i~~a~~--g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~----~~~D~V 196 (278)
T 3k6r_A 123 AKPDELVVDMFAGIGHLSLPIAVY--GKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGE----NIADRI 196 (278)
T ss_dssp CCTTCEEEETTCTTTTTTHHHHHH--TCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCC----SCEEEE
T ss_pred cCCCCEEEEecCcCcHHHHHHHHh--cCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccc----cCCCEE
Confidence 478999999999999999999886 45689999999999999999999999976 99999999987643 579999
Q ss_pred EECCCCCC
Q 019692 214 LLDPSCSG 221 (337)
Q Consensus 214 lvDpPCSg 221 (337)
++|+|.+.
T Consensus 197 i~~~p~~~ 204 (278)
T 3k6r_A 197 LMGYVVRT 204 (278)
T ss_dssp EECCCSSG
T ss_pred EECCCCcH
Confidence 99999654
No 38
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.47 E-value=3.1e-13 Score=131.95 Aligned_cols=89 Identities=27% Similarity=0.316 Sum_probs=75.4
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-CCCCC
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-PAYSE 209 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-~~~~~ 209 (337)
..+.+.++++|||+|||+|..+..++.. ..+|+|+|+++.+++.+++|++.+|+.|++++++|+.+..... ....+
T Consensus 280 ~~l~~~~~~~VLDlgcG~G~~~~~la~~---~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d~~~~l~~~~~~~~~ 356 (433)
T 1uwv_A 280 EWLDVQPEDRVLDLFCGMGNFTLPLATQ---AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHENLEEDVTKQPWAKNG 356 (433)
T ss_dssp HHHTCCTTCEEEEESCTTTTTHHHHHTT---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCTTSCCSSSGGGTTC
T ss_pred HhhcCCCCCEEEECCCCCCHHHHHHHhh---CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECCHHHHhhhhhhhcCC
Confidence 4456778899999999999999999886 4799999999999999999999999999999999998753321 01247
Q ss_pred ccEEEECCCCCCc
Q 019692 210 VRAILLDPSCSGS 222 (337)
Q Consensus 210 fD~IlvDpPCSg~ 222 (337)
||+|++|||++|.
T Consensus 357 fD~Vv~dPPr~g~ 369 (433)
T 1uwv_A 357 FDKVLLDPARAGA 369 (433)
T ss_dssp CSEEEECCCTTCC
T ss_pred CCEEEECCCCccH
Confidence 9999999998874
No 39
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.46 E-value=8e-14 Score=123.21 Aligned_cols=147 Identities=14% Similarity=0.155 Sum_probs=106.0
Q ss_pred echhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCC
Q 019692 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNL 200 (337)
Q Consensus 122 Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~ 200 (337)
+.....++..++...++.+|||+|||+|+.+.+++..+.+.++|+++|+++.+++.+++++++.|+.+ |+++.+|+.+.
T Consensus 43 ~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (223)
T 3duw_A 43 SPTQGKFLQLLVQIQGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDS 122 (223)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred CHHHHHHHHHHHHhhCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHH
Confidence 45556666666666788999999999999999999987656899999999999999999999999875 99999998654
Q ss_pred CCCC--CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 201 DPKD--PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 201 ~~~~--~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
.+.. ....+||+|++|++++. ...+++.+.+++++ |.++...
T Consensus 123 ~~~~~~~~~~~fD~v~~d~~~~~-----------------------------------~~~~l~~~~~~L~pgG~lv~~~ 167 (223)
T 3duw_A 123 LQQIENEKYEPFDFIFIDADKQN-----------------------------------NPAYFEWALKLSRPGTVIIGDN 167 (223)
T ss_dssp HHHHHHTTCCCCSEEEECSCGGG-----------------------------------HHHHHHHHHHTCCTTCEEEEES
T ss_pred HHHHHhcCCCCcCEEEEcCCcHH-----------------------------------HHHHHHHHHHhcCCCcEEEEeC
Confidence 3211 00146999999988431 13578888888887 7777655
Q ss_pred CCCC--------cccCHHHHHHHhch-hcCCCcEE
Q 019692 278 CSIH--------QVENEDVIKSVLPI-AMSFGFQL 303 (337)
Q Consensus 278 CS~~--------~~ENe~vv~~~l~~-~~~~~~~~ 303 (337)
+... ..++...+..|++. ..++.|+.
T Consensus 168 ~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 202 (223)
T 3duw_A 168 VVREGEVIDNTSNDPRVQGIRRFYELIAAEPRVSA 202 (223)
T ss_dssp CSGGGGGGCTTCCCHHHHHHHHHHHHHHHCTTEEE
T ss_pred CCcCCcccCccccchHHHHHHHHHHHHhhCCCeEE
Confidence 5443 12333445555542 23555554
No 40
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.45 E-value=3e-13 Score=121.92 Aligned_cols=94 Identities=20% Similarity=0.319 Sum_probs=81.8
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCC
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLN 199 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~ 199 (337)
+.......+...+++.+|.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.+|+.+ ++++++|+.+
T Consensus 77 ~~~~~~~~i~~~~~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 156 (255)
T 3mb5_A 77 VHPKDAALIVAYAGISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYE 156 (255)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGG
T ss_pred ccHhHHHHHHHhhCCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhh
Confidence 344455667777889999999999999999999999987777899999999999999999999999877 9999999986
Q ss_pred CCCCCCCCCCccEEEECCC
Q 019692 200 LDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 200 ~~~~~~~~~~fD~IlvDpP 218 (337)
..+ ..+||+|++|+|
T Consensus 157 ~~~----~~~~D~v~~~~~ 171 (255)
T 3mb5_A 157 GIE----EENVDHVILDLP 171 (255)
T ss_dssp CCC----CCSEEEEEECSS
T ss_pred ccC----CCCcCEEEECCC
Confidence 532 257999999988
No 41
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.45 E-value=1.1e-13 Score=123.35 Aligned_cols=130 Identities=16% Similarity=0.204 Sum_probs=106.0
Q ss_pred hcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEE
Q 019692 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVL 193 (337)
Q Consensus 115 ~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~ 193 (337)
..|..++|...+.++..++...++.+|||+|||+|..+..++..+. .++|+++|+++.+++.+++++++.|+. +|.++
T Consensus 32 ~~~~~~~~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~ 110 (233)
T 2gpy_A 32 EQQVPIMDLLGMESLLHLLKMAAPARILEIGTAIGYSAIRMAQALP-EATIVSIERDERRYEEAHKHVKALGLESRIELL 110 (233)
T ss_dssp HTTCCCCCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHCT-TCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEE
T ss_pred HcCCCCcCHHHHHHHHHHHhccCCCEEEEecCCCcHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 4567778888888888888888899999999999999999999864 589999999999999999999999985 59999
Q ss_pred eccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cE
Q 019692 194 HGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ER 272 (337)
Q Consensus 194 ~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~ 272 (337)
.+|+.+..+.....++||+|++|++++. +..+++.+.+++++ |.
T Consensus 111 ~~d~~~~~~~~~~~~~fD~I~~~~~~~~-----------------------------------~~~~l~~~~~~L~pgG~ 155 (233)
T 2gpy_A 111 FGDALQLGEKLELYPLFDVLFIDAAKGQ-----------------------------------YRRFFDMYSPMVRPGGL 155 (233)
T ss_dssp CSCGGGSHHHHTTSCCEEEEEEEGGGSC-----------------------------------HHHHHHHHGGGEEEEEE
T ss_pred ECCHHHHHHhcccCCCccEEEECCCHHH-----------------------------------HHHHHHHHHHHcCCCeE
Confidence 9998875221100157999999988541 24678888888887 88
Q ss_pred EEEEcCCC
Q 019692 273 VVYSTCSI 280 (337)
Q Consensus 273 lvYsTCS~ 280 (337)
++++++.+
T Consensus 156 lv~~~~~~ 163 (233)
T 2gpy_A 156 ILSDNVLF 163 (233)
T ss_dssp EEEETTTC
T ss_pred EEEEcCCc
Confidence 88886544
No 42
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.45 E-value=3.5e-13 Score=121.33 Aligned_cols=91 Identities=20% Similarity=0.290 Sum_probs=78.6
Q ss_pred hhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEeccCCCCCCC
Q 019692 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-GAANIEVLHGDFLNLDPK 203 (337)
Q Consensus 125 ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~-g~~~v~~~~~D~~~~~~~ 203 (337)
....+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.. |..+++++.+|+.+.+..
T Consensus 84 ~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~ 163 (258)
T 2pwy_A 84 DASAMVTLLDLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELE 163 (258)
T ss_dssp HHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCC
T ss_pred HHHHHHHHcCCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCC
Confidence 3455666778899999999999999999999998766789999999999999999999998 877899999999876322
Q ss_pred CCCCCCccEEEECCC
Q 019692 204 DPAYSEVRAILLDPS 218 (337)
Q Consensus 204 ~~~~~~fD~IlvDpP 218 (337)
.++||+|++|+|
T Consensus 164 ---~~~~D~v~~~~~ 175 (258)
T 2pwy_A 164 ---EAAYDGVALDLM 175 (258)
T ss_dssp ---TTCEEEEEEESS
T ss_pred ---CCCcCEEEECCc
Confidence 257999999887
No 43
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.44 E-value=8e-13 Score=115.26 Aligned_cols=124 Identities=22% Similarity=0.327 Sum_probs=94.0
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
.+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++.+|+ +++++++|+.+++ .+||+|
T Consensus 46 ~~~~~~~vlD~g~G~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~------~~~D~v 116 (207)
T 1wy7_A 46 GDIEGKVVADLGAGTGVLSYGALLL--GAKEVICVEVDKEAVDVLIENLGEFKG-KFKVFIGDVSEFN------SRVDIV 116 (207)
T ss_dssp TSSTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHTGGGTT-SEEEEESCGGGCC------CCCSEE
T ss_pred CCCCcCEEEEeeCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCC-CEEEEECchHHcC------CCCCEE
Confidence 4567899999999999999999886 345899999999999999999999888 7999999998863 369999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCcccCHHHHHHHh
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVL 293 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~~ENe~vv~~~l 293 (337)
++|||+.-. ++.. ...+|+.+.+++ | .+|++| +.+.++.+.+.+++
T Consensus 117 ~~~~p~~~~---~~~~---------------------------~~~~l~~~~~~l--~-~~~~~~-~~~~~~~~~~~~~l 162 (207)
T 1wy7_A 117 IMNPPFGSQ---RKHA---------------------------DRPFLLKAFEIS--D-VVYSIH-LAKPEVRRFIEKFS 162 (207)
T ss_dssp EECCCCSSS---STTT---------------------------THHHHHHHHHHC--S-EEEEEE-ECCHHHHHHHHHHH
T ss_pred EEcCCCccc---cCCc---------------------------hHHHHHHHHHhc--C-cEEEEE-eCCcCCHHHHHHHH
Confidence 999996432 1110 135566776655 3 478888 34556677777776
Q ss_pred chhcCCCcEE
Q 019692 294 PIAMSFGFQL 303 (337)
Q Consensus 294 ~~~~~~~~~~ 303 (337)
. ..||++
T Consensus 163 ~---~~g~~~ 169 (207)
T 1wy7_A 163 W---EHGFVV 169 (207)
T ss_dssp H---HTTEEE
T ss_pred H---HCCCeE
Confidence 4 345555
No 44
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.44 E-value=2.8e-13 Score=118.47 Aligned_cols=80 Identities=19% Similarity=0.251 Sum_probs=68.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC--CcEEEEeccCCCCCCCCCCCCC-ccEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA--ANIEVLHGDFLNLDPKDPAYSE-VRAI 213 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~--~~v~~~~~D~~~~~~~~~~~~~-fD~I 213 (337)
++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++|++.+|+ .+++++++|+.++.+... .++ ||+|
T Consensus 53 ~~~~vLDlGcGtG~~~~~~~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~fD~I 129 (201)
T 2ift_A 53 HQSECLDGFAGSGSLGFEALSR--QAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVINQSSLDFLKQPQ-NQPHFDVV 129 (201)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEECSCHHHHTTSCC-SSCCEEEE
T ss_pred CCCeEEEcCCccCHHHHHHHHc--cCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEECCHHHHHHhhc-cCCCCCEE
Confidence 6889999999999999987664 346899999999999999999999998 689999999887644311 257 9999
Q ss_pred EECCCC
Q 019692 214 LLDPSC 219 (337)
Q Consensus 214 lvDpPC 219 (337)
++|||+
T Consensus 130 ~~~~~~ 135 (201)
T 2ift_A 130 FLDPPF 135 (201)
T ss_dssp EECCCS
T ss_pred EECCCC
Confidence 999994
No 45
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.44 E-value=5e-13 Score=122.38 Aligned_cols=90 Identities=23% Similarity=0.259 Sum_probs=78.0
Q ss_pred hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCC
Q 019692 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKD 204 (337)
Q Consensus 126 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~ 204 (337)
...+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.+|+ .+++++.+|+.+..+
T Consensus 101 ~~~i~~~~~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-- 178 (277)
T 1o54_A 101 SSFIAMMLDVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFD-- 178 (277)
T ss_dssp HHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCS--
T ss_pred HHHHHHHhCCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHccc--
Confidence 34556677889999999999999999999999876678999999999999999999999998 579999999887622
Q ss_pred CCCCCccEEEECCCC
Q 019692 205 PAYSEVRAILLDPSC 219 (337)
Q Consensus 205 ~~~~~fD~IlvDpPC 219 (337)
.+.||+|++|+|+
T Consensus 179 --~~~~D~V~~~~~~ 191 (277)
T 1o54_A 179 --EKDVDALFLDVPD 191 (277)
T ss_dssp --CCSEEEEEECCSC
T ss_pred --CCccCEEEECCcC
Confidence 1479999999883
No 46
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.43 E-value=8e-13 Score=128.65 Aligned_cols=79 Identities=18% Similarity=0.207 Sum_probs=70.5
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+.++++|||+|||+|..+..+|.. ..+|+|+|+++.+++.+++|++.+|++ ++++.+|+.++... +||+|+
T Consensus 288 ~~~~~~VLDlgcG~G~~sl~la~~---~~~V~gvD~s~~ai~~A~~n~~~ngl~-v~~~~~d~~~~~~~-----~fD~Vv 358 (425)
T 2jjq_A 288 LVEGEKILDMYSGVGTFGIYLAKR---GFNVKGFDSNEFAIEMARRNVEINNVD-AEFEVASDREVSVK-----GFDTVI 358 (425)
T ss_dssp HCCSSEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCC-EEEEECCTTTCCCT-----TCSEEE
T ss_pred cCCCCEEEEeeccchHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChHHcCcc-----CCCEEE
Confidence 567899999999999999999885 368999999999999999999999998 99999999887532 699999
Q ss_pred ECCCCCCc
Q 019692 215 LDPSCSGS 222 (337)
Q Consensus 215 vDpPCSg~ 222 (337)
+|||++|.
T Consensus 359 ~dPPr~g~ 366 (425)
T 2jjq_A 359 VDPPRAGL 366 (425)
T ss_dssp ECCCTTCS
T ss_pred EcCCccch
Confidence 99997754
No 47
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.43 E-value=5.6e-13 Score=114.91 Aligned_cols=82 Identities=18% Similarity=0.267 Sum_probs=69.8
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.++++++.+|+.+++++++|+.++..... ..+||+|++
T Consensus 43 ~~~~~vLDlgcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~fD~i~~ 119 (189)
T 3p9n_A 43 LTGLAVLDLYAGSGALGLEALSR--GAASVLFVESDQRSAAVIARNIEALGLSGATLRRGAVAAVVAAGT-TSPVDLVLA 119 (189)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEESCHHHHHHHCC-SSCCSEEEE
T ss_pred CCCCEEEEeCCCcCHHHHHHHHC--CCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEccHHHHHhhcc-CCCccEEEE
Confidence 57899999999999999987774 456899999999999999999999999889999999887643211 257999999
Q ss_pred CCCCC
Q 019692 216 DPSCS 220 (337)
Q Consensus 216 DpPCS 220 (337)
|||..
T Consensus 120 ~~p~~ 124 (189)
T 3p9n_A 120 DPPYN 124 (189)
T ss_dssp CCCTT
T ss_pred CCCCC
Confidence 99944
No 48
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.42 E-value=2.7e-13 Score=120.63 Aligned_cols=124 Identities=10% Similarity=0.075 Sum_probs=94.1
Q ss_pred EechhhHHHHHHh---CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC--cEEEEec
Q 019692 121 LQGKASSMVAAAL---APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA--NIEVLHG 195 (337)
Q Consensus 121 ~Qd~ss~l~~~~l---~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~--~v~~~~~ 195 (337)
++.....+...++ .++++.+|||+|||+|..+..++..+++.++|+++|+++.+++.+++++++.|+. +|+++++
T Consensus 37 i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g 116 (221)
T 3dr5_A 37 PDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS 116 (221)
T ss_dssp CCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc
Confidence 3444444444443 3444559999999999999999998876789999999999999999999999987 6999999
Q ss_pred cCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEE
Q 019692 196 DFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVV 274 (337)
Q Consensus 196 D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lv 274 (337)
|+.+..+... .++||+|++|++... ....++.+.+++++ |.++
T Consensus 117 da~~~l~~~~-~~~fD~V~~d~~~~~-----------------------------------~~~~l~~~~~~LkpGG~lv 160 (221)
T 3dr5_A 117 RPLDVMSRLA-NDSYQLVFGQVSPMD-----------------------------------LKALVDAAWPLLRRGGALV 160 (221)
T ss_dssp CHHHHGGGSC-TTCEEEEEECCCTTT-----------------------------------HHHHHHHHHHHEEEEEEEE
T ss_pred CHHHHHHHhc-CCCcCeEEEcCcHHH-----------------------------------HHHHHHHHHHHcCCCcEEE
Confidence 9877643321 257999999976210 13467778888887 7777
Q ss_pred EEcCCC
Q 019692 275 YSTCSI 280 (337)
Q Consensus 275 YsTCS~ 280 (337)
+..+.+
T Consensus 161 ~dn~~~ 166 (221)
T 3dr5_A 161 LADALL 166 (221)
T ss_dssp ETTTTG
T ss_pred EeCCCC
Confidence 766655
No 49
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.42 E-value=5.7e-13 Score=127.61 Aligned_cols=155 Identities=16% Similarity=0.189 Sum_probs=110.6
Q ss_pred hhhhcCeEEEechh------hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh
Q 019692 112 PLIVNGCVFLQGKA------SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS 185 (337)
Q Consensus 112 ~~~~~G~~~~Qd~s------s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~ 185 (337)
..++.|+-..|..+ +..+...+ ..++.+|||+|||+|+.+..++... ..++|+|+|+|+.+++.+++|++..
T Consensus 187 ~l~~rgyr~~~~~a~l~~~la~~l~~~~-~~~~~~vLD~gCGsG~~~i~~a~~~-~~~~v~g~Dis~~~l~~A~~n~~~~ 264 (373)
T 3tm4_A 187 SLHKRPWRVYDHPAHLKASIANAMIELA-ELDGGSVLDPMCGSGTILIELALRR-YSGEIIGIEKYRKHLIGAEMNALAA 264 (373)
T ss_dssp CTTCCTTCCSCCTTCCCHHHHHHHHHHH-TCCSCCEEETTCTTCHHHHHHHHTT-CCSCEEEEESCHHHHHHHHHHHHHT
T ss_pred ccccCCcccccCCCCccHHHHHHHHHhh-cCCCCEEEEccCcCcHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHHHHHc
Confidence 45566654444322 23333444 7889999999999999999998863 3358999999999999999999999
Q ss_pred CC-CcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHH
Q 019692 186 GA-ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHA 264 (337)
Q Consensus 186 g~-~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A 264 (337)
|+ ++|+++++|+.+++... ++||+|++|||..- +. .....+..++..+++.+
T Consensus 265 gl~~~i~~~~~D~~~~~~~~---~~fD~Ii~npPyg~------r~------------------~~~~~~~~ly~~~~~~l 317 (373)
T 3tm4_A 265 GVLDKIKFIQGDATQLSQYV---DSVDFAISNLPYGL------KI------------------GKKSMIPDLYMKFFNEL 317 (373)
T ss_dssp TCGGGCEEEECCGGGGGGTC---SCEEEEEEECCCC------------------------------CCHHHHHHHHHHHH
T ss_pred CCCCceEEEECChhhCCccc---CCcCEEEECCCCCc------cc------------------CcchhHHHHHHHHHHHH
Confidence 98 57999999999886432 57999999999531 10 00112445677888888
Q ss_pred hCCCCCcEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEec
Q 019692 265 LSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 265 ~~~~~~G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~~ 305 (337)
.+.+ +|.++|.||+ ...+++.+. ..||+...
T Consensus 318 ~r~l-~g~~~~i~~~------~~~~~~~~~---~~G~~~~~ 348 (373)
T 3tm4_A 318 AKVL-EKRGVFITTE------KKAIEEAIA---ENGFEIIH 348 (373)
T ss_dssp HHHE-EEEEEEEESC------HHHHHHHHH---HTTEEEEE
T ss_pred HHHc-CCeEEEEECC------HHHHHHHHH---HcCCEEEE
Confidence 7766 6889999884 444555552 34677654
No 50
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.41 E-value=3.4e-13 Score=127.39 Aligned_cols=100 Identities=20% Similarity=0.211 Sum_probs=85.8
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
.+|.+|||+|||+|..++. +. +..+|+++|+|+.+++.+++|++.+|+ ++++++++|+.++. .+||+|+
T Consensus 194 ~~~~~VLDlg~G~G~~~l~-a~---~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~------~~fD~Vi 263 (336)
T 2yx1_A 194 SLNDVVVDMFAGVGPFSIA-CK---NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD------VKGNRVI 263 (336)
T ss_dssp CTTCEEEETTCTTSHHHHH-TT---TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC------CCEEEEE
T ss_pred CCCCEEEEccCccCHHHHh-cc---CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc------CCCcEEE
Confidence 5789999999999999988 66 357999999999999999999999998 57999999998775 4699999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
+|||..+. +++..+++++++ |.++|++|+..
T Consensus 264 ~dpP~~~~------------------------------------~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 264 MNLPKFAH------------------------------------KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp ECCTTTGG------------------------------------GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred ECCcHhHH------------------------------------HHHHHHHHHcCCCCEEEEEEeecC
Confidence 99996532 356677777765 89999999987
No 51
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.40 E-value=6.4e-13 Score=122.64 Aligned_cols=99 Identities=19% Similarity=0.238 Sum_probs=79.4
Q ss_pred EEEechhhHHHHHHh---CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEe
Q 019692 119 VFLQGKASSMVAAAL---APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLH 194 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l---~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~ 194 (337)
++.+.....++..++ ...++.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.+++|++++|+.+ |++++
T Consensus 102 lipr~~te~lv~~~l~~~~~~~~~~vLDlG~GsG~~~~~la~~--~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~ 179 (284)
T 1nv8_A 102 FVPRPETEELVELALELIRKYGIKTVADIGTGSGAIGVSVAKF--SDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRK 179 (284)
T ss_dssp CCCCTTHHHHHHHHHHHHHHHTCCEEEEESCTTSHHHHHHHHH--SSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEE
T ss_pred eecChhHHHHHHHHHHHhcccCCCEEEEEeCchhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEE
Confidence 334444444443333 2346789999999999999999988 56899999999999999999999999976 99999
Q ss_pred ccCCCCCCCCCCCCCc---cEEEECCCCCCccc
Q 019692 195 GDFLNLDPKDPAYSEV---RAILLDPSCSGSGT 224 (337)
Q Consensus 195 ~D~~~~~~~~~~~~~f---D~IlvDpPCSg~G~ 224 (337)
+|+.+... ++| |+|++||||.+.+.
T Consensus 180 ~D~~~~~~-----~~f~~~D~IvsnPPyi~~~~ 207 (284)
T 1nv8_A 180 GEFLEPFK-----EKFASIEMILSNPPYVKSSA 207 (284)
T ss_dssp SSTTGGGG-----GGTTTCCEEEECCCCBCGGG
T ss_pred Ccchhhcc-----cccCCCCEEEEcCCCCCccc
Confidence 99987432 356 99999999998875
No 52
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.39 E-value=2.5e-12 Score=113.38 Aligned_cols=82 Identities=24% Similarity=0.204 Sum_probs=65.4
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
+.+++|++|||+|||+|..+.+++...+ .++|+|+|+|+.+++.+.+.+++. .|+.++.+|+.......+..++||+
T Consensus 53 ~~~~~g~~VLDlGcGtG~~~~~la~~~~-~~~V~gvD~s~~~l~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~fD~ 129 (210)
T 1nt2_A 53 LKLRGDERVLYLGAASGTTVSHLADIVD-EGIIYAVEYSAKPFEKLLELVRER--NNIIPLLFDASKPWKYSGIVEKVDL 129 (210)
T ss_dssp CCCCSSCEEEEETCTTSHHHHHHHHHTT-TSEEEEECCCHHHHHHHHHHHHHC--SSEEEECSCTTCGGGTTTTCCCEEE
T ss_pred cCCCCCCEEEEECCcCCHHHHHHHHHcC-CCEEEEEECCHHHHHHHHHHHhcC--CCeEEEEcCCCCchhhcccccceeE
Confidence 3467899999999999999999999875 689999999999998888777654 5789999998764211111257999
Q ss_pred EEECC
Q 019692 213 ILLDP 217 (337)
Q Consensus 213 IlvDp 217 (337)
|++|.
T Consensus 130 V~~~~ 134 (210)
T 1nt2_A 130 IYQDI 134 (210)
T ss_dssp EEECC
T ss_pred EEEec
Confidence 99983
No 53
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.38 E-value=5.7e-13 Score=119.00 Aligned_cols=122 Identities=11% Similarity=0.129 Sum_probs=97.6
Q ss_pred CeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEec
Q 019692 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHG 195 (337)
Q Consensus 117 G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~ 195 (337)
+...++.....++..++...++.+|||+|||+|..+..++... +.++|+++|+++.+++.+++++++.|+. +|+++.+
T Consensus 51 ~~~~~~~~~~~~l~~~~~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 129 (232)
T 3ntv_A 51 EVPIVDRLTLDLIKQLIRMNNVKNILEIGTAIGYSSMQFASIS-DDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEG 129 (232)
T ss_dssp TCCCCCHHHHHHHHHHHHHHTCCEEEEECCSSSHHHHHHHTTC-TTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCEEEEEeCchhHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC
Confidence 4445566667777777777788999999999999999999853 4689999999999999999999999985 7999999
Q ss_pred cCCCCCC-CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEE
Q 019692 196 DFLNLDP-KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERV 273 (337)
Q Consensus 196 D~~~~~~-~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~l 273 (337)
|+.+..+ .. .++||+|++|+++.. +..+++.+.+++++ |.+
T Consensus 130 d~~~~~~~~~--~~~fD~V~~~~~~~~-----------------------------------~~~~l~~~~~~LkpgG~l 172 (232)
T 3ntv_A 130 NALEQFENVN--DKVYDMIFIDAAKAQ-----------------------------------SKKFFEIYTPLLKHQGLV 172 (232)
T ss_dssp CGGGCHHHHT--TSCEEEEEEETTSSS-----------------------------------HHHHHHHHGGGEEEEEEE
T ss_pred CHHHHHHhhc--cCCccEEEEcCcHHH-----------------------------------HHHHHHHHHHhcCCCeEE
Confidence 9987643 22 257999999976332 24578888898887 666
Q ss_pred EEE
Q 019692 274 VYS 276 (337)
Q Consensus 274 vYs 276 (337)
++.
T Consensus 173 v~d 175 (232)
T 3ntv_A 173 ITD 175 (232)
T ss_dssp EEE
T ss_pred EEe
Confidence 663
No 54
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.38 E-value=8.2e-13 Score=115.55 Aligned_cols=79 Identities=13% Similarity=0.182 Sum_probs=67.5
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
++.+|||+|||+|..+..++.. +..+|+++|+|+.+++.+++|++.+|+.+++++++|+.+..+.. ..+||+|++|
T Consensus 54 ~~~~vLDlgcG~G~~~~~l~~~--~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D~~~~~~~~--~~~fD~V~~~ 129 (202)
T 2fpo_A 54 VDAQCLDCFAGSGALGLEALSR--YAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSNAMSFLAQK--GTPHNIVFVD 129 (202)
T ss_dssp TTCEEEETTCTTCHHHHHHHHT--TCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCHHHHHSSC--CCCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHhc--CCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECCHHHHHhhc--CCCCCEEEEC
Confidence 6889999999999999987764 23589999999999999999999999988999999987743222 2579999999
Q ss_pred CCC
Q 019692 217 PSC 219 (337)
Q Consensus 217 pPC 219 (337)
||.
T Consensus 130 ~p~ 132 (202)
T 2fpo_A 130 PPF 132 (202)
T ss_dssp CSS
T ss_pred CCC
Confidence 993
No 55
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.38 E-value=4.5e-14 Score=127.32 Aligned_cols=152 Identities=11% Similarity=0.123 Sum_probs=109.9
Q ss_pred eEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEecc
Q 019692 118 CVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGD 196 (337)
Q Consensus 118 ~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D 196 (337)
.+.++.....++..++...++.+|||+|||+|..|..+|..+.+.++|+++|+++.+++.+++++++.|+. +|+++.+|
T Consensus 41 ~~~i~~~~~~~l~~l~~~~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gd 120 (242)
T 3r3h_A 41 NMQVAPEQAQFMQMLIRLTRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGP 120 (242)
T ss_dssp GTSCCHHHHHHHHHHHHHHTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESC
T ss_pred CCccCHHHHHHHHHHHhhcCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcC
Confidence 34566777777777777677889999999999999999998866789999999999999999999999986 69999999
Q ss_pred CCCCCCCCC---CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cE
Q 019692 197 FLNLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ER 272 (337)
Q Consensus 197 ~~~~~~~~~---~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~ 272 (337)
+.+..+... ..++||+|++|++... ....++.+.+++++ |.
T Consensus 121 a~~~l~~~~~~~~~~~fD~V~~d~~~~~-----------------------------------~~~~l~~~~~~LkpGG~ 165 (242)
T 3r3h_A 121 ALDTLHSLLNEGGEHQFDFIFIDADKTN-----------------------------------YLNYYELALKLVTPKGL 165 (242)
T ss_dssp HHHHHHHHHHHHCSSCEEEEEEESCGGG-----------------------------------HHHHHHHHHHHEEEEEE
T ss_pred HHHHHHHHhhccCCCCEeEEEEcCChHH-----------------------------------hHHHHHHHHHhcCCCeE
Confidence 876533210 0157999999987210 13467778888887 77
Q ss_pred EEEEcCCC-----CcccC---HHHHHHHhch-hcCCCcEEe
Q 019692 273 VVYSTCSI-----HQVEN---EDVIKSVLPI-AMSFGFQLA 304 (337)
Q Consensus 273 lvYsTCS~-----~~~EN---e~vv~~~l~~-~~~~~~~~~ 304 (337)
||+..+.+ .+..+ ...+..|.+. ..++.|+..
T Consensus 166 lv~d~~~~~g~v~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 206 (242)
T 3r3h_A 166 IAIDNIFWDGKVIDPNDTSGQTREIKKLNQVIKNDSRVFVS 206 (242)
T ss_dssp EEEECSSSSSCSSCTTCCCHHHHHHHHHHHHHHTCCSEEEE
T ss_pred EEEECCccCCcccCccccChHHHHHHHHHHHHhhCCCEEEE
Confidence 77654432 23333 2335555532 246667653
No 56
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.38 E-value=8.9e-13 Score=114.60 Aligned_cols=122 Identities=17% Similarity=0.201 Sum_probs=89.9
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC------C--C
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD------P--A 206 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~------~--~ 206 (337)
+++|.+|||+|||||+++..+++. .++|+|+|+++.. ...+|+++++|+.+..... . .
T Consensus 23 ~~~g~~VLDlG~G~G~~s~~la~~---~~~V~gvD~~~~~-----------~~~~v~~~~~D~~~~~~~~~~~~~~~~~~ 88 (191)
T 3dou_A 23 VRKGDAVIEIGSSPGGWTQVLNSL---ARKIISIDLQEME-----------EIAGVRFIRCDIFKETIFDDIDRALREEG 88 (191)
T ss_dssp SCTTCEEEEESCTTCHHHHHHTTT---CSEEEEEESSCCC-----------CCTTCEEEECCTTSSSHHHHHHHHHHHHT
T ss_pred CCCCCEEEEEeecCCHHHHHHHHc---CCcEEEEeccccc-----------cCCCeEEEEccccCHHHHHHHHHHhhccc
Confidence 578999999999999999999886 5899999999742 3467999999998753110 0 0
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccC
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVEN 285 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~EN 285 (337)
.++||+|++|+++..+|.. ..+......++..+|+.|.++|++ |.+| |.+...++
T Consensus 89 ~~~~D~Vlsd~~~~~~g~~---------------------~~d~~~~~~l~~~~l~~a~~~LkpGG~lv---~k~~~~~~ 144 (191)
T 3dou_A 89 IEKVDDVVSDAMAKVSGIP---------------------SRDHAVSYQIGQRVMEIAVRYLRNGGNVL---LKQFQGDM 144 (191)
T ss_dssp CSSEEEEEECCCCCCCSCH---------------------HHHHHHHHHHHHHHHHHHHHHEEEEEEEE---EEEECSTH
T ss_pred CCcceEEecCCCcCCCCCc---------------------ccCHHHHHHHHHHHHHHHHHHccCCCEEE---EEEcCCCC
Confidence 0379999999998777642 222334556788999999998887 7776 44555666
Q ss_pred HHHHHHHhc
Q 019692 286 EDVIKSVLP 294 (337)
Q Consensus 286 e~vv~~~l~ 294 (337)
...+...++
T Consensus 145 ~~~~~~~l~ 153 (191)
T 3dou_A 145 TNDFIAIWR 153 (191)
T ss_dssp HHHHHHHHG
T ss_pred HHHHHHHHH
Confidence 666666663
No 57
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.37 E-value=1.1e-12 Score=119.33 Aligned_cols=135 Identities=16% Similarity=0.215 Sum_probs=94.4
Q ss_pred hhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH---hCCC-cEEEEeccCCC
Q 019692 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL---SGAA-NIEVLHGDFLN 199 (337)
Q Consensus 124 ~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~---~g~~-~v~~~~~D~~~ 199 (337)
..+.+++.++...++.+|||+|||+|..++.++... +..+|+++|+++.+++.+++|++. +|+. +++++++|+.+
T Consensus 23 ~D~~lL~~~~~~~~~~~VLDlG~G~G~~~l~la~~~-~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~ 101 (260)
T 2ozv_A 23 MDAMLLASLVADDRACRIADLGAGAGAAGMAVAARL-EKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTL 101 (260)
T ss_dssp CHHHHHHHTCCCCSCEEEEECCSSSSHHHHHHHHHC-TTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTC
T ss_pred cHHHHHHHHhcccCCCEEEEeCChHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHH
Confidence 357788888888889999999999999999999985 347999999999999999999998 8886 49999999988
Q ss_pred CCC----CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHH--HHHHHHHHHHHHHhCCCCC-cE
Q 019692 200 LDP----KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLN--KLSAFQKKALRHALSFPGV-ER 272 (337)
Q Consensus 200 ~~~----~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~--~l~~~Q~~lL~~A~~~~~~-G~ 272 (337)
+.. ......+||+|++|||+...+ -...++.. ..+. ........+++.+.+++++ |.
T Consensus 102 ~~~~~~~~~~~~~~fD~Vv~nPPy~~~~-~~~~~~~~---------------~~~a~~~~~~~~~~~l~~~~~~LkpgG~ 165 (260)
T 2ozv_A 102 RAKARVEAGLPDEHFHHVIMNPPYNDAG-DRRTPDAL---------------KAEAHAMTEGLFEDWIRTASAIMVSGGQ 165 (260)
T ss_dssp CHHHHHHTTCCTTCEEEEEECCCC-------------------------------------CCHHHHHHHHHHHEEEEEE
T ss_pred HhhhhhhhccCCCCcCEEEECCCCcCCC-CCCCcCHH---------------HHHHhhcCcCCHHHHHHHHHHHcCCCCE
Confidence 721 000125799999999987653 11111110 0000 0111246788999898887 66
Q ss_pred EEE
Q 019692 273 VVY 275 (337)
Q Consensus 273 lvY 275 (337)
++.
T Consensus 166 l~~ 168 (260)
T 2ozv_A 166 LSL 168 (260)
T ss_dssp EEE
T ss_pred EEE
Confidence 655
No 58
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.37 E-value=4.5e-13 Score=117.45 Aligned_cols=123 Identities=11% Similarity=0.128 Sum_probs=95.4
Q ss_pred EEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCC
Q 019692 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFL 198 (337)
Q Consensus 120 ~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~ 198 (337)
.++.....+...++...++.+|||+|||+|..+..++..+.+.++|+++|+++.+++.+++++++.|+. +|+++.+|+.
T Consensus 39 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 118 (210)
T 3c3p_A 39 IVDRQTGRLLYLLARIKQPQLVVVPGDGLGCASWWFARAISISSRVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPL 118 (210)
T ss_dssp CCCHHHHHHHHHHHHHHCCSEEEEESCGGGHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHH
Confidence 455555555555555556789999999999999999998754689999999999999999999999885 4999999987
Q ss_pred CCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 199 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
+..+... + ||+|++|+++.. +..+++.+.+++++ |.+++.+
T Consensus 119 ~~~~~~~--~-fD~v~~~~~~~~-----------------------------------~~~~l~~~~~~LkpgG~lv~~~ 160 (210)
T 3c3p_A 119 GIAAGQR--D-IDILFMDCDVFN-----------------------------------GADVLERMNRCLAKNALLIAVN 160 (210)
T ss_dssp HHHTTCC--S-EEEEEEETTTSC-----------------------------------HHHHHHHHGGGEEEEEEEEEES
T ss_pred HHhccCC--C-CCEEEEcCChhh-----------------------------------hHHHHHHHHHhcCCCeEEEEEC
Confidence 6533222 5 999999965321 24678888888887 7888766
Q ss_pred CCC
Q 019692 278 CSI 280 (337)
Q Consensus 278 CS~ 280 (337)
+.+
T Consensus 161 ~~~ 163 (210)
T 3c3p_A 161 ALR 163 (210)
T ss_dssp SSS
T ss_pred ccc
Confidence 544
No 59
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.37 E-value=5.2e-13 Score=119.84 Aligned_cols=127 Identities=15% Similarity=0.088 Sum_probs=98.2
Q ss_pred EEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCC
Q 019692 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFL 198 (337)
Q Consensus 120 ~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~ 198 (337)
.++.....++..++...++.+|||+|||+|+.+..++..+.+.++|+++|+++.+++.+++++++.|+. +|+++.+|+.
T Consensus 53 ~~~~~~~~~l~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~ 132 (237)
T 3c3y_A 53 STSPLAGQLMSFVLKLVNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAM 132 (237)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred CcCHHHHHHHHHHHHhhCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 345555666666666667889999999999999999998866789999999999999999999999986 4999999987
Q ss_pred CCCCCC--C--CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEE
Q 019692 199 NLDPKD--P--AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERV 273 (337)
Q Consensus 199 ~~~~~~--~--~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~l 273 (337)
+..+.. . ..++||+|++|+++.. +...++.+.+++++ |.+
T Consensus 133 ~~l~~l~~~~~~~~~fD~I~~d~~~~~-----------------------------------~~~~l~~~~~~L~pGG~l 177 (237)
T 3c3y_A 133 LALDNLLQGQESEGSYDFGFVDADKPN-----------------------------------YIKYHERLMKLVKVGGIV 177 (237)
T ss_dssp HHHHHHHHSTTCTTCEEEEEECSCGGG-----------------------------------HHHHHHHHHHHEEEEEEE
T ss_pred HHHHHHHhccCCCCCcCEEEECCchHH-----------------------------------HHHHHHHHHHhcCCCeEE
Confidence 642211 0 0257999999976321 24567777787776 888
Q ss_pred EEEcCCCC
Q 019692 274 VYSTCSIH 281 (337)
Q Consensus 274 vYsTCS~~ 281 (337)
++.+|.+.
T Consensus 178 v~d~~~~~ 185 (237)
T 3c3y_A 178 AYDNTLWG 185 (237)
T ss_dssp EEECTTGG
T ss_pred EEecCCcC
Confidence 88887543
No 60
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.36 E-value=2.7e-12 Score=117.21 Aligned_cols=95 Identities=18% Similarity=0.257 Sum_probs=80.4
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh-C--CCcEEEEeccC
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-G--AANIEVLHGDF 197 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~-g--~~~v~~~~~D~ 197 (337)
+.......+...+++.++.+|||+|||+|..+..++..+++.++|+++|+++.+++.++++++.. | ..+++++++|+
T Consensus 83 ~~~~~~~~i~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~ 162 (280)
T 1i9g_A 83 IYPKDAAQIVHEGDIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDL 162 (280)
T ss_dssp CCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCG
T ss_pred ecHHHHHHHHHHcCCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECch
Confidence 34444556667788899999999999999999999998766789999999999999999999988 7 67899999999
Q ss_pred CCCCCCCCCCCCccEEEECCC
Q 019692 198 LNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 198 ~~~~~~~~~~~~fD~IlvDpP 218 (337)
.+.+.. ..+||+|++|+|
T Consensus 163 ~~~~~~---~~~~D~v~~~~~ 180 (280)
T 1i9g_A 163 ADSELP---DGSVDRAVLDML 180 (280)
T ss_dssp GGCCCC---TTCEEEEEEESS
T ss_pred HhcCCC---CCceeEEEECCc
Confidence 876432 257999999877
No 61
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.36 E-value=6.6e-13 Score=123.46 Aligned_cols=96 Identities=20% Similarity=0.204 Sum_probs=78.8
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~ 198 (337)
|..++.....++..+.+.++++|||+|||+|..|..++.. .++|+|+|+++.+++.++++++..|..+++++++|+.
T Consensus 24 fl~~~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~La~~---~~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D~~ 100 (299)
T 2h1r_A 24 LLKNPGILDKIIYAAKIKSSDIVLEIGCGTGNLTVKLLPL---AKKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGDAI 100 (299)
T ss_dssp EECCHHHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHTTT---SSEEEEECSCHHHHHHHHHHHHHTTCCCEEC----CC
T ss_pred eecCHHHHHHHHHhcCCCCcCEEEEEcCcCcHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECchh
Confidence 4556666777778888889999999999999999998875 3699999999999999999999888888999999998
Q ss_pred CCCCCCCCCCCccEEEECCCCCCc
Q 019692 199 NLDPKDPAYSEVRAILLDPSCSGS 222 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPCSg~ 222 (337)
.++. .+||.|++|+|+..+
T Consensus 101 ~~~~-----~~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 101 KTVF-----PKFDVCTANIPYKIS 119 (299)
T ss_dssp SSCC-----CCCSEEEEECCGGGH
T ss_pred hCCc-----ccCCEEEEcCCcccc
Confidence 7752 469999999997643
No 62
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.35 E-value=5e-12 Score=110.44 Aligned_cols=97 Identities=21% Similarity=0.183 Sum_probs=83.9
Q ss_pred cCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec
Q 019692 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG 195 (337)
Q Consensus 116 ~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~ 195 (337)
.|.+..+......+...+.++++.+|||+|||+|..+..++.. .++|+++|+++.+++.++++++.+|+.+++++.+
T Consensus 56 ~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 132 (210)
T 3lbf_A 56 QGQTISQPYMVARMTELLELTPQSRVLEIGTGSGYQTAILAHL---VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHG 132 (210)
T ss_dssp TSCEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES
T ss_pred CCCEeCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEEC
Confidence 3556667766777778888999999999999999999999997 4799999999999999999999999989999999
Q ss_pred cCCCCCCCCCCCCCccEEEECCC
Q 019692 196 DFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 196 D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
|+.+.... ..+||+|+++..
T Consensus 133 d~~~~~~~---~~~~D~i~~~~~ 152 (210)
T 3lbf_A 133 DGWQGWQA---RAPFDAIIVTAA 152 (210)
T ss_dssp CGGGCCGG---GCCEEEEEESSB
T ss_pred CcccCCcc---CCCccEEEEccc
Confidence 99876543 257999999865
No 63
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.35 E-value=5.1e-12 Score=113.23 Aligned_cols=130 Identities=10% Similarity=0.027 Sum_probs=96.2
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++++|+.+|+++++|+.+++......++||+|
T Consensus 67 ~~~~~~~vLDiG~G~G~~~~~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V 145 (240)
T 1xdz_A 67 DFNQVNTICDVGAGAGFPSLPIKICF-PHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIV 145 (240)
T ss_dssp CGGGCCEEEEECSSSCTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEE
T ss_pred ccCCCCEEEEecCCCCHHHHHHHHhC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEE
Confidence 34578899999999999999999863 45799999999999999999999999988999999998765321012579999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHH
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSV 292 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~ 292 (337)
+++.. . + ...+++.+.+++++ |.+++..+....+|-+...+ .
T Consensus 146 ~~~~~-------~---~--------------------------~~~~l~~~~~~LkpgG~l~~~~g~~~~~~~~~~~~-~ 188 (240)
T 1xdz_A 146 TARAV-------A---R--------------------------LSVLSELCLPLVKKNGLFVALKAASAEEELNAGKK-A 188 (240)
T ss_dssp EEECC-------S---C--------------------------HHHHHHHHGGGEEEEEEEEEEECC-CHHHHHHHHH-H
T ss_pred EEecc-------C---C--------------------------HHHHHHHHHHhcCCCCEEEEEeCCCchHHHHHHHH-H
Confidence 98651 0 0 14788888888887 78887777665544433333 2
Q ss_pred hchhcCCCcEEe
Q 019692 293 LPIAMSFGFQLA 304 (337)
Q Consensus 293 l~~~~~~~~~~~ 304 (337)
+ ...||++.
T Consensus 189 l---~~~g~~~~ 197 (240)
T 1xdz_A 189 I---TTLGGELE 197 (240)
T ss_dssp H---HHTTEEEE
T ss_pred H---HHcCCeEe
Confidence 3 23466654
No 64
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.34 E-value=1.5e-13 Score=119.73 Aligned_cols=148 Identities=12% Similarity=0.101 Sum_probs=76.1
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-CCCCCCccEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAIL 214 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~~fD~Il 214 (337)
.++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++.+|. +++++++|+.+.... ....++||+|+
T Consensus 29 ~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~fD~i~ 106 (215)
T 4dzr_A 29 PSGTRVIDVGTGSGCIAVSIALAC-PGVSVTAVDLSMDALAVARRNAERFGA-VVDWAAADGIEWLIERAERGRPWHAIV 106 (215)
T ss_dssp CTTEEEEEEESSBCHHHHHHHHHC-TTEEEEEEECC--------------------CCHHHHHHHHHHHHHTTCCBSEEE
T ss_pred CCCCEEEEecCCHhHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHHHHHhCC-ceEEEEcchHhhhhhhhhccCcccEEE
Confidence 678999999999999999999984 346999999999999999999999888 799999998763221 00015799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHh
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVL 293 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l 293 (337)
+|||+...+.+..-+.... .+... . ....-..-.+....+++.+.+++++ |.+++.++.. .+...+..++
T Consensus 107 ~npp~~~~~~~~~~~~~~~-~~~~~--~---~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~---~~~~~~~~~l 177 (215)
T 4dzr_A 107 SNPPYIPTGEIDQLEPSVR-DYEPR--L---ALDGGEDGLQFYRRMAALPPYVLARGRAGVFLEVGH---NQADEVARLF 177 (215)
T ss_dssp ECCCCCC------------------------------CTTHHHHHHHTCCGGGBCSSSEEEEEECTT---SCHHHHHHHT
T ss_pred ECCCCCCCccccccChhhh-ccCcc--c---cccCCCcHHHHHHHHHHHHHHHhcCCCeEEEEEECC---ccHHHHHHHH
Confidence 9999977665422110000 00000 0 0000000112236788888888887 7746655542 3445556666
Q ss_pred c
Q 019692 294 P 294 (337)
Q Consensus 294 ~ 294 (337)
.
T Consensus 178 ~ 178 (215)
T 4dzr_A 178 A 178 (215)
T ss_dssp G
T ss_pred H
Confidence 3
No 65
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.34 E-value=1.1e-11 Score=108.78 Aligned_cols=141 Identities=20% Similarity=0.198 Sum_probs=105.6
Q ss_pred HHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC
Q 019692 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 127 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 206 (337)
..+...+.+.++.+|||+|||+|..+..++...++..+|+++|+++.+++.++++++..++.+++++.+|+.+++...
T Consensus 27 ~~~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~-- 104 (219)
T 3dh0_A 27 EKVLKEFGLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPD-- 104 (219)
T ss_dssp HHHHHHHTCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCS--
T ss_pred HHHHHHhCCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCC--
Confidence 344555678889999999999999999999987566799999999999999999999999989999999998876432
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcc--
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQV-- 283 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~-- 283 (337)
++||+|++... +..-++ ...+|+.+.+++++ |.++.+++.....
T Consensus 105 -~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~ 151 (219)
T 3dh0_A 105 -NTVDFIFMAFT------FHELSE--------------------------PLKFLEELKRVAKPFAYLAIIDWKKEERDK 151 (219)
T ss_dssp -SCEEEEEEESC------GGGCSS--------------------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSS
T ss_pred -CCeeEEEeehh------hhhcCC--------------------------HHHHHHHHHHHhCCCeEEEEEEeccccccc
Confidence 57999997532 211000 24678888888886 7888876554322
Q ss_pred -------cCHHHHHHHhchhcCCCcEEec
Q 019692 284 -------ENEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 284 -------ENe~vv~~~l~~~~~~~~~~~~ 305 (337)
-+.+.+...++ ..||+.+.
T Consensus 152 ~~~~~~~~~~~~~~~~l~---~~Gf~~~~ 177 (219)
T 3dh0_A 152 GPPPEEVYSEWEVGLILE---DAGIRVGR 177 (219)
T ss_dssp SCCGGGSCCHHHHHHHHH---HTTCEEEE
T ss_pred CCchhcccCHHHHHHHHH---HCCCEEEE
Confidence 23556666664 34677653
No 66
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.34 E-value=7.9e-13 Score=118.15 Aligned_cols=94 Identities=21% Similarity=0.337 Sum_probs=79.3
Q ss_pred hhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCC
Q 019692 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPK 203 (337)
Q Consensus 125 ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~ 203 (337)
...+...+....++.+|||+|||+|..+..++.. ..+|+|+|+++.+++.++++++.+|+ .+++++++|+.+++..
T Consensus 66 ~~~l~~~~~~~~~~~~vLD~gcG~G~~~~~la~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~ 142 (241)
T 3gdh_A 66 AEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALT---GMRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDFLLLASF 142 (241)
T ss_dssp HHHHHHHHHHHSCCSEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHGGG
T ss_pred HHHHHHHhhhccCCCEEEECccccCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECChHHhccc
Confidence 4444445544557999999999999999999985 37999999999999999999999998 5799999999887622
Q ss_pred CCCCCCccEEEECCCCCCcccc
Q 019692 204 DPAYSEVRAILLDPSCSGSGTA 225 (337)
Q Consensus 204 ~~~~~~fD~IlvDpPCSg~G~~ 225 (337)
.+||+|++||||.+.+..
T Consensus 143 ----~~~D~v~~~~~~~~~~~~ 160 (241)
T 3gdh_A 143 ----LKADVVFLSPPWGGPDYA 160 (241)
T ss_dssp ----CCCSEEEECCCCSSGGGG
T ss_pred ----CCCCEEEECCCcCCcchh
Confidence 579999999999987653
No 67
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.34 E-value=8.2e-12 Score=105.72 Aligned_cols=125 Identities=18% Similarity=0.202 Sum_probs=94.5
Q ss_pred HHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCC
Q 019692 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 127 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 205 (337)
..+...+.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++.+|+. ++ ++.+|+.+..+..
T Consensus 15 ~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~- 91 (178)
T 3hm2_A 15 ALAISALAPKPHETLWDIGGGSGSIAIEWLRST-PQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDV- 91 (178)
T ss_dssp HHHHHHHCCCTTEEEEEESTTTTHHHHHHHTTS-SSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGC-
T ss_pred HHHHHHhcccCCCeEEEeCCCCCHHHHHHHHHC-CCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhcc-
Confidence 444556678899999999999999999998875 4579999999999999999999999987 79 8888875432221
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCccc
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVE 284 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~E 284 (337)
.++||+|+++.+... ..+++.+.+++++ |.+++++++. +
T Consensus 92 -~~~~D~i~~~~~~~~------------------------------------~~~l~~~~~~L~~gG~l~~~~~~~---~ 131 (178)
T 3hm2_A 92 -PDNPDVIFIGGGLTA------------------------------------PGVFAAAWKRLPVGGRLVANAVTV---E 131 (178)
T ss_dssp -CSCCSEEEECC-TTC------------------------------------TTHHHHHHHTCCTTCEEEEEECSH---H
T ss_pred -CCCCCEEEECCcccH------------------------------------HHHHHHHHHhcCCCCEEEEEeecc---c
Confidence 157999997655211 2568888888886 8888877764 3
Q ss_pred CHHHHHHHhc
Q 019692 285 NEDVIKSVLP 294 (337)
Q Consensus 285 Ne~vv~~~l~ 294 (337)
+...+..+++
T Consensus 132 ~~~~~~~~~~ 141 (178)
T 3hm2_A 132 SEQMLWALRK 141 (178)
T ss_dssp HHHHHHHHHH
T ss_pred cHHHHHHHHH
Confidence 4445555553
No 68
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.34 E-value=1.3e-11 Score=105.40 Aligned_cols=119 Identities=15% Similarity=0.197 Sum_probs=94.6
Q ss_pred hhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc--EEEEeccCCCCC
Q 019692 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN--IEVLHGDFLNLD 201 (337)
Q Consensus 124 ~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~--v~~~~~D~~~~~ 201 (337)
..+..+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..++.+ ++++.+|+.+..
T Consensus 39 ~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~ 115 (194)
T 1dus_A 39 KGTKILVENVVVDKDDDILDLGCGYGVIGIALADE---VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV 115 (194)
T ss_dssp HHHHHHHHHCCCCTTCEEEEETCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC
T ss_pred hHHHHHHHHcccCCCCeEEEeCCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhccc
Confidence 45566677778888999999999999999988876 4799999999999999999999999987 999999988754
Q ss_pred CCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 202 ~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
. .++||+|++++|... .. .....+++.+.+++++ |.++.++++.
T Consensus 116 ~----~~~~D~v~~~~~~~~------------------------~~-------~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 116 K----DRKYNKIITNPPIRA------------------------GK-------EVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp T----TSCEEEEEECCCSTT------------------------CH-------HHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred c----cCCceEEEECCCccc------------------------ch-------hHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 3 257999999988321 01 1134678888887776 7777766654
No 69
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.33 E-value=6.5e-13 Score=117.36 Aligned_cols=126 Identities=10% Similarity=0.131 Sum_probs=96.3
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDF 197 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~ 197 (337)
..++.....++..++...++.+|||+|||+|..+..++..+.+.++|+++|+++.+++.++++++..|+.+ |+++++|+
T Consensus 46 ~~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 125 (225)
T 3tr6_A 46 MQTAPEQAQLLALLVKLMQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPA 125 (225)
T ss_dssp GSCCHHHHHHHHHHHHHHTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCH
T ss_pred cccCHHHHHHHHHHHHhhCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCH
Confidence 34555566666666666678999999999999999999987657899999999999999999999999875 99999998
Q ss_pred CCCCCCCC---CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEE
Q 019692 198 LNLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERV 273 (337)
Q Consensus 198 ~~~~~~~~---~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~l 273 (337)
.+..+... ..++||+|++|++... +..+++.+.+++++ |.+
T Consensus 126 ~~~~~~~~~~~~~~~fD~v~~~~~~~~-----------------------------------~~~~l~~~~~~L~pgG~l 170 (225)
T 3tr6_A 126 KDTLAELIHAGQAWQYDLIYIDADKAN-----------------------------------TDLYYEESLKLLREGGLI 170 (225)
T ss_dssp HHHHHHHHTTTCTTCEEEEEECSCGGG-----------------------------------HHHHHHHHHHHEEEEEEE
T ss_pred HHHHHHhhhccCCCCccEEEECCCHHH-----------------------------------HHHHHHHHHHhcCCCcEE
Confidence 65422110 0157999999987210 13567788888887 677
Q ss_pred EEEcCC
Q 019692 274 VYSTCS 279 (337)
Q Consensus 274 vYsTCS 279 (337)
+...+.
T Consensus 171 v~~~~~ 176 (225)
T 3tr6_A 171 AVDNVL 176 (225)
T ss_dssp EEECSS
T ss_pred EEeCCC
Confidence 665444
No 70
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.33 E-value=2.4e-11 Score=106.78 Aligned_cols=116 Identities=16% Similarity=0.071 Sum_probs=86.8
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++... +...|+|+|+++.+++.++++++..|+.|+.++++|+.+++...+ .++||.|++
T Consensus 40 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~-~~~~D~i~~ 117 (214)
T 1yzh_A 40 NDNPIHVEVGSGKGAFVSGMAKQN-PDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFE-DGEIDRLYL 117 (214)
T ss_dssp SCCCEEEEESCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSC-TTCCSEEEE
T ss_pred CCCCeEEEEccCcCHHHHHHHHHC-CCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC-CCCCCEEEE
Confidence 468899999999999999999985 457999999999999999999999999899999999988652111 257999999
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
++|..-.. .++ .+.+ ..+..++..+.+++++ |.++.+|
T Consensus 118 ~~~~~~~~--~~~-----------------~~~~-----~~~~~~l~~~~~~LkpgG~l~~~~ 156 (214)
T 1yzh_A 118 NFSDPWPK--KRH-----------------EKRR-----LTYKTFLDTFKRILPENGEIHFKT 156 (214)
T ss_dssp ESCCCCCS--GGG-----------------GGGS-----TTSHHHHHHHHHHSCTTCEEEEEE
T ss_pred ECCCCccc--cch-----------------hhhc-----cCCHHHHHHHHHHcCCCcEEEEEe
Confidence 98732110 000 0000 0146788888887887 6666544
No 71
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.33 E-value=7.5e-12 Score=119.93 Aligned_cols=137 Identities=11% Similarity=0.069 Sum_probs=98.7
Q ss_pred chhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC---cEEEEeccCCC
Q 019692 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA---NIEVLHGDFLN 199 (337)
Q Consensus 123 d~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~---~v~~~~~D~~~ 199 (337)
|..+.++...+...++.+|||+|||+|..+..++... +..+|+++|+|+.+++.+++|++.+|+. +++++.+|+.+
T Consensus 208 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~s~~la~~~-p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~ 286 (375)
T 4dcm_A 208 DIGARFFMQHLPENLEGEIVDLGCGNGVIGLTLLDKN-PQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALS 286 (375)
T ss_dssp CHHHHHHHHTCCCSCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTT
T ss_pred cHHHHHHHHhCcccCCCeEEEEeCcchHHHHHHHHHC-CCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhc
Confidence 4456677777887888999999999999999999974 4579999999999999999999999875 58999999887
Q ss_pred CCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 200 ~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
..+ .++||+|++|||......+.+ ....++++.+.+++++ |.++.+.-
T Consensus 287 ~~~----~~~fD~Ii~nppfh~~~~~~~---------------------------~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 287 GVE----PFRFNAVLCNPPFHQQHALTD---------------------------NVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp TCC----TTCEEEEEECCCC-------C---------------------------CHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCC----CCCeeEEEECCCcccCcccCH---------------------------HHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 432 257999999999643111100 0123678898888887 66655544
Q ss_pred CCCcccCHHHHHHHh
Q 019692 279 SIHQVENEDVIKSVL 293 (337)
Q Consensus 279 S~~~~ENe~vv~~~l 293 (337)
+..+. +..+++..
T Consensus 336 ~~~~~--~~~l~~~f 348 (375)
T 4dcm_A 336 RHLDY--FHKLKKIF 348 (375)
T ss_dssp TTSCH--HHHHHHHH
T ss_pred CCcCH--HHHHHHhc
Confidence 43333 33444443
No 72
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.33 E-value=1.9e-12 Score=116.95 Aligned_cols=124 Identities=16% Similarity=0.156 Sum_probs=95.8
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDF 197 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~ 197 (337)
..++.....++..++...++.+|||+|||+|+.+..++..+.+.++|+++|+++.+++.+++++++.|+. +|+++.+|+
T Consensus 61 ~~~~~~~~~ll~~l~~~~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda 140 (247)
T 1sui_A 61 MTTSADEGQFLSMLLKLINAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPA 140 (247)
T ss_dssp GSCCHHHHHHHHHHHHHTTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CCcCHHHHHHHHHHHHhhCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCH
Confidence 4456666667666666667889999999999999999998865689999999999999999999999984 699999998
Q ss_pred CCCCCCCC----CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cE
Q 019692 198 LNLDPKDP----AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ER 272 (337)
Q Consensus 198 ~~~~~~~~----~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~ 272 (337)
.+..+... ..++||+|++|+++.. ....++.+.+++++ |.
T Consensus 141 ~~~l~~l~~~~~~~~~fD~V~~d~~~~~-----------------------------------~~~~l~~~~~~LkpGG~ 185 (247)
T 1sui_A 141 LPVLDEMIKDEKNHGSYDFIFVDADKDN-----------------------------------YLNYHKRLIDLVKVGGV 185 (247)
T ss_dssp HHHHHHHHHSGGGTTCBSEEEECSCSTT-----------------------------------HHHHHHHHHHHBCTTCC
T ss_pred HHHHHHHHhccCCCCCEEEEEEcCchHH-----------------------------------HHHHHHHHHHhCCCCeE
Confidence 76422110 0157999999976321 13567777787776 78
Q ss_pred EEEEc
Q 019692 273 VVYST 277 (337)
Q Consensus 273 lvYsT 277 (337)
+++..
T Consensus 186 lv~d~ 190 (247)
T 1sui_A 186 IGYDN 190 (247)
T ss_dssp EEEEC
T ss_pred EEEec
Confidence 87754
No 73
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.32 E-value=1.6e-12 Score=120.85 Aligned_cols=92 Identities=17% Similarity=0.221 Sum_probs=77.6
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC--C
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD--P 205 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~--~ 205 (337)
.+...+.+++|++|||+|||+|+.+..+++..+ .++|+|+|+|+.+++.++++++.+| .+++++++|+.+++... .
T Consensus 17 e~l~~L~~~~g~~vLD~g~G~G~~s~~la~~~~-~~~VigvD~d~~al~~A~~~~~~~g-~~v~~v~~d~~~l~~~l~~~ 94 (301)
T 1m6y_A 17 EVIEFLKPEDEKIILDCTVGEGGHSRAILEHCP-GCRIIGIDVDSEVLRIAEEKLKEFS-DRVSLFKVSYREADFLLKTL 94 (301)
T ss_dssp HHHHHHCCCTTCEEEETTCTTSHHHHHHHHHCT-TCEEEEEESCHHHHHHHHHHTGGGT-TTEEEEECCGGGHHHHHHHT
T ss_pred HHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHCC-CCEEEEEECCHHHHHHHHHHHHhcC-CcEEEEECCHHHHHHHHHhc
Confidence 345667888999999999999999999999864 5899999999999999999999888 78999999998764210 0
Q ss_pred CCCCccEEEECCCCCC
Q 019692 206 AYSEVRAILLDPSCSG 221 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg 221 (337)
...+||.|++|+|||.
T Consensus 95 g~~~~D~Vl~D~gvSs 110 (301)
T 1m6y_A 95 GIEKVDGILMDLGVST 110 (301)
T ss_dssp TCSCEEEEEEECSCCH
T ss_pred CCCCCCEEEEcCccch
Confidence 1247999999999984
No 74
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.32 E-value=2.2e-11 Score=108.40 Aligned_cols=124 Identities=20% Similarity=0.239 Sum_probs=95.1
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
+.+|++|||+|||+|..++.++.. ++.++|+|+|+++.+++.+++|++++|+.+ |+++.+|..+..+.. .+||.|
T Consensus 13 v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~---~~~D~I 88 (225)
T 3kr9_A 13 VSQGAILLDVGSDHAYLPIELVER-GQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEET---DQVSVI 88 (225)
T ss_dssp SCTTEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG---GCCCEE
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccC---cCCCEE
Confidence 567899999999999999999886 445789999999999999999999999975 999999986543221 259999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHH
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSV 292 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~ 292 (337)
++ .|.|- .+=.+||..+...+++ |.+|.+.- .+.+.+...
T Consensus 89 vi----aG~Gg------------------------------~~i~~Il~~~~~~L~~~~~lVlq~~-----~~~~~vr~~ 129 (225)
T 3kr9_A 89 TI----AGMGG------------------------------RLIARILEEGLGKLANVERLILQPN-----NREDDLRIW 129 (225)
T ss_dssp EE----EEECH------------------------------HHHHHHHHHTGGGCTTCCEEEEEES-----SCHHHHHHH
T ss_pred EE----cCCCh------------------------------HHHHHHHHHHHHHhCCCCEEEEECC-----CCHHHHHHH
Confidence 86 24331 1124789998887776 88888655 377778777
Q ss_pred hchhcCCCcEEe
Q 019692 293 LPIAMSFGFQLA 304 (337)
Q Consensus 293 l~~~~~~~~~~~ 304 (337)
|. ..||.+.
T Consensus 130 L~---~~Gf~i~ 138 (225)
T 3kr9_A 130 LQ---DHGFQIV 138 (225)
T ss_dssp HH---HTTEEEE
T ss_pred HH---HCCCEEE
Confidence 74 3466664
No 75
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.32 E-value=1.1e-11 Score=105.06 Aligned_cols=117 Identities=14% Similarity=0.125 Sum_probs=92.6
Q ss_pred EEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCC
Q 019692 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN 199 (337)
Q Consensus 120 ~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~ 199 (337)
..++.-...+...+...++.+|||+|||+|..+..++. +..+|+++|+++.+++.++++++.+|+.+++++++|+.+
T Consensus 18 ~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~---~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~ 94 (183)
T 2yxd_A 18 ITKEEIRAVSIGKLNLNKDDVVVDVGCGSGGMTVEIAK---RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRAED 94 (183)
T ss_dssp CCCHHHHHHHHHHHCCCTTCEEEEESCCCSHHHHHHHT---TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCHHH
T ss_pred cCHHHHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHh---cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCccc
Confidence 34444455566667888899999999999999998887 457999999999999999999999999889999999876
Q ss_pred CCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCC
Q 019692 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCS 279 (337)
Q Consensus 200 ~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS 279 (337)
..+. .+||+|+++++ . . ...++..+.++ ++|.+++++|+
T Consensus 95 ~~~~----~~~D~i~~~~~----~----~----------------------------~~~~l~~~~~~-~gG~l~~~~~~ 133 (183)
T 2yxd_A 95 VLDK----LEFNKAFIGGT----K----N----------------------------IEKIIEILDKK-KINHIVANTIV 133 (183)
T ss_dssp HGGG----CCCSEEEECSC----S----C----------------------------HHHHHHHHHHT-TCCEEEEEESC
T ss_pred cccC----CCCcEEEECCc----c----c----------------------------HHHHHHHHhhC-CCCEEEEEecc
Confidence 3221 47999999987 1 0 13566676667 66999998875
Q ss_pred C
Q 019692 280 I 280 (337)
Q Consensus 280 ~ 280 (337)
.
T Consensus 134 ~ 134 (183)
T 2yxd_A 134 L 134 (183)
T ss_dssp H
T ss_pred c
Confidence 3
No 76
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.32 E-value=4.3e-12 Score=107.83 Aligned_cols=86 Identities=19% Similarity=0.207 Sum_probs=70.8
Q ss_pred HHHhC-CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCC
Q 019692 130 AAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAY 207 (337)
Q Consensus 130 ~~~l~-~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~ 207 (337)
...+. ..++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++..|+. +++++.+|+.+..+.. .
T Consensus 23 ~~~l~~~~~~~~vLDlGcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~--~ 98 (177)
T 2esr_A 23 FNMIGPYFNGGRVLDLFAGSGGLAIEAVSR--GMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKMEAERAIDCL--T 98 (177)
T ss_dssp HHHHCSCCCSCEEEEETCTTCHHHHHHHHT--TCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECSCHHHHHHHB--C
T ss_pred HHHHHhhcCCCeEEEeCCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcHHHhHHhh--c
Confidence 33444 567899999999999999998876 4479999999999999999999999885 6999999987742221 1
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
.+||+|++|||.
T Consensus 99 ~~fD~i~~~~~~ 110 (177)
T 2esr_A 99 GRFDLVFLDPPY 110 (177)
T ss_dssp SCEEEEEECCSS
T ss_pred CCCCEEEECCCC
Confidence 469999999995
No 77
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.31 E-value=5.5e-12 Score=114.11 Aligned_cols=116 Identities=16% Similarity=0.080 Sum_probs=91.6
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..++.+|||+|||+|..++.++... +..+|+++|+++.+++.++++++++|+.||+++++|+.++........+||+|+
T Consensus 78 ~~~~~~vLDiG~G~G~~~i~la~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~ 156 (249)
T 3g89_A 78 WQGPLRVLDLGTGAGFPGLPLKIVR-PELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAV 156 (249)
T ss_dssp CCSSCEEEEETCTTTTTHHHHHHHC-TTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEE
T ss_pred cCCCCEEEEEcCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEE
Confidence 3578999999999999999999875 558999999999999999999999999899999999988764311125799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHH
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENED 287 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~ 287 (337)
+..- .. ...+++.+.+++++ |.+++..+....+|-+.
T Consensus 157 s~a~-------~~-----------------------------~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~ 194 (249)
T 3g89_A 157 ARAV-------AP-----------------------------LCVLSELLLPFLEVGGAAVAMKGPRVEEELAP 194 (249)
T ss_dssp EESS-------CC-----------------------------HHHHHHHHGGGEEEEEEEEEEECSCCHHHHTT
T ss_pred ECCc-------CC-----------------------------HHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHH
Confidence 7421 00 13678888888887 88888777755544333
No 78
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.31 E-value=1.6e-11 Score=113.46 Aligned_cols=106 Identities=17% Similarity=0.209 Sum_probs=84.7
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
.++.+++|++|||+|||+|+.|..++... .+++|+++|+++.+++.+++++++.|+.+|+++++|+.+++ + .+|
T Consensus 116 ~la~l~~g~rVLDIGcG~G~~ta~~lA~~-~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~--d---~~F 189 (298)
T 3fpf_A 116 ALGRFRRGERAVFIGGGPLPLTGILLSHV-YGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID--G---LEF 189 (298)
T ss_dssp HHTTCCTTCEEEEECCCSSCHHHHHHHHT-TCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG--G---CCC
T ss_pred HHcCCCCcCEEEEECCCccHHHHHHHHHc-cCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC--C---CCc
Confidence 35788999999999999998775544332 25799999999999999999999999988999999998875 2 579
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
|+|+++.- . ++ ..++++...+.+++ |+||..+
T Consensus 190 DvV~~~a~------~---~d--------------------------~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 190 DVLMVAAL------A---EP--------------------------KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp SEEEECTT------C---SC--------------------------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CEEEECCC------c---cC--------------------------HHHHHHHHHHHcCCCcEEEEEc
Confidence 99998542 1 11 24778888887776 8888764
No 79
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.31 E-value=1.3e-11 Score=111.96 Aligned_cols=113 Identities=16% Similarity=0.177 Sum_probs=90.8
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
+.++.+|||+|||+|..+..++.. +.++|+++|+++.+++.++++++..|+.+ ++++++|+.+++... ++||+|
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~---~~fD~i 118 (267)
T 3kkz_A 44 LTEKSLIADIGCGTGGQTMVLAGH--VTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRN---EELDLI 118 (267)
T ss_dssp CCTTCEEEEETCTTCHHHHHHHTT--CSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT---TCEEEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHhc--cCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCC---CCEEEE
Confidence 578999999999999999999887 45699999999999999999999999854 999999998876432 679999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccC
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVEN 285 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~EN 285 (337)
++....... + ...+|+.+.+++++ |.++.+++++.....
T Consensus 119 ~~~~~~~~~-------~--------------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 158 (267)
T 3kkz_A 119 WSEGAIYNI-------G--------------------------FERGLNEWRKYLKKGGYLAVSECSWFTDER 158 (267)
T ss_dssp EESSCGGGT-------C--------------------------HHHHHHHHGGGEEEEEEEEEEEEEESSSCC
T ss_pred EEcCCceec-------C--------------------------HHHHHHHHHHHcCCCCEEEEEEeeecCCCC
Confidence 976542211 0 14678899898887 888888876554433
No 80
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.31 E-value=1.2e-11 Score=110.59 Aligned_cols=121 Identities=16% Similarity=0.175 Sum_probs=96.5
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~ 200 (337)
-|++++......+++.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..|+.++.++.+|+..+
T Consensus 5 ~~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~ 81 (239)
T 1xxl_A 5 HHHHSLGLMIKTAECRAEHRVLDIGAGAGHTALAFSPYV---QECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESL 81 (239)
T ss_dssp -CHHHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBC
T ss_pred ccCCCcchHHHHhCcCCCCEEEEEccCcCHHHHHHHHhC---CEEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccC
Confidence 477888999999999999999999999999999888763 59999999999999999999999998999999999887
Q ss_pred CCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 201 ~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
+..+ ++||+|++.-. +..-+| ...+|..+.+++++ |.++.++..
T Consensus 82 ~~~~---~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~~~~~ 126 (239)
T 1xxl_A 82 PFPD---DSFDIITCRYA------AHHFSD--------------------------VRKAVREVARVLKQDGRFLLVDHY 126 (239)
T ss_dssp CSCT---TCEEEEEEESC------GGGCSC--------------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCCC---CcEEEEEECCc------hhhccC--------------------------HHHHHHHHHHHcCCCcEEEEEEcC
Confidence 6432 57999997522 111000 14678888888887 777765543
No 81
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.30 E-value=1.7e-11 Score=117.68 Aligned_cols=122 Identities=16% Similarity=0.187 Sum_probs=94.1
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++.. ..+|+++|+|+.+++.+++|++.++++ ++++.+|+.+.... .++||+|++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~---g~~V~gvDis~~al~~A~~n~~~~~~~-v~~~~~D~~~~~~~---~~~fD~Ii~ 304 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARM---GAEVVGVEDDLASVLSLQKGLEANALK-AQALHSDVDEALTE---EARFDIIVT 304 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHT---TCEEEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTSCT---TCCEEEEEE
T ss_pred CCCCEEEEEeeeCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHcCCC-eEEEEcchhhcccc---CCCeEEEEE
Confidence 47889999999999999999886 369999999999999999999999876 89999999887643 257999999
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHh
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVL 293 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l 293 (337)
|||+...+... . .....++..+.+++++ |.++.+++...+. +..++...
T Consensus 305 npp~~~~~~~~--------------------~-------~~~~~~l~~~~~~LkpGG~l~iv~n~~l~~--~~~l~~~f 354 (381)
T 3dmg_A 305 NPPFHVGGAVI--------------------L-------DVAQAFVNVAAARLRPGGVFFLVSNPFLKY--EPLLEEKF 354 (381)
T ss_dssp CCCCCTTCSSC--------------------C-------HHHHHHHHHHHHHEEEEEEEEEEECTTSCH--HHHHHHHH
T ss_pred CCchhhccccc--------------------H-------HHHHHHHHHHHHhcCcCcEEEEEEcCCCCh--HHHHHHhh
Confidence 99976432110 0 1235788888888887 7777777666543 34444433
No 82
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.30 E-value=2.7e-11 Score=108.78 Aligned_cols=115 Identities=13% Similarity=0.037 Sum_probs=90.6
Q ss_pred HHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCC
Q 019692 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 127 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 205 (337)
..+...+.+.++.+|||+|||+|..+..++... ..+|+++|+++.+++.++++++..|+. +|.++++|+.+++. .
T Consensus 26 ~~l~~~~~~~~~~~VLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~- 101 (256)
T 1nkv_A 26 ATLGRVLRMKPGTRILDLGSGSGEMLCTWARDH--GITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-N- 101 (256)
T ss_dssp HHHHHHTCCCTTCEEEEETCTTCHHHHHHHHHT--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-S-
T ss_pred HHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc--CCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-C-
Confidence 344555678899999999999999999999886 368999999999999999999999985 79999999988765 2
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
++||+|++- +++..-+| ...+|+.+.+++++ |.++.++..
T Consensus 102 --~~fD~V~~~------~~~~~~~~--------------------------~~~~l~~~~r~LkpgG~l~~~~~~ 142 (256)
T 1nkv_A 102 --EKCDVAACV------GATWIAGG--------------------------FAGAEELLAQSLKPGGIMLIGEPY 142 (256)
T ss_dssp --SCEEEEEEE------SCGGGTSS--------------------------SHHHHHHHTTSEEEEEEEEEEEEE
T ss_pred --CCCCEEEEC------CChHhcCC--------------------------HHHHHHHHHHHcCCCeEEEEecCc
Confidence 579999972 12211111 15788999999887 777776543
No 83
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.30 E-value=1.7e-11 Score=106.77 Aligned_cols=132 Identities=14% Similarity=0.171 Sum_probs=98.0
Q ss_pred hHHHHHHhC--CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 019692 126 SSMVAAALA--PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 203 (337)
Q Consensus 126 s~l~~~~l~--~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 203 (337)
...+...+. +.++.+|||+|||+|..+..+++. +..+|+++|+++.+++.++++++..++.+++++++|+.+..
T Consensus 47 ~~~~~~~l~~~~~~~~~vLDiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-- 122 (205)
T 3grz_A 47 TQLAMLGIERAMVKPLTVADVGTGSGILAIAAHKL--GAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADV-- 122 (205)
T ss_dssp HHHHHHHHHHHCSSCCEEEEETCTTSHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTC--
T ss_pred HHHHHHHHHHhccCCCEEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccC--
Confidence 334444444 578999999999999999998874 45699999999999999999999999888999999997753
Q ss_pred CCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCc
Q 019692 204 DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQ 282 (337)
Q Consensus 204 ~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~ 282 (337)
.++||+|+++++.. ....+++.+.+++++ |.++.++..
T Consensus 123 ---~~~fD~i~~~~~~~-----------------------------------~~~~~l~~~~~~L~~gG~l~~~~~~--- 161 (205)
T 3grz_A 123 ---DGKFDLIVANILAE-----------------------------------ILLDLIPQLDSHLNEDGQVIFSGID--- 161 (205)
T ss_dssp ---CSCEEEEEEESCHH-----------------------------------HHHHHGGGSGGGEEEEEEEEEEEEE---
T ss_pred ---CCCceEEEECCcHH-----------------------------------HHHHHHHHHHHhcCCCCEEEEEecC---
Confidence 25799999987610 025678888888887 777775433
Q ss_pred ccCHHHHHHHhchhcCCCcEEec
Q 019692 283 VENEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 283 ~ENe~vv~~~l~~~~~~~~~~~~ 305 (337)
.+....+...++ ..||+...
T Consensus 162 ~~~~~~~~~~~~---~~Gf~~~~ 181 (205)
T 3grz_A 162 YLQLPKIEQALA---ENSFQIDL 181 (205)
T ss_dssp GGGHHHHHHHHH---HTTEEEEE
T ss_pred cccHHHHHHHHH---HcCCceEE
Confidence 223444555553 34677654
No 84
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.30 E-value=8.1e-12 Score=111.22 Aligned_cols=84 Identities=25% Similarity=0.259 Sum_probs=69.3
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
+.++++.+|||+|||+|..+..+++..++.++|+++|+++.+++.+.+++++. .+++++.+|+.+.........+||+
T Consensus 73 ~~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~--~~v~~~~~d~~~~~~~~~~~~~~D~ 150 (233)
T 2ipx_A 73 IHIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR--TNIIPVIEDARHPHKYRMLIAMVDV 150 (233)
T ss_dssp CCCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC--TTEEEECSCTTCGGGGGGGCCCEEE
T ss_pred ecCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc--CCeEEEEcccCChhhhcccCCcEEE
Confidence 34678999999999999999999998766689999999999999999888876 6799999999874211001257999
Q ss_pred EEECCC
Q 019692 213 ILLDPS 218 (337)
Q Consensus 213 IlvDpP 218 (337)
|++|+|
T Consensus 151 V~~~~~ 156 (233)
T 2ipx_A 151 IFADVA 156 (233)
T ss_dssp EEECCC
T ss_pred EEEcCC
Confidence 999988
No 85
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.29 E-value=2.3e-11 Score=109.31 Aligned_cols=112 Identities=16% Similarity=0.199 Sum_probs=89.8
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
.+.++.+|||+|||+|..+..+++... ++|+++|+++.+++.++++++..|+.+ ++++++|+.+++... ++||+
T Consensus 43 ~~~~~~~vLDiG~G~G~~~~~l~~~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~fD~ 117 (257)
T 3f4k_A 43 ELTDDAKIADIGCGTGGQTLFLADYVK--GQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQN---EELDL 117 (257)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHCC--SEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCT---TCEEE
T ss_pred cCCCCCeEEEeCCCCCHHHHHHHHhCC--CeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCC---CCEEE
Confidence 567889999999999999999999852 499999999999999999999999876 999999998876432 67999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcc
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQV 283 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ 283 (337)
|++....... + ...+|+.+.+++++ |.++.++++....
T Consensus 118 v~~~~~l~~~-------~--------------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 156 (257)
T 3f4k_A 118 IWSEGAIYNI-------G--------------------------FERGMNEWSKYLKKGGFIAVSEASWFTS 156 (257)
T ss_dssp EEEESCSCCC-------C--------------------------HHHHHHHHHTTEEEEEEEEEEEEEESSS
T ss_pred EEecChHhhc-------C--------------------------HHHHHHHHHHHcCCCcEEEEEEeeccCC
Confidence 9976331110 0 14678999998887 8888887664443
No 86
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.29 E-value=3.4e-11 Score=107.42 Aligned_cols=126 Identities=16% Similarity=0.177 Sum_probs=96.5
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
-+.+|++|+|+|||+|..++.++.. ++..+|+|+|+++.+++.+++|++++|+.+ |+++.+|..+..... .+||.
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~---~~~D~ 93 (230)
T 3lec_A 18 YVPKGARLLDVGSDHAYLPIFLLQM-GYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEA---DNIDT 93 (230)
T ss_dssp TSCTTEEEEEETCSTTHHHHHHHHT-TCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG---GCCCE
T ss_pred hCCCCCEEEEECCchHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccc---cccCE
Confidence 3567899999999999999999886 445689999999999999999999999975 999999988765431 36999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHH
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKS 291 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~ 291 (337)
|++ .|.|. .+=.+||..+...+++ |.+|-+.- .+.+.|.+
T Consensus 94 Ivi----aGmGg------------------------------~lI~~IL~~~~~~l~~~~~lIlqp~-----~~~~~lr~ 134 (230)
T 3lec_A 94 ITI----CGMGG------------------------------RLIADILNNDIDKLQHVKTLVLQPN-----NREDDLRK 134 (230)
T ss_dssp EEE----EEECH------------------------------HHHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHH
T ss_pred EEE----eCCch------------------------------HHHHHHHHHHHHHhCcCCEEEEECC-----CChHHHHH
Confidence 886 34331 1124688888877765 88887653 25777877
Q ss_pred HhchhcCCCcEEec
Q 019692 292 VLPIAMSFGFQLAT 305 (337)
Q Consensus 292 ~l~~~~~~~~~~~~ 305 (337)
.|. ..||.+..
T Consensus 135 ~L~---~~Gf~i~~ 145 (230)
T 3lec_A 135 WLA---ANDFEIVA 145 (230)
T ss_dssp HHH---HTTEEEEE
T ss_pred HHH---HCCCEEEE
Confidence 774 34666643
No 87
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.29 E-value=1.7e-11 Score=110.76 Aligned_cols=100 Identities=20% Similarity=0.291 Sum_probs=77.3
Q ss_pred chhhhcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 019692 111 HPLIVNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190 (337)
Q Consensus 111 ~~~~~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v 190 (337)
++.|.+.....|......+...+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..|+.++
T Consensus 11 ~~~~~~s~~~~~~~~~~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~l~~a~~~~~~~~~~~v 87 (260)
T 1vl5_A 11 HHMYVTSQIHAKGSDLAKLMQIAALKGNEEVLDVATGGGHVANAFAPFV---KKVVAFDLTEDILKVARAFIEGNGHQQV 87 (260)
T ss_dssp ------------CCCHHHHHHHHTCCSCCEEEEETCTTCHHHHHHGGGS---SEEEEEESCHHHHHHHHHHHHHTTCCSE
T ss_pred ceeeecCccccCHHHHHHHHHHhCCCCCCEEEEEeCCCCHHHHHHHHhC---CEEEEEeCCHHHHHHHHHHHHhcCCCce
Confidence 4667777788888888888888888899999999999999999888763 5999999999999999999999998899
Q ss_pred EEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 191 EVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 191 ~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
.++.+|+.+++..+ ++||+|++.
T Consensus 88 ~~~~~d~~~l~~~~---~~fD~V~~~ 110 (260)
T 1vl5_A 88 EYVQGDAEQMPFTD---ERFHIVTCR 110 (260)
T ss_dssp EEEECCC-CCCSCT---TCEEEEEEE
T ss_pred EEEEecHHhCCCCC---CCEEEEEEh
Confidence 99999998876432 579999964
No 88
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.29 E-value=3e-12 Score=114.36 Aligned_cols=148 Identities=16% Similarity=0.180 Sum_probs=104.5
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCC
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLN 199 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~ 199 (337)
++.....++..++...++.+|||+|||+|..+..++..+.+.++|+++|+++.+++.+++++++.|+. +|+++.+|+.+
T Consensus 56 ~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 56 ISPEQAQFLGLLISLTGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhcCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 34444455555555557889999999999999999998765689999999999999999999999985 49999999754
Q ss_pred CCCCC---CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEE
Q 019692 200 LDPKD---PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVY 275 (337)
Q Consensus 200 ~~~~~---~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvY 275 (337)
..+.. ...++||+|++|++.. + ....++.+.+++++ |.+++
T Consensus 136 ~l~~l~~~~~~~~fD~V~~d~~~~---------~--------------------------~~~~l~~~~~~LkpgG~lv~ 180 (232)
T 3cbg_A 136 TLEQLTQGKPLPEFDLIFIDADKR---------N--------------------------YPRYYEIGLNLLRRGGLMVI 180 (232)
T ss_dssp HHHHHHTSSSCCCEEEEEECSCGG---------G--------------------------HHHHHHHHHHTEEEEEEEEE
T ss_pred HHHHHHhcCCCCCcCEEEECCCHH---------H--------------------------HHHHHHHHHHHcCCCeEEEE
Confidence 32110 0015799999997621 0 13567888888887 78888
Q ss_pred EcCCCC--------cccCHHHHHHHhch-hcCCCcEE
Q 019692 276 STCSIH--------QVENEDVIKSVLPI-AMSFGFQL 303 (337)
Q Consensus 276 sTCS~~--------~~ENe~vv~~~l~~-~~~~~~~~ 303 (337)
..+.+. ..+....+..+.+. ..++.+..
T Consensus 181 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 217 (232)
T 3cbg_A 181 DNVLWHGKVTEVDPQEAQTQVLQQFNRDLAQDERVRI 217 (232)
T ss_dssp ECTTGGGGGGCSSCCSHHHHHHHHHHHHHTTCTTEEE
T ss_pred eCCCcCCccCCcccCChHHHHHHHHHHHHhhCCCeEE
Confidence 777654 22334455566542 23455544
No 89
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.28 E-value=3.6e-11 Score=105.95 Aligned_cols=116 Identities=18% Similarity=0.119 Sum_probs=85.8
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..+|... +...|+|+|+++.+++.+++++++.|+.||.++++|+.+++...+ .+.||.|++
T Consensus 37 ~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~-~~~~d~v~~ 114 (213)
T 2fca_A 37 NDNPIHIEVGTGKGQFISGMAKQN-PDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFE-PGEVKRVYL 114 (213)
T ss_dssp SCCCEEEEECCTTSHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCC-TTSCCEEEE
T ss_pred CCCceEEEEecCCCHHHHHHHHHC-CCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcC-cCCcCEEEE
Confidence 467899999999999999999885 457999999999999999999999999999999999987541111 256999998
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
..|+.-. +.. +. . .++ .+..+|+.+.+++++ |.++++|
T Consensus 115 ~~~~p~~----~~~------~~---------~---~rl--~~~~~l~~~~~~LkpgG~l~~~t 153 (213)
T 2fca_A 115 NFSDPWP----KKR------HE---------K---RRL--TYSHFLKKYEEVMGKGGSIHFKT 153 (213)
T ss_dssp ESCCCCC----SGG------GG---------G---GST--TSHHHHHHHHHHHTTSCEEEEEE
T ss_pred ECCCCCc----Ccc------cc---------c---ccc--CcHHHHHHHHHHcCCCCEEEEEe
Confidence 7653210 000 00 0 000 145778888887777 7777665
No 90
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.28 E-value=1.5e-11 Score=109.03 Aligned_cols=81 Identities=17% Similarity=0.136 Sum_probs=68.1
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-CCCCCCccEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAIL 214 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~~fD~Il 214 (337)
.++.+|||+|||+|..+..+|... +...|+|+|+++.+++.+++++++.|+.||.++.+|+.++.+. .+ .++||.|+
T Consensus 33 ~~~~~vLDiGcG~G~~~~~lA~~~-p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~-~~~~d~v~ 110 (218)
T 3dxy_A 33 REAPVTLEIGFGMGASLVAMAKDR-PEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIP-DNSLRMVQ 110 (218)
T ss_dssp SCCCEEEEESCTTCHHHHHHHHHC-TTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSC-TTCEEEEE
T ss_pred CCCCeEEEEeeeChHHHHHHHHHC-CCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcC-CCChheEE
Confidence 367899999999999999999874 4578999999999999999999999999999999998875211 11 25799999
Q ss_pred ECCC
Q 019692 215 LDPS 218 (337)
Q Consensus 215 vDpP 218 (337)
+.-|
T Consensus 111 ~~~~ 114 (218)
T 3dxy_A 111 LFFP 114 (218)
T ss_dssp EESC
T ss_pred EeCC
Confidence 9733
No 91
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.27 E-value=1.5e-11 Score=104.91 Aligned_cols=82 Identities=22% Similarity=0.222 Sum_probs=67.7
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCC-CCCCCccE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKD-PAYSEVRA 212 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~-~~~~~fD~ 212 (337)
..++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++.+++ ++++++++|+.+..... ....+||+
T Consensus 42 ~~~~~~vLD~GcG~G~~~~~~~~~--~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~fD~ 119 (187)
T 2fhp_A 42 YFDGGMALDLYSGSGGLAIEAVSR--GMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKMDANRALEQFYEEKLQFDL 119 (187)
T ss_dssp CCSSCEEEETTCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred hcCCCCEEEeCCccCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEECcHHHHHHHHHhcCCCCCE
Confidence 457899999999999999988773 457999999999999999999999997 47999999987743210 00157999
Q ss_pred EEECCC
Q 019692 213 ILLDPS 218 (337)
Q Consensus 213 IlvDpP 218 (337)
|++|||
T Consensus 120 i~~~~~ 125 (187)
T 2fhp_A 120 VLLDPP 125 (187)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999999
No 92
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.27 E-value=2.1e-11 Score=107.88 Aligned_cols=82 Identities=26% Similarity=0.314 Sum_probs=68.5
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+.++++|||+|||+|..+..+++.+++.++|+++|+++.+++.++++++.. .+++++++|+.+.........+||+|+
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~--~~v~~~~~d~~~~~~~~~~~~~~D~v~ 148 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER--RNIVPILGDATKPEEYRALVPKVDVIF 148 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC--TTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc--CCCEEEEccCCCcchhhcccCCceEEE
Confidence 678999999999999999999998766689999999999999999998765 679999999987421111124799999
Q ss_pred ECCC
Q 019692 215 LDPS 218 (337)
Q Consensus 215 vDpP 218 (337)
+|+|
T Consensus 149 ~~~~ 152 (227)
T 1g8a_A 149 EDVA 152 (227)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9987
No 93
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.27 E-value=7.4e-12 Score=118.41 Aligned_cols=158 Identities=10% Similarity=0.053 Sum_probs=105.7
Q ss_pred CeEEEechhhHHHHHHh----CCCCCCeEEeecCCchhHHHHHHHHcCCC----CEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 117 GCVFLQGKASSMVAAAL----APKPGWKVLDACSAPGNKTVHLAALMKGK----GKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 117 G~~~~Qd~ss~l~~~~l----~~~~g~~VLDl~aG~G~kt~~la~~~~~~----g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
|.++-.+....++..++ .+.++.+|||+|||+|+.+..++..+... ..|+|+|+++.+++.++.|+...|+
T Consensus 106 g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~g~- 184 (344)
T 2f8l_A 106 NHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQRQ- 184 (344)
T ss_dssp GGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHHTC-
T ss_pred CcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhCCC-
Confidence 55554444444444333 56678899999999999999999887432 6899999999999999999999888
Q ss_pred cEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCC
Q 019692 189 NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFP 268 (337)
Q Consensus 189 ~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~ 268 (337)
++.++++|+..... ..+||+|+.|||++. +.. .+. ........ .......+..++.++++++
T Consensus 185 ~~~i~~~D~l~~~~----~~~fD~Ii~NPPfg~---~~~-~~~-~~~~~~~~---------~~g~~~~~~~~l~~~~~~L 246 (344)
T 2f8l_A 185 KMTLLHQDGLANLL----VDPVDVVISDLPVGY---YPD-DEN-AKTFELCR---------EEGHSFAHFLFIEQGMRYT 246 (344)
T ss_dssp CCEEEESCTTSCCC----CCCEEEEEEECCCSE---ESC-HHH-HTTSTTCC---------SSSCEEHHHHHHHHHHHTE
T ss_pred CceEEECCCCCccc----cCCccEEEECCCCCC---cCc-hhh-hhhccccC---------CCCcchHHHHHHHHHHHHh
Confidence 68899999876432 257999999999732 211 000 00000000 0011234567899999988
Q ss_pred CC-cEEEEEc-CCCCcccCHHHHHHHh
Q 019692 269 GV-ERVVYST-CSIHQVENEDVIKSVL 293 (337)
Q Consensus 269 ~~-G~lvYsT-CS~~~~ENe~vv~~~l 293 (337)
++ |.+++.+ .++...+....+.+.|
T Consensus 247 k~gG~~~~v~p~~~~~~~~~~~ir~~l 273 (344)
T 2f8l_A 247 KPGGYLFFLVPDAMFGTSDFAKVDKFI 273 (344)
T ss_dssp EEEEEEEEEEEGGGGGSTTHHHHHHHH
T ss_pred CCCCEEEEEECchhcCCchHHHHHHHH
Confidence 86 7777765 3444444555665555
No 94
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.27 E-value=4.3e-11 Score=107.64 Aligned_cols=124 Identities=12% Similarity=0.124 Sum_probs=95.1
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
-+.+|++|||+|||+|..++.++.. ++..+|+|+|+++.+++.+++|++++|+.+ |++..+|..+..... .+||.
T Consensus 18 ~v~~g~~VlDIGtGsG~l~i~la~~-~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~---~~~D~ 93 (244)
T 3gnl_A 18 YITKNERIADIGSDHAYLPCFAVKN-QTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKK---DAIDT 93 (244)
T ss_dssp TCCSSEEEEEETCSTTHHHHHHHHT-TSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGG---GCCCE
T ss_pred hCCCCCEEEEECCccHHHHHHHHHh-CCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCcc---ccccE
Confidence 3568899999999999999999886 345689999999999999999999999976 999999988765321 25999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHH
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKS 291 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~ 291 (337)
|++ .|.|. ++=.+||..+...+++ +.+|-+.- .+.+.+.+
T Consensus 94 Ivi----agmGg------------------------------~lI~~IL~~~~~~L~~~~~lIlq~~-----~~~~~lr~ 134 (244)
T 3gnl_A 94 IVI----AGMGG------------------------------TLIRTILEEGAAKLAGVTKLILQPN-----IAAWQLRE 134 (244)
T ss_dssp EEE----EEECH------------------------------HHHHHHHHHTGGGGTTCCEEEEEES-----SCHHHHHH
T ss_pred EEE----eCCch------------------------------HHHHHHHHHHHHHhCCCCEEEEEcC-----CChHHHHH
Confidence 987 34331 1124688888887765 78887553 36778877
Q ss_pred HhchhcCCCcEE
Q 019692 292 VLPIAMSFGFQL 303 (337)
Q Consensus 292 ~l~~~~~~~~~~ 303 (337)
.|.. .||.+
T Consensus 135 ~L~~---~Gf~i 143 (244)
T 3gnl_A 135 WSEQ---NNWLI 143 (244)
T ss_dssp HHHH---HTEEE
T ss_pred HHHH---CCCEE
Confidence 7742 35655
No 95
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.26 E-value=3.7e-11 Score=111.74 Aligned_cols=116 Identities=13% Similarity=0.095 Sum_probs=91.2
Q ss_pred HHHHHHhC-CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCC
Q 019692 127 SMVAAALA-PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKD 204 (337)
Q Consensus 127 ~l~~~~l~-~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~ 204 (337)
..+...+. +.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+. +++++.+|+.+++...
T Consensus 106 ~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~ 183 (312)
T 3vc1_A 106 EFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRF--GSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDK 183 (312)
T ss_dssp HHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCT
T ss_pred HHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCC
Confidence 34455566 7889999999999999999999875 368999999999999999999999986 6999999998876332
Q ss_pred CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 205 ~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
++||+|++. +++.. . . +..+|+.+.+++++ |.+++++...
T Consensus 184 ---~~fD~V~~~------~~l~~-~----------------~----------~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 184 ---GAVTASWNN------ESTMY-V----------------D----------LHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp ---TCEEEEEEE------SCGGG-S----------------C----------HHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred ---CCEeEEEEC------Cchhh-C----------------C----------HHHHHHHHHHHcCCCcEEEEEEccc
Confidence 579999963 12210 0 0 46788888888887 8888776443
No 96
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.26 E-value=7.4e-12 Score=116.17 Aligned_cols=127 Identities=13% Similarity=0.086 Sum_probs=91.8
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--C--CCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G--AANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g--~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
.+.+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++... + ..+++++.+|+....... .++||+
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~fD~ 166 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHD-SVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKF--KNEFDV 166 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTST-TCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGC--SSCEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC--CCCceE
Confidence 46899999999999999998763 4579999999999999999998652 2 357999999987643222 257999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC--CCcccCHHHH
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS--IHQVENEDVI 289 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS--~~~~ENe~vv 289 (337)
|++|+|+.+.|.... ..+.++++.+.+++++ |.+++.+|+ +..++...++
T Consensus 167 Ii~d~~~~~~~~~~~---------------------------l~~~~~l~~~~~~LkpgG~lv~~~~~~~~~~~~~~~~~ 219 (296)
T 1inl_A 167 IIIDSTDPTAGQGGH---------------------------LFTEEFYQACYDALKEDGVFSAETEDPFYDIGWFKLAY 219 (296)
T ss_dssp EEEEC-------------------------------------CCSHHHHHHHHHHEEEEEEEEEECCCTTTTHHHHHHHH
T ss_pred EEEcCCCcccCchhh---------------------------hhHHHHHHHHHHhcCCCcEEEEEccCcccCHHHHHHHH
Confidence 999999753332100 0135778888888876 899999988 4566677777
Q ss_pred HHHh
Q 019692 290 KSVL 293 (337)
Q Consensus 290 ~~~l 293 (337)
+.+.
T Consensus 220 ~~l~ 223 (296)
T 1inl_A 220 RRIS 223 (296)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7665
No 97
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.25 E-value=2.5e-11 Score=103.51 Aligned_cols=118 Identities=15% Similarity=0.190 Sum_probs=93.5
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCC
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLN 199 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~ 199 (337)
.++.-...+...+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++.+|+ .++.++++|+.+
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~~---~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~ 93 (192)
T 1l3i_A 17 TAMEVRCLIMCLAEPGKNDVAVDVGCGTGGVTLELAGRV---RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPE 93 (192)
T ss_dssp CCHHHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHTTS---SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHH
T ss_pred ChHHHHHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHhc---CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHH
Confidence 344445566666788899999999999999999888864 7999999999999999999999998 679999999876
Q ss_pred CCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 200 LDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 200 ~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
..+. ...||+|+++.+.. + ...+++.+.+++++ |.++++++
T Consensus 94 ~~~~---~~~~D~v~~~~~~~---------~--------------------------~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 94 ALCK---IPDIDIAVVGGSGG---------E--------------------------LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp HHTT---SCCEEEEEESCCTT---------C--------------------------HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred hccc---CCCCCEEEECCchH---------H--------------------------HHHHHHHHHHhcCCCcEEEEEec
Confidence 2221 14799999886621 0 14678888888887 78888877
Q ss_pred C
Q 019692 279 S 279 (337)
Q Consensus 279 S 279 (337)
+
T Consensus 136 ~ 136 (192)
T 1l3i_A 136 L 136 (192)
T ss_dssp B
T ss_pred C
Confidence 5
No 98
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.25 E-value=2e-11 Score=108.02 Aligned_cols=91 Identities=24% Similarity=0.318 Sum_probs=75.6
Q ss_pred HHHHHHh--CCCCCCeEEeecCCchhHHHHHHHHcC----CCCEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEec
Q 019692 127 SMVAAAL--APKPGWKVLDACSAPGNKTVHLAALMK----GKGKIVACELNKERVRRLKDTIKLSG-----AANIEVLHG 195 (337)
Q Consensus 127 ~l~~~~l--~~~~g~~VLDl~aG~G~kt~~la~~~~----~~g~V~avD~~~~~l~~l~~~~~~~g-----~~~v~~~~~ 195 (337)
..+...+ .++++.+|||+|||+|..+..++...+ +.++|+++|+++.+++.++++++..| ..+++++.+
T Consensus 68 ~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~ 147 (227)
T 2pbf_A 68 ALSLKRLINVLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHK 147 (227)
T ss_dssp HHHHHHHTTTSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEEC
T ss_pred HHHHHHHHhhCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEEC
Confidence 3444555 478899999999999999999999875 45799999999999999999999988 678999999
Q ss_pred cCCCCC----CCCCCCCCccEEEECCCCC
Q 019692 196 DFLNLD----PKDPAYSEVRAILLDPSCS 220 (337)
Q Consensus 196 D~~~~~----~~~~~~~~fD~IlvDpPCS 220 (337)
|+.... .. ..+||+|++++++.
T Consensus 148 d~~~~~~~~~~~---~~~fD~I~~~~~~~ 173 (227)
T 2pbf_A 148 NIYQVNEEEKKE---LGLFDAIHVGASAS 173 (227)
T ss_dssp CGGGCCHHHHHH---HCCEEEEEECSBBS
T ss_pred ChHhcccccCcc---CCCcCEEEECCchH
Confidence 988743 22 25799999998753
No 99
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.25 E-value=9.1e-12 Score=113.50 Aligned_cols=122 Identities=17% Similarity=0.191 Sum_probs=89.3
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCC
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFL 198 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~-~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~ 198 (337)
+++....++... +++|.+|||+|||+|..+..+++.... +.+|+|+|+|+.|++.++++++..+.. +|+++++|+.
T Consensus 56 ~~~~i~~l~~~~--~~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~ 133 (261)
T 4gek_A 56 IISMIGMLAERF--VQPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIR 133 (261)
T ss_dssp HHHHHHHHHHHH--CCTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTT
T ss_pred HHHHHHHHHHHh--CCCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeecccc
Confidence 344444444444 478999999999999999999987643 459999999999999999999988764 6999999998
Q ss_pred CCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 199 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
+++. .+||+|++.- ++.. ..+.+ ...+|++..+.|+| |.++.+.
T Consensus 134 ~~~~-----~~~d~v~~~~------~l~~-----------------~~~~~-------~~~~l~~i~~~LkpGG~lii~e 178 (261)
T 4gek_A 134 DIAI-----ENASMVVLNF------TLQF-----------------LEPSE-------RQALLDKIYQGLNPGGALVLSE 178 (261)
T ss_dssp TCCC-----CSEEEEEEES------CGGG-----------------SCHHH-------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred cccc-----cccccceeee------eeee-----------------cCchh-------HhHHHHHHHHHcCCCcEEEEEe
Confidence 8753 4699998631 2210 01111 24678888888887 7777764
Q ss_pred CC
Q 019692 278 CS 279 (337)
Q Consensus 278 CS 279 (337)
-.
T Consensus 179 ~~ 180 (261)
T 4gek_A 179 KF 180 (261)
T ss_dssp EB
T ss_pred cc
Confidence 33
No 100
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.25 E-value=4.2e-11 Score=104.85 Aligned_cols=99 Identities=22% Similarity=0.219 Sum_probs=81.1
Q ss_pred CeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEecc
Q 019692 117 GCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGD 196 (337)
Q Consensus 117 G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D 196 (337)
|....+......+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++.+++.++++++..|+.++.++.+|
T Consensus 57 ~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d 136 (215)
T 2yxe_A 57 GQTISAIHMVGMMCELLDLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGD 136 (215)
T ss_dssp TEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESC
T ss_pred CcEeCcHHHHHHHHHhhCCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECC
Confidence 44445554555666677888999999999999999999999875557999999999999999999999999889999999
Q ss_pred CCCCCCCCCCCCCccEEEECCC
Q 019692 197 FLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 197 ~~~~~~~~~~~~~fD~IlvDpP 218 (337)
+....+. ..+||+|+++.+
T Consensus 137 ~~~~~~~---~~~fD~v~~~~~ 155 (215)
T 2yxe_A 137 GTLGYEP---LAPYDRIYTTAA 155 (215)
T ss_dssp GGGCCGG---GCCEEEEEESSB
T ss_pred cccCCCC---CCCeeEEEECCc
Confidence 8543321 257999998865
No 101
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.25 E-value=6.9e-12 Score=112.50 Aligned_cols=147 Identities=11% Similarity=0.084 Sum_probs=102.5
Q ss_pred CeEEEe-chhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHH---cCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEE
Q 019692 117 GCVFLQ-GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAAL---MKGKGKIVACELNKERVRRLKDTIKLSGAANIEV 192 (337)
Q Consensus 117 G~~~~Q-d~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~---~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~ 192 (337)
|....| .....++..++...++.+|||+|||+|+.+..+++. +.+.++|+++|+++.+++.++ ..+ .+|++
T Consensus 60 ~~~~~~~p~~~~~l~~~l~~~~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~----~~~-~~v~~ 134 (236)
T 2bm8_A 60 GLRMLKDPDTQAVYHDMLWELRPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPA----SDM-ENITL 134 (236)
T ss_dssp TEECCSCHHHHHHHHHHHHHHCCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCG----GGC-TTEEE
T ss_pred cccccCCHHHHHHHHHHHHhcCCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHh----ccC-CceEE
Confidence 334445 333444445555556789999999999999999997 456789999999999998876 122 57999
Q ss_pred EeccCCCC---CCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhC-CC
Q 019692 193 LHGDFLNL---DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALS-FP 268 (337)
Q Consensus 193 ~~~D~~~~---~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~-~~ 268 (337)
+++|+.+. +... ..+||+|++|..- .+ ...+|..+.+ ++
T Consensus 135 ~~gD~~~~~~l~~~~--~~~fD~I~~d~~~---------~~--------------------------~~~~l~~~~r~~L 177 (236)
T 2bm8_A 135 HQGDCSDLTTFEHLR--EMAHPLIFIDNAH---------AN--------------------------TFNIMKWAVDHLL 177 (236)
T ss_dssp EECCSSCSGGGGGGS--SSCSSEEEEESSC---------SS--------------------------HHHHHHHHHHHTC
T ss_pred EECcchhHHHHHhhc--cCCCCEEEECCch---------Hh--------------------------HHHHHHHHHHhhC
Confidence 99999875 2111 1369999998651 01 1357888875 77
Q ss_pred CC-cEEEEEc-CCCCcccCHHHHHHHhchhcCCCcEEecC
Q 019692 269 GV-ERVVYST-CSIHQVENEDVIKSVLPIAMSFGFQLATP 306 (337)
Q Consensus 269 ~~-G~lvYsT-CS~~~~ENe~vv~~~l~~~~~~~~~~~~~ 306 (337)
++ |.+|+.. |.+.+..+++.+..+++.. ..+|+....
T Consensus 178 kpGG~lv~~d~~~~~~~~~~~~~~~~l~~~-~~~f~~~~~ 216 (236)
T 2bm8_A 178 EEGDYFIIEDMIPYWYRYAPQLFSEYLGAF-RDVLSMDML 216 (236)
T ss_dssp CTTCEEEECSCHHHHHHHCHHHHHHHHHTT-TTTEEEETT
T ss_pred CCCCEEEEEeCcccccccCHHHHHHHHHhC-cccEEEcch
Confidence 76 8888754 3444567777888888532 227888653
No 102
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.24 E-value=4.1e-11 Score=112.76 Aligned_cols=97 Identities=22% Similarity=0.290 Sum_probs=76.5
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC-----------CCc
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG-----------AAN 189 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g-----------~~~ 189 (337)
........+...+++.+|.+|||+|||+|..+..++...++.++|+++|+++.+++.++++++.+| ..+
T Consensus 89 ~~~~~~~~~l~~l~~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~ 168 (336)
T 2b25_A 89 TFPKDINMILSMMDINPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN 168 (336)
T ss_dssp CCHHHHHHHHHHHTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC
T ss_pred cCHHHHHHHHHhcCCCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCc
Confidence 333335556667788999999999999999999999987666899999999999999999998754 357
Q ss_pred EEEEeccCCCCCCCCCCCCCccEEEECCC
Q 019692 190 IEVLHGDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 190 v~~~~~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
|+++.+|+.+.....+ .++||+|++|+|
T Consensus 169 v~~~~~d~~~~~~~~~-~~~fD~V~~~~~ 196 (336)
T 2b25_A 169 VDFIHKDISGATEDIK-SLTFDAVALDML 196 (336)
T ss_dssp EEEEESCTTCCC--------EEEEEECSS
T ss_pred eEEEECChHHcccccC-CCCeeEEEECCC
Confidence 9999999987642211 246999999977
No 103
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.24 E-value=8.6e-11 Score=104.97 Aligned_cols=89 Identities=19% Similarity=0.215 Sum_probs=75.4
Q ss_pred hhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCC
Q 019692 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDP 202 (337)
Q Consensus 124 ~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~ 202 (337)
.....+...+++.+|.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++++..|+ .+++++.+|+.+...
T Consensus 78 ~~~~~~~~~~~~~~~~~vldiG~G~G~~~~~l~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~ 154 (248)
T 2yvl_A 78 KDSFYIALKLNLNKEKRVLEFGTGSGALLAVLSEV---AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEV 154 (248)
T ss_dssp HHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCC
T ss_pred hhHHHHHHhcCCCCCCEEEEeCCCccHHHHHHHHh---CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhccc
Confidence 34445566677889999999999999999999987 47999999999999999999999998 679999999987541
Q ss_pred CCCCCCCccEEEECCC
Q 019692 203 KDPAYSEVRAILLDPS 218 (337)
Q Consensus 203 ~~~~~~~fD~IlvDpP 218 (337)
. ...||+|++|+|
T Consensus 155 ~---~~~~D~v~~~~~ 167 (248)
T 2yvl_A 155 P---EGIFHAAFVDVR 167 (248)
T ss_dssp C---TTCBSEEEECSS
T ss_pred C---CCcccEEEECCc
Confidence 2 257999999887
No 104
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.23 E-value=1.3e-11 Score=120.89 Aligned_cols=142 Identities=18% Similarity=0.183 Sum_probs=107.5
Q ss_pred cCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcC------------CCCEEEEEeCCHHHHHHHHHHHH
Q 019692 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK------------GKGKIVACELNKERVRRLKDTIK 183 (337)
Q Consensus 116 ~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~------------~~g~V~avD~~~~~l~~l~~~~~ 183 (337)
.|.++-...-+.+++..+.+.++.+|||.|||+|++...+++.+. ....++|+|+++.+++.++.|+.
T Consensus 150 ~G~fyTP~~v~~~mv~~l~~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~lA~~nl~ 229 (445)
T 2okc_A 150 AGQYFTPRPLIQAMVDCINPQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTLASMNLY 229 (445)
T ss_dssp CGGGCCCHHHHHHHHHHHCCCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHHHHHHHH
T ss_pred CCcccCcHHHHHHHHHHhCCCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHHHHHHHH
Confidence 466666666777888888999999999999999999999887652 12579999999999999999999
Q ss_pred HhCCC--cEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCc---ccCccCCCCCCCCCCCcccHHHHHHHHHHHH
Q 019692 184 LSGAA--NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAE---RLDHLLPSHASGHTADPTEMERLNKLSAFQK 258 (337)
Q Consensus 184 ~~g~~--~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~---~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~ 258 (337)
..|+. ++.+.++|+...+.. .+||+|+.+||.++.....+ +.+..++ -...+.
T Consensus 230 l~g~~~~~~~i~~gD~l~~~~~----~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~------------------~~~~~~ 287 (445)
T 2okc_A 230 LHGIGTDRSPIVCEDSLEKEPS----TLVDVILANPPFGTRPAGSVDINRPDFYVE------------------TKNNQL 287 (445)
T ss_dssp HTTCCSSCCSEEECCTTTSCCS----SCEEEEEECCCSSCCCTTCCCCCCTTSSSC------------------CSCHHH
T ss_pred HhCCCcCCCCEeeCCCCCCccc----CCcCEEEECCCCCCcccccchhhHhhcCCC------------------CcchHH
Confidence 99985 688899998876532 47999999999987653221 1111110 011256
Q ss_pred HHHHHHhCCCCC-cEEEEEcCC
Q 019692 259 KALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 259 ~lL~~A~~~~~~-G~lvYsTCS 279 (337)
..+.++++++++ |++++.++.
T Consensus 288 ~fl~~~~~~Lk~gG~~a~V~p~ 309 (445)
T 2okc_A 288 NFLQHMMLMLKTGGRAAVVLPD 309 (445)
T ss_dssp HHHHHHHHHEEEEEEEEEEEEH
T ss_pred HHHHHHHHHhccCCEEEEEECC
Confidence 788888888876 888887754
No 105
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.23 E-value=3.4e-12 Score=112.99 Aligned_cols=125 Identities=13% Similarity=0.116 Sum_probs=93.0
Q ss_pred EEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCC
Q 019692 120 FLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFL 198 (337)
Q Consensus 120 ~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~ 198 (337)
.+......++..++...++.+|||+|||+|..+..++..+.+.++|+++|+++.+++.++++++..|+ .+|+++.+|+.
T Consensus 52 ~~~~~~~~~l~~l~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~ 131 (229)
T 2avd_A 52 MMTCEQAQLLANLARLIQAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPAL 131 (229)
T ss_dssp SCCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred ccCHHHHHHHHHHHHhcCCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHH
Confidence 33444444555555566789999999999999999999876568999999999999999999999998 46999999986
Q ss_pred CCCCCCC---CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEE
Q 019692 199 NLDPKDP---AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVV 274 (337)
Q Consensus 199 ~~~~~~~---~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lv 274 (337)
+...... ...+||+|++|++... +..+++.+.+++++ |.++
T Consensus 132 ~~~~~~~~~~~~~~~D~v~~d~~~~~-----------------------------------~~~~l~~~~~~L~pgG~lv 176 (229)
T 2avd_A 132 ETLDELLAAGEAGTFDVAVVDADKEN-----------------------------------CSAYYERCLQLLRPGGILA 176 (229)
T ss_dssp HHHHHHHHTTCTTCEEEEEECSCSTT-----------------------------------HHHHHHHHHHHEEEEEEEE
T ss_pred HHHHHHHhcCCCCCccEEEECCCHHH-----------------------------------HHHHHHHHHHHcCCCeEEE
Confidence 5421110 0147999999987110 13567788887777 6777
Q ss_pred EEcCC
Q 019692 275 YSTCS 279 (337)
Q Consensus 275 YsTCS 279 (337)
...+.
T Consensus 177 ~~~~~ 181 (229)
T 2avd_A 177 VLRVL 181 (229)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 65544
No 106
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.23 E-value=4.1e-11 Score=106.54 Aligned_cols=79 Identities=25% Similarity=0.271 Sum_probs=66.9
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCC----CCCCCCCCC
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN----LDPKDPAYS 208 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~----~~~~~~~~~ 208 (337)
+.+.++.+|||+|||+|..+.+++...+ .++|+++|+++.+++.++++++.. .|+.++.+|+.. .+.. .
T Consensus 70 ~~~~~~~~VLDlGcG~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~--~~v~~~~~d~~~~~~~~~~~----~ 142 (230)
T 1fbn_A 70 MPIKRDSKILYLGASAGTTPSHVADIAD-KGIVYAIEYAPRIMRELLDACAER--ENIIPILGDANKPQEYANIV----E 142 (230)
T ss_dssp CCCCTTCEEEEESCCSSHHHHHHHHHTT-TSEEEEEESCHHHHHHHHHHTTTC--TTEEEEECCTTCGGGGTTTS----C
T ss_pred cCCCCCCEEEEEcccCCHHHHHHHHHcC-CcEEEEEECCHHHHHHHHHHhhcC--CCeEEEECCCCCcccccccC----c
Confidence 3456899999999999999999999865 589999999999999999998765 689999999987 3321 5
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.||+|+.|+|
T Consensus 143 ~~D~v~~~~~ 152 (230)
T 1fbn_A 143 KVDVIYEDVA 152 (230)
T ss_dssp CEEEEEECCC
T ss_pred cEEEEEEecC
Confidence 7999998765
No 107
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.22 E-value=4.7e-11 Score=106.45 Aligned_cols=99 Identities=17% Similarity=0.232 Sum_probs=81.2
Q ss_pred hcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe
Q 019692 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 194 (337)
Q Consensus 115 ~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~ 194 (337)
..|....+......+...+.+.++.+|||+|||+|..+..+++..+ ++|+++|+++.+++.++++++..|+.+++++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~l~~~~~~~vLdiG~G~G~~~~~la~~~~--~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~ 146 (235)
T 1jg1_A 69 PAGQTVSAPHMVAIMLEIANLKPGMNILEVGTGSGWNAALISEIVK--TDVYTIERIPELVEFAKRNLERAGVKNVHVIL 146 (235)
T ss_dssp STTCEECCHHHHHHHHHHHTCCTTCCEEEECCTTSHHHHHHHHHHC--SCEEEEESCHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCCceeccHHHHHHHHHhcCCCCCCEEEEEeCCcCHHHHHHHHHhC--CEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEE
Confidence 3455666666666677778889999999999999999999999864 78999999999999999999999998899999
Q ss_pred ccCCCCCCCCCCCCCccEEEECCC
Q 019692 195 GDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 195 ~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
+|+.. .... ...||+|+++.+
T Consensus 147 ~d~~~-~~~~--~~~fD~Ii~~~~ 167 (235)
T 1jg1_A 147 GDGSK-GFPP--KAPYDVIIVTAG 167 (235)
T ss_dssp SCGGG-CCGG--GCCEEEEEECSB
T ss_pred CCccc-CCCC--CCCccEEEECCc
Confidence 99732 2111 235999999866
No 108
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.22 E-value=1.3e-11 Score=103.67 Aligned_cols=80 Identities=19% Similarity=0.211 Sum_probs=66.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-CCCCCccEEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-PAYSEVRAILL 215 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-~~~~~fD~Ilv 215 (337)
++.+|||+|||+|..+..++... ..|+++|+++.+++.++++++..++ +++++++|+.+..+.. ....+||+|++
T Consensus 41 ~~~~vLD~GcG~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~~~~~~~~~D~i~~ 116 (171)
T 1ws6_A 41 RRGRFLDPFAGSGAVGLEAASEG---WEAVLVEKDPEAVRLLKENVRRTGL-GARVVALPVEVFLPEAKAQGERFTVAFM 116 (171)
T ss_dssp TCCEEEEETCSSCHHHHHHHHTT---CEEEEECCCHHHHHHHHHHHHHHTC-CCEEECSCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeCCCcCHHHHHHHHCC---CeEEEEeCCHHHHHHHHHHHHHcCC-ceEEEeccHHHHHHhhhccCCceEEEEE
Confidence 78899999999999999998862 3499999999999999999999988 8999999987642211 00136999999
Q ss_pred CCCCC
Q 019692 216 DPSCS 220 (337)
Q Consensus 216 DpPCS 220 (337)
|||..
T Consensus 117 ~~~~~ 121 (171)
T 1ws6_A 117 APPYA 121 (171)
T ss_dssp CCCTT
T ss_pred CCCCc
Confidence 99965
No 109
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.22 E-value=7.3e-11 Score=110.28 Aligned_cols=96 Identities=18% Similarity=0.262 Sum_probs=81.3
Q ss_pred echhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC
Q 019692 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201 (337)
Q Consensus 122 Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~ 201 (337)
|......+...+.+++|++|||+|||+|..+..+++.....++|+++|+++.+++.++++++..|+.+++++.+|+.+..
T Consensus 60 ~~~~~~~l~~~l~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~ 139 (317)
T 1dl5_A 60 QPSLMALFMEWVGLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGV 139 (317)
T ss_dssp CHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC
T ss_pred CHHHHHHHHHhcCCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhcc
Confidence 44445566677888999999999999999999999986435789999999999999999999999988999999998754
Q ss_pred CCCCCCCCccEEEECCCCC
Q 019692 202 PKDPAYSEVRAILLDPSCS 220 (337)
Q Consensus 202 ~~~~~~~~fD~IlvDpPCS 220 (337)
+. .++||+|++++++.
T Consensus 140 ~~---~~~fD~Iv~~~~~~ 155 (317)
T 1dl5_A 140 PE---FSPYDVIFVTVGVD 155 (317)
T ss_dssp GG---GCCEEEEEECSBBS
T ss_pred cc---CCCeEEEEEcCCHH
Confidence 32 25799999998854
No 110
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.21 E-value=1.5e-11 Score=110.64 Aligned_cols=121 Identities=14% Similarity=0.124 Sum_probs=86.7
Q ss_pred CCCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHh---CCCc----------------------
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLS---GAAN---------------------- 189 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~---g~~~---------------------- 189 (337)
.++.+|||+|||+|..+..++..+ .+..+|+|+|+|+.+++.+++++... |+.+
T Consensus 50 ~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 129 (250)
T 1o9g_A 50 DGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELERREQSERFGKPSYLEAAQ 129 (250)
T ss_dssp CSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred CCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhhhhhhhhcccccchhhhh
Confidence 467899999999999999998873 23468999999999999999998876 5532
Q ss_pred ----EE-------------EEeccCCCCCCCC--CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHH
Q 019692 190 ----IE-------------VLHGDFLNLDPKD--PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERL 250 (337)
Q Consensus 190 ----v~-------------~~~~D~~~~~~~~--~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~ 250 (337)
|+ ++++|+.+..... ....+||+|++|||......+..
T Consensus 130 ~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~~~~~----------------------- 186 (250)
T 1o9g_A 130 AARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERTHWEG----------------------- 186 (250)
T ss_dssp HHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSSSSSS-----------------------
T ss_pred hhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccccccc-----------------------
Confidence 66 8999987743200 00137999999999654322110
Q ss_pred HHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 251 NKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 251 ~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
......+..+++++.+++++ |.++++.++
T Consensus 187 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 216 (250)
T 1o9g_A 187 QVPGQPVAGLLRSLASALPAHAVIAVTDRS 216 (250)
T ss_dssp CCCHHHHHHHHHHHHHHSCTTCEEEEEESS
T ss_pred cccccHHHHHHHHHHHhcCCCcEEEEeCcc
Confidence 01123456788888888876 888876555
No 111
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.21 E-value=3.6e-11 Score=106.56 Aligned_cols=100 Identities=24% Similarity=0.305 Sum_probs=78.8
Q ss_pred CeEEEechhhHHHHHHh--CCCCCCeEEeecCCchhHHHHHHHHcCC-----CCEEEEEeCCHHHHHHHHHHHHHhC---
Q 019692 117 GCVFLQGKASSMVAAAL--APKPGWKVLDACSAPGNKTVHLAALMKG-----KGKIVACELNKERVRRLKDTIKLSG--- 186 (337)
Q Consensus 117 G~~~~Qd~ss~l~~~~l--~~~~g~~VLDl~aG~G~kt~~la~~~~~-----~g~V~avD~~~~~l~~l~~~~~~~g--- 186 (337)
|..+.|......+...+ .++++.+|||+|||+|..+..+++..+. .++|+++|+++.+++.+++++++.|
T Consensus 62 ~~~~~~p~~~~~~~~~l~~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~ 141 (227)
T 1r18_A 62 GVTISAPHMHAFALEYLRDHLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSM 141 (227)
T ss_dssp TEEECCHHHHHHHHHHTTTTCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHH
T ss_pred CCccCChHHHHHHHHHHHhhCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccc
Confidence 33444554445555666 4788999999999999999999997642 3699999999999999999999877
Q ss_pred --CCcEEEEeccCCCCCCCCCCCCCccEEEECCCC
Q 019692 187 --AANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 187 --~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
..+++++.+|+....+. ..+||+|+++.++
T Consensus 142 ~~~~~v~~~~~d~~~~~~~---~~~fD~I~~~~~~ 173 (227)
T 1r18_A 142 LDSGQLLIVEGDGRKGYPP---NAPYNAIHVGAAA 173 (227)
T ss_dssp HHHTSEEEEESCGGGCCGG---GCSEEEEEECSCB
T ss_pred cCCCceEEEECCcccCCCc---CCCccEEEECCch
Confidence 67899999998763221 2579999998874
No 112
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.21 E-value=1.2e-10 Score=100.67 Aligned_cols=124 Identities=14% Similarity=0.131 Sum_probs=86.7
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC----------
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---------- 203 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~-~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~---------- 203 (337)
++++.+|||+|||+|+.+..+++..++ .++|+|+|+++.. ...+++++++|+.+....
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~-----------~~~~v~~~~~d~~~~~~~~~~~~~~i~~ 88 (201)
T 2plw_A 20 LKKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD-----------PIPNVYFIQGEIGKDNMNNIKNINYIDN 88 (201)
T ss_dssp CCTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC-----------CCTTCEEEECCTTTTSSCCC--------
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC-----------CCCCceEEEccccchhhhhhcccccccc
Confidence 578899999999999999999998753 5799999999831 245789999998876410
Q ss_pred ------------CCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-
Q 019692 204 ------------DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV- 270 (337)
Q Consensus 204 ------------~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~- 270 (337)
.....+||+|++|+++.-.|. ...+.....+++..+|..+.+++++
T Consensus 89 ~~~~~~~~~~~~~~~~~~fD~v~~~~~~~~~g~---------------------~~~d~~~~~~~~~~~l~~~~~~Lkpg 147 (201)
T 2plw_A 89 MNNNSVDYKLKEILQDKKIDIILSDAAVPCIGN---------------------KIDDHLNSCELTLSITHFMEQYINIG 147 (201)
T ss_dssp ---CHHHHHHHHHHTTCCEEEEEECCCCCCCSC---------------------HHHHHHHHHHHHHHHHHHHHHHEEEE
T ss_pred ccchhhHHHHHhhcCCCcccEEEeCCCcCCCCC---------------------cccCHHHHHHHHHHHHHHHHHHccCC
Confidence 001257999999987544332 1223334456678899999998887
Q ss_pred cEEEEEcCCCCcccCHHHHHHHh
Q 019692 271 ERVVYSTCSIHQVENEDVIKSVL 293 (337)
Q Consensus 271 G~lvYsTCS~~~~ENe~vv~~~l 293 (337)
|.++..+. ..++...+...+
T Consensus 148 G~lv~~~~---~~~~~~~l~~~l 167 (201)
T 2plw_A 148 GTYIVKMY---LGSQTNNLKTYL 167 (201)
T ss_dssp EEEEEEEE---CSTTHHHHHHHH
T ss_pred CEEEEEEe---CCCCHHHHHHHH
Confidence 77776443 234544555555
No 113
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.20 E-value=2e-11 Score=122.21 Aligned_cols=144 Identities=15% Similarity=0.116 Sum_probs=104.7
Q ss_pred hcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCC-----------------CEEEEEeCCHHHHHH
Q 019692 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGK-----------------GKIVACELNKERVRR 177 (337)
Q Consensus 115 ~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~-----------------g~V~avD~~~~~l~~ 177 (337)
..|.++-.+.-+.+++..+.+.++.+|+|.|||+|++.+.++..+... ..++|+|+++.+++.
T Consensus 147 ~~G~fyTP~~iv~~mv~~l~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~~~~~l 226 (541)
T 2ar0_A 147 GAGQYFTPRPLIKTIIHLLKPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVPGTRRL 226 (541)
T ss_dssp ---CCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCHHHHHH
T ss_pred cCCeeeCCHHHHHHHHHHhccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCHHHHHH
Confidence 357777777777888888999999999999999999999888875321 379999999999999
Q ss_pred HHHHHHHhCCCc-----EEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHH
Q 019692 178 LKDTIKLSGAAN-----IEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNK 252 (337)
Q Consensus 178 l~~~~~~~g~~~-----v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~ 252 (337)
++.|+...|+.+ +.+.++|+...+... ..+||+|+.|||+++......+.+...+
T Consensus 227 A~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~--~~~fD~Vv~NPPf~~~~~~~~~~~~~~~------------------ 286 (541)
T 2ar0_A 227 ALMNCLLHDIEGNLDHGGAIRLGNTLGSDGEN--LPKAHIVATNPPFGSAAGTNITRTFVHP------------------ 286 (541)
T ss_dssp HHHHHHTTTCCCBGGGTBSEEESCTTSHHHHT--SCCEEEEEECCCCTTCSSCCCCSCCSSC------------------
T ss_pred HHHHHHHhCCCccccccCCeEeCCCccccccc--ccCCeEEEECCCcccccchhhHhhcCCC------------------
Confidence 999999888875 788999987643211 2579999999999876432211111110
Q ss_pred HHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 253 LSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 253 l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
-.+.+...+.++++++++ |++++.+.
T Consensus 287 ~~~~~~~Fl~~~l~~Lk~gGr~a~V~p 313 (541)
T 2ar0_A 287 TSNKQLCFMQHIIETLHPGGRAAVVVP 313 (541)
T ss_dssp CSCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCchHHHHHHHHHHHhCCCCEEEEEec
Confidence 011234678888888876 77777654
No 114
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.19 E-value=1.1e-10 Score=104.97 Aligned_cols=84 Identities=17% Similarity=0.188 Sum_probs=68.2
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--------CCCcEEEEeccCCCCCCCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--------GAANIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--------g~~~v~~~~~D~~~~~~~~~~ 206 (337)
+.++.+|||+|||+|..+..++... +...|+|+|+++.+++.++++++.+ |+.|+.++.+|+.+..+....
T Consensus 47 ~~~~~~vLDiGcG~G~~~~~la~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~ 125 (246)
T 2vdv_E 47 MTKKVTIADIGCGFGGLMIDLSPAF-PEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFE 125 (246)
T ss_dssp BSCCEEEEEETCTTSHHHHHHHHHS-TTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHHhC-CCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhcc
Confidence 4568899999999999999999874 4569999999999999999999987 888999999999873221111
Q ss_pred CCCccEEEECCCC
Q 019692 207 YSEVRAILLDPSC 219 (337)
Q Consensus 207 ~~~fD~IlvDpPC 219 (337)
...+|.|++.-|.
T Consensus 126 ~~~~d~v~~~~p~ 138 (246)
T 2vdv_E 126 KGQLSKMFFCFPD 138 (246)
T ss_dssp TTCEEEEEEESCC
T ss_pred ccccCEEEEECCC
Confidence 2578999876553
No 115
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.19 E-value=1.2e-10 Score=104.90 Aligned_cols=86 Identities=12% Similarity=0.018 Sum_probs=69.0
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCC-CCCCCC--CCCccE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNL-DPKDPA--YSEVRA 212 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~-~~~~~~--~~~fD~ 212 (337)
++.+|||+|||+|..+..++.... ..+|+++|+++.+++.++++++.+|+.+ |+++++|+.+. ....+. ..+||+
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~-~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~ 143 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLN-GWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDF 143 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHH-CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCC-CCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccE
Confidence 577999999999999999988753 4799999999999999999999999875 99999997762 211111 147999
Q ss_pred EEECCCCCCcc
Q 019692 213 ILLDPSCSGSG 223 (337)
Q Consensus 213 IlvDpPCSg~G 223 (337)
|++|||+...+
T Consensus 144 i~~npp~~~~~ 154 (254)
T 2h00_A 144 CMCNPPFFANQ 154 (254)
T ss_dssp EEECCCCC---
T ss_pred EEECCCCccCc
Confidence 99999987655
No 116
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.18 E-value=5.7e-11 Score=114.78 Aligned_cols=153 Identities=15% Similarity=0.089 Sum_probs=103.3
Q ss_pred hcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe
Q 019692 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 194 (337)
Q Consensus 115 ~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~ 194 (337)
..|.++-.+.-...++..+...++.+|||+|||+|..+..+++...+...|+|+|+++.+++.+ .++.+++
T Consensus 17 ~~g~~~TP~~l~~~~~~~~~~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a---------~~~~~~~ 87 (421)
T 2ih2_A 17 SLGRVETPPEVVDFMVSLAEAPRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP---------PWAEGIL 87 (421)
T ss_dssp ----CCCCHHHHHHHHHHCCCCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC---------TTEEEEE
T ss_pred cCceEeCCHHHHHHHHHhhccCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC---------CCCcEEe
Confidence 3466666666677777777766678999999999999999998764457999999999998766 4689999
Q ss_pred ccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHH----------HHHHHHHHHHH
Q 019692 195 GDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKL----------SAFQKKALRHA 264 (337)
Q Consensus 195 ~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l----------~~~Q~~lL~~A 264 (337)
+|+...... .+||+|+++||+...+...+.. . + ...+....+ .+.+..++.++
T Consensus 88 ~D~~~~~~~----~~fD~Ii~NPPy~~~~~~~~~~-~----~--------~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~ 150 (421)
T 2ih2_A 88 ADFLLWEPG----EAFDLILGNPPYGIVGEASKYP-I----H--------VFKAVKDLYKKAFSTWKGKYNLYGAFLEKA 150 (421)
T ss_dssp SCGGGCCCS----SCEEEEEECCCCCCBSCTTTCS-B----C--------CCHHHHHHHHHHCTTCCTTCCHHHHHHHHH
T ss_pred CChhhcCcc----CCCCEEEECcCccCcccccccc-c----c--------cCHHHHHHHHHhhhcccCCccHHHHHHHHH
Confidence 999876532 5799999999998765311000 0 0 001111111 23566889999
Q ss_pred hCCCCC-cEEEEEcCCC--CcccCHHHHHHHh
Q 019692 265 LSFPGV-ERVVYSTCSI--HQVENEDVIKSVL 293 (337)
Q Consensus 265 ~~~~~~-G~lvYsTCS~--~~~ENe~vv~~~l 293 (337)
.+++++ |.+++.+++- .....+.+.+.++
T Consensus 151 ~~~Lk~~G~~~~i~p~~~l~~~~~~~lr~~l~ 182 (421)
T 2ih2_A 151 VRLLKPGGVLVFVVPATWLVLEDFALLREFLA 182 (421)
T ss_dssp HHHEEEEEEEEEEEEGGGGTCGGGHHHHHHHH
T ss_pred HHHhCCCCEEEEEEChHHhcCccHHHHHHHHH
Confidence 998886 8888877652 2223344444444
No 117
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.18 E-value=2e-10 Score=106.09 Aligned_cols=124 Identities=15% Similarity=0.145 Sum_probs=92.7
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 206 (337)
.+...+.+++|.+|||+|||+|..+..+++..+ .+|+++|+|+.+++.++++++..|+. +|+++.+|+.++ .
T Consensus 63 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~--~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~---~-- 135 (302)
T 3hem_A 63 LALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD--VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEEF---D-- 135 (302)
T ss_dssp HHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGGC---C--
T ss_pred HHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC--CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHHc---C--
Confidence 345556788999999999999999999999763 78999999999999999999999987 799999999876 1
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCc
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQ 282 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~ 282 (337)
++||+|++.. ++..-+|. +.. ... +....+++.+.+++++ |.++..+.+...
T Consensus 136 -~~fD~v~~~~------~~~~~~d~---~~~-------~~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~ 188 (302)
T 3hem_A 136 -EPVDRIVSLG------AFEHFADG---AGD-------AGF-------ERYDTFFKKFYNLTPDDGRMLLHTITIPD 188 (302)
T ss_dssp -CCCSEEEEES------CGGGTTCC---SSC-------CCT-------THHHHHHHHHHHSSCTTCEEEEEEEECCC
T ss_pred -CCccEEEEcc------hHHhcCcc---ccc-------cch-------hHHHHHHHHHHHhcCCCcEEEEEEEeccC
Confidence 5799999752 22221110 000 000 1135778888888887 888887766543
No 118
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.17 E-value=1.3e-11 Score=110.50 Aligned_cols=125 Identities=14% Similarity=0.146 Sum_probs=93.1
Q ss_pred EechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCC
Q 019692 121 LQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLN 199 (337)
Q Consensus 121 ~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~ 199 (337)
++.....++..++...++.+|||+|||+|..+..++..++..++|+++|+++.+++.++++++..|+.+ |.++.+|+.+
T Consensus 44 ~~~~~~~~l~~l~~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 123 (239)
T 2hnk_A 44 ISPEEGQFLNILTKISGAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALE 123 (239)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred cCHHHHHHHHHHHHhhCcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHH
Confidence 344455566666666788999999999999999999987656899999999999999999999999866 9999999765
Q ss_pred CCCCC-------------CCC-CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHh
Q 019692 200 LDPKD-------------PAY-SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL 265 (337)
Q Consensus 200 ~~~~~-------------~~~-~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~ 265 (337)
..+.. +.. ++||+|++|... ++ ....++.+.
T Consensus 124 ~~~~~~~~~~~~~~~~~f~~~~~~fD~I~~~~~~---------~~--------------------------~~~~l~~~~ 168 (239)
T 2hnk_A 124 TLQVLIDSKSAPSWASDFAFGPSSIDLFFLDADK---------EN--------------------------YPNYYPLIL 168 (239)
T ss_dssp HHHHHHHCSSCCGGGTTTCCSTTCEEEEEECSCG---------GG--------------------------HHHHHHHHH
T ss_pred HHHHHHhhcccccccccccCCCCCcCEEEEeCCH---------HH--------------------------HHHHHHHHH
Confidence 32100 001 469999998530 00 125577777
Q ss_pred CCCCC-cEEEEEcCCC
Q 019692 266 SFPGV-ERVVYSTCSI 280 (337)
Q Consensus 266 ~~~~~-G~lvYsTCS~ 280 (337)
+++++ |.++..++.+
T Consensus 169 ~~L~pgG~lv~~~~~~ 184 (239)
T 2hnk_A 169 KLLKPGGLLIADNVLW 184 (239)
T ss_dssp HHEEEEEEEEEECSSG
T ss_pred HHcCCCeEEEEEcccc
Confidence 77776 7787776544
No 119
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.17 E-value=3.3e-10 Score=102.67 Aligned_cols=116 Identities=20% Similarity=0.223 Sum_probs=90.6
Q ss_pred HHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCC
Q 019692 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 127 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~ 205 (337)
..+...+.+.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+. ++.++.+|+.+++..+
T Consensus 51 ~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~- 127 (273)
T 3bus_A 51 DEMIALLDVRSGDRVLDVGCGIGKPAVRLATAR--DVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFED- 127 (273)
T ss_dssp HHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHS--CCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCT-
T ss_pred HHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCC-
Confidence 344555677899999999999999999999875 479999999999999999999999875 5999999998876432
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
++||+|++.-. +..-++ ...+|+.+.+++++ |.++.++..
T Consensus 128 --~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~i~~~~ 168 (273)
T 3bus_A 128 --ASFDAVWALES------LHHMPD--------------------------RGRALREMARVLRPGGTVAIADFV 168 (273)
T ss_dssp --TCEEEEEEESC------TTTSSC--------------------------HHHHHHHHHTTEEEEEEEEEEEEE
T ss_pred --CCccEEEEech------hhhCCC--------------------------HHHHHHHHHHHcCCCeEEEEEEee
Confidence 57999996322 211101 14778899998887 777777644
No 120
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.17 E-value=1.1e-10 Score=103.39 Aligned_cols=96 Identities=18% Similarity=0.166 Sum_probs=78.6
Q ss_pred cCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec
Q 019692 116 NGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG 195 (337)
Q Consensus 116 ~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~ 195 (337)
.|....+......+...+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++...+ ++.++.+
T Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~~~--~v~~~~~ 123 (231)
T 1vbf_A 49 PGINTTALNLGIFMLDELDLHKGQKVLEIGTGIGYYTALIAEIV---DKVVSVEINEKMYNYASKLLSYYN--NIKLILG 123 (231)
T ss_dssp TTEEECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEEESCHHHHHHHHHHHTTCS--SEEEEES
T ss_pred CCCccCCHHHHHHHHHhcCCCCCCEEEEEcCCCCHHHHHHHHHc---CEEEEEeCCHHHHHHHHHHHhhcC--CeEEEEC
Confidence 35555555555666777788899999999999999999999873 799999999999999999998777 7999999
Q ss_pred cCCCCCCCCCCCCCccEEEECCCC
Q 019692 196 DFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 196 D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
|+....+. .++||+|+++.++
T Consensus 124 d~~~~~~~---~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 124 DGTLGYEE---EKPYDRVVVWATA 144 (231)
T ss_dssp CGGGCCGG---GCCEEEEEESSBB
T ss_pred Cccccccc---CCCccEEEECCcH
Confidence 98773321 2579999998663
No 121
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.17 E-value=2.2e-10 Score=98.44 Aligned_cols=85 Identities=22% Similarity=0.143 Sum_probs=72.6
Q ss_pred HHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC
Q 019692 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 127 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 206 (337)
..+...+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..++.++.++.+|+.+.+. .
T Consensus 22 ~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~-~-- 95 (199)
T 2xvm_A 22 SEVLEAVKVVKPGKTLDLGCGNGRNSLYLAAN---GYDVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTF-D-- 95 (199)
T ss_dssp HHHHHHTTTSCSCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCC-C--
T ss_pred HHHHHHhhccCCCeEEEEcCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCC-C--
Confidence 34556667778899999999999999999886 36999999999999999999999998889999999988764 2
Q ss_pred CCCccEEEECCC
Q 019692 207 YSEVRAILLDPS 218 (337)
Q Consensus 207 ~~~fD~IlvDpP 218 (337)
++||+|++...
T Consensus 96 -~~~D~v~~~~~ 106 (199)
T 2xvm_A 96 -RQYDFILSTVV 106 (199)
T ss_dssp -CCEEEEEEESC
T ss_pred -CCceEEEEcch
Confidence 57999997643
No 122
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.17 E-value=4.7e-10 Score=107.75 Aligned_cols=106 Identities=20% Similarity=0.251 Sum_probs=82.5
Q ss_pred CchhhhcCeEEEechhh---HHH---HHHhCCCCCCeEEeecCCchhHHHHHHHHcCC----------------------
Q 019692 110 VHPLIVNGCVFLQGKAS---SMV---AAALAPKPGWKVLDACSAPGNKTVHLAALMKG---------------------- 161 (337)
Q Consensus 110 ~~~~~~~G~~~~Qd~ss---~l~---~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~---------------------- 161 (337)
...+++.|+...|..+. .++ .......++..|||.|||+|++++.+|....+
T Consensus 162 G~~l~krgyr~~~~~Apl~e~lAa~ll~~~~~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w 241 (385)
T 3ldu_A 162 GDALHKRGYREKANKAPIRETLAAGLIYLTPWKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIW 241 (385)
T ss_dssp CSCTTCCSCCCC--CCCCCHHHHHHHHHTSCCCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHH
T ss_pred CChhhhcccccCCCCCCCcHHHHHHHHHhhCCCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHH
Confidence 34667788776664332 122 33456678999999999999999888876422
Q ss_pred ---------------CCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEEEECCCC
Q 019692 162 ---------------KGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 162 ---------------~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
...|+|+|+|+.+++.+++|++.+|+. +|++.++|+.++... .+||+|++|||.
T Consensus 242 ~~~~~~a~~~~~~~~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~----~~~D~Iv~NPPy 311 (385)
T 3ldu_A 242 WDVRKDAFNKIDNESKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSE----DEFGFIITNPPY 311 (385)
T ss_dssp HHHHHHHHHHSCCSCCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCS----CBSCEEEECCCC
T ss_pred HHHHHHHHHHhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcC----CCCcEEEECCCC
Confidence 157999999999999999999999986 699999999987643 479999999994
No 123
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.15 E-value=2.1e-10 Score=99.84 Aligned_cols=112 Identities=19% Similarity=0.183 Sum_probs=86.4
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 206 (337)
.+...+..+++ +|||+|||+|..+..++.. +..+|+++|+++.+++.++++++..|+. +++++++|+.+++...
T Consensus 35 ~~~~~~~~~~~-~vLdiG~G~G~~~~~l~~~--~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~-- 109 (219)
T 3dlc_A 35 NIINRFGITAG-TCIDIGSGPGALSIALAKQ--SDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIED-- 109 (219)
T ss_dssp HHHHHHCCCEE-EEEEETCTTSHHHHHHHHH--SEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCT--
T ss_pred HHHHhcCCCCC-EEEEECCCCCHHHHHHHHc--CCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCc--
Confidence 34445566666 9999999999999999987 3469999999999999999999999875 6999999998876432
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
++||+|++..... .-++ ...+|+.+.+++++ |.++.++
T Consensus 110 -~~~D~v~~~~~l~------~~~~--------------------------~~~~l~~~~~~L~pgG~l~~~~ 148 (219)
T 3dlc_A 110 -NYADLIVSRGSVF------FWED--------------------------VATAFREIYRILKSGGKTYIGG 148 (219)
T ss_dssp -TCEEEEEEESCGG------GCSC--------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred -ccccEEEECchHh------hccC--------------------------HHHHHHHHHHhCCCCCEEEEEe
Confidence 5799999765311 1000 24578888888887 6776654
No 124
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.15 E-value=3.3e-10 Score=98.38 Aligned_cols=119 Identities=17% Similarity=0.228 Sum_probs=90.7
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++..|+.+++++++|+.+..+. ++||+|+++
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~----~~~D~i~~~ 139 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVR-PEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSE----PPFDGVISR 139 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCC----SCEEEEECS
T ss_pred CCCeEEEECCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCcc----CCcCEEEEe
Confidence 47899999999999999999875 4579999999999999999999999998899999999887532 579999964
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHhch
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPI 295 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~ 295 (337)
.- . + ...++..+.+++++ |.++...... ..+.+..++
T Consensus 140 ~~-------~---~--------------------------~~~~l~~~~~~L~~gG~l~~~~~~~----~~~~~~~~~-- 177 (207)
T 1jsx_A 140 AF-------A---S--------------------------LNDMVSWCHHLPGEQGRFYALKGQM----PEDEIALLP-- 177 (207)
T ss_dssp CS-------S---S--------------------------HHHHHHHHTTSEEEEEEEEEEESSC----CHHHHHTSC--
T ss_pred cc-------C---C--------------------------HHHHHHHHHHhcCCCcEEEEEeCCC----chHHHHHHh--
Confidence 21 0 0 14788899898887 6666654332 233444443
Q ss_pred hcCCCcEEec
Q 019692 296 AMSFGFQLAT 305 (337)
Q Consensus 296 ~~~~~~~~~~ 305 (337)
. +|+.+.
T Consensus 178 --~-g~~~~~ 184 (207)
T 1jsx_A 178 --E-EYQVES 184 (207)
T ss_dssp --T-TEEEEE
T ss_pred --c-CCceee
Confidence 1 777654
No 125
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.15 E-value=9.4e-11 Score=98.25 Aligned_cols=121 Identities=26% Similarity=0.299 Sum_probs=88.1
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC--------CCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD--------PKDPA 206 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~--------~~~~~ 206 (337)
++++.+|||+|||+|..+..+++.+++..+|+++|+++ +++ ..+++++.+|+.+.+ ..
T Consensus 20 ~~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~----------~~~~~~~~~d~~~~~~~~~~~~~~~--- 85 (180)
T 1ej0_A 20 FKPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDP----------IVGVDFLQGDFRDELVMKALLERVG--- 85 (180)
T ss_dssp CCTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCC----------CTTEEEEESCTTSHHHHHHHHHHHT---
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-ccc----------cCcEEEEEcccccchhhhhhhccCC---
Confidence 67899999999999999999999875568999999999 653 257999999998763 22
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccC
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVEN 285 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~EN 285 (337)
.++||+|++|+|+...+.. ..+.......+..+++.+.+++++ |.++.++. ..++
T Consensus 86 ~~~~D~i~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~---~~~~ 141 (180)
T 1ej0_A 86 DSKVQVVMSDMAPNMSGTP---------------------AVDIPRAMYLVELALEMCRDVLAPGGSFVVKVF---QGEG 141 (180)
T ss_dssp TCCEEEEEECCCCCCCSCH---------------------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEEE---SSTT
T ss_pred CCceeEEEECCCccccCCC---------------------ccchHHHHHHHHHHHHHHHHHcCCCcEEEEEEe---cCCc
Confidence 2579999999998765521 222333445568889999988887 77775443 3344
Q ss_pred HHHHHHHh
Q 019692 286 EDVIKSVL 293 (337)
Q Consensus 286 e~vv~~~l 293 (337)
...+...+
T Consensus 142 ~~~~~~~~ 149 (180)
T 1ej0_A 142 FDEYLREI 149 (180)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 44444444
No 126
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.14 E-value=1.4e-10 Score=111.24 Aligned_cols=90 Identities=16% Similarity=0.144 Sum_probs=72.4
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH-------HHhCC--CcEEEEeccCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI-------KLSGA--ANIEVLHGDFL 198 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~-------~~~g~--~~v~~~~~D~~ 198 (337)
.+...+.+++|++|||+|||+|..++.+|... +..+|+|+|+++.+++.+++++ +.+|+ .+|+++++|+.
T Consensus 164 ~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~-g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~GD~~ 242 (438)
T 3uwp_A 164 QMIDEIKMTDDDLFVDLGSGVGQVVLQVAAAT-NCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 242 (438)
T ss_dssp HHHHHHCCCTTCEEEEESCTTSHHHHHHHHHC-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEECCTT
T ss_pred HHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEECccc
Confidence 34456788999999999999999999999875 4457999999999999998765 44576 57999999998
Q ss_pred CCCCCCCCCCCccEEEECCCC
Q 019692 199 NLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPC 219 (337)
+++..+ .+..||+|+++++|
T Consensus 243 ~lp~~d-~~~~aDVVf~Nn~~ 262 (438)
T 3uwp_A 243 SEEWRE-RIANTSVIFVNNFA 262 (438)
T ss_dssp SHHHHH-HHHTCSEEEECCTT
T ss_pred CCcccc-ccCCccEEEEcccc
Confidence 875321 12469999999885
No 127
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.14 E-value=3.1e-10 Score=107.22 Aligned_cols=135 Identities=18% Similarity=0.240 Sum_probs=101.5
Q ss_pred chhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q 019692 123 GKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202 (337)
Q Consensus 123 d~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~ 202 (337)
|..+.++...+.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++++.+++. ++++.+|+....
T Consensus 182 d~~~~~ll~~l~~~~~~~VLDlGcG~G~~~~~la~~~-~~~~v~~vD~s~~~l~~a~~~~~~~~~~-~~~~~~d~~~~~- 258 (343)
T 2pjd_A 182 DVGSQLLLSTLTPHTKGKVLDVGCGAGVLSVAFARHS-PKIRLTLCDVSAPAVEASRATLAANGVE-GEVFASNVFSEV- 258 (343)
T ss_dssp CHHHHHHHHHSCTTCCSBCCBTTCTTSHHHHHHHHHC-TTCBCEEEESBHHHHHHHHHHHHHTTCC-CEEEECSTTTTC-
T ss_pred cHHHHHHHHhcCcCCCCeEEEecCccCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhCCC-CEEEEccccccc-
Confidence 3456777777777778899999999999999999874 4469999999999999999999998876 677888987643
Q ss_pred CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 203 ~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
.++||+|+++||..- |. . ........+++.+.+.+++ |.++.++.+..
T Consensus 259 ----~~~fD~Iv~~~~~~~-g~----------------------~----~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~ 307 (343)
T 2pjd_A 259 ----KGRFDMIISNPPFHD-GM----------------------Q----TSLDAAQTLIRGAVRHLNSGGELRIVANAFL 307 (343)
T ss_dssp ----CSCEEEEEECCCCCS-SS----------------------H----HHHHHHHHHHHHHGGGEEEEEEEEEEEETTS
T ss_pred ----cCCeeEEEECCCccc-Cc----------------------c----CCHHHHHHHHHHHHHhCCCCcEEEEEEcCCC
Confidence 257999999999531 10 0 0112346789999998887 88888777766
Q ss_pred cccCHHHHHHHh
Q 019692 282 QVENEDVIKSVL 293 (337)
Q Consensus 282 ~~ENe~vv~~~l 293 (337)
+. +...+...
T Consensus 308 ~~--~~~l~~~f 317 (343)
T 2pjd_A 308 PY--PDVLDETF 317 (343)
T ss_dssp SH--HHHHHHHH
T ss_pred Cc--HHHHHHhc
Confidence 53 34444444
No 128
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.14 E-value=5.1e-10 Score=107.39 Aligned_cols=106 Identities=11% Similarity=0.140 Sum_probs=82.0
Q ss_pred CchhhhcCeEEEechhh------HHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCC----------------------
Q 019692 110 VHPLIVNGCVFLQGKAS------SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG---------------------- 161 (337)
Q Consensus 110 ~~~~~~~G~~~~Qd~ss------~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~---------------------- 161 (337)
..++++.||-..|..+. ..+......+++..|+|.+||+|++.+.+|....+
T Consensus 161 g~~LhkRgyr~~~~~Apl~e~LAaall~l~~~~~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w 240 (384)
T 3ldg_A 161 GPSLFKRGYRTEKGGAPIKENMAAAIILLSNWFPDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALV 240 (384)
T ss_dssp SSCTTCCSCCCC---CCCCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHH
T ss_pred CCcccccCcccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHH
Confidence 34567777755554332 22334456788999999999999998888776432
Q ss_pred ---------------CCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEEEECCCC
Q 019692 162 ---------------KGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 162 ---------------~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
..+|+|+|+|+.+++.+++|++.+|+.+ |++.++|+.+++.. ..||+|++|||.
T Consensus 241 ~~~~~~a~~~~~~~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~----~~fD~Iv~NPPY 310 (384)
T 3ldg_A 241 TRVRNEADEQADYDIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTN----KINGVLISNPPY 310 (384)
T ss_dssp HHHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCC----CCSCEEEECCCC
T ss_pred HHHHHHHHHhhhccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCcc----CCcCEEEECCch
Confidence 1469999999999999999999999975 99999999987643 479999999996
No 129
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.14 E-value=4.9e-10 Score=98.26 Aligned_cols=117 Identities=14% Similarity=0.112 Sum_probs=85.7
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEeccCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-----NIEVLHGDFLNLDP 202 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-----~v~~~~~D~~~~~~ 202 (337)
.+...+...++.+|||+|||+|..+..+++.. +..+|+++|+++.+++.++++++..++. +++++++|+...+.
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (217)
T 3jwh_A 20 GVVAALKQSNARRVIDLGCGQGNLLKILLKDS-FFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDK 98 (217)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHHCT-TCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCG
T ss_pred HHHHHHHhcCCCEEEEeCCCCCHHHHHHHhhC-CCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccc
Confidence 34445555678999999999999999998853 3469999999999999999999888775 69999999865543
Q ss_pred CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 203 ~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
. .++||+|++.-. +.. .+.. ....+|+.+.+++++ |.++.+.+
T Consensus 99 ~---~~~fD~v~~~~~------l~~-----------------~~~~-------~~~~~l~~~~~~LkpgG~li~~~~ 142 (217)
T 3jwh_A 99 R---FHGYDAATVIEV------IEH-----------------LDLS-------RLGAFERVLFEFAQPKIVIVTTPN 142 (217)
T ss_dssp G---GCSCSEEEEESC------GGG-----------------CCHH-------HHHHHHHHHHTTTCCSEEEEEEEB
T ss_pred c---CCCcCEEeeHHH------HHc-----------------CCHH-------HHHHHHHHHHHHcCCCEEEEEccC
Confidence 2 257999996422 211 0111 125788889898887 55554444
No 130
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.13 E-value=5.9e-11 Score=106.25 Aligned_cols=130 Identities=18% Similarity=0.124 Sum_probs=92.6
Q ss_pred hcCeEEEechhhHHH---HHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEE
Q 019692 115 VNGCVFLQGKASSMV---AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE 191 (337)
Q Consensus 115 ~~G~~~~Qd~ss~l~---~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~ 191 (337)
..|.-++|+=..-+. +.++ ..+|.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++.+..+. +++
T Consensus 36 ~~g~~vm~~we~~~m~~~a~~~-~~~G~rVLdiG~G~G~~~~~~~~~~--~~~v~~id~~~~~~~~a~~~~~~~~~-~~~ 111 (236)
T 3orh_A 36 ILGKPVMERWETPYMHALAAAA-SSKGGRVLEVGFGMAIAASKVQEAP--IDEHWIIECNDGVFQRLRDWAPRQTH-KVI 111 (236)
T ss_dssp ETTEEEEEGGGHHHHHHHHHHH-TTTCEEEEEECCTTSHHHHHHTTSC--EEEEEEEECCHHHHHHHHHHGGGCSS-EEE
T ss_pred hcCHHHHHHHHHHHHHHHHHhh-ccCCCeEEEECCCccHHHHHHHHhC--CcEEEEEeCCHHHHHHHHHHHhhCCC-ceE
Confidence 345556665433322 2333 4679999999999999999888752 35899999999999999999987764 588
Q ss_pred EEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-
Q 019692 192 VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV- 270 (337)
Q Consensus 192 ~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~- 270 (337)
++.+|+.......+ .++||.|+.|+..+...... . .....+++++.++|+|
T Consensus 112 ~~~~~a~~~~~~~~-~~~FD~i~~D~~~~~~~~~~-~--------------------------~~~~~~~~e~~rvLkPG 163 (236)
T 3orh_A 112 PLKGLWEDVAPTLP-DGHFDGILYDTYPLSEETWH-T--------------------------HQFNFIKNHAFRLLKPG 163 (236)
T ss_dssp EEESCHHHHGGGSC-TTCEEEEEECCCCCBGGGTT-T--------------------------HHHHHHHHTHHHHEEEE
T ss_pred EEeehHHhhccccc-ccCCceEEEeeeecccchhh-h--------------------------cchhhhhhhhhheeCCC
Confidence 99999876543322 36799999998755433221 0 1135678888888887
Q ss_pred cEEEEE
Q 019692 271 ERVVYS 276 (337)
Q Consensus 271 G~lvYs 276 (337)
|.++|.
T Consensus 164 G~l~f~ 169 (236)
T 3orh_A 164 GVLTYC 169 (236)
T ss_dssp EEEEEC
T ss_pred CEEEEE
Confidence 788874
No 131
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.13 E-value=1.2e-09 Score=105.21 Aligned_cols=105 Identities=14% Similarity=0.218 Sum_probs=81.1
Q ss_pred chhhhcCeEEEechh------hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCC-----------------------
Q 019692 111 HPLIVNGCVFLQGKA------SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG----------------------- 161 (337)
Q Consensus 111 ~~~~~~G~~~~Qd~s------s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~----------------------- 161 (337)
.++++.|+-..|..+ +..+.......++..|||.+||+|++++.+|....+
T Consensus 169 ~~L~krgyr~~~~~Apl~e~lAa~ll~l~~~~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~ 248 (393)
T 3k0b_A 169 AGLHKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWA 248 (393)
T ss_dssp SCTTCCSTTTTSCSCSCCHHHHHHHHHHSCCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHH
T ss_pred CcccccccccCCCCCCCcHHHHHHHHHHhCCCCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHH
Confidence 345566654333222 233345566788999999999999998888876432
Q ss_pred --------------CCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEEEECCCC
Q 019692 162 --------------KGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 162 --------------~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
..+|+++|+|+.+++.+++|++.+|+.+ |+++++|+.+++.. .+||+|++|||.
T Consensus 249 ~~~~~a~~~~~~~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~----~~fD~Iv~NPPY 317 (393)
T 3k0b_A 249 DARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTE----DEYGVVVANPPY 317 (393)
T ss_dssp HHHHHHHHHCCTTCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCC----CCSCEEEECCCC
T ss_pred HHHHHHHHhhcccCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCC----CCCCEEEECCCC
Confidence 1469999999999999999999999975 99999999987643 479999999995
No 132
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.12 E-value=1.7e-10 Score=103.41 Aligned_cols=138 Identities=14% Similarity=0.055 Sum_probs=91.1
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH------hCCCcEEEEeccCCC-CCCCCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL------SGAANIEVLHGDFLN-LDPKDPAY 207 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~------~g~~~v~~~~~D~~~-~~~~~~~~ 207 (337)
..++.+|||+|||+|..+..+|... +...|+|+|+++.+++.++++++. .+..||.++.+|+.. ++...+ .
T Consensus 44 ~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~-~ 121 (235)
T 3ckk_A 44 AQAQVEFADIGCGYGGLLVELSPLF-PDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFY-K 121 (235)
T ss_dssp --CCEEEEEETCTTCHHHHHHGGGS-TTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCC-T
T ss_pred cCCCCeEEEEccCCcHHHHHHHHHC-CCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCC-C
Confidence 3467799999999999999998874 457999999999999999998875 467889999999987 331111 2
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCH
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENE 286 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe 286 (337)
+.||.|++.-|.. ... .+...-.-.+..+|+.+.++|++ |.++.+|+ ++
T Consensus 122 ~~~D~v~~~~~dp---------~~k---------------~~h~krr~~~~~~l~~~~~~LkpGG~l~~~td------~~ 171 (235)
T 3ckk_A 122 GQLTKMFFLFPDP---------HFK---------------RTKHKWRIISPTLLAEYAYVLRVGGLVYTITD------VL 171 (235)
T ss_dssp TCEEEEEEESCC-----------------------------------CCCHHHHHHHHHHEEEEEEEEEEES------CH
T ss_pred cCeeEEEEeCCCc---------hhh---------------hhhhhhhhhhHHHHHHHHHHCCCCCEEEEEeC------CH
Confidence 5799999865421 100 00000001135688888888887 77777665 34
Q ss_pred HHHHHHhch-hcCCCcEEe
Q 019692 287 DVIKSVLPI-AMSFGFQLA 304 (337)
Q Consensus 287 ~vv~~~l~~-~~~~~~~~~ 304 (337)
....++++. ..+.+|+..
T Consensus 172 ~~~~~~~~~l~~~~~f~~~ 190 (235)
T 3ckk_A 172 ELHDWMCTHFEEHPLFERV 190 (235)
T ss_dssp HHHHHHHHHHHTSTTEEEE
T ss_pred HHHHHHHHHHHHCCCcccc
Confidence 444444432 234457765
No 133
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.12 E-value=1.6e-10 Score=105.96 Aligned_cols=117 Identities=11% Similarity=0.104 Sum_probs=90.3
Q ss_pred hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC
Q 019692 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 126 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~ 205 (337)
+.+...+....++.+|||+|||+|..+..++....+..+|+++|+++.+++.+++++...+. +++++++|+.+++..
T Consensus 11 ~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~-- 87 (284)
T 3gu3_A 11 SFLVNTVWKITKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPY-DSEFLEGDATEIELN-- 87 (284)
T ss_dssp HHHHHTTSCCCSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSS-EEEEEESCTTTCCCS--
T ss_pred HHHHHHHhccCCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcchhhcCcC--
Confidence 34444445677899999999999999999998765457999999999999999999988775 799999999987642
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
++||+|++... +..-+| ...+|+++.+++++ |.++.....
T Consensus 88 --~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~~~~~ 128 (284)
T 3gu3_A 88 --DKYDIAICHAF------LLHMTT--------------------------PETMLQKMIHSVKKGGKIICFEPH 128 (284)
T ss_dssp --SCEEEEEEESC------GGGCSS--------------------------HHHHHHHHHHTEEEEEEEEEEECC
T ss_pred --CCeeEEEECCh------hhcCCC--------------------------HHHHHHHHHHHcCCCCEEEEEecc
Confidence 57999998643 111111 14778888888887 777766554
No 134
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.11 E-value=1.1e-10 Score=102.09 Aligned_cols=133 Identities=18% Similarity=0.234 Sum_probs=91.5
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh------------CCCcEEEEeccCCCC
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS------------GAANIEVLHGDFLNL 200 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~------------g~~~v~~~~~D~~~~ 200 (337)
+.+.++.+|||+|||+|..+..+++. ..+|+|+|+|+.|++.++++.+.. +..+|+++++|+.++
T Consensus 18 l~~~~~~~vLD~GCG~G~~~~~la~~---g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l 94 (203)
T 1pjz_A 18 LNVVPGARVLVPLCGKSQDMSWLSGQ---GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFAL 94 (203)
T ss_dssp HCCCTTCEEEETTTCCSHHHHHHHHH---CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSS
T ss_pred cccCCCCEEEEeCCCCcHhHHHHHHC---CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccC
Confidence 45678999999999999999999986 369999999999999999876431 235799999999987
Q ss_pred CCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 201 ~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
+..+ .++||+|++-. ++.. .+.+ .....+++..+++++ |.+++.|+.
T Consensus 95 ~~~~--~~~fD~v~~~~------~l~~-----------------l~~~-------~~~~~l~~~~r~LkpgG~~~l~~~~ 142 (203)
T 1pjz_A 95 TARD--IGHCAAFYDRA------AMIA-----------------LPAD-------MRERYVQHLEALMPQACSGLLITLE 142 (203)
T ss_dssp THHH--HHSEEEEEEES------CGGG-----------------SCHH-------HHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred Cccc--CCCEEEEEECc------chhh-----------------CCHH-------HHHHHHHHHHHHcCCCcEEEEEEEe
Confidence 6431 14799998522 1211 0111 124577888888887 775666655
Q ss_pred CCcc--------cCHHHHHHHhchhcCCCcEEe
Q 019692 280 IHQV--------ENEDVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 280 ~~~~--------ENe~vv~~~l~~~~~~~~~~~ 304 (337)
..+. -+++.+...++ . ||++.
T Consensus 143 ~~~~~~~~~~~~~~~~el~~~~~---~-gf~i~ 171 (203)
T 1pjz_A 143 YDQALLEGPPFSVPQTWLHRVMS---G-NWEVT 171 (203)
T ss_dssp SCSSSSSSCCCCCCHHHHHHTSC---S-SEEEE
T ss_pred cCccccCCCCCCCCHHHHHHHhc---C-CcEEE
Confidence 4321 13455666552 3 77764
No 135
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.11 E-value=9.3e-11 Score=104.37 Aligned_cols=111 Identities=9% Similarity=-0.010 Sum_probs=82.0
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCC-HHHHHHH---HHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELN-KERVRRL---KDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~-~~~l~~l---~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
.+++++|||+|||+|..+..++.. .+...|+|+|+| +.+++.+ ++++++.|+.|+.++.+|+..++... +..+
T Consensus 22 ~~~~~~vLDiGCG~G~~~~~la~~-~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~--~d~v 98 (225)
T 3p2e_A 22 GQFDRVHIDLGTGDGRNIYKLAIN-DQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFEL--KNIA 98 (225)
T ss_dssp TTCSEEEEEETCTTSHHHHHHHHT-CTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGG--TTCE
T ss_pred CCCCCEEEEEeccCcHHHHHHHHh-CCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhc--cCeE
Confidence 367899999999999999999875 345789999999 6666666 88888889989999999999885322 2568
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEE
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVY 275 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvY 275 (337)
|.|.+..|.. .........+..+|..+.+++++ |.++.
T Consensus 99 ~~i~~~~~~~---------------------------~~~~~~~~~~~~~l~~~~r~LkpGG~l~i 137 (225)
T 3p2e_A 99 DSISILFPWG---------------------------TLLEYVIKPNRDILSNVADLAKKEAHFEF 137 (225)
T ss_dssp EEEEEESCCH---------------------------HHHHHHHTTCHHHHHHHHTTEEEEEEEEE
T ss_pred EEEEEeCCCc---------------------------HHhhhhhcchHHHHHHHHHhcCCCcEEEE
Confidence 8888877611 11111111124678888899888 66666
No 136
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.10 E-value=3.4e-10 Score=104.34 Aligned_cols=96 Identities=25% Similarity=0.300 Sum_probs=80.2
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDF 197 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~ 197 (337)
|..+......++..+.+.++++|||+|||+|..|..+++. ..+|+|+|+|+.+++.++++++..|. .+++++++|+
T Consensus 10 fl~d~~i~~~i~~~~~~~~~~~VLDiG~G~G~lt~~L~~~---~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~D~ 86 (285)
T 1zq9_A 10 ILKNPLIINSIIDKAALRPTDVVLEVGPGTGNMTVKLLEK---AKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGDV 86 (285)
T ss_dssp EECCHHHHHHHHHHTCCCTTCEEEEECCTTSTTHHHHHHH---SSEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEESCT
T ss_pred ccCCHHHHHHHHHhcCCCCCCEEEEEcCcccHHHHHHHhh---CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcce
Confidence 3344555566677788889999999999999999999987 36899999999999999999987776 5799999999
Q ss_pred CCCCCCCCCCCCccEEEECCCCCCc
Q 019692 198 LNLDPKDPAYSEVRAILLDPSCSGS 222 (337)
Q Consensus 198 ~~~~~~~~~~~~fD~IlvDpPCSg~ 222 (337)
.+++. ..||.|++++|+..+
T Consensus 87 ~~~~~-----~~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 87 LKTDL-----PFFDTCVANLPYQIS 106 (285)
T ss_dssp TTSCC-----CCCSEEEEECCGGGH
T ss_pred ecccc-----hhhcEEEEecCcccc
Confidence 87642 368999999997654
No 137
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.10 E-value=3.3e-10 Score=104.90 Aligned_cols=94 Identities=17% Similarity=0.150 Sum_probs=77.9
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~ 198 (337)
|.....-...++..+++.++++|||+|||+|..|..+++. .++|+|+|+|+.+++.++++++ +..+++++++|+.
T Consensus 32 fL~d~~i~~~Iv~~l~~~~~~~VLEIG~G~G~lT~~La~~---~~~V~aVEid~~li~~a~~~~~--~~~~v~vi~gD~l 106 (295)
T 3gru_A 32 FLIDKNFVNKAVESANLTKDDVVLEIGLGKGILTEELAKN---AKKVYVIEIDKSLEPYANKLKE--LYNNIEIIWGDAL 106 (295)
T ss_dssp EECCHHHHHHHHHHTTCCTTCEEEEECCTTSHHHHHHHHH---SSEEEEEESCGGGHHHHHHHHH--HCSSEEEEESCTT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEECCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHhc--cCCCeEEEECchh
Confidence 4444444556677788899999999999999999999987 3799999999999999999987 3568999999999
Q ss_pred CCCCCCCCCCCccEEEECCCCC
Q 019692 199 NLDPKDPAYSEVRAILLDPSCS 220 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPCS 220 (337)
+++... ..||+|+.++|..
T Consensus 107 ~~~~~~---~~fD~Iv~NlPy~ 125 (295)
T 3gru_A 107 KVDLNK---LDFNKVVANLPYQ 125 (295)
T ss_dssp TSCGGG---SCCSEEEEECCGG
T ss_pred hCCccc---CCccEEEEeCccc
Confidence 876432 3699999999953
No 138
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.09 E-value=5.4e-10 Score=101.50 Aligned_cols=83 Identities=24% Similarity=0.340 Sum_probs=71.6
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
......++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...|+.+++++.+|+..++... ++|
T Consensus 31 ~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~---~~f 106 (276)
T 3mgg_A 31 HDTVYPPGAKVLEAGCGIGAQTVILAKNN-PDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFED---SSF 106 (276)
T ss_dssp TTCCCCTTCEEEETTCTTSHHHHHHHHHC-TTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCT---TCE
T ss_pred hcccCCCCCeEEEecCCCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCC---CCe
Confidence 33445789999999999999999999884 45799999999999999999999999989999999998876432 679
Q ss_pred cEEEECC
Q 019692 211 RAILLDP 217 (337)
Q Consensus 211 D~IlvDp 217 (337)
|+|++..
T Consensus 107 D~v~~~~ 113 (276)
T 3mgg_A 107 DHIFVCF 113 (276)
T ss_dssp EEEEEES
T ss_pred eEEEEec
Confidence 9999753
No 139
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.09 E-value=5.4e-10 Score=96.82 Aligned_cols=73 Identities=15% Similarity=0.286 Sum_probs=63.5
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
...++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++++ +++++++|+.+++ ++||+|
T Consensus 48 ~~~~~~~vlD~gcG~G~~~~~l~~~--~~~~v~~vD~~~~~~~~a~~~~~-----~~~~~~~d~~~~~------~~~D~v 114 (200)
T 1ne2_A 48 GNIGGRSVIDAGTGNGILACGSYLL--GAESVTAFDIDPDAIETAKRNCG-----GVNFMVADVSEIS------GKYDTW 114 (200)
T ss_dssp TSSBTSEEEEETCTTCHHHHHHHHT--TBSEEEEEESCHHHHHHHHHHCT-----TSEEEECCGGGCC------CCEEEE
T ss_pred CCCCCCEEEEEeCCccHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhcC-----CCEEEECcHHHCC------CCeeEE
Confidence 4567899999999999999999876 34689999999999999999875 6889999998863 469999
Q ss_pred EECCCC
Q 019692 214 LLDPSC 219 (337)
Q Consensus 214 lvDpPC 219 (337)
++|||.
T Consensus 115 ~~~~p~ 120 (200)
T 1ne2_A 115 IMNPPF 120 (200)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999994
No 140
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.09 E-value=9.9e-11 Score=104.33 Aligned_cols=130 Identities=15% Similarity=0.109 Sum_probs=88.7
Q ss_pred CeEEEechhhHHHHHH--hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEe
Q 019692 117 GCVFLQGKASSMVAAA--LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLH 194 (337)
Q Consensus 117 G~~~~Qd~ss~l~~~~--l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~ 194 (337)
|.-.+++-...++..+ +.+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++.+..+ .++.+++
T Consensus 38 ~~~~~~~~~~~~~~~l~~~~~~~~~~vLDiGcGtG~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~-~~v~~~~ 114 (236)
T 1zx0_A 38 GKPVMERWETPYMHALAAAASSKGGRVLEVGFGMAIAASKVQEA--PIDEHWIIECNDGVFQRLRDWAPRQT-HKVIPLK 114 (236)
T ss_dssp TEEEEEGGGHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHTS--CEEEEEEEECCHHHHHHHHHHGGGCS-SEEEEEE
T ss_pred chHHHHHHHHHHHHHHHhhcCCCCCeEEEEeccCCHHHHHHHhc--CCCeEEEEcCCHHHHHHHHHHHHhcC-CCeEEEe
Confidence 4444554443333222 22567899999999999999988664 23489999999999999999988777 5799999
Q ss_pred ccCCCC--CCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-c
Q 019692 195 GDFLNL--DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-E 271 (337)
Q Consensus 195 ~D~~~~--~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G 271 (337)
+|+.++ +..+ ++||+|++|.- +. .. ++. . ......+++++.+++++ |
T Consensus 115 ~d~~~~~~~~~~---~~fD~V~~d~~--~~-~~---~~~--------------~-------~~~~~~~l~~~~r~LkpgG 164 (236)
T 1zx0_A 115 GLWEDVAPTLPD---GHFDGILYDTY--PL-SE---ETW--------------H-------THQFNFIKNHAFRLLKPGG 164 (236)
T ss_dssp SCHHHHGGGSCT---TCEEEEEECCC--CC-BG---GGT--------------T-------THHHHHHHHTHHHHEEEEE
T ss_pred cCHHHhhcccCC---CceEEEEECCc--cc-ch---hhh--------------h-------hhhHHHHHHHHHHhcCCCe
Confidence 998876 3222 57999999721 11 11 000 0 01124578888888887 7
Q ss_pred EEEEEcCC
Q 019692 272 RVVYSTCS 279 (337)
Q Consensus 272 ~lvYsTCS 279 (337)
.+++..++
T Consensus 165 ~l~~~~~~ 172 (236)
T 1zx0_A 165 VLTYCNLT 172 (236)
T ss_dssp EEEECCHH
T ss_pred EEEEEecC
Confidence 88876544
No 141
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.09 E-value=7.1e-10 Score=101.92 Aligned_cols=115 Identities=18% Similarity=0.142 Sum_probs=88.9
Q ss_pred HHHHHHh----CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCC
Q 019692 127 SMVAAAL----APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLD 201 (337)
Q Consensus 127 ~l~~~~l----~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~ 201 (337)
..+...+ .+.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+. +++++.+|+.+++
T Consensus 68 ~~l~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 145 (297)
T 2o57_A 68 EWLASELAMTGVLQRQAKGLDLGAGYGGAARFLVRKF--GVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIP 145 (297)
T ss_dssp HHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCS
T ss_pred HHHHHHhhhccCCCCCCEEEEeCCCCCHHHHHHHHHh--CCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCC
Confidence 3444455 77889999999999999999999875 359999999999999999999999884 6999999998876
Q ss_pred CCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 202 ~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
..+ ++||+|++.- ++..-++ ...+|+.+.+++++ |.++.++.
T Consensus 146 ~~~---~~fD~v~~~~------~l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~~~~ 188 (297)
T 2o57_A 146 CED---NSYDFIWSQD------AFLHSPD--------------------------KLKVFQECARVLKPRGVMAITDP 188 (297)
T ss_dssp SCT---TCEEEEEEES------CGGGCSC--------------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCC---CCEeEEEecc------hhhhcCC--------------------------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 432 5799999642 1211111 24678888888887 77777754
No 142
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.09 E-value=8.4e-11 Score=113.37 Aligned_cols=83 Identities=23% Similarity=0.277 Sum_probs=69.2
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--CCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
.+|.+|||+|||+|..++.++.. .++|+++|+|+.+++.+++|++.+ |+++|+++++|+.++..... ..+||+|
T Consensus 92 ~~g~~VLDLgcG~G~~al~LA~~---g~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~-~~~fDvV 167 (410)
T 3ll7_A 92 REGTKVVDLTGGLGIDFIALMSK---ASQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIK-TFHPDYI 167 (410)
T ss_dssp CTTCEEEESSCSSSHHHHHHHTT---CSEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHH-HHCCSEE
T ss_pred CCCCEEEEeCCCchHHHHHHHhc---CCEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhcc-CCCceEE
Confidence 35899999999999999988875 479999999999999999999999 98889999999987522100 1369999
Q ss_pred EECCCCCCc
Q 019692 214 LLDPSCSGS 222 (337)
Q Consensus 214 lvDpPCSg~ 222 (337)
++|||..+.
T Consensus 168 ~lDPPrr~~ 176 (410)
T 3ll7_A 168 YVDPARRSG 176 (410)
T ss_dssp EECCEEC--
T ss_pred EECCCCcCC
Confidence 999998774
No 143
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.09 E-value=4e-10 Score=98.83 Aligned_cols=85 Identities=21% Similarity=0.242 Sum_probs=68.4
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEeccCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-----NIEVLHGDFLNLDP 202 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-----~v~~~~~D~~~~~~ 202 (337)
.+...+...++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...++. +++++.+|+...+.
T Consensus 20 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~~-~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~ 98 (219)
T 3jwg_A 20 TVVAVLKSVNAKKVIDLGCGEGNLLSLLLKDK-SFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDK 98 (219)
T ss_dssp HHHHHHHHTTCCEEEEETCTTCHHHHHHHTST-TCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCG
T ss_pred HHHHHHhhcCCCEEEEecCCCCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCccccccc
Confidence 33444555678999999999999999998753 3469999999999999999999877765 79999999865543
Q ss_pred CCCCCCCccEEEEC
Q 019692 203 KDPAYSEVRAILLD 216 (337)
Q Consensus 203 ~~~~~~~fD~IlvD 216 (337)
. .++||+|++.
T Consensus 99 ~---~~~fD~V~~~ 109 (219)
T 3jwg_A 99 R---FSGYDAATVI 109 (219)
T ss_dssp G---GTTCSEEEEE
T ss_pred c---cCCCCEEEEH
Confidence 2 2579999963
No 144
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.08 E-value=3.6e-10 Score=103.40 Aligned_cols=80 Identities=19% Similarity=0.135 Sum_probs=69.1
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
..+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...|+ +++++++|+.+.+. .++|
T Consensus 114 ~~~~~~~~~~vLD~GcG~G~~~~~l~~~---g~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~----~~~f 185 (286)
T 3m70_A 114 DAAKIISPCKVLDLGCGQGRNSLYLSLL---GYDVTSWDHNENSIAFLNETKEKENL-NISTALYDINAANI----QENY 185 (286)
T ss_dssp HHHHHSCSCEEEEESCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCGGGCCC----CSCE
T ss_pred HHhhccCCCcEEEECCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHHcCC-ceEEEEeccccccc----cCCc
Confidence 3344457899999999999999999886 35999999999999999999999998 89999999988765 2679
Q ss_pred cEEEECCC
Q 019692 211 RAILLDPS 218 (337)
Q Consensus 211 D~IlvDpP 218 (337)
|+|++..+
T Consensus 186 D~i~~~~~ 193 (286)
T 3m70_A 186 DFIVSTVV 193 (286)
T ss_dssp EEEEECSS
T ss_pred cEEEEccc
Confidence 99998765
No 145
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=99.08 E-value=7.6e-10 Score=95.16 Aligned_cols=113 Identities=17% Similarity=0.147 Sum_probs=80.7
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCC--------CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-eccCCCCCCC--
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGK--------GKIVACELNKERVRRLKDTIKLSGAANIEVL-HGDFLNLDPK-- 203 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~--------g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~-~~D~~~~~~~-- 203 (337)
+++|.+|||+|||+|..+..+++.++.. ++|+++|+++.+ ...+++++ .+|+......
T Consensus 20 ~~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~-----------~~~~~~~~~~~d~~~~~~~~~ 88 (196)
T 2nyu_A 20 LRPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF-----------PLEGATFLCPADVTDPRTSQR 88 (196)
T ss_dssp CCTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC-----------CCTTCEEECSCCTTSHHHHHH
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc-----------cCCCCeEEEeccCCCHHHHHH
Confidence 5789999999999999999999987543 799999999842 34568888 8887654310
Q ss_pred ---CCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 204 ---DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 204 ---~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
.....+||+|++|+++..+|.. ..+......++..+++.+.+++++ |.++.+++.
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 147 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFR---------------------DLDHDRLISLCLTLLSVTPDILQPGGTFLCKTWA 147 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCH---------------------HHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCc---------------------ccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEecC
Confidence 0001479999999865554421 112223445667889999998887 788876653
No 146
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.07 E-value=2.3e-10 Score=97.11 Aligned_cols=81 Identities=20% Similarity=0.218 Sum_probs=63.5
Q ss_pred chhhHHHHHHhCC--CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 019692 123 GKASSMVAAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200 (337)
Q Consensus 123 d~ss~l~~~~l~~--~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~ 200 (337)
.+.+.+++..+.. .++.+|||+|||+|..+..++... +|+|+|+|+.+++. ..+++++++|+.+.
T Consensus 7 ~~~~~~l~~~l~~~~~~~~~vLD~GcG~G~~~~~l~~~~----~v~gvD~s~~~~~~---------~~~~~~~~~d~~~~ 73 (170)
T 3q87_B 7 GEDTYTLMDALEREGLEMKIVLDLGTSTGVITEQLRKRN----TVVSTDLNIRALES---------HRGGNLVRADLLCS 73 (170)
T ss_dssp CHHHHHHHHHHHHHTCCSCEEEEETCTTCHHHHHHTTTS----EEEEEESCHHHHHT---------CSSSCEEECSTTTT
T ss_pred CccHHHHHHHHHhhcCCCCeEEEeccCccHHHHHHHhcC----cEEEEECCHHHHhc---------ccCCeEEECChhhh
Confidence 3444455555655 678899999999999999888752 99999999999987 35688999999873
Q ss_pred CCCCCCCCCccEEEECCCCC
Q 019692 201 DPKDPAYSEVRAILLDPSCS 220 (337)
Q Consensus 201 ~~~~~~~~~fD~IlvDpPCS 220 (337)
.. .++||+|+++||..
T Consensus 74 ~~----~~~fD~i~~n~~~~ 89 (170)
T 3q87_B 74 IN----QESVDVVVFNPPYV 89 (170)
T ss_dssp BC----GGGCSEEEECCCCB
T ss_pred cc----cCCCCEEEECCCCc
Confidence 22 15799999999954
No 147
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.07 E-value=2.9e-10 Score=107.43 Aligned_cols=81 Identities=17% Similarity=0.185 Sum_probs=68.5
Q ss_pred HhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCc
Q 019692 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
.+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+ ++|+++.+|+.+++... ++|
T Consensus 59 ~~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~---~~~ 132 (340)
T 2fyt_A 59 NPHIFKDKVVLDVGCGTGILSMFAAKA--GAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPV---EKV 132 (340)
T ss_dssp CGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSC---SCE
T ss_pred hhhhcCCCEEEEeeccCcHHHHHHHHc--CCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCC---CcE
Confidence 344578999999999999999988885 346999999996 99999999999998 67999999998875332 579
Q ss_pred cEEEECCC
Q 019692 211 RAILLDPS 218 (337)
Q Consensus 211 D~IlvDpP 218 (337)
|+|++++.
T Consensus 133 D~Ivs~~~ 140 (340)
T 2fyt_A 133 DVIISEWM 140 (340)
T ss_dssp EEEEECCC
T ss_pred EEEEEcCc
Confidence 99999863
No 148
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.07 E-value=3.6e-10 Score=102.24 Aligned_cols=122 Identities=16% Similarity=0.244 Sum_probs=90.7
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+.++.+|||+|||+|..+..++.. + .+|+++|+++.+++.+++|++.+|+. +++..+|+.+..+ ..+||+|+
T Consensus 118 ~~~~~~VLDiGcG~G~l~~~la~~--g-~~v~gvDi~~~~v~~a~~n~~~~~~~-v~~~~~d~~~~~~----~~~fD~Vv 189 (254)
T 2nxc_A 118 LRPGDKVLDLGTGSGVLAIAAEKL--G-GKALGVDIDPMVLPQAEANAKRNGVR-PRFLEGSLEAALP----FGPFDLLV 189 (254)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT--T-CEEEEEESCGGGHHHHHHHHHHTTCC-CEEEESCHHHHGG----GCCEEEEE
T ss_pred cCCCCEEEEecCCCcHHHHHHHHh--C-CeEEEEECCHHHHHHHHHHHHHcCCc-EEEEECChhhcCc----CCCCCEEE
Confidence 567899999999999999988875 2 39999999999999999999999987 8999998876321 15799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHh
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVL 293 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l 293 (337)
++++.. ....++..+.+++++ |.++.+... .+..+.+...+
T Consensus 190 ~n~~~~-----------------------------------~~~~~l~~~~~~LkpgG~lils~~~---~~~~~~v~~~l 231 (254)
T 2nxc_A 190 ANLYAE-----------------------------------LHAALAPRYREALVPGGRALLTGIL---KDRAPLVREAM 231 (254)
T ss_dssp EECCHH-----------------------------------HHHHHHHHHHHHEEEEEEEEEEEEE---GGGHHHHHHHH
T ss_pred ECCcHH-----------------------------------HHHHHHHHHHHHcCCCCEEEEEeec---cCCHHHHHHHH
Confidence 876510 014677788787777 777765433 23455555555
Q ss_pred chhcCCCcEEec
Q 019692 294 PIAMSFGFQLAT 305 (337)
Q Consensus 294 ~~~~~~~~~~~~ 305 (337)
+ ..||++..
T Consensus 232 ~---~~Gf~~~~ 240 (254)
T 2nxc_A 232 A---GAGFRPLE 240 (254)
T ss_dssp H---HTTCEEEE
T ss_pred H---HCCCEEEE
Confidence 3 35777753
No 149
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.07 E-value=4.6e-10 Score=98.17 Aligned_cols=132 Identities=14% Similarity=0.157 Sum_probs=95.7
Q ss_pred hhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC
Q 019692 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204 (337)
Q Consensus 125 ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~ 204 (337)
-..++...+...++.+|||+|||+|..+..++... .+|+++|+++.+++.+++++...+ +++++++|+.++++
T Consensus 39 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~-- 111 (216)
T 3ofk_A 39 HTQLLRLSLSSGAVSNGLEIGCAAGAFTEKLAPHC---KRLTVIDVMPRAIGRACQRTKRWS--HISWAATDILQFST-- 111 (216)
T ss_dssp HHHHHHHHTTTSSEEEEEEECCTTSHHHHHHGGGE---EEEEEEESCHHHHHHHHHHTTTCS--SEEEEECCTTTCCC--
T ss_pred HHHHHHHHcccCCCCcEEEEcCCCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHhcccCC--CeEEEEcchhhCCC--
Confidence 34455556777788999999999999999988763 589999999999999999987654 79999999998872
Q ss_pred CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC-----
Q 019692 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC----- 278 (337)
Q Consensus 205 ~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC----- 278 (337)
.++||+|++.. ++..-+ +++ ....+|..+.+++++ |.++++|.
T Consensus 112 --~~~fD~v~~~~------~l~~~~----------------~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~~~ 160 (216)
T 3ofk_A 112 --AELFDLIVVAE------VLYYLE----------------DMT-------QMRTAIDNMVKMLAPGGHLVFGSARDATC 160 (216)
T ss_dssp --SCCEEEEEEES------CGGGSS----------------SHH-------HHHHHHHHHHHTEEEEEEEEEEEECHHHH
T ss_pred --CCCccEEEEcc------HHHhCC----------------CHH-------HHHHHHHHHHHHcCCCCEEEEEecCCCcc
Confidence 26799999752 221110 111 124678888888887 77777652
Q ss_pred -CCCcccCHHHHHHHhc
Q 019692 279 -SIHQVENEDVIKSVLP 294 (337)
Q Consensus 279 -S~~~~ENe~vv~~~l~ 294 (337)
++....+.+.+..++.
T Consensus 161 ~~~~~~~~~~~~~~~~~ 177 (216)
T 3ofk_A 161 RRWGHVAGAETVITILT 177 (216)
T ss_dssp HHTTCSCCHHHHHHHHH
T ss_pred hhhhhhhhHHHHHHHHH
Confidence 3344556666666664
No 150
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.07 E-value=3.5e-10 Score=100.16 Aligned_cols=110 Identities=11% Similarity=0.101 Sum_probs=85.0
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..++.+|||+|||+|..+..++... +..+|+++|+++.+++.+++++...+ ++.++++|+.+++.. ++||+|+
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~--~~~~~~~d~~~~~~~----~~fD~v~ 114 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKY-PEATFTLVDMSEKMLEIAKNRFRGNL--KVKYIEADYSKYDFE----EKYDMVV 114 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHC-TTCEEEEEESCHHHHHHHHHHTCSCT--TEEEEESCTTTCCCC----SCEEEEE
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhC-CCCeEEEEECCHHHHHHHHHhhccCC--CEEEEeCchhccCCC----CCceEEE
Confidence 5678999999999999999999985 45799999999999999999987665 799999999887643 5799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
+... +..- +.. ....+|+++.+++++ |.++.++....
T Consensus 115 ~~~~------l~~~-----------------~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~ 152 (234)
T 3dtn_A 115 SALS------IHHL-----------------EDE-------DKKELYKRSYSILKESGIFINADLVHG 152 (234)
T ss_dssp EESC------GGGS-----------------CHH-------HHHHHHHHHHHHEEEEEEEEEEEECBC
T ss_pred EeCc------cccC-----------------CHH-------HHHHHHHHHHHhcCCCcEEEEEEecCC
Confidence 8643 1110 011 113678888888887 78887765543
No 151
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.06 E-value=4.8e-10 Score=98.47 Aligned_cols=107 Identities=16% Similarity=0.170 Sum_probs=82.5
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++++..+ .+++++++|+.+++.. .++||+|++
T Consensus 37 ~~~~~vLDlG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~---~~~~D~v~~ 109 (227)
T 1ve3_A 37 KKRGKVLDLACGVGGFSFLLEDYG---FEVVGVDISEDMIRKAREYAKSRE-SNVEFIVGDARKLSFE---DKTFDYVIF 109 (227)
T ss_dssp CSCCEEEEETCTTSHHHHHHHHTT---CEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCTTSCCSC---TTCEEEEEE
T ss_pred CCCCeEEEEeccCCHHHHHHHHcC---CEEEEEECCHHHHHHHHHHHHhcC-CCceEEECchhcCCCC---CCcEEEEEE
Confidence 458899999999999999888862 389999999999999999999887 6799999999886532 257999998
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
.++.. .. ...+ ...+|+++.+++++ |.++..++.
T Consensus 110 ~~~~~---~~--------------------~~~~-------~~~~l~~~~~~L~~gG~l~~~~~~ 144 (227)
T 1ve3_A 110 IDSIV---HF--------------------EPLE-------LNQVFKEVRRVLKPSGKFIMYFTD 144 (227)
T ss_dssp ESCGG---GC--------------------CHHH-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCchH---hC--------------------CHHH-------HHHHHHHHHHHcCCCcEEEEEecC
Confidence 86511 00 1111 24678888887776 788777654
No 152
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.05 E-value=1.5e-09 Score=108.56 Aligned_cols=108 Identities=17% Similarity=0.214 Sum_probs=88.1
Q ss_pred hcCeEEEechhhHHHHHHhC----CCCCCeEEeecCCchhHHHHHHHHcC--CCCEEEEEeCCHHHHHHHHHHHHHhCC-
Q 019692 115 VNGCVFLQGKASSMVAAALA----PKPGWKVLDACSAPGNKTVHLAALMK--GKGKIVACELNKERVRRLKDTIKLSGA- 187 (337)
Q Consensus 115 ~~G~~~~Qd~ss~l~~~~l~----~~~g~~VLDl~aG~G~kt~~la~~~~--~~g~V~avD~~~~~l~~l~~~~~~~g~- 187 (337)
+.|.|+-...-+.+++.++. +.++.+|+|.|||+|++.+.++..+. +...++|+|+++.+++.++.|+...|+
T Consensus 195 ~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~gi~ 274 (542)
T 3lkd_A 195 KAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHGVP 274 (542)
T ss_dssp CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTTCC
T ss_pred cCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcCCC
Confidence 45778777777888888877 56889999999999999988888864 246899999999999999999999998
Q ss_pred -CcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCc
Q 019692 188 -ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222 (337)
Q Consensus 188 -~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~ 222 (337)
.++.+.++|....+.......+||+|+.+||.++.
T Consensus 275 ~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~ 310 (542)
T 3lkd_A 275 IENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAK 310 (542)
T ss_dssp GGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCC
T ss_pred cCccceEecceecccccccccccccEEEecCCcCCc
Confidence 46899999987663111113679999999999853
No 153
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.05 E-value=5.7e-10 Score=106.93 Aligned_cols=108 Identities=16% Similarity=0.231 Sum_probs=84.8
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh-----C-C--CcEEEEeccCCCC------
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-----G-A--ANIEVLHGDFLNL------ 200 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~-----g-~--~~v~~~~~D~~~~------ 200 (337)
+.++.+|||+|||+|..+..++...++.++|+++|+++.+++.++++++.+ | . .+|+++.+|+.++
T Consensus 81 ~~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~ 160 (383)
T 4fsd_A 81 SLEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPE 160 (383)
T ss_dssp GGTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSC
T ss_pred CCCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccC
Confidence 467899999999999999999998766689999999999999999998876 4 3 5799999999886
Q ss_pred CCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 201 DPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 201 ~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
+.. .++||+|+++.. +..-+| ...+|+.+.+++++ |.++.++
T Consensus 161 ~~~---~~~fD~V~~~~~------l~~~~d--------------------------~~~~l~~~~r~LkpgG~l~i~~ 203 (383)
T 4fsd_A 161 GVP---DSSVDIVISNCV------CNLSTN--------------------------KLALFKEIHRVLRDGGELYFSD 203 (383)
T ss_dssp CCC---TTCEEEEEEESC------GGGCSC--------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCC---CCCEEEEEEccc------hhcCCC--------------------------HHHHHHHHHHHcCCCCEEEEEE
Confidence 322 257999998643 211111 14788888888887 7777764
No 154
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.05 E-value=5.3e-10 Score=105.88 Aligned_cols=114 Identities=18% Similarity=0.125 Sum_probs=86.4
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCC
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSE 209 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~ 209 (337)
..+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+ ++|+++.+|+.+++.. ++
T Consensus 44 ~~l~~~~~~~VLDiGcGtG~ls~~la~~--g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~----~~ 116 (348)
T 2y1w_A 44 QNHTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP----EQ 116 (348)
T ss_dssp HTGGGTTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SC
T ss_pred hccccCCcCEEEEcCCCccHHHHHHHhC--CCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCC----Cc
Confidence 3345568999999999999999988875 456999999996 88999999999998 5799999999887532 47
Q ss_pred ccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 210 fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
||+|+++++..... ..+ ....+..+.+++++ |.++.+++++.
T Consensus 117 ~D~Ivs~~~~~~~~----~~~--------------------------~~~~l~~~~~~LkpgG~li~~~~~~~ 159 (348)
T 2y1w_A 117 VDIIISEPMGYMLF----NER--------------------------MLESYLHAKKYLKPSGNMFPTIGDVH 159 (348)
T ss_dssp EEEEEECCCBTTBT----TTS--------------------------HHHHHHHGGGGEEEEEEEESCEEEEE
T ss_pred eeEEEEeCchhcCC----hHH--------------------------HHHHHHHHHhhcCCCeEEEEecCcEE
Confidence 99999987733211 000 13556777788887 77776666654
No 155
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.05 E-value=1.7e-09 Score=93.44 Aligned_cols=106 Identities=12% Similarity=0.121 Sum_probs=82.1
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..++ +|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..+. ++.++.+|+.+.+.. .++||+|+
T Consensus 28 ~~~~-~vLdiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~---~~~fD~v~ 99 (202)
T 2kw5_A 28 IPQG-KILCLAEGEGRNACFLASL---GYEVTAVDQSSVGLAKAKQLAQEKGV-KITTVQSNLADFDIV---ADAWEGIV 99 (202)
T ss_dssp SCSS-EEEECCCSCTHHHHHHHTT---TCEEEEECSSHHHHHHHHHHHHHHTC-CEEEECCBTTTBSCC---TTTCSEEE
T ss_pred CCCC-CEEEECCCCCHhHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEEcChhhcCCC---cCCccEEE
Confidence 4567 9999999999999888875 36999999999999999999998887 799999999887533 25799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
+... .+ ..+ ....+|+.+.+++++ |.++.++.+.
T Consensus 100 ~~~~-----~~--------------------~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~ 134 (202)
T 2kw5_A 100 SIFC-----HL--------------------PSS-------LRQQLYPKVYQGLKPGGVFILEGFAP 134 (202)
T ss_dssp EECC-----CC--------------------CHH-------HHHHHHHHHHTTCCSSEEEEEEEECT
T ss_pred EEhh-----cC--------------------CHH-------HHHHHHHHHHHhcCCCcEEEEEEecc
Confidence 7311 11 111 235788889998887 7777776543
No 156
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.05 E-value=8.5e-10 Score=100.06 Aligned_cols=92 Identities=15% Similarity=0.174 Sum_probs=72.9
Q ss_pred hhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHH------HHHHHHHHHHHhCC-CcEEEEecc
Q 019692 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKE------RVRRLKDTIKLSGA-ANIEVLHGD 196 (337)
Q Consensus 124 ~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~------~l~~l~~~~~~~g~-~~v~~~~~D 196 (337)
.....+...+.+.++.+|||+|||+|..+..++...++.++|+++|+++. +++.++++++..|+ .+|+++.+|
T Consensus 30 ~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d 109 (275)
T 3bkx_A 30 AHRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNT 109 (275)
T ss_dssp HHHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSC
T ss_pred HHHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECC
Confidence 33344556677889999999999999999999998655589999999997 99999999998887 579999998
Q ss_pred -CC--CCCCCCCCCCCccEEEECCC
Q 019692 197 -FL--NLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 197 -~~--~~~~~~~~~~~fD~IlvDpP 218 (337)
.. .++.. .++||+|++...
T Consensus 110 ~~~~~~~~~~---~~~fD~v~~~~~ 131 (275)
T 3bkx_A 110 NLSDDLGPIA---DQHFDRVVLAHS 131 (275)
T ss_dssp CTTTCCGGGT---TCCCSEEEEESC
T ss_pred hhhhccCCCC---CCCEEEEEEccc
Confidence 32 22211 257999997544
No 157
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.05 E-value=4.3e-10 Score=106.58 Aligned_cols=112 Identities=13% Similarity=0.048 Sum_probs=85.4
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
..++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++.+|+.+ |+++++|+.+++.. .++||+|
T Consensus 64 ~~~~~~VLDvGcG~G~~~~~la~~--g~~~v~gvD~s-~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~---~~~fD~I 137 (349)
T 3q7e_A 64 LFKDKVVLDVGSGTGILCMFAAKA--GARKVIGIECS-SISDYAVKIVKANKLDHVVTIIKGKVEEVELP---VEKVDII 137 (349)
T ss_dssp HHTTCEEEEESCTTSHHHHHHHHT--TCSEEEEEECS-THHHHHHHHHHHTTCTTTEEEEESCTTTCCCS---SSCEEEE
T ss_pred cCCCCEEEEEeccchHHHHHHHHC--CCCEEEEECcH-HHHHHHHHHHHHcCCCCcEEEEECcHHHccCC---CCceEEE
Confidence 457899999999999999999886 45699999999 59999999999999876 99999999988543 2679999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
++++...... ...+ ...++..+.+++++ |.++.+.+++.
T Consensus 138 is~~~~~~l~---~~~~--------------------------~~~~l~~~~r~LkpgG~li~~~~~~~ 177 (349)
T 3q7e_A 138 ISEWMGYCLF---YESM--------------------------LNTVLHARDKWLAPDGLIFPDRATLY 177 (349)
T ss_dssp EECCCBBTBT---BTCC--------------------------HHHHHHHHHHHEEEEEEEESCEEEEE
T ss_pred EEcccccccc---Cchh--------------------------HHHHHHHHHHhCCCCCEEccccceEE
Confidence 9987533211 0000 13567777777776 77776655543
No 158
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.04 E-value=1.1e-09 Score=101.69 Aligned_cols=117 Identities=13% Similarity=0.122 Sum_probs=89.3
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 206 (337)
.+...+.+.++.+|||+|||+|..+..+++.. ..+|+++|+++.+++.++++++..|+. ++.++.+|+.+++
T Consensus 81 ~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~--~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~----- 153 (318)
T 2fk8_A 81 LNLDKLDLKPGMTLLDIGCGWGTTMRRAVERF--DVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA----- 153 (318)
T ss_dssp HHHTTSCCCTTCEEEEESCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC-----
T ss_pred HHHHhcCCCCcCEEEEEcccchHHHHHHHHHC--CCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC-----
Confidence 33444667889999999999999999999876 359999999999999999999998885 4999999998764
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCc
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQ 282 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~ 282 (337)
++||+|++.-. +..-+ . .....+|+.+.+++++ |.++.++.+...
T Consensus 154 -~~fD~v~~~~~------l~~~~-----------------~-------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~ 199 (318)
T 2fk8_A 154 -EPVDRIVSIEA------FEHFG-----------------H-------ENYDDFFKRCFNIMPADGRMTVQSSVSYH 199 (318)
T ss_dssp -CCCSEEEEESC------GGGTC-----------------G-------GGHHHHHHHHHHHSCTTCEEEEEEEECCC
T ss_pred -CCcCEEEEeCh------HHhcC-----------------H-------HHHHHHHHHHHHhcCCCcEEEEEEeccCC
Confidence 46999997532 21100 0 0125678888887776 888887766543
No 159
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.04 E-value=2.4e-10 Score=100.31 Aligned_cols=114 Identities=16% Similarity=0.133 Sum_probs=80.8
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH----HHhCCCcEEEEeccCCCCCCCCCC
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI----KLSGAANIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~----~~~g~~~v~~~~~D~~~~~~~~~~ 206 (337)
..+.++++.+|||+|||+|..+..++... +..+|+++|+++.+++.+.+++ ...+..+++++++|+.+++...
T Consensus 21 ~~l~~~~~~~vLDiGcG~G~~~~~la~~~-p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~-- 97 (218)
T 3mq2_A 21 EQLRSQYDDVVLDVGTGDGKHPYKVARQN-PSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLS-- 97 (218)
T ss_dssp HHHHTTSSEEEEEESCTTCHHHHHHHHHC-TTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCC--
T ss_pred HHhhccCCCEEEEecCCCCHHHHHHHHHC-CCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCC--
Confidence 34557889999999999999999999974 4579999999999888654433 3467778999999999876532
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEE
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYS 276 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYs 276 (337)
.. |.|++..+... .......-+..+|+.+.+++++ |.++++
T Consensus 98 -~~-d~v~~~~~~~~---------------------------~~~~~~~~~~~~l~~~~~~LkpgG~l~~~ 139 (218)
T 3mq2_A 98 -GV-GELHVLMPWGS---------------------------LLRGVLGSSPEMLRGMAAVCRPGASFLVA 139 (218)
T ss_dssp -CE-EEEEEESCCHH---------------------------HHHHHHTSSSHHHHHHHHTEEEEEEEEEE
T ss_pred -CC-CEEEEEccchh---------------------------hhhhhhccHHHHHHHHHHHcCCCcEEEEE
Confidence 34 77775554111 0001111125778888888887 666553
No 160
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.03 E-value=2.1e-10 Score=106.27 Aligned_cols=113 Identities=13% Similarity=0.014 Sum_probs=86.2
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
.+.++.+|||+|||+|..+..++....+..+|+++|+++.+++.++++++..|+.+ |+++++|+.+++.. ++||+
T Consensus 115 ~l~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD~ 190 (305)
T 3ocj_A 115 HLRPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTR----EGYDL 190 (305)
T ss_dssp HCCTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCC----SCEEE
T ss_pred hCCCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCcc----CCeEE
Confidence 45789999999999999999886434456799999999999999999999988865 99999999987632 57999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
|++..+ +..-+ ++ ..+..+++.+.+.+++ |.++.++.+
T Consensus 191 v~~~~~------~~~~~----------------~~-------~~~~~~l~~~~~~LkpgG~l~i~~~~ 229 (305)
T 3ocj_A 191 LTSNGL------NIYEP----------------DD-------ARVTELYRRFWQALKPGGALVTSFLT 229 (305)
T ss_dssp EECCSS------GGGCC----------------CH-------HHHHHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCh------hhhcC----------------CH-------HHHHHHHHHHHHhcCCCeEEEEEecC
Confidence 996543 11111 11 1134578888888887 777776633
No 161
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.03 E-value=4.3e-11 Score=108.85 Aligned_cols=91 Identities=22% Similarity=0.237 Sum_probs=72.6
Q ss_pred hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCH-------HHHHHHHHHHHHhCCCc-EEEEeccC
Q 019692 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK-------ERVRRLKDTIKLSGAAN-IEVLHGDF 197 (337)
Q Consensus 126 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~-------~~l~~l~~~~~~~g~~~-v~~~~~D~ 197 (337)
..+...++.+.++.+|||+|||+|..++.+|.. .++|+++|+++ .+++.+++|++.+|+.+ |+++++|+
T Consensus 72 ~~~l~~a~~~~~~~~VLDlgcG~G~~a~~lA~~---g~~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~ 148 (258)
T 2r6z_A 72 GELIAKAVNHTAHPTVWDATAGLGRDSFVLASL---GLTVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNA 148 (258)
T ss_dssp -CHHHHHTTGGGCCCEEETTCTTCHHHHHHHHT---TCCEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCH
T ss_pred hHHHHHHhCcCCcCeEEEeeCccCHHHHHHHHh---CCEEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCH
Confidence 345555566667899999999999999999985 36899999999 99999999999888855 99999998
Q ss_pred CCCCCCCCCC--CCccEEEECCCCC
Q 019692 198 LNLDPKDPAY--SEVRAILLDPSCS 220 (337)
Q Consensus 198 ~~~~~~~~~~--~~fD~IlvDpPCS 220 (337)
.++.+..+ . .+||+|++|||..
T Consensus 149 ~~~l~~~~-~~~~~fD~V~~dP~~~ 172 (258)
T 2r6z_A 149 AEQMPALV-KTQGKPDIVYLDPMYP 172 (258)
T ss_dssp HHHHHHHH-HHHCCCSEEEECCCC-
T ss_pred HHHHHhhh-ccCCCccEEEECCCCC
Confidence 87532110 0 3699999999853
No 162
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.03 E-value=1.8e-09 Score=98.70 Aligned_cols=114 Identities=15% Similarity=0.113 Sum_probs=86.2
Q ss_pred HHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCC
Q 019692 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAY 207 (337)
Q Consensus 129 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~ 207 (337)
+...+.+.++.+|||+|||+|..+..+++..+ .+|+++|+++.+++.++++++..|+. ++.++.+|+.+++
T Consensus 56 ~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~--~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~------ 127 (287)
T 1kpg_A 56 ALGKLGLQPGMTLLDVGCGWGATMMRAVEKYD--VNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD------ 127 (287)
T ss_dssp HHTTTTCCTTCEEEEETCTTSHHHHHHHHHHC--CEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC------
T ss_pred HHHHcCCCCcCEEEEECCcccHHHHHHHHHcC--CEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC------
Confidence 34446678899999999999999999996652 59999999999999999999988874 6999999997664
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
++||+|++.- ++..-++ .....+|+.+.+++++ |.++.++...
T Consensus 128 ~~fD~v~~~~------~l~~~~~------------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~ 171 (287)
T 1kpg_A 128 EPVDRIVSIG------AFEHFGH------------------------ERYDAFFSLAHRLLPADGVMLLHTITG 171 (287)
T ss_dssp CCCSEEEEES------CGGGTCT------------------------TTHHHHHHHHHHHSCTTCEEEEEEEEE
T ss_pred CCeeEEEEeC------chhhcCh------------------------HHHHHHHHHHHHhcCCCCEEEEEEecC
Confidence 4699999642 2211000 0024678888887776 7887766543
No 163
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.02 E-value=4.9e-10 Score=103.78 Aligned_cols=113 Identities=13% Similarity=0.043 Sum_probs=80.3
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC-----CCcEEEEeccCCCCCCCCCCCCCc
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG-----AANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g-----~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
.++.+|||+|||+|+.+..+++. .+..+|+++|+|+.+++.+++++...+ -.+++++.+|+..+.... .++|
T Consensus 82 ~~~~~VLdiG~G~G~~~~~l~~~-~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~--~~~f 158 (294)
T 3adn_A 82 GHAKHVLIIGGGDGAMLREVTRH-KNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT--SQTF 158 (294)
T ss_dssp TTCCEEEEESCTTCHHHHHHHTC-TTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CC--CCCE
T ss_pred CCCCEEEEEeCChhHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhc--CCCc
Confidence 34679999999999999998875 345799999999999999999988752 346999999998765432 2679
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
|+|++|++... | +.. .-.+.+.++.+.+.|++ |.++..++|
T Consensus 159 DvIi~D~~~p~-~-----~~~----------------------~l~~~~f~~~~~~~LkpgG~lv~~~~s 200 (294)
T 3adn_A 159 DVIISDCTDPI-G-----PGE----------------------SLFTSAFYEGCKRCLNPGGIFVAQNGV 200 (294)
T ss_dssp EEEEECC--------------------------------------CCHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cEEEECCCCcc-C-----cch----------------------hccHHHHHHHHHHhcCCCCEEEEecCC
Confidence 99999988421 1 000 00124678888888887 777665554
No 164
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.02 E-value=3.7e-10 Score=102.56 Aligned_cols=91 Identities=21% Similarity=0.216 Sum_probs=72.9
Q ss_pred hhHHHHHHhCCCCC--CeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC--------C-CcEEEE
Q 019692 125 ASSMVAAALAPKPG--WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG--------A-ANIEVL 193 (337)
Q Consensus 125 ss~l~~~~l~~~~g--~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g--------~-~~v~~~ 193 (337)
....+..++.+++| .+|||+|||+|..++.+|.. .++|+++|+++.+++.+++++++.+ + .+|+++
T Consensus 74 ~~e~l~~al~l~~g~~~~VLDl~~G~G~dal~lA~~---g~~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~ 150 (258)
T 2oyr_A 74 RGEAVAKAVGIKGDYLPDVVDATAGLGRDAFVLASV---GCRVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLI 150 (258)
T ss_dssp GGSHHHHHTTCBTTBCCCEEETTCTTCHHHHHHHHH---TCCEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEE
T ss_pred hHHHHHHHhcccCCCCCEEEEcCCcCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEE
Confidence 34555667777778 99999999999999999997 3589999999999888888876542 3 469999
Q ss_pred eccCCCCCCCCCCCCCccEEEECCCCC
Q 019692 194 HGDFLNLDPKDPAYSEVRAILLDPSCS 220 (337)
Q Consensus 194 ~~D~~~~~~~~~~~~~fD~IlvDpPCS 220 (337)
++|+.++..... .+||+|++|||..
T Consensus 151 ~~D~~~~L~~~~--~~fDvV~lDP~y~ 175 (258)
T 2oyr_A 151 HASSLTALTDIT--PRPQVVYLDPMFP 175 (258)
T ss_dssp ESCHHHHSTTCS--SCCSEEEECCCCC
T ss_pred ECCHHHHHHhCc--ccCCEEEEcCCCC
Confidence 999887654332 3699999999953
No 165
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.02 E-value=6.2e-10 Score=104.55 Aligned_cols=82 Identities=17% Similarity=0.253 Sum_probs=68.5
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCcc
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD 211 (337)
+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++.+|+. +|+++.+|+.+++.. .++||
T Consensus 34 ~~~~~~~~VLDiGcGtG~ls~~la~~--g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~---~~~~D 107 (328)
T 1g6q_1 34 KDLFKDKIVLDVGCGTGILSMFAAKH--GAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLP---FPKVD 107 (328)
T ss_dssp HHHHTTCEEEEETCTTSHHHHHHHHT--CCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCS---SSCEE
T ss_pred HhhcCCCEEEEecCccHHHHHHHHHC--CCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCC---CCccc
Confidence 34457899999999999999988875 44699999999 6999999999999985 499999999887533 25799
Q ss_pred EEEECCCCC
Q 019692 212 AILLDPSCS 220 (337)
Q Consensus 212 ~IlvDpPCS 220 (337)
+|+++++..
T Consensus 108 ~Ivs~~~~~ 116 (328)
T 1g6q_1 108 IIISEWMGY 116 (328)
T ss_dssp EEEECCCBT
T ss_pred EEEEeCchh
Confidence 999998743
No 166
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.02 E-value=1.8e-09 Score=96.84 Aligned_cols=116 Identities=12% Similarity=0.093 Sum_probs=86.5
Q ss_pred echhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC
Q 019692 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201 (337)
Q Consensus 122 Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~ 201 (337)
|......+...+.+.++.+|||+|||+|..+..++... +..+|+++|+++.+++.++++ ..++.++.+|+.+++
T Consensus 18 ~~~~~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~~D~s~~~~~~a~~~-----~~~~~~~~~d~~~~~ 91 (259)
T 2p35_A 18 RTRPARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRY-GVNVITGIDSDDDMLEKAADR-----LPNTNFGKADLATWK 91 (259)
T ss_dssp GGHHHHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHH-CTTSEEEEESCHHHHHHHHHH-----STTSEEEECCTTTCC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhC-CCCEEEEEECCHHHHHHHHHh-----CCCcEEEECChhhcC
Confidence 33334444555667789999999999999999999886 357899999999999999887 357899999998876
Q ss_pred CCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 202 PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 202 ~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
. ..+||+|++... +..-+| ...+|.++.+++++ |.++.++..
T Consensus 92 -~---~~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~~~~~~ 134 (259)
T 2p35_A 92 -P---AQKADLLYANAV------FQWVPD--------------------------HLAVLSQLMDQLESGGVLAVQMPD 134 (259)
T ss_dssp -C---SSCEEEEEEESC------GGGSTT--------------------------HHHHHHHHGGGEEEEEEEEEEEEC
T ss_pred -c---cCCcCEEEEeCc------hhhCCC--------------------------HHHHHHHHHHhcCCCeEEEEEeCC
Confidence 2 257999997432 111001 24678888888887 777777643
No 167
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.02 E-value=7.9e-10 Score=99.37 Aligned_cols=113 Identities=12% Similarity=0.118 Sum_probs=85.3
Q ss_pred HHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCC
Q 019692 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209 (337)
Q Consensus 130 ~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~ 209 (337)
...+.+.++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... .+++++++|+.+++... ++
T Consensus 48 ~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~---~~ 120 (266)
T 3ujc_A 48 LSDIELNENSKVLDIGSGLGGGCMYINEKY--GAHTHGIDICSNIVNMANERVSGN--NKIIFEANDILTKEFPE---NN 120 (266)
T ss_dssp TTTCCCCTTCEEEEETCTTSHHHHHHHHHH--CCEEEEEESCHHHHHHHHHTCCSC--TTEEEEECCTTTCCCCT---TC
T ss_pred HHhcCCCCCCEEEEECCCCCHHHHHHHHHc--CCEEEEEeCCHHHHHHHHHHhhcC--CCeEEEECccccCCCCC---Cc
Confidence 344567789999999999999999999976 479999999999999999887654 67999999998875432 67
Q ss_pred ccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 210 fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
||+|++... +.. .++. ....+|+.+.+++++ |.++.++.+
T Consensus 121 fD~v~~~~~------l~~-----------------~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~ 161 (266)
T 3ujc_A 121 FDLIYSRDA------ILA-----------------LSLE-------NKNKLFQKCYKWLKPTGTLLITDYC 161 (266)
T ss_dssp EEEEEEESC------GGG-----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EEEEeHHHH------HHh-----------------cChH-------HHHHHHHHHHHHcCCCCEEEEEEec
Confidence 999997422 211 0111 125778888888887 777776543
No 168
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.02 E-value=6.2e-10 Score=102.21 Aligned_cols=82 Identities=16% Similarity=0.174 Sum_probs=57.4
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeC-CHHHHHHHHHHH-----HHhCCC-----cEEEEeccCCCCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL-NKERVRRLKDTI-----KLSGAA-----NIEVLHGDFLNLDPK 203 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~-~~~~l~~l~~~~-----~~~g~~-----~v~~~~~D~~~~~~~ 203 (337)
..+|.+|||+|||+|..+..++.. +.++|+++|+ ++.+++.+++|+ +.+|+. +|.+...|..+....
T Consensus 77 ~~~~~~vLDlG~G~G~~~~~~a~~--~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~ 154 (281)
T 3bzb_A 77 LIAGKTVCELGAGAGLVSIVAFLA--GADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDS 154 (281)
T ss_dssp GTTTCEEEETTCTTSHHHHHHHHT--TCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHH
T ss_pred hcCCCeEEEecccccHHHHHHHHc--CCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHH
Confidence 357889999999999999988875 3459999999 899999999999 666654 688886665442111
Q ss_pred CC---CCCCccEEEE-CCC
Q 019692 204 DP---AYSEVRAILL-DPS 218 (337)
Q Consensus 204 ~~---~~~~fD~Ilv-DpP 218 (337)
.. ...+||+|++ |+.
T Consensus 155 ~~~~~~~~~fD~Ii~~dvl 173 (281)
T 3bzb_A 155 LQRCTGLQRFQVVLLADLL 173 (281)
T ss_dssp HHHHHSCSSBSEEEEESCC
T ss_pred HHhhccCCCCCEEEEeCcc
Confidence 00 0257999987 554
No 169
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.02 E-value=1.9e-09 Score=110.89 Aligned_cols=117 Identities=12% Similarity=0.097 Sum_probs=88.1
Q ss_pred HHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh------CCCcEEEEeccCCCCCCC
Q 019692 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS------GAANIEVLHGDFLNLDPK 203 (337)
Q Consensus 130 ~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~------g~~~v~~~~~D~~~~~~~ 203 (337)
...+...++.+|||+|||+|..+..+++..++..+|+|+|+++.+++.++++++.. |..+|+++++|+.+++..
T Consensus 714 LelL~~~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~ 793 (950)
T 3htx_A 714 LKHIRESSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSR 793 (950)
T ss_dssp HHHHHHSCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTT
T ss_pred HHHhcccCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcc
Confidence 44455568999999999999999999886434469999999999999999987643 667899999999998764
Q ss_pred CCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCC
Q 019692 204 DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCS 279 (337)
Q Consensus 204 ~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS 279 (337)
. +.||+|++. +++..- .. .....+++.+.+++++|.++.+|..
T Consensus 794 d---~sFDlVV~~------eVLeHL-----------------~d-------p~l~~~L~eI~RvLKPG~LIISTPN 836 (950)
T 3htx_A 794 L---HDVDIGTCL------EVIEHM-----------------EE-------DQACEFGEKVLSLFHPKLLIVSTPN 836 (950)
T ss_dssp S---CSCCEEEEE------SCGGGS-----------------CH-------HHHHHHHHHHHHTTCCSEEEEEECB
T ss_pred c---CCeeEEEEe------CchhhC-----------------Ch-------HHHHHHHHHHHHHcCCCEEEEEecC
Confidence 3 679999972 233211 01 1124578888889999977776653
No 170
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.02 E-value=3.2e-09 Score=103.12 Aligned_cols=89 Identities=22% Similarity=0.189 Sum_probs=68.8
Q ss_pred HHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHH-------HHHHHHhC--CCcEEEEeccCCC
Q 019692 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRL-------KDTIKLSG--AANIEVLHGDFLN 199 (337)
Q Consensus 129 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l-------~~~~~~~g--~~~v~~~~~D~~~ 199 (337)
+...+.+.+|++|||+|||+|..+..+|... +..+|+|+|+++.+++.+ +++++..| ..+|+++++|...
T Consensus 234 ml~~l~l~~g~~VLDLGCGsG~la~~LA~~~-g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV~~i~gD~~~ 312 (433)
T 1u2z_A 234 VYQQCQLKKGDTFMDLGSGVGNCVVQAALEC-GCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKKSFV 312 (433)
T ss_dssp HHHHTTCCTTCEEEEESCTTSHHHHHHHHHH-CCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESSCST
T ss_pred HHHhcCCCCCCEEEEeCCCcCHHHHHHHHHC-CCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCceEEEEcCccc
Confidence 3455678899999999999999999999976 346899999999998888 99999999 5689999986442
Q ss_pred CCCCC-CCCCCccEEEECCC
Q 019692 200 LDPKD-PAYSEVRAILLDPS 218 (337)
Q Consensus 200 ~~~~~-~~~~~fD~IlvDpP 218 (337)
..... .....||+|+++..
T Consensus 313 ~~~~~~~~~~~FDvIvvn~~ 332 (433)
T 1u2z_A 313 DNNRVAELIPQCDVILVNNF 332 (433)
T ss_dssp TCHHHHHHGGGCSEEEECCT
T ss_pred cccccccccCCCCEEEEeCc
Confidence 11000 00257999998644
No 171
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.02 E-value=2.4e-09 Score=94.20 Aligned_cols=109 Identities=12% Similarity=0.153 Sum_probs=83.2
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-----cEEEEeccCCCCCCCCCCCCCc
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-----NIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-----~v~~~~~D~~~~~~~~~~~~~f 210 (337)
+++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..++. ++.++.+|+..++... ++|
T Consensus 29 ~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~---~~~ 102 (235)
T 3sm3_A 29 QEDDEILDIGCGSGKISLELASK---GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHD---SSF 102 (235)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCT---TCE
T ss_pred CCCCeEEEECCCCCHHHHHHHhC---CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCC---Cce
Confidence 57899999999999999999886 469999999999999999999887763 6899999998876432 679
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
|+|++... +..-+ +++. ...+|+.+.+++++ |.++.++..
T Consensus 103 D~v~~~~~------l~~~~----------------~~~~-------~~~~l~~~~~~L~pgG~l~~~~~~ 143 (235)
T 3sm3_A 103 DFAVMQAF------LTSVP----------------DPKE-------RSRIIKEVFRVLKPGAYLYLVEFG 143 (235)
T ss_dssp EEEEEESC------GGGCC----------------CHHH-------HHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred eEEEEcch------hhcCC----------------CHHH-------HHHHHHHHHHHcCCCeEEEEEECC
Confidence 99998533 21111 1111 23678888887776 777777653
No 172
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.01 E-value=1.2e-09 Score=94.81 Aligned_cols=130 Identities=10% Similarity=-0.013 Sum_probs=89.7
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+.++.+|||+|||+|..+..++.. + ..+|+++|+++.+++.+++++.. ..++.++.+|+.+++.. .++||+|+
T Consensus 40 ~~~~~~vLdiGcG~G~~~~~l~~~-~-~~~v~~~D~s~~~~~~a~~~~~~--~~~i~~~~~d~~~~~~~---~~~fD~v~ 112 (215)
T 2pxx_A 40 LRPEDRILVLGCGNSALSYELFLG-G-FPNVTSVDYSSVVVAAMQACYAH--VPQLRWETMDVRKLDFP---SASFDVVL 112 (215)
T ss_dssp CCTTCCEEEETCTTCSHHHHHHHT-T-CCCEEEEESCHHHHHHHHHHTTT--CTTCEEEECCTTSCCSC---SSCEEEEE
T ss_pred cCCCCeEEEECCCCcHHHHHHHHc-C-CCcEEEEeCCHHHHHHHHHhccc--CCCcEEEEcchhcCCCC---CCcccEEE
Confidence 367899999999999999999886 2 23899999999999999998764 35799999999887533 25799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHh
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVL 293 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l 293 (337)
++++....-. ...+. | . ...+ .......+|+.+.+++++ |.++.++.+. ......++
T Consensus 113 ~~~~~~~~~~--~~~~~-~---------~-~~~~----~~~~~~~~l~~~~~~LkpgG~li~~~~~~-----~~~~~~~~ 170 (215)
T 2pxx_A 113 EKGTLDALLA--GERDP-W---------T-VSSE----GVHTVDQVLSEVSRVLVPGGRFISMTSAA-----PHFRTRHY 170 (215)
T ss_dssp EESHHHHHTT--TCSCT-T---------S-CCHH----HHHHHHHHHHHHHHHEEEEEEEEEEESCC-----HHHHHHHH
T ss_pred ECcchhhhcc--ccccc-c---------c-cccc----hhHHHHHHHHHHHHhCcCCCEEEEEeCCC-----cHHHHHHH
Confidence 8776322110 01000 0 0 0111 223346778888888876 8888887763 34445555
No 173
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.01 E-value=1.5e-09 Score=100.08 Aligned_cols=82 Identities=13% Similarity=0.100 Sum_probs=68.2
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--CCCcEEEEeccCCCCCCCC---CCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GAANIEVLHGDFLNLDPKD---PAYSE 209 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g~~~v~~~~~D~~~~~~~~---~~~~~ 209 (337)
..++.+|||+|||+|..+..++..+.+..+|+|+|+++.+++.++++++.. +..+++++++|+.+++... ...++
T Consensus 34 ~~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~ 113 (299)
T 3g5t_A 34 DGERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK 113 (299)
T ss_dssp CSCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred cCCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence 357899999999999999999987656689999999999999999999987 3467999999998876332 00157
Q ss_pred ccEEEEC
Q 019692 210 VRAILLD 216 (337)
Q Consensus 210 fD~IlvD 216 (337)
||+|++.
T Consensus 114 fD~V~~~ 120 (299)
T 3g5t_A 114 IDMITAV 120 (299)
T ss_dssp EEEEEEE
T ss_pred eeEEeHh
Confidence 9999974
No 174
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.01 E-value=6.2e-10 Score=106.54 Aligned_cols=79 Identities=20% Similarity=0.251 Sum_probs=68.6
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCcc
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD 211 (337)
+...++.+|||+|||+|..+..+++. +..+|+|+|++ .+++.++++++.+|+.+ |+++++|+.++... ++||
T Consensus 59 ~~~~~~~~VLDlGcGtG~ls~~la~~--g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~~D 131 (376)
T 3r0q_C 59 KHHFEGKTVLDVGTGSGILAIWSAQA--GARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLP----EKVD 131 (376)
T ss_dssp TTTTTTCEEEEESCTTTHHHHHHHHT--TCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCS----SCEE
T ss_pred cccCCCCEEEEeccCcCHHHHHHHhc--CCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcC----Ccce
Confidence 45578999999999999999999886 34599999999 99999999999999865 99999999887643 5799
Q ss_pred EEEECCC
Q 019692 212 AILLDPS 218 (337)
Q Consensus 212 ~IlvDpP 218 (337)
+|++++.
T Consensus 132 ~Iv~~~~ 138 (376)
T 3r0q_C 132 VIISEWM 138 (376)
T ss_dssp EEEECCC
T ss_pred EEEEcCh
Confidence 9999874
No 175
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.99 E-value=2.5e-10 Score=106.31 Aligned_cols=104 Identities=15% Similarity=0.153 Sum_probs=72.0
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeC----CHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACEL----NKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSE 209 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~----~~~~l~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~ 209 (337)
+++|.+|||+|||||++|..+++. ++|+|+|+ ++.+++.+ ..+..|.++|+++.+ |+..++. .+
T Consensus 80 ~~~g~~VLDlGcG~G~~s~~la~~----~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~~-----~~ 148 (305)
T 2p41_A 80 VTPEGKVVDLGCGRGGWSYYCGGL----KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIPP-----ER 148 (305)
T ss_dssp SCCCEEEEEETCTTSHHHHHHHTS----TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSCC-----CC
T ss_pred CCCCCEEEEEcCCCCHHHHHHHhc----CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCCc-----CC
Confidence 467899999999999999998875 57999999 55443211 112233457999999 8887642 47
Q ss_pred ccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEE
Q 019692 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVY 275 (337)
Q Consensus 210 fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvY 275 (337)
||+|++|.+|+ +|.. ..+... +..+|..+.+++++ |.++.
T Consensus 149 fD~V~sd~~~~-~g~~--------------------~~d~~~-----~l~~L~~~~~~LkpGG~~v~ 189 (305)
T 2p41_A 149 CDTLLCDIGES-SPNP--------------------TVEAGR-----TLRVLNLVENWLSNNTQFCV 189 (305)
T ss_dssp CSEEEECCCCC-CSSH--------------------HHHHHH-----HHHHHHHHHHHCCTTCEEEE
T ss_pred CCEEEECCccc-cCcc--------------------hhhHHH-----HHHHHHHHHHHhCCCCEEEE
Confidence 99999999987 5531 111111 11477778787877 76664
No 176
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.99 E-value=1.3e-09 Score=99.65 Aligned_cols=105 Identities=18% Similarity=0.262 Sum_probs=81.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++++..|+ .+++++.+|+.+++... .++||+|++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~v~~ 142 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAER---GHQVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHL--ETPVDLILF 142 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGC--SSCEEEEEE
T ss_pred CCCEEEEeCCcchHHHHHHHHC---CCEEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhc--CCCceEEEE
Confidence 3789999999999999999886 46999999999999999999999988 57999999998876322 267999997
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
... +..-+| ...+|+.+.+++++ |.++.++.
T Consensus 143 ~~~------l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~~~~ 174 (285)
T 4htf_A 143 HAV------LEWVAD--------------------------PRSVLQTLWSVLRPGGVLSLMFY 174 (285)
T ss_dssp ESC------GGGCSC--------------------------HHHHHHHHHHTEEEEEEEEEEEE
T ss_pred Cch------hhcccC--------------------------HHHHHHHHHHHcCCCeEEEEEEe
Confidence 532 211111 14678888888887 77776654
No 177
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.99 E-value=2.6e-09 Score=91.01 Aligned_cols=133 Identities=17% Similarity=0.120 Sum_probs=92.9
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++ .++.++++|+.+.+.. .++||+|+
T Consensus 44 ~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~~~~~~~~a~~~~-----~~~~~~~~d~~~~~~~---~~~~D~i~ 112 (195)
T 3cgg_A 44 APRGAKILDAGCGQGRIGGYLSKQ---GHDVLGTDLDPILIDYAKQDF-----PEARWVVGDLSVDQIS---ETDFDLIV 112 (195)
T ss_dssp SCTTCEEEEETCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTTSCCC---CCCEEEEE
T ss_pred ccCCCeEEEECCCCCHHHHHHHHC---CCcEEEEcCCHHHHHHHHHhC-----CCCcEEEcccccCCCC---CCceeEEE
Confidence 467899999999999999999886 369999999999999998875 3588999999876533 25799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHh
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVL 293 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l 293 (337)
+++++-.. + +.+. ...+|..+.+++++ |.++.++.+. ..-....+...+
T Consensus 113 ~~~~~~~~--~--------------------~~~~-------~~~~l~~~~~~l~~~G~l~~~~~~~-~~~~~~~~~~~l 162 (195)
T 3cgg_A 113 SAGNVMGF--L--------------------AEDG-------REPALANIHRALGADGRAVIGFGAG-RGWVFGDFLEVA 162 (195)
T ss_dssp ECCCCGGG--S--------------------CHHH-------HHHHHHHHHHHEEEEEEEEEEEETT-SSCCHHHHHHHH
T ss_pred ECCcHHhh--c--------------------ChHH-------HHHHHHHHHHHhCCCCEEEEEeCCC-CCcCHHHHHHHH
Confidence 98653210 0 1111 25678888887777 6666655443 223445555555
Q ss_pred chhcCCCcEEecCCCCCC
Q 019692 294 PIAMSFGFQLATPFPNGT 311 (337)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~ 311 (337)
+ ..||++......|.
T Consensus 163 ~---~~Gf~~~~~~~~~~ 177 (195)
T 3cgg_A 163 E---RVGLELENAFESWD 177 (195)
T ss_dssp H---HHTEEEEEEESSTT
T ss_pred H---HcCCEEeeeecccc
Confidence 3 34788765444444
No 178
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.98 E-value=3e-09 Score=97.29 Aligned_cols=113 Identities=13% Similarity=0.030 Sum_probs=85.5
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
+.++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++...+. .++.++++|+.+.+... .++||+|
T Consensus 62 ~~~~~~vLDiGcG~G~~~~~l~~~--~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~fD~v 137 (298)
T 1ri5_A 62 TKRGDSVLDLGCGKGGDLLKYERA--GIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDL--GKEFDVI 137 (298)
T ss_dssp CCTTCEEEEETCTTTTTHHHHHHH--TCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCC--SSCEEEE
T ss_pred CCCCCeEEEECCCCCHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCC--CCCcCEE
Confidence 467899999999999999988875 346999999999999999999998877 46999999998875421 2579999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
++.-. +..- + .+. .....+|+.+.+++++ |.++.+++.
T Consensus 138 ~~~~~------l~~~----~-----------~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~~ 176 (298)
T 1ri5_A 138 SSQFS------FHYA----F-----------STS-------ESLDIAQRNIARHLRPGGYFIMTVPS 176 (298)
T ss_dssp EEESC------GGGG----G-----------SSH-------HHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred EECch------hhhh----c-----------CCH-------HHHHHHHHHHHHhcCCCCEEEEEECC
Confidence 97632 1100 0 011 1235688888888887 788887755
No 179
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.98 E-value=3.7e-09 Score=92.05 Aligned_cols=112 Identities=17% Similarity=0.108 Sum_probs=84.0
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 207 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 207 (337)
+...+....++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++ .+..++.++++|+.++. . .
T Consensus 37 ~~~~l~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~-~---~ 105 (218)
T 3ou2_A 37 ALERLRAGNIRGDVLELASGTGYWTRHLSGL---ADRVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWT-P---D 105 (218)
T ss_dssp HHHHHTTTTSCSEEEEESCTTSHHHHHHHHH---SSEEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCC-C---S
T ss_pred HHHHHhcCCCCCeEEEECCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCC-C---C
Confidence 3333334678889999999999999999987 3699999999999999988 67778999999998872 2 2
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
++||+|++.- ++..- .. .....+|+.+.+++++ |.++.++.+.
T Consensus 106 ~~~D~v~~~~------~l~~~-----------------~~-------~~~~~~l~~~~~~L~pgG~l~~~~~~~ 149 (218)
T 3ou2_A 106 RQWDAVFFAH------WLAHV-----------------PD-------DRFEAFWESVRSAVAPGGVVEFVDVTD 149 (218)
T ss_dssp SCEEEEEEES------CGGGS-----------------CH-------HHHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred CceeEEEEec------hhhcC-----------------CH-------HHHHHHHHHHHHHcCCCeEEEEEeCCC
Confidence 6899999742 22110 11 1135678888888776 8888887654
No 180
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.98 E-value=1.7e-09 Score=97.81 Aligned_cols=77 Identities=14% Similarity=0.183 Sum_probs=61.9
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH-----------------hCCCcEEEEecc
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL-----------------SGAANIEVLHGD 196 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~-----------------~g~~~v~~~~~D 196 (337)
.+.++.+|||+|||+|..+..||+. +..|+|+|+|+.+++.++++... ....+|+++++|
T Consensus 65 ~~~~~~~vLD~GCG~G~~~~~La~~---G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D 141 (252)
T 2gb4_A 65 KGQSGLRVFFPLCGKAIEMKWFADR---GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCS 141 (252)
T ss_dssp TTCCSCEEEETTCTTCTHHHHHHHT---TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESC
T ss_pred cCCCCCeEEEeCCCCcHHHHHHHHC---CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECc
Confidence 4467899999999999999999986 35899999999999999776531 012469999999
Q ss_pred CCCCCCCCCCCCCccEEEE
Q 019692 197 FLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 197 ~~~~~~~~~~~~~fD~Ilv 215 (337)
+.+++... .++||+|+.
T Consensus 142 ~~~l~~~~--~~~FD~V~~ 158 (252)
T 2gb4_A 142 IFDLPRAN--IGKFDRIWD 158 (252)
T ss_dssp TTTGGGGC--CCCEEEEEE
T ss_pred cccCCccc--CCCEEEEEE
Confidence 99887542 257999995
No 181
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=98.97 E-value=1.4e-09 Score=98.74 Aligned_cols=89 Identities=16% Similarity=0.204 Sum_probs=72.8
Q ss_pred hhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC
Q 019692 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204 (337)
Q Consensus 125 ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~ 204 (337)
-...++..+++.++++|||+|||+|..|..+++. .++|+|+|+|+.+++.+++++.. ..+++++++|+.+++...
T Consensus 17 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~---~~~V~avEid~~~~~~~~~~~~~--~~~v~~i~~D~~~~~~~~ 91 (255)
T 3tqs_A 17 VLQKIVSAIHPQKTDTLVEIGPGRGALTDYLLTE---CDNLALVEIDRDLVAFLQKKYNQ--QKNITIYQNDALQFDFSS 91 (255)
T ss_dssp HHHHHHHHHCCCTTCEEEEECCTTTTTHHHHTTT---SSEEEEEECCHHHHHHHHHHHTT--CTTEEEEESCTTTCCGGG
T ss_pred HHHHHHHhcCCCCcCEEEEEcccccHHHHHHHHh---CCEEEEEECCHHHHHHHHHHHhh--CCCcEEEEcchHhCCHHH
Confidence 4455667788899999999999999999999876 37999999999999999999865 467999999999886432
Q ss_pred C-CCCCccEEEECCCC
Q 019692 205 P-AYSEVRAILLDPSC 219 (337)
Q Consensus 205 ~-~~~~fD~IlvDpPC 219 (337)
. ...+|| |+.++|.
T Consensus 92 ~~~~~~~~-vv~NlPY 106 (255)
T 3tqs_A 92 VKTDKPLR-VVGNLPY 106 (255)
T ss_dssp SCCSSCEE-EEEECCH
T ss_pred hccCCCeE-EEecCCc
Confidence 1 013577 9999994
No 182
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.95 E-value=2.3e-09 Score=96.02 Aligned_cols=109 Identities=11% Similarity=0.048 Sum_probs=81.5
Q ss_pred HHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCC
Q 019692 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSE 209 (337)
Q Consensus 130 ~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~ 209 (337)
...+...++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++++. ..++.++.+|+.+++... ++
T Consensus 37 ~~~~~~~~~~~vLD~GcG~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~---~~~~~~~~~d~~~~~~~~---~~ 108 (253)
T 3g5l_A 37 KKMLPDFNQKTVLDLGCGFGWHCIYAAEH--GAKKVLGIDLSERMLTEAKRKTT---SPVVCYEQKAIEDIAIEP---DA 108 (253)
T ss_dssp HTTCCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHHCC---CTTEEEEECCGGGCCCCT---TC
T ss_pred HHhhhccCCCEEEEECCCCCHHHHHHHHc--CCCEEEEEECCHHHHHHHHHhhc---cCCeEEEEcchhhCCCCC---CC
Confidence 34455567899999999999999999886 23499999999999999998865 457999999998876432 67
Q ss_pred ccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 210 fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
||+|++.-. +..-++ ...+|+.+.+++++ |.++.++.
T Consensus 109 fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~LkpgG~l~~~~~ 146 (253)
T 3g5l_A 109 YNVVLSSLA------LHYIAS--------------------------FDDICKKVYINLKSSGSFIFSVE 146 (253)
T ss_dssp EEEEEEESC------GGGCSC--------------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred eEEEEEchh------hhhhhh--------------------------HHHHHHHHHHHcCCCcEEEEEeC
Confidence 999997432 211001 24678888888887 77777643
No 183
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=98.95 E-value=5.1e-10 Score=102.92 Aligned_cols=111 Identities=16% Similarity=0.157 Sum_probs=81.7
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--C---------CCcEEEEeccCCCCCCCC
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G---------AANIEVLHGDFLNLDPKD 204 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g---------~~~v~~~~~D~~~~~~~~ 204 (337)
..+.+|||+|||+|+.+..+++. +..+|+++|+|+.+++.+++++ .. + -.+++++.+|+.+....
T Consensus 74 ~~~~~VLdiG~G~G~~~~~l~~~--~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~- 149 (281)
T 1mjf_A 74 PKPKRVLVIGGGDGGTVREVLQH--DVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN- 149 (281)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTS--CCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-
T ss_pred CCCCeEEEEcCCcCHHHHHHHhC--CCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcc-
Confidence 45789999999999999998886 4579999999999999999998 44 3 24699999998664322
Q ss_pred CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 205 ~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
.++||+|++|+|+.. |. +.. + .+.++++.+.+.+++ |.++..+++.
T Consensus 150 --~~~fD~Ii~d~~~~~-~~----~~~---------------------l--~~~~~l~~~~~~L~pgG~lv~~~~~~ 196 (281)
T 1mjf_A 150 --NRGFDVIIADSTDPV-GP----AKV---------------------L--FSEEFYRYVYDALNNPGIYVTQAGSV 196 (281)
T ss_dssp --CCCEEEEEEECCCCC-------------------------------T--TSHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred --cCCeeEEEECCCCCC-Cc----chh---------------------h--hHHHHHHHHHHhcCCCcEEEEEcCCc
Confidence 157999999999531 11 000 0 124667777777776 7887776654
No 184
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.94 E-value=2e-09 Score=94.25 Aligned_cols=107 Identities=17% Similarity=0.204 Sum_probs=80.2
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
+.+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++. .+++++++|+.+++.. ++||+
T Consensus 41 ~~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~~d~~~~~~~----~~fD~ 109 (220)
T 3hnr_A 41 VVNKSFGNVLEFGVGTGNLTNKLLLA---GRTVYGIEPSREMRMIAKEKLP----KEFSITEGDFLSFEVP----TSIDT 109 (220)
T ss_dssp HHHTCCSEEEEECCTTSHHHHHHHHT---TCEEEEECSCHHHHHHHHHHSC----TTCCEESCCSSSCCCC----SCCSE
T ss_pred hhccCCCeEEEeCCCCCHHHHHHHhC---CCeEEEEeCCHHHHHHHHHhCC----CceEEEeCChhhcCCC----CCeEE
Confidence 34457899999999999999999886 4699999999999999998865 4688999999887643 57999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
|++... +..-+ .++ +..+|+.+.+.+++ |.++.++...
T Consensus 110 v~~~~~------l~~~~----------------~~~--------~~~~l~~~~~~LkpgG~l~i~~~~~ 148 (220)
T 3hnr_A 110 IVSTYA------FHHLT----------------DDE--------KNVAIAKYSQLLNKGGKIVFADTIF 148 (220)
T ss_dssp EEEESC------GGGSC----------------HHH--------HHHHHHHHHHHSCTTCEEEEEEECB
T ss_pred EEECcc------hhcCC----------------hHH--------HHHHHHHHHHhcCCCCEEEEEeccc
Confidence 997532 21100 011 14578888887776 7887776443
No 185
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.94 E-value=3.2e-09 Score=92.02 Aligned_cols=111 Identities=11% Similarity=0.055 Sum_probs=81.3
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
...++.+|||+|||+|..+..++.. ...+|+++|+++.+++.++++++..+ .++.++++|+.+++... ++||+|
T Consensus 20 ~~~~~~~vLDiGcG~G~~~~~~~~~--~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~~---~~fD~v 93 (209)
T 2p8j_A 20 ESNLDKTVLDCGAGGDLPPLSIFVE--DGYKTYGIEISDLQLKKAENFSRENN-FKLNISKGDIRKLPFKD---ESMSFV 93 (209)
T ss_dssp HSSSCSEEEEESCCSSSCTHHHHHH--TTCEEEEEECCHHHHHHHHHHHHHHT-CCCCEEECCTTSCCSCT---TCEEEE
T ss_pred ccCCCCEEEEECCCCCHHHHHHHHh--CCCEEEEEECCHHHHHHHHHHHHhcC-CceEEEECchhhCCCCC---CceeEE
Confidence 3467899999999999875554443 24699999999999999999998877 46889999998875332 579999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
++... +.. .+.+ ....+++.+.+.+++ |.++.++.+.
T Consensus 94 ~~~~~------l~~-----------------~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~ 131 (209)
T 2p8j_A 94 YSYGT------IFH-----------------MRKN-------DVKEAIDEIKRVLKPGGLACINFLTT 131 (209)
T ss_dssp EECSC------GGG-----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEEET
T ss_pred EEcCh------HHh-----------------CCHH-------HHHHHHHHHHHHcCCCcEEEEEEecc
Confidence 97422 110 0111 135677888887776 8888887764
No 186
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.94 E-value=2.3e-09 Score=95.09 Aligned_cols=128 Identities=13% Similarity=0.137 Sum_probs=90.5
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
+.+|||+|||+|..+..++. ...+|+++|+++.+++.+++++...+. .+++++.+|+.++++. .+||+|++.
T Consensus 67 ~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~----~~fD~v~~~ 139 (235)
T 3lcc_A 67 LGRALVPGCGGGHDVVAMAS---PERFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPT----ELFDLIFDY 139 (235)
T ss_dssp CEEEEEETCTTCHHHHHHCB---TTEEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCS----SCEEEEEEE
T ss_pred CCCEEEeCCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCC----CCeeEEEEC
Confidence 45999999999999988865 357899999999999999999887543 5699999999987633 479999974
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcc-------cCHHH
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQV-------ENEDV 288 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~-------ENe~v 288 (337)
.. +..- .++ ....+|+.+.+++++ |.++..+.+.... -..+.
T Consensus 140 ~~------l~~~-----------------~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 189 (235)
T 3lcc_A 140 VF------FCAI-----------------EPE-------MRPAWAKSMYELLKPDGELITLMYPITDHVGGPPYKVDVST 189 (235)
T ss_dssp SS------TTTS-----------------CGG-------GHHHHHHHHHHHEEEEEEEEEEECCCSCCCSCSSCCCCHHH
T ss_pred hh------hhcC-----------------CHH-------HHHHHHHHHHHHCCCCcEEEEEEecccccCCCCCccCCHHH
Confidence 32 1110 000 124678888887777 7777665544322 24566
Q ss_pred HHHHhchhcCCCcEEec
Q 019692 289 IKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 289 v~~~l~~~~~~~~~~~~ 305 (337)
+...++ ..||+.+.
T Consensus 190 ~~~~l~---~~Gf~~~~ 203 (235)
T 3lcc_A 190 FEEVLV---PIGFKAVS 203 (235)
T ss_dssp HHHHHG---GGTEEEEE
T ss_pred HHHHHH---HcCCeEEE
Confidence 777774 45787753
No 187
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=98.94 E-value=3.2e-09 Score=95.25 Aligned_cols=76 Identities=13% Similarity=0.163 Sum_probs=64.2
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
.+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++ ..+..++.++.+|+.+++..+ ++||+|
T Consensus 36 ~~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~-~~~~~~~~~~~~d~~~~~~~~---~~fD~v 108 (263)
T 2yqz_A 36 PKGEEPVFLELGVGTGRIALPLIAR---GYRYIALDADAAMLEVFRQKI-AGVDRKVQVVQADARAIPLPD---ESVHGV 108 (263)
T ss_dssp CSSSCCEEEEETCTTSTTHHHHHTT---TCEEEEEESCHHHHHHHHHHT-TTSCTTEEEEESCTTSCCSCT---TCEEEE
T ss_pred CCCCCCEEEEeCCcCCHHHHHHHHC---CCEEEEEECCHHHHHHHHHHh-hccCCceEEEEcccccCCCCC---CCeeEE
Confidence 5678899999999999999988875 479999999999999999988 444567999999998876332 579999
Q ss_pred EEC
Q 019692 214 LLD 216 (337)
Q Consensus 214 lvD 216 (337)
++.
T Consensus 109 ~~~ 111 (263)
T 2yqz_A 109 IVV 111 (263)
T ss_dssp EEE
T ss_pred EEC
Confidence 974
No 188
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=98.93 E-value=1.3e-09 Score=104.18 Aligned_cols=76 Identities=21% Similarity=0.326 Sum_probs=64.0
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
.+|.+|||+|||+|..++.+|+. +..+|+|||.++ +++.++++++.+|+.+ |+++++|++++... ++||+|+
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~a--GA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lp----e~~Dviv 154 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQA--GARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELP----EQVDAIV 154 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHT--TCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SCEEEEE
T ss_pred cCCCEEEEeCCCccHHHHHHHHh--CCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCC----ccccEEE
Confidence 36899999999999988766664 456999999996 8899999999999865 99999999887533 5799999
Q ss_pred ECCC
Q 019692 215 LDPS 218 (337)
Q Consensus 215 vDpP 218 (337)
.+.-
T Consensus 155 sE~~ 158 (376)
T 4hc4_A 155 SEWM 158 (376)
T ss_dssp CCCC
T ss_pred eecc
Confidence 8753
No 189
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=98.93 E-value=1.8e-09 Score=98.23 Aligned_cols=83 Identities=10% Similarity=0.026 Sum_probs=60.6
Q ss_pred HHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC--CC
Q 019692 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP--KD 204 (337)
Q Consensus 127 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~--~~ 204 (337)
..+...+.+.+|.+|||+|||+|..+..+++. ..+|+|+|+|+.|++.++++++.. ++..++.++.. ..
T Consensus 35 ~~il~~l~l~~g~~VLDlGcGtG~~a~~La~~---g~~V~gvD~S~~ml~~Ar~~~~~~------~v~~~~~~~~~~~~~ 105 (261)
T 3iv6_A 35 ENDIFLENIVPGSTVAVIGASTRFLIEKALER---GASVTVFDFSQRMCDDLAEALADR------CVTIDLLDITAEIPK 105 (261)
T ss_dssp HHHHHTTTCCTTCEEEEECTTCHHHHHHHHHT---TCEEEEEESCHHHHHHHHHHTSSS------CCEEEECCTTSCCCG
T ss_pred HHHHHhcCCCCcCEEEEEeCcchHHHHHHHhc---CCEEEEEECCHHHHHHHHHHHHhc------cceeeeeeccccccc
Confidence 34455677889999999999999999999885 369999999999999999987654 12233333322 00
Q ss_pred CCCCCccEEEECCC
Q 019692 205 PAYSEVRAILLDPS 218 (337)
Q Consensus 205 ~~~~~fD~IlvDpP 218 (337)
...++||+|+++..
T Consensus 106 ~~~~~fD~Vv~~~~ 119 (261)
T 3iv6_A 106 ELAGHFDFVLNDRL 119 (261)
T ss_dssp GGTTCCSEEEEESC
T ss_pred ccCCCccEEEEhhh
Confidence 00257999998754
No 190
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.93 E-value=1.5e-09 Score=96.76 Aligned_cols=130 Identities=13% Similarity=0.118 Sum_probs=92.0
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
++.+|||+|||+|..+..++... ...|+++|+++.+++.+++++...+..++.++.+|+..++... ++||+|+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~---~~fD~v~~~ 153 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPL--FREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEP---DSYDVIWIQ 153 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTT--CSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCS---SCEEEEEEE
T ss_pred CCCEEEEECCCCCHHHHHHHHhc--CCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCC---CCEEEEEEc
Confidence 68899999999999998887753 4699999999999999999988776557999999988776432 579999976
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCc-----------cc
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQ-----------VE 284 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~-----------~E 284 (337)
-. +..- ... ....+|+.+.+++++ |.++.++..... .-
T Consensus 154 ~~------l~~~-----------------~~~-------~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~~~~~~~~~~ 203 (241)
T 2ex4_A 154 WV------IGHL-----------------TDQ-------HLAEFLRRCKGSLRPNGIIVIKDNMAQEGVILDDVDSSVCR 203 (241)
T ss_dssp SC------GGGS-----------------CHH-------HHHHHHHHHHHHEEEEEEEEEEEEEBSSSEEEETTTTEEEE
T ss_pred ch------hhhC-----------------CHH-------HHHHHHHHHHHhcCCCeEEEEEEccCCCcceecccCCcccC
Confidence 32 2110 111 124678888887887 777776532211 11
Q ss_pred CHHHHHHHhchhcCCCcEEe
Q 019692 285 NEDVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 285 Ne~vv~~~l~~~~~~~~~~~ 304 (337)
+.+.+..+++ ..||+++
T Consensus 204 ~~~~~~~~l~---~aGf~~~ 220 (241)
T 2ex4_A 204 DLDVVRRIIC---SAGLSLL 220 (241)
T ss_dssp BHHHHHHHHH---HTTCCEE
T ss_pred CHHHHHHHHH---HcCCeEE
Confidence 4566666664 3466664
No 191
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.92 E-value=7.2e-09 Score=92.66 Aligned_cols=75 Identities=29% Similarity=0.364 Sum_probs=64.2
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
...++.+|||+|||+|..+..+++. ..+|+++|+|+.+++.++++++..+. ++.++++|+.+++.. .+||+|
T Consensus 38 ~~~~~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~-~v~~~~~d~~~~~~~----~~fD~v 109 (252)
T 1wzn_A 38 AKREVRRVLDLACGTGIPTLELAER---GYEVVGLDLHEEMLRVARRKAKERNL-KIEFLQGDVLEIAFK----NEFDAV 109 (252)
T ss_dssp CSSCCCEEEEETCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTC-CCEEEESCGGGCCCC----SCEEEE
T ss_pred cccCCCEEEEeCCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHHHHhcCC-ceEEEECChhhcccC----CCccEE
Confidence 3457889999999999999999885 36899999999999999999998876 589999999886532 479999
Q ss_pred EEC
Q 019692 214 LLD 216 (337)
Q Consensus 214 lvD 216 (337)
++.
T Consensus 110 ~~~ 112 (252)
T 1wzn_A 110 TMF 112 (252)
T ss_dssp EEC
T ss_pred EEc
Confidence 963
No 192
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.92 E-value=4.6e-09 Score=96.81 Aligned_cols=49 Identities=18% Similarity=0.281 Sum_probs=41.5
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g 186 (337)
++.+|||+|||+|..+..++...+ ..+|+|+|+++.+++.++++++..+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~-~~~v~gvDis~~~i~~A~~~~~~~~ 94 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWG-PSRMVGLDIDSRLIHSARQNIRHYL 94 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTC-CSEEEEEESCHHHHHHHHHTC----
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcC-CCEEEEECCCHHHHHHHHHHHHhhh
Confidence 688999999999999999999864 4699999999999999999987654
No 193
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=98.92 E-value=3.1e-09 Score=104.92 Aligned_cols=79 Identities=22% Similarity=0.214 Sum_probs=67.1
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCcc
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD 211 (337)
+...++.+|||+|||+|..+..+++. +..+|+|+|+++ +++.++++++.+|+ ++|+++.+|+.+++.. ++||
T Consensus 154 l~~~~~~~VLDiGcGtG~la~~la~~--~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~----~~fD 226 (480)
T 3b3j_A 154 HTDFKDKIVLDVGCGSGILSFFAAQA--GARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLP----EQVD 226 (480)
T ss_dssp GGGTTTCEEEEESCSTTHHHHHHHHT--TCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCS----SCEE
T ss_pred hhhcCCCEEEEecCcccHHHHHHHHc--CCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccC----CCeE
Confidence 34457899999999999999988873 456999999998 99999999999998 5799999999886422 4799
Q ss_pred EEEECCC
Q 019692 212 AILLDPS 218 (337)
Q Consensus 212 ~IlvDpP 218 (337)
+|+++++
T Consensus 227 ~Ivs~~~ 233 (480)
T 3b3j_A 227 IIISEPM 233 (480)
T ss_dssp EEECCCC
T ss_pred EEEEeCc
Confidence 9998876
No 194
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.92 E-value=3.1e-09 Score=97.90 Aligned_cols=116 Identities=13% Similarity=0.170 Sum_probs=85.8
Q ss_pred HHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeccCCCCCCCCC
Q 019692 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA---ANIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 129 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~---~~v~~~~~D~~~~~~~~~ 205 (337)
....+... +.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...+. .+|+++++|+.+++..
T Consensus 75 ~~~~~~~~-~~~vLDlGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~-- 148 (299)
T 3g2m_A 75 FATRTGPV-SGPVLELAAGMGRLTFPFLDL---GWEVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALD-- 148 (299)
T ss_dssp HHHHHCCC-CSCEEEETCTTTTTHHHHHTT---TCCEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCS--
T ss_pred HHHhhCCC-CCcEEEEeccCCHHHHHHHHc---CCeEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcC--
Confidence 33444444 449999999999999999886 36899999999999999999998775 5799999999987642
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
++||.|++.. +++. . .+++ .+..+|+.+.+++++ |.++.++....
T Consensus 149 --~~fD~v~~~~-----~~~~-~----------------~~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~~ 194 (299)
T 3g2m_A 149 --KRFGTVVISS-----GSIN-E----------------LDEA-------DRRGLYASVREHLEPGGKFLLSLAMSE 194 (299)
T ss_dssp --CCEEEEEECH-----HHHT-T----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEECCH
T ss_pred --CCcCEEEECC-----cccc-c----------------CCHH-------HHHHHHHHHHHHcCCCcEEEEEeecCc
Confidence 6799998521 1111 0 0121 235778888888887 88888776654
No 195
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.92 E-value=4.8e-09 Score=90.71 Aligned_cols=124 Identities=21% Similarity=0.096 Sum_probs=89.0
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDp 217 (337)
+.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ ..++.++++|+.+++... ++||+|++..
T Consensus 42 ~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~---~~fD~v~~~~ 110 (203)
T 3h2b_A 42 DGVILDVGSGTGRWTGHLASL---GHQIEGLEPATRLVELARQT-----HPSVTFHHGTITDLSDSP---KRWAGLLAWY 110 (203)
T ss_dssp CSCEEEETCTTCHHHHHHHHT---TCCEEEECCCHHHHHHHHHH-----CTTSEEECCCGGGGGGSC---CCEEEEEEES
T ss_pred CCeEEEecCCCCHHHHHHHhc---CCeEEEEeCCHHHHHHHHHh-----CCCCeEEeCcccccccCC---CCeEEEEehh
Confidence 889999999999999999886 35899999999999999887 346899999998876332 6799999753
Q ss_pred CCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCc------------cc
Q 019692 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQ------------VE 284 (337)
Q Consensus 218 PCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~------------~E 284 (337)
. +..-+ .+ ....+|+.+.+++++ |.++.++..... .-
T Consensus 111 ~------l~~~~-----------------~~-------~~~~~l~~~~~~L~pgG~l~i~~~~~~~~~~~~~~~~~~~~~ 160 (203)
T 3h2b_A 111 S------LIHMG-----------------PG-------ELPDALVALRMAVEDGGGLLMSFFSGPSLEPMYHPVATAYRW 160 (203)
T ss_dssp S------STTCC-----------------TT-------THHHHHHHHHHTEEEEEEEEEEEECCSSCEEECCSSSCEEEC
T ss_pred h------HhcCC-----------------HH-------HHHHHHHHHHHHcCCCcEEEEEEccCCchhhhhchhhhhccC
Confidence 2 21100 00 025778888888887 777776654332 12
Q ss_pred CHHHHHHHhchhcCCCcEEec
Q 019692 285 NEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 285 Ne~vv~~~l~~~~~~~~~~~~ 305 (337)
..+.+...|+ ..||+++.
T Consensus 161 ~~~~~~~~l~---~~Gf~~~~ 178 (203)
T 3h2b_A 161 PLPELAQALE---TAGFQVTS 178 (203)
T ss_dssp CHHHHHHHHH---HTTEEEEE
T ss_pred CHHHHHHHHH---HCCCcEEE
Confidence 3556666664 45788754
No 196
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.91 E-value=4.6e-09 Score=91.49 Aligned_cols=125 Identities=14% Similarity=0.032 Sum_probs=89.4
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
.+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++ ++.++.+|+..++ . .++||+|
T Consensus 40 ~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~------~~~~~~~d~~~~~-~---~~~fD~v 106 (211)
T 3e23_A 40 ELPAGAKILELGCGAGYQAEAMLAA---GFDVDATDGSPELAAEASRRL------GRPVRTMLFHQLD-A---IDAYDAV 106 (211)
T ss_dssp TSCTTCEEEESSCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHH------TSCCEECCGGGCC-C---CSCEEEE
T ss_pred hcCCCCcEEEECCCCCHHHHHHHHc---CCeEEEECCCHHHHHHHHHhc------CCceEEeeeccCC-C---CCcEEEE
Confidence 4567899999999999999999886 469999999999999999887 3567888988876 2 2689999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcc---------
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQV--------- 283 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~--------- 283 (337)
++... +.. ...+ ....+|+.+.+++++ |.++.++......
T Consensus 107 ~~~~~------l~~-----------------~~~~-------~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~ 156 (211)
T 3e23_A 107 WAHAC------LLH-----------------VPRD-------ELADVLKLIWRALKPGGLFYASYKSGEGEGRDKLARYY 156 (211)
T ss_dssp EECSC------GGG-----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEECCSSCEECTTSCEE
T ss_pred EecCc------hhh-----------------cCHH-------HHHHHHHHHHHhcCCCcEEEEEEcCCCcccccccchhc
Confidence 97532 211 0111 135678888888787 7887776554332
Q ss_pred --cCHHHHHHHhchhcCCC-cEEe
Q 019692 284 --ENEDVIKSVLPIAMSFG-FQLA 304 (337)
Q Consensus 284 --ENe~vv~~~l~~~~~~~-~~~~ 304 (337)
-+.+.+...++. .| |+.+
T Consensus 157 ~~~~~~~~~~~l~~---aG~f~~~ 177 (211)
T 3e23_A 157 NYPSEEWLRARYAE---AGTWASV 177 (211)
T ss_dssp CCCCHHHHHHHHHH---HCCCSEE
T ss_pred cCCCHHHHHHHHHh---CCCcEEE
Confidence 256667777743 35 5554
No 197
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=98.91 E-value=9.5e-09 Score=105.86 Aligned_cols=109 Identities=18% Similarity=0.238 Sum_probs=82.0
Q ss_pred CchhhhcCeEEEechh------hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcC-----------------------
Q 019692 110 VHPLIVNGCVFLQGKA------SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMK----------------------- 160 (337)
Q Consensus 110 ~~~~~~~G~~~~Qd~s------s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~----------------------- 160 (337)
..++++.|+-..+..+ +..+.......++..|||.|||+|++.+.+|....
T Consensus 157 g~~LhkRgyr~~~~~apl~e~LAa~ll~~~~~~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~ 236 (703)
T 3v97_A 157 GDGLHLRGYRDRAGIAPIKETLAAAIVMRSGWQPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAI 236 (703)
T ss_dssp SSCTTCCSSSCSSCCCSSCHHHHHHHHHHTTCCTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHH
T ss_pred CCccccccccccCCCCCCcHHHHHHHHHhhCCCCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHH
Confidence 3455666664333322 22333445677899999999999999888776531
Q ss_pred ------------------CCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEEEECCCC
Q 019692 161 ------------------GKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 161 ------------------~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
....|+|+|+++.+++.++.|++..|+.+ |++.++|+.++..... .++||+|++|||.
T Consensus 237 w~~~~~ea~~~~~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~-~~~~d~Iv~NPPY 313 (703)
T 3v97_A 237 WQEVKAEAQTRARKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLP-KGPYGTVLSNPPY 313 (703)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCT-TCCCCEEEECCCC
T ss_pred HHHHHHHHHHHhhhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccc-cCCCCEEEeCCCc
Confidence 12579999999999999999999999976 9999999988753321 1379999999997
No 198
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.91 E-value=3.8e-09 Score=93.61 Aligned_cols=110 Identities=15% Similarity=0.093 Sum_probs=82.2
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 207 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 207 (337)
.+...+...++.+|||+|||+|..+..++.. +..+|+++|+++.+++.++++... .++.++++|+..++.. .
T Consensus 34 ~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~--~~~~v~~vD~s~~~~~~a~~~~~~---~~~~~~~~d~~~~~~~---~ 105 (243)
T 3bkw_A 34 ALRAMLPEVGGLRIVDLGCGFGWFCRWAHEH--GASYVLGLDLSEKMLARARAAGPD---TGITYERADLDKLHLP---Q 105 (243)
T ss_dssp HHHHHSCCCTTCEEEEETCTTCHHHHHHHHT--TCSEEEEEESCHHHHHHHHHTSCS---SSEEEEECCGGGCCCC---T
T ss_pred HHHHhccccCCCEEEEEcCcCCHHHHHHHHC--CCCeEEEEcCCHHHHHHHHHhccc---CCceEEEcChhhccCC---C
Confidence 4556677778999999999999999998886 334999999999999999887643 3699999999886532 2
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
++||+|++... +..-++ ...+|+.+.+++++ |.++.++
T Consensus 106 ~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~~~~ 144 (243)
T 3bkw_A 106 DSFDLAYSSLA------LHYVED--------------------------VARLFRTVHQALSPGGHFVFST 144 (243)
T ss_dssp TCEEEEEEESC------GGGCSC--------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CCceEEEEecc------ccccch--------------------------HHHHHHHHHHhcCcCcEEEEEe
Confidence 57999997432 211000 24678888887776 7777765
No 199
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=98.90 E-value=3.8e-09 Score=95.05 Aligned_cols=93 Identities=13% Similarity=0.157 Sum_probs=74.3
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~ 198 (337)
+..+......++..+++.++++|||+|||+|..|..+++.. ++|+|+|+|+.+++.++++++. ..+++++++|+.
T Consensus 12 fl~d~~~~~~i~~~~~~~~~~~VLDiG~G~G~lt~~l~~~~---~~v~~vD~~~~~~~~a~~~~~~--~~~v~~~~~D~~ 86 (244)
T 1qam_A 12 FITSKHNIDKIMTNIRLNEHDNIFEIGSGKGHFTLELVQRC---NFVTAIEIDHKLCKTTENKLVD--HDNFQVLNKDIL 86 (244)
T ss_dssp BCCCHHHHHHHHTTCCCCTTCEEEEECCTTSHHHHHHHHHS---SEEEEECSCHHHHHHHHHHTTT--CCSEEEECCCGG
T ss_pred ccCCHHHHHHHHHhCCCCCCCEEEEEeCCchHHHHHHHHcC---CeEEEEECCHHHHHHHHHhhcc--CCCeEEEEChHH
Confidence 34444455566667778889999999999999999999873 7999999999999999998864 357999999999
Q ss_pred CCCCCCCCCCCccEEEECCCC
Q 019692 199 NLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPC 219 (337)
+++.... ..| .|+.|+|.
T Consensus 87 ~~~~~~~--~~~-~vv~nlPy 104 (244)
T 1qam_A 87 QFKFPKN--QSY-KIFGNIPY 104 (244)
T ss_dssp GCCCCSS--CCC-EEEEECCG
T ss_pred hCCcccC--CCe-EEEEeCCc
Confidence 8764321 235 68999995
No 200
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=98.90 E-value=2.9e-09 Score=97.54 Aligned_cols=112 Identities=13% Similarity=0.022 Sum_probs=81.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeccCCCCCCCCCCCCCccE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GA--ANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g~--~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
.+.+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++... +. ++++++.+|+....... .++||+
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~--~~~fD~ 151 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHP-SVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKS--ENQYDV 151 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCT-TCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTC--CSCEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCC-CCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhC--CCCeeE
Confidence 46899999999999999887752 4579999999999999999998653 33 56999999987643222 257999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
|++|+|... +. +.... ..++++.+.+.+++ |.++..+.+
T Consensus 152 Ii~d~~~~~-~~----~~~l~-----------------------~~~~~~~~~~~L~pgG~lv~~~~~ 191 (275)
T 1iy9_A 152 IMVDSTEPV-GP----AVNLF-----------------------TKGFYAGIAKALKEDGIFVAQTDN 191 (275)
T ss_dssp EEESCSSCC-SC----CCCCS-----------------------TTHHHHHHHHHEEEEEEEEEECCC
T ss_pred EEECCCCCC-Cc----chhhh-----------------------HHHHHHHHHHhcCCCcEEEEEcCC
Confidence 999998521 11 11000 13567777777776 777776554
No 201
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=2.8e-09 Score=96.37 Aligned_cols=110 Identities=16% Similarity=0.070 Sum_probs=81.2
Q ss_pred hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC
Q 019692 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 126 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~ 205 (337)
...+...+.+.++.+|||+|||+|..+..+++ ...+|+++|+++.+++.++++. +++++++|+.+++...
T Consensus 23 ~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~------~~~~~~~d~~~~~~~~- 92 (261)
T 3ege_A 23 VNAIINLLNLPKGSVIADIGAGTGGYSVALAN---QGLFVYAVEPSIVMRQQAVVHP------QVEWFTGYAENLALPD- 92 (261)
T ss_dssp HHHHHHHHCCCTTCEEEEETCTTSHHHHHHHT---TTCEEEEECSCHHHHHSSCCCT------TEEEECCCTTSCCSCT-
T ss_pred HHHHHHHhCCCCCCEEEEEcCcccHHHHHHHh---CCCEEEEEeCCHHHHHHHHhcc------CCEEEECchhhCCCCC-
Confidence 34455566778899999999999999999987 3579999999999988776553 7999999998876432
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCS 279 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS 279 (337)
++||+|++... +..-+| ...+|+++.+.+++|.++..++.
T Consensus 93 --~~fD~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~LkgG~~~~~~~~ 132 (261)
T 3ege_A 93 --KSVDGVISILA------IHHFSH--------------------------LEKSFQEMQRIIRDGTIVLLTFD 132 (261)
T ss_dssp --TCBSEEEEESC------GGGCSS--------------------------HHHHHHHHHHHBCSSCEEEEEEC
T ss_pred --CCEeEEEEcch------HhhccC--------------------------HHHHHHHHHHHhCCcEEEEEEcC
Confidence 67999997532 111011 14677888776666667777665
No 202
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=98.89 E-value=2.2e-09 Score=107.39 Aligned_cols=105 Identities=14% Similarity=0.176 Sum_probs=84.2
Q ss_pred hcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCC--------------CCEEEEEeCCHHHHHHHHH
Q 019692 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG--------------KGKIVACELNKERVRRLKD 180 (337)
Q Consensus 115 ~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~--------------~g~V~avD~~~~~l~~l~~ 180 (337)
..|.|+-...-+.+++.++.++++ +|+|.|||+|++.+.++..+.. ...++|+|+++.+++.++.
T Consensus 223 ~~G~fyTP~~Vv~lmv~ll~p~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~~lA~~ 301 (544)
T 3khk_A 223 QGGQYYTPKSIVTLIVEMLEPYKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTWKLAAM 301 (544)
T ss_dssp CSTTTCCCHHHHHHHHHHHCCCSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHHHHHHH
T ss_pred cCCeEeCCHHHHHHHHHHHhcCCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHHHHHHH
Confidence 457888888888899999998877 9999999999998887665421 3589999999999999999
Q ss_pred HHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEEEECCCCCCc
Q 019692 181 TIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGS 222 (337)
Q Consensus 181 ~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~ 222 (337)
|+...|+. ++.+.++|....+... ..+||+|+.+||.+..
T Consensus 302 Nl~l~gi~~~i~i~~gDtL~~~~~~--~~~fD~Iv~NPPf~~~ 342 (544)
T 3khk_A 302 NMVIRGIDFNFGKKNADSFLDDQHP--DLRADFVMTNPPFNMK 342 (544)
T ss_dssp HHHHTTCCCBCCSSSCCTTTSCSCT--TCCEEEEEECCCSSCC
T ss_pred HHHHhCCCcccceeccchhcCcccc--cccccEEEECCCcCCc
Confidence 99999875 3545788876654322 2579999999998864
No 203
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=98.89 E-value=4.1e-09 Score=96.04 Aligned_cols=108 Identities=14% Similarity=0.153 Sum_probs=81.2
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 207 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 207 (337)
.+...+.+.++.+|||+|||+|..+..++. ..++|+++|+++.+++.+++++ .++.++.+|+.+++..
T Consensus 48 ~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~---~~~~v~gvD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~---- 115 (279)
T 3ccf_A 48 DLLQLLNPQPGEFILDLGCGTGQLTEKIAQ---SGAEVLGTDNAATMIEKARQNY-----PHLHFDVADARNFRVD---- 115 (279)
T ss_dssp HHHHHHCCCTTCEEEEETCTTSHHHHHHHH---TTCEEEEEESCHHHHHHHHHHC-----TTSCEEECCTTTCCCS----
T ss_pred HHHHHhCCCCCCEEEEecCCCCHHHHHHHh---CCCeEEEEECCHHHHHHHHhhC-----CCCEEEECChhhCCcC----
Confidence 344566778899999999999999999988 3579999999999999998775 5688999999887642
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
++||+|++... +..-+| ...+|..+.+.+++ |.++.++..
T Consensus 116 ~~fD~v~~~~~------l~~~~d--------------------------~~~~l~~~~~~LkpgG~l~~~~~~ 156 (279)
T 3ccf_A 116 KPLDAVFSNAM------LHWVKE--------------------------PEAAIASIHQALKSGGRFVAEFGG 156 (279)
T ss_dssp SCEEEEEEESC------GGGCSC--------------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcCEEEEcch------hhhCcC--------------------------HHHHHHHHHHhcCCCcEEEEEecC
Confidence 57999997432 111011 13677888887777 777766543
No 204
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.89 E-value=6e-09 Score=92.42 Aligned_cols=104 Identities=17% Similarity=0.157 Sum_probs=78.9
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++. ...++.++.+|+.+++... ++||+|+
T Consensus 51 ~~~~~~vLDiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~---~~fD~v~ 121 (242)
T 3l8d_A 51 VKKEAEVLDVGCGDGYGTYKLSRT---GYKAVGVDISEVMIQKGKERG---EGPDLSFIKGDLSSLPFEN---EQFEAIM 121 (242)
T ss_dssp SCTTCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHTTT---CBTTEEEEECBTTBCSSCT---TCEEEEE
T ss_pred cCCCCeEEEEcCCCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhc---ccCCceEEEcchhcCCCCC---CCccEEE
Confidence 357899999999999999999886 468999999999999998874 3357999999999876432 6799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
+... +..-++ ...+|..+.+.+++ |.++.++..
T Consensus 122 ~~~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~i~~~~ 155 (242)
T 3l8d_A 122 AINS------LEWTEE--------------------------PLRALNEIKRVLKSDGYACIAILG 155 (242)
T ss_dssp EESC------TTSSSC--------------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EcCh------HhhccC--------------------------HHHHHHHHHHHhCCCeEEEEEEcC
Confidence 6322 211111 13678888888877 777777643
No 205
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=98.88 E-value=5.5e-09 Score=95.62 Aligned_cols=123 Identities=14% Similarity=0.121 Sum_probs=85.8
Q ss_pred HHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC----CcEEEEeccCCCCC-
Q 019692 127 SMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA----ANIEVLHGDFLNLD- 201 (337)
Q Consensus 127 ~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~----~~v~~~~~D~~~~~- 201 (337)
..+...+...++.+|||+|||+|..+..++.. ..+|+|+|+|+.+++.+++++...+. .++.+..+|+..++
T Consensus 47 ~~l~~~l~~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 123 (293)
T 3thr_A 47 AWLLGLLRQHGCHRVLDVACGTGVDSIMLVEE---GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDK 123 (293)
T ss_dssp HHHHHHHHHTTCCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHH
T ss_pred HHHHHHhcccCCCEEEEecCCCCHHHHHHHHC---CCeEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCcc
Confidence 34445555567899999999999999999886 35999999999999999998865443 35888999988765
Q ss_pred --CCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 202 --PKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 202 --~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
.. .++||+|++... ++..-++.. .+. +....+|+++.+.+++ |.++.+++
T Consensus 124 ~~~~---~~~fD~V~~~g~-----~l~~~~~~~------------~~~-------~~~~~~l~~~~~~LkpgG~l~~~~~ 176 (293)
T 3thr_A 124 DVPA---GDGFDAVICLGN-----SFAHLPDSK------------GDQ-------SEHRLALKNIASMVRPGGLLVIDHR 176 (293)
T ss_dssp HSCC---TTCEEEEEECTT-----CGGGSCCSS------------SSS-------HHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred cccc---CCCeEEEEEcCh-----HHhhcCccc------------cCH-------HHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 22 257999997321 111111100 001 1235789999998887 77777665
Q ss_pred C
Q 019692 279 S 279 (337)
Q Consensus 279 S 279 (337)
+
T Consensus 177 ~ 177 (293)
T 3thr_A 177 N 177 (293)
T ss_dssp C
T ss_pred C
Confidence 4
No 206
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.88 E-value=7.9e-09 Score=92.31 Aligned_cols=111 Identities=14% Similarity=0.015 Sum_probs=83.0
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCc
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
..+...++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++++... .++.++++|+..++... ++|
T Consensus 87 ~~l~~~~~~~vLDiG~G~G~~~~~l~~~~--~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~~d~~~~~~~~---~~f 159 (254)
T 1xtp_A 87 ASLPGHGTSRALDCGAGIGRITKNLLTKL--YATTDLLEPVKHMLEEAKRELAGM--PVGKFILASMETATLPP---NTY 159 (254)
T ss_dssp HTSTTCCCSEEEEETCTTTHHHHHTHHHH--CSEEEEEESCHHHHHHHHHHTTTS--SEEEEEESCGGGCCCCS---SCE
T ss_pred HhhcccCCCEEEEECCCcCHHHHHHHHhh--cCEEEEEeCCHHHHHHHHHHhccC--CceEEEEccHHHCCCCC---CCe
Confidence 33456678999999999999999988874 468999999999999999987654 57999999998875432 579
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
|+|++.- ++.. .+.+ ....+|+.+.+++++ |.++.++.
T Consensus 160 D~v~~~~------~l~~-----------------~~~~-------~~~~~l~~~~~~LkpgG~l~i~~~ 198 (254)
T 1xtp_A 160 DLIVIQW------TAIY-----------------LTDA-------DFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEEEES------CGGG-----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEEEEcc------hhhh-----------------CCHH-------HHHHHHHHHHHhcCCCeEEEEEec
Confidence 9999632 1211 0111 135678888887777 77877763
No 207
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=98.87 E-value=2.3e-09 Score=100.43 Aligned_cols=113 Identities=18% Similarity=0.126 Sum_probs=81.6
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--C--CCcEEEEeccCCCCCCCCCCCCCcc
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G--AANIEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g--~~~v~~~~~D~~~~~~~~~~~~~fD 211 (337)
.++.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.+++++... + ..+++++.+|+.+..... .++||
T Consensus 115 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~fD 191 (321)
T 2pt6_A 115 KEPKNVLVVGGGDGGIIRELCKYK-SVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV--TNTYD 191 (321)
T ss_dssp SSCCEEEEEECTTCHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC--CSCEE
T ss_pred CCCCEEEEEcCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhc--CCCce
Confidence 456899999999999999888753 4579999999999999999998762 2 256999999987643211 25799
Q ss_pred EEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 212 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 212 ~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
+|++|++..- |. ++. ..+.++++.+.+.+++ |.++..+.+
T Consensus 192 vIi~d~~~p~-~~----~~~-----------------------l~~~~~l~~~~~~LkpgG~lv~~~~~ 232 (321)
T 2pt6_A 192 VIIVDSSDPI-GP----AET-----------------------LFNQNFYEKIYNALKPNGYCVAQCES 232 (321)
T ss_dssp EEEEECCCSS-SG----GGG-----------------------GSSHHHHHHHHHHEEEEEEEEEEECC
T ss_pred EEEECCcCCC-Cc----chh-----------------------hhHHHHHHHHHHhcCCCcEEEEEcCC
Confidence 9999986321 10 000 0025678888887776 777776544
No 208
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.87 E-value=5.5e-09 Score=87.69 Aligned_cols=123 Identities=14% Similarity=0.122 Sum_probs=87.4
Q ss_pred HhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCcc
Q 019692 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD 211 (337)
.+.+.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++ ..+++++.+| ..+ . .++||
T Consensus 12 ~~~~~~~~~vLDiG~G~G~~~~~l~~~~---~~v~~vD~s~~~~~~a~~~-----~~~v~~~~~d-~~~--~---~~~~D 77 (170)
T 3i9f_A 12 NIFEGKKGVIVDYGCGNGFYCKYLLEFA---TKLYCIDINVIALKEVKEK-----FDSVITLSDP-KEI--P---DNSVD 77 (170)
T ss_dssp HHHSSCCEEEEEETCTTCTTHHHHHTTE---EEEEEECSCHHHHHHHHHH-----CTTSEEESSG-GGS--C---TTCEE
T ss_pred hcCcCCCCeEEEECCCCCHHHHHHHhhc---CeEEEEeCCHHHHHHHHHh-----CCCcEEEeCC-CCC--C---CCceE
Confidence 3456788999999999999999998874 4899999999999999888 4579999999 222 1 25799
Q ss_pred EEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCccc------
Q 019692 212 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVE------ 284 (337)
Q Consensus 212 ~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~E------ 284 (337)
+|++... +..-++ ...+|+.+.+.+++ |.++.++......+
T Consensus 78 ~v~~~~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~ 125 (170)
T 3i9f_A 78 FILFANS------FHDMDD--------------------------KQHVISEVKRILKDDGRVIIIDWRKENTGIGPPLS 125 (170)
T ss_dssp EEEEESC------STTCSC--------------------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSSSSCGG
T ss_pred EEEEccc------hhcccC--------------------------HHHHHHHHHHhcCCCCEEEEEEcCccccccCchHh
Confidence 9997533 111000 24678888887776 78887765433221
Q ss_pred ---CHHHHHHHhchhcCCCcEEec
Q 019692 285 ---NEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 285 ---Ne~vv~~~l~~~~~~~~~~~~ 305 (337)
+.+.+...+ . ||+.+.
T Consensus 126 ~~~~~~~~~~~l----~-Gf~~~~ 144 (170)
T 3i9f_A 126 IRMDEKDYMGWF----S-NFVVEK 144 (170)
T ss_dssp GCCCHHHHHHHT----T-TEEEEE
T ss_pred hhcCHHHHHHHH----h-CcEEEE
Confidence 245566666 2 888764
No 209
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.86 E-value=9.4e-09 Score=91.07 Aligned_cols=73 Identities=19% Similarity=0.271 Sum_probs=62.4
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++.. .+|+++|+++.+++.+++++...+ .+++++++|+.+.+.. .+||+|++
T Consensus 32 ~~~~~vLdiG~G~G~~~~~l~~~----~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~~d~~~~~~~----~~fD~v~~ 102 (243)
T 3d2l_A 32 EPGKRIADIGCGTGTATLLLADH----YEVTGVDLSEEMLEIAQEKAMETN-RHVDFWVQDMRELELP----EPVDAITI 102 (243)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT----SEEEEEESCHHHHHHHHHHHHHTT-CCCEEEECCGGGCCCS----SCEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHhhC----CeEEEEECCHHHHHHHHHhhhhcC-CceEEEEcChhhcCCC----CCcCEEEE
Confidence 46799999999999998887764 689999999999999999998877 4689999999876532 57999997
Q ss_pred CC
Q 019692 216 DP 217 (337)
Q Consensus 216 Dp 217 (337)
..
T Consensus 103 ~~ 104 (243)
T 3d2l_A 103 LC 104 (243)
T ss_dssp CT
T ss_pred eC
Confidence 54
No 210
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=98.86 E-value=2.6e-09 Score=99.39 Aligned_cols=114 Identities=16% Similarity=0.146 Sum_probs=81.0
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeccCCCCCCCCCCCCCc
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GA--ANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g~--~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
...+.+|||+|||+|..+..+++. .+..+|+++|+|+.+++.+++++... ++ .+++++.+|+.+..... .++|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~--~~~f 169 (304)
T 2o07_A 93 HPNPRKVLIIGGGDGGVLREVVKH-PSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQN--QDAF 169 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTC--SSCE
T ss_pred CCCCCEEEEECCCchHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhC--CCCc
Confidence 345689999999999999998875 34579999999999999999998762 33 56999999987642221 2579
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
|+|++|+|... + +. . ...+.++++.+.+++++ |.++..+.+
T Consensus 170 D~Ii~d~~~~~-~-----~~-----------------~-----~l~~~~~l~~~~~~LkpgG~lv~~~~~ 211 (304)
T 2o07_A 170 DVIITDSSDPM-G-----PA-----------------E-----SLFKESYYQLMKTALKEDGVLCCQGEC 211 (304)
T ss_dssp EEEEEECC---------------------------------------CHHHHHHHHHEEEEEEEEEEEEC
T ss_pred eEEEECCCCCC-C-----cc-----------------h-----hhhHHHHHHHHHhccCCCeEEEEecCC
Confidence 99999988321 1 00 0 01134678888888887 777766534
No 211
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.86 E-value=6.9e-09 Score=91.91 Aligned_cols=105 Identities=15% Similarity=0.115 Sum_probs=80.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++...+. ++.++++|+.+++.. ++||+|++.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~---~~~~~~~D~s~~~~~~a~~~~~~~~~-~~~~~~~d~~~~~~~----~~fD~v~~~ 108 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPK---FKNTWAVDLSQEMLSEAENKFRSQGL-KPRLACQDISNLNIN----RKFDLITCC 108 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGG---SSEEEEECSCHHHHHHHHHHHHHTTC-CCEEECCCGGGCCCS----CCEEEEEEC
T ss_pred CCCeEEEeCCCCCHHHHHHHHC---CCcEEEEECCHHHHHHHHHHHhhcCC-CeEEEecccccCCcc----CCceEEEEc
Confidence 7889999999999999988876 36899999999999999999998876 689999999886532 579999974
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
.- ++..-+ +++ ....+|+.+.+++++ |.++.++
T Consensus 109 ~~-----~l~~~~----------------~~~-------~~~~~l~~~~~~L~pgG~l~~~~ 142 (246)
T 1y8c_A 109 LD-----STNYII----------------DSD-------DLKKYFKAVSNHLKEGGVFIFDI 142 (246)
T ss_dssp TT-----GGGGCC----------------SHH-------HHHHHHHHHHTTEEEEEEEEEEE
T ss_pred Cc-----cccccC----------------CHH-------HHHHHHHHHHHhcCCCcEEEEEe
Confidence 30 111100 111 135778899898887 6776543
No 212
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=98.85 E-value=4.1e-09 Score=96.40 Aligned_cols=90 Identities=16% Similarity=0.162 Sum_probs=73.9
Q ss_pred echhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC
Q 019692 122 QGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD 201 (337)
Q Consensus 122 Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~ 201 (337)
+..-...++..+++.++ +|||+|||+|..|..+++. .++|+|+|+|+++++.+++++. + .+++++++|+.+++
T Consensus 32 d~~i~~~Iv~~~~~~~~-~VLEIG~G~G~lt~~L~~~---~~~V~avEid~~~~~~l~~~~~--~-~~v~vi~~D~l~~~ 104 (271)
T 3fut_A 32 SEAHLRRIVEAARPFTG-PVFEVGPGLGALTRALLEA---GAEVTAIEKDLRLRPVLEETLS--G-LPVRLVFQDALLYP 104 (271)
T ss_dssp CHHHHHHHHHHHCCCCS-CEEEECCTTSHHHHHHHHT---TCCEEEEESCGGGHHHHHHHTT--T-SSEEEEESCGGGSC
T ss_pred CHHHHHHHHHhcCCCCC-eEEEEeCchHHHHHHHHHc---CCEEEEEECCHHHHHHHHHhcC--C-CCEEEEECChhhCC
Confidence 33344566677888899 9999999999999999986 2689999999999999999875 2 57999999999886
Q ss_pred CCCCCCCCccEEEECCCCC
Q 019692 202 PKDPAYSEVRAILLDPSCS 220 (337)
Q Consensus 202 ~~~~~~~~fD~IlvDpPCS 220 (337)
... ...+|.|+.++|..
T Consensus 105 ~~~--~~~~~~iv~NlPy~ 121 (271)
T 3fut_A 105 WEE--VPQGSLLVANLPYH 121 (271)
T ss_dssp GGG--SCTTEEEEEEECSS
T ss_pred hhh--ccCccEEEecCccc
Confidence 542 13589999999954
No 213
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=98.84 E-value=3.6e-10 Score=101.63 Aligned_cols=96 Identities=17% Similarity=0.189 Sum_probs=78.6
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~ 198 (337)
+..+......++..+++.++++|||+|||+|..+..++... ++|+|+|+|+.+++.++++++ +..+++++++|+.
T Consensus 11 fl~~~~~~~~i~~~~~~~~~~~VLDiG~G~G~~~~~l~~~~---~~v~~id~~~~~~~~a~~~~~--~~~~v~~~~~D~~ 85 (245)
T 1yub_A 11 FLTSEKVLNQIIKQLNLKETDTVYEIGTGKGHLTTKLAKIS---KQVTSIELDSHLFNLSSEKLK--LNTRVTLIHQDIL 85 (245)
T ss_dssp BCCCTTTHHHHHHHCCCCSSEEEEECSCCCSSCSHHHHHHS---SEEEESSSSCSSSSSSSCTTT--TCSEEEECCSCCT
T ss_pred CCCCHHHHHHHHHhcCCCCCCEEEEEeCCCCHHHHHHHHhC---CeEEEEECCHHHHHHHHHHhc--cCCceEEEECChh
Confidence 45566666777788888899999999999999999999872 799999999999999988876 3467999999999
Q ss_pred CCCCCCCCCCCccEEEECCCCCCc
Q 019692 199 NLDPKDPAYSEVRAILLDPSCSGS 222 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPCSg~ 222 (337)
+++... .++| .|++|||...+
T Consensus 86 ~~~~~~--~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 86 QFQFPN--KQRY-KIVGNIPYHLS 106 (245)
T ss_dssp TTTCCC--SSEE-EEEEECCSSSC
T ss_pred hcCccc--CCCc-EEEEeCCcccc
Confidence 876432 1468 89999997653
No 214
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.83 E-value=2.8e-09 Score=97.22 Aligned_cols=86 Identities=24% Similarity=0.349 Sum_probs=72.1
Q ss_pred HHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC--CC
Q 019692 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD--PA 206 (337)
Q Consensus 129 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~--~~ 206 (337)
+...+.+++|+.++|++||.|+.|..+++. .++|+|+|.|+.+++.+++ ++. ++++++++|+.++.... ..
T Consensus 14 ~le~L~~~~gg~~VD~T~G~GGHS~~il~~---~g~VigiD~Dp~Ai~~A~~-L~~---~rv~lv~~~f~~l~~~L~~~g 86 (285)
T 1wg8_A 14 ALDLLAVRPGGVYVDATLGGAGHARGILER---GGRVIGLDQDPEAVARAKG-LHL---PGLTVVQGNFRHLKRHLAALG 86 (285)
T ss_dssp HHHHHTCCTTCEEEETTCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHH-TCC---TTEEEEESCGGGHHHHHHHTT
T ss_pred HHHhhCCCCCCEEEEeCCCCcHHHHHHHHC---CCEEEEEeCCHHHHHHHHh-hcc---CCEEEEECCcchHHHHHHHcC
Confidence 455678899999999999999999999987 5899999999999999998 644 57999999998875321 11
Q ss_pred CCCccEEEECCCCCC
Q 019692 207 YSEVRAILLDPSCSG 221 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg 221 (337)
..+||.|++|.+.|+
T Consensus 87 ~~~vDgIL~DLGvSS 101 (285)
T 1wg8_A 87 VERVDGILADLGVSS 101 (285)
T ss_dssp CSCEEEEEEECSCCH
T ss_pred CCCcCEEEeCCcccc
Confidence 357999999999885
No 215
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=98.83 E-value=4.8e-09 Score=98.81 Aligned_cols=116 Identities=19% Similarity=0.138 Sum_probs=83.5
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeccCCCCCCCCCCCCCc
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GA--ANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g~--~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
...+.+|||+|||+|..+..+++.. +..+|+++|+|+.+++.+++++..+ |+ .+|+++.+|+.++..... .++|
T Consensus 118 ~~~~~~VLdIG~G~G~~a~~la~~~-~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~-~~~f 195 (334)
T 1xj5_A 118 IPNPKKVLVIGGGDGGVLREVARHA-SIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAA-EGSY 195 (334)
T ss_dssp SSCCCEEEEETCSSSHHHHHHTTCT-TCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSC-TTCE
T ss_pred CCCCCEEEEECCCccHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhcc-CCCc
Confidence 3457899999999999999988753 4579999999999999999998764 44 469999999876522111 2579
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
|+|++|++... +. ++. ..+..+++.+.+++++ |.++..+.+.
T Consensus 196 DlIi~d~~~p~-~~----~~~-----------------------l~~~~~l~~~~~~LkpgG~lv~~~~~~ 238 (334)
T 1xj5_A 196 DAVIVDSSDPI-GP----AKE-----------------------LFEKPFFQSVARALRPGGVVCTQAESL 238 (334)
T ss_dssp EEEEECCCCTT-SG----GGG-----------------------GGSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred cEEEECCCCcc-Cc----chh-----------------------hhHHHHHHHHHHhcCCCcEEEEecCCc
Confidence 99999987211 10 000 0125678888888877 7777765443
No 216
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=98.82 E-value=3.9e-09 Score=97.10 Aligned_cols=115 Identities=19% Similarity=0.154 Sum_probs=83.7
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeccCCCCCCCCCCCCCc
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG----AANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
..++.+|||+|||+|+.+..+++. .+..+|+++|+++.+++.+++++..++ ..+++++.+|+.+..... .++|
T Consensus 76 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~f 152 (283)
T 2i7c_A 76 SKEPKNVLVVGGGDGGIIRELCKY-KSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENV--TNTY 152 (283)
T ss_dssp SSSCCEEEEEECTTSHHHHHHTTC-TTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHC--CSCE
T ss_pred CCCCCeEEEEeCCcCHHHHHHHHc-CCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhC--CCCc
Confidence 345789999999999999988875 345799999999999999999987643 357999999987653221 2579
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
|+|++|++..- |.. .. + .+.+.++.+.+.+++ |.++..+++.
T Consensus 153 D~Ii~d~~~~~-~~~----~~-l----------------------~~~~~l~~~~~~L~pgG~lv~~~~~~ 195 (283)
T 2i7c_A 153 DVIIVDSSDPI-GPA----ET-L----------------------FNQNFYEKIYNALKPNGYCVAQCESL 195 (283)
T ss_dssp EEEEEECCCTT-TGG----GG-G----------------------SSHHHHHHHHHHEEEEEEEEEECCCT
T ss_pred eEEEEcCCCCC-Ccc----hh-h----------------------hHHHHHHHHHHhcCCCcEEEEECCCc
Confidence 99999987431 110 00 0 014677787777776 7888776653
No 217
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.82 E-value=3.9e-09 Score=95.80 Aligned_cols=112 Identities=11% Similarity=0.131 Sum_probs=78.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
.+.+|||+|||+|..+..++.. ..+|+|+|+|+.|++.+++ ..+|.++++|+.+++..+ ++||+|++-
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~---~~~v~gvD~s~~ml~~a~~------~~~v~~~~~~~e~~~~~~---~sfD~v~~~ 106 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEF---FERVHAVDPGEAQIRQALR------HPRVTYAVAPAEDTGLPP---ASVDVAIAA 106 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTT---CSEEEEEESCHHHHHTCCC------CTTEEEEECCTTCCCCCS---SCEEEEEEC
T ss_pred CCCCEEEEcCCCCHHHHHHHHh---CCEEEEEeCcHHhhhhhhh------cCCceeehhhhhhhcccC---CcccEEEEe
Confidence 4679999999999999999876 3689999999999987653 257999999999887543 689999962
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcc--cCHHHHHHHh
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQV--ENEDVIKSVL 293 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~--ENe~vv~~~l 293 (337)
. ++. .. +. .+.+..+.+.+++ |.++..+.+.... +-+.+++.+.
T Consensus 107 ----~--~~h-~~----------------~~----------~~~~~e~~rvLkpgG~l~~~~~~~~~~~~~~~~~~~~~~ 153 (257)
T 4hg2_A 107 ----Q--AMH-WF----------------DL----------DRFWAELRRVARPGAVFAAVTYGLTRVDPEVDAVVDRLY 153 (257)
T ss_dssp ----S--CCT-TC----------------CH----------HHHHHHHHHHEEEEEEEEEEEECCCBCCHHHHHHHHHHH
T ss_pred ----e--ehh-Hh----------------hH----------HHHHHHHHHHcCCCCEEEEEECCCCCCCHHHHHHHHHHH
Confidence 1 221 10 11 2456777777777 7887776665432 2234445443
No 218
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=98.81 E-value=5.7e-09 Score=90.07 Aligned_cols=73 Identities=11% Similarity=-0.070 Sum_probs=59.2
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
.+.++|||+|||+|..++.++... +..+|+|+|+|+++++.+++++.++|+. ++++ .|.....+ .++||+|+
T Consensus 48 ~~~~~VLDlGCG~GplAl~l~~~~-p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~--~d~~~~~~----~~~~DvVL 120 (200)
T 3fzg_A 48 KHVSSILDFGCGFNPLALYQWNEN-EKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRF--LNKESDVY----KGTYDVVF 120 (200)
T ss_dssp CCCSEEEEETCTTHHHHHHHHCSS-CCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEE--ECCHHHHT----TSEEEEEE
T ss_pred CCCCeEEEecCCCCHHHHHHHhcC-CCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEE--ecccccCC----CCCcChhh
Confidence 457899999999999999887764 4459999999999999999999999998 6777 45433322 25799998
Q ss_pred E
Q 019692 215 L 215 (337)
Q Consensus 215 v 215 (337)
+
T Consensus 121 a 121 (200)
T 3fzg_A 121 L 121 (200)
T ss_dssp E
T ss_pred H
Confidence 5
No 219
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.81 E-value=1.4e-08 Score=94.30 Aligned_cols=111 Identities=9% Similarity=0.037 Sum_probs=74.4
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC------cEEEEeccCC------CCCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA------NIEVLHGDFL------NLDPKD 204 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~------~v~~~~~D~~------~~~~~~ 204 (337)
+|.+|||+|||+|+.+..++.. +.+.|+|+|+|+.+++.|+++....+.. ++.+.+.|.. ++....
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~--~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~ 125 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYG--EIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVF 125 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTC
T ss_pred CCCeEEEEecCCcHhHHHHHhc--CCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccc
Confidence 5889999999999866655542 3468999999999999999998877653 3677777762 221111
Q ss_pred CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 205 PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 205 ~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
+ .++||+|++ .. ++.- .+ +.++ +..+|+++.+++++ |.++.+|..
T Consensus 126 ~-~~~FD~V~~----~~--~lhy----~~------------~~~~-------~~~~l~~~~r~LkpGG~~i~~~~~ 171 (302)
T 2vdw_A 126 Y-FGKFNIIDW----QF--AIHY----SF------------HPRH-------YATVMNNLSELTASGGKVLITTMD 171 (302)
T ss_dssp C-SSCEEEEEE----ES--CGGG----TC------------STTT-------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred c-CCCeeEEEE----Cc--hHHH----hC------------CHHH-------HHHHHHHHHHHcCCCCEEEEEeCC
Confidence 1 257999984 32 1110 00 0001 24789999998887 788877653
No 220
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=98.81 E-value=1.1e-08 Score=93.94 Aligned_cols=92 Identities=21% Similarity=0.257 Sum_probs=71.3
Q ss_pred hhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q 019692 124 KASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202 (337)
Q Consensus 124 ~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~-~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~ 202 (337)
.-...++..+++.++++|||+|||+|..|..++..... .++|+|+|+|+.+++.++++. ..+++++++|+.+++.
T Consensus 29 ~i~~~iv~~~~~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~----~~~v~~i~~D~~~~~~ 104 (279)
T 3uzu_A 29 GVIDAIVAAIRPERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF----GELLELHAGDALTFDF 104 (279)
T ss_dssp HHHHHHHHHHCCCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH----GGGEEEEESCGGGCCG
T ss_pred HHHHHHHHhcCCCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc----CCCcEEEECChhcCCh
Confidence 34455667778899999999999999999999987532 245999999999999999983 3579999999998764
Q ss_pred CCCCC-C--CccEEEECCCC
Q 019692 203 KDPAY-S--EVRAILLDPSC 219 (337)
Q Consensus 203 ~~~~~-~--~fD~IlvDpPC 219 (337)
..... . ..+.|+.++|.
T Consensus 105 ~~~~~~~~~~~~~vv~NlPY 124 (279)
T 3uzu_A 105 GSIARPGDEPSLRIIGNLPY 124 (279)
T ss_dssp GGGSCSSSSCCEEEEEECCH
T ss_pred hHhcccccCCceEEEEccCc
Confidence 32100 0 24578999984
No 221
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=98.81 E-value=9.1e-09 Score=92.93 Aligned_cols=94 Identities=21% Similarity=0.237 Sum_probs=73.5
Q ss_pred EEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCC
Q 019692 119 VFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFL 198 (337)
Q Consensus 119 ~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~ 198 (337)
|.....-...++..+.+.++++|||+|||+|..|..+++. +..+|+|+|+|+.+++.++++ +..+++++++|+.
T Consensus 13 fl~d~~i~~~iv~~~~~~~~~~VLDiG~G~G~lt~~L~~~--~~~~v~avEid~~~~~~~~~~----~~~~v~~i~~D~~ 86 (249)
T 3ftd_A 13 LLVSEGVLKKIAEELNIEEGNTVVEVGGGTGNLTKVLLQH--PLKKLYVIELDREMVENLKSI----GDERLEVINEDAS 86 (249)
T ss_dssp CEECHHHHHHHHHHTTCCTTCEEEEEESCHHHHHHHHTTS--CCSEEEEECCCHHHHHHHTTS----CCTTEEEECSCTT
T ss_pred ccCCHHHHHHHHHhcCCCCcCEEEEEcCchHHHHHHHHHc--CCCeEEEEECCHHHHHHHHhc----cCCCeEEEEcchh
Confidence 3344444555667778889999999999999999998875 347999999999999999887 3457999999999
Q ss_pred CCCCCCCCCCCccEEEECCCCC
Q 019692 199 NLDPKDPAYSEVRAILLDPSCS 220 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPCS 220 (337)
+++.... ...+ .|+.++|..
T Consensus 87 ~~~~~~~-~~~~-~vv~NlPy~ 106 (249)
T 3ftd_A 87 KFPFCSL-GKEL-KVVGNLPYN 106 (249)
T ss_dssp TCCGGGS-CSSE-EEEEECCTT
T ss_pred hCChhHc-cCCc-EEEEECchh
Confidence 8864431 1233 899999964
No 222
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.81 E-value=9.1e-09 Score=91.13 Aligned_cols=101 Identities=17% Similarity=0.136 Sum_probs=76.5
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..++.+|||+|||+|..+..+++.. .+|+++|+++.+++.+++++.. ++.++++|+.++.+ .++||+|+
T Consensus 40 ~~~~~~vLDiGcG~G~~~~~l~~~~---~~v~gvD~s~~~~~~a~~~~~~----~v~~~~~d~~~~~~----~~~fD~v~ 108 (250)
T 2p7i_A 40 FFRPGNLLELGSFKGDFTSRLQEHF---NDITCVEASEEAISHAQGRLKD----GITYIHSRFEDAQL----PRRYDNIV 108 (250)
T ss_dssp GCCSSCEEEESCTTSHHHHHHTTTC---SCEEEEESCHHHHHHHHHHSCS----CEEEEESCGGGCCC----SSCEEEEE
T ss_pred hcCCCcEEEECCCCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhhhC----CeEEEEccHHHcCc----CCcccEEE
Confidence 3568899999999999999888752 4799999999999999988643 69999999988732 25799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHh-CCCCC-cEEEEEcC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHAL-SFPGV-ERVVYSTC 278 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~-~~~~~-G~lvYsTC 278 (337)
+.- ++..-+| ...+|+.+. +++++ |.++.++.
T Consensus 109 ~~~------~l~~~~~--------------------------~~~~l~~~~~~~LkpgG~l~i~~~ 142 (250)
T 2p7i_A 109 LTH------VLEHIDD--------------------------PVALLKRINDDWLAEGGRLFLVCP 142 (250)
T ss_dssp EES------CGGGCSS--------------------------HHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred Ehh------HHHhhcC--------------------------HHHHHHHHHHHhcCCCCEEEEEcC
Confidence 632 2221111 147889999 98887 77777653
No 223
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.81 E-value=1.4e-08 Score=88.59 Aligned_cols=103 Identities=17% Similarity=0.043 Sum_probs=75.3
Q ss_pred HhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC---CCCCCCCC
Q 019692 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL---DPKDPAYS 208 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~---~~~~~~~~ 208 (337)
.+...++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ .++.+...|+.++ +... ..
T Consensus 47 ~~~~~~~~~vLdiG~G~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~------~~~~~~~~~~~~~~~~~~~~--~~ 115 (227)
T 3e8s_A 47 AILGRQPERVLDLGCGEGWLLRALADR---GIEAVGVDGDRTLVDAARAA------GAGEVHLASYAQLAEAKVPV--GK 115 (227)
T ss_dssp HHHHTCCSEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHT------CSSCEEECCHHHHHTTCSCC--CC
T ss_pred HhhcCCCCEEEEeCCCCCHHHHHHHHC---CCEEEEEcCCHHHHHHHHHh------cccccchhhHHhhccccccc--CC
Confidence 344456799999999999999988876 46899999999999999877 3466777877666 2222 24
Q ss_pred CccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 209 ~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
+||+|++..... .++ ...+|+.+.+++++ |.++.++-
T Consensus 116 ~fD~v~~~~~l~-------~~~--------------------------~~~~l~~~~~~L~pgG~l~~~~~ 153 (227)
T 3e8s_A 116 DYDLICANFALL-------HQD--------------------------IIELLSAMRTLLVPGGALVIQTL 153 (227)
T ss_dssp CEEEEEEESCCC-------SSC--------------------------CHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CccEEEECchhh-------hhh--------------------------HHHHHHHHHHHhCCCeEEEEEec
Confidence 599999854321 111 14678888888887 77777654
No 224
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.80 E-value=7.1e-09 Score=95.65 Aligned_cols=105 Identities=15% Similarity=0.158 Sum_probs=73.5
Q ss_pred hCCCCCCeEEeecC------CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEE-EeccCCCCCCCCC
Q 019692 133 LAPKPGWKVLDACS------APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEV-LHGDFLNLDPKDP 205 (337)
Q Consensus 133 l~~~~g~~VLDl~a------G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~-~~~D~~~~~~~~~ 205 (337)
+.+++|++|||+|| |||+ ..+++.++..++|+|+|+++. +.+|++ +++|+.+++..
T Consensus 59 l~l~~g~~VLDLGcGsg~~~GpGs--~~~a~~~~~~~~V~gvDis~~-------------v~~v~~~i~gD~~~~~~~-- 121 (290)
T 2xyq_A 59 LAVPYNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDF-------------VSDADSTLIGDCATVHTA-- 121 (290)
T ss_dssp CCCCTTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCC-------------BCSSSEEEESCGGGCCCS--
T ss_pred cCCCCCCEEEEeCCCCCCCCCcHH--HHHHHHcCCCCEEEEEECCCC-------------CCCCEEEEECccccCCcc--
Confidence 35788999999999 7787 556667665689999999987 246778 99999876532
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
.+||+|++|+++...|... .+. . + . ..+...+|+.+.+++++ |.++...
T Consensus 122 --~~fD~Vvsn~~~~~~g~~~--~d~-----~-----~--~-------~~l~~~~l~~a~r~LkpGG~~v~~~ 171 (290)
T 2xyq_A 122 --NKWDLIISDMYDPRTKHVT--KEN-----D-----S--K-------EGFFTYLCGFIKQKLALGGSIAVKI 171 (290)
T ss_dssp --SCEEEEEECCCCCC---CC--SCC-----C-----C--C-------CTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred --CcccEEEEcCCcccccccc--ccc-----c-----c--h-------HHHHHHHHHHHHHhcCCCcEEEEEE
Confidence 5799999998877666532 111 0 0 0 11235788899898887 7777643
No 225
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=98.80 E-value=6.1e-09 Score=97.22 Aligned_cols=116 Identities=12% Similarity=0.031 Sum_probs=82.3
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--C---CCcEEEEeccCCCCCCCCCCCCCc
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G---AANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g---~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
..+.+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++... | -.+++++.+|+.+..... .++|
T Consensus 76 ~~~~~VLdiG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~--~~~f 152 (314)
T 1uir_A 76 PEPKRVLIVGGGEGATLREVLKHP-TVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERT--EERY 152 (314)
T ss_dssp SCCCEEEEEECTTSHHHHHHTTST-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHC--CCCE
T ss_pred CCCCeEEEEcCCcCHHHHHHHhcC-CCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhc--CCCc
Confidence 356899999999999999888753 4579999999999999999998762 2 357999999987742211 2579
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
|+|++|++... +. ...+.. -...+.++.+.+.+++ |.++..+.+
T Consensus 153 D~Ii~d~~~~~-~~-~~~~~~-----------------------l~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 153 DVVIIDLTDPV-GE-DNPARL-----------------------LYTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp EEEEEECCCCB-ST-TCGGGG-----------------------GSSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cEEEECCCCcc-cc-cCcchh-----------------------ccHHHHHHHHHHhcCCCcEEEEEccC
Confidence 99999987432 00 000000 0024678888888887 777665444
No 226
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=98.77 E-value=7e-09 Score=96.36 Aligned_cols=115 Identities=13% Similarity=0.086 Sum_probs=80.8
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh----CCCcEEEEeccCCCCCCCCCCCCCc
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS----GAANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~----g~~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
..++.+|||+|||+|+.+..+++. .+..+|+++|+|+.+++.+++++... ...+++++.+|+..+..... .++|
T Consensus 93 ~~~~~~VLdiG~G~G~~~~~l~~~-~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~-~~~f 170 (304)
T 3bwc_A 93 HPKPERVLIIGGGDGGVLREVLRH-GTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTP-DNTY 170 (304)
T ss_dssp SSSCCEEEEEECTTSHHHHHHHTC-TTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSC-TTCE
T ss_pred CCCCCeEEEEcCCCCHHHHHHHhC-CCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhcc-CCce
Confidence 356789999999999999998875 34579999999999999999988542 23569999999877643211 2579
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
|+|++|++... + |.. . -.+.++++.+.+.+++ |.++..+.+
T Consensus 171 DvIi~d~~~~~-~-----~~~-----------------~-----l~~~~~l~~~~~~LkpgG~lv~~~~~ 212 (304)
T 3bwc_A 171 DVVIIDTTDPA-G-----PAS-----------------K-----LFGEAFYKDVLRILKPDGICCNQGES 212 (304)
T ss_dssp EEEEEECC-------------------------------------CCHHHHHHHHHHEEEEEEEEEEECC
T ss_pred eEEEECCCCcc-c-----cch-----------------h-----hhHHHHHHHHHHhcCCCcEEEEecCC
Confidence 99999987321 0 000 0 0124677788887887 777665443
No 227
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.77 E-value=3.6e-08 Score=91.41 Aligned_cols=114 Identities=13% Similarity=-0.001 Sum_probs=81.2
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh-------CCCcEEEEeccCCCCCC---CCC
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-------GAANIEVLHGDFLNLDP---KDP 205 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~-------g~~~v~~~~~D~~~~~~---~~~ 205 (337)
.++.+|||+|||+|..+..++.. +...|+++|+++.+++.++++.... +..++.++++|+...+. -..
T Consensus 33 ~~~~~VLDlGcG~G~~~~~l~~~--~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~ 110 (313)
T 3bgv_A 33 KRDITVLDLGCGKGGDLLKWKKG--RINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRD 110 (313)
T ss_dssp --CCEEEEETCTTTTTHHHHHHT--TCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSS
T ss_pred CCCCEEEEECCCCcHHHHHHHhc--CCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhccc
Confidence 36889999999999999988873 4579999999999999999998875 44579999999988751 110
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
..++||+|++.- ++..-. .+.. ....+|.++.+.+++ |.++.+|..
T Consensus 111 ~~~~fD~V~~~~------~l~~~~---------------~~~~-------~~~~~l~~~~~~LkpgG~li~~~~~ 157 (313)
T 3bgv_A 111 PQMCFDICSCQF------VCHYSF---------------ESYE-------QADMMLRNACERLSPGGYFIGTTPN 157 (313)
T ss_dssp TTCCEEEEEEET------CGGGGG---------------GSHH-------HHHHHHHHHHTTEEEEEEEEEEEEC
T ss_pred CCCCEEEEEEec------chhhcc---------------CCHH-------HHHHHHHHHHHHhCCCcEEEEecCC
Confidence 124799999732 111000 0111 134788899998887 777776654
No 228
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=98.77 E-value=4.5e-09 Score=99.38 Aligned_cols=133 Identities=14% Similarity=0.091 Sum_probs=92.7
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC---CC-----cEEEEeccCCCCCCCC-CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG---AA-----NIEVLHGDFLNLDPKD-PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g---~~-----~v~~~~~D~~~~~~~~-~~~ 207 (337)
.+.+|||+|+|.|+.+..+++. +..+|+++|+|+.+++.+++++...+ ++ +++++.+|+..+.... ...
T Consensus 188 ~pkrVL~IGgG~G~~arellk~--~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~ 265 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEG 265 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHT
T ss_pred CCCEEEEEECChhHHHHHHHHC--CCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccC
Confidence 4689999999999999888775 24799999999999999999976432 21 5999999998765321 002
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCH
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENE 286 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe 286 (337)
++||+|++|||-...|. .+..+ .-.++.+.+++.+.+.|++ |.++--+||.+..|.-
T Consensus 266 ~~fDvII~D~~d~P~~~---------------------~p~~L-~t~eFy~~~~~~~~~~L~pgGilv~qs~s~~~~e~~ 323 (364)
T 2qfm_A 266 REFDYVINDLTAVPIST---------------------SPEED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLTEAL 323 (364)
T ss_dssp CCEEEEEEECCSSCCCC---------------------C-----CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCHHHH
T ss_pred CCceEEEECCCCcccCc---------------------Cchhh-hHHHHHHHHHHHHHhhCCCCcEEEEEcCCcchHHHH
Confidence 57999999998411110 01111 1134556666777788887 8888888998876655
Q ss_pred HHHHHHh
Q 019692 287 DVIKSVL 293 (337)
Q Consensus 287 ~vv~~~l 293 (337)
...+..|
T Consensus 324 ~~~~~~l 330 (364)
T 2qfm_A 324 SLYEEQL 330 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5666555
No 229
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.76 E-value=1.9e-08 Score=87.42 Aligned_cols=98 Identities=14% Similarity=0.030 Sum_probs=73.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
++.+|||+|||+|..+..+ +..+|+++|+++.+++.+++++ .++.++++|+.+++... ++||+|++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l-----~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~---~~fD~v~~~ 102 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL-----PYPQKVGVEPSEAMLAVGRRRA-----PEATWVRAWGEALPFPG---ESFDVVLLF 102 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC-----CCSEEEEECCCHHHHHHHHHHC-----TTSEEECCCTTSCCSCS---SCEEEEEEE
T ss_pred CCCeEEEECCCCCHhHHhC-----CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcccccCCCCC---CcEEEEEEc
Confidence 7899999999999888766 2238999999999999998876 56889999998876332 579999975
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
.. +..-++ ...+|+.+.+++++ |.++.++..
T Consensus 103 ~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~i~~~~ 134 (211)
T 2gs9_A 103 TT------LEFVED--------------------------VERVLLEARRVLRPGGALVVGVLE 134 (211)
T ss_dssp SC------TTTCSC--------------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred Ch------hhhcCC--------------------------HHHHHHHHHHHcCCCCEEEEEecC
Confidence 32 211000 24678888888877 777777644
No 230
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.76 E-value=2.9e-09 Score=97.72 Aligned_cols=73 Identities=12% Similarity=0.040 Sum_probs=54.3
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH---HHhCCCcEEEE--eccCCCCCCCCCCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI---KLSGAANIEVL--HGDFLNLDPKDPAYSE 209 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~---~~~g~~~v~~~--~~D~~~~~~~~~~~~~ 209 (337)
+++|.+|||+|||||+.+..+++. ++|+|+|+++ ++..++++. +.+| .+|.++ ++|+.+++ ..+
T Consensus 80 ~~~g~~VLDlGcGtG~~s~~la~~----~~V~gVD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~-----~~~ 148 (276)
T 2wa2_A 80 VELKGTVVDLGCGRGSWSYYAASQ----PNVREVKAYT-LGTSGHEKPRLVETFG-WNLITFKSKVDVTKME-----PFQ 148 (276)
T ss_dssp CCCCEEEEEESCTTCHHHHHHHTS----TTEEEEEEEC-CCCTTSCCCCCCCCTT-GGGEEEECSCCGGGCC-----CCC
T ss_pred CCCCCEEEEeccCCCHHHHHHHHc----CCEEEEECch-hhhhhhhchhhhhhcC-CCeEEEeccCcHhhCC-----CCC
Confidence 568999999999999999988875 6899999998 533222110 0011 168889 89998865 157
Q ss_pred ccEEEECCC
Q 019692 210 VRAILLDPS 218 (337)
Q Consensus 210 fD~IlvDpP 218 (337)
||+|++|..
T Consensus 149 fD~Vvsd~~ 157 (276)
T 2wa2_A 149 ADTVLCDIG 157 (276)
T ss_dssp CSEEEECCC
T ss_pred cCEEEECCC
Confidence 999999976
No 231
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=98.75 E-value=1.3e-08 Score=104.45 Aligned_cols=159 Identities=13% Similarity=0.150 Sum_probs=99.1
Q ss_pred cCeEEEechhhHHHHHH----hC--CCCCCeEEeecCCchhHHHHHHHHcC--CCCEEEEEeCCHHHHHHH--HHHHHH-
Q 019692 116 NGCVFLQGKASSMVAAA----LA--PKPGWKVLDACSAPGNKTVHLAALMK--GKGKIVACELNKERVRRL--KDTIKL- 184 (337)
Q Consensus 116 ~G~~~~Qd~ss~l~~~~----l~--~~~g~~VLDl~aG~G~kt~~la~~~~--~~g~V~avD~~~~~l~~l--~~~~~~- 184 (337)
.|.++....-+.+++.+ +. ..++.+|||.|||+|++.+.++..+. ....++|+|+++.+++.+ +.|+..
T Consensus 294 ~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlNL~lN 373 (878)
T 3s1s_A 294 EGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLGLLFP 373 (878)
T ss_dssp CBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHHTTST
T ss_pred CceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHHHHHh
Confidence 46666655555555555 32 23688999999999999999888763 135799999999999999 666554
Q ss_pred ---hCCCcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHH--------
Q 019692 185 ---SGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKL-------- 253 (337)
Q Consensus 185 ---~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l-------- 253 (337)
.|+.+..+...|+....... ..+||+|+.|||..+...... ...+...++
T Consensus 374 ~LlhGi~~~~I~~dD~L~~~~~~--~~kFDVVIgNPPYg~~~~~~~-----------------e~kd~~~r~~~g~p~~p 434 (878)
T 3s1s_A 374 QLVSSNNAPTITGEDVCSLNPED--FANVSVVVMNPPYVSGVTDPA-----------------IKRKFAHKIIQLTGNRP 434 (878)
T ss_dssp TTCBTTBCCEEECCCGGGCCGGG--GTTEEEEEECCBCCSSCCCHH-----------------HHHHHHHHHHHHHSSCC
T ss_pred hhhcCCCcceEEecchhcccccc--cCCCCEEEECCCccccccchh-----------------hhhhHHHHhhhhccccc
Confidence 24444456667776543221 357999999999865321100 000001111
Q ss_pred ------HHHHHHHHHHHhCCCCC-cEEEEEcC-CCCccc--CHHHHHHHh
Q 019692 254 ------SAFQKKALRHALSFPGV-ERVVYSTC-SIHQVE--NEDVIKSVL 293 (337)
Q Consensus 254 ------~~~Q~~lL~~A~~~~~~-G~lvYsTC-S~~~~E--Ne~vv~~~l 293 (337)
..+...++.++++++++ |++++.+= ++.... ...-+.+.|
T Consensus 435 ~s~~G~~DLy~aFIe~Al~lLKpGGrLAfIlP~s~Lf~sg~~~kkLRk~L 484 (878)
T 3s1s_A 435 QTLFGQIGVEALFLELVTELVQDGTVISAIMPKQYLTAQGNESKAFREFL 484 (878)
T ss_dssp SSCSSSCCHHHHHHHHHHHHSCTTCEEEEEEETHHHHCCSHHHHHHHHHH
T ss_pred cccccccchHHHHHHHHHHhcCCCcEEEEEEChHHhccCChHHHHHHHHH
Confidence 12466789999998876 87776543 333212 244555555
No 232
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=98.75 E-value=6.4e-09 Score=97.13 Aligned_cols=114 Identities=16% Similarity=0.128 Sum_probs=80.0
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--CC--CcEEEEeccCCCCCCCCCCCCCcc
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--GA--ANIEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g~--~~v~~~~~D~~~~~~~~~~~~~fD 211 (337)
..+.+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++... |+ .+|+++.+|+....... .++||
T Consensus 107 ~~~~~VLdIG~G~G~~~~~l~~~~-~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~--~~~fD 183 (314)
T 2b2c_A 107 PDPKRVLIIGGGDGGILREVLKHE-SVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNH--KNEFD 183 (314)
T ss_dssp SSCCEEEEESCTTSHHHHHHTTCT-TCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHC--TTCEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHcC-CCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhc--CCCce
Confidence 346899999999999999988753 4579999999999999999998764 33 56999999987643221 25799
Q ss_pred EEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 212 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 212 ~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
+|++|++.. .+ +. .. ..+.++++.+.+++++ |.++..+.+.
T Consensus 184 ~Ii~d~~~~-~~-----~~-----------------~~-----l~t~~~l~~~~~~LkpgG~lv~~~~~~ 225 (314)
T 2b2c_A 184 VIITDSSDP-VG-----PA-----------------ES-----LFGQSYYELLRDALKEDGILSSQGESV 225 (314)
T ss_dssp EEEECCC-----------------------------------------HHHHHHHHEEEEEEEEEECCCT
T ss_pred EEEEcCCCC-CC-----cc-----------------hh-----hhHHHHHHHHHhhcCCCeEEEEECCCc
Confidence 999999732 11 00 00 0125678888887877 7777766443
No 233
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.74 E-value=3.5e-09 Score=96.60 Aligned_cols=74 Identities=15% Similarity=0.043 Sum_probs=54.5
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHH---HHhCCCcEEEE--eccCCCCCCCCCCCC
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTI---KLSGAANIEVL--HGDFLNLDPKDPAYS 208 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~---~~~g~~~v~~~--~~D~~~~~~~~~~~~ 208 (337)
.+++|.+|||+|||||+.+..+++. ++|+|+|+++ ++..++++. +.+| .+|.++ ++|+.+++ ..
T Consensus 71 ~~~~g~~VLDlGcGtG~~s~~la~~----~~V~gvD~s~-m~~~a~~~~~~~~~~~-~~v~~~~~~~D~~~l~-----~~ 139 (265)
T 2oxt_A 71 YVELTGRVVDLGCGRGGWSYYAASR----PHVMDVRAYT-LGVGGHEVPRITESYG-WNIVKFKSRVDIHTLP-----VE 139 (265)
T ss_dssp SCCCCEEEEEESCTTSHHHHHHHTS----TTEEEEEEEC-CCCSSCCCCCCCCBTT-GGGEEEECSCCTTTSC-----CC
T ss_pred CCCCCCEEEEeCcCCCHHHHHHHHc----CcEEEEECch-hhhhhhhhhhhhhccC-CCeEEEecccCHhHCC-----CC
Confidence 3578999999999999999888875 6899999998 432221110 0111 168888 89998875 15
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
+||+|++|..
T Consensus 140 ~fD~V~sd~~ 149 (265)
T 2oxt_A 140 RTDVIMCDVG 149 (265)
T ss_dssp CCSEEEECCC
T ss_pred CCcEEEEeCc
Confidence 7999999976
No 234
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.73 E-value=3.3e-08 Score=87.31 Aligned_cols=105 Identities=13% Similarity=0.140 Sum_probs=78.0
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++... .+|+++|+++.+++.++++. .++.++.+|+.+++. . .+||+|++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~---~~v~~~D~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~-~---~~~D~v~~ 106 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEF---GDTAGLELSEDMLTHARKRL-----PDATLHQGDMRDFRL-G---RKFSAVVS 106 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHH---SEEEEEESCHHHHHHHHHHC-----TTCEEEECCTTTCCC-S---SCEEEEEE
T ss_pred CCCCeEEEecccCCHHHHHHHHhC---CcEEEEeCCHHHHHHHHHhC-----CCCEEEECCHHHccc-C---CCCcEEEE
Confidence 578899999999999999999874 38999999999999998874 468899999988754 2 57999994
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
+. +++..-+ +++ ....+|+.+.+++++ |.++.+++..
T Consensus 107 ----~~-~~~~~~~----------------~~~-------~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 107 ----MF-SSVGYLK----------------TTE-------ELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp ----CT-TGGGGCC----------------SHH-------HHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred ----cC-chHhhcC----------------CHH-------HHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 21 1221100 111 235678888888887 7888776554
No 235
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.73 E-value=1.9e-07 Score=88.23 Aligned_cols=115 Identities=10% Similarity=0.076 Sum_probs=87.1
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~ 206 (337)
.+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..|+.+ |+++.+|+.+.+.
T Consensus 181 ~l~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~---- 254 (359)
T 1x19_A 181 LLLEEAKLDGVKKMIDVGGGIGDISAAMLKHF-PELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESY---- 254 (359)
T ss_dssp HHHHHCCCTTCCEEEEESCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCC----
T ss_pred HHHHhcCCCCCCEEEEECCcccHHHHHHHHHC-CCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCC----
Confidence 34445567788999999999999999999985 4579999999 999999999999998865 9999999987642
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
..+|+|++.- ++.. ++. +...++|+++.+.+++ |.++.....
T Consensus 255 -~~~D~v~~~~------vlh~-----------------~~d-------~~~~~~l~~~~~~L~pgG~l~i~e~~ 297 (359)
T 1x19_A 255 -PEADAVLFCR------ILYS-----------------ANE-------QLSTIMCKKAFDAMRSGGRLLILDMV 297 (359)
T ss_dssp -CCCSEEEEES------CGGG-----------------SCH-------HHHHHHHHHHHTTCCTTCEEEEEEEC
T ss_pred -CCCCEEEEec------hhcc-----------------CCH-------HHHHHHHHHHHHhcCCCCEEEEEecc
Confidence 2349999732 2211 111 1236789999998887 777665544
No 236
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.72 E-value=5.5e-09 Score=97.37 Aligned_cols=89 Identities=20% Similarity=0.337 Sum_probs=73.2
Q ss_pred HHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC--C
Q 019692 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP--A 206 (337)
Q Consensus 129 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~--~ 206 (337)
+...|.++||+.++|+++|.||.|..+++.+++.|+|+|+|.|+.+++.++ ++ .-.+++++++++.++..... .
T Consensus 49 vl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL---~~~Rv~lv~~nF~~l~~~L~~~g 124 (347)
T 3tka_A 49 AVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TI---DDPRFSIIHGPFSALGEYVAERD 124 (347)
T ss_dssp HHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TC---CCTTEEEEESCGGGHHHHHHHTT
T ss_pred HHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hh---cCCcEEEEeCCHHHHHHHHHhcC
Confidence 456678999999999999999999999999888899999999999999884 33 33579999999988742211 1
Q ss_pred C-CCccEEEECCCCCC
Q 019692 207 Y-SEVRAILLDPSCSG 221 (337)
Q Consensus 207 ~-~~fD~IlvDpPCSg 221 (337)
. +++|.|+.|-.||+
T Consensus 125 ~~~~vDgILfDLGVSS 140 (347)
T 3tka_A 125 LIGKIDGILLDLGVSS 140 (347)
T ss_dssp CTTCEEEEEEECSCCH
T ss_pred CCCcccEEEECCccCH
Confidence 1 26999999999994
No 237
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.71 E-value=3.6e-08 Score=87.79 Aligned_cols=110 Identities=14% Similarity=0.085 Sum_probs=78.5
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC--CCCCcc
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP--AYSEVR 211 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~--~~~~fD 211 (337)
.+.++.+|||+|||+|..+..++... .+|+++|+|+.+++.+++++ ...+++++++|+.+++.... ....||
T Consensus 53 ~~~~~~~vLD~GcG~G~~~~~la~~~---~~v~gvD~s~~~~~~a~~~~---~~~~~~~~~~d~~~~~~~~~~~~~~~~d 126 (245)
T 3ggd_A 53 LFNPELPLIDFACGNGTQTKFLSQFF---PRVIGLDVSKSALEIAAKEN---TAANISYRLLDGLVPEQAAQIHSEIGDA 126 (245)
T ss_dssp TSCTTSCEEEETCTTSHHHHHHHHHS---SCEEEEESCHHHHHHHHHHS---CCTTEEEEECCTTCHHHHHHHHHHHCSC
T ss_pred ccCCCCeEEEEcCCCCHHHHHHHHhC---CCEEEEECCHHHHHHHHHhC---cccCceEEECcccccccccccccccCcc
Confidence 35788999999999999999999874 38999999999999999886 33479999999987543210 002389
Q ss_pred EEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 212 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 212 ~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
+|++.....-. +.+ ....+|+.+.+.+++ |.++.+..+
T Consensus 127 ~v~~~~~~~~~-----------------------~~~-------~~~~~l~~~~~~LkpgG~l~i~~~~ 165 (245)
T 3ggd_A 127 NIYMRTGFHHI-----------------------PVE-------KRELLGQSLRILLGKQGAMYLIELG 165 (245)
T ss_dssp EEEEESSSTTS-----------------------CGG-------GHHHHHHHHHHHHTTTCEEEEEEEC
T ss_pred EEEEcchhhcC-----------------------CHH-------HHHHHHHHHHHHcCCCCEEEEEeCC
Confidence 99976432211 000 024677777777776 777766554
No 238
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=98.70 E-value=5.1e-08 Score=86.08 Aligned_cols=72 Identities=15% Similarity=0.155 Sum_probs=59.4
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCC-CCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN-LDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~-~~~~~~~~~~fD~I 213 (337)
+.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++ ..+++++++|+.+ ++... .++||+|
T Consensus 46 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~~vD~s~~~~~~a~~~-----~~~~~~~~~d~~~~~~~~~--~~~fD~v 115 (226)
T 3m33_A 46 LTPQTRVLEAGCGHGPDAARFGPQ---AARWAAYDFSPELLKLARAN-----APHADVYEWNGKGELPAGL--GAPFGLI 115 (226)
T ss_dssp CCTTCEEEEESCTTSHHHHHHGGG---SSEEEEEESCHHHHHHHHHH-----CTTSEEEECCSCSSCCTTC--CCCEEEE
T ss_pred CCCCCeEEEeCCCCCHHHHHHHHc---CCEEEEEECCHHHHHHHHHh-----CCCceEEEcchhhccCCcC--CCCEEEE
Confidence 467899999999999999999886 36999999999999999988 4579999999954 43221 2579999
Q ss_pred EEC
Q 019692 214 LLD 216 (337)
Q Consensus 214 lvD 216 (337)
++.
T Consensus 116 ~~~ 118 (226)
T 3m33_A 116 VSR 118 (226)
T ss_dssp EEE
T ss_pred EeC
Confidence 976
No 239
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.70 E-value=3.5e-08 Score=88.93 Aligned_cols=100 Identities=15% Similarity=0.076 Sum_probs=73.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
++.+|||+|||+|..+..++.. ..+|+++|+++.+++.++++.. .+ ++.+|+.+++.. .++||+|++.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~l~~a~~~~~----~~--~~~~d~~~~~~~---~~~fD~v~~~ 121 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQER---GFEVVLVDPSKEMLEVAREKGV----KN--VVEAKAEDLPFP---SGAFEAVLAL 121 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTT---TCEEEEEESCHHHHHHHHHHTC----SC--EEECCTTSCCSC---TTCEEEEEEC
T ss_pred CCCeEEEeCCCcCHHHHHHHHc---CCeEEEEeCCHHHHHHHHhhcC----CC--EEECcHHHCCCC---CCCEEEEEEc
Confidence 7889999999999999988875 3689999999999999988754 22 788898877633 2579999964
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
... . .. ..-...+|+.+.+++++ |.++.++.+
T Consensus 122 ~~~-----~-~~-------------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 154 (260)
T 2avn_A 122 GDV-----L-SY-------------------------VENKDKAFSEIRRVLVPDGLLIATVDN 154 (260)
T ss_dssp SSH-----H-HH-------------------------CSCHHHHHHHHHHHEEEEEEEEEEEEB
T ss_pred chh-----h-hc-------------------------cccHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 321 0 00 00035678888888887 777776654
No 240
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.70 E-value=2.6e-08 Score=89.76 Aligned_cols=70 Identities=19% Similarity=0.187 Sum_probs=59.0
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++.. ..+|+++|+++.+++.+++++. ++.++++|+.+++. .++||+|++
T Consensus 49 ~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~~~-----~~~~~~~d~~~~~~----~~~fD~v~~ 116 (263)
T 3pfg_A 49 PKAASLLDVACGTGMHLRHLADS---FGTVEGLELSADMLAIARRRNP-----DAVLHHGDMRDFSL----GRRFSAVTC 116 (263)
T ss_dssp TTCCEEEEETCTTSHHHHHHTTT---SSEEEEEESCHHHHHHHHHHCT-----TSEEEECCTTTCCC----SCCEEEEEE
T ss_pred CCCCcEEEeCCcCCHHHHHHHHc---CCeEEEEECCHHHHHHHHhhCC-----CCEEEECChHHCCc----cCCcCEEEE
Confidence 45789999999999999988775 3589999999999999998753 68899999988765 267999997
Q ss_pred CC
Q 019692 216 DP 217 (337)
Q Consensus 216 Dp 217 (337)
..
T Consensus 117 ~~ 118 (263)
T 3pfg_A 117 MF 118 (263)
T ss_dssp CT
T ss_pred cC
Confidence 43
No 241
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=98.68 E-value=2.5e-08 Score=92.95 Aligned_cols=111 Identities=11% Similarity=0.034 Sum_probs=80.9
Q ss_pred CeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCC
Q 019692 139 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
.+|||+|||+|+.+..+++.. +..+|+++|+|+.+++.+++++....-.+++++.+|+..+..... .++||+|++|.+
T Consensus 91 ~rVLdIG~G~G~la~~la~~~-p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~-~~~fDvIi~D~~ 168 (317)
T 3gjy_A 91 LRITHLGGGACTMARYFADVY-PQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFT-PASRDVIIRDVF 168 (317)
T ss_dssp CEEEEESCGGGHHHHHHHHHS-TTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCC-TTCEEEEEECCS
T ss_pred CEEEEEECCcCHHHHHHHHHC-CCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhcc-CCCCCEEEECCC
Confidence 499999999999999999875 346999999999999999998765444579999999887642211 257999999976
Q ss_pred CCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 219 CSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 219 CSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
... +. +... ...+.++.+.+.|++ |.++..+.+
T Consensus 169 ~~~-~~----~~~L-----------------------~t~efl~~~~r~LkpgGvlv~~~~~ 202 (317)
T 3gjy_A 169 AGA-IT----PQNF-----------------------TTVEFFEHCHRGLAPGGLYVANCGD 202 (317)
T ss_dssp TTS-CC----CGGG-----------------------SBHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred Ccc-cc----chhh-----------------------hHHHHHHHHHHhcCCCcEEEEEecC
Confidence 331 11 1110 014667777777776 777766554
No 242
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=98.68 E-value=3.3e-08 Score=89.93 Aligned_cols=99 Identities=7% Similarity=-0.161 Sum_probs=76.9
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHH----hCCCcEEEEeccCCCCCCCCCCCCCcc
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKL----SGAANIEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~----~g~~~v~~~~~D~~~~~~~~~~~~~fD 211 (337)
..+.+|||+|||+|+.+..+++. + .+|+++|+|+.+++.+++++.. ..-++++++.+|+..+. ++||
T Consensus 71 ~~~~~VL~iG~G~G~~~~~ll~~--~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~------~~fD 141 (262)
T 2cmg_A 71 KELKEVLIVDGFDLELAHQLFKY--D-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI------KKYD 141 (262)
T ss_dssp SCCCEEEEESSCCHHHHHHHTTS--S-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC------CCEE
T ss_pred CCCCEEEEEeCCcCHHHHHHHhC--C-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH------hhCC
Confidence 34679999999999999888876 4 7999999999999999987643 22346999999998764 4699
Q ss_pred EEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 212 AILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 212 ~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
+|++|.+ .| ...++.+.+.+++ |.++..+++.
T Consensus 142 ~Ii~d~~---------dp----------------------------~~~~~~~~~~L~pgG~lv~~~~~~ 174 (262)
T 2cmg_A 142 LIFCLQE---------PD----------------------------IHRIDGLKRMLKEDGVFISVAKHP 174 (262)
T ss_dssp EEEESSC---------CC----------------------------HHHHHHHHTTEEEEEEEEEEEECT
T ss_pred EEEECCC---------Ch----------------------------HHHHHHHHHhcCCCcEEEEEcCCc
Confidence 9999953 11 1167788888887 7887765553
No 243
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=98.67 E-value=5e-08 Score=97.37 Aligned_cols=108 Identities=17% Similarity=0.216 Sum_probs=87.7
Q ss_pred hcCeEEEechhhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCC------------CCEEEEEeCCHHHHHHHHHHH
Q 019692 115 VNGCVFLQGKASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKG------------KGKIVACELNKERVRRLKDTI 182 (337)
Q Consensus 115 ~~G~~~~Qd~ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~------------~g~V~avD~~~~~l~~l~~~~ 182 (337)
+.|.|+--..-+.+++.++++++|++|+|-|||+|++.+.+...+.. ...++|+|+++.....++-|+
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la~mNl 274 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMDPQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLVQMNL 274 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHCCCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhccCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHHHHHH
Confidence 46888888888899999999999999999999999998877765532 246999999999999999999
Q ss_pred HHhCCCcEEEEeccCCCCCCCC-CCCCCccEEEECCCCCCc
Q 019692 183 KLSGAANIEVLHGDFLNLDPKD-PAYSEVRAILLDPSCSGS 222 (337)
Q Consensus 183 ~~~g~~~v~~~~~D~~~~~~~~-~~~~~fD~IlvDpPCSg~ 222 (337)
--.|+..-.+..+|....+... ....+||+|+.+||.++.
T Consensus 275 ~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~ 315 (530)
T 3ufb_A 275 LLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGE 315 (530)
T ss_dssp HHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCB
T ss_pred HhcCCccccccccccccCchhhhcccccceEEEecCCCCcc
Confidence 9889876677888876654221 112479999999998754
No 244
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.67 E-value=3.1e-08 Score=88.09 Aligned_cols=103 Identities=13% Similarity=0.056 Sum_probs=73.4
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
.+++.+|||+|||+|..+..++.. ..+|+++|+|+.+++.++++ +.++.+|+.+.....+ .++||+|+
T Consensus 39 ~~~~~~vLDiGcG~G~~~~~l~~~---~~~v~gvD~s~~~~~~a~~~--------~~~~~~d~~~~~~~~~-~~~fD~i~ 106 (240)
T 3dli_A 39 FKGCRRVLDIGCGRGEFLELCKEE---GIESIGVDINEDMIKFCEGK--------FNVVKSDAIEYLKSLP-DKYLDGVM 106 (240)
T ss_dssp TTTCSCEEEETCTTTHHHHHHHHH---TCCEEEECSCHHHHHHHHTT--------SEEECSCHHHHHHTSC-TTCBSEEE
T ss_pred hcCCCeEEEEeCCCCHHHHHHHhC---CCcEEEEECCHHHHHHHHhh--------cceeeccHHHHhhhcC-CCCeeEEE
Confidence 467899999999999999998886 35799999999999988876 6788888876421111 26799999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
+. +++..-++ . ....+|+.+.+++++ |.++.++..
T Consensus 107 ~~------~~l~~~~~-----------------~-------~~~~~l~~~~~~LkpgG~l~~~~~~ 142 (240)
T 3dli_A 107 IS------HFVEHLDP-----------------E-------RLFELLSLCYSKMKYSSYIVIESPN 142 (240)
T ss_dssp EE------SCGGGSCG-----------------G-------GHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred EC------CchhhCCc-----------------H-------HHHHHHHHHHHHcCCCcEEEEEeCC
Confidence 63 22221100 0 014678888887776 788777654
No 245
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.65 E-value=1.7e-07 Score=88.91 Aligned_cols=113 Identities=20% Similarity=0.143 Sum_probs=84.2
Q ss_pred HHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCC
Q 019692 129 VAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAY 207 (337)
Q Consensus 129 ~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~ 207 (337)
+...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+. +|+++.+|+.+..+
T Consensus 174 ~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~----- 246 (374)
T 1qzz_A 174 PADAYDWSAVRHVLDVGGGNGGMLAAIALRA-PHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPLP----- 246 (374)
T ss_dssp HHHTSCCTTCCEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-----
T ss_pred HHHhCCCCCCCEEEEECCCcCHHHHHHHHHC-CCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcCC-----
Confidence 3444566788999999999999999999885 4579999999 99999999999999886 69999999875221
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
..||+|++... +.. +.... ...+|+++.+.+++ |.++....
T Consensus 247 ~~~D~v~~~~v------l~~-----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~ 288 (374)
T 1qzz_A 247 VTADVVLLSFV------LLN-----------------WSDED-------ALTILRGCVRALEPGGRLLVLDR 288 (374)
T ss_dssp CCEEEEEEESC------GGG-----------------SCHHH-------HHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CCCCEEEEecc------ccC-----------------CCHHH-------HHHHHHHHHHhcCCCcEEEEEec
Confidence 24999997432 211 01111 24778888887777 66666554
No 246
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.65 E-value=2.1e-07 Score=86.72 Aligned_cols=115 Identities=17% Similarity=0.185 Sum_probs=85.1
Q ss_pred HHHhCC--CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCC
Q 019692 130 AAALAP--KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 130 ~~~l~~--~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~ 206 (337)
...++. .++.+|||+|||+|..+..+++.. +..+++++|++ .+++.+++++...|+. +|+++.+|+.+.+..
T Consensus 156 ~~~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~--- 230 (335)
T 2r3s_A 156 AQLVNENKIEPLKVLDISASHGLFGIAVAQHN-PNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYG--- 230 (335)
T ss_dssp HHHHTC--CCCSEEEEETCTTCHHHHHHHHHC-TTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCC---
T ss_pred HHhcccccCCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCC---
Confidence 334555 778999999999999999999886 45799999999 9999999999999886 499999999875422
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
..||+|++-- ++.. ++.+ ...++|+++.+.+++ |.++......
T Consensus 231 -~~~D~v~~~~------~l~~-----------------~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~ 274 (335)
T 2r3s_A 231 -NDYDLVLLPN------FLHH-----------------FDVA-------TCEQLLRKIKTALAVEGKVIVFDFIP 274 (335)
T ss_dssp -SCEEEEEEES------CGGG-----------------SCHH-------HHHHHHHHHHHHEEEEEEEEEEECCC
T ss_pred -CCCcEEEEcc------hhcc-----------------CCHH-------HHHHHHHHHHHhCCCCcEEEEEeecC
Confidence 3499999721 1111 1111 135678888887776 6666655444
No 247
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=98.65 E-value=2.5e-08 Score=90.12 Aligned_cols=71 Identities=15% Similarity=0.138 Sum_probs=59.5
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++..+ +...|+++|+++.+++.++++. .++.++.+|+.+++..+ ++||+|++
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~v~~vD~s~~~~~~a~~~~-----~~~~~~~~d~~~~~~~~---~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADAL-PEITTFGLDVSKVAIKAAAKRY-----PQVTFCVASSHRLPFSD---TSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTC-TTSEEEEEESCHHHHHHHHHHC-----TTSEEEECCTTSCSBCT---TCEEEEEE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhC-CCCeEEEEeCCHHHHHHHHHhC-----CCcEEEEcchhhCCCCC---CceeEEEE
Confidence 578999999999999999999876 3469999999999999988763 45789999988765332 57999996
No 248
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.62 E-value=5.5e-08 Score=89.31 Aligned_cols=112 Identities=14% Similarity=0.129 Sum_probs=73.4
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHc---CCCCEE--EEEeCCHHHHHHHHHHHHHh-CCCcEEE--EeccCCCCCC----
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALM---KGKGKI--VACELNKERVRRLKDTIKLS-GAANIEV--LHGDFLNLDP---- 202 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~---~~~g~V--~avD~~~~~l~~l~~~~~~~-g~~~v~~--~~~D~~~~~~---- 202 (337)
+.++.+|||+|||+|..+..++..+ .+...| +++|.|+.|++.++++++.. ++.++.+ ..+++.++..
T Consensus 50 ~~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~ 129 (292)
T 2aot_A 50 TKSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLE 129 (292)
T ss_dssp TCSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHT
T ss_pred CCCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhcc
Confidence 3567899999999998876554332 134544 99999999999999998764 5666654 4555544321
Q ss_pred CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 203 KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 203 ~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
.. ..++||+|++-- ++..-+| ....|++..++|++ |.++.++.+
T Consensus 130 ~~-~~~~fD~V~~~~------~l~~~~d--------------------------~~~~l~~~~r~LkpgG~l~i~~~~ 174 (292)
T 2aot_A 130 KK-ELQKWDFIHMIQ------MLYYVKD--------------------------IPATLKFFHSLLGTNAKMLIIVVS 174 (292)
T ss_dssp TT-CCCCEEEEEEES------CGGGCSC--------------------------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cc-CCCceeEEEEee------eeeecCC--------------------------HHHHHHHHHHHcCCCcEEEEEEec
Confidence 00 025799998521 1211111 24678888888887 777766433
No 249
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=98.61 E-value=1.6e-08 Score=91.53 Aligned_cols=91 Identities=12% Similarity=0.198 Sum_probs=68.4
Q ss_pred hhHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC
Q 019692 125 ASSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD 204 (337)
Q Consensus 125 ss~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~ 204 (337)
-...++..+++.+|++|||+|||+|..|. ++. ....+|+|+|+|+.+++.++++++.. .+++++++|+..++...
T Consensus 9 i~~~iv~~~~~~~~~~VLEIG~G~G~lt~-l~~--~~~~~v~avEid~~~~~~a~~~~~~~--~~v~~i~~D~~~~~~~~ 83 (252)
T 1qyr_A 9 VIDSIVSAINPQKGQAMVEIGPGLAALTE-PVG--ERLDQLTVIELDRDLAARLQTHPFLG--PKLTIYQQDAMTFNFGE 83 (252)
T ss_dssp HHHHHHHHHCCCTTCCEEEECCTTTTTHH-HHH--TTCSCEEEECCCHHHHHHHHTCTTTG--GGEEEECSCGGGCCHHH
T ss_pred HHHHHHHhcCCCCcCEEEEECCCCcHHHH-hhh--CCCCeEEEEECCHHHHHHHHHHhccC--CceEEEECchhhCCHHH
Confidence 34455666788899999999999999999 653 22233999999999999999887543 47999999998875321
Q ss_pred CC--CCCccEEEECCCCC
Q 019692 205 PA--YSEVRAILLDPSCS 220 (337)
Q Consensus 205 ~~--~~~fD~IlvDpPCS 220 (337)
.. ....|.|+.++|..
T Consensus 84 ~~~~~~~~~~vvsNlPY~ 101 (252)
T 1qyr_A 84 LAEKMGQPLRVFGNLPYN 101 (252)
T ss_dssp HHHHHTSCEEEEEECCTT
T ss_pred hhcccCCceEEEECCCCC
Confidence 00 01357999999964
No 250
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.61 E-value=1.1e-06 Score=83.40 Aligned_cols=112 Identities=12% Similarity=0.086 Sum_probs=82.0
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..+.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..|+ ++|+++.+|+.+.....+ +.||+|+
T Consensus 178 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p--~~~D~v~ 253 (363)
T 3dp7_A 178 HHPKRLLDIGGNTGKWATQCVQYN-KEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFP--TGFDAVW 253 (363)
T ss_dssp GCCSEEEEESCTTCHHHHHHHHHS-TTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCC--CCCSEEE
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCC--CCcCEEE
Confidence 456899999999999999999885 4579999999 9999999999998887 469999999987520111 4699998
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
+-- ++.. ++.++ ..++|+++.+.+++ |+|+.....+.
T Consensus 254 ~~~------vlh~-----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 291 (363)
T 3dp7_A 254 MSQ------FLDC-----------------FSEEE-------VISILTRVAQSIGKDSKVYIMETLWD 291 (363)
T ss_dssp EES------CSTT-----------------SCHHH-------HHHHHHHHHHHCCTTCEEEEEECCTT
T ss_pred Eec------hhhh-----------------CCHHH-------HHHHHHHHHHhcCCCcEEEEEeeccC
Confidence 521 2210 11211 24778888887776 77777654443
No 251
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.60 E-value=5.5e-08 Score=88.08 Aligned_cols=115 Identities=17% Similarity=0.055 Sum_probs=75.8
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC--C------------------------
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG--A------------------------ 187 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g--~------------------------ 187 (337)
...+|.+|||+|||+|..+..++.. +..+|+|+|+|+.+++.++++++... +
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~--~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~ 129 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACD--SFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEE 129 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGG--TEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHh--hhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHH
Confidence 4567899999999999776655443 22479999999999999998875431 0
Q ss_pred ---CcEE-EEeccCCCCCCCC-CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHH
Q 019692 188 ---ANIE-VLHGDFLNLDPKD-PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262 (337)
Q Consensus 188 ---~~v~-~~~~D~~~~~~~~-~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~ 262 (337)
.+|. ++.+|+.+..+.. ....+||+|++- . ++. .+.....-...+|.
T Consensus 130 ~~~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~----~--~l~----------------------~i~~~~~~~~~~l~ 181 (263)
T 2a14_A 130 KLRAAVKRVLKCDVHLGNPLAPAVLPLADCVLTL----L--AME----------------------CACCSLDAYRAALC 181 (263)
T ss_dssp HHHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEE----S--CHH----------------------HHCSSHHHHHHHHH
T ss_pred HHHhhhheEEeccccCCCCCCccccCCCCEeeeh----H--HHH----------------------HhcCCHHHHHHHHH
Confidence 1354 8899988743211 112579999952 1 110 00000011256899
Q ss_pred HHhCCCCC-cEEEEEcC
Q 019692 263 HALSFPGV-ERVVYSTC 278 (337)
Q Consensus 263 ~A~~~~~~-G~lvYsTC 278 (337)
+..++|++ |.++.++.
T Consensus 182 ~i~r~LKPGG~li~~~~ 198 (263)
T 2a14_A 182 NLASLLKPGGHLVTTVT 198 (263)
T ss_dssp HHHTTEEEEEEEEEEEE
T ss_pred HHHHHcCCCcEEEEEEe
Confidence 99999987 88888763
No 252
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=98.59 E-value=9.5e-08 Score=88.04 Aligned_cols=98 Identities=13% Similarity=0.030 Sum_probs=67.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEE-EeccCCCCCCCCCCCCCccEEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEV-LHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~-~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
+|.+|||+|||||+.|..+++. +.++|+|+|+++.|++.+.++ . .++.. ...|+..+.........||.|++
T Consensus 85 ~g~~vLDiGcGTG~~t~~L~~~--ga~~V~aVDvs~~mL~~a~r~----~-~rv~~~~~~ni~~l~~~~l~~~~fD~v~~ 157 (291)
T 3hp7_A 85 EDMITIDIGASTGGFTDVMLQN--GAKLVYAVDVGTNQLVWKLRQ----D-DRVRSMEQYNFRYAEPVDFTEGLPSFASI 157 (291)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSSSCSCHHHHT----C-TTEEEECSCCGGGCCGGGCTTCCCSEEEE
T ss_pred cccEEEecCCCccHHHHHHHhC--CCCEEEEEECCHHHHHHHHHh----C-cccceecccCceecchhhCCCCCCCEEEE
Confidence 5789999999999999988885 457999999999999874332 1 23332 23455444432211235999999
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEE
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYS 276 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYs 276 (337)
|...... ..+|....+++++ |.+|..
T Consensus 158 d~sf~sl-----------------------------------~~vL~e~~rvLkpGG~lv~l 184 (291)
T 3hp7_A 158 DVSFISL-----------------------------------NLILPALAKILVDGGQVVAL 184 (291)
T ss_dssp CCSSSCG-----------------------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred EeeHhhH-----------------------------------HHHHHHHHHHcCcCCEEEEE
Confidence 9753311 2467788887877 888875
No 253
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.58 E-value=3.8e-08 Score=88.30 Aligned_cols=138 Identities=14% Similarity=0.112 Sum_probs=89.5
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC---------------------------
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA--------------------------- 187 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~--------------------------- 187 (337)
..++.+|||+|||+|..+..++... ..+|+++|+++.+++.++++++..+.
T Consensus 54 ~~~~~~vLDlGcG~G~~~~~l~~~~--~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 131 (265)
T 2i62_A 54 AVKGELLIDIGSGPTIYQLLSACES--FTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEK 131 (265)
T ss_dssp SCCEEEEEEESCTTCCGGGTTGGGT--EEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHH
T ss_pred ccCCCEEEEECCCccHHHHHHhhcc--cCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHH
Confidence 3568899999999999888777642 24899999999999999998865431
Q ss_pred --CcE-EEEeccCCCCCC-CCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHH
Q 019692 188 --ANI-EVLHGDFLNLDP-KDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRH 263 (337)
Q Consensus 188 --~~v-~~~~~D~~~~~~-~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~ 263 (337)
.+| .++.+|+.+..+ .....++||+|++.- ++.. +.........+|.+
T Consensus 132 l~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~------~l~~----------------------~~~~~~~~~~~l~~ 183 (265)
T 2i62_A 132 LRRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTL------CLDA----------------------ACPDLPAYRTALRN 183 (265)
T ss_dssp HHHHEEEEEECCTTSSSTTTTCCCCCEEEEEEES------CHHH----------------------HCSSHHHHHHHHHH
T ss_pred hhhhheeEEEeeeccCCCCCccccCCccEEEEhh------hhhh----------------------hcCChHHHHHHHHH
Confidence 127 899999987654 111125799999631 1110 00001224678899
Q ss_pred HhCCCCC-cEEEEEcCCC------------CcccCHHHHHHHhchhcCCCcEEec
Q 019692 264 ALSFPGV-ERVVYSTCSI------------HQVENEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 264 A~~~~~~-G~lvYsTCS~------------~~~ENe~vv~~~l~~~~~~~~~~~~ 305 (337)
+.+++++ |.++.++..- ...-+++.+...|+ ..||+++.
T Consensus 184 ~~~~LkpgG~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~---~aGf~~~~ 235 (265)
T 2i62_A 184 LGSLLKPGGFLVMVDALKSSYYMIGEQKFSSLPLGWETVRDAVE---EAGYTIEQ 235 (265)
T ss_dssp HHTTEEEEEEEEEEEESSCCEEEETTEEEECCCCCHHHHHHHHH---HTTCEEEE
T ss_pred HHhhCCCCcEEEEEecCCCceEEcCCccccccccCHHHHHHHHH---HCCCEEEE
Confidence 9999887 7777665221 11124556666663 34677653
No 254
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.58 E-value=3.1e-07 Score=86.68 Aligned_cols=113 Identities=19% Similarity=0.170 Sum_probs=84.2
Q ss_pred HHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCC
Q 019692 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYS 208 (337)
Q Consensus 130 ~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~ 208 (337)
...++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..|+. +|+++.+|+.+..+ .
T Consensus 176 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-----~ 248 (360)
T 1tw3_A 176 AAAYDWTNVRHVLDVGGGKGGFAAAIARRA-PHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP-----R 248 (360)
T ss_dssp HHHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-----S
T ss_pred HHhCCCccCcEEEEeCCcCcHHHHHHHHhC-CCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC-----C
Confidence 344566778999999999999999999885 4578999999 99999999999999886 69999999875221 2
Q ss_pred CccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 209 ~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
.||+|++.-. +.. +... ...++|+++.+.+++ |.++.+...
T Consensus 249 ~~D~v~~~~v------l~~-----------------~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~ 290 (360)
T 1tw3_A 249 KADAIILSFV------LLN-----------------WPDH-------DAVRILTRCAEALEPGGRILIHERD 290 (360)
T ss_dssp CEEEEEEESC------GGG-----------------SCHH-------HHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred CccEEEEccc------ccC-----------------CCHH-------HHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 4999997432 211 0111 125788888888887 667666544
No 255
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.57 E-value=1.4e-07 Score=82.30 Aligned_cols=99 Identities=15% Similarity=0.175 Sum_probs=72.2
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..++.. + .+|+++|+++.+++.++++. ..++.+|+.+.....+ .++||+|++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~--~-~~~~~~D~~~~~~~~~~~~~-------~~~~~~d~~~~~~~~~-~~~fD~v~~ 99 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKEN--G-TRVSGIEAFPEAAEQAKEKL-------DHVVLGDIETMDMPYE-EEQFDCVIF 99 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTT--T-CEEEEEESSHHHHHHHHTTS-------SEEEESCTTTCCCCSC-TTCEEEEEE
T ss_pred cCCCcEEEeCCCCCHHHHHHHhc--C-CeEEEEeCCHHHHHHHHHhC-------CcEEEcchhhcCCCCC-CCccCEEEE
Confidence 67899999999999999998886 3 79999999999999887654 2578888876432221 257999997
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
.- ++..-++ ...+|..+.+++++ |.++.++
T Consensus 100 ~~------~l~~~~~--------------------------~~~~l~~~~~~L~~gG~l~~~~ 130 (230)
T 3cc8_A 100 GD------VLEHLFD--------------------------PWAVIEKVKPYIKQNGVILASI 130 (230)
T ss_dssp ES------CGGGSSC--------------------------HHHHHHHTGGGEEEEEEEEEEE
T ss_pred CC------hhhhcCC--------------------------HHHHHHHHHHHcCCCCEEEEEe
Confidence 42 2211100 13778888888887 7777665
No 256
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.55 E-value=2.1e-06 Score=81.59 Aligned_cols=114 Identities=15% Similarity=0.112 Sum_probs=84.8
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCC
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSE 209 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~ 209 (337)
..++..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+ ++|+++.+|+.... + ..
T Consensus 196 ~~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~---p--~~ 268 (369)
T 3gwz_A 196 AAYDFSGAATAVDIGGGRGSLMAAVLDAF-PGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI---P--DG 268 (369)
T ss_dssp HHSCCTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC---C--SS
T ss_pred HhCCCccCcEEEEeCCCccHHHHHHHHHC-CCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC---C--CC
Confidence 34556778999999999999999999985 4579999999 9999999999999887 46999999997321 1 26
Q ss_pred ccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 210 fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
||+|++-- ++.. ++.. ...++|+++.+.+++ |+++.......
T Consensus 269 ~D~v~~~~------vlh~-----------------~~d~-------~~~~~L~~~~~~L~pgG~l~i~e~~~~ 311 (369)
T 3gwz_A 269 ADVYLIKH------VLHD-----------------WDDD-------DVVRILRRIATAMKPDSRLLVIDNLID 311 (369)
T ss_dssp CSEEEEES------CGGG-----------------SCHH-------HHHHHHHHHHTTCCTTCEEEEEEEBCC
T ss_pred ceEEEhhh------hhcc-----------------CCHH-------HHHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 99998632 2211 1111 124789999998887 77766554443
No 257
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.54 E-value=4.1e-07 Score=85.57 Aligned_cols=113 Identities=12% Similarity=0.120 Sum_probs=83.7
Q ss_pred hCCCC-CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCCCCCCCc
Q 019692 133 LAPKP-GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 133 l~~~~-g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~~~~~~f 210 (337)
++..+ +.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++++..++. +|+++.+|+.+.+... ...|
T Consensus 174 ~~~~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~--~~~~ 249 (352)
T 3mcz_A 174 LGVFARARTVIDLAGGHGTYLAQVLRRH-PQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFE--GGAA 249 (352)
T ss_dssp CGGGTTCCEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGT--TCCE
T ss_pred CCCcCCCCEEEEeCCCcCHHHHHHHHhC-CCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccC--CCCc
Confidence 34455 7899999999999999999875 4579999999 88999999999998885 4999999998764211 1459
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
|+|++-- ++.. ++.++ ...+|+++.+.+++ |.++.....
T Consensus 250 D~v~~~~------vlh~-----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~ 289 (352)
T 3mcz_A 250 DVVMLND------CLHY-----------------FDARE-------AREVIGHAAGLVKPGGALLILTMT 289 (352)
T ss_dssp EEEEEES------CGGG-----------------SCHHH-------HHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cEEEEec------cccc-----------------CCHHH-------HHHHHHHHHHHcCCCCEEEEEEec
Confidence 9999721 2211 11211 35788888888887 666665443
No 258
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.51 E-value=9.7e-07 Score=82.41 Aligned_cols=109 Identities=14% Similarity=0.077 Sum_probs=80.7
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+ ++|+++.+|+.+.. + ..||+|
T Consensus 167 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---p--~~~D~v 239 (332)
T 3i53_A 167 WAALGHVVDVGGGSGGLLSALLTAH-EDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDPL---P--AGAGGY 239 (332)
T ss_dssp CGGGSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC---C--CSCSEE
T ss_pred CCCCCEEEEeCCChhHHHHHHHHHC-CCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCCC---C--CCCcEE
Confidence 3457899999999999999999875 4578999999 9999999999999887 46999999987321 1 269999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
++- . ++.. ++.+ .+.++|+++.+.+++ |.|+......
T Consensus 240 ~~~----~--vlh~-----------------~~~~-------~~~~~l~~~~~~L~pgG~l~i~e~~~ 277 (332)
T 3i53_A 240 VLS----A--VLHD-----------------WDDL-------SAVAILRRCAEAAGSGGVVLVIEAVA 277 (332)
T ss_dssp EEE----S--CGGG-----------------SCHH-------HHHHHHHHHHHHHTTTCEEEEEECCC
T ss_pred EEe----h--hhcc-----------------CCHH-------HHHHHHHHHHHhcCCCCEEEEEeecC
Confidence 952 1 2211 1111 135788888887776 7776655443
No 259
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=98.50 E-value=1.1e-07 Score=95.83 Aligned_cols=75 Identities=17% Similarity=0.112 Sum_probs=63.7
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.+-+|||+|||.|..+..||+. +..|+|+|.++.+++.|+..++..|.-+|.+.+++++++..... .++||+|++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~---ga~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~-~~~fD~v~~ 140 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASK---GATIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALE-EGEFDLAIG 140 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCC-TTSCSEEEE
T ss_pred CCCeEEEECCCCcHHHHHHHhC---CCEEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhcc-CCCccEEEE
Confidence 4679999999999999999986 47999999999999999999998886689999999987632211 257999994
No 260
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=98.47 E-value=7.4e-07 Score=79.59 Aligned_cols=71 Identities=13% Similarity=0.147 Sum_probs=60.5
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.+..+|||+|||.|-.++.+. +...++|+|+|+.+++.+++++..+| .+..+...|....++. .+||+|++
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~----~~~~y~a~DId~~~i~~ar~~~~~~g-~~~~~~v~D~~~~~~~----~~~DvvLl 174 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER----GIASVWGCDIHQGLGDVITPFAREKD-WDFTFALQDVLCAPPA----EAGDLALI 174 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT----TCSEEEEEESBHHHHHHHHHHHHHTT-CEEEEEECCTTTSCCC----CBCSEEEE
T ss_pred CCCCeEEEecCCccHHHHHhc----cCCeEEEEeCCHHHHHHHHHHHHhcC-CCceEEEeecccCCCC----CCcchHHH
Confidence 457899999999998887665 56899999999999999999999998 4588999998776644 47999975
No 261
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=98.45 E-value=4.8e-07 Score=81.62 Aligned_cols=74 Identities=11% Similarity=0.068 Sum_probs=62.6
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.+..+|||+|||.|-.++.++.. .+..+++|+|+|+.+++.+++|+..+|+. .++...|...-++. .+||+||+
T Consensus 131 ~~p~~VLDLGCG~GpLAl~~~~~-~p~a~y~a~DId~~~le~a~~~l~~~g~~-~~~~v~D~~~~~p~----~~~DvaL~ 204 (281)
T 3lcv_B 131 PRPNTLRDLACGLNPLAAPWMGL-PAETVYIASDIDARLVGFVDEALTRLNVP-HRTNVADLLEDRLD----EPADVTLL 204 (281)
T ss_dssp CCCSEEEETTCTTGGGCCTTTTC-CTTCEEEEEESBHHHHHHHHHHHHHTTCC-EEEEECCTTTSCCC----SCCSEEEE
T ss_pred CCCceeeeeccCccHHHHHHHhh-CCCCEEEEEeCCHHHHHHHHHHHHhcCCC-ceEEEeeecccCCC----CCcchHHH
Confidence 34679999999999998887765 36689999999999999999999999987 78888887765543 57999985
No 262
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.44 E-value=3.2e-06 Score=77.11 Aligned_cols=111 Identities=11% Similarity=0.028 Sum_probs=76.3
Q ss_pred CCCeEEeecCCc---hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC--------CCC
Q 019692 137 PGWKVLDACSAP---GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP--------KDP 205 (337)
Q Consensus 137 ~g~~VLDl~aG~---G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~--------~~~ 205 (337)
+..+|||+|||+ |..+..+++. .+..+|+++|+|+.+++.+++++.. ..+++++.+|+.+... ...
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~-~p~~~v~~vD~sp~~l~~Ar~~~~~--~~~v~~~~~D~~~~~~~~~~~~~~~~~ 153 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSV-NPDARVVYVDIDPMVLTHGRALLAK--DPNTAVFTADVRDPEYILNHPDVRRMI 153 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHH-CTTCEEEEEESSHHHHHHHHHHHTT--CTTEEEEECCTTCHHHHHHSHHHHHHC
T ss_pred CCCEEEEECCCCCCCChHHHHHHHh-CCCCEEEEEECChHHHHHHHHhcCC--CCCeEEEEeeCCCchhhhccchhhccC
Confidence 457999999999 9876555554 4558999999999999999998843 3579999999976421 000
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
.+.+||.|++.. ++..-+|. ....+|++..+.+++ |.|+.++.+.
T Consensus 154 d~~~~d~v~~~~------vlh~~~d~------------------------~~~~~l~~~~~~L~pGG~l~i~~~~~ 199 (274)
T 2qe6_A 154 DFSRPAAIMLVG------MLHYLSPD------------------------VVDRVVGAYRDALAPGSYLFMTSLVD 199 (274)
T ss_dssp CTTSCCEEEETT------TGGGSCTT------------------------THHHHHHHHHHHSCTTCEEEEEEEBC
T ss_pred CCCCCEEEEEec------hhhhCCcH------------------------HHHHHHHHHHHhCCCCcEEEEEEecC
Confidence 124789998532 22211110 025688888887776 7888776554
No 263
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.44 E-value=1.1e-06 Score=81.97 Aligned_cols=111 Identities=17% Similarity=0.142 Sum_probs=81.6
Q ss_pred HhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCCCc
Q 019692 132 ALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYSEV 210 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~~f 210 (337)
.++..+ .+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++++...|+ ++|+++.+|+.+.. + ..|
T Consensus 163 ~~~~~~-~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~---~--~~~ 234 (334)
T 2ip2_A 163 LLDFRG-RSFVDVGGGSGELTKAILQAE-PSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQEV---P--SNG 234 (334)
T ss_dssp HSCCTT-CEEEEETCTTCHHHHHHHHHC-TTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTTCC---C--SSC
T ss_pred hCCCCC-CEEEEeCCCchHHHHHHHHHC-CCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCCCC---C--CCC
Confidence 345555 899999999999999999885 4579999999 9999999999988776 46999999987621 1 469
Q ss_pred cEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 211 RAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 211 D~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
|+|++.- ++.. ++.+. ..++|+++.+.+++ |.++......
T Consensus 235 D~v~~~~------vl~~-----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~ 275 (334)
T 2ip2_A 235 DIYLLSR------IIGD-----------------LDEAA-------SLRLLGNCREAMAGDGRVVVIERTI 275 (334)
T ss_dssp SEEEEES------CGGG-----------------CCHHH-------HHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred CEEEEch------hccC-----------------CCHHH-------HHHHHHHHHHhcCCCCEEEEEEecc
Confidence 9999532 1211 11111 25788888887776 7777665443
No 264
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.44 E-value=4.5e-07 Score=79.06 Aligned_cols=79 Identities=18% Similarity=0.269 Sum_probs=62.8
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeccCCCCC-----------
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA---ANIEVLHGDFLNLD----------- 201 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~---~~v~~~~~D~~~~~----------- 201 (337)
++..+||++|| |+.|+.+|+.. +++|+++|.+++..+.+++++++.|+ ++|+++.+|+....
T Consensus 29 ~~a~~VLEiGt--GySTl~lA~~~--~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda~~~~~wg~p~~~~~~ 104 (202)
T 3cvo_A 29 EEAEVILEYGS--GGSTVVAAELP--GKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDIGPTGDWGHPVSDAKW 104 (202)
T ss_dssp HHCSEEEEESC--SHHHHHHHTST--TCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCCSSBCGGGCBSSSTTG
T ss_pred hCCCEEEEECc--hHHHHHHHHcC--CCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCchhhhcccccccchhh
Confidence 45789999998 57888888742 58999999999999999999999995 56999999976531
Q ss_pred ---C-------CCCCCCCccEEEECCC
Q 019692 202 ---P-------KDPAYSEVRAILLDPS 218 (337)
Q Consensus 202 ---~-------~~~~~~~fD~IlvDpP 218 (337)
+ .....++||+||+|+.
T Consensus 105 ~~l~~~~~~i~~~~~~~~fDlIfIDg~ 131 (202)
T 3cvo_A 105 RSYPDYPLAVWRTEGFRHPDVVLVDGR 131 (202)
T ss_dssp GGTTHHHHGGGGCTTCCCCSEEEECSS
T ss_pred hhHHHHhhhhhccccCCCCCEEEEeCC
Confidence 0 0111367999999975
No 265
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=98.43 E-value=8.4e-07 Score=81.07 Aligned_cols=111 Identities=17% Similarity=0.089 Sum_probs=70.5
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh-----------------CC-----------
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-----------------GA----------- 187 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~-----------------g~----------- 187 (337)
.++.+|||+|||+|..+ .++... ...+|+|+|+|+.+++.+++++++. |.
T Consensus 70 ~~~~~vLDiGcG~G~~~-~l~~~~-~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~ 147 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQ-LLSACS-HFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQL 147 (289)
T ss_dssp SCCSEEEEETCTTCCGG-GTTGGG-GCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHH
T ss_pred CCCCeEEEECCCcChHH-HHhhcc-CCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHH
Confidence 36889999999999943 333322 2469999999999999998865421 10
Q ss_pred --CcEEEEeccCCC-CCCCC--CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHH
Q 019692 188 --ANIEVLHGDFLN-LDPKD--PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALR 262 (337)
Q Consensus 188 --~~v~~~~~D~~~-~~~~~--~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~ 262 (337)
..+.++.+|+.+ .+... ...++||+|++.- ++..-++ + ..-...+|+
T Consensus 148 ~~~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~------~l~~~~~---------------~-------~~~~~~~l~ 199 (289)
T 2g72_A 148 RARVKRVLPIDVHQPQPLGAGSPAPLPADALVSAF------CLEAVSP---------------D-------LASFQRALD 199 (289)
T ss_dssp HHHEEEEECCCTTSSSTTCSSCSSCSSEEEEEEES------CHHHHCS---------------S-------HHHHHHHHH
T ss_pred HhhhceEEecccCCCCCccccccCCCCCCEEEehh------hhhhhcC---------------C-------HHHHHHHHH
Confidence 026678889887 33221 1124699999642 1110000 0 112357899
Q ss_pred HHhCCCCC-cEEEEE
Q 019692 263 HALSFPGV-ERVVYS 276 (337)
Q Consensus 263 ~A~~~~~~-G~lvYs 276 (337)
++.+++++ |.++.+
T Consensus 200 ~~~r~LkpGG~l~~~ 214 (289)
T 2g72_A 200 HITTLLRPGGHLLLI 214 (289)
T ss_dssp HHHTTEEEEEEEEEE
T ss_pred HHHHhcCCCCEEEEE
Confidence 99999987 777665
No 266
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=98.42 E-value=1e-06 Score=80.51 Aligned_cols=107 Identities=16% Similarity=0.180 Sum_probs=73.0
Q ss_pred CCCeEEeecCCchh----HHHHHHHHcCC---CCEEEEEeCCHHHHHHHHHHHH--------------Hh---------C
Q 019692 137 PGWKVLDACSAPGN----KTVHLAALMKG---KGKIVACELNKERVRRLKDTIK--------------LS---------G 186 (337)
Q Consensus 137 ~g~~VLDl~aG~G~----kt~~la~~~~~---~g~V~avD~~~~~l~~l~~~~~--------------~~---------g 186 (337)
++.+|||+|||+|- .+..+++.++. ..+|+|+|+|+.+++.|++++- ++ |
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 35799999999998 55556666442 2489999999999999998741 11 1
Q ss_pred ---C-----CcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHH
Q 019692 187 ---A-----ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQK 258 (337)
Q Consensus 187 ---~-----~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~ 258 (337)
+ .+|.+.++|..+.+... .++||+|+| .. ++. +.++ ..|.
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~--~~~fDlI~c----rn--vli-----------------yf~~-------~~~~ 232 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNV--PGPFDAIFC----RN--VMI-----------------YFDK-------TTQE 232 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCC--CCCEEEEEE----CS--SGG-----------------GSCH-------HHHH
T ss_pred ceeechhhcccCeEEecccCCCCCCc--CCCeeEEEE----CC--chH-----------------hCCH-------HHHH
Confidence 1 25999999988743221 257999997 21 111 0112 2378
Q ss_pred HHHHHHhCCCCC-cEEEE
Q 019692 259 KALRHALSFPGV-ERVVY 275 (337)
Q Consensus 259 ~lL~~A~~~~~~-G~lvY 275 (337)
+++....+.+++ |.|+.
T Consensus 233 ~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 233 DILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp HHHHHHGGGEEEEEEEEE
T ss_pred HHHHHHHHHhCCCcEEEE
Confidence 999999998888 55543
No 267
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.40 E-value=3e-07 Score=80.55 Aligned_cols=94 Identities=17% Similarity=0.146 Sum_probs=68.5
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEEC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
++.+|||+|||+|..+..++.. +++|+++.+++.++++ ++.++.+|+.+++.. .++||+|++.
T Consensus 47 ~~~~vLDiG~G~G~~~~~l~~~-------~~vD~s~~~~~~a~~~-------~~~~~~~d~~~~~~~---~~~fD~v~~~ 109 (219)
T 1vlm_A 47 PEGRGVEIGVGTGRFAVPLKIK-------IGVEPSERMAEIARKR-------GVFVLKGTAENLPLK---DESFDFALMV 109 (219)
T ss_dssp CSSCEEEETCTTSTTHHHHTCC-------EEEESCHHHHHHHHHT-------TCEEEECBTTBCCSC---TTCEEEEEEE
T ss_pred CCCcEEEeCCCCCHHHHHHHHH-------hccCCCHHHHHHHHhc-------CCEEEEcccccCCCC---CCCeeEEEEc
Confidence 3889999999999988766432 9999999999998877 578899998876533 2579999975
Q ss_pred CCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 217 PSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 217 pPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
-. +..-++ ...+|+.+.+++++ |.++.++..
T Consensus 110 ~~------l~~~~~--------------------------~~~~l~~~~~~L~pgG~l~i~~~~ 141 (219)
T 1vlm_A 110 TT------ICFVDD--------------------------PERALKEAYRILKKGGYLIVGIVD 141 (219)
T ss_dssp SC------GGGSSC--------------------------HHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred ch------HhhccC--------------------------HHHHHHHHHHHcCCCcEEEEEEeC
Confidence 32 211100 14677888787776 777776543
No 268
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.40 E-value=2e-07 Score=89.28 Aligned_cols=100 Identities=14% Similarity=0.138 Sum_probs=72.1
Q ss_pred CCCeEEeecCC------chhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC---CCC
Q 019692 137 PGWKVLDACSA------PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD---PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG------~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~---~~~ 207 (337)
++.+|||+||| +|+.++.++....+.++|+++|+++.+. ....+|+++++|+.+++... ...
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~---------~~~~rI~fv~GDa~dlpf~~~l~~~d 286 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH---------VDELRIRTIQGDQNDAEFLDRIARRY 286 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG---------GCBTTEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh---------hcCCCcEEEEecccccchhhhhhccc
Confidence 57899999999 7888888887655678999999999872 13467999999998864320 001
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcC
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTC 278 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTC 278 (337)
++||+|++|.- . . . .-+...|+.+.++|++ |.++.+..
T Consensus 287 ~sFDlVisdgs------H--~------------------~-------~d~~~aL~el~rvLKPGGvlVi~Dl 325 (419)
T 3sso_A 287 GPFDIVIDDGS------H--I------------------N-------AHVRTSFAALFPHVRPGGLYVIEDM 325 (419)
T ss_dssp CCEEEEEECSC------C--C------------------H-------HHHHHHHHHHGGGEEEEEEEEEECG
T ss_pred CCccEEEECCc------c--c------------------c-------hhHHHHHHHHHHhcCCCeEEEEEec
Confidence 57999997631 0 0 0 1245778899998887 77777643
No 269
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.39 E-value=2.8e-07 Score=82.16 Aligned_cols=98 Identities=16% Similarity=0.050 Sum_probs=64.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-eccCCCCCCCCCCCCCccEEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVL-HGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~-~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
+|.+|||+|||+|+.+..+++. +..+|+|+|+++.+++.++++..+ +... ..++......+.....||.+.+
T Consensus 37 ~g~~VLDiGcGtG~~t~~la~~--g~~~V~gvDis~~ml~~a~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~d~~~~ 109 (232)
T 3opn_A 37 NGKTCLDIGSSTGGFTDVMLQN--GAKLVYALDVGTNQLAWKIRSDER-----VVVMEQFNFRNAVLADFEQGRPSFTSI 109 (232)
T ss_dssp TTCEEEEETCTTSHHHHHHHHT--TCSEEEEECSSCCCCCHHHHTCTT-----EEEECSCCGGGCCGGGCCSCCCSEEEE
T ss_pred CCCEEEEEccCCCHHHHHHHhc--CCCEEEEEcCCHHHHHHHHHhCcc-----ccccccceEEEeCHhHcCcCCCCEEEE
Confidence 4779999999999999999886 345999999999999986665322 2221 1222222211111113677888
Q ss_pred CCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEE
Q 019692 216 DPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYS 276 (337)
Q Consensus 216 DpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYs 276 (337)
|...+.. ..+|..+.+++++ |.++..
T Consensus 110 D~v~~~l-----------------------------------~~~l~~i~rvLkpgG~lv~~ 136 (232)
T 3opn_A 110 DVSFISL-----------------------------------DLILPPLYEILEKNGEVAAL 136 (232)
T ss_dssp CCSSSCG-----------------------------------GGTHHHHHHHSCTTCEEEEE
T ss_pred EEEhhhH-----------------------------------HHHHHHHHHhccCCCEEEEE
Confidence 8764432 2467888888887 777764
No 270
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=98.35 E-value=1.1e-07 Score=85.15 Aligned_cols=77 Identities=18% Similarity=0.125 Sum_probs=52.9
Q ss_pred CCCCCeEEeecCCchhHHHHHHHH--cCC-CCEEEEEeC--CHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAAL--MKG-KGKIVACEL--NKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYS 208 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~--~~~-~g~V~avD~--~~~~l~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~ 208 (337)
++||++|+|+|||||+++..+++. ++. .|.|+|+|. .+-... ..|++-+.+..+ |+.++.. .
T Consensus 71 ikpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~~~~P~~~~-------~~Gv~~i~~~~G~Df~~~~~-----~ 138 (269)
T 2px2_A 71 VQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPGHEEPMLMQ-------SYGWNIVTMKSGVDVFYKPS-----E 138 (269)
T ss_dssp CCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTTSCCCCCCC-------STTGGGEEEECSCCGGGSCC-----C
T ss_pred CCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEccccccCCCccc-------CCCceEEEeeccCCccCCCC-----C
Confidence 578999999999999999999887 432 467777773 221100 023333567767 9987542 4
Q ss_pred CccEEEECCCCCCccc
Q 019692 209 EVRAILLDPSCSGSGT 224 (337)
Q Consensus 209 ~fD~IlvDpPCSg~G~ 224 (337)
++|+|++|.--+ +|.
T Consensus 139 ~~DvVLSDMAPn-SG~ 153 (269)
T 2px2_A 139 ISDTLLCDIGES-SPS 153 (269)
T ss_dssp CCSEEEECCCCC-CSC
T ss_pred CCCEEEeCCCCC-CCc
Confidence 699999997555 663
No 271
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.34 E-value=5.9e-07 Score=78.16 Aligned_cols=117 Identities=11% Similarity=0.073 Sum_probs=78.3
Q ss_pred HHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC
Q 019692 128 MVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY 207 (337)
Q Consensus 128 l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~ 207 (337)
+...+....++.+|||+|||+|..+..++ .+|+++|+++. ++.++.+|+.+++.. .
T Consensus 58 ~~~~l~~~~~~~~vLDiG~G~G~~~~~l~------~~v~~~D~s~~---------------~~~~~~~d~~~~~~~---~ 113 (215)
T 2zfu_A 58 IARDLRQRPASLVVADFGCGDCRLASSIR------NPVHCFDLASL---------------DPRVTVCDMAQVPLE---D 113 (215)
T ss_dssp HHHHHHTSCTTSCEEEETCTTCHHHHHCC------SCEEEEESSCS---------------STTEEESCTTSCSCC---T
T ss_pred HHHHHhccCCCCeEEEECCcCCHHHHHhh------ccEEEEeCCCC---------------CceEEEeccccCCCC---C
Confidence 34444445678999999999998877652 68999999987 456788998876533 2
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCH
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENE 286 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe 286 (337)
++||+|++... +. .++ ...+|..+.+++++ |.++.+++.. ...+.
T Consensus 114 ~~fD~v~~~~~------l~-~~~--------------------------~~~~l~~~~~~L~~gG~l~i~~~~~-~~~~~ 159 (215)
T 2zfu_A 114 ESVDVAVFCLS------LM-GTN--------------------------IRDFLEEANRVLKPGGLLKVAEVSS-RFEDV 159 (215)
T ss_dssp TCEEEEEEESC------CC-SSC--------------------------HHHHHHHHHHHEEEEEEEEEEECGG-GCSCH
T ss_pred CCEeEEEEehh------cc-ccC--------------------------HHHHHHHHHHhCCCCeEEEEEEcCC-CCCCH
Confidence 57999997432 21 111 14677788787776 7777766543 22355
Q ss_pred HHHHHHhchhcCCCcEEec
Q 019692 287 DVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 287 ~vv~~~l~~~~~~~~~~~~ 305 (337)
+.+...++ ..||+++.
T Consensus 160 ~~~~~~l~---~~Gf~~~~ 175 (215)
T 2zfu_A 160 RTFLRAVT---KLGFKIVS 175 (215)
T ss_dssp HHHHHHHH---HTTEEEEE
T ss_pred HHHHHHHH---HCCCEEEE
Confidence 66666664 35777653
No 272
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.34 E-value=1.3e-06 Score=82.59 Aligned_cols=73 Identities=15% Similarity=0.174 Sum_probs=57.1
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+++|++|||+||+|||+|..+++. +++|+|||+.+- ...+ ....+|+++.+|+....+.. .+||.|+
T Consensus 209 l~~G~~vlDLGAaPGGWT~~l~~r---g~~V~aVD~~~l-----~~~l--~~~~~V~~~~~d~~~~~~~~---~~~D~vv 275 (375)
T 4auk_A 209 LANGMWAVDLGACPGGWTYQLVKR---NMWVYSVDNGPM-----AQSL--MDTGQVTWLREDGFKFRPTR---SNISWMV 275 (375)
T ss_dssp SCTTCEEEEETCTTCHHHHHHHHT---TCEEEEECSSCC-----CHHH--HTTTCEEEECSCTTTCCCCS---SCEEEEE
T ss_pred CCCCCEEEEeCcCCCHHHHHHHHC---CCEEEEEEhhhc-----Chhh--ccCCCeEEEeCccccccCCC---CCcCEEE
Confidence 578999999999999999998875 479999998631 1112 12357999999998876543 5799999
Q ss_pred ECCCCC
Q 019692 215 LDPSCS 220 (337)
Q Consensus 215 vDpPCS 220 (337)
+|.-+.
T Consensus 276 sDm~~~ 281 (375)
T 4auk_A 276 CDMVEK 281 (375)
T ss_dssp ECCSSC
T ss_pred EcCCCC
Confidence 998754
No 273
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=98.29 E-value=1.2e-06 Score=79.31 Aligned_cols=130 Identities=15% Similarity=0.158 Sum_probs=84.4
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHc------CCC-----CEEEEEeCCH---HHHH-----------HHHHHHHH-----
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALM------KGK-----GKIVACELNK---ERVR-----------RLKDTIKL----- 184 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~------~~~-----g~V~avD~~~---~~l~-----------~l~~~~~~----- 184 (337)
.+++.+|||+|+|+|..++.+++.. .+. ..++++|.++ +.+. .++++++.
T Consensus 58 ~~~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~ 137 (257)
T 2qy6_A 58 PHPLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPL 137 (257)
T ss_dssp SSSEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSC
T ss_pred CCCCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccc
Confidence 3456799999999999998887764 442 4899999887 4444 45555554
Q ss_pred -------h--CCCcEEEEeccCCCCCCCCCC--CCCccEEEECC--CCCCccccCcccCccCCCCCCCCCCCcccHHHHH
Q 019692 185 -------S--GAANIEVLHGDFLNLDPKDPA--YSEVRAILLDP--SCSGSGTAAERLDHLLPSHASGHTADPTEMERLN 251 (337)
Q Consensus 185 -------~--g~~~v~~~~~D~~~~~~~~~~--~~~fD~IlvDp--PCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 251 (337)
+ +..+++++.+|+.+..+.... ...||+|++|+ |+ ++|+. |
T Consensus 138 ~g~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~fsp~-------~~p~l-------------w------ 191 (257)
T 2qy6_A 138 PGCHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDGFAPA-------KNPDM-------------W------ 191 (257)
T ss_dssp SEEEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECSSCTT-------TCGGG-------------C------
T ss_pred cchhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECCCCcc-------cChhh-------------c------
Confidence 1 223688999998875433211 12699999998 42 34442 1
Q ss_pred HHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEec
Q 019692 252 KLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 252 ~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~~ 305 (337)
+.+++....+++++ |.++--|+ ...|.+-|.. .||++..
T Consensus 192 -----~~~~l~~l~~~L~pGG~l~tysa-------a~~vrr~L~~---aGF~v~~ 231 (257)
T 2qy6_A 192 -----TQNLFNAMARLARPGGTLATFTS-------AGFVRRGLQE---AGFTMQK 231 (257)
T ss_dssp -----CHHHHHHHHHHEEEEEEEEESCC-------BHHHHHHHHH---HTEEEEE
T ss_pred -----CHHHHHHHHHHcCCCcEEEEEeC-------CHHHHHHHHH---CCCEEEe
Confidence 24677777777777 66552222 1467777743 4788754
No 274
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.22 E-value=3.3e-07 Score=88.35 Aligned_cols=105 Identities=9% Similarity=0.005 Sum_probs=70.4
Q ss_pred HHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEE--EEeccCCCCCCCCCCCC
Q 019692 131 AALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIE--VLHGDFLNLDPKDPAYS 208 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~--~~~~D~~~~~~~~~~~~ 208 (337)
..+.+.++.+|||+|||+|..+..+++. ..+|+++|+++.+++.++++ |+..+. +...++..++.. .+
T Consensus 101 ~~~~~~~~~~VLDiGcG~G~~~~~l~~~---g~~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~~~---~~ 170 (416)
T 4e2x_A 101 ATELTGPDPFIVEIGCNDGIMLRTIQEA---GVRHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVRRT---EG 170 (416)
T ss_dssp HTTTCSSSCEEEEETCTTTTTHHHHHHT---TCEEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHHHH---HC
T ss_pred HHhCCCCCCEEEEecCCCCHHHHHHHHc---CCcEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcccC---CC
Confidence 3355678999999999999999998875 35999999999999988866 544322 112223222211 15
Q ss_pred CccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 209 ~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
+||+|++. +++..-+| ...+|+.+.+++++ |.++.++
T Consensus 171 ~fD~I~~~------~vl~h~~d--------------------------~~~~l~~~~r~LkpgG~l~i~~ 208 (416)
T 4e2x_A 171 PANVIYAA------NTLCHIPY--------------------------VQSVLEGVDALLAPDGVFVFED 208 (416)
T ss_dssp CEEEEEEE------SCGGGCTT--------------------------HHHHHHHHHHHEEEEEEEEEEE
T ss_pred CEEEEEEC------ChHHhcCC--------------------------HHHHHHHHHHHcCCCeEEEEEe
Confidence 79999964 22321111 25678888888887 7777654
No 275
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.19 E-value=6.7e-06 Score=74.96 Aligned_cols=63 Identities=10% Similarity=0.085 Sum_probs=52.7
Q ss_pred CCeEEeecCCc--hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 019692 138 GWKVLDACSAP--GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200 (337)
Q Consensus 138 g~~VLDl~aG~--G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~ 200 (337)
...|||+|||+ ++.+..+++...+..+|+++|.|+.|++.++.++...+..+++++++|+.+.
T Consensus 79 ~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 79 IRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP 143 (277)
T ss_dssp CCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH
T ss_pred CCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh
Confidence 36899999997 5566777776667789999999999999999988755445799999999875
No 276
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=98.08 E-value=1.1e-05 Score=73.94 Aligned_cols=81 Identities=9% Similarity=0.175 Sum_probs=65.4
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC----CCCEEEEEeCCH--------------------------HHHHHHHHHHHHhC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK----GKGKIVACELNK--------------------------ERVRRLKDTIKLSG 186 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~----~~g~V~avD~~~--------------------------~~l~~l~~~~~~~g 186 (337)
..+.||++|++.|+.++.|+..+. +.++|+++|..+ .+++.+++++++.|
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 356999999999999999998764 367899999642 14778999999999
Q ss_pred C--CcEEEEeccCCCCCCCCCCCCCccEEEECCC
Q 019692 187 A--ANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 187 ~--~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
+ ++|+++.+|+.+..+..+ ..+||+|++|.-
T Consensus 186 l~~~~I~li~Gda~etL~~~~-~~~~d~vfIDaD 218 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAP-IDTLAVLRMDGD 218 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCC-CCCEEEEEECCC
T ss_pred CCcCceEEEEeCHHHHHhhCC-CCCEEEEEEcCC
Confidence 8 679999999977655432 257999999963
No 277
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.08 E-value=5.4e-06 Score=77.99 Aligned_cols=110 Identities=17% Similarity=0.091 Sum_probs=74.4
Q ss_pred HHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCCCCCC
Q 019692 130 AAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKDPAYS 208 (337)
Q Consensus 130 ~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~~~~~ 208 (337)
...++..++.+|||+|||+|..+..+++.. +..+++++|+ +..+. +++++..+. ++|+++.+|+....+
T Consensus 177 ~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~~p------ 246 (348)
T 3lst_A 177 ARAGDFPATGTVADVGGGRGGFLLTVLREH-PGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLREVP------ 246 (348)
T ss_dssp HHHSCCCSSEEEEEETCTTSHHHHHHHHHC-TTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTCCC------
T ss_pred HHhCCccCCceEEEECCccCHHHHHHHHHC-CCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCCCC------
Confidence 344566778999999999999999999885 4568999999 44444 333333444 359999999863211
Q ss_pred CccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 209 ~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
.||+|++-- ++.. ++..+ ..++|+++.+.+++ |+|+.....
T Consensus 247 ~~D~v~~~~------vlh~-----------------~~d~~-------~~~~L~~~~~~LkpgG~l~i~e~~ 288 (348)
T 3lst_A 247 HADVHVLKR------ILHN-----------------WGDED-------SVRILTNCRRVMPAHGRVLVIDAV 288 (348)
T ss_dssp CCSEEEEES------CGGG-----------------SCHHH-------HHHHHHHHHHTCCTTCEEEEEECC
T ss_pred CCcEEEEeh------hccC-----------------CCHHH-------HHHHHHHHHHhcCCCCEEEEEEec
Confidence 699998621 2211 11111 25789999998887 777766543
No 278
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.06 E-value=3.2e-05 Score=73.00 Aligned_cols=112 Identities=13% Similarity=0.084 Sum_probs=78.9
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
.+..+..+|+|+|||+|..+..+++.. +..+++..|. +..++.++++++..+.++|+++.+|+...+. ..+|+
T Consensus 175 ~~~~~~~~v~DvGgG~G~~~~~l~~~~-p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~-----~~~D~ 247 (353)
T 4a6d_A 175 FDLSVFPLMCDLGGGAGALAKECMSLY-PGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPL-----PEADL 247 (353)
T ss_dssp SCGGGCSEEEEETCTTSHHHHHHHHHC-SSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCC-----CCCSE
T ss_pred cCcccCCeEEeeCCCCCHHHHHHHHhC-CCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCC-----CCceE
Confidence 455667899999999999999999985 4568888887 8899999988876667789999999875432 34799
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
|++- -++.. |+.++ -.+||+++.+.+++ |+|+-...-+.
T Consensus 248 ~~~~------~vlh~-----------------~~d~~-------~~~iL~~~~~al~pgg~lli~e~~~~ 287 (353)
T 4a6d_A 248 YILA------RVLHD-----------------WADGK-------CSHLLERIYHTCKPGGGILVIESLLD 287 (353)
T ss_dssp EEEE------SSGGG-----------------SCHHH-------HHHHHHHHHHHCCTTCEEEEEECCCC
T ss_pred EEee------eeccc-----------------CCHHH-------HHHHHHHHHhhCCCCCEEEEEEeeeC
Confidence 8851 12211 12222 14678888887776 77666554433
No 279
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.05 E-value=5.7e-06 Score=78.94 Aligned_cols=82 Identities=17% Similarity=0.215 Sum_probs=61.4
Q ss_pred CeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC-----CCCCccEE
Q 019692 139 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP-----AYSEVRAI 213 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~-----~~~~fD~I 213 (337)
.+|+|++||.|+.++.+... +-..|.++|+++.+++..+.|. .+..++++|+.++....- ....+|+|
T Consensus 3 ~~vidLFsG~GGlslG~~~a--G~~~v~avE~d~~a~~t~~~N~-----~~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i 75 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARA--GFDVKMAVEIDQHAINTHAINF-----PRSLHVQEDVSLLNAEIIKGFFKNDMPIDGI 75 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHH--TCEEEEEECSCHHHHHHHHHHC-----TTSEEECCCGGGCCHHHHHHHHCSCCCCCEE
T ss_pred CeEEEEccCcCHHHHHHHHC--CCcEEEEEeCCHHHHHHHHHhC-----CCCceEecChhhcCHHHHHhhcccCCCeeEE
Confidence 47999999999999988775 3345789999999999988874 346678899887753210 12579999
Q ss_pred EECCCCCCccccCc
Q 019692 214 LLDPSCSGSGTAAE 227 (337)
Q Consensus 214 lvDpPCSg~G~~~~ 227 (337)
+.+|||.+.....+
T Consensus 76 ~ggpPCQ~fS~ag~ 89 (376)
T 3g7u_A 76 IGGPPCQGFSSIGK 89 (376)
T ss_dssp EECCCCCTTC----
T ss_pred EecCCCCCcccccC
Confidence 99999998876543
No 280
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=97.98 E-value=3.3e-06 Score=79.59 Aligned_cols=84 Identities=15% Similarity=0.165 Sum_probs=56.4
Q ss_pred CeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCC
Q 019692 139 WKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
.+|+|++||.|+.++.+...-..-..|+++|+++.+++..+.|.. +..++++|+.++....-....+|+|+.+||
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~-----~~~~~~~Di~~~~~~~~~~~~~D~l~~gpP 77 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFP-----HTQLLAKTIEGITLEEFDRLSFDMILMSPP 77 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECSCGGGCCHHHHHHHCCSEEEECCC
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhcc-----ccccccCCHHHccHhHcCcCCcCEEEEcCC
Confidence 479999999999999888751001379999999999999998863 334678898877532100015899999999
Q ss_pred CCCccccCc
Q 019692 219 CSGSGTAAE 227 (337)
Q Consensus 219 CSg~G~~~~ 227 (337)
|.+..+..+
T Consensus 78 Cq~fS~ag~ 86 (343)
T 1g55_A 78 CQPFTRIGR 86 (343)
T ss_dssp ---------
T ss_pred CcchhhcCC
Confidence 998876543
No 281
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=97.97 E-value=1.4e-05 Score=74.83 Aligned_cols=80 Identities=14% Similarity=0.206 Sum_probs=63.0
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDp 217 (337)
+-+|+|++||.|+.++.+... +-..|+++|+++.+++..+.|.... . ++|+.++.... ...+|+|+.+|
T Consensus 11 ~~~~~dLFaG~Gg~~~g~~~a--G~~~v~~~e~d~~a~~t~~~N~~~~----~---~~Di~~~~~~~--~~~~D~l~~gp 79 (327)
T 2c7p_A 11 GLRFIDLFAGLGGFRLALESC--GAECVYSNEWDKYAQEVYEMNFGEK----P---EGDITQVNEKT--IPDHDILCAGF 79 (327)
T ss_dssp TCEEEEETCTTTHHHHHHHHT--TCEEEEEECCCHHHHHHHHHHHSCC----C---BSCGGGSCGGG--SCCCSEEEEEC
T ss_pred CCcEEEECCCcCHHHHHHHHC--CCeEEEEEeCCHHHHHHHHHHcCCC----C---cCCHHHcCHhh--CCCCCEEEECC
Confidence 568999999999999888764 3456899999999999999987422 1 68888776443 24699999999
Q ss_pred CCCCccccCcc
Q 019692 218 SCSGSGTAAER 228 (337)
Q Consensus 218 PCSg~G~~~~~ 228 (337)
||.+.....++
T Consensus 80 PCQ~fS~ag~~ 90 (327)
T 2c7p_A 80 PCQAFSISGKQ 90 (327)
T ss_dssp CCTTTCTTSCC
T ss_pred CCCCcchhccc
Confidence 99998776543
No 282
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.93 E-value=6.8e-06 Score=72.55 Aligned_cols=123 Identities=15% Similarity=0.146 Sum_probs=80.3
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~ 212 (337)
.+++++.|+|+||+||+++...+... +..+|+|+|+-..-.+. -...+.+|.+.|++..+ |+..+.+ .++|.
T Consensus 75 ~l~~g~~VvDLGaapGGWSq~~a~~~-g~~~V~avdvG~~ghe~-P~~~~s~gwn~v~fk~gvDv~~~~~-----~~~Dt 147 (267)
T 3p8z_A 75 MVIPEGRVIDLGCGRGGWSYYCAGLK-KVTEVRGYTKGGPGHEE-PVPMSTYGWNIVKLMSGKDVFYLPP-----EKCDT 147 (267)
T ss_dssp SSCCCEEEEEESCTTSHHHHHHHTST-TEEEEEEECCCSTTSCC-CCCCCCTTTTSEEEECSCCGGGCCC-----CCCSE
T ss_pred CCCCCCEEEEcCCCCCcHHHHHHHhc-CCCEEEEEecCCCCccC-cchhhhcCcCceEEEeccceeecCC-----ccccE
Confidence 35789999999999999998887764 34589999996543210 00123467778999999 9866654 35999
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCcccCHHHHHHH
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~~ENe~vv~~~ 292 (337)
|+||.-=| +| +| ..+.... .+.|+-|.++++.|.++ |-++.-+..+|++.+
T Consensus 148 llcDIgeS-s~----~~----------------~vE~~Rt-----lrvLela~~wL~~~~fc---~KVl~py~p~v~e~l 198 (267)
T 3p8z_A 148 LLCDIGES-SP----SP----------------TVEESRT-----IRVLKMVEPWLKNNQFC---IKVLNPYMPTVIEHL 198 (267)
T ss_dssp EEECCCCC-CS----CH----------------HHHHHHH-----HHHHHHHGGGCSSCEEE---EEESCCCSHHHHHHH
T ss_pred EEEecCCC-CC----Ch----------------hhhhhHH-----HHHHHHHHHhcccCCEE---EEEccCCChhHHHHH
Confidence 99995432 22 11 0111111 23777777877666444 567777777776544
No 283
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=97.91 E-value=1.4e-06 Score=79.47 Aligned_cols=79 Identities=16% Similarity=0.143 Sum_probs=60.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-CCCCCCccEEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAILL 215 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~~fD~Ilv 215 (337)
.+..+||+++|+|..++.+.+ +..+++.+|.++..++.+++|++. .+++++++.|+...... .+...+||+||+
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS---~~d~~vfvE~~~~a~~~L~~Nl~~--~~~~~V~~~D~~~~L~~l~~~~~~fdLVfi 165 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLR---SQDRLYLCELHPTEYNFLLKLPHF--NKKVYVNHTDGVSKLNALLPPPEKRGLIFI 165 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSC---TTSEEEEECCSHHHHHHHTTSCCT--TSCEEEECSCHHHHHHHHCSCTTSCEEEEE
T ss_pred cCCCceeEeCCcHHHHHHHcC---CCCeEEEEeCCHHHHHHHHHHhCc--CCcEEEEeCcHHHHHHHhcCCCCCccEEEE
Confidence 466799999999988876544 447999999999999999999975 35699999996543211 111246999999
Q ss_pred CCCCC
Q 019692 216 DPSCS 220 (337)
Q Consensus 216 DpPCS 220 (337)
|||.-
T Consensus 166 DPPYe 170 (283)
T 2oo3_A 166 DPSYE 170 (283)
T ss_dssp CCCCC
T ss_pred CCCCC
Confidence 99953
No 284
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=97.86 E-value=2.8e-05 Score=73.73 Aligned_cols=67 Identities=15% Similarity=0.139 Sum_probs=54.3
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..+|+++.+|+.+ + . ..||+|+
T Consensus 207 ~~~~~~vLDvG~G~G~~~~~l~~~~-~~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~---~~~D~v~ 272 (372)
T 1fp1_D 207 FEGISTLVDVGGGSGRNLELIISKY-PLIKGINFDL-PQVIENAPP------LSGIEHVGGDMFA-S--V---PQGDAMI 272 (372)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-C--C---CCEEEEE
T ss_pred cCCCCEEEEeCCCCcHHHHHHHHHC-CCCeEEEeCh-HHHHHhhhh------cCCCEEEeCCccc-C--C---CCCCEEE
Confidence 5667899999999999999999985 4578999999 888877654 2569999999976 2 1 1289999
Q ss_pred E
Q 019692 215 L 215 (337)
Q Consensus 215 v 215 (337)
+
T Consensus 273 ~ 273 (372)
T 1fp1_D 273 L 273 (372)
T ss_dssp E
T ss_pred E
Confidence 6
No 285
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.84 E-value=2.8e-06 Score=77.09 Aligned_cols=82 Identities=22% Similarity=0.138 Sum_probs=50.6
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~I 213 (337)
++++.+|||+|||||+++..++... +...|+++|+...+...... .+..|.+-+.+... |...+. ..++|+|
T Consensus 88 Lk~~~~VLDLGaAPGGWsQvAa~~~-gv~sV~GvdvG~d~~~~pi~-~~~~g~~ii~~~~~~dv~~l~-----~~~~DvV 160 (282)
T 3gcz_A 88 VKPTGIVVDLGCGRGGWSYYAASLK-NVKKVMAFTLGVQGHEKPIM-RTTLGWNLIRFKDKTDVFNME-----VIPGDTL 160 (282)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCGGGSC-----CCCCSEE
T ss_pred CCCCCEEEEeCCCCCHHHHHHHHhc-CCCeeeeEEeccCccccccc-cccCCCceEEeeCCcchhhcC-----CCCcCEE
Confidence 5688999999999999998877653 44679999997543211110 01123222433322 433332 2579999
Q ss_pred EECCCCCCccc
Q 019692 214 LLDPSCSGSGT 224 (337)
Q Consensus 214 lvDpPCSg~G~ 224 (337)
++|.--+ +|.
T Consensus 161 LSDmApn-sG~ 170 (282)
T 3gcz_A 161 LCDIGES-SPS 170 (282)
T ss_dssp EECCCCC-CSC
T ss_pred EecCccC-CCC
Confidence 9997655 663
No 286
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=97.81 E-value=0.00027 Score=64.88 Aligned_cols=79 Identities=14% Similarity=0.100 Sum_probs=64.9
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh--C---CCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS--G---AANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~--g---~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
..+||=+|.|.|+.+..+.+.. +..+|+.+|+|+..++.+++.+... | -++++++.+|+..+.... .++||+
T Consensus 84 pk~VLIiGgGdG~~~revlk~~-~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~--~~~yDv 160 (294)
T 3o4f_A 84 AKHVLIIGGGDGAMLREVTRHK-NVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQT--SQTFDV 160 (294)
T ss_dssp CCEEEEESCTTSHHHHHHHTCT-TCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCS--SCCEEE
T ss_pred CCeEEEECCCchHHHHHHHHcC-CcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhc--cccCCE
Confidence 5699999999999988887753 3468999999999999999987653 2 246999999999887554 368999
Q ss_pred EEECCCC
Q 019692 213 ILLDPSC 219 (337)
Q Consensus 213 IlvDpPC 219 (337)
|++|.+-
T Consensus 161 Ii~D~~d 167 (294)
T 3o4f_A 161 IISDCTD 167 (294)
T ss_dssp EEESCCC
T ss_pred EEEeCCC
Confidence 9999874
No 287
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=97.80 E-value=7.6e-05 Score=70.74 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=72.0
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.++++ .+|+++.+|+.+.. + .. |+|+
T Consensus 201 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~~------~~v~~~~~d~~~~~---p--~~-D~v~ 266 (368)
T 3reo_A 201 FEGLTTIVDVGGGTGAVASMIVAKY-PSINAINFDL-PHVIQDAPAF------SGVEHLGGDMFDGV---P--KG-DAIF 266 (368)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCCC------TTEEEEECCTTTCC---C--CC-SEEE
T ss_pred ccCCCEEEEeCCCcCHHHHHHHHhC-CCCEEEEEeh-HHHHHhhhhc------CCCEEEecCCCCCC---C--CC-CEEE
Confidence 4567899999999999999999986 4578999999 8888766532 57999999987621 1 12 8988
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH 281 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~ 281 (337)
+-- ++.. |+.++ ..++|+++.+.+++ |+|+.....+.
T Consensus 267 ~~~------vlh~-----------------~~~~~-------~~~~l~~~~~~L~pgG~l~i~e~~~~ 304 (368)
T 3reo_A 267 IKW------ICHD-----------------WSDEH-------CLKLLKNCYAALPDHGKVIVAEYILP 304 (368)
T ss_dssp EES------CGGG-----------------BCHHH-------HHHHHHHHHHHSCTTCEEEEEECCCC
T ss_pred Eec------hhhc-----------------CCHHH-------HHHHHHHHHHHcCCCCEEEEEEeccC
Confidence 622 2211 11221 24788888887776 77777665543
No 288
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=97.75 E-value=7e-05 Score=75.74 Aligned_cols=120 Identities=14% Similarity=0.103 Sum_probs=80.3
Q ss_pred CCeEEeecCCchhH---HHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCCCCCCCCccEE
Q 019692 138 GWKVLDACSAPGNK---TVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 138 g~~VLDl~aG~G~k---t~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
+..|||+|||+|-. ++..++..+...+|+|||.++ +...+++..+.+|..+ |+++++|.+++... +++|+|
T Consensus 358 ~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LP----EKVDII 432 (637)
T 4gqb_A 358 VQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAP----EKADII 432 (637)
T ss_dssp EEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCS----SCEEEE
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCC----cccCEE
Confidence 34799999999987 444444433223799999997 5667788888899865 99999999988643 579999
Q ss_pred EECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCC--cccCHHHHH
Q 019692 214 LLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIH--QVENEDVIK 290 (337)
Q Consensus 214 lvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~--~~ENe~vv~ 290 (337)
+...= |+..+.- . -.+.|.++-+++++ |.++=+.|+++ +-+.+..-.
T Consensus 433 VSEwM--G~fLl~E-------------------------~---mlevL~Ardr~LKPgGimiPs~atlyiapi~~~~l~~ 482 (637)
T 4gqb_A 433 VSELL--GSFADNE-------------------------L---SPECLDGAQHFLKDDGVSIPGEYTSFLAPISSSKLYN 482 (637)
T ss_dssp ECCCC--BTTBGGG-------------------------C---HHHHHHHHGGGEEEEEEEESCEEEEEEEEEECHHHHH
T ss_pred EEEcC--ccccccc-------------------------C---CHHHHHHHHHhcCCCcEEccccceEEEEEecCHHHHH
Confidence 97753 3322210 0 12567777778887 55554444443 456665544
Q ss_pred HH
Q 019692 291 SV 292 (337)
Q Consensus 291 ~~ 292 (337)
..
T Consensus 483 e~ 484 (637)
T 4gqb_A 483 EV 484 (637)
T ss_dssp HH
T ss_pred HH
Confidence 43
No 289
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=97.74 E-value=0.00013 Score=69.08 Aligned_cols=102 Identities=16% Similarity=0.149 Sum_probs=71.6
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..+|+++.+|+.+ +.. .. |+|+
T Consensus 199 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~D~~~-~~p----~~-D~v~ 264 (364)
T 3p9c_A 199 FEGLGTLVDVGGGVGATVAAIAAHY-PTIKGVNFDL-PHVISEAPQ------FPGVTHVGGDMFK-EVP----SG-DTIL 264 (364)
T ss_dssp TTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------CTTEEEEECCTTT-CCC----CC-SEEE
T ss_pred ccCCCEEEEeCCCCCHHHHHHHHHC-CCCeEEEecC-HHHHHhhhh------cCCeEEEeCCcCC-CCC----CC-CEEE
Confidence 5667899999999999999999986 4578999999 888776553 2579999999886 321 12 8998
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSI 280 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~ 280 (337)
+-- ++.. |+.++ -.++|+++.+.+++ |+|+.....+
T Consensus 265 ~~~------vlh~-----------------~~d~~-------~~~~L~~~~~~L~pgG~l~i~e~~~ 301 (364)
T 3p9c_A 265 MKW------ILHD-----------------WSDQH-------CATLLKNCYDALPAHGKVVLVQCIL 301 (364)
T ss_dssp EES------CGGG-----------------SCHHH-------HHHHHHHHHHHSCTTCEEEEEECCB
T ss_pred ehH------Hhcc-----------------CCHHH-------HHHHHHHHHHHcCCCCEEEEEEecc
Confidence 521 2211 11221 24788888887776 7777665544
No 290
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=97.74 E-value=1.8e-05 Score=71.64 Aligned_cols=84 Identities=17% Similarity=0.068 Sum_probs=50.0
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
.++++.+|||+|||||+++..++... +...|+++|+.......... ....|. ++..+..++...... ..+||+|
T Consensus 71 ~l~~~~~VLDLGaAPGGWSQvAa~~~-~~~~v~g~dVGvDl~~~pi~-~~~~g~-~ii~~~~~~dv~~l~---~~~~DlV 144 (277)
T 3evf_A 71 YVKLEGRVIDLGCGRGGWCYYAAAQK-EVSGVKGFTLGRDGHEKPMN-VQSLGW-NIITFKDKTDIHRLE---PVKCDTL 144 (277)
T ss_dssp SSCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTCCCCCC-CCBTTG-GGEEEECSCCTTTSC---CCCCSEE
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHhc-CCCcceeEEEeccCcccccc-cCcCCC-CeEEEeccceehhcC---CCCccEE
Confidence 35688999999999999998877653 34578888887432100000 011122 444455554322211 2579999
Q ss_pred EECCCCCCccc
Q 019692 214 LLDPSCSGSGT 224 (337)
Q Consensus 214 lvDpPCSg~G~ 224 (337)
++|.--+ +|.
T Consensus 145 lsD~apn-sG~ 154 (277)
T 3evf_A 145 LCDIGES-SSS 154 (277)
T ss_dssp EECCCCC-CSC
T ss_pred EecCccC-cCc
Confidence 9997544 553
No 291
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.72 E-value=1.6e-05 Score=72.68 Aligned_cols=82 Identities=16% Similarity=0.083 Sum_probs=50.1
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~I 213 (337)
.++|.+|||+|||||+++..+++.. +...|+++|+.......... .+..+.+.+.+... |+..+. ..++|+|
T Consensus 79 ~~~g~~vlDLGaaPGgWsqva~~~~-gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~l~-----~~~~DlV 151 (300)
T 3eld_A 79 LRITGRVLDLGCGRGGWSYYAAAQK-EVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFTMP-----TEPSDTL 151 (300)
T ss_dssp CCCCEEEEEETCTTCHHHHHHHTST-TEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTTSC-----CCCCSEE
T ss_pred CCCCCEEEEcCCCCCHHHHHHHHhc-CCceeeeEEecccccccccc-ccccCCceEEeecCceeeecC-----CCCcCEE
Confidence 3579999999999999999988753 34578999996432100000 00112122333322 333322 2579999
Q ss_pred EECCCCCCccc
Q 019692 214 LLDPSCSGSGT 224 (337)
Q Consensus 214 lvDpPCSg~G~ 224 (337)
++|.-.+ +|.
T Consensus 152 lsD~APn-sG~ 161 (300)
T 3eld_A 152 LCDIGES-SSN 161 (300)
T ss_dssp EECCCCC-CSS
T ss_pred eecCcCC-CCC
Confidence 9998877 774
No 292
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=97.64 E-value=3.2e-05 Score=78.54 Aligned_cols=125 Identities=11% Similarity=0.117 Sum_probs=81.3
Q ss_pred CCeEEeecCCchhHHHHH---HHHcC---------CCCEEEEEeCCHHHHHHHHHHHHHhCCCc-EEEEeccCCCCCCC-
Q 019692 138 GWKVLDACSAPGNKTVHL---AALMK---------GKGKIVACELNKERVRRLKDTIKLSGAAN-IEVLHGDFLNLDPK- 203 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~l---a~~~~---------~~g~V~avD~~~~~l~~l~~~~~~~g~~~-v~~~~~D~~~~~~~- 203 (337)
+..|||+|||+|-.+... ++..+ .+.+|+|||.++.++..++.... +|..+ |+++.+|.+++...
T Consensus 410 ~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp~ 488 (745)
T 3ua3_A 410 TVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGIA 488 (745)
T ss_dssp EEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHHH
T ss_pred CcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhccccc
Confidence 347999999999986432 22222 23499999999988877766654 77766 99999999987531
Q ss_pred -CCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCC--
Q 019692 204 -DPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCS-- 279 (337)
Q Consensus 204 -~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS-- 279 (337)
....+++|+|+...- |.+-- -+++.+.|..+-+++++ |.++=+.|+
T Consensus 489 ~~~~~ekVDIIVSElm----Gsfl~--------------------------nEL~pe~Ld~v~r~Lkp~Gi~iP~~~t~y 538 (745)
T 3ua3_A 489 KDRGFEQPDIIVSELL----GSFGD--------------------------NELSPECLDGVTGFLKPTTISIPQKYTSY 538 (745)
T ss_dssp HHTTCCCCSEEEECCC----BTTBG--------------------------GGSHHHHHHTTGGGSCTTCEEESCEEEEE
T ss_pred ccCCCCcccEEEEecc----ccccc--------------------------hhccHHHHHHHHHhCCCCcEEECCccEEE
Confidence 001257999998765 22210 01234677777788887 655544443
Q ss_pred CCcccCHHHHHHHh
Q 019692 280 IHQVENEDVIKSVL 293 (337)
Q Consensus 280 ~~~~ENe~vv~~~l 293 (337)
+.|-+.+..-+.+.
T Consensus 539 laPi~~~~l~~~v~ 552 (745)
T 3ua3_A 539 VKPIMSTHIHQTIK 552 (745)
T ss_dssp EEEEECHHHHHHHH
T ss_pred EEEecCHHHHHHHH
Confidence 34566666555443
No 293
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=97.63 E-value=0.00017 Score=66.39 Aligned_cols=48 Identities=19% Similarity=0.146 Sum_probs=41.8
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhC
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSG 186 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g 186 (337)
.+|+.|||.|||+|..+..++.+ +.+++++|+++.+++.++++++...
T Consensus 234 ~~~~~vlD~f~GsGt~~~~a~~~---g~~~~g~e~~~~~~~~a~~r~~~~~ 281 (297)
T 2zig_A 234 FVGDVVLDPFAGTGTTLIAAARW---GRRALGVELVPRYAQLAKERFAREV 281 (297)
T ss_dssp CTTCEEEETTCTTTHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHHHS
T ss_pred CCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHHhc
Confidence 68999999999999887776654 3689999999999999999998763
No 294
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=97.58 E-value=4e-05 Score=62.88 Aligned_cols=64 Identities=14% Similarity=0.192 Sum_probs=50.2
Q ss_pred CCCCeEEeecCCch-hHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE-
Q 019692 136 KPGWKVLDACSAPG-NKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI- 213 (337)
Q Consensus 136 ~~g~~VLDl~aG~G-~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I- 213 (337)
.++++|||+|||+| ..+..|++.. +..|+|+|+++..+. ++..|..+.... .+..||+|
T Consensus 34 ~~~~rVlEVG~G~g~~vA~~La~~~--g~~V~atDInp~Av~---------------~v~dDiF~P~~~--~Y~~~DLIY 94 (153)
T 2k4m_A 34 GPGTRVVEVGAGRFLYVSDYIRKHS--KVDLVLTDIKPSHGG---------------IVRDDITSPRME--IYRGAALIY 94 (153)
T ss_dssp CSSSEEEEETCTTCCHHHHHHHHHS--CCEEEEECSSCSSTT---------------EECCCSSSCCHH--HHTTEEEEE
T ss_pred CCCCcEEEEccCCChHHHHHHHHhC--CCeEEEEECCccccc---------------eEEccCCCCccc--ccCCcCEEE
Confidence 45789999999999 5888888742 367999999988765 788898774322 12479999
Q ss_pred EECCC
Q 019692 214 LLDPS 218 (337)
Q Consensus 214 lvDpP 218 (337)
-+.||
T Consensus 95 sirPP 99 (153)
T 2k4m_A 95 SIRPP 99 (153)
T ss_dssp EESCC
T ss_pred EcCCC
Confidence 88888
No 295
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=97.55 E-value=0.00011 Score=69.02 Aligned_cols=67 Identities=18% Similarity=0.229 Sum_probs=53.8
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
..++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..+|+++.+|+.+ + . ..||+|+
T Consensus 186 ~~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~--~---p~~D~v~ 251 (352)
T 1fp2_A 186 FDGLESIVDVGGGTGTTAKIICETF-PKLKCIVFDR-PQVVENLSG------SNNLTYVGGDMFT-S--I---PNADAVL 251 (352)
T ss_dssp HTTCSEEEEETCTTSHHHHHHHHHC-TTCEEEEEEC-HHHHTTCCC------BTTEEEEECCTTT-C--C---CCCSEEE
T ss_pred cccCceEEEeCCCccHHHHHHHHHC-CCCeEEEeeC-HHHHhhccc------CCCcEEEeccccC-C--C---CCccEEE
Confidence 3567899999999999999999875 4578999999 999887664 2459999999865 2 1 1389999
Q ss_pred E
Q 019692 215 L 215 (337)
Q Consensus 215 v 215 (337)
+
T Consensus 252 ~ 252 (352)
T 1fp2_A 252 L 252 (352)
T ss_dssp E
T ss_pred e
Confidence 6
No 296
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=97.51 E-value=2.5e-05 Score=65.64 Aligned_cols=62 Identities=18% Similarity=0.021 Sum_probs=47.3
Q ss_pred hCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 133 LAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
+.+++|++|||++||. +++|+++.|++.++++... +++++++|+.+++......++||+
T Consensus 8 ~g~~~g~~vL~~~~g~-----------------v~vD~s~~ml~~a~~~~~~----~~~~~~~d~~~~~~~~~~~~~fD~ 66 (176)
T 2ld4_A 8 FGISAGQFVAVVWDKS-----------------SPVEALKGLVDKLQALTGN----EGRVSVENIKQLLQSAHKESSFDI 66 (176)
T ss_dssp TTCCTTSEEEEEECTT-----------------SCHHHHHHHHHHHHHHTTT----TSEEEEEEGGGGGGGCCCSSCEEE
T ss_pred cCCCCCCEEEEecCCc-----------------eeeeCCHHHHHHHHHhccc----CcEEEEechhcCccccCCCCCEeE
Confidence 4578999999999986 2389999999999987532 488999999887641001267999
Q ss_pred EEE
Q 019692 213 ILL 215 (337)
Q Consensus 213 Ilv 215 (337)
|++
T Consensus 67 V~~ 69 (176)
T 2ld4_A 67 ILS 69 (176)
T ss_dssp EEE
T ss_pred EEE
Confidence 996
No 297
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=97.37 E-value=0.00012 Score=68.64 Aligned_cols=83 Identities=18% Similarity=0.236 Sum_probs=61.1
Q ss_pred eEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCCC
Q 019692 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
+|+|++||.||.+..+...--+...|.|+|+++.+++..+.|.. +..++++|..++....-....+|+++..|||
T Consensus 5 ~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~~DI~~~~~~~~~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 5 KILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFP-----ETNLLNRNIQQLTPQVIKKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCT-----TSCEECCCGGGCCHHHHHHTTCCEEEECCCC
T ss_pred EEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCC-----CCceeccccccCCHHHhccCCCCEEEecCCC
Confidence 79999999999998887651011358899999999999888853 2346778888775432101258999999999
Q ss_pred CCccccCc
Q 019692 220 SGSGTAAE 227 (337)
Q Consensus 220 Sg~G~~~~ 227 (337)
.+.....+
T Consensus 80 Q~fS~ag~ 87 (333)
T 4h0n_A 80 QPFTRNGK 87 (333)
T ss_dssp CCSEETTE
T ss_pred cchhhhhh
Confidence 98776544
No 298
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.37 E-value=0.0002 Score=65.25 Aligned_cols=78 Identities=14% Similarity=0.086 Sum_probs=55.3
Q ss_pred CCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccE
Q 019692 134 APKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~ 212 (337)
.+++++.|||+||+||+++...+... +..+|+|+|+-..-.+. -...+.+|.+.|.+..+ |+..+.+ .++|.
T Consensus 91 ~l~~~~~VlDLGaapGGwsq~~~~~~-gv~~V~avdvG~~~he~-P~~~~ql~w~lV~~~~~~Dv~~l~~-----~~~D~ 163 (321)
T 3lkz_A 91 FLEPVGKVIDLGCGRGGWCYYMATQK-RVQEVRGYTKGGPGHEE-PQLVQSYGWNIVTMKSGVDVFYRPS-----ECCDT 163 (321)
T ss_dssp SCCCCEEEEEETCTTCHHHHHHTTCT-TEEEEEEECCCSTTSCC-CCCCCBTTGGGEEEECSCCTTSSCC-----CCCSE
T ss_pred CCCCCCEEEEeCCCCCcHHHHHHhhc-CCCEEEEEEcCCCCccC-cchhhhcCCcceEEEeccCHhhCCC-----CCCCE
Confidence 35788999999999999998777764 34589999997541100 00011334445888887 8877765 35999
Q ss_pred EEECCC
Q 019692 213 ILLDPS 218 (337)
Q Consensus 213 IlvDpP 218 (337)
|+||.-
T Consensus 164 ivcDig 169 (321)
T 3lkz_A 164 LLCDIG 169 (321)
T ss_dssp EEECCC
T ss_pred EEEECc
Confidence 999988
No 299
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=97.34 E-value=0.00025 Score=65.30 Aligned_cols=85 Identities=12% Similarity=0.126 Sum_probs=62.9
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCE-EEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-CCCCCccEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGK-IVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-PAYSEVRAI 213 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~-V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-~~~~~fD~I 213 (337)
+.+-+|+|++||.||.+..+... +-... |+++|+++.+++..+.|. .+..++.+|..++.... +....+|+|
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~a-G~~~~~v~a~E~d~~a~~ty~~N~-----~~~~~~~~DI~~i~~~~i~~~~~~Dll 87 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDL-GIQVDRYIASEVCEDSITVGMVRH-----QGKIMYVGDVRSVTQKHIQEWGPFDLV 87 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHT-TBCEEEEEEECCCHHHHHHHHHHT-----TTCEEEECCGGGCCHHHHHHTCCCSEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHC-CCccceEEEEECCHHHHHHHHHhC-----CCCceeCCChHHccHHHhcccCCcCEE
Confidence 44668999999999999888764 21112 699999999998888774 23457788988876432 112469999
Q ss_pred EECCCCCCccccC
Q 019692 214 LLDPSCSGSGTAA 226 (337)
Q Consensus 214 lvDpPCSg~G~~~ 226 (337)
+..|||.+.....
T Consensus 88 ~ggpPCQ~fS~ag 100 (295)
T 2qrv_A 88 IGGSPCNDLSIVN 100 (295)
T ss_dssp EECCCCGGGBTTC
T ss_pred EecCCCccccccC
Confidence 9999999877654
No 300
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.33 E-value=0.00012 Score=68.41 Aligned_cols=78 Identities=12% Similarity=0.126 Sum_probs=58.3
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEE-EEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKI-VACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V-~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.-+|+|++||.||.+..+... + +...| .|+|+++.+++..+.|... . ++++|..++....-....+|+++.
T Consensus 10 ~~~vidLFaG~GG~~~G~~~a-G~~~~~v~~a~e~d~~a~~ty~~N~~~-----~-~~~~DI~~~~~~~i~~~~~Dil~g 82 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERS-SININATFIPFDINEIANKIYSKNFKE-----E-VQVKNLDSISIKQIESLNCNTWFM 82 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHS-SCCCCEEEEEECCCHHHHHHHHHHHCC-----C-CBCCCTTTCCHHHHHHTCCCEEEE
T ss_pred CCEEEEECCChhHHHHHHHHc-CCCceEEEEEEECCHHHHHHHHHHCCC-----C-cccCChhhcCHHHhccCCCCEEEe
Confidence 358999999999999888764 2 11356 7999999999999988631 1 567888877543210125899999
Q ss_pred CCCCCCc
Q 019692 216 DPSCSGS 222 (337)
Q Consensus 216 DpPCSg~ 222 (337)
.|||.+.
T Consensus 83 gpPCQ~f 89 (327)
T 3qv2_A 83 SPPCQPY 89 (327)
T ss_dssp CCCCTTC
T ss_pred cCCccCc
Confidence 9999987
No 301
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=97.30 E-value=0.00064 Score=65.40 Aligned_cols=65 Identities=12% Similarity=0.082 Sum_probs=54.2
Q ss_pred CCCCCCeEEeecCCchhHHHHHH-HHcCCCCEEEEEeCCHHHHHHHHHHHHH---hCC-CcEEEEeccCC
Q 019692 134 APKPGWKVLDACSAPGNKTVHLA-ALMKGKGKIVACELNKERVRRLKDTIKL---SGA-ANIEVLHGDFL 198 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~G~kt~~la-~~~~~~g~V~avD~~~~~l~~l~~~~~~---~g~-~~v~~~~~D~~ 198 (337)
.+++|+.|+|+||+.|..+..++ ...++.++|+|+|.++...+.+++|++. .+. .||++++.-+.
T Consensus 223 ~l~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 223 RFSDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred ccCCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 45789999999999999999988 4444448999999999999999999998 346 78888876543
No 302
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=97.30 E-value=0.00031 Score=65.99 Aligned_cols=66 Identities=18% Similarity=0.241 Sum_probs=52.9
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.++.+|||+|||+|..+..+++.. +..+++++|+ +.+++.+++ ..+|+++.+|+.+ +. ..||+|++
T Consensus 192 ~~~~~vlDvG~G~G~~~~~l~~~~-p~~~~~~~D~-~~~~~~a~~------~~~v~~~~~d~~~-~~-----~~~D~v~~ 257 (358)
T 1zg3_A 192 EGLESLVDVGGGTGGVTKLIHEIF-PHLKCTVFDQ-PQVVGNLTG------NENLNFVGGDMFK-SI-----PSADAVLL 257 (358)
T ss_dssp HTCSEEEEETCTTSHHHHHHHHHC-TTSEEEEEEC-HHHHSSCCC------CSSEEEEECCTTT-CC-----CCCSEEEE
T ss_pred cCCCEEEEECCCcCHHHHHHHHHC-CCCeEEEecc-HHHHhhccc------CCCcEEEeCccCC-CC-----CCceEEEE
Confidence 467899999999999999999985 4578999999 788776553 3569999999876 21 24899996
No 303
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=97.29 E-value=0.00022 Score=66.26 Aligned_cols=78 Identities=14% Similarity=0.276 Sum_probs=62.4
Q ss_pred eEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCCC
Q 019692 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
+|+|++||.||.++.+.+. +-..|.|+|+++.+++..+.|. + -.++.+|..++.... +..+|+|+.-|||
T Consensus 2 kvidLFsG~GG~~~G~~~a--G~~~v~a~e~d~~a~~ty~~N~---~---~~~~~~DI~~i~~~~--~~~~D~l~ggpPC 71 (331)
T 3ubt_Y 2 NLISLFSGAGGLDLGFQKA--GFRIICANEYDKSIWKTYESNH---S---AKLIKGDISKISSDE--FPKCDGIIGGPPS 71 (331)
T ss_dssp EEEEESCTTCHHHHHHHHT--TCEEEEEEECCTTTHHHHHHHC---C---SEEEESCGGGCCGGG--SCCCSEEECCCCG
T ss_pred eEEEeCcCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHHC---C---CCcccCChhhCCHhh--CCcccEEEecCCC
Confidence 7999999999999887664 2236789999999999988874 2 256789998886543 4579999999999
Q ss_pred CCccccCc
Q 019692 220 SGSGTAAE 227 (337)
Q Consensus 220 Sg~G~~~~ 227 (337)
.+..+..+
T Consensus 72 Q~fS~ag~ 79 (331)
T 3ubt_Y 72 QSWSEGGS 79 (331)
T ss_dssp GGTEETTE
T ss_pred CCcCCCCC
Confidence 99877654
No 304
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=97.25 E-value=0.00035 Score=62.87 Aligned_cols=50 Identities=20% Similarity=0.323 Sum_probs=40.2
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~ 187 (337)
..+|+.|||.+||+|..+.....+ +.+++++|+++..++.++++++.+++
T Consensus 210 ~~~~~~vlD~f~GsGtt~~~a~~~---gr~~ig~e~~~~~~~~~~~r~~~~~~ 259 (260)
T 1g60_A 210 SNPNDLVLDCFMGSGTTAIVAKKL---GRNFIGCDMNAEYVNQANFVLNQLEI 259 (260)
T ss_dssp CCTTCEEEESSCTTCHHHHHHHHT---TCEEEEEESCHHHHHHHHHHHHC---
T ss_pred CCCCCEEEECCCCCCHHHHHHHHc---CCeEEEEeCCHHHHHHHHHHHHhccC
Confidence 368999999999999776655443 36899999999999999999987654
No 305
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=97.23 E-value=0.00057 Score=64.43 Aligned_cols=81 Identities=15% Similarity=0.130 Sum_probs=61.2
Q ss_pred CeEEEechh-hHHHHHHhCCCC------CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 117 GCVFLQGKA-SSMVAAALAPKP------GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 117 G~~~~Qd~s-s~l~~~~l~~~~------g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
|.-++.|+. ..-++..+++.+ ++.|||+|.|+|..|..|+.... ..+|+++|+|++.+..+++.. . ..+
T Consensus 31 GQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~-~~~vvavE~D~~l~~~L~~~~-~--~~~ 106 (353)
T 1i4w_A 31 GFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYC-PRQYSLLEKRSSLYKFLNAKF-E--GSP 106 (353)
T ss_dssp GCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHC-CSEEEEECCCHHHHHHHHHHT-T--TSS
T ss_pred CcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCC-CCEEEEEecCHHHHHHHHHhc-c--CCC
Confidence 444444544 344455566653 58999999999999999998642 368999999999999998876 2 367
Q ss_pred EEEEeccCCCCC
Q 019692 190 IEVLHGDFLNLD 201 (337)
Q Consensus 190 v~~~~~D~~~~~ 201 (337)
++++++|+..++
T Consensus 107 l~ii~~D~l~~~ 118 (353)
T 1i4w_A 107 LQILKRDPYDWS 118 (353)
T ss_dssp CEEECSCTTCHH
T ss_pred EEEEECCccchh
Confidence 999999997653
No 306
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=97.10 E-value=0.00069 Score=64.22 Aligned_cols=123 Identities=14% Similarity=0.104 Sum_probs=79.9
Q ss_pred CCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHh-----C---CCcEEEEeccCCCCCCCC-CC
Q 019692 136 KPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLS-----G---AANIEVLHGDFLNLDPKD-PA 206 (337)
Q Consensus 136 ~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~-----g---~~~v~~~~~D~~~~~~~~-~~ 206 (337)
.+..+||=+|.|.|+....+.+. +..+|+.||+|+..++.+++.+... . .++++++.+|+..+.... ..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh--~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~ 281 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKL--KPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKE 281 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTT--CCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHH
T ss_pred CCCCeEEEECCCcHHHHHHHHhc--CCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhc
Confidence 35689999999999988888765 3479999999999999999876321 1 124899999987654210 01
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEE-EcCCCCc
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVY-STCSIHQ 282 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvY-sTCS~~~ 282 (337)
.++||+|++|.+-...+. .| ... ......++.++.+.+.|++ |.+|- +.|-..+
T Consensus 282 ~~~yDvIIvDl~D~~~s~---~p------------------~g~-a~~Lft~eFy~~~~~~L~p~GVlv~Q~~s~~~~ 337 (381)
T 3c6k_A 282 GREFDYVINDLTAVPIST---SP------------------EED-STWEFLRLILDLSMKVLKQDGKYFTQGNCVNLT 337 (381)
T ss_dssp TCCEEEEEEECCSSCCCC---C-----------------------CHHHHHHHHHHHHHHTEEEEEEEEEEEEETTCH
T ss_pred cCceeEEEECCCCCcccC---cc------------------cCc-chHHHHHHHHHHHHHhcCCCCEEEEecCCCcch
Confidence 257999999976322111 00 000 0123456777777778887 66554 3444443
No 307
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=96.64 E-value=0.0014 Score=64.39 Aligned_cols=85 Identities=16% Similarity=0.228 Sum_probs=58.6
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------------
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD------------- 204 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~------------- 204 (337)
.-+|+|+|||.||.+..+... +-..|+++|+++.+++..+.|... ..+..++++|+.++....
T Consensus 88 ~~~viDLFaG~GGlslG~~~a--G~~~v~avE~d~~A~~ty~~N~~~--~p~~~~~~~DI~~i~~~~~~~~~~~~~~~~i 163 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESI--GGQCVFTSEWNKHAVRTYKANHYC--DPATHHFNEDIRDITLSHQEGVSDEAAAEHI 163 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTT--TEEEEEEECCCHHHHHHHHHHSCC--CTTTCEEESCTHHHHCTTCTTSCHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHC--CCEEEEEEeCCHHHHHHHHHhccc--CCCcceeccchhhhhhccccccchhhHHhhh
Confidence 458999999999999888654 223589999999999988877521 123346678877664321
Q ss_pred -CCCCCccEEEECCCCCCccccC
Q 019692 205 -PAYSEVRAILLDPSCSGSGTAA 226 (337)
Q Consensus 205 -~~~~~fD~IlvDpPCSg~G~~~ 226 (337)
.....+|+|+.-|||-+..+..
T Consensus 164 ~~~~~~~Dvl~gGpPCQ~FS~AG 186 (482)
T 3me5_A 164 RQHIPEHDVLLAGFPCQPFSLAG 186 (482)
T ss_dssp HHHSCCCSEEEEECCCCCC----
T ss_pred hhcCCCCCEEEecCCCcchhhhC
Confidence 0124689999999999877654
No 308
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=96.49 E-value=0.0045 Score=56.40 Aligned_cols=127 Identities=15% Similarity=0.091 Sum_probs=76.7
Q ss_pred CCCCCCeEEeecC------CchhHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC
Q 019692 134 APKPGWKVLDACS------APGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 134 ~~~~g~~VLDl~a------G~G~kt~~la~~~~~~-g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~ 206 (337)
.+.-|++|||+|| +||+ ..+.+. .+. +.|+++|+.+-.. ..++ ++++|...+..
T Consensus 106 ~vp~gmrVLDLGA~s~kg~APGS--~VLr~~-~p~g~~VVavDL~~~~s-----------da~~-~IqGD~~~~~~---- 166 (344)
T 3r24_A 106 AVPYNMRVIHFGAGSDKGVAPGT--AVLRQW-LPTGTLLVDSDLNDFVS-----------DADS-TLIGDCATVHT---- 166 (344)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH--HHHHHH-SCTTCEEEEEESSCCBC-----------SSSE-EEESCGGGEEE----
T ss_pred eecCCCEEEeCCCCCCCCCCCcH--HHHHHh-CCCCcEEEEeeCccccc-----------CCCe-EEEcccccccc----
Confidence 3556999999996 9997 334444 555 5999999976321 1233 48999765443
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEcCCCCcccC
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYSTCSIHQVEN 285 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsTCS~~~~EN 285 (337)
..+||+|+.|.-..-+|.. .-|. .+ ...|+ ..+|+-|.+.|++ |.+| |-++..|.
T Consensus 167 ~~k~DLVISDMAPNtTG~~--D~d~----------~R------s~~L~---ElALdfA~~~LkpGGsFv---VKVFQGsg 222 (344)
T 3r24_A 167 ANKWDLIISDMYDPRTKHV--TKEN----------DS------KEGFF---TYLCGFIKQKLALGGSIA---VKITEHSW 222 (344)
T ss_dssp SSCEEEEEECCCCTTSCSS--CSCC----------CC------CCTHH---HHHHHHHHHHEEEEEEEE---EEECSSSC
T ss_pred CCCCCEEEecCCCCcCCcc--ccch----------hH------HHHHH---HHHHHHHHHhCcCCCEEE---EEEecCCC
Confidence 2679999999887777762 1110 00 01233 3455556666665 6666 45666555
Q ss_pred HHHHHHHhchhcCCCcEEecCCC
Q 019692 286 EDVIKSVLPIAMSFGFQLATPFP 308 (337)
Q Consensus 286 e~vv~~~l~~~~~~~~~~~~~~~ 308 (337)
++.+..+. ..|+.+..++
T Consensus 223 ~~~L~~lr-----k~F~~VK~fK 240 (344)
T 3r24_A 223 NADLYKLM-----GHFSWWTAFV 240 (344)
T ss_dssp CHHHHHHH-----TTEEEEEEEE
T ss_pred HHHHHHHH-----hhCCeEEEEC
Confidence 55454443 2566665544
No 309
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=95.92 E-value=0.019 Score=61.01 Aligned_cols=81 Identities=19% Similarity=0.213 Sum_probs=57.0
Q ss_pred CeEEeecCCchhHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC------------CCC-C
Q 019692 139 WKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL------------DPK-D 204 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~~-g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~------------~~~-~ 204 (337)
-+++|++||.||.++.+... +- ..|.|+|+++.+++..+.|. .+..++.+|...+ ... .
T Consensus 541 l~~iDLFaG~GGlslGl~~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~~di~~~~~~~l 613 (1002)
T 3swr_A 541 LRTLDVFSGCGGLSEGFHQA--GISDTLWAIEMWDPAAQAFRLNN-----PGSTVFTEDCNILLKLVMAGETTNSRGQRL 613 (1002)
T ss_dssp EEEEEESCTTSHHHHHHHHH--TSEEEEEEECSSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHHHTCSBCTTCCBC
T ss_pred CeEEEeccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCccccccHHHHhhhccchhhhhhhhhhc
Confidence 47999999999999988775 21 25789999999999888774 2344555554221 111 1
Q ss_pred CCCCCccEEEECCCCCCccccC
Q 019692 205 PAYSEVRAILLDPSCSGSGTAA 226 (337)
Q Consensus 205 ~~~~~fD~IlvDpPCSg~G~~~ 226 (337)
+..+.+|+|+.-|||-+.....
T Consensus 614 p~~~~vDll~GGpPCQ~FS~ag 635 (1002)
T 3swr_A 614 PQKGDVEMLCGGPPCQGFSGMN 635 (1002)
T ss_dssp CCTTTCSEEEECCCCTTCCSSS
T ss_pred ccCCCeeEEEEcCCCcchhhhC
Confidence 1124699999999999876543
No 310
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=95.70 E-value=0.43 Score=43.20 Aligned_cols=121 Identities=18% Similarity=0.135 Sum_probs=74.6
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEE-eccCCCCCCCCCCCCCccEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVL-HGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~-~~D~~~~~~~~~~~~~fD~Il 214 (337)
.+.+||=.| |+|+.+.+++..+. .+.+|++++.+......+.+.+....-.+++++ .+|..+...-......+|.|+
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi 88 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA 88 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence 467788555 67888888877653 335899999998877666555543211458888 789876543332235789999
Q ss_pred ECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcC
Q 019692 215 LDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTC 278 (337)
Q Consensus 215 vDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTC 278 (337)
..+..+..+ .. ..+.+.........+++.+.+....+++||++.
T Consensus 89 h~A~~~~~~---~~-----------------~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS 132 (342)
T 1y1p_A 89 HIASVVSFS---NK-----------------YDEVVTPAIGGTLNALRAAAATPSVKRFVLTSS 132 (342)
T ss_dssp ECCCCCSCC---SC-----------------HHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECC
T ss_pred EeCCCCCCC---CC-----------------HHHHHHHHHHHHHHHHHHHHhCCCCcEEEEecc
Confidence 876543221 00 122233344455677777764333478887654
No 311
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=95.62 E-value=0.016 Score=55.41 Aligned_cols=89 Identities=10% Similarity=0.012 Sum_probs=60.1
Q ss_pred CeEEeecCCchhHHHHHHHHcCCCCE----EEEEeCCHHHHHHHHHHHHHhCCC--------------------------
Q 019692 139 WKVLDACSAPGNKTVHLAALMKGKGK----IVACELNKERVRRLKDTIKLSGAA-------------------------- 188 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~~g~----V~avD~~~~~l~~l~~~~~~~g~~-------------------------- 188 (337)
-+|+|+|||.||.+..+...-.+-.. |.++|+++.+++..+.|....+.-
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 48999999999998888765110123 889999999999988887432100
Q ss_pred -----cEE----------EEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcc
Q 019692 189 -----NIE----------VLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAER 228 (337)
Q Consensus 189 -----~v~----------~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~ 228 (337)
.+. ...+|..++....- .+.+|+++.-|||.+.....++
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~i-p~~vDll~ggpPCQ~fS~ag~~ 144 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKDNF-PKNIDIFTYSFPCQDLSVQGLQ 144 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTS-CSSCSEEEECCCCTTTCTTSCC
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHhhC-CCCCcEEEEeCCCCCHHHhCCC
Confidence 000 03467777654432 1357999999999887766543
No 312
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=95.62 E-value=0.02 Score=59.40 Aligned_cols=45 Identities=22% Similarity=0.083 Sum_probs=35.3
Q ss_pred CCeEEeecCCchhHHHHHHHHcCC---C-CEEEEEeCCHHHHHHHHHHH
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKG---K-GKIVACELNKERVRRLKDTI 182 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~---~-g~V~avD~~~~~l~~l~~~~ 182 (337)
.-+|+|++||.||.++-+...... . ..+.|+|+++.+++..+.|.
T Consensus 212 ~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nh 260 (784)
T 4ft4_B 212 TATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNH 260 (784)
T ss_dssp EEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHC
T ss_pred CCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHC
Confidence 357999999999999888765210 0 25789999999999988874
No 313
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=95.45 E-value=0.016 Score=53.70 Aligned_cols=49 Identities=16% Similarity=0.179 Sum_probs=37.6
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCH---HHHHHHHHHHHHhC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNK---ERVRRLKDTIKLSG 186 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~---~~l~~l~~~~~~~g 186 (337)
..+|+.|||.+||+|..+.....+ +.+.+++|+++ ..++.+++++++.|
T Consensus 240 ~~~~~~vlDpF~GsGtt~~aa~~~---~r~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 240 SHPGSTVLDFFAGSGVTARVAIQE---GRNSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp SCTTCEEEETTCTTCHHHHHHHHH---TCEEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCCCCEEEecCCCCCHHHHHHHHc---CCcEEEEECCccHHHHHHHHHHHHHHcc
Confidence 468999999999999766544444 36899999999 99999999987765
No 314
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=95.40 E-value=0.041 Score=50.60 Aligned_cols=128 Identities=16% Similarity=0.114 Sum_probs=75.0
Q ss_pred CCeEEeecCCchhHHHHHHH---HcCCCCE--EEEEeCCH--------HHHHHHHHH-HHHhC---CCc--EEEEeccCC
Q 019692 138 GWKVLDACSAPGNKTVHLAA---LMKGKGK--IVACELNK--------ERVRRLKDT-IKLSG---AAN--IEVLHGDFL 198 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~---~~~~~g~--V~avD~~~--------~~l~~l~~~-~~~~g---~~~--v~~~~~D~~ 198 (337)
.-+|||+|-|+|..++.... ..++..+ .+++|.++ ..+..+.+. +.... -.+ +++..+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 45799999999986544332 2344454 46666532 112222222 22221 122 567788987
Q ss_pred CCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCC-cEEEEEc
Q 019692 199 NLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 199 ~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
...+... ...||+|++|+= | -+++|++ | +.+++....+++++ |+++-=|
T Consensus 177 ~~l~~l~-~~~~Da~flDgF-s----P~kNPeL-W-----------------------s~e~f~~l~~~~~pgg~laTYt 226 (308)
T 3vyw_A 177 KRIKEVE-NFKADAVFHDAF-S----PYKNPEL-W-----------------------TLDFLSLIKERIDEKGYWVSYS 226 (308)
T ss_dssp HHGGGCC-SCCEEEEEECCS-C----TTTSGGG-G-----------------------SHHHHHHHHTTEEEEEEEEESC
T ss_pred HHHhhhc-ccceeEEEeCCC-C----cccCccc-C-----------------------CHHHHHHHHHHhCCCcEEEEEe
Confidence 6544332 136999999972 1 1456764 1 15788888888887 5555334
Q ss_pred CCCCcccCHHHHHHHhchhcCCCcEEec
Q 019692 278 CSIHQVENEDVIKSVLPIAMSFGFQLAT 305 (337)
Q Consensus 278 CS~~~~ENe~vv~~~l~~~~~~~~~~~~ 305 (337)
|+ ..|.+.|. ..||++..
T Consensus 227 aa-------g~VRR~L~---~aGF~V~k 244 (308)
T 3vyw_A 227 SS-------LSVRKSLL---TLGFKVGS 244 (308)
T ss_dssp CC-------HHHHHHHH---HTTCEEEE
T ss_pred Cc-------HHHHHHHH---HCCCEEEe
Confidence 44 88999885 45787754
No 315
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=95.33 E-value=0.012 Score=54.48 Aligned_cols=62 Identities=15% Similarity=0.089 Sum_probs=45.7
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL 200 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~ 200 (337)
..+|+.|||.+||+|..+.. |..+ +.+.+++|+++..++.+++++++.+.. ...++.|+.++
T Consensus 250 ~~~~~~VlDpF~GsGtt~~a-a~~~--gr~~ig~e~~~~~~~~~~~r~~~~~~~-~~~~~~~~~~i 311 (323)
T 1boo_A 250 TEPDDLVVDIFGGSNTTGLV-AERE--SRKWISFEMKPEYVAASAFRFLDNNIS-EEKITDIYNRI 311 (323)
T ss_dssp CCTTCEEEETTCTTCHHHHH-HHHT--TCEEEEEESCHHHHHHHHGGGSCSCSC-HHHHHHHHHHH
T ss_pred CCCCCEEEECCCCCCHHHHH-HHHc--CCCEEEEeCCHHHHHHHHHHHHhcccc-hHHHHHHHHHH
Confidence 46899999999999965543 3333 368999999999999999998876643 33444454443
No 316
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=94.87 E-value=0.047 Score=59.53 Aligned_cols=82 Identities=17% Similarity=0.170 Sum_probs=56.7
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCC------------CCCC-
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN------------LDPK- 203 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~-g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~------------~~~~- 203 (337)
.-+++|++||.||.++.+... +- ..|.|+|+++.+++..+.|. .+..++.+|... ....
T Consensus 851 ~l~viDLFsG~GGlslGfe~A--G~~~vv~avEid~~A~~ty~~N~-----p~~~~~~~DI~~l~~~~~~gdi~~~~~~~ 923 (1330)
T 3av4_A 851 KLRTLDVFSGCGGLSEGFHQA--GISETLWAIEMWDPAAQAFRLNN-----PGTTVFTEDCNVLLKLVMAGEVTNSLGQR 923 (1330)
T ss_dssp CEEEEEETCTTSHHHHHHHHT--TSEEEEEEECCSHHHHHHHHHHC-----TTSEEECSCHHHHHHHHTTTCSBCSSCCB
T ss_pred CceEEecccCccHHHHHHHHC--CCCceEEEEECCHHHHHHHHHhC-----CCCcEeeccHHHHhHhhhccchhhhhhhh
Confidence 457999999999999988764 21 25889999999999888874 233455555331 1111
Q ss_pred CCCCCCccEEEECCCCCCccccC
Q 019692 204 DPAYSEVRAILLDPSCSGSGTAA 226 (337)
Q Consensus 204 ~~~~~~fD~IlvDpPCSg~G~~~ 226 (337)
.+..+.+|+|+.-|||-+.....
T Consensus 924 lp~~~~vDvl~GGpPCQ~FS~ag 946 (1330)
T 3av4_A 924 LPQKGDVEMLCGGPPCQGFSGMN 946 (1330)
T ss_dssp CCCTTTCSEEEECCCCTTTCSSS
T ss_pred ccccCccceEEecCCCccccccc
Confidence 11124689999999999876543
No 317
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=94.63 E-value=0.19 Score=46.56 Aligned_cols=68 Identities=19% Similarity=0.110 Sum_probs=48.6
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCcc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD 211 (337)
..+++|++||-.|+|+ |..+.++|+.++ .+|+++|.++++++.++ ++|.+.+. .|...+. ..+|
T Consensus 172 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~v~---~~~~~~~------~~~D 236 (348)
T 3two_A 172 SKVTKGTKVGVAGFGGLGSMAVKYAVAMG--AEVSVFARNEHKKQDAL----SMGVKHFY---TDPKQCK------EELD 236 (348)
T ss_dssp TTCCTTCEEEEESCSHHHHHHHHHHHHTT--CEEEEECSSSTTHHHHH----HTTCSEEE---SSGGGCC------SCEE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----hcCCCeec---CCHHHHh------cCCC
Confidence 4788999999999876 666777887753 58999999999887664 47876543 3332221 2689
Q ss_pred EEEE
Q 019692 212 AILL 215 (337)
Q Consensus 212 ~Ilv 215 (337)
+||-
T Consensus 237 ~vid 240 (348)
T 3two_A 237 FIIS 240 (348)
T ss_dssp EEEE
T ss_pred EEEE
Confidence 8874
No 318
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=93.73 E-value=0.14 Score=45.36 Aligned_cols=85 Identities=7% Similarity=0.025 Sum_probs=60.9
Q ss_pred CCCeEEeecCCch-hHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPG-NKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G-~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~ 207 (337)
.|.++|=.|++.+ |++..+|..+ ....+|+.++.+++.++.+.+.++..+-.++.++..|..+.... ...+
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4788888887653 5666666644 23469999999999999999888887765688888998764311 1124
Q ss_pred CCccEEEECCCCCC
Q 019692 208 SEVRAILLDPSCSG 221 (337)
Q Consensus 208 ~~fD~IlvDpPCSg 221 (337)
++.|.++.++...+
T Consensus 85 G~iD~lvnnAg~~~ 98 (256)
T 4fs3_A 85 GNIDGVYHSIAFAN 98 (256)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCCEEEecccccc
Confidence 67899998876544
No 319
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=93.33 E-value=0.061 Score=54.86 Aligned_cols=129 Identities=16% Similarity=0.139 Sum_probs=74.6
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC---------C--CCEEEEEeCCHHHHHHHHHH--------------HHHh-----C
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK---------G--KGKIVACELNKERVRRLKDT--------------IKLS-----G 186 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~---------~--~g~V~avD~~~~~l~~l~~~--------------~~~~-----g 186 (337)
+.-+|+|+|-|+|...+.+.+... . .-+++++|..+-..+.+++. ++.. |
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 456899999999998888776541 1 14689999954333333332 2211 2
Q ss_pred C-----C----cEEEEeccCCCCCCCCC--CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHH
Q 019692 187 A-----A----NIEVLHGDFLNLDPKDP--AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSA 255 (337)
Q Consensus 187 ~-----~----~v~~~~~D~~~~~~~~~--~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (337)
+ . .+++..+|+.+..+... ....||.+++|+... .++|+. |+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p-----~~np~~-------------w~--------- 190 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAP-----AKNPDM-------------WN--------- 190 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC-------CCTT-------------CS---------
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCC-----CCChhh-------------hh---------
Confidence 1 1 36678888876544321 015799999998632 346664 12
Q ss_pred HHHHHHHHHhCCCCCc-EEEEEcCCCCcccCHHHHHHHhchhcCCCcEEe
Q 019692 256 FQKKALRHALSFPGVE-RVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 256 ~Q~~lL~~A~~~~~~G-~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~ 304 (337)
..++....++.++| ++..-||. ..|++.|. ..||.+.
T Consensus 191 --~~~~~~l~~~~~~g~~~~t~~~~-------~~vr~~l~---~aGf~~~ 228 (689)
T 3pvc_A 191 --EQLFNAMARMTRPGGTFSTFTAA-------GFVRRGLQ---QAGFNVT 228 (689)
T ss_dssp --HHHHHHHHHHEEEEEEEEESCCC-------HHHHHHHH---HTTCEEE
T ss_pred --HHHHHHHHHHhCCCCEEEeccCc-------HHHHHHHH---hCCeEEE
Confidence 34555555555654 44433444 46777774 3456654
No 320
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=92.74 E-value=0.16 Score=46.72 Aligned_cols=54 Identities=15% Similarity=0.123 Sum_probs=40.2
Q ss_pred HHhCCCCCCeEEeecCCchh-HHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 131 AALAPKPGWKVLDACSAPGN-KTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~G~-kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
....+++|++||=.|+|+.+ .+.++|+.+ +...++++|.++++++.++ ++|...
T Consensus 154 ~~~~~~~g~~VlV~GaG~vG~~aiq~ak~~-G~~~vi~~~~~~~k~~~a~----~lGa~~ 208 (346)
T 4a2c_A 154 HLAQGCENKNVIIIGAGTIGLLAIQCAVAL-GAKSVTAIDISSEKLALAK----SFGAMQ 208 (346)
T ss_dssp HHTTCCTTSEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred HHhccCCCCEEEEECCCCcchHHHHHHHHc-CCcEEEEEechHHHHHHHH----HcCCeE
Confidence 34567899999999988755 456667665 3457899999999887654 578754
No 321
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=92.27 E-value=0.21 Score=46.58 Aligned_cols=48 Identities=19% Similarity=0.152 Sum_probs=35.5
Q ss_pred CCCeEEeec-CCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 137 PGWKVLDAC-SAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 137 ~g~~VLDl~-aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
+|++||=.| +|+ |..+.++|+.++ ..+|+++|.++++++.++ ++|.+.
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~-g~~Vi~~~~~~~~~~~~~----~lGad~ 220 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVK----SLGAHH 220 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHC-CSEEEEECSSHHHHHHHH----HTTCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhc-CCEEEEEeCCHHHHHHHH----HcCCCE
Confidence 789999887 333 556777777643 469999999999888764 478664
No 322
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=91.72 E-value=0.38 Score=45.39 Aligned_cols=50 Identities=30% Similarity=0.389 Sum_probs=40.2
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCC
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGA 187 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~ 187 (337)
..+++|++||-.|||+ |..+.++|+.+ +..+|+++|.++++++.++ ++|.
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa 231 (398)
T 2dph_A 181 AGVKPGSHVYIAGAGPVGRCAAAGARLL-GAACVIVGDQNPERLKLLS----DAGF 231 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEEESCHHHHHHHH----TTTC
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH----HcCC
Confidence 4678999999999877 77788888876 3348999999999887654 4676
No 323
>4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus}
Probab=90.62 E-value=3.6 Score=38.66 Aligned_cols=80 Identities=21% Similarity=0.159 Sum_probs=52.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCCC-CEEEEEeCCHH---HHHHHHHHHHHhC--------CCcEEEEeccCCCCCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKE---RVRRLKDTIKLSG--------AANIEVLHGDFLNLDPKD 204 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~~-g~V~avD~~~~---~l~~l~~~~~~~g--------~~~v~~~~~D~~~~~~~~ 204 (337)
++.+||=.| |+|+.+.+++..+... .+|++++.++. ..+.+.+.++... ..++.++.+|..+...-.
T Consensus 68 ~~~~vlVTG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~ 146 (427)
T 4f6c_A 68 PLGNTLLTG-ATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV 146 (427)
T ss_dssp CCEEEEEEC-TTSHHHHHHHHHHTTTEEEEEEEEECSSHHHHHHHHHHHHHHHSCHHHHHHHHTTEEEEEECC---CCCC
T ss_pred CCCEEEEec-CCcHHHHHHHHHHHcCCCEEEEEECCCChHHHHHHHHHHHHHhccccccccccCceEEEeCCCCCcccCC
Confidence 345677555 6788998888876443 48999998876 5555655554431 146899999987744322
Q ss_pred CCCCCccEEEECCC
Q 019692 205 PAYSEVRAILLDPS 218 (337)
Q Consensus 205 ~~~~~fD~IlvDpP 218 (337)
....+|.|+..+.
T Consensus 147 -~~~~~d~Vih~A~ 159 (427)
T 4f6c_A 147 -LPENMDTIIHAGA 159 (427)
T ss_dssp -CSSCCSEEEECCC
T ss_pred -CcCCCCEEEECCc
Confidence 3567999998654
No 324
>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*
Probab=90.33 E-value=0.53 Score=43.41 Aligned_cols=78 Identities=12% Similarity=0.148 Sum_probs=53.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCC--C-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKG--K-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAI 213 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~--~-g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~I 213 (337)
.+.+||=. -|+|+.+.+++..+.. + .+|++++.++.....+.+.+. -.++.++.+|..+...-...+..+|.|
T Consensus 20 ~~k~vlVT-GatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~---~~~v~~~~~Dl~d~~~l~~~~~~~D~V 95 (344)
T 2gn4_A 20 DNQTILIT-GGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFN---DPRMRFFIGDVRDLERLNYALEGVDIC 95 (344)
T ss_dssp TTCEEEEE-TTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHC---CTTEEEEECCTTCHHHHHHHTTTCSEE
T ss_pred CCCEEEEE-CCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhc---CCCEEEEECCCCCHHHHHHHHhcCCEE
Confidence 36678744 4778899888876533 2 389999999887766655442 246899999987643211113468999
Q ss_pred EECCC
Q 019692 214 LLDPS 218 (337)
Q Consensus 214 lvDpP 218 (337)
+..+.
T Consensus 96 ih~Aa 100 (344)
T 2gn4_A 96 IHAAA 100 (344)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 98665
No 325
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=90.21 E-value=0.8 Score=43.03 Aligned_cols=51 Identities=27% Similarity=0.381 Sum_probs=39.9
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|..
T Consensus 181 ~~~~~g~~VlV~GaG~vG~~aiqlAk~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~ 232 (398)
T 1kol_A 181 AGVGPGSTVYVAGAGPVGLAAAASARLL-GAAVVIVGDLNPARLAHAK----AQGFE 232 (398)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCE
T ss_pred cCCCCCCEEEEECCcHHHHHHHHHHHHC-CCCeEEEEcCCHHHHHHHH----HcCCc
Confidence 4678999999999876 66777888875 3348999999999988764 46763
No 326
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=90.20 E-value=0.89 Score=40.99 Aligned_cols=82 Identities=10% Similarity=0.114 Sum_probs=57.0
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.++.+...++.+.+.++..+..++.++..|..+.... ...++
T Consensus 40 ~~k~vlVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 118 (293)
T 3rih_A 40 SARSVLVTG-GTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFG 118 (293)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 355666555 5667777777755 33458999999999888888877766655688999998764311 01134
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.++.++--
T Consensus 119 ~iD~lvnnAg~ 129 (293)
T 3rih_A 119 ALDVVCANAGI 129 (293)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 327
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=89.73 E-value=0.95 Score=41.48 Aligned_cols=51 Identities=20% Similarity=0.267 Sum_probs=41.0
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+|+ |..+.++|+..+ .+|+++|.++++++.++ ++|...
T Consensus 162 ~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 213 (340)
T 3s2e_A 162 TDTRPGQWVVISGIGGLGHVAVQYARAMG--LRVAAVDIDDAKLNLAR----RLGAEV 213 (340)
T ss_dssp TTCCTTSEEEEECCSTTHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCCHHHHHHHH----HcCCCE
Confidence 4678999999999876 778888888763 59999999999988654 467654
No 328
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=89.72 E-value=0.68 Score=40.69 Aligned_cols=85 Identities=8% Similarity=0.035 Sum_probs=56.6
Q ss_pred CCCeEEeecCCch-hHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPG-NKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G-~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.+||=.|++.| |.+.+++..+ ..+.+|+.++.+....+.+.+..+..+-.++.++..|..+..... ..+
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 3678887887643 4666666554 334689999999877777777776666546889999987653110 012
Q ss_pred CCccEEEECCCCCC
Q 019692 208 SEVRAILLDPSCSG 221 (337)
Q Consensus 208 ~~fD~IlvDpPCSg 221 (337)
+.+|.++..+.-..
T Consensus 86 g~id~li~~Ag~~~ 99 (266)
T 3oig_A 86 GVIHGIAHCIAFAN 99 (266)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCeeEEEEcccccc
Confidence 46899998776443
No 329
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=89.62 E-value=0.96 Score=41.83 Aligned_cols=53 Identities=30% Similarity=0.367 Sum_probs=40.8
Q ss_pred HhCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 132 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
...+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|.+.
T Consensus 166 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 219 (356)
T 1pl8_A 166 RGGVTLGHKVLVCGAGPIGMVTLLVAKAM-GAAQVVVTDLSATRLSKAK----EIGADL 219 (356)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HhCCCE
Confidence 35788999999999876 66677788775 3348999999999887664 468764
No 330
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.56 E-value=4.2 Score=35.62 Aligned_cols=66 Identities=14% Similarity=0.125 Sum_probs=49.8
Q ss_pred CeEEeecCCchhHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECC
Q 019692 139 WKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~-~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDp 217 (337)
.+||=.| + |..+.++++.+.. +..|++++.++.....+.. .+++++.+|..++. ...+|.|+.-+
T Consensus 6 ~~ilVtG-a-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-------~~~~~~~~D~~d~~-----~~~~d~vi~~a 71 (286)
T 3ius_A 6 GTLLSFG-H-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA-------SGAEPLLWPGEEPS-----LDGVTHLLIST 71 (286)
T ss_dssp CEEEEET-C-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH-------TTEEEEESSSSCCC-----CTTCCEEEECC
T ss_pred CcEEEEC-C-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh-------CCCeEEEecccccc-----cCCCCEEEECC
Confidence 5789888 5 9999998887633 3589999999876654432 35889999998854 35789999855
Q ss_pred C
Q 019692 218 S 218 (337)
Q Consensus 218 P 218 (337)
.
T Consensus 72 ~ 72 (286)
T 3ius_A 72 A 72 (286)
T ss_dssp C
T ss_pred C
Confidence 4
No 331
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=89.09 E-value=0.96 Score=42.05 Aligned_cols=52 Identities=19% Similarity=0.231 Sum_probs=40.4
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+|+ |..+.++|+.++ ..+|+++|.++++++.++ ++|.+.
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G-a~~Vi~~~~~~~~~~~a~----~lGa~~ 238 (371)
T 1f8f_A 186 LKVTPASSFVTWGAGAVGLSALLAAKVCG-ASIIIAVDIVESRLELAK----QLGATH 238 (371)
T ss_dssp TCCCTTCEEEEESCSHHHHHHHHHHHHHT-CSEEEEEESCHHHHHHHH----HHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC-CCeEEEECCCHHHHHHHH----HcCCCE
Confidence 4678999999999876 667778888763 347999999999988764 457653
No 332
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=88.95 E-value=4 Score=35.58 Aligned_cols=83 Identities=13% Similarity=0.166 Sum_probs=56.8
Q ss_pred CCCeEEeecC-CchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACS-APGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~a-G~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.+||=.|+ |. +.+.+++..+ ..+.+|+.++.+...++.+.+.++..+-.++.++..|..+..... ..+
T Consensus 21 ~~k~vlITGasg~-GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 99 (266)
T 3o38_A 21 KGKVVLVTAAAGT-GIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA 99 (266)
T ss_dssp TTCEEEESSCSSS-SHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCC-chHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence 3667887766 33 3555555543 334689999999999998888887666567999999987643110 012
Q ss_pred CCccEEEECCCCC
Q 019692 208 SEVRAILLDPSCS 220 (337)
Q Consensus 208 ~~fD~IlvDpPCS 220 (337)
+++|.++..+--+
T Consensus 100 g~id~li~~Ag~~ 112 (266)
T 3o38_A 100 GRLDVLVNNAGLG 112 (266)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 4689999876543
No 333
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=88.90 E-value=0.26 Score=44.69 Aligned_cols=78 Identities=9% Similarity=0.022 Sum_probs=42.1
Q ss_pred CcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 019692 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 267 (337)
Q Consensus 188 ~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~ 267 (337)
..++++++|..+.....+ .++||+|++|||.-........++ .. ....+..........++..+.++
T Consensus 20 ~~~~i~~gD~~~~l~~l~-~~s~DlIvtdPPY~~~~~y~~~~~----------~~--~~~~~~~~~l~~l~~~~~~~~rv 86 (297)
T 2zig_A 20 GVHRLHVGDAREVLASFP-EASVHLVVTSPPYWTLKRYEDTPG----------QL--GHIEDYEAFLDELDRVWREVFRL 86 (297)
T ss_dssp -CEEEEESCHHHHHTTSC-TTCEEEEEECCCCCCCC-----------------CC--HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCEEEECcHHHHHhhCC-CCceeEEEECCCCCCccccCCChh----------hh--cccccHHHHHHHHHHHHHHHHHH
Confidence 357899999887433222 257999999999754321111100 00 01122223334456778888888
Q ss_pred CCCcEEEEEcC
Q 019692 268 PGVERVVYSTC 278 (337)
Q Consensus 268 ~~~G~lvYsTC 278 (337)
+++|..+|..+
T Consensus 87 Lk~~G~l~i~~ 97 (297)
T 2zig_A 87 LVPGGRLVIVV 97 (297)
T ss_dssp EEEEEEEEEEE
T ss_pred cCCCcEEEEEE
Confidence 88744444333
No 334
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=88.74 E-value=1.4 Score=39.51 Aligned_cols=80 Identities=10% Similarity=0.052 Sum_probs=54.2
Q ss_pred CCCeEEeecCCch-hHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPG-NKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G-~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~ 207 (337)
.|.+||=.|++.| |.+.+++..+ ....+|+.++.++...+.+++..+..+ ++.++..|..+.... ...+
T Consensus 30 ~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (293)
T 3grk_A 30 QGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELG--AFVAGHCDVADAASIDAVFETLEKKW 107 (293)
T ss_dssp TTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHT--CEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CceEEECCCCCHHHHHHHHHHHHHhc
Confidence 5778898887754 4666666654 334689999999776666666666654 578888998764311 0113
Q ss_pred CCccEEEECCC
Q 019692 208 SEVRAILLDPS 218 (337)
Q Consensus 208 ~~fD~IlvDpP 218 (337)
+.+|.++.++-
T Consensus 108 g~iD~lVnnAG 118 (293)
T 3grk_A 108 GKLDFLVHAIG 118 (293)
T ss_dssp SCCSEEEECCC
T ss_pred CCCCEEEECCc
Confidence 57899998765
No 335
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.37 E-value=1.2 Score=39.24 Aligned_cols=81 Identities=7% Similarity=0.142 Sum_probs=57.5
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.++.+.+.++.+.+.++..+-.++.++..|..+..... ..++
T Consensus 9 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (262)
T 3pk0_A 9 QGRSVVVTG-GTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFG 87 (262)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhC
Confidence 366777555 5567777777755 334589999999999998888887776556889999987643110 1124
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.++..+-
T Consensus 88 ~id~lvnnAg 97 (262)
T 3pk0_A 88 GIDVVCANAG 97 (262)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998764
No 336
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=88.20 E-value=0.85 Score=39.79 Aligned_cols=81 Identities=10% Similarity=0.064 Sum_probs=55.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC--CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK--GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~--~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.+.+||=. -|+|+.+.+++..+. .+.+|+.++.+...++.+.+.++..+ .++.++..|..+..... ..+
T Consensus 3 ~~k~vlIT-GasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVT-GGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEG-LSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEES-SCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTT-CCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEe-CCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcC-CeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 35567744 467888888887653 34689999999988888877777665 34788889987643110 012
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.|+..+-.
T Consensus 81 g~id~li~~Ag~ 92 (276)
T 1wma_A 81 GGLDVLVNNAGI 92 (276)
T ss_dssp SSEEEEEECCCC
T ss_pred CCCCEEEECCcc
Confidence 368999987653
No 337
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=88.15 E-value=3.1 Score=35.96 Aligned_cols=81 Identities=11% Similarity=0.136 Sum_probs=57.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.+||=.|+ +|+.+.+++..+. .+.+|+.+|.+.+.++.+.+.++..+ .++.++..|..+..... ..++
T Consensus 8 ~~k~vlITGa-s~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 8 ENKVGIVTGS-GGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADG-GTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3667776664 5667777777653 34689999999999999888887765 35888899987643110 0124
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.++..+--
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999987753
No 338
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=87.98 E-value=2.1 Score=40.29 Aligned_cols=81 Identities=11% Similarity=0.084 Sum_probs=56.4
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCC--CEEEEEeCCHHHHHHHHHHHHHhCC---CcEEEEeccCCCCCCCC--CCCCCc
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGK--GKIVACELNKERVRRLKDTIKLSGA---ANIEVLHGDFLNLDPKD--PAYSEV 210 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~--g~V~avD~~~~~l~~l~~~~~~~g~---~~v~~~~~D~~~~~~~~--~~~~~f 210 (337)
+.+||=.| |+|+.+.++++.+... ..|++++.++..+..+.+.+....- .++.++.+|..+..... .....+
T Consensus 35 ~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~~ 113 (399)
T 3nzo_A 35 QSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQY 113 (399)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCCC
T ss_pred CCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCCC
Confidence 66787555 6788999988876444 4899999999988877777655421 46899999987643110 012468
Q ss_pred cEEEECCCC
Q 019692 211 RAILLDPSC 219 (337)
Q Consensus 211 D~IlvDpPC 219 (337)
|.|+.-+..
T Consensus 114 D~Vih~Aa~ 122 (399)
T 3nzo_A 114 DYVLNLSAL 122 (399)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCc
Confidence 999986543
No 339
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=87.40 E-value=1.1 Score=41.21 Aligned_cols=54 Identities=26% Similarity=0.165 Sum_probs=40.0
Q ss_pred HHhCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 131 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
....+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|...
T Consensus 160 ~~~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 214 (352)
T 3fpc_A 160 ELANIKLGDTVCVIGIGPVGLMSVAGANHL-GAGRIFAVGSRKHCCDIAL----EYGATD 214 (352)
T ss_dssp HHTTCCTTCCEEEECCSHHHHHHHHHHHTT-TCSSEEEECCCHHHHHHHH----HHTCCE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCcEEEEECCCHHHHHHHH----HhCCce
Confidence 345688999999998876 55667777764 3347999999999887664 467653
No 340
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=87.37 E-value=1.7 Score=39.85 Aligned_cols=52 Identities=19% Similarity=0.166 Sum_probs=38.7
Q ss_pred hCCCCCCeEEeecCCchh-HHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAPGN-KTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~G~-kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||=.|+|+++ .+.++++.+. ..+|+++|.++++++.++ ++|...
T Consensus 159 ~~~~~g~~VlV~GaG~~g~~a~~~a~~~~-g~~Vi~~~~~~~r~~~~~----~~Ga~~ 211 (348)
T 4eez_A 159 SGVKPGDWQVIFGAGGLGNLAIQYAKNVF-GAKVIAVDINQDKLNLAK----KIGADV 211 (348)
T ss_dssp HTCCTTCEEEEECCSHHHHHHHHHHHHTS-CCEEEEEESCHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEEcCCCccHHHHHHHHHhC-CCEEEEEECcHHHhhhhh----hcCCeE
Confidence 467899999999998865 4555565543 479999999999876544 567653
No 341
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=87.36 E-value=0.56 Score=47.48 Aligned_cols=130 Identities=15% Similarity=0.144 Sum_probs=74.7
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC---------CC--CEEEEEeC---CHHHHHHHH-----------HHHHHh-----C
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK---------GK--GKIVACEL---NKERVRRLK-----------DTIKLS-----G 186 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~---------~~--g~V~avD~---~~~~l~~l~-----------~~~~~~-----g 186 (337)
+.-+|+|+|-|+|...+...+... .. -+++++|. +.+-++.+- +.++.. |
T Consensus 66 ~~~~i~e~gfG~Gln~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 145 (676)
T 3ps9_A 66 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 145 (676)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHHCCCCCSE
T ss_pred CceEEEEeCCchHHHHHHHHHHHHHhhhhCcCCCCceEEEEEEeCCCCCHHHHHHHHHhChhhHHHHHHHHHhCcccCCC
Confidence 345899999999998777665531 11 35899999 666665221 222222 1
Q ss_pred C---------CcEEEEeccCCCCCCCCC--CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHH
Q 019692 187 A---------ANIEVLHGDFLNLDPKDP--AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSA 255 (337)
Q Consensus 187 ~---------~~v~~~~~D~~~~~~~~~--~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~ 255 (337)
+ -.+++..+|+.+..+... ....||.|++|+-.. .++|+. |+
T Consensus 146 ~~~~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~d~~~~D~f~p-----~~np~~-------------w~--------- 198 (676)
T 3ps9_A 146 CHRLLLDAGRVTLDLWFGDINELTSQLDDSLNQKVDAWFLDGFAP-----AKNPDM-------------WT--------- 198 (676)
T ss_dssp EEEEEEGGGTEEEEEEESCHHHHGGGBCGGGTTCEEEEEECCSCG-----GGCGGG-------------SC---------
T ss_pred ceEEEecCCcEEEEEecCCHHHHHHhcccccCCcccEEEECCCCC-----cCChhh-------------hh---------
Confidence 1 125566677765433221 014699999998522 356664 12
Q ss_pred HHHHHHHHHhCCCCCcEEEEEcCCCCcccCHHHHHHHhchhcCCCcEEe
Q 019692 256 FQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSVLPIAMSFGFQLA 304 (337)
Q Consensus 256 ~Q~~lL~~A~~~~~~G~lvYsTCS~~~~ENe~vv~~~l~~~~~~~~~~~ 304 (337)
..++....+++++|..+.|.|+. ..|++.|.. .||.+.
T Consensus 199 --~~~~~~l~~~~~~g~~~~t~~~~------~~vr~~L~~---aGf~v~ 236 (676)
T 3ps9_A 199 --QNLFNAMARLARPGGTLATFTSA------GFVRRGLQD---AGFTMQ 236 (676)
T ss_dssp --HHHHHHHHHHEEEEEEEEESCCC------HHHHHHHHH---HTCEEE
T ss_pred --HHHHHHHHHHhCCCCEEEeccCc------HHHHHHHHh---CCeEEE
Confidence 34566666666665555444442 567777743 355553
No 342
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=87.09 E-value=0.41 Score=43.53 Aligned_cols=81 Identities=11% Similarity=-0.001 Sum_probs=50.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCC--CCccEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAY--SEVRAIL 214 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~--~~fD~Il 214 (337)
+.+||=.| |+|+.+.+++..+. .+.+|++++.+........+.+....-.++.++.+|..+...-.... ..+|.|+
T Consensus 5 ~~~vlVTG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi 83 (341)
T 3enk_A 5 KGTILVTG-GAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI 83 (341)
T ss_dssp SCEEEEET-TTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred CcEEEEec-CCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence 45777444 77888888887653 34689999987665554444444432245888899987643111001 2589999
Q ss_pred ECCCC
Q 019692 215 LDPSC 219 (337)
Q Consensus 215 vDpPC 219 (337)
..+..
T Consensus 84 h~A~~ 88 (341)
T 3enk_A 84 HFAAL 88 (341)
T ss_dssp ECCCC
T ss_pred ECccc
Confidence 86653
No 343
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=87.07 E-value=1.3 Score=41.23 Aligned_cols=51 Identities=25% Similarity=0.261 Sum_probs=39.7
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
+.+++|++||-.|+|+ |..+.++|+.+ ..+|+++|.++++++.+++ +|...
T Consensus 190 ~~~~~g~~VlV~GaG~vG~~aiqlak~~--Ga~Vi~~~~~~~~~~~a~~----lGa~~ 241 (369)
T 1uuf_A 190 WQAGPGKKVGVVGIGGLGHMGIKLAHAM--GAHVVAFTTSEAKREAAKA----LGADE 241 (369)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH----cCCcE
Confidence 3688999999999875 66677777775 2579999999998887653 67654
No 344
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=87.06 E-value=3.8 Score=36.07 Aligned_cols=81 Identities=9% Similarity=0.099 Sum_probs=55.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELN------------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 203 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~------------~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 203 (337)
.|.+||=.|++ |+.+.+++..+ ..+.+|+.+|.+ .+.++.+...++..|. ++.++..|..+....
T Consensus 9 ~gk~vlVTGas-~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 9 QDKVVLVTGGA-RGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGR-KAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeCCC-ChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCC-ceEEEEccCCCHHHH
Confidence 36677766654 56777777655 334689999987 7788888777777663 588899998764311
Q ss_pred C-------CCCCCccEEEECCCC
Q 019692 204 D-------PAYSEVRAILLDPSC 219 (337)
Q Consensus 204 ~-------~~~~~fD~IlvDpPC 219 (337)
. ..++.+|.++..+--
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGI 109 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCc
Confidence 0 012468999987753
No 345
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=87.03 E-value=1.7 Score=40.02 Aligned_cols=52 Identities=23% Similarity=0.169 Sum_probs=39.7
Q ss_pred HhCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 132 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
...+++|++||-.|+|+ |..+.++|+.++ .+|+++|.++++++.++ .+|.+.
T Consensus 163 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 215 (352)
T 1e3j_A 163 RAGVQLGTTVLVIGAGPIGLVSVLAAKAYG--AFVVCTARSPRRLEVAK----NCGADV 215 (352)
T ss_dssp HHTCCTTCEEEEECCSHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HTTCSE
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEcCCHHHHHHHH----HhCCCE
Confidence 35788999999999865 556777777653 46999999999988764 467763
No 346
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=86.98 E-value=0.47 Score=43.79 Aligned_cols=47 Identities=19% Similarity=0.249 Sum_probs=33.8
Q ss_pred CCCeEEeec-CC-chhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 137 PGWKVLDAC-SA-PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 137 ~g~~VLDl~-aG-~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
+|++||=.| +| .|..+.++++.. + .+|++++.++++++.+++ +|.+.
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~-G-a~Vi~~~~~~~~~~~~~~----lGa~~ 198 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAY-G-LRVITTASRNETIEWTKK----MGADI 198 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHT-T-CEEEEECCSHHHHHHHHH----HTCSE
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHc-C-CEEEEEeCCHHHHHHHHh----cCCcE
Confidence 899999773 33 355566677764 2 599999999998887664 67653
No 347
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=86.76 E-value=1.5 Score=40.12 Aligned_cols=51 Identities=16% Similarity=0.293 Sum_probs=40.5
Q ss_pred CCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 134 APKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
.+++|++||-.|+|+ |..+.++|+.++ ..+|+++|.++++++.++ ++|.+.
T Consensus 168 ~~~~g~~vlv~GaG~vG~~a~qla~~~g-~~~Vi~~~~~~~~~~~~~----~lGa~~ 219 (345)
T 3jv7_A 168 LLGPGSTAVVIGVGGLGHVGIQILRAVS-AARVIAVDLDDDRLALAR----EVGADA 219 (345)
T ss_dssp GCCTTCEEEEECCSHHHHHHHHHHHHHC-CCEEEEEESCHHHHHHHH----HTTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcC-CCEEEEEcCCHHHHHHHH----HcCCCE
Confidence 578999999999876 666777887763 469999999999988764 468764
No 348
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=86.75 E-value=5 Score=36.33 Aligned_cols=82 Identities=10% Similarity=0.184 Sum_probs=58.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCC-cEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAA-NIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~-~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.+||=.|++ |+.+.+++..+ ..+.+|++++.+...++.+.+.++..+.. ++.++..|..+..... ..+
T Consensus 7 ~~k~vlVTGas-~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 85 (319)
T 3ioy_A 7 AGRTAFVTGGA-NGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF 85 (319)
T ss_dssp TTCEEEEETTT-STHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEcCCc-hHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC
Confidence 36678866654 66788877765 33468999999999999988888777642 5889999987643110 113
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.++.++--
T Consensus 86 g~id~lv~nAg~ 97 (319)
T 3ioy_A 86 GPVSILCNNAGV 97 (319)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 568999987753
No 349
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=86.58 E-value=3.2 Score=36.33 Aligned_cols=81 Identities=10% Similarity=0.093 Sum_probs=56.0
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKL-SGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~-~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
|..+|=.|++ |+.+.+++..+ ..+.+|+.++.+...++.+.+.+.. .+-.++.++..|..+..... ..++
T Consensus 8 ~k~~lVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 8 EAVAVVTGGS-SGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TCEEEEETCS-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEeCCC-ChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 6677766654 55777777654 3346899999999999888888776 44445889999987643110 1124
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.++..+--
T Consensus 87 ~id~lvnnAg~ 97 (265)
T 3lf2_A 87 CASILVNNAGQ 97 (265)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 350
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=86.12 E-value=0.77 Score=34.48 Aligned_cols=72 Identities=14% Similarity=0.154 Sum_probs=44.9
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCC--CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGK--GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~--g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
+.+|+=+|+ |+.+..++..+... .+|+++|.++..++.+. .. ++.++..|..+..........+|.|+.
T Consensus 5 ~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~---~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 5 RWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM---GVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp CEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT---TCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred cCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC---CCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 567888887 66666666654322 58999999998877655 22 355666776543211011246899997
Q ss_pred CCC
Q 019692 216 DPS 218 (337)
Q Consensus 216 DpP 218 (337)
-.|
T Consensus 76 ~~~ 78 (118)
T 3ic5_A 76 AAP 78 (118)
T ss_dssp CSC
T ss_pred CCC
Confidence 554
No 351
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=86.08 E-value=1.2 Score=40.45 Aligned_cols=80 Identities=14% Similarity=0.062 Sum_probs=48.9
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhC----CCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSG----AANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g----~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
+.+||=.| |+|..+.+++..+ ..+..|++++.+..........+.... ..+++++.+|..+...-......+|.
T Consensus 25 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 103 (351)
T 3ruf_A 25 PKTWLITG-VAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH 103 (351)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence 56888554 7888888888765 334689999985443222222222221 14689999998764321111246899
Q ss_pred EEECCC
Q 019692 213 ILLDPS 218 (337)
Q Consensus 213 IlvDpP 218 (337)
|+.-+.
T Consensus 104 Vih~A~ 109 (351)
T 3ruf_A 104 VLHQAA 109 (351)
T ss_dssp EEECCC
T ss_pred EEECCc
Confidence 998554
No 352
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=85.98 E-value=4.9 Score=36.01 Aligned_cols=82 Identities=11% Similarity=0.146 Sum_probs=58.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.+||=.|++ |+.+.+++..+ ..+.+|+.++.+...++.+.+.++..|. ++.++..|..+..... ..++
T Consensus 30 ~gk~vlVTGas-~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 107 (301)
T 3tjr_A 30 DGRAAVVTGGA-SGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGF-DAHGVVCDVRHLDEMVRLADEAFRLLG 107 (301)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-ceEEEEccCCCHHHHHHHHHHHHHhCC
Confidence 57788866655 66777777655 3346899999999999998888887764 4888899987643110 0124
Q ss_pred CccEEEECCCCC
Q 019692 209 EVRAILLDPSCS 220 (337)
Q Consensus 209 ~fD~IlvDpPCS 220 (337)
.+|.++.++--.
T Consensus 108 ~id~lvnnAg~~ 119 (301)
T 3tjr_A 108 GVDVVFSNAGIV 119 (301)
T ss_dssp SCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689999977543
No 353
>2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A
Probab=85.76 E-value=1.9 Score=38.95 Aligned_cols=78 Identities=5% Similarity=0.055 Sum_probs=46.1
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHH--HHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLK--DTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~--~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+.+||=. -|+|..+.+++..+. .+..|+++..+......+. ..+. ...+++++.+|..+...-...+..+|.|+
T Consensus 9 ~~~vlVT-GatGfIG~~l~~~Ll~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~~~Dl~d~~~~~~~~~~~D~Vi 85 (338)
T 2rh8_A 9 KKTACVV-GGTGFVASLLVKLLLQKGYAVNTTVRDPDNQKKVSHLLELQ--ELGDLKIFRADLTDELSFEAPIAGCDFVF 85 (338)
T ss_dssp CCEEEEE-CTTSHHHHHHHHHHHHTTCEEEEEESCTTCTTTTHHHHHHG--GGSCEEEEECCTTTSSSSHHHHTTCSEEE
T ss_pred CCEEEEE-CCchHHHHHHHHHHHHCCCEEEEEEcCcchhhhHHHHHhcC--CCCcEEEEecCCCChHHHHHHHcCCCEEE
Confidence 5678744 488999999887653 3357888777654321111 1121 11358889999876432211123579998
Q ss_pred ECCC
Q 019692 215 LDPS 218 (337)
Q Consensus 215 vDpP 218 (337)
.-+.
T Consensus 86 h~A~ 89 (338)
T 2rh8_A 86 HVAT 89 (338)
T ss_dssp EESS
T ss_pred EeCC
Confidence 7653
No 354
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=85.72 E-value=0.66 Score=42.63 Aligned_cols=75 Identities=9% Similarity=0.005 Sum_probs=44.7
Q ss_pred CcEEEEeccCCCCCCCCCCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 019692 188 ANIEVLHGDFLNLDPKDPAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 267 (337)
Q Consensus 188 ~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~ 267 (337)
..+.++++|..+.....+ .++||+|++|||...... . + + + ..............|..+.++
T Consensus 13 ~~~~ii~gD~~~~l~~l~-~~svDlI~tDPPY~~~~~--~--~--y---------~---~~~~~~~~~~l~~~l~~~~rv 73 (323)
T 1boo_A 13 SNGSMYIGDSLELLESFP-EESISLVMTSPPFALQRK--K--E--Y---------G---NLEQHEYVDWFLSFAKVVNKK 73 (323)
T ss_dssp SSEEEEESCHHHHGGGSC-SSCEEEEEECCCCSSSCS--C--S--S---------C---SCHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEeCcHHHHHhhCC-CCCeeEEEECCCCCCCcc--c--c--c---------C---CcCHHHHHHHHHHHHHHHHHH
Confidence 347889999875432221 257999999999753210 0 0 0 0 112334455566778888888
Q ss_pred CCCcEEEEEcCCCC
Q 019692 268 PGVERVVYSTCSIH 281 (337)
Q Consensus 268 ~~~G~lvYsTCS~~ 281 (337)
+++|..+|..|.-.
T Consensus 74 Lk~~G~i~i~~~d~ 87 (323)
T 1boo_A 74 LKPDGSFVVDFGGA 87 (323)
T ss_dssp EEEEEEEEEEECCC
T ss_pred CcCCcEEEEEECCE
Confidence 88855555555533
No 355
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=85.63 E-value=2.3 Score=39.59 Aligned_cols=54 Identities=24% Similarity=0.188 Sum_probs=41.0
Q ss_pred HHhCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 131 AALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 131 ~~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
....+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|...
T Consensus 176 ~~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 230 (370)
T 4ej6_A 176 DLSGIKAGSTVAILGGGVIGLLTVQLARLA-GATTVILSTRQATKRRLAE----EVGATA 230 (370)
T ss_dssp HHHTCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred HhcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HcCCCE
Confidence 446788999999999876 55677777775 3348999999999887665 467754
No 356
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=85.36 E-value=1.9 Score=39.83 Aligned_cols=49 Identities=22% Similarity=0.263 Sum_probs=38.2
Q ss_pred HhCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHH
Q 019692 132 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDT 181 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~ 181 (337)
...+++|++||=.|+|+ |..+.++|+.+ +...|+++|.++++++.+++.
T Consensus 174 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 174 RAGVRLGDPVLICGAGPIGLITMLCAKAA-GACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp HHTCCTTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEEESCHHHHHHHHHH
T ss_pred HcCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHHh
Confidence 35788999999998866 55677788775 333599999999999887754
No 357
>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}
Probab=85.25 E-value=1 Score=38.18 Aligned_cols=71 Identities=17% Similarity=0.120 Sum_probs=48.5
Q ss_pred eEEeecCCchhHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCC-CCCCCCCCCCccEEEECC
Q 019692 140 KVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLN-LDPKDPAYSEVRAILLDP 217 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~~-g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~-~~~~~~~~~~fD~IlvDp 217 (337)
+||=.| |+|+.+.++++.+... .+|++++.++..+... .+++++.+|..+ ...-...+..+|.|+..+
T Consensus 2 ~ilItG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---------~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~a 71 (219)
T 3dqp_A 2 KIFIVG-STGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---------NNVKAVHFDVDWTPEEMAKQLHGMDAIINVS 71 (219)
T ss_dssp EEEEES-TTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---------TTEEEEECCTTSCHHHHHTTTTTCSEEEECC
T ss_pred eEEEEC-CCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---------CCceEEEecccCCHHHHHHHHcCCCEEEECC
Confidence 456444 6788999988876443 5899999997654322 468999999987 321112245799999866
Q ss_pred CCC
Q 019692 218 SCS 220 (337)
Q Consensus 218 PCS 220 (337)
.-+
T Consensus 72 g~~ 74 (219)
T 3dqp_A 72 GSG 74 (219)
T ss_dssp CCT
T ss_pred cCC
Confidence 543
No 358
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=84.69 E-value=2.5 Score=38.74 Aligned_cols=51 Identities=14% Similarity=-0.022 Sum_probs=38.7
Q ss_pred CCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 134 APKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
.+ +|++||-.|+|+ |..+.++|+.+.+..+|+++|.++++++.+++ +|.+.
T Consensus 168 ~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~ 219 (344)
T 2h6e_A 168 KF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFALE----LGADY 219 (344)
T ss_dssp TC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHHH----HTCSE
T ss_pred CC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHHH----hCCCE
Confidence 77 999999999865 55677777776212589999999998877653 67654
No 359
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=84.55 E-value=1.7 Score=40.27 Aligned_cols=52 Identities=15% Similarity=0.156 Sum_probs=39.6
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|.+.
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 239 (373)
T 1p0f_A 187 AKVTPGSTCAVFGLGGVGFSAIVGCKAA-GASRIIGVGTHKDKFPKAI----ELGATE 239 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEECCCHHHHHHHH----HcCCcE
Confidence 4678999999999865 55677777775 3348999999999887664 568754
No 360
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=84.49 E-value=5.8 Score=34.45 Aligned_cols=81 Identities=9% Similarity=0.151 Sum_probs=55.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC-
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY- 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~- 207 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.++.+++.++.+.+.++..| .++.++..|..+..... ..+
T Consensus 8 ~~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 85 (260)
T 2ae2_A 8 EGCTALVTG-GSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKG-FKVEASVCDLSSRSERQELMNTVANHFH 85 (260)
T ss_dssp TTCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 366777666 5667777777654 334689999999998887777776655 35888889987642110 012
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.++..+--
T Consensus 86 g~id~lv~~Ag~ 97 (260)
T 2ae2_A 86 GKLNILVNNAGI 97 (260)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987653
No 361
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=84.40 E-value=10 Score=33.11 Aligned_cols=80 Identities=18% Similarity=0.150 Sum_probs=55.5
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
+.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.++..|. .++.++..|..+..... ..++
T Consensus 32 ~k~vlVTG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 32 DRLALVTG-ASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 56777555 5677888777755 3346899999999998888888877765 35888889987643110 0123
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.|+..+.
T Consensus 111 ~iD~vi~~Ag 120 (279)
T 1xg5_A 111 GVDICINNAG 120 (279)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998654
No 362
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.29 E-value=3.6 Score=35.37 Aligned_cols=79 Identities=13% Similarity=0.149 Sum_probs=54.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
+.+||=.| |+|+.+.+++..+. .+.+|++++.++..++.+.+.++..+. ++.++..|..+...-. ..++.
T Consensus 11 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 88 (255)
T 1fmc_A 11 GKCAIITG-AGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGG-QAFACRCDITSEQELSALADFAISKLGK 88 (255)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCC-ceEEEEcCCCCHHHHHHHHHHHHHhcCC
Confidence 56777554 67888888887653 345899999999888887777776653 5888889987643110 00236
Q ss_pred ccEEEECCC
Q 019692 210 VRAILLDPS 218 (337)
Q Consensus 210 fD~IlvDpP 218 (337)
+|.|+..+.
T Consensus 89 ~d~vi~~Ag 97 (255)
T 1fmc_A 89 VDILVNNAG 97 (255)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998664
No 363
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=84.24 E-value=6.5 Score=34.48 Aligned_cols=80 Identities=13% Similarity=0.207 Sum_probs=55.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC-
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY- 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~- 207 (337)
.|.++|=.|+ +|+.+.+++..+. .+.+|+.++.++..++.+.+.++..|. ++.++..|..+..... ..+
T Consensus 20 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 20 KGTTALVTGG-SKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGL-NVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp TTCEEEEESC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCEEEEECC-cchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 3667776664 5667777777553 346899999999988887777766653 4888889987643110 012
Q ss_pred CCccEEEECCC
Q 019692 208 SEVRAILLDPS 218 (337)
Q Consensus 208 ~~fD~IlvDpP 218 (337)
+.+|.++..+-
T Consensus 98 g~id~lv~nAg 108 (273)
T 1ae1_A 98 GKLNILVNNAG 108 (273)
T ss_dssp SCCCEEEECCC
T ss_pred CCCcEEEECCC
Confidence 56899998765
No 364
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=84.20 E-value=8.7 Score=33.88 Aligned_cols=80 Identities=14% Similarity=0.092 Sum_probs=57.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.|..+|=.|++ +|.+..++..+ ....+|+.+|.+++.++.+.+.++..|. ++..+..|..+.... ...++
T Consensus 8 ~gKvalVTGas-~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 8 TGKTALVTGSA-RGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGY-DAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 36777766655 55677776655 3346999999999999999988888874 478888898764311 12357
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
+.|.++.++-
T Consensus 86 ~iDiLVNNAG 95 (255)
T 4g81_D 86 HVDILINNAG 95 (255)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 8999998774
No 365
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=84.18 E-value=1.9 Score=39.96 Aligned_cols=52 Identities=23% Similarity=0.297 Sum_probs=39.3
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|.+.
T Consensus 188 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 240 (374)
T 1cdo_A 188 AKVEPGSTCAVFGLGAVGLAAVMGCHSA-GAKRIIAVDLNPDKFEKAK----VFGATD 240 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCCE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEEcCCHHHHHHHH----HhCCce
Confidence 4678999999999765 55677777765 3348999999999988764 467753
No 366
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=84.14 E-value=6.5 Score=34.43 Aligned_cols=81 Identities=21% Similarity=0.142 Sum_probs=56.5
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.+.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.++..|. ++.++..|..+...- ...++
T Consensus 30 ~~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~g 107 (272)
T 1yb1_A 30 TGEIVLITG-AGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGA-KVHTFVVDCSNREDIYSSAKKVKAEIG 107 (272)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCC-eEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 366777665 5677888887765 3346899999999988888877777663 588899998764311 01124
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.|+..+-.
T Consensus 108 ~iD~li~~Ag~ 118 (272)
T 1yb1_A 108 DVSILVNNAGV 118 (272)
T ss_dssp CCSEEEECCCC
T ss_pred CCcEEEECCCc
Confidence 68999987653
No 367
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=84.10 E-value=6.7 Score=33.29 Aligned_cols=72 Identities=19% Similarity=0.276 Sum_probs=48.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcE-EEEeccCCCCCCCCCCCCCccEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANI-EVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v-~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
.|.+||=.| |+|+.+.+++..+. .+.+|++++.++..++.+.. . ++ .++.+|.. ..-...+..+|.|+
T Consensus 20 ~~~~ilVtG-atG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~----~---~~~~~~~~Dl~--~~~~~~~~~~D~vi 89 (236)
T 3e8x_A 20 QGMRVLVVG-ANGKVARYLLSELKNKGHEPVAMVRNEEQGPELRE----R---GASDIVVANLE--EDFSHAFASIDAVV 89 (236)
T ss_dssp -CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH----T---TCSEEEECCTT--SCCGGGGTTCSEEE
T ss_pred CCCeEEEEC-CCChHHHHHHHHHHhCCCeEEEEECChHHHHHHHh----C---CCceEEEcccH--HHHHHHHcCCCEEE
Confidence 367888555 67888888877653 34689999999887665432 2 46 78899987 21112245789999
Q ss_pred ECCC
Q 019692 215 LDPS 218 (337)
Q Consensus 215 vDpP 218 (337)
..+.
T Consensus 90 ~~ag 93 (236)
T 3e8x_A 90 FAAG 93 (236)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 8665
No 368
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=84.06 E-value=7.1 Score=34.10 Aligned_cols=81 Identities=12% Similarity=0.087 Sum_probs=55.4
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCCCC---CCCCCCccE
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLDPK---DPAYSEVRA 212 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~~~---~~~~~~fD~ 212 (337)
|.++|=.| |+|+.+.+++..+ ..+.+|+.+|.+...++.+.+.+...+. ..+.++..|..+.... ...++.+|.
T Consensus 10 ~k~~lVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~ 88 (267)
T 3t4x_A 10 GKTALVTG-STAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI 88 (267)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence 56777555 5566777777754 3346899999999998888887776643 3477888887653210 012357899
Q ss_pred EEECCCC
Q 019692 213 ILLDPSC 219 (337)
Q Consensus 213 IlvDpPC 219 (337)
++..+--
T Consensus 89 lv~nAg~ 95 (267)
T 3t4x_A 89 LINNLGI 95 (267)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9987653
No 369
>2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus}
Probab=84.03 E-value=1.6 Score=36.41 Aligned_cols=72 Identities=14% Similarity=0.135 Sum_probs=48.4
Q ss_pred eEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC---CCCccEEEEC
Q 019692 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA---YSEVRAILLD 216 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~---~~~fD~IlvD 216 (337)
+||=.| |+|+.+.+++..+... +|++++.++..++.+.+.+. . .++..|..+...-... ++.+|.|+..
T Consensus 2 ~vlVtG-asg~iG~~la~~l~~~-~V~~~~r~~~~~~~~~~~~~-----~-~~~~~D~~~~~~~~~~~~~~~~id~vi~~ 73 (207)
T 2yut_A 2 RVLITG-ATGGLGGAFARALKGH-DLLLSGRRAGALAELAREVG-----A-RALPADLADELEAKALLEEAGPLDLLVHA 73 (207)
T ss_dssp EEEEET-TTSHHHHHHHHHTTTS-EEEEECSCHHHHHHHHHHHT-----C-EECCCCTTSHHHHHHHHHHHCSEEEEEEC
T ss_pred EEEEEc-CCcHHHHHHHHHHHhC-CEEEEECCHHHHHHHHHhcc-----C-cEEEeeCCCHHHHHHHHHhcCCCCEEEEC
Confidence 345444 6788999999988777 99999999888776655442 1 6777887654311000 1368999986
Q ss_pred CCC
Q 019692 217 PSC 219 (337)
Q Consensus 217 pPC 219 (337)
+.-
T Consensus 74 ag~ 76 (207)
T 2yut_A 74 VGK 76 (207)
T ss_dssp CCC
T ss_pred CCc
Confidence 653
No 370
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=83.93 E-value=2.6 Score=36.87 Aligned_cols=120 Identities=10% Similarity=0.172 Sum_probs=71.8
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.++|=.|+ +|+.+.+++..+ ..+.+|+.++.+++.++.+.+.+ + .++.++..|..+..... ..++
T Consensus 7 ~gk~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 7 QGKKAIVIGG-THGMGLATVRRLVEGGAEVLLTGRNESNIARIREEF---G-PRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 4677886665 456777777654 33469999999998887766554 3 35888999987653110 1134
Q ss_pred CccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHH----HHHHHHHHHhCCCC-CcEEEEEcC
Q 019692 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSA----FQKKALRHALSFPG-VERVVYSTC 278 (337)
Q Consensus 209 ~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~----~Q~~lL~~A~~~~~-~G~lvYsTC 278 (337)
.+|.++..+-.+..+.+. ..+.++..+.-+ -...+++.++..++ .|.+|+.+.
T Consensus 82 ~id~lv~nAg~~~~~~~~-----------------~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS 139 (255)
T 4eso_A 82 AIDLLHINAGVSELEPFD-----------------QVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSS 139 (255)
T ss_dssp SEEEEEECCCCCCCBCGG-----------------GCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECC
T ss_pred CCCEEEECCCCCCCCChh-----------------hCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECC
Confidence 789999877544322111 013444433332 23445666666544 378887643
No 371
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=83.91 E-value=2 Score=39.94 Aligned_cols=52 Identities=21% Similarity=0.272 Sum_probs=39.1
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|.+.
T Consensus 191 ~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 243 (376)
T 1e3i_A 191 AKVTPGSTCAVFGLGCVGLSAIIGCKIA-GASRIIAIDINGEKFPKAK----ALGATD 243 (376)
T ss_dssp SCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCcE
Confidence 4678999999999765 55667777765 3348999999999887654 467753
No 372
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=83.78 E-value=2.4 Score=38.05 Aligned_cols=82 Identities=12% Similarity=0.065 Sum_probs=55.0
Q ss_pred CCCeEEeecCCc-hhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAP-GNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~-G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.+||=.|++. .+.+..++..+ ..+.+|+.++.+++..+.+.+..+..+ .+.++..|..+..... ..+
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~--~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLG--VKLTVPCDVSDAESVDNMFKVLAEEW 106 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHT--CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcC--CeEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467888888764 46777766654 334689999999877777776666665 3578888987643110 112
Q ss_pred CCccEEEECCCCC
Q 019692 208 SEVRAILLDPSCS 220 (337)
Q Consensus 208 ~~fD~IlvDpPCS 220 (337)
+.+|.++..+--.
T Consensus 107 g~iD~lVnnAG~~ 119 (296)
T 3k31_A 107 GSLDFVVHAVAFS 119 (296)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 4689999877543
No 373
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=83.76 E-value=2.1 Score=39.76 Aligned_cols=52 Identities=17% Similarity=0.216 Sum_probs=39.1
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|...
T Consensus 187 ~~~~~g~~VlV~GaG~vG~~a~qla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 239 (374)
T 2jhf_A 187 AKVTQGSTCAVFGLGGVGLSVIMGCKAA-GAARIIGVDINKDKFAKAK----EVGATE 239 (374)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCGGGHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HhCCce
Confidence 4678999999999765 55667777765 3348999999999887664 567653
No 374
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=83.72 E-value=4 Score=36.01 Aligned_cols=80 Identities=11% Similarity=0.144 Sum_probs=55.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.+.+||=.|+ +|+.+.+++..+. .+.+|++++.++..++.+.+.++..|. ++.++..|..+.... ...++
T Consensus 21 ~~k~vlVTGa-s~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 98 (277)
T 2rhc_B 21 DSEVALVTGA-TSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGV-EADGRTCDVRSVPEIEALVAAVVERYG 98 (277)
T ss_dssp TSCEEEEETC-SSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 3567776664 5677777777553 345899999999988887777776663 488888998764311 01134
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.++..+-
T Consensus 99 ~iD~lv~~Ag 108 (277)
T 2rhc_B 99 PVDVLVNNAG 108 (277)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998765
No 375
>2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A*
Probab=83.50 E-value=2.9 Score=37.73 Aligned_cols=78 Identities=13% Similarity=0.081 Sum_probs=46.4
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCC--CcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGA--ANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~--~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
+.+|| +.-|+|+.+.+++..+. .+.+|+++..+......+.... .+.- .+++++.+|..+...-......+|.|+
T Consensus 5 ~~~vl-VTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~Vi 82 (337)
T 2c29_D 5 SETVC-VTGASGFIGSWLVMRLLERGYTVRATVRDPTNVKKVKHLL-DLPKAETHLTLWKADLADEGSFDEAIKGCTGVF 82 (337)
T ss_dssp -CEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESCTTCHHHHHHHH-TSTTHHHHEEEEECCTTSTTTTHHHHTTCSEEE
T ss_pred CCEEE-EECCchHHHHHHHHHHHHCCCEEEEEECCcchhHHHHHHH-hcccCCCeEEEEEcCCCCHHHHHHHHcCCCEEE
Confidence 56777 55588999999887653 3358998887765333222211 1110 248889999876542211123579998
Q ss_pred ECC
Q 019692 215 LDP 217 (337)
Q Consensus 215 vDp 217 (337)
.-+
T Consensus 83 h~A 85 (337)
T 2c29_D 83 HVA 85 (337)
T ss_dssp ECC
T ss_pred Eec
Confidence 765
No 376
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=83.48 E-value=2.1 Score=39.72 Aligned_cols=52 Identities=21% Similarity=0.275 Sum_probs=39.3
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|...
T Consensus 186 ~~~~~g~~VlV~GaG~vG~~avqla~~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 238 (373)
T 2fzw_A 186 AKLEPGSVCAVFGLGGVGLAVIMGCKVA-GASRIIGVDINKDKFARAK----EFGATE 238 (373)
T ss_dssp TCCCTTCEEEEECCSHHHHHHHHHHHHH-TCSEEEEECSCGGGHHHHH----HHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HcCCce
Confidence 4678999999999765 55667777765 3348999999999888765 467654
No 377
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=83.47 E-value=0.99 Score=40.23 Aligned_cols=81 Identities=14% Similarity=0.150 Sum_probs=53.1
Q ss_pred CCeEEeecCCchhHHHHHHHHc------CCCCEEEEEeC-----CH----------------------HHHHH---HHHH
Q 019692 138 GWKVLDACSAPGNKTVHLAALM------KGKGKIVACEL-----NK----------------------ERVRR---LKDT 181 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~------~~~g~V~avD~-----~~----------------------~~l~~---l~~~ 181 (337)
.+.|+++|+..|+.+..++... +...+|+++|. .. +.++. ..++
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 4599999999999988877642 23579999992 21 11221 1122
Q ss_pred HHHhCC--CcEEEEeccCCCCCCCC---CCCCCccEEEECCC
Q 019692 182 IKLSGA--ANIEVLHGDFLNLDPKD---PAYSEVRAILLDPS 218 (337)
Q Consensus 182 ~~~~g~--~~v~~~~~D~~~~~~~~---~~~~~fD~IlvDpP 218 (337)
.+++|. ++|+++.+++.+..+.. ....+||.|++|.-
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D 191 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLD 191 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCC
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCc
Confidence 234664 67999999987653221 11246999999974
No 378
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=83.18 E-value=2.3 Score=39.33 Aligned_cols=51 Identities=14% Similarity=0.145 Sum_probs=39.1
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+|+ |..+.++|+..+ .+|+++|.++++++.++ ++|...
T Consensus 185 ~~~~~g~~VlV~G~G~vG~~a~qla~~~G--a~Vi~~~~~~~~~~~~~----~lGa~~ 236 (363)
T 3uog_A 185 GHLRAGDRVVVQGTGGVALFGLQIAKATG--AEVIVTSSSREKLDRAF----ALGADH 236 (363)
T ss_dssp TCCCTTCEEEEESSBHHHHHHHHHHHHTT--CEEEEEESCHHHHHHHH----HHTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEecCchhHHHHH----HcCCCE
Confidence 4578999999999776 556777777653 58999999999887754 467754
No 379
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=83.13 E-value=1.5 Score=40.82 Aligned_cols=52 Identities=17% Similarity=0.210 Sum_probs=39.9
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||=.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|...
T Consensus 189 ~~~~~g~~VlV~GaG~vG~~a~q~a~~~-Ga~~Vi~~~~~~~~~~~a~----~lGa~~ 241 (378)
T 3uko_A 189 AKVEPGSNVAIFGLGTVGLAVAEGAKTA-GASRIIGIDIDSKKYETAK----KFGVNE 241 (378)
T ss_dssp TCCCTTCCEEEECCSHHHHHHHHHHHHH-TCSCEEEECSCTTHHHHHH----TTTCCE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc-CCCeEEEEcCCHHHHHHHH----HcCCcE
Confidence 4678999999999865 66677777775 3348999999999988654 567754
No 380
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=83.04 E-value=1.9 Score=38.33 Aligned_cols=84 Identities=7% Similarity=0.049 Sum_probs=59.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCC-CCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNL-DPK-------DPAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~-~~~-------~~~~ 207 (337)
.+.+||=.| |+|+.+.+++..+ ..+.+|+.++.+...++.+.+.++..+-.++.++..|..+. ... ...+
T Consensus 11 ~~k~vlITG-as~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTG-GNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEec-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 356777555 5577888877765 33469999999999998888888776656799999998875 210 0012
Q ss_pred CCccEEEECCCCCC
Q 019692 208 SEVRAILLDPSCSG 221 (337)
Q Consensus 208 ~~fD~IlvDpPCSg 221 (337)
+.+|+++..+--.+
T Consensus 90 g~iD~lv~nAg~~~ 103 (311)
T 3o26_A 90 GKLDILVNNAGVAG 103 (311)
T ss_dssp SSCCEEEECCCCCS
T ss_pred CCCCEEEECCcccc
Confidence 46899999876443
No 381
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=82.82 E-value=1.3 Score=40.41 Aligned_cols=80 Identities=18% Similarity=0.156 Sum_probs=48.1
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCH----HHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNK----ERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~----~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
+.+||=.| |+|+.+.+++..+. .+.+|++++.+. ..+..+.+.+....-.++.++.+|..+...-......+|.
T Consensus 27 ~~~vlVtG-atG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~ 105 (352)
T 1sb8_A 27 PKVWLITG-VAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY 105 (352)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred CCeEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence 56788555 67888888877653 345899999864 2344333322111013588999998764311111236899
Q ss_pred EEECCC
Q 019692 213 ILLDPS 218 (337)
Q Consensus 213 IlvDpP 218 (337)
|+.-+.
T Consensus 106 vih~A~ 111 (352)
T 1sb8_A 106 VLHQAA 111 (352)
T ss_dssp EEECCS
T ss_pred EEECCc
Confidence 998655
No 382
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=82.49 E-value=2.2 Score=39.39 Aligned_cols=51 Identities=16% Similarity=0.078 Sum_probs=39.0
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
+.+++|++||-.|+|+ |..+.++|+.++ .+|+++|.++++++.+++ +|...
T Consensus 175 ~~~~~g~~VlV~GaG~vG~~~~qlak~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 226 (360)
T 1piw_A 175 NGCGPGKKVGIVGLGGIGSMGTLISKAMG--AETYVISRSSRKREDAMK----MGADH 226 (360)
T ss_dssp TTCSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHCC--CEEEEEcCCHHHHHHHHH----cCCCE
Confidence 4688999999999865 556677777653 479999999988877654 67654
No 383
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=82.12 E-value=20 Score=34.41 Aligned_cols=78 Identities=21% Similarity=0.167 Sum_probs=53.4
Q ss_pred CeEEeecCCchhHHHHHHHHcCCC-CEEEEEeCCHH---HHHHHHHHHHHhC--------CCcEEEEeccCCCCCCCCCC
Q 019692 139 WKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKE---RVRRLKDTIKLSG--------AANIEVLHGDFLNLDPKDPA 206 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~~-g~V~avD~~~~---~l~~l~~~~~~~g--------~~~v~~~~~D~~~~~~~~~~ 206 (337)
.+|| +.-|+|..+.+++..+... .+|++++.++. ..+.+.+.++.+. ..++.++.+|..+...-. .
T Consensus 151 ~~VL-VTGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~-~ 228 (508)
T 4f6l_B 151 GNTL-LTGATGFLGAYLIEALQGYSHRIYCFIRADNEEIAWYKLMTNLNDYFSEETVEMMLSNIEVIVGDFECMDDVV-L 228 (508)
T ss_dssp EEEE-ESCTTSHHHHHHHHHTBTTEEEEEEEEESSSHHHHHHHHHHHHHHHSCHHHHHHHSTTEEEEEEBTTBCSSCC-C
T ss_pred CeEE-EECCccchHHHHHHHHHhcCCEEEEEECCCChHHHHHHHHHHHHHhcccccchhccCceEEEecCCcccccCC-C
Confidence 4566 5568899999998887543 48999998766 4455555554431 246999999988744322 3
Q ss_pred CCCccEEEECCC
Q 019692 207 YSEVRAILLDPS 218 (337)
Q Consensus 207 ~~~fD~IlvDpP 218 (337)
...+|.|+.-+-
T Consensus 229 ~~~~D~Vih~Aa 240 (508)
T 4f6l_B 229 PENMDTIIHAGA 240 (508)
T ss_dssp SSCCSEEEECCC
T ss_pred ccCCCEEEECCc
Confidence 467999998554
No 384
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=81.91 E-value=6 Score=34.14 Aligned_cols=80 Identities=14% Similarity=0.154 Sum_probs=54.1
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~-~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
+.+||=.| |+|+.+.+++..+ ..+.+|++++. ++..++.+.+.++..+ .++.++..|..+..... ..++
T Consensus 7 ~k~vlITG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (261)
T 1gee_A 7 GKVVVITG-SSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVG-GEAIAVKGDVTVESDVINLVQSAIKEFG 84 (261)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcC-CceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 56777555 5677888877755 33468999999 8888887777776655 35888889987643110 0123
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.|+..+-.
T Consensus 85 ~id~li~~Ag~ 95 (261)
T 1gee_A 85 KLDVMINNAGL 95 (261)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 385
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=81.72 E-value=3.2 Score=36.47 Aligned_cols=82 Identities=12% Similarity=0.180 Sum_probs=56.6
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKL-SGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~-~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.+||=.| |+|+.+.+++..+ ....+|+.++.+.+.++.+.+.+.. .+ .++.++..|..+..... ..+
T Consensus 19 ~~k~vlVTG-as~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 19 DGKRALITG-ATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFG-TDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 366777555 4566777777755 3346899999999999888877765 45 35889999988754210 112
Q ss_pred CCccEEEECCCCC
Q 019692 208 SEVRAILLDPSCS 220 (337)
Q Consensus 208 ~~fD~IlvDpPCS 220 (337)
+.+|.++..+--.
T Consensus 97 g~id~lv~nAg~~ 109 (266)
T 4egf_A 97 GGLDVLVNNAGIS 109 (266)
T ss_dssp TSCSEEEEECCCC
T ss_pred CCCCEEEECCCcC
Confidence 4689999877533
No 386
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=81.63 E-value=4.6 Score=36.85 Aligned_cols=50 Identities=28% Similarity=0.265 Sum_probs=38.6
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..+++|++||-.|+|+ |..+.++++.. ..+|+++|.++++++.++ ++|..
T Consensus 160 ~~~~~g~~VlV~GaG~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~lGa~ 210 (339)
T 1rjw_A 160 TGAKPGEWVAIYGIGGLGHVAVQYAKAM--GLNVVAVDIGDEKLELAK----ELGAD 210 (339)
T ss_dssp HTCCTTCEEEEECCSTTHHHHHHHHHHT--TCEEEEECSCHHHHHHHH----HTTCS
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HCCCC
Confidence 4688999999999864 55667777765 259999999999988764 46765
No 387
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=81.61 E-value=9.5 Score=32.65 Aligned_cols=75 Identities=13% Similarity=0.134 Sum_probs=49.3
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCC------CCCCCCCCcc
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLD------PKDPAYSEVR 211 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~------~~~~~~~~fD 211 (337)
|.+||=.| |+|+.+.+++..+...+.|++++.++..++.+.+ ..++.++..|..+.. .....++.+|
T Consensus 5 ~k~vlITG-as~gIG~~~a~~l~~g~~v~~~~r~~~~~~~~~~------~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id 77 (245)
T 3e9n_A 5 KKIAVVTG-ATGGMGIEIVKDLSRDHIVYALGRNPEHLAALAE------IEGVEPIESDIVKEVLEEGGVDKLKNLDHVD 77 (245)
T ss_dssp -CEEEEES-TTSHHHHHHHHHHTTTSEEEEEESCHHHHHHHHT------STTEEEEECCHHHHHHTSSSCGGGTTCSCCS
T ss_pred CCEEEEEc-CCCHHHHHHHHHHhCCCeEEEEeCCHHHHHHHHh------hcCCcceecccchHHHHHHHHHHHHhcCCCC
Confidence 55677555 5567888888877667899999999888765543 245778888765431 1112245789
Q ss_pred EEEECCCC
Q 019692 212 AILLDPSC 219 (337)
Q Consensus 212 ~IlvDpPC 219 (337)
.++..+-.
T Consensus 78 ~lv~~Ag~ 85 (245)
T 3e9n_A 78 TLVHAAAV 85 (245)
T ss_dssp EEEECC--
T ss_pred EEEECCCc
Confidence 99987653
No 388
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=81.13 E-value=3.4 Score=36.43 Aligned_cols=81 Identities=6% Similarity=0.037 Sum_probs=56.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.++.+...++.+.+.++..|. ++.++..|..+..... ..++
T Consensus 27 ~~k~~lVTG-as~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 27 DKQVAIVTG-ASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGL-EGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 366777555 5667777777654 3346899999999999988888887774 3677888887643110 1124
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
..|.++.++--
T Consensus 105 ~iD~lvnnAg~ 115 (270)
T 3ftp_A 105 ALNVLVNNAGI 115 (270)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987753
No 389
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=81.11 E-value=1.8 Score=36.32 Aligned_cols=68 Identities=15% Similarity=0.190 Sum_probs=46.8
Q ss_pred eEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCC
Q 019692 140 KVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
+||=. -|+|+.+.++++.+ ..+.+|++++.++..+..+. .+++++.+|..+... ..+..+|.|+.-+.
T Consensus 2 kvlVt-GatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--------~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag 70 (221)
T 3ew7_A 2 KIGII-GATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--------KDINILQKDIFDLTL--SDLSDQNVVVDAYG 70 (221)
T ss_dssp EEEEE-TTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--------SSSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred eEEEE-cCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--------CCCeEEeccccChhh--hhhcCCCEEEECCc
Confidence 45534 46788888887765 33468999999987655432 457889999887654 22457899998654
No 390
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=81.10 E-value=4.6 Score=34.38 Aligned_cols=79 Identities=9% Similarity=0.103 Sum_probs=53.9
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHH-HhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIK-LSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~-~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
+.+||=.| |+|+.+.+++..+. .+.+|+.++.+.+.++.+.+.+. ..| .++.++..|..+..... ..++
T Consensus 2 ~k~vlITG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITG-ASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQG-VEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHC-CCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcC-CeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 45666555 55667777777653 34689999999999888877775 445 45888999987643110 0124
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.++..+-
T Consensus 80 ~id~li~~Ag 89 (235)
T 3l77_A 80 DVDVVVANAG 89 (235)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCc
Confidence 6899998765
No 391
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=80.93 E-value=3.7 Score=38.19 Aligned_cols=52 Identities=19% Similarity=0.204 Sum_probs=38.6
Q ss_pred hC-CCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LA-PKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~-~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
+. +++|++||-.|+|+ |..+.++|+.+ +..+|++++.++++++.++ ++|.+.
T Consensus 190 ~~~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 243 (380)
T 1vj0_A 190 YPESFAGKTVVIQGAGPLGLFGVVIARSL-GAENVIVIAGSPNRLKLAE----EIGADL 243 (380)
T ss_dssp CSSCCBTCEEEEECCSHHHHHHHHHHHHT-TBSEEEEEESCHHHHHHHH----HTTCSE
T ss_pred cCCCCCCCEEEEECcCHHHHHHHHHHHHc-CCceEEEEcCCHHHHHHHH----HcCCcE
Confidence 46 78999999999664 44566777765 2248999999999887765 467754
No 392
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=80.85 E-value=9 Score=33.14 Aligned_cols=79 Identities=9% Similarity=0.032 Sum_probs=53.8
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC-C
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY-S 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~-~ 208 (337)
+.+||=.| |+|+.+.+++..+ ..+..|++++.++..++.+.+.++..+. ++.++..|..+..... ..+ +
T Consensus 14 ~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 91 (266)
T 1xq1_A 14 AKTVLVTG-GTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGF-QVTGSVCDASLRPEREKLMQTVSSMFGG 91 (266)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHTT
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eeEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 56677554 5777888887755 3346899999999888887777766653 4888888887642110 001 4
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.|+..+-
T Consensus 92 ~id~li~~Ag 101 (266)
T 1xq1_A 92 KLDILINNLG 101 (266)
T ss_dssp CCSEEEEECC
T ss_pred CCcEEEECCC
Confidence 6899998764
No 393
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=80.79 E-value=6 Score=37.27 Aligned_cols=79 Identities=14% Similarity=0.034 Sum_probs=45.6
Q ss_pred CCeEEeecCCchhHHHHHHHHc----------------CCCCEEEEEeCCHH---HH----HHHHHHH-HHhCC-CcEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALM----------------KGKGKIVACELNKE---RV----RRLKDTI-KLSGA-ANIEV 192 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~----------------~~~g~V~avD~~~~---~l----~~l~~~~-~~~g~-~~v~~ 192 (337)
..+|+|+||++|..|+.+...+ .+.-.|+..|+-.. .+ ....+.+ +..|- .+-.+
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 4789999999999998877761 13357889998511 11 1111112 22332 12345
Q ss_pred EeccCCCCCCCCCCCCCccEEEEC
Q 019692 193 LHGDFLNLDPKDPAYSEVRAILLD 216 (337)
Q Consensus 193 ~~~D~~~~~~~~~~~~~fD~IlvD 216 (337)
+.+....+....-..++||+|+..
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss 156 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSC 156 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEE
T ss_pred EEecchhhhhccCCCCceEEEEec
Confidence 666655544332223689999864
No 394
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=80.65 E-value=5.5 Score=34.64 Aligned_cols=79 Identities=11% Similarity=0.146 Sum_probs=53.4
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHh-CCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLS-GAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~-g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
|.+||=.| |+|+.+.+++..+. .+.+|+.++.++..++.+.+.++.. |. ++.++..|..+...-. ..++
T Consensus 7 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 84 (263)
T 3ai3_A 7 GKVAVITG-SSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGV-RVLEVAVDVATPEGVDAVVESVRSSFG 84 (263)
T ss_dssp TCEEEEES-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56777555 55677877777553 3458999999998888777666554 53 5888889987643110 0124
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.++..+-
T Consensus 85 ~id~lv~~Ag 94 (263)
T 3ai3_A 85 GADILVNNAG 94 (263)
T ss_dssp SCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998765
No 395
>4ezb_A Uncharacterized conserved protein; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 2.10A {Sinorhizobium meliloti}
Probab=80.58 E-value=5.1 Score=36.42 Aligned_cols=105 Identities=13% Similarity=0.044 Sum_probs=58.7
Q ss_pred CeEEeecCCchhHHHHHHHHcCCC--CEEEEEeCCHH---HHHHHHHHHHHhCCCcEEEEec-cCCCCCCCCCCCCCccE
Q 019692 139 WKVLDACSAPGNKTVHLAALMKGK--GKIVACELNKE---RVRRLKDTIKLSGAANIEVLHG-DFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~~--g~V~avD~~~~---~l~~l~~~~~~~g~~~v~~~~~-D~~~~~~~~~~~~~fD~ 212 (337)
.+|-=+| .|..+..++..+... ..|+++|.+++ +.+...+.+...|+ .. +..+. ....|+
T Consensus 25 m~IgvIG--~G~mG~~lA~~L~~~G~~~V~~~dr~~~~~~~~~~~~~~~~~~g~------~~~s~~e~------~~~aDv 90 (317)
T 4ezb_A 25 TTIAFIG--FGEAAQSIAGGLGGRNAARLAAYDLRFNDPAASGALRARAAELGV------EPLDDVAG------IACADV 90 (317)
T ss_dssp CEEEEEC--CSHHHHHHHHHHHTTTCSEEEEECGGGGCTTTHHHHHHHHHHTTC------EEESSGGG------GGGCSE
T ss_pred CeEEEEC--ccHHHHHHHHHHHHcCCCeEEEEeCCCccccchHHHHHHHHHCCC------CCCCHHHH------HhcCCE
Confidence 3566565 455566666655444 48999999972 33333344445554 12 22222 134689
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCcccCHHHHHHH
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~~ENe~vv~~~ 292 (337)
|++=.|-. .. .+.+......+++|.+|-.++|+.+...+.+.+.+
T Consensus 91 Vi~avp~~---------------------------~~--------~~~~~~i~~~l~~~~ivv~~st~~p~~~~~~~~~l 135 (317)
T 4ezb_A 91 VLSLVVGA---------------------------AT--------KAVAASAAPHLSDEAVFIDLNSVGPDTKALAAGAI 135 (317)
T ss_dssp EEECCCGG---------------------------GH--------HHHHHHHGGGCCTTCEEEECCSCCHHHHHHHHHHH
T ss_pred EEEecCCH---------------------------HH--------HHHHHHHHhhcCCCCEEEECCCCCHHHHHHHHHHH
Confidence 99866511 01 11234444556667777777788887777666544
No 396
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=80.58 E-value=2.6 Score=37.22 Aligned_cols=81 Identities=14% Similarity=0.105 Sum_probs=57.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.|.++|=.| |+|+.+.+++..+ ..+.+|+.++.++..++.+.+.++..|. ++.++..|..+.... ...++
T Consensus 25 ~gk~~lVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 25 GGRTALVTG-SSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGH-DAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTC-CEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 366777555 5666777777755 3346899999999999988888877763 588888898764311 01134
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.++..+--
T Consensus 103 ~iD~lv~nAg~ 113 (271)
T 4ibo_A 103 DVDILVNNAGI 113 (271)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987753
No 397
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=80.48 E-value=5.8 Score=35.17 Aligned_cols=123 Identities=9% Similarity=0.110 Sum_probs=72.7
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHH-------HHHHHHHHHHHhCCCcEEEEeccCCCCCCCC----
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKE-------RVRRLKDTIKLSGAANIEVLHGDFLNLDPKD---- 204 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~-------~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~---- 204 (337)
.|.++|=.|++ |+.+.+++..+. .+.+|+.++.+.. .++.+.+.++..|. ++.++..|..+.....
T Consensus 8 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 8 RGKTMFISGGS-RGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGG-QALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp TTCEEEEESCS-SHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTS-EEEEEECCTTSHHHHHHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHH
Confidence 36677766655 567777777653 3458999999876 46666666666663 5888999987643110
Q ss_pred ---CCCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHH----HHHHHHHHHHhCCCC---CcEEE
Q 019692 205 ---PAYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLS----AFQKKALRHALSFPG---VERVV 274 (337)
Q Consensus 205 ---~~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~----~~Q~~lL~~A~~~~~---~G~lv 274 (337)
..++.+|.++..+--...+.+. ..+.++..+.- .-...+++.++..++ .|.+|
T Consensus 86 ~~~~~~g~id~lvnnAg~~~~~~~~-----------------~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv 148 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASAINLGSIE-----------------EVPLKRFDLMNGIQVRGTYAVSQSCIPHMKGRDNPHIL 148 (285)
T ss_dssp HHHHHHSCCSEEEECCCCCCCCCTT-----------------TSCHHHHHHHHHHHHHHHHHHHHHHGGGTTTSSSCEEE
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcc-----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEE
Confidence 1124689999876533222110 11344444322 234456666666442 37888
Q ss_pred EEcC
Q 019692 275 YSTC 278 (337)
Q Consensus 275 YsTC 278 (337)
+.+.
T Consensus 149 ~isS 152 (285)
T 3sc4_A 149 TLSP 152 (285)
T ss_dssp ECCC
T ss_pred EECC
Confidence 8654
No 398
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=80.45 E-value=17 Score=31.72 Aligned_cols=81 Identities=11% Similarity=0.131 Sum_probs=53.8
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHH-HHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTI-KLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~-~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.++|=.| |+|+.+.+++..+. .+.+|+.++.++..++.+.+.+ +..|. ++.++..|..+..... ..+
T Consensus 20 ~~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 97 (267)
T 1vl8_A 20 RGRVALVTG-GSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGV-ETMAFRCDVSNYEEVKKLLEAVKEKF 97 (267)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEEC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 356677665 55777877777553 3468999999998888777666 44453 4778888987642110 012
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.++..+-.
T Consensus 98 g~iD~lvnnAg~ 109 (267)
T 1vl8_A 98 GKLDTVVNAAGI 109 (267)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 468999987653
No 399
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=80.35 E-value=6.6 Score=34.56 Aligned_cols=81 Identities=10% Similarity=0.136 Sum_probs=53.6
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~-~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.++|=.|++ |+.+.+++..+. .+.+|+.++. +...++.+.+.++..|. ++.++..|..+..... ..+
T Consensus 30 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 107 (271)
T 3v2g_A 30 AGKTAFVTGGS-RGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGG-RAVAIRADNRDAEAIEQAIRETVEAL 107 (271)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 46778877755 567777776553 3457888755 46777877777777764 4888889987643110 112
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.++..+--
T Consensus 108 g~iD~lvnnAg~ 119 (271)
T 3v2g_A 108 GGLDILVNSAGI 119 (271)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCcEEEECCCC
Confidence 468999987753
No 400
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=80.20 E-value=3.3 Score=38.89 Aligned_cols=51 Identities=25% Similarity=0.304 Sum_probs=38.4
Q ss_pred CCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 134 APKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 134 ~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
.+++|++||=.|+|+ |..+.++|+.+ +..+|+++|.++++++.++ ++|...
T Consensus 210 ~~~~g~~VlV~GaG~vG~~aiqlak~~-Ga~~Vi~~~~~~~~~~~~~----~lGa~~ 261 (404)
T 3ip1_A 210 GIRPGDNVVILGGGPIGLAAVAILKHA-GASKVILSEPSEVRRNLAK----ELGADH 261 (404)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHT-TCSEEEEECSCHHHHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HcCCCE
Confidence 578999999998865 55567777765 3348999999999988765 467653
No 401
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=79.90 E-value=2.3 Score=37.72 Aligned_cols=82 Identities=10% Similarity=0.106 Sum_probs=57.0
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.+||=.|++ |+.+.+++..+ ..+.+|+.++.+.+.++.+.+.++..|. ++.++..|..+..... ..++
T Consensus 31 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~g 108 (276)
T 3r1i_A 31 SGKRALITGAS-TGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGG-KALPIRCDVTQPDQVRGMLDQMTGELG 108 (276)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTC-CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 36777766654 66777777655 3346899999999999888888877764 4778888987643110 0124
Q ss_pred CccEEEECCCCC
Q 019692 209 EVRAILLDPSCS 220 (337)
Q Consensus 209 ~fD~IlvDpPCS 220 (337)
.+|.++..+--+
T Consensus 109 ~iD~lvnnAg~~ 120 (276)
T 3r1i_A 109 GIDIAVCNAGIV 120 (276)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999877533
No 402
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=79.86 E-value=1.2 Score=40.87 Aligned_cols=51 Identities=22% Similarity=0.190 Sum_probs=38.0
Q ss_pred hCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.|+ |.|..+.++++.. ..+|++++.++++++.+++ +|...
T Consensus 155 ~~~~~g~~VlV~Gasg~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~~----~ga~~ 207 (342)
T 4eye_A 155 GQLRAGETVLVLGAAGGIGTAAIQIAKGM--GAKVIAVVNRTAATEFVKS----VGADI 207 (342)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSGGGHHHHHH----HTCSE
T ss_pred cCCCCCCEEEEECCCCHHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHHh----cCCcE
Confidence 45788999998886 3456677777765 3599999999988876654 57654
No 403
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=79.80 E-value=2.4 Score=38.76 Aligned_cols=52 Identities=19% Similarity=0.217 Sum_probs=40.3
Q ss_pred HhCCCCCCeEEeecCC--chhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 132 ALAPKPGWKVLDACSA--PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG--~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
...+++|++||-.|+| .|..+.++++..+ .+|+++|.++++++.+++ +|...
T Consensus 139 ~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~~----lga~~ 192 (340)
T 3gms_A 139 TLNLQRNDVLLVNACGSAIGHLFAQLSQILN--FRLIAVTRNNKHTEELLR----LGAAY 192 (340)
T ss_dssp TSCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSSTTHHHHHH----HTCSE
T ss_pred hcccCCCCEEEEeCCccHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----CCCcE
Confidence 3567899999999886 5667777887753 589999999998877654 57653
No 404
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=79.69 E-value=15 Score=32.17 Aligned_cols=80 Identities=13% Similarity=0.104 Sum_probs=54.7
Q ss_pred CCeEEeecCCchhHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~-~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
+.+||=.| |+|+.+..++..+.. ..+|++++.++..++.+.+.++..+. ++.++..|..+...-. ..++.
T Consensus 44 ~k~vlITG-asggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~-~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 44 NKVALVTG-AGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGY-ESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SCEEEEES-TTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTC-CEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCC-ceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 56777565 557788888876643 45899999998888877777765553 4888889987643110 01246
Q ss_pred ccEEEECCCC
Q 019692 210 VRAILLDPSC 219 (337)
Q Consensus 210 fD~IlvDpPC 219 (337)
+|.|+..+--
T Consensus 122 id~li~~Ag~ 131 (285)
T 2c07_A 122 VDILVNNAGI 131 (285)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 405
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=79.47 E-value=2.8 Score=32.80 Aligned_cols=72 Identities=21% Similarity=0.253 Sum_probs=46.3
Q ss_pred CCeEEeecCCchhHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-CCCCCCccEEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAILL 215 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~-~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~~fD~Ilv 215 (337)
..+|+=+|+ |..+..++..+.. +..|+++|.+++.++.+++ .| +.++.+|..+...- ......+|.|++
T Consensus 6 ~~~v~I~G~--G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~~----~~---~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGS--EAAGVGLVRELTAAGKKVLAVDKSKEKIELLED----EG---FDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---CEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----CC---CcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 457777777 5566666665532 3589999999998877654 23 46778887653210 001246899987
Q ss_pred CCC
Q 019692 216 DPS 218 (337)
Q Consensus 216 DpP 218 (337)
-.|
T Consensus 77 ~~~ 79 (141)
T 3llv_A 77 TGS 79 (141)
T ss_dssp CCS
T ss_pred ecC
Confidence 544
No 406
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=79.44 E-value=10 Score=32.53 Aligned_cols=80 Identities=16% Similarity=0.200 Sum_probs=54.0
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~-~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
|.+||=.| |+|+.+.+++..+. ...+|+.++. ++..++.+.+.++..|. ++.++..|..+..... ..++
T Consensus 4 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 81 (246)
T 2uvd_A 4 GKVALVTG-ASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGS-DAIAVRADVANAEDVTNMVKQTVDVFG 81 (246)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 55667454 56778888877653 3458999999 88888887777776653 5788888987643110 0124
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.++..+-.
T Consensus 82 ~id~lv~nAg~ 92 (246)
T 2uvd_A 82 QVDILVNNAGV 92 (246)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 407
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=79.37 E-value=6.4 Score=35.05 Aligned_cols=80 Identities=15% Similarity=0.122 Sum_probs=55.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCC----CEEEEEeCCHHHHHHHHHHHHHhC-CCcEEEEeccCCCCCC-------CCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGK----GKIVACELNKERVRRLKDTIKLSG-AANIEVLHGDFLNLDP-------KDP 205 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~----g~V~avD~~~~~l~~l~~~~~~~g-~~~v~~~~~D~~~~~~-------~~~ 205 (337)
|.++|=.|+ +|+.+..++..+-.. ..|+.++.+.+.++.+.+.++... -.++.++..|..+... ...
T Consensus 33 ~k~~lVTGa-s~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 33 KKTVLITGA-SAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TCEEEEEST-TSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCEEEEecC-CChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 678887775 466777777654211 289999999999998888877653 2358889999877541 112
Q ss_pred CCCCccEEEECCC
Q 019692 206 AYSEVRAILLDPS 218 (337)
Q Consensus 206 ~~~~fD~IlvDpP 218 (337)
.++.+|.++.++-
T Consensus 112 ~~g~iD~lVnnAG 124 (287)
T 3rku_A 112 EFKDIDILVNNAG 124 (287)
T ss_dssp GGCSCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 2457899998764
No 408
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=79.34 E-value=6.3 Score=34.41 Aligned_cols=124 Identities=12% Similarity=0.086 Sum_probs=71.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHcCC-CCEEEEEeCC---HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------C
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMKG-KGKIVACELN---KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------P 205 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~~-~g~V~avD~~---~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~ 205 (337)
.|.+||=.|++ |+.+..++..+.. +.+|+.++.+ .+.++.+.+.++..| .++.++..|..+..... .
T Consensus 10 ~~k~vlVTGas-~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~ 87 (262)
T 3ksu_A 10 KNKVIVIAGGI-KNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQG-AKVALYQSDLSNEEEVAKLFDFAEK 87 (262)
T ss_dssp TTCEEEEETCS-SHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTT-CEEEEEECCCCSHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHH
Confidence 36677766654 6678888776643 3588887654 456666666665555 35888999987643110 1
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHH----HHHHHHHHHHhCCCCC-cEEEEEcCC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLS----AFQKKALRHALSFPGV-ERVVYSTCS 279 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~----~~Q~~lL~~A~~~~~~-G~lvYsTCS 279 (337)
.++..|.++.++--...+.+. ..+.++..+.- .-...+++.++..++. |.+|+.+.+
T Consensus 88 ~~g~iD~lvnnAg~~~~~~~~-----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~ 149 (262)
T 3ksu_A 88 EFGKVDIAINTVGKVLKKPIV-----------------ETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS 149 (262)
T ss_dssp HHCSEEEEEECCCCCCSSCGG-----------------GCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred HcCCCCEEEECCCCCCCCCcc-----------------cCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence 124689999876433222110 01344443332 2344566677665544 788876543
No 409
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=79.30 E-value=3.1 Score=36.28 Aligned_cols=81 Identities=11% Similarity=0.069 Sum_probs=54.7
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~-~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.+.+||=.| |+|+.+.+++..+. .+.+|++++. ++..++.+.+.++..|. ++.++.+|..+...-. ..+
T Consensus 20 ~~k~vlItG-asggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~ 97 (274)
T 1ja9_A 20 AGKVALTTG-AGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGA-QGVAIQADISKPSEVVALFDKAVSHF 97 (274)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 356777555 67888888877653 3458999999 88888877777776663 4888889987643110 012
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.|+..+..
T Consensus 98 ~~~d~vi~~Ag~ 109 (274)
T 1ja9_A 98 GGLDFVMSNSGM 109 (274)
T ss_dssp SCEEEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 368999876543
No 410
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=79.03 E-value=18 Score=31.50 Aligned_cols=81 Identities=14% Similarity=0.143 Sum_probs=54.4
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeC-------------CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACEL-------------NKERVRRLKDTIKLSGAANIEVLHGDFLNLDP 202 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~-------------~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~ 202 (337)
.|.++|=.|++ |+.+.+++..+ ....+|+.+|. +...++.+.+.++..+. .+.++..|..+...
T Consensus 10 ~~k~~lVTGas-~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 10 EGRVAFITGAA-RGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANR-RIVAAVVDTRDFDR 87 (277)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHH
T ss_pred CCCEEEEECCc-cHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHH
Confidence 36677766654 55677776654 33468999998 67788877777776663 58888899876431
Q ss_pred CC-------CCCCCccEEEECCCC
Q 019692 203 KD-------PAYSEVRAILLDPSC 219 (337)
Q Consensus 203 ~~-------~~~~~fD~IlvDpPC 219 (337)
.. ..++.+|.++.++--
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCC
Confidence 10 012468999987753
No 411
>3nbm_A PTS system, lactose-specific IIBC components; PTS_IIB_LACTOSE, phosphoenolpyruvate:carbohydrate system, P- phosphorylation; HET: MSE; 1.30A {Streptococcus pneumoniae}
Probab=78.95 E-value=3.2 Score=31.75 Aligned_cols=57 Identities=19% Similarity=0.219 Sum_probs=33.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDp 217 (337)
..+|| ++|+.|..|..++.. +++.++..|++ +.+.......+... ...||+||+-|
T Consensus 6 ~mkIl-L~C~aGmSTsllv~k-------------------m~~~a~~~gi~-v~i~a~~~~~~~~~---~~~~DvvLLgP 61 (108)
T 3nbm_A 6 ELKVL-VLCAGSGTSAQLANA-------------------INEGANLTEVR-VIANSGAYGAHYDI---MGVYDLIILAP 61 (108)
T ss_dssp CEEEE-EEESSSSHHHHHHHH-------------------HHHHHHHHTCS-EEEEEEETTSCTTT---GGGCSEEEECG
T ss_pred CceEE-EECCCCCCHHHHHHH-------------------HHHHHHHCCCc-eEEEEcchHHHHhh---ccCCCEEEECh
Confidence 44677 556666666666554 34456666775 55554433333322 25699999966
Q ss_pred C
Q 019692 218 S 218 (337)
Q Consensus 218 P 218 (337)
-
T Consensus 62 Q 62 (108)
T 3nbm_A 62 Q 62 (108)
T ss_dssp G
T ss_pred H
Confidence 5
No 412
>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A
Probab=78.90 E-value=9.1 Score=32.68 Aligned_cols=78 Identities=10% Similarity=0.107 Sum_probs=50.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
+.+||=.| |+|+.+.+++..+. .+.+|++++.++..++.+.+.+... .++.++..|..+...-. ..++.
T Consensus 6 ~k~vlVtG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (251)
T 1zk4_A 6 GKVAIITG-GTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTP--DQIQFFQHDSSDEDGWTKLFDATEKAFGP 82 (251)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCT--TTEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CcEEEEeC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcc--CceEEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 55677554 56778888877553 3468999999988777665544321 45888999987643110 01235
Q ss_pred ccEEEECCC
Q 019692 210 VRAILLDPS 218 (337)
Q Consensus 210 fD~IlvDpP 218 (337)
+|.|+..+.
T Consensus 83 id~li~~Ag 91 (251)
T 1zk4_A 83 VSTLVNNAG 91 (251)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 899998764
No 413
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=78.87 E-value=4.8 Score=34.92 Aligned_cols=78 Identities=12% Similarity=0.064 Sum_probs=53.4
Q ss_pred CeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCCc
Q 019692 139 WKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSEV 210 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~f 210 (337)
.++|=.| |+|+.+.+++..+. ...+|+.++.++..++.+.+.++..|. ++.++..|..+...-. ..++.+
T Consensus 3 k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 80 (256)
T 1geg_A 3 KVALVTG-AGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGG-HAVAVKVDVSDRDQVFAAVEQARKTLGGF 80 (256)
T ss_dssp CEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHTTCC
T ss_pred CEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4566555 56677877777553 345899999999888887777766653 5788888987643110 113478
Q ss_pred cEEEECCC
Q 019692 211 RAILLDPS 218 (337)
Q Consensus 211 D~IlvDpP 218 (337)
|.++..+-
T Consensus 81 d~lv~nAg 88 (256)
T 1geg_A 81 DVIVNNAG 88 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99998764
No 414
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=78.68 E-value=18 Score=32.51 Aligned_cols=82 Identities=16% Similarity=0.195 Sum_probs=54.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELN------------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 203 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~------------~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 203 (337)
.|.+||=.| |+|+.+..++..+ ..+.+|+.+|.+ .+.++.+.+.++..|. ++.++..|..+....
T Consensus 45 ~gk~~lVTG-as~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v 122 (317)
T 3oec_A 45 QGKVAFITG-AARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGR-RIIARQADVRDLASL 122 (317)
T ss_dssp TTCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCC-eEEEEECCCCCHHHH
Confidence 466777555 4566777777655 334689999886 7777777777777663 588889998764311
Q ss_pred C-------CCCCCccEEEECCCCC
Q 019692 204 D-------PAYSEVRAILLDPSCS 220 (337)
Q Consensus 204 ~-------~~~~~fD~IlvDpPCS 220 (337)
. ..++.+|+++.++--+
T Consensus 123 ~~~~~~~~~~~g~iD~lVnnAg~~ 146 (317)
T 3oec_A 123 QAVVDEALAEFGHIDILVSNVGIS 146 (317)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCC
Confidence 0 1124689999877543
No 415
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=78.63 E-value=7.4 Score=35.00 Aligned_cols=50 Identities=20% Similarity=0.179 Sum_probs=35.4
Q ss_pred CCCCCC-eEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 134 APKPGW-KVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 134 ~~~~g~-~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
.+++++ +||=.|+ +.|..+.++|+..+ .+|++++.++++++.+++ +|.+.
T Consensus 142 ~~~~~~g~VlV~Ga~G~vG~~aiqla~~~G--a~Vi~~~~~~~~~~~~~~----lGa~~ 194 (324)
T 3nx4_A 142 GIRPQDGEVVVTGASGGVGSTAVALLHKLG--YQVAAVSGRESTHGYLKS----LGANR 194 (324)
T ss_dssp TCCGGGCCEEESSTTSHHHHHHHHHHHHTT--CCEEEEESCGGGHHHHHH----HTCSE
T ss_pred ccCCCCCeEEEECCCcHHHHHHHHHHHHcC--CEEEEEeCCHHHHHHHHh----cCCCE
Confidence 355532 4887775 45667778888753 489999999998887754 68664
No 416
>2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A*
Probab=78.57 E-value=16 Score=35.23 Aligned_cols=84 Identities=14% Similarity=0.109 Sum_probs=54.9
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCC--CEEEEEeCCHH---HHHHHHHHHHHhCCCcEEEEeccCCCCCC------C
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGK--GKIVACELNKE---RVRRLKDTIKLSGAANIEVLHGDFLNLDP------K 203 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~--g~V~avD~~~~---~l~~l~~~~~~~g~~~v~~~~~D~~~~~~------~ 203 (337)
..++.+||=. -|+|+.+.++++.+-.. .+|+.++.+.. .++.+.+.++..|. ++.++.+|..+... .
T Consensus 223 ~~~~~~vLIT-GgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dv~d~~~v~~~~~~ 300 (486)
T 2fr1_A 223 WKPTGTVLVT-GGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGA-RTTVAACDVTDRESVRELLGG 300 (486)
T ss_dssp CCCCSEEEEE-TTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTC-EEEEEECCTTCHHHHHHHHHT
T ss_pred cCCCCEEEEE-CCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHHH
Confidence 4567788855 46788888888765322 35999998864 34555566666663 58889999876321 1
Q ss_pred CCCCCCccEEEECCCCC
Q 019692 204 DPAYSEVRAILLDPSCS 220 (337)
Q Consensus 204 ~~~~~~fD~IlvDpPCS 220 (337)
...+..+|.||..+--.
T Consensus 301 i~~~g~ld~VIh~AG~~ 317 (486)
T 2fr1_A 301 IGDDVPLSAVFHAAATL 317 (486)
T ss_dssp SCTTSCEEEEEECCCCC
T ss_pred HHhcCCCcEEEECCccC
Confidence 11235689999876533
No 417
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=78.54 E-value=4.1 Score=38.28 Aligned_cols=21 Identities=24% Similarity=0.474 Sum_probs=18.1
Q ss_pred CCeEEeecCCchhHHHHHHHH
Q 019692 138 GWKVLDACSAPGNKTVHLAAL 158 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~ 158 (337)
..+|+|+|||+|..|+.+...
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ 73 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDF 73 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHH
T ss_pred ceEEEecCCCCChhHHHHHHH
Confidence 578999999999999988554
No 418
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=78.25 E-value=7 Score=33.31 Aligned_cols=80 Identities=10% Similarity=0.128 Sum_probs=53.8
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHH-hCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKL-SGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~-~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
+.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.+.. .+. ++.++..|..+...-. ..++
T Consensus 7 ~~~vlVtG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~ 84 (248)
T 2pnf_A 7 GKVSLVTG-STRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGV-KAHGVEMNLLSEESINKAFEEIYNLVD 84 (248)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCC-CEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCEEEEEC-CCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCC-ceEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 56677554 5677888887765 3346899999999888877776654 453 5888888887643110 0124
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.|+..+..
T Consensus 85 ~~d~vi~~Ag~ 95 (248)
T 2pnf_A 85 GIDILVNNAGI 95 (248)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 419
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=78.16 E-value=11 Score=33.16 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=58.4
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.|..+|=.|++.| .+..+|..+ ....+|+.+|.+++.++.+.+.++..|. ++..+..|..+.... ...++
T Consensus 6 ~gKvalVTGas~G-IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~-~~~~~~~Dvt~~~~v~~~~~~~~~~~G 83 (254)
T 4fn4_A 6 KNKVVIVTGAGSG-IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGK-EVLGVKADVSKKKDVEEFVRRTFETYS 83 (254)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCH-HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 3777787776555 666666654 3457999999999999999999988874 488889998764311 11246
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
+.|.++.++-
T Consensus 84 ~iDiLVNNAG 93 (254)
T 4fn4_A 84 RIDVLCNNAG 93 (254)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 7899998774
No 420
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=78.08 E-value=7.9 Score=33.85 Aligned_cols=81 Identities=12% Similarity=0.115 Sum_probs=53.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~-~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.++|=.|+ +|+.+.+++..+. .+.+|+.++. +.+.++.+.+.++..|. ++.++..|..+..... ..+
T Consensus 17 ~~k~~lVTGa-s~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 17 DGKVALVTGS-GRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGS-DAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp TTCEEEESCT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3667776664 5667777776553 3457888765 57777878888877763 5888899987643110 112
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+..|.++.++--
T Consensus 95 g~id~lvnnAg~ 106 (270)
T 3is3_A 95 GHLDIAVSNSGV 106 (270)
T ss_dssp SCCCEEECCCCC
T ss_pred CCCCEEEECCCC
Confidence 468999886653
No 421
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=77.98 E-value=21 Score=31.61 Aligned_cols=80 Identities=13% Similarity=0.168 Sum_probs=54.6
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELN------------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 203 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~------------~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 203 (337)
.|.++|=.|++ |+.+..++..+ ..+.+|+.+|.+ .+.++.+.+.++..|. ++.++..|..+....
T Consensus 27 ~gk~~lVTGas-~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 104 (299)
T 3t7c_A 27 EGKVAFITGAA-RGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGR-RIIASQVDVRDFDAM 104 (299)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEECCC-CHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCC-ceEEEECCCCCHHHH
Confidence 36677766655 55677776654 334689999987 7778877777777763 588999998764311
Q ss_pred C-------CCCCCccEEEECCC
Q 019692 204 D-------PAYSEVRAILLDPS 218 (337)
Q Consensus 204 ~-------~~~~~fD~IlvDpP 218 (337)
. ..++..|.++.++-
T Consensus 105 ~~~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 105 QAAVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHhCCCCEEEECCC
Confidence 0 01246899998764
No 422
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=77.66 E-value=2.7 Score=37.88 Aligned_cols=66 Identities=9% Similarity=-0.034 Sum_probs=45.5
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCcc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVR 211 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD 211 (337)
..+++|++||=.|+|+ |..+.++|+..+ .+|++++ ++++++.++ ++|.+.+ +. |...+ ...+|
T Consensus 138 ~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~-~~~~~~~~~----~lGa~~v--~~-d~~~v------~~g~D 201 (315)
T 3goh_A 138 IPLTKQREVLIVGFGAVNNLLTQMLNNAG--YVVDLVS-ASLSQALAA----KRGVRHL--YR-EPSQV------TQKYF 201 (315)
T ss_dssp SCCCSCCEEEEECCSHHHHHHHHHHHHHT--CEEEEEC-SSCCHHHHH----HHTEEEE--ES-SGGGC------CSCEE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcC--CEEEEEE-ChhhHHHHH----HcCCCEE--Ec-CHHHh------CCCcc
Confidence 4678999999999864 666777888763 4999999 888887764 4676432 22 42222 24688
Q ss_pred EEE
Q 019692 212 AIL 214 (337)
Q Consensus 212 ~Il 214 (337)
+||
T Consensus 202 vv~ 204 (315)
T 3goh_A 202 AIF 204 (315)
T ss_dssp EEE
T ss_pred EEE
Confidence 876
No 423
>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}
Probab=77.63 E-value=18 Score=30.62 Aligned_cols=79 Identities=11% Similarity=0.178 Sum_probs=51.9
Q ss_pred eEEeecCCchhHHHHHHHHcCC-CCEEEEE-eCCHHHHHHHHHHHHHhCCCcEEE-EeccCCCCCCCC-------CCCCC
Q 019692 140 KVLDACSAPGNKTVHLAALMKG-KGKIVAC-ELNKERVRRLKDTIKLSGAANIEV-LHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~-~g~V~av-D~~~~~l~~l~~~~~~~g~~~v~~-~~~D~~~~~~~~-------~~~~~ 209 (337)
+||=. -|+|+.+.+++..+.. +.+|+++ +.++..++.+.+.++..+.. +.. +..|..+..... ..++.
T Consensus 3 ~vlIT-GasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (245)
T 2ph3_A 3 KALIT-GASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSP-LVAVLGANLLEAEAATALVHQAAEVLGG 80 (245)
T ss_dssp EEEET-TTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCS-CEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred EEEEe-CCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCc-eEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence 45544 4678888888876643 3588888 88988888777777766643 444 788877643110 00246
Q ss_pred ccEEEECCCCC
Q 019692 210 VRAILLDPSCS 220 (337)
Q Consensus 210 fD~IlvDpPCS 220 (337)
+|.|+..+...
T Consensus 81 ~d~li~~Ag~~ 91 (245)
T 2ph3_A 81 LDTLVNNAGIT 91 (245)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877543
No 424
>4a7p_A UDP-glucose dehydrogenase; oxidoreductase, carbohydrate synthesis, exopolysaccharide; HET: NAD; 3.40A {Sphingomonas elodea}
Probab=77.52 E-value=6.5 Score=37.75 Aligned_cols=139 Identities=12% Similarity=0.143 Sum_probs=72.1
Q ss_pred ecCCchhHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHHH------------HHh-CCCcEEEEeccCCCCCCCCCCCCC
Q 019692 144 ACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDTI------------KLS-GAANIEVLHGDFLNLDPKDPAYSE 209 (337)
Q Consensus 144 l~aG~G~kt~~la~~~~~-~g~V~avD~~~~~l~~l~~~~------------~~~-g~~~v~~~~~D~~~~~~~~~~~~~ 209 (337)
..-|.|+.++.+|..+.. +..|+++|+++++++.+++.. ++. .-.++++. .|..+. ...
T Consensus 12 ~vIGlG~vG~~~A~~La~~G~~V~~~D~~~~kv~~l~~g~~~~~epgl~~~~~~~~~~g~l~~t-td~~ea------~~~ 84 (446)
T 4a7p_A 12 AMIGTGYVGLVSGACFSDFGHEVVCVDKDARKIELLHQNVMPIYEPGLDALVASNVKAGRLSFT-TDLAEG------VKD 84 (446)
T ss_dssp EEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHHTTTCCSSCCTTHHHHHHHHHHTTCEEEE-SCHHHH------HTT
T ss_pred EEEcCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHhcCCCCccCCCHHHHHHhhcccCCEEEE-CCHHHH------Hhc
Confidence 445777777777776543 358999999999988776520 000 01224332 232111 134
Q ss_pred ccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCcccCHHHH
Q 019692 210 VRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVI 289 (337)
Q Consensus 210 fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~~ENe~vv 289 (337)
.|+||+-.|-.... -...||+ ..+. ..++.....+++|.+|-...|+.|...+.+.
T Consensus 85 aDvvii~Vptp~~~-~~~~~Dl----------------~~v~-------~v~~~i~~~l~~g~iVV~~STv~pgtt~~l~ 140 (446)
T 4a7p_A 85 ADAVFIAVGTPSRR-GDGHADL----------------SYVF-------AAAREIAENLTKPSVIVTKSTVPVGTGDEVE 140 (446)
T ss_dssp CSEEEECCCCCBCT-TTCCBCT----------------HHHH-------HHHHHHHHSCCSCCEEEECSCCCTTHHHHHH
T ss_pred CCEEEEEcCCCCcc-ccCCccH----------------HHHH-------HHHHHHHHhcCCCCEEEEeCCCCchHHHHHH
Confidence 68898876533210 0113332 1122 2233344455666555555588888888887
Q ss_pred HHHhchhcCCCcEEecCCCCCCcch
Q 019692 290 KSVLPIAMSFGFQLATPFPNGTAEA 314 (337)
Q Consensus 290 ~~~l~~~~~~~~~~~~~~~~~~~~~ 314 (337)
+.+.+.....+|.+.. -|+....|
T Consensus 141 ~~l~e~~~~~d~~v~~-~Pe~a~eG 164 (446)
T 4a7p_A 141 RIIAEVAPNSGAKVVS-NPEFLREG 164 (446)
T ss_dssp HHHHHHSTTSCCEEEE-CCCCCCTT
T ss_pred HHHHHhCCCCCceEEe-Cccccccc
Confidence 6655432223455432 24444444
No 425
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=77.49 E-value=10 Score=33.63 Aligned_cols=124 Identities=12% Similarity=0.052 Sum_probs=72.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCC--HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELN--KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PA 206 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~--~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~ 206 (337)
.|.+||=.|+ +|+.+.+++..+. .+.+|+.++.+ ....+.+.+.++..|. ++.++..|..+..... ..
T Consensus 48 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 48 KDRKALVTGG-DSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGR-KAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTC-CEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCC-cEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3667776664 5667777777553 34589988886 4566777777777663 5888888987643110 11
Q ss_pred CCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHH----HHHHHHHHHHhCCCC-CcEEEEEcC
Q 019692 207 YSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLS----AFQKKALRHALSFPG-VERVVYSTC 278 (337)
Q Consensus 207 ~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~----~~Q~~lL~~A~~~~~-~G~lvYsTC 278 (337)
++.+|.++..+--... ...+ ...+.++..+.- .-...+++.++..++ .|.||+.+.
T Consensus 126 ~g~iD~lv~nAg~~~~-----~~~~-----------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS 186 (294)
T 3r3s_A 126 LGGLDILALVAGKQTA-----IPEI-----------KDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSS 186 (294)
T ss_dssp HTCCCEEEECCCCCCC-----CSSG-----------GGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECC
T ss_pred cCCCCEEEECCCCcCC-----CCCc-----------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECC
Confidence 2468999987642211 0000 001334333322 234456677766544 478888643
No 426
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=77.35 E-value=7.5 Score=33.70 Aligned_cols=80 Identities=8% Similarity=0.125 Sum_probs=52.6
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHH-HHHHHHHHHHh-CCCcEEEEeccCCCCCCCC-------CCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKER-VRRLKDTIKLS-GAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~-l~~l~~~~~~~-g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
|.+||=.| |+|+.+.+++..+. .+.+|+.++.++.. ++.+.+.+... |. ++.++..|..+...-. ..+
T Consensus 4 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~v~~~~~~~~~~~ 81 (260)
T 1x1t_A 4 GKVAVVTG-STSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGV-KVLYDGADLSKGEAVRGLVDNAVRQM 81 (260)
T ss_dssp TCEEEETT-CSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTS-CEEEECCCTTSHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCC-cEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 55677555 56667888777653 34589999998877 77776666554 53 4788888987643110 012
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.++..+-.
T Consensus 82 g~iD~lv~~Ag~ 93 (260)
T 1x1t_A 82 GRIDILVNNAGI 93 (260)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987653
No 427
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=77.03 E-value=7.4 Score=33.37 Aligned_cols=79 Identities=16% Similarity=0.202 Sum_probs=51.8
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC---CCCCCCccE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---DPAYSEVRA 212 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~---~~~~~~fD~ 212 (337)
++.+||=.| |+|+.+.+++..+. .+.+|+.++.+...++.+.+.+. .++.+...|..+.... ....+.+|.
T Consensus 13 ~~k~vlVTG-as~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~~~~~~~~~~~id~ 87 (249)
T 3f9i_A 13 TGKTSLITG-ASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALK----DNYTIEVCNLANKEECSNLISKTSNLDI 87 (249)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHC----SSEEEEECCTTSHHHHHHHHHTCSCCSE
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhc----cCccEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 467778555 55667777777553 34689999999988877665542 3588888887764311 011246899
Q ss_pred EEECCCCC
Q 019692 213 ILLDPSCS 220 (337)
Q Consensus 213 IlvDpPCS 220 (337)
++..+...
T Consensus 88 li~~Ag~~ 95 (249)
T 3f9i_A 88 LVCNAGIT 95 (249)
T ss_dssp EEECCC--
T ss_pred EEECCCCC
Confidence 99877543
No 428
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=76.63 E-value=2.6 Score=35.42 Aligned_cols=69 Identities=17% Similarity=0.146 Sum_probs=47.3
Q ss_pred eEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCC
Q 019692 140 KVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
+||=.| |+|+.+.+++..+ ..+.+|++++.++..+..+. -.+++++.+|..+... ..+..+|.|+..+.
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-------~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag 71 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-------GATVATLVKEPLVLTE--ADLDSVDAVVDALS 71 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-------CTTSEEEECCGGGCCH--HHHTTCSEEEECCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-------CCCceEEecccccccH--hhcccCCEEEECCc
Confidence 455444 6788888887765 33468999999987765331 1358889999887654 22457899998554
No 429
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=76.49 E-value=14 Score=32.23 Aligned_cols=80 Identities=11% Similarity=0.087 Sum_probs=54.7
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHHh-CCCcEEEEeccCCCC----CCCC------
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLS-GAANIEVLHGDFLNL----DPKD------ 204 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~-~~~~l~~l~~~~~~~-g~~~v~~~~~D~~~~----~~~~------ 204 (337)
|.++|=.| |+|+.+.+++..+. .+.+|+.++. ++..++.+.+.++.. | .++.++..|..+. ....
T Consensus 11 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 88 (276)
T 1mxh_A 11 CPAAVITG-GARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARA-GSAVLCKGDLSLSSSLLDCCEDIIDCS 88 (276)
T ss_dssp CCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHST-TCEEEEECCCSSSTTHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcC-CceEEEeccCCCccccHHHHHHHHHHH
Confidence 55677444 56778888877653 3468999999 988888877777655 4 3588889998775 2100
Q ss_pred -CCCCCccEEEECCCC
Q 019692 205 -PAYSEVRAILLDPSC 219 (337)
Q Consensus 205 -~~~~~fD~IlvDpPC 219 (337)
..++.+|.++..+-.
T Consensus 89 ~~~~g~id~lv~nAg~ 104 (276)
T 1mxh_A 89 FRAFGRCDVLVNNASA 104 (276)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHhcCCCCEEEECCCC
Confidence 012368999987753
No 430
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=76.44 E-value=3.8 Score=36.31 Aligned_cols=80 Identities=11% Similarity=0.158 Sum_probs=55.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~-~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.+.++|=.|+ +|+.+.+++..+ ..+.+|+.++. +.+.++.+.+.+...|. ++.++..|..+..... ..+
T Consensus 28 ~~k~~lVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 105 (280)
T 4da9_A 28 ARPVAIVTGG-RRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGA-RVIFLRADLADLSSHQATVDAVVAEF 105 (280)
T ss_dssp CCCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTC-CEEEEECCTTSGGGHHHHHHHHHHHH
T ss_pred CCCEEEEecC-CCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 4667776664 556777777654 33468999995 78888888888877663 5889999988754211 112
Q ss_pred CCccEEEECCC
Q 019692 208 SEVRAILLDPS 218 (337)
Q Consensus 208 ~~fD~IlvDpP 218 (337)
+.+|.++..+-
T Consensus 106 g~iD~lvnnAg 116 (280)
T 4da9_A 106 GRIDCLVNNAG 116 (280)
T ss_dssp SCCCEEEEECC
T ss_pred CCCCEEEECCC
Confidence 46899998765
No 431
>3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae}
Probab=76.38 E-value=26 Score=34.16 Aligned_cols=85 Identities=16% Similarity=0.159 Sum_probs=53.8
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcC--CCCEEEEE-eCC-------------HHHHHHHHHHHHHhCCCcEEEEeccCC
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMK--GKGKIVAC-ELN-------------KERVRRLKDTIKLSGAANIEVLHGDFL 198 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~--~~g~V~av-D~~-------------~~~l~~l~~~~~~~g~~~v~~~~~D~~ 198 (337)
.+++.++| +.-|+|+++.+++..+- +...|+.+ +.+ ...++.+.+.++..|. ++.++..|..
T Consensus 248 ~~~~~~vL-ITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~-~v~~~~~Dvt 325 (525)
T 3qp9_A 248 WQADGTVL-VTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELADLGA-TATVVTCDLT 325 (525)
T ss_dssp SCTTSEEE-ESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHHHHTC-EEEEEECCTT
T ss_pred ecCCCEEE-EECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHHhcCC-EEEEEECCCC
Confidence 35677777 55577888888887653 22346766 776 3555666666777774 5889999987
Q ss_pred CCCC------CCCCCCCccEEEECCCCCC
Q 019692 199 NLDP------KDPAYSEVRAILLDPSCSG 221 (337)
Q Consensus 199 ~~~~------~~~~~~~fD~IlvDpPCSg 221 (337)
+... ....++.+|.|+..+--..
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~AGv~~ 354 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLPPTVD 354 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECCCCCC
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCcCCC
Confidence 6321 1112467899998765443
No 432
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=75.83 E-value=1.8 Score=39.25 Aligned_cols=69 Identities=14% Similarity=0.099 Sum_probs=44.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
.+.+||=.| |+|+.+.+++..+. .+..|++++.++.. .++.++.+|..+...-......+|.|+.
T Consensus 18 ~~~~vlVtG-atG~iG~~l~~~L~~~G~~V~~~~r~~~~-------------~~~~~~~~Dl~d~~~~~~~~~~~d~vih 83 (347)
T 4id9_A 18 GSHMILVTG-SAGRVGRAVVAALRTQGRTVRGFDLRPSG-------------TGGEEVVGSLEDGQALSDAIMGVSAVLH 83 (347)
T ss_dssp ---CEEEET-TTSHHHHHHHHHHHHTTCCEEEEESSCCS-------------SCCSEEESCTTCHHHHHHHHTTCSEEEE
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHhCCCEEEEEeCCCCC-------------CCccEEecCcCCHHHHHHHHhCCCEEEE
Confidence 456787555 77889888887653 33589999987643 3467888888764311111246899998
Q ss_pred CCCC
Q 019692 216 DPSC 219 (337)
Q Consensus 216 DpPC 219 (337)
-+..
T Consensus 84 ~A~~ 87 (347)
T 4id9_A 84 LGAF 87 (347)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 6653
No 433
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=75.52 E-value=7.7 Score=35.39 Aligned_cols=51 Identities=24% Similarity=0.356 Sum_probs=37.2
Q ss_pred hCCCCCCeEEeecCC--chhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACSA--PGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~aG--~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..+++|++||-.|+| .|..+.+++....+ .+|+++|.++++++.++ ++|..
T Consensus 166 ~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~G-a~Vi~~~~~~~~~~~~~----~~g~~ 218 (347)
T 1jvb_A 166 ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSG-ATIIGVDVREEAVEAAK----RAGAD 218 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHHTC-CEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEECCCccHHHHHHHHHHHcCC-CeEEEEcCCHHHHHHHH----HhCCC
Confidence 467899999999987 44455666665412 58999999999887764 35654
No 434
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=75.43 E-value=6.8 Score=33.42 Aligned_cols=80 Identities=15% Similarity=0.181 Sum_probs=51.7
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~av-D~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
+.+||=.| |+|+.+.+++..+. .+.+|+++ +.++..++.+.+.++..+ .++.++..|..+...-. ..++
T Consensus 5 ~~~vlItG-asggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 82 (247)
T 2hq1_A 5 GKTAIVTG-SSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAG-INVVVAKGDVKNPEDVENMVKTAMDAFG 82 (247)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTT-CCEEEEESCTTSHHHHHHHHHHHHHHHS
T ss_pred CcEEEEEC-CCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 56777555 56778888777653 34589888 667777777777776655 35888999987643110 0123
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.|+..+..
T Consensus 83 ~~d~vi~~Ag~ 93 (247)
T 2hq1_A 83 RIDILVNNAGI 93 (247)
T ss_dssp CCCEEEECC--
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 435
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=75.18 E-value=1.4 Score=40.41 Aligned_cols=70 Identities=17% Similarity=0.091 Sum_probs=41.2
Q ss_pred EEEE-eccCCCCCCCCCCCCCccEEEECCCCCCc-cccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCC
Q 019692 190 IEVL-HGDFLNLDPKDPAYSEVRAILLDPSCSGS-GTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSF 267 (337)
Q Consensus 190 v~~~-~~D~~~~~~~~~~~~~fD~IlvDpPCSg~-G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~ 267 (337)
..++ ++|........+ .++||+|++|||.... +.+.. .......-...|..+.++
T Consensus 39 ~~l~i~gD~l~~L~~l~-~~svDlI~tDPPY~~~~d~~~~----------------------~~~~~~~~~~~l~~~~rv 95 (319)
T 1eg2_A 39 RHVYDVCDCLDTLAKLP-DDSVQLIICDPPYNIMLADWDD----------------------HMDYIGWAKRWLAEAERV 95 (319)
T ss_dssp EEEEEECCHHHHHHTSC-TTCEEEEEECCCSBCCGGGGGT----------------------CSSHHHHHHHHHHHHHHH
T ss_pred ceEEECCcHHHHHHhCc-cCCcCEEEECCCCCCCCCCccC----------------------HHHHHHHHHHHHHHHHHH
Confidence 6677 999876433222 2579999999997432 11110 011222334666677778
Q ss_pred CCCcEEEEEcCCCCc
Q 019692 268 PGVERVVYSTCSIHQ 282 (337)
Q Consensus 268 ~~~G~lvYsTCS~~~ 282 (337)
+++|.++|..|+...
T Consensus 96 Lk~~G~i~i~~~~~~ 110 (319)
T 1eg2_A 96 LSPTGSIAIFGGLQY 110 (319)
T ss_dssp EEEEEEEEEEECSCC
T ss_pred cCCCeEEEEEcCccc
Confidence 888666666666543
No 436
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=74.97 E-value=5.1 Score=36.23 Aligned_cols=81 Identities=12% Similarity=0.178 Sum_probs=55.0
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCC----------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELN----------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD- 204 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~----------~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~- 204 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.+|.+ ...++.+.+.+...| .++.++..|..+.....
T Consensus 26 ~gk~vlVTG-as~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 26 DGRVVIVTG-AGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAG-GEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTCEEEETT-TTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTT-CEEEEECCCTTSHHHHHH
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHH
Confidence 466777666 5566777777755 334689999987 677787777777766 35888889987643110
Q ss_pred ------CCCCCccEEEECCCC
Q 019692 205 ------PAYSEVRAILLDPSC 219 (337)
Q Consensus 205 ------~~~~~fD~IlvDpPC 219 (337)
..++.+|.++..+-.
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCC
Confidence 112468999987653
No 437
>3gg2_A Sugar dehydrogenase, UDP-glucose/GDP-mannose dehydrogenase family; structural genomics, oxidoreductase, PSI-2; HET: UGA; 1.70A {Porphyromonas gingivalis}
Probab=74.93 E-value=16 Score=35.03 Aligned_cols=120 Identities=9% Similarity=0.063 Sum_probs=62.7
Q ss_pred eEEeecCCchhHHHHHHHHcCC-CCEEEEEeCCHHHHHHHHHH------------HHHh-CCCcEEEEeccCCCCCCCCC
Q 019692 140 KVLDACSAPGNKTVHLAALMKG-KGKIVACELNKERVRRLKDT------------IKLS-GAANIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~-~g~V~avD~~~~~l~~l~~~------------~~~~-g~~~v~~~~~D~~~~~~~~~ 205 (337)
+|-=+| .|..+..+|..+.. +..|+++|+++++++.+++. +++. ...++.+. .|..+.
T Consensus 4 kI~VIG--~G~vG~~lA~~La~~G~~V~~~D~~~~~v~~l~~g~~~i~e~gl~~~l~~~~~~~~l~~t-~d~~ea----- 75 (450)
T 3gg2_A 4 DIAVVG--IGYVGLVSATCFAELGANVRCIDTDRNKIEQLNSGTIPIYEPGLEKMIARNVKAGRLRFG-TEIEQA----- 75 (450)
T ss_dssp EEEEEC--CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHTCSCCCSTTHHHHHHHHHHTTSEEEE-SCHHHH-----
T ss_pred EEEEEC--cCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHcCCCcccCCCHHHHHHhhcccCcEEEE-CCHHHH-----
Confidence 444454 45666666655432 35899999999998887652 1100 01234332 222211
Q ss_pred CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCcccC
Q 019692 206 AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVEN 285 (337)
Q Consensus 206 ~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~~EN 285 (337)
....|+|++-.|-.-.. ...+|. ..+. ..++.....+++|.+|-..+|+.+...
T Consensus 76 -~~~aDvViiaVptp~~~--~~~~dl----------------~~v~-------~v~~~i~~~l~~g~iVV~~STv~pgt~ 129 (450)
T 3gg2_A 76 -VPEADIIFIAVGTPAGE--DGSADM----------------SYVL-------DAARSIGRAMSRYILIVTKSTVPVGSY 129 (450)
T ss_dssp -GGGCSEEEECCCCCBCT--TSSBCC----------------HHHH-------HHHHHHHHHCCSCEEEEECSCCCTTHH
T ss_pred -HhcCCEEEEEcCCCccc--CCCcCh----------------HHHH-------HHHHHHHhhCCCCCEEEEeeeCCCcch
Confidence 13478999876633110 012221 1121 222333334566777776778888877
Q ss_pred HHHHHHHh
Q 019692 286 EDVIKSVL 293 (337)
Q Consensus 286 e~vv~~~l 293 (337)
+.+.+.+.
T Consensus 130 ~~l~~~l~ 137 (450)
T 3gg2_A 130 RLIRKAIQ 137 (450)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77665443
No 438
>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G
Probab=74.71 E-value=15 Score=31.15 Aligned_cols=79 Identities=11% Similarity=0.141 Sum_probs=52.8
Q ss_pred CeEEeecCCchhHHHHHHHHcC-CCCEEEE-EeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 139 WKVLDACSAPGNKTVHLAALMK-GKGKIVA-CELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~-~~g~V~a-vD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
.+|| +.-|+|+.+.+++..+. ...+|++ .+.++..++.+.+.++..+ .++.++..|..+...-. ..++.
T Consensus 2 k~vl-VTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 79 (244)
T 1edo_A 2 PVVV-VTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYG-GQAITFGGDVSKEADVEAMMKTAIDAWGT 79 (244)
T ss_dssp CEEE-ETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHT-CEEEEEECCTTSHHHHHHHHHHHHHHSSC
T ss_pred CEEE-EeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcC-CcEEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 3555 44567888888887653 3357888 4888888887777777665 35888889987643110 01246
Q ss_pred ccEEEECCCC
Q 019692 210 VRAILLDPSC 219 (337)
Q Consensus 210 fD~IlvDpPC 219 (337)
+|.|+..+-.
T Consensus 80 id~li~~Ag~ 89 (244)
T 1edo_A 80 IDVVVNNAGI 89 (244)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999987653
No 439
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=74.50 E-value=10 Score=33.32 Aligned_cols=81 Identities=9% Similarity=0.092 Sum_probs=54.7
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCC------------HHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELN------------KERVRRLKDTIKLSGAANIEVLHGDFLNLDPK 203 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~------------~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~ 203 (337)
.|.++|=.|+ +|+.+.+++..+ ..+.+|+.+|.+ .+.++...+.++..|. ++.++..|..+....
T Consensus 9 ~~k~~lVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v 86 (281)
T 3s55_A 9 EGKTALITGG-ARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGR-RCISAKVDVKDRAAL 86 (281)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHH
T ss_pred CCCEEEEeCC-CchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCC-eEEEEeCCCCCHHHH
Confidence 4677886665 466777777755 334689999987 6777777777777663 588899998764311
Q ss_pred C-------CCCCCccEEEECCCC
Q 019692 204 D-------PAYSEVRAILLDPSC 219 (337)
Q Consensus 204 ~-------~~~~~fD~IlvDpPC 219 (337)
. ..++.+|.++..+--
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~ 109 (281)
T 3s55_A 87 ESFVAEAEDTLGGIDIAITNAGI 109 (281)
T ss_dssp HHHHHHHHHHHTCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCC
Confidence 0 112468999987653
No 440
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=74.46 E-value=5 Score=33.23 Aligned_cols=50 Identities=20% Similarity=0.229 Sum_probs=34.4
Q ss_pred hCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..+++|++||..|+ |.|..+..++... +.+|+++|.++++++.++ .+|..
T Consensus 34 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~~----~~g~~ 85 (198)
T 1pqw_A 34 GRLSPGERVLIHSATGGVGMAAVSIAKMI--GARIYTTAGSDAKREMLS----RLGVE 85 (198)
T ss_dssp SCCCTTCEEEETTTTSHHHHHHHHHHHHH--TCEEEEEESSHHHHHHHH----TTCCS
T ss_pred hCCCCCCEEEEeeCCChHHHHHHHHHHHc--CCEEEEEeCCHHHHHHHH----HcCCC
Confidence 46789999999985 3344455555543 358999999998876654 35654
No 441
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=74.29 E-value=6.6 Score=34.12 Aligned_cols=79 Identities=13% Similarity=0.123 Sum_probs=52.8
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.+|.+...++.+.+.+ + .++.++..|..+.... ...++
T Consensus 7 ~~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 7 EGKSALITG-SARGIGRAFAEAYVREGATVAIADIDIERARQAAAEI---G-PAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTCEEEEET-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---C-TTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 466777666 5567777777755 33468999999988877665544 3 3478888998764311 01134
Q ss_pred CccEEEECCCCC
Q 019692 209 EVRAILLDPSCS 220 (337)
Q Consensus 209 ~fD~IlvDpPCS 220 (337)
.+|.++..+--+
T Consensus 82 ~id~lv~~Ag~~ 93 (259)
T 4e6p_A 82 GLDILVNNAALF 93 (259)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 789999977543
No 442
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=74.17 E-value=14 Score=32.48 Aligned_cols=78 Identities=18% Similarity=0.218 Sum_probs=55.4
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
|.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+.+...|..++.++..|..+..... ..++.
T Consensus 28 ~k~vlITG-asggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 28 GKKVIVTG-ASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 66788565 5577787777654 334689999999999988888777777557889999987642110 01246
Q ss_pred ccEEEEC
Q 019692 210 VRAILLD 216 (337)
Q Consensus 210 fD~IlvD 216 (337)
+|.++..
T Consensus 107 iD~li~n 113 (286)
T 1xu9_A 107 LDMLILN 113 (286)
T ss_dssp CSEEEEC
T ss_pred CCEEEEC
Confidence 8999987
No 443
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=74.00 E-value=19 Score=30.65 Aligned_cols=79 Identities=10% Similarity=0.157 Sum_probs=51.6
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcE-EEEeccCCCCCCCCC------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANI-EVLHGDFLNLDPKDP------AYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v-~~~~~D~~~~~~~~~------~~~ 208 (337)
.+.+||=.| |+|+.+.+++..+. .+.+|++++.++..++.+.+.+ + .++ .++..|..+...... .++
T Consensus 10 ~~k~vlITG-asggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (254)
T 2wsb_A 10 DGACAAVTG-AGSGIGLEICRAFAASGARLILIDREAAALDRAAQEL---G-AAVAARIVADVTDAEAMTAAAAEAEAVA 84 (254)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHH---G-GGEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---c-ccceeEEEEecCCHHHHHHHHHHHHhhC
Confidence 356777665 56778888777653 3458999999988777665544 3 245 788888876431100 024
Q ss_pred CccEEEECCCCC
Q 019692 209 EVRAILLDPSCS 220 (337)
Q Consensus 209 ~fD~IlvDpPCS 220 (337)
.+|.|+..+...
T Consensus 85 ~id~li~~Ag~~ 96 (254)
T 2wsb_A 85 PVSILVNSAGIA 96 (254)
T ss_dssp CCCEEEECCCCC
T ss_pred CCcEEEECCccC
Confidence 689999877543
No 444
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=73.80 E-value=9 Score=35.17 Aligned_cols=52 Identities=21% Similarity=0.279 Sum_probs=37.8
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||=.|+|+ |..+.++|+.+.+ .+|+++|.++++++.++ ++|.+.
T Consensus 182 ~~~~~g~~VlV~GaG~vG~~avqlak~~~G-a~Vi~~~~~~~~~~~~~----~lGa~~ 234 (359)
T 1h2b_A 182 RTLYPGAYVAIVGVGGLGHIAVQLLKVMTP-ATVIALDVKEEKLKLAE----RLGADH 234 (359)
T ss_dssp TTCCTTCEEEEECCSHHHHHHHHHHHHHCC-CEEEEEESSHHHHHHHH----HTTCSE
T ss_pred cCCCCCCEEEEECCCHHHHHHHHHHHHcCC-CeEEEEeCCHHHHHHHH----HhCCCE
Confidence 5788999999998853 2345566666523 58999999999887764 467654
No 445
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=73.68 E-value=6.9 Score=35.63 Aligned_cols=50 Identities=24% Similarity=0.407 Sum_probs=38.6
Q ss_pred CCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 134 APKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 134 ~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
.+++|++||-.|+ |.|..+.+++... ..+|++++.++++++.++ .+|...
T Consensus 163 ~~~~g~~vlV~Gasg~iG~~~~~~a~~~--G~~Vi~~~~~~~~~~~~~----~~ga~~ 214 (343)
T 2eih_A 163 GVRPGDDVLVMAAGSGVSVAAIQIAKLF--GARVIATAGSEDKLRRAK----ALGADE 214 (343)
T ss_dssp CCCTTCEEEECSTTSTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HHTCSE
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCCCE
Confidence 6788999999998 5666777777765 358999999999888775 357553
No 446
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=73.65 E-value=16 Score=31.48 Aligned_cols=76 Identities=11% Similarity=0.146 Sum_probs=50.1
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
|.+||=.| |+|+.+.+++..+. ...+|+.++.++..++.+.+.+ + .++.++..|..+..... ..++.
T Consensus 6 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 80 (253)
T 1hxh_A 6 GKVALVTG-GASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAEL---G-ERSMFVRHDVSSEADWTLVMAAVQRRLGT 80 (253)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-TTEEEECCCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-CceEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 55677555 56678888777653 3458999999988777665544 4 35888889987643110 01246
Q ss_pred ccEEEECCC
Q 019692 210 VRAILLDPS 218 (337)
Q Consensus 210 fD~IlvDpP 218 (337)
+|.++..+-
T Consensus 81 id~lv~~Ag 89 (253)
T 1hxh_A 81 LNVLVNNAG 89 (253)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 799998765
No 447
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=73.63 E-value=14 Score=33.85 Aligned_cols=56 Identities=23% Similarity=0.317 Sum_probs=34.1
Q ss_pred hCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcE
Q 019692 133 LAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANI 190 (337)
Q Consensus 133 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v 190 (337)
..+++|++||=.|+ |.|..+.++|+.++ ...|..++.++..- ...+.++++|...+
T Consensus 163 ~~~~~g~~VlV~Ga~G~vG~~aiqlak~~G-a~vi~~~~~~~~~~-~~~~~~~~lGa~~v 220 (357)
T 1zsy_A 163 EQLQPGDSVIQNASNSGVGQAVIQIAAALG-LRTINVVRDRPDIQ-KLSDRLKSLGAEHV 220 (357)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT-CEEEEEECCCSCHH-HHHHHHHHTTCSEE
T ss_pred hccCCCCEEEEeCCcCHHHHHHHHHHHHcC-CEEEEEecCccchH-HHHHHHHhcCCcEE
Confidence 46789999999886 45667788888763 22344555544321 11234456787643
No 448
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=73.12 E-value=6.1 Score=36.12 Aligned_cols=51 Identities=24% Similarity=0.173 Sum_probs=36.9
Q ss_pred hCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+ +|++||-.|+|+ |..+.++|+.. +..+|+++|.++++++.++ ++|...
T Consensus 164 ~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~----~~Ga~~ 215 (348)
T 2d8a_A 164 GPI-SGKSVLITGAGPLGLLGIAVAKAS-GAYPVIVSEPSDFRRELAK----KVGADY 215 (348)
T ss_dssp SCC-TTCCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHHHHH----HHTCSE
T ss_pred cCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHH----HhCCCE
Confidence 456 899999999854 45566667664 3238999999998887665 457653
No 449
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=73.03 E-value=6.3 Score=36.01 Aligned_cols=50 Identities=14% Similarity=0.121 Sum_probs=36.0
Q ss_pred hCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
+.+++|++||-.|+ |.|..+.+++... ..+|+++|.++++++.++ .+|..
T Consensus 165 ~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~--Ga~V~~~~~~~~~~~~~~----~~g~~ 216 (347)
T 2hcy_A 165 ANLMAGHWVAISGAAGGLGSLAVQYAKAM--GYRVLGIDGGEGKEELFR----SIGGE 216 (347)
T ss_dssp TTCCTTCEEEEETTTSHHHHHHHHHHHHT--TCEEEEEECSTTHHHHHH----HTTCC
T ss_pred cCCCCCCEEEEECCCchHHHHHHHHHHHC--CCcEEEEcCCHHHHHHHH----HcCCc
Confidence 36789999999998 3455566666654 358999999988876554 35654
No 450
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=72.66 E-value=6.3 Score=35.72 Aligned_cols=52 Identities=25% Similarity=0.213 Sum_probs=37.6
Q ss_pred HhCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 132 ALAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 132 ~l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
...+++|++||-.|+ |.|..+.+++... ..+|++++.++++++.+. +.+|..
T Consensus 144 ~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~---~~~g~~ 197 (336)
T 4b7c_A 144 VGQPKNGETVVISGAAGAVGSVAGQIARLK--GCRVVGIAGGAEKCRFLV---EELGFD 197 (336)
T ss_dssp TTCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH---HTTCCS
T ss_pred hcCCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH---HHcCCC
Confidence 356889999999887 3455666666654 359999999998877663 345664
No 451
>1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A*
Probab=72.50 E-value=4.9 Score=37.08 Aligned_cols=81 Identities=17% Similarity=0.191 Sum_probs=47.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHH-----------------HHHHHHHHhCCCcEEEEeccCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVR-----------------RLKDTIKLSGAANIEVLHGDFL 198 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~-----------------~l~~~~~~~g~~~v~~~~~D~~ 198 (337)
.+.+|| +.-|+|..+.+++..+ ..+.+|+++|....... .+.+.....+ .++.++.+|..
T Consensus 10 ~~~~vl-VTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~v~~~~~Dl~ 87 (404)
T 1i24_A 10 HGSRVM-VIGGDGYCGWATALHLSKKNYEVCIVDNLVRRLFDHQLGLESLTPIASIHDRISRWKALTG-KSIELYVGDIC 87 (404)
T ss_dssp --CEEE-EETTTSHHHHHHHHHHHHTTCEEEEEECCHHHHHHHHHTCCCSSCCCCHHHHHHHHHHHHC-CCCEEEESCTT
T ss_pred CCCeEE-EeCCCcHHHHHHHHHHHhCCCeEEEEEecCccccccccccccccccchhhhhhhhHhhccC-CceEEEECCCC
Confidence 467888 5557899999988765 33458999998754321 2222111222 45888899987
Q ss_pred CCCCCCCCCC--CccEEEECCCC
Q 019692 199 NLDPKDPAYS--EVRAILLDPSC 219 (337)
Q Consensus 199 ~~~~~~~~~~--~fD~IlvDpPC 219 (337)
+...-..... .+|.|+.-+.-
T Consensus 88 d~~~~~~~~~~~~~D~Vih~A~~ 110 (404)
T 1i24_A 88 DFEFLAESFKSFEPDSVVHFGEQ 110 (404)
T ss_dssp SHHHHHHHHHHHCCSEEEECCSC
T ss_pred CHHHHHHHHhccCCCEEEECCCC
Confidence 5421100012 38999986653
No 452
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=72.49 E-value=10 Score=34.89 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=38.7
Q ss_pred hCCCCCCeEEeec--CCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPKPGWKVLDAC--SAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~~g~~VLDl~--aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..+++|++||-.| .|.|..+.+++... ..+|++++.++++++.+++ +|...
T Consensus 159 ~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~--Ga~Vi~~~~~~~~~~~~~~----~Ga~~ 211 (362)
T 2c0c_A 159 GGLSEGKKVLVTAAAGGTGQFAMQLSKKA--KCHVIGTCSSDEKSAFLKS----LGCDR 211 (362)
T ss_dssp TCCCTTCEEEETTTTBTTHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH----TTCSE
T ss_pred cCCCCCCEEEEeCCCcHHHHHHHHHHHhC--CCEEEEEECCHHHHHHHHH----cCCcE
Confidence 4688999999998 34566677777765 3589999999988877654 67653
No 453
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=72.35 E-value=14 Score=31.68 Aligned_cols=81 Identities=11% Similarity=0.141 Sum_probs=53.6
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeC-CHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACEL-NKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~-~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
+.++|=.| |+|+.+.+++..+. .+.+|+.++. +.+.++.+.+.++..|. ++.++..|..+..... ..++
T Consensus 4 ~k~~lVTG-as~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~g 81 (246)
T 3osu_A 4 TKSALVTG-ASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGV-DSFAIQANVADADEVKAMIKEVVSQFG 81 (246)
T ss_dssp SCEEEETT-CSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTS-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCC-cEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 45566444 56778888777653 3458888877 66788888888877764 4788889987643110 1124
Q ss_pred CccEEEECCCCC
Q 019692 209 EVRAILLDPSCS 220 (337)
Q Consensus 209 ~fD~IlvDpPCS 220 (337)
.+|.++..+--+
T Consensus 82 ~id~lv~nAg~~ 93 (246)
T 3osu_A 82 SLDVLVNNAGIT 93 (246)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999877543
No 454
>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2
Probab=72.31 E-value=11 Score=32.45 Aligned_cols=78 Identities=18% Similarity=0.196 Sum_probs=50.3
Q ss_pred CCeEEeecCCchhHHHHHHHHcCCC----CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC-------C
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKGK----GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP-------A 206 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~~----g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~-------~ 206 (337)
+.+||=.| |+|+.+.+++..+... .+|++++.+....+.+++..+. + .++.++..|+.+...... .
T Consensus 21 ~k~vlITG-asggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~-~-~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 21 MNSILITG-CNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKN-H-SNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp CSEEEESC-CSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHH-C-TTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCEEEEEC-CCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhcc-C-CceEEEEecCCChHHHHHHHHHHHHh
Confidence 55677555 5678888888766433 5899999987766554433332 3 358899999876542110 0
Q ss_pred CC--CccEEEECCC
Q 019692 207 YS--EVRAILLDPS 218 (337)
Q Consensus 207 ~~--~fD~IlvDpP 218 (337)
++ .+|.|+..+-
T Consensus 98 ~g~~~id~li~~Ag 111 (267)
T 1sny_A 98 TKDQGLNVLFNNAG 111 (267)
T ss_dssp HGGGCCSEEEECCC
T ss_pred cCCCCccEEEECCC
Confidence 11 5899998764
No 455
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=72.28 E-value=8.3 Score=33.31 Aligned_cols=77 Identities=12% Similarity=0.148 Sum_probs=47.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
|.+||=.| |+|+.+.+++..+. .+.+|+.++.++. +...+.++..| .++.++..|..+...-. ..++.
T Consensus 4 ~k~vlVTG-as~giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (255)
T 2q2v_A 4 GKTALVTG-STSGIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHG-VKAVHHPADLSDVAQIEALFALAEREFGG 79 (255)
T ss_dssp TCEEEESS-CSSHHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTS-CCEEEECCCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcC-CceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 55666555 56778888877653 3458999998765 33344444444 34778888887643110 01236
Q ss_pred ccEEEECCC
Q 019692 210 VRAILLDPS 218 (337)
Q Consensus 210 fD~IlvDpP 218 (337)
+|.++..+-
T Consensus 80 id~lv~~Ag 88 (255)
T 2q2v_A 80 VDILVNNAG 88 (255)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899998765
No 456
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=72.19 E-value=6.6 Score=34.50 Aligned_cols=81 Identities=10% Similarity=0.077 Sum_probs=52.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~av-D~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.++|=.|+ +|+.+.+++..+. .+.+|+.+ ..+....+.+.+.++..|. ++.++..|..+..... ..+
T Consensus 26 ~~k~~lVTGa-s~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dl~~~~~v~~~~~~~~~~~ 103 (267)
T 3u5t_A 26 TNKVAIVTGA-SRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGG-KALTAQADVSDPAAVRRLFATAEEAF 103 (267)
T ss_dssp -CCEEEEESC-SSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-eEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3667776665 4556777666542 23577776 5577778888887777763 5888889987643110 112
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.++.++--
T Consensus 104 g~iD~lvnnAG~ 115 (267)
T 3u5t_A 104 GGVDVLVNNAGI 115 (267)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987653
No 457
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=71.96 E-value=3.1 Score=36.64 Aligned_cols=77 Identities=13% Similarity=0.092 Sum_probs=50.2
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
+.+|| +.-|+|+.+.+++..+. .+.+|++++.+...++.+.+ ..+ .++.++..|..+..... ..++.
T Consensus 5 ~k~vl-VTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~---~~~-~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~ 79 (281)
T 3m1a_A 5 AKVWL-VTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVA---AYP-DRAEAISLDVTDGERIDVVAADVLARYGR 79 (281)
T ss_dssp CCEEE-ETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHH---HCT-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CcEEE-EECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH---hcc-CCceEEEeeCCCHHHHHHHHHHHHHhCCC
Confidence 45666 44566778888877653 34689999999887665543 233 35889999987643110 01236
Q ss_pred ccEEEECCCC
Q 019692 210 VRAILLDPSC 219 (337)
Q Consensus 210 fD~IlvDpPC 219 (337)
+|.|+..+--
T Consensus 80 id~lv~~Ag~ 89 (281)
T 3m1a_A 80 VDVLVNNAGR 89 (281)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987653
No 458
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=71.93 E-value=14 Score=31.35 Aligned_cols=77 Identities=16% Similarity=0.134 Sum_probs=49.2
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC---CCCCCCccE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK---DPAYSEVRA 212 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~---~~~~~~fD~ 212 (337)
.+.+||=.| |+|+.+.+++..+ ..+.+|++++.++..++.+.+. . .+++++..|..+.... ...++.+|.
T Consensus 6 ~~~~vlVTG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~---~--~~~~~~~~D~~~~~~~~~~~~~~~~id~ 79 (244)
T 1cyd_A 6 SGLRALVTG-AGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKE---C--PGIEPVCVDLGDWDATEKALGGIGPVDL 79 (244)
T ss_dssp TTCEEEEES-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---S--TTCEEEECCTTCHHHHHHHHTTCCCCSE
T ss_pred CCCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHh---c--cCCCcEEecCCCHHHHHHHHHHcCCCCE
Confidence 366777555 5677888887765 3346899999998776654432 1 2456678887764210 112356899
Q ss_pred EEECCCC
Q 019692 213 ILLDPSC 219 (337)
Q Consensus 213 IlvDpPC 219 (337)
|+..+.-
T Consensus 80 vi~~Ag~ 86 (244)
T 1cyd_A 80 LVNNAAL 86 (244)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9987653
No 459
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=71.75 E-value=28 Score=30.72 Aligned_cols=124 Identities=14% Similarity=0.097 Sum_probs=71.5
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHH-HHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKE-RVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~-~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~ 207 (337)
.|.+||=.|+ +|+.+.+++..+. .+.+|+.++.+.. ..+.+.+.++..| .++.++..|..+.... ...+
T Consensus 46 ~gk~vlVTGa-s~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 46 KGKNVLITGG-DSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEG-VKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTT-CCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcC-CcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3667886665 5667777777553 3468999998865 4555555555555 3588899998764311 0112
Q ss_pred CCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHH----HHHHHHHHHHhCCCC-CcEEEEEcC
Q 019692 208 SEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLS----AFQKKALRHALSFPG-VERVVYSTC 278 (337)
Q Consensus 208 ~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~----~~Q~~lL~~A~~~~~-~G~lvYsTC 278 (337)
+.+|.++..+--.... .. + ...+.++..+.- .-...+++.++..++ .|.||+.+.
T Consensus 124 g~iD~lvnnAg~~~~~---~~--~-----------~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS 183 (291)
T 3ijr_A 124 GSLNILVNNVAQQYPQ---QG--L-----------EYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTAS 183 (291)
T ss_dssp SSCCEEEECCCCCCCC---SS--G-----------GGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECC
T ss_pred CCCCEEEECCCCcCCC---CC--c-----------ccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEec
Confidence 4689999876422110 00 0 001333333322 334566777777655 478887654
No 460
>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}
Probab=71.74 E-value=11 Score=33.61 Aligned_cols=65 Identities=15% Similarity=0.041 Sum_probs=38.4
Q ss_pred CeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECC
Q 019692 139 WKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDp 217 (337)
.+|.=+|+ |..+..++..+. ....|+.+|.+++.++.+.+ .|.. ....+..+. ....|+|++-.
T Consensus 8 ~~I~iIG~--G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~~----~g~~---~~~~~~~e~------~~~aDvvi~~v 72 (303)
T 3g0o_A 8 FHVGIVGL--GSMGMGAARSCLRAGLSTWGADLNPQACANLLA----EGAC---GAAASAREF------AGVVDALVILV 72 (303)
T ss_dssp CEEEEECC--SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHH----TTCS---EEESSSTTT------TTTCSEEEECC
T ss_pred CeEEEECC--CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHH----cCCc---cccCCHHHH------HhcCCEEEEEC
Confidence 45666655 455555555442 23589999999998877654 3532 112333222 24579999866
Q ss_pred C
Q 019692 218 S 218 (337)
Q Consensus 218 P 218 (337)
|
T Consensus 73 p 73 (303)
T 3g0o_A 73 V 73 (303)
T ss_dssp S
T ss_pred C
Confidence 6
No 461
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=71.58 E-value=11 Score=32.16 Aligned_cols=80 Identities=9% Similarity=0.140 Sum_probs=51.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHH-HHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTI-KLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~-~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
+.+||=.| |+|+.+.+++..+. .+.+|++++.++..++.+.+.+ +..+ .++.++..|..+...-. ..++
T Consensus 2 ~k~vlItG-asggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTG-ASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYA-DKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTG-GGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcC-CcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 34566555 56778888777553 3458999999988877766555 3223 35888999987643110 0123
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.|+..+.-
T Consensus 80 ~id~li~~Ag~ 90 (250)
T 2cfc_A 80 AIDVLVNNAGI 90 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 462
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=71.49 E-value=12 Score=33.39 Aligned_cols=119 Identities=10% Similarity=0.057 Sum_probs=70.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.|..+|=.|++.| .+..+|..+ ....+|+.+|.+.+.++.+.+. .|- ++..+..|..+.... ...++
T Consensus 28 ~gKvalVTGas~G-IG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~---~g~-~~~~~~~Dv~~~~~v~~~~~~~~~~~G 102 (273)
T 4fgs_A 28 NAKIAVITGATSG-IGLAAAKRFVAEGARVFITGRRKDVLDAAIAE---IGG-GAVGIQADSANLAELDRLYEKVKAEAG 102 (273)
T ss_dssp TTCEEEEESCSSH-HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---HCT-TCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCcCCH-HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHH---cCC-CeEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4777887776655 666666654 3346999999999887766443 453 466778888764311 11246
Q ss_pred CccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHH----HHHHHHHHhCCCCC-cEEEEEc
Q 019692 209 EVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAF----QKKALRHALSFPGV-ERVVYST 277 (337)
Q Consensus 209 ~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~----Q~~lL~~A~~~~~~-G~lvYsT 277 (337)
+.|.++.++--...+-+ ...+.++..+.-+. ...+.+.++..++. |.+|..+
T Consensus 103 ~iDiLVNNAG~~~~~~~-----------------~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInis 159 (273)
T 4fgs_A 103 RIDVLFVNAGGGSMLPL-----------------GEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTG 159 (273)
T ss_dssp CEEEEEECCCCCCCCCT-----------------TSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEEC
T ss_pred CCCEEEECCCCCCCCCh-----------------hhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEe
Confidence 78999987742211110 11244544444332 34556667766554 7766653
No 463
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=71.47 E-value=3.6 Score=35.92 Aligned_cols=79 Identities=13% Similarity=0.102 Sum_probs=48.6
Q ss_pred CCeEEeecCC-chhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSA-PGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG-~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
|.+||=.|++ +|+.+.+++..+. .+.+|+.++.+++.-+.+++..+..+ .+.++..|..+..... ..++
T Consensus 8 ~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~--~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (261)
T 2wyu_A 8 GKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALG--GALLFRADVTQDEELDALFAGVKEAFG 85 (261)
T ss_dssp TCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTT--CCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcC--CcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 6678888876 3778877777552 23689999998752222332223333 3678888887643110 0124
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.++..+-
T Consensus 86 ~iD~lv~~Ag 95 (261)
T 2wyu_A 86 GLDYLVHAIA 95 (261)
T ss_dssp SEEEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998775
No 464
>3ojo_A CAP5O; rossmann fold, complex with cofactor NAD and EU(PDC)3, oxidi conformation, oxidoreductase; HET: NAD PDC; 2.50A {Staphylococcus aureus} PDB: 3ojl_A*
Probab=71.44 E-value=36 Score=32.41 Aligned_cols=114 Identities=11% Similarity=0.203 Sum_probs=63.2
Q ss_pred CchhHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHH------------HHHh-CCCcEEEEeccCCCCCCCCCCCCCccE
Q 019692 147 APGNKTVHLAALMKGK-GKIVACELNKERVRRLKDT------------IKLS-GAANIEVLHGDFLNLDPKDPAYSEVRA 212 (337)
Q Consensus 147 G~G~kt~~la~~~~~~-g~V~avD~~~~~l~~l~~~------------~~~~-g~~~v~~~~~D~~~~~~~~~~~~~fD~ 212 (337)
|.|+.++.+|..+... ..|+++|+++++++.+++. +++. .-.++.+.. |. ...|+
T Consensus 18 GlGyvGlp~A~~La~~G~~V~~~D~~~~kv~~L~~g~~pi~epgl~~ll~~~~~~g~l~~tt-d~----------~~aDv 86 (431)
T 3ojo_A 18 GLGYIGLPTSIMFAKHGVDVLGVDINQQTIDKLQNGQISIEEPGLQEVYEEVLSSGKLKVST-TP----------EASDV 86 (431)
T ss_dssp CCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHHTTCCSSCCTTHHHHHHHHHHTTCEEEES-SC----------CCCSE
T ss_pred eeCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHCCCCCcCCCCHHHHHHhhcccCceEEeC-ch----------hhCCE
Confidence 4555555555554333 5899999999999987652 1110 012344432 31 23689
Q ss_pred EEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCcccCHHHHHHH
Q 019692 213 ILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292 (337)
Q Consensus 213 IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~~ENe~vv~~~ 292 (337)
||+-.|-....--.+.||. +.+ ....+...+.+++|.+|-...|+.|.-.+.+.+.+
T Consensus 87 vii~VpTp~~~~~~~~~Dl----------------~~V-------~~~~~~i~~~l~~g~iVV~~STV~pgtt~~v~~~i 143 (431)
T 3ojo_A 87 FIIAVPTPNNDDQYRSCDI----------------SLV-------MRALDSILPFLKKGNTIIVESTIAPKTMDDFVKPV 143 (431)
T ss_dssp EEECCCCCBCSSSSCBBCC----------------HHH-------HHHHHHHGGGCCTTEEEEECSCCCTTHHHHTHHHH
T ss_pred EEEEeCCCccccccCCccH----------------HHH-------HHHHHHHHHhCCCCCEEEEecCCChhHHHHHHHHH
Confidence 9987763321000012332 111 12223444555667655555688998889988887
Q ss_pred hc
Q 019692 293 LP 294 (337)
Q Consensus 293 l~ 294 (337)
++
T Consensus 144 ~e 145 (431)
T 3ojo_A 144 IE 145 (431)
T ss_dssp HH
T ss_pred HH
Confidence 75
No 465
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=71.43 E-value=12 Score=32.90 Aligned_cols=79 Identities=11% Similarity=0.110 Sum_probs=50.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHH-HHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKE-RVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~-~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
|.++|=.| |+|+.+.+++..+. .+.+|+.++.+.. ..+.+.+.++..|. ++.++..|..+..... ..++
T Consensus 29 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 29 GKVALVTG-AGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGS-DAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TCEEEETT-TTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCC-CeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 56777555 56778888777653 3458999998754 45555666666653 4788888877543110 0124
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.++..+-
T Consensus 107 ~iD~lv~~Ag 116 (283)
T 1g0o_A 107 KLDIVCSNSG 116 (283)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998764
No 466
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=71.34 E-value=7.1 Score=35.26 Aligned_cols=50 Identities=22% Similarity=0.245 Sum_probs=36.8
Q ss_pred hCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..+++|++||-.|+ |.|..+.++++..+ .+|++++.++++++.++ ++|..
T Consensus 136 ~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~G--a~Vi~~~~~~~~~~~~~----~~Ga~ 187 (325)
T 3jyn_A 136 YQVKPGEIILFHAAAGGVGSLACQWAKALG--AKLIGTVSSPEKAAHAK----ALGAW 187 (325)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHHT--CEEEEEESSHHHHHHHH----HHTCS
T ss_pred cCCCCCCEEEEEcCCcHHHHHHHHHHHHCC--CEEEEEeCCHHHHHHHH----HcCCC
Confidence 46789999998873 34556666777652 58999999999988765 35754
No 467
>2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa}
Probab=71.25 E-value=4 Score=36.35 Aligned_cols=77 Identities=13% Similarity=0.096 Sum_probs=42.4
Q ss_pred CeEEeecCCchhHHHHHHHHc-CCCCEEEEEeC-CHHHHHHHHHHHHHhC--CCcEEEEeccCCCCCCCCCCCCCccEEE
Q 019692 139 WKVLDACSAPGNKTVHLAALM-KGKGKIVACEL-NKERVRRLKDTIKLSG--AANIEVLHGDFLNLDPKDPAYSEVRAIL 214 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~-~~~~l~~l~~~~~~~g--~~~v~~~~~D~~~~~~~~~~~~~fD~Il 214 (337)
.+|| +.-|+|+.+.++++.+ ..+..|++++. ++.....+.. +..+. ..++.++.+|..+...-......+|.|+
T Consensus 2 k~vl-VTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~vi 79 (322)
T 2p4h_X 2 GRVC-VTGGTGFLGSWIIKSLLENGYSVNTTIRADPERKRDVSF-LTNLPGASEKLHFFNADLSNPDSFAAAIEGCVGIF 79 (322)
T ss_dssp CEEE-EESTTSHHHHHHHHHHHHTTCEEEEECCCC----CCCHH-HHTSTTHHHHEEECCCCTTCGGGGHHHHTTCSEEE
T ss_pred CEEE-EECChhHHHHHHHHHHHHCCCEEEEEEeCCccchhHHHH-HHhhhccCCceEEEecCCCCHHHHHHHHcCCCEEE
Confidence 4566 4557899998888755 33458998877 5432111111 11111 0247888888876432111123579999
Q ss_pred ECC
Q 019692 215 LDP 217 (337)
Q Consensus 215 vDp 217 (337)
.-+
T Consensus 80 h~A 82 (322)
T 2p4h_X 80 HTA 82 (322)
T ss_dssp ECC
T ss_pred EcC
Confidence 876
No 468
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=71.13 E-value=1 Score=42.23 Aligned_cols=79 Identities=8% Similarity=0.039 Sum_probs=49.1
Q ss_pred CCeEEeecCCchhHHHHHHHH---------------cCCCCEEEEEeCCHHHHHHHHHHHHHhCC-CcEEEEeccCCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAAL---------------MKGKGKIVACELNKERVRRLKDTIKLSGA-ANIEVLHGDFLNLD 201 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~---------------~~~~g~V~avD~~~~~l~~l~~~~~~~g~-~~v~~~~~D~~~~~ 201 (337)
.-+|+|+||++|..|+.+... -.+...|+..|+-......+-+.+....- .+-.++.+....+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357999999999988765443 12346799999988888777776643210 02245555544433
Q ss_pred CCCCCCCCccEEEEC
Q 019692 202 PKDPAYSEVRAILLD 216 (337)
Q Consensus 202 ~~~~~~~~fD~IlvD 216 (337)
...-..+++|+|+..
T Consensus 132 ~rlfp~~S~d~v~Ss 146 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSS 146 (359)
T ss_dssp SCCSCTTCBSCEEEE
T ss_pred hccCCCCceEEEEeh
Confidence 222123679999764
No 469
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=71.07 E-value=4.8 Score=31.58 Aligned_cols=72 Identities=17% Similarity=0.160 Sum_probs=45.4
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-CCCCCCccEEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAILL 215 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~~fD~Ilv 215 (337)
.++|+=+|+ |..+..+++.+. .+..|+++|.++++++.+++ .| +.++.+|..+...- ......+|.|++
T Consensus 7 ~~~viIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~~----~g---~~~i~gd~~~~~~l~~a~i~~ad~vi~ 77 (140)
T 3fwz_A 7 CNHALLVGY--GRVGSLLGEKLLASDIPLVVIETSRTRVDELRE----RG---VRAVLGNAANEEIMQLAHLECAKWLIL 77 (140)
T ss_dssp CSCEEEECC--SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHH----TT---CEEEESCTTSHHHHHHTTGGGCSEEEE
T ss_pred CCCEEEECc--CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH----cC---CCEEECCCCCHHHHHhcCcccCCEEEE
Confidence 356766666 555666666553 23589999999999887653 34 56788887654210 011246888887
Q ss_pred CCC
Q 019692 216 DPS 218 (337)
Q Consensus 216 DpP 218 (337)
-.|
T Consensus 78 ~~~ 80 (140)
T 3fwz_A 78 TIP 80 (140)
T ss_dssp CCS
T ss_pred ECC
Confidence 544
No 470
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=70.80 E-value=7.3 Score=33.76 Aligned_cols=80 Identities=6% Similarity=0.006 Sum_probs=51.6
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHH--HHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKER--VRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~--l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
|.++|=.| |+|+.+.+++..+. .+.+|+.++.++.. ++.+.+.++..+ .++.++..|..+..... ..+
T Consensus 2 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTG-GAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAAD-QKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTT-CCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeC-CCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcC-CcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 34566555 55667777776542 24689999998877 776666665544 35888889987643110 012
Q ss_pred CCccEEEECCCC
Q 019692 208 SEVRAILLDPSC 219 (337)
Q Consensus 208 ~~fD~IlvDpPC 219 (337)
+.+|.++..+.-
T Consensus 80 g~iD~lv~nAg~ 91 (258)
T 3a28_C 80 GGFDVLVNNAGI 91 (258)
T ss_dssp TCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 468999987653
No 471
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=70.77 E-value=3.9 Score=33.54 Aligned_cols=72 Identities=18% Similarity=0.175 Sum_probs=43.8
Q ss_pred CCeEEeecCCchhHHHHHHHHcCC--CCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCC-CCC-CCCCccEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKG--KGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDP-KDP-AYSEVRAI 213 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~--~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~-~~~-~~~~fD~I 213 (337)
+++|+=+|+ |..+..+++.+.. +..|+++|.++++++.++ ..|. .++.+|..+... ... ....+|.|
T Consensus 39 ~~~v~IiG~--G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~----~~g~---~~~~gd~~~~~~l~~~~~~~~ad~v 109 (183)
T 3c85_A 39 HAQVLILGM--GRIGTGAYDELRARYGKISLGIEIREEAAQQHR----SEGR---NVISGDATDPDFWERILDTGHVKLV 109 (183)
T ss_dssp TCSEEEECC--SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH----HTTC---CEEECCTTCHHHHHTBCSCCCCCEE
T ss_pred CCcEEEECC--CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH----HCCC---CEEEcCCCCHHHHHhccCCCCCCEE
Confidence 667887765 5556666665532 357999999998887654 3453 456677654210 000 13468999
Q ss_pred EECCC
Q 019692 214 LLDPS 218 (337)
Q Consensus 214 lvDpP 218 (337)
++-.|
T Consensus 110 i~~~~ 114 (183)
T 3c85_A 110 LLAMP 114 (183)
T ss_dssp EECCS
T ss_pred EEeCC
Confidence 97433
No 472
>1e2b_A Enzyme IIB-cellobiose; phosphotransferase system, transferas transport, phosphorylation; NMR {Escherichia coli} SCOP: c.44.2.1 PDB: 1iib_A 1h9c_A* 2wwv_D 2wy2_D
Probab=70.76 E-value=2.6 Score=32.06 Aligned_cols=55 Identities=15% Similarity=0.135 Sum_probs=37.7
Q ss_pred eEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCC
Q 019692 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
+|| ++||.|..|..+++ .+++.++..|++ +++...+..++... ...+|+|++-|.
T Consensus 5 kIl-l~Cg~G~sTS~l~~-------------------k~~~~~~~~gi~-~~i~a~~~~~~~~~---~~~~Dvil~~pq 59 (106)
T 1e2b_A 5 HIY-LFSSAGMSTSLLVS-------------------KMRAQAEKYEVP-VIIEAFPETLAGEK---GQNADVVLLGPQ 59 (106)
T ss_dssp EEE-EECSSSTTTHHHHH-------------------HHHHHHHHSCCS-EEEEEECSSSTTHH---HHHCSEEEECTT
T ss_pred EEE-EECCCchhHHHHHH-------------------HHHHHHHHCCCC-eEEEEecHHHHHhh---ccCCCEEEEccc
Confidence 455 78888877765544 356677788886 77777777665432 145899998776
No 473
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=70.73 E-value=4.5 Score=31.01 Aligned_cols=73 Identities=16% Similarity=0.228 Sum_probs=42.9
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-CCCCCCccEEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-DPAYSEVRAILL 215 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-~~~~~~fD~Ilv 215 (337)
+.+|+=+|+ |..+..++..+. .+..|+.+|.+++.++.+++. .| +.++.+|..+...- ......+|.|++
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~---~~---~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAE---ID---ALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH---CS---SEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHh---cC---cEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 356776655 666666666543 235899999999887665432 23 34566776432110 001246899998
Q ss_pred CCC
Q 019692 216 DPS 218 (337)
Q Consensus 216 DpP 218 (337)
-.|
T Consensus 76 ~~~ 78 (140)
T 1lss_A 76 VTG 78 (140)
T ss_dssp CCS
T ss_pred eeC
Confidence 654
No 474
>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*
Probab=70.63 E-value=3.6 Score=37.96 Aligned_cols=75 Identities=5% Similarity=-0.054 Sum_probs=46.2
Q ss_pred CCeEEeecCCchhHHHHHHHHcC-CC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEE
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK-GK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILL 215 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~-~~-g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~Ilv 215 (337)
+.+||=.| |+|..+.+++..+. .+ .+|++++.+..... +.+. ...++.++.+|..+...-......+|.|+.
T Consensus 32 ~~~ilVtG-atG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~---~~l~--~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih 105 (377)
T 2q1s_A 32 NTNVMVVG-GAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK---INVP--DHPAVRFSETSITDDALLASLQDEYDYVFH 105 (377)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG---GGSC--CCTTEEEECSCTTCHHHHHHCCSCCSEEEE
T ss_pred CCEEEEEC-CccHHHHHHHHHHHHcCCceEEEEECCCCCch---hhcc--CCCceEEEECCCCCHHHHHHHhhCCCEEEE
Confidence 56787554 67888888877653 33 58999998754311 1111 124688999998764311111346899998
Q ss_pred CCC
Q 019692 216 DPS 218 (337)
Q Consensus 216 DpP 218 (337)
-+.
T Consensus 106 ~A~ 108 (377)
T 2q1s_A 106 LAT 108 (377)
T ss_dssp CCC
T ss_pred CCC
Confidence 654
No 475
>2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae}
Probab=70.63 E-value=8.5 Score=37.56 Aligned_cols=84 Identities=15% Similarity=0.125 Sum_probs=53.4
Q ss_pred CCCCCeEEeecCCchhHHHHHHHHcCCCC--EEEEEeCCHH---HHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCC--C
Q 019692 135 PKPGWKVLDACSAPGNKTVHLAALMKGKG--KIVACELNKE---RVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPA--Y 207 (337)
Q Consensus 135 ~~~g~~VLDl~aG~G~kt~~la~~~~~~g--~V~avD~~~~---~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~--~ 207 (337)
..++.+||=.| |+|+.+.+++..+...| +|+.++.+.. .++.+.+.++..|. ++.++.+|..+...-... .
T Consensus 256 ~~~~~~vLITG-gtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~~~g~-~v~~~~~Dvtd~~~v~~~~~~ 333 (511)
T 2z5l_A 256 WQPSGTVLITG-GMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELRGHGC-EVVHAACDVAERDALAALVTA 333 (511)
T ss_dssp CCCCSEEEEET-TTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHHTTTC-EEEEEECCSSCHHHHHHHHHH
T ss_pred cCCCCEEEEEC-CCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHHhcCC-EEEEEEeCCCCHHHHHHHHhc
Confidence 35677888655 67888888887663333 6888888763 34555555655553 588899998764311000 0
Q ss_pred CCccEEEECCCCC
Q 019692 208 SEVRAILLDPSCS 220 (337)
Q Consensus 208 ~~fD~IlvDpPCS 220 (337)
..+|.||..+--.
T Consensus 334 ~~ld~VVh~AGv~ 346 (511)
T 2z5l_A 334 YPPNAVFHTAGIL 346 (511)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCcEEEECCccc
Confidence 3589999876533
No 476
>1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A*
Probab=70.28 E-value=7.6 Score=35.75 Aligned_cols=81 Identities=14% Similarity=0.083 Sum_probs=48.3
Q ss_pred CCeEEeecCCchhHHHHHHHHcC--CCCEEEEEeCCHHH---------HHHHHHHHHHhCC----Cc---EEEEeccCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMK--GKGKIVACELNKER---------VRRLKDTIKLSGA----AN---IEVLHGDFLN 199 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~--~~g~V~avD~~~~~---------l~~l~~~~~~~g~----~~---v~~~~~D~~~ 199 (337)
+++||=.| |+|+.+.+++..+. .+.+|++++.+... .+.+.+.++...- .+ +.++.+|..+
T Consensus 2 ~m~vlVTG-atG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d 80 (397)
T 1gy8_A 2 HMRVLVCG-GAGYIGSHFVRALLRDTNHSVVIVDSLVGTHGKSDHVETRENVARKLQQSDGPKPPWADRYAALEVGDVRN 80 (397)
T ss_dssp CCEEEEET-TTSHHHHHHHHHHHHHCCCEEEEEECCTTTTTCCTTSCCHHHHHHHHHHSCSSCCTTTTCCCEEEESCTTC
T ss_pred CCEEEEEC-CCCHHHHHHHHHHHHhCCCEEEEEecCCcccccccccchHHHHHHHHHHhhccccccCCceEEEEECCCCC
Confidence 34677444 67888888877653 44689999986543 3444433444321 24 7888999876
Q ss_pred CCCCC---CCCCCccEEEECCCC
Q 019692 200 LDPKD---PAYSEVRAILLDPSC 219 (337)
Q Consensus 200 ~~~~~---~~~~~fD~IlvDpPC 219 (337)
...-. ..++.+|.|+..+..
T Consensus 81 ~~~~~~~~~~~~~~d~vih~A~~ 103 (397)
T 1gy8_A 81 EDFLNGVFTRHGPIDAVVHMCAF 103 (397)
T ss_dssp HHHHHHHHHHSCCCCEEEECCCC
T ss_pred HHHHHHHHHhcCCCCEEEECCCc
Confidence 43110 001238999986653
No 477
>3czc_A RMPB; alpha/beta sandwich, phosphotransferase system, transferase, transport; 2.02A {Streptococcus mutans}
Probab=70.22 E-value=2.3 Score=32.48 Aligned_cols=72 Identities=13% Similarity=0.124 Sum_probs=36.7
Q ss_pred hHHHHHHhCCCCCCeEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC
Q 019692 126 SSMVAAALAPKPGWKVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP 205 (337)
Q Consensus 126 s~l~~~~l~~~~g~~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~ 205 (337)
|+.....+....-.+|| +.||+|.-|..++.. .+++.++..|++.+.+...+..++...
T Consensus 6 ~~~~~~~~~~~~~~kIl-vvC~sG~gTS~m~~~------------------kl~~~~~~~gi~~~~i~~~~~~~~~~~-- 64 (110)
T 3czc_A 6 SMTGGQQMGRGSMVKVL-TACGNGMGSSMVIKM------------------KVENALRQLGVSDIESASCSVGEAKGL-- 64 (110)
T ss_dssp ------------CEEEE-EECCCCHHHHHHHHH------------------HHHHHHHHTTCCCEEEEEECHHHHHHH--
T ss_pred hccccccccccCCcEEE-EECCCcHHHHHHHHH------------------HHHHHHHHcCCCeEEEEEeeHHHHhhc--
Confidence 34334444444334677 888889766665442 356667777775344555444443321
Q ss_pred CCCCccEEEECCCC
Q 019692 206 AYSEVRAILLDPSC 219 (337)
Q Consensus 206 ~~~~fD~IlvDpPC 219 (337)
...+|+|++-|+-
T Consensus 65 -~~~~DlIi~t~~l 77 (110)
T 3czc_A 65 -ASNYDIVVASNHL 77 (110)
T ss_dssp -GGGCSEEEEETTT
T ss_pred -cCCCcEEEECCch
Confidence 1358999988873
No 478
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=70.17 E-value=7.6 Score=35.28 Aligned_cols=51 Identities=31% Similarity=0.311 Sum_probs=36.8
Q ss_pred hCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..+++|++||-.|+ |.|..+.+++... ..+|++++.++++++.+++ ++|..
T Consensus 151 ~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~--G~~V~~~~~~~~~~~~~~~---~~g~~ 203 (345)
T 2j3h_A 151 CSPKEGETVYVSAASGAVGQLVGQLAKMM--GCYVVGSAGSKEKVDLLKT---KFGFD 203 (345)
T ss_dssp SCCCTTCEEEESSTTSHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHHH---TSCCS
T ss_pred hCCCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHHH---HcCCc
Confidence 46789999999987 3455566666654 3589999999988876653 34654
No 479
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=70.00 E-value=8.9 Score=34.65 Aligned_cols=50 Identities=28% Similarity=0.265 Sum_probs=35.1
Q ss_pred hCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..+++|++||-.|+ |.|..+.+++... ..+|+++|.++++++.+ +++|..
T Consensus 141 ~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~--G~~V~~~~~~~~~~~~~----~~~g~~ 192 (333)
T 1v3u_A 141 CGVKGGETVLVSAAAGAVGSVVGQIAKLK--GCKVVGAAGSDEKIAYL----KQIGFD 192 (333)
T ss_dssp SCCCSSCEEEEESTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHH----HHTTCS
T ss_pred hCCCCCCEEEEecCCCcHHHHHHHHHHHC--CCEEEEEeCCHHHHHHH----HhcCCc
Confidence 46789999999997 3444455555543 35899999999888766 345654
No 480
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=69.66 E-value=46 Score=29.02 Aligned_cols=77 Identities=12% Similarity=0.151 Sum_probs=50.7
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
|.+||=.|+ +|+.+.+++..+ ..+.+|+.+|.+...++.+.+. .+ ..+.++..|..+..... ..++.
T Consensus 27 ~k~vlVTGa-s~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (277)
T 4dqx_A 27 QRVCIVTGG-GSGIGRATAELFAKNGAYVVVADVNEDAAVRVANE---IG-SKAFGVRVDVSSAKDAESMVEKTTAKWGR 101 (277)
T ss_dssp TCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHH---HC-TTEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEECC-CcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHH---hC-CceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 667776665 566777777655 3346899999998877665544 34 34888888987643110 11246
Q ss_pred ccEEEECCCC
Q 019692 210 VRAILLDPSC 219 (337)
Q Consensus 210 fD~IlvDpPC 219 (337)
+|.++..+--
T Consensus 102 iD~lv~nAg~ 111 (277)
T 4dqx_A 102 VDVLVNNAGF 111 (277)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 8999987653
No 481
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=69.00 E-value=16 Score=31.53 Aligned_cols=81 Identities=15% Similarity=0.086 Sum_probs=57.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.+||=.|++ |+.+.+++..+ ..+.+|+.++.+...++.+.+.++..| .++.++..|..+..... .. +
T Consensus 6 ~~k~vlVTGas-~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~-g 82 (252)
T 3h7a_A 6 RNATVAVIGAG-DYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAG-GRIVARSLDARNEDEVTAFLNAADAH-A 82 (252)
T ss_dssp CSCEEEEECCS-SHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcC-CeEEEEECcCCCHHHHHHHHHHHHhh-C
Confidence 35677766655 56777777655 334689999999999999888888776 36889999987643110 01 3
Q ss_pred CccEEEECCCCC
Q 019692 209 EVRAILLDPSCS 220 (337)
Q Consensus 209 ~fD~IlvDpPCS 220 (337)
.+|.++.++-..
T Consensus 83 ~id~lv~nAg~~ 94 (252)
T 3h7a_A 83 PLEVTIFNVGAN 94 (252)
T ss_dssp CEEEEEECCCCC
T ss_pred CceEEEECCCcC
Confidence 689999877543
No 482
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=68.69 E-value=22 Score=30.70 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=57.5
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.++.+...++.+.+.+...| .++.++..|..+..... ..++
T Consensus 28 ~~k~vlITG-as~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~v~~~~~~~~~~~g 105 (262)
T 3rkr_A 28 SGQVAVVTG-ASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAG-GEAESHACDLSHSDAIAAFATGVLAAHG 105 (262)
T ss_dssp TTCEEEESS-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTT-CEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhC-CceeEEEecCCCHHHHHHHHHHHHHhcC
Confidence 466777666 5567787777755 334689999999999999888888776 35888999987643110 0124
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.++..+-.
T Consensus 106 ~id~lv~~Ag~ 116 (262)
T 3rkr_A 106 RCDVLVNNAGV 116 (262)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999987653
No 483
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=68.54 E-value=8.3 Score=33.54 Aligned_cols=80 Identities=11% Similarity=0.098 Sum_probs=52.7
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAY 207 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~av-D~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~ 207 (337)
.|.++|=.|+ +|+.+.+++..+. .+.+|+.+ +.+....+.+.+.++..|. ++.++..|..+..... ..+
T Consensus 7 ~~k~vlVTGa-s~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 7 TNRTIVVAGA-GRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGR-SALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTS-CCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCC-ceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 3667776665 4557777776542 34578877 7788888877777776663 4778889987643110 112
Q ss_pred CCccEEEECCC
Q 019692 208 SEVRAILLDPS 218 (337)
Q Consensus 208 ~~fD~IlvDpP 218 (337)
+.+|.++..+-
T Consensus 85 g~id~lv~nAg 95 (259)
T 3edm_A 85 GEIHGLVHVAG 95 (259)
T ss_dssp CSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 46899998764
No 484
>1tvm_A PTS system, galactitol-specific IIB component; phosphotransferase system (PTS), P-loop; NMR {Escherichia coli}
Probab=68.47 E-value=12 Score=28.50 Aligned_cols=58 Identities=14% Similarity=0.217 Sum_probs=37.2
Q ss_pred eEEeecCCchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCCC
Q 019692 140 KVLDACSAPGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPSC 219 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpPC 219 (337)
+|| +.||+|.-|..|.. ..+++.++..|+. +.+...+..++... ...+|+|+.-+|-
T Consensus 23 kIl-vvC~sG~gTS~ll~------------------~kl~~~~~~~gi~-~~V~~~~~~~~~~~---~~~~DlIist~~l 79 (113)
T 1tvm_A 23 KII-VACGGAVATSTMAA------------------EEIKELCQSHNIP-VELIQCRVNEIETY---MDGVHLICTTARV 79 (113)
T ss_dssp EEE-EESCSCSSHHHHHH------------------HHHHHHHHHTTCC-EEEEEECTTTTTTS---TTSCSEEEESSCC
T ss_pred EEE-EECCCCHHHHHHHH------------------HHHHHHHHHcCCe-EEEEEecHHHHhhc---cCCCCEEEECCcc
Confidence 444 56777765655432 2356677778876 55666666666432 2468999999885
Q ss_pred C
Q 019692 220 S 220 (337)
Q Consensus 220 S 220 (337)
.
T Consensus 80 ~ 80 (113)
T 1tvm_A 80 D 80 (113)
T ss_dssp C
T ss_pred c
Confidence 4
No 485
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=68.32 E-value=12 Score=33.10 Aligned_cols=77 Identities=10% Similarity=0.147 Sum_probs=50.6
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.+|.+...++.+.+.+ + .++.++..|..+..... ..++
T Consensus 28 ~gk~vlVTG-as~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 28 AGKVAIVTG-AGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKI---G-CGAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp TTCEEEETT-TTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHH---C-SSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEEC-CCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc---C-CcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 366777555 4566777777654 33469999999988877665544 4 34778888887643110 1124
Q ss_pred CccEEEECCC
Q 019692 209 EVRAILLDPS 218 (337)
Q Consensus 209 ~fD~IlvDpP 218 (337)
.+|.++..+-
T Consensus 103 ~iD~lvnnAg 112 (277)
T 3gvc_A 103 GVDKLVANAG 112 (277)
T ss_dssp SCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6899998764
No 486
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=68.24 E-value=4.7 Score=36.79 Aligned_cols=47 Identities=21% Similarity=0.250 Sum_probs=34.7
Q ss_pred HhCCCCCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHH
Q 019692 132 ALAPKPGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKD 180 (337)
Q Consensus 132 ~l~~~~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~ 180 (337)
...+ +|++||-.|+|+ |..+.++|+.+ +..+|+++|.++++++.+++
T Consensus 160 ~~~~-~g~~VlV~GaG~vG~~~~q~a~~~-Ga~~Vi~~~~~~~~~~~~~~ 207 (343)
T 2dq4_A 160 GSGV-SGKSVLITGAGPIGLMAAMVVRAS-GAGPILVSDPNPYRLAFARP 207 (343)
T ss_dssp TTCC-TTSCEEEECCSHHHHHHHHHHHHT-TCCSEEEECSCHHHHGGGTT
T ss_pred hCCC-CCCEEEEECCCHHHHHHHHHHHHc-CCCEEEEECCCHHHHHHHHH
Confidence 4567 899999999854 45566677765 22389999999988876654
No 487
>3qha_A Putative oxidoreductase; seattle structural genomics center for infectious disease, S mycobacterium avium 104, rossmann fold; 2.25A {Mycobacterium avium}
Probab=68.15 E-value=12 Score=33.34 Aligned_cols=103 Identities=12% Similarity=0.160 Sum_probs=60.6
Q ss_pred CeEEeecCCchhHHHHHHHHcCCC-CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECC
Q 019692 139 WKVLDACSAPGNKTVHLAALMKGK-GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDP 217 (337)
Q Consensus 139 ~~VLDl~aG~G~kt~~la~~~~~~-g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDp 217 (337)
.+|-=+|+| ..+..++..+... ..|+++|.+++.++.+.+ .|+ .+ ..|..+. .. .|+|++-.
T Consensus 16 ~~I~vIG~G--~mG~~~A~~l~~~G~~V~~~dr~~~~~~~~~~----~g~---~~-~~~~~~~------~~-aDvvi~~v 78 (296)
T 3qha_A 16 LKLGYIGLG--NMGAPMATRMTEWPGGVTVYDIRIEAMTPLAE----AGA---TL-ADSVADV------AA-ADLIHITV 78 (296)
T ss_dssp CCEEEECCS--TTHHHHHHHHTTSTTCEEEECSSTTTSHHHHH----TTC---EE-CSSHHHH------TT-SSEEEECC
T ss_pred CeEEEECcC--HHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHH----CCC---EE-cCCHHHH------Hh-CCEEEEEC
Confidence 356666655 4455555554333 489999999988776654 242 22 1222221 13 68999865
Q ss_pred CCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHHHHHHHHHHHHhCCCCCcEEEEEcCCCCcccCHHHHHHH
Q 019692 218 SCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLSAFQKKALRHALSFPGVERVVYSTCSIHQVENEDVIKSV 292 (337)
Q Consensus 218 PCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~~~Q~~lL~~A~~~~~~G~lvYsTCS~~~~ENe~vv~~~ 292 (337)
| ++..+ +.+++.....+++|.+|..++|..+...+.+.+.+
T Consensus 79 p---------------------------~~~~~-------~~v~~~l~~~l~~g~ivv~~st~~~~~~~~~~~~~ 119 (296)
T 3qha_A 79 L---------------------------DDAQV-------REVVGELAGHAKPGTVIAIHSTISDTTAVELARDL 119 (296)
T ss_dssp S---------------------------SHHHH-------HHHHHHHHTTCCTTCEEEECSCCCHHHHHHHHHHH
T ss_pred C---------------------------ChHHH-------HHHHHHHHHhcCCCCEEEEeCCCCHHHHHHHHHHH
Confidence 5 12222 23345555666678888888888887766666554
No 488
>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}
Probab=67.83 E-value=4.3 Score=38.38 Aligned_cols=77 Identities=17% Similarity=0.150 Sum_probs=49.7
Q ss_pred eEEeecCCchhHHHHHHHHcCCCC----EEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCC--CccEE
Q 019692 140 KVLDACSAPGNKTVHLAALMKGKG----KIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYS--EVRAI 213 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~~~g----~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~--~fD~I 213 (337)
+|+=+|| |+.+..++..+...+ .|+..|.+.++++.+.+.+...+-.++..+..|+.+...-..... ++|+|
T Consensus 3 kVlIiGa--GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvV 80 (405)
T 4ina_A 3 KVLQIGA--GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIV 80 (405)
T ss_dssp EEEEECC--SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEE
Confidence 5777777 577777777653333 899999999998888777665432347777888765321100011 37888
Q ss_pred EECCC
Q 019692 214 LLDPS 218 (337)
Q Consensus 214 lvDpP 218 (337)
+.-+|
T Consensus 81 in~ag 85 (405)
T 4ina_A 81 LNIAL 85 (405)
T ss_dssp EECSC
T ss_pred EECCC
Confidence 87655
No 489
>3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A
Probab=67.75 E-value=6.7 Score=34.04 Aligned_cols=82 Identities=7% Similarity=0.049 Sum_probs=50.3
Q ss_pred CCCeEEeecCCc-hhHHHHHHHHcC-CCCEEEEEeCCHHHH-HHHHHHH-HHhCCCcEEEEeccCCCCCCC-------CC
Q 019692 137 PGWKVLDACSAP-GNKTVHLAALMK-GKGKIVACELNKERV-RRLKDTI-KLSGAANIEVLHGDFLNLDPK-------DP 205 (337)
Q Consensus 137 ~g~~VLDl~aG~-G~kt~~la~~~~-~~g~V~avD~~~~~l-~~l~~~~-~~~g~~~v~~~~~D~~~~~~~-------~~ 205 (337)
.|.+||=.|++. |+.+.+++..+. .+.+|+.++.+.... +...+.+ +..+ .++.++..|..+.... ..
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~Dl~~~~~v~~~~~~~~~ 97 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYG-IKAKAYKCQVDSYESCEKLVKDVVA 97 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHC-CCEECCBCCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcC-CceeEEecCCCCHHHHHHHHHHHHH
Confidence 367888777653 678887777653 345888888764433 3333333 3445 3588888888764311 01
Q ss_pred CCCCccEEEECCCC
Q 019692 206 AYSEVRAILLDPSC 219 (337)
Q Consensus 206 ~~~~fD~IlvDpPC 219 (337)
.++.+|.++..+--
T Consensus 98 ~~g~id~li~nAg~ 111 (267)
T 3gdg_A 98 DFGQIDAFIANAGA 111 (267)
T ss_dssp HTSCCSEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 13568999987753
No 490
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=67.71 E-value=16 Score=31.60 Aligned_cols=78 Identities=12% Similarity=0.107 Sum_probs=50.1
Q ss_pred CCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCCC
Q 019692 138 GWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYSE 209 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~~ 209 (337)
|.+||=.| |+|+.+.+++..+ ..+.+|+.++.+++.++.+.+.+. ..+.++..|..+...-. ..++.
T Consensus 7 ~k~vlVTG-as~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~----~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 81 (260)
T 1nff_A 7 GKVALVSG-GARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELA----DAARYVHLDVTQPAQWKAAVDTAVTAFGG 81 (260)
T ss_dssp TCEEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTG----GGEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCEEEEeC-CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhh----cCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56777665 5566777777655 334689999999887766554432 24788888887643110 01236
Q ss_pred ccEEEECCCCC
Q 019692 210 VRAILLDPSCS 220 (337)
Q Consensus 210 fD~IlvDpPCS 220 (337)
+|.++..+...
T Consensus 82 iD~lv~~Ag~~ 92 (260)
T 1nff_A 82 LHVLVNNAGIL 92 (260)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999877533
No 491
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=67.66 E-value=9.6 Score=34.49 Aligned_cols=50 Identities=22% Similarity=0.150 Sum_probs=36.2
Q ss_pred hCCCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCC
Q 019692 133 LAPKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAA 188 (337)
Q Consensus 133 l~~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~ 188 (337)
..+++|++||-.|+ |.|..+.++++.. +.+|++++.++++++.++ ++|..
T Consensus 144 ~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~ 195 (334)
T 3qwb_A 144 YHVKKGDYVLLFAAAGGVGLILNQLLKMK--GAHTIAVASTDEKLKIAK----EYGAE 195 (334)
T ss_dssp SCCCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSHHHHHHHH----HTTCS
T ss_pred ccCCCCCEEEEECCCCHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----HcCCc
Confidence 36789999998884 3444566666664 358999999999887654 46754
No 492
>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...
Probab=67.38 E-value=2.4 Score=37.21 Aligned_cols=78 Identities=17% Similarity=0.242 Sum_probs=49.6
Q ss_pred CCCeEEeecC-CchhHHHHHHHHcC-CCCEEEEEeCCHHH-HHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CC
Q 019692 137 PGWKVLDACS-APGNKTVHLAALMK-GKGKIVACELNKER-VRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PA 206 (337)
Q Consensus 137 ~g~~VLDl~a-G~G~kt~~la~~~~-~~g~V~avD~~~~~-l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~ 206 (337)
.|.+||=.|+ |+|+.+.+++..+. ...+|+.++.+... ++.+.+ ..+ .++.++..|..+..... ..
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~---~~~-~~~~~~~~Dv~~~~~v~~~~~~~~~~ 81 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITD---RLP-AKAPLLELDVQNEEHLASLAGRVTEA 81 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHT---TSS-SCCCEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHH---hcC-CCceEEEccCCCHHHHHHHHHHHHHH
Confidence 3678888888 48888888887653 34689999998654 333322 223 24677888887643110 01
Q ss_pred CC---CccEEEECCC
Q 019692 207 YS---EVRAILLDPS 218 (337)
Q Consensus 207 ~~---~fD~IlvDpP 218 (337)
++ .+|.++..+-
T Consensus 82 ~g~~~~iD~lv~nAg 96 (269)
T 2h7i_A 82 IGAGNKLDGVVHSIG 96 (269)
T ss_dssp HCTTCCEEEEEECCC
T ss_pred hCCCCCceEEEECCc
Confidence 23 7899998764
No 493
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=67.19 E-value=9.8 Score=32.60 Aligned_cols=124 Identities=10% Similarity=0.072 Sum_probs=70.9
Q ss_pred CCCeEEeecCCchhHHHHHHHHcC-CCCEEEEE-eCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC---------
Q 019692 137 PGWKVLDACSAPGNKTVHLAALMK-GKGKIVAC-ELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP--------- 205 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~~-~~g~V~av-D~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~--------- 205 (337)
.|.+||=.|+ +|+.+.+++..+. .+.+|+.+ ..+....+.+.+.++..+ .++.++..|..+......
T Consensus 6 ~~k~vlITGa-s~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (255)
T 3icc_A 6 KGKVALVTGA-SRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNG-GSAFSIGANLESLHGVEALYSSLDNEL 83 (255)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTT-CEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECC-CChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcC-CceEEEecCcCCHHHHHHHHHHHHHHh
Confidence 3667776665 4667777777653 33467664 667777777777777665 357888888876431100
Q ss_pred ----CCCCccEEEECCCCCCccccCcccCccCCCCCCCCCCCcccHHHHHHHH----HHHHHHHHHHhCCCCC-cEEEEE
Q 019692 206 ----AYSEVRAILLDPSCSGSGTAAERLDHLLPSHASGHTADPTEMERLNKLS----AFQKKALRHALSFPGV-ERVVYS 276 (337)
Q Consensus 206 ----~~~~fD~IlvDpPCSg~G~~~~~~d~~~~~~~~~~~~~~~~~~~~~~l~----~~Q~~lL~~A~~~~~~-G~lvYs 276 (337)
...++|.++..+--...+.+. ..+.+...+.- .-...+++.++..++. |.+|+.
T Consensus 84 ~~~~~~~~id~lv~nAg~~~~~~~~-----------------~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~i 146 (255)
T 3icc_A 84 QNRTGSTKFDILINNAGIGPGAFIE-----------------ETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINI 146 (255)
T ss_dssp HHHHSSSCEEEEEECCCCCCCBCGG-----------------GCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEE
T ss_pred cccccCCcccEEEECCCCCCCCChh-----------------hCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEe
Confidence 012489999876533222110 01344433322 2345566666665543 788886
Q ss_pred cCC
Q 019692 277 TCS 279 (337)
Q Consensus 277 TCS 279 (337)
+..
T Consensus 147 sS~ 149 (255)
T 3icc_A 147 SSA 149 (255)
T ss_dssp CCG
T ss_pred CCh
Confidence 543
No 494
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=67.14 E-value=12 Score=34.39 Aligned_cols=52 Identities=17% Similarity=0.156 Sum_probs=37.0
Q ss_pred hCCC-CCCeEEeecCCc-hhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 133 LAPK-PGWKVLDACSAP-GNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 133 l~~~-~g~~VLDl~aG~-G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
..++ +|++||-.|+|+ |..+.++|+.++ .+|+++|.++++++.+++ ++|.+.
T Consensus 175 ~~~~~~g~~VlV~GaG~vG~~a~qlak~~G--a~Vi~~~~~~~~~~~~~~---~lGa~~ 228 (357)
T 2cf5_A 175 FGLKQPGLRGGILGLGGVGHMGVKIAKAMG--HHVTVISSSNKKREEALQ---DLGADD 228 (357)
T ss_dssp TSTTSTTCEEEEECCSHHHHHHHHHHHHHT--CEEEEEESSTTHHHHHHT---TSCCSC
T ss_pred cCCCCCCCEEEEECCCHHHHHHHHHHHHCC--CeEEEEeCChHHHHHHHH---HcCCce
Confidence 3567 999999998754 445666777653 589999999888766542 467654
No 495
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=66.98 E-value=28 Score=30.06 Aligned_cols=79 Identities=14% Similarity=0.098 Sum_probs=56.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCC-------CCCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPK-------DPAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~-------~~~~~ 208 (337)
.|.++|=.|+ +|+.+.+++..+ ....+|+.++.+.+.++.+.+.+...|. ++.++..|..+.... ...++
T Consensus 10 ~~k~vlVTGa-s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 10 TDKVVVISGV-GPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGR-RALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTCEEEEESC-CTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTC-CEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred CCcEEEEECC-CcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCC-cEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 4667776665 455777776654 3346899999999999998888887763 588899998764311 01135
Q ss_pred CccEEEECC
Q 019692 209 EVRAILLDP 217 (337)
Q Consensus 209 ~fD~IlvDp 217 (337)
.+|.++..+
T Consensus 88 ~id~lv~nA 96 (264)
T 3ucx_A 88 RVDVVINNA 96 (264)
T ss_dssp CCSEEEECC
T ss_pred CCcEEEECC
Confidence 789999876
No 496
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=66.88 E-value=24 Score=30.95 Aligned_cols=78 Identities=12% Similarity=0.104 Sum_probs=52.1
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC---CCCCCccE
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD---PAYSEVRA 212 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~---~~~~~fD~ 212 (337)
.|.+||=.| |+|+.+.+++..+ ..+.+|+.++.+...++.+.+.+ + .++.++..|..+..... ...+.+|.
T Consensus 15 ~gk~vlVTG-as~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dl~d~~~v~~~~~~~~~iD~ 89 (291)
T 3rd5_A 15 AQRTVVITG-ANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTM---A-GQVEVRELDLQDLSSVRRFADGVSGADV 89 (291)
T ss_dssp TTCEEEEEC-CSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTS---S-SEEEEEECCTTCHHHHHHHHHTCCCEEE
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHh---c-CCeeEEEcCCCCHHHHHHHHHhcCCCCE
Confidence 466777666 4567787777765 33468999999988877655443 2 36889999987643110 11246899
Q ss_pred EEECCCC
Q 019692 213 ILLDPSC 219 (337)
Q Consensus 213 IlvDpPC 219 (337)
++..+--
T Consensus 90 lv~nAg~ 96 (291)
T 3rd5_A 90 LINNAGI 96 (291)
T ss_dssp EEECCCC
T ss_pred EEECCcC
Confidence 9987653
No 497
>3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A*
Probab=66.57 E-value=13 Score=32.69 Aligned_cols=69 Identities=10% Similarity=0.089 Sum_probs=43.5
Q ss_pred eEEeecCCchhHHHHHHHHcC-CCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCCCCCCccEEEECCC
Q 019692 140 KVLDACSAPGNKTVHLAALMK-GKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDPAYSEVRAILLDPS 218 (337)
Q Consensus 140 ~VLDl~aG~G~kt~~la~~~~-~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~fD~IlvDpP 218 (337)
+|| +.-|+|+.+.+++..+. .+.+|++++.+........ ..+++++.+|..+.. ....... |.|+.-+.
T Consensus 2 ~vl-VtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-------~~~~~~~~~Dl~d~~-~~~~~~~-d~vih~A~ 71 (312)
T 3ko8_A 2 RIV-VTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-------NPSAELHVRDLKDYS-WGAGIKG-DVVFHFAA 71 (312)
T ss_dssp EEE-EETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-------CTTSEEECCCTTSTT-TTTTCCC-SEEEECCS
T ss_pred EEE-EECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-------CCCceEEECccccHH-HHhhcCC-CEEEECCC
Confidence 455 34477888888887653 3358999998654322110 235788999988765 2222333 99998664
No 498
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=66.34 E-value=33 Score=29.34 Aligned_cols=78 Identities=13% Similarity=0.196 Sum_probs=51.3
Q ss_pred CCCeEEeecCCchhHHHHHHHHc-CCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCC-------CCCC
Q 019692 137 PGWKVLDACSAPGNKTVHLAALM-KGKGKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKD-------PAYS 208 (337)
Q Consensus 137 ~g~~VLDl~aG~G~kt~~la~~~-~~~g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~-------~~~~ 208 (337)
.|.++|=.|+ +|+.+.+++..+ ....+|+.+|.+.+.++.+.+.+ + .++.++..|..+..... ..++
T Consensus 5 ~gk~vlVTGa-s~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~---~-~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 5 AGKTALVTGA-AQGIGKAIAARLAADGATVIVSDINAEGAKAAAASI---G-KKARAIAADISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTCEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHH---C-TTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh---C-CceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 3667776664 566777777654 33468999999998877665544 4 35888888887643110 0124
Q ss_pred CccEEEECCCC
Q 019692 209 EVRAILLDPSC 219 (337)
Q Consensus 209 ~fD~IlvDpPC 219 (337)
.+|.++..+--
T Consensus 80 ~id~lv~nAg~ 90 (247)
T 3rwb_A 80 GIDILVNNASI 90 (247)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999987653
No 499
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=66.14 E-value=7.6 Score=34.61 Aligned_cols=49 Identities=29% Similarity=0.347 Sum_probs=36.9
Q ss_pred CCCCCeEEeecC--CchhHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHhCCCc
Q 019692 135 PKPGWKVLDACS--APGNKTVHLAALMKGKGKIVACELNKERVRRLKDTIKLSGAAN 189 (337)
Q Consensus 135 ~~~g~~VLDl~a--G~G~kt~~la~~~~~~g~V~avD~~~~~l~~l~~~~~~~g~~~ 189 (337)
+++|++||-.|+ |.|..+.+++... +.+|++++.++++++.++ ++|...
T Consensus 123 ~~~g~~vlV~Ga~G~vG~~~~~~a~~~--Ga~Vi~~~~~~~~~~~~~----~~ga~~ 173 (302)
T 1iz0_A 123 ARPGEKVLVQAAAGALGTAAVQVARAM--GLRVLAAASRPEKLALPL----ALGAEE 173 (302)
T ss_dssp CCTTCEEEESSTTBHHHHHHHHHHHHT--TCEEEEEESSGGGSHHHH----HTTCSE
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHHHC--CCEEEEEeCCHHHHHHHH----hcCCCE
Confidence 789999999997 3455667777765 258999999998887664 467653
No 500
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=66.01 E-value=12 Score=31.75 Aligned_cols=76 Identities=16% Similarity=0.113 Sum_probs=48.7
Q ss_pred CCeEEeecCCchhHHHHHHHHcCC-C--CEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeccCCCCCCCCC-------CC
Q 019692 138 GWKVLDACSAPGNKTVHLAALMKG-K--GKIVACELNKERVRRLKDTIKLSGAANIEVLHGDFLNLDPKDP-------AY 207 (337)
Q Consensus 138 g~~VLDl~aG~G~kt~~la~~~~~-~--g~V~avD~~~~~l~~l~~~~~~~g~~~v~~~~~D~~~~~~~~~-------~~ 207 (337)
+.+||=.| |+|+.+.+++..+.. . .+|++++.+...++.+++. .-.++.++..|..+...... .+
T Consensus 3 ~k~vlItG-asggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 77 (250)
T 1yo6_A 3 PGSVVVTG-ANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSI----KDSRVHVLPLTVTCDKSLDTFVSKVGEIV 77 (250)
T ss_dssp CSEEEESS-CSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTC----CCTTEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEec-CCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHHhc----cCCceEEEEeecCCHHHHHHHHHHHHHhc
Confidence 45677555 567888888876643 3 5899999998776654322 12358899999876431100 01
Q ss_pred C--CccEEEECCC
Q 019692 208 S--EVRAILLDPS 218 (337)
Q Consensus 208 ~--~fD~IlvDpP 218 (337)
+ .+|.|+..+-
T Consensus 78 g~~~id~li~~Ag 90 (250)
T 1yo6_A 78 GSDGLSLLINNAG 90 (250)
T ss_dssp GGGCCCEEEECCC
T ss_pred CCCCCcEEEECCc
Confidence 1 6899998764
Done!