BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019695
(337 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FF10|HPSE1_ARATH Heparanase-like protein 1 OS=Arabidopsis thaliana GN=At5g07830 PE=2
SV=1
Length = 543
Score = 470 bits (1210), Expect = e-132, Method: Compositional matrix adjust.
Identities = 215/342 (62%), Positives = 272/342 (79%), Gaps = 6/342 (1%)
Query: 1 MGIFLSLFIYLISYLPVI----LARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKC 56
MG + + + + L ++ +A+++ R +I + + V DE+F+CAT+DWWPHDKC
Sbjct: 1 MGFRVCVIVVFLGCLLLVPEKTMAQEMKRASIVIQGARRVCETDENFVCATLDWWPHDKC 60
Query: 57 NYNHCPWGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRK 116
NY+ CPWG SSVIN+DL+ PLL AI+AF+ LRIRIGGSLQDQV+YDVG+LK PC PF+K
Sbjct: 61 NYDQCPWGYSSVINMDLTRPLLTKAIKAFKPLRIRIGGSLQDQVIYDVGNLKTPCRPFQK 120
Query: 117 MKDGLFGFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNAR 176
M GLFGFSKGCLHM+RWDELN T A+V+FGLNAL GRH +R AWGGAWD N +
Sbjct: 121 MNSGLFGFSKGCLHMKRWDELNSFLTATGAVVTFGLNALRGRHKLRGKAWGGAWDHINTQ 180
Query: 177 DFLKYTISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNS-SSKP 235
DFL YT+S GY IDSWE+GNELSG + +GASV AELYGKDLI LK++IN++YKNS KP
Sbjct: 181 DFLNYTVSKGYVIDSWEFGNELSG-SGVGASVSAELYGKDLIVLKDVINKVYKNSWLHKP 239
Query: 236 TILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSET 295
++APGGF++Q+WY K L++SG +VV+ VTHHIYNLG G DP LV KI++P LS+VS+T
Sbjct: 240 ILVAPGGFYEQQWYTKLLEISGPSVVDVVTHHIYNLGSGNDPALVKKIMDPSYLSQVSKT 299
Query: 296 FGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW 337
F ++ QTI++HGPWAS WVGESGGAYNSGGRHVS+TF++SFW
Sbjct: 300 FKDVNQTIQEHGPWASPWVGESGGAYNSGGRHVSDTFIDSFW 341
>sp|Q8L608|HPSE2_ARATH Heparanase-like protein 2 OS=Arabidopsis thaliana GN=At5g61250 PE=2
SV=1
Length = 539
Score = 463 bits (1192), Expect = e-130, Method: Compositional matrix adjust.
Identities = 210/335 (62%), Positives = 268/335 (80%), Gaps = 4/335 (1%)
Query: 3 IFLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCP 62
+FLS + L PV ++ R T+ +D ++ +A DE+FICAT+DWWP +KCNY+ CP
Sbjct: 7 VFLSCLLLLP---PVTFGSNMERTTLVIDGSRRIAETDENFICATLDWWPPEKCNYDQCP 63
Query: 63 WGNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLF 122
WG +S+INL+L+ PLLA AIQAF++LRIRIGGSLQDQV+YDVGDLK PC F+K DGLF
Sbjct: 64 WGYASLINLNLASPLLAKAIQAFRTLRIRIGGSLQDQVIYDVGDLKTPCTQFKKTDDGLF 123
Query: 123 GFSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYT 182
GFS+GCL+M+RWDE+N FN T AIV+FGLNALHGR+ + AWGG WD N +DF+ YT
Sbjct: 124 GFSEGCLYMKRWDEVNHFFNATGAIVTFGLNALHGRNKLNGTAWGGDWDHTNTQDFMNYT 183
Query: 183 ISMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGG 242
+S GY IDSWE+GNELSG + I ASV ELYGKDLI LKN+I +YKNS +KP ++APGG
Sbjct: 184 VSKGYAIDSWEFGNELSG-SGIWASVSVELYGKDLIVLKNVIKNVYKNSRTKPLVVAPGG 242
Query: 243 FFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQT 302
FF+++WY++ L++SG V++ +THHIYNLGPG DP LV+KIL+P LS +SE F N+ QT
Sbjct: 243 FFEEQWYSELLRLSGPGVLDVLTHHIYNLGPGNDPKLVNKILDPNYLSGISELFANVNQT 302
Query: 303 IEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW 337
I++HGPWA+AWVGE+GGA+NSGGR VS TF+NSFW
Sbjct: 303 IQEHGPWAAAWVGEAGGAFNSGGRQVSETFINSFW 337
>sp|Q9FZP1|HPSE3_ARATH Heparanase-like protein 3 OS=Arabidopsis thaliana GN=At5g34940 PE=2
SV=2
Length = 536
Score = 333 bits (853), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 164/334 (49%), Positives = 218/334 (65%), Gaps = 3/334 (0%)
Query: 5 LSLFIYLISYLPVILARDVTRV-TIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPW 63
+ LF+ + +L ++ V T+FV V T DE FICAT+DWWP +KC+Y C W
Sbjct: 9 IVLFLCVFQFLDCTVSSAVEENGTVFVYGRAAVGTIDEDFICATLDWWPPEKCDYGSCSW 68
Query: 64 GNSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMKDGLFG 123
++S++NLDL++ +L NAI+AF L+IRIGG+LQD V+Y+ D K PC PF K LFG
Sbjct: 69 DHASILNLDLNNVILQNAIKAFAPLKIRIGGTLQDIVIYETPDSKQPCLPFTKNSSILFG 128
Query: 124 FSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTI 183
+++GCL M+RWDELN F +T V FGLNAL GR + GAW+ NA F+++T
Sbjct: 129 YTQGCLPMRRWDELNAFFRKTGTKVIFGLNALSGRSIKSNGEAIGAWNYTNAESFIRFTA 188
Query: 184 SMGYQIDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKNSSSKPTILAPGGF 243
Y ID WE GNEL G + +GA V A Y D INL+NI+N +YKN S P ++ PGGF
Sbjct: 189 ENNYTIDGWELGNELCG-SGVGARVGANQYAIDTINLRNIVNRVYKNVSPMPLVIGPGGF 247
Query: 244 FDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTI 303
F+ +W+ ++L N +N T HIY+LGPGVD +L+ KILNP L + +++F +LK I
Sbjct: 248 FEVDWFTEYLN-KAENSLNATTRHIYDLGPGVDEHLIEKILNPSYLDQEAKSFRSLKNII 306
Query: 304 EKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW 337
+ A AWVGESGGAYNSG VSN FV SFW
Sbjct: 307 KNSSTKAVAWVGESGGAYNSGRNLVSNAFVYSFW 340
>sp|Q9LRC8|BAGLU_SCUBA Baicalin-beta-D-glucuronidase OS=Scutellaria baicalensis GN=SGUS
PE=1 SV=1
Length = 527
Score = 233 bits (594), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 125/348 (35%), Positives = 195/348 (56%), Gaps = 22/348 (6%)
Query: 5 LSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPWG 64
L + + + ++ ++ + T V I VA DE+++CAT+D WP KCNY +CPWG
Sbjct: 10 LCVLCFSLIFICGVIGEETTIVKI---EENPVAQTDENYVCATLDLWPPTKCNYGNCPWG 66
Query: 65 NSSVINLDLSHPLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPC-HPFRKMKDGLFG 123
SS +NLDL++ ++ NA++ F L++R GG+LQD+++Y PC F + +
Sbjct: 67 KSSFLNLDLNNNIIRNAVKEFAPLKLRFGGTLQDRLVYQTSR-DEPCDSTFYNNTNLILD 125
Query: 124 FSKGCLHMQRWDELNQLFNRTRAIVSFGLNALHGRHN-----IRHNAW-------GGAWD 171
FS CL + RWDE+NQ T + FGLNAL G+ I+ + G WD
Sbjct: 126 FSHACLSLDRWDEINQFILETGSEAVFGLNALRGKTVEIKGIIKDGQYLGETTTAVGEWD 185
Query: 172 SNNARDFLKYTISMGYQ-IDSWEYGNELSGRTSIGASVDAELYGKDLINLKNIINELYKN 230
+N++ ++Y++ GY+ I W GNEL G T + V E Y D L ++ E+Y++
Sbjct: 186 YSNSKFLIEYSLKKGYKHIRGWTLGNELGGHT-LFIGVSPEDYANDAKKLHELVKEIYQD 244
Query: 231 SSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLS 290
+ P I+APG FD EWY +F+ + ++ THH+YNLG G D L +L
Sbjct: 245 QGTMPLIIAPGAIFDLEWYTEFIDRTPE--LHVATHHMYNLGSGGDDALKDVLLTASFFD 302
Query: 291 RVSET-FGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSFW 337
+++ + L++ + + G A AW+GE+GGA+NSG +SNTF+N FW
Sbjct: 303 EATKSMYEGLQKIVNRPGTKAVAWIGEAGGAFNSGQDGISNTFINGFW 350
>sp|Q90YK5|HPSE_CHICK Heparanase OS=Gallus gallus GN=HPSE PE=1 SV=1
Length = 523
Score = 77.4 bits (189), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 89/191 (46%), Gaps = 16/191 (8%)
Query: 150 FGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNEL-SGRTSIGASV 208
FGLNAL R ++ WDS+NA+ L Y Y I SWE GNE S R G +
Sbjct: 165 FGLNALLRRAGLQ-------WDSSNAKQLLGYCAQRSYNI-SWELGNEPNSFRKKSGICI 216
Query: 209 DAELYGKDLINLKNIINE--LYKNSSSKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVT- 265
D G+D ++L+ ++++ LY+++ + Q F++ SG ++ VT
Sbjct: 217 DGFQLGRDFVHLRQLLSQHPLYRHAELYGLDVGQPRKHTQHLLRSFMK-SGGKAIDSVTW 275
Query: 266 HHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGG 325
HH Y G L+P+ L + ++ +E P W+GE+G AY G
Sbjct: 276 HHYYVNGRSATRE---DFLSPEVLDSFATAIHDVLGIVEATVPGKKVWLGETGSAYGGGA 332
Query: 326 RHVSNTFVNSF 336
+SNT+V F
Sbjct: 333 PQLSNTYVAGF 343
>sp|Q9MYY0|HPSE_BOVIN Heparanase OS=Bos taurus GN=HPSE PE=2 SV=2
Length = 545
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 89/193 (46%), Gaps = 21/193 (10%)
Query: 150 FGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNEL-SGRTSIGASV 208
FG+NAL ++ WDS+NA+ L Y S Y I SWE GNE S + G +
Sbjct: 188 FGVNALLRTTDMH-------WDSSNAQLLLDYCSSKNYNI-SWELGNEPNSFQRKAGIFI 239
Query: 209 DAELYGKDLINLKNIINE-LYKNSS-SKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVT- 265
+ G+D I + ++ + +KN+ P I P + FL+ +G V++ VT
Sbjct: 240 NGRQLGEDFIEFRKLLGKSAFKNAKLYGPDIGQPRRN-TVKMLKSFLK-AGGEVIDSVTW 297
Query: 266 HHIYNLGPGVDPNLVSK--ILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNS 323
HH Y V+ + +K LNP L + + +EK P W+GE+ A+
Sbjct: 298 HHYY-----VNGRIATKEDFLNPDILDTFISSVQKTLRIVEKIRPLKKVWLGETSSAFGG 352
Query: 324 GGRHVSNTFVNSF 336
G +SNTF F
Sbjct: 353 GAPFLSNTFAAGF 365
>sp|Q9Y251|HPSE_HUMAN Heparanase OS=Homo sapiens GN=HPSE PE=1 SV=2
Length = 543
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 83/192 (43%), Gaps = 19/192 (9%)
Query: 150 FGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNEL-SGRTSIGASV 208
FGLNAL +++ W+S+NA+ L Y S GY I SWE GNE S +
Sbjct: 186 FGLNALLRTADLQ-------WNSSNAQLLLDYCSSKGYNI-SWELGNEPNSFLKKADIFI 237
Query: 209 DAELYGKDLINLKNIINELYKNSSSKPTILAPGGFFDQEWYAKFLQV---SGSNVVNGVT 265
+ G+D I L + L K++ + P + AK L+ +G V++ VT
Sbjct: 238 NGSQLGEDFIQLHKL---LRKSTFKNAKLYGPDVGQPRRKTAKMLKSFLKAGGEVIDSVT 294
Query: 266 -HHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSG 324
HH Y G LNP L + + Q +E P W+GE+ AY G
Sbjct: 295 WHHYYLNGRTATKE---DFLNPDVLDIFISSVQKVFQVVESTRPGKKVWLGETSSAYGGG 351
Query: 325 GRHVSNTFVNSF 336
+S+TF F
Sbjct: 352 APLLSDTFAAGF 363
>sp|Q71RP1|HPSE_RAT Heparanase OS=Rattus norvegicus GN=Hpse PE=2 SV=1
Length = 536
Score = 59.3 bits (142), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 135 DELNQLFNRTRAIVSFGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEY 194
D L +R + FGLNAL ++R W+S+NA+ L Y S GY I SWE
Sbjct: 164 DMLYSFAKCSRLDLIFGLNALLRTPDLR-------WNSSNAQLLLNYCSSKGYNI-SWEL 215
Query: 195 GNELSGR-TSIGASVDAELYGKDLINLKNIINE-LYKNSS-SKPTILAPGGFFDQEWYAK 251
GNE + S+D G+D + L ++ + ++N+ P I P G +
Sbjct: 216 GNEPNSFWKKAHISIDGLQLGEDFVELHKLLQKSAFQNAKLYGPDIGQPRGK-TVKLLRS 274
Query: 252 FLQVSGSNVVNGVTHHIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWAS 311
FL+ +G V++ +T H Y L V L+ L + + + ++ P
Sbjct: 275 FLK-AGGEVIDSLTWHHYYLNGRVATK--EDFLSSDVLDTFILSVQKILKVTKEMTPGKK 331
Query: 312 AWVGESGGAYNSGGRHVSNTFVNSF 336
W+GE+ AY G +S+TF F
Sbjct: 332 VWLGETSSAYGGGAPLLSDTFAAGF 356
>sp|Q6YGZ1|HPSE_MOUSE Heparanase OS=Mus musculus GN=Hpse PE=1 SV=3
Length = 535
Score = 55.8 bits (133), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 84/190 (44%), Gaps = 15/190 (7%)
Query: 150 FGLNALHGRHNIRHNAWGGAWDSNNARDFLKYTISMGYQIDSWEYGNELSGR-TSIGASV 208
FGLNAL ++R W+S+NA+ L Y S GY I SWE GNE + +
Sbjct: 178 FGLNALLRTPDLR-------WNSSNAQLLLDYCSSKGYNI-SWELGNEPNSFWKKAHILI 229
Query: 209 DAELYGKDLINLKNIINE-LYKNSS-SKPTILAPGGFFDQEWYAKFLQVSGSNVVNGVTH 266
D G+D + L ++ ++N+ P I P G + FL+ +G V++ +T
Sbjct: 230 DGLQLGEDFVELHKLLQRSAFQNAKLYGPDIGQPRGK-TVKLLRSFLK-AGGEVIDSLTW 287
Query: 267 HIYNLGPGVDPNLVSKILNPQRLSRVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGR 326
H Y L + L+ L + + + ++ P W+GE+ AY G
Sbjct: 288 HHYYLNGRIATK--EDFLSSDVLDTFILSVQKILKVTKEITPGKKVWLGETSSAYGGGAP 345
Query: 327 HVSNTFVNSF 336
+SNTF F
Sbjct: 346 LLSNTFAAGF 355
>sp|Q8WWQ2|HPSE2_HUMAN Inactive heparanase-2 OS=Homo sapiens GN=HPSE2 PE=1 SV=3
Length = 592
Score = 43.1 bits (100), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 180 KYTISMGYQIDSWEYGNELSG-RTSIGASVDAELYGKDLINLKNIINELYKNSSSK---P 235
KY+ S Y I SWE GNE + RT G +V+ GKD I LK+++ + S + P
Sbjct: 246 KYSASKKYNI-SWELGNEPNNYRTMHGRAVNGSQLGKDYIQLKSLLQPIRIYSRASLYGP 304
Query: 236 TILAPG----GFFDQEWYAKFLQVSGSNVVNGVT-HHIYNLGPGVDPNLVSKILNPQRLS 290
I P D F++V+GS V+ VT H Y G V V L + L
Sbjct: 305 NIGRPRKNVIALLD-----GFMKVAGS-TVDAVTWQHCYIDGRVVK---VMDFLKTRLLD 355
Query: 291 RVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSF 336
+S+ +++ + + P W+ G ++S+++ F
Sbjct: 356 TLSDQIRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGF 401
>sp|B2RY83|HPSE2_MOUSE Inactive heparanase-2 OS=Mus musculus GN=Hpse2 PE=2 SV=1
Length = 592
Score = 42.7 bits (99), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 73/166 (43%), Gaps = 19/166 (11%)
Query: 180 KYTISMGYQIDSWEYGNELSGRTSI-GASVDAELYGKDLINLKNIINELYKNSSSK---P 235
KY+ S Y I SWE GNE + SI G +V+ GKD I LK+++ + S + P
Sbjct: 246 KYSASKKYNI-SWELGNEPNNYRSIHGRAVNGSQLGKDYIQLKSLLQPIRVYSRASLYGP 304
Query: 236 TILAPG----GFFDQEWYAKFLQVSGSNVVNGVT-HHIYNLGPGVDPNLVSKILNPQRLS 290
I P D F++V+GS V+ VT H Y G V V L + L
Sbjct: 305 NIGRPRKNVIALLD-----GFMKVAGS-TVDAVTWQHCYIDGRVVK---VMDFLKTRLLD 355
Query: 291 RVSETFGNLKQTIEKHGPWASAWVGESGGAYNSGGRHVSNTFVNSF 336
+S+ +++ + + P W+ G ++S+++ F
Sbjct: 356 TLSDQIRKIQKVVNTYTPGKKIWLEGVVTTSAGGTNNLSDSYAAGF 401
>sp|C5CXH6|HISZ_VARPS ATP phosphoribosyltransferase regulatory subunit OS=Variovorax
paradoxus (strain S110) GN=hisZ PE=3 SV=1
Length = 386
Score = 37.4 bits (85), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/97 (23%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 63 WGNSSVINLDLSH----PLLANAIQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFRKMK 118
+G++SV++ P ++ A+ + L +G Q+ +D+ DL+ + + M+
Sbjct: 218 YGDASVLDEAAKALKGTPAVSAALAGLKQLAASLGADPARQISFDLADLRGYAY-YSGMR 276
Query: 119 DGLF--GFSKGCLHMQRWDELNQLFNRTRAIVSFGLN 153
G++ G + + R+DE+ +F R R V F L+
Sbjct: 277 FGIYVPGAADALVRGGRYDEVGAVFGRNRPAVGFSLD 313
>sp|P19263|MED14_YEAST Mediator of RNA polymerase II transcription subunit 14
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RGR1 PE=1 SV=2
Length = 1082
Score = 33.1 bits (74), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/145 (22%), Positives = 58/145 (40%), Gaps = 34/145 (23%)
Query: 4 FLSLFIYLISYLPVILARDVTRVTIFVDATKTVATNDEHFICATVDWWPHDKCNYNHCPW 63
FL L I+L + ++ + V T+T+ N+ H + ++W+ N N+C W
Sbjct: 130 FLQLIIFLRTQF--------LKLYVLVKWTRTIKQNNFHVLIDLLNWFRTTNMNVNNCIW 181
Query: 64 GNSSVINLDLSHPLLANA--IQAFQSLRIRIGGSLQDQVLYDVGDLKAPCHPFR------ 115
S +N +++ L N + A + L +G P H F+
Sbjct: 182 ALKSSLN-SMTNAKLPNVDLVTALEVL--------------SLGRPNLPTHNFKLSGVSN 226
Query: 116 --KMKDGLFGFSKGCLHMQRWDELN 138
M DG+ G + +QR +LN
Sbjct: 227 SMDMVDGMAKVPIGLI-LQRLKDLN 250
>sp|Q5UP56|YL594_MIMIV Uncharacterized protein L594 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L594 PE=4 SV=1
Length = 390
Score = 32.0 bits (71), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 33/117 (28%)
Query: 171 DSNNARDFLKYTISMGYQIDSWEYGNELSGRTSIGASV---------------DAELYGK 215
+++ DF + IDSW Y L G+ S +V D+ +Y
Sbjct: 222 ETDQVEDFFR-----EISIDSWYYIFRLPGKNSSKETVINNIINYLRKNRIKFDSYIYD- 275
Query: 216 DLINLKNIINELYKNSSSKPTI------LAPGGFFDQEWYAKFLQVSGSNVVNGVTH 266
+N ++ IN+L KN SKPTI L G + D K++ + + NG TH
Sbjct: 276 --MNYRSNINDLIKNKPSKPTIIFIKEKLRLGEYLD----TKYIYLVHDDPDNGHTH 326
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.442
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 130,431,296
Number of Sequences: 539616
Number of extensions: 5479977
Number of successful extensions: 12539
Number of sequences better than 100.0: 21
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 12513
Number of HSP's gapped (non-prelim): 23
length of query: 337
length of database: 191,569,459
effective HSP length: 118
effective length of query: 219
effective length of database: 127,894,771
effective search space: 28008954849
effective search space used: 28008954849
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)