Query 019701
Match_columns 337
No_of_seqs 121 out of 143
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 05:50:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019701.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/019701hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2hd9a1 b.122.1.8 (A:1-145) Hy 98.4 2.6E-07 1.9E-11 76.5 8.5 118 207-330 4-142 (145)
2 d2evea1 b.122.1.8 (A:2-149) Hy 91.6 0.21 1.5E-05 41.4 7.1 98 232-331 34-147 (148)
3 d2ar1a1 b.122.1.8 (A:7-163) Hy 80.2 1.2 8.7E-05 36.7 5.5 101 232-335 39-155 (157)
4 d1zcea1 b.122.1.8 (A:2-147) Hy 75.2 2 0.00014 35.0 5.3 91 232-331 37-135 (146)
5 d2gbsa1 b.122.1.8 (A:2-137) Hy 43.1 16 0.0012 29.0 5.1 90 232-331 36-133 (136)
6 d1nmla2 a.3.1.5 (A:167-326) Di 22.8 29 0.0021 27.4 3.3 31 303-333 101-131 (160)
7 d1nxza1 b.122.1.2 (A:2-73) Hyp 22.2 27 0.002 23.7 2.7 34 230-263 25-58 (72)
8 d1vhka1 b.122.1.2 (A:2-73) Hyp 21.9 30 0.0022 23.6 2.9 47 217-263 10-59 (72)
9 d1xjva2 b.40.4.3 (A:149-299) P 15.1 80 0.0059 25.2 4.4 23 229-251 76-98 (151)
10 d2g50a1 b.58.1.1 (A:116-217) P 13.0 67 0.0049 23.0 3.1 31 229-262 43-73 (102)
No 1
>d2hd9a1 b.122.1.8 (A:1-145) Hypothetical protein PH1033 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.44 E-value=2.6e-07 Score=76.49 Aligned_cols=118 Identities=19% Similarity=0.385 Sum_probs=89.4
Q ss_pred EEEeecCcChHHhhhhhhccCCccchhhhhccCCCCcEEEEeccCc---------eEeeeeeeccCCCCccCCcCccCCC
Q 019701 207 YIFVCNNDTMAENLKRQLFGLPPRYRDSVRAITPGLPLFLYNYSTH---------QLHGIFEAASFGGTNIDPTAWEDKK 277 (337)
Q Consensus 207 ~IFmCN~~T~~ECf~r~LFGLP~~h~d~VrkIKPGmpLFLYnys~R---------kLhGIFEAaS~Gg~NIdP~AF~s~~ 277 (337)
.|++++.+..+.+.++.++|++.+++..+++|+||+.|+.|.-... ..+||+|++|+-.- .+...|.+..
T Consensus 4 Wi~v~s~e~~~~~~~~g~~~~~~~k~~~~~rikpGD~li~Y~~~~~~~~~~~~~q~f~ai~~V~~~~~~-d~t~i~~~~~ 82 (145)
T d2hd9a1 4 WICITNRENWEVIKRHNVWGVPKKHKNTLSRVKPGDKLVIYVRQEKDKEGNLLEPKIVGIYEVTSEPYV-DFSRIFKPHR 82 (145)
T ss_dssp EEEEECHHHHHHHHHHCEEEECGGGHHHHTTCCTTCEEEEEECCEECTTCCEECCEEEEEEEECSCCEE-CCCCCSCCTT
T ss_pred EEEeCCHHHHHHHHhCCEEeccCCchhhHhhCCCCCEEEEEeCccccCCCcccccEEEEEEEEecccee-cccccccccc
Confidence 4777888889999999999999999999999999999999987643 59999999987663 4444576543
Q ss_pred CCCCCcCCceEEEEEeeeccCCCcccchhhhh--ccCC-------CCccc---cCCHHHHHHHHH
Q 019701 278 CPGESRFPAQVRVVTRKICEPLEEDSFRPILH--HYDG-------PKFRL---ELNVPEAISLLD 330 (337)
Q Consensus 278 ~~g~s~FPAQVRf~i~k~C~PL~EseFKpiI~--~Y~~-------~KF~f---ELs~~QV~~Ll~ 330 (337)
++...||.+|++..... .|..++|+++ .|.. ..+++ +|+.....-+.+
T Consensus 83 -~~~~~~P~R~~v~~~~~----~ev~i~~l~~~L~fi~~k~~W~~y~~r~g~~~I~~~D~~lI~~ 142 (145)
T d2hd9a1 83 -GGKETYPYRVKIKPIKI----GEINFKPLINDLKFIKNKKRWSMHFFGKAMRELPEEDYKLIEK 142 (145)
T ss_dssp -SSCCCCCEEEEEEEEEE----EEEESGGGGGGCTTCCCSTTGGGGTTTCSEEEECHHHHHHHHH
T ss_pred -cCCceEEEEEEeEEeec----ccccHHHHHhHHHhhcCchhhhHHHhcCCceecCHHHHHHHHH
Confidence 46788999999998754 4688899885 3332 22333 677766554443
No 2
>d2evea1 b.122.1.8 (A:2-149) Hypothetical protein PSPTO5229 {Pseudomonas syringae [TaxId: 317]}
Probab=91.64 E-value=0.21 Score=41.36 Aligned_cols=98 Identities=18% Similarity=0.267 Sum_probs=66.2
Q ss_pred hhhhhccCCCCcEEEEecc--CceEeeeeeeccCCCCccCCcCccCCCC------CCCCcCCceEEEEEeeecc-CCCcc
Q 019701 232 RDSVRAITPGLPLFLYNYS--THQLHGIFEAASFGGTNIDPTAWEDKKC------PGESRFPAQVRVVTRKICE-PLEED 302 (337)
Q Consensus 232 ~d~VrkIKPGmpLFLYnys--~RkLhGIFEAaS~Gg~NIdP~AF~s~~~------~g~s~FPAQVRf~i~k~C~-PL~Es 302 (337)
+.+++..+.|+..|+|.-. ...++||-|.++.+. .||.||..... ..+.+--.-|.++....+. ||+-+
T Consensus 34 rn~lr~M~~GD~~~fYHS~~~~~~IvGia~V~~~ay--pDpt~~d~~s~y~D~ks~~e~prw~~Vdv~~~~~~~~~vtL~ 111 (148)
T d2evea1 34 RNFLRTMAEGDEFFFYHSSCPEPGIAGIGKIVKTAY--PDPTALDPDSHYHDAKATTEKNPWSALDIGFVDIFKNVLGLG 111 (148)
T ss_dssp HHHHHHCCTTCEEEEEECSSSSCEEEEEEEEEEEEE--ECGGGGCTTSTTCCTTCCSSCCCCEEEEEEEEEEEEEEEEHH
T ss_pred HHHHHhcccCCEEEEEecCCCCCceEEEEEEEEecc--ccCccccCCCceeccccccCCCCeeEEEEEeccccCCcccHH
Confidence 5688999999999999875 578999999999876 78888875321 1233334567777665554 55544
Q ss_pred cch--hhhhcc----CCCCcc-ccCCHHHHHHHHHh
Q 019701 303 SFR--PILHHY----DGPKFR-LELNVPEAISLLDI 331 (337)
Q Consensus 303 eFK--piI~~Y----~~~KF~-fELs~~QV~~Ll~L 331 (337)
+.| +.++.. .++.-. ..+|.+|-..+++|
T Consensus 112 elK~~~~l~~m~Lv~kgsRLSV~PVt~~ew~~I~~L 147 (148)
T d2evea1 112 YLKQQSQLEQLPLVQKGSRLSVMPVTAEQWAAILAL 147 (148)
T ss_dssp HHHTCGGGTTCGGGSTTCCCSEEEECHHHHHHHHHH
T ss_pred HHhcCcccccCceeccCCccCeeecCHHHHHHHHcC
Confidence 444 345432 123333 48899998888776
No 3
>d2ar1a1 b.122.1.8 (A:7-163) Hypothetical protein LmjF36.6870 {Leishmania major [TaxId: 5664]}
Probab=80.24 E-value=1.2 Score=36.69 Aligned_cols=101 Identities=21% Similarity=0.258 Sum_probs=61.7
Q ss_pred hhhhhccCCCCcEEEEeccCc--eEeeeeeeccCCCCccCCcCccCCC-----CCCCCc---CCceEEEEEeeeccCCCc
Q 019701 232 RDSVRAITPGLPLFLYNYSTH--QLHGIFEAASFGGTNIDPTAWEDKK-----CPGESR---FPAQVRVVTRKICEPLEE 301 (337)
Q Consensus 232 ~d~VrkIKPGmpLFLYnys~R--kLhGIFEAaS~Gg~NIdP~AF~s~~-----~~g~s~---FPAQVRf~i~k~C~PL~E 301 (337)
+.+++.+++|+.+|+|.-..+ -+.||-+.++.+. ++|.+|.... .+.... +=+.|++..... .|++-
T Consensus 39 rn~lr~Mk~GD~~~fYHS~~~~~~i~g~~~v~~~~~--pd~t~~d~~s~y~Dpks~~~~p~w~~VdV~~v~~~~-~pVtL 115 (157)
T d2ar1a1 39 RNNMRAMSVGDKVLFYHSNTKEPGVAGLAEVVRLAY--DDFTALDKTSEYFDPKATKEKNPWKMVDVKFVARWD-TVLTL 115 (157)
T ss_dssp HHHHHHCCTTCEEEEEECSSSSCEEEEEEEEEEEEE--ECGGGGCTTSTTCCTTCCSSCCCCEEEEEEEEEEEE-EEEEH
T ss_pred HHHHHhCcCCCEEEEEEcCCCCCceEEEEEEecccc--CCcccccCCccccCcccccCCCceEEEEEEEeeecC-CccCH
Confidence 568899999999999998755 5888888887665 7777775421 111111 122344443322 55554
Q ss_pred ccch--hhhhcc---CCCCc-cccCCHHHHHHHHHhhhhc
Q 019701 302 DSFR--PILHHY---DGPKF-RLELNVPEAISLLDIFEEQ 335 (337)
Q Consensus 302 seFK--piI~~Y---~~~KF-~fELs~~QV~~Ll~LF~~~ 335 (337)
++.| +.++.. ..+.- -..+|.+|-..+++|=..+
T Consensus 116 ~eLK~~~~L~~m~Llr~~RLSV~PVt~~ew~~I~~L~~~~ 155 (157)
T d2ar1a1 116 HELKSRRELQKMALFTQRRLSVQPVSASEYAYILRMNEEQ 155 (157)
T ss_dssp HHHTTCGGGTTCHHHHCSSCSEEEECHHHHHHHHHHHHHH
T ss_pred HHHhcCcccccCcEeecCccceeecCHHHHHHHHHHhccc
Confidence 4444 334321 12333 3489999999888875443
No 4
>d1zcea1 b.122.1.8 (A:2-147) Hypothetical protein Atu2648 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=75.25 E-value=2 Score=34.97 Aligned_cols=91 Identities=20% Similarity=0.295 Sum_probs=55.2
Q ss_pred hhhhhccCCCCcEEEEeccCc-eEeeeeeeccCCCCccCCcCccCCCCCCCCcCCceEEEEEeeec-cCCCcccch--hh
Q 019701 232 RDSVRAITPGLPLFLYNYSTH-QLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTRKIC-EPLEEDSFR--PI 307 (337)
Q Consensus 232 ~d~VrkIKPGmpLFLYnys~R-kLhGIFEAaS~Gg~NIdP~AF~s~~~~g~s~FPAQVRf~i~k~C-~PL~EseFK--pi 307 (337)
+.+++..|+|+.+|+|.-... .++|+++.+++.. .+|.+...+ ++ .-|.|+.+..+ .||+-++.| +.
T Consensus 37 rn~lr~Mk~GD~~ffYHS~~~~~ivg~~~v~~~~y--~d~t~~~~p------rW-~~VdV~~v~~~~~~VsL~eLK~~~~ 107 (146)
T d1zcea1 37 RNNMRAMKIGDKGFFYHSNEGLDVVGIVEVCALSH--PDSTAEGDL------KW-DCVDIRAVCDMPQPVSLKDVKANPK 107 (146)
T ss_dssp HHHHHTCCTTCEEEEEETTTTCEEEEEEEEEEEEE--ECTTSTTCS------SC-EEEEEEEEEEEEEEEEHHHHHHCGG
T ss_pred HHHHHhccCCCEEEEEecCCCCCceEEEeeccccC--CCcCcCCCC------Ce-EEEEEEeecccCceeeHHHhhcCcc
Confidence 568999999999999998865 7889998888654 233333222 12 33444444332 234433334 23
Q ss_pred hhc---cCCCCcc-ccCCHHHHHHHHHh
Q 019701 308 LHH---YDGPKFR-LELNVPEAISLLDI 331 (337)
Q Consensus 308 I~~---Y~~~KF~-fELs~~QV~~Ll~L 331 (337)
++. -.++.-. ..+|..|-..+++|
T Consensus 108 L~~m~Lvk~~RLSV~PVt~~ew~~I~~L 135 (146)
T d1zcea1 108 LEKMSLVTSMRLSVQPVTEEEYLEVCRM 135 (146)
T ss_dssp GTTCHHHHCSSCSEEEECHHHHHHHHHH
T ss_pred hhhCcchhcCccCeEecCHHHHHHHHHh
Confidence 332 1234333 38888888888876
No 5
>d2gbsa1 b.122.1.8 (A:2-137) Hypothetical protein RPA0253 {Rhodopseudomonas palustris [TaxId: 1076]}
Probab=43.06 E-value=16 Score=28.96 Aligned_cols=90 Identities=19% Similarity=0.179 Sum_probs=52.2
Q ss_pred hhhhhccCCCCcEEEEeccCc-eEeeeeeeccCCCCccCCcCccCCCCCCCCcCCceEEEEEe---eeccCCCcccchhh
Q 019701 232 RDSVRAITPGLPLFLYNYSTH-QLHGIFEAASFGGTNIDPTAWEDKKCPGESRFPAQVRVVTR---KICEPLEEDSFRPI 307 (337)
Q Consensus 232 ~d~VrkIKPGmpLFLYnys~R-kLhGIFEAaS~Gg~NIdP~AF~s~~~~g~s~FPAQVRf~i~---k~C~PL~EseFKpi 307 (337)
+.+++..++|+..|+|.-... -+.|+-+.++.+. .+|+++.. ++ .-|.++.. +.+-+|.|-.-.+.
T Consensus 36 rn~mr~M~~GD~~~fYHS~~~~~ivg~~~v~~~~~--pd~t~~~p-------~w-~~Vdvk~~~~~~~~V~L~~lK~~~~ 105 (136)
T d2gbsa1 36 KLHMVAMRRGDRAFYYHSNEGKEIVGIAEIIREAY--PDPTDASG-------KF-VCVDIKADKPLKTPVTLAAVKAEPR 105 (136)
T ss_dssp HHHHHHCCTTCEEEEEETTTTCEEEEEEEEEEEEE--ECTTCTTS-------CS-EEEEEEEEEEEEEEEEHHHHHHCTT
T ss_pred HHHHHHhccCCEEEEEecCCCCCcEEEEeeeeccc--CCcccccc-------Cc-eeeecccCCccCcceeHHHHhcccc
Confidence 568899999999999997643 5778888877553 45555432 12 13444433 33444443322233
Q ss_pred hhc---cCCCCcc-ccCCHHHHHHHHHh
Q 019701 308 LHH---YDGPKFR-LELNVPEAISLLDI 331 (337)
Q Consensus 308 I~~---Y~~~KF~-fELs~~QV~~Ll~L 331 (337)
++. -.++.-. ..+|..|-..+++|
T Consensus 106 L~~m~Llk~~RLSV~PVt~~ew~~I~~L 133 (136)
T d2gbsa1 106 LADMALMKYSRLSVQPVTAEEWKLVCKM 133 (136)
T ss_dssp GGGSHHHHCTTCSSEEECHHHHHHHHHH
T ss_pred cccCchhhcCCceeeeCCHHHHHHHHHh
Confidence 321 1233333 37788888777765
No 6
>d1nmla2 a.3.1.5 (A:167-326) Di-heme cytochrome c peroxidase {Pseudomonas nautica [TaxId: 2743]}
Probab=22.80 E-value=29 Score=27.37 Aligned_cols=31 Identities=19% Similarity=0.253 Sum_probs=25.7
Q ss_pred cchhhhhccCCCCccccCCHHHHHHHHHhhh
Q 019701 303 SFRPILHHYDGPKFRLELNVPEAISLLDIFE 333 (337)
Q Consensus 303 eFKpiI~~Y~~~KF~fELs~~QV~~Ll~LF~ 333 (337)
.++.+|++|.......+||.+|+..|++-..
T Consensus 101 tL~evi~~~~~~~~~~~Lt~~e~~~LvaFL~ 131 (160)
T d1nmla2 101 SLEEAVAVMGTAQLGTELNNDEVKSIVAFLK 131 (160)
T ss_dssp CHHHHHHHTCCTTTTCCCCHHHHHHHHHHHG
T ss_pred CHHHHHHHHhhhccccCCCHHHHHHHHHHHH
Confidence 3567888898878888999999999998654
No 7
>d1nxza1 b.122.1.2 (A:2-73) Hypothetical protein HI0303 {Haemophilus influenzae [TaxId: 727]}
Probab=22.20 E-value=27 Score=23.72 Aligned_cols=34 Identities=21% Similarity=0.128 Sum_probs=26.5
Q ss_pred cchhhhhccCCCCcEEEEeccCceEeeeeeeccC
Q 019701 230 RYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASF 263 (337)
Q Consensus 230 ~h~d~VrkIKPGmpLFLYnys~RkLhGIFEAaS~ 263 (337)
.|..-|-++++|+.+.|||=+.+.-.+.-...+.
T Consensus 25 hHl~~VLR~k~Gd~v~l~dg~g~~~~~~I~~i~k 58 (72)
T d1nxza1 25 NHVARVLRMTEGEQLELFDGSNHIYPAKIIESNK 58 (72)
T ss_dssp HHHHTTSCCCTTCEEEEECSSSEEEEEEEEEEET
T ss_pred HHHHheeCCCCCCEEEEEeCCCCEEEEEEEEEeC
Confidence 4556799999999999999777777776655553
No 8
>d1vhka1 b.122.1.2 (A:2-73) Hypothetical protein YqeU {Bacillus subtilis [TaxId: 1423]}
Probab=21.89 E-value=30 Score=23.65 Aligned_cols=47 Identities=9% Similarity=0.031 Sum_probs=33.0
Q ss_pred HHhhhhhhccCC---ccchhhhhccCCCCcEEEEeccCceEeeeeeeccC
Q 019701 217 AENLKRQLFGLP---PRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAASF 263 (337)
Q Consensus 217 ~ECf~r~LFGLP---~~h~d~VrkIKPGmpLFLYnys~RkLhGIFEAaS~ 263 (337)
++......+=|+ ..|.--|-++|+|+.+.|+|=.-+...+...+.+.
T Consensus 10 ~~~~~~~~i~l~~~~~hHl~~VLR~k~Gd~i~l~dg~g~~~~~~I~~i~k 59 (72)
T d1vhka1 10 QQIEEAPTFSITGEEVHHIVNVMRMNEGDQIICCSQDGFEAKCELQSVSK 59 (72)
T ss_dssp HHHHSSSSEEEESHHHHHHHTTTCCCTTCEEEEECTTSCEEEEEEEEECS
T ss_pred hhcccCCEEEECHHHHHHHHheeccCCCCEEEEEECCCCEEEEEEEEEEC
Confidence 344444445444 34555699999999999999888777777766654
No 9
>d1xjva2 b.40.4.3 (A:149-299) Protection of telomeres protein 1, Pot1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=15.12 E-value=80 Score=25.16 Aligned_cols=23 Identities=22% Similarity=0.249 Sum_probs=20.1
Q ss_pred ccchhhhhccCCCCcEEEEeccC
Q 019701 229 PRYRDSVRAITPGLPLFLYNYST 251 (337)
Q Consensus 229 ~~h~d~VrkIKPGmpLFLYnys~ 251 (337)
..|..+++.+|||+.|.|+|.-.
T Consensus 76 D~H~~~ar~lK~GdfV~l~NVh~ 98 (151)
T d1xjva2 76 DNHVHVARSLKVGSFLRIYSLHT 98 (151)
T ss_dssp TTHHHHHHHCCTTCEEEEEEEEE
T ss_pred CchHHHHhhCCCCCEEEEEEEEE
Confidence 37888999999999999999655
No 10
>d2g50a1 b.58.1.1 (A:116-217) Pyruvate kinase (PK) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}
Probab=13.02 E-value=67 Score=22.96 Aligned_cols=31 Identities=6% Similarity=0.216 Sum_probs=24.1
Q ss_pred ccchhhhhccCCCCcEEEEeccCceEeeeeeecc
Q 019701 229 PRYRDSVRAITPGLPLFLYNYSTHQLHGIFEAAS 262 (337)
Q Consensus 229 ~~h~d~VrkIKPGmpLFLYnys~RkLhGIFEAaS 262 (337)
-.|..+.+.|+||+.++| ++++|.-.-+.++
T Consensus 43 v~~~~l~~~v~~G~~Ili---DDG~i~l~V~~v~ 73 (102)
T d2g50a1 43 LDYKNICKVVDVGSKVYV---DDGLISLQVKQKG 73 (102)
T ss_dssp BSCTTHHHHCCTTCEEEE---TTTTEEEEEEEEE
T ss_pred cchHHHHHhcCCCCEEEE---cCCEEEEEEEeCC
Confidence 346678999999999998 7788876655554
Done!