BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019702
(337 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255557835|ref|XP_002519947.1| Stage III sporulation protein AA, putative [Ricinus communis]
gi|223540993|gb|EEF42551.1| Stage III sporulation protein AA, putative [Ricinus communis]
Length = 412
Score = 579 bits (1492), Expect = e-163, Method: Compositional matrix adjust.
Identities = 279/327 (85%), Positives = 304/327 (92%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
F ILP DL D L NDS R QLLEVILDLGRLPEARYLGEFGG+YLR+TEV++EELE+AQ
Sbjct: 82 FLDILPPDLHDILLNDSNRAQLLEVILDLGRLPEARYLGEFGGRYLRNTEVTMEELEFAQ 141
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+AVGEFGGDNRAGIEGTLHRISAIRSRKG IVGLTCRVGRAVSGH+DMV+DLLHYGKSIL
Sbjct: 142 NAVGEFGGDNRAGIEGTLHRISAIRSRKGLIVGLTCRVGRAVSGHVDMVHDLLHYGKSIL 201
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
FVGRPGVGKTTVMREIARVLSD+ KRVV+VDTSNEIGGDGDIPH+A+G ARRMQVP+PS
Sbjct: 202 FVGRPGVGKTTVMREIARVLSDKLDKRVVVVDTSNEIGGDGDIPHAAVGGARRMQVPDPS 261
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQHKVMIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAHGE LENIIKNP L
Sbjct: 262 LQHKVMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKNPTL 321
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLL 306
S+LIGG++TV LGDEEARARR QKSILERK PPTFYFLIEMRERH+WVTH TEKSVDMLL
Sbjct: 322 SNLIGGIETVILGDEEARARRSQKSILERKGPPTFYFLIEMRERHHWVTHLTEKSVDMLL 381
Query: 307 RGKTPLVEIRKRDDRFNVVVDRWKTYD 333
RG+ P VE+R+R+D+F VV++RWK YD
Sbjct: 382 RGENPSVEVRRRNDQFKVVIERWKAYD 408
>gi|15217492|ref|NP_174599.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
gi|12322578|gb|AAG51292.1|AC027035_15 unknown protein [Arabidopsis thaliana]
gi|48596989|gb|AAT46035.1| At1g33290 [Arabidopsis thaliana]
gi|50198961|gb|AAT70483.1| At1g33290 [Arabidopsis thaliana]
gi|332193460|gb|AEE31581.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
Length = 379
Score = 575 bits (1483), Expect = e-162, Method: Compositional matrix adjust.
Identities = 279/336 (83%), Positives = 307/336 (91%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEE 61
+ GAF +ILP DLR RL NDS+R QL+EVI+DLGR PEARYLGE GG+YLR+ EVS+EE
Sbjct: 44 DNLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPPEARYLGEPGGQYLRNNEVSMEE 103
Query: 62 LEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY 121
LE AQ VGEFG DNRAGIEGTLHRISAIR+RKG IVGLTCRVGRAVSGHIDM+YDLLHY
Sbjct: 104 LEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHY 163
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GKSILFVGRPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDGDIPHSAIG +RRMQ
Sbjct: 164 GKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSAIGGSRRMQ 223
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
VP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVMLIGTAHGE L+NII
Sbjct: 224 VPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVMLIGTAHGEQLQNII 283
Query: 242 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKS 301
KNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW+ H+TEKS
Sbjct: 284 KNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKS 343
Query: 302 VDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
VDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 344 VDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|297846316|ref|XP_002891039.1| hypothetical protein ARALYDRAFT_473506 [Arabidopsis lyrata subsp.
lyrata]
gi|297336881|gb|EFH67298.1| hypothetical protein ARALYDRAFT_473506 [Arabidopsis lyrata subsp.
lyrata]
Length = 379
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/336 (82%), Positives = 306/336 (91%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEE 61
+ AF +ILP DLR RL NDS+R QL+EVI+DLGR PEARYLGE GG+YLR+ EVS+EE
Sbjct: 44 DNLAAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPPEARYLGEPGGQYLRNNEVSMEE 103
Query: 62 LEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY 121
LE AQ VGEFG DNRAGIEGTLHRISAIR+RKG IVGLTCRVGRAVSGHIDM+YDLLHY
Sbjct: 104 LEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHY 163
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GKSILFVGRPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDGDIPHSAIG +RRMQ
Sbjct: 164 GKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSAIGGSRRMQ 223
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
VP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVMLIGTAHGE L+NII
Sbjct: 224 VPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVMLIGTAHGEQLQNII 283
Query: 242 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKS 301
KNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW+ H+TEKS
Sbjct: 284 KNPTLSDLIGGIETVTLGDEEARARRTQKSILERKAPPTFYFLIEMRERDYWIAHQTEKS 343
Query: 302 VDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
VDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 344 VDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|222423588|dbj|BAH19763.1| AT1G33290 [Arabidopsis thaliana]
Length = 379
Score = 573 bits (1476), Expect = e-161, Method: Compositional matrix adjust.
Identities = 278/336 (82%), Positives = 306/336 (91%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEE 61
+ GAF +ILP DLR RL NDS+R QL+EVI+DLGR PEARYLGE GG+YLR+ EVS+EE
Sbjct: 44 DNLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPPEARYLGEPGGQYLRNNEVSMEE 103
Query: 62 LEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY 121
LE AQ VGEFG DNRAGIEGTLHRISAIR+RKG IVGLTCRVGRAVSGHIDM+YDLLHY
Sbjct: 104 LEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHY 163
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GKSILFVGRPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEI GDGDIPHSAIG +RRMQ
Sbjct: 164 GKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIEGDGDIPHSAIGGSRRMQ 223
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
VP+PSLQHKVMIEAVENHMP+VIIVDEIGTEAEA ACRSIAERGVMLIGTAHGE L+NII
Sbjct: 224 VPKPSLQHKVMIEAVENHMPQVIIVDEIGTEAEALACRSIAERGVMLIGTAHGEQLQNII 283
Query: 242 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKS 301
KNP LSDLIGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW+ H+TEKS
Sbjct: 284 KNPTLSDLIGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKS 343
Query: 302 VDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
VDMLLRG+ P+VE+R+RD+ + VV++RWK YD I
Sbjct: 344 VDMLLRGRNPMVEVRRRDEEYKVVIERWKAYDGQGI 379
>gi|357160507|ref|XP_003578787.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 388
Score = 561 bits (1446), Expect = e-157, Method: Compositional matrix adjust.
Identities = 272/330 (82%), Positives = 300/330 (90%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
QILP+DLRD L+N+ +R QLLEVILDLGR PEAR+LG GG+YLR +E+S ELE
Sbjct: 55 LAELLQILPTDLRDNLKNEPRRDQLLEVILDLGRRPEARFLGNSGGQYLRDSEISQLELE 114
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
AQ AVGEFGGDNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +
Sbjct: 115 EAQKAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVNGHVDMVRDLLNYKE 174
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQVP
Sbjct: 175 SILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVP 234
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
EPS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKN
Sbjct: 235 EPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIKN 294
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 303
P+LSDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVD
Sbjct: 295 PVLSDLIGGVETVTLGDEEARARRTQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVD 354
Query: 304 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 333
MLL GK PLVE+RKRD+ F V+++RW TYD
Sbjct: 355 MLLHGKKPLVEVRKRDNEFQVIIERWATYD 384
>gi|77553351|gb|ABA96147.1| expressed protein [Oryza sativa Japonica Group]
Length = 395
Score = 560 bits (1444), Expect = e-157, Method: Compositional matrix adjust.
Identities = 270/327 (82%), Positives = 300/327 (91%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
Q+LP DLRD LQN+ ++ QLLEVILDLGR PEAR+LG+ GG+YLR +E+S +ELE AQ
Sbjct: 65 LLQVLPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQQELEEAQ 124
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
AVGEFGGDNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +SIL
Sbjct: 125 RAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESIL 184
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
F+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQV +PS
Sbjct: 185 FLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPS 244
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKNP L
Sbjct: 245 MQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTL 304
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLL 306
SDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDMLL
Sbjct: 305 SDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLL 364
Query: 307 RGKTPLVEIRKRDDRFNVVVDRWKTYD 333
GK PLVE+RKRD++F VV++RW TYD
Sbjct: 365 HGKKPLVEVRKRDNKFQVVIERWATYD 391
>gi|359493523|ref|XP_002264380.2| PREDICTED: uncharacterized protein ycf45-like [Vitis vinifera]
gi|147770825|emb|CAN76429.1| hypothetical protein VITISV_023566 [Vitis vinifera]
Length = 351
Score = 559 bits (1441), Expect = e-157, Method: Compositional matrix adjust.
Identities = 275/334 (82%), Positives = 304/334 (91%), Gaps = 1/334 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F AF +ILP DLR+ L N+ KR QLLEVILDLGRLPEARYLG+ GGKYLR T+VS+EELE
Sbjct: 19 FHAFLEILPCDLRNNLLNEPKRAQLLEVILDLGRLPEARYLGDCGGKYLRDTQVSMEELE 78
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
YAQ+AVGEFGGDNRAGIEGTLHRISAIRSR G IVGLTCRVGRAVSGH+DM+ DLL +G+
Sbjct: 79 YAQNAVGEFGGDNRAGIEGTLHRISAIRSRNGVIVGLTCRVGRAVSGHVDMIRDLLPFGE 138
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SILFVGRPGVGKTTVMREIARVLSDE +RVVIVDTSNEIGGDGDIPH+AIG ARRMQVP
Sbjct: 139 SILFVGRPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAAIGGARRMQVP 198
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
EPS+QH++MIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAHGE LENIIKN
Sbjct: 199 EPSMQHRIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKN 258
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 303
P LSDL+GG++TVTLGD EARARRCQKSILERKA PTF FLIEMRERHYWVTH T++SVD
Sbjct: 259 PTLSDLVGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRERHYWVTHWTQRSVD 318
Query: 304 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
MLL GK PLVE+R+R+D+F VV++R TYD +I
Sbjct: 319 MLLHGKRPLVEVRRRNDQFEVVIERG-TYDGSEI 351
>gi|297734733|emb|CBI16967.3| unnamed protein product [Vitis vinifera]
Length = 388
Score = 558 bits (1437), Expect = e-156, Method: Compositional matrix adjust.
Identities = 275/334 (82%), Positives = 304/334 (91%), Gaps = 1/334 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F AF +ILP DLR+ L N+ KR QLLEVILDLGRLPEARYLG+ GGKYLR T+VS+EELE
Sbjct: 56 FHAFLEILPCDLRNNLLNEPKRAQLLEVILDLGRLPEARYLGDCGGKYLRDTQVSMEELE 115
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
YAQ+AVGEFGGDNRAGIEGTLHRISAIRSR G IVGLTCRVGRAVSGH+DM+ DLL +G+
Sbjct: 116 YAQNAVGEFGGDNRAGIEGTLHRISAIRSRNGVIVGLTCRVGRAVSGHVDMIRDLLPFGE 175
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SILFVGRPGVGKTTVMREIARVLSDE +RVVIVDTSNEIGGDGDIPH+AIG ARRMQVP
Sbjct: 176 SILFVGRPGVGKTTVMREIARVLSDELNRRVVIVDTSNEIGGDGDIPHAAIGGARRMQVP 235
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
EPS+QH++MIEAVENHMPEVIIVDEIGTEAEA ACRSIAERG+MLIGTAHGE LENIIKN
Sbjct: 236 EPSMQHRIMIEAVENHMPEVIIVDEIGTEAEALACRSIAERGIMLIGTAHGERLENIIKN 295
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 303
P LSDL+GG++TVTLGD EARARRCQKSILERKA PTF FLIEMRERHYWVTH T++SVD
Sbjct: 296 PTLSDLVGGIETVTLGDAEARARRCQKSILERKALPTFPFLIEMRERHYWVTHWTQRSVD 355
Query: 304 MLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
MLL GK PLVE+R+R+D+F VV++R TYD +I
Sbjct: 356 MLLHGKRPLVEVRRRNDQFEVVIER-GTYDGSEI 388
>gi|226531438|ref|NP_001144701.1| uncharacterized protein LOC100277737 [Zea mays]
gi|195645988|gb|ACG42462.1| hypothetical protein [Zea mays]
gi|414865048|tpg|DAA43605.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 390
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 271/327 (82%), Positives = 299/327 (91%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
QILP DLRD LQN+ ++ QLLEVILDLGR PEAR+LG+ GG+YLR +E+S +ELE AQ
Sbjct: 60 LLQILPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQKELEDAQ 119
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
AVGEFGGDNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +SIL
Sbjct: 120 KAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESIL 179
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
F+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGD+PH+AIG ARRMQVPEPS
Sbjct: 180 FLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDVPHAAIGGARRMQVPEPS 239
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKNP L
Sbjct: 240 MQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIKNPTL 299
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLL 306
SDLIGGV+TVTLGD+EARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDMLL
Sbjct: 300 SDLIGGVETVTLGDDEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLL 359
Query: 307 RGKTPLVEIRKRDDRFNVVVDRWKTYD 333
GK PLVE+RKRD F VV++RW TYD
Sbjct: 360 HGKKPLVEVRKRDSEFQVVIERWATYD 386
>gi|326506502|dbj|BAJ86569.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 387
Score = 557 bits (1435), Expect = e-156, Method: Compositional matrix adjust.
Identities = 270/327 (82%), Positives = 297/327 (90%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
QILP DLRD LQN+ +R QLLEVILDLGR PEAR+LG GG+YLR E+S ELE AQ
Sbjct: 57 LLQILPKDLRDNLQNEPRRDQLLEVILDLGRQPEARFLGNSGGQYLRDNEISQLELEEAQ 116
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
AVGEFG DNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +SIL
Sbjct: 117 RAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTCRVGRAVNGHVDMVRDLLNYKESIL 176
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
F+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQVPEPS
Sbjct: 177 FLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPS 236
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QH+VMIEAVENHMPEV+IVDEIGTE+EA ACRSIAERGVMLIGTAHGE L NIIKNP+L
Sbjct: 237 MQHRVMIEAVENHMPEVVIVDEIGTESEAQACRSIAERGVMLIGTAHGERLANIIKNPVL 296
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLL 306
SDL+GGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDMLL
Sbjct: 297 SDLVGGVETVTLGDEEARARRTQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLL 356
Query: 307 RGKTPLVEIRKRDDRFNVVVDRWKTYD 333
GK PLVE+RKRD+ F V+++RW TYD
Sbjct: 357 HGKKPLVEVRKRDNEFQVIIERWATYD 383
>gi|218186582|gb|EEC69009.1| hypothetical protein OsI_37798 [Oryza sativa Indica Group]
Length = 484
Score = 554 bits (1428), Expect = e-155, Method: Compositional matrix adjust.
Identities = 268/323 (82%), Positives = 298/323 (92%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
Q+LP DLRD LQN+ ++ QLLEVILDLGR PEAR+LG+ GG+YLR +E+S +ELE AQ A
Sbjct: 79 QVLPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQQELEEAQRA 138
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VGEFGGDNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +SILF+
Sbjct: 139 VGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESILFL 198
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQV +PS+Q
Sbjct: 199 GRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPSMQ 258
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
H+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKNP LSD
Sbjct: 259 HRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTLSD 318
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 308
LIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDMLL G
Sbjct: 319 LIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLLHG 378
Query: 309 KTPLVEIRKRDDRFNVVVDRWKT 331
K PLVE+RKRD++F VV++RW T
Sbjct: 379 KKPLVEVRKRDNKFQVVIERWAT 401
>gi|356576569|ref|XP_003556403.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 393
Score = 548 bits (1413), Expect = e-154, Method: Compositional matrix adjust.
Identities = 266/332 (80%), Positives = 295/332 (88%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
A QILPSDL L N R QLLEVILDLGR PEARYLG+ GG LR+TEV+V+ELEYA
Sbjct: 62 ALLQILPSDLHHNLLNQPNRPQLLEVILDLGRFPEARYLGKHGGHSLRNTEVTVKELEYA 121
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
+ AVGEFG DNRAGIEGTLHRISAIRSR G IVGLTCRVGRAV+G IDMVYDLL YGKSI
Sbjct: 122 EQAVGEFGKDNRAGIEGTLHRISAIRSRNGHIVGLTCRVGRAVTGQIDMVYDLLQYGKSI 181
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
LFVGRPGVGKTTVMREIARVLSDE KRVVIVDTSNEIGGDG+IPH+AIG ARRMQVPEP
Sbjct: 182 LFVGRPGVGKTTVMREIARVLSDELHKRVVIVDTSNEIGGDGNIPHAAIGGARRMQVPEP 241
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
S+QH+VMIEAVENHMPEVI+VDEIGTEAEAHACRSIAERG+MLIGTAHG+ LENIIKNP
Sbjct: 242 SMQHRVMIEAVENHMPEVIVVDEIGTEAEAHACRSIAERGIMLIGTAHGQQLENIIKNPT 301
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDML 305
LSDLIGG+++VTLGD EARAR QK+ILERKAPPTF FLIEMR+RHYW+TH+T+KSVDML
Sbjct: 302 LSDLIGGIESVTLGDAEARARNSQKTILERKAPPTFDFLIEMRDRHYWLTHQTDKSVDML 361
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
LRG +P VE+RKRD++ VV+++ K YD+ I
Sbjct: 362 LRGISPQVEVRKRDEKCKVVIEKSKAYDKCQI 393
>gi|357504105|ref|XP_003622341.1| F-box protein [Medicago truncatula]
gi|355497356|gb|AES78559.1| F-box protein [Medicago truncatula]
Length = 663
Score = 547 bits (1410), Expect = e-153, Method: Compositional matrix adjust.
Identities = 263/329 (79%), Positives = 296/329 (89%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
A QILPSDL L N R QLLEVILDLGR PEARYLG+ G YLR++EV+V ELEYA
Sbjct: 332 ALLQILPSDLHHNLLNQPNRPQLLEVILDLGRFPEARYLGKNGNHYLRNSEVTVRELEYA 391
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
+ AVG FG DNRAGIEGTLHRISAIRSR G IVGLTCR+GRAV+GHIDMVYDLLHYGKSI
Sbjct: 392 EGAVGNFGKDNRAGIEGTLHRISAIRSRNGGIVGLTCRIGRAVTGHIDMVYDLLHYGKSI 451
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
LF+GRPGVGKTTVMREIARVLSDEF KRVVIVDTSNEIGGDG+IPH+AIG ARRMQV EP
Sbjct: 452 LFLGRPGVGKTTVMREIARVLSDEFHKRVVIVDTSNEIGGDGNIPHAAIGGARRMQVSEP 511
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
S+QH VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG+MLIGTAHG+ +EN++KNP
Sbjct: 512 SMQHSVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGIMLIGTAHGQQIENVMKNPT 571
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDML 305
LSDLIGG+++VTLGD EARAR+CQK+ILERKAPPTF FLIEMR+RHYW+TH+T+KSVD+L
Sbjct: 572 LSDLIGGIESVTLGDYEARARKCQKTILERKAPPTFDFLIEMRDRHYWITHQTDKSVDIL 631
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKTYDR 334
LRGKTP VE+RKRD++ VV+++ K YD+
Sbjct: 632 LRGKTPQVEVRKRDEKCKVVIEKSKAYDQ 660
>gi|242083132|ref|XP_002441991.1| hypothetical protein SORBIDRAFT_08g006480 [Sorghum bicolor]
gi|241942684|gb|EES15829.1| hypothetical protein SORBIDRAFT_08g006480 [Sorghum bicolor]
Length = 372
Score = 533 bits (1373), Expect = e-149, Method: Compositional matrix adjust.
Identities = 259/312 (83%), Positives = 286/312 (91%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
QILP DLRD LQN+ ++ QLLEVILDLGR PEAR+LG+ GG+YLR +E+S +ELE
Sbjct: 57 LSELLQILPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQKELE 116
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
AQ AVGEFGGDNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV+DLL+Y +
Sbjct: 117 DAQKAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVHDLLNYKE 176
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SILF+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGD+PH+AIG ARRMQVP
Sbjct: 177 SILFLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDVPHAAIGGARRMQVP 236
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
EPS+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKN
Sbjct: 237 EPSMQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGERLANIIKN 296
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVD 303
P LSDLIGGV+TVTLGD+EARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVD
Sbjct: 297 PTLSDLIGGVETVTLGDDEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVD 356
Query: 304 MLLRGKTPLVEI 315
MLL GK PLVE+
Sbjct: 357 MLLHGKKPLVEV 368
>gi|297612841|ref|NP_001066391.2| Os12g0209000 [Oryza sativa Japonica Group]
gi|255670139|dbj|BAF29410.2| Os12g0209000 [Oryza sativa Japonica Group]
Length = 402
Score = 532 bits (1370), Expect = e-148, Method: Compositional matrix adjust.
Identities = 258/308 (83%), Positives = 283/308 (91%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
Q+LP DLRD LQN+ ++ QLLEVILDLGR PEAR+LG+ GG+YLR +E+S +ELE AQ
Sbjct: 65 LLQVLPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQQELEEAQ 124
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
AVGEFGGDNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +SIL
Sbjct: 125 RAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESIL 184
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
F+GRPGVGKTTVMREIARVL+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQV +PS
Sbjct: 185 FLGRPGVGKTTVMREIARVLADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPS 244
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QH+VMIEAVENHMPEV+IVDEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKNP L
Sbjct: 245 MQHRVMIEAVENHMPEVVIVDEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTL 304
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLL 306
SDLIGGV+TVTLGDEEARARR QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDMLL
Sbjct: 305 SDLIGGVETVTLGDEEARARRSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLL 364
Query: 307 RGKTPLVE 314
GK PLVE
Sbjct: 365 HGKKPLVE 372
>gi|222616800|gb|EEE52932.1| hypothetical protein OsJ_35561 [Oryza sativa Japonica Group]
Length = 451
Score = 528 bits (1360), Expect = e-147, Method: Compositional matrix adjust.
Identities = 256/305 (83%), Positives = 284/305 (93%)
Query: 27 QLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHR 86
+LL+VILDLGR PEAR+LG+ GG+YLR +E+S +ELE AQ AVGEFGGDNRAGIEGTLHR
Sbjct: 64 ELLQVILDLGRRPEARFLGDSGGQYLRDSEISQQELEEAQRAVGEFGGDNRAGIEGTLHR 123
Query: 87 ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVL 146
ISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +SILF+GRPGVGKTTVMREIARVL
Sbjct: 124 ISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESILFLGRPGVGKTTVMREIARVL 183
Query: 147 SDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIV 206
+DEFQKRVVIVDTSNEIGGDGDIPH+AIG ARRMQV +PS+QH+VMIEAVENHMPEV+IV
Sbjct: 184 ADEFQKRVVIVDTSNEIGGDGDIPHAAIGGARRMQVAQPSMQHRVMIEAVENHMPEVVIV 243
Query: 207 DEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARAR 266
DEIGTEAEA ACRSIAERGVMLIGTAHGE L NIIKNP LSDLIGGV+TVTLGDEEARAR
Sbjct: 244 DEIGTEAEAQACRSIAERGVMLIGTAHGEHLANIIKNPTLSDLIGGVETVTLGDEEARAR 303
Query: 267 RCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVVV 326
R QKSILERKAPPTF FLIEMRERHYWVTH+TE+SVDMLL GK PLVE+RKRD++F VV+
Sbjct: 304 RSQKSILERKAPPTFPFLIEMRERHYWVTHRTERSVDMLLHGKKPLVEVRKRDNKFQVVI 363
Query: 327 DRWKT 331
+RW T
Sbjct: 364 ERWAT 368
>gi|302789283|ref|XP_002976410.1| hypothetical protein SELMODRAFT_104906 [Selaginella moellendorffii]
gi|300156040|gb|EFJ22670.1| hypothetical protein SELMODRAFT_104906 [Selaginella moellendorffii]
Length = 403
Score = 491 bits (1264), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/328 (71%), Positives = 284/328 (86%), Gaps = 1/328 (0%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
QILP +R L KRG LLEV+LDLGR PEAR+L GG+YLR E++ ++L+ A++A
Sbjct: 12 QILPEGIRQNLLKHPKRGDLLEVVLDLGRRPEARFLKHRGGEYLRDNEITRDDLQAAEAA 71
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VGEFG DNRAGIEGTLHRISAIR+RKG I+GLTCRVGRAV+GH+DMV DLL GKSILF+
Sbjct: 72 VGEFGSDNRAGIEGTLHRISAIRNRKGVIIGLTCRVGRAVTGHVDMVRDLLDCGKSILFL 131
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
GRPGVGKTTV+REIARVL+D+ +KRVV+VDTSNEIGGDGD+PH AIG ARRMQVP+PS+Q
Sbjct: 132 GRPGVGKTTVIREIARVLADDLRKRVVVVDTSNEIGGDGDVPHPAIGGARRMQVPDPSMQ 191
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
H+VM+EAVENHMP+V+IVDEIGTEAEA ACR+IAERGVML+ TAHG+ LENIIKNP LSD
Sbjct: 192 HRVMVEAVENHMPQVVIVDEIGTEAEALACRTIAERGVMLVATAHGQTLENIIKNPTLSD 251
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 308
L+GG+ TVTLGD+EARAR QK++LERKAPPTF LIEMRER +W+ H+++KSVD LL+G
Sbjct: 252 LVGGIQTVTLGDDEARARGTQKTVLERKAPPTFSILIEMRERSHWIAHQSDKSVDNLLQG 311
Query: 309 KTPLVEIRKRDDRFNVVVDRWKTYDRHD 336
K P+VE+R RD+ F VV+++ + YD+ +
Sbjct: 312 KQPVVEMRTRDENFRVVIEK-RLYDKEE 338
>gi|302811106|ref|XP_002987243.1| hypothetical protein SELMODRAFT_125482 [Selaginella moellendorffii]
gi|300145140|gb|EFJ11819.1| hypothetical protein SELMODRAFT_125482 [Selaginella moellendorffii]
Length = 403
Score = 491 bits (1263), Expect = e-136, Method: Compositional matrix adjust.
Identities = 233/328 (71%), Positives = 284/328 (86%), Gaps = 1/328 (0%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
QILP +R L KRG LLEV+LDLGR PEAR+L GG+YLR E++ ++L+ A++A
Sbjct: 12 QILPEGIRQNLLKHPKRGDLLEVVLDLGRRPEARFLKHRGGEYLRDNEITRDDLQAAEAA 71
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VGEFG DNRAGIEGTLHRISAIR+RKG I+GLTCRVGRAV+GH+DMV DLL GKSILF+
Sbjct: 72 VGEFGSDNRAGIEGTLHRISAIRNRKGVIIGLTCRVGRAVTGHVDMVRDLLDCGKSILFL 131
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
GRPGVGKTTV+REIARVL+D+ +KRVV+VDTSNEIGGDGD+PH AIG ARRMQVP+PS+Q
Sbjct: 132 GRPGVGKTTVIREIARVLADDLRKRVVVVDTSNEIGGDGDVPHPAIGGARRMQVPDPSMQ 191
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
H+VM+EAVENHMP+V+IVDEIGTEAEA ACR+IAERGVML+ TAHG+ LENIIKNP LSD
Sbjct: 192 HRVMVEAVENHMPQVVIVDEIGTEAEALACRTIAERGVMLVATAHGQTLENIIKNPTLSD 251
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 308
L+GG+ TVTLGD+EARAR QK++LERKAPPTF LIEMRER +W+ H+++KSVD LL+G
Sbjct: 252 LVGGIQTVTLGDDEARARGTQKTVLERKAPPTFSILIEMRERSHWIAHQSDKSVDNLLQG 311
Query: 309 KTPLVEIRKRDDRFNVVVDRWKTYDRHD 336
K P+VE+R RD+ F VV+++ + YD+ +
Sbjct: 312 KQPVVEMRTRDENFRVVIEK-RLYDKEE 338
>gi|145347639|ref|XP_001418270.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578499|gb|ABO96563.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 335
Score = 470 bits (1209), Expect = e-130, Method: Compositional matrix adjust.
Identities = 228/322 (70%), Positives = 267/322 (82%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ +LP+D+RD ++N +R LLEV+LDLGR PEAR+LGE G +LR V EL A
Sbjct: 14 LYGVLPADVRDAVKNHPERKHLLEVVLDLGRAPEARFLGEIGSMFLREAPVVEAELVAAA 73
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
AVGEFGGDNRAGIEGTLHRIS IR+R+G IVG+TCRVGRAV+GHIDM+ D+L G+S+L
Sbjct: 74 KAVGEFGGDNRAGIEGTLHRISCIRNRRGHIVGMTCRVGRAVTGHIDMIRDILPSGESVL 133
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
F+GRPGVGKTTV+RE+ARVLSDE +KRVVI+DTSNEIGGDGDIPH AIG ARRMQVP+PS
Sbjct: 134 FLGRPGVGKTTVIREMARVLSDELKKRVVIIDTSNEIGGDGDIPHPAIGGARRMQVPDPS 193
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QH+VMIEAVENHMPEVIIVDEIGTEAEA ACR+IAERGV LIGTAHG+ LEN+IKNP L
Sbjct: 194 MQHRVMIEAVENHMPEVIIVDEIGTEAEALACRTIAERGVQLIGTAHGQLLENLIKNPTL 253
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLL 306
+DL+GGV TVTLGD+EARAR CQKSILER+ PPTF LIEM ER+ WV H +SVD +L
Sbjct: 254 TDLVGGVQTVTLGDDEARARGCQKSILERQGPPTFPILIEMHERNMWVAHNVAESVDEVL 313
Query: 307 RGKTPLVEIRKRDDRFNVVVDR 328
G P+V++R RD V V R
Sbjct: 314 SGARPVVQLRTRDGEGEVTVHR 335
>gi|384251818|gb|EIE25295.1| hypothetical protein COCSUDRAFT_13766, partial [Coccomyxa
subellipsoidea C-169]
Length = 322
Score = 455 bits (1171), Expect = e-125, Method: Compositional matrix adjust.
Identities = 216/306 (70%), Positives = 261/306 (85%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
+LP D+R+ L R LLEV+LDLGR PEAR+LG GG+YLR E++ ++L+ A+ AV
Sbjct: 1 VLPEDIREPLVQHQNRASLLEVVLDLGRRPEARFLGVGGGEYLRDAEITWDDLKAAEDAV 60
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G+FG DNRAG++GTLHRISA+R+RKG IVGLTCRVGRAV+GH+DM+ D+L S+LF+G
Sbjct: 61 GDFGSDNRAGVQGTLHRISAMRNRKGTIVGLTCRVGRAVTGHVDMIRDILDVPNSVLFLG 120
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTTV+RE+AR+LSD+ +KRVVIVDTSNEIGGDGD+PH AIG ARRMQVP+PS QH
Sbjct: 121 RPGVGKTTVIREMARILSDDLKKRVVIVDTSNEIGGDGDVPHPAIGGARRMQVPDPSQQH 180
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
KVM+EAVENHMPE++IVDEIGTEAEA ACR+IAERGV LI TAHG+ LEN++KNP LSDL
Sbjct: 181 KVMVEAVENHMPEIVIVDEIGTEAEALACRTIAERGVQLIATAHGQLLENLLKNPTLSDL 240
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 309
+GG+ +VTLGDEEARAR QKS+LERKAPPTF +IEMRER YWVTH E SVD LL GK
Sbjct: 241 VGGIQSVTLGDEEARARGTQKSVLERKAPPTFPLVIEMRERAYWVTHWVEDSVDCLLHGK 300
Query: 310 TPLVEI 315
P+V++
Sbjct: 301 VPVVQV 306
>gi|255072155|ref|XP_002499752.1| predicted protein [Micromonas sp. RCC299]
gi|226515014|gb|ACO61010.1| predicted protein [Micromonas sp. RCC299]
Length = 440
Score = 454 bits (1169), Expect = e-125, Method: Compositional matrix adjust.
Identities = 221/322 (68%), Positives = 266/322 (82%), Gaps = 5/322 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
+LP D+R L R QLLEV+LDLGR PEAR+ G+ ++LR +S +L+ A+++V
Sbjct: 1 MLPEDVRGILTTHRNRDQLLEVVLDLGRRPEARFAGDLPNEFLRDEVISQADLDAAEASV 60
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
GEFGGDNRAGIEGTLHRISAIR+R+G IVGLTCRVGRAV+GH++M+ D+L +SILF+G
Sbjct: 61 GEFGGDNRAGIEGTLHRISAIRNRRGKIVGLTCRVGRAVTGHVEMIEDMLTGNESILFLG 120
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTTV+REIARVLSDE KRVVI+DTSNEIGGDGDIPH AIG+ARRMQVP+P+LQH
Sbjct: 121 RPGVGKTTVIREIARVLSDELGKRVVIIDTSNEIGGDGDIPHRAIGSARRMQVPDPALQH 180
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
++MIEAVENHMPEVIIVDEIGTE EA ACR+IAERGV L+GTAHG+ LEN+IKNP L+DL
Sbjct: 181 QIMIEAVENHMPEVIIVDEIGTEEEAIACRTIAERGVQLVGTAHGQLLENLIKNPTLTDL 240
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 309
+GGV +VTLGD+EARAR CQK+I+ER+APPTF LIEM ER WV H E+SVD +L G
Sbjct: 241 VGGVQSVTLGDDEARARGCQKTIMERQAPPTFPILIEMHERSMWVAHNVEESVDEVLAGG 300
Query: 310 TPLVEIRKRDD-----RFNVVV 326
P+V++R RD RFN V
Sbjct: 301 RPMVQVRSRDQNTGQVRFNRTV 322
>gi|303285736|ref|XP_003062158.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456569|gb|EEH53870.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 570
Score = 441 bits (1134), Expect = e-121, Method: Compositional matrix adjust.
Identities = 220/329 (66%), Positives = 262/329 (79%), Gaps = 3/329 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEY 64
A +LPSD+R+ L R L+EVILDLGR P AR++G+ + LR+ V+ E+L
Sbjct: 85 AMIGMLPSDVREVLMCHPHRASLVEVILDLGRCPVARFVGDAVPDECLRAAPVTAEDLRK 144
Query: 65 AQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS 124
A+++VG+FGGDNRAGIEGTLHRIS IR+R G IVGLTCRVGRAV+GH+DM+ DLL +S
Sbjct: 145 AEASVGDFGGDNRAGIEGTLHRISCIRNRAGKIVGLTCRVGRAVNGHVDMIQDLLGSSES 204
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
LF+GRPGVGKTTV+RE+ARVLSDE KRVVI+DTSNEIGGDGD+PH AIG ARRMQVPE
Sbjct: 205 CLFLGRPGVGKTTVIREMARVLSDELGKRVVIIDTSNEIGGDGDVPHPAIGGARRMQVPE 264
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
PS QHKVMIEAVENHMPEVIIVDEIGTEAEA ACR+IAERGV L+GTAHG+ LEN+I+NP
Sbjct: 265 PSAQHKVMIEAVENHMPEVIIVDEIGTEAEALACRTIAERGVQLVGTAHGQLLENLIQNP 324
Query: 245 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDM 304
L DL+GG+ +VTLGD+EARAR CQK+I+ER P TF +IEM ER +WV H E+SVD
Sbjct: 325 TLKDLVGGIQSVTLGDDEARARGCQKTIMERAGPATFPIVIEMHERSFWVAHNVEESVDE 384
Query: 305 LLRGKTPLVEIRKRDDRFNVVVDRWKTYD 333
+L G P+V+ R R D VVV R YD
Sbjct: 385 ILTGGRPMVQTRARKD-GEVVVHR-AVYD 411
>gi|302832762|ref|XP_002947945.1| hypothetical protein VOLCADRAFT_57504 [Volvox carteri f.
nagariensis]
gi|300266747|gb|EFJ50933.1| hypothetical protein VOLCADRAFT_57504 [Volvox carteri f.
nagariensis]
Length = 366
Score = 431 bits (1107), Expect = e-118, Method: Compositional matrix adjust.
Identities = 209/309 (67%), Positives = 254/309 (82%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
Q+LP D+R+ L N +R L+EV+LDLGR PEAR+ G G+YLR EV+ +LE A +A
Sbjct: 19 QLLPEDIREPLVNHPQRASLVEVVLDLGRQPEARFEGIPAGEYLRKQEVTTADLEAAVAA 78
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VGEFG DNRAG+ GTLHRISAIR+R+G I+GLTCRVGRAVSGHI M+ DL+ G S+L +
Sbjct: 79 VGEFGADNRAGVPGTLHRISAIRNRRGIIIGLTCRVGRAVSGHIAMLKDLVESGHSVLLL 138
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
GRPGVGKTTV+REI R L+DE++KRVVIVDTSNEIGGDGD+PH AIG ARRMQV + + Q
Sbjct: 139 GRPGVGKTTVIREICRTLADEYRKRVVIVDTSNEIGGDGDVPHPAIGGARRMQVADATQQ 198
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
H VMIEAVENHMP+V++VDEIGTEAEA ACR+IAERGV LIGTAHG LEN+IKNP L+D
Sbjct: 199 HGVMIEAVENHMPQVVVVDEIGTEAEALACRTIAERGVQLIGTAHGCLLENLIKNPTLAD 258
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 308
L+GGV VTLGDEEAR R QK+ILERKAPPTF ++E+R R+++V H E SVD LL G
Sbjct: 259 LVGGVAAVTLGDEEARTRGTQKTILERKAPPTFPIVVEIRARNFYVAHWVEDSVDQLLLG 318
Query: 309 KTPLVEIRK 317
+ P+V++R+
Sbjct: 319 RMPVVQVRR 327
>gi|412993135|emb|CCO16668.1| single-stranded nucleic acid binding R3H domain-containing protein
[Bathycoccus prasinos]
Length = 484
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 212/326 (65%), Positives = 257/326 (78%), Gaps = 6/326 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLG----EFGGKYLRSTEVSVEEL 62
I+P D+R+++ + R +LLE++LDLGR PEAR+ G + + LR V+ EEL
Sbjct: 34 MLSIVPEDVREKISKHAHRSKLLEIVLDLGRQPEARFSGMEDVKKQSETLRDDVVTQEEL 93
Query: 63 EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH-- 120
++A+ VGEFGGDNRAG+ GTLHRIS IR+R G I+GLTCRVGRAV+GH+DM+ D+L+
Sbjct: 94 DHAERVVGEFGGDNRAGVTGTLHRISCIRNRSGKIIGLTCRVGRAVTGHVDMIADVLNRD 153
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 180
G+S+LF+G+PGVGKTTV+REIARVLSD+ QKRVVI+DTSNEIGGDGDIPH AIG+ARRM
Sbjct: 154 NGESVLFLGKPGVGKTTVIREIARVLSDDLQKRVVIIDTSNEIGGDGDIPHPAIGSARRM 213
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
QVP PS QHKVMIEAVENH PE+IIVDEIGTE EA ACR+IAERGV LIGTAHG LEN+
Sbjct: 214 QVPNPSEQHKVMIEAVENHTPEIIIVDEIGTEMEALACRTIAERGVQLIGTAHGRLLENL 273
Query: 241 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK 300
IKNP LSDL+GGV TVTLGD+EAR+R CQK+I ER AP TF ++EM R WV H E
Sbjct: 274 IKNPTLSDLVGGVTTVTLGDDEARSRGCQKTISERAAPATFPIVVEMHARSMWVEHDVEV 333
Query: 301 SVDMLLRGKTPLVEIRKRDDRFNVVV 326
SVD +L G P+V +R RD+ V V
Sbjct: 334 SVDDILVGNRPVVNLRTRDEEKRVQV 359
>gi|159488761|ref|XP_001702371.1| hypothetical protein CHLREDRAFT_108035 [Chlamydomonas reinhardtii]
gi|158271165|gb|EDO96991.1| predicted protein [Chlamydomonas reinhardtii]
Length = 308
Score = 427 bits (1098), Expect = e-117, Method: Compositional matrix adjust.
Identities = 208/308 (67%), Positives = 252/308 (81%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
Q+LP D+R+ L N +R L+EV+LDLGR PEAR+ G G+YLR EV+ +LE A +A
Sbjct: 1 QLLPEDIREPLVNHPQRASLVEVVLDLGRQPEARFQGIPAGEYLRKQEVTPADLEAAVAA 60
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VG+FG DNRAG+ GTLHRISAIR+R+GAI+GLTCRVGRAVSGHI M+ DL+ G S+L +
Sbjct: 61 VGDFGADNRAGVPGTLHRISAIRNRRGAIIGLTCRVGRAVSGHIAMLKDLVESGHSVLLL 120
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
GRPGVGKTTV+RE+ L+DE++KRVVIVDTSNEIGGDGD+PH AIG ARRMQV + Q
Sbjct: 121 GRPGVGKTTVIREMCATLADEYRKRVVIVDTSNEIGGDGDVPHPAIGGARRMQVADALQQ 180
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
H VMIEAVENHMP+V++VDEIGTEAEA ACR+IAERGV LIGTAHG LEN+IKNP LSD
Sbjct: 181 HAVMIEAVENHMPQVVVVDEIGTEAEALACRTIAERGVQLIGTAHGCLLENLIKNPTLSD 240
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 308
L+GGV VTLGDEEAR R QK+ILERKAPPTF ++E+R R+++V H E SVD LL G
Sbjct: 241 LVGGVAPVTLGDEEARLRGTQKTILERKAPPTFPIVVEIRARNFYVAHWVEDSVDQLLLG 300
Query: 309 KTPLVEIR 316
+ P+V++R
Sbjct: 301 RMPVVQVR 308
>gi|170079165|ref|YP_001735803.1| ATPase like protein [Synechococcus sp. PCC 7002]
gi|169886834|gb|ACB00548.1| ATPase like protein [Synechococcus sp. PCC 7002]
Length = 591
Score = 415 bits (1066), Expect = e-113, Method: Compositional matrix adjust.
Identities = 207/321 (64%), Positives = 248/321 (77%), Gaps = 3/321 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP +RDRL + + L+EV++DLGR+PEAR+ E + L +S E+L+Y+
Sbjct: 23 LLTILPDAIRDRLADHPNKNALIEVVMDLGRIPEARF--ENSTEDLGDRPISREDLQYSV 80
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F GDNRAGIE TLHRISA+R+R+G IVGLTCR+GRAV G I M+ +L+ GKSIL
Sbjct: 81 ERVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQELVESGKSIL 140
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPHSAIG ARRMQV P
Sbjct: 141 LLGRPGVGKTTALREIARVLADDFGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVATPE 200
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQHKVMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 201 LQHKVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQLVGTAHGNRIENLIKNPTL 260
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ VTLGDEEAR RR QK++LERKAPPTF +EM ER WV H ++D L
Sbjct: 261 SDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQRWVVHSDVSITIDTL 320
Query: 306 LRGKTPLVEIRKRDDRFNVVV 326
LRG PL+E+R DD+ NV +
Sbjct: 321 LRGHQPLLEVRTVDDQGNVKI 341
>gi|22298282|ref|NP_681529.1| hypothetical protein tlr0740 [Thermosynechococcus elongatus BP-1]
gi|22294461|dbj|BAC08291.1| ycf45 [Thermosynechococcus elongatus BP-1]
Length = 567
Score = 414 bits (1063), Expect = e-113, Method: Compositional matrix adjust.
Identities = 208/323 (64%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP L L + +R +LLE++LDLGRLPEAR++ +YL T VS E L+YA
Sbjct: 18 LLAILPPPLGQSLTDHPQREELLEIVLDLGRLPEARFI--HSTQYLAETPVSREMLQYAV 75
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VGEF GDNRAGIE TLHRISA+R+R+G I+GLTCRVGRAV G I M+ DL+ G+SIL
Sbjct: 76 DRVGEFSGDNRAGIERTLHRISALRNRQGTIIGLTCRVGRAVFGTIGMIRDLVESGQSIL 135
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 136 LLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGKARRMQVARPE 195
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV LIGTAHG +EN++KNP L
Sbjct: 196 LQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLIGTAHGNQIENLMKNPTL 255
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
+DL+GG+ +VTLGDEEAR R QKS+LERKAPPTF +EM ER WV H SVD+L
Sbjct: 256 ADLVGGIQSVTLGDEEARRRGTQKSVLERKAPPTFQMAVEMLERDRWVVHLDVAASVDLL 315
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P+ EIR +VV+ R
Sbjct: 316 LRGRQPVPEIRSIAADGSVVISR 338
>gi|254409994|ref|ZP_05023774.1| R3H domain protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196183030|gb|EDX78014.1| R3H domain protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 598
Score = 409 bits (1050), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP D+R L+ R L+EV++DLGR PE R+ G +YL T V+ E+L Y
Sbjct: 37 LLAILPEDIRQILEQHPHRDNLIEVVMDLGRFPEVRFPS--GAEYLSETPVTAEQLNYCV 94
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F GDNRAG+E TLHRISAIR+R G I+GLTCRVGRAV G I +++DL+ G+SIL
Sbjct: 95 ERVGHFSGDNRAGLEKTLHRISAIRNRPGDIIGLTCRVGRAVFGTIGLIHDLVERGQSIL 154
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ QKRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 155 MLGRPGVGKTTALREIARVLADDLQKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPE 214
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 215 LQHQVMIEAVENHTPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 274
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 275 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDAL 334
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P ++R DD+ V++ R
Sbjct: 335 LRGRKPNPQMRTVDDQNKVIITR 357
>gi|434391656|ref|YP_007126603.1| single-stranded nucleic acid binding R3H domain-containing protein
[Gloeocapsa sp. PCC 7428]
gi|428263497|gb|AFZ29443.1| single-stranded nucleic acid binding R3H domain-containing protein
[Gloeocapsa sp. PCC 7428]
Length = 582
Score = 408 bits (1049), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/325 (62%), Positives = 244/325 (75%), Gaps = 3/325 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP ++R L+ R L+EV++DLGRLPEAR+ + +YL T +S E+L
Sbjct: 10 LLDILPLEIRQALEYHPLRDSLVEVVMDLGRLPEARFPNQ--AEYLSDTPISQEQLNECI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VGEFGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G+SIL
Sbjct: 68 QRVGEFGGDNRAGIEKTLHRISAIRNRTGKIIGLTCRVGRAVYGTIGMIRDLVETGRSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVARPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEAMAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR RR QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDSL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWK 330
LRG P ++R DD V V R +
Sbjct: 308 LRGHQPSPQVRTVDDAGKVTVTRQQ 332
>gi|282897384|ref|ZP_06305386.1| Single-stranded nucleic acid binding R3H [Raphidiopsis brookii D9]
gi|281198036|gb|EFA72930.1| Single-stranded nucleic acid binding R3H [Raphidiopsis brookii D9]
Length = 573
Score = 408 bits (1048), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/326 (62%), Positives = 248/326 (76%), Gaps = 3/326 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP DL +LQ S+R L+EV+LDLGRLPEAR+ G +YL + ++ +++
Sbjct: 9 LLEILPQDLEKQLQYHSQRDNLVEVVLDLGRLPEARFPG--AAEYLSQSPITQSQIDDCI 66
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 67 QRVGNFGGDNRAGIEQTLHRISAIRNRNGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 126
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRV+I+DTSNEI GDGDI H AIG ARRMQV P
Sbjct: 127 MLGRPGVGKTTALREIARVLADDLHKRVIIIDTSNEIAGDGDIAHPAIGRARRMQVARPE 186
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 187 LQHQVMIEAVENHMPEVIIIDEIGTELEALASRTIAERGVQLVGTAHGNQIENLIKNPTL 246
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR RR QK++LERKAPPTF +EM ER WV H++ ++VD L
Sbjct: 247 SDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERERWVVHESVAETVDTL 306
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKT 331
LRG+ P + R D++ V + R T
Sbjct: 307 LRGRQPNPQTRTVDEQGKVSIARPLT 332
>gi|75906351|ref|YP_320647.1| single-stranded nucleic acid binding R3H [Anabaena variabilis ATCC
29413]
gi|75700076|gb|ABA19752.1| Single-stranded nucleic acid binding R3H [Anabaena variabilis ATCC
29413]
Length = 579
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 204/323 (63%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L+N KR L+EV+LDLGR PEAR+ + +YL T V+ +++
Sbjct: 10 LLDILPQDLRQVLENHPKRDSLVEVVLDLGRRPEARFPNQ--AEYLSETPVTQAQIDDCV 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 QRVGNFGGDNRAGIEQTLHRISAIRNRSGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R DD+ V + R
Sbjct: 308 LRGRQPSPQTRTVDDQGKVAITR 330
>gi|411119520|ref|ZP_11391900.1| hypothetical protein OsccyDRAFT_3443 [Oscillatoriales
cyanobacterium JSC-12]
gi|410711383|gb|EKQ68890.1| hypothetical protein OsccyDRAFT_3443 [Oscillatoriales
cyanobacterium JSC-12]
Length = 661
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/331 (61%), Positives = 250/331 (75%), Gaps = 3/331 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ ++ +L+ +R L+EV++DLGR PEAR+ G +YL T VS +++
Sbjct: 57 LNKLLHILPAPIQHKLREHPQRDTLVEVVMDLGRRPEARFPGR--AEYLAETPVSQQDIN 114
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ VG+FGGDNRAGIE TLHRISAIR+R+G I+GLTCRVGRAV G I M+ DL+ GK
Sbjct: 115 ECIARVGDFGGDNRAGIERTLHRISAIRNRRGEIIGLTCRVGRAVFGTIGMIRDLVESGK 174
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH AIG ARRMQV
Sbjct: 175 SILMLGRPGVGKTTALREIARVLADELDKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVA 234
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 235 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLIKN 294
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ +VTLGDEEAR R QKS+LERKAPPTF +EM ER WV H+ +++
Sbjct: 295 PTLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTFDIAVEMLERQRWVVHEHVAETI 354
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 333
D LLRG+ P ++R +D VV+ + D
Sbjct: 355 DSLLRGRQPNPQVRTINDVGKVVITHELSSD 385
>gi|86605726|ref|YP_474489.1| R3H domain-containing protein [Synechococcus sp. JA-3-3Ab]
gi|86554268|gb|ABC99226.1| R3H domain protein [Synechococcus sp. JA-3-3Ab]
Length = 633
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/326 (61%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
G +LP+ +R RL+ + +L+EV+LDLGR PEAR+ G YL V+ +L+
Sbjct: 37 LGKLLDVLPASIRQRLEQHPQLDRLVEVVLDLGRRPEARFPG--FADYLSEEVVTRADLD 94
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
S VGEF GDNRAGI TLHRISAIR+R+G I+GLTCRVGR V G I M+ DL+ G+
Sbjct: 95 LVISQVGEFSGDNRAGIASTLHRISAIRNRQGTIIGLTCRVGRCVIGVISMIRDLVEQGR 154
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+DE KRV+I+DTSNEI GDGD+PH IG ARRMQV
Sbjct: 155 SMLLLGRPGVGKTTALREIARVLADELHKRVIIIDTSNEIAGDGDVPHPGIGRARRMQVA 214
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQHKVMIEAVENHMPEV+++DEIGTE EA A R+IAERGV L+ TAHG ++N+IKN
Sbjct: 215 SPELQHKVMIEAVENHMPEVVVIDEIGTELEALASRTIAERGVQLVATAHGNRIDNLIKN 274
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTLGDEEAR R CQKS+LERKAPPTF +EM ER WV H+ +V
Sbjct: 275 PTLSDLIGGIQSVTLGDEEARRRGCQKSVLERKAPPTFEIAVEMLERDRWVIHEDVAATV 334
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDR 328
D LLR + PLV++R D+R VV++R
Sbjct: 335 DRLLRNREPLVQLRSLDERGQVVIER 360
>gi|427739198|ref|YP_007058742.1| hypothetical protein Riv7116_5830 [Rivularia sp. PCC 7116]
gi|427374239|gb|AFY58195.1| hypothetical protein Riv7116_5830 [Rivularia sp. PCC 7116]
Length = 581
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 201/326 (61%), Positives = 245/326 (75%), Gaps = 3/326 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L+ +R L+EV+LDLGR PEAR+ G +YL ++ ++++
Sbjct: 10 LLAILPQDLRQMLEQHPQRDSLVEVVLDLGRYPEARF--PSGAEYLSEVPITQQQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G+SIL
Sbjct: 68 VRVGTFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVHGTISMIRDLVENGQSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTTV+REIARVL+D+ KRVVI+DTSNEI GDGD+PH AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTVLREIARVLADDLDKRVVIIDTSNEIAGDGDVPHPAIGKARRMQVAHPD 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG +EN+IKNP L
Sbjct: 188 QQHQVMIEAVENHMPEVIVIDEIGTELEALASRTIAERGVQLIGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM+ER WV H++ ++D L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMQERQRWVVHESVADTIDNL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKT 331
LRG+ P ++R DD V + R T
Sbjct: 308 LRGRQPTPQVRTIDDNGKVAIARHLT 333
>gi|440684212|ref|YP_007159007.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena cylindrica PCC 7122]
gi|428681331|gb|AFZ60097.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena cylindrica PCC 7122]
Length = 579
Score = 406 bits (1044), Expect = e-111, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L+N KR L+EV+LDLGR PEAR+ E +YL T V+ +++
Sbjct: 10 LLDILPQDLRQVLENHPKRDSLVEVVLDLGRRPEARFPHE--AEYLSETTVNQAQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 QRVGTFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDI H AIG ARRMQV +P
Sbjct: 128 MLGRPGVGKTTALREIARVLADDFNKRVVIIDTSNEIAGDGDIAHPAIGRARRMQVAKPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
DL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H+T +VD L
Sbjct: 248 CDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHETVADTVDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R D++ V + R
Sbjct: 308 LRGRQPNPQTRTVDEKGKVAISR 330
>gi|332711942|ref|ZP_08431872.1| hypothetical protein LYNGBM3L_69500 [Moorea producens 3L]
gi|332349270|gb|EGJ28880.1| hypothetical protein LYNGBM3L_69500 [Moorea producens 3L]
Length = 647
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 200/323 (61%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP+++R L+ ++R L+EVI+DLGR PE R+ +YL V++E++ +
Sbjct: 80 LLDILPAEIRSLLEQHAERDSLIEVIMDLGRFPEVRFRDR--AEYLSDQPVTIEQINHCV 137
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F GDNRAGIEGTLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 138 ERVGSFSGDNRAGIEGTLHRISAIRNRPGEIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 197
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 198 MLGRPGVGKTTALREIARVLADELDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVASPE 257
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+GTAHG +EN+IKNP L
Sbjct: 258 HQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVGTAHGNRIENLIKNPTL 317
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 318 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERKRWVVHESVADTVDNL 377
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P +R D+ V + R
Sbjct: 378 LRGRQPNPPVRTEDENGKVTITR 400
>gi|119512852|ref|ZP_01631918.1| Single-stranded nucleic acid binding R3H [Nodularia spumigena
CCY9414]
gi|119462480|gb|EAW43451.1| Single-stranded nucleic acid binding R3H [Nodularia spumigena
CCY9414]
Length = 578
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/323 (62%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L++ +R L+EV+LDLGR PEAR+ + +YL T V+ +++
Sbjct: 10 LLDILPQDLRQVLESHPQRDSLVEVVLDLGRCPEARFPNQ--AEYLSETPVTQAQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F GDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 QRVGTFSGDNRAGIELTLHRISAIRNRSGRIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGD+PH AIG ARRMQV +P
Sbjct: 128 MLGRPGVGKTTALREIARVLADDFHKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVAQPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVIHESVADTVDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R DD+ V V R
Sbjct: 308 LRGRQPSPQTRTVDDQGKVAVTR 330
>gi|282900213|ref|ZP_06308167.1| Single-stranded nucleic acid binding R3H [Cylindrospermopsis
raciborskii CS-505]
gi|281194888|gb|EFA69831.1| Single-stranded nucleic acid binding R3H [Cylindrospermopsis
raciborskii CS-505]
Length = 575
Score = 406 bits (1043), Expect = e-111, Method: Compositional matrix adjust.
Identities = 203/326 (62%), Positives = 247/326 (75%), Gaps = 3/326 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP DL +LQ+ +R L+EV+LDLGRLPEAR+ G +YL + V+ +++
Sbjct: 9 LLEILPQDLEKQLQDHPQRDNLVEVVLDLGRLPEARFPGT--AEYLSQSPVTQSQIDDCI 66
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRA+ G I M+ DL+ GKSIL
Sbjct: 67 QRVGNFGGDNRAGIEQTLHRISAIRNRNGKIIGLTCRVGRAIFGTIGMIRDLVETGKSIL 126
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRV+I+DTSNEI GDGDI H AIG ARRMQV P
Sbjct: 127 MLGRPGVGKTTALREIARVLADDLHKRVIIIDTSNEIAGDGDIAHPAIGRARRMQVARPE 186
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 187 LQHQVMIEAVENHMPEVIIIDEIGTELEALASRTIAERGVQLVGTAHGNQIENLIKNPTL 246
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR RR QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 247 SDLVGGIQAVTLGDDEARRRRSQKTVLERKAPPTFEIAVEMLERERWVVHESVADTVDAL 306
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKT 331
LRG+ P + R D++ V + R T
Sbjct: 307 LRGRQPNPQTRTVDEQGKVSIARPLT 332
>gi|427730839|ref|YP_007077076.1| hypothetical protein Nos7524_3698 [Nostoc sp. PCC 7524]
gi|427366758|gb|AFY49479.1| hypothetical protein Nos7524_3698 [Nostoc sp. PCC 7524]
Length = 578
Score = 405 bits (1042), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/323 (63%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L+N KR L+EV+LDLGR PEAR+ + +YL V+ E+++
Sbjct: 10 LLDILPQDLRQILENHPKRDSLVEVVLDLGRRPEARFPNQ--AEYLSEIPVTQEQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 QRVGTFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R DD+ V V R
Sbjct: 308 LRGRQPNPQTRTVDDQGKVSVTR 330
>gi|81299436|ref|YP_399644.1| single-stranded nucleic acid binding R3H [Synechococcus elongatus
PCC 7942]
gi|81168317|gb|ABB56657.1| Single-stranded nucleic acid binding R3H [Synechococcus elongatus
PCC 7942]
Length = 588
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/317 (62%), Positives = 246/317 (77%), Gaps = 3/317 (0%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVE 60
++ +ILP LRD+L ++ +L+EV+LDLGR PEAR+ G +YL T VS E
Sbjct: 23 VDNLDELLEILPPQLRDQLLRHPQKDRLVEVVLDLGRFPEARF--PEGAEYLSETPVSRE 80
Query: 61 ELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH 120
+L Y + VG+FG DNRAGIE TLHRISAIR+RKG ++GLTCRVGRAV G + M+ DL+
Sbjct: 81 DLAYCAARVGDFGADNRAGIERTLHRISAIRNRKGEVIGLTCRVGRAVFGTVGMIRDLVE 140
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 180
G+S+LF+GRPGVGKTT +RE+ARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARR+
Sbjct: 141 TGQSLLFLGRPGVGKTTALREVARVLADDLLKRVVIIDTSNEIAGDGDIPHPAIGRARRL 200
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
QV P LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+
Sbjct: 201 QVARPELQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQIENL 260
Query: 241 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TE 299
IKNP LSDL+GG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER+ WV H+
Sbjct: 261 IKNPTLSDLVGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERYRWVVHEDVA 320
Query: 300 KSVDMLLRGKTPLVEIR 316
+VD+LLR P ++R
Sbjct: 321 NTVDLLLRQGQPNPQVR 337
>gi|427723001|ref|YP_007070278.1| single-stranded nucleic acid binding R3H domain-containing protein
[Leptolyngbya sp. PCC 7376]
gi|427354721|gb|AFY37444.1| single-stranded nucleic acid binding R3H domain-containing protein
[Leptolyngbya sp. PCC 7376]
Length = 594
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/321 (63%), Positives = 246/321 (76%), Gaps = 3/321 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP L +L +R +L+EV++DLGR+PEAR++ G + L ++ E+L Y+
Sbjct: 24 LLTILPEPLHKQLATHPRRDELIEVVMDLGRIPEARFVE--GTEDLGEVVITSEDLAYSV 81
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ VG F GDNRAGIE TLHRISA+R+R+G IVGLTCR+GRAV G I M+ +L+ GKSIL
Sbjct: 82 NRVGMFSGDNRAGIERTLHRISAMRNRQGDIVGLTCRIGRAVFGTILMIQELVESGKSIL 141
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+PHSAIG ARRMQV P
Sbjct: 142 LLGRPGVGKTTALREIARVLADDVGKRVVIIDTSNEIAGDGDVPHSAIGRARRMQVASPE 201
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 202 QQHRVMIEAVENHMPEVIIIDEIGTELEAQAARTIAERGVQLVGTAHGNRIENLIKNPTL 261
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ VTLGDEEAR RR QK++LERKAPPTF +EM ER WV H+ ++D L
Sbjct: 262 SDLVGGIQAVTLGDEEARKRRSQKTVLERKAPPTFDVAVEMLERQKWVVHEDVSITIDTL 321
Query: 306 LRGKTPLVEIRKRDDRFNVVV 326
LRG PL+EIR DD NV V
Sbjct: 322 LRGHQPLLEIRTVDDEGNVKV 342
>gi|443316490|ref|ZP_21045932.1| hypothetical protein Lep6406DRAFT_00028420 [Leptolyngbya sp. PCC
6406]
gi|442783923|gb|ELR93821.1| hypothetical protein Lep6406DRAFT_00028420 [Leptolyngbya sp. PCC
6406]
Length = 575
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/321 (63%), Positives = 245/321 (76%), Gaps = 3/321 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP+ LR +L+ R QL+EV+LDLGR PEAR+ G +YL + VS E L++
Sbjct: 4 LLAILPNLLRSQLEVHPHRDQLIEVVLDLGRRPEARFPN--GAEYLGESVVSQETLQHCI 61
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G SIL
Sbjct: 62 ERVGYFGGDNRAGIEQTLHRISAIRNRSGDIIGLTCRVGRAVFGTIGMIRDLIETGGSIL 121
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ QKRVVI+DTSNEI GDGDIPH AIG ARRMQV +P
Sbjct: 122 MLGRPGVGKTTALREIARVLADDLQKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAQPE 181
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP L
Sbjct: 182 LQHQVMIEAVENHMPEVIVIDEIGTELEATAARTIAERGVQLVGTAHGNRLENLIKNPTL 241
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
SDL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER WV H + +VD L
Sbjct: 242 SDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERQRWVIHEEVANTVDNL 301
Query: 306 LRGKTPLVEIRKRDDRFNVVV 326
LRG+ P ++R+ + V +
Sbjct: 302 LRGRPPAAQVRETAENGRVTI 322
>gi|428203424|ref|YP_007082013.1| hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327]
gi|427980856|gb|AFY78456.1| hypothetical protein Ple7327_3231 [Pleurocapsa sp. PCC 7327]
Length = 583
Score = 405 bits (1040), Expect = e-110, Method: Compositional matrix adjust.
Identities = 203/324 (62%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+ILP +R +++ K L+EV++DLGRLPEAR+ E YL VS E+L+
Sbjct: 16 LNKLLEILPEKIRAKVEQHPKLESLVEVVMDLGRLPEARFPNE--AVYLGDVPVSKEDLQ 73
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ VG F GDNRAGIE TLHRISAIR+R G IVGLTCRVGRA+ G I+ + DL+ GK
Sbjct: 74 YSIDRVGTFSGDNRAGIERTLHRISAIRNRTGEIVGLTCRVGRAILGTIEAIRDLVETGK 133
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+DEF KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 134 SILLLGRPGVGKTTALREIARVLADEFHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 193
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPE+I++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKN
Sbjct: 194 RPELQHQVMIEAVENHMPEIIVIDEIGTELEAMAARTIAERGVQLVGTAHGNRIENLIKN 253
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ +V
Sbjct: 254 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVVHEDVANTV 313
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ P +++R D+ V +
Sbjct: 314 DDLLRGREPTLQVRTIDENGRVTI 337
>gi|119484836|ref|ZP_01619318.1| Single-stranded nucleic acid binding R3H [Lyngbya sp. PCC 8106]
gi|119457654|gb|EAW38778.1| Single-stranded nucleic acid binding R3H [Lyngbya sp. PCC 8106]
Length = 582
Score = 404 bits (1039), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/328 (60%), Positives = 250/328 (76%), Gaps = 5/328 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
I+P ++R ++ +R L+E++LDLGR PEAR+ G +Y+ T VS E+L++
Sbjct: 10 LLNIVPEEIRRNVELHPQRNSLIEIVLDLGRCPEARF--PLGAEYISQTAVSWEDLDHCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S +GEF GDNRAGIE TLHRISAIR+R G ++GLTCRVGRAV G + M+ DL+ G+SIL
Sbjct: 68 SQIGEFSGDNRAGIERTLHRISAIRNRTGKVIGLTCRVGRAVFGKVGMIRDLVETGQSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELSKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG +EN++KNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEAIAARTIAERGVQLIGTAHGNRIENLMKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKS-VDML 305
+DLIGG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H++ S +D L
Sbjct: 248 ADLIGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERDRWVVHESVASTIDSL 307
Query: 306 LRGKTPLVEIRKRDD--RFNVVVDRWKT 331
LRG P +++R D+ ++V +R+ +
Sbjct: 308 LRGMQPTLQVRTMDEAGEVSMVEERYNS 335
>gi|428305288|ref|YP_007142113.1| single-stranded nucleic acid binding R3H domain-containing protein
[Crinalium epipsammum PCC 9333]
gi|428246823|gb|AFZ12603.1| single-stranded nucleic acid binding R3H domain-containing protein
[Crinalium epipsammum PCC 9333]
Length = 589
Score = 404 bits (1038), Expect = e-110, Method: Compositional matrix adjust.
Identities = 200/326 (61%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP +R L+ ++ L+EV++DLGRLPEAR+ + +YL T VS E++
Sbjct: 16 LSKLLHILPEQIRSSLEKHPQQESLIEVVMDLGRLPEARFPNK--AEYLGETPVSKEDIN 73
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y VG F GDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G
Sbjct: 74 YCIQRVGLFSGDNRAGIERTLHRISAIRNRTGDIIGLTCRVGRAVFGTIAMIRDLVETGN 133
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 134 SILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 193
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKN
Sbjct: 194 RPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVQLVGTAHGNHIENLIKN 253
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSV 302
P LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ERH WV H++ +V
Sbjct: 254 PTLSDLVGGIQAVTLGDDEARRRASQKTVLERKAPPTFEIAVEMLERHRWVVHESVSDTV 313
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDR 328
D LLR + P ++R ++ +V + R
Sbjct: 314 DTLLRNRKPSPQVRTVNESGHVTITR 339
>gi|126659203|ref|ZP_01730341.1| hypothetical protein CY0110_04488 [Cyanothece sp. CCY0110]
gi|126619508|gb|EAZ90239.1| hypothetical protein CY0110_04488 [Cyanothece sp. CCY0110]
Length = 576
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/324 (62%), Positives = 245/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILPS +R+++++ +L+EV++DLGRLPEAR+ GE YL T VS +L+
Sbjct: 7 LSKLLDILPSSIRNQIKDHPNCDRLVEVVMDLGRLPEARFPGE--AIYLGDTPVSASDLQ 64
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ VG F GDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G+
Sbjct: 65 YSIQRVGIFSGDNRAGIERTLHRISAIRNRTGDIIGLTCRVGRAVFGTISMIRDLVETGQ 124
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 125 SLLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 184
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQHKVMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KN
Sbjct: 185 APELQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLMKN 244
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H ++
Sbjct: 245 PTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKWVVHDDVAYTI 304
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D+LLR P ++R D+ NV +
Sbjct: 305 DILLRNGQPNPQVRTVDENGNVQI 328
>gi|428768784|ref|YP_007160574.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium aponinum PCC 10605]
gi|428683063|gb|AFZ52530.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium aponinum PCC 10605]
Length = 582
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/327 (60%), Positives = 251/327 (76%), Gaps = 3/327 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILPS+++ L+N ++ L+E++LDLGR PEAR+ +YL ++ E++ +
Sbjct: 19 LLEILPSNIKQPLENHPQKNSLIEIVLDLGRKPEARF--SHRTEYLSDQLITREDITHCV 76
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ VG F DNRAGIE TLHRISAIR+R+G I+GLTCR+GRAV G I M+ +L+ G+SIL
Sbjct: 77 ARVGNFSADNRAGIERTLHRISAIRNRQGDIIGLTCRIGRAVFGTILMIKELVESGQSIL 136
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGD+PH AIG ARRMQV P
Sbjct: 137 LLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVARPE 196
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP L
Sbjct: 197 LQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHLENLIKNPTL 256
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDLIGG+ +VTLGDEEAR R QK++LERKAPPTF +EM ER WV H+ ++VD L
Sbjct: 257 SDLIGGIQSVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMWERQKWVVHEDVAQTVDYL 316
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKTY 332
LRGK P+ ++R+ +D V + R ++
Sbjct: 317 LRGKQPIPQLRQVNDEGEVSITRDPSF 343
>gi|17229801|ref|NP_486349.1| hypothetical protein alr2309 [Nostoc sp. PCC 7120]
gi|17131401|dbj|BAB74008.1| alr2309 [Nostoc sp. PCC 7120]
Length = 579
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L+N KR L+EV+LDLGR PEAR+ + +YL T V+ +++
Sbjct: 10 LLDILPQDLRQILENHPKRDSLVEVVLDLGRRPEARFPNQ--AEYLSETPVTQAQIDDCV 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRIS IR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 QRVGNFGGDNRAGIEQTLHRISGIRNRSGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R D++ V + R
Sbjct: 308 LRGRQPSPQTRTVDEQGKVAITR 330
>gi|428200832|ref|YP_007079421.1| hypothetical protein Ple7327_0407 [Pleurocapsa sp. PCC 7327]
gi|427978264|gb|AFY75864.1| hypothetical protein Ple7327_0407 [Pleurocapsa sp. PCC 7327]
Length = 492
Score = 403 bits (1036), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/323 (62%), Positives = 243/323 (75%), Gaps = 2/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
I P +R L+ +R L+EV+LDLGR PEAR+L E +YL T V+ E+++Y
Sbjct: 10 LLDIFPPQIRQILKQHPQRDNLIEVVLDLGRRPEARFLDERA-EYLSDTLVTREQIDYCI 68
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FG DNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G IDM+ DL+ GKSIL
Sbjct: 69 DRVGRFGTDNRAGIEQTLHRISAIRNRNGGIIGLTCRVGRAVYGTIDMIRDLVETGKSIL 128
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRV+IVDTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 129 MLGRPGVGKTTALREIARVLADDLNKRVIIVDTSNEIAGDGDIPHPAIGRARRMQVASPE 188
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQ+KVMIEAVENHMP+ I++DEIGTE EA+A RSIAERGV L+GTAHG +EN+IKNPIL
Sbjct: 189 LQYKVMIEAVENHMPQAIVIDEIGTELEAYAARSIAERGVQLVGTAHGNSIENLIKNPIL 248
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
DL+GG+ +VTLGDEEAR R QK++ ERKAPPTF +EM ER WV H++ +VD L
Sbjct: 249 CDLVGGIQSVTLGDEEARRRGSQKTVRERKAPPTFDIAVEMLERQRWVVHESVADTVDSL 308
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG P +++R + V + R
Sbjct: 309 LRGHQPHLQVRTMNGNGRVAITR 331
>gi|428302124|ref|YP_007140430.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 6303]
gi|428238668|gb|AFZ04458.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 6303]
Length = 588
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 201/326 (61%), Positives = 244/326 (74%), Gaps = 3/326 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+LP DLR L+N +R L+EV+LDLGR PEAR+ G +YL ++ ++++
Sbjct: 10 LLDVLPQDLRQALENHPQRDSLVEVVLDLGRRPEARFPG--SAEYLSEQPITQQQIDECV 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRA+ G I M+ DL+ GKSIL
Sbjct: 68 SRVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAIFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVPHPAIGKARRMQVSRPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 EQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKA PTF +EM ER WV H++ +VDML
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKALPTFEIAVEMHERQRWVVHESVADTVDML 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKT 331
LRG+ P + R D+ V + R T
Sbjct: 308 LRGRQPSPQTRTVDENGKVAIARHLT 333
>gi|428213099|ref|YP_007086243.1| hypothetical protein Oscil6304_2716 [Oscillatoria acuminata PCC
6304]
gi|428001480|gb|AFY82323.1| hypothetical protein Oscil6304_2716 [Oscillatoria acuminata PCC
6304]
Length = 615
Score = 403 bits (1035), Expect = e-110, Method: Compositional matrix adjust.
Identities = 198/326 (60%), Positives = 243/326 (74%), Gaps = 3/326 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+ILP +R+ L N S L+EV++DLGRLPEAR+ + +Y+ V+ +L+
Sbjct: 36 LSQLLEILPETIREHLTNHSSLSNLIEVVMDLGRLPEARFPNK--AEYISDIPVTRSDLK 93
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
YA VG F GDNRAGIE TLHRISAIR+R G I+GLTCRVGR+V G I M+ DL+ G+
Sbjct: 94 YAIERVGHFSGDNRAGIEQTLHRISAIRNRTGEIIGLTCRVGRSVFGTIHMIRDLVESGQ 153
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 154 SILMLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 213
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QHKVMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKN
Sbjct: 214 APEFQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKN 273
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P L DL+GG+ +VTLGDEEAR R QK++LERKAPPTF +EM ER WV H + ++V
Sbjct: 274 PTLCDLVGGIQSVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMSERKRWVVHERVAETV 333
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDR 328
D LLRG+ P +++R + V + +
Sbjct: 334 DSLLRGRQPDLQVRTVSESGKVTITK 359
>gi|427705776|ref|YP_007048153.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc sp. PCC 7107]
gi|427358281|gb|AFY41003.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc sp. PCC 7107]
Length = 578
Score = 402 bits (1034), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/323 (62%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L+N +R L+EV+LDLGR PEAR+ + +YL V+ +++
Sbjct: 10 LLDILPQDLRQVLENHPQRDNLVEVVLDLGRRPEARFPNQ--AEYLSEIPVTQAQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRA+ G I M+ DL+ GKSIL
Sbjct: 68 QRVGTFGGDNRAGIEQTLHRISAIRNRNGKIIGLTCRVGRAIFGTISMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R DD V + R
Sbjct: 308 LRGRQPSPQTRTVDDNGKVAMTR 330
>gi|254423701|ref|ZP_05037419.1| R3H domain protein [Synechococcus sp. PCC 7335]
gi|196191190|gb|EDX86154.1| R3H domain protein [Synechococcus sp. PCC 7335]
Length = 665
Score = 402 bits (1033), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/321 (61%), Positives = 245/321 (76%), Gaps = 3/321 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP+ +RD+L++ S+R L+EV+LDLGR PEAR+ +YL VS +L++
Sbjct: 48 LLEILPAYIRDQLESHSRRDHLIEVVLDLGRQPEARFPDAV--QYLSEAPVSKADLQHCI 105
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAG+E TLHRISA+R+RKG ++GLTCRVGRAV G I M+ DL+ G SIL
Sbjct: 106 DRVGHFGGDNRAGLEETLHRISAMRNRKGDVIGLTCRVGRAVFGTITMIRDLVETGNSIL 165
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 166 MLGRPGVGKTTALREIARVLADDLMKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSHPE 225
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP L
Sbjct: 226 KQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLIKNPTL 285
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER WV H+ +VD +
Sbjct: 286 SDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERQRWVVHEDVSSTVDFI 345
Query: 306 LRGKTPLVEIRKRDDRFNVVV 326
LRG+ P ++R + VV+
Sbjct: 346 LRGQVPGQQVRSINAEDQVVI 366
>gi|113476582|ref|YP_722643.1| single-stranded nucleic acid binding R3H [Trichodesmium erythraeum
IMS101]
gi|110167630|gb|ABG52170.1| single-stranded nucleic acid binding R3H [Trichodesmium erythraeum
IMS101]
Length = 590
Score = 402 bits (1032), Expect = e-109, Method: Compositional matrix adjust.
Identities = 197/323 (60%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+I+P +R LQ +R L+E+++DLGRLPEAR+ +YL VS ++L Y+
Sbjct: 10 LLEIVPDKIRRPLQEHQERNHLIEIVMDLGRLPEARFPSHV--EYLAEIPVSRKDLSYSM 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+G F DNRAGIE TLHRISA+R+R G ++GLTCRVGRAV G I M+ +L+ G+SIL
Sbjct: 68 ERIGTFSSDNRAGIEQTLHRISAMRNRTGEVIGLTCRVGRAVFGTIAMIRELVETGRSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGD+PHSAIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDVPHSAIGRARRMQVASPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KNP L
Sbjct: 188 QQHRVMIEAVENHTPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLVKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
SDLIGG+ VTLGD+EAR R QK++LERKAPPTF +EM ERH WV H + +VD L
Sbjct: 248 SDLIGGIQAVTLGDDEARRRSSQKTVLERKAPPTFEIAVEMLERHRWVVHEQVADTVDAL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRGK P E+R DD V + R
Sbjct: 308 LRGKKPNPEVRTMDDNGEVKIKR 330
>gi|284929559|ref|YP_003422081.1| hypothetical protein UCYN_10250 [cyanobacterium UCYN-A]
gi|284810003|gb|ADB95700.1| uncharacterized conserved protein [cyanobacterium UCYN-A]
Length = 590
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 247/331 (74%), Gaps = 3/331 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+LP ++ ++N S+ L+EV++DLGRLPEAR+ E+ YL +T +S +LE
Sbjct: 19 LNQLLDVLPPNICHYIKNHSECNHLIEVVMDLGRLPEARF-PEYS-VYLGATLISATDLE 76
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y +G F DNRAGIE TLHRISAIR+RKG+I+GLTCRVGRAV G I ++ DL+ GK
Sbjct: 77 YTIQKIGAFSSDNRAGIEKTLHRISAIRNRKGSIIGLTCRVGRAVFGTISIIKDLIETGK 136
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GD D+PHS+IG ARRMQV
Sbjct: 137 SILLLGRPGVGKTTALREIARVLADDFHKRVVIIDTSNEIAGDSDVPHSSIGRARRMQVS 196
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KN
Sbjct: 197 APELQHRVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNEIENLMKN 256
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ +VTLGDEEA+ R CQK++LERKAPPTF IE+ ER W H+ ++
Sbjct: 257 PTLSDLVGGIQSVTLGDEEAKRRGCQKTVLERKAPPTFEIAIEILERQKWNIHQDVACAI 316
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWKTYD 333
D LLR + P EIR V +D K+ D
Sbjct: 317 DSLLRNRKPNTEIRTVSQNGEVSIDHQKSND 347
>gi|427417957|ref|ZP_18908140.1| hypothetical protein Lepto7375DRAFT_3694 [Leptolyngbya sp. PCC
7375]
gi|425760670|gb|EKV01523.1| hypothetical protein Lepto7375DRAFT_3694 [Leptolyngbya sp. PCC
7375]
Length = 594
Score = 401 bits (1031), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/311 (64%), Positives = 237/311 (76%), Gaps = 3/311 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP LR L N +R QL+EVILDLGR PEAR+ G+ YL +S E+L++
Sbjct: 31 LLSILPEGLRAPLSNHPQRSQLIEVILDLGRRPEARFPGK--ADYLSEQVISKEDLQHCI 88
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISA+R+R G I+GLTCRVGRAV G ++M+ DL+ G+SIL
Sbjct: 89 ERVGAFGGDNRAGIEKTLHRISAMRNRAGTIIGLTCRVGRAVFGTVEMIRDLVEAGQSIL 148
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 149 LLGRPGVGKTTALREIARVLADDLDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 208
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENH PEVII+DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP L
Sbjct: 209 QQHQVMIEAVENHTPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKNPTL 268
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
+DLIGG+ TVTLGD+EAR R QKS+LERKAPPTF IEM ER WV H+ +VD L
Sbjct: 269 ADLIGGIQTVTLGDDEARRRGSQKSVLERKAPPTFDMAIEMLERQRWVVHEDVAATVDHL 328
Query: 306 LRGKTPLVEIR 316
LRG+ ++R
Sbjct: 329 LRGRMSETQVR 339
>gi|409992005|ref|ZP_11275221.1| single-stranded nucleic acid binding R3H [Arthrospira platensis
str. Paraca]
gi|291568683|dbj|BAI90955.1| Ycf45 protein [Arthrospira platensis NIES-39]
gi|409937126|gb|EKN78574.1| single-stranded nucleic acid binding R3H [Arthrospira platensis
str. Paraca]
Length = 592
Score = 401 bits (1030), Expect = e-109, Method: Compositional matrix adjust.
Identities = 201/328 (61%), Positives = 247/328 (75%), Gaps = 5/328 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
I+P +R L N +R L+E+++DLGRLPEAR+ +YL V+ ++L +
Sbjct: 10 LLDIVPPTVRKNLINHPERECLIEIVMDLGRLPEARF--PSNAEYLSQQPVTWDDLSHCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S +GEF GDNRAGIE TLHRISAIR+R G ++GLTCRVGRAV G I M+ DL+ G SIL
Sbjct: 68 SRIGEFSGDNRAGIEKTLHRISAIRNRTGKVIGLTCRVGRAVFGKIGMIRDLVETGGSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVASPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+I+ERGV LIGTAHG +EN++KNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTISERGVQLIGTAHGNRIENLMKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
+DLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H++ +VD L
Sbjct: 248 ADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERERWVVHESVSTTVDGL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVV--DRWKT 331
LRG P +++R+ +DR V V +R+ T
Sbjct: 308 LRGMQPTLQVRQMNDRGEVTVTQERYST 335
>gi|443327493|ref|ZP_21056117.1| hypothetical protein Xen7305DRAFT_00020990 [Xenococcus sp. PCC
7305]
gi|442792922|gb|ELS02385.1| hypothetical protein Xen7305DRAFT_00020990 [Xenococcus sp. PCC
7305]
Length = 584
Score = 400 bits (1029), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/318 (62%), Positives = 245/318 (77%), Gaps = 3/318 (0%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
I P+ +RD+++ ++ L+EV++DLGRLPEAR+ E YL +S E+L+Y+ V
Sbjct: 23 IFPTVIRDKIEAHPQKDNLIEVVMDLGRLPEARFRNEVC--YLGEKPISKEDLQYSIERV 80
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G FGGDNRAGIE TLHRISA+R+R G I+GLTCR+GRAV G I M+ DL+ G SIL +G
Sbjct: 81 GIFGGDNRAGIERTLHRISAMRNRAGDIIGLTCRIGRAVFGTIVMIRDLIETGGSILLLG 140
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH
Sbjct: 141 RPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQH 200
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP LSDL
Sbjct: 201 QVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNALENLIKNPTLSDL 260
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 308
+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER W+ H+ T +++D LLRG
Sbjct: 261 VGGIQAVTLGDDEARRRGSQKTVLERKAPPTFAIAVEMLERQKWIVHEDTAQTIDSLLRG 320
Query: 309 KTPLVEIRKRDDRFNVVV 326
P +IR DD V +
Sbjct: 321 IEPGSQIRTVDDSGEVSI 338
>gi|209525857|ref|ZP_03274392.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira maxima CS-328]
gi|376002076|ref|ZP_09779925.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|423062006|ref|ZP_17050796.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira platensis C1]
gi|209493666|gb|EDZ93986.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira maxima CS-328]
gi|375329564|emb|CCE15678.1| conserved hypothetical protein [Arthrospira sp. PCC 8005]
gi|406716579|gb|EKD11728.1| single-stranded nucleic acid binding R3H domain protein
[Arthrospira platensis C1]
Length = 592
Score = 400 bits (1028), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/328 (61%), Positives = 247/328 (75%), Gaps = 5/328 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
I+P +R L N +R L+E+++DLGRLPEAR+ +YL V+ ++L +
Sbjct: 10 LLDIVPPTVRKNLINHPERECLIEIVMDLGRLPEARF--PSNAEYLSQQPVTWDDLGHCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S +GEF GDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G SIL
Sbjct: 68 SRIGEFSGDNRAGIEKTLHRISAIRNRTGKIIGLTCRVGRAVFGKIGMIRDLVETGGSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVASPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+I+ERGV LIGTAHG +EN++KNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTISERGVQLIGTAHGNRIENLMKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
+DLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H++ +VD L
Sbjct: 248 ADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERERWVVHESVSTTVDGL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVV--DRWKT 331
LRG P +++R+ +DR V V +R+ T
Sbjct: 308 LRGMQPTLQVRQMNDRGEVTVTQERYST 335
>gi|428218066|ref|YP_007102531.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena sp. PCC 7367]
gi|427989848|gb|AFY70103.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena sp. PCC 7367]
Length = 623
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 199/315 (63%), Positives = 240/315 (76%), Gaps = 3/315 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP +R+ L+ + L+EV+LDLGR PEARY YL T V+ +++
Sbjct: 16 LLAILPPHIRENLEQKKQIDDLVEVVLDLGRPPEARYTS--AAVYLSDTPVTQADIDACV 73
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VGEFGGDNRAGIE TLHRISAIR+R+G ++GLTCRVGRAV G +M+ DL+ GKSIL
Sbjct: 74 DRVGEFGGDNRAGIERTLHRISAIRNRRGKVIGLTCRVGRAVYGTSEMIRDLVETGKSIL 133
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPG+GKTT +RE+ARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV +P
Sbjct: 134 IMGRPGMGKTTALREVARVLADEMDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAKPE 193
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VM+EAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG L N+IKNP L
Sbjct: 194 LQHQVMVEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNKLANLIKNPTL 253
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDLIGG+ +VTLGD+EAR R QKSILERKAPPTF IEM ER+ W H+ ++D L
Sbjct: 254 SDLIGGIQSVTLGDDEARRRGTQKSILERKAPPTFEIAIEMGERYRWAVHEDVTSTIDGL 313
Query: 306 LRGKTPLVEIRKRDD 320
LRG+ P ++IR D+
Sbjct: 314 LRGREPALQIRALDE 328
>gi|218441457|ref|YP_002379786.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. PCC 7424]
gi|218174185|gb|ACK72918.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7424]
Length = 605
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 245/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP + ++ R QL+EV++DLGRLPEAR+ G L +T VS E+L+
Sbjct: 38 LNQLLDILPPQIHSIIEQHPNRNQLVEVVMDLGRLPEARF--SQGAIDLGNTPVSKEDLQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRA+ G I M+ DL+ G+
Sbjct: 96 HCINRVGSFSGDNRAGIERTLHRISAIRNRTGEIIGLTCRIGRAIFGTIAMIEDLVETGQ 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+D++ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SILMLGRPGVGKTTALREIARVLADDYNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG ++N+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIDNLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF +EM ER WV H+ ++V
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHEDVAETV 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ P+++IR D+ V +
Sbjct: 336 DNLLRGREPILQIRTVDENGEVQI 359
>gi|298491066|ref|YP_003721243.1| single-stranded nucleic acid-binding R3H domain-containing protein
['Nostoc azollae' 0708]
gi|298232984|gb|ADI64120.1| single-stranded nucleic acid binding R3H domain protein ['Nostoc
azollae' 0708]
Length = 579
Score = 399 bits (1026), Expect = e-109, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L+N KR L+EV+LDLGR PEAR+ +YL T V+ +++
Sbjct: 10 LLDILPQDLRQELENHPKRDYLVEVVLDLGRRPEARF--PHAAEYLSETPVTQAQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 QRVGTFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G PGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDI HSAIG ARRMQV +P
Sbjct: 128 MLGCPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIAHSAIGRARRMQVAKPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMMERQRWVVHESVADTVDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ + R D+ V + R
Sbjct: 308 LRGRQANPQTRSMDENGKVAITR 330
>gi|11465747|ref|NP_053891.1| hypothetical protein PopuCp096 [Porphyra purpurea]
gi|1723347|sp|P51281.1|YCF45_PORPU RecName: Full=Uncharacterized protein ycf45; AltName: Full=ORF565
gi|1276747|gb|AAC08167.1| trnS (chloroplast) [Porphyra purpurea]
Length = 565
Score = 399 bits (1025), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 248/326 (76%), Gaps = 3/326 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP +R+ L+ S R L+EV++DLGR PEAR+ G +YL +S ++L+Y
Sbjct: 10 LLEILPHFVREPLKQHSNRKNLIEVVMDLGRRPEARFPG--NPEYLSQRSISWQDLDYCV 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F GDNRAGIE TLHRIS++R+R+G+I+GLTCRVGRAV G I ++ DLL G SIL
Sbjct: 68 KKVGNFSGDNRAGIEKTLHRISSMRNREGSIIGLTCRVGRAVFGTISIIRDLLEQGDSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G+PGVGKTT +REIARVLSDE +KRVVI+DTSNEI GDGDIPH AIG ARRMQV +P
Sbjct: 128 LLGKPGVGKTTAVREIARVLSDEMEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVAQPD 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +LE++IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNYLESLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
+DLIGG+ VTLGD+EA+ R QKSILERKA P F IE+ +R W+ H K E+++D +
Sbjct: 248 ADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKAWIVHEKVEETIDQI 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKT 331
L+G P V+ R+ D +++ + +
Sbjct: 308 LQGHQPFVQKRQIQDNGRILIKCYPS 333
>gi|443310712|ref|ZP_21040354.1| hypothetical protein Syn7509DRAFT_00032120 [Synechocystis sp. PCC
7509]
gi|442779237|gb|ELR89488.1| hypothetical protein Syn7509DRAFT_00032120 [Synechocystis sp. PCC
7509]
Length = 576
Score = 399 bits (1024), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/308 (64%), Positives = 236/308 (76%), Gaps = 3/308 (0%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
ILP +++ L R L+EV++DLGRLPEAR+ +YL VS E+L V
Sbjct: 13 ILPIEIQQALDQHELRDSLVEVVMDLGRLPEARFPNR--AEYLSQVPVSQEQLNDCIERV 70
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G IDM+ DL+ G+SIL +G
Sbjct: 71 GHFGGDNRAGIERTLHRISAIRNRTGKIIGLTCRVGRAVFGTIDMIRDLVGTGQSILMLG 130
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDI H AIG ARRMQV P LQH
Sbjct: 131 RPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDITHPAIGRARRMQVSRPELQH 190
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
+VMIEAVENHMPE I++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP LSDL
Sbjct: 191 QVMIEAVENHMPEAIVIDEIGTELEAMAARTIAERGVQLVGTAHGNQIENLIKNPTLSDL 250
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 308
+GG+ VTLGDEEAR RR QK++LERKAPPTF +EM+ER WV H++ +VD LLRG
Sbjct: 251 VGGIQAVTLGDEEARRRRSQKTVLERKAPPTFEIAVEMQERQRWVIHESVADTVDNLLRG 310
Query: 309 KTPLVEIR 316
K P ++R
Sbjct: 311 KPPTPQVR 318
>gi|172037264|ref|YP_001803765.1| hypothetical protein cce_2349 [Cyanothece sp. ATCC 51142]
gi|354553853|ref|ZP_08973159.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. ATCC 51472]
gi|171698718|gb|ACB51699.1| unknown [Cyanothece sp. ATCC 51142]
gi|353554570|gb|EHC23960.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. ATCC 51472]
Length = 604
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 199/324 (61%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILPS +R+++++ +L+EV++DLGRLPEAR+ GE YL VS +L+
Sbjct: 35 LSKLLDILPSSIRNQIKDHPNCDRLVEVVMDLGRLPEARFPGE--AIYLGENPVSASDLQ 92
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ VG F GDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G+
Sbjct: 93 YSIQRVGIFSGDNRAGIERTLHRISAIRNRTGDIIGLTCRVGRAVFGTISMIRDLVETGQ 152
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 153 SLLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 212
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQHKVMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KN
Sbjct: 213 TPELQHKVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLMKN 272
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 273 PTLSDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKWVVHEDVAYTI 332
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D+LLR P + R D+ V +
Sbjct: 333 DILLRNGEPNPQTRTVDENGEVQI 356
>gi|378787319|gb|AFC39950.1| hypothetical protein [Porphyra umbilicalis]
Length = 565
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/332 (59%), Positives = 249/332 (75%), Gaps = 6/332 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP+ +R+ L+ S R L+EV++DLGR PEAR+ G +YL +S ++L+Y
Sbjct: 10 LLEILPNFVREPLKQHSNRKNLIEVVMDLGRRPEARFPG--NPEYLSQRSISWQDLDYCV 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F GDNRAGIE TLHRIS++R+R+G+I+GLTCRVGRAV G I ++ DLL G SIL
Sbjct: 68 KKVGNFSGDNRAGIEKTLHRISSMRNREGSIIGLTCRVGRAVFGTISIIRDLLEQGDSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G+PGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 128 LLGKPGVGKTTAVREIARVLADEMEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPD 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG LE++IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHLESLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
+DLIGG+ VTLGD+EA+ R QKSILERKA P F IE+ +R W+ H K E+++D +
Sbjct: 248 ADLIGGIQYVTLGDDEAKRRGTQKSILERKAAPAFQIAIEIHDRKVWIVHDKVEQTIDQI 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
L+G P V+ R+ D +++ K Y H I
Sbjct: 308 LQGHQPFVQKRQIQDNGRILI---KCYPSHSI 336
>gi|37523337|ref|NP_926714.1| hypothetical protein gvip509 [Gloeobacter violaceus PCC 7421]
gi|35214341|dbj|BAC91709.1| ycf45 [Gloeobacter violaceus PCC 7421]
Length = 535
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/323 (63%), Positives = 243/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP L++RL + +L+EV+LDLGR PEAR+ G YL V+ +EL+
Sbjct: 10 LLAILPVPLQERLHAHERLDELVEVVLDLGRRPEARF--REGSDYLSEIPVTQDELDGCT 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ VGEF GDNRAGIE TLHRISA+R+R G I+GLTCRVGRAV G I M+ DL+ G+SIL
Sbjct: 68 ARVGEFSGDNRAGIERTLHRISAMRNRHGKIIGLTCRVGRAVFGTIGMIRDLVESGRSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 128 LLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG L+N+IKNP L
Sbjct: 188 YQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNKLDNLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDLIGG+ TVTLGDEEAR R QKS+LERKAPPTF +EM+ER+ W+ HK ++VD L
Sbjct: 248 SDLIGGIQTVTLGDEEARRRGTQKSVLERKAPPTFEIAVEMQERYKWIVHKDVAETVDYL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LR + PL E R + V V R
Sbjct: 308 LRDRKPLPETRALNGAGKVSVTR 330
>gi|218246053|ref|YP_002371424.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 8801]
gi|257059102|ref|YP_003136990.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanothece sp. PCC 8802]
gi|218166531|gb|ACK65268.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 8801]
gi|256589268|gb|ACV00155.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 8802]
Length = 602
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/314 (62%), Positives = 240/314 (76%), Gaps = 3/314 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
G ILP ++R+ ++ ++ QL+EV++DLGRLPEAR+ E YL T +S E+L+
Sbjct: 38 IGKLLAILPVNIREHIETHPQKDQLIEVVMDLGRLPEARFPNE--SVYLGETPISEEDLQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRA+ G I M+ DL+ GK
Sbjct: 96 HCIDRVGHFSGDNRAGIERTLHRISAIRNRTGKIIGLTCRMGRAIFGTITMIQDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KN
Sbjct: 216 SPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLLKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ +V
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVVHEDVSHTV 335
Query: 303 DMLLRGKTPLVEIR 316
D+LLR P ++R
Sbjct: 336 DILLRNGEPNPQLR 349
>gi|56750908|ref|YP_171609.1| hypothetical protein syc0899_c [Synechococcus elongatus PCC 6301]
gi|56685867|dbj|BAD79089.1| hypothetical protein YCF45 [Synechococcus elongatus PCC 6301]
Length = 588
Score = 398 bits (1022), Expect = e-108, Method: Compositional matrix adjust.
Identities = 195/311 (62%), Positives = 241/311 (77%), Gaps = 3/311 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP LRD+L ++ +L+EV+LDLGR PEAR+ G +YL T VS E+L Y
Sbjct: 29 LLEILPPQLRDQLLRHPQKDRLVEVVLDLGRFPEARF--PEGAEYLSETPVSREDLAYCA 86
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ VG+FG DNRAGIE TLHRI AIR+RKG ++GLTCRVGRAV G + M+ DL+ G+S+L
Sbjct: 87 ARVGDFGADNRAGIERTLHRIGAIRNRKGEVIGLTCRVGRAVFGTVGMIRDLVETGQSLL 146
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
F+GRP VGKTT +RE+ARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARR+QV P
Sbjct: 147 FLGRPDVGKTTALREVARVLADDLLKRVVIIDTSNEIAGDGDIPHPAIGRARRLQVARPE 206
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 207 LQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 266
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER+ WV H+ +V +L
Sbjct: 267 SDLVGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERYRWVVHEDVANTVGLL 326
Query: 306 LRGKTPLVEIR 316
LR P ++R
Sbjct: 327 LRQGQPNPQVR 337
>gi|434386487|ref|YP_007097098.1| hypothetical protein Cha6605_2518 [Chamaesiphon minutus PCC 6605]
gi|428017477|gb|AFY93571.1| hypothetical protein Cha6605_2518 [Chamaesiphon minutus PCC 6605]
Length = 588
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/326 (60%), Positives = 241/326 (73%), Gaps = 3/326 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+LP +R L+N K L+EV++DLGR PEAR+ G +YL V+ +++
Sbjct: 16 LSQLLAVLPESIRIALENHPKLSVLIEVVMDLGRYPEARFAD--GAEYLSDVAVTRADIQ 73
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ +G F GDNRAGIE TLHRIS +R+R I+GLTCRVGRAV G I+M+ DL+ GK
Sbjct: 74 HCVDRLGLFSGDNRAGIERTLHRISCMRNRTDEIIGLTCRVGRAVYGTINMIRDLVETGK 133
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPHSAIG ARRMQV
Sbjct: 134 SILMLGRPGVGKTTALREIARVLADELGKRVVIIDTSNEIAGDGDIPHSAIGRARRMQVA 193
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN++KN
Sbjct: 194 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLLKN 253
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSV 302
P LSDLIGG+ VTLGDEEAR R QK++LERKAPPTF +EM ERH WV H + + V
Sbjct: 254 PTLSDLIGGIQAVTLGDEEARRRSSQKTVLERKAPPTFEIAVEMHERHRWVVHDSVSEMV 313
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDR 328
D LLRG+ P ++R ++ V + R
Sbjct: 314 DTLLRGRQPTTQVRTVNEAGKVSIVR 339
>gi|354567011|ref|ZP_08986181.1| single-stranded nucleic acid binding R3H domain-containing protein
[Fischerella sp. JSC-11]
gi|353543312|gb|EHC12770.1| single-stranded nucleic acid binding R3H domain-containing protein
[Fischerella sp. JSC-11]
Length = 577
Score = 397 bits (1021), Expect = e-108, Method: Compositional matrix adjust.
Identities = 201/323 (62%), Positives = 240/323 (74%), Gaps = 3/323 (0%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
ILP DLR L+ +R L+EV+LDLGR PEAR+ + +YL V+ ++ V
Sbjct: 13 ILPQDLRQILEKHPQRDSLVEVVLDLGRRPEARFPDQ--AEYLSEIPVTQNVIDDCIQRV 70
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL +G
Sbjct: 71 GNFGGDNRAGIEQTLHRISAIRNRNGKIIGLTCRVGRAVFGTIGMIRDLVETGKSILMLG 130
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH AIG ARRMQV P LQH
Sbjct: 131 RPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVPHPAIGKARRMQVAHPELQH 190
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
+VMIEAVENHMPEVI++DEIGT EA A R+IAERGV L+GTAHG +EN+IKNP LSDL
Sbjct: 191 QVMIEAVENHMPEVIVIDEIGTALEALAARTIAERGVQLVGTAHGNQIENLIKNPTLSDL 250
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 308
+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD LLRG
Sbjct: 251 VGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVSDTVDSLLRG 310
Query: 309 KTPLVEIRKRDDRFNVVVDRWKT 331
P ++R D+ V + R T
Sbjct: 311 HQPSPQVRTVDESGKVKITRQLT 333
>gi|307155037|ref|YP_003890421.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 7822]
gi|306985265|gb|ADN17146.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7822]
Length = 605
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/329 (59%), Positives = 247/329 (75%), Gaps = 3/329 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP +R+ ++ K L+EV++DLGRLPEAR+ L +T VS E+L+
Sbjct: 38 LNQLLAILPPQIREIIEQHPKHSHLVEVVMDLGRLPEARFADV--AIDLGNTPVSKEDLQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRA+ G I M+ DL+ G+
Sbjct: 96 HCIHRVGSFSGDNRAGIERTLHRISAIRNRTGEIIGLTCRIGRAIFGTISMIEDLVETGQ 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+D++ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SILMLGRPGVGKTTALREIARVLADDYNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF +EM ER WV H+ ++V
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFQIAVEMLERQRWVVHEDVAETV 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWKT 331
D LLRG+ P++++R D+ V + + ++
Sbjct: 336 DNLLRGREPVLQVRTVDEHGEVKITQEES 364
>gi|427719465|ref|YP_007067459.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 7507]
gi|427351901|gb|AFY34625.1| single-stranded nucleic acid binding R3H domain-containing protein
[Calothrix sp. PCC 7507]
Length = 578
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 204/323 (63%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP LR L+N KR L+EV+LDLGR PEAR+ + +YL T V+ E+++
Sbjct: 10 LLDILPQGLRQVLENHPKRDILVEVVLDLGRRPEARFPHQ--AEYLSETPVTQEQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 ERVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+ H AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADELNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPD 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 QQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
+DL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 ADLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDNL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R DD V V R
Sbjct: 308 LRGRQPNPQTRTVDDEGKVSVAR 330
>gi|434403513|ref|YP_007146398.1| hypothetical protein Cylst_1432 [Cylindrospermum stagnale PCC 7417]
gi|428257768|gb|AFZ23718.1| hypothetical protein Cylst_1432 [Cylindrospermum stagnale PCC 7417]
Length = 578
Score = 397 bits (1020), Expect = e-108, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DLR L+N KR L+EV+LDLGR PEAR+ + +YL T V+ E+++
Sbjct: 10 LLDILPQDLRHVLENHPKRDILVEVVLDLGRRPEARFPQQ--AEYLSETPVTQEQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 QRVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+ H AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPD 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 QQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
DL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 CDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDNL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R D++ V + R
Sbjct: 308 LRGRQPSPQTRTVDEQGKVAITR 330
>gi|428224232|ref|YP_007108329.1| single-stranded nucleic acid binding R3H domain-containing protein
[Geitlerinema sp. PCC 7407]
gi|427984133|gb|AFY65277.1| single-stranded nucleic acid binding R3H domain-containing protein
[Geitlerinema sp. PCC 7407]
Length = 605
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 196/323 (60%), Positives = 245/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP +L+ RL +R +L+EV+LDLGR PEAR+ G+ +YL VS+E++++
Sbjct: 40 LLAILPVELQQRLDQHPQRDKLVEVVLDLGRRPEARFPGK--AEYLSDLPVSLEDIDHCL 97
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ + F GDNRAGIE TLHRISAIR+R G ++GLTCRVGRA+ G I M+ DL+ G+SIL
Sbjct: 98 ARISSFSGDNRAGIERTLHRISAIRNRSGDVIGLTCRVGRAIFGTIGMIRDLVETGQSIL 157
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 158 LLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 217
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG + N+IKNP L
Sbjct: 218 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIANLIKNPTL 277
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER WV H+ +VD L
Sbjct: 278 SDLVGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERERWVVHENVADTVDQL 337
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P +IR + V + R
Sbjct: 338 LRGRQPNPQIRTVSEGGKVTITR 360
>gi|166367800|ref|YP_001660073.1| hypothetical protein MAE_50590 [Microcystis aeruginosa NIES-843]
gi|166090173|dbj|BAG04881.1| hypothetical protein MAE_50590 [Microcystis aeruginosa NIES-843]
Length = 603
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKVQV 359
>gi|220906040|ref|YP_002481351.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Cyanothece sp. PCC 7425]
gi|219862651|gb|ACL42990.1| single-stranded nucleic acid binding R3H domain protein [Cyanothece
sp. PCC 7425]
Length = 584
Score = 396 bits (1018), Expect = e-108, Method: Compositional matrix adjust.
Identities = 200/313 (63%), Positives = 241/313 (76%), Gaps = 3/313 (0%)
Query: 15 LRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGG 74
R L + +R QL+EV++DLGR PEAR+ GE +YL + +S +L+Y VG F G
Sbjct: 27 FRLPLSHHPRRDQLIEVVMDLGRQPEARFPGE--AEYLSTDLISQADLDYCVQRVGRFSG 84
Query: 75 DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVG 134
DNRAGIE TLHRISA+R+R+G IVGLTCRVGRAV G I M+ DL+ GKSIL +GRPGVG
Sbjct: 85 DNRAGIEYTLHRISALRNRQGDIVGLTCRVGRAVFGTIGMIRDLVESGKSILLLGRPGVG 144
Query: 135 KTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIE 194
KTT +RE+ARVL+DE KRVVI+DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIE
Sbjct: 145 KTTALREMARVLADELLKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIE 204
Query: 195 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVD 254
AVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG +EN+IKNP LSDL+GG+
Sbjct: 205 AVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGNRIENLIKNPTLSDLVGGIQ 264
Query: 255 TVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLV 313
+VTLGDEEAR R QKS+LERKAPPTF +E+ ER WV H + ++VD LLRG+ P
Sbjct: 265 SVTLGDEEARRRGSQKSVLERKAPPTFEIAVELLERERWVVHEQVAETVDHLLRGRIPTP 324
Query: 314 EIRKRDDRFNVVV 326
+IR + V++
Sbjct: 325 QIRTLSETGKVII 337
>gi|425459771|ref|ZP_18839257.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
gi|389827687|emb|CCI20874.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9808]
Length = 603
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425464557|ref|ZP_18843867.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
gi|389833423|emb|CCI22104.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9809]
Length = 581
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 16 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 73
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 74 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 133
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 134 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 193
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 194 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 253
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 254 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVIHEDVSTTI 313
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 314 DQLLRGREAIAQIRWVDEEGKVQV 337
>gi|428222285|ref|YP_007106455.1| hypothetical protein Syn7502_02321 [Synechococcus sp. PCC 7502]
gi|427995625|gb|AFY74320.1| hypothetical protein Syn7502_02321 [Synechococcus sp. PCC 7502]
Length = 588
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 197/314 (62%), Positives = 237/314 (75%), Gaps = 3/314 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP ++ ++ + QL+EV++DLGR PEARY E +YL +S +L
Sbjct: 16 LLEILPISIKTSIEEYGQLDQLVEVVMDLGRSPEARYFNE--TRYLSEIPISQADLNSCI 73
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VGEF GDNRAGIE TLHRISA+R+RKG IVGLTCR+GRA+ G M+ D + GKSIL
Sbjct: 74 EKVGEFSGDNRAGIERTLHRISAMRNRKGVIVGLTCRIGRAIYGTSAMIRDFVETGKSIL 133
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPG+GKTT +REIARVL+DE KRVVI+DTSNEI GDGDIPH AIG +RRMQV P
Sbjct: 134 LLGRPGMGKTTALREIARVLADEINKRVVIIDTSNEIAGDGDIPHPAIGRSRRMQVATPE 193
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG L N+IKNP L
Sbjct: 194 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGNQLANLIKNPTL 253
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ +VTLGDEEAR R QKSILERKAPPTF IEM ER+ W+ HK +++D L
Sbjct: 254 SDLVGGIQSVTLGDEEARRRGTQKSILERKAPPTFDIAIEMTERYKWIVHKDVAETIDGL 313
Query: 306 LRGKTPLVEIRKRD 319
LRG+ P ++R D
Sbjct: 314 LRGREPAFQVRAVD 327
>gi|425443006|ref|ZP_18823238.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
gi|389715784|emb|CCH99888.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9717]
Length = 603
Score = 396 bits (1017), Expect = e-108, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKVQV 359
>gi|422305000|ref|ZP_16392337.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
gi|389789775|emb|CCI14286.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9806]
Length = 603
Score = 396 bits (1017), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISQEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKVQV 359
>gi|425455395|ref|ZP_18835115.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
gi|389803727|emb|CCI17377.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9807]
Length = 603
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPVRIRSKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKVQV 359
>gi|390442301|ref|ZP_10230310.1| conserved hypothetical protein [Microcystis sp. T1-4]
gi|389834387|emb|CCI34436.1| conserved hypothetical protein [Microcystis sp. T1-4]
Length = 581
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 16 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 73
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 74 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 133
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 134 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 193
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 194 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 253
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 254 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 313
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 314 DQLLRGREAIAQIRWVDEEGKVQV 337
>gi|425449052|ref|ZP_18828896.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
gi|389765138|emb|CCI08948.1| conserved hypothetical protein [Microcystis aeruginosa PCC 7941]
Length = 603
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVS 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFEIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ + V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKIQV 359
>gi|87124959|ref|ZP_01080806.1| hypothetical protein RS9917_03118 [Synechococcus sp. RS9917]
gi|86167279|gb|EAQ68539.1| hypothetical protein RS9917_03118 [Synechococcus sp. RS9917]
Length = 547
Score = 395 bits (1016), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/304 (63%), Positives = 238/304 (78%), Gaps = 9/304 (2%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE---FGGKYLRSTEVSVEELEYAQSA 68
P+D+ + LQ +++R QLLEV+LDLGR+PEARY G G + L + E+L+
Sbjct: 18 PADVGEALQPEARRDQLLEVVLDLGRVPEARYPGRSLALGERCL-----TREDLQSTVER 72
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
+G+FG DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + +V DLL G+S+L +
Sbjct: 73 LGQFGADNRAGIERTLHRISAIRNRRGDVVGLTCRVGRAVFGTVALVRDLLDSGQSLLLM 132
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
GRPGVGKTT +REIARVL+DE +KRVV++DTSNEI GDGDIPH AIG ARRMQV P LQ
Sbjct: 133 GRPGVGKTTALREIARVLADELEKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQ 192
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
H+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP L D
Sbjct: 193 HQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALANLIKNPTLCD 252
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLR 307
L+GG+++VTLGDEEAR RR QK++LER A PTF +EM RH W H ++VD+LLR
Sbjct: 253 LVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPLAVEMHSRHRWAVHADVGRTVDLLLR 312
Query: 308 GKTP 311
G+TP
Sbjct: 313 GQTP 316
>gi|428314326|ref|YP_007125303.1| hypothetical protein Mic7113_6310 [Microcoleus sp. PCC 7113]
gi|428255938|gb|AFZ21897.1| hypothetical protein Mic7113_6310 [Microcoleus sp. PCC 7113]
Length = 611
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/323 (60%), Positives = 242/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP ++R L+ ++ +L+EV++DLGR PE R+ G +YL T ++ E++ +
Sbjct: 48 LLDILPEEIRSVLEQHPQQDRLIEVVMDLGRFPEVRF--PQGAEYLLETPITQEQINHCV 105
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F GDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G+SIL
Sbjct: 106 QRVGHFSGDNRAGIERTLHRISAIRNRPGEIIGLTCRVGRAVFGTIGMIRDLVETGQSIL 165
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 166 MLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 225
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 226 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLIKNPTL 285
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H++ +VD L
Sbjct: 286 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVVHESVSDTVDDL 345
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P ++R + V + R
Sbjct: 346 LRGRQPNPQVRTAHENGKVTITR 368
>gi|425472177|ref|ZP_18851028.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
gi|389881819|emb|CCI37683.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9701]
Length = 581
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 16 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 73
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 74 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 133
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 134 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 193
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 194 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 253
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 254 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 313
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 314 DQLLRGREAIAQIRWVDEEGKVQV 337
>gi|425438133|ref|ZP_18818542.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
gi|389676734|emb|CCH94266.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9432]
Length = 603
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVS 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ + V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKIQV 359
>gi|159026253|emb|CAO86402.1| unnamed protein product [Microcystis aeruginosa PCC 7806]
Length = 603
Score = 395 bits (1015), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVS 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ + V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKIQV 359
>gi|440754058|ref|ZP_20933260.1| R3H domain protein [Microcystis aeruginosa TAIHU98]
gi|440174264|gb|ELP53633.1| R3H domain protein [Microcystis aeruginosa TAIHU98]
Length = 572
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 7 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 64
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 65 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 124
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 125 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVS 184
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 185 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 244
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 245 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 304
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 305 DQLLRGREAIAQIRWVDEEGKVQV 328
>gi|425447044|ref|ZP_18827039.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
gi|389732499|emb|CCI03582.1| conserved hypothetical protein [Microcystis aeruginosa PCC 9443]
Length = 603
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 243/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 38 LNKLLAILPVRIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 95
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 96 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 155
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 156 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 215
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 216 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 275
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 276 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 335
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ V V
Sbjct: 336 DQLLRGREAIAQIRWVDEEGKVQV 359
>gi|428205270|ref|YP_007089623.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
gi|428007191|gb|AFY85754.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chroococcidiopsis thermalis PCC 7203]
Length = 587
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/323 (60%), Positives = 244/323 (75%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP D+++ L+ +R L+EV++DLGR PEAR+ +YL + +S +++ Y+
Sbjct: 10 LLDILPLDIKNVLEQHPQRDSLIEVVMDLGRRPEARFPDR--AEYLAESGISHDQIRYSI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAG+ TLHRISAIR+R G I+GLTCRVGRAV G I M++DL+ G+SIL
Sbjct: 68 QRVGHFGGDNRAGLAQTLHRISAIRNRAGDIIGLTCRVGRAVFGTIGMIHDLVETGQSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+PH AIG ARRMQV P
Sbjct: 128 LLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVSRPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 FQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
SDL+GG+ +VTLGD+EAR RR QK++LERKAPPTF +EM ER W H++ +VD L
Sbjct: 248 SDLVGGIQSVTLGDDEARRRRTQKTVLERKAPPTFEIAVEMLERQRWTIHESVADTVDAL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P ++R D V + R
Sbjct: 308 LRGRIPNPQLRTVDADGKVTIVR 330
>gi|428774384|ref|YP_007166172.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium stanieri PCC 7202]
gi|428688663|gb|AFZ48523.1| single-stranded nucleic acid binding R3H domain-containing protein
[Cyanobacterium stanieri PCC 7202]
Length = 580
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/323 (60%), Positives = 247/323 (76%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP ++++ + + + L+E++LDLGR PEAR++ + YL VS E+LE+
Sbjct: 19 LLHILPLNIQNAIASHPDKKSLIEIVLDLGRKPEARFVDQTC--YLSEEVVSREDLEHCT 76
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ VG F DNRAGIEGTLHRISAIR+R+ I+GLTCR+GRAV G I M+ +L+ G+SIL
Sbjct: 77 ARVGHFSADNRAGIEGTLHRISAIRNRQEKIIGLTCRIGRAVFGTILMIRELVESGQSIL 136
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE +KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 137 LLGRPGVGKTTALREIARVLADELEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 196
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP L
Sbjct: 197 LQHQVMIEAVENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNHLENLIKNPTL 256
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
SDLIGG+ +VTLGD+EAR R QK++LERKAPPTF +EM ER WV H + ++VD +
Sbjct: 257 SDLIGGIQSVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMWERQKWVVHEEVAQTVDNI 316
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ + ++R+ DD V + R
Sbjct: 317 LRGRQIIPQLRQVDDEGKVSITR 339
>gi|318042567|ref|ZP_07974523.1| ATPase [Synechococcus sp. CB0101]
Length = 556
Score = 395 bits (1014), Expect = e-107, Method: Compositional matrix adjust.
Identities = 196/314 (62%), Positives = 237/314 (75%), Gaps = 3/314 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
++LP +R L R QLLEV+LDLGR+PEARY G G L V +L
Sbjct: 18 LLEVLPEAVRQALAPPEAREQLLEVVLDLGRVPEARYPGRAVG--LGDAVVERADLAAVV 75
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+G FGGDNRAGIE TLHRISAIR+R G IVGLTCRVGRAV G + MV DL+ G+S+L
Sbjct: 76 EQLGAFGGDNRAGIERTLHRISAIRNRTGTIVGLTCRVGRAVFGTVAMVRDLMDSGQSLL 135
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVV++DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 136 LMGRPGVGKTTALREIARVLADELGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPE 195
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N++KNP L
Sbjct: 196 LQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNELANLVKNPTL 255
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+++VTLGDEEAR RR QK++LER A PTF +EM R+ W+ H+ ++VD+L
Sbjct: 256 SDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPLAVEMHTRNRWLVHRDVARTVDLL 315
Query: 306 LRGKTPLVEIRKRD 319
LRG+ P ++R+ D
Sbjct: 316 LRGQLPRPQVRELD 329
>gi|443669237|ref|ZP_21134472.1| R3H domain protein [Microcystis aeruginosa DIANCHI905]
gi|443330479|gb|ELS45192.1| R3H domain protein [Microcystis aeruginosa DIANCHI905]
Length = 572
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 244/324 (75%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R +++ ++ QL+EV++DLGR+PEAR+ G L +S EE++
Sbjct: 7 LNKLLAILPARIRGKIEEHPRQHQLIEVVMDLGRIPEARFPD--GAIDLGDEPISKEEIQ 64
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ + VG F GDNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I ++ DL+ GK
Sbjct: 65 YSIARVGSFSGDNRAGIERTLHRISAIRNRDGEIIGLTCRIGRAVFGTITLINDLVETGK 124
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 125 SLLLLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVS 184
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKN
Sbjct: 185 RPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLENLIKN 244
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 245 PTLSDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFDIAIEMLERQRWVIHEDVSTTI 304
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG+ + +IR D+ + V
Sbjct: 305 DQLLRGREAIAQIRWVDEEGKIQV 328
>gi|414079590|ref|YP_007001014.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena sp. 90]
gi|413972869|gb|AFW96957.1| single-stranded nucleic acid binding R3H domain-containing protein
[Anabaena sp. 90]
Length = 583
Score = 394 bits (1013), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/323 (61%), Positives = 240/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DL+ +L++ L+EV+LDLGR PEAR+ +YL T V+ +++
Sbjct: 10 LLDILPQDLQQKLEHHPNGDNLVEVVLDLGRRPEARF--PHVAEYLSETPVTQAQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ G+SIL
Sbjct: 68 QRVGNFGGDNRAGIEQTLHRISAIRNRSGKIIGLTCRVGRAVFGTIAMIRDLVETGQSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+ H AIG ARRMQV +P
Sbjct: 128 MLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVSKPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H+ +VD L
Sbjct: 248 SDLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHECVADTVDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P + R DD V V R
Sbjct: 308 LRGRQPTPQTRTVDDNGKVGVVR 330
>gi|186685424|ref|YP_001868620.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nostoc punctiforme PCC 73102]
gi|186467876|gb|ACC83677.1| single-stranded nucleic acid binding R3H domain protein [Nostoc
punctiforme PCC 73102]
Length = 577
Score = 394 bits (1012), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/323 (61%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP DL+ L++ KR L+EV+LDLGR PEAR+ + +YL V+ E+++
Sbjct: 10 LLDILPQDLQQVLESHPKRDSLVEVVLDLGRRPEARFPNQ--AEYLSEIPVTQEQIDDCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISAIR+R G I+GLTCRVGRAV G I M+ DL+ GKSIL
Sbjct: 68 QRVGIFGGDNRAGIEQTLHRISAIRNRTGKIIGLTCRVGRAVFGTIGMIRDLVETGKSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGD+ H AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDVAHPAIGRARRMQVAHPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 188 QQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLIKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
+DL+GG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H++ +VD L
Sbjct: 248 ADLVGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVVHESVADTVDNL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ + R DD+ V V R
Sbjct: 308 LRGRQATPQTRTVDDQGKVAVTR 330
>gi|428776905|ref|YP_007168692.1| single-stranded nucleic acid binding R3H domain-containing protein
[Halothece sp. PCC 7418]
gi|428691184|gb|AFZ44478.1| single-stranded nucleic acid binding R3H domain-containing protein
[Halothece sp. PCC 7418]
Length = 599
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 195/324 (60%), Positives = 242/324 (74%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A LP ++ L + +RG+L+EV++DLGR PEAR+ + +YL V+ ++L+
Sbjct: 39 LDALLATLPPEIASHLTDHEQRGELIEVVIDLGRKPEARFANHW--EYLSEATVTRDDLQ 96
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ VG F GDNRAGIE TLHRISA+R+R G IVGLTCR+GRAV G I M+ DL+ G+
Sbjct: 97 FCSDRVGMFSGDNRAGIERTLHRISAMRNRTGEIVGLTCRIGRAVYGTIGMIRDLVETGR 156
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH +IG ARRMQV
Sbjct: 157 SILMLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPSIGRARRMQVA 216
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG L+N+IKN
Sbjct: 217 SPELQHQVMIEAVENHMPEVIVIDEIGTELEALATRTIAERGVQLVGTAHGNQLDNLIKN 276
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ VTLGDEEAR R QK++LERKA PTF +EM ER WV H+ ++
Sbjct: 277 PTLSDLIGGIQAVTLGDEEARRRGSQKTVLERKALPTFDIAVEMLERRRWVVHQDVSVTI 336
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D LLRG PL E+R +++ V +
Sbjct: 337 DQLLRGHDPLTEVRSANEQGEVEI 360
>gi|67922837|ref|ZP_00516336.1| Single-stranded nucleic acid binding R3H [Crocosphaera watsonii WH
8501]
gi|67855330|gb|EAM50590.1| Single-stranded nucleic acid binding R3H [Crocosphaera watsonii WH
8501]
Length = 604
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILPS + L+ +L+EV++DLGR+PEAR+ GE YL VS +LE
Sbjct: 35 LSQLLDILPSSISHCLKEHPNCDRLVEVVMDLGRVPEARFPGE--SIYLGDVPVSAADLE 92
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ VG F GDNRAGIE TLHRISA+R+R G I+GLTCRVGRAV G I M+ DL+ G+
Sbjct: 93 YSIQRVGIFSGDNRAGIERTLHRISAMRNRGGDIIGLTCRVGRAVFGTISMIRDLVETGQ 152
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 153 SLLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 212
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQHK+MIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KN
Sbjct: 213 TPELQHKIMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLLKN 272
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 273 PTLSDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKWVIHEDVANTI 332
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D+LLR P ++R D++ V +
Sbjct: 333 DILLRSGHPKPQVRTVDEKGEVQI 356
>gi|427711502|ref|YP_007060126.1| hypothetical protein Syn6312_0350 [Synechococcus sp. PCC 6312]
gi|427375631|gb|AFY59583.1| hypothetical protein Syn6312_0350 [Synechococcus sp. PCC 6312]
Length = 571
Score = 393 bits (1010), Expect = e-107, Method: Compositional matrix adjust.
Identities = 199/321 (61%), Positives = 243/321 (75%), Gaps = 3/321 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP L+ L++ R LLE++LDLGR P+AR++ G + L T VS E+LEY
Sbjct: 18 LLDILPHYLQATLRDHIHREDLLEIVLDLGRPPQARFVK--GSEDLSQTPVSREDLEYCV 75
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG+F GDNRAGIE TLHRISAIR+R+G I+GLTCRVGRAV G I ++ DL+ +SIL
Sbjct: 76 QRVGQFSGDNRAGIERTLHRISAIRNRQGTIIGLTCRVGRAVFGTIGLIRDLVESEQSIL 135
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +RE+ARVL+D+ KRVVI+DTSNEI GDGDIPH A+G ARRMQV P
Sbjct: 136 LLGRPGVGKTTALREMARVLADDLHKRVVIIDTSNEIAGDGDIPHPALGRARRMQVARPE 195
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV LIGTAHG LEN+IKNP L
Sbjct: 196 LQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLIGTAHGNRLENLIKNPTL 255
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
+DL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER WV H ++VD L
Sbjct: 256 ADLVGGIQSVTLGDDEARRRGTQKSVLERKAPPTFPIAVEMLERERWVVHDNVAETVDQL 315
Query: 306 LRGKTPLVEIRKRDDRFNVVV 326
LRG TP + R ++ VV+
Sbjct: 316 LRGHTPNPQTRSVNENGEVVI 336
>gi|300863790|ref|ZP_07108717.1| single-stranded nucleic acid binding R3H [Oscillatoria sp. PCC
6506]
gi|300338218|emb|CBN53863.1| single-stranded nucleic acid binding R3H [Oscillatoria sp. PCC
6506]
Length = 586
Score = 393 bits (1009), Expect = e-107, Method: Compositional matrix adjust.
Identities = 194/326 (59%), Positives = 246/326 (75%), Gaps = 3/326 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
I+P ++R ++ +R +L+E+++DLGR PEAR+ + +YL T VS E L
Sbjct: 7 LNKLLDIVPEEIRRPIKQHPQRDRLIEIVMDLGRRPEARFPSK--AEYLSETLVSKESLN 64
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ VG+FGGDNRAGIE TLHRISAIR+R G ++GLT RVGRAV G I ++ DL+ G+
Sbjct: 65 HCIQRVGDFGGDNRAGIEQTLHRISAIRNRTGEVIGLTLRVGRAVFGTIGLIRDLVETGQ 124
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 125 SILLLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVS 184
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN++KN
Sbjct: 185 HPEFQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLVKN 244
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P L+DLIGG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H+ ++V
Sbjct: 245 PTLADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAVEMLERQRWVIHEHVSETV 304
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDR 328
D+LLRG+ P +++R D V+V +
Sbjct: 305 DILLRGRQPNLQVRSIGDSGEVIVSQ 330
>gi|428780211|ref|YP_007171997.1| hypothetical protein Dacsa_1993 [Dactylococcopsis salina PCC 8305]
gi|428694490|gb|AFZ50640.1| hypothetical protein Dacsa_1993 [Dactylococcopsis salina PCC 8305]
Length = 602
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 193/307 (62%), Positives = 236/307 (76%), Gaps = 3/307 (0%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVG 70
LP ++ L N +RG+L+EV++DLGR PEAR+ + +YLR V+ E++++ VG
Sbjct: 47 LPPEISSTLTNHPQRGELIEVVIDLGRKPEARFANNW--EYLREEPVTREDIQFCSDRVG 104
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGR 130
F GDNRAGIE TLHRISA+R+R G IVGLTCR+GRAV G I M+ DL+ G+SIL +GR
Sbjct: 105 MFSGDNRAGIERTLHRISAMRNRGGEIVGLTCRIGRAVYGTIGMIRDLVETGRSILMLGR 164
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH +IG ARRMQV P LQH+
Sbjct: 165 PGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPSIGRARRMQVSRPELQHQ 224
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG L+N+IKNP LSDLI
Sbjct: 225 VMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLDNLIKNPTLSDLI 284
Query: 251 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGK 309
GG+ VTLGDEEAR R QK++LERKA PTF +EM ER WV H+ +++D LRG
Sbjct: 285 GGIQAVTLGDEEARRRGSQKTVLERKALPTFDIAVEMLERRRWVVHQEVSETIDQFLRGH 344
Query: 310 TPLVEIR 316
P E+R
Sbjct: 345 DPATEVR 351
>gi|416393486|ref|ZP_11686016.1| hypothetical protein CWATWH0003_2819 [Crocosphaera watsonii WH
0003]
gi|357263482|gb|EHJ12485.1| hypothetical protein CWATWH0003_2819 [Crocosphaera watsonii WH
0003]
Length = 576
Score = 392 bits (1007), Expect = e-106, Method: Compositional matrix adjust.
Identities = 198/324 (61%), Positives = 241/324 (74%), Gaps = 3/324 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILPS + L+ +L+EV++DLGR+PEAR+ GE YL VS +LE
Sbjct: 7 LSQLLDILPSSISHCLKEHPNCDRLVEVVMDLGRVPEARFPGE--SIYLGDVPVSAADLE 64
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y+ VG F GDNRAGIE TLHRISA+R+R G I+GLTCRVGRAV G I M+ DL+ G+
Sbjct: 65 YSIQRVGIFSGDNRAGIERTLHRISAMRNRGGDIIGLTCRVGRAVFGTISMIRDLVETGQ 124
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+D+F KRVVI+DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 125 SLLLLGRPGVGKTTALREIARVLADDFDKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVA 184
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQHK+MIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KN
Sbjct: 185 TPELQHKIMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQIENLLKN 244
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H+ ++
Sbjct: 245 PTLSDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERQKWVIHEDVANTI 304
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D+LLR P ++R D++ V +
Sbjct: 305 DILLRSGHPNPQVRTVDEKGEVQI 328
>gi|359461140|ref|ZP_09249703.1| hypothetical protein ACCM5_20609 [Acaryochloris sp. CCMEE 5410]
Length = 577
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/311 (61%), Positives = 239/311 (76%), Gaps = 3/311 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP LR LQ+ +R ++EV++DLGR PEAR+ G+ +YL + +S ++L+Y
Sbjct: 19 LLDILPETLRSHLQHHPQRSVMIEVVMDLGRQPEARFPGQ--AEYLSTEPISRDDLDYCI 76
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
V F GDNRAGIE TLHRISA+R+R+G I+GLTCRVGRAV G +++ DL+ G+SIL
Sbjct: 77 QRVSHFSGDNRAGIERTLHRISAMRNRQGEIIGLTCRVGRAVLGTTEIIRDLVESGRSIL 136
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 137 MLGRPGVGKTTALREIARVLADDLLKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 196
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV LIGTAHG +EN++KNP L
Sbjct: 197 LQHQVMIEAVENHTPEVIVIDEIGTELEAAAARTIAERGVQLIGTAHGNRIENLLKNPTL 256
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
SDL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER W+ H + ++D L
Sbjct: 257 SDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERSRWIVHEEVANTIDNL 316
Query: 306 LRGKTPLVEIR 316
LRG+ P ++R
Sbjct: 317 LRGRMPNPQVR 327
>gi|158334816|ref|YP_001515988.1| hypothetical protein AM1_1653 [Acaryochloris marina MBIC11017]
gi|158305057|gb|ABW26674.1| conserved hypothetical protein [Acaryochloris marina MBIC11017]
Length = 577
Score = 392 bits (1006), Expect = e-106, Method: Compositional matrix adjust.
Identities = 191/311 (61%), Positives = 239/311 (76%), Gaps = 3/311 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP LR LQ+ +R ++EV++DLGR PEAR+ G+ +YL + +S ++L+Y
Sbjct: 19 LLDILPETLRSHLQHHPQRSVMIEVVMDLGRQPEARFPGQ--AEYLSTEPISRDDLDYCI 76
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
V F GDNRAGIE TLHRISA+R+R+G I+GLTCRVGRAV G +++ DL+ G+SIL
Sbjct: 77 QRVSHFSGDNRAGIERTLHRISAMRNRQGEIIGLTCRVGRAVLGTTEIIRDLVESGRSIL 136
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 137 MLGRPGVGKTTALREIARVLADDLLKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 196
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENH PEVI++DEIGTE EA A R+IAERGV LIGTAHG +EN++KNP L
Sbjct: 197 LQHQVMIEAVENHTPEVIVIDEIGTELEAAAARTIAERGVQLIGTAHGNRIENLLKNPTL 256
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
SDL+GG+ +VTLGD+EAR R QKS+LERKAPPTF +EM ER W+ H + ++D L
Sbjct: 257 SDLVGGIQSVTLGDDEARRRGSQKSVLERKAPPTFDIAVEMLERSRWIVHEEVANTIDNL 316
Query: 306 LRGKTPLVEIR 316
LRG+ P ++R
Sbjct: 317 LRGRMPNPQVR 327
>gi|148238773|ref|YP_001224160.1| ATPase [Synechococcus sp. WH 7803]
gi|147847312|emb|CAK22863.1| AAA ATPase superfamily protein with a possible REH domain
[Synechococcus sp. WH 7803]
Length = 545
Score = 391 bits (1005), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/306 (63%), Positives = 233/306 (76%), Gaps = 3/306 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+LP+ +R L+ + + QLLEV+LDLGRLPEARY G R E S +LE
Sbjct: 13 LLSLLPTPVRKVLEQNEQSDQLLEVVLDLGRLPEARYPGRSQPLGDRCLERS--DLEEMV 70
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+G+FG DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + MV DLL +S+L
Sbjct: 71 DRLGQFGADNRAGIERTLHRISAIRNRRGDVVGLTCRVGRAVFGTVAMVRDLLDSEQSLL 130
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVV++DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 131 LMGRPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPE 190
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP L
Sbjct: 191 LQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALANLIKNPTL 250
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
DL+GG+++VTLGDEEAR RR QK++LER A PTF IEM RH W H ++VD+L
Sbjct: 251 CDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPIAIEMHSRHRWAVHDDVARTVDLL 310
Query: 306 LRGKTP 311
LRG+TP
Sbjct: 311 LRGQTP 316
>gi|434396885|ref|YP_007130889.1| single-stranded nucleic acid binding R3H domain-containing protein
[Stanieria cyanosphaera PCC 7437]
gi|428267982|gb|AFZ33923.1| single-stranded nucleic acid binding R3H domain-containing protein
[Stanieria cyanosphaera PCC 7437]
Length = 584
Score = 391 bits (1004), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/315 (61%), Positives = 236/315 (74%), Gaps = 3/315 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
I P +R +L ++ L+EV++DLGRLPE R+ E YL T VS E+L++
Sbjct: 20 LLSIFPEPIRLKLIEHPQKDNLIEVVMDLGRLPEGRFASE--ASYLGQTPVSKEDLQHCI 77
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F DNRAGIE TLHRISAIR+R G I+GLTCR+GRAV G I M+ +L+ G+S+L
Sbjct: 78 ERVGIFSSDNRAGIERTLHRISAIRNRAGDIIGLTCRIGRAVFGTIIMIRELIETGQSVL 137
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 138 LLGRPGVGKTTALREIARVLADDLNKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPE 197
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE E+ A R+IAERGV L+GTAHG +EN+IKNP L
Sbjct: 198 LQHQVMIEAVENHMPEVIVIDEIGTELESLAARTIAERGVQLVGTAHGNTIENLIKNPTL 257
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDLIGG+ VTLGD+EAR R QK++LERKAPPTF +EM ER WV H+ ++VD L
Sbjct: 258 SDLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFAVAVEMLERQRWVVHEDVAQTVDNL 317
Query: 306 LRGKTPLVEIRKRDD 320
LRG P +IR DD
Sbjct: 318 LRGIEPTTQIRTVDD 332
>gi|86610056|ref|YP_478818.1| R3H domain-containing protein [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558598|gb|ABD03555.1| R3H domain protein [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 639
Score = 390 bits (1001), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/326 (60%), Positives = 239/326 (73%), Gaps = 3/326 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP+ +R+RL+ +L+EV+LDLGR PEAR+ G YL ++ +L+
Sbjct: 37 LSKLLDILPAPIRERLEQHPHLDRLVEVVLDLGRRPEARFPG--FADYLLEDVITRADLD 94
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
S VGEF DNRAGI TLHRISAIR+R+G I+GLTCRVGR V G I M+ DL+ G+
Sbjct: 95 QVISRVGEFSSDNRAGIASTLHRISAIRNRQGTIIGLTCRVGRCVIGVISMIRDLVEQGR 154
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+DE KRVVI+DTSNEI GDGD+PH IG ARRMQV
Sbjct: 155 SMLLLGRPGVGKTTALREIARVLADELGKRVVIIDTSNEIAGDGDVPHPGIGRARRMQVA 214
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQHKVMIEAVENHMPEV+++DEIGTE EA A R+IAERGV L+ TAHG ++N+IKN
Sbjct: 215 SPELQHKVMIEAVENHMPEVVVIDEIGTELEALASRTIAERGVQLVATAHGNRIDNLIKN 274
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GG+ +VTLGDEEAR R QKS+LERKAPPTF IEM ER WV H+ +V
Sbjct: 275 PTLSDLVGGIQSVTLGDEEARRRGSQKSVLERKAPPTFEIAIEMLERSRWVIHEDVAATV 334
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDR 328
D LLR + PL + R D+ VV+ R
Sbjct: 335 DRLLRNREPLTQTRSLDEHGQVVIVR 360
>gi|78211931|ref|YP_380710.1| ATPase [Synechococcus sp. CC9605]
gi|78196390|gb|ABB34155.1| ATPase [Synechococcus sp. CC9605]
Length = 546
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 195/307 (63%), Positives = 234/307 (76%), Gaps = 3/307 (0%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE 71
P +R++L+ R QLLEV+LDLGR+PEARY G L ST +S E+L + +G+
Sbjct: 18 PEAVREQLRPVEARQQLLEVVLDLGRVPEARYPGR--ALALGSTPLSREDLAVVVARLGQ 75
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRP 131
FGGDNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + MV DLL G+S+L +GRP
Sbjct: 76 FGGDNRAGIERTLHRISAIRNRQGDVVGLTCRVGRAVFGTVAMVRDLLDGGQSLLLMGRP 135
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 191
GVGKTT +REIARVL+DE ++RVV++DTSNEI GDGDIPH AIG ARRMQV P LQH+
Sbjct: 136 GVGKTTALREIARVLADELERRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQT 195
Query: 192 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
MIEAVENHMPEVI++DEIGTE EA A R+IAERGV+L+ TAHG L N+IKNP LSDL+G
Sbjct: 196 MIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVVLVATAHGNALANLIKNPTLSDLVG 255
Query: 252 GVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKT 310
G+ VTLGDEEAR RR QK++LER A PTF +EM R W H +VD LLRG
Sbjct: 256 GIQAVTLGDEEARRRRSQKTVLERAAEPTFPVAVEMHSRQRWAVHTDVAATVDQLLRGLK 315
Query: 311 PLVEIRK 317
P V+ R+
Sbjct: 316 PRVQERE 322
>gi|428316917|ref|YP_007114799.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillatoria nigro-viridis PCC 7112]
gi|428240597|gb|AFZ06383.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillatoria nigro-viridis PCC 7112]
Length = 588
Score = 389 bits (998), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/323 (59%), Positives = 241/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
I+P ++R L+ +R L+E+++DLGR PEAR+ + L T VS +L Y
Sbjct: 10 LLDIVPDEIRQPLEQHPQRNNLIEIVMDLGRQPEARFPSL--AEPLSQTPVSKADLNYCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISA+R+R G I+GLT RVGRAV G I ++ DL+ G+SIL
Sbjct: 68 ERVGHFGGDNRAGIEQTLHRISALRNRSGEIIGLTLRVGRAVFGTIGIIRDLVETGQSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN++KNP L
Sbjct: 188 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLMKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
+DLIGG+ VTLGD+EAR R QK++LERK+PPTF +EM ER WV H + S+D L
Sbjct: 248 ADLIGGIQAVTLGDDEARRRGSQKTVLERKSPPTFEIAVEMLERQRWVIHERVADSIDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P +IR + V++++
Sbjct: 308 LRGREPNQQIRSVSETGEVIIEQ 330
>gi|16329574|ref|NP_440302.1| hypothetical protein slr0692 [Synechocystis sp. PCC 6803]
gi|383321315|ref|YP_005382168.1| hypothetical protein SYNGTI_0406 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|383324485|ref|YP_005385338.1| hypothetical protein SYNPCCP_0406 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|383490369|ref|YP_005408045.1| hypothetical protein SYNPCCN_0406 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|384435635|ref|YP_005650359.1| hypothetical protein SYNGTS_0406 [Synechocystis sp. PCC 6803]
gi|451813733|ref|YP_007450185.1| YCF45 protein [Synechocystis sp. PCC 6803]
gi|1652057|dbj|BAA16982.1| ycf45 [Synechocystis sp. PCC 6803]
gi|339272667|dbj|BAK49154.1| hypothetical protein SYNGTS_0406 [Synechocystis sp. PCC 6803]
gi|359270634|dbj|BAL28153.1| hypothetical protein SYNGTI_0406 [Synechocystis sp. PCC 6803
substr. GT-I]
gi|359273805|dbj|BAL31323.1| hypothetical protein SYNPCCN_0406 [Synechocystis sp. PCC 6803
substr. PCC-N]
gi|359276975|dbj|BAL34492.1| hypothetical protein SYNPCCP_0406 [Synechocystis sp. PCC 6803
substr. PCC-P]
gi|407957455|dbj|BAM50695.1| hypothetical protein BEST7613_1764 [Synechocystis sp. PCC 6803]
gi|451779702|gb|AGF50671.1| YCF45 protein [Synechocystis sp. PCC 6803]
Length = 589
Score = 388 bits (996), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/311 (62%), Positives = 235/311 (75%), Gaps = 3/311 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
ILP ++ + +R QL+EV++DLGRLPEAR+ G YL ++ E+L+YA
Sbjct: 19 LLSILPKPIQAIIAEHPQRQQLVEVVMDLGRLPEARFPG--TAVYLGHEPIAKEDLQYAI 76
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F DNRAGIE TLHRISAIR+R I+GLTCRVGRAV G I+++ DL+ G+S+L
Sbjct: 77 DRVGLFSSDNRAGIERTLHRISAIRNRTNEIIGLTCRVGRAVFGTINLIQDLVETGESLL 136
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 137 LLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVARPE 196
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP L
Sbjct: 197 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLIKNPTL 256
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ VTLGDEEAR R QK++LERKAPPTF +EM ER W H ++D L
Sbjct: 257 SDLVGGIQAVTLGDEEARRRGSQKTVLERKAPPTFSMAVEMLERQKWTIHSDVALTIDNL 316
Query: 306 LRGKTPLVEIR 316
LRG+ P+ ++R
Sbjct: 317 LRGRPPVEQLR 327
>gi|334116745|ref|ZP_08490837.1| single-stranded nucleic acid binding R3H domain-containing protein
[Microcoleus vaginatus FGP-2]
gi|333461565|gb|EGK90170.1| single-stranded nucleic acid binding R3H domain-containing protein
[Microcoleus vaginatus FGP-2]
Length = 588
Score = 387 bits (995), Expect = e-105, Method: Compositional matrix adjust.
Identities = 193/323 (59%), Positives = 240/323 (74%), Gaps = 3/323 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
I+P ++R L+ +R L+E+++DLGR PEAR+ + L T VS L Y
Sbjct: 10 LLDIVPDEIRQPLEQHPQRNNLIEIVMDLGRRPEARFPSL--AEPLSQTPVSKAHLNYCI 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FGGDNRAGIE TLHRISA+R+R G I+GLT RVGRAV G I ++ DL+ G+SIL
Sbjct: 68 QRVGHFGGDNRAGIEQTLHRISALRNRSGEIIGLTLRVGRAVFGTIGIIRDLVETGQSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ +KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 128 MLGRPGVGKTTALREIARVLADDLEKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAHG +EN++KNP L
Sbjct: 188 LQHQVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRIENLMKNPTL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
+DLIGG+ VTLGD+EAR R QK++LERKAPPTF IEM ER WV H + ++D L
Sbjct: 248 ADLIGGIQAVTLGDDEARRRGSQKTVLERKAPPTFEIAIEMLERERWVIHERVADAIDTL 307
Query: 306 LRGKTPLVEIRKRDDRFNVVVDR 328
LRG+ P +IR + V+++R
Sbjct: 308 LRGREPHQQIRSVSESGEVIIER 330
>gi|221632236|ref|YP_002521457.1| ATPase-like protein [Thermomicrobium roseum DSM 5159]
gi|221156979|gb|ACM06106.1| ATPase-like protein [Thermomicrobium roseum DSM 5159]
Length = 562
Score = 387 bits (994), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/317 (62%), Positives = 242/317 (76%), Gaps = 6/317 (1%)
Query: 7 FWQILPSDLRDRLQ---NDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+LP D+ + L+ + R +LLE++LDLGR PEAR+ E YL E++ E++
Sbjct: 13 LLAVLPPDIVEALREYNSPEDRAKLLEIVLDLGRRPEARF--EDREVYLADREITREDIA 70
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y S +G FG DNRAGIE TLHRISAIRSR G IVGLTCR+GRAV G + ++ DL+ G+
Sbjct: 71 YVASRIGRFGDDNRAGIERTLHRISAIRSRSGEIVGLTCRIGRAVYGTVAIIRDLIESGE 130
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT++RE ARVL+D+ +KRV++VDTSNEI GDGDIPH AIG ARRMQVP
Sbjct: 131 SILLLGRPGVGKTTMLRETARVLADDLRKRVIVVDTSNEIAGDGDIPHPAIGRARRMQVP 190
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
PSLQH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG LENI+ N
Sbjct: 191 TPSLQHAVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLIGTAHGNTLENIMMN 250
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTL DEEAR R QKSILERKAPPTF L+E++ R+ H+ +V
Sbjct: 251 PTLSDLIGGIQSVTLSDEEARRRGTQKSILERKAPPTFGVLVEIQSRNRVAVHRDVAAAV 310
Query: 303 DMLLRGKTPLVEIRKRD 319
D +LRG+ VEIR+R+
Sbjct: 311 DAILRGQPLRVEIRERN 327
>gi|443321273|ref|ZP_21050332.1| hypothetical protein GLO73106DRAFT_00025300 [Gloeocapsa sp. PCC
73106]
gi|442789018|gb|ELR98692.1| hypothetical protein GLO73106DRAFT_00025300 [Gloeocapsa sp. PCC
73106]
Length = 571
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 191/332 (57%), Positives = 245/332 (73%), Gaps = 3/332 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP+ +R+ ++ ++ QL+EV++DLGR+PEAR+ G L ++ +L++
Sbjct: 19 LLEILPNSIRESIEQHPQKNQLVEVVMDLGRIPEARF--SDGTADLGDQPMTKADLDHCI 76
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG F GDNRAGIE TLHRISA+R+R G I+GLTCR+GRA+ G I M+ +L+ G+SIL
Sbjct: 77 QRVGHFSGDNRAGIERTLHRISAMRNRGGEIIGLTCRIGRAIFGTITMIRELVESGQSIL 136
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVVI+DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 137 LLGRPGVGKTTALREIARVLADDLHKRVVIIDTSNEIAGDGDIPHPAIGRARRMQVSRPE 196
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN+IKNP L
Sbjct: 197 LQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNRLENLIKNPTL 256
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ VTLGD+EAR R QK++LERKAPPTF IEM E+ WV H+ +++D L
Sbjct: 257 SDLVGGIQAVTLGDDEARRRNSQKTVLERKAPPTFAIAIEMLEKQRWVIHEDVAQTIDAL 316
Query: 306 LRGKTPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
LRG +IR + + NV + Y + +
Sbjct: 317 LRGYATPQQIRTVNGQGNVEITEEPGYTTNQV 348
>gi|352096524|ref|ZP_08957351.1| single-stranded nucleic acid binding R3H domain-containing protein
[Synechococcus sp. WH 8016]
gi|351676174|gb|EHA59328.1| single-stranded nucleic acid binding R3H domain-containing protein
[Synechococcus sp. WH 8016]
Length = 543
Score = 387 bits (993), Expect = e-105, Method: Compositional matrix adjust.
Identities = 192/312 (61%), Positives = 237/312 (75%), Gaps = 3/312 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+LP++L+ L + R QLLEV+LDLGR+PEARY G G L ++ ++ +L+
Sbjct: 13 LVSLLPAELQASLASPESRDQLLEVVLDLGRVPEARYSG--GSTPLGTSTITRADLQAMV 70
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+G+FG DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + MV DLL+ G+S+L
Sbjct: 71 ERLGQFGSDNRAGIERTLHRISAIRNRRGEVVGLTCRVGRAVFGTVAMVRDLLYSGESLL 130
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVLSD+ KRVV++DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 131 LMGRPGVGKTTALREIARVLSDDLGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPE 190
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+ TAHG L N+IKNP L
Sbjct: 191 LQHHVMIEAVENHMPEVIVIDEIGTELEARAARTIAERGVTLVATAHGNALSNLIKNPTL 250
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
DLIGG+++VTLGD+EAR RR QK++LER A PTF +E+ R +W ++ ++VD L
Sbjct: 251 CDLIGGIESVTLGDDEARRRRSQKTVLERAAEPTFSMAVEIHSRSHWAVYREVGRAVDAL 310
Query: 306 LRGKTPLVEIRK 317
LRG P E RK
Sbjct: 311 LRGHVPSPEERK 322
>gi|113954993|ref|YP_729670.1| R3H domain-containing protein [Synechococcus sp. CC9311]
gi|113882344|gb|ABI47302.1| R3H domain protein [Synechococcus sp. CC9311]
Length = 548
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 194/309 (62%), Positives = 236/309 (76%), Gaps = 3/309 (0%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
+LP++L+ L + R QLLEV+LDLGR+PEARY G L ST V+ +L+ +
Sbjct: 16 LLPAELQSSLASTESRDQLLEVVLDLGRVPEARYSG--WSTALGSTSVTHADLQAMVERL 73
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G+FG DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + MV DLL G+S+L +G
Sbjct: 74 GQFGSDNRAGIERTLHRISAIRNRRGEVVGLTCRVGRAVFGTVAMVRDLLDSGESLLLMG 133
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT +REIARVL+D+ KRVV++DTSNEI GDGDIPH AIG ARRMQV P LQH
Sbjct: 134 RPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQH 193
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+ TAHG L N+IKNP L DL
Sbjct: 194 QVMIEAVENHMPEVIVIDEIGTELEARAARTIAERGVTLVATAHGNALSNLIKNPTLCDL 253
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 308
IGG+++VTLGD+EAR RR QK++LER A PTF +EM R W ++ ++VD LLRG
Sbjct: 254 IGGIESVTLGDDEARRRRSQKTVLERAAEPTFSMAVEMHSRSRWAVYREVGRAVDALLRG 313
Query: 309 KTPLVEIRK 317
+ P E RK
Sbjct: 314 QLPSPEERK 322
>gi|443474815|ref|ZP_21064783.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena biceps PCC 7429]
gi|443020404|gb|ELS34366.1| single-stranded nucleic acid binding R3H domain-containing protein
[Pseudanabaena biceps PCC 7429]
Length = 591
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 198/321 (61%), Positives = 237/321 (73%), Gaps = 4/321 (1%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEE 61
+ ILP +++ L+ QL+E+++DLGRLPEARY KYL ++ E+
Sbjct: 10 DNLDQLLDILPPRIKNSLELCGGLEQLVEIVMDLGRLPEARYFD--TTKYLTDDPITKED 67
Query: 62 LEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY 121
L VGEFGGDNRAGIE TLHRISAIR+RKG I+GLTCRVGRAV G I M+ DL+
Sbjct: 68 LAICVQQVGEFGGDNRAGIERTLHRISAIRNRKGEIIGLTCRVGRAVYGTIAMIRDLVET 127
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GKSIL +G+PG+GKTT +REIARVL+D+ KRVVI+D+SNEI GDGDIPH AIG ARRMQ
Sbjct: 128 GKSILLLGKPGMGKTTALREIARVLADDLNKRVVIIDSSNEIAGDGDIPHPAIGRARRMQ 187
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V +P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG L N+I
Sbjct: 188 VSQPELQHQVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLVGTAHGNQLANLI 247
Query: 242 KNPILSDLIGGVDTVTLGDEEARARRC-QKSILERKAPPTFYFLIEMRERHYWVTHK-TE 299
KNP LSDLIGG+ +VTLGDEE R R QKSILERKA PTF +EM ER+ W H
Sbjct: 248 KNPTLSDLIGGIQSVTLGDEEMRRRGLPQKSILERKAQPTFDIAVEMWERYRWAVHTDVA 307
Query: 300 KSVDMLLRGKTPLVEIRKRDD 320
++DMLLR + P +IR D
Sbjct: 308 GTIDMLLRDRDPGRQIRAVSD 328
>gi|260436547|ref|ZP_05790517.1| ATPase [Synechococcus sp. WH 8109]
gi|260414421|gb|EEX07717.1| ATPase [Synechococcus sp. WH 8109]
Length = 546
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 192/304 (63%), Positives = 233/304 (76%), Gaps = 3/304 (0%)
Query: 15 LRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGG 74
++++L+ + R QLLEV+LDLGR+PEARY L ST +S E+L + +G+FGG
Sbjct: 21 VQEQLRPEEAREQLLEVVLDLGRVPEARYPSR--ALALGSTPLSREDLTAVVARLGQFGG 78
Query: 75 DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVG 134
DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + MV DLL G+S+L +GRPGVG
Sbjct: 79 DNRAGIERTLHRISAIRNRQGEVVGLTCRVGRAVFGTVAMVRDLLDGGQSLLLMGRPGVG 138
Query: 135 KTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIE 194
KTT +REIARVL+DE ++RVV++DTSNEI GDGDIPH AIG ARRMQV P LQH+ MIE
Sbjct: 139 KTTALREIARVLADELERRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQTMIE 198
Query: 195 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVD 254
AVENHMPEVI++DEIGTE EA A R+IAERGV+L+ TAHG L N+IKNP LSDL+GG+
Sbjct: 199 AVENHMPEVIVIDEIGTELEAQAARTIAERGVVLVATAHGNALANLIKNPTLSDLVGGIQ 258
Query: 255 TVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLV 313
VTLGDEEAR RR QK++LER A PTF +EM R W H +VD LLRG P V
Sbjct: 259 AVTLGDEEARRRRSQKTVLERAAEPTFPVAVEMHSRQRWAVHTDVAATVDQLLRGLKPRV 318
Query: 314 EIRK 317
+ R+
Sbjct: 319 QERE 322
>gi|116075770|ref|ZP_01473029.1| hypothetical protein RS9916_39931 [Synechococcus sp. RS9916]
gi|116067085|gb|EAU72840.1| hypothetical protein RS9916_39931 [Synechococcus sp. RS9916]
Length = 560
Score = 385 bits (988), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/300 (64%), Positives = 230/300 (76%), Gaps = 3/300 (1%)
Query: 19 LQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRA 78
L+ S R QLLEV+LDLGR+PEARY G L +S EEL +G+FG DNRA
Sbjct: 27 LEPASSRDQLLEVVLDLGRVPEARYPGR--SMPLGDICLSREELLATVERLGQFGADNRA 84
Query: 79 GIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTV 138
GIE TLHRISAIR+R+G +VGLTCRVGRAV G + +V DLL G+S+L +GRPGVGKTT
Sbjct: 85 GIERTLHRISAIRNRRGDVVGLTCRVGRAVFGTVAIVRDLLDSGESLLLMGRPGVGKTTA 144
Query: 139 MREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVEN 198
+REIARVL+DE KRVV++DTSNEI GDGDIPH AIG ARRMQV P LQH+VMIEAVEN
Sbjct: 145 LREIARVLADELGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQHQVMIEAVEN 204
Query: 199 HMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 258
HMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP L DL+GG+++VTL
Sbjct: 205 HMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALANLIKNPTLCDLVGGIESVTL 264
Query: 259 GDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 317
GDEEAR RR QK++LER A PTF +EM +RH W H +VD+LLRG P ++R+
Sbjct: 265 GDEEARRRRSQKTVLERAAEPTFPLAVEMHQRHRWAVHPDVGATVDLLLRGHAPRAQLRE 324
>gi|317968814|ref|ZP_07970204.1| ATPase [Synechococcus sp. CB0205]
Length = 318
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 189/303 (62%), Positives = 230/303 (75%), Gaps = 3/303 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
++LP +R L + R QLLEV+LDLGR+PEARY G L + + +L
Sbjct: 18 LLEVLPEAVRSALGSAEAREQLLEVVLDLGRIPEARYPGR--AVPLGANPIERSDLAAVV 75
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+G FGGDNRAGIE TLHRISAIR+R G +VGLTCRVGRAV G + MV DL+ G+S+L
Sbjct: 76 EQLGTFGGDNRAGIERTLHRISAIRNRSGDVVGLTCRVGRAVFGTVAMVRDLMDSGQSLL 135
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+DE KRVV++DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 136 LMGRPGVGKTTALREIARVLADELDKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVTRPE 195
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPE+I++DEIGTE EA A R+IAERGVML+ TAHG L N++KNP L
Sbjct: 196 LQHQVMIEAVENHMPEIIVIDEIGTELEAQAARTIAERGVMLVATAHGNELANLVKNPTL 255
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+++VTLGDEEAR RR QK++LER A PTF +EM R W+ H+ ++VD+L
Sbjct: 256 SDLVGGIESVTLGDEEARRRRTQKTVLERAAEPTFPMAVEMHSRDRWLVHRDVARTVDLL 315
Query: 306 LRG 308
LRG
Sbjct: 316 LRG 318
>gi|254432798|ref|ZP_05046501.1| ATPase [Cyanobium sp. PCC 7001]
gi|197627251|gb|EDY39810.1| ATPase [Cyanobium sp. PCC 7001]
Length = 579
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 193/312 (61%), Positives = 232/312 (74%), Gaps = 3/312 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+LP+ ++ L + R LLEV+LDLGRLPEARY G L V +L+
Sbjct: 33 LLAVLPAPVQAALASAESRAHLLEVVLDLGRLPEARYPGR--AALLGDRPVERSDLDAVV 90
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+G FG DNRAGI TLHRISAIR+R G IVGLTCRVGRAV G + MV DLL G+S+L
Sbjct: 91 DQLGAFGADNRAGIACTLHRISAIRNRIGTIVGLTCRVGRAVFGTVVMVRDLLDSGQSLL 150
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ KRVV++DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 151 LMGRPGVGKTTALREIARVLADDLGKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVVRPD 210
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP L
Sbjct: 211 LQHEVMIEAVENHMPEVIVIDEIGTEREAQAARTIAERGVMLVATAHGNELTNLIKNPTL 270
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ +VTLGDEEAR RR QK++LER A PTF +EM RH W+ H+ ++VD L
Sbjct: 271 SDLVGGIQSVTLGDEEARRRRTQKTVLERAAEPTFPLAVEMHSRHRWLIHRDVAQTVDGL 330
Query: 306 LRGKTPLVEIRK 317
LRG+T ++R+
Sbjct: 331 LRGQTARPQVRE 342
>gi|270308090|ref|YP_003330148.1| R3H domain-containing protein [Dehalococcoides sp. VS]
gi|270153982|gb|ACZ61820.1| R3H domain protein [Dehalococcoides sp. VS]
Length = 537
Score = 384 bits (987), Expect = e-104, Method: Compositional matrix adjust.
Identities = 191/328 (58%), Positives = 247/328 (75%), Gaps = 3/328 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A ++LP ++R L N + R L+E+++DLGR PEAR+ L + +V+ E+++
Sbjct: 37 LNALLEVLPPNIRQPLTNPANRENLIEIVMDLGRNPEARFPDR--EIILSNRDVTQEDID 94
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y S +G+FG DNRAGIE TLHRISAIR+RKG IVGLT RVGRAV G I ++ DL+ G+
Sbjct: 95 YVSSRIGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIQSGQ 154
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH AIG ARRMQV
Sbjct: 155 SVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVR 214
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAHG L+N++ N
Sbjct: 215 TPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLN 274
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E++ER+ H +V
Sbjct: 275 PTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHPDVGAAV 334
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWK 330
D +LRG +P EIR D+ VV+ + +
Sbjct: 335 DSILRGVSPSSEIRYLDENGEVVISKQQ 362
>gi|33866596|ref|NP_898155.1| hypothetical protein SYNW2064 [Synechococcus sp. WH 8102]
gi|33633374|emb|CAE08579.1| conserved hypothetical protein [Synechococcus sp. WH 8102]
Length = 543
Score = 383 bits (983), Expect = e-104, Method: Compositional matrix adjust.
Identities = 190/312 (60%), Positives = 235/312 (75%), Gaps = 3/312 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+LP +RD L+ +R QLLEV+LDLGR+PEARY G+ L ++ ++L+
Sbjct: 13 LLALLPDPVRDALRPPERRDQLLEVVLDLGRVPEARYPGQ--ALALGEVALTRDDLDAMV 70
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ +G FG DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + +V DLL G+S+L
Sbjct: 71 ARLGCFGADNRAGIERTLHRISAIRNRRGDVVGLTCRVGRAVFGTVALVRDLLDGGQSLL 130
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ Q+RVV++DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 131 LMGRPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPE 190
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP L
Sbjct: 191 QQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALANLIKNPTL 250
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
SDL+GG+ +VTLGD+EAR RR QK++LER A PTF +EM R W H +VD L
Sbjct: 251 SDLVGGIQSVTLGDDEARRRRSQKTVLERAAEPTFPVAVEMHSRQRWAVHTDVASTVDQL 310
Query: 306 LRGKTPLVEIRK 317
LRG P ++ R+
Sbjct: 311 LRGLPPRIQERE 322
>gi|57234427|ref|YP_181509.1| R3H domain-containing protein [Dehalococcoides ethenogenes 195]
gi|57224875|gb|AAW39932.1| R3H domain protein [Dehalococcoides ethenogenes 195]
Length = 509
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/328 (57%), Positives = 244/328 (74%), Gaps = 3/328 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A ++LP +R N + R L+E+++DLGR PEAR+ L +V+ E+++
Sbjct: 9 LNALLEVLPPHVRQPFANPADRENLIEIVMDLGRTPEARFPDR--EIILSERDVTQEDID 66
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y S +G+FG DNRAGIE TLHRISAIR+RKG IVGLT RVGRAV G I ++ DL+ G+
Sbjct: 67 YVSSRIGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIQSGQ 126
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH AIG ARRMQV
Sbjct: 127 SVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVR 186
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAHG L+N++ N
Sbjct: 187 TPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLN 246
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E++ER+ H +V
Sbjct: 247 PTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQERNKVAVHPDVGAAV 306
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWK 330
D +LRG +P EIR D+ VV+ + +
Sbjct: 307 DSILRGVSPSSEIRYLDENGEVVISKQQ 334
>gi|374853797|dbj|BAL56696.1| single-stranded nucleic acid binding R3H [uncultured gamma
proteobacterium]
Length = 501
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 193/304 (63%), Positives = 231/304 (75%), Gaps = 4/304 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
Q LP LRDRL + LLE++LDLGR P+ARY L T V+ +L Y
Sbjct: 13 LLQTLPGSLRDRLA-ELPNEDLLEIVLDLGRPPQARYADR--SLLLAETPVTRADLNYVV 69
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VGEFG DNRAGIEGTLHRISAIR+RKG IVGLT RVGRAV+G ID++ DL+ G+S+L
Sbjct: 70 DWVGEFGADNRAGIEGTLHRISAIRNRKGEIVGLTLRVGRAVTGTIDLIRDLIESGRSLL 129
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +RE+ARVL+D+F KRV+++DTSNEIGGDGD+PH AIG+ARRMQVP P
Sbjct: 130 LLGRPGVGKTTKLREVARVLADDFGKRVIVIDTSNEIGGDGDVPHPAIGSARRMQVPHPD 189
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH VMIEAVENHMPEVI++DEIGT AEA A R+IAERGV LIGTAHG L N+++NP L
Sbjct: 190 KQHAVMIEAVENHMPEVIVIDEIGTAAEALAARTIAERGVQLIGTAHGNTLANLVQNPTL 249
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
DL+GGV TVTLGDEEAR R QK++ ERKAPPTF ++E+ R + H T +VD L
Sbjct: 250 CDLVGGVQTVTLGDEEARFRGTQKTVSERKAPPTFEQVVELVSRDELIVHLDTAAAVDAL 309
Query: 306 LRGK 309
LRG+
Sbjct: 310 LRGE 313
>gi|159897031|ref|YP_001543278.1| single-stranded nucleic acid binding R3H domain-containing protein
[Herpetosiphon aurantiacus DSM 785]
gi|159890070|gb|ABX03150.1| single-stranded nucleic acid binding R3H domain protein
[Herpetosiphon aurantiacus DSM 785]
Length = 565
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 189/324 (58%), Positives = 241/324 (74%), Gaps = 8/324 (2%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
LP L + L ++ Q++E+++DLGRLPEAR+ + +L TEVS E+L+Y
Sbjct: 14 LLSTLPPRLAEPLATHEQKDQVIEIVMDLGRLPEARFRHD-QSSFLSETEVSREDLDYVT 72
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+G+FG DNRAGI+ TLHRISAIR+R G ++GLTCRVGRAV G I++V DL+ GKSIL
Sbjct: 73 ERIGQFGEDNRAGIQRTLHRISAIRNRSGVVIGLTCRVGRAVYGTIEIVRDLVEAGKSIL 132
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G+PG GKTT++RE+ARVL+D+F KRVVIVDTSNEI GDGDIPH IG ARRMQV P+
Sbjct: 133 ILGKPGTGKTTMLREVARVLADDFLKRVVIVDTSNEIAGDGDIPHPGIGRARRMQVARPA 192
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAHG LEN++ NP L
Sbjct: 193 EQHNVMIEAVENHMPQVIVIDEIGTELEAQAARTIAERGVQLVGTAHGNTLENLMLNPTL 252
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW----VTHKTEKSV 302
SDLIGG+ VTLGDEEAR R QK++LERKAPPTF L+E++ W + + +V
Sbjct: 253 SDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDVLVEIQS---WDDVTIYQEVASAV 309
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVV 326
D +L+G P E R +D++ +VV
Sbjct: 310 DSILQGNEPTAEQRTKDEQGEIVV 333
>gi|116072568|ref|ZP_01469834.1| ATPase [Synechococcus sp. BL107]
gi|116064455|gb|EAU70215.1| ATPase [Synechococcus sp. BL107]
Length = 550
Score = 381 bits (978), Expect = e-103, Method: Compositional matrix adjust.
Identities = 191/307 (62%), Positives = 229/307 (74%), Gaps = 3/307 (0%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE 71
P ++ L ++ QLLEV+LDLGR+PEARY G L ++ ++L +G
Sbjct: 18 PQSVQFALSLEASHDQLLEVVLDLGRIPEARYPGRVSA--LGDRAITRDDLAVVVDKLGR 75
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRP 131
FG DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + MV DLL KS+L +GRP
Sbjct: 76 FGADNRAGIERTLHRISAIRNRQGEVVGLTCRVGRAVFGTVAMVRDLLDSAKSLLLMGRP 135
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 191
GVGKTT +REIARVL+DE Q+RVV++DTSNEI GDGDIPH AIG ARRMQV P QH+V
Sbjct: 136 GVGKTTALREIARVLADEMQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVSSPERQHQV 195
Query: 192 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
MIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP LSDL+G
Sbjct: 196 MIEAVENHMPEVIVIDEIGTELEAMAARTIAERGVMLVATAHGNALANLIKNPTLSDLVG 255
Query: 252 GVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKT 310
G+ +VTLGD+EAR RR QK++LER A PTF +EM RH W H +VD LLRG+
Sbjct: 256 GIQSVTLGDDEARRRRTQKTVLERAAEPTFPLAVEMHSRHRWSIHADVAATVDQLLRGQK 315
Query: 311 PLVEIRK 317
P VE R+
Sbjct: 316 PRVEQRE 322
>gi|219849802|ref|YP_002464235.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus aggregans DSM 9485]
gi|219544061|gb|ACL25799.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus aggregans DSM 9485]
Length = 540
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/320 (59%), Positives = 235/320 (73%), Gaps = 3/320 (0%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVE 60
+N LP +RD +Q + + LLE+++DLGRLPEARY G +L EV+ E
Sbjct: 7 VNDIQLLLATLPPAIRDAIQKANDQDNLLEIVMDLGRLPEARYRGH--ELFLSDREVTAE 64
Query: 61 ELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH 120
++ Y + +GEFG DNRAGI TLHRIS IR+R+G ++GLTCRVGRAV G +D++ DL+
Sbjct: 65 DINYVIARIGEFGEDNRAGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVDIIRDLVE 124
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 180
G+SIL +G+PG GKTT++RE ARVL DE +KRVVIVDTSNEI GDGDIPH IG ARRM
Sbjct: 125 TGQSILLLGKPGTGKTTLLRETARVLGDELRKRVVIVDTSNEIAGDGDIPHPGIGRARRM 184
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
QVP PS QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG L+N+
Sbjct: 185 QVPRPSEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLIGTAHGNTLDNL 244
Query: 241 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRE-RHYWVTHKTE 299
+ NP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF L+E++ V
Sbjct: 245 MINPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDSVTVYPDVA 304
Query: 300 KSVDMLLRGKTPLVEIRKRD 319
+VD +LRG+ P E R R+
Sbjct: 305 AAVDAILRGEEPPCEQRIRE 324
>gi|427703065|ref|YP_007046287.1| hypothetical protein Cyagr_1807 [Cyanobium gracile PCC 6307]
gi|427346233|gb|AFY28946.1| hypothetical protein Cyagr_1807 [Cyanobium gracile PCC 6307]
Length = 534
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 190/309 (61%), Positives = 234/309 (75%), Gaps = 3/309 (0%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
+LP ++ L +R LLEV+LDLGR+PEARY G + L + + +L +
Sbjct: 1 MLPPVVQRALAGPEQREGLLEVVLDLGRVPEARYPGRV--RALGNDAIERADLAAVLQRL 58
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G FGGDNRAGIE TLHRISAIR+R G +VGLTCRVGRAV G + MV DLL G+S+L +G
Sbjct: 59 GPFGGDNRAGIERTLHRISAIRNRTGDVVGLTCRVGRAVFGTVAMVRDLLDTGQSLLLMG 118
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT +REIARVL+D+ Q+RVV++DTSNEI GDGDIPH AIG ARRMQV P LQH
Sbjct: 119 RPGVGKTTALREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPELQH 178
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+I+NP LSDL
Sbjct: 179 QVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNELANLIRNPTLSDL 238
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 308
+GG+ +VTLGDEEAR RR QK++LER A PTF +EM RH W+ H+ +VD+LLRG
Sbjct: 239 VGGIQSVTLGDEEARRRRTQKTVLERAAEPTFPLAVEMHSRHRWLVHRDVAGTVDLLLRG 298
Query: 309 KTPLVEIRK 317
+ ++R+
Sbjct: 299 QPSHPQVRE 307
>gi|269925800|ref|YP_003322423.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermobaculum terrenum ATCC BAA-798]
gi|269789460|gb|ACZ41601.1| single-stranded nucleic acid binding R3H domain protein
[Thermobaculum terrenum ATCC BAA-798]
Length = 551
Score = 380 bits (977), Expect = e-103, Method: Compositional matrix adjust.
Identities = 197/326 (60%), Positives = 241/326 (73%), Gaps = 3/326 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A +P + L+ L+EV++DLGRLPEAR+ L EV+ E+L
Sbjct: 19 LDAMLAAIPPRISRPLKEMPDLPDLIEVVMDLGRLPEARF--PHREVTLGDNEVTHEDLR 76
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y S +G FG DNRAGIE TLHRISAIR+RKG ++G+TCRVGRAV G I+++ DL+ GK
Sbjct: 77 YVISRIGSFGDDNRAGIERTLHRISAIRNRKGDVIGITCRVGRAVMGTINIIRDLVETGK 136
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT++RE+ARVLS++ +KRV+IVDTSNEI GDGDIPH AIG ARRMQVP
Sbjct: 137 SILILGRPGVGKTTMLREVARVLSEDLRKRVIIVDTSNEIAGDGDIPHPAIGRARRMQVP 196
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
PS+QH VMIEAVENHMPEVII+DEIGTE EA A R+IAERGV LIGTAHG LEN++ N
Sbjct: 197 TPSMQHAVMIEAVENHMPEVIIIDEIGTELEAAAARTIAERGVQLIGTAHGNTLENLMMN 256
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTLGDEEA+ R QKSILERKAPPTF L+E+++R H ++V
Sbjct: 257 PTLSDLIGGIQSVTLGDEEAKRRGTQKSILERKAPPTFNILVEIQDRDRVAIHPDVAETV 316
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDR 328
D +LRG E+R RD V ++R
Sbjct: 317 DAILRGYEIKPEVRWRDATGKVHIER 342
>gi|390559754|ref|ZP_10244042.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
gi|390173675|emb|CCF83341.1| conserved hypothetical protein [Nitrolancetus hollandicus Lb]
Length = 563
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/331 (59%), Positives = 242/331 (73%), Gaps = 8/331 (2%)
Query: 7 FWQILPSDLRDRLQN----DSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEEL 62
+LP + D L + +S+ G L+E+++DLGR PEAR+ YL EV+ E L
Sbjct: 27 LLAVLPPHIVDALTSLDGAESRTG-LIEIVMDLGRRPEARFHDH--ETYLSEEEVTREHL 83
Query: 63 EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG 122
+ +G+FG DNRAGIE TLHRISAIRSR G IVGLTCR+GRAV G I ++ DL+ G
Sbjct: 84 AFVAERIGQFGDDNRAGIERTLHRISAIRSRSGDIVGLTCRIGRAVYGTIGIIRDLVESG 143
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+SIL +GRPGVGKTT++RE ARVL+D+ +KRVVIVDTSNEI GDGDIPH +IG ARRMQV
Sbjct: 144 ESILLLGRPGVGKTTMLRETARVLADDLRKRVVIVDTSNEIAGDGDIPHPSIGRARRMQV 203
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
P PSLQH VMIEA+ENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN++
Sbjct: 204 PSPSLQHAVMIEAIENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNTLENLMM 263
Query: 243 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKS 301
NP LSDLIGG+ +VTL DEEAR R QKSILERKAPPTF ++E++ R H+ S
Sbjct: 264 NPTLSDLIGGIQSVTLSDEEARRRGTQKSILERKAPPTFTVMVEIQARDRVAVHRDVAAS 323
Query: 302 VDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 332
VD +LRG+ VEIR+R V V + Y
Sbjct: 324 VDSILRGRPLQVEIRQRGADGEVTVTLEQPY 354
>gi|78185517|ref|YP_377952.1| ATPase [Synechococcus sp. CC9902]
gi|78169811|gb|ABB26908.1| ATPase [Synechococcus sp. CC9902]
Length = 539
Score = 379 bits (973), Expect = e-102, Method: Compositional matrix adjust.
Identities = 190/307 (61%), Positives = 229/307 (74%), Gaps = 3/307 (0%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE 71
P ++ L ++ QLLEV+LDLGR+PEARY G L ++ ++L +G
Sbjct: 18 PQSVQVALSLEASHDQLLEVVLDLGRIPEARYPGR--ASALGDRAITRDDLADVVDKLGR 75
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRP 131
FG DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + MV DLL +S+L +GRP
Sbjct: 76 FGADNRAGIERTLHRISAIRNRQGEVVGLTCRVGRAVFGTVAMVRDLLDSAQSLLLMGRP 135
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 191
GVGKTT +REIARVL+DE Q+RVV++DTSNEI GDGDIPH AIG ARRMQV P QH+V
Sbjct: 136 GVGKTTALREIARVLADEMQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVSSPEQQHQV 195
Query: 192 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
MIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP LSDL+G
Sbjct: 196 MIEAVENHMPEVIVIDEIGTELEAMAARTIAERGVMLVATAHGNALANLIKNPTLSDLVG 255
Query: 252 GVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKT 310
G+ +VTLGD+EAR RR QK++LER A PTF +EM RH W H +VD LLRG+
Sbjct: 256 GIQSVTLGDDEARRRRTQKTVLERAAEPTFPLAVEMHSRHRWSIHADVAATVDQLLRGQQ 315
Query: 311 PLVEIRK 317
P VE R+
Sbjct: 316 PRVEQRE 322
>gi|71842246|ref|YP_277334.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
gi|60101489|gb|AAX13833.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
gi|336286160|gb|AEI29496.1| hypothetical chloroplast RF45 [Emiliania huxleyi]
Length = 558
Score = 379 bits (972), Expect = e-102, Method: Compositional matrix adjust.
Identities = 185/315 (58%), Positives = 233/315 (73%), Gaps = 3/315 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP + L+ R QL+E++LD+GR PEAR+ G KYL + ++LE
Sbjct: 7 LNQLLDILPEFISKPLRTTEMRTQLIEIVLDIGRRPEARF--ATGTKYLSYKTIVWQDLE 64
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y +G+F GDNRAGIE TLHR+SA+R+R G ++GLTCR+GRA+ G ++++ DLL K
Sbjct: 65 YVLKRLGKFSGDNRAGIEKTLHRVSALRNRNGGVIGLTCRIGRAIFGTVNIICDLLEKRK 124
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT +REIARVLSD+ KRV+I+DTSNEI GDGD+PH +IG ARRMQV
Sbjct: 125 SILLLGRPGVGKTTAIREIARVLSDDMNKRVIIIDTSNEIAGDGDLPHPSIGKARRMQVR 184
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QH+VMIEAVENHMPE+II+DEIGTE EA A R+IAERGV L+GTAHG L+N+IKN
Sbjct: 185 NPQNQHQVMIEAVENHMPEIIIIDEIGTELEATAARTIAERGVQLVGTAHGSALDNLIKN 244
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P L+DLIGG+ VTLGDEEAR R KSILERKAPPTF +E+ WV H E+SV
Sbjct: 245 PTLTDLIGGIQYVTLGDEEARRRGSSKSILERKAPPTFEIAVEIHNVKTWVIHDNIERSV 304
Query: 303 DMLLRGKTPLVEIRK 317
D+LL+G+ ++ R+
Sbjct: 305 DLLLQGQNLALQKRE 319
>gi|206901965|ref|YP_002250502.1| single-stranded nucleic acid binding R3H [Dictyoglomus thermophilum
H-6-12]
gi|206741068|gb|ACI20126.1| single-stranded nucleic acid binding R3H [Dictyoglomus thermophilum
H-6-12]
Length = 515
Score = 378 bits (970), Expect = e-102, Method: Compositional matrix adjust.
Identities = 195/316 (61%), Positives = 238/316 (75%), Gaps = 9/316 (2%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE---FGGKYLRSTEVSVEELE 63
F I PSD++ RL+ D L+EV+LDLGR EAR+ + F G++ +TE E+L
Sbjct: 15 FLAIFPSDIKSRLEQDPDIKDLIEVVLDLGREIEARFYKKTVVFEGRF--TTE---EDLN 69
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y + VGEF GD RAGIE TLHRISAI +R G I+GLTCRVGRAV G +D++ D++ GK
Sbjct: 70 YIIARVGEFSGDKRAGIERTLHRISAIENRHGRIIGLTCRVGRAVLGTVDIIRDVIETGK 129
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
+IL +GRPGVGKTT++RE ARVL+DE KRV+I+DTSNEIGGDGDIPH AIG ARRMQVP
Sbjct: 130 NILLLGRPGVGKTTLLRETARVLADELGKRVIIIDTSNEIGGDGDIPHPAIGRARRMQVP 189
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P+ QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG L+N++ N
Sbjct: 190 NPAKQHDVMIEAVENHMPEVIVIDEIGTELEAKAARTIAERGVQLIGTAHGITLQNLLLN 249
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSV 302
P LSDL+GG+ VTL DEEA+ R QK++LERKAPPTF +IE++ER + H K+V
Sbjct: 250 PTLSDLVGGIQVVTLSDEEAKRRGTQKTVLERKAPPTFQVVIEIQERDRLAIHHDVAKTV 309
Query: 303 DMLLRGKTPLVEIRKR 318
D LLRG EIR R
Sbjct: 310 DALLRGYIIKPEIRLR 325
>gi|156743650|ref|YP_001433779.1| single-stranded nucleic acid binding R3H domain-containing protein
[Roseiflexus castenholzii DSM 13941]
gi|156234978|gb|ABU59761.1| single-stranded nucleic acid binding R3H domain protein
[Roseiflexus castenholzii DSM 13941]
Length = 538
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/314 (60%), Positives = 236/314 (75%), Gaps = 4/314 (1%)
Query: 7 FWQILPSDLRDRLQ-NDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
+ LP +R ++ + LLEVI+DLGRLPEARY ++L + EV+ E+++Y
Sbjct: 14 LLETLPPPIRQAIEAGPDDQEDLLEVIMDLGRLPEARYRNH--ERFLSNHEVTQEDIDYV 71
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
+ +G FG DNRAGI TLHRISAIR+R G ++GLTCRVGRAV G I ++ DL+ GKS+
Sbjct: 72 IARIGAFGEDNRAGIPRTLHRISAIRNRTGRVIGLTCRVGRAVFGTITILRDLIESGKSV 131
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +GRPGVGKTT++RE ARVL++E +KRVVIVDTSNEI GDGDIPH IG ARRMQVP P
Sbjct: 132 LLLGRPGVGKTTMLRETARVLAEELRKRVVIVDTSNEIAGDGDIPHPGIGRARRMQVPRP 191
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
S QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG+ LEN++ NP
Sbjct: 192 SEQHAVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGQTLENLLSNPT 251
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRE-RHYWVTHKTEKSVDM 304
LSDLIGG+ VTLGDEEAR R QK++LERKAPPTF L+E++ V +VD
Sbjct: 252 LSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDILVEIQNWDQVTVYPDVASAVDN 311
Query: 305 LLRGKTPLVEIRKR 318
LLR ++P E+R+R
Sbjct: 312 LLRAESPRAEVRRR 325
>gi|269836978|ref|YP_003319206.1| single-stranded nucleic acid binding R3H domain-containing protein
[Sphaerobacter thermophilus DSM 20745]
gi|269786241|gb|ACZ38384.1| single-stranded nucleic acid binding R3H domain protein
[Sphaerobacter thermophilus DSM 20745]
Length = 573
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/330 (58%), Positives = 242/330 (73%), Gaps = 6/330 (1%)
Query: 7 FWQILPSDLRDRLQNDS---KRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+LP + + L+ S +R +L+E++LDLGR PEARY YL EV+ E++
Sbjct: 27 LLAVLPPHVVEALEAQSTPEERKELIEIVLDLGRPPEARYPDR--EVYLSDREVTREDIA 84
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y +G FG DNRAGIE TLHRISAIRSR G IVGLTCR+GRAV G I +V DL+ G+
Sbjct: 85 YVAERIGRFGDDNRAGIERTLHRISAIRSRSGQIVGLTCRIGRAVYGTIGIVRDLVESGE 144
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT++RE ARVL+D+ KRV+IVDTSNEI GDGDIPH +IG ARRMQVP
Sbjct: 145 SLLLLGRPGVGKTTMLRETARVLADDLGKRVIIVDTSNEIAGDGDIPHPSIGRARRMQVP 204
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P++QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG LEN++ N
Sbjct: 205 TPAMQHAVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNTLENLMMN 264
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTL DEEAR R QKSILERKAPPTF ++E++ R ++ +V
Sbjct: 265 PTLSDLIGGIQSVTLSDEEARRRGTQKSILERKAPPTFTMMVEIQARDRVAVYRDVASAV 324
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 332
D +LRG+ VE+R+R +V V + Y
Sbjct: 325 DAILRGQPLRVEVRQRAPDGSVTVTYEQPY 354
>gi|217967175|ref|YP_002352681.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dictyoglomus turgidum DSM 6724]
gi|217336274|gb|ACK42067.1| single-stranded nucleic acid binding R3H domain protein
[Dictyoglomus turgidum DSM 6724]
Length = 515
Score = 377 bits (968), Expect = e-102, Method: Compositional matrix adjust.
Identities = 194/316 (61%), Positives = 239/316 (75%), Gaps = 9/316 (2%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE---FGGKYLRSTEVSVEELE 63
F I P+D+++RL+ D L+EV+LDLGR EAR+ + F G++ +TE E+L
Sbjct: 15 FLAIFPNDIKNRLEQDPDIKDLIEVVLDLGREIEARFYKKTVIFEGRF--TTE---EDLN 69
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y + VGEF GD RAGIE TLHRISAI +R G I+GLTCRVGRAV G +D++ D++ GK
Sbjct: 70 YIIARVGEFSGDKRAGIERTLHRISAIENRHGRIIGLTCRVGRAVLGTVDIIRDVIETGK 129
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
+IL +G+PGVGKTT++RE ARVL+DE KRV+I+DTSNEIGGDGDIPH AIG ARRMQVP
Sbjct: 130 NILLLGKPGVGKTTLLRETARVLADELGKRVIIIDTSNEIGGDGDIPHPAIGRARRMQVP 189
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
PS QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG L+N++ N
Sbjct: 190 NPSKQHDVMIEAVENHMPEVIVIDEIGTELEAKAARTIAERGVQLIGTAHGITLQNLLLN 249
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSV 302
P LSDL+GG+ VTL DEEA+ R QK++LERKAPPTF +IE++ER + H K+V
Sbjct: 250 PTLSDLVGGIQVVTLSDEEAKRRGTQKTVLERKAPPTFQVVIEIQERDRLAIHHDVAKTV 309
Query: 303 DMLLRGKTPLVEIRKR 318
D LLRG EIR R
Sbjct: 310 DALLRGYIIKPEIRVR 325
>gi|320159578|ref|YP_004172802.1| hypothetical protein ANT_01680 [Anaerolinea thermophila UNI-1]
gi|319993431|dbj|BAJ62202.1| hypothetical protein ANT_01680 [Anaerolinea thermophila UNI-1]
Length = 538
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 191/320 (59%), Positives = 242/320 (75%), Gaps = 5/320 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
+LP + + +QN + QLLE+++DLGR P AR+ G L EV+ E+L++ S +
Sbjct: 16 VLPPRIAEAVQNANNSDQLLEIVMDLGRKPVARFT--TGDLVLLEEEVTHEDLDFTVSRI 73
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
GEF DNRAG+E TLHRISAIR+R+G IVGLTCRVGRAV G ID++ DL+ GKS+L +G
Sbjct: 74 GEFDADNRAGLERTLHRISAIRNRRGHIVGLTCRVGRAVYGTIDIIQDLIESGKSVLILG 133
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPG+GKTT++RE AR+L++ +KRVVIVDTSNEIGGDGD+PH A+G ARRMQVP+PSLQH
Sbjct: 134 RPGIGKTTMLREAARILAE--KKRVVIVDTSNEIGGDGDVPHPAVGAARRMQVPKPSLQH 191
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
+VMIEAVENH PEVI++DEIG E EA A R+IAERGV LIGTAHG LEN++ NP LSDL
Sbjct: 192 EVMIEAVENHNPEVIVIDEIGRELEAAAARTIAERGVQLIGTAHGRTLENLLLNPTLSDL 251
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 308
+GG++ VTL DEEAR R QK++LER+APPTF LIE++ER H +VD L+R
Sbjct: 252 VGGIEAVTLSDEEARRRGTQKTVLERRAPPTFDVLIEIQERDRLAIHPDVAAAVDALVRN 311
Query: 309 KTPLVEIRKRDDRFNVVVDR 328
EIR RD N+ V++
Sbjct: 312 NPLPPEIRYRDAEGNIHVEK 331
>gi|452205008|ref|YP_007485137.1| R3H domain-containing protein [Dehalococcoides mccartyi BTF08]
gi|452112064|gb|AGG07795.1| R3H domain-containing protein [Dehalococcoides mccartyi BTF08]
Length = 509
Score = 376 bits (965), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 243/328 (74%), Gaps = 3/328 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A ++LP +R L + + R L+E+++DLGR PEAR+ L +V+ E+++
Sbjct: 9 LNALLEVLPPHIRQPLTDPANRENLIEIVMDLGRTPEARFPDR--EIILSERDVTQEDID 66
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y S +G+FG DNRAGIE TLHRISAIR+RKG IVGLT RVGRAV G I ++ DL+ +
Sbjct: 67 YVSSRIGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIKSDQ 126
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH AIG ARRMQV
Sbjct: 127 SVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVR 186
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAHG L+N++ N
Sbjct: 187 TPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLN 246
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E+++R+ H +V
Sbjct: 247 PTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHPDVGAAV 306
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWK 330
D +LRG +P EIR D VV+ + +
Sbjct: 307 DSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|148657339|ref|YP_001277544.1| single-stranded nucleic acid binding R3H domain-containing protein
[Roseiflexus sp. RS-1]
gi|148569449|gb|ABQ91594.1| single-stranded nucleic acid binding R3H domain protein
[Roseiflexus sp. RS-1]
Length = 538
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/314 (60%), Positives = 233/314 (74%), Gaps = 4/314 (1%)
Query: 7 FWQILPSDLRDRLQN-DSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
LP+ +R ++ R LLEVI+DLGRLPEARY ++L EV+ E+++Y
Sbjct: 14 LLATLPAPIRQAIETGPDDREDLLEVIMDLGRLPEARYRNH--ERFLSDREVTQEDIDYV 71
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
+G FG DNRAGI TLHRISAIR+R G ++GLTCRVGRAV G I ++ DL+ GKS+
Sbjct: 72 IGRIGAFGEDNRAGIPRTLHRISAIRNRTGRVIGLTCRVGRAVFGTITILRDLIESGKSV 131
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +GRPGVGKTT++RE ARVL+++ +KRVVIVDTSNEI GDGDIPH IG ARRMQVP P
Sbjct: 132 LLLGRPGVGKTTMLRETARVLAEDLRKRVVIVDTSNEIAGDGDIPHPGIGRARRMQVPRP 191
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
S QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV LIGTAHG+ LEN++ NP
Sbjct: 192 SEQHAVMIEAVENHMPEVIVIDEIGTELEALAARTIAERGVQLIGTAHGQTLENLLSNPT 251
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRE-RHYWVTHKTEKSVDM 304
LSDLIGG+ VTLGDEEAR R QK++LERKAPPTF L+E++ V +VD
Sbjct: 252 LSDLIGGIQAVTLGDEEARRRGTQKTVLERKAPPTFDILVEIQNWDQVTVYPDVASAVDS 311
Query: 305 LLRGKTPLVEIRKR 318
LLR + P E+R+R
Sbjct: 312 LLRSEPPQAEVRRR 325
>gi|383761637|ref|YP_005440619.1| hypothetical protein CLDAP_06820 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
gi|381381905|dbj|BAL98721.1| hypothetical protein CLDAP_06820 [Caldilinea aerophila DSM 14535 =
NBRC 104270]
Length = 542
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/327 (59%), Positives = 247/327 (75%), Gaps = 5/327 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
+LP +R L+ ++ L+EVI+DLGRLPEAR+ G L EV+ E+L V
Sbjct: 16 VLPERIRRALEQSERKENLIEVIMDLGRLPEARFTD--GEMVLSDQEVTREDLNRVVERV 73
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G+FG DNRAGIE TLHRISAIR+RKG ++GLTCRVGRAV G I+++ D+++ +SIL +G
Sbjct: 74 GDFGADNRAGIERTLHRISAIRNRKGDVIGLTCRVGRAVYGAIEIIKDIVNSDRSILLLG 133
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT++RE AR+ S+ KRVVIVDTSNEI GDGDIPH AIG +RRMQVP+PSLQH
Sbjct: 134 RPGVGKTTLLREAARLRSE--VKRVVIVDTSNEIAGDGDIPHPAIGRSRRMQVPDPSLQH 191
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
++MIEAVENHMPEVII+DEIG E EA A R+IAERGV LIGTAHG LEN++ NP LSDL
Sbjct: 192 ELMIEAVENHMPEVIIIDEIGREQEAIAARTIAERGVQLIGTAHGNSLENLLMNPTLSDL 251
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRG 308
+GG+++VTL DEEAR R QKS+LER+APPTF LIE+++R H + H ++VD +LRG
Sbjct: 252 VGGIESVTLSDEEARRRGTQKSVLERRAPPTFDVLIEIKDRQHLVIHHDVAQAVDAILRG 311
Query: 309 KTPLVEIRKRDDRFNVVVDRWKTYDRH 335
+ + E R D++ + V R +T H
Sbjct: 312 RELIPEERFVDEQGVIHVRRLETTPEH 338
>gi|51209952|ref|YP_063616.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
var. liui]
gi|50657706|gb|AAT79691.1| conserved hypothetical plastid protein [Gracilaria tenuistipitata
var. liui]
Length = 562
Score = 375 bits (964), Expect = e-101, Method: Compositional matrix adjust.
Identities = 185/307 (60%), Positives = 240/307 (78%), Gaps = 3/307 (0%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE 71
P+ +R LQ +R L+EV++DLGR PEAR+ G +YL ++ ++L+Y+ +G
Sbjct: 15 PNFIRHPLQIHPERKVLIEVVMDLGRKPEARF--PKGPEYLSKRIITWQDLDYSIKRIGN 72
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRP 131
F DNR+GIE TLHRIS+I++R+G+ +GLTCRVGRA+ G I ++ DLL+ SIL +G+P
Sbjct: 73 FSADNRSGIERTLHRISSIKNRQGSTIGLTCRVGRAILGTISIIRDLLNTYPSILLLGKP 132
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 191
GVGKTTV+REIARVL+DE +KRVVI+DTSNEI GDGD+PH AIG ARRMQV +P LQH+V
Sbjct: 133 GVGKTTVIREIARVLADEMEKRVVIIDTSNEIAGDGDVPHPAIGRARRMQVSKPELQHQV 192
Query: 192 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
MIEA+ENHMPEVII+DEIGTE EA A R+IAERGV L+GTAHG +L+++IKNPILSDLIG
Sbjct: 193 MIEAIENHMPEVIIIDEIGTELEALAARTIAERGVQLVGTAHGNYLDSLIKNPILSDLIG 252
Query: 252 GVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTE-KSVDMLLRGKT 310
G+ VTLGD+EA+ R QKSILERKA P F IE+ +RH W+ H++ ++VD LL+G
Sbjct: 253 GIQYVTLGDDEAKRRGSQKSILERKASPAFQVAIEIHDRHSWIVHESVGRAVDQLLQGVN 312
Query: 311 PLVEIRK 317
V+ RK
Sbjct: 313 LWVQRRK 319
>gi|452203573|ref|YP_007483706.1| R3H domain-containing protein [Dehalococcoides mccartyi DCMB5]
gi|452110632|gb|AGG06364.1| R3H domain-containing protein [Dehalococcoides mccartyi DCMB5]
Length = 509
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 242/328 (73%), Gaps = 3/328 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A ++LP +R L + + R L+E+++DLGR PEAR+ L +V+ E+++
Sbjct: 9 LNALLEVLPPHIRQPLTDPANRENLIEIVMDLGRTPEARFPDR--EIILSERDVTQEDID 66
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y S G+FG DNRAGIE TLHRISAIR+RKG IVGLT RVGRAV G I ++ DL+ +
Sbjct: 67 YVSSRTGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIKSDQ 126
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH AIG ARRMQV
Sbjct: 127 SVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVR 186
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAHG L+N++ N
Sbjct: 187 TPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLN 246
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E+++R+ H +V
Sbjct: 247 PTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHPDVGAAV 306
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWK 330
D +LRG +P EIR D VV+ + +
Sbjct: 307 DSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|147669347|ref|YP_001214165.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. BAV1]
gi|146270295|gb|ABQ17287.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. BAV1]
Length = 509
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/328 (57%), Positives = 242/328 (73%), Gaps = 3/328 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A ++LP +R L + + R L+E+++DLGR PEAR+ L +V+ E+++
Sbjct: 9 LNALLEVLPPHIRQPLTDPANRENLIEIVMDLGRTPEARFPDR--EIILSERDVTQEDID 66
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y S G+FG DNRAGIE TLHRISAIR+RKG IVGLT RVGRAV G I ++ DL+ +
Sbjct: 67 YVSSRTGDFGDDNRAGIERTLHRISAIRNRKGKIVGLTLRVGRAVFGTIKIIQDLIKSDQ 126
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH AIG ARRMQV
Sbjct: 127 SVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVR 186
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAHG L+N++ N
Sbjct: 187 TPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLN 246
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E+++R+ H +V
Sbjct: 247 PTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHPDVGAAV 306
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWK 330
D +LRG +P EIR D VV+ + +
Sbjct: 307 DSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|189095330|ref|YP_001936343.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
gi|157694673|gb|ABV65949.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
gi|157777904|gb|ABV70090.1| conserved hypothetical plastid protein Ycf45 [Heterosigma akashiwo]
Length = 451
Score = 375 bits (962), Expect = e-101, Method: Compositional matrix adjust.
Identities = 183/312 (58%), Positives = 231/312 (74%), Gaps = 3/312 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+Q+ P+ LR +Q S R L+EV+LDLG+ PE R+ G YL + VS ++L++
Sbjct: 10 LFQVFPNYLRIAIQYHSNRLNLIEVVLDLGKKPEGRFFD--GTSYLSNRIVSWQDLDFCT 67
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
V F DNRAGIE TLHRIS +R+RKG I+GLTCRVGR++ G + +V DLL +SIL
Sbjct: 68 KQVSNFNDDNRAGIERTLHRISCLRNRKGVIIGLTCRVGRSLFGTVSIVRDLLSSNQSIL 127
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G+PGVGKTT +REIAR+LSDE +KRVVIVDTSNEIGG+ DIPHS IG ARRMQV +
Sbjct: 128 ILGKPGVGKTTTIREIARILSDELRKRVVIVDTSNEIGGNSDIPHSGIGRARRMQVSKSE 187
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH VM+EAVENHMPEVIIVDEIGT+ E A R+IAERGV +IGT HG LEN+IKNPIL
Sbjct: 188 LQHNVMVEAVENHMPEVIIVDEIGTDLEVLAVRTIAERGVQVIGTVHGNNLENLIKNPIL 247
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
D++GGV V LGDEEA+ R QK++LERKAPP+F IE+ ++ W H+ +SVD L
Sbjct: 248 MDIVGGVQNVILGDEEAKKRGTQKNVLERKAPPSFQIAIEINQKMNWFVHENITQSVDRL 307
Query: 306 LRGKTPLVEIRK 317
L+ + P ++ RK
Sbjct: 308 LQKQFPYLQSRK 319
>gi|188584674|ref|YP_001916219.1| ATPase AAA [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349361|gb|ACB83631.1| AAA ATPase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 445
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 194/335 (57%), Positives = 238/335 (71%), Gaps = 10/335 (2%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+I P +R+ LQ + L+EV+LDLGR PEARY EF YL V+ ++LE+
Sbjct: 11 MLEIFPPHIRENLQKRNDLEDLVEVVLDLGRKPEARYPREF--IYLTDDTVTEKDLEFIY 68
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ G FG DNR+GIE TLHRISAIR+R+ IVGLTCRVG+AV G D++ D++ G L
Sbjct: 69 NRTGPFGLDNRSGIEKTLHRISAIRNRRDKIVGLTCRVGKAVYGTADIIRDIVERGDKTL 128
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT++RE AR+L+DEF+KRV+IVDTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 129 LLGRPGVGKTTILREAARILADEFRKRVIIVDTSNEIAGDGDIPHPAIGHARRMQVKTPD 188
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH VMIEAVENHMPEVII+DEIGT EA A R+IAERGV LI TAHG LEN+I NP L
Sbjct: 189 KQHDVMIEAVENHMPEVIIIDEIGTYQEAEAARTIAERGVQLIATAHGNTLENLILNPTL 248
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
S+LIGG+DTVTLGDEEA+ R QK++LERKAP TF ++E+ +R+ H EK VD +
Sbjct: 249 SELIGGIDTVTLGDEEAKRRNSQKTVLERKAPSTFDAVVEIFDRNTLKIHAPLEKVVDYI 308
Query: 306 LRGKTPLVEIRKRDD-------RFNVVVDRWKTYD 333
LRG P EIR R + + + + D W D
Sbjct: 309 LRGGAPRPEIRLRKNDGQHEIIQNSNITDEWNEMD 343
>gi|88807880|ref|ZP_01123391.1| hypothetical protein WH7805_06956 [Synechococcus sp. WH 7805]
gi|88787919|gb|EAR19075.1| hypothetical protein WH7805_06956 [Synechococcus sp. WH 7805]
Length = 546
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 195/309 (63%), Positives = 233/309 (75%), Gaps = 9/309 (2%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE---FGGKYLRSTEVSVEELE 63
+LP+ + L+ D QLLEV+LDLGRLPEARY G G + L ++LE
Sbjct: 13 LLSLLPASVGRVLEQDDHSDQLLEVVLDLGRLPEARYPGRSLALGERLLER-----KDLE 67
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+G+FG DNRAGIE TLHRISAIR+R+G +VGLTCRVGRAV G + MV DLL +
Sbjct: 68 EMVDRLGQFGADNRAGIERTLHRISAIRNRRGDVVGLTCRVGRAVFGTVAMVRDLLDSDQ 127
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REIARVL+DE QKRVV++DTSNEI GDGDIPH AIG ARRMQV
Sbjct: 128 SLLLMGRPGVGKTTALREIARVLADELQKRVVVIDTSNEIAGDGDIPHPAIGRARRMQVA 187
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKN
Sbjct: 188 RPELQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNALTNLIKN 247
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P L DL+GG+++VTLGDEEAR RR QK++LER A PTF IEM RH W H ++V
Sbjct: 248 PTLCDLVGGIESVTLGDEEARRRRSQKTVLERAAEPTFPIAIEMHSRHRWAVHDDVARTV 307
Query: 303 DMLLRGKTP 311
D+LLRG++P
Sbjct: 308 DLLLRGQSP 316
>gi|163847787|ref|YP_001635831.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus aurantiacus J-10-fl]
gi|222525655|ref|YP_002570126.1| single-stranded nucleic acid binding R3H domain-containing protein
[Chloroflexus sp. Y-400-fl]
gi|163669076|gb|ABY35442.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus aurantiacus J-10-fl]
gi|222449534|gb|ACM53800.1| single-stranded nucleic acid binding R3H domain protein
[Chloroflexus sp. Y-400-fl]
Length = 539
Score = 374 bits (961), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/319 (58%), Positives = 233/319 (73%), Gaps = 3/319 (0%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEE 61
N LP + + ++ + + LLE+++DLGRLPEARY G +L EV+ E+
Sbjct: 8 NDIQLLLATLPPAISEAIRKANDQDNLLEIVMDLGRLPEARYRGH--ELFLSDREVTSED 65
Query: 62 LEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY 121
++Y +GEFG DNRAGI TLHRIS IR+R+G ++GLTCRVGRAV G +D++ DL+
Sbjct: 66 IQYVIERIGEFGEDNRAGIPRTLHRISGIRNRRGVVIGLTCRVGRAVYGTVDIIRDLVET 125
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
G+SIL +G+PG GKTT++RE ARVL DE +KRVVIVDTSNEI GDGDIPH IG ARRMQ
Sbjct: 126 GQSILLLGKPGTGKTTLLRETARVLGDELRKRVVIVDTSNEIAGDGDIPHPGIGRARRMQ 185
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
VP P+ QH VMIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+GTAHG L+N++
Sbjct: 186 VPRPAEQHNVMIEAVENHMPEVIVIDEIGTELEAAAARTIAERGVQLVGTAHGNTLDNLM 245
Query: 242 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRE-RHYWVTHKTEK 300
NP LSDL+GG+ VTLGDEEAR R QK++LERKAPPTF L+E++ V
Sbjct: 246 VNPTLSDLVGGIQAVTLGDEEARRRGTQKTVLERKAPPTFSILVEIQSWDRVMVYPDVAA 305
Query: 301 SVDMLLRGKTPLVEIRKRD 319
+VD +LRG+ P E R RD
Sbjct: 306 AVDAILRGEDPPCEQRFRD 324
>gi|292490546|ref|YP_003525985.1| single-stranded nucleic acid binding R3H domain-containing protein
[Nitrosococcus halophilus Nc4]
gi|291579141|gb|ADE13598.1| single-stranded nucleic acid binding R3H domain protein
[Nitrosococcus halophilus Nc4]
Length = 500
Score = 373 bits (958), Expect = e-101, Method: Compositional matrix adjust.
Identities = 193/303 (63%), Positives = 232/303 (76%), Gaps = 4/303 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
ILP LR LQ ++ LLE+I+D+GR P+AR+ G+ L + VS +LE ++V
Sbjct: 16 ILPRSLRTVLQGLPQQ-HLLEIIMDVGRSPQARFSGQT--VNLSADPVSPADLEQVVASV 72
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
GEF DNRAGIEGTLHRIS +R+R+G I+GLT RVGRAV+G ID + DL+ G S+L +G
Sbjct: 73 GEFSADNRAGIEGTLHRISCLRNRRGKIIGLTLRVGRAVTGTIDSIRDLIERGASLLLLG 132
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT +REIARVL+DEF KRV+I+DTSNEI GDGDIPH AIG+ARRMQVP P QH
Sbjct: 133 RPGVGKTTRLREIARVLADEFGKRVIIIDTSNEIAGDGDIPHPAIGSARRMQVPHPERQH 192
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
VMIEAVENHMPEVIIVDEIGT AEA A R+IAERGV LIGTAHG LEN++ NP L+DL
Sbjct: 193 GVMIEAVENHMPEVIIVDEIGTGAEATAARTIAERGVQLIGTAHGNTLENLVMNPTLADL 252
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 308
+GGV TVTLGD+EAR R QK+I ERKAPPTF ++E+ +R + H T +VD LLRG
Sbjct: 253 VGGVQTVTLGDDEARLRGTQKTINERKAPPTFDAVVEIVDREAVIVHPDTAGAVDKLLRG 312
Query: 309 KTP 311
P
Sbjct: 313 LDP 315
>gi|159475499|ref|XP_001695856.1| hypothetical protein CHLREDRAFT_118675 [Chlamydomonas reinhardtii]
gi|158275416|gb|EDP01193.1| predicted protein [Chlamydomonas reinhardtii]
Length = 551
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 186/303 (61%), Positives = 229/303 (75%), Gaps = 3/303 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
Q+LP+ +R L++ + +LLEV++DLGR P AR+ G G L + ++ E+LE+A
Sbjct: 5 LVQLLPASVRAALEDHPQMLELLEVVMDLGRPPLARFPG--GDVKLSTAAITAEDLEFAV 62
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VGEFGGDNRAGI+ TLHRIS +R+R G I+GLTCRVGRA+ G MV DL+ G SIL
Sbjct: 63 RQVGEFGGDNRAGIDRTLHRISCMRNRTGRIIGLTCRVGRAIKGSAQMVRDLVLSGASIL 122
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +RE++R+L+DE KRVVIVDTSNEIGGDGDIPHS IG ARRMQV P
Sbjct: 123 LLGRPGVGKTTAIREVSRMLADECTKRVVIVDTSNEIGGDGDIPHSGIGRARRMQVAHPE 182
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMP+VI++DEIGT E A R+IA+RGV L+ TAHG LEN+IKNP L
Sbjct: 183 AQHRVMIEAVENHMPQVIVIDEIGTSEECGAARTIAQRGVQLVATAHGNELENVIKNPQL 242
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDML 305
+DL+GG+ +VTLGDEEA+ R QKSILER APPTF IEM ER W H ++VDM+
Sbjct: 243 ADLVGGIQSVTLGDEEAKRRGVQKSILERAAPPTFDVCIEMLERTKWRAHLDVGQAVDMV 302
Query: 306 LRG 308
L G
Sbjct: 303 LAG 305
>gi|73748587|ref|YP_307826.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. CBDB1]
gi|289432613|ref|YP_003462486.1| single-stranded nucleic acid binding R3H domain-containing protein
[Dehalococcoides sp. GT]
gi|73660303|emb|CAI82910.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. CBDB1]
gi|288946333|gb|ADC74030.1| single-stranded nucleic acid binding R3H domain protein
[Dehalococcoides sp. GT]
Length = 509
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 187/328 (57%), Positives = 241/328 (73%), Gaps = 3/328 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A ++LP +R L + + R L+E+++DLGR PEAR+ L +V+ E+++
Sbjct: 9 LNALLEVLPPHIRQPLTDPANRKNLIEIVMDLGRTPEARFPDR--EIILSERDVTQEDID 66
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y S G+FG DNRAGIE TLHRISAIR+RK IVGLT RVGRAV G I ++ DL+ +
Sbjct: 67 YVSSRTGDFGDDNRAGIERTLHRISAIRNRKDKIVGLTLRVGRAVFGTIKIIQDLIKSDQ 126
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT++RE+ARVL+ + +KRVVIVDTSNEI GDGDIPH AIG ARRMQV
Sbjct: 127 SVLMLGRPGVGKTTMLREVARVLAGDLKKRVVIVDTSNEIAGDGDIPHPAIGHARRMQVR 186
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P +QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+GTAHG L+N++ N
Sbjct: 187 TPDMQHAVMIEAVENHMPQVIVIDEIGTELEALAARTIAERGVQLVGTAHGNVLDNLMLN 246
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDLIGG+ +VTLGDEEAR R QK+ILER+APPTF ++E+++R+ H +V
Sbjct: 247 PTLSDLIGGIQSVTLGDEEARRRGTQKTILERRAPPTFQVIVEIQDRNKVAVHPDVGAAV 306
Query: 303 DMLLRGKTPLVEIRKRDDRFNVVVDRWK 330
D +LRG +P EIR D VV+ + +
Sbjct: 307 DSILRGVSPSAEIRYLDGNGEVVISKQQ 334
>gi|116748317|ref|YP_845004.1| single-stranded nucleic acid binding R3H domain-containing protein
[Syntrophobacter fumaroxidans MPOB]
gi|116697381|gb|ABK16569.1| single-stranded nucleic acid binding R3H domain protein
[Syntrophobacter fumaroxidans MPOB]
Length = 515
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 191/318 (60%), Positives = 236/318 (74%), Gaps = 5/318 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
++P ++R +++ + + LLE++LDLGR+PEARY G + L VS+EEL Y S V
Sbjct: 18 VMPRNIRAKIEENPQYHSLLEIVLDLGRIPEARYPGSI--EELSEHPVSLEELNYVVSRV 75
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
FG DNRAGIE TLHRISA R+R G+++GLTCRVGRAV G +D+V D++ G S+L +G
Sbjct: 76 ARFGDDNRAGIERTLHRISAFRNRSGSVIGLTCRVGRAVFGTVDIVRDVVESGHSLLLLG 135
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT++RE ARVL+D+F KRV+IVDTSNEIGGDGDIPH IG ARRMQVP P QH
Sbjct: 136 RPGVGKTTLLREAARVLADDFGKRVIIVDTSNEIGGDGDIPHPGIGRARRMQVPTPGNQH 195
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
VMIEAVENHMPEVI++DEIGTEAEA A R+IAERGV LI T HG LEN+++NP LSDL
Sbjct: 196 GVMIEAVENHMPEVIVIDEIGTEAEALAARTIAERGVQLIATVHGNTLENLLQNPSLSDL 255
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSV-DMLLRG 308
+GG+ +VTL DEEAR R QK++LERK PPTF +IE++E+ H SV D LRG
Sbjct: 256 VGGLQSVTLSDEEARRRGTQKTVLERKLPPTFNVVIEIQEKDRLAVHHDVASVIDYSLRG 315
Query: 309 --KTPLVEIRKRDDRFNV 324
+P V IR D V
Sbjct: 316 FPFSPEVRIRTGDGSVEV 333
>gi|87300916|ref|ZP_01083758.1| hypothetical protein WH5701_05690 [Synechococcus sp. WH 5701]
gi|87284787|gb|EAQ76739.1| hypothetical protein WH5701_05690 [Synechococcus sp. WH 5701]
Length = 564
Score = 372 bits (956), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/312 (59%), Positives = 230/312 (73%), Gaps = 3/312 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
++LP + + L + R QLLEV+LDLGR PEARY G + L + +L
Sbjct: 28 LLEVLPERVGEALASPLSRDQLLEVVLDLGRSPEARYPGR--AQLLDQRPIDRADLAAVV 85
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+G FGGDNRAGIE TLHRISAIR+R G +VGLTCRVGRAV G + MV DLL G+S+L
Sbjct: 86 QRLGSFGGDNRAGIERTLHRISAIRNRGGEVVGLTCRVGRAVFGTVAMVRDLLDSGQSLL 145
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+GRPGVGKTT +REIARVL+D+ ++RVV++DTSNEI GDGDIPH AIG ARRMQV P
Sbjct: 146 LMGRPGVGKTTALREIARVLADDLERRVVVIDTSNEIAGDGDIPHPAIGRARRMQVARPE 205
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVI++DEIGTE EA A R+IAERGVML+ TAHG L N+IKNP L
Sbjct: 206 QQHQVMIEAVENHMPEVIVIDEIGTELEAQAARTIAERGVMLVATAHGNELANLIKNPTL 265
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDML 305
+DLIGG+ +VTLGDEEAR R QK++LER A PTF +EM R W+ H+ ++VD
Sbjct: 266 ADLIGGIQSVTLGDEEARRRGSQKTVLERCADPTFPLAVEMHSRSRWLVHRDVARTVDQQ 325
Query: 306 LRGKTPLVEIRK 317
LRG+ ++R+
Sbjct: 326 LRGQPVRPQVRE 337
>gi|300087975|ref|YP_003758497.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Dehalogenimonas lykanthroporepellens BL-DC-9]
gi|299527708|gb|ADJ26176.1| single-stranded nucleic acid binding R3H domain protein
[Dehalogenimonas lykanthroporepellens BL-DC-9]
Length = 512
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 187/318 (58%), Positives = 233/318 (73%), Gaps = 3/318 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
ILP ++R+ L L+EV++DLGR PEAR+L LR+ E S ++E
Sbjct: 9 LSILLDILPPEIREPLNQQEDLQHLIEVVIDLGRPPEARFLRR--EIVLRAEESSESDIE 66
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y + +G+FG DNRAGIE TLHRISAIR+RKG ++GLT RVGRAV G I ++ DL+ G+
Sbjct: 67 YVVNRIGQFGEDNRAGIERTLHRISAIRNRKGRVIGLTVRVGRAVYGTIKIIDDLIQSGQ 126
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT++RE ARVL+D+ +KRVVIVDTSNEI GDGDIPH AIG ARRMQV
Sbjct: 127 SVLLMGRPGVGKTTMLRETARVLADDLRKRVVIVDTSNEIAGDGDIPHPAIGRARRMQVK 186
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QH VMIEAVENHMPEV+++DEIGTE EA A R+IAERGV L+GTAHG L N+++N
Sbjct: 187 SPERQHAVMIEAVENHMPEVVVIDEIGTELEAQAARTIAERGVQLVGTAHGNTLANLMQN 246
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P L+DLIGG+ VTLGDEEAR R QK++LERK+PPTF ++E++ER H +V
Sbjct: 247 PTLADLIGGIQAVTLGDEEARRRGTQKTVLERKSPPTFNVVVEIQERDQVAVHPNVSVTV 306
Query: 303 DMLLRGKTPLVEIRKRDD 320
D +LRG P EIR D
Sbjct: 307 DAILRGLHPETEIRSLGD 324
>gi|33863996|ref|NP_895556.1| ATPase AAA [Prochlorococcus marinus str. MIT 9313]
gi|33635580|emb|CAE21904.1| AAA ATPase superfamily [Prochlorococcus marinus str. MIT 9313]
Length = 545
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/300 (62%), Positives = 226/300 (75%), Gaps = 3/300 (1%)
Query: 19 LQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRA 78
L + R QLLEV+LDLGR+PEARY G L ++ ++L+ +G+FG DNRA
Sbjct: 25 LATPNSREQLLEVVLDLGRVPEARYPGR--ALALGEQCLTRDDLQTTVDRLGQFGADNRA 82
Query: 79 GIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTV 138
GIE TLHRISAIR+R+ +VGLTCRVGRAV G + MV DLL G+S+L +GRPGVGKTT
Sbjct: 83 GIERTLHRISAIRNRQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTA 142
Query: 139 MREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVEN 198
+REIARVL+D+ Q+RVV++DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVEN
Sbjct: 143 LREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVEN 202
Query: 199 HMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 258
HMPEVI++DEIGTE EA A R+IAERGV L+ TAHG L N+IKNP LSDL+GG+ VTL
Sbjct: 203 HMPEVIVIDEIGTELEAQAARTIAERGVQLVATAHGNALANLIKNPTLSDLVGGIQAVTL 262
Query: 259 GDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 317
GDEEAR RR QK++LER A PTF +EM R+ W H +VD LLRG+ P ++R+
Sbjct: 263 GDEEARRRRTQKTVLERAAEPTFPVAVEMNTRNRWSIHADVAATVDQLLRGQLPRPQLRE 322
>gi|124023992|ref|YP_001018299.1| ATPase AAA [Prochlorococcus marinus str. MIT 9303]
gi|123964278|gb|ABM79034.1| AAA ATPase superfamily protein [Prochlorococcus marinus str. MIT
9303]
Length = 545
Score = 372 bits (954), Expect = e-100, Method: Compositional matrix adjust.
Identities = 186/302 (61%), Positives = 227/302 (75%), Gaps = 3/302 (0%)
Query: 19 LQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRA 78
L + R QLLEV+LDLGR+PEARY G L ++ ++L+ +G+FG DNRA
Sbjct: 25 LATPNSREQLLEVVLDLGRVPEARYPGR--ALALGEQCLTRDDLQTTVDRLGQFGADNRA 82
Query: 79 GIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTV 138
GIE TLHRISAIR+R+ +VGLTCRVGRAV G + MV DLL G+S+L +GRPGVGKTT
Sbjct: 83 GIERTLHRISAIRNRQREVVGLTCRVGRAVFGTVAMVRDLLDSGQSLLLMGRPGVGKTTA 142
Query: 139 MREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVEN 198
+REIARVL+D+ Q+RVV++DTSNEI GDGDIPH AIG ARRMQV P QH+VMIEAVEN
Sbjct: 143 LREIARVLADDLQRRVVVIDTSNEIAGDGDIPHPAIGRARRMQVSLPEQQHQVMIEAVEN 202
Query: 199 HMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 258
HMPEVI++DEIGTE EA A R+IAERGV L+ TAHG L N+IKNP LSDL+GG+ VTL
Sbjct: 203 HMPEVIVIDEIGTELEAQAARTIAERGVQLVATAHGNALPNLIKNPTLSDLVGGIQAVTL 262
Query: 259 GDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK 317
GDEEAR RR QK++LER A PTF +E+ R+ W H +VD LLRG+ P ++R+
Sbjct: 263 GDEEARRRRTQKTVLERAAEPTFPVAVEINTRNRWSIHADVAATVDQLLRGQLPRPQLRE 322
Query: 318 RD 319
D
Sbjct: 323 LD 324
>gi|309792154|ref|ZP_07686626.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillochloris trichoides DG-6]
gi|308225695|gb|EFO79451.1| single-stranded nucleic acid binding R3H domain-containing protein
[Oscillochloris trichoides DG6]
Length = 552
Score = 371 bits (953), Expect = e-100, Method: Compositional matrix adjust.
Identities = 184/296 (62%), Positives = 227/296 (76%), Gaps = 9/296 (3%)
Query: 28 LLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRI 87
LLE+++DLGRLPEARY E ++L EV+ +E++Y +G FG DNRAGI TLHRI
Sbjct: 36 LLEIVMDLGRLPEARYRNE--ERFLSDREVTQDEIDYVIERIGVFGEDNRAGIPRTLHRI 93
Query: 88 SAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLS 147
SAIR+R+G ++GLTCRVGRA+ G + ++ DL+ GKSIL +G+PG GKTT++RE ARVL+
Sbjct: 94 SAIRNRRGTVIGLTCRVGRAIFGTVTIIRDLVETGKSILLLGKPGTGKTTLLRETARVLA 153
Query: 148 DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
+EF+KRVVIVDTSNEI GDGDIPH IG ARRMQVP P+ QH VMIEAVENHMPEVI++D
Sbjct: 154 EEFRKRVVIVDTSNEIAGDGDIPHPGIGRARRMQVPRPAEQHAVMIEAVENHMPEVIVID 213
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARR 267
EIGTE EA A R+IAERGV L+GTAHG L+N++ NP LSDL+GG+ VTLGDEEAR R
Sbjct: 214 EIGTELEAMAARTIAERGVQLVGTAHGNTLDNLMINPTLSDLVGGIQAVTLGDEEARRRG 273
Query: 268 CQKSILERKAPPTFYFLIEMRERHYW----VTHKTEKSVDMLLRGKTPLVEIRKRD 319
QK++LERKAPPTF LIE+ W V +VD +LRG+ P E+R RD
Sbjct: 274 TQKTVLERKAPPTFDILIEI---ESWDSVTVYDDVAAAVDAILRGEDPPAELRSRD 326
>gi|374851690|dbj|BAL54642.1| single-stranded nucleic acid binding R3H [uncultured Chloroflexi
bacterium]
Length = 517
Score = 369 bits (947), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 193/324 (59%), Positives = 238/324 (73%), Gaps = 7/324 (2%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
A +LP+D+R ++ LLEVILDLGR+P AR++ LR EV+ EE+E
Sbjct: 10 LDALLAVLPADIRHAVEQADDSDNLLEVILDLGRVPTARFVDR--EVVLREREVTREEIE 67
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y + VGEF DNRAGIE TLHRISAIR+R+G IVGLT RVGRAV G D++ D++ GK
Sbjct: 68 YVDARVGEFDADNRAGIERTLHRISAIRNRRGHIVGLTLRVGRAVYGTSDIIEDIITSGK 127
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +GRPGVGKTT++RE AR+L++ +RV+IVDTSNEIGGDGD+PH AIG ARRMQV
Sbjct: 128 SILLLGRPGVGKTTLLREAARILAE--TRRVIIVDTSNEIGGDGDVPHPAIGKARRMQVR 185
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
EP LQH+VMIEAVENH PEVI++DEIG E EA A R+IAERGV LIGTAHG LEN++ N
Sbjct: 186 EPMLQHEVMIEAVENHNPEVIVIDEIGRELEAAAARTIAERGVQLIGTAHGNTLENLLLN 245
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P LSDL+GG++ VTL DEEAR R QK++LER+APPTF LIE++ R H +V
Sbjct: 246 PTLSDLVGGIEAVTLSDEEARRRGTQKTVLERRAPPTFDVLIEIQNRDRLAIHMDVATAV 305
Query: 303 DMLLRGK--TPLVEIRKRDDRFNV 324
D LLRG+ P + IR+ D R +
Sbjct: 306 DALLRGRPIPPEIRIREPDGRIRI 329
>gi|374249429|ref|YP_005088648.1| ycf45 gene product [Phaeocystis antarctica]
gi|340008120|gb|AEK26752.1| Ycf45 [Phaeocystis antarctica]
Length = 551
Score = 368 bits (945), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/314 (57%), Positives = 232/314 (73%), Gaps = 3/314 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+I+P ++ L++ KR L+E++LD+GR PEAR+ +YL V ++L+
Sbjct: 7 LNQLLEIVPDFIQGPLKHHPKREILIEIVLDIGRRPEARFAD--STEYLSYRTVVWQDLD 64
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Y +G+F DNRAGIE TLHRIS++R+R+G I+GLTCR+GRAV G + ++ DLL K
Sbjct: 65 YIIKRLGKFSDDNRAGIEKTLHRISSLRNRQGNIIGLTCRIGRAVFGTVSIIRDLLENKK 124
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +G+PGVGKTT +REIARVLSD +KRV+I+DTSNEI GDGD+PH +IG ARRMQV
Sbjct: 125 SILLLGKPGVGKTTAIREIARVLSDGMKKRVIIIDTSNEIAGDGDLPHPSIGKARRMQVS 184
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
QH++MIEAVENHMPE+II+DEIGTE EA A R+IAERGV LIGTAHG LEN+IKN
Sbjct: 185 STKNQHEIMIEAVENHMPEIIIIDEIGTELEATAARTIAERGVQLIGTAHGNALENLIKN 244
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P ++DLIGG+ VTLGDEEA+ R KSILERK PPTF +E+ + WV H SV
Sbjct: 245 PTITDLIGGIQYVTLGDEEAKRRGSAKSILERKTPPTFDIAVEIHDSQTWVIHDNIGNSV 304
Query: 303 DMLLRGKTPLVEIR 316
D+LLRG+ PL++ R
Sbjct: 305 DLLLRGQNPLLQKR 318
>gi|302835702|ref|XP_002949412.1| hypothetical protein VOLCADRAFT_89849 [Volvox carteri f. nagariensis]
gi|300265239|gb|EFJ49431.1| hypothetical protein VOLCADRAFT_89849 [Volvox carteri f. nagariensis]
Length = 2804
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 187/311 (60%), Positives = 232/311 (74%), Gaps = 3/311 (0%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
Q+LPS +R L++ +LLEV++DLGR P AR+ G + L ++ ++LE+A
Sbjct: 2107 QLLPSSVRSALEDHPDMLELLEVVMDLGRPPLARF--PTGDEKLSQQPITADDLEFAVRQ 2164
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VGEFGGDNRAGI+ TLHRIS +R+R G I+GLTCRVGRAV G MV DL+ G SIL +
Sbjct: 2165 VGEFGGDNRAGIDRTLHRISCMRNRTGRIIGLTCRVGRAVKGSALMVRDLVLSGASILLL 2224
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
GRPGVGKTT +RE++R+L+DE KRVVIVDTSNEIGGDGDIPHS IG ARRMQV P Q
Sbjct: 2225 GRPGVGKTTAIREVSRMLADECSKRVVIVDTSNEIGGDGDIPHSGIGRARRMQVAAPEAQ 2284
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
H+VMIEAVENHMP+VI++DEIGT E A R+IA+RGV L+ TAHG LEN+IKNP L+D
Sbjct: 2285 HRVMIEAVENHMPQVIVIDEIGTAEECAAARTIAQRGVQLVATAHGNQLENVIKNPQLAD 2344
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLR 307
L+GG+ +VTLGDEEA+ R QKSILER APPTF IEM ER W H ++VD++L
Sbjct: 2345 LVGGIQSVTLGDEEAKRRGVQKSILERAAPPTFDVCIEMLERTKWRVHLDVGQAVDVVLA 2404
Query: 308 GKTPLVEIRKR 318
G ++R+R
Sbjct: 2405 GGDAGGQVRER 2415
>gi|77166422|ref|YP_344947.1| single-stranded nucleic acid binding R3H [Nitrosococcus oceani ATCC
19707]
gi|254436235|ref|ZP_05049742.1| R3H domain protein [Nitrosococcus oceani AFC27]
gi|76884736|gb|ABA59417.1| Single-stranded nucleic acid binding R3H [Nitrosococcus oceani ATCC
19707]
gi|207089346|gb|EDZ66618.1| R3H domain protein [Nitrosococcus oceani AFC27]
Length = 496
Score = 368 bits (944), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 194/313 (61%), Positives = 231/313 (73%), Gaps = 5/313 (1%)
Query: 1 MNA-FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSV 59
+NA + +LP LR LQ QLLEVI+D+GRLP+AR+ L + VS
Sbjct: 2 LNADLQSLLAVLPPVLRAALQGLPSH-QLLEVIMDVGRLPQARF--SERAVNLATDPVSP 58
Query: 60 EELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL 119
+LE + VGEF DNRAGIEGTLHRI+ +R+R+G I+GLT RVGRAV+G ID + DL+
Sbjct: 59 ADLERVVALVGEFSADNRAGIEGTLHRIACLRNRRGEIIGLTLRVGRAVAGTIDFIQDLI 118
Query: 120 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARR 179
G ++L +GRPGVGKTT +REIARVL+DEF KRVVIVDTSNEIGGDGDIPH AIG+ARR
Sbjct: 119 ERGDNLLLLGRPGVGKTTRLREIARVLADEFGKRVVIVDTSNEIGGDGDIPHPAIGSARR 178
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
MQV P QH VMIEAVENHMPEVIIVDEIGT +EA A R+IAERGV LIGTAHG LEN
Sbjct: 179 MQVSHPEQQHGVMIEAVENHMPEVIIVDEIGTTSEATAARTIAERGVQLIGTAHGNTLEN 238
Query: 240 IIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-T 298
++ NP L+DL+GGV VTLGD+EAR RR QK+I ERKA PTF ++E+ R + H T
Sbjct: 239 LVMNPTLADLVGGVQAVTLGDDEARLRRTQKTIRERKALPTFDAVVEIVNREVMIVHPDT 298
Query: 299 EKSVDMLLRGKTP 311
+VD LLRG P
Sbjct: 299 AGAVDKLLRGLGP 311
>gi|255585357|ref|XP_002533375.1| ATP binding protein, putative [Ricinus communis]
gi|223526782|gb|EEF29006.1| ATP binding protein, putative [Ricinus communis]
Length = 693
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 187/315 (59%), Positives = 238/315 (75%), Gaps = 3/315 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
+F ++LP +R L N ++ G+L+EV+LDLGR P AR+ G + V E+L++A
Sbjct: 101 SFLELLPLRMRRELCNQNEIGELIEVVLDLGRKPLARFPS--GDWVISEQPVKHEDLKHA 158
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VG+F DNR+GI +LHRISAIR+RK I+GLTCRVGRAVSG +++ DL+ G SI
Sbjct: 159 ISKVGDFSDDNRSGINSSLHRISAIRNRKMQIIGLTCRVGRAVSGSAEIIRDLVEGGGSI 218
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT++REIAR+L+D+ KRVVIVDTSNEIGGDGD+PH+ IG ARRMQVP
Sbjct: 219 LAIGPPGVGKTTLIREIARMLADDQGKRVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNV 278
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
++QH VMIEAVENHMP+ II+DEIGTE EA A +IA+RGV L+GTAHG ++NIIKNP
Sbjct: 279 NMQHNVMIEAVENHMPQAIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIIKNPS 338
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDM 304
L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R V H+ + +VD
Sbjct: 339 LQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHHRLDATVDT 398
Query: 305 LLRGKTPLVEIRKRD 319
+L GKTPL EIR D
Sbjct: 399 ILSGKTPLFEIRHMD 413
>gi|359486767|ref|XP_002271948.2| PREDICTED: uncharacterized protein ycf45-like [Vitis vinifera]
Length = 687
Score = 367 bits (942), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 188/326 (57%), Positives = 243/326 (74%), Gaps = 5/326 (1%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTE-VSV 59
++ F +++P +R L ++ G L+EV++DLGR P AR+ G +L S + V +
Sbjct: 94 LSELDMFLELVPLRMRKELFGHAEIGDLIEVVMDLGRKPLARFPS---GDWLISEQIVKL 150
Query: 60 EELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL 119
E+L++A S VGEF DNR+GI +LHRISAIR+RK I+GLTCRVGR+VSG ++V DL+
Sbjct: 151 EDLQHAISKVGEFSDDNRSGINHSLHRISAIRNRKMQIIGLTCRVGRSVSGSAEIVRDLV 210
Query: 120 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARR 179
G SIL +G PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDGD+PHS IG ARR
Sbjct: 211 EGGGSILVIGPPGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSGIGRARR 270
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
MQV ++QH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG ++N
Sbjct: 271 MQVSNVNMQHNVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDN 330
Query: 240 IIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKT 298
I+KNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H V H+
Sbjct: 331 IMKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHCRVHHRL 390
Query: 299 EKSVDMLLRGKTPLVEIRKRDDRFNV 324
+ +VD +L GK+PL E+R D N+
Sbjct: 391 DATVDAILAGKSPLFELRHMDAEANI 416
>gi|307106236|gb|EFN54482.1| hypothetical protein CHLNCDRAFT_135149 [Chlorella variabilis]
Length = 581
Score = 366 bits (940), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 188/321 (58%), Positives = 237/321 (73%), Gaps = 9/321 (2%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
+LP +R +L+ + QLLEV++DLGR P AR+ G G L VS E+L+YA V
Sbjct: 28 LLPPAVRQQLRQHPELPQLLEVVMDLGRPPLARFPG--GDVRLAEAAVSPEDLQYAVRQV 85
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
GEFGGDNRAGI+ TLHRIS IR+R G +VGLTCRVGRA+SG MV DL GKS+L +G
Sbjct: 86 GEFGGDNRAGIDKTLHRISCIRNRAGRVVGLTCRVGRAISGSAAMVADLARDGKSVLLLG 145
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ---VPEPS 186
RPGVGKTT +REI+R+L+DE Q+RVV+VDTSNEIGGDGDIPH IG ARRMQ VP P
Sbjct: 146 RPGVGKTTAIREISRLLADECQRRVVVVDTSNEIGGDGDIPHPGIGGARRMQARAVPHPE 205
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMP I++DEIGTEAE A R+IA+RGV L+ TAHG LEN++KNP L
Sbjct: 206 QQHRVMIEAVENHMPSTIVIDEIGTEAECLAARTIAQRGVQLVATAHGNELENVVKNPSL 265
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLL 306
+DL+GG+ +VTLGD+EA+ R QKS+LER++PPTF +EM R W H + + +L+
Sbjct: 266 NDLVGGIASVTLGDDEAKRRGVQKSVLERQSPPTFDACVEMVSREQWRVH-LDAAPALLV 324
Query: 307 RGKTPLV---EIRKRDDRFNV 324
+T L+ E+R+RD+ V
Sbjct: 325 SHRTVLLRRAEVRERDESGKV 345
>gi|300115498|ref|YP_003762073.1| single-stranded nucleic acid-binding R3H domain-containing protein
[Nitrosococcus watsonii C-113]
gi|299541435|gb|ADJ29752.1| single-stranded nucleic acid binding R3H domain protein
[Nitrosococcus watsonii C-113]
Length = 496
Score = 365 bits (936), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 190/309 (61%), Positives = 227/309 (73%), Gaps = 4/309 (1%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+ +LP LR LQ QLLEVI+D+GR P+AR+ G L + VS +LE
Sbjct: 6 LQSLLAVLPPVLRAALQGLPTH-QLLEVIMDVGRPPQARFSGR--AVNLTTDPVSPADLE 62
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ VGEF DNRAGIEGTLHRI+ +R+R+G I+GLT RVGRA++G ID + DL+
Sbjct: 63 RVVALVGEFSADNRAGIEGTLHRIACLRNRRGEIIGLTLRVGRAIAGTIDFIQDLIEREV 122
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
++L +GRPGVGKTT +REIARVL+DEF KRVVIVDTSNEIGGDGDIPH AIG+ARRMQV
Sbjct: 123 NLLLLGRPGVGKTTRLREIARVLADEFGKRVVIVDTSNEIGGDGDIPHPAIGSARRMQVA 182
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QH VMIEAVENHMPEVI+VDEIGT +EA A R+IAERGV LIGTAHG LEN++ N
Sbjct: 183 HPEQQHGVMIEAVENHMPEVIVVDEIGTTSEAMAARTIAERGVQLIGTAHGNTLENLVMN 242
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P L+DLIGGV VTLGD+EAR RR QK+I ERKA PTF ++E+ R + H T +V
Sbjct: 243 PTLADLIGGVQVVTLGDDEARLRRTQKTIRERKALPTFNAVVEIVNREIMMVHPDTASAV 302
Query: 303 DMLLRGKTP 311
D LLRG P
Sbjct: 303 DKLLRGLDP 311
>gi|148243212|ref|YP_001228369.1| AAA ATPase [Synechococcus sp. RCC307]
gi|147851522|emb|CAK29016.1| AAA ATPase superfamily protein [Synechococcus sp. RCC307]
Length = 470
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 186/318 (58%), Positives = 229/318 (72%), Gaps = 3/318 (0%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE 71
P L+ L +R LLEV+LDLGRLP ARY L VS ++L+ +G
Sbjct: 31 PERLQVCLAAPERRADLLEVVLDLGRLPAARYADRT--DDLGDQPVSSDDLQGVIERLGP 88
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRP 131
FGGDNRAGIE TLHRISA+R+R G ++GLTCRVGRAV G + MV DLL G+S+L +GRP
Sbjct: 89 FGGDNRAGIERTLHRISAVRNRSGCVIGLTCRVGRAVFGTVAMVRDLLDTGESLLLLGRP 148
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 191
GVGKTT +REIARVL+D+ +RV+++DTSNEI GDGDIPH AIG ARR+QV P LQH+V
Sbjct: 149 GVGKTTALREIARVLADDLGRRVMVIDTSNEIAGDGDIPHPAIGRARRLQVARPQLQHRV 208
Query: 192 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
MIEAVENHMPEVI++DEIGTE EA A R+IAERGV L+ TAHG L N+++NP LSDL+G
Sbjct: 209 MIEAVENHMPEVIVIDEIGTEQEAQAARTIAERGVQLVATAHGNALANLVRNPTLSDLVG 268
Query: 252 GVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKT 310
GV VTLGD+EAR R QK++LER A PTF +EM R W+ H +VD LLRG++
Sbjct: 269 GVQAVTLGDDEARRRGSQKAVLERAAEPTFPLAVEMHSRSRWMVHGDVAATVDQLLRGQS 328
Query: 311 PLVEIRKRDDRFNVVVDR 328
E+R +VV+R
Sbjct: 329 SAPEVRSVGPDGVLVVER 346
>gi|118411121|ref|YP_874515.1| hypothetical protein ThpsCp026 [Thalassiosira pseudonana]
gi|224015786|ref|XP_002297541.1| hypothetical protein THAPSDRAFT_bd2063 [Thalassiosira pseudonana
CCMP1335]
gi|116739868|gb|ABK20738.1| conserved hypothetical protein [Thalassiosira pseudonana]
gi|220967805|gb|EED86181.1| hypothetical protein THAPSDRAFT_bd2063 [Thalassiosira pseudonana
CCMP1335]
Length = 454
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 178/325 (54%), Positives = 236/325 (72%), Gaps = 4/325 (1%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVG 70
LP + L + + +L+E++LDLGR PEAR+ G +YL +S ++++Y +
Sbjct: 14 LPFFIYHHLNTHANKEKLIEIVLDLGRRPEARFTT--GPEYLSQKIISWQDIDYMTKRIS 71
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGR 130
+F G+NRAGIE TLHRIS IR+R+ I GLTCRVGRA+ G I ++ DLL GKSIL +GR
Sbjct: 72 KFSGENRAGIERTLHRISCIRNRQFLINGLTCRVGRAIFGTISIIRDLLESGKSILILGR 131
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PGVGKTT++REIARVLSDE +KRV+I+DTSNEI GD D+PHS IG ARRMQVP+ LQHK
Sbjct: 132 PGVGKTTIIREIARVLSDEMEKRVIIIDTSNEIAGDSDVPHSGIGRARRMQVPKTELQHK 191
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+M+EA+ENHMP+VI++DEIGTE EA A R+IAE+GV L+GT HG LEN+IKNP LSDLI
Sbjct: 192 IMLEAIENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENLIKNPSLSDLI 251
Query: 251 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 309
GG+ VT+ DEEA+ R QKSILERK+ P F IE+ W ++ E SVD++LRG
Sbjct: 252 GGIQYVTISDEEAKRRGTQKSILERKSYPAFQLAIEVNSLSSWTIYENVENSVDLILRGN 311
Query: 310 TPLVEIRKRDDRFNVVVDRWKTYDR 334
+ +IR ++++ +K + +
Sbjct: 312 FHIAQIRNLKKNEKLIIN-YKKFQK 335
>gi|298246463|ref|ZP_06970269.1| single-stranded nucleic acid binding R3H domain protein
[Ktedonobacter racemifer DSM 44963]
gi|297553944|gb|EFH87809.1| single-stranded nucleic acid binding R3H domain protein
[Ktedonobacter racemifer DSM 44963]
Length = 607
Score = 363 bits (933), Expect = 5e-98, Method: Compositional matrix adjust.
Identities = 185/316 (58%), Positives = 228/316 (72%), Gaps = 3/316 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
A LP + D + R +LLE+++DLGRL E R+ G L + V+ +LEY
Sbjct: 11 ALLATLPPSIHDAVNRLENRSELLEIVMDLGRLAEGRF--PEGEVLLSNQPVTYADLEYV 68
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
+GEFG DNRAGIE TLHRISA+R+RKG +VGLTCR+GRAV G I ++ D++ G+SI
Sbjct: 69 VERIGEFGDDNRAGIERTLHRISALRNRKGKVVGLTCRIGRAVLGSIALIRDIVEQGQSI 128
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +GRPGVGKTT++REIARVL+DE KRVV+VDTSNEI GDGDIPH IG ARRMQV
Sbjct: 129 LILGRPGVGKTTLLREIARVLADEANKRVVVVDTSNEIAGDGDIPHPGIGRARRMQVART 188
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
QH VMIEAVENHMP+VI++DEIGTE EA A R+IAERGV L+ TAHG L N++ NP
Sbjct: 189 VEQHAVMIEAVENHMPQVIVIDEIGTELEAAAARTIAERGVQLVATAHGNTLGNLLMNPT 248
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDM 304
LSDL+GG+ TVTLGDEEAR R QKSILERKAPPTF ++E + + H+ +VD
Sbjct: 249 LSDLVGGIQTVTLGDEEARRRHTQKSILERKAPPTFDVVVEQQSWEEVIVHRDVADTVDT 308
Query: 305 LLRGKTPLVEIRKRDD 320
+LRG + E R RD+
Sbjct: 309 MLRGMIIVAEERTRDE 324
>gi|118411037|ref|YP_874432.1| hypothetical protein PhtrCp075 [Phaeodactylum tricornutum]
gi|116739784|gb|ABK20655.1| conserved hypothetical protein [Phaeodactylum tricornutum]
Length = 454
Score = 361 bits (927), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 180/308 (58%), Positives = 228/308 (74%), Gaps = 3/308 (0%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVG 70
LP+ LR+ L + QL+E++LDLGR PEAR++ G +YL +S ++++Y V
Sbjct: 14 LPAFLREHLNQHDSKDQLIEIVLDLGRRPEARFIT--GPQYLSQKIISWQDIDYMTKRVS 71
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGR 130
+F +NRAGIE TLHRIS IR+R+ I GLTCRVGRAV G I + DLL KSIL +G+
Sbjct: 72 KFSNENRAGIERTLHRISCIRNRQFLINGLTCRVGRAVFGTISAIRDLLESEKSILILGK 131
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PGVGKTT++REIARVL+DE +KRV+I+DTSNEI GD DIPHS IG ARRMQV + LQH+
Sbjct: 132 PGVGKTTIIREIARVLADEMEKRVIIIDTSNEIAGDSDIPHSGIGRARRMQVAKTELQHQ 191
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT HG L+N+IKNP L+DLI
Sbjct: 192 VMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNCLDNLIKNPSLADLI 251
Query: 251 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK-SVDMLLRGK 309
GG+ VTL D+EA+ R QKSILERKA P F +IE+ + W H+ K SVD+ LRG
Sbjct: 252 GGIQYVTLSDDEAKRRGTQKSILERKAYPAFEIIIEINNQSSWTIHEDVKTSVDLFLRGS 311
Query: 310 TPLVEIRK 317
+ +IR+
Sbjct: 312 FFVGQIRQ 319
>gi|330850845|ref|YP_004376595.1| hypothetical protein FispC_p030 [Fistulifera sp. JPCC DA0580]
gi|328835665|dbj|BAK18961.1| conserved hypothetical protein [Fistulifera sp. JPCC DA0580]
Length = 456
Score = 361 bits (926), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 182/318 (57%), Positives = 232/318 (72%), Gaps = 3/318 (0%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVG 70
LP L++ L + QL+E++LDLGR PEAR++ G +YL +S ++++Y +
Sbjct: 14 LPVFLQEHLNQHPNKEQLIEIVLDLGRRPEARFVS--GPEYLSQKIISWQDIDYVTKRIS 71
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGR 130
+F +NRAGIE TLHRIS IR+R+ I GLTCRVGRAV G I ++ DLL GKSIL +G+
Sbjct: 72 KFSNENRAGIERTLHRISCIRNRQFLINGLTCRVGRAVFGTISIIRDLLESGKSILILGK 131
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PGVGKTT++REIARVL DE +KRV+I+DTSNEI GD DIPHS IG ARRMQV + LQH+
Sbjct: 132 PGVGKTTIIREIARVLGDEMEKRVIIIDTSNEIAGDSDIPHSGIGRARRMQVAKTELQHQ 191
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT HG LEN+IKNP L+DLI
Sbjct: 192 VMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNCLENLIKNPPLADLI 251
Query: 251 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK-SVDMLLRGK 309
GG+ VTL DEEA+ R QKSILERKA P F +IE+ ++ W H+ K SVD LRG
Sbjct: 252 GGIQYVTLSDEEAKRRGTQKSILERKAYPAFEIIIEINDQTSWTIHEDVKDSVDSFLRGS 311
Query: 310 TPLVEIRKRDDRFNVVVD 327
+ +IR+ V+++
Sbjct: 312 FLVGQIRQLSLNEKVIIN 329
>gi|358346746|ref|XP_003637426.1| ATPase-like protein, partial [Medicago truncatula]
gi|355503361|gb|AES84564.1| ATPase-like protein, partial [Medicago truncatula]
Length = 493
Score = 360 bits (925), Expect = 4e-97, Method: Compositional matrix adjust.
Identities = 183/321 (57%), Positives = 239/321 (74%), Gaps = 3/321 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
F ++LP ++R L + G L+EV++DLGR P AR+ G + ++ ++L +A
Sbjct: 89 FLELLPLEMRMELYRHQEIGGLIEVVMDLGRKPLARFPS--GDWVISQRPINHDDLRHAI 146
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S VGEF DNR+GI+ +LHRISAIR+R+ I+GLTCRVGRAVSG +++DL+ G SIL
Sbjct: 147 SKVGEFSDDNRSGIDSSLHRISAIRNRQMQIIGLTCRVGRAVSGSAKIIHDLVEGGGSIL 206
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G PGVGKTT++RE AR+L+DEF KRVVIVDTSNEIGGDGD+PH+ IG ARRMQVP +
Sbjct: 207 VIGPPGVGKTTLIRETARMLADEFLKRVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVN 266
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QH +MIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG +E+I+KNP L
Sbjct: 267 MQHSIMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGTTIESIMKNPYL 326
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDML 305
L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM + V H+ + +VD L
Sbjct: 327 QILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISKTECRVHHRLDATVDAL 386
Query: 306 LRGKTPLVEIRKRDDRFNVVV 326
L GK P+ E+R DD N +V
Sbjct: 387 LAGKPPVFEVRHWDDFSNDLV 407
>gi|218199218|gb|EEC81645.1| hypothetical protein OsI_25180 [Oryza sativa Indica Group]
Length = 682
Score = 360 bits (924), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 183/315 (58%), Positives = 236/315 (74%), Gaps = 3/315 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
AF +++P+ +R L + +L+EV++DLGR P AR+ G + V+ ++L A
Sbjct: 69 AFLEVVPARMRRGLARHPEVRELVEVVMDLGRRPLARFPS--GDWVISEQAVTADDLHQA 126
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VG+F DNR+GI +LHRISAIR+RK I+GLTCRVGRA+SG +M+ DL+ G SI
Sbjct: 127 VSKVGDFSEDNRSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGSI 186
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG +RRMQVP+
Sbjct: 187 LVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKV 246
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
S+QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP
Sbjct: 247 SMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKNPC 306
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDM 304
L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V HK E +VD
Sbjct: 307 LQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLEATVDA 366
Query: 305 LLRGKTPLVEIRKRD 319
+L GK P E RK D
Sbjct: 367 ILAGKPPKFEARKMD 381
>gi|356575518|ref|XP_003555887.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 667
Score = 360 bits (924), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 182/299 (60%), Positives = 229/299 (76%), Gaps = 3/299 (1%)
Query: 26 GQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLH 85
G L+E+++DLGR P AR+ G + ++ E+L +A S VGEF DNR+GI+ +LH
Sbjct: 95 GGLIEIVMDLGRKPLARFPS--GDWVISEQPIAQEDLRHAISKVGEFSDDNRSGIDRSLH 152
Query: 86 RISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARV 145
RISAIR+RK I+GLTCRVGRAV G +++ DL+ G SIL +G PGVGKTT++REIAR+
Sbjct: 153 RISAIRNRKMQIIGLTCRVGRAVGGSAEIIRDLVEDGGSILVIGPPGVGKTTLIREIARM 212
Query: 146 LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
L+DEF+KRVVIVDTSNEIGGDGD+PH+ IG ARRMQVP ++QH VMIEAVENHMPE II
Sbjct: 213 LADEFRKRVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHNVMIEAVENHMPETII 272
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARA 265
+DEIGTE EA A +IA+RGV L+GTAHG +ENIIKNP L L+GG+++VTLGDEEAR
Sbjct: 273 IDEIGTELEALAASTIAQRGVQLVGTAHGMTIENIIKNPYLQILVGGIESVTLGDEEARK 332
Query: 266 RRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFN 323
R+ QK+ILERK PPTF +EM + V H+ + +VD +L GK PL EIR+ DD N
Sbjct: 333 RKVQKTILERKGPPTFSCAVEMISKTECRVHHRLDATVDAILAGKPPLFEIRQWDDSDN 391
>gi|168013314|ref|XP_001759346.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689659|gb|EDQ76030.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 546
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/301 (60%), Positives = 228/301 (75%), Gaps = 3/301 (0%)
Query: 33 LDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRS 92
LDLGR P AR+ G Y+ ++V+ ++L++A S GEFG DNRAGI+ TLHR+SA+R+
Sbjct: 1 LDLGRRPLARF--PSGDWYVSESKVTAQDLQHAISMTGEFGDDNRAGIDRTLHRVSAMRT 58
Query: 93 RKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
R G++VGLTCRVGRA+SG +MV DL+ S+L +G PGVGKTT +REIAR+L+DE+ K
Sbjct: 59 RSGSVVGLTCRVGRAISGSAEMVRDLIASSSSLLLMGPPGVGKTTAIREIARMLADEYHK 118
Query: 153 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 212
RVVIVDTSNEI GDGDIPH+ IG ARRMQVP+ LQHKVMIEAVENHMP+VI++DEIGTE
Sbjct: 119 RVVIVDTSNEIAGDGDIPHAGIGMARRMQVPKVDLQHKVMIEAVENHMPQVIVIDEIGTE 178
Query: 213 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 272
EA A +IA+RGV L+GTAHG +EN+IKNP L +L GG+ +VTLGDEEAR RR QKS+
Sbjct: 179 LEAVAAGTIAQRGVQLVGTAHGMTVENLIKNPSLQNLAGGIQSVTLGDEEARRRRVQKSV 238
Query: 273 LERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKT 331
LER+ PP F EM R W H++ +VD LL GK+P VE+RK ++ VVV
Sbjct: 239 LERQGPPVFTSACEMISRTEWRVHRSLAATVDALLAGKSPRVEVRKMNENGQVVVGNLAE 298
Query: 332 Y 332
Y
Sbjct: 299 Y 299
>gi|224109840|ref|XP_002315329.1| predicted protein [Populus trichocarpa]
gi|222864369|gb|EEF01500.1| predicted protein [Populus trichocarpa]
Length = 542
Score = 359 bits (921), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 182/296 (61%), Positives = 231/296 (78%), Gaps = 5/296 (1%)
Query: 26 GQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTL 84
G+L+EV+LDLGR P AR+ G+F + V E+L++A S VG+F DNR+GI+ +L
Sbjct: 120 GELIEVVLDLGRKPIARFPSGDF---VICEQPVRHEDLKHAISKVGDFSDDNRSGIDSSL 176
Query: 85 HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIAR 144
HRISAIR+RK I+GLTCRVGRAVSG +++ DL+ G SIL +GRPGVGKTT++REIAR
Sbjct: 177 HRISAIRNRKMQIIGLTCRVGRAVSGSAEIIRDLVEGGSSILVIGRPGVGKTTLIREIAR 236
Query: 145 VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 204
+L+D+ +KRVVIVDTSNEIGGDGD+PH+ IG ARRMQVP ++QH +MIEAVENHMPE I
Sbjct: 237 MLADDQRKRVVIVDTSNEIGGDGDVPHAGIGRARRMQVPNVNMQHNIMIEAVENHMPETI 296
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEAR 264
I+DEIGTE EA A +IA+RGV L+GTAHG ++NIIKNP L L+GG+++VTLGDEEAR
Sbjct: 297 IIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDNIIKNPSLQILVGGIESVTLGDEEAR 356
Query: 265 ARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGKTPLVEIRKRD 319
R+ QK+ILERK PPTF +EM R V H+ + +VD +L GK+PL EIR D
Sbjct: 357 KRKVQKTILERKGPPTFTCAVEMITRTECRVHHRLDATVDAILAGKSPLFEIRHVD 412
>gi|255090003|ref|XP_002506923.1| predicted protein [Micromonas sp. RCC299]
gi|226522196|gb|ACO68181.1| predicted protein [Micromonas sp. RCC299]
Length = 624
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/317 (58%), Positives = 231/317 (72%), Gaps = 6/317 (1%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLG--EFGGKYLRSTEVSVEELE 63
A +LP +R L ++ QLLEV+LDLGRLP AR+ E G L + +++E
Sbjct: 33 ALIDLLPPRVRGALATHQRKLQLLEVVLDLGRLPIARFADGDEILGDGL---PLDYDDIE 89
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
A VGE GGDNRAGI TLHRIS IR+RKG +VGLT RVGRA+ G D+V DLL G
Sbjct: 90 RAMDTVGEVGGDNRAGINRTLHRISVIRNRKGGVVGLTARVGRAIEGSADLVRDLLASGA 149
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPGVGKTT +REI+R+LS+E+ +RVV+VDTSNEIGGDGDIPH IG +RRMQVP
Sbjct: 150 SVLLLGRPGVGKTTAIREISRILSEEYGRRVVVVDTSNEIGGDGDIPHPGIGGSRRMQVP 209
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QH V+IEAV+NH P+V+IVDEIGTE EA A R+I++RGV +I TAHG LEN++KN
Sbjct: 210 VPDRQHDVLIEAVQNHTPQVVIVDEIGTELEAKAARTISQRGVQMIATAHGHTLENLLKN 269
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P+L+DL+GGV +VTLGD+EAR RR QKS+LER+ PPTF +EM + +W H +V
Sbjct: 270 PLLNDLVGGVVSVTLGDDEARRRRVQKSVLEREGPPTFGAAVEMVDIGHWRVHLDVGVAV 329
Query: 303 DMLLRGKTPLVEIRKRD 319
D LL G P VE+R D
Sbjct: 330 DTLLAGYAPHVELRTLD 346
>gi|414591924|tpg|DAA42495.1| TPA: hypothetical protein ZEAMMB73_459348 [Zea mays]
Length = 696
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 236/317 (74%), Gaps = 3/317 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
AF +I+P+ +R L + L+EVI+DLGR P AR+ G + V+ ++L A
Sbjct: 83 AFLEIVPARMRRGLARHQELRDLVEVIMDLGRRPIARFPS--GDWAISDQPVTADDLRQA 140
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
+ VG+F DNR+GI +LHRISAIR+RK I+GLTCRVGRA+SG +M+ DL+ G SI
Sbjct: 141 VAKVGDFSEDNRSGINHSLHRISAIRNRKAQIIGLTCRVGRAISGSAEMIRDLVVSGGSI 200
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG ARRMQVP+
Sbjct: 201 LVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRARRMQVPKV 260
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP
Sbjct: 261 TMQHNVMIEAVENHMPEVIVIDEIGTELEAMAATTIAQRGVQLVGTAHGVTIESIIKNPC 320
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDM 304
L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V H+ + +VD
Sbjct: 321 LQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFLCAVEMISKTECRVHHRLDATVDA 380
Query: 305 LLRGKTPLVEIRKRDDR 321
+L GK P E RK ++
Sbjct: 381 ILAGKPPKFEARKMHNK 397
>gi|357111296|ref|XP_003557450.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 707
Score = 357 bits (916), Expect = 4e-96, Method: Compositional matrix adjust.
Identities = 181/317 (57%), Positives = 235/317 (74%), Gaps = 3/317 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
AF +++P+ +R L + +L+EV++DLGR P AR+ G + V+ ++L A
Sbjct: 92 AFLEVVPARMRRDLAMHPEVRELVEVVMDLGRRPLARFPS--GDWVISDQPVTADDLRQA 149
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VG F DNR+GI +LHRISAIR+RK I+GLTCRVGRA+SG +M+ DL+ G SI
Sbjct: 150 VSKVGNFSEDNRSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGSI 209
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG +RRMQVP+
Sbjct: 210 LVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKV 269
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP
Sbjct: 270 TMQHNVMIEAVENHMPEVIVIDEIGTELEALAASTIAQRGVQLVGTAHGVTIESIIKNPC 329
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDM 304
L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V HK E +VD
Sbjct: 330 LQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMVSKTECRVHHKLETTVDA 389
Query: 305 LLRGKTPLVEIRKRDDR 321
+L GK P E R D +
Sbjct: 390 ILAGKPPKFEARVMDSK 406
>gi|449465306|ref|XP_004150369.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
gi|449513026|ref|XP_004164207.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
Length = 733
Score = 357 bits (915), Expect = 5e-96, Method: Compositional matrix adjust.
Identities = 180/318 (56%), Positives = 239/318 (75%), Gaps = 3/318 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
F ++LPS +R L++ ++ +L+EV+LDLGR P AR+ G + V E+L +A
Sbjct: 114 FIELLPSRMRKELRSHTEFRELIEVVLDLGRNPIARFPS--GDWPISEEPVKHEDLSHAI 171
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ VG+F DNR+G++ +LHRISAIR+RK I+GLTCRVGR++SG +++ DL+ G SIL
Sbjct: 172 AKVGDFSDDNRSGMDRSLHRISAIRNRKMQIIGLTCRVGRSISGSAEIIRDLVEGGGSIL 231
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G PGVGKTT++REIAR+L+D+ +KRVVIVDTSNEIGGDGD+PH+ IG+ARRMQVP +
Sbjct: 232 VIGPPGVGKTTLIREIARMLADDHKKRVVIVDTSNEIGGDGDVPHAGIGSARRMQVPNVN 291
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG ++NIIKNP L
Sbjct: 292 MQHTVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGITIDNIIKNPSL 351
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDML 305
L+GG+++VTLGDEEAR R+ QK+ILERK P TF +EM + V H+ + +VD +
Sbjct: 352 QILVGGIESVTLGDEEARKRKVQKTILERKGPSTFTCAVEMISKTECRVHHRLDTTVDAI 411
Query: 306 LRGKTPLVEIRKRDDRFN 323
L GK PL E+R D N
Sbjct: 412 LAGKPPLFEVRHVDTYAN 429
>gi|125554146|gb|EAY99751.1| hypothetical protein OsI_21736 [Oryza sativa Indica Group]
Length = 582
Score = 356 bits (914), Expect = 8e-96, Method: Compositional matrix adjust.
Identities = 179/313 (57%), Positives = 233/313 (74%), Gaps = 5/313 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYA 65
++LP +LR R++ + L+EV++DLGR P AR+ G+F L + +S ++L +A
Sbjct: 4 LLELLPGELRRRVEGHPELPALVEVVMDLGRPPLARFPSGDF---LLSQSPISFDDLRHA 60
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VG+FG DNRAGI TLHRISAIR+RKGAI+GLTCRVGRAV G +++ DL+ G S+
Sbjct: 61 TSQVGDFGADNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVPGSANLLQDLVKDGGSL 120
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP
Sbjct: 121 LLIGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQ 180
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP
Sbjct: 181 DMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPS 240
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDM 304
L L+GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD
Sbjct: 241 LDMLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDA 300
Query: 305 LLRGKTPLVEIRK 317
LL GK P VEIRK
Sbjct: 301 LLAGKMPNVEIRK 313
>gi|378824540|ref|YP_005089710.1| ycf45 gene product (chloroplast) [Synedra acus]
gi|371572739|gb|AEX37835.1| hypothetical protein (chloroplast) [Synedra acus]
Length = 448
Score = 356 bits (913), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 175/311 (56%), Positives = 231/311 (74%), Gaps = 3/311 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
++ LP L D L QL+E++LDLGR PEAR+ G +YL +S ++L+Y
Sbjct: 8 LFEKLPFFLYDHLVKHMYADQLIEIVLDLGRRPEARF--PTGPEYLSQKVISWQDLDYTT 65
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ +F +NRAGIE TLHRIS IR+R+ I GLTCRVGR++ G I ++ DLL G+SIL
Sbjct: 66 KRISKFSTENRAGIERTLHRISCIRNRQFLITGLTCRVGRSIFGAISVIRDLLESGQSIL 125
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G+PGVGKTT++REI RVL+DE +KRVV++DTSNEI G+ DIPHS IG ARRMQV +
Sbjct: 126 ILGKPGVGKTTIIREIGRVLADEMEKRVVVIDTSNEIAGESDIPHSGIGRARRMQVAKTE 185
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQH+VMIEAVENHMP+VII+DEIGTE E A R+IAE+GV L+GT HG L+N+IKNP L
Sbjct: 186 LQHQVMIEAVENHMPQVIIIDEIGTELEVLAARTIAEKGVQLVGTTHGNCLQNLIKNPPL 245
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK-SVDML 305
+DLIGG+ VTL D+EA+ R+ QK++LERKA P F LIE+ +++ W H+ K S+D+L
Sbjct: 246 ADLIGGIQYVTLSDDEAKRRKTQKTVLERKAYPAFEILIEINQQNSWTIHEDVKTSIDLL 305
Query: 306 LRGKTPLVEIR 316
LRG + + +IR
Sbjct: 306 LRGDSFMEQIR 316
>gi|315320527|ref|YP_004072583.1| putative Ycf45 [Thalassiosira oceanica CCMP1005]
gi|283569000|gb|ADB27537.1| putative Ycf45 [Thalassiosira oceanica CCMP1005]
Length = 452
Score = 356 bits (913), Expect = 9e-96, Method: Compositional matrix adjust.
Identities = 171/323 (52%), Positives = 236/323 (73%), Gaps = 5/323 (1%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVG 70
LP + + N S + +L+E++LDLGR PEAR+ G +YL +S ++++Y +
Sbjct: 14 LPFFIYQHVHNHSNKEKLIEIVLDLGRRPEARFTT--GPEYLSQKVISWQDIDYTTRRIS 71
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGR 130
+F G+NRAGIE TLHRIS IR+R+ I GLTCRVGRA+ G I ++ DLL KSIL +G+
Sbjct: 72 KFSGENRAGIERTLHRISCIRNRQFLINGLTCRVGRAIFGTISIIRDLLESRKSILILGK 131
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PGVGKTT++REIAR+LSDE +KRV+I+DTSNEI GD D+PH+ IG ARRMQV + LQHK
Sbjct: 132 PGVGKTTIIREIARILSDEMEKRVIIIDTSNEIAGDSDVPHNGIGRARRMQVAKTELQHK 191
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+M+EA+ENHMP+VI++DEIGTE EA A R+IAE+GV L+GT HG LEN+IKNP LSDL+
Sbjct: 192 IMLEAIENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENLIKNPSLSDLV 251
Query: 251 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 309
GG+ VT+ DEEA+ R QKSILERK+ P F +E+ + W H+ E SVD++LR
Sbjct: 252 GGIQYVTISDEEAKRRGTQKSILERKSYPAFQLAVEVNNVYSWTIHENVENSVDLILRDN 311
Query: 310 TPLVEIR--KRDDRFNVVVDRWK 330
+++ R K++++ ++ + +
Sbjct: 312 FTILQTRSIKKNEKLSITYKKLQ 334
>gi|125596098|gb|EAZ35878.1| hypothetical protein OsJ_20178 [Oryza sativa Japonica Group]
Length = 581
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 179/313 (57%), Positives = 233/313 (74%), Gaps = 5/313 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYA 65
++LP +LR R++ + L+EV++DLGR P AR+ G+F L + +S ++L +A
Sbjct: 4 LLELLPGELRRRVEGHPELPALVEVVMDLGRPPLARFPSGDF---LLSQSPISFDDLRHA 60
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VG+FG DNRAGI TLHRISAIR+RKGAI+GLTCRVGRAV G +++ DL+ G S+
Sbjct: 61 TSQVGDFGADNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVPGSANLLQDLVKDGGSL 120
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP
Sbjct: 121 LLIGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQ 180
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP
Sbjct: 181 DMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPS 240
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDM 304
L L+GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD
Sbjct: 241 LDMLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDA 300
Query: 305 LLRGKTPLVEIRK 317
LL GK P VEIRK
Sbjct: 301 LLAGKMPNVEIRK 313
>gi|297829570|ref|XP_002882667.1| hypothetical protein ARALYDRAFT_897221 [Arabidopsis lyrata subsp.
lyrata]
gi|297328507|gb|EFH58926.1| hypothetical protein ARALYDRAFT_897221 [Arabidopsis lyrata subsp.
lyrata]
Length = 688
Score = 356 bits (913), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 184/315 (58%), Positives = 231/315 (73%), Gaps = 3/315 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
AF +ILP R L +L+EV++DLGR P AR+ G + V+ ++LE
Sbjct: 101 LDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPS--GDWVISEQPVTHQDLE 158
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
A S VG+F DNR+GI+ +LHRISAIR+RK ++GLTCRVGR VSG +++ DL+ G
Sbjct: 159 LAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGGG 218
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +G PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP
Sbjct: 219 SILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVP 278
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
+LQH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKN
Sbjct: 279 NVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKN 338
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P L LIGG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H + + +V
Sbjct: 339 PSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTV 398
Query: 303 DMLLRGKTPLVEIRK 317
D +L GK+ L EIR+
Sbjct: 399 DAILAGKSALFEIRQ 413
>gi|242047690|ref|XP_002461591.1| hypothetical protein SORBIDRAFT_02g005070 [Sorghum bicolor]
gi|241924968|gb|EER98112.1| hypothetical protein SORBIDRAFT_02g005070 [Sorghum bicolor]
Length = 628
Score = 355 bits (911), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 181/318 (56%), Positives = 239/318 (75%), Gaps = 5/318 (1%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEV-SVEELEY 64
AF +++P+ +R L + L+EV++DLGR P AR+ G ++ S +V + ++L
Sbjct: 15 AFLEVVPARMRRGLALHQEVRHLVEVVMDLGRRPIARFPS---GDWVISDQVVTADDLLQ 71
Query: 65 AQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS 124
A + VG+F DNR+GI +LHRISAIR+RK I+GLTCRVGRA+SG +M+ DL+ G S
Sbjct: 72 AVAKVGDFSEDNRSGINHSLHRISAIRNRKAQIIGLTCRVGRAISGSAEMIRDLVVGGGS 131
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
IL +G PGVGKTT++REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG ARRMQVP+
Sbjct: 132 ILVIGPPGVGKTTLIREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRARRMQVPK 191
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP
Sbjct: 192 VTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKNP 251
Query: 245 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVD 303
L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V HK + +VD
Sbjct: 252 CLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHHKLDATVD 311
Query: 304 MLLRGKTPLVEIRKRDDR 321
+L GK P E RK ++
Sbjct: 312 AILAGKPPKFEARKMHNK 329
>gi|115466506|ref|NP_001056852.1| Os06g0155600 [Oryza sativa Japonica Group]
gi|55296694|dbj|BAD69412.1| ATPase-like [Oryza sativa Japonica Group]
gi|55297449|dbj|BAD69300.1| ATPase-like [Oryza sativa Japonica Group]
gi|113594892|dbj|BAF18766.1| Os06g0155600 [Oryza sativa Japonica Group]
Length = 643
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 179/313 (57%), Positives = 233/313 (74%), Gaps = 5/313 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYL-GEFGGKYLRSTEVSVEELEYA 65
++LP +LR R++ + L+EV++DLGR P AR+ G+F L + +S ++L +A
Sbjct: 66 LLELLPGELRRRVEGHPELPALVEVVMDLGRPPLARFPSGDF---LLSQSPISFDDLRHA 122
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VG+FG DNRAGI TLHRISAIR+RKGAI+GLTCRVGRAV G +++ DL+ G S+
Sbjct: 123 TSQVGDFGADNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAVPGSANLLQDLVKDGGSL 182
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP
Sbjct: 183 LLIGPPGVGKTTVIREIARMLADDYRKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQ 242
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+QHKV+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP
Sbjct: 243 DMQHKVLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIMNPS 302
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDM 304
L L+GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD
Sbjct: 303 LDMLVGGVQSVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKIELRVHRSLEDTVDA 362
Query: 305 LLRGKTPLVEIRK 317
LL GK P VEIRK
Sbjct: 363 LLAGKMPNVEIRK 375
>gi|449523614|ref|XP_004168818.1| PREDICTED: uncharacterized protein ycf45-like, partial [Cucumis
sativus]
Length = 640
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 237/310 (76%), Gaps = 5/310 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYAQSA 68
+LP ++R R++ + QL+EV+LDLGR P AR+ G+F L + V+V++L +A S
Sbjct: 58 LLPEEMRRRIREHEECHQLIEVVLDLGRKPLARFPTGDF---LLSDSLVTVDDLRHATSK 114
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VG+F DNRAGI TLHRISAIR+RKG I+GLTCRVGRA+SG ++ DL+ G S+L +
Sbjct: 115 VGDFAIDNRAGISRTLHRISAIRNRKGVIIGLTCRVGRAISGSAILLRDLIQDGASLLLI 174
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
G PGVGKTT++REIAR+L+++F+KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP+ +Q
Sbjct: 175 GPPGVGKTTIIREIARILANDFKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPDSDMQ 234
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
HKV+IEAVENHMP+VII+DEI T+ EA A +IA+RG+ L+ TAHG +EN+I NP+L
Sbjct: 235 HKVLIEAVENHMPQVIIIDEISTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPLLEM 294
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLR 307
L+GG+ +VTLGDEEA RR QK++LERK P TF +E+ + H++ + +VD +L
Sbjct: 295 LVGGIQSVTLGDEEASRRRVQKTVLERKGPSTFACGVEIISKTELRVHRSLDATVDAVLC 354
Query: 308 GKTPLVEIRK 317
G+ P VE+RK
Sbjct: 355 GRYPNVEVRK 364
>gi|449456721|ref|XP_004146097.1| PREDICTED: uncharacterized protein ycf45-like [Cucumis sativus]
Length = 644
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 176/310 (56%), Positives = 237/310 (76%), Gaps = 5/310 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYAQSA 68
+LP ++R R++ + QL+EV+LDLGR P AR+ G+F L + V+V++L +A S
Sbjct: 62 LLPEEMRRRIREHEECHQLIEVVLDLGRKPLARFPTGDF---LLSDSLVTVDDLRHATSK 118
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VG+F DNRAGI TLHRISAIR+RKG I+GLTCRVGRA+SG ++ DL+ G S+L +
Sbjct: 119 VGDFAIDNRAGISRTLHRISAIRNRKGVIIGLTCRVGRAISGSAILLRDLIQDGASLLLI 178
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
G PGVGKTT++REIAR+L+++F+KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP+ +Q
Sbjct: 179 GPPGVGKTTIIREIARILANDFKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPDSDMQ 238
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
HKV+IEAVENHMP+VII+DEI T+ EA A +IA+RG+ L+ TAHG +EN+I NP+L
Sbjct: 239 HKVLIEAVENHMPQVIIIDEISTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPLLEM 298
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLR 307
L+GG+ +VTLGDEEA RR QK++LERK P TF +E+ + H++ + +VD +L
Sbjct: 299 LVGGIQSVTLGDEEASRRRVQKTVLERKGPSTFACGVEIISKTELRVHRSLDATVDAVLC 358
Query: 308 GKTPLVEIRK 317
G+ P VE+RK
Sbjct: 359 GRYPNVEVRK 368
>gi|30681308|ref|NP_566373.2| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
gi|332641382|gb|AEE74903.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
Length = 684
Score = 354 bits (909), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 183/315 (58%), Positives = 230/315 (73%), Gaps = 3/315 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
AF +ILP R L +L+EV++DLGR P AR+ G + V+ ++LE
Sbjct: 97 LDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPS--GDWVISEQPVTHQDLE 154
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
A S VG+F DNR+GI+ +LHRISAIR+RK ++GLTCRVGR VSG +++ DL+ G
Sbjct: 155 LAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGGG 214
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +G PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP
Sbjct: 215 SILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVP 274
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
+LQH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKN
Sbjct: 275 NVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKN 334
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P L LIGG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H + + +V
Sbjct: 335 PSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTV 394
Query: 303 DMLLRGKTPLVEIRK 317
D +L GK+ EIR+
Sbjct: 395 DAILAGKSAPFEIRQ 409
>gi|11467491|ref|NP_043637.1| ORF455 [Odontella sinensis]
gi|1351772|sp|P49540.1|YCF45_ODOSI RecName: Full=Uncharacterized protein ycf45; AltName: Full=ORF455
gi|1185186|emb|CAA91669.1| ORF455, homologous to Porphyra ORF565 [Odontella sinensis]
Length = 455
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 175/308 (56%), Positives = 224/308 (72%), Gaps = 3/308 (0%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVG 70
LP +R + + +L+E+++DLGR PEAR+ G +YL +S +++ + +
Sbjct: 14 LPFLIRQNINQHPSKQKLIEIVIDLGRRPEARFTT--GPEYLSQKVISWQDINHFTKRIS 71
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGR 130
+F DNRAGIE TLHRIS IR+R+ I GLTCR+GRA+ G I V DLL +SIL +G+
Sbjct: 72 KFSNDNRAGIERTLHRISCIRNRQFLINGLTCRIGRAIFGTISSVRDLLESQQSILLLGK 131
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PGVGKTT++REIARVLSDE +KRVVIVDTSNEI GD DIPHSAIG ARRMQV LQH+
Sbjct: 132 PGVGKTTIIREIARVLSDEMEKRVVIVDTSNEIAGDSDIPHSAIGRARRMQVATTDLQHQ 191
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+MIEAVENHMP+VI++DEIGTE EA A R+IAE+GV L+GT HG LEN+IKNP LSDLI
Sbjct: 192 IMIEAVENHMPQVIVIDEIGTELEALAARTIAEKGVQLVGTTHGNCLENLIKNPPLSDLI 251
Query: 251 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEK-SVDMLLRGK 309
GG+ +VTL D+EA+ R QKSI+ERKA P F IE+ + W H+ K S+D+LLR
Sbjct: 252 GGIQSVTLSDDEAKRRGTQKSIIERKAYPAFQIAIEINTENSWTIHEDIKSSIDLLLRKS 311
Query: 310 TPLVEIRK 317
++R+
Sbjct: 312 FTGTQVRE 319
>gi|33146924|dbj|BAC79945.1| ATPase-like protein [Oryza sativa Japonica Group]
gi|50509453|dbj|BAD31071.1| ATPase-like protein [Oryza sativa Japonica Group]
Length = 707
Score = 353 bits (906), Expect = 6e-95, Method: Compositional matrix adjust.
Identities = 183/323 (56%), Positives = 236/323 (73%), Gaps = 11/323 (3%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
AF +++P+ +R L + +L+EV++DLGR P AR+ G + V+ ++L A
Sbjct: 86 AFLEVVPARMRRGLARHPEVRELVEVVMDLGRRPLARFPS--GDWVISEQAVTADDLHQA 143
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VG+F DNR+GI +LHRISAIR+RK I+GLTCRVGRA+SG +M+ DL+ G SI
Sbjct: 144 VSKVGDFSEDNRSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGSI 203
Query: 126 LFVGRPGVGKTTVM--------REIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 177
L +G PGVGKTT++ REIAR+L+DE +KRV+IVDTSNEIGGDGD+PHS IG +
Sbjct: 204 LVIGPPGVGKTTLISLRCFQQYREIARILADEGKKRVIIVDTSNEIGGDGDVPHSGIGRS 263
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RRMQVP+ S+QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +
Sbjct: 264 RRMQVPKVSMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTI 323
Query: 238 ENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTH 296
E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V H
Sbjct: 324 ESIIKNPCLQVLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMISKTECRVHH 383
Query: 297 KTEKSVDMLLRGKTPLVEIRKRD 319
K E +VD +L GK P E RK D
Sbjct: 384 KLEATVDAILAGKPPKFEARKMD 406
>gi|356514603|ref|XP_003525995.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 651
Score = 353 bits (905), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 173/316 (54%), Positives = 236/316 (74%), Gaps = 5/316 (1%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEEL 62
G +LP ++R R+ + + QL+EV++DLGR P AR+ G+F + ++V+++
Sbjct: 68 LGRLLALLPEEMRRRVSDHPELPQLIEVVMDLGRKPLARFPTGDF---VISEYPITVQDI 124
Query: 63 EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG 122
E+A + VG+F DNRAGI TLHRISAIR+RKG I+GLTCRVGRA+SG ++ DL+ G
Sbjct: 125 EHATAQVGDFAIDNRAGISRTLHRISAIRNRKGTIIGLTCRVGRAISGSAKLLQDLIQDG 184
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
S+L +G PGVGKTT++REIAR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQV
Sbjct: 185 ASLLLIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQV 244
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
P +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I
Sbjct: 245 PNSDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLIM 304
Query: 243 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKS 301
NP L L+GG+ +VTLGDEEA R QK++LERK P TF +E+ + H++ E +
Sbjct: 305 NPSLEMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELRIHRSLEAT 364
Query: 302 VDMLLRGKTPLVEIRK 317
VD +L G+ P VEIRK
Sbjct: 365 VDAILSGRFPNVEIRK 380
>gi|222636577|gb|EEE66709.1| hypothetical protein OsJ_23378 [Oryza sativa Japonica Group]
Length = 605
Score = 353 bits (905), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 178/294 (60%), Positives = 225/294 (76%), Gaps = 3/294 (1%)
Query: 27 QLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHR 86
+L+EV++DLGR P AR+ G + V+ ++L A S VG+F DNR+GI +LHR
Sbjct: 13 ELVEVVMDLGRRPLARFPS--GDWVISEQAVTADDLHQAVSKVGDFSEDNRSGINHSLHR 70
Query: 87 ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVL 146
ISAIR+RK I+GLTCRVGRA+SG +M+ DL+ G SIL +G PGVGKTT++REIAR+L
Sbjct: 71 ISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGSILVIGPPGVGKTTLIREIARIL 130
Query: 147 SDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIV 206
+DE +KRV+IVDTSNEIGGDGD+PHS IG +RRMQVP+ S+QH VMIEAVENHMPEVI++
Sbjct: 131 ADEGKKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKVSMQHNVMIEAVENHMPEVIVI 190
Query: 207 DEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARAR 266
DEIGTE EA A +IA+RGV L+GTAHG +E+IIKNP L L+GG+++VTLGDEEA+ R
Sbjct: 191 DEIGTELEAMAASTIAQRGVQLVGTAHGVTIESIIKNPCLQVLVGGIESVTLGDEEAKKR 250
Query: 267 RCQKSILERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 319
+ QK+ILERK PPTF +EM + V HK E +VD +L GK P E RK D
Sbjct: 251 KVQKTILERKGPPTFSCAVEMISKTECRVHHKLEATVDAILAGKPPKFEARKMD 304
>gi|30681303|ref|NP_850553.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
gi|12322790|gb|AAG51387.1|AC011560_19 unknown protein; 108050-105786 [Arabidopsis thaliana]
gi|332641383|gb|AEE74904.1| P-loop containing nucleoside triphosphate hydrolase family protein
[Arabidopsis thaliana]
Length = 547
Score = 353 bits (905), Expect = 8e-95, Method: Compositional matrix adjust.
Identities = 183/315 (58%), Positives = 230/315 (73%), Gaps = 3/315 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
AF +ILP R L +L+EV++DLGR P AR+ G + V+ ++LE
Sbjct: 97 LDAFLEILPPATRKELVKHEAIEELIEVVMDLGRKPLARFPS--GDWVISEQPVTHQDLE 154
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
A S VG+F DNR+GI+ +LHRISAIR+RK ++GLTCRVGR VSG +++ DL+ G
Sbjct: 155 LAVSKVGDFSDDNRSGIDRSLHRISAIRNRKLQVIGLTCRVGRVVSGSAEIIRDLIEGGG 214
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +G PGVGKTT++REIAR+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP
Sbjct: 215 SILVIGSPGVGKTTLIREIARMLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVP 274
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
+LQH VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKN
Sbjct: 275 NVNLQHDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKN 334
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P L LIGG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H + + +V
Sbjct: 335 PSLQILIGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTV 394
Query: 303 DMLLRGKTPLVEIRK 317
D +L GK+ EIR+
Sbjct: 395 DAILAGKSAPFEIRQ 409
>gi|296085962|emb|CBI31403.3| unnamed protein product [Vitis vinifera]
Length = 562
Score = 352 bits (904), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 180/294 (61%), Positives = 225/294 (76%), Gaps = 5/294 (1%)
Query: 33 LDLGRLPEARYLGEFGGKYLRSTE-VSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIR 91
+DLGR P AR+ G +L S + V +E+L++A S VGEF DNR+GI +LHRISAIR
Sbjct: 1 MDLGRKPLARF---PSGDWLISEQIVKLEDLQHAISKVGEFSDDNRSGINHSLHRISAIR 57
Query: 92 SRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ 151
+RK I+GLTCRVGR+VSG ++V DL+ G SIL +G PGVGKTT++REIAR+L+DE
Sbjct: 58 NRKMQIIGLTCRVGRSVSGSAEIVRDLVEGGGSILVIGPPGVGKTTLIREIARMLADEHM 117
Query: 152 KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 211
KRVVIVDTSNEIGGDGD+PHS IG ARRMQV ++QH VMIEAVENHMPE II+DEIGT
Sbjct: 118 KRVVIVDTSNEIGGDGDVPHSGIGRARRMQVSNVNMQHNVMIEAVENHMPETIIIDEIGT 177
Query: 212 EAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKS 271
E EA A +IA+RGV L+GTAHG ++NI+KNP L L+GG+++VTLGDEEAR R+ QK+
Sbjct: 178 ELEALAASTIAQRGVQLVGTAHGMTIDNIMKNPSLQILVGGIESVTLGDEEARKRKVQKT 237
Query: 272 ILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNV 324
ILERK PPTF +EM R H V H+ + +VD +L GK+PL E+R D N+
Sbjct: 238 ILERKGPPTFTCAVEMISRTHCRVHHRLDATVDAILAGKSPLFELRHMDAEANI 291
>gi|302807180|ref|XP_002985303.1| hypothetical protein SELMODRAFT_181570 [Selaginella moellendorffii]
gi|300147131|gb|EFJ13797.1| hypothetical protein SELMODRAFT_181570 [Selaginella moellendorffii]
Length = 563
Score = 352 bits (903), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/317 (56%), Positives = 227/317 (71%), Gaps = 5/317 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTE-VSVEELEYA 65
+LP L +QN + +++E++LDLGR P AR+ G + S E V++ +LE A
Sbjct: 11 LLSVLPERLERSVQNHPQLEEIVEIVLDLGRRPIARF---PSGDWSMSQEPVTIADLEDA 67
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
VG+F DNRAGI+ TLHRISAIR+R G IVGLTCRVGRAV+G +M DL+ G S+
Sbjct: 68 ICMVGDFVDDNRAGIDRTLHRISAIRNRGGRIVGLTCRVGRAVTGSAEMARDLVSSGASL 127
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT +RE+AR+L+D++ +RVVIVDTSNEI GDGDIPH IG ARRMQV
Sbjct: 128 LLMGPPGVGKTTAIREVARMLADDYDRRVVIVDTSNEIAGDGDIPHPGIGRARRMQVTNV 187
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
LQHK+MIEAVENHMPE I++DEIGTE EA A +IA+RGV L+ TAHG +EN+IKNP
Sbjct: 188 GLQHKIMIEAVENHMPETIVIDEIGTELEAAAAVTIAQRGVQLVATAHGTSVENLIKNPS 247
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW-VTHKTEKSVDM 304
L L+GG+ +VTLGD+EAR R QKS+LERK PP F IEM R W + H ++D
Sbjct: 248 LEILVGGIQSVTLGDDEARRRGVQKSVLERKGPPAFSTAIEMASRTEWRIHHSLTATIDA 307
Query: 305 LLRGKTPLVEIRKRDDR 321
LL G++P +EIR D+
Sbjct: 308 LLAGRSPSIEIRNMKDK 324
>gi|297842057|ref|XP_002888910.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297334751|gb|EFH65169.1| ATP binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 661
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 179/329 (54%), Positives = 238/329 (72%), Gaps = 4/329 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
++P ++R L+ + +L+E++LDLGR P AR+ G + VSV++LE+A
Sbjct: 79 LLALVPEEIRRTLEKHPEISELIEIVLDLGRKPLARFPS--GDSVISDEAVSVKDLEFAV 136
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S VGEF DNRAGI TLHRISAIR+RKG I+GLTCRVGR+V G +++ DL+ G S+L
Sbjct: 137 SQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQDGNSLL 196
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP
Sbjct: 197 LIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSD 256
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP L
Sbjct: 257 IQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSL 316
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
L+GGV +VTLGDEEA R QK++LERK PPTF E+ + H++ E +VD +
Sbjct: 317 DLLVGGVQSVTLGDEEATRRGGQKTVLERKGPPTFNCGAEIVSKTEVRVHRSLEATVDAV 376
Query: 306 LRGKTPLVEIRK-RDDRFNVVVDRWKTYD 333
L G+ P VEIRK + V+V++ D
Sbjct: 377 LAGRLPNVEIRKIKSHGVEVIVEKEPFID 405
>gi|326513988|dbj|BAJ92144.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326523339|dbj|BAJ88710.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 704
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 178/317 (56%), Positives = 232/317 (73%), Gaps = 3/317 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
AF +++P+ +R L + L+EV++DLGR P AR+ G + V+ ++L A
Sbjct: 90 AFLEVVPARMRRELALHPEVWDLVEVVMDLGRRPLARF--PSGDWVISDQPVTADDLRQA 147
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VG F DNR+GI +LHRISAIR+RK I+GLTCRVGRA+SG +M+ DL+ G SI
Sbjct: 148 VSKVGNFSEDNRSGINHSLHRISAIRNRKAHIIGLTCRVGRAISGSAEMIRDLVVGGGSI 207
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT++REIAR+L+DE KRV+IVDTSNEIGGDGD+PHS IG +RRMQVP+
Sbjct: 208 LVIGPPGVGKTTLIREIARILADEGNKRVIIVDTSNEIGGDGDVPHSGIGRSRRMQVPKV 267
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +++IIKNP
Sbjct: 268 TMQHNVMIEAVENHMPEVIVIDEIGTELEAMAASTIAQRGVQLVGTAHGVTIDSIIKNPC 327
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDM 304
L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + H K E +VD
Sbjct: 328 LQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFSCAVEMVSKTECRVHYKLESTVDA 387
Query: 305 LLRGKTPLVEIRKRDDR 321
+L GK P E R + +
Sbjct: 388 ILAGKPPKFEARMMNSK 404
>gi|456062084|ref|YP_007476226.1| Ycf45 (chloroplast) [Pavlova lutheri]
gi|449327271|gb|AGE93827.1| Ycf45 (chloroplast) [Pavlova lutheri]
Length = 369
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 184/335 (54%), Positives = 239/335 (71%), Gaps = 9/335 (2%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F ++LP +++ L+ D K L+EV+LDLGR+PEAR+L +L + ++++
Sbjct: 7 FENLLKVLPQFVQNSLKKDPKVDSLIEVVLDLGRMPEARFLDR--PIFLSEHLIVWKDID 64
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ V +F DNRAGIE TLHRIS+IR+R+ I+GLTCRVGRAV G I ++ DL+ +
Sbjct: 65 FLTKRVSKFSADNRAGIERTLHRISSIRNRENVIIGLTCRVGRAVLGVISIIRDLIEEEE 124
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
SIL +G+PGVGKTT +REI+R+LSDE KRV+I+DTSNEI GDGDIPH AIG+ARRMQV
Sbjct: 125 SILILGKPGVGKTTAIREISRILSDEMGKRVIIIDTSNEIAGDGDIPHPAIGSARRMQVS 184
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P LQH +MIEAVENHMP+VII+DEI TE EA A ++IAERGV LIGTAHG LE++IKN
Sbjct: 185 HPELQHHIMIEAVENHMPQVIIIDEISTELEALAAQTIAERGVKLIGTAHGNSLESLIKN 244
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P LSDLIGG+ VTLGDEEAR R QKS+LERK+ P F +E+ W H EK+V
Sbjct: 245 PTLSDLIGGIQYVTLGDEEARIRGTQKSVLERKSRPAFKIGLEIGNSKAWAVHPNIEKAV 304
Query: 303 DMLLRGKTPLVEIRKRDDRFN----VVVDRWKTYD 333
D +L +T +E + RD N V+ ++ T+D
Sbjct: 305 DQIL--QTYRLENQVRDYSVNELRQVIQCKFSTFD 337
>gi|225461612|ref|XP_002282987.1| PREDICTED: uncharacterized protein ycf45 [Vitis vinifera]
Length = 667
Score = 352 bits (902), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/312 (54%), Positives = 232/312 (74%), Gaps = 3/312 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+LP ++R R+ + QL+EV++DLGR P AR+ G L ++V+++E+A
Sbjct: 88 LLALLPEEMRRRVSEHPELHQLIEVVMDLGRKPLARFPS--GDFVLSDCPITVQDIEFAT 145
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S VG+F DNRAGI TLHRISAIR+RKGAI+GLTCRVGRA+SG +++ DL+ G S+L
Sbjct: 146 SQVGDFAIDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSANLLQDLVKDGASLL 205
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G PGVGKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP
Sbjct: 206 LIGPPGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSD 265
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L
Sbjct: 266 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 325
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
L+GG+ +VTLGDEEA R QK++LERK P TF +E+ + H + E +VD +
Sbjct: 326 EMLVGGIQSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAI 385
Query: 306 LRGKTPLVEIRK 317
L G+ P E+RK
Sbjct: 386 LSGRFPHFEVRK 397
>gi|302848609|ref|XP_002955836.1| hypothetical protein VOLCADRAFT_66371 [Volvox carteri f.
nagariensis]
gi|300258804|gb|EFJ43037.1| hypothetical protein VOLCADRAFT_66371 [Volvox carteri f.
nagariensis]
Length = 363
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 176/298 (59%), Positives = 220/298 (73%), Gaps = 3/298 (1%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE 71
P +R L+N L+EV++DLGR P AR+ G G L ++ E+LE A VG
Sbjct: 56 PPTVRAVLENHPDVETLVEVVMDLGRPPSARFPG--GDVLLSDRAMTAEDLEQAVKQVGR 113
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRP 131
F GDNR+GI+ TLHRIS IR+R G +VGLTCRVGRAV G ++V DL+ G+SIL +GRP
Sbjct: 114 FDGDNRSGIDSTLHRISCIRNRAGRVVGLTCRVGRAVPGAAELVRDLVLAGRSILLLGRP 173
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 191
GVGKTT +RE+ R+ +DE ++RVV+VDTSNEIGGDGD+PH +IG+ARRMQVP P QH V
Sbjct: 174 GVGKTTALREVCRIAADESRRRVVVVDTSNEIGGDGDVPHPSIGSARRMQVPRPEAQHDV 233
Query: 192 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
M+EAVENHMP+VI++DEI T AE A R+IA+RGV L+GTAHG LEN+IKNP L+DL+G
Sbjct: 234 MVEAVENHMPQVIVIDEISTLAECTAARTIAQRGVQLVGTAHGGRLENVIKNPSLADLVG 293
Query: 252 GVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRG 308
G+ +VTLGDEEAR R QKSILER APPTF +E+ ER W H +VD +L G
Sbjct: 294 GIQSVTLGDEEARRRGVQKSILERAAPPTFDVAVELEERGRWRVHLDVGGAVDAILAG 351
>gi|299830371|ref|YP_003734586.1| hypothetical protein KrfoC_p076 [Kryptoperidinium foliaceum]
gi|297385073|gb|ADI40371.1| conserved hypothetical protein [Kryptoperidinium foliaceum]
Length = 455
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 171/299 (57%), Positives = 222/299 (74%), Gaps = 3/299 (1%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVG 70
LPS ++D L + +L+E++LDLGR PEAR+ +G +YL +S ++L+Y +
Sbjct: 14 LPSFIQDYLHQHGYQNELIEIVLDLGRRPEARF--TYGPEYLSQKIISWQDLDYMTQRIS 71
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGR 130
+F +NRAGIE TLHRIS IR+R+ I GLTCR+GRA+ G + ++ DLL KSIL +GR
Sbjct: 72 KFSNENRAGIERTLHRISCIRNRQFLINGLTCRIGRAIFGTVSVIRDLLESEKSILILGR 131
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PGVGKTT++REIARVLSDE ++RV+I+DTSNEI GD DIPH IG ARRMQV + QH+
Sbjct: 132 PGVGKTTIIREIARVLSDEMEQRVIIIDTSNEIAGDSDIPHFGIGRARRMQVSKTEFQHQ 191
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VMIEAVENHMP+VII+DEIGT+ E A R+IAE+GV LIGT HG LEN++KNP L++LI
Sbjct: 192 VMIEAVENHMPQVIIIDEIGTDLEVLAARTIAEKGVKLIGTTHGNCLENLVKNPSLAELI 251
Query: 251 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 308
GG+ VTL DEEA+ R QKSILERK+ PTF +IE+ W+ H+ S+D+LLR
Sbjct: 252 GGIQYVTLSDEEAKRRGTQKSILERKSYPTFEHVIEINALKSWIIHENVSSSIDLLLRN 310
>gi|383788423|ref|YP_005472992.1| hypothetical protein CSE_07630 [Caldisericum exile AZM16c01]
gi|381364060|dbj|BAL80889.1| hypothetical protein CSE_07630 [Caldisericum exile AZM16c01]
Length = 496
Score = 351 bits (900), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 229/313 (73%), Gaps = 3/313 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
AF +ILP +++++L++ L+EV+LDLGR PEAR+ YLR V+ +E+
Sbjct: 12 AFLEILPKNIKEKLEDIGDFDNLIEVVLDLGRKPEARFTNR--TVYLREDPVTKDEINET 69
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
+G F D+RAGIE TLHRIS + +R+G ++GLTCRVGRAV G +D++ D++ +++
Sbjct: 70 LQKIGVFDRDHRAGIEKTLHRISGVFNRRGEVIGLTCRVGRAVYGTVDILKDIVTSDRNL 129
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +GRPGVGKTT++RE ARVLS E KRV+++DTSNEIGGDGDIPH IG ARRMQVP
Sbjct: 130 LLLGRPGVGKTTLLREAARVLSTELGKRVIVIDTSNEIGGDGDIPHPGIGNARRMQVPFG 189
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+ Q +VMIEAVENH PEVII+DEIG EA ACR+IAERGV LI TAHG +EN++ NP
Sbjct: 190 TAQEEVMIEAVENHFPEVIIIDEIGRAEEAKACRTIAERGVRLIATAHGTSIENLLVNPT 249
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERH-YWVTHKTEKSVDM 304
L DLIGG+ +VTL DEEA R QK++LERK+PPTF LIE+RER + + H ++VD
Sbjct: 250 LQDLIGGITSVTLSDEEAARRGTQKTVLERKSPPTFDTLIEIRERGVFAIYHDVAETVDA 309
Query: 305 LLRGKTPLVEIRK 317
LLRG EIRK
Sbjct: 310 LLRGFPVFPEIRK 322
>gi|302773391|ref|XP_002970113.1| hypothetical protein SELMODRAFT_410877 [Selaginella moellendorffii]
gi|300162624|gb|EFJ29237.1| hypothetical protein SELMODRAFT_410877 [Selaginella moellendorffii]
Length = 736
Score = 350 bits (899), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 177/316 (56%), Positives = 225/316 (71%), Gaps = 3/316 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+LP L +QN + +++E++LDLGR P AR+ G + V++ +LE A
Sbjct: 36 LLSVLPERLERSVQNHPQLEEIVEIVLDLGRRPIARFPS--GDWSISQEPVTIADLEDAI 93
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG+F DNRAGI+ TLHRISAIR+R G IVGLTCRVGRAV+G +M DL+ G S+L
Sbjct: 94 CMVGDFADDNRAGIDRTLHRISAIRNRGGRIVGLTCRVGRAVTGSAEMARDLVSSGASLL 153
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G PGVGKTT +RE+AR+L+D++ +RVVIVDTSNEI GDGDIPH IG ARRMQV
Sbjct: 154 LMGPPGVGKTTAIREVARMLADDYDRRVVIVDTSNEIAGDGDIPHPGIGRARRMQVTNVG 213
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
LQHK+MIEAVENHMPE I++DEIGTE EA A +IA+RGV L+ TAHG +EN+IKNP L
Sbjct: 214 LQHKIMIEAVENHMPETIVIDEIGTELEAAAAVTIAQRGVQLVATAHGTSVENLIKNPSL 273
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYW-VTHKTEKSVDML 305
L+GG+ +VTLGD+EAR R QKS+LERK PP F IEM R W + H ++D L
Sbjct: 274 EILVGGIQSVTLGDDEARRRGVQKSVLERKGPPAFSTAIEMASRTEWRIHHSLTATIDAL 333
Query: 306 LRGKTPLVEIRKRDDR 321
L G++P +EIR D+
Sbjct: 334 LAGRSPSIEIRNMKDK 349
>gi|332295596|ref|YP_004437519.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermodesulfobium narugense DSM 14796]
gi|332178699|gb|AEE14388.1| single-stranded nucleic acid binding R3H domain-containing protein
[Thermodesulfobium narugense DSM 14796]
Length = 520
Score = 350 bits (898), Expect = 5e-94, Method: Compositional matrix adjust.
Identities = 179/332 (53%), Positives = 230/332 (69%), Gaps = 3/332 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
ILP D + + ++E++LDLGR PE R+ + + + +V+ E+L+
Sbjct: 12 CLIDILPDDFKYPILELKNLNDIVEIVLDLGRYPEVRFPED--AFEITTKQVTREDLQNV 69
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
VG F GDNRAGIE TLHRIS IR+R G IVGLT RVGRAV G ID++ D++ ++I
Sbjct: 70 VKKVGVFSGDNRAGIERTLHRISCIRNRSGEIVGLTLRVGRAVFGTIDIIKDIVESKENI 129
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PG+GKTT +REIARVLS + ++RV+++DTSNEIGGDGDIPH AIG +RRMQVP P
Sbjct: 130 LLMGPPGIGKTTKLREIARVLSVDMKRRVIVIDTSNEIGGDGDIPHPAIGKSRRMQVPTP 189
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
QH VMIEAVENHMP+VIIVDEIGTE EA A R+IAERGV LI TAHG L N+I NP
Sbjct: 190 EKQHAVMIEAVENHMPQVIIVDEIGTELEAQAARTIAERGVQLIATAHGNSLVNLIMNPT 249
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDM 304
LSDL+GGV VTL DEEA+ RR QK+I ERK PTF +IE+ +R V HK +K VD
Sbjct: 250 LSDLVGGVQVVTLSDEEAKRRRTQKTIQERKTQPTFNVVIELLDREKMVIHKNVDKVVDQ 309
Query: 305 LLRGKTPLVEIRKRDDRFNVVVDRWKTYDRHD 336
LL+G+ E+R + ++++ + + D
Sbjct: 310 LLKGEQIRPEVRSKSSDGKIIIEEHRMELKED 341
>gi|299830572|ref|YP_003735020.1| hypothetical protein PyulOm_p071 [Durinskia baltica]
gi|297384936|gb|ADI40235.1| hypothetical protein [Durinskia baltica]
Length = 455
Score = 350 bits (897), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 176/317 (55%), Positives = 224/317 (70%), Gaps = 3/317 (0%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEE 61
N Q LP ++ L + +L+E++LDLGR PEAR+ G +YL +S ++
Sbjct: 5 NDLEKLLQNLPFFIQQYLHQHPYKNELIEIVLDLGRRPEARF--SHGPEYLSQKIISWQD 62
Query: 62 LEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY 121
L+Y + +F +NRAGIE TLHRIS IR+R+ I GLTCRVGRAV G I ++ DLL
Sbjct: 63 LDYITQRISKFSSENRAGIERTLHRISCIRNRQFLINGLTCRVGRAVFGTISVIRDLLES 122
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
KSIL +GRPGVGKTT++REI RVL+DE +KRV+I+DTSNEI GD DIPH IG ARRMQ
Sbjct: 123 DKSILILGRPGVGKTTIIREIGRVLADEMEKRVIIIDTSNEIAGDSDIPHFGIGRARRMQ 182
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + QH+VMIEAVENHMP+VII+DEIGT+ E A R+IAE+GV L+GT HG LEN+I
Sbjct: 183 VSQTEFQHQVMIEAVENHMPQVIIIDEIGTDLEVLAARTIAEKGVKLVGTTHGNCLENLI 242
Query: 242 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEK 300
KNP L++LIGG+ VTL DEEA+ R QKSILERKA PTF +IE+ + W H+
Sbjct: 243 KNPSLAELIGGIKYVTLSDEEAKRRGTQKSILERKAYPTFELVIEINNSNSWTIHEDVAH 302
Query: 301 SVDMLLRGKTPLVEIRK 317
SVD+ LR + +IR+
Sbjct: 303 SVDLFLRNNSGKEQIRQ 319
>gi|145341893|ref|XP_001416037.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144576260|gb|ABO94329.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 552
Score = 349 bits (896), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 177/313 (56%), Positives = 225/313 (71%), Gaps = 10/313 (3%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE 71
P +R L D++R +L EV+LDLGRLP+AR+ G + V+ E+L + VG+
Sbjct: 6 PERVRRALAEDARRLELTEVVLDLGRLPKARF--PDGDATIGDELVTYEDLNRMMTKVGD 63
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH-------YGKS 124
G DNRAGI GTLHRISAI++R G ++G TCRVGRA+SG +++ D+L + S
Sbjct: 64 VGRDNRAGINGTLHRISAIKNRYGKVIGATCRVGRAISGSAELIRDVLDAETSVTTFNNS 123
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
IL +GRPGVGKTT +REI+R+LSDE +RVVIVDTSNEIGGDGD+PH IG ARRMQVP
Sbjct: 124 ILLLGRPGVGKTTAIREISRILSDEHSRRVVIVDTSNEIGGDGDVPHRGIGGARRMQVPN 183
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
S QH V+IEAVENH P+ ++VDEIGT+ EA A ++I+ERGV +IGTAHG LEN++KNP
Sbjct: 184 ASEQHLVLIEAVENHTPQTVVVDEIGTQQEADAAQTISERGVQMIGTAHGHTLENVLKNP 243
Query: 245 ILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVD 303
L DLIGGV +VTLGD+EAR R QKS+LER PPTF +EM + W H SVD
Sbjct: 244 ALCDLIGGVVSVTLGDDEARRRGVQKSVLERAGPPTFTIAVEMLDIGTWRVHTDVAASVD 303
Query: 304 MLLRGKTPLVEIR 316
LL G++P+ E+R
Sbjct: 304 ALLAGQSPMTELR 316
>gi|224056549|ref|XP_002298905.1| predicted protein [Populus trichocarpa]
gi|222846163|gb|EEE83710.1| predicted protein [Populus trichocarpa]
Length = 654
Score = 349 bits (895), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 170/315 (53%), Positives = 234/315 (74%), Gaps = 3/315 (0%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
G +LP ++R R+ + L+EV++DLGR P AR+ G L +++++L+
Sbjct: 72 LGRLLALLPQEMRKRVSEHPELLDLVEVVMDLGRKPLARFPS--GDFVLSDCPITLQDLQ 129
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+A S VG+F DNRAGI TLHRISAIR+R+G I+GLTCRVGRA+ G ++ DL+H G
Sbjct: 130 HATSQVGDFAIDNRAGISQTLHRISAIRNREGQIIGLTCRVGRAIPGSASLLRDLVHDGA 189
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+LF+G PGVGKTT++REIAR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP
Sbjct: 190 SLLFIGPPGVGKTTIIREIARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVP 249
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
+ +QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I N
Sbjct: 250 DLDMQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGITIENLILN 309
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSV 302
P L L+GG+ +VTLGDEEA R QK++LERK P TF +E+ + H++ E +V
Sbjct: 310 PSLEMLVGGIQSVTLGDEEANRRGVQKTVLERKGPSTFSCGVEIISKTELRVHRSLEATV 369
Query: 303 DMLLRGKTPLVEIRK 317
D +L G++P VE+ K
Sbjct: 370 DAILSGRSPHVEVCK 384
>gi|255557073|ref|XP_002519569.1| Stage III sporulation protein AA, putative [Ricinus communis]
gi|223541266|gb|EEF42818.1| Stage III sporulation protein AA, putative [Ricinus communis]
Length = 726
Score = 348 bits (893), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 171/313 (54%), Positives = 232/313 (74%), Gaps = 3/313 (0%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
+LP ++R R+ S+ L+EV++DLGR P AR+ G L V+++++E+A S V
Sbjct: 151 LLPEEMRRRVSEHSELHDLVEVVMDLGRRPLARFPS--GDFVLSDCPVTLQDIEHATSQV 208
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G+F DNRAGI TLHRISAIR+RKG I+GLTCRVGRA+ G ++ DL+ G S+L +G
Sbjct: 209 GDFAIDNRAGISRTLHRISAIRNRKGHIIGLTCRVGRAIPGSTSLLRDLIQDGSSLLLIG 268
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
PGVGKTT++REIAR+L+ +++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP QH
Sbjct: 269 PPGVGKTTIIREIARMLATDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDKQH 328
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
KV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ T+HG +EN+I NP L L
Sbjct: 329 KVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATSHGVTIENLIVNPSLEML 388
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 308
+GG+ +VTLGDEEA R QK++LERK P TF +E+ ++ H++ E +VD +L G
Sbjct: 389 VGGIQSVTLGDEEANRRGVQKTVLERKGPSTFSCAVEIIAKNELRVHRSLEATVDAILSG 448
Query: 309 KTPLVEIRKRDDR 321
+ P VE+RK D +
Sbjct: 449 RPPNVEVRKMDSQ 461
>gi|326488989|dbj|BAJ98106.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 650
Score = 348 bits (892), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 172/308 (55%), Positives = 229/308 (74%), Gaps = 5/308 (1%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYAQSAVG 70
P +LR +++ + L+EV++DLGR P AR+ G+F L +S ++L A + VG
Sbjct: 81 PGELRRSVEDHPELPALVEVVMDLGRPPLARFPSGDF---LLSHRPISFDDLHQATAKVG 137
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGR 130
+FGGDNRAGI TLHRISAIR+R+G IVGLTCRVGRAV+G +++ DL+ G S+L +G
Sbjct: 138 DFGGDNRAGISRTLHRISAIRNRQGDIVGLTCRVGRAVAGSANLLQDLVKAGGSLLLIGP 197
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PGVGKTTV+REIAR+L+D++ KRV+IVDTSNEI GDGDIPH IG ARR+QVP +QHK
Sbjct: 198 PGVGKTTVIREIARMLADDYDKRVMIVDTSNEIAGDGDIPHPGIGNARRLQVPNQEMQHK 257
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
V+IEAVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ +AHG +EN+ NP L L+
Sbjct: 258 VLIEAVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVASAHGVTIENLTMNPSLDMLV 317
Query: 251 GGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGK 309
GG+ +VTLGDEEA RR QK++LERK P TF + +E+ + H++ E +VD LL G+
Sbjct: 318 GGIQSVTLGDEEASRRRVQKTVLERKGPSTFAYAVEIVSKTELRVHRSLEATVDALLAGR 377
Query: 310 TPLVEIRK 317
P VEIRK
Sbjct: 378 MPNVEIRK 385
>gi|302142922|emb|CBI20217.3| unnamed protein product [Vitis vinifera]
Length = 572
Score = 347 bits (889), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 170/305 (55%), Positives = 230/305 (75%), Gaps = 5/305 (1%)
Query: 15 LRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYAQSAVGEFG 73
+R R+ + QL+EV++DLGR P AR+ G+F L ++V+++E+A S VG+F
Sbjct: 1 MRRRVSEHPELHQLIEVVMDLGRKPLARFPSGDF---VLSDCPITVQDIEFATSQVGDFA 57
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGV 133
DNRAGI TLHRISAIR+RKGAI+GLTCRVGRA+SG +++ DL+ G S+L +G PGV
Sbjct: 58 IDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSANLLQDLVKDGASLLLIGPPGV 117
Query: 134 GKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMI 193
GKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP +QHKV+I
Sbjct: 118 GKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSDMQHKVLI 177
Query: 194 EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGV 253
EAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+GG+
Sbjct: 178 EAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGI 237
Query: 254 DTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPL 312
+VTLGDEEA R QK++LERK P TF +E+ + H + E +VD +L G+ P
Sbjct: 238 QSVTLGDEEASRRGVQKTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAILSGRFPH 297
Query: 313 VEIRK 317
E+RK
Sbjct: 298 FEVRK 302
>gi|22330595|ref|NP_177460.2| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
gi|332197301|gb|AEE35422.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
Length = 666
Score = 346 bits (888), Expect = 7e-93, Method: Compositional matrix adjust.
Identities = 175/313 (55%), Positives = 231/313 (73%), Gaps = 5/313 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYA 65
++P ++R L+ + +L+E++LDLGR P AR+ G+F + V V++LE+A
Sbjct: 84 LLALVPEEIRQTLKEHPEISELIEIVLDLGRKPLARFPSGDF---VISDDAVRVKDLEFA 140
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VGEF DNRAGI TLHRISAIR+RKG I+GLTCRVGR+V G +++ DL+ G S+
Sbjct: 141 VSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQDGNSL 200
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP
Sbjct: 201 LLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNS 260
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP
Sbjct: 261 DIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPS 320
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDM 304
L L+GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD
Sbjct: 321 LDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDA 380
Query: 305 LLRGKTPLVEIRK 317
+L G+ P VEIRK
Sbjct: 381 ILAGRLPNVEIRK 393
>gi|357125252|ref|XP_003564309.1| PREDICTED: uncharacterized protein ycf45-like [Brachypodium
distachyon]
Length = 650
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 173/308 (56%), Positives = 226/308 (73%), Gaps = 3/308 (0%)
Query: 18 RLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNR 77
R++ + L+EV++DLGR P AR+ G L +S +EL +A + VG+FGGDNR
Sbjct: 89 RVEGHPELPALVEVVMDLGRPPLARFPS--GDFLLSHRPISFDELHHATAKVGDFGGDNR 146
Query: 78 AGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTT 137
AGI TLHRISAIR+RKG IVGLTCRVGRAV G ++ DL+ G S+L +G PGVGKTT
Sbjct: 147 AGISRTLHRISAIRNRKGDIVGLTCRVGRAVPGSAILLQDLVKDGGSLLLIGPPGVGKTT 206
Query: 138 VMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVE 197
V+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHKV+IEAVE
Sbjct: 207 VIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQEMQHKVLIEAVE 266
Query: 198 NHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVT 257
NHMP+ I++DEIGT+ EA A +IA+RG+ L+ +AHG +EN+ NP L L+GG+ +VT
Sbjct: 267 NHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVASAHGVTIENLTMNPSLEMLVGGIQSVT 326
Query: 258 LGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIR 316
LGDEEA RR QK++LERK P TF + +E+ + H++ E +VD LL G+ P VEIR
Sbjct: 327 LGDEEANRRRVQKTVLERKGPSTFTYAVEIVSKTELRVHRSLEATVDALLAGRLPNVEIR 386
Query: 317 KRDDRFNV 324
K +V
Sbjct: 387 KLGSNMSV 394
>gi|12324328|gb|AAG52137.1|AC010556_19 putative ATPase; 52924-55985 [Arabidopsis thaliana]
Length = 652
Score = 346 bits (887), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 175/313 (55%), Positives = 231/313 (73%), Gaps = 5/313 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYA 65
++P ++R L+ + +L+E++LDLGR P AR+ G+F + V V++LE+A
Sbjct: 84 LLALVPEEIRQTLKEHPEISELIEIVLDLGRKPLARFPSGDF---VISDDAVRVKDLEFA 140
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VGEF DNRAGI TLHRISAIR+RKG I+GLTCRVGR+V G +++ DL+ G S+
Sbjct: 141 VSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQDGNSL 200
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP
Sbjct: 201 LLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNS 260
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP
Sbjct: 261 DIQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPS 320
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDM 304
L L+GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD
Sbjct: 321 LDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDA 380
Query: 305 LLRGKTPLVEIRK 317
+L G+ P VEIRK
Sbjct: 381 ILAGRLPNVEIRK 393
>gi|159484693|ref|XP_001700387.1| predicted protein [Chlamydomonas reinhardtii]
gi|158272274|gb|EDO98076.1| predicted protein [Chlamydomonas reinhardtii]
Length = 324
Score = 345 bits (886), Expect = 1e-92, Method: Compositional matrix adjust.
Identities = 176/314 (56%), Positives = 222/314 (70%), Gaps = 3/314 (0%)
Query: 12 PSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE 71
PS +R L+ QL+EV++DLGR P AR+ G L ++ ++L+ A VG
Sbjct: 13 PSRVRAVLEARPDIEQLVEVVMDLGRPPSARF--PHGDVDLCPEPMTAQDLDTAVRQVGH 70
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRP 131
F GDNRAGI+ TLHRISAIR+R G +VGLTCRVGRAV G +V DL+ G+S+L +GRP
Sbjct: 71 FDGDNRAGIDSTLHRISAIRNRGGRVVGLTCRVGRAVPGAAALVRDLVLAGRSVLLLGRP 130
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKV 191
GVGKTT +RE+ R+ +DE +RVV+VDTSNEIGGDGD+PH +IG ARRMQV P QH V
Sbjct: 131 GVGKTTALREVCRIAADEAARRVVVVDTSNEIGGDGDVPHPSIGGARRMQVSRPEAQHAV 190
Query: 192 MIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
M+EAVENHMP+V+++DEI T AE A R+IA+RGV L+ TAHG L+N+IKNP L+DL+G
Sbjct: 191 MVEAVENHMPQVVVIDEISTLAECGAARTIAQRGVQLVATAHGRQLDNVIKNPTLADLVG 250
Query: 252 GVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKT 310
G+ +VTLGDEEA+ R QKSILER APPTF +EM ER W H +VD LL G
Sbjct: 251 GIQSVTLGDEEAKRRGVQKSILERAAPPTFDVAVEMEERGRWRVHLDVAAAVDSLLAGGE 310
Query: 311 PLVEIRKRDDRFNV 324
++R DD V
Sbjct: 311 AAGQVRLLDDSGEV 324
>gi|18086459|gb|AAL57683.1| At1g73170/T18K17_17 [Arabidopsis thaliana]
Length = 666
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 175/313 (55%), Positives = 230/313 (73%), Gaps = 5/313 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYA 65
++P ++R L+ + +L+E++LDLGR P AR+ G+F + V V++LE+A
Sbjct: 84 LLALVPEEIRQTLKEHPEISELIEIVLDLGRKPLARFPSGDF---VISDDAVRVKDLEFA 140
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
S VGEF DNRAGI TLHRISAIR+RKG I+GLTCRVGR+V G +++ DL+ G S+
Sbjct: 141 VSQVGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQDGNSL 200
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP
Sbjct: 201 LLIGPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNS 260
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
QHKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP
Sbjct: 261 DTQHKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPS 320
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDM 304
L L+GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD
Sbjct: 321 LDLLVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDA 380
Query: 305 LLRGKTPLVEIRK 317
+L G+ P VEIRK
Sbjct: 381 ILAGRLPNVEIRK 393
>gi|147816324|emb|CAN66201.1| hypothetical protein VITISV_007543 [Vitis vinifera]
Length = 693
Score = 345 bits (884), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 168/312 (53%), Positives = 230/312 (73%), Gaps = 3/312 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+LP ++R R+ + QL+EV++DLGR P AR+ G L ++V+++++A
Sbjct: 114 LLALLPEEMRRRVSEHPELHQLIEVVMDLGRKPLARFPS--GDFVLSDCPITVQDIKFAT 171
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S VG+F DNRAGI TLHRISAIR+RKGAI+GLTCRVGRA+SG +++ DL+ G S+L
Sbjct: 172 SQVGDFAIDNRAGISRTLHRISAIRNRKGAIIGLTCRVGRAISGSANLLQDLVKDGASLL 231
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G PGVGKTT++RE+AR+L+++++KRV+IVDTSNEIGGDGDIPH+ IG ARRMQVP
Sbjct: 232 LIGPPGVGKTTIIREVARMLANDYKKRVMIVDTSNEIGGDGDIPHAGIGNARRMQVPNSD 291
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+QHKV+IEAVENHMP+VI++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L
Sbjct: 292 MQHKVLIEAVENHMPQVIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSL 351
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
L+GG+ +VTLG EEA R Q ++LERK P TF +E+ + H + E +VD +
Sbjct: 352 EMLVGGIQSVTLGXEEASRRGVQXTVLERKGPSTFSCGVEIISKTELQVHPSLEATVDAI 411
Query: 306 LRGKTPLVEIRK 317
L G+ P E+RK
Sbjct: 412 LSGRFPHFEVRK 423
>gi|242092028|ref|XP_002436504.1| hypothetical protein SORBIDRAFT_10g003860 [Sorghum bicolor]
gi|241914727|gb|EER87871.1| hypothetical protein SORBIDRAFT_10g003860 [Sorghum bicolor]
Length = 657
Score = 343 bits (880), Expect = 6e-92, Method: Compositional matrix adjust.
Identities = 173/292 (59%), Positives = 220/292 (75%), Gaps = 5/292 (1%)
Query: 28 LLEVILDLGRLPEARYL-GEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHR 86
L+EV++DLGR P AR+ G+F L +S ++L +A S VG+FG DNRAGI TLHR
Sbjct: 102 LVEVVMDLGRPPLARFPSGDF---LLSHRPISFDDLRHATSQVGDFGADNRAGISRTLHR 158
Query: 87 ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVL 146
ISAIR+RKG IVGLTCRVGRAV G +++ DL+ G S+L +G PGVGKTTV+REIAR+L
Sbjct: 159 ISAIRNRKGVIVGLTCRVGRAVPGSANLLQDLVKDGGSLLLIGPPGVGKTTVIREIARML 218
Query: 147 SDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIV 206
+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHKV+IEAVENHMP+ I++
Sbjct: 219 ADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHKVLIEAVENHMPQAIVI 278
Query: 207 DEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARAR 266
DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+GG+ +VTLGDEEA R
Sbjct: 279 DEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVTLGDEEANRR 338
Query: 267 RCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRK 317
QK++LERK P TF E+ + H++ E +VD LL GK P VEIRK
Sbjct: 339 GVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGKLPNVEIRK 390
>gi|308081617|ref|NP_001183219.1| uncharacterized protein LOC100501605 [Zea mays]
gi|238010124|gb|ACR36097.1| unknown [Zea mays]
Length = 587
Score = 343 bits (879), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 171/290 (58%), Positives = 220/290 (75%), Gaps = 3/290 (1%)
Query: 33 LDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRS 92
+DLGR P AR+ G + V+ ++L A + VG+F DNR+GI +LHRISAIR+
Sbjct: 1 MDLGRRPIARFPS--GDWAISDQPVTADDLRQAVAKVGDFSEDNRSGINHSLHRISAIRN 58
Query: 93 RKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
RK I+GLTCRVGRA+SG +M+ DL+ G SIL +G PGVGKTT++REIAR+L+DE +K
Sbjct: 59 RKAQIIGLTCRVGRAISGSAEMIRDLVVSGGSILVIGPPGVGKTTLIREIARILADEGKK 118
Query: 153 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 212
RV+IVDTSNEIGGDGD+PHS IG ARRMQVP+ ++QH VMIEAVENHMPEVI++DEIGTE
Sbjct: 119 RVIIVDTSNEIGGDGDVPHSGIGRARRMQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTE 178
Query: 213 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 272
EA A +IA+RGV L+GTAHG +E+IIKNP L L+GG+++VTLGDEEA+ R+ QK+I
Sbjct: 179 LEAMAATTIAQRGVQLVGTAHGVTIESIIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTI 238
Query: 273 LERKAPPTFYFLIEM-RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRDDR 321
LERK PPTF +EM + V H+ + +VD +L GK P E RK ++
Sbjct: 239 LERKGPPTFLCAVEMISKTECRVHHRLDATVDAILAGKPPKFEARKMHNK 288
>gi|194477061|ref|YP_002049240.1| hypothetical protein PCC_0600 [Paulinella chromatophora]
gi|171192068|gb|ACB43030.1| hypothetical protein PCC_0600 [Paulinella chromatophora]
Length = 477
Score = 343 bits (879), Expect = 8e-92, Method: Compositional matrix adjust.
Identities = 168/309 (54%), Positives = 218/309 (70%), Gaps = 3/309 (0%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVE 60
++ ILP+ + L N K +LLE+ILDLG++P A Y L ++
Sbjct: 17 ISELNHLLNILPARVYQALSNQQKMEELLEIILDLGKIPIAHY--RNNSLLLGDKPITRI 74
Query: 61 ELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH 120
+LE +G FG DNR GI+ TLHRISA+R+RKG I+GLTCRVGRA+ G I M+ DLL
Sbjct: 75 DLERITERLGSFGEDNRVGIDSTLHRISALRNRKGTIIGLTCRVGRAICGDIIMIRDLLD 134
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 180
G+SIL +G PG+GKTT +REIAR+L+D+ +RV+I+DTSNEI GD DIPH +IG ARRM
Sbjct: 135 SGQSILIMGCPGIGKTTALREIARLLADDLNRRVIIIDTSNEIAGDSDIPHPSIGKARRM 194
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
QV P+LQH++MIEA+ENH PEVI++DEIGTE EA A R+IAERG+ LI TAHG+ L ++
Sbjct: 195 QVANPNLQHRMMIEAIENHTPEVIVIDEIGTEMEAQAARTIAERGIQLIATAHGDGLASL 254
Query: 241 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TE 299
+KNP LSDL+GG+ +V LGD+EA+ R QK++LER A PTF IEM H W H
Sbjct: 255 VKNPTLSDLVGGIQSVILGDDEAQRRCTQKTVLERAADPTFPVAIEMHTSHRWSIHADVA 314
Query: 300 KSVDMLLRG 308
VD++LR
Sbjct: 315 HMVDIILRN 323
>gi|412992135|emb|CCO19848.1| predicted protein [Bathycoccus prasinos]
Length = 773
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 177/350 (50%), Positives = 242/350 (69%), Gaps = 17/350 (4%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-------------LGEFG 48
N ++LPS +R++L ++ +L+EV++D+GR+P AR+ L +F
Sbjct: 164 NELNMLLRVLPSRIREQLHKHERKLELIEVVMDVGRVPLARFPEGPAEPLYSKESLKKFD 223
Query: 49 GKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAV 108
S+++++++++ A +GE GGDNRAGI+GTLHRIS IR+R+G ++GLTCRVGRAV
Sbjct: 224 VWDAESSKITMDDIDEAVRLLGEVGGDNRAGIDGTLHRISMIRNRRGTVIGLTCRVGRAV 283
Query: 109 SGHIDMVYDLLHYGKSILFV--GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD 166
G ++ DL+ +S + G PGVGKTT +RE++R+LS +F +RVVIVDTSNEIGGD
Sbjct: 284 KGAAELCKDLVSSEESSSVLLLGPPGVGKTTAIREMSRLLSADFNQRVVIVDTSNEIGGD 343
Query: 167 GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
GD+ H +G +RRMQV +P LQH V+IEAVENH P+V+IVDEIGTE EA A R+I+ERGV
Sbjct: 344 GDVAHPGVGNSRRMQVADPKLQHAVLIEAVENHTPQVVIVDEIGTEEEAMAARTISERGV 403
Query: 227 MLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIE 286
+I TAHG LEN++KNP L DL+GGV +VTLGD+EAR RR QK+ILER+ PPTF +E
Sbjct: 404 KMIATAHGHTLENVLKNPSLCDLVGGVQSVTLGDDEARRRRGQKTILEREGPPTFSIAVE 463
Query: 287 MRERHYWVTHK-TEKSVDMLLRGKTPLVEIRK-RDDRFNVVVDRWKTYDR 334
M + W H SVD LL G+ P E+R R+D V V ++ R
Sbjct: 464 MLDIGLWRVHTDVASSVDALLAGQAPFTELRALREDGIVVQVPEFRENSR 513
>gi|452821468|gb|EME28498.1| [pt] hypothetical protein [Galdieria sulphuraria]
Length = 493
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 172/310 (55%), Positives = 227/310 (73%), Gaps = 12/310 (3%)
Query: 33 LDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRS 92
+DLG+ PEAR+ Y+ + ++ +++ Y +G+F DNR GI+ TLHRIS+I +
Sbjct: 1 MDLGKKPEARFSDHV--YYISNKNINWQDINYCIRRLGKFNVDNRTGIKNTLHRISSINN 58
Query: 93 RKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
R+G +VGLT RVGRAV G+I+++ DLL G SIL +G+PGVGKTT +REIAR+L+DE K
Sbjct: 59 REGQVVGLTYRVGRAVLGNINIIRDLLEIGHSILILGKPGVGKTTAIREIARILADEIGK 118
Query: 153 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 212
RV+I+DTSNEI GD DI H +IG ARRMQV P LQH+VMIEA+ENHMPEVII+DEI TE
Sbjct: 119 RVIIIDTSNEIAGDSDIGHFSIGRARRMQVKHPQLQHQVMIEAIENHMPEVIIIDEISTE 178
Query: 213 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 272
EA A R+IAERGV LIGTAHG LEN+I+N LSDLIGG+ VTLGDEEAR R QKSI
Sbjct: 179 LEAIAARTIAERGVQLIGTAHGNSLENLIRNFTLSDLIGGIQYVTLGDEEARKRGTQKSI 238
Query: 273 LERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRGKTPLVEIRKRDDRF----NVVVD 327
LERK+ PTF +IE+ + + W H+ E++VD +L+G P+++ DRF N +
Sbjct: 239 LERKSFPTFNIVIEIHQLYSWRIHQDVEQNVDRILQGSRPILQ-----DRFISLDNKHII 293
Query: 328 RWKTYDRHDI 337
++ Y+ ++I
Sbjct: 294 KYSQYNNNEI 303
>gi|15810179|gb|AAL06991.1| AT3g10420/F13M14_30 [Arabidopsis thaliana]
gi|28416489|gb|AAO42775.1| At3g10420/F13M14_30 [Arabidopsis thaliana]
Length = 559
Score = 338 bits (866), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 173/286 (60%), Positives = 216/286 (75%), Gaps = 3/286 (1%)
Query: 33 LDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRS 92
+DLGR P AR+ G + V+ ++LE A S VG+F DNR+GI+ +LHRISAIR+
Sbjct: 1 MDLGRKPLARFPS--GDWVISEQPVTHQDLELAVSKVGDFSDDNRSGIDRSLHRISAIRN 58
Query: 93 RKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
RK ++GLTCRVGR VSG +++ DL+ G SIL +G PGVGKTT++REIAR+L+DE +K
Sbjct: 59 RKLQVIGLTCRVGRVVSGSAEIIRDLIEGGGSILVIGSPGVGKTTLIREIARMLADEHRK 118
Query: 153 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 212
RVVIVDTSNEIGGDGD+PHS IG ARRMQVP +LQH VMIEAVENHMPE II+DEIGTE
Sbjct: 119 RVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHDVMIEAVENHMPETIIIDEIGTE 178
Query: 213 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 272
EA A +IA+RGV L+ TAHG ++NIIKNP L LIGG+++VTLGDEEAR R+ QK+I
Sbjct: 179 LEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILIGGIESVTLGDEEARKRKVQKTI 238
Query: 273 LERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRK 317
LERK PPTF +EM R H + + +VD +L GK+ EIR+
Sbjct: 239 LERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGKSAPFEIRQ 284
>gi|226498156|ref|NP_001142150.1| uncharacterized protein LOC100274315 [Zea mays]
gi|223947319|gb|ACN27743.1| unknown [Zea mays]
gi|413942919|gb|AFW75568.1| hypothetical protein ZEAMMB73_728588 [Zea mays]
Length = 661
Score = 337 bits (864), Expect = 4e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 223/304 (73%), Gaps = 7/304 (2%)
Query: 18 RLQNDSKRGQLLEVILDLGRLPEARYL-GEFGGKYLRSTEVSVEELEYA--QSAVGEFGG 74
R++ + L+EV++DLGR P AR+ G+F L +S ++L +A S VG+FG
Sbjct: 93 RVETHPELPALVEVVMDLGRPPLARFPSGDF---LLSQRPISFDDLRHATSHSQVGDFGA 149
Query: 75 DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVG 134
DNRAGI TLHRISAIR+RKG IVGLTCRVGRAV G +++ DL+ G S+L +G PGVG
Sbjct: 150 DNRAGISRTLHRISAIRNRKGVIVGLTCRVGRAVPGSANLLQDLVKDGGSLLLIGPPGVG 209
Query: 135 KTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIE 194
KTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHKV+IE
Sbjct: 210 KTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHKVLIE 269
Query: 195 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVD 254
AVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+GG+
Sbjct: 270 AVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQ 329
Query: 255 TVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLV 313
+VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK P
Sbjct: 330 SVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGKLPNF 389
Query: 314 EIRK 317
EIRK
Sbjct: 390 EIRK 393
>gi|413942920|gb|AFW75569.1| hypothetical protein ZEAMMB73_728588 [Zea mays]
Length = 572
Score = 336 bits (862), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 173/304 (56%), Positives = 223/304 (73%), Gaps = 7/304 (2%)
Query: 18 RLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYA--QSAVGEFGG 74
R++ + L+EV++DLGR P AR+ G+F L +S ++L +A S VG+FG
Sbjct: 93 RVETHPELPALVEVVMDLGRPPLARFPSGDF---LLSQRPISFDDLRHATSHSQVGDFGA 149
Query: 75 DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVG 134
DNRAGI TLHRISAIR+RKG IVGLTCRVGRAV G +++ DL+ G S+L +G PGVG
Sbjct: 150 DNRAGISRTLHRISAIRNRKGVIVGLTCRVGRAVPGSANLLQDLVKDGGSLLLIGPPGVG 209
Query: 135 KTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIE 194
KTTV+REIAR+L+D+++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHKV+IE
Sbjct: 210 KTTVIREIARMLADDYKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHKVLIE 269
Query: 195 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVD 254
AVENHMP+ I++DEIGT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+GG+
Sbjct: 270 AVENHMPQAIVIDEIGTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQ 329
Query: 255 TVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLV 313
+VTLGDEEA R QK++LERK P TF E+ + H++ E +VD LL GK P
Sbjct: 330 SVTLGDEEANRRGVQKTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGKLPNF 389
Query: 314 EIRK 317
EIRK
Sbjct: 390 EIRK 393
>gi|444914392|ref|ZP_21234535.1| hypothetical protein D187_06705 [Cystobacter fuscus DSM 2262]
gi|444714624|gb|ELW55503.1| hypothetical protein D187_06705 [Cystobacter fuscus DSM 2262]
Length = 582
Score = 335 bits (858), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 188/315 (59%), Positives = 229/315 (72%), Gaps = 4/315 (1%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F +LP L+D ++ + G++LEV++DLGR PEAR +G G L V+ +ELE
Sbjct: 16 FLLLVGVLPEVLQDAVR-EMPPGEVLEVVMDLGRPPEARLVG--GVARLSEAPVTRKELE 72
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ VG G DNRAGIE TLHR+SAIR+R+G +VGLT RVGRA+ G IDM+ DL+ G+
Sbjct: 73 QVIAQVGSVGEDNRAGIERTLHRVSAIRNRRGKVVGLTLRVGRAIFGTIDMLKDLIASGQ 132
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
+IL +GRPGVGKTT +RE+ARVL+D+ KRV++VDTSNEIGGDGDIPH IG ARRMQV
Sbjct: 133 NILLLGRPGVGKTTKLREVARVLADDLGKRVMVVDTSNEIGGDGDIPHPGIGGARRMQVS 192
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QH VMIEAVENHMPE IIVDEIGT AEA A R+IAERGV L+ TAHG LEN++ N
Sbjct: 193 RPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQLVATAHGNTLENLVLN 252
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSV 302
P LSDL+GGV TVTL DEEAR R QK+I ERK PPTF ++EM R H T ++V
Sbjct: 253 PTLSDLVGGVHTVTLSDEEARRRHTQKTITERKGPPTFDVVVEMVSRDEVRVHGDTAEAV 312
Query: 303 DMLLRGKTPLVEIRK 317
D LL G+ P E R+
Sbjct: 313 DRLLAGEVPGGEQRQ 327
>gi|442324641|ref|YP_007364662.1| hypothetical protein MYSTI_07706 [Myxococcus stipitatus DSM 14675]
gi|441492283|gb|AGC48978.1| hypothetical protein MYSTI_07706 [Myxococcus stipitatus DSM 14675]
Length = 604
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 184/307 (59%), Positives = 227/307 (73%), Gaps = 4/307 (1%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F + ++LP +LR ++ + Q+LEV+LDLGR+PEAR + LR + V E+L
Sbjct: 14 FRLWVEVLPEELRAVVRALAPE-QVLEVVLDLGRVPEARLVDRV--VTLRESPVGPEDLA 70
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ VG G DNRAGIE TLHR+SAIR+R+G +VGLT RVGRAV G IDM+ DL+ G+
Sbjct: 71 QVMAQVGPPGEDNRAGIERTLHRVSAIRNRRGQVVGLTLRVGRAVYGTIDMLKDLIGSGR 130
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
++L +GRPGVGKTT +RE+ARVL+D+ KRV++VDTSNEIGGDGD+PH IG ARRMQV
Sbjct: 131 NVLLLGRPGVGKTTKLREVARVLADDLGKRVMVVDTSNEIGGDGDVPHPGIGGARRMQVS 190
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QH VMIEAVENHMPE IIVDEIGT AEA A R+IAERGV L+ TAHG LEN++ N
Sbjct: 191 RPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQLVATAHGNTLENLVLN 250
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GGV TVTL D+EAR RR QK++ ERKAPPTF ++EM R H T ++V
Sbjct: 251 PTLSDLVGGVHTVTLSDDEARRRRTQKTVSERKAPPTFDIVVEMVNRDEVRVHADTAEAV 310
Query: 303 DMLLRGK 309
D LL GK
Sbjct: 311 DRLLAGK 317
>gi|206896224|ref|YP_002246822.1| R3H domain-containing protein [Coprothermobacter proteolyticus DSM
5265]
gi|206738841|gb|ACI17919.1| R3H domain protein [Coprothermobacter proteolyticus DSM 5265]
Length = 515
Score = 332 bits (852), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 175/314 (55%), Positives = 224/314 (71%), Gaps = 6/314 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
ILP + ++L+ + L++++LDL R R+ + S VS ++++Y +
Sbjct: 16 ILPPWIAEKLRMNPMLSDLVDIVLDLKRPVVIRF--SSSQEVWESDLVSEDDIQYVVQHI 73
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
G FG DNRAG+EGTLHRIS IR+R+G I+GL+ R+GRA+ G +D + KS+L +G
Sbjct: 74 GTFGKDNRAGLEGTLHRISCIRNRQGRIIGLSIRIGRAIYGVVDPLTPYFTQEKSVLLMG 133
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
+PGVGKTT++RE+AR+LS ++QKRV++VDTSNEI GDGD+PH AIG ARRMQVP P QH
Sbjct: 134 KPGVGKTTLLREVARLLSVDYQKRVIVVDTSNEIAGDGDVPHPAIGLARRMQVPVPEQQH 193
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
VMIEAVENHMPEVIIVDEIG + E A R+IAERGV LI TAHG LENI+ NP LSDL
Sbjct: 194 DVMIEAVENHMPEVIIVDEIGRKEEVDAARTIAERGVQLIATAHGNTLENILVNPTLSDL 253
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSVDMLLRG 308
+GGV VTL DEEA R QK+ILERK PTF LIE+R R + H+ E++VD LLRG
Sbjct: 254 VGGVQVVTLSDEEAHRRGTQKTILERKTSPTFDILIEIRARGVYAIHEDVERAVDSLLRG 313
Query: 309 --KTPLVEIRKRDD 320
PLV +R +DD
Sbjct: 314 IPPNPLV-LRVKDD 326
>gi|194707358|gb|ACF87763.1| unknown [Zea mays]
Length = 554
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 169/289 (58%), Positives = 214/289 (74%), Gaps = 7/289 (2%)
Query: 33 LDLGRLPEARY-LGEFGGKYLRSTEVSVEELEYA--QSAVGEFGGDNRAGIEGTLHRISA 89
+DLGR P AR+ G+F L +S ++L +A S VG+FG DNRAGI TLHRISA
Sbjct: 1 MDLGRPPLARFPSGDF---LLSQRPISFDDLRHATSHSQVGDFGADNRAGISRTLHRISA 57
Query: 90 IRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDE 149
IR+RKG IVGLTCRVGRAV G +++ DL+ G S+L +G PGVGKTTV+REIAR+L+D+
Sbjct: 58 IRNRKGVIVGLTCRVGRAVPGSANLLQDLVKDGGSLLLIGPPGVGKTTVIREIARMLADD 117
Query: 150 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
++KRV+IVDTSNEIGGDGDIPH IG ARR+QVP +QHKV+IEAVENHMP+ I++DEI
Sbjct: 118 YKKRVMIVDTSNEIGGDGDIPHPGIGNARRLQVPNQDMQHKVLIEAVENHMPQAIVIDEI 177
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 269
GT+ EA A +IA+RG+ L+ TAHG +EN+I NP L L+GG+ +VTLGDEEA R Q
Sbjct: 178 GTKLEAMAASTIAQRGIQLVATAHGVTIENLIMNPSLEMLVGGIQSVTLGDEEANRRGVQ 237
Query: 270 KSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTPLVEIRK 317
K++LERK P TF E+ + H++ E +VD LL GK P EIRK
Sbjct: 238 KTVLERKGPSTFTCAAEIVSKKELRVHRSLEATVDALLAGKLPNFEIRK 286
>gi|242624308|ref|YP_003002226.1| conserved hypothetical plastid protein Ycf45 [Aureoumbra
lagunensis]
gi|239997416|gb|ACS36938.1| conserved hypothetical plastid protein Ycf45 [Aureoumbra
lagunensis]
Length = 340
Score = 328 bits (840), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 167/321 (52%), Positives = 227/321 (70%), Gaps = 5/321 (1%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAV 69
I P ++ L+N +L+E+I D+G+ PE R+ + + L +S +++ Y + +
Sbjct: 14 IFPYFVQKPLKNHPLLDELIEIIFDIGKCPEVRFSSKI--EVLSYRVISKQDMNYCLTKI 71
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVG 129
F NRAGI+ TLHRIS +R+R I+GLTCRVGR+V G + + D+L +SIL +G
Sbjct: 72 SNFNEKNRAGIKRTLHRISCLRNRDDQIIGLTCRVGRSVIGLTNKIRDILLLNRSILILG 131
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQH 189
RPGVGKTT++REIAR+LS+E +KRVVIVDTSNEI GD D+PH A+G ARR+QV +LQH
Sbjct: 132 RPGVGKTTIIREIARILSNELEKRVVIVDTSNEIAGDNDVPHVAVGRARRLQVKNSNLQH 191
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
+ +IEAVENHMPEVII+DEIGTE EA + R+IAERGV LI T HG LEN+IKNPIL DL
Sbjct: 192 QSLIEAVENHMPEVIIIDEIGTEIEALSARTIAERGVQLIATTHGNHLENLIKNPILMDL 251
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRG 308
IGG+ +VTL D+EA+ R +KSILERK TF +IE+ + W ++ E+SVD LL+G
Sbjct: 252 IGGIQSVTLSDQEAKNRHTKKSILERKFAATFNIIIEINNYNSWTIYENVEESVDFLLKG 311
Query: 309 KTPLVEIRK--RDDRFNVVVD 327
+ P ++R D ++ +V D
Sbjct: 312 QEPNKQVRTMLSDGKYTIVSD 332
>gi|310817928|ref|YP_003950286.1| single-stranded nucleic acid binding r3h [Stigmatella aurantiaca
DW4/3-1]
gi|309391000|gb|ADO68459.1| Single-stranded nucleic acid binding R3H [Stigmatella aurantiaca
DW4/3-1]
Length = 544
Score = 327 bits (839), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 181/307 (58%), Positives = 226/307 (73%), Gaps = 4/307 (1%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F +LPS L+ ++ + ++LEV++DLGR PEAR + G L + +LE
Sbjct: 30 FLLLVAVLPSSLQAAVRGLTP-AEVLEVVMDLGRPPEARLV--HGSVRLTEALIVQADLE 86
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
+ + VG G DNRAGIE TLHR+SAIR+RKG +VGLT RVGRAV G IDM+ DL+ G+
Sbjct: 87 HVLAQVGPPGEDNRAGIERTLHRVSAIRNRKGRVVGLTLRVGRAVFGTIDMLKDLIGTGR 146
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
++L +GRPGVGKTT +RE+ARVL+D+ +KRV++VDTSNEIGGDGDIPH IG ARRMQV
Sbjct: 147 NVLLLGRPGVGKTTKLREVARVLADDLRKRVMVVDTSNEIGGDGDIPHPGIGGARRMQVS 206
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
P QH VMIEAVENHMPE IIVDEIGT AEA A R+IAERGV L+ TAHG LEN++ N
Sbjct: 207 RPDRQHDVMIEAVENHMPEAIIVDEIGTSAEAAAARTIAERGVQLVATAHGNTLENLVLN 266
Query: 244 PILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEKSV 302
P LSDL+GGV TVTL DEEAR R QK++ ERKAPPTF +++M R + H+ T ++V
Sbjct: 267 PTLSDLVGGVHTVTLSDEEARRRNTQKTVSERKAPPTFDLVVQMVGRDEVLVHRDTAEAV 326
Query: 303 DMLLRGK 309
D LL G+
Sbjct: 327 DRLLAGQ 333
>gi|147841865|emb|CAN66926.1| hypothetical protein VITISV_011830 [Vitis vinifera]
Length = 678
Score = 327 bits (838), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 173/308 (56%), Positives = 224/308 (72%), Gaps = 15/308 (4%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTE-VSV 59
++ F +++P +R L ++ G L+EV++DLGR P AR+ G +L S + V +
Sbjct: 94 LSELDMFLELVPLRMRKELFGHAEIGDLIEVVMDLGRKPLARFPS---GDWLISEQIVKL 150
Query: 60 EELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL 119
E+L++A S VGEF DNR+GI +LHRISAIR+RK I+GLTCRVGR+VSG ++V DL+
Sbjct: 151 EDLQHAISKVGEFSDDNRSGINHSLHRISAIRNRKMQIIGLTCRVGRSVSGSAEIVRDLV 210
Query: 120 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARR 179
G SIL +G PGVGKTT++REIAR+L+DE KRVVIVDTSNEIGGDGD+PHS IG A+
Sbjct: 211 EGGGSILVIGPPGVGKTTLIREIARMLADEHMKRVVIVDTSNEIGGDGDVPHSGIGRAK- 269
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
VMIEAVENHMPE II+DEIGTE EA A +IA+RGV L+GTAHG ++N
Sbjct: 270 ---------EDVMIEAVENHMPETIIIDEIGTELEALAASTIAQRGVQLVGTAHGMTIDN 320
Query: 240 IIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKT 298
I+KNP L L+GG+++VTLGDEEAR R+ QK+ILERK PPTF +EM R H V H+
Sbjct: 321 IMKNPSLQILVGGIESVTLGDEEARKRKVQKTILERKGPPTFTCAVEMISRTHCRVHHRL 380
Query: 299 EKSVDMLL 306
+ +VD +L
Sbjct: 381 DATVDAIL 388
>gi|383459841|ref|YP_005373830.1| hypothetical protein COCOR_07880 [Corallococcus coralloides DSM
2259]
gi|380731791|gb|AFE07793.1| hypothetical protein COCOR_07880 [Corallococcus coralloides DSM
2259]
Length = 564
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 183/320 (57%), Positives = 227/320 (70%), Gaps = 4/320 (1%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEE 61
N F +LP L++ ++ + +LLEV++DLGR PEAR + G L V+ E
Sbjct: 9 NDFALLVAVLPPSLQEAVRQLPE-AELLEVVMDLGRPPEARLV--HGVARLSEAPVTQEA 65
Query: 62 LEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY 121
L+ + VGE GGDNRAGIE TLHR+SAIR+R+G +VGLT RVGRA+ G IDM+ DL+
Sbjct: 66 LQAVLAHVGEVGGDNRAGIERTLHRVSAIRNRQGRVVGLTLRVGRAIQGTIDMLRDLVES 125
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
G+++L +GRPGVGKTT +RE+ARVL+D KRV++VDTSNEIGGDGDIPH IG ARRMQ
Sbjct: 126 GRNLLLLGRPGVGKTTKLREVARVLADALGKRVMVVDTSNEIGGDGDIPHPGIGGARRMQ 185
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V P QH VMIEAVENHMPE I+VDEIGT AEA A R+IAERGV L+ TAHG LEN++
Sbjct: 186 VSRPDRQHDVMIEAVENHMPEAIVVDEIGTAAEAAAARTIAERGVQLVATAHGNTLENLV 245
Query: 242 KNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK-TEK 300
NP LSDL+GGV TVTL D+EAR R QK++ ERK PTF ++EM R H+ T
Sbjct: 246 LNPTLSDLVGGVQTVTLSDDEARRRGTQKTVTERKGTPTFDIVVEMVNRDEVRVHRDTGG 305
Query: 301 SVDMLLRGKTPLVEIRKRDD 320
+VD LL G E R++ D
Sbjct: 306 AVDRLLTGAEVGGEKRRQQD 325
>gi|88811456|ref|ZP_01126711.1| Single-stranded nucleic acid binding R3H [Nitrococcus mobilis
Nb-231]
gi|88791345|gb|EAR22457.1| Single-stranded nucleic acid binding R3H [Nitrococcus mobilis
Nb-231]
Length = 513
Score = 325 bits (833), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 178/303 (58%), Positives = 221/303 (72%), Gaps = 4/303 (1%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
+ILP L+ + +LLE++LDLGR P+AR + G L T V+ +LE
Sbjct: 13 LLRILPQPLQSAI-TALPSSELLEIVLDLGRRPQARLIQ--GALDLAGTPVTRLDLERIT 69
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
S VG F DNRAGIEGTLHR++AIR+R G +VGLT RVGRAV G ID ++DL+ G S+L
Sbjct: 70 STVGPFTADNRAGIEGTLHRVAAIRNRTGTVVGLTLRVGRAVFGTIDAIHDLIAQGGSLL 129
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G PG+GKTT +REIARVL+DE +RV+++DTSNEI GDGDIPH IG ARRMQV P
Sbjct: 130 LLGPPGIGKTTRLREIARVLADECARRVIVIDTSNEIAGDGDIPHPGIGCARRMQVAHPD 189
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH+VMIEAVENHMPEVIIVDEIGT AEA A R+IAERGV LIGTAHG LEN++ NP L
Sbjct: 190 RQHRVMIEAVENHMPEVIIVDEIGTSAEAAAARTIAERGVQLIGTAHGTTLENLVLNPTL 249
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTE-KSVDML 305
+DL+GGV TVTL DEEARAR QK++ ER PPTF ++E+ +R + H+ ++VD +
Sbjct: 250 ADLVGGVQTVTLSDEEARARGTQKTVSERCGPPTFDAVVEIVDRERLLIHRDAGRAVDAI 309
Query: 306 LRG 308
L G
Sbjct: 310 LSG 312
>gi|384248329|gb|EIE21813.1| hypothetical protein COCSUDRAFT_53863 [Coccomyxa subellipsoidea
C-169]
Length = 499
Score = 321 bits (823), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 164/264 (62%), Positives = 197/264 (74%), Gaps = 2/264 (0%)
Query: 33 LDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRS 92
+DLGR P AR G L ++ E+L YA S +G FG DNRAGI+ TLHRIS +R+
Sbjct: 1 MDLGRTPLARL--PSGDVRLSDDVITQEDLAYAISKLGAFGDDNRAGIDRTLHRISCMRN 58
Query: 93 RKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
R G I+GLTCR GRAV G DM DL+ G+SILF+GRPGVGKTTV+RE +R+LS QK
Sbjct: 59 RDGRIIGLTCRAGRAVPGSADMAADLIASGRSILFMGRPGVGKTTVIRETSRLLSQLHQK 118
Query: 153 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 212
RVVI+DTSNEIGGDGDI H IG ARRMQV + + QH+ MIEAVENHMPEV+IVDEIGTE
Sbjct: 119 RVVIIDTSNEIGGDGDIAHIGIGRARRMQVSKVAAQHRTMIEAVENHMPEVVIVDEIGTE 178
Query: 213 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 272
AEA A RSIA+RGV L+ TAHG L +IKNP LSDLIGG+ VTL DEEA+ R+ K++
Sbjct: 179 AEALAARSIAQRGVQLVATAHGGELARLIKNPTLSDLIGGIQAVTLSDEEAKRRKGPKTV 238
Query: 273 LERKAPPTFYFLIEMRERHYWVTH 296
+ER APPTF +E+ +R+ W H
Sbjct: 239 IERCAPPTFDVAVEIIDRNTWRVH 262
>gi|403225170|gb|AFR24782.1| conserved hypothetical plastid protein Ycf45 [uncultured
Pelagomonas]
Length = 330
Score = 314 bits (804), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 150/306 (49%), Positives = 214/306 (69%), Gaps = 3/306 (0%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
+ + P ++ L++ S +L+E++ D+G+ PEAR+ G L + +++ Y
Sbjct: 9 SLISVFPDFVQIPLKSYSTNSKLMEIVFDIGKYPEARFTS--GVVILAPRIICRQDMHYV 66
Query: 66 QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI 125
+ F NRAGI TLHRIS +++R+ I+GLTCRVGR++ G + + D+L + KSI
Sbjct: 67 LKRITAFNDKNRAGINKTLHRISCLKNREDQIIGLTCRVGRSIIGSTNKIRDILLHDKSI 126
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G+PG GKTT++REIAR+ S+E +KRVVIVDTSNEI GD D+PH A+G ARR+QV +
Sbjct: 127 LILGKPGSGKTTIIREIARIFSNELEKRVVIVDTSNEIAGDNDVPHVAVGRARRLQVKKF 186
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
LQH+V+IEAVENHMPEVII+DEI TE E + R+IAERGV LI TAHG L N++KNPI
Sbjct: 187 DLQHQVLIEAVENHMPEVIIIDEISTETETLSARTIAERGVQLIATAHGNSLVNLVKNPI 246
Query: 246 LSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDM 304
L +LIGG+ +VTL D+ A+ R +KS+LER+ TF +IE+ W+ + K E++VD+
Sbjct: 247 LVNLIGGIQSVTLSDQSAKLRNTKKSVLERQFAATFDLIIEISSSDSWIIYDKVEEAVDL 306
Query: 305 LLRGKT 310
+L G+
Sbjct: 307 ILNGEN 312
>gi|145327231|ref|NP_001077817.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
gi|332197302|gb|AEE35423.1| P-loop containing nucleoside triphosphate hydrolase [Arabidopsis
thaliana]
Length = 538
Score = 313 bits (803), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 154/250 (61%), Positives = 194/250 (77%), Gaps = 1/250 (0%)
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFV 128
VGEF DNRAGI TLHRISAIR+RKG I+GLTCRVGR+V G +++ DL+ G S+L +
Sbjct: 16 VGEFTNDNRAGISRTLHRISAIRNRKGEIIGLTCRVGRSVRGSANLLRDLVQDGNSLLLI 75
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
G PGVGKTT++RE+AR+L ++++KRV+IVDTSNEIGGDGDIPH IG ARRMQVP +Q
Sbjct: 76 GPPGVGKTTMIREVARMLGNDYEKRVMIVDTSNEIGGDGDIPHPGIGNARRMQVPNSDIQ 135
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
HKV+IEAVENHMP+VI++DEIGT+ EA A +IAERG+ L+ TAHG +EN+IKNP L
Sbjct: 136 HKVLIEAVENHMPQVIVIDEIGTKLEAIAASTIAERGIQLVATAHGATIENLIKNPSLDL 195
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLR 307
L+GGV +VTLGDEEA R QK++LERK P TF E+ + H++ E +VD +L
Sbjct: 196 LVGGVQSVTLGDEEATRRGGQKTVLERKGPSTFNCGAEIVSKTEVRVHRSLEATVDAILA 255
Query: 308 GKTPLVEIRK 317
G+ P VEIRK
Sbjct: 256 GRLPNVEIRK 265
>gi|303287638|ref|XP_003063108.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455744|gb|EEH53047.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 766
Score = 309 bits (792), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 184/422 (43%), Positives = 234/422 (55%), Gaps = 105/422 (24%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGK--YLRSTEVSVEELEYAQ 66
+LP + L +++ +L+EV+LDLGR+P AR FGG L ++ +++ A
Sbjct: 138 NLLPPAIASALLAHAQKLELVEVVLDLGRVPLAR----FGGADVALSDAPLTHDDIARAL 193
Query: 67 SAVGEFGGDNRAGIEGTLHRI--------------------------------------- 87
S VG+ G DNRAGI+ TLHRI
Sbjct: 194 SNVGDVGADNRAGIDRTLHRIRRVLLTLVLIRLRPRGARRSLRTFAGVSLRARHGFDPDA 253
Query: 88 ------SAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMRE 141
+R+R G IVG+TCRVGRA+ G DM+ DLL G+S+L +GRPGVGKTT +RE
Sbjct: 254 PRRLSTPVMRNRAGVIVGMTCRVGRAIEGGADMIRDLLVSGRSVLLLGRPGVGKTTAIRE 313
Query: 142 IARVLS----------------------------------DEFQ---------------- 151
IARVLS D FQ
Sbjct: 314 IARVLSGASYLTLDFSRRLSPPRVPRFQSRHTSTPFNSASDAFQLHPFNVRSYGQLPSDD 373
Query: 152 --KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
+RVV+VDTSNEIGGDGD+PH IG ARRMQV EPS QH +IEAV+NH P+V++VDEI
Sbjct: 374 CGRRVVVVDTSNEIGGDGDVPHPGIGGARRMQVTEPSEQHATLIEAVQNHTPQVVVVDEI 433
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ 269
GTE E A R+I++RGV +I TAHG LEN++KNP L+DL+GGV +VTLGD+EAR RR Q
Sbjct: 434 GTELECAAARTISQRGVQMIATAHGHTLENVLKNPSLNDLVGGVVSVTLGDDEARKRRAQ 493
Query: 270 KSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 328
K+ LER+ PPTF +E+RE WV H +VD LL G P VE+R DD V+ R
Sbjct: 494 KTTLEREGPPTFGAAVEIRETGKWVVHLDVGVAVDTLLAGYAPPVELRSVDDATGRVMSR 553
Query: 329 -W 329
W
Sbjct: 554 SW 555
>gi|30692846|ref|NP_849744.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
gi|110737929|dbj|BAF00902.1| hypothetical protein [Arabidopsis thaliana]
gi|332193461|gb|AEE31582.1| putative stage III sporulation protein AA [Arabidopsis thaliana]
Length = 303
Score = 296 bits (758), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 147/174 (84%), Positives = 159/174 (91%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEE 61
+ GAF +ILP DLR RL NDS+R QL+EVI+DLGR PEARYLGE GG+YLR+ EVS+EE
Sbjct: 44 DNLGAFLEILPKDLRHRLLNDSRRNQLVEVIMDLGRPPEARYLGEPGGQYLRNNEVSMEE 103
Query: 62 LEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY 121
LE AQ VGEFG DNRAGIEGTLHRISAIR+RKG IVGLTCRVGRAVSGHIDM+YDLLHY
Sbjct: 104 LEDAQELVGEFGADNRAGIEGTLHRISAIRNRKGFIVGLTCRVGRAVSGHIDMLYDLLHY 163
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
GKSILFVGRPGVGKTTV+REIARVLSDEFQKRVVI+DTSNEIGGDGDIPHSAIG
Sbjct: 164 GKSILFVGRPGVGKTTVLREIARVLSDEFQKRVVIIDTSNEIGGDGDIPHSAIG 217
Score = 149 bits (376), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 66/88 (75%), Positives = 78/88 (88%)
Query: 250 IGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRGK 309
IGG++TVTLGDEEARARR QKSILERKAPPTFYFLIEMRER YW+ H+TEKSVDMLLRG+
Sbjct: 216 IGGIETVTLGDEEARARRSQKSILERKAPPTFYFLIEMRERDYWIAHQTEKSVDMLLRGR 275
Query: 310 TPLVEIRKRDDRFNVVVDRWKTYDRHDI 337
P+VE+R+RD+ + VV++RWK YD I
Sbjct: 276 NPMVEVRRRDEEYKVVIERWKAYDGQGI 303
>gi|356534378|ref|XP_003535732.1| PREDICTED: uncharacterized protein ycf45-like [Glycine max]
Length = 568
Score = 295 bits (756), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 147/235 (62%), Positives = 186/235 (79%), Gaps = 2/235 (0%)
Query: 26 GQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLH 85
G L+EV++DLGR P AR+ G + ++ E+L +A S VGEF DNR+GI+ +LH
Sbjct: 76 GGLIEVVMDLGRKPLARFPS--GDWVISEQPIAQEDLRHAISKVGEFSDDNRSGIDRSLH 133
Query: 86 RISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARV 145
RISAIR+RK I+GLTCRVGRAV G +++ DL+ G SIL +G PGVGKTT++REIAR+
Sbjct: 134 RISAIRNRKMQIIGLTCRVGRAVGGSAEIIRDLVEDGGSILVIGPPGVGKTTLIREIARM 193
Query: 146 LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
L+DEF+KRVVIVDTSNEIGGDGD+PH+ IG ARR QVP ++QH VMIEA+ENHMPE II
Sbjct: 194 LADEFRKRVVIVDTSNEIGGDGDVPHAGIGRARRTQVPNVNMQHGVMIEAIENHMPETII 253
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGD 260
+DEIGTE EA A +IA+RGV L+GTAHG +ENIIKNP L L+GG+++VTLG+
Sbjct: 254 IDEIGTELEALAASTIAQRGVQLVGTAHGMTIENIIKNPYLQILVGGIESVTLGE 308
>gi|357168544|ref|XP_003581698.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein ycf45-like
[Brachypodium distachyon]
Length = 157
Score = 267 bits (682), Expect = 5e-69, Method: Compositional matrix adjust.
Identities = 128/156 (82%), Positives = 140/156 (89%)
Query: 142 IARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
+ARV++DEFQKR VIVDTSNEIGGDGDIPH+AIG ARRMQVPEPS+QH+VMIE VENHMP
Sbjct: 1 MARVVADEFQKRQVIVDTSNEIGGDGDIPHAAIGGARRMQVPEPSMQHRVMIEVVENHMP 60
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDE 261
EV+IVDEI TE EA ACRSI ERGVMLIGTAHGE L NIIKNP+LSDLIGGV TVTLGDE
Sbjct: 61 EVVIVDEIXTETEAQACRSIVERGVMLIGTAHGERLANIIKNPVLSDLIGGVKTVTLGDE 120
Query: 262 EARARRCQKSILERKAPPTFYFLIEMRERHYWVTHK 297
EARAR +SILERKAPP F FL+E+RE HYWVTH+
Sbjct: 121 EARARHTLRSILERKAPPAFPFLVELRELHYWVTHR 156
>gi|11465517|ref|NP_045092.1| hypothetical protein CycaCp075 [Cyanidium caldarium]
gi|14424118|sp|O19920.1|YCF45_CYACA RecName: Full=Uncharacterized protein ycf45
gi|2465740|gb|AAB82669.1| unknown [Cyanidium caldarium]
Length = 335
Score = 265 bits (677), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 141/317 (44%), Positives = 204/317 (64%), Gaps = 3/317 (0%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVE 60
N F ++P + L+ ++ L E++LD GR E R+ + + L +++ +
Sbjct: 4 FNDLRHFLPVVPRFVYKSLKKHPRKFGLTEIVLDNGRRAEGRWREK--TENLTHKKITKK 61
Query: 61 ELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH 120
L +G F DNRAGI TLHRIS I++R G IVGLT R+GR G ++ DL+
Sbjct: 62 HLLRCIKKIGIFNEDNRAGIYQTLHRISCIKNRYGNIVGLTYRIGREFIGIGPIIRDLIE 121
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 180
+S L +GRPG+GKT+ +REI+R+LS+E KRV+IVD++NEI G+G PH + G ARRM
Sbjct: 122 SNQSTLLIGRPGIGKTSFIREISRILSNEIMKRVIIVDSANEISGEGCCPHISTGKARRM 181
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
+V + QH+VMIEA+ENH PE+II+DEIGTE E+ A SI++RG+ LIG+AH L N+
Sbjct: 182 EVQSINSQHEVMIEAIENHTPEIIIIDEIGTEYESQAAISISQRGIRLIGSAHSSDLFNL 241
Query: 241 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKTE 299
KNP L L+GG+++VTL D +A R+ +K+ILERK F IE+ ++R V E
Sbjct: 242 AKNPTLCKLVGGIESVTLSDTQAILRKTKKTILERKGCSCFNATIEINKKRTVKVYTSVE 301
Query: 300 KSVDMLLRGKTPLVEIR 316
+S+D +L G+ +IR
Sbjct: 302 QSIDAILEGRVNNSQIR 318
>gi|440792694|gb|ELR13902.1| sporulation proteinrelated, putative [Acanthamoeba castellanii str.
Neff]
Length = 786
Score = 247 bits (630), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 154/332 (46%), Positives = 195/332 (58%), Gaps = 37/332 (11%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
G LP LRD L D + L+E++LDLGR AR+ G R E+S
Sbjct: 431 LGLILDALPEHLRDALLADGRLHGLVEIVLDLGRPLMARFSGP---GLPRVAEIS----- 482
Query: 64 YAQSAVGEFG-GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG 122
G G G+N +R G +VGLT RVG+ + G + MV D+L
Sbjct: 483 ------GRGGEGEN--------------VNRSGDVVGLTIRVGKTLRGLVTMVADVLARA 522
Query: 123 ----KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
SIL +G PG+GKT+V+RE+AR L+ E+ V+IVDTSNEI GDGDIPH AIG AR
Sbjct: 523 APCKASILLLGAPGMGKTSVIREMARELAREWS--VMIVDTSNEIAGDGDIPHPAIGAAR 580
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
RMQVP+ S QHK MIEAV+NH P+VIIVDEIGT EA AC +IA RGVML+ TAHG L
Sbjct: 581 RMQVPQASEQHKRMIEAVQNHTPDVIIVDEIGTAEEAKACCTIARRGVMLVATAHGVTLS 640
Query: 239 NIIKNPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERHYWVTH- 296
+++ NP L+ ++GGV+ V L D A AR QK++ E + P F IE+R R WV H
Sbjct: 641 DVVDNPSLNSVVGGVEAVILSDAAALARGSAQKTVRESRGPSAFGLAIELRSRSEWVVHD 700
Query: 297 KTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDR 328
+V+ LL GK VE+R+R VV R
Sbjct: 701 DVRANVNRLLAGKPMAVEVRRRLADGRVVATR 732
>gi|290995997|ref|XP_002680569.1| predicted protein [Naegleria gruberi]
gi|284094190|gb|EFC47825.1| predicted protein [Naegleria gruberi]
Length = 303
Score = 244 bits (624), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 137/290 (47%), Positives = 195/290 (67%), Gaps = 9/290 (3%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKR--GQLLEVILDLGRLPEARYLGEFGGKYLRSTE-V 57
+N +F + P ++++L S L+EV +D GR P + Y T V
Sbjct: 20 INQIYSFLDLFPKKIQEQLSTISGEDVNNLIEVAMDKGR-PYELFFYHKKEPYSNPTFIV 78
Query: 58 SVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD 117
EE++ + + FG DNRAG++G+LHRISA+ +R+ I+GLT RVGRAV G + D
Sbjct: 79 KQEEIDEIVNKLS-FGTDNRAGMDGSLHRISAMLNREAKIIGLTLRVGRAVMGRAKVFSD 137
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 177
L+ GKSIL +G+PG GKTT +R+ A+ LS+ +RVV+VDTS EIGG GDIPH AIG A
Sbjct: 138 LIEEGKSILLLGKPGAGKTTFIRDFAKTLSES--RRVVVVDTSCEIGGFGDIPHVAIGKA 195
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RRMQV + Q +VMI+AV+NH PEVI++DEIGT+ E R+I++RGV+L G+AHG+ +
Sbjct: 196 RRMQVADIRRQQEVMIQAVQNHTPEVIVIDEIGTKDEVSTARTISQRGVILCGSAHGD-M 254
Query: 238 ENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 287
++I+KNPIL DL+GGV++V +GD A +R +K L+ KA P F +I++
Sbjct: 255 KSILKNPILCDLLGGVESVIMGDRNA-SRDGEKMRLQLKADPVFDVVIQL 303
>gi|326500622|dbj|BAJ94977.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 220
Score = 238 bits (608), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/152 (78%), Positives = 133/152 (87%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F + +QILP DLRD LQN+ +R QLLEVILDLGR PEAR+LG GG+YLR E+S ELE
Sbjct: 69 FYSPFQILPKDLRDNLQNEPRRDQLLEVILDLGRQPEARFLGNSGGQYLRDNEISQLELE 128
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
AQ AVGEFG DNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +
Sbjct: 129 EAQRAVGEFGRDNRAGIEGTLHRISAIRSRKGLVVGLTCRVGRAVNGHVDMVRDLLNYKE 188
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV 155
SILF+GRPGVGKTTVMREIARVL+DEFQKRVV
Sbjct: 189 SILFLGRPGVGKTTVMREIARVLADEFQKRVV 220
>gi|414865049|tpg|DAA43606.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 209
Score = 238 bits (606), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 117/148 (79%), Positives = 133/148 (89%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
QILP DLRD LQN+ ++ QLLEVILDLGR PEAR+LG+ GG+YLR +E+S +ELE AQ
Sbjct: 60 LLQILPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQKELEDAQ 119
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
AVGEFGGDNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +SIL
Sbjct: 120 KAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESIL 179
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRV 154
F+GRPGVGKTTVMREIARVL+DEFQKRV
Sbjct: 180 FLGRPGVGKTTVMREIARVLADEFQKRV 207
>gi|307109172|gb|EFN57410.1| hypothetical protein CHLNCDRAFT_21069 [Chlorella variabilis]
Length = 258
Score = 232 bits (592), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 129/244 (52%), Positives = 163/244 (66%), Gaps = 14/244 (5%)
Query: 78 AGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI------DMVYDLLHYGKSI-----L 126
AGI GTLHR+SA+R R+G I GLT RVGR V G V H S +
Sbjct: 10 AGIPGTLHRVSAMRDRQGGIAGLTYRVGRHVPGGPPPPAADGCVAACAHSSSSCCCCSSI 69
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
G PGVGKTT++R++A +LSD F ++VV+VDTSNE+ GDG PH+ IG+ARRM VP S
Sbjct: 70 LQGGPGVGKTTLLRDVASLLSDTFSQKVVVVDTSNEVAGDGSEPHACIGSARRMMVP--S 127
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
QH VMIE V+NHMP+V+IVDEIGT E ACRSIA RGV+L+GTAHG L+ +++NP L
Sbjct: 128 QQHSVMIETVQNHMPDVVIVDEIGTAREVEACRSIAHRGVVLVGTAHGRSLKALMRNPDL 187
Query: 247 SDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDML 305
+ LIGG+ VTLGDEEAR K+ ER+ P F L+E+ R W H + +SVD +
Sbjct: 188 NGLIGGIHQVTLGDEEARRSNHGKTRTERRGEPAFSTLVEVLSRSRWRVHMSVARSVDDM 247
Query: 306 LRGK 309
L G+
Sbjct: 248 LAGR 251
>gi|291000444|ref|XP_002682789.1| predicted protein [Naegleria gruberi]
gi|284096417|gb|EFC50045.1| predicted protein [Naegleria gruberi]
Length = 282
Score = 232 bits (591), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 127/260 (48%), Positives = 176/260 (67%), Gaps = 6/260 (2%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKRG--QLLEVILDLGRLPEARYLGEFGGKYLRSTEVS 58
+N +F ++ P ++++L S L+EV +D GR E Y + S V
Sbjct: 27 INQIYSFLELFPKKIQEQLSTISGEDVMNLIEVAMDKGRPYELFYYHKKESHIDNSFIVK 86
Query: 59 VEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDL 118
E+++ S + FG DNRAGI+G LHRISA+ +R I+GLT RVGRAV G + DL
Sbjct: 87 QEDIDEVVSKL-SFGTDNRAGIDGALHRISAMLNRSEKIIGLTLRVGRAVMGRSKVFSDL 145
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
+ GKSIL +G+PG GKTT +R+ A+ LS+ +RVV+VDTS EIGG GD+PH AIG AR
Sbjct: 146 IEQGKSILLLGKPGSGKTTFIRDFAKTLSES--RRVVVVDTSCEIGGFGDVPHVAIGKAR 203
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
RMQV + Q +VMI+AV+NH PEVI++DEIGT E R+IA+RGV+L G+AHG+ ++
Sbjct: 204 RMQVADIRRQQEVMIQAVQNHTPEVIVIDEIGTRDEVSTARTIAQRGVVLCGSAHGD-MK 262
Query: 239 NIIKNPILSDLIGGVDTVTL 258
+I+KNPIL DL+GGV++V +
Sbjct: 263 SILKNPILCDLLGGVESVIM 282
>gi|440794844|gb|ELR15989.1| R3H domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 441
Score = 229 bits (583), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/236 (52%), Positives = 165/236 (69%), Gaps = 16/236 (6%)
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK----S 124
VG G DNRAG+ TLHRIS ++++ G VG+T RVG+ +SG + MV D+L S
Sbjct: 190 VGWGGLDNRAGLSKTLHRISRLQNQAGQAVGVTIRVGKTISGLVPMVADVLQRAAERKAS 249
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
IL +G PG+GKT+V+RE+AR L++E+ V+IVDTSNEI G GDIPH+AIG ARRMQV
Sbjct: 250 ILLLGSPGMGKTSVLREMARELANEWS--VMIVDTSNEIAGAGDIPHTAIGEARRMQVLP 307
Query: 185 PSLQHKVMIEAVENHMPEVIIVDE---------IGTEAEAHACRSIAERGVMLIGTAHGE 235
S QHK MIEAV+NH P++IIVDE IGT++EA AC +IA RGVML+ TAHG
Sbjct: 308 GSGQHKCMIEAVQNHTPDIIIVDEVCPISEWPCIGTKSEAAACCTIARRGVMLVATAHGL 367
Query: 236 WLENIIKNPILSDLIGGVDTVTLGDEEARARRCQ-KSILERKAPPTFYFLIEMRER 290
L++++ NP L+ ++GGV +VTLGD+ R R + K++ E K P F IE+R R
Sbjct: 368 TLQDVVDNPGLNSVVGGVQSVTLGDDAVRERGAKHKTVRECKGPSAFAVAIELRSR 423
>gi|110740513|dbj|BAE98362.1| hypothetical protein [Arabidopsis thaliana]
Length = 449
Score = 223 bits (568), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 135/174 (77%), Gaps = 1/174 (0%)
Query: 145 VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 204
+L+DE +KRVVIVDTSNEIGGDGD+PHS IG ARRMQVP +LQH VMIEAVENHMPE I
Sbjct: 1 MLADEHRKRVVIVDTSNEIGGDGDVPHSGIGRARRMQVPNVNLQHDVMIEAVENHMPETI 60
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEAR 264
I+DEIGTE EA A +IA+RGV L+ TAHG ++NIIKNP L LIGG+++VTLGDEEAR
Sbjct: 61 IIDEIGTELEALAASTIAQRGVQLVATAHGMTIDNIIKNPSLQILIGGIESVTLGDEEAR 120
Query: 265 ARRCQKSILERKAPPTFYFLIEMRERHYWVTH-KTEKSVDMLLRGKTPLVEIRK 317
R+ QK+ILERK PPTF +EM R H + + +VD +L GK+ EIR+
Sbjct: 121 KRKVQKTILERKGPPTFTCAVEMISRTECRVHQRLDVTVDAILAGKSAPFEIRQ 174
>gi|290985586|ref|XP_002675506.1| predicted protein [Naegleria gruberi]
gi|284089103|gb|EFC42762.1| predicted protein [Naegleria gruberi]
Length = 508
Score = 220 bits (561), Expect = 6e-55, Method: Compositional matrix adjust.
Identities = 127/317 (40%), Positives = 190/317 (59%), Gaps = 17/317 (5%)
Query: 2 NAFGAFWQILPSDLRDRLQNDSKRG--QLLEVILDLGRLPEARYLGEFGGKYLRSTEVSV 59
N ++I P + +R++ QL+E+++D+ + P Y + K E
Sbjct: 170 NQLDELFEIFPIEFAERVKAKCGENLDQLVEIVMDIKK-PLRLYYYQQDEK----DETCT 224
Query: 60 EELEYAQSAVGE--FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD 117
+ + S FG D+RAGI GTLHR+S I SR G ++GLT R+GRAV G ++ D
Sbjct: 225 IDYQILNSICQNLIFGQDDRAGISGTLHRVSRITSRIGNVIGLTIRIGRAVVGIGELFKD 284
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 177
+ + ++IL VG P GK+T++R+++RVLS+ Q RVVIVDTS EI G GD+PHSA G +
Sbjct: 285 VTNSNENILLVGIPNSGKSTLIRDLSRVLSE--QNRVVIVDTSCEIAGLGDVPHSATGDS 342
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V +P Q M+ AV+NH P+VI++DEI E CR+I++RGV L +AHG L
Sbjct: 343 RRIPVKDPKNQRVDMLRAVQNHSPQVIVIDEISDSKEVQTCRTISQRGVRLCASAHG-TL 401
Query: 238 ENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHY----W 293
E ++ NP+L DL+GGV VT+ D+ AR + QK I + K P F +IE+++ W
Sbjct: 402 EKLLVNPVLRDLLGGVGDVTVSDDSARQKGGQKIINQMKGSPIFGIIIEVKKSQNGDTEW 461
Query: 294 VTHKTEK-SVDMLLRGK 309
+ + K +V +L G+
Sbjct: 462 IIYNNVKETVRSILNGQ 478
>gi|390337533|ref|XP_785121.2| PREDICTED: uncharacterized protein LOC579939 [Strongylocentrotus
purpuratus]
Length = 1849
Score = 220 bits (561), Expect = 6e-55, Method: Composition-based stats.
Identities = 114/288 (39%), Positives = 176/288 (61%), Gaps = 9/288 (3%)
Query: 27 QLLEVILDLGRLPEARYL-----GEFGGKYLRSTEVSVEEL-EYAQSAVGEFGGDNRAGI 80
QL EV++DLGR P ARY G+ K + +++ ++L + + D+R+ I
Sbjct: 1527 QLTEVVMDLGRKPSARYYQPGHPGQLKIKTIGENKLTKQDLKDILEGHCSPVSSDHRSTI 1586
Query: 81 EGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMR 140
+ TLHR+ + +R+ +GLT AV G ++DL++ G+SILFVG PGVGK+T++R
Sbjct: 1587 KETLHRVGIMCNRQNEPIGLTTLTKHAVLGCATPLFDLMNQGQSILFVGSPGVGKSTILR 1646
Query: 141 EIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHM 200
E ARV++D +RVVIVDT NEI GDGD+PH A+G ARR+Q+P+ Q ++ E V NH
Sbjct: 1647 EAARVINDVVMRRVVIVDTCNEIAGDGDVPHPAVGGARRVQLPDRDSQPNMIREIVRNHS 1706
Query: 201 PEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGD 260
P +++DE+ TEA+A A + ERG+ +I A G+ L+++I NP L L GG+ + +
Sbjct: 1707 PHTLVIDEVVTEADAAAVHATRERGIQVISAAPGQTLQDVILNPKLRHLFGGIHNMAMSH 1766
Query: 261 EEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLR 307
+I++R P F L+EM +RH W+ H +S+D+ L+
Sbjct: 1767 PGQGI--TGHTIMQRTQPAAFDILVEMYDRHRWIVHTDFTRSIDLCLQ 1812
>gi|397568725|gb|EJK46301.1| hypothetical protein THAOC_35034 [Thalassiosira oceanica]
Length = 710
Score = 209 bits (532), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 136/349 (38%), Positives = 194/349 (55%), Gaps = 42/349 (12%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLP-----EARYLGEFGGKYLRSTEVSVE 60
+ ILP++ + L+ G + +V LD+GR P + RY +YL V +
Sbjct: 354 SLLDILPAEWGESLEEIGLDG-ISDVSLDIGRRPYCWHSKRRYYLSSDTEYL----VEHD 408
Query: 61 ELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH 120
+L+ + EFG DNRAG++G LHRISAIR + I+GLT RVGR V G+ ++ DLL
Sbjct: 409 DLKEIILNLQEFGDDNRAGLDGQLHRISAIRDNQELIIGLTIRVGRHVEGNAALIRDLLA 468
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRV---------------------VIVDT 159
+SIL +G PG GKTT++R+IA+ LSD + VDT
Sbjct: 469 DDRSILLLGEPGSGKTTIVRDIAKELSDRANVFIGKWSTFPCLFGGSSLTSNPPHAAVDT 528
Query: 160 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 219
SNEI GDG +PH +G +RRM VP Q VM+E ++NH PEV+++DEIG E A +
Sbjct: 529 SNEIAGDGGVPHPCVGMSRRMMVPSLRDQASVMVECLQNHTPEVMVIDEIGRGREVEAAQ 588
Query: 220 SIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARR-------CQKSI 272
+ RGV +I +AHG+ L +++KN L LIGG+ T T+GD EAR + QK +
Sbjct: 589 TSKNRGVRMIASAHGD-LRSLMKNRELRGLIGGLATTTVGDMEARRMQKKTGGEILQKQV 647
Query: 273 LERKAPPTFYFLIEMRE---RHYWVTHKTEKSVDMLLRGKTPLVEIRKR 318
+R A P F +IE+R + + +VD +L+GKT V+ R R
Sbjct: 648 TQRAAAPIFETIIELRRGRLNEWHIIPDVATAVDAVLKGKTYDVQKRIR 696
>gi|301109912|ref|XP_002904036.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262096162|gb|EEY54214.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 392
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 133/331 (40%), Positives = 190/331 (57%), Gaps = 24/331 (7%)
Query: 6 AFWQILPSDLRDRLQN-DSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEY 64
+ ++LP RD ++ D+ +L+++ +D+GR P A Y G+ + L + + SV E
Sbjct: 59 SLLKLLPGSYRDAVREVDNYHFRLVDICIDVGRAPFA-YTGK-KQRVLLTKDGSVVSKET 116
Query: 65 AQSAVGEFGG------DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDL 118
V GG DNRAGI+ HRIS +RS+ + GLT RVGRA+ ++ DL
Sbjct: 117 IDEVVKNLGGEMRIGNDNRAGIDRQRHRISVMRSKTDEVYGLTMRVGRALRNAACVLTDL 176
Query: 119 L----HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 174
L H KS+L +G PG GKTT++R++AR +S E + V I+DTSNEIGGDG +PH +
Sbjct: 177 LLSNKHANKSVLVLGHPGSGKTTLIRDVARCVS-ETMENVCIIDTSNEIGGDGLVPHECV 235
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
G ARRM VP Q VM+E V+NH E +IVDEIG +AE A ++ +RG LI +AHG
Sbjct: 236 GWARRMMVPSLEAQAGVMVECVQNHTVETLIVDEIGRKAEVLAASTVRQRGPRLIASAHG 295
Query: 235 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM------R 288
++ +IKNP L L+GG VT+GD+EA++ K +R P F ++E+ R
Sbjct: 296 DF-RALIKNPDLKGLVGGSQQVTIGDKEAKSLNKGKLQTQRAGNPIFDVIVELDHVVRGR 354
Query: 289 ERHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 319
R W +VD +L G E R+ D
Sbjct: 355 CRIIW---DVATAVDNVLEGNDYAFETRRWD 382
>gi|428178844|gb|EKX47717.1| hypothetical protein GUITHDRAFT_69358 [Guillardia theta CCMP2712]
Length = 353
Score = 206 bits (523), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 125/314 (39%), Positives = 178/314 (56%), Gaps = 26/314 (8%)
Query: 11 LPSDLRDRLQN--DSKRGQLLEVILDLGRLPEARYLGEFGGKYLRS--TEVSVEELE--- 63
LP+ +R RLQ K L E+ L LGR PEA + G+ R +V+ E+ +
Sbjct: 3 LPAPVRARLQEQFSDKLRDLNEIYLQLGRWPEAVFANPHTGQLYREPLAQVNCEQSDIAL 62
Query: 64 ----YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGA------IVGLTCRVGRAVSGHID 113
++++ G R GI+GTLHR+S I S + + ++G+T RVG+ V G +D
Sbjct: 63 FAEMFSKTHTGSLLATRRIGIDGTLHRLSVILSHRTSSEGVPSVIGVTARVGKTVEGTLD 122
Query: 114 -MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS 172
+ DLL S+L +GRP GKTT +RE AR LS++ + VV+VD + EIGGDG +PH
Sbjct: 123 SLAPDLLQSTGSVLLIGRPNSGKTTCLREFARRLSEDKNQIVVVVDKTCEIGGDGIVPHP 182
Query: 173 AIGTARRMQVPEP-------SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
AIG AR + V +LQH+ M EAVEN P V+IVDEI + E A R++++RG
Sbjct: 183 AIGNARWLPVETLKKDGQMFNLQHERMREAVENQSPHVVIVDEISSATEVEAIRTMSQRG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARR-CQKSILERKAPPTFYFL 284
+ +I HG L ++ +P + L GG TV L EEA R+ QKS+L R P F
Sbjct: 243 IRIIAAVHGGTLPMLLHDPDRAALTGGCHTVLLSGEEANKRKDKQKSVLMRMHEPMFQMA 302
Query: 285 IEMRERHYWVTHKT 298
+EM ER+ W+ H+
Sbjct: 303 VEMHERNRWILHRN 316
>gi|298705543|emb|CBJ28810.1| expressed unknown protein [Ectocarpus siliculosus]
Length = 305
Score = 205 bits (522), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 118/265 (44%), Positives = 166/265 (62%), Gaps = 19/265 (7%)
Query: 70 GEFGGDNRAGIEGTLHRISAIRSRKGA-IVGLTCRVGRAVSGHIDMVYDLLHY------- 121
G+F GDNRAG+ G LHRIS +R R+G I G+T R+GR G +V DLL +
Sbjct: 10 GKFAGDNRAGVPGQLHRISVMRGREGRRIFGVTLRIGRYFPGSAGLVDDLLFHVQGSPDK 69
Query: 122 ---GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPH-SAIGTA 177
S+L +G+PG GKTTV+R+I R +S E + VVIVDTSNEI GDG IPH +AIG +
Sbjct: 70 PERAASVLVLGKPGCGKTTVLRDICRKISQE--QTVVIVDTSNEIAGDGHIPHLAAIGQS 127
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RRM VP+ + QH VM EA++NH P+ I+VDE+ + EA AC I RGV ++ +AHG+ L
Sbjct: 128 RRMMVPDKTDQHNVMKEALQNHTPQTIVVDEVSNKNEARACLDIKARGVRVVASAHGD-L 186
Query: 238 ENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSIL-ERKAPPTFYFLIEMR--ERHYW- 293
+++++NP L+ L+GG +VTLGD A A + +R P F ++E+ + + W
Sbjct: 187 QSLLENPELNTLVGGTTSVTLGDAMAIATNAGNKVQRQRAGAPIFDTIVELERGQVNKWT 246
Query: 294 VTHKTEKSVDMLLRGKTPLVEIRKR 318
+ + +VD +L GK V R R
Sbjct: 247 IVWNVDLAVDAILSGKPYKVSQRTR 271
>gi|218297092|ref|ZP_03497763.1| AAA ATPase [Thermus aquaticus Y51MC23]
gi|218242506|gb|EED09044.1| AAA ATPase [Thermus aquaticus Y51MC23]
Length = 319
Score = 205 bits (521), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 128/318 (40%), Positives = 188/318 (59%), Gaps = 36/318 (11%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLG-RLP-----EARYLGEFGGKYLRSTEV 57
F A Q LP +R ++ QL E+ +DLG RL EARY EV
Sbjct: 12 FAALMQKLPPWVRQEVEGHGP--QLEEIAMDLGARLAYTVDGEARY---------SEREV 60
Query: 58 SVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD 117
S E+L++ VG F +NRAGIEGTLHR+S I+S G + G+T RVG+ V G + +
Sbjct: 61 SKEDLQFVLHRVGGFKENNRAGIEGTLHRVSRIQSALGEMTGITIRVGKFVEGVAEPLRP 120
Query: 118 LLHYGK-SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 176
L G+ SIL VG P GKTT++R++ R+L++ + RV++VDTSNEIGGDG IPH I
Sbjct: 121 YLLDGQGSILLVGPPRTGKTTLLRDVVRILAERWGSRVLVVDTSNEIGGDGLIPHPGIRP 180
Query: 177 ARRMQVPEPS--LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
ARRMQVP+P Q +++ +A+ NH PE+++VDEIG + + C + + RGV ++ TAHG
Sbjct: 181 ARRMQVPDPPAKTQGRIIYQAIANHSPEIVVVDEIGYNEDVYECLTASRRGVRVVATAHG 240
Query: 235 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 294
E L ++++NP L + LGD + +AR ER++ P+F +++ + +V
Sbjct: 241 EKLLDVLENPALHPV--------LGDPDLKAR-------ERRSRPSFQMALQVVGKGRFV 285
Query: 295 THK-TEKSVDMLLRGKTP 311
+ K++D LL G P
Sbjct: 286 LYPDLAKALDELLEGNEP 303
>gi|390337535|ref|XP_784840.3| PREDICTED: uncharacterized protein ycf45-like [Strongylocentrotus
purpuratus]
Length = 441
Score = 199 bits (505), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 122/325 (37%), Positives = 184/325 (56%), Gaps = 20/325 (6%)
Query: 7 FWQILPSDLRDRLQNDSKRG------QLLEVILDLGRLPEARYL-----GEFGGKYLRST 55
F + P+ ++ LQ S+ QL EV+LD+GR P ARYL E K L
Sbjct: 92 FVEAFPASIQLALQQLSQESSSYSFIQLAEVVLDVGRKPRARYLKSGLSSEMMEKVLNRD 151
Query: 56 EVSVEELEYAQSAVGEFGGDNRAG-IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
EV+ ++L+ G N G + TLHR+ + + +G ++G+T +V + G +
Sbjct: 152 EVTKQDLKGILEDSGFARTSNSQGMVRDTLHRLGLLANIQGEVIGITAKVEHPLPGCLSP 211
Query: 115 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 174
+YD+ + GKSIL VG GVGKTT++RE ARVLSD +K V+I+DT +EI G+GDIPH +I
Sbjct: 212 LYDIFNKGKSILVVGPTGVGKTTLLREAARVLSDVEKKNVMIIDTLSEIAGEGDIPHQSI 271
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
G+ARR+QV E +LQHKVM E +NH PE++I+DEI + EA + RG+ LI G
Sbjct: 272 GSARRLQVIESNLQHKVMSEVYQNHRPEIVIIDEISSLEEAEKTLDMKLRGIQLIAGVQG 331
Query: 235 EWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWV 294
+ L +++ N L+ + GG+ ++G R R P F L+EM + W+
Sbjct: 332 KTLADVLLNTALTPITGGIKE-SVGYPGGVPGRL------RTGPVVFDVLVEMLDMERWI 384
Query: 295 TH-KTEKSVDMLLRGKTPLVEIRKR 318
H + ++D +L G +E+ +R
Sbjct: 385 IHWDFQWAIDAVLPGGRRTLEVEER 409
>gi|348667950|gb|EGZ07775.1| hypothetical protein PHYSODRAFT_529219 [Phytophthora sojae]
Length = 397
Score = 193 bits (491), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 127/335 (37%), Positives = 182/335 (54%), Gaps = 27/335 (8%)
Query: 4 FGAFWQILPSDLRDR-LQNDSKRGQLLEVILDLGRLP-------EARYLGEFGGKYLRST 55
G +LP+D RD L D + +L+++ LD+GR+P + L + G + T
Sbjct: 60 LGPMLDLLPADYRDAILAIDDYKNRLVDICLDVGRVPYVYTGKKQRVVLSKHGATVAKDT 119
Query: 56 EVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMV 115
++E+ G DNRAGI+ LHRIS +RS+ + GLT RVGRA+ ++
Sbjct: 120 ---IDEILSNLGGEMRIGDDNRAGIDRQLHRISVMRSKTDEVYGLTMRVGRALRNAACVL 176
Query: 116 YDLL----HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPH 171
DLL H KS+L +G G GKTT++R++AR +S E + V I+DTSNEIGGDG +PH
Sbjct: 177 TDLLLSARHADKSVLVLGHSGSGKTTLIRDVARCVS-ETMENVCIIDTSNEIGGDGLVPH 235
Query: 172 SAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 231
+G ARRM V Q VM+E V+NH E +IVDEIG AE A ++ +RG LI +
Sbjct: 236 ECVGWARRMMVRSLEAQAGVMVECVQNHTVETLIVDEIGRRAEVLAASTVRQRGPRLIAS 295
Query: 232 AHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI-LERKAPPTFYFLIEM--- 287
AHG++ ++KNP L L+GG V +GD A + + +R P F ++E+
Sbjct: 296 AHGDF-RALLKNPDLKGLVGGSQQVIVGDSAAAQSASKSKLQTQRAGNPIFDVIVELDHV 354
Query: 288 ---RERHYWVTHKTEKSVDMLLRGKTPLVEIRKRD 319
R R W K+VD + G E R+ D
Sbjct: 355 VRGRCRVIW---DVAKAVDSVFEGNGYAFETRQWD 386
>gi|340054200|emb|CCC48495.1| conserved hypothetical protein [Trypanosoma vivax Y486]
Length = 537
Score = 193 bits (490), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 118/283 (41%), Positives = 166/283 (58%), Gaps = 14/283 (4%)
Query: 30 EVILDLGRLPEARYLGEFGGKY-LRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRIS 88
E + LG+ E R GG++ L++ + EL++ V FG D R I+ T HR+S
Sbjct: 163 EFFIHLGQAVEVR-----GGEWVLQTPPPTATELQHTLKRVSHFGDDGRGCIKNTPHRVS 217
Query: 89 AIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLS- 147
R R G +G+T RVGR V + L + G S+L V + GVGKTT++R+IA LS
Sbjct: 218 LWRGRCGEPLGVTIRVGRFVPNVAQALLPLANQG-SLLIVSKAGVGKTTLLRDIATSLSR 276
Query: 148 DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
+ RVV+VDTSNEIGGD +P +G RR+QVP Q +M + ++NH PE ++VD
Sbjct: 277 KPCRPRVVVVDTSNEIGGDSPVPLPFLGRCRRIQVPRREDQGDLMKQVLQNHSPEYVVVD 336
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARAR- 266
EI T AEA A SI++RGV LI T HGE L +++N L+ L+GG L +EE R R
Sbjct: 337 EISTAAEAEAAWSISQRGVCLIATCHGESLAGVLQNQTLNLLVGGTAQAFLSNEERRLRN 396
Query: 267 RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDMLL 306
+ +K++LER P F F+ E+ R H +V ++VD LL
Sbjct: 397 KLKKTVLERPYPSPFKFVAELNSRNTAHVYV--DVNQAVDCLL 437
>gi|223949555|gb|ACN28861.1| unknown [Zea mays]
gi|414865050|tpg|DAA43607.1| TPA: hypothetical protein ZEAMMB73_327805 [Zea mays]
Length = 192
Score = 192 bits (488), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 96/132 (72%), Positives = 114/132 (86%), Gaps = 1/132 (0%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
QILP DLRD LQN+ ++ QLLEVILDLGR PEAR+LG+ GG+YLR +E+S +ELE AQ
Sbjct: 60 LLQILPRDLRDNLQNEPRKDQLLEVILDLGRRPEARFLGDSGGQYLRDSEISQKELEDAQ 119
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
AVGEFGGDNRAGIEGTLHRISAIRSRKG +VGLTCRVGRAV+GH+DMV DLL+Y +SIL
Sbjct: 120 KAVGEFGGDNRAGIEGTLHRISAIRSRKGMVVGLTCRVGRAVTGHVDMVRDLLNYKESIL 179
Query: 127 FVGRPGVGKTTV 138
F+GR GK+++
Sbjct: 180 FLGRL-YGKSSI 190
>gi|384432170|ref|YP_005641529.1| AAA ATPase [Thermus thermophilus SG0.5JP17-16]
gi|333967638|gb|AEG34402.1| AAA ATPase [Thermus thermophilus SG0.5JP17-16]
Length = 310
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 122/312 (39%), Positives = 182/312 (58%), Gaps = 24/312 (7%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F A + LP +R ++ R L E+ +DLG P A Y + +Y E++ E+L
Sbjct: 12 FAALMEKLPPWVRKEVEPHGAR--LEEIAMDLG-APLA-YTVDGEARY-SDREITKEDLS 66
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYG 122
+ VG F +NRAGIEGTLHR+S I+S G + G+T RVG+ V G + + LL G
Sbjct: 67 FVLHRVGGFKENNRAGIEGTLHRVSRIQSALGEMTGITIRVGKFVEGVAEPLRPYLLESG 126
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
S+L VG P GKTT++R+I R+L++ + RVV+VDTSNEIGGDG H I ARRMQV
Sbjct: 127 GSLLVVGPPRTGKTTLLRDIVRILAERWGPRVVVVDTSNEIGGDGLTAHPGIRPARRMQV 186
Query: 183 PEPSL--QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
P+P Q +++ +A+ NH PEV++VDEIG + C + + RGV ++ TAHGE L ++
Sbjct: 187 PDPPSRNQGRIIYQAIANHSPEVVVVDEIGYNEDVQECLTASRRGVRVVATAHGERLLDV 246
Query: 241 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTE 299
++NP L ++G D +E R R+ P+F +++ + Y V
Sbjct: 247 LENPALHPVLGEPDL-----KEGR----------RRTRPSFGTALQVVAKGRYLVYPDLA 291
Query: 300 KSVDMLLRGKTP 311
+++D LL+G+ P
Sbjct: 292 QALDDLLQGREP 303
>gi|386361866|ref|YP_006061707.1| hypothetical protein [Thermus thermophilus JL-18]
gi|383510893|gb|AFH40323.1| hypothetical protein TtJL18_2503 [Thermus thermophilus JL-18]
Length = 310
Score = 191 bits (485), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 121/312 (38%), Positives = 179/312 (57%), Gaps = 24/312 (7%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F A + LP +R ++ R L E+ +DLG P A + G E++ E+L
Sbjct: 12 FAALMEKLPPWVRKEVEPHGAR--LEEIAMDLG-APLAYTVD--GAPRFSEREITKEDLS 66
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYG 122
+ VG F +NRAGIEGTLHR+S I+S G + G+T RVG+ V G + + LL G
Sbjct: 67 FVLHRVGGFKENNRAGIEGTLHRVSRIQSALGEMTGITIRVGKFVEGVAEPLRPYLLESG 126
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
S+L VG P GKTT++R+I R+L++++ RVV+VDTSNEIGGDG H I ARRMQV
Sbjct: 127 GSLLVVGPPRTGKTTLLRDIVRILAEKWGPRVVVVDTSNEIGGDGLTAHPGIRPARRMQV 186
Query: 183 PEPSL--QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
P+P Q +++ +A+ NH PEV++VDEIG + C + + RGV ++ TAHGE L +
Sbjct: 187 PDPPSRNQGRIIYQAIANHSPEVVVVDEIGYNEDVQECLTASRRGVRVVATAHGERLLDA 246
Query: 241 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTE 299
++NP L ++G D E R R+ P+F +++ + Y V
Sbjct: 247 LENPALHPVLGEPDL-----REGR----------RRTRPSFGTALQVVAKGRYLVYPDLA 291
Query: 300 KSVDMLLRGKTP 311
+++D LL+G+ P
Sbjct: 292 QALDDLLQGREP 303
>gi|348667954|gb|EGZ07779.1| hypothetical protein PHYSODRAFT_529044 [Phytophthora sojae]
Length = 460
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 123/316 (38%), Positives = 175/316 (55%), Gaps = 26/316 (8%)
Query: 22 DSKRGQLLEVILDLGRLP-------EARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGG 74
D+ R +L++V LD+GR+P + L + G + T ++E+ G
Sbjct: 141 DNYRTKLVDVCLDVGRVPYVYTGKKQRVVLSKHGATVAKDT---IDEILSNLGGEMRIGD 197
Query: 75 DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL----HYGKSILFVGR 130
DNRAGI+ LHRIS +RS+ + GLT RVGRA+ ++ DLL H KS+L +G
Sbjct: 198 DNRAGIDRQLHRISVMRSKTDEVYGLTMRVGRALRNAACVLTDLLLSARHADKSVLVLGH 257
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
PG GKTT++R++AR +S E + V I+DTSNEIGGDG +PH +G ARRM V Q
Sbjct: 258 PGSGKTTLIRDVARCVS-ETMENVCIIDTSNEIGGDGLVPHECVGWARRMMVRSLEAQAG 316
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VM+E V+NH E +IVDEIG AE A ++ +RG LI +AHG++ ++KNP L L+
Sbjct: 317 VMVECVQNHTVETLIVDEIGRRAEVLAASTVRQRGPRLIASAHGDF-RALLKNPDLKGLV 375
Query: 251 GGVDTVTLGDEEARARRCQKSI-LERKAPPTFYFLIEM------RERHYWVTHKTEKSVD 303
GG V +GD A + + +R P F ++E+ R R W K+VD
Sbjct: 376 GGSQQVIVGDSAAAQSASKSKLQTQRAGNPIFDVIVELDHVVRGRCRVIW---DVAKAVD 432
Query: 304 MLLRGKTPLVEIRKRD 319
+ G E R+ D
Sbjct: 433 SVFEGNGYAFETRQWD 448
>gi|291294925|ref|YP_003506323.1| AAA ATPase [Meiothermus ruber DSM 1279]
gi|290469884|gb|ADD27303.1| AAA ATPase [Meiothermus ruber DSM 1279]
Length = 318
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 169/297 (56%), Gaps = 22/297 (7%)
Query: 18 RLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNR 77
R++ + R L E++LDLG+ Y L VS ++L Y +G F +NR
Sbjct: 32 RVEVEGHRDSLDEIVLDLGK--PLIYTAADQVYVLEGRTVSKDDLSYLTHRLGGFKENNR 89
Query: 78 AGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTT 137
AG+EGTLHRIS I+ G VG+T R+GR V G + + L S+L VG P GKTT
Sbjct: 90 AGLEGTLHRISRIQDAYGETVGVTIRIGRFVMGVAEALRPWLEQTGSLLVVGPPRTGKTT 149
Query: 138 VMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK--VMIEA 195
++R+I R+L+ + RV +VDTSNEIGGDG + H I ARR+QVP+P +++ V+ +A
Sbjct: 150 LLRDIVRILAGRYGPRVAVVDTSNEIGGDGKLTHPGISPARRLQVPDPPSKNQGWVIYQA 209
Query: 196 VENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDT 255
+ NH PEV++ DEIG + C + + RGV ++ TAHGE + ++++NP+L +
Sbjct: 210 IANHSPEVVVADEIGYNEDVFQCLTASRRGVRVVATAHGETILDLLENPVLLPI------ 263
Query: 256 VTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTP 311
LGD RR + P+F +E+R + +V + +++D LL G P
Sbjct: 264 --LGDPVEGKRRSR---------PSFAMCLEVRGKGKFVLYPDFAEALDTLLAGGEP 309
>gi|159481614|ref|XP_001698873.1| hypothetical protein CHLREDRAFT_151995 [Chlamydomonas reinhardtii]
gi|158273365|gb|EDO99155.1| predicted protein [Chlamydomonas reinhardtii]
Length = 715
Score = 187 bits (476), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/190 (51%), Positives = 134/190 (70%), Gaps = 2/190 (1%)
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
L S+L VGRPG GKTTV+R+IAR+L+D+ +RVV+VDTSNEI GD PH IG+AR
Sbjct: 422 LEAAGSLLLVGRPGSGKTTVLRDIARLLADDLDRRVVVVDTSNEIAGDDPTPHPCIGSAR 481
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
RM VP L +VM+EAV+NH PEV++VDEI +E E A +SIA+RGVML+ T HG L+
Sbjct: 482 RMMVPRRELLWRVMLEAVQNHGPEVLVVDEISSEEEVLAAQSIAQRGVMLVATTHGPSLK 541
Query: 239 NIIKNPILSDLIGGVDTVTLGDEEAR-ARRCQKSILERKAPPTFYFLIEMRERHYWVTHK 297
+++N L+ L+GG++ VT+GD AR + K+ LERK PTF ++E++ + H
Sbjct: 542 ALLRNHTLNPLLGGIEVVTIGDVAARESNSGNKTRLERKDMPTFAAVVEVKPGGRLLVHP 601
Query: 298 -TEKSVDMLL 306
T +SVD+LL
Sbjct: 602 DTAESVDLLL 611
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/39 (58%), Positives = 26/39 (66%)
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSG 110
FG DNR + G+LHRISA+R G I GLT RVGR G
Sbjct: 324 FGTDNRCCVPGSLHRISAMRDTAGRIYGLTYRVGRHTHG 362
>gi|154341757|ref|XP_001566830.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064155|emb|CAM40352.1| conserved hypothetical protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 551
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 120/285 (42%), Positives = 169/285 (59%), Gaps = 11/285 (3%)
Query: 27 QLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHR 86
Q+ E+ + LG+ E R GG ++ + EL+Y +G FG D R + T HR
Sbjct: 141 QVEELFVHLGQDVEVR---GSGGWVIQLPPPTTAELQYLMKHIGRFGADGRGCVANTAHR 197
Query: 87 ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVL 146
S R R G +G+T RVGR V G + L G S+L + + G+GKTT++R++A L
Sbjct: 198 ASVWRGRHGEALGVTLRVGRYVPGAARALLPLARRG-SLLILSKAGMGKTTLLRDLAAGL 256
Query: 147 S-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
+ D RV +VDTSNEIGGDG IP +G RR+QVP Q +VMIE ++NH P+ +I
Sbjct: 257 AQDPLTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVPRREDQSRVMIEVIQNHTPDYLI 316
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARA 265
VDEI TE EA A SI++RGV +IGT HGE LE +++N L+ L+GG L +EE R
Sbjct: 317 VDEIATEEEAEAAWSISQRGVHMIGTCHGEHLEGLLQNRALNLLVGGAAQAFLSNEERRL 376
Query: 266 R-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDMLL 306
R + +K++LER F F++E+ R H +V K+VD+ L
Sbjct: 377 RNKTKKTVLERPYNSPFSFVVELHARNRAHLYV--DVNKAVDLAL 419
>gi|297564982|ref|YP_003683954.1| AAA ATPase [Meiothermus silvanus DSM 9946]
gi|296849431|gb|ADH62446.1| AAA ATPase [Meiothermus silvanus DSM 9946]
Length = 322
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 111/297 (37%), Positives = 169/297 (56%), Gaps = 22/297 (7%)
Query: 18 RLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNR 77
R++ + R L E++LDLG+ Y L V+ ++L Y +G F +NR
Sbjct: 36 RVEVEGHRDSLDEIVLDLGK--PLIYTAGDQVYVLEGRTVTKDDLSYLTHRLGGFKENNR 93
Query: 78 AGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTT 137
AG+EGTLHR+S I+ G VG+T RVGR V G + + L S+L VG P GKTT
Sbjct: 94 AGLEGTLHRVSRIQDAYGETVGVTIRVGRFVLGVAEALRPWLEQTGSLLVVGPPRTGKTT 153
Query: 138 VMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK--VMIEA 195
++R+I R+L+ + RV +VDTSNEIGGDG + H I ARR+QVP+P +++ V+ +A
Sbjct: 154 LLRDIVRILAGRYGPRVAVVDTSNEIGGDGKLTHPGISPARRLQVPDPPSKNQGWVIYQA 213
Query: 196 VENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDT 255
+ NH PEV++ DEIG + C + + RGV ++ TAHGE + ++++NP+L +
Sbjct: 214 IANHSPEVVVADEIGYNEDVFQCLTASRRGVRVVATAHGETILDLLENPVLLPI------ 267
Query: 256 VTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKT-EKSVDMLLRGKTP 311
LGD RR + P+F +E+R + +V + +++D LL G P
Sbjct: 268 --LGDPGEGRRRSR---------PSFAMCLEVRGKGKFVLYPDFAEALDTLLTGGEP 313
>gi|407852006|gb|EKG05683.1| hypothetical protein TCSYLVIO_003242 [Trypanosoma cruzi]
Length = 539
Score = 179 bits (454), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 122/310 (39%), Positives = 175/310 (56%), Gaps = 19/310 (6%)
Query: 30 EVILDLGRLPEARYLGEFGGKYLRS-TEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRIS 88
E L LG+ E R GG+++ SV EL+++ +G+FG D R I T HR+S
Sbjct: 160 EFFLHLGQEMEVR-----GGEWVAQLPPPSVSELQFSIEKIGQFGDDGRGCIRNTPHRVS 214
Query: 89 AIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSD 148
R R G +G+T RVGR V + L H G S+L + + G+GKTT++R++A LS
Sbjct: 215 VWRGRLGEPLGITIRVGRYVPNVARALIPLAHKG-SVLILSKAGIGKTTLLRDLAASLSR 273
Query: 149 EFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
E K RV++VDTSNEIGGD IP +G RR+QV Q ++M + ++NH PE ++VD
Sbjct: 274 EPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRVQVSRREDQGQIMTQILQNHSPEYVVVD 333
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARAR- 266
EI T +EA A S+ +RGV LI T HGE L +++N L+ L+GG L +EE R R
Sbjct: 334 EIATASEAEAAWSMTQRGVHLIATCHGENLHGLLQNQSLNLLVGGAAHAFLSNEERRLRN 393
Query: 267 RCQKSILERKAPPTFYFLIEMRERH-YWVTHKTEKSVDMLLRGKTPLVEIRKRDDRFNVV 325
+ +K+ILER F F++E+ R+ V +VD+LL +D + N
Sbjct: 394 KSKKTILERPHLSPFRFVVELNSRNKAHVYTDVNTAVDLLL---------DDQDAKQNAS 444
Query: 326 VDRWKTYDRH 335
V + DRH
Sbjct: 445 VGQTVVLDRH 454
>gi|342181564|emb|CCC91044.1| conserved hypothetical protein [Trypanosoma congolense IL3000]
Length = 539
Score = 178 bits (451), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 117/283 (41%), Positives = 166/283 (58%), Gaps = 14/283 (4%)
Query: 30 EVILDLGRLPEARYLGEFGGKY-LRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRIS 88
E LG+ E R GG + +++ +V +L Y VG FG D R I T HR++
Sbjct: 161 EFFFHLGQDIEVR-----GGDWVIQAPPPTVGDLRYTLERVGRFGEDGRGCIRNTSHRVA 215
Query: 89 AIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSD 148
R R G +GLT RVGR V + L G S+L V + GVGKTT++R++A LS
Sbjct: 216 VWRGRHGEPLGLTIRVGRYVPNLARAIVPLARRG-SVLIVSKAGVGKTTILRDLAASLSR 274
Query: 149 EFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
E + RV+++DTSNEIGGD + +G RR+QVP Q +VM + ++NH PE +IVD
Sbjct: 275 EPSRPRVMVIDTSNEIGGDSPVALPFLGRCRRVQVPRREAQQEVMRQVLQNHSPEYMIVD 334
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARAR- 266
EI + AEA A SI++RGV LI T HGE L +++N L+ L+GGV L +EE R R
Sbjct: 335 EITSAAEAEAAWSISQRGVHLIATCHGENLAGLLQNRSLNILVGGVAQAFLSNEERRLRN 394
Query: 267 RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSVDMLL 306
+ +K++LER F+F++E+ R H +V ++VD LL
Sbjct: 395 KVKKTVLERPNSSPFHFVVELTSRKCAHLYV--DVNEAVDCLL 435
>gi|71422331|ref|XP_812102.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876843|gb|EAN90251.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 539
Score = 177 bits (449), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 126/331 (38%), Positives = 181/331 (54%), Gaps = 19/331 (5%)
Query: 10 ILPSDLRDRL--QNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQS 67
ILP LR+ + + E + LG+ E R G+ G + SV EL+++
Sbjct: 138 ILPPSLREAIISHPSFSHADVEEFFVHLGQEMEVR--GD--GWVAQLPPPSVSELQFSIE 193
Query: 68 AVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILF 127
+G FG D R I T HR+S R R G +G+T RVGR V + L H G S+L
Sbjct: 194 KIGHFGDDGRGCIRNTPHRVSVWRGRLGEPLGITIRVGRYVPNVARALIPLAHKG-SVLI 252
Query: 128 VGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+ + G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G RR+QV
Sbjct: 253 LSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGRCRRVQVSRRE 312
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
Q ++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE L +++N L
Sbjct: 313 DQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGENLHGLLQNQSL 372
Query: 247 SDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWVTHKTEKSVDM 304
+ L+GG L +EE R R + +K+ILER F F++E+ R+ V +VD+
Sbjct: 373 NLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHVYTDVNTAVDL 432
Query: 305 LLRGKTPLVEIRKRDDRFNVVVDRWKTYDRH 335
LL + D + N V + DRH
Sbjct: 433 LLDDQ---------DAKQNASVGQTVVLDRH 454
>gi|71420679|ref|XP_811568.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70876244|gb|EAN89717.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 539
Score = 177 bits (448), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 162/281 (57%), Gaps = 13/281 (4%)
Query: 58 SVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD 117
SV EL+++ +G FG D R I T HR+S R R G +G+T RVGR V +
Sbjct: 184 SVSELQFSIEKIGHFGDDGRGCIRNTPHRVSVWRGRLGEPLGITIRVGRYVPNVARALIP 243
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGT 176
L H G S+L + + G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G
Sbjct: 244 LAHKG-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGR 302
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
RR+QV Q ++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE
Sbjct: 303 CRRVQVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGEN 362
Query: 237 LENIIKNPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWV 294
L +++N L+ L+GG L +EE R R + +K+ILER F F++E+ R+ V
Sbjct: 363 LHGLLQNQSLNLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHV 422
Query: 295 THKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRH 335
+VD+LL +D + N V + DRH
Sbjct: 423 YTDVNTAVDLLL---------DDQDAKQNASVGQTVVLDRH 454
>gi|407416930|gb|EKF37845.1| hypothetical protein MOQ_001953 [Trypanosoma cruzi marinkellei]
Length = 539
Score = 177 bits (448), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 114/281 (40%), Positives = 162/281 (57%), Gaps = 13/281 (4%)
Query: 58 SVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD 117
SV EL+++ +G FG D R I T HR+S R R G +G+T RVGR V +
Sbjct: 184 SVNELQFSIEKIGRFGDDGRGCIRNTPHRVSVWRGRLGEPLGITIRVGRYVPNVARALIP 243
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK-RVVIVDTSNEIGGDGDIPHSAIGT 176
L H G S+L + + G+GKTT++R++A LS E K RV++VDTSNEIGGD IP +G
Sbjct: 244 LAHKG-SVLILSKAGIGKTTLLRDLAASLSREPSKPRVIVVDTSNEIGGDCPIPLPFLGR 302
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
RR+QV Q ++M + ++NH PE ++VDEI T +EA A S+ +RGV LI T HGE
Sbjct: 303 CRRVQVSRREDQGQIMTQILQNHSPEYVVVDEIATASEAEAAWSMTQRGVHLIATCHGEN 362
Query: 237 LENIIKNPILSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRERH-YWV 294
L +++N L+ L+GG L +EE R R + +K+ILER F F++E+ R+ V
Sbjct: 363 LHGLLQNQSLNLLVGGAAQAFLSNEERRLRNKSKKTILERPHLSPFRFVVELNSRNKAHV 422
Query: 295 THKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTYDRH 335
+VD+LL + D + N V + DRH
Sbjct: 423 YTDVNTAVDLLLDDQ---------DAKQNASVGQTVVLDRH 454
>gi|320450693|ref|YP_004202789.1| AAA ATPase [Thermus scotoductus SA-01]
gi|320150862|gb|ADW22240.1| AAA ATPase [Thermus scotoductus SA-01]
Length = 316
Score = 176 bits (447), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/225 (44%), Positives = 135/225 (60%), Gaps = 4/225 (1%)
Query: 30 EVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISA 89
EV +DL R R GE +YL EVS ++EY + VG F + RAGI GTLHRIS
Sbjct: 43 EVAMDLDRPLVIRRRGE---QYL-YREVSAADIEYFYNKVGSFRPNGRAGIPGTLHRISV 98
Query: 90 IRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDE 149
IR +G T R GRA+ G + + S+L +G PGVGKTT++R I +
Sbjct: 99 IRDSDDLAIGFTIRFGRAIPGIAKPLQKWISGRDSVLIIGPPGVGKTTLLRGIVEEKAKV 158
Query: 150 FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
+ R+VIVDTSNEI GDG +PH IG+ARRM V +P Q ++++A+ NH PE I+VDEI
Sbjct: 159 LKARLVIVDTSNEIAGDGTVPHPIIGSARRMMVGDPRKQASIIMQAITNHSPETIVVDEI 218
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVD 254
G + + RGV ++ T HGE L ++++NP+L L+G D
Sbjct: 219 GYHDDVAVLETARRRGVDIVATVHGEDLIDVLENPVLKPLLGYPD 263
>gi|72390323|ref|XP_845456.1| hypothetical protein [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|62359508|gb|AAX79944.1| hypothetical protein, conserved [Trypanosoma brucei]
gi|70801991|gb|AAZ11897.1| hypothetical protein, conserved [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
Length = 470
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 173/305 (56%), Gaps = 16/305 (5%)
Query: 10 ILPSDLRDRL--QNDSKRGQLLEVILDLGRLPEARYLGEFGGKY-LRSTEVSVEELEYAQ 66
+L LR + Q K+ ++ E L LG+ E R G + ++ SV +L Y
Sbjct: 77 LLTPSLRSHIVSQPSYKQTEVEEFFLHLGQDIEVR-----GADWVIQVPPPSVTDLRYTL 131
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FG D R I T HR++ R R G +GLT RVGR V + L G S+L
Sbjct: 132 ERVGRFGDDGRGCIGHTPHRVAVWRGRLGEPLGLTIRVGRYVPNVARALVPLARRG-SVL 190
Query: 127 FVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
+ + G+GKTT++R++A LS D + RV++VDTSNEIGGD +P +G RR+QVP
Sbjct: 191 ILSKAGMGKTTILRDLAASLSRDPAKPRVMVVDTSNEIGGDSPMPLPFLGRCRRIQVPRR 250
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
Q +VM + ++NH PE +IVDE+ T AEA SI++RGV L+ T HGE L +++N
Sbjct: 251 EEQQEVMKQILQNHSPEYVIVDEVSTTAEAEVTWSISQRGVHLVATCHGESLAGLLQNQS 310
Query: 246 LSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKS 301
L+ L+GG L +EE R R + +K+ILER F F++E+ R H +V ++
Sbjct: 311 LNLLVGGTAHAFLSNEERRLRNKIKKTILERPHSSPFKFVVELHSRKFAHLYV--DVNQA 368
Query: 302 VDMLL 306
VD LL
Sbjct: 369 VDCLL 373
>gi|261328858|emb|CBH11836.1| hypothetical protein, conserved [Trypanosoma brucei gambiense
DAL972]
Length = 531
Score = 175 bits (443), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 121/305 (39%), Positives = 173/305 (56%), Gaps = 16/305 (5%)
Query: 10 ILPSDLRDRL--QNDSKRGQLLEVILDLGRLPEARYLGEFGGKY-LRSTEVSVEELEYAQ 66
+L LR + Q K+ ++ E L LG+ E R G + ++ SV +L Y
Sbjct: 138 LLTPSLRSHIVSQPSYKQTEVEEFFLHLGQDIEVR-----GADWVIQVPPPSVTDLRYTL 192
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
VG FG D R I T HR++ R R G +GLT RVGR V + L G S+L
Sbjct: 193 ERVGRFGDDGRGCIGHTPHRVAVWRGRLGEPLGLTIRVGRYVPNVARALVPLARRG-SVL 251
Query: 127 FVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
+ + G+GKTT++R++A LS D + RV++VDTSNEIGGD +P +G RR+QVP
Sbjct: 252 ILSKAGMGKTTILRDLAASLSRDPAKPRVMVVDTSNEIGGDSPMPLPFLGRCRRIQVPRR 311
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
Q +VM + ++NH PE +IVDE+ T AEA SI++RGV L+ T HGE L +++N
Sbjct: 312 EEQQEVMKQILQNHSPEYVIVDEVSTTAEAEVTWSISQRGVHLVATCHGESLAGLLQNQS 371
Query: 246 LSDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKS 301
L+ L+GG L +EE R R + +K+ILER F F++E+ R H +V ++
Sbjct: 372 LNLLVGGTAHAFLSNEERRLRNKIKKTILERPHSSPFKFVVELHSRKFAHLYV--DVNQA 429
Query: 302 VDMLL 306
VD LL
Sbjct: 430 VDCLL 434
>gi|398019514|ref|XP_003862921.1| hypothetical protein, conserved [Leishmania donovani]
gi|322501152|emb|CBZ36230.1| hypothetical protein, conserved [Leishmania donovani]
Length = 551
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 177/304 (58%), Gaps = 13/304 (4%)
Query: 10 ILPSDLRDRLQNDSK--RGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQS 67
+LP+ LR + ++ E+ + LG+ E R GG ++ + +L+Y
Sbjct: 122 LLPATLRTAITQHPSFDYTEVEELFVHLGQDVEVR---GSGGWVIQLPPPTTADLQYLVK 178
Query: 68 AVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILF 127
+G FG D R + T HR SA R R G +G+T RVGR V G + L G S+L
Sbjct: 179 HIGRFGADGRGCVANTAHRASAWRGRFGEALGVTLRVGRYVPGAARALLPLAQRG-SLLI 237
Query: 128 VGRPGVGKTTVMREIARVLSDEF-QKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+ + G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV
Sbjct: 238 LSKAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARRE 297
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
Q +VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++N L
Sbjct: 298 DQGRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRAL 357
Query: 247 SDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSV 302
+ L+GG L +EE R R + +K++LER F FL+E+ R H +V K+V
Sbjct: 358 NLLVGGAAQAFLSNEERRLRNKTKKTVLERPYSSPFSFLVELHARNRGHLYV--DVNKAV 415
Query: 303 DMLL 306
D++L
Sbjct: 416 DLVL 419
>gi|339898849|ref|XP_001467056.2| conserved hypothetical protein [Leishmania infantum JPCM5]
gi|321398540|emb|CAM70107.2| conserved hypothetical protein [Leishmania infantum JPCM5]
Length = 551
Score = 173 bits (439), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 124/304 (40%), Positives = 177/304 (58%), Gaps = 13/304 (4%)
Query: 10 ILPSDLRDRLQNDSK--RGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQS 67
+LP+ LR + ++ E+ + LG+ E R GG ++ + +L+Y
Sbjct: 122 LLPATLRTAITQHPSFDYTEVEELFVHLGQDVEVR---GSGGWVIQLPPPTTADLQYLVK 178
Query: 68 AVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILF 127
+G FG D R + T HR SA R R G +G+T RVGR V G + L G S+L
Sbjct: 179 HIGRFGADGRGCVANTAHRASAWRGRFGEALGVTLRVGRYVPGAARALLPLAQRG-SLLI 237
Query: 128 VGRPGVGKTTVMREIARVLSDEF-QKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+ + G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV
Sbjct: 238 LSKAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARRE 297
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
Q +VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++N L
Sbjct: 298 DQGRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRAL 357
Query: 247 SDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSV 302
+ L+GG L +EE R R + +K++LER F FL+E+ R H +V K+V
Sbjct: 358 NLLVGGAAQAFLSNEERRLRNKTKKTVLERPYSSPFSFLVELHARNRGHLYV--DVNKAV 415
Query: 303 DMLL 306
D++L
Sbjct: 416 DLVL 419
>gi|157872545|ref|XP_001684813.1| conserved hypothetical protein [Leishmania major strain Friedlin]
gi|68127883|emb|CAJ06408.1| conserved hypothetical protein [Leishmania major strain Friedlin]
Length = 551
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 178/304 (58%), Gaps = 13/304 (4%)
Query: 10 ILPSDLRDRLQNDSK--RGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQS 67
+LP+ LR + S ++ E+ + LG+ E R GG ++ + +L+Y
Sbjct: 122 LLPATLRTAITQHSSFDYTEVEELFVHLGQDVEVR---GSGGWVIQLPPPTTADLQYLVK 178
Query: 68 AVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILF 127
+G FG D R + T HR S R R G +G+T RVGR V G + L G S+L
Sbjct: 179 HIGRFGADGRGCVANTAHRASVWRGRHGEALGVTLRVGRYVPGAARALLPLAQRG-SLLI 237
Query: 128 VGRPGVGKTTVMREIARVLSDEF-QKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+ + G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV +
Sbjct: 238 LSKAGMGKTTLLRDLAAALAQEPGTPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVAQRQ 297
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
Q +VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++N L
Sbjct: 298 DQGRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRAL 357
Query: 247 SDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSV 302
+ L+GG L +EE R R + +K++LER F F++E+ R H +V K+V
Sbjct: 358 NLLVGGAAQAFLSNEERRLRNKMKKTVLERPYSSPFSFVVELHARNLGHLYV--DVNKAV 415
Query: 303 DMLL 306
D++L
Sbjct: 416 DLVL 419
>gi|297567949|ref|YP_003686919.1| AAA ATPase [Meiothermus silvanus DSM 9946]
gi|296852398|gb|ADH65411.1| AAA ATPase [Meiothermus silvanus DSM 9946]
Length = 386
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 109/299 (36%), Positives = 158/299 (52%), Gaps = 32/299 (10%)
Query: 28 LLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGE-----FGGDNRAGIEG 82
L E+ LD+GR+P Y S S +L Q+ + F D R GI G
Sbjct: 29 LEEIALDIGRIPH--YWCGAPPPLAGSQPFSEADLANIQAKLSSRYQVSFREDGRVGIGG 86
Query: 83 TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREI 142
TLHRISAI+ R ++ GLT R+ R V G D V L +L +G PGVGKTT +R++
Sbjct: 87 TLHRISAIKDRYKSLAGLTIRLARVVEGVADPVMPYLLQADGVLIIGPPGVGKTTFLRDV 146
Query: 143 ARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS---------LQHKVMI 193
R + + +VV+VDTSNEIGG+G +PH +G+ARR+QVP P+ + + +
Sbjct: 147 VRQYAQQIGPKVVVVDTSNEIGGEGLVPHPTLGSARRLQVPTPNYAIGETFQMMLARTYL 206
Query: 194 EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGV 253
EA+ NH P+VI+ DE+G + +I +RG+ I T HG L ++++NP+L LIG
Sbjct: 207 EALANHGPQVIVGDEVGYPEDVAVVETIGKRGIKGIVTVHGRTLRDVLENPVLWPLIGRP 266
Query: 254 DTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGKTP 311
D ARR R+ P F +E+R + + V ++D LL+G P
Sbjct: 267 DL--------PARR-------RQGRPVFSMALEVRGKGRFAVYPDLAGAIDTLLQGGQP 310
>gi|224030195|gb|ACN34173.1| unknown [Zea mays]
Length = 442
Score = 171 bits (434), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/143 (58%), Positives = 108/143 (75%), Gaps = 1/143 (0%)
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
MQVP+ ++QH VMIEAVENHMPEVI++DEIGTE EA A +IA+RGV L+GTAHG +E+
Sbjct: 1 MQVPKVTMQHNVMIEAVENHMPEVIVIDEIGTELEAMAATTIAQRGVQLVGTAHGVTIES 60
Query: 240 IIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM-RERHYWVTHKT 298
IIKNP L L+GG+++VTLGDEEA+ R+ QK+ILERK PPTF +EM + V H+
Sbjct: 61 IIKNPCLQMLVGGIESVTLGDEEAKKRKVQKTILERKGPPTFLCAVEMISKTECRVHHRL 120
Query: 299 EKSVDMLLRGKTPLVEIRKRDDR 321
+ +VD +L GK P E RK ++
Sbjct: 121 DATVDAILAGKPPKFEARKMHNK 143
>gi|401425735|ref|XP_003877352.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322493597|emb|CBZ28886.1| conserved hypothetical protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 550
Score = 169 bits (429), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 123/304 (40%), Positives = 175/304 (57%), Gaps = 13/304 (4%)
Query: 10 ILPSDLRDRLQNDSK--RGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQS 67
+LP+ LR + + E+ + LG+ E R GG ++ + +LEY
Sbjct: 122 LLPATLRTAITQHPSFDYTDVEELFVHLGQDVEVR---GSGGWVIQLQPPTTADLEYLVK 178
Query: 68 AVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILF 127
+G FG D R + T HR S R R G +G+T RVGR V G + L G S+L
Sbjct: 179 HIGRFGADGRGCVANTAHRASVWRGRHGEALGVTLRVGRYVPGAARALLPLAQRG-SLLI 237
Query: 128 VGRPGVGKTTVMREIARVLSDEF-QKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+ + G+GKTT++R++A L+ E RV +VDTSNEIGGDG IP +G RR+QV
Sbjct: 238 LSKAGMGKTTLLRDLAAALAQEPGAPRVTVVDTSNEIGGDGPIPLPYLGRCRRIQVARRE 297
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
Q +VM+E ++NH PE +IVDEI TE EA A SI++RGV LIGT HGE LE +++N L
Sbjct: 298 DQGRVMMEVIQNHTPEYLIVDEIATEEEAEAAWSISQRGVHLIGTCHGEHLEGLLQNRAL 357
Query: 247 SDLIGGVDTVTLGDEEARAR-RCQKSILERKAPPTFYFLIEMRER---HYWVTHKTEKSV 302
+ L+GG L +EE R R + +K++LER F F++E+ R H +V K+V
Sbjct: 358 NLLVGGAAQAFLSNEERRLRNKTRKTVLERPYSSPFSFVVELHGRSRGHLYV--DVNKAV 415
Query: 303 DMLL 306
D++L
Sbjct: 416 DLVL 419
>gi|159466478|ref|XP_001691436.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279408|gb|EDP05169.1| predicted protein [Chlamydomonas reinhardtii]
Length = 382
Score = 165 bits (417), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 86/175 (49%), Positives = 118/175 (67%), Gaps = 1/175 (0%)
Query: 117 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 176
D G S+L +GRPG GKTT++R+IAR L+D+ VV+VDTSNEI G +PHS IG+
Sbjct: 206 DRFTTGGSLLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDTVPHSCIGS 265
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
ARR++V VM+EAV+NH P+V++VDE+G+ EA A RSI++RGVML+ TAHG
Sbjct: 266 ARRLKVGRRDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTD 325
Query: 237 LENIIKNPILSDLIGGVDTVTL-GDEEARARRCQKSILERKAPPTFYFLIEMRER 290
L +I+ NP L+ L+GG+ TV L A K+ ER+ PTF L+E++ R
Sbjct: 326 LRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTRTERRGEPTFRCLVEVQGR 380
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 214 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL-GDEEARARRCQKSI 272
EA A RSI++RGVML+ TAHG L +I+ NP L+ L+GG+ TV L A K+
Sbjct: 63 EAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTR 122
Query: 273 LERKAPPTFYFLIEMRERHYWVTHKTEK 300
ER+ PTF L+E++ R ++ K
Sbjct: 123 TERRGEPTFRCLVEVQGRGMFLFFDNSK 150
>gi|159466496|ref|XP_001691445.1| hypothetical protein CHLREDRAFT_145023 [Chlamydomonas reinhardtii]
gi|158279417|gb|EDP05178.1| predicted protein [Chlamydomonas reinhardtii]
Length = 415
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 83/165 (50%), Positives = 115/165 (69%), Gaps = 1/165 (0%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
S+L +GRPG GKTT++R+IAR L+D+ VV+VDTSNEI G +PHS IG+ARR++V
Sbjct: 209 SLLLLGRPGAGKTTLLRDIARFLADDLGLSVVVVDTSNEIAGGDAVPHSCIGSARRLKVG 268
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
VM+EAV+NH P+V++VDE+G+ EA A RSI++RGVML+ TAHG L +I+ N
Sbjct: 269 RRDQLQAVMLEAVQNHGPQVVVVDELGSRQEAEAARSISQRGVMLVATAHGTDLRSIMGN 328
Query: 244 PILSDLIGGVDTVTL-GDEEARARRCQKSILERKAPPTFYFLIEM 287
P L+ L+GG+ TV L A+ K+ ER+ PTF L+E+
Sbjct: 329 PDLNSLVGGMQTVILGDAAAGAAQGGAKTRTERRGEPTFRCLVEV 373
>gi|326516068|dbj|BAJ88057.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 160
Score = 160 bits (405), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 79/135 (58%), Positives = 99/135 (73%)
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ +FGGDNRAGI TLH ISAI +R+ IVGLTCRVGRAV G +++ DL+ G S+L
Sbjct: 1 CCLPDFGGDNRAGISRTLHWISAISNRQADIVGLTCRVGRAVPGSANLLQDLVKAGGSLL 60
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPS 186
+G GV KT V+REIAR+L+D++ KRV+IVDTSNEI GDGDIPH IG ARR+QVP+
Sbjct: 61 LIGPLGVWKTIVIREIARMLADDYDKRVMIVDTSNEIAGDGDIPHPGIGNARRLQVPDQE 120
Query: 187 LQHKVMIEAVENHMP 201
+QHKV +P
Sbjct: 121 MQHKVCSIEFNTLLP 135
>gi|260804927|ref|XP_002597339.1| hypothetical protein BRAFLDRAFT_66476 [Branchiostoma floridae]
gi|229282602|gb|EEN53351.1| hypothetical protein BRAFLDRAFT_66476 [Branchiostoma floridae]
Length = 2613
Score = 154 bits (389), Expect = 6e-35, Method: Compositional matrix adjust.
Identities = 102/294 (34%), Positives = 151/294 (51%), Gaps = 30/294 (10%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGK-----------YLRST 55
F +LP +D L + L+EV +D+GR+P AR + K L +T
Sbjct: 2274 FTSLLPM-FKDNL--SPIQDNLVEVEIDIGRIPVARLDFHYQNKSSLYYNPDSPCLLATT 2330
Query: 56 EVSVEELEYAQSAVGEFG--------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRA 107
+S + L FG G R ++GTLH IS +++ G +VGLT R G+A
Sbjct: 2331 RLSDQTLTRETLETILFGLPLERSAIGQGRVLLKGTLHWISTLKNSSGEVVGLTLRRGQA 2390
Query: 108 VSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 167
V G +D+++D++ G S L +G P G+TT++RE ARVLSD +RV++VDT EI G
Sbjct: 2391 VPGCLDLLWDVVTSGTSTLIMGCPCSGRTTLLREWARVLSDVCYRRVIVVDTLKEIAGGD 2450
Query: 168 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 227
DIPH IG ARR+QV Q + A NH P+ IIVDE+ T+ E A ++I G+
Sbjct: 2451 DIPHPGIGGARRVQVHNRCDQVSQLQTAARNHSPDCIIVDEVQTQEEVTALQAIRLTGIQ 2510
Query: 228 LIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTF 281
++ L ++++N ++ L+G DT + Q PPTF
Sbjct: 2511 VVAGVCAGCLTDLLQNSVMRGLLGLSDTASTFP--------QTPSTSESVPPTF 2556
Score = 136 bits (342), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 97/148 (65%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGV 133
G R + GTLH +S +++ G +VGLT R G+AV G +D+++D++ G S L +GRP
Sbjct: 1504 GQGRVLLRGTLHWVSTLKNSLGEVVGLTLRRGQAVPGCLDLLWDVVTSGTSTLIMGRPCS 1563
Query: 134 GKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMI 193
GKTT++RE ARVLSD +RV++VDT NEI G DIPH IG ARR+QV Q +
Sbjct: 1564 GKTTLLREWARVLSDVCYRRVIVVDTRNEIAGGDDIPHPGIGGARRVQVHNRCDQVFQLQ 1623
Query: 194 EAVENHMPEVIIVDEIGTEAEAHACRSI 221
A NH P+ IIVDE+ T+ E A ++I
Sbjct: 1624 TAARNHSPDCIIVDEVQTQEEVTALQAI 1651
>gi|260804935|ref|XP_002597343.1| hypothetical protein BRAFLDRAFT_66479 [Branchiostoma floridae]
gi|229282606|gb|EEN53355.1| hypothetical protein BRAFLDRAFT_66479 [Branchiostoma floridae]
Length = 3045
Score = 151 bits (382), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 109/333 (32%), Positives = 163/333 (48%), Gaps = 25/333 (7%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGK-----------YLRST 55
F +LP +D L + L+EV +D+GR+P AR + K L +T
Sbjct: 2707 FTSLLPM-FKDNLS--PIQDNLVEVEIDIGRIPVARLDFHYQNKSSLYYNPDSPCLLATT 2763
Query: 56 EVSVEELEYAQSAVGEFG--------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRA 107
+S + L FG G R ++GTLH IS +++ G +VGLT R G+A
Sbjct: 2764 RLSDQTLTRETLETILFGLPLERSAIGQGRVLLKGTLHWISTLKNSLGEVVGLTLRRGQA 2823
Query: 108 VSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 167
V G +D+++D++ G S L +GRP GKTT++RE ARVLSD +RV++VDT EI G
Sbjct: 2824 VPGCLDLLWDVVTSGTSTLIIGRPCSGKTTLLREWARVLSDVCYRRVIVVDTLKEIAGGD 2883
Query: 168 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 227
DI H IG ARR+QV Q + A NH P+ IIVDE+ T+ E A ++I G+
Sbjct: 2884 DITHPGIGGARRVQVHNRCDQVFQLQTAARNHSPDFIIVDEVQTQEEVTALQAIRLTGIQ 2943
Query: 228 LIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 287
++ L +++ N ++ L+G D + + + P F + +
Sbjct: 2944 VVAGVCAGCLPDLLHNSVMRGLLGLSDPASTFPQTPSTSESVPPAFPQTL-PVFQAAVVI 3002
Query: 288 RERHYWVTHKTEKSV--DMLLRGKTPLVEIRKR 318
R + S LL G+ PL + RKR
Sbjct: 3003 HSRDMVSVYSDVASFVRVSLLEGRFPLAQQRKR 3035
>gi|313667305|ref|YP_004049706.1| AAA ATPase central domain protein [Oceanithermus profundus DSM
14977]
gi|313153936|gb|ADR37786.1| AAA ATPase central domain protein [Oceanithermus profundus DSM
14977]
Length = 345
Score = 144 bits (364), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 104/287 (36%), Positives = 151/287 (52%), Gaps = 13/287 (4%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYA 65
A Q LP+ R + L E L +GR P G++ +++ ++ + E
Sbjct: 12 ALIQRLPAKFRRPFREHP---DLSEATLQIGR-PLTVSWGDWERRFVEYEDL-IPAREDI 66
Query: 66 QSAVGEFGG---DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI--DMVYDLLH 120
Q +F G D RAGI+GT HR+SAI R IVG T RV R G + + +LL
Sbjct: 67 QRIAQQFAGIKDDGRAGIDGTAHRVSAIFDRMNNIVGFTVRVARHFPGALPESLKLELLR 126
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 180
S+L VG PG GKTT++R +A +D + I+DTSNEIGG G+ P + AR
Sbjct: 127 SKGSVLIVGAPGSGKTTLLRAVAAAFADAIGPHLNIIDTSNEIGGVGETPIHELRHARWH 186
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
QVP P+ Q +V+ A+ NH P V+I+DE+G + + A RGV +I T HG + ++
Sbjct: 187 QVPNPAKQPEVIRRAIANHGPLVLILDEVGYHGDVPEVEAAARRGVQVIATVHGYGIFDV 246
Query: 241 IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEM 287
I+N S L+G D L AR +S+LE +A FY+L ++
Sbjct: 247 IENAHYSPLLGHPD---LNSRVRLARPAFQSLLEVRAKGKFYWLPDL 290
>gi|298714683|emb|CBJ27608.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 354
Score = 142 bits (357), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 99/261 (37%), Positives = 146/261 (55%), Gaps = 29/261 (11%)
Query: 69 VGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL--HY----- 121
+G FG DN AG +G LHR+ +R + G I G+T RVGR G DMV DLL H+
Sbjct: 44 LGLFGRDNMAGFDGLLHRVGVMRDKGGKIYGVTIRVGRYAKGMADMVDDLLFNHHTATGS 103
Query: 122 GK-------SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS-A 173
GK SIL +GR G GKTT++R++ R LS + VVIVDT ++IGG G +PH A
Sbjct: 104 GKRASQAPASILVLGRHGAGKTTLVRDMCRKLSS--HETVVIVDTRSDIGGAGVVPHRRA 161
Query: 174 IGT-ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
IG +RR+ VP+ QH+V+++A NH P+ I+VDEI ++ + AC ++ RG+ ++ A
Sbjct: 162 IGEESRRVMVPQGMQQHEVILQAYRNHSPQTIVVDEISSQLDIEACMAVKARGIRVVAGA 221
Query: 233 HGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKA-PPTFYFLIEMRER- 290
G+ L ++ +P + +GG++ + A +ER+A P F ++E+ R
Sbjct: 222 VGD-LPYVLDSPEIGAALGGLEDIQ---RSANVDDDSDDQMERRAGSPVFEAVVELEGRA 277
Query: 291 -----HYWVTHKTEKSVDMLL 306
V E VD LL
Sbjct: 278 GGAAPQGAVVTNVEAVVDELL 298
>gi|397565678|gb|EJK44725.1| hypothetical protein THAOC_36714 [Thalassiosira oceanica]
Length = 579
Score = 138 bits (348), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 96/306 (31%), Positives = 154/306 (50%), Gaps = 71/306 (23%)
Query: 27 QLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVE----ELEYAQSAVGEFGGDNRAGIEG 82
+++++ LDLGR P Y G+ + + +V+ ++ + + +FG DNRAGI+G
Sbjct: 317 RVIDISLDLGRRP---YCWHNRGRAFLADDPAVKVQGFHIDAITAKLQDFGNDNRAGIDG 373
Query: 83 TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREI 142
LHRISAIR+ I+GLT R+GR + G+ DMV D++ G +V+
Sbjct: 374 QLHRISAIRNNSKNIIGLTVRIGRHIEGNADMVCDIID-------------GNKSVL--- 417
Query: 143 ARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPE 202
+L + K Q +VMIE V+NH P
Sbjct: 418 --LLGESLSK-----------------------------------QSEVMIECVQNHTPS 440
Query: 203 VIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEE 262
V+++DEIG E A ++ RGV +I +AHG+ L +++KN + LIGG++T TLGD E
Sbjct: 441 VMVIDEIGRRNEVEAAQTSKNRGVRMIASAHGD-LRSLLKNKEIRGLIGGLETTTLGDVE 499
Query: 263 AR-------ARRCQKSILERKAPPTFYFLIEM---RERHYWVTHKTEKSVDMLLRGKTPL 312
A+ ++ +K++ R A P F +IE+ R + + + K+VD +LRG+
Sbjct: 500 AKELQKKTGSKTLEKTLTTRAAAPIFEVIIELKRGRLNEWHIVSDSTKAVDAILRGEKYH 559
Query: 313 VEIRKR 318
V+ R R
Sbjct: 560 VQKRMR 565
>gi|158421474|ref|YP_001527701.1| AAA ATPase [Deinococcus geothermalis DSM 11300]
gi|158342717|gb|ABW35003.1| AAA ATPase [Deinococcus geothermalis DSM 11300]
Length = 322
Score = 137 bits (345), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 99/310 (31%), Positives = 162/310 (52%), Gaps = 20/310 (6%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLE-VILDLGRLPEARYLGEFGGKYLRSTEVSVEEL 62
+ A +LP D+R ++ R L+E + LD G+ + + G +Y R ++ E++
Sbjct: 12 YEAVLDLLPGDVRQLVE---PRIHLVEEIALDQGQNLKVKMDG-LRLEYRRL--ITREDM 65
Query: 63 EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG 122
Y + G+F D R G+ GTLHRISA +G I +T RV RA+ G + + +
Sbjct: 66 IYLTARAGKFREDGRRGLPGTLHRISADFDEEGIIDKVTVRVARAIEGVAEPLRAFVEQA 125
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+ I +G P VGKTT++R+I R+ ++ +V++D+SNEI GDGD+PH + RR +V
Sbjct: 126 RGIAVIGPPAVGKTTLLRDITRIRAEVKSSGLVVIDSSNEITGDGDVPHPMLSRVRRFKV 185
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+P Q + A+ NH PE I++DE+G + S GV +I T HG ++++++
Sbjct: 186 GDPEQQAPKLRRAIRNHGPEEILMDEVGYNGDVPLLVSAVRLGVTVIATMHGRVVKDVLR 245
Query: 243 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSV 302
NP L L+G G+ RA C F IE+ + ++ H+ ++V
Sbjct: 246 NPPLLPLLGVAIDERTGELIKRADTC------------FGMAIEVHGKGKYLVHEDLEAV 293
Query: 303 -DMLLRGKTP 311
LL G+ P
Sbjct: 294 TQALLCGEEP 303
>gi|260804937|ref|XP_002597344.1| hypothetical protein BRAFLDRAFT_66480 [Branchiostoma floridae]
gi|229282607|gb|EEN53356.1| hypothetical protein BRAFLDRAFT_66480 [Branchiostoma floridae]
Length = 1910
Score = 134 bits (337), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 86/261 (32%), Positives = 135/261 (51%), Gaps = 33/261 (12%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
F + + +L L N L+EV +D+GR+P AR+ + L +T +S + L
Sbjct: 1608 FTSLLPMFKDNLSPILDN------LVEVEMDIGRIPVARFYNPETPRMLAATRLSDQALT 1661
Query: 64 YAQSAVGEFG--------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMV 115
FG G R + GTLH IS +++ G +VGLT R G+AV G +D++
Sbjct: 1662 RETLETILFGLPLERSTIGQGRVLLRGTLHWISTLKNSLGEVVGLTLRRGQAVPGCLDLL 1721
Query: 116 YDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
+D++ G S L +GRP GKTT++RE ARVLSD +RV++VDT NE+ H+
Sbjct: 1722 WDVVTSGTSTLIMGRPCSGKTTLLREWARVLSDVCYRRVIVVDTRNEV-------HNRCD 1774
Query: 176 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
++Q A NH P+ IIVDE+ T+ E A ++I G+ ++
Sbjct: 1775 QVSQLQT------------AARNHSPDCIIVDEVQTQEEVTALQAIRLTGIQVVAGVCAG 1822
Query: 236 WLENIIKNPILSDLIGGVDTV 256
L ++++N ++ L+G D V
Sbjct: 1823 CLTDLLQNSVMRGLLGLSDPV 1843
>gi|325284450|ref|YP_004256990.1| AAA ATPase [Deinococcus proteolyticus MRP]
gi|324316514|gb|ADY27627.1| AAA ATPase [Deinococcus proteolyticus MRP]
Length = 316
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 92/289 (31%), Positives = 139/289 (48%), Gaps = 27/289 (9%)
Query: 30 EVILDLGRLPEARYLGEFGGKY---LRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHR 86
E+I+D G+ P A L + Y L++ E + G + D R GI GTLHR
Sbjct: 37 EIIMDRGQ-PLALRLSDLRVTYPYLLKNNEFDRIDQHMQSGVAGGWRKDGRIGIPGTLHR 95
Query: 87 ISAIRSRKGAIVGLTCRVGRAVSGHID----MVYDLLHYGKSILFVGRPGVGKTTVMREI 142
+S + G LT RVGRA+ G + ++ + I VG P VGKTT++R+I
Sbjct: 96 LSREVNTAGITTKLTVRVGRALIGVAEPLRPVIVRAVQENSGIAIVGPPAVGKTTLLRDI 155
Query: 143 ARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPE 202
AR++++ + +VI+DTSNEI GD DIPH IG AR + V P Q + + N P+
Sbjct: 156 ARIMAERLAQGLVIIDTSNEIAGDSDIPHRIIGKARVVAVGNPLHQGEKFARVIGNMGPQ 215
Query: 203 VIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTLGDEE 262
++ DEIG + R A RGV + T HG+ + ++ + L L+G +
Sbjct: 216 ALLSDEIGYRDDIPIIRQNAPRGVSITATLHGKNMVRVVNSENLWPLLGVIGR------- 268
Query: 263 ARARRCQKSILERKAPPTFYFLIEMRER-HYWVTHKTEKSVDMLLRGKT 310
++ P F IE+ R Y V + S++ +L GK
Sbjct: 269 -----------QKVEPSVFAQAIEVIGRGRYRVHEDFDASIEAILAGKN 306
>gi|323452315|gb|EGB08189.1| hypothetical protein AURANDRAFT_71632 [Aureococcus anophagefferens]
Length = 1677
Score = 124 bits (310), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 97/294 (32%), Positives = 149/294 (50%), Gaps = 38/294 (12%)
Query: 26 GQLLEVILDLGRLPEARYLGE------FGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAG 79
G L++V L GR P ++ G GG L ++ E+L A + + RA
Sbjct: 497 GALVDVKLAAGRPPRLQFGGANPAVVTVGGAPL----LTAEDLARACAPLTFDAATERAA 552
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+ G LHR+S + R GA+ L+ RVGR V+G + D+L G+S+LF+G PG GK+T +
Sbjct: 553 LPGQLHRVSRVLHR-GAVAALSLRVGRHVAGAAHRLSDVLRRGESVLFLGAPGAGKSTAL 611
Query: 140 REIARVLSDEFQKR------VVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMI 193
R+ A L +++R +VD S E+GGDG H+++ A R +L H+ M+
Sbjct: 612 RDAA-ALVGAYRERHAPVGDCWVVDQSLELGGDGLAAHASLRPAERYPCQGEAL-HEAML 669
Query: 194 EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-----------LENIIK 242
+ NH P I+VDE+ A A A + +RGV L+ +AH W L ++
Sbjct: 670 RVLRNHTPAAIVVDELVDRAAALAAADVGKRGVQLLASAHA-WEKGATSAHARSLAELVD 728
Query: 243 NPILSDLIGGVDTVTLGDEEARARRCQKSILERKA------PPTFYFLIEMRER 290
+ L+ ++G + VTL D EA ARR + RK TF ++E+R R
Sbjct: 729 DAALAPVLGDFEIVTLSDREA-ARRAKTQRDPRKVRRQRVRNATFGCVVELRPR 781
>gi|386854327|ref|YP_006258707.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|380002656|gb|AFD27843.1| AAA ATPase [Deinococcus gobiensis I-0]
Length = 314
Score = 118 bits (295), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 97/322 (30%), Positives = 153/322 (47%), Gaps = 29/322 (9%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKY-LRSTEVSVEEL 62
+ A + LP ++R +++D L E+I+D L R L + Y L + + + +
Sbjct: 11 YAAILERLPEEIRAIVKDDLP--LLDEIIIDRYSLLSVR-LADMRITYPLHIDDRTFDRI 67
Query: 63 E--YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI----DMVY 116
+ Q G + D R GI TLHR+S + +T RVGRA+ G D++Y
Sbjct: 68 DALMQQDVPGGWRKDGRIGIPSTLHRLSRETNVSQLTSMITVRVGRALMGVAEPLRDVLY 127
Query: 117 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 176
D + I +G P GKTT++R+IAR+L++ +VI+DTSNEI GD D H +G
Sbjct: 128 DAVTNEYGIAIIGPPAAGKTTLLRDIARILAERLGSGLVIIDTSNEIAGDSDHKHPIVGQ 187
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
ARR+ V P Q + A+ N P+ ++ DEIG + A RGV + T HG+
Sbjct: 188 ARRVPVGNPLWQGEKFARAIGNMGPKALLSDEIGYRDDIPVIAMNAPRGVSVTATLHGKN 247
Query: 237 LENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTH 296
+ + + L ++G D V + P F IE+ R ++ H
Sbjct: 248 MRRVAHSQNLWPILGIKDGV------------------KTEPAVFKIAIEVPRRGFFRVH 289
Query: 297 KT-EKSVDMLLRGKTPLVEIRK 317
+ + S+ LL G+ P IR+
Sbjct: 290 EDFDASLKSLLAGEEPTEGIRE 311
>gi|308805324|ref|XP_003079974.1| sporulation protein-related (ISS) [Ostreococcus tauri]
gi|116058431|emb|CAL53620.1| sporulation protein-related (ISS), partial [Ostreococcus tauri]
Length = 173
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 49/85 (57%), Positives = 59/85 (69%)
Query: 249 LIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVTHKTEKSVDMLLRG 308
L+GGV TVTLGD+EARAR CQKSILER+ PPTF LIEM ER WV H +SVD +L G
Sbjct: 2 LVGGVQTVTLGDDEARARGCQKSILERQGPPTFPILIEMHERDMWVAHNVAESVDEVLSG 61
Query: 309 KTPLVEIRKRDDRFNVVVDRWKTYD 333
P+V++R R+ + N V YD
Sbjct: 62 ARPVVQLRTRNAQTNEVSVHRTVYD 86
>gi|105672147|gb|ABF74689.1| AAA [Lingulodinium polyedrum]
Length = 656
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/231 (35%), Positives = 126/231 (54%), Gaps = 13/231 (5%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRS-TEVSVEELEYAQSAV 69
LPS LR Q L +LD+GR P+ L +LR+ +V V E + +++
Sbjct: 333 LPSHLRQDFSGSVHLCQQL--VLDVGRRPQ--VLAGRRRAFLRADPDVVVSEADLSETMR 388
Query: 70 GEFGGDNRA---GIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG-KSI 125
D R+ + TL+R S + G + GLT VG AV G M+ DLL S
Sbjct: 389 RLRLADGRSRLVPVGTTLNRASTLHDESGGLCGLTLHVGCAVLGAAGMIGDLLAADLGSW 448
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
L +G G GKTTV R++AR+L++E + V++VDT+ E+GG G + HS++G ARR+ V +
Sbjct: 449 LLLGPTGSGKTTVTRDVARLLAEE--RSVMVVDTARELGGAGVVAHSSLGLARRLLV-DS 505
Query: 186 SLQHKVMI-EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+ QH + EA+ +H EV++VD + ++ A R E G L+ +A G+
Sbjct: 506 AEQHLAAVEEAILSHAAEVVVVDGMAVQSLISASRLAREHGACLVASAVGD 556
>gi|386854853|ref|YP_006262593.1| AAA ATPase [Deinococcus gobiensis I-0]
gi|380002330|gb|AFD27518.1| AAA ATPase [Deinococcus gobiensis I-0]
Length = 301
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 98/180 (54%), Gaps = 3/180 (1%)
Query: 56 EVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMV 115
E ++E+++ S +G + D R G+EGTLHR + + + + +T RV +A G + +
Sbjct: 39 EPTMEDMKVLDS-LGAWRDDGRLGMEGTLHRFGRMDTAQQTSL-VTVRVAKAFVGLAEPL 96
Query: 116 YDLLHYGKS-ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 174
L + ++ +G PG GKT ++R++ R+L + R+ + D+SNEI GDG PHS
Sbjct: 97 RPWLEKAQDGVIIIGLPGAGKTALLRDVNRILGERLAGRLFVCDSSNEILGDGIQPHSIT 156
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
R+ + +P LQ + V+N P ++VDE+ + +A A RGV ++ T H
Sbjct: 157 DWLSRVPIGDPKLQLSKLNMVVKNFQPRWMVVDEVSSPDDARAIGYARSRGVRVVMTWHA 216
>gi|20807732|ref|NP_622903.1| stage III sporulation protein spoIIIAA [Thermoanaerobacter
tengcongensis MB4]
gi|254479690|ref|ZP_05092986.1| stage III sporulation protein AA [Carboxydibrachium pacificum DSM
12653]
gi|20516285|gb|AAM24507.1| stage III sporulation protein spoIIIAA [Thermoanaerobacter
tengcongensis MB4]
gi|214034376|gb|EEB75154.1| stage III sporulation protein AA [Carboxydibrachium pacificum DSM
12653]
Length = 330
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/165 (33%), Positives = 90/165 (54%), Gaps = 11/165 (6%)
Query: 97 IVGLTCRVGRAVSGHID--MVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQ- 151
+ G R+ + V G D M Y + G ++L + P GKTT++R+IAR LSD F
Sbjct: 127 VSGYNYRISKEVLGAADEIMEYLIDRQGSVYNLLIISPPQCGKTTLLRDIARALSDGFMG 186
Query: 152 ---KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
K+V I+D +EI G + +P +G R V + + + MI A+ + P+V++ D
Sbjct: 187 FGGKKVCIIDERSEIAGCYNGVPQLNVGI--RTDVLDRCPKAEGMIMAIRSMSPQVVVTD 244
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGG 252
EIG + + A R + GV +I T H + +E++ K P+L DL+ G
Sbjct: 245 EIGKKEDIEALRHVLNAGVKIITTVHAKDIEDLKKRPLLKDLVEG 289
>gi|317498108|ref|ZP_07956410.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_63FAA]
gi|316894585|gb|EFV16765.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_63FAA]
Length = 315
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGKSI--L 126
G +R GI GT+ ++ IR I GL RV V G D++Y GK I L
Sbjct: 106 GGHRVGICGTVVMDHDKVKTIRH----ISGLNIRVAHEVKGCADILYSRCTRMGKLIPTL 161
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEP 185
+ PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V +
Sbjct: 162 IISPPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMDA 218
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+ + M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP
Sbjct: 219 CEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPY 278
Query: 246 LSDLI 250
+ ++I
Sbjct: 279 MREII 283
>gi|291559558|emb|CBL38358.1| stage III sporulation protein AA [butyrate-producing bacterium
SSC/2]
Length = 308
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGKSI--L 126
G +R GI GT+ ++ IR I GL RV V G D++Y GK I L
Sbjct: 99 GGHRVGICGTVVMDHDKVKTIRH----ISGLNIRVAHEVKGCADILYSRCTRMGKLIPTL 154
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEP 185
+ PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V +
Sbjct: 155 IISPPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMDA 211
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+ + M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP
Sbjct: 212 CEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPY 271
Query: 246 LSDLI 250
+ ++I
Sbjct: 272 MREII 276
>gi|167767112|ref|ZP_02439165.1| hypothetical protein CLOSS21_01630 [Clostridium sp. SS2/1]
gi|167711087|gb|EDS21666.1| stage III sporulation protein AA [Clostridium sp. SS2/1]
Length = 342
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 98/185 (52%), Gaps = 15/185 (8%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGKSI--L 126
G +R GI GT+ ++ IR I GL RV V G D++Y GK I L
Sbjct: 133 GGHRVGICGTVVMDHDKVKTIRH----ISGLNIRVAHEVKGCADILYSRCTRMGKLIPTL 188
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEP 185
+ PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V +
Sbjct: 189 IISPPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMDA 245
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+ + M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP
Sbjct: 246 CEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPY 305
Query: 246 LSDLI 250
+ ++I
Sbjct: 306 MREII 310
>gi|188586330|ref|YP_001917875.1| stage III sporulation protein AA [Natranaerobius thermophilus
JW/NM-WN-LF]
gi|179351017|gb|ACB85287.1| stage III sporulation protein AA [Natranaerobius thermophilus
JW/NM-WN-LF]
Length = 322
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 97/192 (50%), Gaps = 21/192 (10%)
Query: 74 GDNRAGIEGTLH----RISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL-----HYGKS 124
G +R GI G + I IR + G+ R+ R + G + D L + +
Sbjct: 93 GGHRVGIVGRTYLKSGEIQTIRD----VSGINFRIAREIKGAGKKLVDKLIDKRINSFLN 148
Query: 125 ILFVGRPGVGKTTVMREIARVLS---DEFQK--RVVIVDTSNEIGGD-GDIPHSAIGTAR 178
L +G PG GKTT++R++ R+LS F + ++ ++D +EI G IP IG
Sbjct: 149 TLLIGPPGCGKTTILRDLTRLLSTGNKSFDRTFKITLIDERSEISGSVRGIPQKEIGL-- 206
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + K M+ AV PE+I+ DEIGT+ + +A + GV L+ + HG+ E
Sbjct: 207 RTDVLDGCPKAKGMMMAVRAMSPEIIVTDEIGTKEDINAVKEAMNSGVKLLLSIHGDSYE 266
Query: 239 NIIKNPILSDLI 250
++K P + +L+
Sbjct: 267 TLLKRPGIPELL 278
>gi|429762047|ref|ZP_19294454.1| stage III sporulation protein AA [Anaerostipes hadrus DSM 3319]
gi|429182593|gb|EKY23691.1| stage III sporulation protein AA [Anaerostipes hadrus DSM 3319]
Length = 345
Score = 78.6 bits (192), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/185 (34%), Positives = 97/185 (52%), Gaps = 15/185 (8%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGKSI--L 126
G +R GI GT+ ++ IR I GL RV V G D +Y GK I L
Sbjct: 136 GGHRVGICGTVVMDHDKVKTIRH----ISGLNIRVAHEVKGCADTLYSRCTRMGKLIPTL 191
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEP 185
+ PG GKTT++R++ R +SDE Q V +VD +EIG + + +G + V +
Sbjct: 192 IISPPGCGKTTLLRDMIRKISDEGQT-VGVVDERSEIGACYQGVAQNDLGI--QTDVMDA 248
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+ + M + + P+VI VDEIG++ + A A RG ++ TAHG+ E++ KNP
Sbjct: 249 CEKGQGMNMLIRSMAPDVIAVDEIGSKEDVEALFFCAYRGCSILATAHGKNKESLSKNPY 308
Query: 246 LSDLI 250
+ ++I
Sbjct: 309 MREII 313
>gi|56964243|ref|YP_175974.1| stage III sporulation protein AA [Bacillus clausii KSM-K16]
gi|56910486|dbj|BAD65013.1| stage III sporulation protein AA [Bacillus clausii KSM-K16]
Length = 309
Score = 78.2 bits (191), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 97/191 (50%), Gaps = 16/191 (8%)
Query: 73 GGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH-----YGKSIL 126
G +R G+ G T+ A+++ + + R+ R G + V D L+ ++ L
Sbjct: 89 AGGHRVGLAGKTVLENGAVQTIR-PVSSFNVRIARQKIGAAEKVIDKLYDRQTRSWQNAL 147
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARR 179
+G P GKTTV+R++AR++S +K +V IVD +EI G +P +G R
Sbjct: 148 LIGPPQTGKTTVLRDVARIVSTGSKKNHIPSCKVGIVDERSEIAGCVAGVPQHELGV--R 205
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
+ V + + + M+ + + P+V+IVDEIG E + A GV LI TAHG LE+
Sbjct: 206 VDVLDGCPKAEGMMMLIRSMSPDVLIVDEIGREEDVKAILEARHAGVSLIATAHGHTLED 265
Query: 240 IIKNPILSDLI 250
+ K P+ L
Sbjct: 266 VAKRPVFKGLF 276
>gi|429765574|ref|ZP_19297859.1| stage III sporulation protein AA [Clostridium celatum DSM 1785]
gi|429186025|gb|EKY26988.1| stage III sporulation protein AA [Clostridium celatum DSM 1785]
Length = 329
Score = 77.8 bits (190), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 77/281 (27%), Positives = 129/281 (45%), Gaps = 47/281 (16%)
Query: 4 FGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELE 63
+ +++LPS + + ++ K + E+ + +G+ + G K L T ++ E+L+
Sbjct: 25 YEEIYRMLPSGINEEVKRYFKIEGVQEIRVKIGK--QVMLTTSKGEKILDYT-ITNEDLK 81
Query: 64 YAQSAVGEFG----------------GDNRAGIEG----------TLHRISAIRSR-KGA 96
Y S + + G +R G+ G T+ IS++ R
Sbjct: 82 YMMSKISNYSLYAFEEEIKQGYITVKGGHRVGLAGECVMVNGEVRTIKNISSLNIRICNE 141
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ----- 151
+VG + RV + ++ + + VY+ L V P GKTT++R+IAR +S+
Sbjct: 142 VVGSSNRVMKYITNN-NKVYN-------TLIVSPPKCGKTTILRDIARNISNGMYSLNLR 193
Query: 152 -KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
K+V IVD +EI G + IP +G R V + L+ MI A+ + PEV+I DEI
Sbjct: 194 GKKVTIVDERSEIAGCYNGIPQMNVGV--RTDVLDNCLKRIGMIMAIRSLSPEVLICDEI 251
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
GTE + A GV +I T HG + +I + LI
Sbjct: 252 GTEGDLEALNMAFNSGVNIIVTVHGNDINDIYGREMFRKLI 292
>gi|253682298|ref|ZP_04863095.1| stage III sporulation protein AA [Clostridium botulinum D str.
1873]
gi|253562010|gb|EES91462.1| stage III sporulation protein AA [Clostridium botulinum D str.
1873]
Length = 298
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/264 (28%), Positives = 125/264 (47%), Gaps = 32/264 (12%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLG--EFGGKYLRSTE----------- 56
ILP +LR +L++ + E+ + + + Y+G E YL E
Sbjct: 9 ILPKELRAKLESIKNIDKFQEIRIKINK-KLILYVGNTEIILDYLVKKEDIKIILQRISN 67
Query: 57 --VSVEELEYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSG 110
+ E E Q + GG +R GI G+ ++ I++ I L R+ R V G
Sbjct: 68 YSIYAFEEELKQGYITIKGG-HRVGICGSCVIENEKVKTIKN----IASLNIRICREVIG 122
Query: 111 HIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 167
+ + + +L + P GKTT++R+I+R LSD +K++ IVD +EIG
Sbjct: 123 CSNNIMPYILNDDRVLNTIIISPPKCGKTTLLRDISRNLSDA-KKKICIVDERSEIGACF 181
Query: 168 D-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
+ +P IG R V + ++ + +I A+ + PEVII DEIGT + + GV
Sbjct: 182 EGVPQMNIGL--RTDVFDNCVKSQGIIMAIRSMAPEVIICDEIGTYKDMESIIMAMNSGV 239
Query: 227 MLIGTAHGEWLENIIKNPILSDLI 250
LI T HG +E++ + P+ +++
Sbjct: 240 NLITTIHGFGIEDLYRRPVFKEIL 263
>gi|381210320|ref|ZP_09917391.1| stage III sporulation protein AA [Lentibacillus sp. Grbi]
Length = 325
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/188 (31%), Positives = 95/188 (50%), Gaps = 17/188 (9%)
Query: 74 GDNRAGIEG---TLH-RISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI--LF 127
G +R G+ G TLH ++ AIR I R+ + G + L++ K + L
Sbjct: 87 GGHRVGLSGKVNTLHGQVKAIRH----ITFFNIRIAKQTIGAALPLIPYLYHNKYVNTLI 142
Query: 128 VGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGD-IPHSAIGTARRMQV 182
+G P GKTT++R++AR++ + K +V +VD +EIGG IP +G R V
Sbjct: 143 IGPPQTGKTTLIRDLARMIGSGWDKAGAHKVGVVDERSEIGGSHKGIPQHDLGV--RTDV 200
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + + M+ + + PEV++VDEIG+E++ A GV ++ T H LE + K
Sbjct: 201 MDACPKDEGMMMMIRSMSPEVLVVDEIGSESDVQALMEAVNAGVAVVCTIHSSSLEALKK 260
Query: 243 NPILSDLI 250
P L L
Sbjct: 261 RPSLKPLF 268
>gi|332981353|ref|YP_004462794.1| stage III sporulation protein AA [Mahella australiensis 50-1 BON]
gi|332699031|gb|AEE95972.1| stage III sporulation protein AA [Mahella australiensis 50-1 BON]
Length = 332
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/271 (27%), Positives = 129/271 (47%), Gaps = 29/271 (10%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGR---LPEARYLGEFGGKYLRSTEVSVEEL 62
A +PS+L ++++ R +++ R L EA ++ + + ++ +++
Sbjct: 27 AMLNKIPSELSNKMEEIRMRVNKPLMLISANRDYMLDEAGHICSDPKQAYKVNKLDIDKT 86
Query: 63 -----EYAQSAVGE--------FGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
EY+ A+ E G R G+ G + SAIR+ K I GL R+GR +
Sbjct: 87 LQFMSEYSLYAIEEELRNGYITLAGGYRVGVVGKAVMAGSAIRTIK-YISGLNVRIGREL 145
Query: 109 SGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSDE----FQKRVVIVDTS 160
G D V + + L V P GKTT++R+IAR LSD ++VVIVD
Sbjct: 146 IGVADRVMRFIIDSDAKPLHTLVVSPPQCGKTTLLRDIARQLSDGCSACIPRKVVIVDER 205
Query: 161 NEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 219
+E+ G I + +G R V + + ++ A+ P+VI+ DEIG + + +A
Sbjct: 206 SELAGSYMGIAQNDVGI--RTDVLDACPKAAGIMMAIRAMSPDVIVTDEIGRQEDVYAIE 263
Query: 220 SIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
G++++ +AHG+ + +I PIL L+
Sbjct: 264 EALNSGIIVVASAHGKDISDISNRPILKQLM 294
>gi|118444024|ref|YP_878042.1| stage III sporulation protein AA [Clostridium novyi NT]
gi|118134480|gb|ABK61524.1| stage III sporulation protein AA, SpoIIIAA [Clostridium novyi NT]
Length = 298
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 129/269 (47%), Gaps = 25/269 (9%)
Query: 1 MNAFGAFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYL--GEFGGKYLRSTE-- 56
M+ F+ +LP +++ +LQ+ + +L E+ + + + P YL E Y+ E
Sbjct: 1 MSTKDVFY-VLPKEMQMKLQSITIIDKLQEIRIKVNK-PLIVYLENKEIILDYIIKKEDI 58
Query: 57 -----------VSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVG 105
+ E E Q + GG +R GI G+ + I L R+
Sbjct: 59 KTILQRISNYSIYAFEEEIKQGYITIKGG-HRVGICGSCVIQNETVKTIKNIASLNIRIC 117
Query: 106 RAVSGHIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNE 162
R V G + V + G+++L + P GKTT++R+I R LS +K+V I+D +E
Sbjct: 118 REVLGCSNKVMPYILQGENVLNTIIISPPKCGKTTLIRDITRNLSTA-KKKVCIIDERSE 176
Query: 163 IGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I + +P +G R + + ++ + +I A+ + PEVI+ DEIGT ++ +
Sbjct: 177 IASCFEGVPQMDVGI--RTDILDNCIKSQGIIMAIRSMAPEVIVCDEIGTHSDIQSIVMA 234
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV LI T HG +E++ + P+ ++++
Sbjct: 235 MNSGVNLITTIHGFGIEDLYRRPVFNEVV 263
>gi|336114346|ref|YP_004569113.1| stage III sporulation protein AA [Bacillus coagulans 2-6]
gi|335367776|gb|AEH53727.1| stage III sporulation protein AA [Bacillus coagulans 2-6]
Length = 310
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILF 127
G +R G G + ++ AIR R+ R G D LH G+ S +
Sbjct: 87 GGHRVGFAGKVILENGQVKAIRY----FSSFNIRIAREKIGTADPYLFALHNGRWLSAMI 142
Query: 128 VGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRM 180
+G P GKTT +R+IAR++S +R V IVD +EI G IP G R+
Sbjct: 143 IGAPQTGKTTFLRDIARLISSGIPERGISPAKVGIVDERSEIAGCVHGIPQLHFGP--RV 200
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+VI+VDEIG E +A A G+ L+ T HGE +I
Sbjct: 201 DVLDACPKAEGMMMLIRSMSPDVIVVDEIGREEDAAAIMEAVNAGISLVMTTHGENFRDI 260
Query: 241 IKNPILSDLI 250
K PIL ++
Sbjct: 261 QKRPILKKIL 270
>gi|347753237|ref|YP_004860802.1| stage III sporulation protein AA [Bacillus coagulans 36D1]
gi|347585755|gb|AEP02022.1| stage III sporulation protein AA [Bacillus coagulans 36D1]
Length = 308
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/190 (33%), Positives = 90/190 (47%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILF 127
G +R G G + ++ AIR R+ R G D LH G S +
Sbjct: 85 GGHRVGFAGKVILENGQVKAIRY----FSSFNIRIAREKIGTADPYLSALHNGHWLSAMI 140
Query: 128 VGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRM 180
+G P GKTT +R+IAR++S +R V IVD +EI G IP G R+
Sbjct: 141 IGAPQTGKTTFLRDIARLISTGIPERGISPAKVGIVDERSEIAGCVHGIPQLHFGP--RV 198
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+VIIVDEIG E +A A G+ L+ T HGE +I
Sbjct: 199 DVLDACPKAEGMMMLIRSMSPDVIIVDEIGREEDAAAIMEAVNAGISLVMTTHGENFRDI 258
Query: 241 IKNPILSDLI 250
K PIL ++
Sbjct: 259 NKRPILKKIL 268
>gi|187935302|ref|YP_001886604.1| stage III sporulation protein AA [Clostridium botulinum B str.
Eklund 17B]
gi|187723455|gb|ACD24676.1| stage III sporulation protein AA [Clostridium botulinum B str.
Eklund 17B]
Length = 306
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 132/279 (47%), Gaps = 49/279 (17%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
F I PS++ + L++ K QL E+ + + + P Y + G+ + + S EE++
Sbjct: 7 FLNIFPSNIFNVLKDKCKLEQLYEIRIKIDK-PIIVYSNK--GESIVNYNSSKEEMKSII 63
Query: 67 SAVGEFG----------------GDNRAGIEG----------TLHRISAIRSRKG-AIVG 99
+ + G +R GI G T+ IS+I R ++G
Sbjct: 64 QKISNYSLYAYEEDIKQGFITIKGGHRIGIAGECVMCNGEVKTIRNISSINVRFCREVIG 123
Query: 100 LTCRVGR-AVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ------K 152
+ ++ + VSG D +Y+ + + P GKTT++R+I+R +S+ + K
Sbjct: 124 CSNKIMKYIVSG--DRIYNTI-------IISPPKCGKTTILRDISRNISNGMKSLGLNGK 174
Query: 153 RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 211
+V ++D +EIG +P S +G R + + L+ + MI ++ + PEV+I DEIGT
Sbjct: 175 KVSVIDERSEIGACYFGVPQSDLGI--RTDILDNCLKKEGMIMSIRSLSPEVLICDEIGT 232
Query: 212 EAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ + A GV +I + HG +++I K + +LI
Sbjct: 233 KGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|188590784|ref|YP_001921561.1| stage III sporulation protein AA [Clostridium botulinum E3 str.
Alaska E43]
gi|188501065|gb|ACD54201.1| stage III sporulation protein AA [Clostridium botulinum E3 str.
Alaska E43]
Length = 306
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 49/279 (17%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
F I PS++ + L++ K QL E+ + + + P Y + G+ + + S EE++
Sbjct: 7 FLNIFPSNIFNVLKDKCKLEQLYEIRIKINK-PIIVYSNK--GESIVNYNPSKEEMKSII 63
Query: 67 SAVGEFG----------------GDNRAGIEG----------TLHRISAIRSRKG-AIVG 99
+ + G +R GI G T+ IS+I R ++G
Sbjct: 64 QKISNYSLYAYEEDIKQGFITIKGGHRIGIAGECVMCNGEVKTIRNISSINVRFCREVIG 123
Query: 100 LTCRVGR-AVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ------K 152
+ ++ + +SG D +Y+ + + P GKTT++R+I+R +S+ + K
Sbjct: 124 CSNKIMKHIISG--DRIYNTI-------IISPPKCGKTTILRDISRNISNGMKSLGLNGK 174
Query: 153 RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 211
+V ++D +EIG +P S +G R + + L+ + MI ++ + PEV+I DEIGT
Sbjct: 175 KVSVIDERSEIGACYFGVPQSDLGI--RTDILDNCLKKEGMIMSIRSLSPEVLICDEIGT 232
Query: 212 EAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ + A GV +I + HG +++I K + +LI
Sbjct: 233 KGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|331269432|ref|YP_004395924.1| stage III sporulation protein AA [Clostridium botulinum BKT015925]
gi|329125982|gb|AEB75927.1| stage III sporulation protein AA [Clostridium botulinum BKT015925]
Length = 319
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 126/264 (47%), Gaps = 32/264 (12%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLG--EFGGKYLRSTE----------- 56
ILP +LR +L++ +L E+ + + + Y+G E YL E
Sbjct: 30 ILPKELRSKLESIKSVDKLQEIRIKINK-KLIVYIGNIEIILDYLVKKEDIKVILQRISN 88
Query: 57 --VSVEELEYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSG 110
+ E E Q + GG +R GI G+ ++ I++ I L R+ R V G
Sbjct: 89 YSIYAFEEEIKQGYITIKGG-HRVGICGSCVIENEKVKTIKN----IASLNIRICREVIG 143
Query: 111 HIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 167
+ + + + + + P GKTT++R+I+R LSD +K++ IVD +E+G
Sbjct: 144 CSNNIMPYILNNSRVFNTIIISPPKCGKTTLIRDISRNLSDA-KKKICIVDERSEVGACF 202
Query: 168 D-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
+ +P +G R V + ++ + +I A+ + PE+I+ DEIGT + + GV
Sbjct: 203 EGVPQMNVGL--RTDVFDNCVKSEGIIMAIRSMAPEIIVCDEIGTYKDMESIIMAMNSGV 260
Query: 227 MLIGTAHGEWLENIIKNPILSDLI 250
LI T HG +E++ + P+ +++
Sbjct: 261 NLITTIHGFGIEDLYRRPVFKEIL 284
>gi|410722781|ref|ZP_11362034.1| stage III sporulation protein AA [Clostridium sp. Maddingley
MBC34-26]
gi|410603777|gb|EKQ58203.1| stage III sporulation protein AA [Clostridium sp. Maddingley
MBC34-26]
Length = 306
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/191 (31%), Positives = 96/191 (50%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---L 126
G +R GI G + IR+ I + R+ R V G D V + I +
Sbjct: 87 GGHRIGIAGECVMEKGEVKTIRN----ISSVNVRICREVIGASDKVMKYIASKSRIYNTI 142
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDG-DIPHSAIGTARR 179
+ P GKTT++R+IAR +S+ K+VV+VD +EIG +P + +G R
Sbjct: 143 IISPPKCGKTTILRDIARNISNGMSILGLNGKKVVVVDERSEIGACHLGVPQTDLGL--R 200
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + L+ + +I A+ + PEV+I DEIGT+ + + GV +I T HG +E+
Sbjct: 201 TDVLDNCLKREGLIMAIRSLSPEVLICDEIGTQGDIESLIMAFNSGVNIITTIHGFTIED 260
Query: 240 IIKNPILSDLI 250
+ K +LSDL+
Sbjct: 261 LYKRKVLSDLL 271
>gi|251778035|ref|ZP_04820955.1| stage III sporulation protein AA [Clostridium botulinum E1 str.
'BoNT E Beluga']
gi|243082350|gb|EES48240.1| stage III sporulation protein AA [Clostridium botulinum E1 str.
'BoNT E Beluga']
Length = 306
Score = 75.5 bits (184), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 71/279 (25%), Positives = 132/279 (47%), Gaps = 49/279 (17%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQ 66
F I PS++ + L++ K QL E+ + + + P Y + G+ + + S EE++
Sbjct: 7 FLNIFPSNIFNVLKDKCKLEQLYEIRIKINK-PIIVYSNK--GESIVNYNPSKEEMKSII 63
Query: 67 SAVGEFG----------------GDNRAGIEG----------TLHRISAIRSRKG-AIVG 99
+ + G +R GI G T+ IS+I R ++G
Sbjct: 64 QKISNYSLYAYEEDIKQGFITIKGGHRIGIAGECVMCNGEVKTIRNISSINVRFCREVIG 123
Query: 100 LTCRVGR-AVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ------K 152
+ ++ + +SG D +Y+ + + P GKTT++R+I+R +S+ + K
Sbjct: 124 CSNKIMKHIISG--DRIYNTI-------IISPPKCGKTTILRDISRNISNGMKSLGLNGK 174
Query: 153 RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 211
+V ++D +EIG +P S +G R + + L+ + MI ++ + PEV+I DEIGT
Sbjct: 175 KVSVIDERSEIGACYLGVPQSDLGI--RTDILDNCLKKEGMIMSIRSLSPEVLICDEIGT 232
Query: 212 EAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ + A GV +I + HG +++I K + +LI
Sbjct: 233 KGDIEALIMAFNSGVNIITSIHGFTIDDIYKRKVFKELI 271
>gi|359412675|ref|ZP_09205140.1| stage III sporulation protein AA [Clostridium sp. DL-VIII]
gi|357171559|gb|EHI99733.1| stage III sporulation protein AA [Clostridium sp. DL-VIII]
Length = 309
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 96/191 (50%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL---HYGKSIL 126
G +R GI G + IR+ I + R+ R V G D V + H + +
Sbjct: 90 GGHRIGIAGECVMEKGEVKTIRN----ISSINVRICREVIGCSDKVMKYIASSHRIYNTI 145
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGG-DGDIPHSAIGTARR 179
+ P GKTT++R+IAR +S+ ++VV++D +EIG +P S +G R
Sbjct: 146 VISPPKCGKTTILRDIARNISNGVSSLGLNGRKVVVIDERSEIGACHFGVPQSDLGI--R 203
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + L+ + +I A+ + PEV+I DEIGT+ + A GV +I T HG +E+
Sbjct: 204 TDVLDNCLKREGLIMAIRSLSPEVLICDEIGTKGDIEALIMAFNSGVNIITTIHGFTIED 263
Query: 240 IIKNPILSDLI 250
+ K +L DL+
Sbjct: 264 LYKRKVLGDLL 274
>gi|433444521|ref|ZP_20409393.1| stage III sporulation protein AA [Anoxybacillus flavithermus
TNO-09.006]
gi|432001549|gb|ELK22424.1| stage III sporulation protein AA [Anoxybacillus flavithermus
TNO-09.006]
Length = 307
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 78/273 (28%), Positives = 129/273 (47%), Gaps = 34/273 (12%)
Query: 6 AFWQILPSDLRDRLQNDS--KRGQLLEVILDLGRLPEARYLG-EFGGKYLRSTEVSVEEL 62
A ILP L D +Q+ S + + E+ + + R E G + ++ TE VE L
Sbjct: 3 AVLNILPKTLVDAIQSFSIFPQSTIEEIRIRIHRPLEVIAGGRSYICPHVVQTEEGVELL 62
Query: 63 ----EYAQSAVGE--------FGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGR 106
+Y+ + E G +R G+ G + ++ AIR I R+ R
Sbjct: 63 NKLSQYSLYTIEEELKKGYITIQGGHRVGLAGKVIVEDGKVKAIRH----ITSFNIRMAR 118
Query: 107 AVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVD 158
G + + L+ G+ + + +G P GKTT++R+IAR++S ++V IVD
Sbjct: 119 QQIGIAEPLLPYLYDGRWMNTIIIGAPQTGKTTLLRDIARIVSGGVTEQHIAPRKVGIVD 178
Query: 159 TSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
+EI G IP G R+ V + + + M+ + + P+V++VDEIG+EA+ A
Sbjct: 179 ERSEIAGCVKGIPQFTFGC--RVDVLDACPKAEGMMMMIRSMSPDVLVVDEIGSEADCTA 236
Query: 218 CRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L TAHG L++++K P L +I
Sbjct: 237 ILEAVHAGVGLFMTAHGRHLDDLMKRPSLRPII 269
>gi|291542877|emb|CBL15987.1| Uncharacterized protein conserved in bacteria [Ruminococcus bromii
L2-63]
Length = 316
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 63 EYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD- 117
E V +GG +RAGI GT +I IR I + R+GR G D +Y+
Sbjct: 99 EIVNGFVTMYGG-HRAGICGTAVVNNGKIVNIRD----ITSINVRIGREHKGCADSLYNK 153
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIP-HSAIGT 176
++ +L G P GKTTV+R++AR+LS + +K V ++D E+ G + IG
Sbjct: 154 IIAVSGGVLICGAPCSGKTTVLRDLARLLSTKGKKNVALIDERGELAGTASGKFQNDIGM 213
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
V + + + M+ A+ + PE+II DEIG++ + +A GV +I + H
Sbjct: 214 C---DVYDSYNKSEAMLHAIRSMAPEIIICDEIGSKEDIYAVEKSINCGVRIISSTH 267
>gi|255524184|ref|ZP_05391144.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|296186639|ref|ZP_06855041.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|255512169|gb|EET88449.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
gi|296048676|gb|EFG88108.1| stage III sporulation protein AA [Clostridium carboxidivorans P7]
Length = 308
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 86/165 (52%), Gaps = 12/165 (7%)
Query: 96 AIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQ- 151
+I L R+ R V G D + D + +++ + P GKTT++R+I R +SD +
Sbjct: 111 SIASLNIRICREVIGCSDPLMDFIIKNNNVINTIVISPPKCGKTTLIRDIVRNISDGMKQ 170
Query: 152 -----KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
K+V ++D +EIG + IP +G R + + L+ + ++ A+ + P+V++
Sbjct: 171 KAFTGKKVCVIDERSEIGACYNGIPQLKLGL--RTDILDSCLKSQGIMMAIRSMSPDVVV 228
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
DEIGT + + GV LI T HG +E++ K P+ +++
Sbjct: 229 CDEIGTYKDMDSILFALNSGVNLITTIHGYGIEDLYKRPVFKEIV 273
>gi|386714784|ref|YP_006181107.1| stage III sporulation protein AA [Halobacillus halophilus DSM 2266]
gi|384074340|emb|CCG45833.1| stage III sporulation protein AA [Halobacillus halophilus DSM 2266]
Length = 325
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/185 (30%), Positives = 91/185 (49%), Gaps = 10/185 (5%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG---KSILFVGR 130
G +R G+ G + ++ I + RV + +G I+ + L+ S L +G
Sbjct: 85 GGHRVGLAGKANTVNHQVETLKHIAFMNIRVAKNTTGQINQLIPYLYQNGRWTSTLIIGP 144
Query: 131 PGVGKTTVMREIARVL----SDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 185
P GKTT++RE+A+ + D +V IVD +EI +P +G R V +
Sbjct: 145 PHSGKTTLLRELAQRIGSGHQDHRASKVAIVDERSEIAASLRGVPQLDVG--ERTDVMDA 202
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+ + M+ + + PEV+IVDEIG A+A+A R GV +I + HG + N+ K P
Sbjct: 203 CPKAEGMMMMIRSMSPEVLIVDEIGGVADANAIREATFTGVEVICSIHGTSITNVQKRPS 262
Query: 246 LSDLI 250
+LI
Sbjct: 263 ARELI 267
>gi|212638773|ref|YP_002315293.1| stage III sporulation protein AA [Anoxybacillus flavithermus WK1]
gi|212560253|gb|ACJ33308.1| Stage III sporulation protein AA (mutants block sporulation after
engulfment) [Anoxybacillus flavithermus WK1]
Length = 313
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 96/190 (50%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILF 127
G +R G+ G + ++ AIR I R+ R G + L+ G+ + +
Sbjct: 92 GGHRVGLAGKVITEGGKVKAIRH----ITSFNIRMARQQIGMAAPLLPYLYDGRWFNTVI 147
Query: 128 VGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
+G P GKTT++R+IAR++S ++V IVD +EI G IP G R+
Sbjct: 148 IGAPQTGKTTLLRDIARIVSSGVTEQHIAPRKVGIVDERSEIAGCVKGIPQFTFGC--RV 205
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+V+IVDEIG+EA+ A G+ L TAHG L+++
Sbjct: 206 DVLDACPKAEGMMMMIRSMSPDVLIVDEIGSEADCTAILEAVHAGIGLFMTAHGRHLDDL 265
Query: 241 IKNPILSDLI 250
+K P L +I
Sbjct: 266 MKRPSLRPII 275
>gi|297616604|ref|YP_003701763.1| stage III sporulation protein AA [Syntrophothermus lipocalidus DSM
12680]
gi|297144441|gb|ADI01198.1| stage III sporulation protein AA [Syntrophothermus lipocalidus DSM
12680]
Length = 326
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/158 (34%), Positives = 84/158 (53%), Gaps = 8/158 (5%)
Query: 99 GLTCRVGRAVSGHIDMVYD-LLHYGKSIL---FVGRPGVGKTTVMREIARVLSD-EFQKR 153
GL RV R + G + + L+ G+ IL V P GKTT++R++ R+ SD
Sbjct: 131 GLAFRVAREMVGCAEPIASRLIVTGRRILNTLIVSPPRCGKTTLLRDLTRLYSDGPANLN 190
Query: 154 VVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 212
VV++D +EI IP +G R V + + M+ AV + P +++VDEIG
Sbjct: 191 VVVIDERSEIAACYQGIPQLNVGN--RTDVLDGCPKALGMMMAVRSLSPHLVVVDEIGRP 248
Query: 213 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A+A A + GV +I TAHG LE+I + PI++ L+
Sbjct: 249 ADAEALQECVNAGVSVIATAHGTDLEDISRRPIMAGLL 286
>gi|150016566|ref|YP_001308820.1| sporulation stage III, protein AA [Clostridium beijerinckii NCIMB
8052]
gi|149903031|gb|ABR33864.1| Sporulation stage III, protein AA [Clostridium beijerinckii NCIMB
8052]
Length = 306
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 128/273 (46%), Gaps = 43/273 (15%)
Query: 10 ILPSDLRDRLQNDSKRGQLLEVILDLGR--LPEARYLGEFGGKYLRSTE----VSVEELE 63
I P+ + + L++ + Q+ E+ + +G+ L ++Y GE Y+ + E + +
Sbjct: 10 IFPAKIGNLLKDRLNKEQVYELRIKIGKPILVYSKY-GESIINYISTKEDMKSIMQKVSN 68
Query: 64 YAQSAVGE--------FGGDNRAGIEG----------TLHRISAIRSRKGAIVGLTCRVG 105
Y+ A E G +R GI G T+ IS++ R CR
Sbjct: 69 YSLYAYEEDIRQGFITIKGGHRIGIAGECVMEKGEVKTIRNISSVNIR-------ICREV 121
Query: 106 RAVSGHIDMVYDLLHYG-KSILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVD 158
S + M Y + Y + + + P GKTT++R+IAR +S K+V ++D
Sbjct: 122 IGCSNKV-MKYIISAYKVYNTIIISPPKCGKTTILRDIARNISSGMPSLGIAGKKVAVID 180
Query: 159 TSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
+EIG IP S +G R V + L+ + +I A+ + PEV+I DEIGT+ + A
Sbjct: 181 ERSEIGACYFGIPQSDLGI--RTDVLDNCLKREGLIMAIRSLSPEVLICDEIGTKGDIEA 238
Query: 218 CRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV +I T HG +E++ K +LSDL+
Sbjct: 239 LIMAFNSGVNIITTIHGFTIEDLYKRRVLSDLL 271
>gi|253578537|ref|ZP_04855809.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251850855|gb|EES78813.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 312
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 75/268 (27%), Positives = 118/268 (44%), Gaps = 47/268 (17%)
Query: 25 RGQLLEVILDLGRLPEAR-------YLGEFGG----------KYLRSTEVSVEELEYA-- 65
R L++ LD +L E R +L GG +YL +TE E LEY
Sbjct: 18 RNLLMDAKLDYDKLYEIRLRVGRPLFLTYDGGECFLRKPGQEQYLVTTEDLKETLEYVTG 77
Query: 66 -----------QSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTC---RVGRAVSGH 111
Q + GG +R G+ G ++ R R + ++C R+ + G
Sbjct: 78 YSLYAYEDEIRQGFISVQGG-HRVGVTG---KVVLDRGRIMGMKYISCINVRLAHEIQGC 133
Query: 112 IDMVYDLLHYGK---SILFVGRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSNEIG 164
D V + K + L + P GKTT++R+I R LS+ + + +VD +E+
Sbjct: 134 ADKVMPYIRTEKWVANTLIISPPRCGKTTLLRDIIRQLSNGWANTQGLTIGVVDERSELA 193
Query: 165 GDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP + +G R V + + + M V + P+V+ VDE+G E + A S+
Sbjct: 194 GCYQGIPQNDLGM--RTDVLDCCPKSEGMQMLVRSMSPDVVAVDELGCEEDFKAVDSVIH 251
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLIG 251
G LI TAHG LE+++ P L+G
Sbjct: 252 CGCKLIATAHGSCLEDVLDQPFFYKLMG 279
>gi|387929684|ref|ZP_10132361.1| stage III sporulation protein AA [Bacillus methanolicus PB1]
gi|387586502|gb|EIJ78826.1| stage III sporulation protein AA [Bacillus methanolicus PB1]
Length = 307
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/190 (32%), Positives = 94/190 (49%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHID-MVYDLLHYG-KSILF 127
G +R G+ G + ++ AIR I R+ R G D +V L H G +
Sbjct: 86 GGHRVGLAGKVILENSKVKAIRD----ISSFNIRIARERIGIADCLVPFLFHDGWLHTMI 141
Query: 128 VGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
+G P GKTT++R+IAR++S + +V IVD +EI G IP G R+
Sbjct: 142 IGPPQTGKTTLLRDIARIISTGNEDLGFGASKVGIVDERSEIAGCVKGIPQLTFGN--RI 199
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+V++VDEIG E +A A G+ LI T HG LE +
Sbjct: 200 DVLDACPKAEGMMMMIRSMSPDVLVVDEIGREEDALAIMEAVNAGIKLIMTTHGSSLEEV 259
Query: 241 IKNPILSDLI 250
K P L +++
Sbjct: 260 RKRPSLKNIL 269
>gi|238917027|ref|YP_002930544.1| stage III sporulation protein AA [Eubacterium eligens ATCC 27750]
gi|238872387|gb|ACR72097.1| stage III sporulation protein AA [Eubacterium eligens ATCC 27750]
Length = 289
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/248 (28%), Positives = 114/248 (45%), Gaps = 18/248 (7%)
Query: 6 AFWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARY-LGEFGGKY-------LRSTEV 57
+ ++ILP +L + + + E+ L GRLP A GE G R +
Sbjct: 10 SLYKILPDELIKDIGIYAGFQHVREIRLRTGRLPAAICDNGEHRGAVPVDEHMITRILSI 69
Query: 58 SVEELEYAQSAVGEFG-----GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ YA + G G +R G+ G + + + + R+ + + G
Sbjct: 70 ATNYSSYAYESCMANGFLTIKGGHRIGLGGQVIWENGKVKNFLHVTFMCIRIAKQMKGCA 129
Query: 113 DMVYD-LLHYG-KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDI 169
D + D LL G K + + PG GKTT++R+I R LSD ++K VV++D EI +
Sbjct: 130 DNIMDELLKDGLKHTIIISPPGFGKTTLLRDIIRQLSDIYRKNVVLIDERCEIAACVNGV 189
Query: 170 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
P + IG R V + + + AV + P+V+ +DEIG E + A + + G +I
Sbjct: 190 PCNDIGC--RTDVLDGCNKLTGVYMAVRSLSPQVVAMDEIGGEDDIKAVKYCIKSGCAVI 247
Query: 230 GTAHGEWL 237
GTAHG +
Sbjct: 248 GTAHGSGI 255
>gi|365157824|ref|ZP_09354069.1| stage III sporulation protein AA [Bacillus smithii 7_3_47FAA]
gi|363622494|gb|EHL73653.1| stage III sporulation protein AA [Bacillus smithii 7_3_47FAA]
Length = 309
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/135 (35%), Positives = 75/135 (55%), Gaps = 9/135 (6%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDG-DIPHSAIG 175
K + +G P GKTT++R+IARV+S + +V IVD +EI G IP + G
Sbjct: 137 KHTMIIGAPQTGKTTLLRDIARVVSTGCDQLNIPSLKVGIVDERSEIAGCMFGIPQLSFG 196
Query: 176 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
R+ V + + + M+ + + P+V++VDEIG E + A GV L+ T HG+
Sbjct: 197 P--RVDVLDACPKAEGMMMMIRSMSPDVLVVDEIGREEDRMAVLEAVNAGVKLVMTTHGD 254
Query: 236 WLENIIKNPILSDLI 250
LE I K P+L+D++
Sbjct: 255 SLEEIQKRPLLADIV 269
>gi|403238245|ref|ZP_10916831.1| stage III sporulation protein AA [Bacillus sp. 10403023]
Length = 307
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 9/135 (6%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD-GDIPHSAIG 175
K+ + +G P GKTT++R++AR++S Q + + IVD +EI G +P +++G
Sbjct: 137 KNTIIIGPPQTGKTTLLRDLARMISTGIQSKSIPAMKVGIVDERSEIAGCVKGVPQASLG 196
Query: 176 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
R+ V + + + M+ + + P+V+IVDEIG E ++ A GV LI TAHG
Sbjct: 197 P--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGREEDSLAIMEAVNAGVSLIVTAHGH 254
Query: 236 WLENIIKNPILSDLI 250
+ +++K P L +I
Sbjct: 255 QISDLLKRPSLEKII 269
>gi|317132167|ref|YP_004091481.1| stage III sporulation protein AA [Ethanoligenens harbinense YUAN-3]
gi|315470146|gb|ADU26750.1| stage III sporulation protein AA [Ethanoligenens harbinense YUAN-3]
Length = 336
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 86/177 (48%), Gaps = 9/177 (5%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG---KSILFVGR 130
G +RAG+ GT S I G+ R+ R G D + + + + G
Sbjct: 107 GGHRAGLCGTAVLQGGTVSNLRDISGINLRIAREFRGAADGLLAAIGTSGRVRGTILAGP 166
Query: 131 PGVGKTTVMREIARVLSDEF--QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSL 187
PG GKTTV+R++AR LS+ + RV +VD EI +P + IG + V +
Sbjct: 167 PGCGKTTVLRDLARQLSNGVSGRCRVSVVDERGEIAATFKGVPQNDIG---QCDVLDGYP 223
Query: 188 QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ + +++AV P+V+I DEIG E +A A + GV +I +AH +E + P
Sbjct: 224 KGEGILQAVRCLSPDVVICDEIGGETDARAVAASLNAGVAVIASAHAAKMEELFARP 280
>gi|433462230|ref|ZP_20419819.1| stage III sporulation protein AA [Halobacillus sp. BAB-2008]
gi|432189119|gb|ELK46252.1| stage III sporulation protein AA [Halobacillus sp. BAB-2008]
Length = 325
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 66/270 (24%), Positives = 118/270 (43%), Gaps = 36/270 (13%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++ P + L ND G++ E+ L + E L ++ V+ E L + +
Sbjct: 6 RLFPPSFQRFLMNDVSWGKVQEIRLRVNHPLEV--LDGASHTSVKGIIVTAEHLAFVLNQ 63
Query: 69 VGEFG----------------GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAV 108
+ +F G +R G+ G + HRI ++ I + RV R V
Sbjct: 64 ISQFSLYRLQDELKEGFLTIEGGHRVGLAGKVNTSGHRIDTLKH----ITFMNIRVAREV 119
Query: 109 SGHIDMVYDLLHYG---KSILFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSN 161
+G + + L+ KS + +G P GKTT++R +++ + + +V +VD +
Sbjct: 120 AGQVSSLLPFLYADGRWKSTMIIGPPHSGKTTLLRALSKWIGSDHTGYRGCKVAVVDERS 179
Query: 162 EIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 220
EI +P +G R V + + M+ + + P+V+IVDEIG +A A R
Sbjct: 180 EIAASLRGVPQLEVGV--RTDVMDGCPKAAGMMMMIRSMSPDVLIVDEIGGLEDADAVRE 237
Query: 221 IAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ GV +I + HG L+ + K P L+
Sbjct: 238 ASYTGVQVICSIHGRTLDGVRKRPSARSLV 267
>gi|294501214|ref|YP_003564914.1| stage III sporulation protein AA [Bacillus megaterium QM B1551]
gi|295706561|ref|YP_003599636.1| stage III sporulation protein AA [Bacillus megaterium DSM 319]
gi|294351151|gb|ADE71480.1| stage III sporulation protein AA [Bacillus megaterium QM B1551]
gi|294804220|gb|ADF41286.1| stage III sporulation protein AA [Bacillus megaterium DSM 319]
Length = 315
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 97/190 (51%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH--YGKSILF 127
G +R G+ G + ++ IR + R+ + G + + L+ Y +S +
Sbjct: 87 GGHRVGLAGKVVTENGQVRVIRD----VSSFNIRIAKQKIGISNQLIPFLYNRYWQSTVI 142
Query: 128 VGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
+G P GKTT++R++ARV+S ++ +V IVD +EI G +P G+ RM
Sbjct: 143 IGPPQTGKTTMIRDLARVISTGIERSKIPPFKVGIVDERSEIAGAVKGVPQHTFGS--RM 200
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
+ + + + M+ + + P+V+IVDE+G+E + A GV +I T HG ++++
Sbjct: 201 DLLDSCPKAEGMMMMIRSMSPDVLIVDEVGSEEDCKAVLEAVNAGVRVIMTVHGYDIDDL 260
Query: 241 IKNPILSDLI 250
+K P L L+
Sbjct: 261 MKRPTLQALM 270
>gi|168186187|ref|ZP_02620822.1| stage III sporulation protein AA [Clostridium botulinum C str.
Eklund]
gi|169295742|gb|EDS77875.1| stage III sporulation protein AA [Clostridium botulinum C str.
Eklund]
Length = 298
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 99/182 (54%), Gaps = 9/182 (4%)
Query: 74 GDNRAGIEGT-LHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVG 129
G +R GI G+ + + AI++ K I L R+ R V G + + + +++ + +
Sbjct: 86 GGHRVGICGSCVIQDEAIKTIKN-IASLNIRICREVIGCSNKIMPYILKRENVFNTIIIS 144
Query: 130 RPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQ 188
P GKTT++R+I+R LS +K++ I+D +EI + +P +G R + + ++
Sbjct: 145 PPKCGKTTLIRDISRNLSIA-KKKICIIDERSEIASCFEGVPQMDVGI--RTDILDNCVK 201
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSD 248
+ +I A+ + PEVI+ DEIGT + + GV LI T HG +E++ + P+ ++
Sbjct: 202 SQGIIMAIRSMAPEVIVCDEIGTHRDVESIIMAMNSGVNLITTIHGFGIEDLYRRPVFNE 261
Query: 249 LI 250
+I
Sbjct: 262 VI 263
>gi|297544559|ref|YP_003676861.1| stage III sporulation protein AA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
gi|296842334|gb|ADH60850.1| stage III sporulation protein AA [Thermoanaerobacter mathranii
subsp. mathranii str. A3]
Length = 332
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 176
+IL + P GKTT++R+IAR +S+ K+V IVD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDIARWISNGIDFLGFTGKKVGIVDERSEIAGCYNGIPQLDVGI 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + MI + + P+V++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAHGMIMLIRSMSPQVVVTDEIGRKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 237 LENIIKNPILSDLI 250
+E+++K PIL D+I
Sbjct: 276 IEDLMKKPILKDVI 289
>gi|384044940|ref|YP_005492957.1| stage III sporulation protein AA [Bacillus megaterium WSH-002]
gi|345442631|gb|AEN87648.1| Stage III sporulation protein AA [Bacillus megaterium WSH-002]
Length = 315
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 77/137 (56%), Gaps = 9/137 (6%)
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSA 173
Y +S + +G P GKTT++R++ARV+S ++ +V IVD +EI G +P
Sbjct: 136 YWQSTVIIGPPQTGKTTMIRDLARVISTGIERSKIPPFKVGIVDERSEIAGAVKGVPQHT 195
Query: 174 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
G+ RM + + + + M+ + + P+V+IVDE+G+E + A GV +I T H
Sbjct: 196 FGS--RMDLLDSCPKAEGMMMMIRSMSPDVLIVDEVGSEEDCKAVLEAVNAGVRVIMTVH 253
Query: 234 GEWLENIIKNPILSDLI 250
G +++++K P L L+
Sbjct: 254 GYDIDDLMKRPTLQALM 270
>gi|149183869|ref|ZP_01862262.1| stage III sporulation protein AA [Bacillus sp. SG-1]
gi|148848430|gb|EDL62687.1| stage III sporulation protein AA [Bacillus sp. SG-1]
Length = 309
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 91/192 (47%), Gaps = 21/192 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG--KSILF 127
G +R G+ G + ++ AIR + RV R G + L+ K +
Sbjct: 86 GGHRVGLAGKVILDGGKVKAIRH----LASFNIRVAREAIGIAAPLIPSLYKNRWKHTMI 141
Query: 128 VGRPGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+G P GKTT++R+IAR++S F + +V IVD +EI G +P G
Sbjct: 142 IGAPQTGKTTMLRDIARIVSTGFPEESIPIPPYKVGIVDERSEIAGCVHGVPQLQFGP-- 199
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + M+ + + P+VIIVDEIG + A G+ LI T HG LE
Sbjct: 200 RIDVLDACPKAEGMMMLIRSMSPDVIIVDEIGRREDGQAILEAVNAGITLIMTTHGHSLE 259
Query: 239 NIIKNPILSDLI 250
I K P L ++I
Sbjct: 260 EISKRPYLKEII 271
>gi|138895978|ref|YP_001126431.1| stage III sporulation protein AA [Geobacillus thermodenitrificans
NG80-2]
gi|196248870|ref|ZP_03147570.1| stage III sporulation protein AA [Geobacillus sp. G11MC16]
gi|134267491|gb|ABO67686.1| Stage III sporulation protein AA [Geobacillus thermodenitrificans
NG80-2]
gi|196211746|gb|EDY06505.1| stage III sporulation protein AA [Geobacillus sp. G11MC16]
Length = 306
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 96/188 (51%), Gaps = 17/188 (9%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILF 127
G +R G+ G + ++ AIR + R+ + G D + ++ G+ +
Sbjct: 85 GGHRVGLAGKVITEGGKVKAIRD----VASFNIRIAKEQVGIADPLIPYVYDGRWCHTMI 140
Query: 128 VGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQV 182
+G P GKTT++R++AR++S ++ +V IVD +EI G IP + G R+ V
Sbjct: 141 IGSPQTGKTTLLRDVARLISSGTERIPAQKVAIVDERSEIAGCVKGIPQFSFGP--RLDV 198
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + + M+ + + P+VIIVDEIG E ++ A A GV + T HG ++++ +
Sbjct: 199 LDACPKAEGMMMMIRSMSPDVIIVDEIGREEDSEAVLEAANAGVSVWTTVHGRSIKDVQQ 258
Query: 243 NPILSDLI 250
P L ++
Sbjct: 259 RPTLGSVM 266
>gi|289578279|ref|YP_003476906.1| stage III sporulation protein AA [Thermoanaerobacter italicus Ab9]
gi|289527992|gb|ADD02344.1| stage III sporulation protein AA [Thermoanaerobacter italicus Ab9]
Length = 332
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 73/134 (54%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 176
+IL + P GKTT++R+IAR +S+ K+V IVD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDIARWISNGIDFLGFTGKKVGIVDERSEIAGCYNGIPQLDVGI 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + MI + + P+V++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAHGMIMLIRSMSPQVVVTDEIGRKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 237 LENIIKNPILSDLI 250
+E+++K PIL D+I
Sbjct: 276 IEDLMKKPILKDVI 289
>gi|220931461|ref|YP_002508369.1| Sporulation stage III protein AA [Halothermothrix orenii H 168]
gi|219992771|gb|ACL69374.1| Sporulation stage III protein AA [Halothermothrix orenii H 168]
Length = 316
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 14/149 (9%)
Query: 112 IDMVYDL---LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
I +YD ++Y + + V P GKTT++R+I R++S+ +K +V +VD +E
Sbjct: 140 IKQIYDFKNRVYY--NTMIVSPPLCGKTTLLRDIVRLISNGIKKYGIPGKKVGVVDERSE 197
Query: 163 IGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
IGG + IP + IG+ R + + + K + V + PEVI VDEIG E + A +
Sbjct: 198 IGGAYNGIPGNRIGS--RTDLLDNCPKAKGISLLVRSMSPEVIAVDEIGNEEDVIAIQEA 255
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV LI TAHGE L + P ++ L+
Sbjct: 256 TNSGVSLIATAHGENLTTLKMRPAMARLM 284
>gi|225025911|ref|ZP_03715103.1| hypothetical protein EUBHAL_00147 [Eubacterium hallii DSM 3353]
gi|224956697|gb|EEG37906.1| putative stage III sporulation protein AA [Eubacterium hallii DSM
3353]
Length = 320
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 84/186 (45%), Gaps = 12/186 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGR 130
G +RAG+ G + + + I + RV R V G + + L G + L +
Sbjct: 107 GGHRAGLCGKYYYRGEEKPQIKHISSINLRVAREVIGCAECIVPKLFEGNTFCHTLLISP 166
Query: 131 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGDIPHSAIG--TARRMQVPE 184
PG GKTT +R+I R+LSD K V +VD +EIG IG R + +
Sbjct: 167 PGCGKTTYLRDIIRLLSDGTDTITGKNVAVVDERSEIGNR---TREGIGFYLGNRTDLMD 223
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ M+ + PE++ DEIG E + A + G L+ T HG +++I P
Sbjct: 224 HCPKAAGMLMMLRTMTPEILAADEIGGEKDIKAMAYVRNCGCRLLMTVHGNSMQDIFARP 283
Query: 245 ILSDLI 250
+L + +
Sbjct: 284 VLGEYL 289
>gi|168215461|ref|ZP_02641086.1| stage III sporulation protein AA [Clostridium perfringens NCTC
8239]
gi|182382302|gb|EDT79781.1| stage III sporulation protein AA [Clostridium perfringens NCTC
8239]
Length = 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL---HYGKSIL 126
G +R G+ G + I IR+ I L RV R + G + + + L + + L
Sbjct: 84 GGHRVGLAGQCVIEDNSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTL 139
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I R +S+ KR V++D +EI + IP +G R
Sbjct: 140 IISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--R 197
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 198 TDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEE 257
Query: 240 IIKNPILSDLI 250
+ + P+ +++
Sbjct: 258 LYRRPVFREIV 268
>gi|422874752|ref|ZP_16921237.1| stage III sporulation protein AA [Clostridium perfringens F262]
gi|380304393|gb|EIA16682.1| stage III sporulation protein AA [Clostridium perfringens F262]
Length = 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL---HYGKSIL 126
G +R G+ G + I IR+ I L RV R + G + + + L + + L
Sbjct: 84 GGHRVGLAGQCVIEDNSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTL 139
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I R +S+ KR V++D +EI + IP +G R
Sbjct: 140 IISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--R 197
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 198 TDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEE 257
Query: 240 IIKNPILSDLI 250
+ + P+ +++
Sbjct: 258 LYRRPVFREIV 268
>gi|110800786|ref|YP_696516.1| stage III sporulation protein AA [Clostridium perfringens ATCC
13124]
gi|168206113|ref|ZP_02632118.1| stage III sporulation protein AA [Clostridium perfringens E str.
JGS1987]
gi|168210804|ref|ZP_02636429.1| stage III sporulation protein AA [Clostridium perfringens B str.
ATCC 3626]
gi|169343721|ref|ZP_02864720.1| stage III sporulation protein AA [Clostridium perfringens C str.
JGS1495]
gi|182625637|ref|ZP_02953406.1| stage III sporulation protein AA [Clostridium perfringens D str.
JGS1721]
gi|422346502|ref|ZP_16427416.1| stage III sporulation protein AA [Clostridium perfringens
WAL-14572]
gi|110675433|gb|ABG84420.1| stage III sporulation protein AA [Clostridium perfringens ATCC
13124]
gi|169298281|gb|EDS80371.1| stage III sporulation protein AA [Clostridium perfringens C str.
JGS1495]
gi|170662470|gb|EDT15153.1| stage III sporulation protein AA [Clostridium perfringens E str.
JGS1987]
gi|170711143|gb|EDT23325.1| stage III sporulation protein AA [Clostridium perfringens B str.
ATCC 3626]
gi|177909039|gb|EDT71514.1| stage III sporulation protein AA [Clostridium perfringens D str.
JGS1721]
gi|373226047|gb|EHP48374.1| stage III sporulation protein AA [Clostridium perfringens
WAL-14572]
Length = 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL---HYGKSIL 126
G +R G+ G + I IR+ I L RV R + G + + + L + + L
Sbjct: 84 GGHRVGLAGQCVIEDNSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTL 139
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I R +S+ KR V++D +EI + IP +G R
Sbjct: 140 IISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--R 197
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 198 TDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEE 257
Query: 240 IIKNPILSDLI 250
+ + P+ +++
Sbjct: 258 LYRRPVFREIV 268
>gi|110801582|ref|YP_699116.1| stage III sporulation protein AA [Clostridium perfringens SM101]
gi|110682083|gb|ABG85453.1| stage III sporulation protein AA [Clostridium perfringens SM101]
Length = 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL---HYGKSIL 126
G +R G+ G + I IR+ I L RV R + G + + + L + + L
Sbjct: 84 GGHRVGLAGQCVIEDNSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTL 139
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I R +S+ KR V++D +EI + IP +G R
Sbjct: 140 IISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--R 197
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 198 TDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEE 257
Query: 240 IIKNPILSDLI 250
+ + P+ +++
Sbjct: 258 LYRRPVFREIV 268
>gi|410453700|ref|ZP_11307645.1| stage III sporulation protein AA [Bacillus bataviensis LMG 21833]
gi|409932914|gb|EKN69868.1| stage III sporulation protein AA [Bacillus bataviensis LMG 21833]
Length = 308
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 93/192 (48%), Gaps = 19/192 (9%)
Query: 72 FGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG--KSI 125
G +R G+ G + ++ AIR I R+ R G + + ++ G
Sbjct: 84 ISGGHRIGLAGKVILEDGKVKAIRD----ISSFNIRIAREKVGIAEPIVPFIYKGIWMHT 139
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ +G P GKTT++R+IAR++S + +V +VD +EI G +P G
Sbjct: 140 MIIGPPQTGKTTLLRDIARIISTGNRAGGIQAYKVGVVDERSEIAGCVHGVPQLTFG--H 197
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + M+ + + P+V+IVDEIG + +A A G+ LI T HG +E
Sbjct: 198 RLDVLDACPKAEGMMMLIRSMSPDVLIVDEIGRKEDAEAILEAVHAGIKLIMTTHGTSIE 257
Query: 239 NIIKNPILSDLI 250
+ K P L DLI
Sbjct: 258 ELRKRPSLRDLI 269
>gi|18310815|ref|NP_562749.1| stage III sporulation protein AA [Clostridium perfringens str. 13]
gi|18145497|dbj|BAB81539.1| stage III sporulation protein AA [Clostridium perfringens str. 13]
Length = 294
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL---HYGKSIL 126
G +R G+ G + I IR+ I L RV R + G + + + L + + L
Sbjct: 84 GGHRVGLAGQCVIEDNSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTL 139
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I R +S+ KR V++D +EI + IP +G R
Sbjct: 140 IISPPKCGKTTLLRDITRNISNGISQIGLKGKRTVVIDERSEIAACYNGIPQMNVGM--R 197
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 198 TDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEE 257
Query: 240 IIKNPILSDLI 250
+ + P+ +++
Sbjct: 258 LYRRPVFREIV 268
>gi|319651504|ref|ZP_08005632.1| stage III sporulation protein AA [Bacillus sp. 2_A_57_CT2]
gi|317396819|gb|EFV77529.1| stage III sporulation protein AA [Bacillus sp. 2_A_57_CT2]
Length = 307
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGDGD-IPHSAIGTAR 178
+ +G P GKTT++R+IAR++S D +V IVD +EI G + IP G
Sbjct: 140 MIIGPPQTGKTTLLRDIARIISSGDPNNDFPASKVGIVDERSEIAGCVNGIPQMTFGN-- 197
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + M+ + + PEV++VDEIG +A A G+ LI T HG LE
Sbjct: 198 RIDVLDACPKAEGMMMMIRSMSPEVLVVDEIGRHEDAEAIMEAVNAGIKLIMTTHGNSLE 257
Query: 239 NIIKNPILSDLI 250
I K P L ++
Sbjct: 258 EIKKRPTLKAIL 269
>gi|167037501|ref|YP_001665079.1| ATPase AAA [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|320115915|ref|YP_004186074.1| stage III sporulation protein AA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
gi|166856335|gb|ABY94743.1| AAA ATPase [Thermoanaerobacter pseudethanolicus ATCC 33223]
gi|319929006|gb|ADV79691.1| stage III sporulation protein AA [Thermoanaerobacter brockii subsp.
finnii Ako-1]
Length = 332
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 176
+IL + P GKTT++R+I R +S+ K+V +VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGI 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 237 LENIIKNPILSDLI 250
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|153810487|ref|ZP_01963155.1| hypothetical protein RUMOBE_00868 [Ruminococcus obeum ATCC 29174]
gi|149833666|gb|EDM88747.1| stage III sporulation protein AA [Ruminococcus obeum ATCC 29174]
Length = 251
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 13/209 (6%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ + E E Q + GG +R GI G + IR K I + R+ V
Sbjct: 15 EYISGYSLYAYEDEICQGYLSVQGG-HRVGITGKVILDGEHIRGMK-YISCINVRLAHQV 72
Query: 109 SGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLS---DEFQKRVV-IVDTSN 161
G D V + G+ + L + P GKTT++R++ R +S D Q + V +VD +
Sbjct: 73 QGCADEVLPYIRNGEQVYHTLIIAPPRCGKTTLLRDMIRQISNGTDRIQGKTVGVVDERS 132
Query: 162 EIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 220
E+ G IP + +G R V + + K M + + P+V+ VDE+G + + A S
Sbjct: 133 ELAGCYQGIPQNDLGM--RTDVLDACPKAKGMQMLLRSMSPDVVAVDELGKKEDFKAVES 190
Query: 221 IAERGVMLIGTAHGEWLENIIKNPILSDL 249
+ G L TAHG LE+I++ P L
Sbjct: 191 VVHCGCKLFATAHGNSLEDILRQPFFQKL 219
>gi|167040163|ref|YP_001663148.1| ATPase AAA [Thermoanaerobacter sp. X514]
gi|300914246|ref|ZP_07131562.1| stage III sporulation protein AA [Thermoanaerobacter sp. X561]
gi|307724518|ref|YP_003904269.1| stage III sporulation protein AA [Thermoanaerobacter sp. X513]
gi|166854403|gb|ABY92812.1| AAA ATPase [Thermoanaerobacter sp. X514]
gi|300889181|gb|EFK84327.1| stage III sporulation protein AA [Thermoanaerobacter sp. X561]
gi|307581579|gb|ADN54978.1| stage III sporulation protein AA [Thermoanaerobacter sp. X513]
Length = 332
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 176
+IL + P GKTT++R+I R +S+ K+V +VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGL 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 237 LENIIKNPILSDLI 250
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|288553343|ref|YP_003425278.1| stage III sporulation protein AA [Bacillus pseudofirmus OF4]
gi|288544503|gb|ADC48386.1| stage III sporulation protein AA [Bacillus pseudofirmus OF4]
Length = 319
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/190 (29%), Positives = 96/190 (50%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEG--TLHR--ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILF 127
G +R G+ G L R + IR + R+ R G D + L + + LF
Sbjct: 93 GGHRVGLAGKVILERGEVKTIRD----VSSFNIRIARQSIGMADRLIHYLFENRWLNTLF 148
Query: 128 VGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGDG-DIPHSAIGTARRM 180
+G P GKTT++R++AR++S+ +KR V I+D +EI +P +G R+
Sbjct: 149 IGPPQTGKTTILRDVARLISEGDEKRGIAPLKVGIIDERSEICASMRGVPQHQLGP--RI 206
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+V+IVDEIG + A + GV +I T HG ++++
Sbjct: 207 DVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRVEDVLAVQEAVHAGVGVITTVHGHTIDDV 266
Query: 241 IKNPILSDLI 250
+K P L +L+
Sbjct: 267 LKRPALKELM 276
>gi|392955288|ref|ZP_10320831.1| stage III sporulation protein AA [Bacillus macauensis ZFHKF-1]
gi|391878760|gb|EIT87337.1| stage III sporulation protein AA [Bacillus macauensis ZFHKF-1]
Length = 308
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 94/190 (49%), Gaps = 20/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK---SIL 126
G +R G+ G + + AIR I RV R V G + + L + L
Sbjct: 90 GGHRIGLAGKVITERGEVKAIRD----IGSFNIRVARQVIGSAEPLRAALCDNNRWLNTL 145
Query: 127 FVGRPGVGKTTVMREIARVLS--DE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARR 179
+G P GKTT++R++AR++S DE ++V IVD +EI G IP +G+ R
Sbjct: 146 IIGAPQTGKTTLLRDLARLISVGDEQTRISSRKVGIVDERSEIAGSVRGIPQFELGS--R 203
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
+ V + + + M+ + + PE++IVDEIG + + A GV LI TAHG L+
Sbjct: 204 VDVLDACPKAEGMMMLIRSMSPEILIVDEIGRKEDVEAMIEAMHAGVGLIATAHGYSLQE 263
Query: 240 IIKNPILSDL 249
+K P L L
Sbjct: 264 AMKRPALEAL 273
>gi|291520786|emb|CBK79079.1| stage III sporulation protein AA [Coprococcus catus GD/7]
Length = 351
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 99/208 (47%), Gaps = 13/208 (6%)
Query: 51 YLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVS 109
YL + E E Q + GG +R GI G L + IRS + I L R+ V
Sbjct: 78 YLSHYSIYAYEEEIRQGFLTIQGG-HRVGIAGKVLSDGNGIRSIR-PITFLNVRLAHEVR 135
Query: 110 GHIDMVYDLLHY-GK--SILFVGRPGVGKTTVMREIARVLSD----EFQKRVVIVDTSNE 162
G D + L+ G+ S L + PG GKTT++R++ R S+ E +RV +VD +E
Sbjct: 136 GCADELMPWLYEEGRPCSTLILSPPGCGKTTMLRDVIRQFSNGCGQEAGRRVGVVDERSE 195
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I IP + +G R V + +H M + + PE++ VDEIG+ + A ++
Sbjct: 196 IAACYRGIPQNDMGI--RTDVLDGCAKHMGMQMMLRSMTPEILAVDEIGSRTDKEAIDAV 253
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDL 249
G L+ TAHG +E + P L +
Sbjct: 254 MNCGCCLLATAHGASMEKMQMRPALRQM 281
>gi|256752877|ref|ZP_05493715.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus
CCSD1]
gi|256748254|gb|EEU61320.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus
CCSD1]
Length = 332
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 72/134 (53%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 176
+IL + P GKTT++R+I R +S+ K+V +VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGVVDERSEIAGCYNGIPQMDVGL 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 237 LENIIKNPILSDLI 250
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|168214407|ref|ZP_02640032.1| stage III sporulation protein AA [Clostridium perfringens CPE str.
F4969]
gi|170714158|gb|EDT26340.1| stage III sporulation protein AA [Clostridium perfringens CPE str.
F4969]
Length = 294
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 91/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL---HYGKSIL 126
G +R G+ G + I IR+ I L RV R + G + + + L + + L
Sbjct: 84 GGHRVGLAGQCVIEDNSIKTIRN----ITSLNIRVCREIVGCSNSLMNSLVENNRVNNTL 139
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I R +S+ KR V++D +EI + IP +G R
Sbjct: 140 IISPPKCGKTTLLRDITRNISNGISQIGFKGKRTVVIDERSEIAACYNGIPQMNVGM--R 197
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + ++ + M+ AV PEVII DEIGT + GV +I T HG +E
Sbjct: 198 TDVYDNCIKSEGMMMAVRGLSPEVIICDEIGTYKDMEGLMMAYNSGVSIIATLHGRNVEE 257
Query: 240 IIKNPILSDLI 250
+ + P+ +++
Sbjct: 258 LYRRPVFREIM 268
>gi|206976251|ref|ZP_03237159.1| stage III sporulation protein AA [Bacillus cereus H3081.97]
gi|217961683|ref|YP_002340253.1| stage III sporulation protein AA [Bacillus cereus AH187]
gi|222097640|ref|YP_002531697.1| stage III sporulation protein aa [Bacillus cereus Q1]
gi|229140927|ref|ZP_04269471.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST26]
gi|229198320|ref|ZP_04325027.1| Stage III sporulation protein AA [Bacillus cereus m1293]
gi|375286201|ref|YP_005106640.1| stage III sporulation protein AA [Bacillus cereus NC7401]
gi|402555673|ref|YP_006596944.1| stage III sporulation protein AA [Bacillus cereus FRI-35]
gi|423354691|ref|ZP_17332316.1| stage III sporulation protein AA [Bacillus cereus IS075]
gi|423373988|ref|ZP_17351327.1| stage III sporulation protein AA [Bacillus cereus AND1407]
gi|423566844|ref|ZP_17543091.1| stage III sporulation protein AA [Bacillus cereus MSX-A12]
gi|423574120|ref|ZP_17550239.1| stage III sporulation protein AA [Bacillus cereus MSX-D12]
gi|206745447|gb|EDZ56846.1| stage III sporulation protein AA [Bacillus cereus H3081.97]
gi|217064201|gb|ACJ78451.1| stage III sporulation protein AA [Bacillus cereus AH187]
gi|221241698|gb|ACM14408.1| stage III sporulation protein AA [Bacillus cereus Q1]
gi|228585199|gb|EEK43310.1| Stage III sporulation protein AA [Bacillus cereus m1293]
gi|228642503|gb|EEK98790.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST26]
gi|358354728|dbj|BAL19900.1| stage III sporulation protein AA [Bacillus cereus NC7401]
gi|401086239|gb|EJP94466.1| stage III sporulation protein AA [Bacillus cereus IS075]
gi|401094803|gb|EJQ02873.1| stage III sporulation protein AA [Bacillus cereus AND1407]
gi|401212689|gb|EJR19432.1| stage III sporulation protein AA [Bacillus cereus MSX-D12]
gi|401215359|gb|EJR22076.1| stage III sporulation protein AA [Bacillus cereus MSX-A12]
gi|401796883|gb|AFQ10742.1| stage III sporulation protein AA [Bacillus cereus FRI-35]
Length = 308
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ ++N + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVENCKQYDALEEIRVRIGRPLECIAQGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ F G +R G+ G + + + R+ R G
Sbjct: 63 LSHFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423604153|ref|ZP_17580046.1| stage III sporulation protein AA [Bacillus cereus VD102]
gi|401245839|gb|EJR52192.1| stage III sporulation protein AA [Bacillus cereus VD102]
Length = 308
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ ++N + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVENCKQYDALEEIRVRIGRPLECIAQGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ F G +R G+ G + + + R+ R G
Sbjct: 63 LSHFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423622719|ref|ZP_17598497.1| stage III sporulation protein AA [Bacillus cereus VD148]
gi|401260839|gb|EJR67007.1| stage III sporulation protein AA [Bacillus cereus VD148]
Length = 308
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 63/267 (23%), Positives = 119/267 (44%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + + E+ Y +
Sbjct: 6 EVLPKMMKQLVESCKQYNTLEEIRVRIGRPLECIAHGEV---FFYDYIATAEDASYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ +F G +R G+ G + +I + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSIVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+V+IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|160934305|ref|ZP_02081692.1| hypothetical protein CLOLEP_03176 [Clostridium leptum DSM 753]
gi|156866978|gb|EDO60350.1| putative stage III sporulation protein AA [Clostridium leptum DSM
753]
Length = 336
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/177 (33%), Positives = 89/177 (50%), Gaps = 14/177 (7%)
Query: 72 FGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHID-MVYDLLHYGKSIL 126
G +R G+ GT +R+S IR I L R+ R V G D ++ +L +L
Sbjct: 109 MAGGHRVGVCGTAVYEENRVSGIRD----ISSLNIRIAREVYGAADELLRELDKEISGLL 164
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 185
G P GKTT++R++AR LS + K+VV++D E+GG I + +G + V
Sbjct: 165 IAGPPSSGKTTILRDLARQLSIK-GKKVVVIDERGELGGAFQGICQNDLGLS---DVLTG 220
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + +++AV PE+II DE G+ EA A GV LI T H LE I +
Sbjct: 221 FPKGEGILQAVRCLSPELIICDEAGSRQEAAAIEEGLNAGVGLITTLHAGSLEEIYR 277
>gi|160938291|ref|ZP_02085646.1| hypothetical protein CLOBOL_03187 [Clostridium bolteae ATCC
BAA-613]
gi|158438664|gb|EDP16421.1| hypothetical protein CLOBOL_03187 [Clostridium bolteae ATCC
BAA-613]
Length = 357
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 63/217 (29%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ S V E E Q + GG +R G+ G T+ IR K +I + RV +
Sbjct: 100 EYMCSFSVYAAEEELRQGFITIQGG-HRIGVAGRTMAFGQDIRLMK-SISFINIRVAHQI 157
Query: 109 SGHIDMVYDLLHYGK----SILFVGRPGVGKTTVMREIARVLSDEFQKR----------V 154
G + V D L+ + L + P GKTT++R++ R +SD + + V
Sbjct: 158 QGCANQVMDYLYSDDGRFLNTLVISPPRCGKTTLLRDMIRQVSDGPRTQRSGRRITGVSV 217
Query: 155 VIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEA 213
+VD +E+G +P + +G R V + + + M+ V + P+VI VDEIG+
Sbjct: 218 GVVDERSELGACYQGVPQNDLGM--RTDVLDCCPKSQGMMMLVRSMAPQVIAVDEIGSRE 275
Query: 214 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ A + G L T HG LE+I++ P + +LI
Sbjct: 276 DVQAIEYVRNCGCSLAATIHGSSLEDIMQKPAVGELI 312
>gi|345017586|ref|YP_004819939.1| stage III sporulation protein AA [Thermoanaerobacter wiegelii
Rt8.B1]
gi|344032929|gb|AEM78655.1| stage III sporulation protein AA [Thermoanaerobacter wiegelii
Rt8.B1]
Length = 332
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 176
+IL + P GKTT++R+I R +S+ K+V VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 237 LENIIKNPILSDLI 250
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|403744996|ref|ZP_10954024.1| stage III sporulation protein AA [Alicyclobacillus hesperidum
URH17-3-68]
gi|403121651|gb|EJY55928.1| stage III sporulation protein AA [Alicyclobacillus hesperidum
URH17-3-68]
Length = 347
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 81/285 (28%), Positives = 125/285 (43%), Gaps = 51/285 (17%)
Query: 10 ILPSDLRDRLQ--NDSKRGQLLEVILDLGRLPEAR------YLGEFGGKYLRSTEVSV-- 59
+LP DL+ L +D+ +L EV L +G+ E R YL + GG L +V
Sbjct: 38 VLPVDLQRLLLALDDTILAELEEVRLRIGQPIELRFGVNSQYLKQGGGLTLMPPAAAVLS 97
Query: 60 -EELEYAQSAVGEFG----------------GDNRAGIEGTL----HRISAIRSRKGAIV 98
LE+ V +F G +R G+ G + I +IRS I
Sbjct: 98 QAALEHVMQQVTQFSLYAVEEELRKGFITLPGGHRIGVAGRIVTDGGHIRSIRS----IS 153
Query: 99 GLTCRVGRAVSGHIDMVYDLLH-----YGKSILFVGRPGVGKTTVMREIARVLSDEFQKR 153
L R+ RA G + L + S L + P GKTT++R+IAR S+ R
Sbjct: 154 SLNIRIARAHPGMATPLRPWLADRGDGHPLSTLVISPPQCGKTTLVRDIARQWSENLVTR 213
Query: 154 ------VVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
VVI+D +EI G +G P A+G R V + + + ++ A+ + P++++
Sbjct: 214 RRSPSKVVIIDERSEIAGMFEGR-PQFALGP--RTDVLDGCPKAEGLLMAIRSLSPDIVV 270
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
DEIG + A A GV +I TAH L + + P + +L
Sbjct: 271 TDEIGKHGDVEAILEAANAGVAVITTAHASSLASWRRRPHMEELF 315
>gi|326390193|ref|ZP_08211754.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus JW
200]
gi|325993841|gb|EGD52272.1| stage III sporulation protein AA [Thermoanaerobacter ethanolicus JW
200]
Length = 332
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 176
+IL + P GKTT++R+I R +S+ K+V VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 237 LENIIKNPILSDLI 250
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|358062401|ref|ZP_09149047.1| stage III sporulation protein AA [Clostridium hathewayi WAL-18680]
gi|356699530|gb|EHI61044.1| stage III sporulation protein AA [Clostridium hathewayi WAL-18680]
Length = 320
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 99/210 (47%), Gaps = 13/210 (6%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ + E E Q + GG +R GI G T+ IRS K + + R+ V
Sbjct: 77 EYISHYSLYAYEEEMKQGFITIQGG-HRIGIAGKTIVDDKGIRSMK-YVSFINVRLSHQV 134
Query: 109 SGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSN 161
G V L++G I L + P GKTT++R++ R +S+ K V ++D +
Sbjct: 135 KGCASAVLPYLYHGGDIFHTLVISPPRCGKTTLLRDMIRQISNGTGKEPGMTVGVIDERS 194
Query: 162 EIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 220
EIG +P + +G R + + + + M+ + P VI VDEIG+ + A
Sbjct: 195 EIGACYQGVPQNELGI--RTDILDCCPKARGMMMLIRTMSPRVIAVDEIGSREDLEAMEY 252
Query: 221 IAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ G LI T HG +E+I + P+L L+
Sbjct: 253 VMNCGCKLIATVHGNSVEDIKQKPVLRKLV 282
>gi|239627516|ref|ZP_04670547.1| stage III sporulation protein AA [Clostridiales bacterium
1_7_47_FAA]
gi|239517662|gb|EEQ57528.1| stage III sporulation protein AA [Clostridiales bacterium
1_7_47FAA]
Length = 332
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 17/214 (7%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ S + E E Q + GG +R G+ G TL + IR K I + RV V
Sbjct: 82 EYMGSFSLYAAEEELRQGFLTIQGG-HRIGVAGRTLVQGQDIRLMK-FISFINIRVAHQV 139
Query: 109 SGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKR---------VVIV 157
G D V D L+ G+ + L + P GKTT++R+I R +SD + V +V
Sbjct: 140 PGCADGVMDFLYDGRFLNTLVISPPRCGKTTLLRDIIRQVSDGWVGHSGDRVPGVSVGVV 199
Query: 158 DTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
D +E+ +P + +G R V + + + M+ V P VI VDEIG+ +A
Sbjct: 200 DERSELAACYQGVPQNDLGM--RTDVLDCCPKSQGMMMLVRTMAPGVIAVDEIGSRQDAE 257
Query: 217 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A + G L T HG LE+I + P + L+
Sbjct: 258 AIEYVRNCGCALAATIHGSSLEDIRQKPSMGGLL 291
>gi|392941068|ref|ZP_10306712.1| LOW QUALITY PROTEIN: stage III sporulation protein AA
[Thermoanaerobacter siderophilus SR4]
gi|392292818|gb|EIW01262.1| LOW QUALITY PROTEIN: stage III sporulation protein AA
[Thermoanaerobacter siderophilus SR4]
Length = 332
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGT 176
+IL + P GKTT++R+I R +S+ K+V VD +EI G + IP +G
Sbjct: 158 NILIISPPQCGKTTLLRDITRWISNGIDFLGFKGKKVGAVDERSEIAGCYNGIPQMDVGI 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + MI + + PEV++ DEIG + + A + GV +I T H
Sbjct: 218 --RTDVLDGCPKAYGMIMLIRSMSPEVVVTDEIGKKEDIEAIHEVLNTGVKIITTVHAND 275
Query: 237 LENIIKNPILSDLI 250
+E+++K P+L D+I
Sbjct: 276 IEDLMKKPVLKDVI 289
>gi|182417972|ref|ZP_02949280.1| stage III sporulation protein AA [Clostridium butyricum 5521]
gi|237668875|ref|ZP_04528859.1| stage III sporulation protein AA [Clostridium butyricum E4 str.
BoNT E BL5262]
gi|182378143|gb|EDT75678.1| stage III sporulation protein AA [Clostridium butyricum 5521]
gi|237657223|gb|EEP54779.1| stage III sporulation protein AA [Clostridium butyricum E4 str.
BoNT E BL5262]
Length = 308
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/193 (27%), Positives = 95/193 (49%), Gaps = 22/193 (11%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK-----S 124
G +R GI G + IR+ I + RV V G D + ++ K +
Sbjct: 87 GGHRIGIAGECVMEKGEVKTIRN----ISSINIRVCSEVIGCSDKLIKYIYSQKENRIFN 142
Query: 125 ILFVGRPGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGG-DGDIPHSAIGTA 177
+ + P GKTT++R+IAR +S+ + ++V ++D +EIG IP + +G
Sbjct: 143 TIIISPPKCGKTTILRDIARNISNGMNSIGLYGRKVAVIDERSEIGACHFGIPQNDLGM- 201
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
R + + L+ + MI A+ + PE++I DEIGT+ + A GV +I + HG +
Sbjct: 202 -RTDILDNCLKKEGMIMAIRSLSPEILICDEIGTKGDVEALLMAFNSGVNIITSIHGFTI 260
Query: 238 ENIIKNPILSDLI 250
E++ K + +L+
Sbjct: 261 EDLYKRKVFHELL 273
>gi|293115588|ref|ZP_05792179.2| stage III sporulation protein AA [Butyrivibrio crossotus DSM 2876]
gi|292808949|gb|EFF68154.1| stage III sporulation protein AA [Butyrivibrio crossotus DSM 2876]
Length = 303
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/250 (25%), Positives = 115/250 (46%), Gaps = 26/250 (10%)
Query: 11 LPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE--FGGKYLRSTEVSVEEL-----E 63
LP D+++ ++ S + ++ E+ L + R E ++ F K + T+ +++E+
Sbjct: 20 LPKDIKNVIETHSDKDKITEIRLRINRPLEVKFRCSCCFIDKII-VTKTTIKEIMDKICN 78
Query: 64 YAQSAVGE--------FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMV 115
Y+ A + G NR GI G + + I L RV + G +
Sbjct: 79 YSLYAYEDDIKRGFITVKGGNRVGICGKAVIENGHVTTLKNISSLNIRVANEIKGCGEQY 138
Query: 116 YDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQKR---VVIVDTSNEIGG-DGD 168
+ SI + V PG GKTT++R+I R+LSD + R + ++D NEI D
Sbjct: 139 IKYITDNNSICNTIIVSPPGCGKTTLLRDIIRLLSDGYGNRGFNISVIDERNEISATDLG 198
Query: 169 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 228
IP + +G + + + + +I A+ + PE+I VDEIG++ + + G +
Sbjct: 199 IPENDVGMRTDVMINNKT---EGIIMALRSMAPEIIAVDEIGSDKDINVLNKAITCGCKI 255
Query: 229 IGTAHGEWLE 238
+ + H + LE
Sbjct: 256 LASIHADNLE 265
>gi|423470413|ref|ZP_17447157.1| stage III sporulation protein AA [Bacillus cereus BAG6O-2]
gi|423558227|ref|ZP_17534529.1| stage III sporulation protein AA [Bacillus cereus MC67]
gi|401191495|gb|EJQ98517.1| stage III sporulation protein AA [Bacillus cereus MC67]
gi|402436542|gb|EJV68572.1| stage III sporulation protein AA [Bacillus cereus BAG6O-2]
Length = 308
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 67/265 (25%), Positives = 122/265 (46%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP +R ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMRQLVEGCKQYDALEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP GT R+ V + + + M+ + + P+V+IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|229031842|ref|ZP_04187830.1| Stage III sporulation protein AA [Bacillus cereus AH1271]
gi|228729460|gb|EEL80449.1| Stage III sporulation protein AA [Bacillus cereus AH1271]
Length = 308
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQYDALEEIRVRIGRPLECIAHGEV---FFYDYVVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASNIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|229104823|ref|ZP_04235483.1| Stage III sporulation protein AA [Bacillus cereus Rock3-28]
gi|228678540|gb|EEL32757.1| Stage III sporulation protein AA [Bacillus cereus Rock3-28]
Length = 308
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + + E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQYNTLEEIRVRIGRPLECIAHGEV---FFYDYIATAEDASYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ +F G +R G+ G + + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+V+IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|291550239|emb|CBL26501.1| stage III sporulation protein AA [Ruminococcus torques L2-14]
Length = 314
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 100/215 (46%), Gaps = 12/215 (5%)
Query: 44 LGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCR 103
+GE G Y+ + E E Q + GG +R G+ G + + I L R
Sbjct: 70 IGETMG-YICHYSLYAYENELKQGFITVEGG-HRVGVAGKVIIENEKVKNIQYISSLNVR 127
Query: 104 VGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSD--EFQK--RVVI 156
+ V G D + + K I L + P GKTT++R++ R +SD E+ K V +
Sbjct: 128 ISHEVLGCADALIPYITENKQICHTLIISPPCCGKTTLIRDLIRQISDGNEYIKGCSVGV 187
Query: 157 VDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 215
VD +E+GG I + +GT R + + + + MI + + P VI VDEIGT +
Sbjct: 188 VDERSELGGCYLGIAQNHLGT--RTDILDCCPKAEGMIMLIRSMAPRVIAVDEIGTSEDI 245
Query: 216 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
HA + G LI + H ++ K PIL DLI
Sbjct: 246 HAIEYAMQCGCRLIASVHSLDMDEASKKPILGDLI 280
>gi|52141303|ref|YP_085526.1| stage III sporulation protein AA [Bacillus cereus E33L]
gi|118479384|ref|YP_896535.1| stage III sporulation protein AA [Bacillus thuringiensis str. Al
Hakam]
gi|196046314|ref|ZP_03113540.1| stage III sporulation protein AA [Bacillus cereus 03BB108]
gi|225866175|ref|YP_002751553.1| stage III sporulation protein AA [Bacillus cereus 03BB102]
gi|229186436|ref|ZP_04313600.1| Stage III sporulation protein AA [Bacillus cereus BGSC 6E1]
gi|301055686|ref|YP_003793897.1| stage III sporulation protein AA [Bacillus cereus biovar anthracis
str. CI]
gi|376268091|ref|YP_005120803.1| Stage III sporulation protein AA [Bacillus cereus F837/76]
gi|51974772|gb|AAU16322.1| stage III sporulation protein AA [Bacillus cereus E33L]
gi|118418609|gb|ABK87028.1| stage III sporulation protein AA [Bacillus thuringiensis str. Al
Hakam]
gi|196022784|gb|EDX61465.1| stage III sporulation protein AA [Bacillus cereus 03BB108]
gi|225790306|gb|ACO30523.1| stage III sporulation protein AA [Bacillus cereus 03BB102]
gi|228597063|gb|EEK54719.1| Stage III sporulation protein AA [Bacillus cereus BGSC 6E1]
gi|300377855|gb|ADK06759.1| stage III sporulation protein AA [Bacillus cereus biovar anthracis
str. CI]
gi|364513891|gb|AEW57290.1| Stage III sporulation protein AA [Bacillus cereus F837/76]
Length = 308
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQYDALEEIRVRIGRPLECIAHGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|407706722|ref|YP_006830307.1| stage IV sporulation YqfD [Bacillus thuringiensis MC28]
gi|407384407|gb|AFU14908.1| Stage III sporulation protein AA [Bacillus thuringiensis MC28]
Length = 308
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + + E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQYNTLEEIRVRIGRPLECIAHGEV---FFYDYIATAEDASYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ +F G +R G+ G + + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+V+IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|229174870|ref|ZP_04302390.1| Stage III sporulation protein AA [Bacillus cereus MM3]
gi|228608538|gb|EEK65840.1| Stage III sporulation protein AA [Bacillus cereus MM3]
Length = 308
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQYDALEEIRVRIGRPLECIAHGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423550060|ref|ZP_17526387.1| stage III sporulation protein AA [Bacillus cereus ISP3191]
gi|401189676|gb|EJQ96726.1| stage III sporulation protein AA [Bacillus cereus ISP3191]
Length = 308
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQYDALEEIRVRIGRPLECIAHGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|225018840|ref|ZP_03708032.1| hypothetical protein CLOSTMETH_02790 [Clostridium methylpentosum
DSM 5476]
gi|224948400|gb|EEG29609.1| hypothetical protein CLOSTMETH_02790 [Clostridium methylpentosum
DSM 5476]
Length = 295
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 92/190 (48%), Gaps = 12/190 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRP 131
G +RAG+ GT S I + R+ R + G + + L+ GK L VG P
Sbjct: 92 GGHRAGLCGTAVYSRGEVSNMRNISSINLRIARQIKGSANELIRRLN-GKMGGTLLVGAP 150
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHK 190
GKTT++++I R + D ++ +VD+ E+ +P + +G A V + + +
Sbjct: 151 ASGKTTLLKDIVRQMPDH---KITVVDSRGELAACVCGVPQNDVGNA---DVLDGWQKAE 204
Query: 191 VMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL- 249
M+ A+ + P++I+ DEIG +A A GV LI TAH LE + K + D+
Sbjct: 205 GMMLAIRSMAPDIIVCDEIGDRRDAQAVECCMNAGVKLIATAHAGSLEELTKRRHIMDIL 264
Query: 250 -IGGVDTVTL 258
+G + + L
Sbjct: 265 SLGAFENIVL 274
>gi|153938479|ref|YP_001391217.1| stage III sporulation protein AA [Clostridium botulinum F str.
Langeland]
gi|384462236|ref|YP_005674831.1| stage III sporulation protein AA [Clostridium botulinum F str.
230613]
gi|152934375|gb|ABS39873.1| stage III sporulation protein AA [Clostridium botulinum F str.
Langeland]
gi|295319253|gb|ADF99630.1| stage III sporulation protein AA [Clostridium botulinum F str.
230613]
Length = 307
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 178
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVE 258
Query: 239 NIIKNPILSDLI 250
NI P+ +++
Sbjct: 259 NIYNRPVFKEIV 270
>gi|423395504|ref|ZP_17372705.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-1]
gi|423406380|ref|ZP_17383529.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-3]
gi|401654915|gb|EJS72454.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-1]
gi|401660374|gb|EJS77856.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-3]
Length = 308
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/269 (24%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKRLVEGCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASQIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG E+++K P L ++
Sbjct: 239 VHAGVQLFISAHGFSYEDVVKRPSLKAVL 267
>gi|196041563|ref|ZP_03108855.1| stage III sporulation protein AA [Bacillus cereus NVH0597-99]
gi|196027551|gb|EDX66166.1| stage III sporulation protein AA [Bacillus cereus NVH0597-99]
Length = 308
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 123/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQCDALEEIRVRIGRPLECIAHGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAILEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|42783312|ref|NP_980559.1| stage III sporulation protein AA [Bacillus cereus ATCC 10987]
gi|42739240|gb|AAS43167.1| stage III sporulation protein AA [Bacillus cereus ATCC 10987]
Length = 308
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ ++N + L E+ + +GR E GE + V+ ++ Y +
Sbjct: 6 EVLPKTMKQLVENCKQYDALEEIRVRIGRPLECIAHGEV---FFYDYIVTADDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ F G +R G+ G + + + R+ R G
Sbjct: 63 LSHFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|56420943|ref|YP_148261.1| stage III sporulation protein AA [Geobacillus kaustophilus HTA426]
gi|375009488|ref|YP_004983121.1| stage III sporulation protein AA [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|448238686|ref|YP_007402744.1| stage III sporulation protein [Geobacillus sp. GHH01]
gi|56380785|dbj|BAD76693.1| stage III sporulation protein AA [Geobacillus kaustophilus HTA426]
gi|359288337|gb|AEV20021.1| Stage III sporulation protein AA [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|445207528|gb|AGE22993.1| stage III sporulation protein [Geobacillus sp. GHH01]
Length = 306
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 126/271 (46%), Gaps = 32/271 (11%)
Query: 6 AFWQILPSDLRDRLQN---DSKRG---------QLLEVILD-LGRLPEARYLGEFGGKYL 52
A W ILP + LQ+ +RG + LEVI+D RL E G L
Sbjct: 3 AVWGILPKTVAAALQHHLPSCRRGIEEIRIRVSRPLEVIVDGTARLLPYEVTKEDGVHLL 62
Query: 53 -RSTEVSVEELEYA-QSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGR 106
+ + S+ +E + G +R G+ G + ++ AIR + R+ +
Sbjct: 63 NKLSHYSIYAVEEELKRGFMTIEGGHRVGLAGKVITEGGKVKAIRD----VSSFNIRIAK 118
Query: 107 AVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTS 160
G + + ++ G+ + +G P GKTT++R+ AR++S ++ +V IVD
Sbjct: 119 EQIGIAEPLIPYVYDGRWRHTMIIGSPQTGKTTLLRDAARLISSGTRRIPAQKVAIVDER 178
Query: 161 NEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 219
+EI G IP + G R+ V + + + M+ + + P+V+IVDEIG E ++ A
Sbjct: 179 SEIAGCVKGIPQFSFGP--RLDVLDACPKAEGMMMMIRSMSPDVMIVDEIGREEDSEAVL 236
Query: 220 SIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A GV + T HG ++++ + P L ++
Sbjct: 237 EAANAGVSVWTTVHGRNIQDVWQRPTLGPVM 267
>gi|229075902|ref|ZP_04208878.1| Stage III sporulation protein AA [Bacillus cereus Rock4-18]
gi|229098666|ref|ZP_04229606.1| Stage III sporulation protein AA [Bacillus cereus Rock3-29]
gi|229117691|ref|ZP_04247061.1| Stage III sporulation protein AA [Bacillus cereus Rock1-3]
gi|423377947|ref|ZP_17355231.1| stage III sporulation protein AA [Bacillus cereus BAG1O-2]
gi|423441067|ref|ZP_17417973.1| stage III sporulation protein AA [Bacillus cereus BAG4X2-1]
gi|423464141|ref|ZP_17440909.1| stage III sporulation protein AA [Bacillus cereus BAG6O-1]
gi|423533483|ref|ZP_17509901.1| stage III sporulation protein AA [Bacillus cereus HuB2-9]
gi|423547498|ref|ZP_17523856.1| stage III sporulation protein AA [Bacillus cereus HuB5-5]
gi|228665783|gb|EEL21255.1| Stage III sporulation protein AA [Bacillus cereus Rock1-3]
gi|228684745|gb|EEL38683.1| Stage III sporulation protein AA [Bacillus cereus Rock3-29]
gi|228707217|gb|EEL59414.1| Stage III sporulation protein AA [Bacillus cereus Rock4-18]
gi|401179219|gb|EJQ86392.1| stage III sporulation protein AA [Bacillus cereus HuB5-5]
gi|401636213|gb|EJS53967.1| stage III sporulation protein AA [Bacillus cereus BAG1O-2]
gi|402417728|gb|EJV50028.1| stage III sporulation protein AA [Bacillus cereus BAG4X2-1]
gi|402420408|gb|EJV52679.1| stage III sporulation protein AA [Bacillus cereus BAG6O-1]
gi|402463702|gb|EJV95402.1| stage III sporulation protein AA [Bacillus cereus HuB2-9]
Length = 308
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 118/267 (44%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + + E+ Y +
Sbjct: 6 EVLPKMMKQLVESCKQYNTLEEIRVRIGRPLECIAHGEV---FFYDYIATAEDASYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ +F G +R G+ G + + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+V+IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|197301796|ref|ZP_03166866.1| hypothetical protein RUMLAC_00522 [Ruminococcus lactaris ATCC
29176]
gi|197299236|gb|EDY33766.1| stage III sporulation protein AA [Ruminococcus lactaris ATCC 29176]
Length = 313
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/212 (30%), Positives = 100/212 (47%), Gaps = 19/212 (8%)
Query: 51 YLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGR 106
Y+ + E E Q V GG +R G+ G + R+ I+ I L RV
Sbjct: 74 YISHYSLYAYENELRQGFVTVEGG-HRVGVAGKVIMEKERVKNIQY----ISSLNIRVSH 128
Query: 107 AVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSD--EFQK--RVVIVDT 159
V G D + + K + L + P GKTT++R++ R +SD E+ K V +VD
Sbjct: 129 EVLGCADRLIPYIVANKQVCHTLIISPPCCGKTTLIRDLIRQISDGNEYVKGCSVGVVDE 188
Query: 160 SNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
+E+GG I + +GT R V + + + MI + + P+VI VDEIGT + HA
Sbjct: 189 RSELGGCYLGIAQNHLGT--RTDVLDCCPKAEGMIMLIRSMSPQVIAVDEIGTVEDIHAI 246
Query: 219 RSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ G +I + HG ++ P+L DLI
Sbjct: 247 EYAMQCGCRMIASVHGLNMDEASNKPVLGDLI 278
>gi|373856780|ref|ZP_09599524.1| stage III sporulation protein AA [Bacillus sp. 1NLA3E]
gi|372453759|gb|EHP27226.1| stage III sporulation protein AA [Bacillus sp. 1NLA3E]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 94/191 (49%), Gaps = 19/191 (9%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG--KSILF 127
G +R G+ G + ++ AIR+ I R+ + G D + L+ + +
Sbjct: 86 GGHRIGLAGKVILENGQVKAIRN----ISSFNIRIAKEKIGIADSLIPYLYKENWQHTMI 141
Query: 128 VGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTARRM 180
+G P GKTT++R+IAR++S + +V IVD +EI G + IP + G R+
Sbjct: 142 IGSPQTGKTTLLRDIARIISSGYLPMQLPPFKVGIVDERSEIAGSVNGIPQLSFGP--RI 199
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+V++VDEIG + +A A G+ LI T HG L +
Sbjct: 200 DVLDACPKAEGMMMMIRSMSPDVLVVDEIGRKEDAEAIMEAVNAGIKLIMTTHGNSLAEV 259
Query: 241 IKNPILSDLIG 251
+ P L ++
Sbjct: 260 QRRPSLQYILN 270
>gi|423400957|ref|ZP_17378130.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-2]
gi|423478338|ref|ZP_17455053.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-1]
gi|401653947|gb|EJS71490.1| stage III sporulation protein AA [Bacillus cereus BAG2X1-2]
gi|402428500|gb|EJV60597.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-1]
Length = 308
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQYDALEEIRVRIGRPLECIAHGEV---FFYDYVVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP G R+ V + + + M+ + + P+V+IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGA--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|415885462|ref|ZP_11547390.1| stage III sporulation protein AA [Bacillus methanolicus MGA3]
gi|387591131|gb|EIJ83450.1| stage III sporulation protein AA [Bacillus methanolicus MGA3]
Length = 307
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 90/192 (46%), Gaps = 19/192 (9%)
Query: 72 FGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI-- 125
G +R G+ G + ++ AIR I R+ R G D + L +
Sbjct: 84 ISGGHRVGLAGKVILENSQVKAIRD----ISSFNIRIARERIGIADPLVPFLFDNGWLHT 139
Query: 126 LFVGRPGVGKTTVMREIARVLS---DEF---QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ +G P GKTT++R+IAR++S D +V IVD +EI G IP G
Sbjct: 140 MIIGPPQTGKTTLLRDIARIISTGNDALGLSASKVGIVDERSEIAGCVKGIPQLTFGN-- 197
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + M+ + + P+V++VDEIG E +A A G+ LI T HG L
Sbjct: 198 RIDVLDACPKAEGMMMMIRSMSPDVLVVDEIGREEDALAIMEAVNAGIKLIMTTHGSSLL 257
Query: 239 NIIKNPILSDLI 250
I K P L ++
Sbjct: 258 EIRKRPSLKKIL 269
>gi|339010279|ref|ZP_08642849.1| stage III sporulation protein AA [Brevibacillus laterosporus LMG
15441]
gi|338772434|gb|EGP31967.1| stage III sporulation protein AA [Brevibacillus laterosporus LMG
15441]
Length = 320
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 16/165 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHY------GKSILFVGRPGVGKTTVMREIARVLS--D 148
I R+ R G + D+L Y +S L + P GKTT++R++AR +S +
Sbjct: 121 ITSFNIRIAREKKG---VARDILAYLFDQGQFQSTLVISPPQCGKTTLLRDLARSISYGN 177
Query: 149 EFQ--KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
E+ K+V IVD +EI G + IP +G R V + + M+ + + P++++
Sbjct: 178 EWSSSKKVGIVDERSEIAGCYNGIPQRDVGP--RTDVLDACPKAIGMMMMIRSMSPDLVV 235
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VDEIG + ++ A GV ++ +AHG LE+I K P +S LI
Sbjct: 236 VDEIGRQEDSEAIWEALHAGVGVLCSAHGISLEDIAKRPTISRLI 280
>gi|210615799|ref|ZP_03290780.1| hypothetical protein CLONEX_02998 [Clostridium nexile DSM 1787]
gi|210150135|gb|EEA81144.1| hypothetical protein CLONEX_02998 [Clostridium nexile DSM 1787]
Length = 317
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 86/186 (46%), Gaps = 12/186 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGR 130
G +R G+ G + I + RV V + ++ + Y K + L +
Sbjct: 100 GGHRVGMAGQVIMEGGKIKNMKYISSINIRVSHEVLDCANKIFPYITYNKQMYHTLIISP 159
Query: 131 PGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD--GDIPHSAIGTARRMQVPE 184
P GKTT++R++ R +SD + V +VD +E+GG G I ++ R + +
Sbjct: 160 PRCGKTTLLRDVIRQISDGNRWIKGCTVGVVDERSELGGCYLGVIQNN---LGMRTDILD 216
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ MI + + P+V+ VDEIG + + HA G ++ TAHG+ +E I K P
Sbjct: 217 RCPKADGMIMLIRSMAPQVVAVDEIGAKEDVHAIEYAMHCGCKMLATAHGDSMEEICKKP 276
Query: 245 ILSDLI 250
I LI
Sbjct: 277 IFEKLI 282
>gi|423521947|ref|ZP_17498420.1| stage III sporulation protein AA [Bacillus cereus HuA4-10]
gi|401176609|gb|EJQ83804.1| stage III sporulation protein AA [Bacillus cereus HuA4-10]
Length = 308
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 66/265 (24%), Positives = 122/265 (46%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP +R ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKMMRQLVEGCKQYDALEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|421874483|ref|ZP_16306087.1| stage III sporulation protein AA [Brevibacillus laterosporus GI-9]
gi|372456527|emb|CCF15636.1| stage III sporulation protein AA [Brevibacillus laterosporus GI-9]
Length = 320
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 86/165 (52%), Gaps = 16/165 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHY------GKSILFVGRPGVGKTTVMREIARVLS--D 148
I R+ R G + D+L Y +S L + P GKTT++R++AR +S +
Sbjct: 121 ITSFNIRIAREKKG---VARDILAYLFDQGQFQSTLVISPPQCGKTTLLRDLARSISYGN 177
Query: 149 EFQ--KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
E+ K+V IVD +EI G + IP +G R V + + M+ + + P++++
Sbjct: 178 EWSSSKKVGIVDERSEIAGCYNGIPQRDVGP--RTDVLDACPKAIGMMMMIRSMSPDLVV 235
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VDEIG + ++ A GV ++ +AHG LE+I K P +S LI
Sbjct: 236 VDEIGRQEDSEAIWEALHAGVGVLCSAHGISLEDIAKRPTISRLI 280
>gi|423541261|ref|ZP_17517652.1| stage III sporulation protein AA [Bacillus cereus HuB4-10]
gi|401172449|gb|EJQ79670.1| stage III sporulation protein AA [Bacillus cereus HuB4-10]
Length = 308
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + + E+ Y +
Sbjct: 6 EVLPKMMKQLVESCKQYNTLEEIRVRIGRPLECIAHGEV---FFYDYIATAEDASYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ +F G +R G+ G + + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+V+IVDEIG + + A
Sbjct: 183 GCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDTEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|300854289|ref|YP_003779273.1| stage III sporulation protein AA [Clostridium ljungdahlii DSM
13528]
gi|300434404|gb|ADK14171.1| predicted stage III sporulation protein AA [Clostridium ljungdahlii
DSM 13528]
Length = 308
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 81/164 (49%), Gaps = 12/164 (7%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQ-- 151
I L R+ R V D + + G I+ + P GKTT++R+I R +S +
Sbjct: 112 IASLNIRICREVVNCSDSIMKFISKGNEIINTIIISPPKCGKTTLVRDIVRNISQGVKNI 171
Query: 152 ----KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIV 206
K+V ++D +EIG + +P +G R + + + + +I A+ + PEVI+
Sbjct: 172 GLTGKKVSVIDERSEIGACFNGVPQLNVGV--RTDILDGCPKSQGIIMAIRSMSPEVIVC 229
Query: 207 DEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
DEIGT + + + G+ LI T HG +E++ P+ +++
Sbjct: 230 DEIGTYRDMDSIVTALNSGISLIITIHGYGIEDLYNRPVFKEIV 273
>gi|333370541|ref|ZP_08462536.1| stage III sporulation protein AA [Desmospora sp. 8437]
gi|332977550|gb|EGK14320.1| stage III sporulation protein AA [Desmospora sp. 8437]
Length = 321
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 9/161 (5%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYG---KSILFVGRPGVGKTTVMREIARVLSDE---F 150
+ G RV R V G + + G ++IL V P GKTT++R++ R++S
Sbjct: 122 VTGFNLRVARQVKGVARRLLSRILPGGQLENILIVSPPQCGKTTLLRDLTRIVSSGETIP 181
Query: 151 QKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
++V +VD +EI G + +P +G R V + + + M+ + + PE+++VDEI
Sbjct: 182 SRKVGVVDERSEIAGCVEGVPQHDVGP--RTDVLDGCPKAEGMMMLIRSMSPELLVVDEI 239
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
G + A GV L TAHG +E + + P ++ L+
Sbjct: 240 GRREDGEAVFEAVHAGVSLFTTAHGSSMEEVCRRPGIAQLV 280
>gi|228929239|ref|ZP_04092266.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228830529|gb|EEM76139.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 308
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ +++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVESCKQYDALEEIRVRIGRPLECIAHGEVFFYDYIVTAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|30264268|ref|NP_846645.1| stage III sporulation protein AA [Bacillus anthracis str. Ames]
gi|47529711|ref|YP_021060.1| stage III sporulation protein AA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49187095|ref|YP_030347.1| stage III sporulation protein AA [Bacillus anthracis str. Sterne]
gi|49480626|ref|YP_038254.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|65321579|ref|ZP_00394538.1| COG3854: Uncharacterized protein conserved in bacteria [Bacillus
anthracis str. A2012]
gi|165872983|ref|ZP_02217605.1| stage III sporulation protein AA [Bacillus anthracis str. A0488]
gi|167634531|ref|ZP_02392851.1| stage III sporulation protein AA [Bacillus anthracis str. A0442]
gi|167638567|ref|ZP_02396843.1| stage III sporulation protein AA [Bacillus anthracis str. A0193]
gi|170687461|ref|ZP_02878678.1| stage III sporulation protein AA [Bacillus anthracis str. A0465]
gi|170709034|ref|ZP_02899464.1| stage III sporulation protein AA [Bacillus anthracis str. A0389]
gi|177654810|ref|ZP_02936567.1| stage III sporulation protein AA [Bacillus anthracis str. A0174]
gi|190566110|ref|ZP_03019029.1| stage III sporulation protein AA [Bacillus anthracis str.
Tsiankovskii-I]
gi|218905329|ref|YP_002453163.1| stage III sporulation protein AA [Bacillus cereus AH820]
gi|227816969|ref|YP_002816978.1| stage III sporulation protein AA [Bacillus anthracis str. CDC 684]
gi|228916829|ref|ZP_04080394.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228935516|ref|ZP_04098334.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228947910|ref|ZP_04110197.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|229123713|ref|ZP_04252908.1| Stage III sporulation protein AA [Bacillus cereus 95/8201]
gi|229602406|ref|YP_002868487.1| stage III sporulation protein AA [Bacillus anthracis str. A0248]
gi|254683957|ref|ZP_05147817.1| stage III sporulation protein AA [Bacillus anthracis str.
CNEVA-9066]
gi|254721792|ref|ZP_05183581.1| stage III sporulation protein AA [Bacillus anthracis str. A1055]
gi|254736305|ref|ZP_05194011.1| stage III sporulation protein AA [Bacillus anthracis str. Western
North America USA6153]
gi|254741343|ref|ZP_05199030.1| stage III sporulation protein AA [Bacillus anthracis str. Kruger B]
gi|254754023|ref|ZP_05206058.1| stage III sporulation protein AA [Bacillus anthracis str. Vollum]
gi|254757894|ref|ZP_05209921.1| stage III sporulation protein AA [Bacillus anthracis str. Australia
94]
gi|386738084|ref|YP_006211265.1| Stage III sporulation protein AA [Bacillus anthracis str. H9401]
gi|421506452|ref|ZP_15953375.1| stage III sporulation protein AA [Bacillus anthracis str. UR-1]
gi|421638274|ref|ZP_16078870.1| stage III sporulation protein AA [Bacillus anthracis str. BF1]
gi|30258913|gb|AAP28131.1| stage III sporulation protein AA [Bacillus anthracis str. Ames]
gi|47504859|gb|AAT33535.1| stage III sporulation protein AA [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181022|gb|AAT56398.1| stage III sporulation protein AA [Bacillus anthracis str. Sterne]
gi|49332182|gb|AAT62828.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
konkukian str. 97-27]
gi|164711266|gb|EDR16821.1| stage III sporulation protein AA [Bacillus anthracis str. A0488]
gi|167513415|gb|EDR88785.1| stage III sporulation protein AA [Bacillus anthracis str. A0193]
gi|167529983|gb|EDR92718.1| stage III sporulation protein AA [Bacillus anthracis str. A0442]
gi|170126061|gb|EDS94958.1| stage III sporulation protein AA [Bacillus anthracis str. A0389]
gi|170668656|gb|EDT19402.1| stage III sporulation protein AA [Bacillus anthracis str. A0465]
gi|172080471|gb|EDT65557.1| stage III sporulation protein AA [Bacillus anthracis str. A0174]
gi|190563029|gb|EDV16995.1| stage III sporulation protein AA [Bacillus anthracis str.
Tsiankovskii-I]
gi|218535151|gb|ACK87549.1| stage III sporulation protein AA [Bacillus cereus AH820]
gi|227007321|gb|ACP17064.1| stage III sporulation protein AA [Bacillus anthracis str. CDC 684]
gi|228659848|gb|EEL15493.1| Stage III sporulation protein AA [Bacillus cereus 95/8201]
gi|228811897|gb|EEM58231.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228824268|gb|EEM70082.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228843016|gb|EEM88099.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|229266814|gb|ACQ48451.1| stage III sporulation protein AA [Bacillus anthracis str. A0248]
gi|384387936|gb|AFH85597.1| Stage III sporulation protein AA [Bacillus anthracis str. H9401]
gi|401823445|gb|EJT22592.1| stage III sporulation protein AA [Bacillus anthracis str. UR-1]
gi|403394700|gb|EJY91940.1| stage III sporulation protein AA [Bacillus anthracis str. BF1]
Length = 308
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ +++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVESCKQYDALEEIRVRIGRPLECIAHGEVFFYDYIVTAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|196034946|ref|ZP_03102353.1| stage III sporulation protein AA [Bacillus cereus W]
gi|195992485|gb|EDX56446.1| stage III sporulation protein AA [Bacillus cereus W]
Length = 308
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 123/265 (46%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ +++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVESCKQYDALEEIRVRIGRPLECIAHGEVFFYDYIVTAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|261417733|ref|YP_003251415.1| stage III sporulation protein AA [Geobacillus sp. Y412MC61]
gi|319767455|ref|YP_004132956.1| stage III sporulation protein AA [Geobacillus sp. Y412MC52]
gi|261374190|gb|ACX76933.1| stage III sporulation protein AA [Geobacillus sp. Y412MC61]
gi|317112321|gb|ADU94813.1| stage III sporulation protein AA [Geobacillus sp. Y412MC52]
Length = 306
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 32/271 (11%)
Query: 6 AFWQILPSDLRDRLQN---DSKRG---------QLLEVILD-LGRLPEARYLGEFGGKYL 52
A W ILP + LQ+ +RG + LEVI+D RL E G L
Sbjct: 3 AVWGILPKTVAAALQHHLPSCRRGIEEIRIRVSRPLEVIVDGTARLLPYEVTKEDGVHLL 62
Query: 53 -RSTEVSVEELEYA-QSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGR 106
+ + S+ +E + G +R G+ G + ++ AIR + R+ +
Sbjct: 63 NKLSHYSIYAVEEELKRGFMTIEGGHRVGLAGKVITEGGKVKAIRD----VSSFNIRIAK 118
Query: 107 AVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF----QKRVVIVDTS 160
G + + ++ G+ + +G P GKTT++R+ AR++S ++V IVD
Sbjct: 119 EQIGIAEPLIPYVYDGRWRHTMIIGSPQTGKTTLLRDAARLISSGTGRIPAQKVAIVDER 178
Query: 161 NEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 219
+EI G IP + G R+ V + + + M+ + + P+V+IVDEIG E ++ A
Sbjct: 179 SEIAGCVKGIPQFSFGP--RLDVLDACPKAEGMMMMIRSMSPDVMIVDEIGREEDSEAVL 236
Query: 220 SIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A GV + T HG ++++ + P L ++
Sbjct: 237 EAANAGVSVWTTVHGRNIQDVWQRPTLGPVM 267
>gi|229163141|ref|ZP_04291096.1| Stage III sporulation protein AA [Bacillus cereus R309803]
gi|228620204|gb|EEK77075.1| Stage III sporulation protein AA [Bacillus cereus R309803]
Length = 308
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +G+ E GE F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKQLVEGCKQYDTLEEIRVRIGKPLECIAHGEVFFYDYITTAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYEERWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG E+++K P L ++
Sbjct: 239 VHAGVQLFISAHGFSYEDVVKRPSLQAVL 267
>gi|402815122|ref|ZP_10864715.1| stage III sporulation protein AA [Paenibacillus alvei DSM 29]
gi|402507493|gb|EJW18015.1| stage III sporulation protein AA [Paenibacillus alvei DSM 29]
Length = 335
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/197 (29%), Positives = 96/197 (48%), Gaps = 25/197 (12%)
Query: 73 GGDNRAGIEG----TLHRISAIRSRKGAIVGLTCRVGRAVSGHID-MVYDLLHYGK---- 123
G +R G+ G T R+S +R I G R+ R V+G D ++ LL +
Sbjct: 99 AGGHRIGLAGRTVLTQGRVSHLRD----ITGFNLRIAREVAGIADEIIPQLLDFAHRTIY 154
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHSA 173
S L V P GKTT++R++AR +S +V IVD +EI G +P
Sbjct: 155 STLVVSPPQHGKTTMLRDMARAVSSGCWNHPQAVWKALKVGIVDERSEIAGCMKGVPSYN 214
Query: 174 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
+G R V + + + ++ + + P+V++VDE G E + A + GV +I + H
Sbjct: 215 LGY--RTDVIDGCPKAEGLMMFIRSMSPDVLVVDEFGREEDYDAMQEAIHAGVRMIASVH 272
Query: 234 GEWLENIIKNPILSDLI 250
G +E+I++ P L+ L+
Sbjct: 273 GSDVEDILRRPGLASLL 289
>gi|297529425|ref|YP_003670700.1| stage III sporulation protein AA [Geobacillus sp. C56-T3]
gi|297252677|gb|ADI26123.1| stage III sporulation protein AA [Geobacillus sp. C56-T3]
Length = 306
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 72/271 (26%), Positives = 125/271 (46%), Gaps = 32/271 (11%)
Query: 6 AFWQILPSDLRDRLQN---DSKRG---------QLLEVILD-LGRLPEARYLGEFGGKYL 52
A W ILP + LQ+ +RG + LEVI+D RL E G L
Sbjct: 3 AVWGILPKTVAAALQHHLPSCRRGIEEIRIRVSRPLEVIVDGTARLLPYEVTKEDGVHLL 62
Query: 53 -RSTEVSVEELEYA-QSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGR 106
+ + S+ +E + G +R G+ G + ++ AIR + R+ +
Sbjct: 63 NKLSHYSIYAVEEELKRGFMTIEGGHRVGLAGKVITEGGKVKAIRD----VSSFNIRIAK 118
Query: 107 AVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTS 160
G + + ++ G+ + +G P GKTT++R+ AR++S ++ +V IVD
Sbjct: 119 EQIGIAEPLIPYVYDGRWRHTMIIGSPQTGKTTLLRDAARLISSGTRRIPAQKVAIVDER 178
Query: 161 NEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 219
+EI G IP + G R+ V + + + M+ + P+V+IVDEIG E ++ A
Sbjct: 179 SEIAGCVKGIPQFSFGP--RLDVLDACPKAEGMMMMIRAMSPDVMIVDEIGREEDSEAVL 236
Query: 220 SIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A GV + T HG ++++ + P L ++
Sbjct: 237 EAANAGVSVWTTVHGRNIQDVWQRPTLGPVM 267
>gi|374708800|ref|ZP_09713234.1| stage III sporulation protein AA [Sporolactobacillus inulinus CASD]
Length = 317
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGDGD-IPHSAIGT 176
S L +G P GKTT++R++AR++S+ ++ IVD +E+ G D +P + +G
Sbjct: 144 STLLIGAPQTGKTTMLRDLARLVSEGIPDRYLPSRKTAIVDERSELAGCVDGVPQNRLGV 203
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + + M+ + + PEV+IVDEIG + A GV ++ +AHG
Sbjct: 204 --RADVMDACPKAEGMMMMIRSMSPEVLIVDEIGGAEDTKALLEALNAGVAVMASAHGFT 261
Query: 237 LENIIKNPILSDLI 250
+ ++ P + LI
Sbjct: 262 FDQLLHRPSIRPLI 275
>gi|226323219|ref|ZP_03798737.1| hypothetical protein COPCOM_00991 [Coprococcus comes ATCC 27758]
gi|225208409|gb|EEG90763.1| stage III sporulation protein AA [Coprococcus comes ATCC 27758]
Length = 305
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 95/186 (51%), Gaps = 12/186 (6%)
Query: 74 GDNRAGIEGTL-HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGK--SILFVG 129
G +R GI G + IR+ + I + R+ ++G + ++ +L G+ + +
Sbjct: 90 GGHRVGISGKIISEKEQIRNFQ-YITSINIRICHEITGCANKLFPVILEKGRLCHTMIIS 148
Query: 130 RPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 184
PG GKTT++R++ R +SD + + V +VD +EIGG +P + +G R + +
Sbjct: 149 PPGGGKTTLLRDLVRQISDGNRWVEGRNVGVVDERSEIGGCYRGVPQNQLGM--RTDILD 206
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ + M+ V + PEVI DEIGT + A G ++ T HG ++ I + P
Sbjct: 207 NCPKAEGMMMLVRSMAPEVIAADEIGTAKDVEAIEYAMHCGATMLTTVHGSGMDEIREKP 266
Query: 245 ILSDLI 250
++S+L+
Sbjct: 267 LVSNLV 272
>gi|451819552|ref|YP_007455753.1| stage III sporulation protein AA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
gi|451785531|gb|AGF56499.1| stage III sporulation protein AA [Clostridium
saccharoperbutylacetonicum N1-4(HMT)]
Length = 308
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/191 (32%), Positives = 94/191 (49%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---L 126
G +R GI G + IR+ I L R+ R V G D + + I +
Sbjct: 89 GGHRIGIAGECVMEKGEVKTIRN----ISSLNIRICREVIGCSDKIMKYIASKIKIYNTI 144
Query: 127 FVGRPGVGKTTVMREIARVLSD------EFQKRVVIVDTSNEIGGDG-DIPHSAIGTARR 179
+ P GKTT++R+IAR +S+ K+VV+VD +EI IP S +G R
Sbjct: 145 IISPPKCGKTTIIRDIARNISNGVFSLGVSGKKVVVVDERSEIAACHLGIPQSNLGL--R 202
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + L+ + +I A+ + PEV+I DEIGT+ + A GV +I T HG +E+
Sbjct: 203 TDVLDNCLKREGLIMAIRSLSPEVLICDEIGTKGDTEALMMAFNSGVNIITTIHGFTVED 262
Query: 240 IIKNPILSDLI 250
+ K + SDL+
Sbjct: 263 LYKRKVFSDLL 273
>gi|423417881|ref|ZP_17394970.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-1]
gi|401107052|gb|EJQ15009.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-1]
Length = 308
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKQLVEGCKQYDALEEIRVRIGRPLECIAHGEVFFYDYIATAEDAL----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 239 VHAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|291544826|emb|CBL17935.1| Uncharacterized protein conserved in bacteria [Ruminococcus
champanellensis 18P13]
Length = 295
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 77/157 (49%), Gaps = 7/157 (4%)
Query: 97 IVGLTCRVGRAVSGHIDMVYD-LLHYGK-SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
+ L R+ + V G +Y+ L G+ S+L +G P GKTT++R++ R+L + RV
Sbjct: 117 VSSLNIRIAKQVLGCGQALYEKLFAQGRQSVLLLGPPASGKTTMLRDLCRLLGSRY--RV 174
Query: 155 VIVDTSNEIGG-DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEA 213
+VD E+ IP +G + P Q M A+ P+ II DE+G+EA
Sbjct: 175 SVVDERGELAACRQGIPTHDLGAMTDVFDGYPKAQG--MQIALRVMTPDYIICDELGSEA 232
Query: 214 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
E A + GV ++GTAH L + P L L+
Sbjct: 233 ETTAVLASMNSGVSILGTAHAGSLAQAERRPQLRCLL 269
>gi|229157792|ref|ZP_04285867.1| Stage III sporulation protein AA [Bacillus cereus ATCC 4342]
gi|228625749|gb|EEK82501.1| Stage III sporulation protein AA [Bacillus cereus ATCC 4342]
Length = 308
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKWCDALEEIRVRIGRPLECIAHGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|228987384|ref|ZP_04147504.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229093252|ref|ZP_04224370.1| Stage III sporulation protein AA [Bacillus cereus Rock3-42]
gi|228690226|gb|EEL44020.1| Stage III sporulation protein AA [Bacillus cereus Rock3-42]
gi|228772356|gb|EEM20802.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 308
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKWCDALEEIRVRIGRPLECIAHGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|15895363|ref|NP_348712.1| stage III sporulation protein AA [Clostridium acetobutylicum ATCC
824]
gi|337737311|ref|YP_004636758.1| stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum DSM 1731]
gi|384458819|ref|YP_005671239.1| Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum EA 2018]
gi|15025082|gb|AAK80052.1|AE007711_9 Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum ATCC 824]
gi|325509508|gb|ADZ21144.1| Stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum EA 2018]
gi|336291043|gb|AEI32177.1| stage III sporulation protein AA, SpoIIIAA [Clostridium
acetobutylicum DSM 1731]
Length = 305
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/191 (28%), Positives = 93/191 (48%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL--- 126
G +R GI G ++I I++ I L R+ + V+G + + + YG ++L
Sbjct: 86 GGHRVGICGDCVLEENKIKTIKN----ISSLNIRICKEVTGCSNSIMKKIVYGNTVLNTI 141
Query: 127 FVGRPGVGKTTVMREIARVLS---DEFQ---KRVVIVDTSNEIGGD-GDIPHSAIGTARR 179
+ P GKTT++R+I R +S + Q K+V ++D +EIG + IG R
Sbjct: 142 IISPPNCGKTTLLRDITRNISYGINSIQFRGKKVCVIDERSEIGACLNGVNQMDIGI--R 199
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
+ + + ++ A+ + PEVII DEIGT + + + GV LI T HG +E+
Sbjct: 200 TDILDNCPKSIGIMMAIRSMAPEVIICDEIGTYDDIKSILTAVNCGVKLITTIHGFGIED 259
Query: 240 IIKNPILSDLI 250
+ + D I
Sbjct: 260 LNSRDVFKDAI 270
>gi|357051938|ref|ZP_09113056.1| stage III sporulation protein AA [Clostridium clostridioforme
2_1_49FAA]
gi|355387206|gb|EHG34232.1| stage III sporulation protein AA [Clostridium clostridioforme
2_1_49FAA]
Length = 357
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 103/217 (47%), Gaps = 20/217 (9%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ S + E E Q + GG +R G+ G T+ IR K +I + RV V
Sbjct: 100 EYMCSFSLYAAEEELRQGFITIQGG-HRIGVAGRTMALGQDIRLMK-SISFINIRVAHQV 157
Query: 109 SGHIDMVYDLLHYGK----SILFVGRPGVGKTTVMREIARVLSDEFQKR----------V 154
G + V + L+ + L + P GKTT++R+I R +SD + + V
Sbjct: 158 QGCANQVMEYLYSDDGRFLNTLVISPPRCGKTTLLRDIIRQVSDGPRTQRAGRRIPGVSV 217
Query: 155 VIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEA 213
+VD +E+G +P + +G R + + + + M+ V + P+VI VDEIG+
Sbjct: 218 GVVDERSELGACYQGVPQNDLGM--RTDILDCCPKSQGMMMLVRSMAPQVIAVDEIGSRE 275
Query: 214 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ A + G L T HG LE+I++ P + +LI
Sbjct: 276 DVRAIEYVRNCGCSLAATIHGSSLEDIMQKPAVGELI 312
>gi|89099238|ref|ZP_01172116.1| stage III sporulation protein AA [Bacillus sp. NRRL B-14911]
gi|89086084|gb|EAR65207.1| stage III sporulation protein AA [Bacillus sp. NRRL B-14911]
Length = 356
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 87/190 (45%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI--LF 127
G +R G+ G + ++ AIR I RV R G D + L+ + +
Sbjct: 133 GGHRVGLAGKVILDGGKVKAIRD----ISSFNIRVAREKIGTADRLIPYLYSSGWLHTMV 188
Query: 128 VGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD-GDIPHSAIGTARRM 180
VG P GKTT++R+IAR++S + IVD +EI G IP G R+
Sbjct: 189 VGPPQTGKTTLLRDIARIVSSGAANPAIAAQKAGIVDERSEIAGSVSGIPQMTFGP--RV 246
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+V++VDEIG + + A G+ L+ T HG E I
Sbjct: 247 DVLDACPKAEGMMMMIRSMSPDVLLVDEIGRQEDGEAIMEAVHAGIKLMMTTHGRSWEEI 306
Query: 241 IKNPILSDLI 250
P L ++
Sbjct: 307 KNRPTLKQIL 316
>gi|355672461|ref|ZP_09058391.1| stage III sporulation protein AA [Clostridium citroniae WAL-17108]
gi|354815162|gb|EHE99758.1| stage III sporulation protein AA [Clostridium citroniae WAL-17108]
Length = 328
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 63/212 (29%), Positives = 99/212 (46%), Gaps = 15/212 (7%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ S + E E Q + GG +R G+ G TL + IR K I + RV +
Sbjct: 82 EYMSSFSLYAAEEELRQGFLTIQGG-HRIGVAGKTLVQGQDIRLMK-FISFINIRVAHEI 139
Query: 109 SGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK-------RVVIVDT 159
G D V D L+ + + L + P GKTT++R+I R +S+ + V +VD
Sbjct: 140 LGCADPVMDYLYMDRFLNTLIISPPRCGKTTLLRDIIRQVSNGRSRDRWIPGMSVGVVDE 199
Query: 160 SNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
+E+ IP + +G R V + + + M+ V P VI VDEIG+ + A
Sbjct: 200 RSELAACYQGIPQNDLGV--RTDVLDCCPKSQGMMMLVRTMAPGVIAVDEIGSRQDMEAI 257
Query: 219 RSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ G L T HG LE+I + P + +L+
Sbjct: 258 EYVRNCGCSLAATIHGNSLEDIRQKPCMGELL 289
>gi|399889154|ref|ZP_10775031.1| stage III sporulation protein AA [Clostridium arbusti SL206]
Length = 306
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 22/209 (10%)
Query: 58 SVEELEYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHID 113
S+E+ E Q + GG +R GI G +R+ I+ I L R+ R + G +
Sbjct: 73 SIED-EIKQGYITIKGG-HRVGICGNCIIENNRVKTIKD----ISSLNIRICREIIGCSN 126
Query: 114 MVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIG 164
+ + K+IL + P GKTT++R+I R +S+ K V ++D +EI
Sbjct: 127 KIMPWILKDKNILNTIIISPPKCGKTTLIRDITRNISNGMDNTLLKGKNVCVIDERSEIC 186
Query: 165 GDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
D IP +G R V + + + ++ A+ + P+VI+ DEIGT + + +
Sbjct: 187 ASSDGIPQLNVGI--RTDVMDNCPKSQGIMMAIRSMAPDVIVCDEIGTYDDVKSILAALN 244
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLIGG 252
GV LI T HG +E++ + D+I
Sbjct: 245 CGVNLITTIHGFGIEDLNSRDVFKDVISN 273
>gi|229019412|ref|ZP_04176235.1| Stage III sporulation protein AA [Bacillus cereus AH1273]
gi|229025656|ref|ZP_04182062.1| Stage III sporulation protein AA [Bacillus cereus AH1272]
gi|423389488|ref|ZP_17366714.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-3]
gi|228735654|gb|EEL86243.1| Stage III sporulation protein AA [Bacillus cereus AH1272]
gi|228741882|gb|EEL92059.1| Stage III sporulation protein AA [Bacillus cereus AH1273]
gi|401641579|gb|EJS59296.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-3]
Length = 308
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 34/265 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKQLVEGCKQYDALEEIRVRIGRPLECIAHGEVFFYDYIATAEDAL----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPIL 246
GV L +AHG ++++K P L
Sbjct: 239 VHAGVQLFISAHGFSYDDVVKRPSL 263
>gi|423483786|ref|ZP_17460476.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-2]
gi|401141337|gb|EJQ48892.1| stage III sporulation protein AA [Bacillus cereus BAG6X1-2]
Length = 308
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 120/268 (44%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVEGCKQYDALEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGH 111
E + G +R G+ G + + IR + R+ R G
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSEVKMIRD----VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSRGVSASKISSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+V+IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|336421575|ref|ZP_08601732.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_57FAA]
gi|336000459|gb|EGN30609.1| stage III sporulation protein AA [Lachnospiraceae bacterium
5_1_57FAA]
Length = 312
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVS 109
+Y+ + + E E Q + GG +R G+ G + I + R+ V
Sbjct: 70 EYISNYSLYAYEQEMKQGFITIEGG-HRVGMTGQAIIENGKVKNLKHISSVNVRMSHEVL 128
Query: 110 GHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 162
G D V+ + Y +S+ L + P GKTT++R++ R +SD V +VD +E
Sbjct: 129 GCADKVFPYITYNRSLYHTLVISPPRCGKTTLLRDMIRQISDGNDWVRGMAVGVVDERSE 188
Query: 163 IGGDGDIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
IGG +G A+ R V + + + MI + + PEVI VDEIG+ + HA
Sbjct: 189 IGG------CYMGVAQNHLGIRTDVLDGCPKAEGMIMLIRSMGPEVIAVDEIGSAEDVHA 242
Query: 218 CRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
G ++ T H +E + K P+L +I
Sbjct: 243 IEYAMHCGCKMLATVHAGSMEELRKKPLLDQMI 275
>gi|153855227|ref|ZP_01996393.1| hypothetical protein DORLON_02407 [Dorea longicatena DSM 13814]
gi|149752226|gb|EDM62157.1| stage III sporulation protein AA [Dorea longicatena DSM 13814]
Length = 317
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 97/214 (45%), Gaps = 19/214 (8%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVS 109
+Y+ + + E E Q + GG +R G+ G + I + RV +
Sbjct: 72 EYISNYSLYACEQEMRQGFITIEGG-HRVGLSGQAIMENGKVKNLKYISSVNIRVAHEMI 130
Query: 110 GHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 162
G D V+ + + + L V PG GKTT++R++ R +S+ V +VD +E
Sbjct: 131 GCADAVFPYIVCNRVLCHTLIVSPPGCGKTTMLRDLIRQISEGNSWIPGLAVGVVDERSE 190
Query: 163 IGGDGDIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
IGG +G A+ R + + + + MI + + P+VI VDEIGT + HA
Sbjct: 191 IGG------CYMGVAQNHLGIRTDILDGCPKAEGMIMLIRSMGPQVIAVDEIGTPEDVHA 244
Query: 218 CRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
G ++ T H E +E + K P+ + +IG
Sbjct: 245 IEYAMHCGCKMLATVHAESMEELRKKPLFNRMIG 278
>gi|423612416|ref|ZP_17588277.1| stage III sporulation protein AA [Bacillus cereus VD107]
gi|401246005|gb|EJR52357.1| stage III sporulation protein AA [Bacillus cereus VD107]
Length = 308
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 122/265 (46%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVEGCKQYDVLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|47569452|ref|ZP_00240133.1| stage III sporulation protein AA [Bacillus cereus G9241]
gi|47553867|gb|EAL12237.1| stage III sporulation protein AA [Bacillus cereus G9241]
Length = 308
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 64/268 (23%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKWCDALEEIRVRIGRPLECIAHGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYETRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|166030404|ref|ZP_02233233.1| hypothetical protein DORFOR_00065 [Dorea formicigenerans ATCC
27755]
gi|166029762|gb|EDR48519.1| stage III sporulation protein AA [Dorea formicigenerans ATCC 27755]
Length = 316
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 51 YLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSG 110
Y+ + E E +Q + GG +R G+ G + I + R+ + G
Sbjct: 70 YISGYSLYSYEREMSQGYITIEGG-HRVGLSGQAIMENGKVKNLKYISSINVRMSHEILG 128
Query: 111 HIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLS--DEFQK--RVVIVDTSNEI 163
D + + + + + L V PG GKTT++R++ R +S +EF K V +VD +EI
Sbjct: 129 CADGLLPYITFHRRLYHTLLVSPPGCGKTTLLRDLIRQISEGNEFIKGMSVGVVDERSEI 188
Query: 164 GGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G + + +G R V + + + MI + + PEVI VDEIG + HA
Sbjct: 189 AGCYRGVAQNHLGI--RTDVLDGCPKAEGMIMLIRSMRPEVIAVDEIGGSEDVHAIEYAM 246
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
G +I TAH + +E + K P+ LI
Sbjct: 247 HCGCRMIATAHADSMEELQKKPVFDRLI 274
>gi|170760679|ref|YP_001787223.1| stage III sporulation protein AA [Clostridium botulinum A3 str.
Loch Maree]
gi|169407668|gb|ACA56079.1| stage III sporulation protein AA [Clostridium botulinum A3 str.
Loch Maree]
Length = 307
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL--- 126
G +R GI G ++ IR I L R+ R + +V + +L
Sbjct: 86 GGHRVGICGRCVIDGGKVKTIRD----ISSLNIRICREIYNASKLVMPYIVENGQVLNTI 141
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I++ +SD K+V ++D +EI G + +P +G R
Sbjct: 142 IISPPKCGKTTIIRDISKKISDGVDALSLKGKKVSVIDERSEIAGSYNGVPQLDVGL--R 199
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E+
Sbjct: 200 TDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVED 259
Query: 240 IIKNPILSDLI 250
I P+ +++
Sbjct: 260 IYNRPVFKEIV 270
>gi|170757502|ref|YP_001781446.1| stage III sporulation protein AA [Clostridium botulinum B1 str.
Okra]
gi|429246197|ref|ZP_19209539.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001628]
gi|169122714|gb|ACA46550.1| stage III sporulation protein AA [Clostridium botulinum B1 str.
Okra]
gi|428756801|gb|EKX79331.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001628]
Length = 307
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 178
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVE 258
Query: 239 NIIKNPILSDLI 250
+I P+ +++
Sbjct: 259 DIYNRPVFKEIV 270
>gi|163941952|ref|YP_001646836.1| sporulation stage III protein AA [Bacillus weihenstephanensis
KBAB4]
gi|423518898|ref|ZP_17495379.1| stage III sporulation protein AA [Bacillus cereus HuA2-4]
gi|423669780|ref|ZP_17644809.1| stage III sporulation protein AA [Bacillus cereus VDM034]
gi|163864149|gb|ABY45208.1| Sporulation stage III protein AA [Bacillus weihenstephanensis
KBAB4]
gi|401159953|gb|EJQ67332.1| stage III sporulation protein AA [Bacillus cereus HuA2-4]
gi|401298907|gb|EJS04507.1| stage III sporulation protein AA [Bacillus cereus VDM034]
Length = 308
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP +R ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKAMRQLVEGCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP G R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|148379856|ref|YP_001254397.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
3502]
gi|153932422|ref|YP_001384153.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
19397]
gi|153935244|ref|YP_001387694.1| stage III sporulation protein AA [Clostridium botulinum A str.
Hall]
gi|168180483|ref|ZP_02615147.1| stage III sporulation protein AA [Clostridium botulinum NCTC 2916]
gi|226949193|ref|YP_002804284.1| stage III sporulation protein AA [Clostridium botulinum A2 str.
Kyoto]
gi|148289340|emb|CAL83436.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
3502]
gi|152928466|gb|ABS33966.1| stage III sporulation protein AA [Clostridium botulinum A str. ATCC
19397]
gi|152931158|gb|ABS36657.1| stage III sporulation protein AA [Clostridium botulinum A str.
Hall]
gi|182668758|gb|EDT80736.1| stage III sporulation protein AA [Clostridium botulinum NCTC 2916]
gi|226844597|gb|ACO87263.1| stage III sporulation protein AA [Clostridium botulinum A2 str.
Kyoto]
Length = 307
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 178
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVE 258
Query: 239 NIIKNPILSDLI 250
+I P+ +++
Sbjct: 259 DIYNRPVFKEIV 270
>gi|229135016|ref|ZP_04263821.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST196]
gi|228648401|gb|EEL04431.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST196]
Length = 308
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP +R ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKAMRQLVECCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP G R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|291536399|emb|CBL09511.1| stage III sporulation protein AA [Roseburia intestinalis M50/1]
Length = 318
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 74 GDNRAGIEGTLHR----ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---L 126
G +R GI G + + I+ I+ I + RV G + + L G+SI L
Sbjct: 104 GGHRVGIAGEIAKDREGITGIKY----ISFMNIRVAHEKKGCAEKILPFLKDGESIYNTL 159
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQ 181
V +PG GKTT +R+ R LS+ + ++ +VD +EI IP + +G R
Sbjct: 160 LVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGIPQNDMGI--RTD 217
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + M+ + + P++I VDE+G + + A A GV ++GT H + +E +
Sbjct: 218 VLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRILGTVHADTVEELW 277
Query: 242 KNPIL 246
+ P L
Sbjct: 278 EKPYL 282
>gi|423457622|ref|ZP_17434419.1| stage III sporulation protein AA [Bacillus cereus BAG5X2-1]
gi|401148006|gb|EJQ55499.1| stage III sporulation protein AA [Bacillus cereus BAG5X2-1]
Length = 308
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKRLVESCKQYDALEEIRVRIGRPLECIAHGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 122 AEPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP G R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 182 AGCVKGIPQYDFGA--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|423615466|ref|ZP_17591300.1| stage III sporulation protein AA [Bacillus cereus VD115]
gi|401260003|gb|EJR66176.1| stage III sporulation protein AA [Bacillus cereus VD115]
Length = 308
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + + E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKQYDTLEEIRVRIGRPLECIAHGEV---FFYDYIATAEDASYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ +F G +R G+ G + + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+V+IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYEFGT--RLDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG +++ K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVEKRPSLQAVL 267
>gi|228910029|ref|ZP_04073849.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 200]
gi|228849546|gb|EEM94380.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 200]
Length = 308
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E G+ F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKYLIEECKQYDALEEIRVRIGRPLECIAHGKVFFYDYITTAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLAYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG E+++K P L ++
Sbjct: 239 VHAGVQLFISAHGFSYEDVVKRPSLKAVL 267
>gi|154483666|ref|ZP_02026114.1| hypothetical protein EUBVEN_01370 [Eubacterium ventriosum ATCC
27560]
gi|149735576|gb|EDM51462.1| putative stage III sporulation protein AA [Eubacterium ventriosum
ATCC 27560]
Length = 283
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 68/126 (53%), Gaps = 3/126 (2%)
Query: 113 DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG-DIPH 171
++V ++ +++L + PG+GKTT++R I R S+ V +VD NEIGG +P
Sbjct: 130 ELVNKIVEEKENLLIISPPGLGKTTLLRNIIRGYSNLKGINVTVVDERNEIGGSYRGVPM 189
Query: 172 SAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 231
+G R V ++ ++ A+ + P+VI VDEIG+ A+ A GV ++ T
Sbjct: 190 INLGL--RTDVISDCTKYSGIVMAIRSMAPKVIAVDEIGSGADFKAIEYAVNSGVSVVAT 247
Query: 232 AHGEWL 237
HG+ L
Sbjct: 248 IHGKDL 253
>gi|404371401|ref|ZP_10976707.1| stage III sporulation protein AA [Clostridium sp. 7_2_43FAA]
gi|226912470|gb|EEH97671.1| stage III sporulation protein AA [Clostridium sp. 7_2_43FAA]
Length = 300
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 69/132 (52%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 178
L V P GKTT++R+IA+ +S K+V I+D +EI + +P +G
Sbjct: 135 LIVSPPKCGKTTILRDIAKNISTGMPIVNLKGKKVSIIDERSEIAACFNGVPQLDVGI-- 192
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R + + L+ MI A+ + P+++I DEIGT+ + A GV +I T HG +E
Sbjct: 193 RSDILDNCLKKDGMIMAIRSLSPDILICDEIGTDGDIEALHMAFNSGVNIIVTIHGYSIE 252
Query: 239 NIIKNPILSDLI 250
++ K + DL+
Sbjct: 253 DVYKRKVFKDLL 264
>gi|240145623|ref|ZP_04744224.1| stage III sporulation protein AA [Roseburia intestinalis L1-82]
gi|257202285|gb|EEV00570.1| stage III sporulation protein AA [Roseburia intestinalis L1-82]
Length = 318
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 74 GDNRAGIEGTLHR----ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---L 126
G +R GI G + + I+ I+ I + RV G + + L G+SI L
Sbjct: 104 GGHRVGIAGEIAKDREGITGIKY----ISFMNIRVAHEKKGCAEKILPFLKDGESIYNTL 159
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQ 181
V +PG GKTT +R+ R LS+ + ++ +VD +EI IP + +G R
Sbjct: 160 LVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGIPQNDMGI--RTD 217
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + M+ + + P++I VDE+G + + A A GV ++GT H + +E +
Sbjct: 218 VLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRILGTVHADTVEELW 277
Query: 242 KNPIL 246
+ P L
Sbjct: 278 EKPYL 282
>gi|255100207|ref|ZP_05329184.1| stage III sporulation protein AA [Clostridium difficile QCD-63q42]
Length = 322
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSDEFQK 152
I L RV R + G D + + GK+ L + P GKTT++R+I R LS+ +
Sbjct: 125 ISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNED 184
Query: 153 ------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
+V +VD NEI G +P +G R + E + + + + P VI+
Sbjct: 185 YGFKGLKVALVDERNEIAGSYLGVPQMDVGI--RTDIIETCPKDLGITMLLRSMSPNVIV 242
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
DEIG+E E A + G+ LI T HG+ +E+I
Sbjct: 243 TDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDI 277
>gi|219854458|ref|YP_002471580.1| hypothetical protein CKR_1115 [Clostridium kluyveri NBRC 12016]
gi|219568182|dbj|BAH06166.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 308
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 31/270 (11%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEV--------ILDLGR-------LPEARYLGEFGGKY 51
I+P +L+ L + K L E+ I+ LGR +P+ L +
Sbjct: 9 ILNIIPENLKRALGDLIKSPDLQEIRIRTNKPLIMQLGRKEVVVQYIPKLEDLKVIVQRM 68
Query: 52 LRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ + EE E Q + GG +R GI G + + +++ K I + R+ R + G
Sbjct: 69 SNYSIYAFEE-EIKQGYITIRGG-HRVGICGRCIIEKNEVKTIKD-IASINIRICREIIG 125
Query: 111 HIDMVYD-LLHYGKSI--LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSN 161
D + +L K I + + P GKTT++R+I R +S + K+V ++D +
Sbjct: 126 CSDSIMKFILKKDKVINTIIISPPKCGKTTLIRDIVRNISQGIKNVGLTGKKVCVIDERS 185
Query: 162 EIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 220
EIG + +P +G R + + + + +I A+ + PEVI+ DEIGT + + +
Sbjct: 186 EIGACFNGMPQLNVGM--RTDILDGCPKSQGIIMAIRSMSPEVIVCDEIGTYKDMDSILT 243
Query: 221 IAERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV LI T HG E++ P+ +++
Sbjct: 244 ALNSGVNLITTIHGYGTEDLYSRPVFKEIV 273
>gi|153953843|ref|YP_001394608.1| stage III sporulation protein AA [Clostridium kluyveri DSM 555]
gi|146346724|gb|EDK33260.1| Predicted stage III sporulation protein AA [Clostridium kluyveri
DSM 555]
Length = 305
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 124/270 (45%), Gaps = 31/270 (11%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEV--------ILDLGR-------LPEARYLGEFGGKY 51
I+P +L+ L + K L E+ I+ LGR +P+ L +
Sbjct: 6 ILNIIPENLKRALGDLIKSPDLQEIRIRTNKPLIMQLGRKEVVVQYIPKLEDLKVIVQRM 65
Query: 52 LRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ + EE E Q + GG +R GI G + + +++ K I + R+ R + G
Sbjct: 66 SNYSIYAFEE-EIKQGYITIRGG-HRVGICGRCIIEKNEVKTIKD-IASINIRICREIIG 122
Query: 111 HIDMVYD-LLHYGKSI--LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSN 161
D + +L K I + + P GKTT++R+I R +S + K+V ++D +
Sbjct: 123 CSDSIMKFILKKDKVINTIIISPPKCGKTTLIRDIVRNISQGIKNVGLTGKKVCVIDERS 182
Query: 162 EIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 220
EIG + +P +G R + + + + +I A+ + PEVI+ DEIGT + + +
Sbjct: 183 EIGACFNGMPQLNVGM--RTDILDGCPKSQGIIMAIRSMSPEVIVCDEIGTYKDMDSILT 240
Query: 221 IAERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV LI T HG E++ P+ +++
Sbjct: 241 ALNSGVNLITTIHGYGTEDLYSRPVFKEIV 270
>gi|169335050|ref|ZP_02862243.1| hypothetical protein ANASTE_01456 [Anaerofustis stercorihominis DSM
17244]
gi|169257788|gb|EDS71754.1| stage III sporulation protein AA [Anaerofustis stercorihominis DSM
17244]
Length = 304
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/180 (31%), Positives = 93/180 (51%), Gaps = 16/180 (8%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGK--SIL 126
G +R G G++ +++ +R+ I L R+ R + G ++V + +L+ G+ + L
Sbjct: 90 GGHRIGFSGSVIMEDNKVIGLRN----INSLNIRISRQIIGASNLVLNYILNKGEVYNTL 145
Query: 127 FVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+ P VGKTT++R+I+RV+S D KRV IVD EI D + + + V
Sbjct: 146 IISPPKVGKTTLLRDISRVISTNKGDFVGKRVCIVDERKEIASLHD-GVNELNIGDKTDV 204
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
E + M V PEVII DEIG + A + GV +I +AHG+ +++I++
Sbjct: 205 LEGINKSDGMNMLVRAMSPEVIITDEIGKIDDISALENSVLSGVKVISSAHGKDMKDILR 264
>gi|403386589|ref|ZP_10928646.1| stage III sporulation protein AA [Clostridium sp. JC122]
Length = 251
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 98/191 (51%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGR-AVSGHIDMVYDLLHYGK--SIL 126
G +R GI GT+ +++ I++ IV + RV + ++ ++ +L G+ + +
Sbjct: 29 GGHRVGICGTVVTEDNKVKTIKN----IVSINIRVAKEIINCSKTIIPYILQEGEILNTI 84
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARR 179
+ P GKTT++R+I R++S+ K V ++D +EI IP IG R
Sbjct: 85 IISPPKCGKTTILRDICRIVSNGNYTLNLKGKNVSVIDERSEIAACFKGIPQMNIG--ER 142
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + + + +I A+ + PEV+I DEIGT + + + GV LI T HG +++
Sbjct: 143 TDVLDSCPKSEGIIMAIRSMSPEVVICDEIGTYKDMDSIIAALNSGVKLITTIHGFDIDD 202
Query: 240 IIKNPILSDLI 250
+ K P+ +++
Sbjct: 203 LYKRPVFREVM 213
>gi|225573674|ref|ZP_03782429.1| hypothetical protein RUMHYD_01870 [Blautia hydrogenotrophica DSM
10507]
gi|225038967|gb|EEG49213.1| stage III sporulation protein AA [Blautia hydrogenotrophica DSM
10507]
Length = 311
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 91/189 (48%), Gaps = 19/189 (10%)
Query: 74 GDNRAGIEG----TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---L 126
G +R G+ G + R+ +R I L R+ G D V+ + YGK + L
Sbjct: 99 GGHRVGVAGRTVLSGKRVDGMRD----ISCLNLRLAHEKKGCADSVFSWV-YGKEVAHTL 153
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQ 181
+ P GKTT++R++ R +S+ + V +VD +EI G I + +G R
Sbjct: 154 IISPPRCGKTTLLRDLIRQISNGTSSCPGRTVGVVDERSEIAGCYQGIAQNDVGI--RTD 211
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + + M+ + + P+V+ VDE+G + HA S+ G L+ T HG LE++
Sbjct: 212 VLDGCPKAEGMMMLIRSMAPQVVAVDELGDYEDIHAIESVVHCGCKLLATVHGNSLEDLR 271
Query: 242 KNPILSDLI 250
+ P+ L+
Sbjct: 272 RKPLFQRLM 280
>gi|229086768|ref|ZP_04218932.1| Stage III sporulation protein AA [Bacillus cereus Rock3-44]
gi|228696543|gb|EEL49364.1| Stage III sporulation protein AA [Bacillus cereus Rock3-44]
Length = 308
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 120/268 (44%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ ++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKHMKQFIEGCEQYNTLEEIRVRIGRPLECIAHGEV---FFYDYVVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ ++ G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQYSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S R V IVD +EI
Sbjct: 122 AEPLLPYLYSARWLNTMVIGPPQTGKTTLLRDVARCMSQGVYSREIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP G R+ V + + + M+ + + P+++IVDEIG ++ A
Sbjct: 182 AGCVKGIPQYEFGP--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRMEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSFDDVMKRPSLKAVM 267
>gi|194016755|ref|ZP_03055368.1| stage III sporulation protein AA [Bacillus pumilus ATCC 7061]
gi|194011361|gb|EDW20930.1| stage III sporulation protein AA [Bacillus pumilus ATCC 7061]
Length = 307
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 87/187 (46%), Gaps = 13/187 (6%)
Query: 72 FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSG----HIDMVYDLLHYGKSILF 127
G +R G+ G + + I I R+ + G + +YD + + L
Sbjct: 84 ISGGHRVGLAGKVIVENGIVKGLRDISSFNIRIAKEKVGIALPFLPYLYD--EHWCNTLI 141
Query: 128 VGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQV 182
+G P GKTT++R+IAR+ S + K+ I+D +EI G +P G R+ V
Sbjct: 142 IGPPQTGKTTLLRDIARLASTGTKAIPPKKTGIIDERSEIAGCIRGVPQHQFG--HRVDV 199
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + + ++ + + PEV+IVDEIG + A GV +I + HG LEN+ K
Sbjct: 200 LDACPKAEGLMMMIRSMSPEVMIVDEIGKSEDVQALLEAIHAGVTIIVSVHGYSLENVYK 259
Query: 243 NPILSDL 249
P L L
Sbjct: 260 RPSLKPL 266
>gi|384182023|ref|YP_005567785.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
finitimus YBT-020]
gi|324328107|gb|ADY23367.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
finitimus YBT-020]
Length = 308
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKTMKQLVESCKCCDALEEIRVRIGRPLECIAQGEV---FFYDYIVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ F G +R G+ G + + + R+ R G
Sbjct: 63 LSHFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLKAVL 267
>gi|291538735|emb|CBL11846.1| stage III sporulation protein AA [Roseburia intestinalis XB6B4]
Length = 269
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 89/185 (48%), Gaps = 18/185 (9%)
Query: 74 GDNRAGIEGTLHR----ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---L 126
G +R GI G + + I+ I+ I + RV G + + L G+SI L
Sbjct: 55 GGHRVGIAGEIAKDREGITGIKY----ISFMNIRVAHEKKGCAEKILPFLKDGESIYNTL 110
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQ 181
V +PG GKTT +R+ R LS+ + ++ +VD +EI IP + +G R
Sbjct: 111 LVSKPGAGKTTCLRDCIRSLSNGKEGWEGMKICVVDERSEIAACHLGIPQNDMGI--RTD 168
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + M+ + + P++I VDE+G + + A A GV ++GT H + +E +
Sbjct: 169 VLSGCGKSEGMMLMLRSMSPQIIAVDELGGKKDFQAVEQAACSGVRILGTVHADTVEELW 228
Query: 242 KNPIL 246
+ P L
Sbjct: 229 EKPYL 233
>gi|228992941|ref|ZP_04152865.1| Stage III sporulation protein AA [Bacillus pseudomycoides DSM
12442]
gi|228766798|gb|EEM15437.1| Stage III sporulation protein AA [Bacillus pseudomycoides DSM
12442]
Length = 308
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 122/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ ++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKAMKQFIEGCEQYSALEEIRVRIGRQLECIARGEV---FFYDYVVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ ++ G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQYSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S + +V IVD +EI
Sbjct: 122 AEPLLSYLYDSRWLNTMVIGPPQTGKTTLLRDVARCMSQGVRSHEIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP G +R+ V + + + M+ + + P+V+IVDEIG ++ A
Sbjct: 182 AGCVKGIPQYEFG--QRVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRVEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSFDDVMKRPSLKAVM 267
>gi|160893216|ref|ZP_02074004.1| hypothetical protein CLOL250_00762 [Clostridium sp. L2-50]
gi|156865299|gb|EDO58730.1| stage III sporulation protein AA [Clostridium sp. L2-50]
Length = 337
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/209 (27%), Positives = 95/209 (45%), Gaps = 11/209 (5%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVS 109
+Y+ + + E E Q + GG +R G+ G + S + I + R+ V
Sbjct: 79 EYISNYSLYAYEDEIRQGFITIQGG-HRVGLAGKVILESGMIKSVRHISFINIRLSHQVK 137
Query: 110 GHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 162
G V + G L + P GKTT++R++ R+LSD F + +VD +E
Sbjct: 138 GCCKKVLPYIINGNETFHTLIISPPRCGKTTLLRDMIRMLSDGFPGFKGNTIGVVDERSE 197
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
IG +P + IG R + + + M+ + + P++I VDEIG+ + A S+
Sbjct: 198 IGACYKGVPQNDIGI--RTDILDCCPKSYGMLMLIRSMSPQIIAVDEIGSRDDIDAIYSV 255
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
G LI T HG +++I P L L+
Sbjct: 256 INCGCKLIATVHGNSIDDIRNRPGLRKLV 284
>gi|423448777|ref|ZP_17425656.1| stage III sporulation protein AA [Bacillus cereus BAG5O-1]
gi|401129371|gb|EJQ37054.1| stage III sporulation protein AA [Bacillus cereus BAG5O-1]
Length = 308
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 62/267 (23%), Positives = 117/267 (43%), Gaps = 30/267 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ +++ + L E+ + +GR E GE + E+ Y +
Sbjct: 6 EVLPKMMKQLVESCKQYNTLEEIRVRIGRPLECIAHGEV---CFYDYIATAEDASYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHI 112
+ +F G +R G+ G + + + R+ R G
Sbjct: 63 LSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIA 122
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIG 164
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +EI
Sbjct: 123 EPLLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGTSKIPSCKVGIVDERSEIA 182
Query: 165 GD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE 223
G IP GT R+ V + + + M+ + + P+V+IVDEIG + ++ A
Sbjct: 183 GCVKGIPQYEFGT--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVH 240
Query: 224 RGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 241 AGVQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|346722887|ref|YP_001180908.2| AAA ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
gi|345106858|gb|ABP67717.2| AAA ATPase [Caldicellulosiruptor saccharolyticus DSM 8903]
Length = 248
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 93/183 (50%), Gaps = 21/183 (11%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSG-HIDMVYDLLHYGKSI--- 125
G +R G+ G RI ++ S I GL RV +++ G I ++ +L+ KSI
Sbjct: 36 GGHRIGVAGKFTSDGKRIISLNS----ITGLNIRVAKSIEGIGIKVIKHILNPSKSIYNT 91
Query: 126 LFVGRPGVGKTTVMREIARVLSD-----EFQK-RVVIVDTSNEIGGDGDIPHSAIGTARR 179
L V PG GKTT++R+I R+LS+ F RVV++D +EI S +GT R
Sbjct: 92 LIVSPPGCGKTTLLRDIVRILSNGEINLSFGGFRVVVIDERSEISTYSQ-EQSKLGT--R 148
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + + + A+ + P++I +DE+G + A ++ GV +I T HGE L
Sbjct: 149 TFVLDGVDKLNGVFMAIRSLNPQIIAMDELGGPQDYLAVAEASKMGVKVIATMHGENLHE 208
Query: 240 IIK 242
+ K
Sbjct: 209 LKK 211
>gi|304407059|ref|ZP_07388713.1| stage III sporulation protein AA [Paenibacillus curdlanolyticus
YK9]
gi|304344046|gb|EFM09886.1| stage III sporulation protein AA [Paenibacillus curdlanolyticus
YK9]
Length = 357
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/190 (32%), Positives = 89/190 (46%), Gaps = 21/190 (11%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL-----HYGKSILF 127
G +R G+ G T+ +RS + I G R+ R V+G D LL S L
Sbjct: 99 GGHRIGLAGRTVLEDGKVRSIRD-IGGFNVRIARDVAGAADSTLPLLLDRTRRSIASTLV 157
Query: 128 VGRPGVGKTTVMREIARVLS----------DEFQKRVVIVDTSNEIGGD-GDIPHSAIGT 176
VG P GKTT +R++AR +S ++V IVD +EI +P +G
Sbjct: 158 VGAPRQGKTTFIRDLARSISYGRWRSTAAAGWPGRKVGIVDERSEIAASVRGVPTFDVGP 217
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH-GE 235
R V + + + M+ + + PEV+IVDEIG E + A R GV +I TAH G+
Sbjct: 218 --RTDVMDACPKAEGMMMMIRSMSPEVLIVDEIGREEDVEAIREAVRAGVSVIATAHAGD 275
Query: 236 WLENIIKNPI 245
W E + I
Sbjct: 276 WQEAAARPAI 285
>gi|423489380|ref|ZP_17466062.1| stage III sporulation protein AA [Bacillus cereus BtB2-4]
gi|423495103|ref|ZP_17471747.1| stage III sporulation protein AA [Bacillus cereus CER057]
gi|423498103|ref|ZP_17474720.1| stage III sporulation protein AA [Bacillus cereus CER074]
gi|423598486|ref|ZP_17574486.1| stage III sporulation protein AA [Bacillus cereus VD078]
gi|401151196|gb|EJQ58648.1| stage III sporulation protein AA [Bacillus cereus CER057]
gi|401161390|gb|EJQ68757.1| stage III sporulation protein AA [Bacillus cereus CER074]
gi|401236756|gb|EJR43213.1| stage III sporulation protein AA [Bacillus cereus VD078]
gi|402431616|gb|EJV63680.1| stage III sporulation protein AA [Bacillus cereus BtB2-4]
Length = 308
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVEGCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGISASKIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP G R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|153816458|ref|ZP_01969126.1| hypothetical protein RUMTOR_02711 [Ruminococcus torques ATCC 27756]
gi|317500219|ref|ZP_07958450.1| stage III sporulation protein AA [Lachnospiraceae bacterium
8_1_57FAA]
gi|331087553|ref|ZP_08336484.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_46FAA]
gi|145846200|gb|EDK23118.1| stage III sporulation protein AA [Ruminococcus torques ATCC 27756]
gi|316898390|gb|EFV20430.1| stage III sporulation protein AA [Lachnospiraceae bacterium
8_1_57FAA]
gi|330400693|gb|EGG80297.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_46FAA]
Length = 313
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 81/162 (50%), Gaps = 10/162 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSD--EFQ 151
I L R+ V G D + + K + L + P GKTT++R++ R +SD E+
Sbjct: 120 ISSLNIRIAHEVIGCADELIPYITKNKKVCHTLIISPPRCGKTTLLRDLIRQISDGNEYV 179
Query: 152 K--RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
K V +VD +EIGG I + +G R V + + + MI + + P+V+ VDE
Sbjct: 180 KGCSVGVVDERSEIGGCYMGIVQNNLGM--RTDVLDCCPKAEGMIMLIRSMSPQVVAVDE 237
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
IGT + HA + G LI + HG +E + P+L ++I
Sbjct: 238 IGTAEDIHAIEYAMQCGCKLIASVHGMDMEEAARKPVLGEMI 279
>gi|332799361|ref|YP_004460860.1| stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|438002504|ref|YP_007272247.1| Stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|332697096|gb|AEE91553.1| stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
gi|432179298|emb|CCP26271.1| Stage III sporulation protein AA [Tepidanaerobacter acetatoxydans
Re1]
Length = 340
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/227 (28%), Positives = 104/227 (45%), Gaps = 31/227 (13%)
Query: 72 FGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGKSI--LF 127
G +R G G L I++ K I G R+ R V G D V +++ GK++ L
Sbjct: 110 LSGGHRVGFSGRVLLENENIKTIK-YISGFNIRIAREVIGAADKVLPFIINGGKALNTLI 168
Query: 128 VGRPGVGKTTVMREIARVLS---DEFQKR---VVIVDTSNEIGGDGD-IPHSAIGTARRM 180
+ P GKTT++R+I R LS DEF + + +VD +EI + IP + +G R
Sbjct: 169 ISPPKAGKTTLLRDIIRQLSSGVDEFGIKGFNIGLVDERSEIACCYEGIPQNDVGI--RT 226
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + K ++ + + P++I DEIG + A GV +I TAHG L++I
Sbjct: 227 DVLDSCPKAKGIMLLLRSMSPDIIATDEIGRNEDVIAIEEAINTGVTIITTAHGSDLDDI 286
Query: 241 IKNPILSDLI-----------------GGVDTVTLGDEEARARRCQK 270
+ P + LI G ++ + G+ +C+K
Sbjct: 287 RRRPTIRKLINKGFFDRYIILGTSSGVGSIEAILKGNNFENIYKCKK 333
>gi|424836158|ref|ZP_18260815.1| stage III sporulation protein AA [Clostridium sporogenes PA 3679]
gi|365977560|gb|EHN13659.1| stage III sporulation protein AA [Clostridium sporogenes PA 3679]
Length = 307
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL--- 126
G +R GI G ++ IR I L R+ R + +V + +L
Sbjct: 86 GGHRVGICGRCVIDGGKVKTIRD----ISSLNIRICREIYNASKLVMPYIVENGQVLNTI 141
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I++ +SD ++V ++D +EI G + +P +G R
Sbjct: 142 IISPPKCGKTTIIRDISKKISDGVDSLNLKGQKVSVIDERSEIAGSYNGVPQLDVGL--R 199
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E+
Sbjct: 200 TDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYKDVESILIALNSGVSLITTIHGFGVED 259
Query: 240 IIKNPILSDLI 250
I P+ +++
Sbjct: 260 IYNRPVFKEIV 270
>gi|423452500|ref|ZP_17429353.1| stage III sporulation protein AA [Bacillus cereus BAG5X1-1]
gi|401140138|gb|EJQ47695.1| stage III sporulation protein AA [Bacillus cereus BAG5X1-1]
Length = 308
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 121/265 (45%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVEGCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYETRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP G R+ V + + + M+ + + P+V+IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGA--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|187779500|ref|ZP_02995973.1| hypothetical protein CLOSPO_03096 [Clostridium sporogenes ATCC
15579]
gi|187773125|gb|EDU36927.1| stage III sporulation protein AA [Clostridium sporogenes ATCC
15579]
Length = 310
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL--- 126
G +R GI G ++ IR I L R+ R + +V + +L
Sbjct: 89 GGHRVGICGRCVIDGGKVKTIRD----ISSLNIRICREIYNASKLVMPYIVENGQVLNTI 144
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I++ +SD ++V ++D +EI G + +P +G R
Sbjct: 145 IISPPKCGKTTIIRDISKKISDGVDALNLKGQKVSVIDERSEIAGSYNGVPQLDVGL--R 202
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + + + ++ A+ + PEVII DEIGT + + GV LI T HG +E+
Sbjct: 203 TDVLDNCPKSEGIVMAIRSMAPEVIICDEIGTYKDVESILIALNSGVSLITTIHGFGVED 262
Query: 240 IIKNPILSDLI 250
I P+ +++
Sbjct: 263 IYNRPVFKEIV 273
>gi|229013411|ref|ZP_04170548.1| Stage III sporulation protein AA [Bacillus mycoides DSM 2048]
gi|423368248|ref|ZP_17345680.1| stage III sporulation protein AA [Bacillus cereus VD142]
gi|423512308|ref|ZP_17488839.1| stage III sporulation protein AA [Bacillus cereus HuA2-1]
gi|423660956|ref|ZP_17636125.1| stage III sporulation protein AA [Bacillus cereus VDM022]
gi|423674015|ref|ZP_17648954.1| stage III sporulation protein AA [Bacillus cereus VDM062]
gi|228747823|gb|EEL97689.1| Stage III sporulation protein AA [Bacillus mycoides DSM 2048]
gi|401080999|gb|EJP89279.1| stage III sporulation protein AA [Bacillus cereus VD142]
gi|401300997|gb|EJS06586.1| stage III sporulation protein AA [Bacillus cereus VDM022]
gi|401309566|gb|EJS14899.1| stage III sporulation protein AA [Bacillus cereus VDM062]
gi|402449279|gb|EJV81116.1| stage III sporulation protein AA [Bacillus cereus HuA2-1]
Length = 308
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 121/265 (45%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVEGCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
E + G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP G R+ V + + + M+ + + P+++IVDEIG + ++ A G
Sbjct: 185 VKGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++++K P L ++
Sbjct: 243 VQLFISAHGFSYDDVVKRPSLQAVL 267
>gi|423634977|ref|ZP_17610630.1| stage III sporulation protein AA [Bacillus cereus VD156]
gi|401278963|gb|EJR84893.1| stage III sporulation protein AA [Bacillus cereus VD156]
Length = 308
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E G+ F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKYLIEECKQYDALEEIRVRIGRPLECIAHGKVFFYDYITTAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSSKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG E++++ P L ++
Sbjct: 239 VHAGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|168184581|ref|ZP_02619245.1| stage III sporulation protein AA [Clostridium botulinum Bf]
gi|237795310|ref|YP_002862862.1| stage III sporulation protein AA [Clostridium botulinum Ba4 str.
657]
gi|182672334|gb|EDT84295.1| stage III sporulation protein AA [Clostridium botulinum Bf]
gi|229261521|gb|ACQ52554.1| stage III sporulation protein AA [Clostridium botulinum Ba4 str.
657]
Length = 307
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 90/191 (47%), Gaps = 20/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL--- 126
G +R GI G ++ IR I L R+ R + +V + +L
Sbjct: 86 GGHRVGICGRCVIDEGKVKTIRD----ISSLNIRICREIYNASKLVMPYIVENGQVLNTI 141
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
+ P GKTT++R+I++ +SD K+V ++D +EI G + +P +G R
Sbjct: 142 IISPPKCGKTTIIRDISKKISDGVDALSLKGKKVSVIDERSEIAGSYNGVPQLDVGL--R 199
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
V + + + ++ A+ + PEV+I DEIGT + + GV LI T HG +E+
Sbjct: 200 TDVLDNCPKSEGIVMAIRSMAPEVMICDEIGTYNDVESILIALNSGVSLITTIHGFGVED 259
Query: 240 IIKNPILSDLI 250
I P+ +++
Sbjct: 260 IYNRPVFKEIV 270
>gi|218899357|ref|YP_002447768.1| stage III sporulation protein AA [Bacillus cereus G9842]
gi|228902712|ref|ZP_04066859.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 4222]
gi|228967235|ref|ZP_04128271.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|402564392|ref|YP_006607116.1| stage III sporulation protein AA [Bacillus thuringiensis HD-771]
gi|423358766|ref|ZP_17336269.1| stage III sporulation protein AA [Bacillus cereus VD022]
gi|423561330|ref|ZP_17537606.1| stage III sporulation protein AA [Bacillus cereus MSX-A1]
gi|434377318|ref|YP_006611962.1| stage III sporulation protein AA [Bacillus thuringiensis HD-789]
gi|218541836|gb|ACK94230.1| stage III sporulation protein AA [Bacillus cereus G9842]
gi|228792604|gb|EEM40170.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
sotto str. T04001]
gi|228856899|gb|EEN01412.1| Stage III sporulation protein AA [Bacillus thuringiensis IBL 4222]
gi|401084638|gb|EJP92884.1| stage III sporulation protein AA [Bacillus cereus VD022]
gi|401201587|gb|EJR08452.1| stage III sporulation protein AA [Bacillus cereus MSX-A1]
gi|401793044|gb|AFQ19083.1| stage III sporulation protein AA [Bacillus thuringiensis HD-771]
gi|401875875|gb|AFQ28042.1| stage III sporulation protein AA [Bacillus thuringiensis HD-789]
Length = 308
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E G+ F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKYLIEECEQYDALEEIRVRIGRPLECIAHGKVFFYDYITTAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG E++++ P L ++
Sbjct: 239 VHAGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|423591808|ref|ZP_17567839.1| stage III sporulation protein AA [Bacillus cereus VD048]
gi|401231941|gb|EJR38443.1| stage III sporulation protein AA [Bacillus cereus VD048]
Length = 308
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVEGCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMV 115
E + G +R G+ G + + + R+ R G + +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIAEPL 125
Query: 116 YDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD- 166
L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 126 LPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCV 185
Query: 167 GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
IP G R+ V + + + M+ + + P+V+IVDEIG + ++ A GV
Sbjct: 186 KGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGV 243
Query: 227 MLIGTAHGEWLENIIKNPILSDLI 250
L +AHG ++++K P L ++
Sbjct: 244 QLFISAHGFSYDDVVKRPSLQAVL 267
>gi|302387582|ref|YP_003823404.1| stage III sporulation protein AA [Clostridium saccharolyticum WM1]
gi|302198210|gb|ADL05781.1| stage III sporulation protein AA [Clostridium saccharolyticum WM1]
Length = 335
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 100/211 (47%), Gaps = 14/211 (6%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ + + E E Q + GG +R GI G T+ S I++ K I + R+ V
Sbjct: 77 EYMSNYSLYAFEEEMKQGFITIQGG-HRIGIAGKTILDESGIKAMK-YISFINVRLSHQV 134
Query: 109 SGHIDMVYDLLHY-GKSI---LFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTS 160
G V L+ G+ I L + P GKTT++R++ R +S D V +VD
Sbjct: 135 KGCASQVLPYLYEEGREIYHTLIISPPRCGKTTLLRDMIRQVSNGTEDHTGLTVGVVDER 194
Query: 161 NEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACR 219
+EIG +P + +G R + + + K M+ + P VI VDEIG+ + A
Sbjct: 195 SEIGACYQGVPQNELGI--RTDILDCCPKAKGMMMLIRTMSPRVIAVDEIGSREDLEAME 252
Query: 220 SIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ G LI T HG ++++ + P+L L+
Sbjct: 253 YVMNCGCKLIATVHGNSIDDLKQKPVLRKLV 283
>gi|229168937|ref|ZP_04296654.1| Stage III sporulation protein AA [Bacillus cereus AH621]
gi|228614529|gb|EEK71637.1| Stage III sporulation protein AA [Bacillus cereus AH621]
Length = 308
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVEGCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDTIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMV 115
E + G +R G+ G + + + R+ R G + +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIAEPL 125
Query: 116 YDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD- 166
L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 126 LPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCV 185
Query: 167 GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
IP G R+ V + + + M+ + + P+V+IVDEIG + ++ A GV
Sbjct: 186 KGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRKEDSEAIMEAVHAGV 243
Query: 227 MLIGTAHGEWLENIIKNPILSDLI 250
L +AHG ++++K P L ++
Sbjct: 244 QLFISAHGFSYDDVVKRPSLQAVL 267
>gi|126698788|ref|YP_001087685.1| stage III sporulation protein AA [Clostridium difficile 630]
gi|255306096|ref|ZP_05350268.1| stage III sporulation protein AA [Clostridium difficile ATCC 43255]
gi|423090770|ref|ZP_17079056.1| stage III sporulation protein AA [Clostridium difficile
70-100-2010]
gi|115250225|emb|CAJ68046.1| Stage III sporulation protein AA [Clostridium difficile 630]
gi|357555885|gb|EHJ37507.1| stage III sporulation protein AA [Clostridium difficile
70-100-2010]
Length = 322
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSDEFQK 152
I L RV R + G D + + GK+ L + P GKTT++R+I R LS+ +
Sbjct: 125 ISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNED 184
Query: 153 ------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
+V +VD NEI G +P +G R + E + + + + P VI+
Sbjct: 185 YGFKGLKVALVDERNEIAGAYLGVPQMDVGI--RTDIIETCPKDLGITMLLRSMSPNVIV 242
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
DEIG+E E A + G+ LI T HG+ +E+I
Sbjct: 243 TDEIGSEKEIKALYTALNGGIGLITTVHGDSIEDI 277
>gi|326790836|ref|YP_004308657.1| stage III sporulation protein AA [Clostridium lentocellum DSM 5427]
gi|326541600|gb|ADZ83459.1| stage III sporulation protein AA [Clostridium lentocellum DSM 5427]
Length = 314
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 12/186 (6%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVG 129
G +R G+ G + S I++ K I G+ R+ V G V + + L +
Sbjct: 98 GGHRVGLVGKAVLEQSHIKTLK-YISGMNIRIAHEVIGCSQKVMPYILSRDKVYHTLIIS 156
Query: 130 RPGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPE 184
PG GKTT++R++ R LS+ F V +VD +EI +P + +G+ +
Sbjct: 157 PPGCGKTTLLRDMIRYLSEGFCGYGPYTVGVVDERSEIAACYQGVPQNRMGSRTDVLDGC 216
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
P ++ M+ + + P+VI VDEIG + A I GV L+ T HG+ +E+ ++ P
Sbjct: 217 PKVEGMRML--LRSMAPQVIAVDEIGKADDCTALEEILNVGVSLLCTVHGKNIEDCLRRP 274
Query: 245 ILSDLI 250
IL +L+
Sbjct: 275 ILKELL 280
>gi|228998985|ref|ZP_04158567.1| Stage III sporulation protein AA [Bacillus mycoides Rock3-17]
gi|229006532|ref|ZP_04164170.1| Stage III sporulation protein AA [Bacillus mycoides Rock1-4]
gi|228754718|gb|EEM04125.1| Stage III sporulation protein AA [Bacillus mycoides Rock1-4]
gi|228760602|gb|EEM09566.1| Stage III sporulation protein AA [Bacillus mycoides Rock3-17]
Length = 308
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/268 (23%), Positives = 121/268 (45%), Gaps = 32/268 (11%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSA 68
++LP ++ ++ + L E+ + +GR E GE + V+ E+ Y +
Sbjct: 6 EVLPKAMKQFIEGCEQYSALEEIRVRIGRPLECIARGEV---FFYDYVVTAEDAIYLLNK 62
Query: 69 VGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ ++ G +R G+ G + SA++ + + R+ R G
Sbjct: 63 LSQYSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIGI 121
Query: 112 IDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEI 163
+ + L+ + + + +G P GKTT++R++AR +S + +V IVD +EI
Sbjct: 122 AEPLLSYLYDSRWLNTMVIGPPQTGKTTLLRDVARCMSQGVRSHEIPSCKVGIVDERSEI 181
Query: 164 GGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G IP G R+ V + + + M+ + + P+V+IVDEIG ++ A
Sbjct: 182 AGCVKGIPQYEFGP--RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRVEDSEAIMEAV 239
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG ++++K P L ++
Sbjct: 240 HAGVQLFISAHGFSFDDVMKRPSLKAVM 267
>gi|404330166|ref|ZP_10970614.1| stage III sporulation protein AA [Sporolactobacillus vineae DSM
21990 = SL153]
Length = 315
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 111/258 (43%), Gaps = 32/258 (12%)
Query: 11 LPSDLRDRLQNDSKR-GQLLEVILDLG-------------RLPEARYLGEFGGKYLRSTE 56
+P D R L+ R GQ+ E+I G R A L + G L + E
Sbjct: 20 MPEDRRRNLEEIRLRTGQIPEIICSDGLWIDPDKKQRRFTRHDAAAMLQKISGYSLYTME 79
Query: 57 VSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVY 116
EEL V G +R G+ G + + R + R+ R G +
Sbjct: 80 ---EELRRGYITVR---GGHRIGLAGRVITENGRVRRLRDVAFFNVRIARQKIGAGRPLI 133
Query: 117 DLL---HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD- 166
D L H S LF+G P GKTT++R++AR +S+ +R + I+D +EI G
Sbjct: 134 DYLYQDHRWLSTLFIGAPQTGKTTLLRDLARFISNGLPERGIPGEKTGIIDERSEIAGCV 193
Query: 167 GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
G +P + +G R V + + + M+ + + P V+ VDEIG + A GV
Sbjct: 194 GGVPQNDVGP--RTDVLDACPKAEGMMMMIRSMSPGVLAVDEIGGREDMDALVEALNAGV 251
Query: 227 MLIGTAHGEWLENIIKNP 244
++ +AH L+ + K P
Sbjct: 252 TVLASAHAGSLDELRKRP 269
>gi|346306473|ref|ZP_08848629.1| stage III sporulation protein AA [Dorea formicigenerans 4_6_53AFAA]
gi|345897847|gb|EGX67744.1| stage III sporulation protein AA [Dorea formicigenerans 4_6_53AFAA]
Length = 316
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/208 (27%), Positives = 96/208 (46%), Gaps = 11/208 (5%)
Query: 51 YLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSG 110
Y+ + E E +Q + GG +R G+ G + I + R+ + G
Sbjct: 70 YISGYSLYSYEREMSQGYITIEGG-HRVGLSGQAIMENGRVKNLKYISSINVRMSHEILG 128
Query: 111 HIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLS--DEFQK--RVVIVDTSNEI 163
D + + + + + L V PG GKTT++R++ R +S +EF K V +VD +EI
Sbjct: 129 CADGLLPYITFHRRLYHTLLVSPPGCGKTTLLRDLIRQISEGNEFIKGMSVGVVDERSEI 188
Query: 164 GGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
G + + +G R V + + + MI + + PEVI VDEIG + HA
Sbjct: 189 AGCYRGVAQNHLGI--RTDVLDGCPKAEGMIMLIRSMRPEVIAVDEIGGSEDVHAIEYAM 246
Query: 223 ERGVMLIGTAHGEWLENIIKNPILSDLI 250
G ++ TAH + +E + K P+ LI
Sbjct: 247 HCGCRMLATAHADSMEELQKKPVFDRLI 274
>gi|228941354|ref|ZP_04103906.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228974286|ref|ZP_04134855.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228980879|ref|ZP_04141183.1| Stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|384188264|ref|YP_005574160.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|410676583|ref|YP_006928954.1| stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|423385698|ref|ZP_17362954.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-2]
gi|423527946|ref|ZP_17504391.1| stage III sporulation protein AA [Bacillus cereus HuB1-1]
gi|452200654|ref|YP_007480735.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
gi|228778815|gb|EEM27078.1| Stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|228785336|gb|EEM33346.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228818280|gb|EEM64353.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326941973|gb|AEA17869.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
chinensis CT-43]
gi|401635754|gb|EJS53509.1| stage III sporulation protein AA [Bacillus cereus BAG1X1-2]
gi|402451609|gb|EJV83428.1| stage III sporulation protein AA [Bacillus cereus HuB1-1]
gi|409175712|gb|AFV20017.1| stage III sporulation protein AA [Bacillus thuringiensis Bt407]
gi|452106047|gb|AGG02987.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
thuringiensis str. IS5056]
Length = 308
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E G+ F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKYLIEECKQYDALEEIRVRIGRPLECIAHGKVFFYDYITTAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG E++++ P L ++
Sbjct: 239 VHAGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|206971017|ref|ZP_03231968.1| stage III sporulation protein AA [Bacillus cereus AH1134]
gi|218233741|ref|YP_002368996.1| stage III sporulation protein AA [Bacillus cereus B4264]
gi|228922948|ref|ZP_04086242.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228954479|ref|ZP_04116504.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228960461|ref|ZP_04122112.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|229047889|ref|ZP_04193465.1| Stage III sporulation protein AA [Bacillus cereus AH676]
gi|229071700|ref|ZP_04204916.1| Stage III sporulation protein AA [Bacillus cereus F65185]
gi|229081453|ref|ZP_04213953.1| Stage III sporulation protein AA [Bacillus cereus Rock4-2]
gi|229111668|ref|ZP_04241218.1| Stage III sporulation protein AA [Bacillus cereus Rock1-15]
gi|229129473|ref|ZP_04258444.1| Stage III sporulation protein AA [Bacillus cereus BDRD-Cer4]
gi|229146768|ref|ZP_04275133.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST24]
gi|229152395|ref|ZP_04280587.1| Stage III sporulation protein AA [Bacillus cereus m1550]
gi|229180473|ref|ZP_04307815.1| Stage III sporulation protein AA [Bacillus cereus 172560W]
gi|229192406|ref|ZP_04319369.1| Stage III sporulation protein AA [Bacillus cereus ATCC 10876]
gi|296504681|ref|YP_003666381.1| stage III sporulation protein AA [Bacillus thuringiensis BMB171]
gi|423412001|ref|ZP_17389121.1| stage III sporulation protein AA [Bacillus cereus BAG3O-2]
gi|423426330|ref|ZP_17403361.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-2]
gi|423432213|ref|ZP_17409217.1| stage III sporulation protein AA [Bacillus cereus BAG4O-1]
gi|423437648|ref|ZP_17414629.1| stage III sporulation protein AA [Bacillus cereus BAG4X12-1]
gi|423503117|ref|ZP_17479709.1| stage III sporulation protein AA [Bacillus cereus HD73]
gi|423582406|ref|ZP_17558517.1| stage III sporulation protein AA [Bacillus cereus VD014]
gi|423585324|ref|ZP_17561411.1| stage III sporulation protein AA [Bacillus cereus VD045]
gi|423630919|ref|ZP_17606666.1| stage III sporulation protein AA [Bacillus cereus VD154]
gi|423640723|ref|ZP_17616341.1| stage III sporulation protein AA [Bacillus cereus VD166]
gi|423650061|ref|ZP_17625631.1| stage III sporulation protein AA [Bacillus cereus VD169]
gi|423657139|ref|ZP_17632438.1| stage III sporulation protein AA [Bacillus cereus VD200]
gi|449091154|ref|YP_007423595.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. HD73]
gi|206733789|gb|EDZ50960.1| stage III sporulation protein AA [Bacillus cereus AH1134]
gi|218161698|gb|ACK61690.1| stage III sporulation protein AA [Bacillus cereus B4264]
gi|228590983|gb|EEK48839.1| Stage III sporulation protein AA [Bacillus cereus ATCC 10876]
gi|228602897|gb|EEK60376.1| Stage III sporulation protein AA [Bacillus cereus 172560W]
gi|228631003|gb|EEK87640.1| Stage III sporulation protein AA [Bacillus cereus m1550]
gi|228636596|gb|EEK93061.1| Stage III sporulation protein AA [Bacillus cereus BDRD-ST24]
gi|228654078|gb|EEL09945.1| Stage III sporulation protein AA [Bacillus cereus BDRD-Cer4]
gi|228671803|gb|EEL27097.1| Stage III sporulation protein AA [Bacillus cereus Rock1-15]
gi|228701868|gb|EEL54354.1| Stage III sporulation protein AA [Bacillus cereus Rock4-2]
gi|228711431|gb|EEL63390.1| Stage III sporulation protein AA [Bacillus cereus F65185]
gi|228723346|gb|EEL74715.1| Stage III sporulation protein AA [Bacillus cereus AH676]
gi|228799225|gb|EEM46191.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228805136|gb|EEM51730.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228836719|gb|EEM82066.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296325733|gb|ADH08661.1| stage III sporulation protein AA [Bacillus thuringiensis BMB171]
gi|401104069|gb|EJQ12046.1| stage III sporulation protein AA [Bacillus cereus BAG3O-2]
gi|401111077|gb|EJQ18976.1| stage III sporulation protein AA [Bacillus cereus BAG3X2-2]
gi|401116969|gb|EJQ24807.1| stage III sporulation protein AA [Bacillus cereus BAG4O-1]
gi|401120803|gb|EJQ28599.1| stage III sporulation protein AA [Bacillus cereus BAG4X12-1]
gi|401213285|gb|EJR20026.1| stage III sporulation protein AA [Bacillus cereus VD014]
gi|401233967|gb|EJR40453.1| stage III sporulation protein AA [Bacillus cereus VD045]
gi|401264286|gb|EJR70398.1| stage III sporulation protein AA [Bacillus cereus VD154]
gi|401279784|gb|EJR85706.1| stage III sporulation protein AA [Bacillus cereus VD166]
gi|401282479|gb|EJR88378.1| stage III sporulation protein AA [Bacillus cereus VD169]
gi|401289882|gb|EJR95586.1| stage III sporulation protein AA [Bacillus cereus VD200]
gi|402459338|gb|EJV91075.1| stage III sporulation protein AA [Bacillus cereus HD73]
gi|449024911|gb|AGE80074.1| stage III sporulation protein AA [Bacillus thuringiensis serovar
kurstaki str. HD73]
Length = 308
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E G+ F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKYLIEECKQYDALEEIRVRIGRPLECIAHGKVFFYDYITTAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG E++++ P L ++
Sbjct: 239 VHAGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|30022276|ref|NP_833907.1| stage III sporulation protein AA [Bacillus cereus ATCC 14579]
gi|29897833|gb|AAP11108.1| Stage III sporulation protein AA [Bacillus cereus ATCC 14579]
Length = 316
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/269 (23%), Positives = 124/269 (46%), Gaps = 34/269 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E G+ F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKYLIEECKQYDALEEIRVRIGRPLECIAHGKVFFYDYITTAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV L +AHG E++++ P L ++
Sbjct: 239 VHAGVQLFISAHGFSYEDVVRRPSLKAVL 267
>gi|260588113|ref|ZP_05854026.1| stage III sporulation protein AA [Blautia hansenii DSM 20583]
gi|331082319|ref|ZP_08331445.1| stage III sporulation protein AA [Lachnospiraceae bacterium
6_1_63FAA]
gi|260541640|gb|EEX22209.1| stage III sporulation protein AA [Blautia hansenii DSM 20583]
gi|330400805|gb|EGG80406.1| stage III sporulation protein AA [Lachnospiraceae bacterium
6_1_63FAA]
Length = 323
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/186 (29%), Positives = 91/186 (48%), Gaps = 12/186 (6%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVG 129
G +R GI G T+ + I+S K I + R+ + G + + + I L +
Sbjct: 99 GGHRVGIAGKTILDGNKIKSLK-YISYINLRLSHQIKGCASPILPYIIKNRQICHTLIIS 157
Query: 130 RPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPE 184
P GKTT++R++ R +S+ + V +VD +EI G IP + +G R V +
Sbjct: 158 PPRCGKTTLLRDLIRQVSNGNRYMPGVSVGVVDERSEIAGSYQGIPQNDLGI--RTDVLD 215
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ + M+ + + PEV+ VDE+G + HA S+ G L T HG +E+I + P
Sbjct: 216 CCPKAEGMMMLIRSMSPEVVAVDELGDYEDIHAIESVIHCGCKLFATVHGSSIEDIKRKP 275
Query: 245 ILSDLI 250
+L L+
Sbjct: 276 LLQRLM 281
>gi|407979685|ref|ZP_11160495.1| stage III sporulation protein AA [Bacillus sp. HYC-10]
gi|407413697|gb|EKF35386.1| stage III sporulation protein AA [Bacillus sp. HYC-10]
Length = 303
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ L +G P GKTT++R++AR++S ++ IVD +EI G +P + G
Sbjct: 134 NTLIIGPPQTGKTTLLRDLARLVSTGTTTISPRKTGIVDERSEIAGCIRGVPQHSFG--H 191
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + ++ + + PEVIIVDEIG + A GV +I +AHG LE
Sbjct: 192 RIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGKSEDVQALLEAIHAGVTIIVSAHGYSLE 251
Query: 239 NIIKNPILSDL 249
++ K P L
Sbjct: 252 DLYKRPSFEPL 262
>gi|402298077|ref|ZP_10817801.1| stage III sporulation protein AA [Bacillus alcalophilus ATCC 27647]
gi|401726721|gb|EJS99937.1| stage III sporulation protein AA [Bacillus alcalophilus ATCC 27647]
Length = 310
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 11/186 (5%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRP 131
G +R G+ G + I RV R G D + + + + L +G P
Sbjct: 92 GGHRVGLSGKVILEKGQVKTLKEISSYNIRVARQTIGVADKLISQIFEKEWLNTLIIGPP 151
Query: 132 GVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 184
GKTT++R+IAR++S+ +K+ V IVD +EI +P +G R+ V +
Sbjct: 152 QTGKTTLLRDIARLISEGDRKKGIQPLKVGIVDERSEIAASVKGVPQHRLGD--RVDVLD 209
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ + M+ + P+VIIVDEIG E + A GV +I TAHG + ++ + P
Sbjct: 210 GCPKVEGMMMLIRTMSPDVIIVDEIGREEDRIAIEEAMYAGVKVITTAHGHSVHDLKRRP 269
Query: 245 ILSDLI 250
L LI
Sbjct: 270 ALKGLI 275
>gi|167758077|ref|ZP_02430204.1| hypothetical protein CLOSCI_00415 [Clostridium scindens ATCC 35704]
gi|167663974|gb|EDS08104.1| stage III sporulation protein AA [Clostridium scindens ATCC 35704]
Length = 312
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 96/213 (45%), Gaps = 19/213 (8%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVS 109
+Y+ + + E E Q + GG +R G+ G + I + R+ V
Sbjct: 70 EYISNYSLYAYEQEMKQGFITIEGG-HRVGMTGQAIIENGKVKNLKHISSVNVRMSHEVL 128
Query: 110 GHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNE 162
G D V+ + Y +S+ L + P GKTT++R++ R +SD V +VD +E
Sbjct: 129 GCADKVFPHITYNRSLYHTLVISPPRCGKTTLLRDMIRQISDGNDWVRGMAVGVVDERSE 188
Query: 163 IGGDGDIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
IGG +G A+ R V + + + MI + + PEVI VDEIG+ + HA
Sbjct: 189 IGG------CYMGVAQNHLGIRTDVLDGCPKAEGMIMLIRSMGPEVIAVDEIGSAEDVHA 242
Query: 218 CRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
G ++ T H +E + K P+L +I
Sbjct: 243 IEYAMHCGCKMLATVHAGSMEELRKKPLLDRMI 275
>gi|379720795|ref|YP_005312926.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus 3016]
gi|378569467|gb|AFC29777.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus 3016]
Length = 342
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGT 176
L + P +GKTT++R++AR+LS + +V IVD +EI +P +G
Sbjct: 164 LVISPPQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP 223
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG
Sbjct: 224 --RTDVLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRD 281
Query: 237 LENIIKNPILSDLIGG 252
++++ + PIL +L+ G
Sbjct: 282 VDDVRRRPILKELLAG 297
>gi|229061884|ref|ZP_04199213.1| Stage III sporulation protein AA [Bacillus cereus AH603]
gi|228717397|gb|EEL69066.1| Stage III sporulation protein AA [Bacillus cereus AH603]
Length = 308
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 117/264 (44%), Gaps = 24/264 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----- 62
++LP ++ ++ + L E+ + +GR E GE F Y+ + E ++ L
Sbjct: 6 EVLPKTMKQLVEGCKQYDTLEEIRVRIGRPLECIAHGEVFFYDYIATAEDAIHLLNKLSQ 65
Query: 63 -------EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMV 115
E + G +R G+ G + + + R+ R G + +
Sbjct: 66 FSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSTVKMIRDVSSFNIRIARQKIGIAEPL 125
Query: 116 YDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD- 166
L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 126 LPYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASKIPSCKVGIVDERSEIAGCV 185
Query: 167 GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
IP G R+ V + + + M+ + + P+++IVDEIG + ++ A GV
Sbjct: 186 KGIPQYDFGV--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGV 243
Query: 227 MLIGTAHGEWLENIIKNPILSDLI 250
L +AHG ++++K P L ++
Sbjct: 244 QLFISAHGFSYDDVVKRPSLQAVL 267
>gi|365159017|ref|ZP_09355204.1| stage III sporulation protein AA [Bacillus sp. 7_6_55CFAA_CT2]
gi|363626006|gb|EHL77015.1| stage III sporulation protein AA [Bacillus sp. 7_6_55CFAA_CT2]
Length = 308
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/265 (24%), Positives = 122/265 (46%), Gaps = 34/265 (12%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEELEYAQS 67
++LP ++ ++ + L E+ + +GR E G+ F Y+ + E ++ Y +
Sbjct: 6 EVLPKTMKYLIEECKQYDALEEIRVRIGRPLECIAHGKVFFYDYITTAEDAI----YLLN 61
Query: 68 AVGEFG----------------GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSG 110
+ +F G +R G+ G + SA++ + + R+ R G
Sbjct: 62 KLSQFSIYTMEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKIG 120
Query: 111 HIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNE 162
+ + L+ + + + +G P GKTT++R++AR +S +V IVD +E
Sbjct: 121 IAEPLLPYLYEKRWLNTMVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSE 180
Query: 163 IGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I G IP GT R+ V + + + M+ + + P+++IVDEIG + ++ A
Sbjct: 181 IAGCVKGIPQYDFGT--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEA 238
Query: 222 AERGVMLIGTAHGEWLENIIKNPIL 246
GV L +AHG E++++ P L
Sbjct: 239 VHAGVQLFISAHGFSYEDVVRRPSL 263
>gi|386723401|ref|YP_006189727.1| stage III sporulation protein AA [Paenibacillus mucilaginosus K02]
gi|384090526|gb|AFH61962.1| stage III sporulation protein AA [Paenibacillus mucilaginosus K02]
Length = 334
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGT 176
L + P +GKTT++R++AR+LS + +V IVD +EI +P +G
Sbjct: 156 LVISPPQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP 215
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG
Sbjct: 216 --RTDVLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRD 273
Query: 237 LENIIKNPILSDLIGG 252
++++ + PIL +L+ G
Sbjct: 274 VDDVRRRPILKELLAG 289
>gi|337746932|ref|YP_004641094.1| stage III sporulation protein AA [Paenibacillus mucilaginosus
KNP414]
gi|336298121|gb|AEI41224.1| Stage III sporulation protein AA [Paenibacillus mucilaginosus
KNP414]
Length = 334
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 72/136 (52%), Gaps = 11/136 (8%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK--------RVVIVDTSNEIGGD-GDIPHSAIGT 176
L + P +GKTT++R++AR+LS + +V IVD +EI +P +G
Sbjct: 156 LVISPPQLGKTTLVRDLARLLSSGSAEAGIGGRSFKVGIVDERSEIAACVRGVPRFDVGP 215
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + + M+ + + PEV+I DEIG +A A G+ LI TAHG
Sbjct: 216 --RTDVLDGCPKAEGMMMMIRSMSPEVLIADEIGRSEDAAAIHEALHAGIGLIATAHGRD 273
Query: 237 LENIIKNPILSDLIGG 252
++++ + PIL +L+ G
Sbjct: 274 VDDVRRRPILKELLAG 289
>gi|423082410|ref|ZP_17071002.1| stage III sporulation protein AA [Clostridium difficile
002-P50-2011]
gi|423087822|ref|ZP_17076208.1| stage III sporulation protein AA [Clostridium difficile
050-P50-2011]
gi|357544136|gb|EHJ26142.1| stage III sporulation protein AA [Clostridium difficile
050-P50-2011]
gi|357548736|gb|EHJ30596.1| stage III sporulation protein AA [Clostridium difficile
002-P50-2011]
Length = 322
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSDEFQK 152
I L RV R + G D + + GK+ L + P GKTT++R+I R LS+ +
Sbjct: 125 ISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNED 184
Query: 153 ------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
+V +VD NEI G IP +G R + E + + + + P VI+
Sbjct: 185 YGFKGLKVALVDERNEIAGAYLGIPQMDVGI--RTDIIETCPKDLGITMLLRSMSPNVIV 242
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
DEIG+E E A + G+ LI T HG+ +++I
Sbjct: 243 TDEIGSEKEIKALYTALNGGIGLITTVHGDSIDDI 277
>gi|347542681|ref|YP_004857318.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-rat-Yit]
gi|346985717|dbj|BAK81392.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-rat-Yit]
Length = 280
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 11/162 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQK- 152
I L R+ R VSG + ++ G IL + P GKTT++R++++++S+
Sbjct: 92 ISSLNIRICREVSGFGKKFINHIYKGGEILNTLIISPPKCGKTTLLRDLSKIISNGDSPL 151
Query: 153 ----RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
+V I+D +EI +P IG R + + L+ K +I A+ + PEVI+ D
Sbjct: 152 NRGFKVSIIDERSEIAASFRGVPQLDIGI--RTDIYDNCLKSKGIILAIRSMAPEVIVCD 209
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
EIGT + + GV +I T HG E+ +S+L
Sbjct: 210 EIGTREDFESILVAYNSGVSIISTIHGNSEEDFYNKLRMSNL 251
>gi|226311909|ref|YP_002771803.1| stage III sporulation protein AA [Brevibacillus brevis NBRC 100599]
gi|226094857|dbj|BAH43299.1| stage III sporulation protein AA [Brevibacillus brevis NBRC 100599]
Length = 320
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 88/189 (46%), Gaps = 18/189 (9%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGK--SIL 126
G +R GI G + + IR + R+ R G MV L GK + L
Sbjct: 98 GGHRIGIAGKVVLDKGEVKGIRD----VTSFNIRIAREKKGAAKMVMSYLFEDGKLQNTL 153
Query: 127 FVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 181
+ P GKTT++R+IAR +S ++V IVD +E+ G +P +G R
Sbjct: 154 LISPPQCGKTTLLRDIARTISYGSECSSSRKVGIVDERSELAGCLQGVPQRDVGP--RTD 211
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + M+ + + P+V+IVDE+G + A GV +I +AHG ++ +
Sbjct: 212 VLDACPKAVGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIHAGVAVICSAHGASVKEVA 271
Query: 242 KNPILSDLI 250
+ P+L LI
Sbjct: 272 ERPMLGKLI 280
>gi|23099349|ref|NP_692815.1| stage III sporulation protein AA [Oceanobacillus iheyensis HTE831]
gi|22777578|dbj|BAC13850.1| stage III sporulation protein AA (mutants block sporulation after
engulfment) [Oceanobacillus iheyensis HTE831]
Length = 327
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 70/131 (53%), Gaps = 8/131 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ-----KRVVIVDTSNEIGGD-GDIPHSAIGTARR 179
+ +G P GKTT++R++ R+++ Q K+V IVD +EI IP +GT R
Sbjct: 142 MVIGPPQSGKTTIIRDLTRMIATIDQPMNRSKKVGIVDERSEIAASLQGIPQHDVGT--R 199
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
+ + + + M+ V + P++I+VDEIGT+ + A GV +I TAH ++
Sbjct: 200 TDIMDACPKAEGMMMLVRSMSPDIIVVDEIGTDHDVEALLEAIHTGVTIICTAHANQWDD 259
Query: 240 IIKNPILSDLI 250
+ K P + LI
Sbjct: 260 LNKRPSMKRLI 270
>gi|375362979|ref|YP_005131018.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|421731034|ref|ZP_16170160.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|371568973|emb|CCF05823.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|407075188|gb|EKE48175.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum M27]
Length = 307
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 177
+ L +G P GKTT++R++AR LS KR+ IVD +EI G IP + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG-- 194
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG +
Sbjct: 195 RRVDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNM 254
Query: 238 ENIIKNPILSDL 249
++++K P L L
Sbjct: 255 KDLVKRPSLKML 266
>gi|394992156|ref|ZP_10384948.1| stage III sporulation protein AA [Bacillus sp. 916]
gi|429505855|ref|YP_007187039.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|393806985|gb|EJD68312.1| stage III sporulation protein AA [Bacillus sp. 916]
gi|429487445|gb|AFZ91369.1| stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 307
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 177
+ L +G P GKTT++R++AR LS KR+ IVD +EI G IP + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG-- 194
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG +
Sbjct: 195 RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNM 254
Query: 238 ENIIKNPILSDL 249
++++K P L L
Sbjct: 255 KDLVKRPSLKML 266
>gi|452856213|ref|YP_007497896.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
gi|452080473|emb|CCP22236.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens subsp. plantarum UCMB5036]
Length = 307
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 177
+ L +G P GKTT++R++AR LS KR+ IVD +EI G IP + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG-- 194
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG +
Sbjct: 195 RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNM 254
Query: 238 ENIIKNPILSDL 249
++++K P L L
Sbjct: 255 KDLVKRPSLKML 266
>gi|384266059|ref|YP_005421766.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387899079|ref|YP_006329375.1| stage III sporulation protein AA [Bacillus amyloliquefaciens Y2]
gi|380499412|emb|CCG50450.1| Stage III sporulation protein AA [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|387173189|gb|AFJ62650.1| stage III sporulation protein AA [Bacillus amyloliquefaciens Y2]
Length = 307
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 177
+ L +G P GKTT++R++AR LS KR+ IVD +EI G IP + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG-- 194
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG +
Sbjct: 195 RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNM 254
Query: 238 ENIIKNPILSDL 249
++++K P L L
Sbjct: 255 KDLVKRPSLKML 266
>gi|385265443|ref|ZP_10043530.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
gi|385149939|gb|EIF13876.1| ATPase family associated with various cellular activities (AAA)
[Bacillus sp. 5B6]
Length = 307
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 177
+ L +G P GKTT++R++AR LS KR+ IVD +EI G IP + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG-- 194
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG +
Sbjct: 195 RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNM 254
Query: 238 ENIIKNPILSDL 249
++++K P L L
Sbjct: 255 KDLVKRPSLKML 266
>gi|125973363|ref|YP_001037273.1| stage III sporulation protein spoIIIAA [Clostridium thermocellum
ATCC 27405]
gi|256005469|ref|ZP_05430432.1| stage III sporulation protein AA [Clostridium thermocellum DSM
2360]
gi|281417563|ref|ZP_06248583.1| stage III sporulation protein AA [Clostridium thermocellum JW20]
gi|385778725|ref|YP_005687890.1| stage III sporulation protein AA [Clostridium thermocellum DSM
1313]
gi|419722089|ref|ZP_14249238.1| stage III sporulation protein AA [Clostridium thermocellum AD2]
gi|419724836|ref|ZP_14251893.1| stage III sporulation protein AA [Clostridium thermocellum YS]
gi|125713588|gb|ABN52080.1| stage III sporulation protein AA [Clostridium thermocellum ATCC
27405]
gi|255990609|gb|EEU00728.1| stage III sporulation protein AA [Clostridium thermocellum DSM
2360]
gi|281408965|gb|EFB39223.1| stage III sporulation protein AA [Clostridium thermocellum JW20]
gi|316940405|gb|ADU74439.1| stage III sporulation protein AA [Clostridium thermocellum DSM
1313]
gi|380771725|gb|EIC05588.1| stage III sporulation protein AA [Clostridium thermocellum YS]
gi|380781843|gb|EIC11492.1| stage III sporulation protein AA [Clostridium thermocellum AD2]
Length = 336
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 74/149 (49%), Gaps = 13/149 (8%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK----SILFVGRPGVGKTTVMREIARVLSDEFQK 152
+ GL R+ R ++G V + + + L V P GKTT++R+I R +SD ++
Sbjct: 138 VSGLNIRISREITGCSSKVLKYIISSEKQVYNTLIVSPPQCGKTTLLRDITRAISDGVEE 197
Query: 153 ------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
+V +VD +EI +P + +GT R V + + MI + + P+VI+
Sbjct: 198 MGFKGVKVGVVDERSEIAACYKGVPQNRVGT--RTDVLDACPKQIGMIMMLRSMSPDVIV 255
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHG 234
DEIG + + A + GV +I TAHG
Sbjct: 256 TDEIGNKGDKDALIQVLNAGVKVISTAHG 284
>gi|317056392|ref|YP_004104859.1| AAA ATPase [Ruminococcus albus 7]
gi|315448661|gb|ADU22225.1| AAA ATPase [Ruminococcus albus 7]
Length = 298
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 7/177 (3%)
Query: 77 RAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG--KSILFVGRPGVG 134
R GI GT + I L R+ R + G ++D +S+L G P G
Sbjct: 97 RIGISGTACADNGKIVNVKNITSLNIRIPREIKGCAGSIFDRFMSAAPRSLLIAGSPSSG 156
Query: 135 KTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMI 193
KTT +R++ R+ + R ++D EI G IP + IG + P + + +
Sbjct: 157 KTTFLRDLTRLCGHRY--RTSLIDERGEIAASVGGIPANDIGIMTDVFDRYP--RKEAVQ 212
Query: 194 EAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
AV P+VI+ DEIG+ + + + G LI + H L ++I P +S L+
Sbjct: 213 TAVRVMSPQVIVCDEIGSAEDITSLEYAVDSGAELIASCHCSGLSDLIHKPNISKLV 269
>gi|51893000|ref|YP_075691.1| stage III sporulation protein AA [Symbiobacterium thermophilum IAM
14863]
gi|51856689|dbj|BAD40847.1| stage III sporulation protein AA [Symbiobacterium thermophilum IAM
14863]
Length = 292
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 92/188 (48%), Gaps = 14/188 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHID-MVYDLLHYGK--SILFVG 129
G +R G+ G + IR+ K + L R+ R V G D ++ L+ G+ S L V
Sbjct: 76 GGHRVGLCGRAVTEACRIRTLK-QVASLNVRIAREVPGAADGLLPHLVRGGRFLSTLLVS 134
Query: 130 RPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQV 182
P GKTT++R++ R LS + +V +VD +E+ G +P +G R V
Sbjct: 135 PPQAGKTTLLRDLVRQLSTGVPRLGLRGLKVGLVDERSEVAGCVCGVPQRDVGP--RTDV 192
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + + ++ + P+V+ DEIG +A A GV ++ TAHG L ++ +
Sbjct: 193 LDGCPKAEGLMLMIRALSPQVVAADEIGRPEDAVAVMEALHAGVAVLATAHGAGLSDVRR 252
Query: 243 NPILSDLI 250
P L++L+
Sbjct: 253 RPALAELL 260
>gi|389571702|ref|ZP_10161791.1| stage III sporulation protein AA [Bacillus sp. M 2-6]
gi|388428596|gb|EIL86392.1| stage III sporulation protein AA [Bacillus sp. M 2-6]
Length = 307
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ L +G P GKTT++R++AR++S ++ IVD +EI G +P + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLARLVSTGTTAISPRKTGIVDERSEIAGCIRGVPQHSFG--H 195
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + ++ + + PEVIIVDEIG + A GV +I +AHG LE
Sbjct: 196 RIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGKSEDVQALLEAIHAGVTIIVSAHGYSLE 255
Query: 239 NIIKNPILSDL 249
++ K P L
Sbjct: 256 DLSKRPSFEPL 266
>gi|451346346|ref|YP_007444977.1| stage III sporulation protein AA [Bacillus amyloliquefaciens IT-45]
gi|449850104|gb|AGF27096.1| stage III sporulation protein AA [Bacillus amyloliquefaciens IT-45]
Length = 307
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 177
+ L +G P GKTT++R++AR LS KR+ IVD +EI G IP + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG-- 194
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG +
Sbjct: 195 RRVDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWNM 254
Query: 238 ENIIKNPILSDL 249
++++K P L L
Sbjct: 255 KDLVKRPSLKML 266
>gi|288870190|ref|ZP_06113246.2| stage III sporulation protein AA [Clostridium hathewayi DSM 13479]
gi|288868079|gb|EFD00378.1| stage III sporulation protein AA [Clostridium hathewayi DSM 13479]
Length = 356
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 13/210 (6%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ + + E E Q + GG +R G+ G T+ S I++ K I + R+ V
Sbjct: 99 EYMSNYSLYAFEEEMKQGFLTIQGG-HRIGVAGKTILDESGIKTMK-FISFINVRLSHQV 156
Query: 109 SGHIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQKR----VVIVDTSN 161
G V L+ + IL + P GKTT++R++ R +S+ + V +VD +
Sbjct: 157 KGCASPVLPYLYDSEEILHTLIISPPRCGKTTLLRDLIRQISNGTEAHPGMTVGVVDERS 216
Query: 162 EIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 220
EIG IP + +G R + + + + M+ + P VI VDEIG+ + A
Sbjct: 217 EIGACYQGIPQNELGI--RTDILDCCPKARGMMMLIRTMSPRVIAVDEIGSREDLEAVEY 274
Query: 221 IAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ G LI T HG ++++ + P+L L+
Sbjct: 275 VMNCGCKLIATVHGSSIDDLKQKPVLRRLV 304
>gi|254974727|ref|ZP_05271199.1| stage III sporulation protein AA [Clostridium difficile QCD-66c26]
gi|255092116|ref|ZP_05321594.1| stage III sporulation protein AA [Clostridium difficile CIP 107932]
gi|255313853|ref|ZP_05355436.1| stage III sporulation protein AA [Clostridium difficile QCD-76w55]
gi|255516534|ref|ZP_05384210.1| stage III sporulation protein AA [Clostridium difficile QCD-97b34]
gi|255649634|ref|ZP_05396536.1| stage III sporulation protein AA [Clostridium difficile QCD-37x79]
gi|260682798|ref|YP_003214083.1| stage III sporulation protein AA [Clostridium difficile CD196]
gi|260686396|ref|YP_003217529.1| stage III sporulation protein AA [Clostridium difficile R20291]
gi|306519751|ref|ZP_07406098.1| stage III sporulation protein AA [Clostridium difficile QCD-32g58]
gi|384360380|ref|YP_006198232.1| stage III sporulation protein AA [Clostridium difficile BI1]
gi|260208961|emb|CBA61998.1| stage III sporulation protein AA [Clostridium difficile CD196]
gi|260212412|emb|CBE03268.1| stage III sporulation protein AA [Clostridium difficile R20291]
Length = 322
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSDEFQK 152
I L RV R + G D + + GK+ L + P GKTT++R+I R LS+ +
Sbjct: 125 ISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNED 184
Query: 153 ------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
+V +VD NEI G +P +G R + E + + + + P VI+
Sbjct: 185 YGFKGLKVALVDERNEIAGAYLGVPQMDVGI--RTDIIETCPKDLGITMLLRSMSPNVIV 242
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
DEIG+E E A + G+ LI T HG+ +++I
Sbjct: 243 TDEIGSEKEIKALYTALNGGIGLITTVHGDSIDDI 277
>gi|75763195|ref|ZP_00742959.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74489310|gb|EAO52762.1| Stage III sporulation protein AA [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 208
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 70/132 (53%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ +G P GKTT++R++AR +S +V IVD +EI G IP GT
Sbjct: 38 MVIGPPQTGKTTLLRDVARCMSQGVSASEIPSCKVGIVDERSEIAGCVKGIPQYDFGT-- 95
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + M+ + + P+++IVDEIG + ++ A GV L +AHG E
Sbjct: 96 RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRKEDSEAIMEAVHAGVQLFISAHGFSYE 155
Query: 239 NIIKNPILSDLI 250
++++ P L ++
Sbjct: 156 DVVRRPSLKAVL 167
>gi|154686707|ref|YP_001421868.1| hypothetical protein RBAM_022760 [Bacillus amyloliquefaciens FZB42]
gi|154352558|gb|ABS74637.1| SpoIIIAA [Bacillus amyloliquefaciens FZB42]
Length = 307
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 177
+ L +G P GKTT++R++AR LS KR+ IVD +EI G IP + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGSKRIPAKKTGIVDERSEIAGCLRGIPQHSFG-- 194
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V + + + ++ + + P+VIIVDEIG ++ A GV +I +AHG +
Sbjct: 195 RRIDVLDACPKAEGLMMMIRSMSPDVIIVDEIGRMEDSQALLEALHAGVSVIVSAHGWDM 254
Query: 238 ENIIKNPILSDL 249
++++K P L L
Sbjct: 255 KDLVKRPSLKML 266
>gi|420156698|ref|ZP_14663538.1| putative stage III sporulation protein AA [Clostridium sp. MSTE9]
gi|394756708|gb|EJF39767.1| putative stage III sporulation protein AA [Clostridium sp. MSTE9]
Length = 337
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 84/171 (49%), Gaps = 18/171 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL--HYGKSILF 127
G +R GI GT +++ +R I RV R +SG D V L+ + +L
Sbjct: 105 GGHRVGICGTAVLDQGQVAGLRD----ISSFNIRVARQISGAADEVLSLVGEEIVQGVLL 160
Query: 128 VGRPGVGKTTVMREIARVLSDEFQ---KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQV 182
G P GKTT++R++AR L+ +++ +VD E+ G GD + +G +
Sbjct: 161 AGAPSTGKTTILRDLARQLAGGGTLPPRKITVVDERGELAGVYRGD-AQNDLGCCCDILD 219
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
P Q +++A+ + PEVI+ DE+G+E E A + GV LI + H
Sbjct: 220 GYPKSQG--ILQAIRSLSPEVILCDELGSERETAAVEEVVNAGVSLIVSVH 268
>gi|164688622|ref|ZP_02212650.1| hypothetical protein CLOBAR_02267 [Clostridium bartlettii DSM
16795]
gi|164603035|gb|EDQ96500.1| stage III sporulation protein AA [Clostridium bartlettii DSM 16795]
Length = 321
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 80/171 (46%), Gaps = 21/171 (12%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSDEFQK 152
I L RV R + G V + K+ + + P GKTT++R+I R +S+ ++
Sbjct: 124 ISSLNIRVSREIKGCSKKVLPHIIKNKNQINNTIIISPPQCGKTTILRDIVRNISNGNRE 183
Query: 153 ------RVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMP 201
+V ++D NEI G S +G A+ R V E + ++ + + P
Sbjct: 184 YGFSGVKVALIDERNEIAG------SCMGVAQLDVGMRTDVMETCPKDLGIMMVLRSMSP 237
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGG 252
VI+ DEIG E E A + GV LI T HG+ +E+I+ L L+ G
Sbjct: 238 NVIVTDEIGNEKEIKALYTALNGGVSLITTVHGDSIEDILHRTELKRLLDG 288
>gi|255655197|ref|ZP_05400606.1| stage III sporulation protein AA [Clostridium difficile QCD-23m63]
gi|296451182|ref|ZP_06892923.1| stage III sporulation protein AA [Clostridium difficile NAP08]
gi|296880466|ref|ZP_06904428.1| stage III sporulation protein AA [Clostridium difficile NAP07]
gi|296260003|gb|EFH06857.1| stage III sporulation protein AA [Clostridium difficile NAP08]
gi|296428420|gb|EFH14305.1| stage III sporulation protein AA [Clostridium difficile NAP07]
Length = 322
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 75/155 (48%), Gaps = 13/155 (8%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSDEFQK 152
I L RV R + G D + + GK+ L + P GKTT++R+I R LS+ +
Sbjct: 125 ISSLNIRVSREIIGCSDKILSHIIKGKNQINNTLIISPPQCGKTTLIRDIVRNLSNGNED 184
Query: 153 ------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
+V +VD NEI G +P +G R + E + + + + P VI+
Sbjct: 185 YGFKGLKVALVDERNEIAGAYLGVPQMDVGI--RTDIIETCPKDLGITMLLRSMSPNVIV 242
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
DEIG+E E A + G+ LI T HG+ +++I
Sbjct: 243 TDEIGSEKEIKALYTALNGGIGLITTVHGDSIDDI 277
>gi|399053816|ref|ZP_10742615.1| stage III sporulation protein AA [Brevibacillus sp. CF112]
gi|398048593|gb|EJL41065.1| stage III sporulation protein AA [Brevibacillus sp. CF112]
Length = 320
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK---SIL 126
G +R GI G + + IR I R+ R G V L G S L
Sbjct: 98 GGHRIGIAGKVVLDKGDVKGIRD----ITSFNIRIAREKKGAAQKVMPYLFEGGKVLSTL 153
Query: 127 FVGRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 181
+ P GKTT++R++AR LS E+ ++V IVD +E+ G +P +G R
Sbjct: 154 VISPPQCGKTTLLRDMARSLSYGSEWSSSRKVGIVDERSELAGCLQGVPQRDVGP--RTD 211
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + M+ + + P+V+IVDE+G + A GV +I +AHG ++ +
Sbjct: 212 VLDACPKAAGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIHAGVAVICSAHGADIQEVA 271
Query: 242 KNPILSDLI 250
+ P+L +L+
Sbjct: 272 RRPMLGNLV 280
>gi|433542466|ref|ZP_20498893.1| stage III sporulation protein AA [Brevibacillus agri BAB-2500]
gi|432186277|gb|ELK43751.1| stage III sporulation protein AA [Brevibacillus agri BAB-2500]
Length = 258
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK---SIL 126
G +R GI G + + IR I R+ R G V L G S L
Sbjct: 36 GGHRIGIAGKVVLDKGDVKGIRD----ITSFNIRIAREKKGAAQKVMPYLFEGGKVLSTL 91
Query: 127 FVGRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 181
+ P GKTT++R++AR LS E+ ++V IVD +E+ G +P +G R
Sbjct: 92 VISPPQCGKTTLLRDMARSLSYGSEWSSSRKVGIVDERSELAGCLQGVPQRDVGP--RTD 149
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + M+ + + P+V+IVDE+G + A GV +I +AHG ++ +
Sbjct: 150 VLDACPKAAGMMMLIRSMSPDVLIVDEVGRAEDGDAVWEAIHAGVAVICSAHGADIQEVA 209
Query: 242 KNPILSDLI 250
+ P+L +L+
Sbjct: 210 RRPMLGNLV 218
>gi|398311387|ref|ZP_10514861.1| stage III sporulation protein AA [Bacillus mojavensis RO-H-1]
Length = 307
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 78/160 (48%), Gaps = 9/160 (5%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQK-- 152
I R+ R G + + LH + L +G P GKTT++R++AR+ S +
Sbjct: 109 IASFNIRIARQKLGIAEPLLTYLHQNGWLNTLIIGPPQTGKTTLLRDLARLASSGKNRIA 168
Query: 153 --RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
+ IVD +EI G IP G +R+ V + + + ++ + + PEVIIVDEI
Sbjct: 169 PVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEI 226
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
G + A GV +I +AHG + +++K P L L
Sbjct: 227 GRAEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|403380881|ref|ZP_10922938.1| stage III sporulation protein AA [Paenibacillus sp. JC66]
Length = 326
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 79/164 (48%), Gaps = 13/164 (7%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLH--YGKSILFVGRPGVGKTTVMREIARVLSDEFQ--- 151
I R+ R +G + LL G SIL V P GKTT++R++AR +S +
Sbjct: 122 ISSFNIRIARERTGCASQLLPLLSDARGGSILLVSPPQHGKTTMLRDLARSISGGYTCGQ 181
Query: 152 -----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
++V I+D +EI +P +G R V + + + M+ + + PEV+I
Sbjct: 182 IRVPGRKVGIIDERSEIAACVKGVPTFDVGP--RTDVLDHCPKAEGMMMMIRSMSPEVLI 239
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
VDE+G + +A A G+ ++ TAH L +I K P L L
Sbjct: 240 VDELGRDEDAAAVHEAIHAGIQVLATAHAASLGDIEKRPGLRTL 283
>gi|157692942|ref|YP_001487404.1| stage III sporulation protein AA [Bacillus pumilus SAFR-032]
gi|157681700|gb|ABV62844.1| stage III sporulation protein AA [Bacillus pumilus SAFR-032]
Length = 307
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ L +G P GKTT++R+IAR+ S + K+ I+D +EI G +P G
Sbjct: 138 NTLIIGPPQTGKTTLLRDIARLASTGTKAIPPKKTGIIDERSEIAGCIRGVPQHQFG--H 195
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + ++ + + PEV+IVDEIG + A GV +I + HG LE
Sbjct: 196 RVDVLDACPKAEGLMMMIRSMSPEVMIVDEIGKSEDVQALLEAIHAGVSIIVSVHGYSLE 255
Query: 239 NIIKNPILSDL 249
++ K P L L
Sbjct: 256 DVYKRPSLKPL 266
>gi|440781945|ref|ZP_20960173.1| stage III sporulation protein AA [Clostridium pasteurianum DSM 525]
gi|440220663|gb|ELP59870.1| stage III sporulation protein AA [Clostridium pasteurianum DSM 525]
Length = 305
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 91/193 (47%), Gaps = 14/193 (7%)
Query: 58 SVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD 117
S+E+ E Q + GG +R GI G + I + L R+ R V G D V
Sbjct: 73 SIED-EIKQGYITIKGG-HRVGICGNCIVENNIVKIIKNVSSLNIRICREVIGCSDKVMP 130
Query: 118 LLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD 168
+ ++L + P GKTT++R+I R +S + K V ++D +EI D
Sbjct: 131 WIVKDNNVLNTIIISPPNCGKTTLIRDITRNISSGSKNFGIRGKNVCVIDERSEICASSD 190
Query: 169 -IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVM 227
IP +G R V + + + ++ A+ + P+VI+ DEIGT + + S G+
Sbjct: 191 GIPQLNVGI--RTDVMDNCPKSQGIMMAIRSMAPDVIVCDEIGTYEDVKSILSALNCGIN 248
Query: 228 LIGTAHGEWLENI 240
LI T HG +E++
Sbjct: 249 LITTIHGFGIEDL 261
>gi|374296405|ref|YP_005046596.1| stage III sporulation protein AA [Clostridium clariflavum DSM
19732]
gi|359825899|gb|AEV68672.1| stage III sporulation protein AA [Clostridium clariflavum DSM
19732]
Length = 340
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 91/190 (47%), Gaps = 18/190 (9%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS----ILFV 128
G +R GI G + + I++ K I GL RV R V G + + G++ L +
Sbjct: 115 GGHRVGITGKAVLDGTGIKNLKD-ISGLNIRVSREVRGCSSEILKYIVQGENEIYNTLII 173
Query: 129 GRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTARRM 180
P GKTT++R+IAR +SD + +V IVD +EI G P +G R
Sbjct: 174 SPPKCGKTTILRDIARSISDGVAQIGLKGLKVGIVDERSEIAACFKGS-PQKQVGV--RT 230
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + M + + P+VII DEIG+ + A + GV ++ TAHG + +
Sbjct: 231 DVLDACPKQLGMSMLLRSMSPDVIITDEIGSSGDKEALMQVINAGVKIVTTAHGYSISQL 290
Query: 241 -IKNPILSDL 249
++ +LS L
Sbjct: 291 KLRKEVLSML 300
>gi|374603523|ref|ZP_09676501.1| stage III sporulation protein AA [Paenibacillus dendritiformis
C454]
gi|374390825|gb|EHQ62169.1| stage III sporulation protein AA [Paenibacillus dendritiformis
C454]
Length = 341
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 25/196 (12%)
Query: 74 GDNRAGIEG----TLHRISAIRSRKGAIVGLTCRVGRAVSG----HIDMVYDLLH-YGKS 124
G +R G+ G R+S +R I G R+ R V G + M+ D H +
Sbjct: 100 GGHRIGLAGRTVLAQGRVSHLRE----ITGFNLRIAREVHGIAASVMPMLLDFKHAHVHH 155
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHSAI 174
L V P GKTT++R++ R + +V +VD +EI G +P +
Sbjct: 156 TLIVSPPQQGKTTLLRDLVRAIGSGLWHHPEARWKALKVGVVDERSEIAGCIKGVPSYDL 215
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
G R V + + + M+ + + P+V+ VDE+G E + A R GV LI TAH
Sbjct: 216 GY--RTDVMDGCPKAEGMMMFIRSMSPDVLAVDEMGREEDLLAMREAMHAGVRLIATAHA 273
Query: 235 EWLENIIKNPILSDLI 250
E ++++++ P L L+
Sbjct: 274 EDMDDLLRRPGLQQLL 289
>gi|225570621|ref|ZP_03779646.1| hypothetical protein CLOHYLEM_06723 [Clostridium hylemonae DSM
15053]
gi|225160634|gb|EEG73253.1| hypothetical protein CLOHYLEM_06723 [Clostridium hylemonae DSM
15053]
Length = 316
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 77/166 (46%), Gaps = 18/166 (10%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ-- 151
I + R+ V G D ++ + + + L + P GKTT++R++ R +SD
Sbjct: 116 ISSVNLRIAHEVLGCADEIFPYVALNRKLCHTLIISPPRCGKTTLLRDMIRQISDGNAWV 175
Query: 152 --KRVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVI 204
V +VD +EIGG +G A+ R V + + + MI + + PEV+
Sbjct: 176 KGMSVGVVDERSEIGG------CYMGVAQNHLGMRTDVLDCCPKAEGMIMLIRSMSPEVV 229
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VDEIG + HA G L+ + HG +E I K P+L L+
Sbjct: 230 AVDEIGAAEDVHAVEYAMHCGCKLLASIHGASMEEIRKKPLLGRLV 275
>gi|255280238|ref|ZP_05344793.1| stage III sporulation protein AA [Bryantella formatexigens DSM
14469]
gi|255269329|gb|EET62534.1| stage III sporulation protein AA [Marvinbryantia formatexigens DSM
14469]
Length = 381
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 90/189 (47%), Gaps = 18/189 (9%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---L 126
G +R GI G + RI +++ I L R+ G D V L + + L
Sbjct: 144 GGHRIGIAGKIIMEGDRIKSVKH----ISFLNIRLSHQRRGCADKVLPYLIEREEVCHTL 199
Query: 127 FVGRPGVGKTTVMREIARVLSD---EFQKRVV-IVDTSNEIGGDG-DIPHSAIGTARRMQ 181
+ P GKTT++R++ R +SD F V +VD +EIGG +P + +G R
Sbjct: 200 IISPPRCGKTTLLRDLIRQISDGTASFPGVTVGVVDERSEIGGSYLGVPQNDLGI--RTD 257
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + + M+ + P VI VDEIG + A S+ G L+ T HG+ +E++
Sbjct: 258 VLDCCPKAEGMMMLIRAMSPRVIAVDEIGDYRDIRAIESVIHCGCRLLATVHGDSIEDVQ 317
Query: 242 KNPILSDLI 250
+ P+L L+
Sbjct: 318 RRPLLQKLV 326
>gi|336437972|ref|ZP_08617616.1| hypothetical protein HMPREF0990_00010 [Lachnospiraceae bacterium
1_1_57FAA]
gi|336019390|gb|EGN49115.1| hypothetical protein HMPREF0990_00010 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 162
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 43/130 (33%), Positives = 70/130 (53%), Gaps = 7/130 (5%)
Query: 126 LFVGRPGVGKTTVMREIARVLSD--EFQK--RVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
+ + P GKTT++R++ R +SD E+ K V +VD +EIGG I + +G R
Sbjct: 1 MIISPPRCGKTTLLRDLIRQISDGNEYVKGCSVGVVDERSEIGGCYMGIVQNNLGM--RT 58
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + MI + + P+V+ VDEIGT + HA + G LI + HG +E
Sbjct: 59 DVLDCCPKAEGMIMLIRSMSPQVVAVDEIGTAEDIHAIEYAMQCGCKLIASVHGMDMEEA 118
Query: 241 IKNPILSDLI 250
+ P+L ++I
Sbjct: 119 ARKPVLGEMI 128
>gi|302874798|ref|YP_003843431.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
gi|307690585|ref|ZP_07633031.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
gi|302577655|gb|ADL51667.1| stage III sporulation protein AA [Clostridium cellulovorans 743B]
Length = 307
Score = 61.6 bits (148), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 80/163 (49%), Gaps = 12/163 (7%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ-- 151
I L R+ R + G + V + + + I + + P GKTT++R+I R LSD
Sbjct: 108 IASLNIRMAREIYGCSNSVIEYILRDQGIYNTIIISPPKCGKTTMLRDITRQLSDGIADN 167
Query: 152 ----KRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIV 206
+RV ++D +EI +P +G R V + + ++ A+ P++I+
Sbjct: 168 NVSGRRVCVIDERSEIAACKLGVPEMDVGL--RTDVLDGCPKAIGIMMAIRTLAPDIIVC 225
Query: 207 DEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
DEIGTE + ++ S GV +I T HG+ +E++ I D+
Sbjct: 226 DEIGTEKDLNSIISACTCGVNIISTIHGQSIEDLYSKGISRDI 268
>gi|163816778|ref|ZP_02208141.1| hypothetical protein COPEUT_02968 [Coprococcus eutactus ATCC 27759]
gi|158448035|gb|EDP25030.1| stage III sporulation protein AA [Coprococcus eutactus ATCC 27759]
Length = 294
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 88/188 (46%), Gaps = 16/188 (8%)
Query: 61 ELEYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVY 116
E E Q V GG +R G+ G + +RI IR I L RV + G + V
Sbjct: 71 EDEIRQGFVTVCGG-HRVGVAGKIILDGNRIKCIRH----ISFLNIRVAHEIKGCSNRVM 125
Query: 117 DLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHS 172
+ G +L V P GKTT++R+I RV+S+ V +VD +EI IP +
Sbjct: 126 QYIVSGGRLLNTLIVSAPCHGKTTLLRDIIRVVSNS-GTTVGVVDERSEIAACYKGIPQN 184
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
+G R V + + M+ V PE+I VDEIG A+ A + G L+ TA
Sbjct: 185 DVGI--RTDVLDCCPKAAGMMMLVRTMAPELIAVDEIGGPADVDAIFGVVNCGCRLLATA 242
Query: 233 HGEWLENI 240
HG ++++
Sbjct: 243 HGYSIDDV 250
>gi|313114131|ref|ZP_07799683.1| putative stage III sporulation protein AA [Faecalibacterium cf.
prausnitzii KLE1255]
gi|310623540|gb|EFQ06943.1| putative stage III sporulation protein AA [Faecalibacterium cf.
prausnitzii KLE1255]
Length = 297
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 22/162 (13%)
Query: 97 IVGLTCRVGRAVSGHI--DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
+ GL R+ RAV + +++ L + +L VG P GKTT++R+IAR L+ Q+R
Sbjct: 122 VQGLNLRIARAVPVQLPNELLVQLKKHFIGMLVVGEPDSGKTTLLRQIARELAG-MQRRA 180
Query: 155 VIVDTSNEIGGDGD---IPH----SAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
+VD EI GD +P S I R +Q+ A+ P+VI++D
Sbjct: 181 CVVDERCEIFPPGDSEKMPPLDLLSGIPKERAVQM------------ALRTLSPQVILLD 228
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
E+GT AE A GV + + H +E + P + L
Sbjct: 229 ELGTLAETAALEQGFYSGVDFVASVHAASVEEAARRPQVQAL 270
>gi|283797254|ref|ZP_06346407.1| stage III sporulation protein AA [Clostridium sp. M62/1]
gi|291075104|gb|EFE12468.1| stage III sporulation protein AA [Clostridium sp. M62/1]
Length = 427
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 88/190 (46%), Gaps = 18/190 (9%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTC---RVGRAVSGHIDMVYDLL---HYGK--SI 125
G +R G+ G R SR AI +TC RV R + G D V L G+ +
Sbjct: 154 GGHRIGVAG---RAVTDGSRVKAIKPVTCLNVRVARQIRGCSDSVLPYLIDRDRGELYPV 210
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
L + P GKTT++R++ R +SD K V IVD +EI I + +G R
Sbjct: 211 LILSPPCCGKTTLLRDLVRKISDGCGYMEGKTVGIVDERSEIAACFQGIAQNDVGM--RS 268
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+V+ VDEIG + A R A G LI TAHG +++
Sbjct: 269 DVLDGCPKAQGMMMLIRSMAPQVLAVDEIGGREDLEALRYAAGCGCSLIATAHGTSYQDV 328
Query: 241 IKNPILSDLI 250
P +L
Sbjct: 329 EAKPAFRELF 338
>gi|15615360|ref|NP_243663.1| mutants block sporulation after engulfment [Bacillus halodurans
C-125]
gi|10175418|dbj|BAB06516.1| mutants block sporulation after engulfment [Bacillus halodurans
C-125]
Length = 309
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 74/134 (55%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKR------VVIVDTSNEIGGD-GDIPHSAIGT 176
+ L +G P GKTT++R++AR++S + ++ V IVD +EI +P +G
Sbjct: 143 NTLLIGPPQSGKTTLLRDLARLVSVGWSRKGIPPLKVGIVDERSEIAAAVKGVPQHELGM 202
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R+ V + + + M+ + + P+V+IVDEIG + + A + GV ++ TAHG
Sbjct: 203 --RVDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRKEDCVAIQEALHAGVKVMTTAHGYE 260
Query: 237 LENIIKNPILSDLI 250
LE + K P + +L+
Sbjct: 261 LEEVSKRPAIRELL 274
>gi|311069045|ref|YP_003973968.1| stage III sporulation protein AA [Bacillus atrophaeus 1942]
gi|419820311|ref|ZP_14343922.1| stage III sporulation protein AA [Bacillus atrophaeus C89]
gi|310869562|gb|ADP33037.1| stage III sporulation protein AA [Bacillus atrophaeus 1942]
gi|388475463|gb|EIM12175.1| stage III sporulation protein AA [Bacillus atrophaeus C89]
Length = 307
Score = 61.2 bits (147), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 69/129 (53%), Gaps = 7/129 (5%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
L +G P GKTT++R++AR+ S K + IVD +EI G IP G +R+
Sbjct: 140 LIIGPPQTGKTTLLRDLARLSSSGINKIPAKKTGIVDERSEIAGCLRGIPQHQFG--QRI 197
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + ++ + + PEVIIVDEIG ++ A GV +I +AHG + ++
Sbjct: 198 DVLDACPKAEGLMMMIRSMSPEVIIVDEIGRMEDSEAILEALHAGVSVIVSAHGWTISDL 257
Query: 241 IKNPILSDL 249
+K P L L
Sbjct: 258 MKRPSLKLL 266
>gi|167747013|ref|ZP_02419140.1| hypothetical protein ANACAC_01725 [Anaerostipes caccae DSM 14662]
gi|167653973|gb|EDR98102.1| stage III sporulation protein AA [Anaerostipes caccae DSM 14662]
Length = 310
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 91/184 (49%), Gaps = 13/184 (7%)
Query: 74 GDNRAGIEGTLH-RISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS-----ILF 127
G +R GI G + IR+ K I L RV V G + +++ H K +L
Sbjct: 100 GGHRVGIAGKVSIEDGEIRTMK-HITFLNIRVAHEVIGCAEGIFE--HCTKDGQLLPVLI 156
Query: 128 VGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPS 186
+ PG GKTT++R++ R+ SD + V +VD +EI +P + +G R V +
Sbjct: 157 ISPPGRGKTTLLRDMIRIASDGGET-VGVVDERSEIAASYMGVPQNKVGI--RTDVMDGC 213
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+ + M+ V + P VI VDEIG + + A A G L+ T HG+ +E + K P +
Sbjct: 214 PKSEGMMMLVRSMAPNVIAVDEIGKKEDVDAMLYSAYCGCTLMATIHGKDMEELKKVPYV 273
Query: 247 SDLI 250
+++
Sbjct: 274 GEMM 277
>gi|225388160|ref|ZP_03757884.1| hypothetical protein CLOSTASPAR_01895 [Clostridium asparagiforme
DSM 15981]
gi|225045777|gb|EEG56023.1| hypothetical protein CLOSTASPAR_01895 [Clostridium asparagiforme
DSM 15981]
Length = 363
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 61/215 (28%), Positives = 97/215 (45%), Gaps = 19/215 (8%)
Query: 51 YLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVS 109
Y+ S + E E Q + GG +R G+ G T+ +R K I + RV V
Sbjct: 92 YMSSYSLYAAEEELRQGFITVQGG-HRIGVAGRTVADRQGVRLMK-FISFVNVRVAHQVK 149
Query: 110 GHIDMVYDLLHYGK---------SILFVGRPGVGKTTVMREIARVLS--DEFQK--RVVI 156
G D + L+ + + L + P GKTT++R++ R +S + F V +
Sbjct: 150 GCADGIMRYLYARQPGQPGPHFCNTLIISPPRCGKTTLLRDVIRQVSAGNAFAPGMTVGV 209
Query: 157 VDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 215
VD +E+G +P + +G R V + + + M+ V + P+V+ VDEIG+ +
Sbjct: 210 VDERSELGACYQGVPQNDLGP--RTDVLDCCPKDQGMMMLVRSMAPQVVAVDEIGSAGDV 267
Query: 216 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A I G L T HG LE+I P L L+
Sbjct: 268 EAVGYIQSCGCALAATVHGASLEDIYSKPALGQLV 302
>gi|168333637|ref|ZP_02691897.1| stage III sporulation protein AA [Epulopiscium sp. 'N.t. morphotype
B']
Length = 313
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 80/162 (49%), Gaps = 10/162 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSD----E 149
I + R+ R V G + + ++ + I L V P GKTT++R++ R LS+ +
Sbjct: 120 ISAINIRIAREVVGAGNKIVPYIYKNRKICNTLIVSPPKCGKTTILRDVIRNLSNGESLD 179
Query: 150 FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
V IVD +EI IP + +G R V + + + + ++ + + PE+I VDE
Sbjct: 180 VSYHVGIVDERSEIAACYMGIPQNDVGI--RTDVLDSAPKAEGILMLLRSMSPEIIAVDE 237
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
IG + + A GV +I T HG L + + P+L D++
Sbjct: 238 IGRDEDYKAIFDALIVGVTVICTIHGSSLNDCLNKPLLKDML 279
>gi|408356526|ref|YP_006845057.1| stage III sporulation protein AA [Amphibacillus xylanus NBRC 15112]
gi|407727297|dbj|BAM47295.1| stage III sporulation protein AA [Amphibacillus xylanus NBRC 15112]
Length = 322
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 7/130 (5%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGDGD-IPHSAIGTARRM 180
L VG P GKTT++R+I+R++ + K+V IVD +EI G + IP +G +R
Sbjct: 143 LIVGPPQSGKTTLIRDISRLIGTGWGHMEAKKVGIVDERSEIAGSRNGIPFYQVG--KRT 200
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P++IIVDEIG+ + A + + GV L+ T H + ++I
Sbjct: 201 DVLDNCPKSEGMMLMIRSMSPDIIIVDEIGSVRDIEAIQEVIRSGVGLVCTLHSDSYQSI 260
Query: 241 IKNPILSDLI 250
++ L +I
Sbjct: 261 KQSKHLKPII 270
>gi|152976597|ref|YP_001376114.1| sporulation stage III protein AA [Bacillus cytotoxicus NVH 391-98]
gi|152025349|gb|ABS23119.1| Sporulation stage III protein AA [Bacillus cytotoxicus NVH 391-98]
Length = 307
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 124/265 (46%), Gaps = 26/265 (9%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYLGE-FGGKYLRSTEVSVEEL----E 63
++LP +R+ ++ + L E+ + +GR E G+ F +Y+ + E ++ L +
Sbjct: 6 EVLPKMMRELIEGCKEYNALEEIRVRIGRPLECIAHGKVFFHEYIVTPEDAMHLLNKLSQ 65
Query: 64 YAQSAVGE--------FGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM 114
++ + E G +R G+ G + SA++ + + R+ R G +
Sbjct: 66 FSIYTIEEELKRGYVTLRGGHRIGLAGKVITEKSAVKMIRD-VSSFNIRIARQKMGIAEP 124
Query: 115 VYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD 166
+ L+ + + + +G P GKTT++R++AR +S +V IVD +EI G
Sbjct: 125 LLSYLYESRWLNTMVIGPPQTGKTTLLRDVARCMSQGVGFANIPSCKVGIVDERSEIAGC 184
Query: 167 -GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
IP G R+ V + + + M+ + + P+++IVDEIG ++ A G
Sbjct: 185 VKGIPQYEFGP--RVDVLDACPKAEGMMMMIRSMSPDILIVDEIGRMEDSEAIMEAVHAG 242
Query: 226 VMLIGTAHGEWLENIIKNPILSDLI 250
V L +AHG ++I K P L ++
Sbjct: 243 VQLFISAHGFSFDDIRKRPSLKAVM 267
>gi|323485467|ref|ZP_08090813.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14163]
gi|323694458|ref|ZP_08108628.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14673]
gi|355628505|ref|ZP_09049787.1| stage III sporulation protein AA [Clostridium sp. 7_3_54FAA]
gi|323401115|gb|EGA93467.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14163]
gi|323501446|gb|EGB17338.1| stage III sporulation protein AA [Clostridium symbiosum WAL-14673]
gi|354819754|gb|EHF04192.1| stage III sporulation protein AA [Clostridium sp. 7_3_54FAA]
Length = 330
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/185 (27%), Positives = 81/185 (43%), Gaps = 16/185 (8%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS-----ILFV 128
G +R G+ G + + L R+ V G D + L+ K+ L +
Sbjct: 108 GGHRIGVAGRVILDKGTVKTIQPVTFLNIRLSHQVRGCADKIMPYLYDDKTGEFLHTLII 167
Query: 129 GRPGVGKTTVMREIARVLSD--------EFQKRVVIVDTSNEIGGDGD-IPHSAIGTARR 179
P GKTT++R+I R SD K V +VD +EIG IP + +G R
Sbjct: 168 SPPRCGKTTLLRDIVRQASDGGSSGKRVRAGKTVGVVDERSEIGACFQGIPQNDVGL--R 225
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
+ + + M+ + + P+V+ VDEIG + + A R + G ++ T HG +E+
Sbjct: 226 TDILDCCPKAAGMMMLIRSMAPDVVAVDEIGGDPDLEALRCVMNCGCRILATVHGTSMED 285
Query: 240 IIKNP 244
I P
Sbjct: 286 IRNKP 290
>gi|134298920|ref|YP_001112416.1| hypothetical protein Dred_1056 [Desulfotomaculum reducens MI-1]
gi|134051620|gb|ABO49591.1| conserved hypothetical protein [Desulfotomaculum reducens MI-1]
Length = 337
Score = 60.8 bits (146), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 62/189 (32%), Positives = 86/189 (45%), Gaps = 17/189 (8%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL-----HYGKSILF 127
G +R GI G L IR+ K I G R+ RAV G D V L + +IL
Sbjct: 115 GGHRVGITGKVLTDQGGIRNIK-YISGFNFRISRAVVGVADKVLPYLISSDGRFYHTIL- 172
Query: 128 VGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
V P GKTT++REI R LS+ + V +VD +EI G +P IG R
Sbjct: 173 VSPPRCGKTTMLREIIRRLSEGVPELGFSGVTVGVVDERSEIAGCYRGVPQRDIGP--RT 230
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + M+ + + P +I DEIG + + A + GV ++ T HG LE +
Sbjct: 231 DVLDACPKAPGMMMLLRSMGPMIIATDEIGRQEDVAALEEVLNAGVKVLSTVHGATLEEL 290
Query: 241 IKNPILSDL 249
P L L
Sbjct: 291 ADRPALQYL 299
>gi|225174900|ref|ZP_03728897.1| stage III sporulation protein AA [Dethiobacter alkaliphilus AHT 1]
gi|225169540|gb|EEG78337.1| stage III sporulation protein AA [Dethiobacter alkaliphilus AHT 1]
Length = 341
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 79/166 (47%), Gaps = 14/166 (8%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIARVLS--DE 149
I G+ R+ R V G + L+ K+ L + P GKTTV+R++AR+ D
Sbjct: 136 ISGINIRIARQVLGAGKQLLPSLYCQKTRRVRHTLIISAPQAGKTTVLRDLARLFGNGDA 195
Query: 150 FQKR----VVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 204
R V IVD +EI G +P +G R V + + + M+ V + P+++
Sbjct: 196 ASGRPAFNVGIVDERSEIAGCYQGVPQLDVGL--RSDVLDGCPKAEGMMMLVRSMSPQIV 253
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ DE+G +A A G ++ TAHG+ + + + P L+ L+
Sbjct: 254 VTDELGRPEDARAVEEAVNTGASILATAHGQSMTELFRRPSLAYLL 299
>gi|308174238|ref|YP_003920943.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens DSM 7]
gi|384160096|ref|YP_005542169.1| stage III sporulation protein AA [Bacillus amyloliquefaciens TA208]
gi|384165021|ref|YP_005546400.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens LL3]
gi|384169160|ref|YP_005550538.1| stage III sporulation protein AA [Bacillus amyloliquefaciens XH7]
gi|307607102|emb|CBI43473.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens DSM 7]
gi|328554184|gb|AEB24676.1| stage III sporulation protein AA [Bacillus amyloliquefaciens TA208]
gi|328912576|gb|AEB64172.1| ATP-binding stage III sporulation protein [Bacillus
amyloliquefaciens LL3]
gi|341828439|gb|AEK89690.1| stage III sporulation protein AA [Bacillus amyloliquefaciens XH7]
Length = 307
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 73/132 (55%), Gaps = 9/132 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV-----IVDTSNEIGGD-GDIPHSAIGTA 177
+ L +G P GKTT++R++AR LS KR+ I+D +EI G IP + G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLAR-LSSTGSKRIPAKKTGIIDERSEIAGCLRGIPQHSFG-- 194
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
RR+ V + + + ++ + + P+V+IVDEIG ++ A GV +I +AHG +
Sbjct: 195 RRVDVLDACPKAEGLMMMIRSMSPDVMIVDEIGRIEDSEALMEALHAGVSVIVSAHGWNM 254
Query: 238 ENIIKNPILSDL 249
++++K P L L
Sbjct: 255 KDLVKRPSLKML 266
>gi|410460620|ref|ZP_11314295.1| stage III sporulation protein AA [Bacillus azotoformans LMG 9581]
gi|409926878|gb|EKN64030.1| stage III sporulation protein AA [Bacillus azotoformans LMG 9581]
Length = 312
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILF 127
G +R G+ G + ++ AI+ I R+ + G D + L+ G+ + +
Sbjct: 88 GGHRVGLAGKVITEKGQVKAIKD----ITSYNIRIAKEKVGIADPLTPYLYRGRWLNTII 143
Query: 128 VGRPGVGKTTVMREIARVLS------DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
G P GKTT++R++AR++S + +V IVD +EI G IP G R+
Sbjct: 144 YGPPQTGKTTLLRDMARMMSTGSYDSNIPSFKVGIVDERSEIAGCVKGIPQHQFGP--RI 201
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P++++VDEIG + A GV L + HG +E++
Sbjct: 202 DVLDACPKAEGMMMLIRSMSPDILVVDEIGRMEDTEAILEAVNAGVALFISVHGSSMEDL 261
Query: 241 IKNPILSDLI 250
K P + L+
Sbjct: 262 YKRPSIKPLM 271
>gi|384456035|ref|YP_005668630.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Yit]
gi|418015948|ref|ZP_12655513.1| stage 3 sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|345506283|gb|EGX28577.1| stage 3 sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-NYU]
gi|346984378|dbj|BAK80054.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Yit]
Length = 271
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 78/162 (48%), Gaps = 11/162 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQK- 152
I L R+ + V G + ++ G IL + P GKTT++R++++++S+
Sbjct: 83 ISSLNIRICKEVMGFGRKFINYIYKGGEILNTLIISPPKCGKTTLLRDLSKIISNGDSPL 142
Query: 153 ----RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
+V ++D +EI IP +G R V + L+ K +I A+ + PEVII D
Sbjct: 143 NRGFKVSVIDERSEIAASFRGIPQLDVGI--RTDVYDNCLKSKGIILAIRSMAPEVIICD 200
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
EIGT + + GV +I T HG E+ +S+L
Sbjct: 201 EIGTREDFESVLIAYNSGVSIISTIHGSSEEDFYNKLRMSNL 242
>gi|342732644|ref|YP_004771483.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|417959181|ref|ZP_12602037.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-1]
gi|417965028|ref|ZP_12606647.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-4]
gi|417968209|ref|ZP_12609250.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-co]
gi|418372898|ref|ZP_12964990.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-mouse-SU]
gi|342330099|dbj|BAK56741.1| stage III sporulation protein AA [Candidatus Arthromitus sp.
SFB-mouse-Japan]
gi|380334058|gb|EIA24534.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-1]
gi|380339205|gb|EIA27984.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-4]
gi|380340147|gb|EIA28776.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-co]
gi|380342567|gb|EIA31012.1| Stage III sporulation protein AA, SpoIIIAA [Candidatus Arthromitus
sp. SFB-mouse-SU]
Length = 266
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 74 GDNRAGIEGT-LHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL---FVG 129
G +R GI G + ++ K I L R+ + V G + ++ G IL +
Sbjct: 55 GGHRVGITGEWIFENGQVKYLKN-ISSLNIRICKEVMGFGRKFINYIYKGGEILNTLIIS 113
Query: 130 RPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVP 183
P GKTT++R++++++S+ +V ++D +EI IP +G R V
Sbjct: 114 PPKCGKTTLLRDLSKIISNGDSPLNRGFKVSVIDERSEIAASFRGIPQLDVGI--RTDVY 171
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
+ L+ K +I A+ + PEVII DEIGT + + GV +I T HG E+
Sbjct: 172 DNCLKSKGIILAIRSMAPEVIICDEIGTREDFESVLIAYNSGVSIISTIHGSSEEDFYNK 231
Query: 244 PILSDL 249
+S+L
Sbjct: 232 LRMSNL 237
>gi|331091290|ref|ZP_08340131.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_46FAA]
gi|330404737|gb|EGG84276.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_46FAA]
Length = 307
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 97/214 (45%), Gaps = 21/214 (9%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ + + E E Q + GG +R G+ G + ++S K I + RV V
Sbjct: 65 EYISNYSLYAYENEMRQGFITIEGG-HRVGMAGKVVMEEGKVKSLK-YISSINIRVAHEV 122
Query: 109 SGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVIVDTSN 161
G D ++ + + I L + P GKTT++R++ R +SD + V +VD +
Sbjct: 123 RGCADKLFPYITKERQICHTLIISPPRCGKTTLLRDMIRQISDGNRWVKGVPVGVVDERS 182
Query: 162 EIGGDGDIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E+GG +GTA+ R + + + M+ + + P+VI VDEIG E
Sbjct: 183 ELGG------CYMGTAQNELGIRTDILDCCPKADGMLMLIRSMAPQVIAVDEIGAREEIR 236
Query: 217 ACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A G ++ TAHG +E + K P LI
Sbjct: 237 AIEYALHCGCKMLATAHGVSMEEMKKKPFFEQLI 270
>gi|220929335|ref|YP_002506244.1| stage III sporulation protein AA [Clostridium cellulolyticum H10]
gi|219999663|gb|ACL76264.1| stage III sporulation protein AA [Clostridium cellulolyticum H10]
Length = 331
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 72/147 (48%), Gaps = 13/147 (8%)
Query: 99 GLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSD---EFQ 151
G+ R+ R V G + + + S L VG P GKTT++R+++R+LS E+
Sbjct: 135 GINIRIAREVKGCANHIIKYIIKNNSDTYNTLIVGPPQCGKTTILRDLSRMLSSGETEYG 194
Query: 152 ---KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
+V IVD +EI +P S +G R V + + M + + PE+II D
Sbjct: 195 FSGMKVGIVDERSEIAACCKGVPQSDVGY--RTDVMDGCPKALGMEMLLRSMSPEIIITD 252
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHG 234
EIGT + A + G+ +I +AHG
Sbjct: 253 EIGTHGDKEAILKVLNSGIKIIASAHG 279
>gi|169831169|ref|YP_001717151.1| ATPase AAA [Candidatus Desulforudis audaxviator MP104C]
gi|169638013|gb|ACA59519.1| AAA ATPase [Candidatus Desulforudis audaxviator MP104C]
Length = 332
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/185 (28%), Positives = 86/185 (46%), Gaps = 15/185 (8%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK----SILFV 128
G +R G+ G + A+R+ K + G+ R+ R V G D V L +G + L +
Sbjct: 108 GGHRVGLAGRVVTDGGAVRTMK-HLSGVNFRISREVPGAADRVLPWLVHGSRATYNTLII 166
Query: 129 GRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 181
PG GKTT++R++ R S + V +VD +EI G +P +G R
Sbjct: 167 SPPGCGKTTLLRDLVRQFSAGVPRLGFAGLTVGVVDERSEIAGCYRGVPQLDVGP--RTD 224
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + + M+ + P+VI DEIG + A + GV ++ TAH L+ +
Sbjct: 225 VLDGCPKAEGMMMLLRAFSPDVIATDEIGRREDVTALEEMLNAGVKILATAHAASLDELR 284
Query: 242 KNPIL 246
P+L
Sbjct: 285 GRPVL 289
>gi|374324640|ref|YP_005077769.1| stage III sporulation protein AA [Paenibacillus terrae HPL-003]
gi|357203649|gb|AET61546.1| stage III sporulation protein AA [Paenibacillus terrae HPL-003]
Length = 331
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIARVLS---- 147
I R+ RA+ G D + + KS L + P GKTT++R++AR LS
Sbjct: 120 ISSFNVRIARAIPGIADRILPYVADRKSGKILHTLILSPPQHGKTTLLRDLARQLSYGGL 179
Query: 148 -----DEFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
+V I+D +EI G IP +G R V + + + M+ + + P
Sbjct: 180 ESNGGRRSGLKVGIIDERSEIAGSHKGIPGFDVGP--RTDVLDGCPKAEGMMMMIRSMSP 237
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 258
+V+IVDEIG +A A R G+ +I +AHG + + P + L G + L
Sbjct: 238 DVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMATRPAFAGLTTGQELFQL 294
>gi|428279930|ref|YP_005561665.1| stage III sporulation protein AA [Bacillus subtilis subsp. natto
BEST195]
gi|291484887|dbj|BAI85962.1| stage III sporulation protein AA [Bacillus subtilis subsp. natto
BEST195]
Length = 307
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS +K +
Sbjct: 109 IASFNIRIARQKLGIAEPLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKNM 167
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEV+IVDE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 225
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 226 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|239827682|ref|YP_002950306.1| stage III sporulation protein AA [Geobacillus sp. WCH70]
gi|239807975|gb|ACS25040.1| stage III sporulation protein AA [Geobacillus sp. WCH70]
Length = 308
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 91/190 (47%), Gaps = 19/190 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILF 127
G +R G+ G + + AIR + R+ + G + + ++ G+ + +
Sbjct: 86 GGHRVGLAGKVVTDGGSVKAIRH----VTSFNIRIAKQRIGIAEPLLPYVYNGRWYNTMI 141
Query: 128 VGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGD-GDIPHSAIGTARRM 180
+G P GKTT++R+ AR++S ++V IVD +EI G IP +G R+
Sbjct: 142 IGSPQTGKTTLLRDAARMISMGINEKHIPSQKVGIVDERSEIAGCVKGIPQFELGN--RV 199
Query: 181 QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
V + + + M+ + + P+V+IVDEIG ++ A GV + T HG +++
Sbjct: 200 DVLDACPKAEGMMMMIRSMSPDVLIVDEIGRAEDSEAILEAVNAGVCIWTTVHGRKWKDV 259
Query: 241 IKNPILSDLI 250
+ P L +I
Sbjct: 260 FQRPTLRPII 269
>gi|404489858|ref|YP_006713964.1| stage III sporulation protein SpoIIIAA [Bacillus licheniformis DSM
13 = ATCC 14580]
gi|52348854|gb|AAU41488.1| stage III sporulation protein SpoIIIAA [Bacillus licheniformis DSM
13 = ATCC 14580]
Length = 309
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 124 SILFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ L +G P GKTT++R++AR++S + K+V IVD +EI G IP +G
Sbjct: 140 NTLIIGPPQTGKTTLLRDLARLISSGSGNAPAKKVGIVDERSEIAGCVNGIPQYRLGD-- 197
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R + + + + ++ + + PEV+I DEIG +A A GV +I +AHG
Sbjct: 198 RADILDACPKAEGLMMMIRSMSPEVMIADEIGRMEDAEALLEAVHAGVTVIVSAHGYTYA 257
Query: 239 NIIKNPILSDL 249
++ + P L L
Sbjct: 258 DLARRPSLKML 268
>gi|366166835|ref|ZP_09466590.1| stage III sporulation protein AA [Acetivibrio cellulolyticus CD2]
Length = 340
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 79/177 (44%), Gaps = 23/177 (12%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS----I 125
G +R GI G + +I IR I GL R+ R V G + + G +
Sbjct: 115 GGHRVGITGRVVLEGTQIKNIRD----ISGLNMRISREVYGCSSKILRYIVQGDNDVYNT 170
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG--DGDIPHSAIGTA 177
L V P GKTT++R++AR LSD +V +VD +EI G P +G
Sbjct: 171 LIVSPPKCGKTTILRDLARNLSDGVDGFAIRGLKVGVVDERSEIAACFKGS-PQKEVGA- 228
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
R V + + M + + P+VII DEIG + A + GV +I TAHG
Sbjct: 229 -RTDVLDACPKQLGMSMMLRSMSPDVIITDEIGCNGDKEALMQVLNAGVKIITTAHG 284
>gi|16079499|ref|NP_390323.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|221310366|ref|ZP_03592213.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. 168]
gi|221314690|ref|ZP_03596495.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. NCIB 3610]
gi|221319613|ref|ZP_03600907.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. JH642]
gi|221323889|ref|ZP_03605183.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SMY]
gi|418032384|ref|ZP_12670867.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SC-8]
gi|449094940|ref|YP_007427431.1| ATP-binding stage III sporulation protein [Bacillus subtilis XF-1]
gi|452915262|ref|ZP_21963888.1| stage III sporulation protein AA [Bacillus subtilis MB73/2]
gi|730774|sp|Q01367.1|SP3AA_BACSU RecName: Full=Stage III sporulation protein AA
gi|581722|emb|CAA43959.1| SpoIIIAA protein [Bacillus subtilis subsp. subtilis str. 168]
gi|1000359|gb|AAA76720.1| SpoIIIAA [Bacillus subtilis subsp. subtilis str. JH642]
gi|1303904|dbj|BAA12560.1| SpoIIIAA [Bacillus subtilis]
gi|2634877|emb|CAB14374.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
subtilis str. 168]
gi|351471247|gb|EHA31368.1| mutants block sporulation after engulfment (stage III sporulation)
[Bacillus subtilis subsp. subtilis str. SC-8]
gi|449028855|gb|AGE64094.1| ATP-binding stage III sporulation protein [Bacillus subtilis XF-1]
gi|452115610|gb|EME06006.1| stage III sporulation protein AA [Bacillus subtilis MB73/2]
Length = 307
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS +K +
Sbjct: 109 IASFNIRIARQKLGIAEPLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKNM 167
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEV+IVDE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 225
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 226 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|52080976|ref|YP_079767.1| hypothetical protein BL01540 [Bacillus licheniformis DSM 13 = ATCC
14580]
gi|319645066|ref|ZP_07999299.1| SpoIIIAA protein [Bacillus sp. BT1B_CT2]
gi|423682948|ref|ZP_17657787.1| hypothetical protein MUY_02800 [Bacillus licheniformis WX-02]
gi|52004187|gb|AAU24129.1| SpoIIIAA [Bacillus licheniformis DSM 13 = ATCC 14580]
gi|317392875|gb|EFV73669.1| SpoIIIAA protein [Bacillus sp. BT1B_CT2]
gi|383439722|gb|EID47497.1| hypothetical protein MUY_02800 [Bacillus licheniformis WX-02]
Length = 307
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 124 SILFVGRPGVGKTTVMREIARVLS----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ L +G P GKTT++R++AR++S + K+V IVD +EI G IP +G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLARLISSGSGNAPAKKVGIVDERSEIAGCVNGIPQYRLGD-- 195
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R + + + + ++ + + PEV+I DEIG +A A GV +I +AHG
Sbjct: 196 RADILDACPKAEGLMMMIRSMSPEVMIADEIGRMEDAEALLEAVHAGVTVIVSAHGYTYA 255
Query: 239 NIIKNPILSDL 249
++ + P L L
Sbjct: 256 DLARRPSLKML 266
>gi|403070093|ref|ZP_10911425.1| stage III sporulation protein AA [Oceanobacillus sp. Ndiop]
Length = 325
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 87/186 (46%), Gaps = 13/186 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGR----AVSGHIDMVYDLLHYGKSILFVG 129
G +R GI G + S I R+ + + +G + ++ + + L VG
Sbjct: 87 GGHRVGIAGRVITSSGKVKALQNITFFNIRIAKEKIGSATGLVQHIFSRKYL--NTLIVG 144
Query: 130 RPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPE 184
P GKTT++R++ R+++ + K +V ++D +EIG +P +G R V +
Sbjct: 145 PPQTGKTTLIRDLTRLIASGYGKISPRKVGVIDERSEIGASLKGVPQHNLGL--RTDVLD 202
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ M+ + + P+V++VDEIG+ + A GV ++ + HG L+ + K P
Sbjct: 203 ACPKSDGMMMMIRSMSPDVLVVDEIGSGEDIAALMEAINAGVTIVCSIHGNDLKELKKRP 262
Query: 245 ILSDLI 250
L L
Sbjct: 263 SLQQLF 268
>gi|402776705|ref|YP_006630649.1| ATP-binding stage III sporulation protein [Bacillus subtilis QB928]
gi|402481885|gb|AFQ58394.1| ATP-binding stage III sporulation protein [Bacillus subtilis QB928]
Length = 308
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS +K +
Sbjct: 110 IASFNIRIARQKLGIAEPLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKNM 168
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEV+IVDE
Sbjct: 169 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 226
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 227 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 267
>gi|407959688|dbj|BAM52928.1| ATP-binding stage III sporulation protein [Bacillus subtilis
BEST7613]
gi|407965263|dbj|BAM58502.1| ATP-binding stage III sporulation protein [Bacillus subtilis
BEST7003]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS +K +
Sbjct: 109 IASFNIRIARQKLGIAEPLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKNM 167
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEV+IVDE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 225
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 226 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|331084722|ref|ZP_08333810.1| stage III sporulation protein AA [Lachnospiraceae bacterium
9_1_43BFAA]
gi|330410816|gb|EGG90238.1| stage III sporulation protein AA [Lachnospiraceae bacterium
9_1_43BFAA]
Length = 321
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 96/215 (44%), Gaps = 25/215 (11%)
Query: 51 YLRSTEVSVEELEYAQSAVGEFGGDNRAGI-------EGTLHRISAIRSRKGAIVGLTCR 103
Y+ S + E E Q + GG +R G+ +GT+ I I S + R
Sbjct: 75 YISSYSLYAFEEELRQGFLTVEGG-HRVGMAGKVIMDQGTIKNIQYISS-------VNIR 126
Query: 104 VGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVI 156
V V V L Y + + L + PG GKTT++R++ R +SD + + V +
Sbjct: 127 VAHEVKDCAGKVLPYLTYDQQLYHTLIISPPGCGKTTLLRDLIRQISDGNRWIQGESVGV 186
Query: 157 VDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 215
VD +E+G I + +G R + + + + M+ + + P+++ VDEIG +
Sbjct: 187 VDERSELGACHLGIAQNELGI--RTDILDGCPKAEGMLMLIRSMAPKILAVDEIGAPEDI 244
Query: 216 HACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
HA G ++ T HG + + K P+L LI
Sbjct: 245 HAMEYAMHCGCRMLATVHGTSMAEVQKKPVLQQLI 279
>gi|384176064|ref|YP_005557449.1| stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349595288|gb|AEP91475.1| stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 307
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS +K +
Sbjct: 109 IASFNIRIARQKLGIAEPLLPYLYQNSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKSM 167
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEV+IVDE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 225
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 226 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|417961837|ref|ZP_12604170.1| Stage III sporulation protein AA, partial [Candidatus Arthromitus
sp. SFB-2]
gi|380332103|gb|EIA23008.1| Stage III sporulation protein AA, partial [Candidatus Arthromitus
sp. SFB-2]
Length = 186
Score = 59.3 bits (142), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 77/159 (48%), Gaps = 11/159 (6%)
Query: 100 LTCRVGRAVSGHIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQK---- 152
L R+ + V G + ++ G IL + P GKTT++R++++++S+
Sbjct: 1 LNIRICKEVMGFGRKFINYIYKGGEILNTLIISPPKCGKTTLLRDLSKIISNGDSPLNRG 60
Query: 153 -RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIG 210
+V ++D +EI IP +G R V + L+ K +I A+ + PEVII DEIG
Sbjct: 61 FKVSVIDERSEIAASFRGIPQLDVGI--RTDVYDNCLKSKGIILAIRSMAPEVIICDEIG 118
Query: 211 TEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
T + + GV +I T HG E+ +S+L
Sbjct: 119 TREDFESVLIAYNSGVSIISTIHGSSEEDFYNKLRMSNL 157
>gi|386759038|ref|YP_006232254.1| ATP-binding stage III sporulation protein [Bacillus sp. JS]
gi|384932320|gb|AFI28998.1| ATP-binding stage III sporulation protein [Bacillus sp. JS]
Length = 307
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS + R+
Sbjct: 109 IASFNIRIARQKLGIAEPLLPYLYQTSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKNRM 167
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEV+IVDE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 225
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 226 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|350266640|ref|YP_004877947.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349599527|gb|AEP87315.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 307
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSD----EF 150
I R+ R G + + L+ + L +G P GKTT++R++AR+ S
Sbjct: 109 ITSFNIRIARQKLGIAEPLLPFLYRESWLNTLIIGPPQTGKTTLLRDLARLSSTGKNHML 168
Query: 151 QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
+ IVD +EI G IP G +R+ V + + + ++ + + PEVIIVDEI
Sbjct: 169 PVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEI 226
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
G + A GV +I +AHG L +++K P L L
Sbjct: 227 GRIEDTDALLEALHAGVSVIVSAHGWSLSDLMKRPSLKRL 266
>gi|338812834|ref|ZP_08624987.1| stage III sporulation protein AA [Acetonema longum DSM 6540]
gi|337275133|gb|EGO63617.1| stage III sporulation protein AA [Acetonema longum DSM 6540]
Length = 336
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/188 (27%), Positives = 88/188 (46%), Gaps = 13/188 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSG--HIDMVYDLLHYGK--SILFVG 129
G +R G+ G S I L R+ R + G +I M Y + + K + L +
Sbjct: 108 GGHRIGVAGQAILESGQLKALKNISSLNIRIARPIPGAANIIMPYVIQGHNKVYNTLIIS 167
Query: 130 RPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTARRMQV 182
P GKTTV+R++ R LS + +V +VD +EI +P +G R+ +
Sbjct: 168 PPRCGKTTVLRDLTRQLSSGVSQYGFAGVQVGLVDERSEIAACYQGVPTVEVGP--RVDI 225
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + M+ + + P+VI+ DE+G+E + A GV +I + HG+ +I+
Sbjct: 226 LDGCPKAIGMLMLIRSMSPQVIVTDELGSEEDVRAVNEALHAGVSVIASIHGQNATDILH 285
Query: 243 NPILSDLI 250
P S+LI
Sbjct: 286 RPCSSELI 293
>gi|435853281|ref|YP_007314600.1| stage III sporulation protein AA [Halobacteroides halobius DSM
5150]
gi|433669692|gb|AGB40507.1| stage III sporulation protein AA [Halobacteroides halobius DSM
5150]
Length = 317
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 90/199 (45%), Gaps = 16/199 (8%)
Query: 63 EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG 122
E +S G +R G+ G + R A R I L R + V G + V + + G
Sbjct: 96 EELRSGYLTLSGGHRVGLVGQVIRDRAKIKRIKHIAALNIRFCQEVIGAANGVINQIING 155
Query: 123 KS----ILFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGDGD-IPHS 172
+ L + P GKTT++R++ R +S+ K +V +VD +EIGG + +
Sbjct: 156 SNDIYNTLIISPPRCGKTTLLRDLVRQISNGIPKQFNGLKVGVVDERSEIGGAYQGVAQN 215
Query: 173 AIGTARRM--QVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 230
IG + + P+P + ++ + + P VI+ DEIGT+ + GV +I
Sbjct: 216 QIGIRTDLLDRAPKP----EGILLLIRSMSPNVIVTDEIGTKEDVDILLEALNAGVRVIT 271
Query: 231 TAHGEWLENIIKNPILSDL 249
T HG L + P L+ L
Sbjct: 272 TVHGSNLAEVKSRPSLAKL 290
>gi|398817112|ref|ZP_10575743.1| stage III sporulation protein AA [Brevibacillus sp. BC25]
gi|398030914|gb|EJL24313.1| stage III sporulation protein AA [Brevibacillus sp. BC25]
Length = 320
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 89/189 (47%), Gaps = 18/189 (9%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD-LLHYGK--SIL 126
G +R GI G + + IR + R+ R G V L GK + L
Sbjct: 98 GGHRIGIAGKVVLDKGEVKGIRD----VTSFNIRIAREKKGAARKVMPYLFEDGKLLNTL 153
Query: 127 FVGRPGVGKTTVMREIARVLS--DEFQ--KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQ 181
+ P GKTT++R++AR +S E+ ++V IVD +E+ G +P +G R
Sbjct: 154 LISPPQCGKTTLLRDMARTISYGSEWSSSRKVGIVDERSELAGCLQGVPQRDVGP--RTD 211
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + M+ + + P+V+IVDE+G + A GV +I +AHG ++ +
Sbjct: 212 VLDACPKAAGMMMMIRSMSPDVLIVDEVGRTEDGDAVWEAIHAGVAVICSAHGASVKEVA 271
Query: 242 KNPILSDLI 250
+ P+L LI
Sbjct: 272 ERPMLGKLI 280
>gi|397906464|ref|ZP_10507264.1| Stage III sporulation protein AA [Caloramator australicus RC3]
gi|397160421|emb|CCJ34601.1| Stage III sporulation protein AA [Caloramator australicus RC3]
Length = 311
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 13/177 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG--KSILFVGR 130
G +R GI G T+ I++ K I L R+ R + G D + L+ K L +
Sbjct: 101 GGHRVGIVGRTVLGSEGIKTLKN-ISALNVRIAREIKGCSDAIVKKLYSDGIKHTLIISP 159
Query: 131 PGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTARRMQVP 183
PG GKTT++R+I R LSD ++ R+ +VD EI +P +G R V
Sbjct: 160 PGCGKTTLLRDIIRNLSDGNKRLNVRGYRIGVVDERGEIAACHQGVPQLDVGL--RTDVL 217
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
+ + + + + PE+I VDEIG + A + + GV +I TAH + I
Sbjct: 218 DSCPKTLGIYMLLRSMGPEIIAVDEIGGLDDTKAIQDALKAGVKIIATAHAGTFDEI 274
>gi|317128413|ref|YP_004094695.1| stage III sporulation protein AA [Bacillus cellulosilyticus DSM
2522]
gi|315473361|gb|ADU29964.1| stage III sporulation protein AA [Bacillus cellulosilyticus DSM
2522]
Length = 310
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD-GDIPHSAIGTAR 178
L +G P GKTT++R++AR +S + R + I+D +EI G +P G
Sbjct: 146 LIIGPPKSGKTTLLRDLAREISIGSKSRKIEPKNVGIIDERSEIAGSVKGVPQHDFGV-- 203
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
++ + + + + ++ + + PEV+IVDEIG + + A GV + + HGE L
Sbjct: 204 KIDILDACPKAEGLMMMIRSMSPEVLIVDEIGRKEDCEAIMEAVHAGVTIFASVHGENLN 263
Query: 239 NIIKNPILSDLI 250
++ P ++ LI
Sbjct: 264 DVKSRPTIARLI 275
>gi|373115236|ref|ZP_09529412.1| stage III sporulation protein AA [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670528|gb|EHO35607.1| stage III sporulation protein AA [Lachnospiraceae bacterium
7_1_58FAA]
Length = 305
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 74 GDNRAGIEGT-LHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG---KSILFVG 129
G +R GI G+ + R +R+ + + L RV R V G V D L G +S L +
Sbjct: 98 GGHRIGICGSGVVRDGEVRNLR-QLSSLAIRVAREVPGLSAAVLDRLWSGGVLQSTLLLS 156
Query: 130 RPGVGKTTVMREIARVLSDE---FQKRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPE 184
PG GKTT++R++ R +SD RV + D E+ G+ P +IG R+ V +
Sbjct: 157 PPGGGKTTLLRDLIRAVSDGEGGPALRVGVADERGELAAMYQGE-PQFSIG--RQTDVLD 213
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ ++ + P+V+ DEI +A A A GV L+ TAH LE + P
Sbjct: 214 GCPKGPALLMLLRGMNPQVLAADEITAPEDAAALEMAANCGVSLLCTAHAGSLEELKARP 273
Query: 245 ILSDLI 250
+ L+
Sbjct: 274 LYRRLL 279
>gi|365842271|ref|ZP_09383300.1| putative stage III sporulation protein AA [Flavonifractor plautii
ATCC 29863]
gi|364576112|gb|EHM53459.1| putative stage III sporulation protein AA [Flavonifractor plautii
ATCC 29863]
Length = 305
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/186 (30%), Positives = 88/186 (47%), Gaps = 13/186 (6%)
Query: 74 GDNRAGIEGT-LHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYG---KSILFVG 129
G +R GI G+ + R +R+ + + L RV R V G V D L G +S L +
Sbjct: 98 GGHRIGICGSGVVRDGEVRNLR-QLSSLAIRVAREVPGLSAAVLDRLWSGGVLQSTLLLS 156
Query: 130 RPGVGKTTVMREIARVLSDE---FQKRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPE 184
PG GKTT++R++ R +SD RV + D E+ G+ P +IG R+ V +
Sbjct: 157 PPGGGKTTLLRDLIRAVSDGEGGPALRVGVADERGELAAMYQGE-PQFSIG--RQTDVLD 213
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ ++ + P+V+ DEI +A A A GV L+ TAH LE + P
Sbjct: 214 GCPKGPALLMLLRGMNPQVLAADEITAPEDAAALEMAANCGVSLLCTAHAGSLEELKARP 273
Query: 245 ILSDLI 250
+ L+
Sbjct: 274 LYRRLL 279
>gi|160880656|ref|YP_001559624.1| stage III sporulation protein AA [Clostridium phytofermentans ISDg]
gi|160429322|gb|ABX42885.1| stage III sporulation protein AA [Clostridium phytofermentans ISDg]
Length = 322
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 97/216 (44%), Gaps = 19/216 (8%)
Query: 50 KYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAV 108
+Y+ + + E E Q + GG +R GI G + I+S K I + R+ V
Sbjct: 77 EYISNYSLYAFEEELKQGFITIAGG-HRIGIAGKVILEEGKIKSMK-YISFINIRLSHQV 134
Query: 109 SGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQKR----------VV 155
G ++V + SI L + PG GKTT++R++ R LSD Q V
Sbjct: 135 KGCANLVMPYILRDNSIYHTLIISPPGCGKTTLLRDVIRQLSDGEQDTKGGSYREGIPVG 194
Query: 156 IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAE 214
+VD +EI P + +G R V + + K M+ + + P V+ VDEIG +
Sbjct: 195 VVDERSEIAACYMGTPQNDLGI--RTDVLDCCPKAKGMMLLIRSMSPSVLAVDEIGLGED 252
Query: 215 AHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A G+ +I T HG ++ + P+L +LI
Sbjct: 253 IEAIHYAMGCGIKMIATVHGGTIDEVRDKPLLGELI 288
>gi|321311927|ref|YP_004204214.1| stage III sporulation protein AA [Bacillus subtilis BSn5]
gi|320018201|gb|ADV93187.1| stage III sporulation protein AA [Bacillus subtilis BSn5]
Length = 307
Score = 58.9 bits (141), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS +K +
Sbjct: 109 IASFNIRIARQKLGIAEPLLPYLYQSSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKPM 167
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEV+IVDE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 225
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 226 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|325661685|ref|ZP_08150308.1| stage III sporulation protein AA [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471938|gb|EGC75153.1| stage III sporulation protein AA [Lachnospiraceae bacterium
4_1_37FAA]
Length = 321
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/219 (26%), Positives = 96/219 (43%), Gaps = 33/219 (15%)
Query: 51 YLRSTEVSVEELEYAQSAVGEFGGDNRAGI-------EGTLHRISAIRSRKGAIVGLTCR 103
Y+ S + E E Q + GG +R G+ +GT+ I I S + R
Sbjct: 75 YISSYSLYAFEEELRQGFLTVEGG-HRVGMAGKVIMDQGTIKNIQYISS-------VNIR 126
Query: 104 VGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQ----KRVVI 156
V V V L Y + + L + PG GKTT++R++ R +SD + + V +
Sbjct: 127 VAHEVKDCAGKVLPYLTYDQQLYHTLIISPPGCGKTTLLRDLIRQISDGNRWIQGESVGV 186
Query: 157 VDTSNEIGGDGDIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 211
VD +E+G +G A+ R + + + + M+ + + P+++ VDEIG
Sbjct: 187 VDERSELGA------CHLGVAQNELGIRTDILDGCPKAEGMLMLIRSMAPKILAVDEIGA 240
Query: 212 EAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ HA G ++ T HG + + K P+L LI
Sbjct: 241 PEDIHAMEYAMHCGCRMLATVHGTSMAEVQKKPVLQQLI 279
>gi|296333400|ref|ZP_06875853.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305675094|ref|YP_003866766.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296149598|gb|EFG90494.1| stage III sporulation protein AA [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305413338|gb|ADM38457.1| ATP-binding stage III sporulation protein [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 307
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 79/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS + +
Sbjct: 109 ITSFNIRIARQKLGIAEPLLPFLYRDSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKNHI 167
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEVIIVDE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDE 225
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 226 IGRVEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|390453349|ref|ZP_10238877.1| stage III sporulation protein AA [Paenibacillus peoriae KCTC 3763]
Length = 331
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIARVLS---- 147
I R+ RA+ G D + + KS L + P GKTT++R++AR LS
Sbjct: 120 ISSFNVRIARAIPGVADRILPYVADQKSGKVRHTLILSPPQHGKTTLLRDLARQLSYGGV 179
Query: 148 -----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
+V I+D +EI G IP +G R V + + + M+ + + P
Sbjct: 180 GSNGGRRSGLKVGIIDERSEIAGSHKGIPGFDVGP--RTDVLDGCPKAEGMMMMIRSMSP 237
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 258
+V+IVDEIG +A A R G+ +I +AHG + + L+ L G + L
Sbjct: 238 DVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMATRSALAGLTAGQELFQL 294
>gi|336434712|ref|ZP_08614434.1| stage III sporulation protein AA [Lachnospiraceae bacterium
1_4_56FAA]
gi|336008491|gb|EGN38507.1| stage III sporulation protein AA [Lachnospiraceae bacterium
1_4_56FAA]
Length = 313
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 78/283 (27%), Positives = 122/283 (43%), Gaps = 52/283 (18%)
Query: 7 FWQILPSDLRDRLQNDSKRGQLLEVILDLGRLPEARYL-----------------GEFGG 49
+QIL +R L+ +S LD RL E R GE G
Sbjct: 10 IYQILAGSIRKILERES---------LDFSRLQEIRLRVGKPLLVICENTERILPGEDGA 60
Query: 50 KYLRSTEVSVEELEY-AQSAVGEFGGDNRAG---IEGTLHRI----------SAIRSRKG 95
YL + E E ++Y ++ ++ + + R G IEG HRI + I++ +
Sbjct: 61 PYLVTKEEIRETMDYISRYSLYAYETELRQGFLTIEGG-HRIGVSGKVIVEGNKIKNMQ- 118
Query: 96 AIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSD--EF 150
I + R V G D V + + + L + P GKTT++R++ R +SD +
Sbjct: 119 YISSVNIRAAHEVIGCADPVMRYITKNREVCHTLIISPPCCGKTTLIRDMIRQISDGNAY 178
Query: 151 QK--RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
K V +VD +E+GG I + IG R + + + + MI + + P V+ +D
Sbjct: 179 VKGCTVGVVDERSELGGCYLGIAQNDIGM--RTDILDCCPKAEGMILLIRSMAPRVLAID 236
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
EIG E E A G LI + HG LE I + P + +LI
Sbjct: 237 EIGGEEEIRALEYAMHCGCKLIASVHGSDLEEISERPGVKELI 279
>gi|443631736|ref|ZP_21115916.1| stage III sporulation protein AA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347851|gb|ELS61908.1| stage III sporulation protein AA [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 305
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 77/160 (48%), Gaps = 9/160 (5%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSD----EF 150
I R+ R G + + L+ + L +G P GKTT++R++AR+ S
Sbjct: 109 ITSFNIRIARQKLGIAEPLLPYLYQDSWLNTLIIGPPQTGKTTLLRDLARLSSTGKNLML 168
Query: 151 QKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
+ IVD +EI G IP G +R+ V + + + ++ + + PEVIIVDEI
Sbjct: 169 PVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVIIVDEI 226
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
G + A GV +I +AHG + +++K P L L
Sbjct: 227 GRVEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|452975004|gb|EME74823.1| stage III sporulation protein AA [Bacillus sonorensis L12]
Length = 307
Score = 58.5 bits (140), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 66/131 (50%), Gaps = 7/131 (5%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEF----QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ L +G P GKTT++R++ R++S K+ IVD +EI G IP G
Sbjct: 138 NTLIIGPPQTGKTTLLRDLGRLISTGSGKIPAKKAAIVDERSEIAGCVNGIPQYKFGN-- 195
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ + + + + ++ + + PEV+I DEIG +A A GV +I +AHG
Sbjct: 196 RIDILDACPKAEGLMMMIRSMSPEVVIADEIGRMEDAEALLEAVHAGVSVIVSAHGFTYS 255
Query: 239 NIIKNPILSDL 249
++ K P L L
Sbjct: 256 DVSKRPSLKLL 266
>gi|430759091|ref|YP_007209015.1| Stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. BSP1]
gi|430023611|gb|AGA24217.1| Stage III sporulation protein AA [Bacillus subtilis subsp. subtilis
str. BSP1]
Length = 307
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 80/161 (49%), Gaps = 11/161 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
I R+ R G + + L+ + L +G P GKTT++R++AR LS +K +
Sbjct: 109 IASFNIRIARQKLGIAEPLLPYLYQDSWLNTLIIGPPQTGKTTLLRDLAR-LSSTGKKPM 167
Query: 155 V-----IVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ IVD +EI G IP G +R+ V + + + ++ + + PEV+IVDE
Sbjct: 168 LPVKTGIVDERSEIAGCLRGIPQHQFG--QRIDVLDACPKAEGLMMMIRSMSPEVMIVDE 225
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
IG + A GV +I +AHG + +++K P L L
Sbjct: 226 IGRMEDTDALLEALHAGVSVIVSAHGWSISDLMKRPSLKRL 266
>gi|421860480|ref|ZP_16292604.1| uncharacterized protein conserved in bacteria [Paenibacillus
popilliae ATCC 14706]
gi|410829962|dbj|GAC43041.1| uncharacterized protein conserved in bacteria [Paenibacillus
popilliae ATCC 14706]
Length = 320
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 55/196 (28%), Positives = 89/196 (45%), Gaps = 25/196 (12%)
Query: 74 GDNRAGIEG----TLHRISAIRSRKGAIVGLTCRVGRAVSG----HIDMVYDLLH-YGKS 124
G +R G+ G R+S +R I G R+ R V G + M+ D H +
Sbjct: 88 GGHRIGLAGRTVLAQGRVSHLRE----ITGFNLRIAREVHGIAASVMPMLLDFKHAHIHH 143
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQK---------RVVIVDTSNEIGGD-GDIPHSAI 174
L V P GKTT++R++ R + +V +VD +EI G +P +
Sbjct: 144 TLIVSPPQQGKTTLLRDLVRAIGSGLWHHPEARWKALKVGVVDERSEIAGCIKGVPSYDL 203
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
G R V + + + M+ + + P+V+ VDE G E + A GV LI TAH
Sbjct: 204 GY--RTDVLDGCPKAEGMMMFIRSMSPDVLAVDETGREEDLLAMSEAMHAGVRLIATAHA 261
Query: 235 EWLENIIKNPILSDLI 250
E ++++++ P L L+
Sbjct: 262 EDMDDLLRRPGLRQLL 277
>gi|375309142|ref|ZP_09774423.1| stage III sporulation protein AA [Paenibacillus sp. Aloe-11]
gi|375078451|gb|EHS56678.1| stage III sporulation protein AA [Paenibacillus sp. Aloe-11]
Length = 331
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIARVLS---- 147
I R+ RA+ G D + + KS L + P GKTT++R++AR LS
Sbjct: 120 ISSFNVRIARAIPGIADRILPYVADQKSGKIRHTLILSPPQHGKTTLLRDLARQLSYGGV 179
Query: 148 -----DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
+V I+D +EI G IP +G R V + + + M+ + + P
Sbjct: 180 GSNGGRRSGLKVGIIDERSEIAGSHKGIPGFDVGP--RTDVLDGCPKAEGMMMMIRSMSP 237
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 258
+V+IVDEIG +A A R G+ +I +AHG + + L+ L G + L
Sbjct: 238 DVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMATRSALAGLTAGQELFQL 294
>gi|302392502|ref|YP_003828322.1| stage III sporulation protein AA [Acetohalobium arabaticum DSM
5501]
gi|302204579|gb|ADL13257.1| stage III sporulation protein AA [Acetohalobium arabaticum DSM
5501]
Length = 330
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 86/206 (41%), Gaps = 23/206 (11%)
Query: 63 EYAQSAVGEFGGDNRAGIEGT----LHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVY-- 116
E Q G +R G G L I I++ GL R+ + + G D V
Sbjct: 92 EELQQGYLTLAGGHRVGFVGQVVSDLDEIELIKN----FSGLNIRISQEIIGAADEVIGE 147
Query: 117 ----DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD 166
D + L + P GKTT++R++ R LS + +V +VD E+GG
Sbjct: 148 VISNDQSQSIYNTLIISPPQCGKTTLLRDLIRQLSTGLPEQNFSGLKVGVVDERGELGGS 207
Query: 167 GD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERG 225
+ + +G + P Q MI + PEVI+ DEIG+ + A G
Sbjct: 208 YQGVVQNQLGIRTDLLANCPKSQG--MILLIRAMSPEVIVTDEIGSRQDVQAICEAVNAG 265
Query: 226 VMLIGTAHGEWLENIIKNPILSDLIG 251
V ++ + HG L+ I + P L L+G
Sbjct: 266 VKIVTSVHGRDLKEIKQRPNLEKLLG 291
>gi|291545427|emb|CBL18535.1| stage III sporulation protein AA [Ruminococcus sp. SR1/5]
Length = 310
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 86/188 (45%), Gaps = 18/188 (9%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---L 126
G +R G+ G + +RI ++ I + R+ + G + V + + I L
Sbjct: 93 GGHRVGVTGKVILDGNRIRGMKY----ISCINVRLAHEIQGCAEEVLPYIQTREQIMHTL 148
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGD-IPHSAIGTARRMQ 181
V P GKTT++R+I R +S+ + V +VD +E+ G IP + +G R
Sbjct: 149 IVSPPRCGKTTLLRDIIRQMSNGWGNISGVTVGVVDERSELAGCYQGIPQNDLGM--RTD 206
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
+ + + + M + + P V+ VDE+G E + A S+ G LI TAHG +E +
Sbjct: 207 ILDGCPKAEGMQMLIRSMSPVVVAVDELGKEEDFKAVESVIHCGCRLIATAHGASMEETL 266
Query: 242 KNPILSDL 249
P L
Sbjct: 267 SQPFFRKL 274
>gi|334341607|ref|YP_004546587.1| stage III sporulation protein AA [Desulfotomaculum ruminis DSM
2154]
gi|334092961|gb|AEG61301.1| stage III sporulation protein AA [Desulfotomaculum ruminis DSM
2154]
Length = 337
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 58/192 (30%), Positives = 86/192 (44%), Gaps = 21/192 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMV--YDLLHYGK--SI 125
G +R GI G + R+ I+ I G R+ RAV G D V Y + GK
Sbjct: 115 GGHRVGITGKVLTEQGRVKNIKY----ISGFNFRISRAVPGVADRVLPYLIAPDGKFYHT 170
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ V P GKTT++R++ R LS+ + V +VD +EI G +P +G
Sbjct: 171 MLVSPPRCGKTTLLRDLIRRLSEGVPELAFPGVNVGVVDERSEIAGCYRGVPQRDVGP-- 228
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + M+ + + P VI DEIG + + A + GV ++ T HG LE
Sbjct: 229 RTDVLDACPKAAGMMMLLRSMGPVVIATDEIGRQEDVAALEEVLNAGVKVLTTVHGSSLE 288
Query: 239 NIIKNPILSDLI 250
+ P L L
Sbjct: 289 ELADRPALQYLF 300
>gi|218132216|ref|ZP_03461020.1| hypothetical protein BACPEC_00073 [[Bacteroides] pectinophilus ATCC
43243]
gi|217992875|gb|EEC58875.1| stage III sporulation protein AA [[Bacteroides] pectinophilus ATCC
43243]
Length = 299
Score = 58.2 bits (139), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 76/157 (48%), Gaps = 10/157 (6%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSD---EFQKRVV- 155
RV + G VY +H I L + PG GKTT++R++ R +S+ ++ + V
Sbjct: 120 RVAHQIRGCAASVYGFIHNSTQIENTLIISPPGCGKTTMLRDLIRQISNGNSYYEGQTVG 179
Query: 156 IVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAE 214
+VD +EI + P + +G R V + + + M+ V + P VI VDEI T +
Sbjct: 180 VVDERSEIAACYNGRPQNDLGI--RTDVLDCCPKAEGMVMLVRSMSPRVIAVDEIATPDD 237
Query: 215 AHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIG 251
A R + G +I TAH + + + P ++L+
Sbjct: 238 IEAVRYVMNCGCSIIATAHAYNADELRQKPQFAELLA 274
>gi|310642679|ref|YP_003947437.1| stage III sporulation protein aa [Paenibacillus polymyxa SC2]
gi|386041735|ref|YP_005960689.1| stage III sporulation protein AA [Paenibacillus polymyxa M1]
gi|309247629|gb|ADO57196.1| Stage III sporulation protein AA [Paenibacillus polymyxa SC2]
gi|343097773|emb|CCC85982.1| stage III sporulation protein AA [Paenibacillus polymyxa M1]
Length = 331
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 80/177 (45%), Gaps = 17/177 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIARVLSDEFQ 151
I R+ RA+ G D + + KS L + P GKTT++R++AR LS
Sbjct: 120 ISSFNVRIARAIPGIADRILPYVADRKSGMIRHTLILSPPQHGKTTLLRDLARQLSYGGM 179
Query: 152 K---------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
K +V I+D +EI G IP +G R + + + + M+ + + P
Sbjct: 180 KSNGGRRNGLKVGIIDERSEIAGSHKGIPGFDVGP--RTDILDGCPKAEGMMMMIRSMSP 237
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 258
+V+IVDEIG +A A R G+ +I +AHG + + + L G + L
Sbjct: 238 DVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMASRSAFAGLATGQELFQL 294
>gi|159488481|ref|XP_001702238.1| hypothetical protein CHLREDRAFT_154234 [Chlamydomonas reinhardtii]
gi|158271275|gb|EDO97098.1| predicted protein [Chlamydomonas reinhardtii]
Length = 205
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 43/71 (60%), Gaps = 1/71 (1%)
Query: 214 EAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL-GDEEARARRCQKSI 272
EA A RSI++RGVML+ TAHG L +I+ NP L+ L+GG+ TV L A K+
Sbjct: 2 EAEAARSISQRGVMLVATAHGTDLRSIMGNPDLNSLVGGMQTVILGDAAAGAAHGGAKTR 61
Query: 273 LERKAPPTFYF 283
ER+ PTF
Sbjct: 62 TERRGEPTFRL 72
>gi|308069614|ref|YP_003871219.1| stage III sporulation protein AA [Paenibacillus polymyxa E681]
gi|305858893|gb|ADM70681.1| Stage III sporulation protein AA [Paenibacillus polymyxa E681]
Length = 331
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 81/177 (45%), Gaps = 17/177 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLH---YGK--SILFVGRPGVGKTTVMREIARVLSDEFQ 151
I R+ RA+ G D + + GK L + P GKTT++R++AR LS
Sbjct: 120 ISSFNVRIARAIPGIADRILPYVADRMSGKIRHTLILSPPQHGKTTLLRDLARQLSYGGM 179
Query: 152 K---------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
+ +V I+D +EI G IP +G R V + + + M+ + + P
Sbjct: 180 ESNGGRRNGLKVGIIDERSEIAGSHKGIPGFDVGP--RTDVLDGCPKAEGMMMMIRSMSP 237
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGGVDTVTL 258
+V+IVDEIG +A A R G+ +I +AHG + + P + L G + L
Sbjct: 238 DVLIVDEIGRPEDAEAVREALHAGIAVIASAHGRDVAEMATRPAFAGLTTGQELFQL 294
>gi|345019757|ref|ZP_08783370.1| stage III sporulation protein AA [Ornithinibacillus scapharcae
TW25]
Length = 328
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/184 (29%), Positives = 93/184 (50%), Gaps = 9/184 (4%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFVGRP 131
G +R G+ G ++ + I L R+ + G V L+ K + L VG P
Sbjct: 87 GGHRVGLAGKVNTFNGSVKAIQYITFLNIRIAKEKIGVGMEVIPYLYDNKFLNTLIVGSP 146
Query: 132 GVGKTTVMREIARVLSDEFQ----KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPS 186
GKTT++R+I R++S ++ K+V +VD +EI IP +G RR V +
Sbjct: 147 QSGKTTLIRDIIRIISSGWKTIPPKKVGVVDERSEIAACLKGIPQHNLG--RRTDVLDAC 204
Query: 187 LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
+ + M+ + + PE+++VDEIG++ + A + GV +I T HG+ L+ + K P +
Sbjct: 205 PKAEGMMMMIRSMSPEILVVDEIGSDKDVQALMNAINAGVTVICTIHGQTLDELKKRPSI 264
Query: 247 SDLI 250
L+
Sbjct: 265 IPLL 268
>gi|251796305|ref|YP_003011036.1| stage III sporulation protein AA [Paenibacillus sp. JDR-2]
gi|247543931|gb|ACT00950.1| stage III sporulation protein AA [Paenibacillus sp. JDR-2]
Length = 350
Score = 57.8 bits (138), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 82/171 (47%), Gaps = 19/171 (11%)
Query: 97 IVGLTCRVGRAVSGHI-DMVYDLLHYGK----SILFVGRPGVGKTTVMREIARVLS---- 147
I G R+ R V G +++ LL + S L + P GKTT++R+IAR +S
Sbjct: 122 IGGFNIRIAREVVGSARNLLPKLLDKNRKTVHSTLILAPPQQGKTTIVRDIARSISYGHW 181
Query: 148 DEFQ-------KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENH 199
F+ ++V IVD +EI IP +G R + + + + M+ + +
Sbjct: 182 GLFENAAGWAGRKVGIVDERSEIAACVRGIPTFDVGP--RTDIMDACPKAEGMMMLLRSM 239
Query: 200 MPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
PEV+I DEIG + A R + G+ +I TAH L++ P+L L+
Sbjct: 240 SPEVVIADEIGRPEDGEAIREASHAGISVIATAHAYDLQDAKGRPVLQQLL 290
>gi|325265391|ref|ZP_08132115.1| stage III sporulation protein AA [Clostridium sp. D5]
gi|324029392|gb|EGB90683.1| stage III sporulation protein AA [Clostridium sp. D5]
Length = 314
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 78/166 (46%), Gaps = 18/166 (10%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSD--EFQ 151
I + R+ + G D V + + + L + P GKTT++R++ R +SD +
Sbjct: 120 ISSVNIRMSHEILGCADKVMPYITKNRQVCHTLVISPPCCGKTTLIRDLIRQISDGNMYV 179
Query: 152 K--RVVIVDTSNEIGGDGDIPHSAIGTAR-----RMQVPEPSLQHKVMIEAVENHMPEVI 204
K V +VD +EIGG +G A+ R V + + + MI + + P+VI
Sbjct: 180 KGCTVGVVDERSEIGG------CYLGVAQNELGMRTDVLDCCPKAEGMIMLIRSMAPQVI 233
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VDEIG+ + HA + G +I + HG ++ P+L LI
Sbjct: 234 AVDEIGSPEDVHAIEYAMQCGCKMIASVHGLSMDEAADKPVLGKLI 279
>gi|354582540|ref|ZP_09001441.1| stage III sporulation protein AA [Paenibacillus lactis 154]
gi|353198832|gb|EHB64298.1| stage III sporulation protein AA [Paenibacillus lactis 154]
Length = 332
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/169 (30%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 97 IVGLTCRVGRAVSGHID-MVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLS---- 147
I G R+ + + G D M+ LL + L + P GKTT++R++AR +S
Sbjct: 122 ISGFNVRIAKEIRGAADEMLPHLLDRKRKRVMHTLILSPPQHGKTTLLRDLARQISYGQW 181
Query: 148 -----DEFQKRVVIVDTSNEIGG-DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
+V IVD +EI G +P +G R V + + + M+ + + P
Sbjct: 182 GAGTVRWPGMKVGIVDERSEIAGCQRGVPGFDVGP--RTDVLDGCPKAEGMMMMIRSMSP 239
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+V+IVDEIG +A A G+ +I TAHG ++++ P LS LI
Sbjct: 240 DVLIVDEIGRAEDAEAVVEALHAGISVIATAHGSSVQDMRGRPALSGLI 288
>gi|332652603|ref|ZP_08418348.1| stage III sporulation protein AA [Ruminococcaceae bacterium D16]
gi|332517749|gb|EGJ47352.1| stage III sporulation protein AA [Ruminococcaceae bacterium D16]
Length = 303
Score = 57.4 bits (137), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/172 (29%), Positives = 79/172 (45%), Gaps = 16/172 (9%)
Query: 93 RKGAIVGL------TCRVGRAVSGHIDMVYDLL--HYGK--SILFVGRPGVGKTTVMREI 142
R G I GL RV R V+G V L G S L + PG GKTT++R++
Sbjct: 108 RDGQIHGLGRLSSAAIRVARQVTGAAAPVAQKLLEQSGALCSTLILAPPGAGKTTLLRDL 167
Query: 143 ARVLS---DEFQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVEN 198
R++S +RV + D E+ +P +G R V E + + ++ +
Sbjct: 168 IRMVSHGEGMTPQRVAVADERGEVAALWNGVPQLDVG--ERTDVLEGCPKAQALMMLLRA 225
Query: 199 HMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
P+V+ DEI + A S A GV L+ TAHG E++ + P+ +L+
Sbjct: 226 MNPQVLAADEITAPEDVAALISAAGCGVKLLATAHGSAREDLARRPLYRELM 277
>gi|390935036|ref|YP_006392541.1| stage III sporulation protein AA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
gi|389570537|gb|AFK86942.1| stage III sporulation protein AA [Thermoanaerobacterium
saccharolyticum JW/SL-YS485]
Length = 334
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 82/168 (48%), Gaps = 15/168 (8%)
Query: 97 IVGLTCRVGRAVSGHID--MVYDLLHYG---KSILFVGRPGVGKTTVMREIARVLSD--- 148
I G R+ R G D M Y ++ Y + L + P GKTT++R+IAR +S+
Sbjct: 128 ISGFNYRIMRQCIGSSDEIMRY-IVKYPDVVNNTLIISPPQCGKTTLIRDIARNISNGMP 186
Query: 149 --EFQ-KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 204
FQ ++V IVD +EI IP + +G R V + +H ++ + + P+VI
Sbjct: 187 ELNFQGEKVSIVDERSEIAACFKGIPQNDVGY--RTDVLDLCPKHIGILMMIRSMSPKVI 244
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGG 252
I DEIG + + GV +I T HG +E++ + + +++
Sbjct: 245 ITDEIGKVEDISSIHEALNAGVSIITTVHGNGIEDVARKKYIDEMLNN 292
>gi|302389879|ref|YP_003825700.1| stage III sporulation protein AA [Thermosediminibacter oceani DSM
16646]
gi|302200507|gb|ADL08077.1| stage III sporulation protein AA [Thermosediminibacter oceani DSM
16646]
Length = 341
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/190 (28%), Positives = 89/190 (46%), Gaps = 15/190 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHID----MVYDLLHYGKSILFV 128
G +R GI G + I++ K I G R+ R V G D V D + + +
Sbjct: 111 GGHRVGIVGKVILEGGQIKTMK-HISGFNIRIAREVLGAADEALRFVIDEKGEFLNTMIL 169
Query: 129 GRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTARRMQ 181
P GKTT++R++ R LS + +V +VD +EI + +P + +G R
Sbjct: 170 SPPKAGKTTLLRDLIRQLSSGNPRLGLKGFKVGVVDERSEIACCYEGVPQNDVGI--RTD 227
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + + ++ + + P++I DEIG + A GV L+ TAHG LE++
Sbjct: 228 VLDGCPKARGIMMLLRSMSPDIIATDEIGRTEDVEAMEEALNAGVKLLTTAHGADLEDVG 287
Query: 242 KNPILSDLIG 251
+ P L LIG
Sbjct: 288 RRPTLRKLIG 297
>gi|452992565|emb|CCQ95992.1| Stage III sporulation protein AA [Clostridium ultunense Esp]
Length = 324
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/192 (28%), Positives = 87/192 (45%), Gaps = 21/192 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSG----HIDMVYDLLHYGKSI 125
G +R GI G + + I IR I L R+ R G I + D H
Sbjct: 106 GGHRVGIGGKVLYGPNGIETIRD----ISSLNMRIAREKIGVSEKLIKYIIDFSHTIYDT 161
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTAR 178
L V P GKTT++R++ R+LS+ + +V ++D +E+ G + +P IG
Sbjct: 162 LIVSPPQCGKTTILRDLIRILSNGSKDLGGKGMKVGVIDERSELAGMYNGMPQFDIGL-- 219
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + I + P+++ +DEIG+ + A + GV +I T HG LE
Sbjct: 220 RTDVLDGCNKKDGTIMLIRAMSPDIVAMDEIGSINDVDAIHEALKAGVKIIATIHGSTLE 279
Query: 239 NIIKNPILSDLI 250
+++ L LI
Sbjct: 280 DLVSKKSLRMLI 291
>gi|28211253|ref|NP_782197.1| stage III sporulation protein AA [Clostridium tetani E88]
gi|28203693|gb|AAO36134.1| stage III sporulation protein AA [Clostridium tetani E88]
Length = 303
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 75/152 (49%), Gaps = 12/152 (7%)
Query: 99 GLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQK--- 152
L R+ R V+G D + + + + + P GKTT++R+IA+ LS+ K
Sbjct: 111 SLNIRICREVAGCSDKILPYILKSSMVENTIIISPPNCGKTTLLRDIAKKLSNGISKLDL 170
Query: 153 ---RVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+V ++D +EI + +P +G R V + + + ++ A+ + P+VI+ DE
Sbjct: 171 KGMKVCVIDERSEIASCVNGVPQLNLGL--RTDVLDSCPKSQGIMMAIRSMSPDVIVCDE 228
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
IG+ + + GV LI T HG +++I
Sbjct: 229 IGSTEDIESIIKAMNSGVKLITTVHGYDVKDI 260
>gi|315646315|ref|ZP_07899435.1| stage III sporulation protein AA [Paenibacillus vortex V453]
gi|315278514|gb|EFU41830.1| stage III sporulation protein AA [Paenibacillus vortex V453]
Length = 332
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/196 (29%), Positives = 94/196 (47%), Gaps = 25/196 (12%)
Query: 74 GDNRAGIEG----TLHRISAIRSRKGAIVGLTCRVGRAVSGHID-MVYDLLHYGKS---- 124
G +R G+ G + R+ IR I G R+ + V G D ++ LL +
Sbjct: 99 GGHRVGLTGRTVLSGGRVEHIRD----ISGFNVRIAKEVQGAADDIIPHLLDRKRKRVLH 154
Query: 125 ILFVGRPGVGKTTVMREIARVLSD-EFQKRVV--------IVDTSNEIGGD-GDIPHSAI 174
L + P GKTT++R++AR +S ++ K V IVD +EI G +P +
Sbjct: 155 TLILSPPQQGKTTLLRDLARQISHGKWGKSAVHWPGMKVGIVDERSEIAGCLRGVPGFDV 214
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
G R V + + + M+ + + P+V+IVDEIG +A A G+ +I TAHG
Sbjct: 215 GP--RTDVLDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATAHG 272
Query: 235 EWLENIIKNPILSDLI 250
++++ P LS L+
Sbjct: 273 SSVQDMRGRPALSGLL 288
>gi|398304497|ref|ZP_10508083.1| stage III sporulation protein AA [Bacillus vallismortis DV1-F-3]
Length = 307
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 68/131 (51%), Gaps = 7/131 (5%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSD----EFQKRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ L +G P GKTT++R++AR+ S + IVD +EI G IP G +
Sbjct: 138 NTLIIGPPQTGKTTLLRDLARLSSTGKNGMSPAKTGIVDERSEIAGCLRGIPQHQFG--Q 195
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + ++ + + PEVIIVDEIG + A GV +I +AHG +
Sbjct: 196 RIDVLDACPKAEGLMMMIRSMSPEVIIVDEIGRIEDTDALLEALHAGVSVIVSAHGWSIS 255
Query: 239 NIIKNPILSDL 249
+++K P L L
Sbjct: 256 DLMKRPSLKRL 266
>gi|414154684|ref|ZP_11411001.1| Stage III sporulation protein AA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
gi|411453515|emb|CCO08905.1| Stage III sporulation protein AA [Desulfotomaculum hydrothermale
Lam5 = DSM 18033]
Length = 337
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMV--YDLLHYGK--SILFVG 129
G +R GI G + + I G R+ RA+ G D V Y + GK + V
Sbjct: 115 GGHRVGITGKVLTDQGVVRHIKYISGFNLRISRAIKGVADRVLPYLISPTGKFYHTVLVS 174
Query: 130 RPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQV 182
P GKTT++R++ R LS+ + V +VD +EI G IP +G R V
Sbjct: 175 PPRCGKTTLLRDLVRRLSEGIPELGWPGSNVGVVDERSEIAGCYRGIPQQDVGP--RTDV 232
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + M+ + + P VI DEIG + A + GV ++ T HG L +
Sbjct: 233 LDACPKAAGMMMLLRSMGPAVIATDEIGRREDVAALEEVLHAGVKVLTTVHGGSLAELAD 292
Query: 243 NPILSDLI 250
P L L
Sbjct: 293 RPALQYLF 300
>gi|333924296|ref|YP_004497876.1| stage III sporulation protein AA [Desulfotomaculum carboxydivorans
CO-1-SRB]
gi|333749857|gb|AEF94964.1| stage III sporulation protein AA [Desulfotomaculum carboxydivorans
CO-1-SRB]
Length = 323
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS----I 125
G +R GI G + R+ I+ I G R+ RA+ G D V L +
Sbjct: 101 GGHRVGITGKVLTEQGRVKNIKY----IAGFNFRISRALVGVADKVLPYLISPEGRFYHT 156
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ V P GKTT++R++ R LS+ + V +VD +EI G +P IG
Sbjct: 157 MLVSPPRCGKTTLLRDLVRRLSEGVPELGLPGMTVGVVDERSEIAGCYRGVPQRDIGP-- 214
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + M+ + + P+VI DEIG + A + GV ++ T HG LE
Sbjct: 215 RTDVLDACPKAAGMMMLLRSMGPQVIATDEIGRPEDIAALEEMVNAGVKVLTTVHGASLE 274
Query: 239 NIIKNPILSDL 249
+ P L L
Sbjct: 275 ELTDRPALQYL 285
>gi|295093404|emb|CBK82495.1| stage III sporulation protein AA [Coprococcus sp. ART55/1]
Length = 310
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 89/191 (46%), Gaps = 22/191 (11%)
Query: 61 ELEYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVY 116
E E Q + GG +R G+ G + RI IR I L RV + G
Sbjct: 87 EDEIRQGFITVCGG-HRVGVAGKIILDGTRIKCIRH----ISFLNIRVAHEIKG---CSG 138
Query: 117 DLLHY----GK--SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGD-GDI 169
D+L Y GK + L V P GKTT++R+I RV+SD V +VD +EI +
Sbjct: 139 DVLPYIYSDGKLMNTLIVSAPCHGKTTLLRDIIRVVSDGGMT-VGVVDERSEIAACYKGV 197
Query: 170 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
P + +G R V + + M+ V P++I VDEIG + + A + G L+
Sbjct: 198 PQNDVGM--RTDVLDCCPKASGMMMLVRTMAPDLIAVDEIGGQQDVDAIFGVINCGCRLL 255
Query: 230 GTAHGEWLENI 240
TAHG ++++
Sbjct: 256 ATAHGYSMDDV 266
>gi|336234728|ref|YP_004587344.1| stage III sporulation protein AA [Geobacillus thermoglucosidasius
C56-YS93]
gi|335361583|gb|AEH47263.1| stage III sporulation protein AA [Geobacillus thermoglucosidasius
C56-YS93]
Length = 308
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ +G P GKTT++R+ AR++S ++V IVD +EI G IP +G
Sbjct: 140 MIIGSPQTGKTTLLRDAARMISTGILARHIPSQKVGIVDERSEIAGCVKGIPQFQLGN-- 197
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + M+ + + P+V+IVDEIG + A GV + T HG +
Sbjct: 198 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRSEDGEAILEAVNAGVCIWTTVHGRNRK 257
Query: 239 NIIKNPILSDLI 250
++++ P L ++
Sbjct: 258 DVLQRPTLRPIM 269
>gi|433654894|ref|YP_007298602.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum M0795]
gi|433293083|gb|AGB18905.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum M0795]
Length = 333
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 126 LFVGRPGVGKTTVMREIARVLSD-----EFQ-KRVVIVDTSNEIGG--DGDIPHSAIGTA 177
L + P GKTT++R+IAR +S+ +F + V I+D +EI G+ P + +G
Sbjct: 161 LIISPPQCGKTTLLRDIARNISNGMADLDFNGENVSIIDERSEIAACFKGN-PQNDVGY- 218
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
R V + +H ++ + + P+VII DEIG + A GV +I T HG+ +
Sbjct: 219 -RTDVLDSCPKHIGILMMIRSMSPKVIITDEIGKIEDILAIHEALNAGVSIITTVHGKDI 277
Query: 238 ENIIKNPILSDLIGG 252
E+I++ + D++
Sbjct: 278 EDIMRKKHIDDMLNN 292
>gi|304316750|ref|YP_003851895.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302778252|gb|ADL68811.1| stage III sporulation protein AA [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 333
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 71/135 (52%), Gaps = 11/135 (8%)
Query: 126 LFVGRPGVGKTTVMREIARVLSD-----EFQ-KRVVIVDTSNEIGG--DGDIPHSAIGTA 177
L + P GKTT++R+IAR +S+ +F + V I+D +EI G+ P + +G
Sbjct: 161 LIISPPQCGKTTLLRDIARNISNGMADLDFNGENVSIIDERSEIAACFKGN-PQNDVGY- 218
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
R V + +H ++ + + P+VII DEIG + A GV +I T HG+ +
Sbjct: 219 -RTDVLDSCPKHIGILMMIRSMSPKVIITDEIGKIEDILAIHEALNAGVSIITTVHGKDI 277
Query: 238 ENIIKNPILSDLIGG 252
E+I++ + D++
Sbjct: 278 EDIMRKKHIDDMLNN 292
>gi|312110267|ref|YP_003988583.1| stage III sporulation protein AA [Geobacillus sp. Y4.1MC1]
gi|423719293|ref|ZP_17693475.1| stage III sporulation protein AA [Geobacillus thermoglucosidans
TNO-09.020]
gi|311215368|gb|ADP73972.1| stage III sporulation protein AA [Geobacillus sp. Y4.1MC1]
gi|383368196|gb|EID45471.1| stage III sporulation protein AA [Geobacillus thermoglucosidans
TNO-09.020]
Length = 308
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 68/132 (51%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEF------QKRVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ +G P GKTT++R+ AR++S ++V IVD +EI G IP +G
Sbjct: 140 MIIGSPQTGKTTLLRDAARMISTGILARHIPSQKVGIVDERSEIAGCVKGIPQFQLGN-- 197
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R+ V + + + M+ + + P+V+IVDEIG + A GV + T HG +
Sbjct: 198 RVDVLDACPKAEGMMMMIRSMSPDVLIVDEIGRSEDGAAILEAVNAGVCIWTTVHGRNRK 257
Query: 239 NIIKNPILSDLI 250
++++ P L ++
Sbjct: 258 DVLQRPTLRPIM 269
>gi|291562681|emb|CBL41497.1| stage III sporulation protein AA [butyrate-producing bacterium
SS3/4]
Length = 323
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 73/158 (46%), Gaps = 10/158 (6%)
Query: 100 LTCRVGRAVSGHIDMVYDLLHYGKSIL---FVGRPGVGKTTVMREIARVLSDEFQ----K 152
L RV V G V L G++ L + PG GKTT++R++ R LS K
Sbjct: 132 LNIRVAHEVKGCAKNVLPYLMDGETFLDTLLISPPGAGKTTLLRDLIRELSCGGTWGAGK 191
Query: 153 RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 211
V +VD +EI G I +G R V + + + M+ + + P+V+ VDE G
Sbjct: 192 NVSVVDERSEIAACFGGIAQCDLGP--RTDVMDGCPKSEGMLMMLRSMAPQVLAVDEAGG 249
Query: 212 EAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
E E A + G ++ T HG + +I+K P +L
Sbjct: 250 EGEILAMKYGMNCGCRILATVHGADVGDIMKRPAWREL 287
>gi|311030965|ref|ZP_07709055.1| stage III sporulation protein AA [Bacillus sp. m3-13]
Length = 310
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 71/134 (52%), Gaps = 9/134 (6%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVV------IVDTSNEIGGD-GDIPHSAIGT 176
S + +G P GKTT++R++AR++S +++ V IVD +EI G IP +G
Sbjct: 140 STMVIGPPQTGKTTLLRDLARIMSSGCEEKRVASCKVGIVDERSEIAGCVHGIPQHDLG- 198
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
+R+ V + + + M+ + + P+VI+VDEIG ++ A GV L+ + H
Sbjct: 199 -QRVDVLDSCPKAEGMMMMIRSMSPDVIVVDEIGRMEDSEAVMEAVNAGVGLLMSVHAFS 257
Query: 237 LENIIKNPILSDLI 250
+ + P L +++
Sbjct: 258 FDELKSRPSLREIL 271
>gi|323702758|ref|ZP_08114418.1| stage III sporulation protein AA [Desulfotomaculum nigrificans DSM
574]
gi|323532275|gb|EGB22154.1| stage III sporulation protein AA [Desulfotomaculum nigrificans DSM
574]
Length = 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 84/191 (43%), Gaps = 21/191 (10%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS----I 125
G +R GI G + R+ I+ I G R+ RA+ G D V L +
Sbjct: 101 GGHRVGITGKVLTEQGRVKNIKY----ISGFNFRISRALVGVADKVLPYLISPEGRFYHT 156
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTAR 178
+ V P GKTT++R++ R LS+ + V +VD +EI G +P IG
Sbjct: 157 MLVSPPRCGKTTLLRDLVRRLSEGVPELGLPGMTVGVVDERSEIAGCYRGVPQRDIGP-- 214
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + M+ + + P+VI DEIG + A + GV ++ T HG LE
Sbjct: 215 RTDVLDACPKAAGMMMLLRSMGPQVIATDEIGRPEDIAALEEMVNAGVKVLTTVHGASLE 274
Query: 239 NIIKNPILSDL 249
+ P L L
Sbjct: 275 ELTDRPALQYL 285
>gi|376261518|ref|YP_005148238.1| stage III sporulation protein AA [Clostridium sp. BNL1100]
gi|373945512|gb|AEY66433.1| stage III sporulation protein AA [Clostridium sp. BNL1100]
Length = 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 69/147 (46%), Gaps = 13/147 (8%)
Query: 99 GLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLS------D 148
GL R+ + V G + + S L VG P GKTT++R+++R+LS D
Sbjct: 127 GLNIRIAKEVKGSAKHIIKYIIKNSSDIYNTLIVGPPQCGKTTILRDLSRMLSSGEAEYD 186
Query: 149 EFQKRVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
+V IVD +EI +P S +G + P + M+ + + P +II D
Sbjct: 187 FNGMKVGIVDERSEIAACCKGVPQSDVGYRTDVLDGCPKVLGMEML--LRSMSPGIIITD 244
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHG 234
EIGT + A + G+ +I +AHG
Sbjct: 245 EIGTHGDRDAILKVLNSGIKIIASAHG 271
>gi|326201942|ref|ZP_08191812.1| stage III sporulation protein AA [Clostridium papyrosolvens DSM
2782]
gi|325987737|gb|EGD48563.1| stage III sporulation protein AA [Clostridium papyrosolvens DSM
2782]
Length = 323
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 13/147 (8%)
Query: 99 GLTCRVGRAVSGHIDMVYDLLHYGKS----ILFVGRPGVGKTTVMREIARVLSDEFQK-- 152
GL R+ + V G + + S L VG P GKTT++R+++R+LS Q+
Sbjct: 127 GLNIRIAKEVRGCAKNIIKYIIKNSSDIYNTLIVGPPQCGKTTILRDLSRMLSSGEQEYD 186
Query: 153 ----RVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
+V IVD +EI +P + +G + P + M+ + + P +II D
Sbjct: 187 FNGMKVGIVDERSEIAACCKGVPQNDVGYRTDVMDGCPKVLGMEML--LRSMSPGIIITD 244
Query: 208 EIGTEAEAHACRSIAERGVMLIGTAHG 234
EIGT + A + G+ +I +AHG
Sbjct: 245 EIGTHGDRDAVLKVLNSGIKIIASAHG 271
>gi|291525262|emb|CBK90849.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
DSM 17629]
gi|291529279|emb|CBK94865.1| Uncharacterized protein conserved in bacteria [Eubacterium rectale
M104/1]
Length = 313
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 90/189 (47%), Gaps = 20/189 (10%)
Query: 66 QSAVGEFG--GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Q A G F G +R GI G + + I L R+ + D+ L+ Y +
Sbjct: 71 QLAAGYFTVEGGHRVGIAGQMGCDGGKVTAVSEIASLNIRIAHQIR---DVAMPLMPYIR 127
Query: 124 ------SILFVGRPGVGKTTVMREIARVLSD----EFQKRVVIVDTSNEIGGDG-DIPHS 172
+ L + RPG GKTT +R+ R+LSD + +V +VD +EI + +
Sbjct: 128 DENSIYNTLVISRPGEGKTTFLRDCIRILSDGCDGKNALKVSVVDERSEIAACYLGVAQN 187
Query: 173 AIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 231
IG + + P SL ++++ ++ P+VI VDE+G E++ A + G+ ++G+
Sbjct: 188 DIGNSSDVLDNCPKSLGMRMLLRSMS---PDVIAVDELGGESDIEALNQLVSCGIRILGS 244
Query: 232 AHGEWLENI 240
HG +++
Sbjct: 245 VHGTNADDL 253
>gi|296133231|ref|YP_003640478.1| stage III sporulation protein AA [Thermincola potens JR]
gi|296031809|gb|ADG82577.1| stage III sporulation protein AA [Thermincola potens JR]
Length = 325
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 14/166 (8%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLL-----HYGKSILFVGRPGVGKTTVMREIARVLSDEFQ 151
I L R+ R V G D + L + L + P GKTT++R+I R LS+
Sbjct: 128 ITSLNIRIAREVIGASDNIMPYLIDPIRKEFQHTLIISPPRCGKTTLLRDIVRQLSNGVP 187
Query: 152 K------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 204
V +VD +EI G +P +G R V + + + MI + + P+V+
Sbjct: 188 SLGFHGVPVGVVDERSEIAGCFRGVPQKDVGI--RTDVLDGCPKAEGMIMLIRSMAPKVV 245
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
DEIG + + A + G+ ++ T HG + +++ P L L+
Sbjct: 246 ATDEIGRKEDIFALEEVLNAGIKILTTVHGANMSELVQRPALKYLV 291
>gi|225375604|ref|ZP_03752825.1| hypothetical protein ROSEINA2194_01229 [Roseburia inulinivorans DSM
16841]
gi|225212583|gb|EEG94937.1| hypothetical protein ROSEINA2194_01229 [Roseburia inulinivorans DSM
16841]
Length = 309
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 83/181 (45%), Gaps = 10/181 (5%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGR 130
G +R G+ G + + I+ L R+ G + L+ SI L +
Sbjct: 94 GGHRVGVAGQTVLVDGKIAGISPIMFLNIRIAHEKCGCARKILPLIRQRDSIYNTLILSM 153
Query: 131 PGVGKTTVMREIARVLSDE----FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEP 185
PG GKTT++R+ R LS+ + +V +VD +EI +P + +G R V +
Sbjct: 154 PGAGKTTLLRDSIRALSNGEAYGIRLKVCVVDERSEIAASFHGVPQNDMGP--RTDVMDG 211
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPI 245
+ + M + + P++I VDE+G E++ +A G ++GT H ++ + + P
Sbjct: 212 CGKAEGMQLLIRSMSPQIIAVDELGAESDFYAVEQALNCGSRVLGTIHAGNMKELSEKPY 271
Query: 246 L 246
L
Sbjct: 272 L 272
>gi|238924594|ref|YP_002938110.1| stage III sporulation protein AA [Eubacterium rectale ATCC 33656]
gi|238876269|gb|ACR75976.1| stage III sporulation protein AA [Eubacterium rectale ATCC 33656]
Length = 313
Score = 55.5 bits (132), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 89/189 (47%), Gaps = 20/189 (10%)
Query: 66 QSAVGEFG--GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
Q A G F G +R GI G + + I L R+ + D+ L+ Y +
Sbjct: 71 QLAAGYFTVEGGHRVGIAGQMGCDGGKVTAVSEIASLNIRIAHQIR---DVAMPLMPYIR 127
Query: 124 ------SILFVGRPGVGKTTVMREIARVLSD----EFQKRVVIVDTSNEIGGDG-DIPHS 172
+ L + RPG GKTT +R+ R+LSD + +V +VD +EI + +
Sbjct: 128 DENSIYNTLVISRPGEGKTTFLRDCIRILSDGCDGKNALKVSVVDERSEIAACYLGVAQN 187
Query: 173 AIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 231
IG + + P SL ++++ ++ P+VI VDE+G E + A + G+ ++G+
Sbjct: 188 DIGNSSDVLDNCPKSLGMRMLLRSMS---PDVIAVDELGGEGDIEALNQLVSCGIRILGS 244
Query: 232 AHGEWLENI 240
HG +++
Sbjct: 245 VHGTNADDL 253
>gi|261405938|ref|YP_003242179.1| stage III sporulation protein AA [Paenibacillus sp. Y412MC10]
gi|261282401|gb|ACX64372.1| stage III sporulation protein AA [Paenibacillus sp. Y412MC10]
Length = 332
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 29/198 (14%)
Query: 74 GDNRAGIEG----TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK-----S 124
G +R G+ G + R+ IR I G R+ + + G D + L K
Sbjct: 99 GGHRVGLTGRTVLSGGRVEHIRD----ISGFNVRIAKEIQGAADDILPHLLDRKRKRVMH 154
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQK-----------RVVIVDTSNEIGGD-GDIPHS 172
L + P GKTT++R++AR +S + K +V I+D +EI G +P
Sbjct: 155 SLILSPPQQGKTTLLRDLARQIS--YGKWGNSSVHWPGMKVGIIDERSEIAGCLRGVPGF 212
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
+G R V + + + M+ + + P+V+IVDEIG +A A G+ +I TA
Sbjct: 213 DVGP--RTDVMDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATA 270
Query: 233 HGEWLENIIKNPILSDLI 250
HG ++++ P LS L+
Sbjct: 271 HGSSVQDMRGRPALSGLL 288
>gi|121534513|ref|ZP_01666336.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
gi|121307006|gb|EAX47925.1| AAA ATPase [Thermosinus carboxydivorans Nor1]
Length = 349
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 92/191 (48%), Gaps = 15/191 (7%)
Query: 72 FGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHID--MVYDLLHYGK--SIL 126
G +R G+ G + +++ K A + R+ R V G D M Y + G+ S L
Sbjct: 119 IAGGHRVGLAGQVIVHDGTVKALKNA-TSMNIRLAREVKGCADPLMPYLIGPDGRLYSTL 177
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARR 179
+ P GKTT++R+I R LS ++ +V +VD +EI +P +G R
Sbjct: 178 LISPPRCGKTTLLRDIIRQLSSGVRQLNFSGVQVGLVDERSEIAACVSGVPTMDLGP--R 235
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
+ V + + ++ + + P+V++ DE+G +A A + GV+++ T HG +
Sbjct: 236 VDVLDGCPKASGLLMLLRSMAPQVLVTDELGRGEDAAAIQEALHAGVVVVATVHGRDIAG 295
Query: 240 IIKNPILSDLI 250
I + P + +LI
Sbjct: 296 IAQRPYVGELI 306
>gi|329924766|ref|ZP_08279755.1| stage III sporulation protein AA [Paenibacillus sp. HGF5]
gi|328940431|gb|EGG36754.1| stage III sporulation protein AA [Paenibacillus sp. HGF5]
Length = 332
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 92/198 (46%), Gaps = 29/198 (14%)
Query: 74 GDNRAGIEG----TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK-----S 124
G +R G+ G + R+ IR I G R+ + + G D + L K
Sbjct: 99 GGHRVGLTGRTVLSGGRVEHIRD----ISGFNVRIAKEIQGAADDILPHLLDRKRKRVMH 154
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQK-----------RVVIVDTSNEIGGD-GDIPHS 172
L + P GKTT++R++AR +S + K +V I+D +EI G +P
Sbjct: 155 SLILSPPQQGKTTLLRDLARQIS--YGKWGNSSVHWPGMKVGIIDERSEIAGCLRGVPGF 212
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
+G R V + + + M+ + + P+V+IVDEIG +A A G+ +I TA
Sbjct: 213 DVGP--RTDVMDGCPKAEGMMMMIRSMSPDVLIVDEIGRPEDAEAVIEALHAGISVIATA 270
Query: 233 HGEWLENIIKNPILSDLI 250
HG ++++ P LS L+
Sbjct: 271 HGSSVQDMRGRPALSGLL 288
>gi|357012942|ref|ZP_09077941.1| stage III sporulation protein AA [Paenibacillus elgii B69]
Length = 328
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 68/133 (51%), Gaps = 10/133 (7%)
Query: 126 LFVGRPGVGKTTVMREIARVL----SDEFQKR---VVIVDTSNEIGGD-GDIPHSAIGTA 177
L V P GKTT++R++AR+L +D +R + IVD +EI +P +G
Sbjct: 156 LIVSPPQQGKTTLVRDLARLLGTGGADNGLRRSFKIGIVDERSEIAACVKGVPRFDVGY- 214
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
R V + + + M+ + + PEV+I DEIG +A A GV +I TAHG
Sbjct: 215 -RTDVLDGCPKAEGMMMMIRSMSPEVLIADEIGRAEDALAIHEALHAGVGVIATAHGRDA 273
Query: 238 ENIIKNPILSDLI 250
+ + PIL +L+
Sbjct: 274 AELKRRPILRELL 286
>gi|392426588|ref|YP_006467582.1| stage III sporulation protein AA [Desulfosporosinus acidiphilus
SJ4]
gi|391356551|gb|AFM42250.1| stage III sporulation protein AA [Desulfosporosinus acidiphilus
SJ4]
Length = 340
Score = 55.1 bits (131), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 47/188 (25%), Positives = 81/188 (43%), Gaps = 13/188 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILF----VG 129
G NR G+ G + I L R+ R GH V + L+ +
Sbjct: 123 GGNRVGVTGEAILQKGEVQKLKHISSLNVRLARDYQGHSLRVLPKICRKDGTLYHTLVIS 182
Query: 130 RPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGG-DGDIPHSAIGTARRMQV 182
P GKTT++R++ R++S+ + V ++D E+ G + +P +G +
Sbjct: 183 APRAGKTTLLRDLIRLISNGVPQMGLEGQSVGVIDERGELAGMNKGLPSYNLGCRTDVLD 242
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
P + M+ + + P+V+++DE+G E A + GV ++ TAH LE
Sbjct: 243 GCPKVYGMTML--IRSMAPQVVVMDELGHHDEIEALKDALRTGVRILCTAHASSLEEAKT 300
Query: 243 NPILSDLI 250
P LS L+
Sbjct: 301 RPTLSYLL 308
>gi|333897006|ref|YP_004470880.1| stage III sporulation protein AA [Thermoanaerobacterium
xylanolyticum LX-11]
gi|333112271|gb|AEF17208.1| stage III sporulation protein AA [Thermoanaerobacterium
xylanolyticum LX-11]
Length = 334
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 83/168 (49%), Gaps = 15/168 (8%)
Query: 97 IVGLTCRVGRAVSGHID--MVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSD--- 148
+ GL R+ R G D M Y ++ Y + + L + P GKTT++R+IAR +S+
Sbjct: 128 VSGLNYRIMRQCIGSSDEIMRY-IVKYPEVVNNTLIISPPQCGKTTLIRDIARNISNGMP 186
Query: 149 --EFQ-KRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 204
F ++V IVD +EI IP + +G R V + +H ++ + + P+VI
Sbjct: 187 ELNFHGEKVSIVDERSEIAACFKGIPQNDVGY--RTDVLDLCPKHIGILMMIRSMSPKVI 244
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGG 252
I DEIG + + GV +I T HG +E++ + + +++
Sbjct: 245 ITDEIGKVEDIASIHEALNAGVSIITTVHGNDVEDVARKKYIDEMLNN 292
>gi|253576304|ref|ZP_04853634.1| stage III sporulation protein AA [Paenibacillus sp. oral taxon 786
str. D14]
gi|251844197|gb|EES72215.1| stage III sporulation protein AA [Paenibacillus sp. oral taxon 786
str. D14]
Length = 343
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 81/170 (47%), Gaps = 21/170 (12%)
Query: 97 IVGLTCRVGRAVSGHIDMVY----DLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDE 149
I G R+ R + G D + D H K++ L + P GKTT++R++AR +S
Sbjct: 133 ISGFNVRIAREIRGIADPILPRLLDFRH--KTVYHTLILSPPQQGKTTLIRDLARQISSG 190
Query: 150 FQK---------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENH 199
+V ++D +EI G +P +G R V + + + ++ + +
Sbjct: 191 TWGHPEASWPGLKVAVIDERSEIAGSKRGVPGFDMGP--RTDVMDGCPKAEGIMMMIRSM 248
Query: 200 MPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
P+VIIVDEIG +A A GV +I TAHG ++++ P LS L
Sbjct: 249 SPDVIIVDEIGRPEDAEALAEALHAGVRVIATAHGSSVDDLAARPALSRL 298
>gi|154498058|ref|ZP_02036436.1| hypothetical protein BACCAP_02039 [Bacteroides capillosus ATCC
29799]
gi|150273048|gb|EDN00205.1| putative stage III sporulation protein AA [Pseudoflavonifractor
capillosus ATCC 29799]
Length = 314
Score = 54.7 bits (130), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 75/158 (47%), Gaps = 9/158 (5%)
Query: 100 LTCRVGRAVSGHIDMVYDLLHYG---KSILFVGRPGVGKTTVMREIARVLSDE---FQKR 153
L+ RV R+V G + D L +S L + PG GKTT++R+I R +SD R
Sbjct: 128 LSIRVARSVPGISAGILDGLTVNGLLQSTLILSPPGGGKTTLLRDIIRAVSDGDGVTPMR 187
Query: 154 VVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 212
V I D E+ D +P +G RR V + + ++ + P+V+ DEI
Sbjct: 188 VGIADERGELAAMYDGLPQLDVG--RRTDVLDGCPKGTALLMLLRGMNPQVLAADEITAP 245
Query: 213 AEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A+ A + A GV L+ TAH E++ P+ L+
Sbjct: 246 ADCAALEAAANCGVTLLATAHASGTEDLSSRPLYRRLL 283
>gi|167770749|ref|ZP_02442802.1| hypothetical protein ANACOL_02095 [Anaerotruncus colihominis DSM
17241]
gi|167667344|gb|EDS11474.1| putative stage III sporulation protein AA [Anaerotruncus
colihominis DSM 17241]
Length = 318
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 84/183 (45%), Gaps = 8/183 (4%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD--LLHYGKSILFVGRP 131
G +RAG+ T + + I + R+ R + G D + + +L G P
Sbjct: 105 GGHRAGVAATAVVEDGLVASVRDITSINLRIAREIFGCADQLIRGYFMDRPCGLLLAGAP 164
Query: 132 GVGKTTVMREIARVLSDE---FQKRVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSL 187
GKTT++R++AR LS ++V +VD S EIG G + + +G + P
Sbjct: 165 ASGKTTLLRDLARQLSSGTPGVYRKVCVVDESGEIGASSGGLIQNDLGPCCDLLAGYP-- 222
Query: 188 QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILS 247
+ K + A+ PE+II DEI TEAE A + GV ++ + H E + + ++
Sbjct: 223 KAKGLQIAIRYLSPEIIICDEIATEAEIEAVAAAVNSGVAVVTSVHAASFEELYRKRMIG 282
Query: 248 DLI 250
L
Sbjct: 283 RLF 285
>gi|114566101|ref|YP_753255.1| stage III sporulation protein spoIIIAA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
gi|114337036|gb|ABI67884.1| stage III sporulation protein spoIIIAA [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 313
Score = 54.3 bits (129), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 11/132 (8%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGDIPHSAIG---TAR 178
L + P GKTT++R+IAR +S + I+D +EI G H +
Sbjct: 159 LIISPPRCGKTTILRDIARSISTGSSACPPHNIAIIDERSEIAGT----HRGLAQLDVGI 214
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
R V + + M+ A+ + P+V+I DEIG + + A + GV +I + H LE
Sbjct: 215 RSDVLDACPKSWGMMMAIRSLSPQVLIADEIGRKEDVEALQECVNAGVAVICSIHARNLE 274
Query: 239 NIIKNPILSDLI 250
+ K P++ L+
Sbjct: 275 ELSKRPLIKKLL 286
>gi|83590379|ref|YP_430388.1| hypothetical protein Moth_1536 [Moorella thermoacetica ATCC 39073]
gi|83573293|gb|ABC19845.1| conserved hypothetical protein [Moorella thermoacetica ATCC 39073]
Length = 350
Score = 54.3 bits (129), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 101/228 (44%), Gaps = 25/228 (10%)
Query: 34 DLGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISA-IRS 92
DLGR EA RS+ ++EE +S G +R G+ G + IR+
Sbjct: 95 DLGRTIEA---------LTRSSLYALEE--ELRSGYITISGGHRVGLVGEAVVLQGEIRT 143
Query: 93 RKGAIVGLTCRVGRAVSGHI-DMVYDLLHYGKSI--LFVGRPGVGKTTVMREIARVLSDE 149
K GL R+ R + G ++ LL G+ + L + P GKTT++R++ R+LS
Sbjct: 144 LKN-FAGLNLRLARDIPGCARSLIPYLLEGGRPLHTLILSPPRCGKTTLLRDLIRLLSTG 202
Query: 150 FQK------RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPE 202
+ V +VD +EI G +P +G R V + + M+ + + PE
Sbjct: 203 VPELKFSGVNVGVVDERSEIAGCWLGVPQLEVGP--RTDVLDRCPKAAGMLMLLRSMGPE 260
Query: 203 VIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
VI DEIG E A + + GV ++ + H LE + P L+
Sbjct: 261 VIATDEIGRPEELAALQDVLHAGVTMLASVHAGSLEELQHRPGWGPLL 308
>gi|147677501|ref|YP_001211716.1| hypothetical protein PTH_1166 [Pelotomaculum thermopropionicum SI]
gi|146273598|dbj|BAF59347.1| Uncharacterized protein conserved in bacteria [Pelotomaculum
thermopropionicum SI]
Length = 329
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMV--YDLLHYGKSI-- 125
G +RAGI G R+ A++ I R+ R V G V Y + +G SI
Sbjct: 106 GGHRAGIAGKAVLDGGRVRALK----FISACNIRICREVKGAATKVLPYVIDRHGGSIYH 161
Query: 126 -LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGD-GDIPHSAIGTA 177
+ V P GKTT++R++ R +S+ V +VD +EI G +P +G
Sbjct: 162 TVLVSPPRCGKTTMLRDMVRQISNGIPALGFPGLTVGLVDERSEIAGCYRGVPKLDVGI- 220
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
R V + + + M+ + + P VI DEIG + + A + GV ++ TAHG L
Sbjct: 221 -RTDVLDGCPKAEGMMMLLRSMSPRVIAADEIGRQEDVDALEEVLNAGVKVLITAHGSSL 279
Query: 238 ENIIKNPILSDLI 250
+ + P L +++
Sbjct: 280 AELAERPALGEVL 292
>gi|348667946|gb|EGZ07771.1| hypothetical protein PHYSODRAFT_250107 [Phytophthora sojae]
Length = 296
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 62/116 (53%), Gaps = 15/116 (12%)
Query: 12 PSDLRDR-LQNDSKRGQLLEVILDLGRLPEARYLGEFGGKYLR------STEVSVEELEY 64
PS+ D L D+ R +L++V LD+GR+P Y+ + GK R V+ + ++
Sbjct: 124 PSEYEDAILAIDNYRTKLVDVCLDVGRVP---YV--YTGKKQRVVLSKHGATVAKDTIDE 178
Query: 65 AQSAVG---EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD 117
S +G G DNRAGI LHRIS +RS+ + GL RVGRA+ ++ D
Sbjct: 179 ILSNLGGEMRIGDDNRAGIGRQLHRISVMRSKTDEVYGLPMRVGRALRNATCVLTD 234
>gi|354558158|ref|ZP_08977414.1| stage III sporulation protein AA [Desulfitobacterium
metallireducens DSM 15288]
gi|353548883|gb|EHC18327.1| stage III sporulation protein AA [Desulfitobacterium
metallireducens DSM 15288]
Length = 337
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 11/188 (5%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILF----VG 129
G +R G+ G + + I GL R+ +SG + L L+ +
Sbjct: 117 GGHRVGVTGEVTLKQGMVQNLKHISGLNIRLALEISGQAPQILPRLIRADGSLYHTLILS 176
Query: 130 RPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
P GKTT++R++ R +SD + V +VD EI G H + R +
Sbjct: 177 PPRAGKTTLLRDLIRCISDGVPNLSLKGQTVGVVDERGEIAGMWQ-GHPSYNLGCRTDIL 235
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
+ + M + + P V+ VDE+G + A GV ++ TAH E E K
Sbjct: 236 DGCPKAIGMSMLIRSMSPRVVAVDELGHPQDVEAVLDALRTGVSVLSTAHAESGEEAKKR 295
Query: 244 PILSDLIG 251
P+L L
Sbjct: 296 PVLKALFA 303
>gi|154502445|ref|ZP_02039505.1| hypothetical protein RUMGNA_00258 [Ruminococcus gnavus ATCC 29149]
gi|336434239|ref|ZP_08614039.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_58FAA]
gi|153796841|gb|EDN79261.1| stage III sporulation protein AA [Ruminococcus gnavus ATCC 29149]
gi|336014282|gb|EGN44138.1| stage III sporulation protein AA [Lachnospiraceae bacterium
2_1_58FAA]
Length = 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 76/162 (46%), Gaps = 10/162 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLSDEFQK- 152
I + R+ + G D + ++ + + L + P GKTT++R++ R +SD
Sbjct: 120 ISSVNIRMSHEIPGCADRLLPMITKNREVCHTLVISPPCGGKTTLIRDLIRQISDGNAHV 179
Query: 153 ---RVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
V +VD +EIGG + + +G+ R + + + + MI + + P V+ VDE
Sbjct: 180 KGCTVGVVDERSEIGGCYLGVAQNHLGS--RTDILDCCPKAEGMIMLIRSMSPRVLAVDE 237
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
IG + E A + G LI + HG + I P L +L+
Sbjct: 238 IGAQEEIRAVEYAMQCGCKLIASVHGNSMAEIASKPGLGELV 279
>gi|268608458|ref|ZP_06142185.1| stage III sporulation protein AA [Ruminococcus flavefaciens FD-1]
Length = 330
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 80/176 (45%), Gaps = 12/176 (6%)
Query: 77 RAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKT 136
R GI GT ++ I + R+ R V G + ++ G+S++ G GKT
Sbjct: 106 RVGISGTFSEGGKLKD----ISSMNFRIARQVIGCGEELFSS-TCGRSLIICGAVNSGKT 160
Query: 137 TVMREIARVLSDEFQKRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIE 194
T++R++ R+ + + ++D+ NEI G P + +G + + +H +I
Sbjct: 161 TILRDLCRLYGNAV--KCTLIDSRNEIAAVIKGK-PANDVGMLTDIITGKS--RHDGIIS 215
Query: 195 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
AV P I DEI ++ A R GV I T H + +E +++ ++ L+
Sbjct: 216 AVRTLSPGYIFCDEIADSSDTEAIREGIGCGVKFIATIHADSVEELLRRSVVRTLL 271
>gi|407473829|ref|YP_006788229.1| stage III sporulation protein AA [Clostridium acidurici 9a]
gi|407050337|gb|AFS78382.1| stage III sporulation protein AA [Clostridium acidurici 9a]
Length = 326
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 76/165 (46%), Gaps = 13/165 (7%)
Query: 97 IVGLTCRVGRAVSGH----IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
I + R+ R V G I V H + L + P GKTT++R++ R +S+
Sbjct: 130 ISSINIRIAREVMGASNHIIKYVIKNSHSIYNTLIISPPKCGKTTILRDLIRNISNGINS 189
Query: 153 ------RVVIVDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
+V +VD +E+ G + P + +G R + + +H ++ + P+VI
Sbjct: 190 YNFEGLKVGVVDERSELAGTYNGQPQNDLG--YRTDILDGCYKHDGIMILLRAMSPDVIA 247
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
DE+G + A + GV +I T HG L+++ P + D++
Sbjct: 248 TDELGHPNDIKAIYEAMKGGVQIISTVHGANLDDVKNKPNIKDIV 292
>gi|392960834|ref|ZP_10326299.1| stage III sporulation protein AA [Pelosinus fermentans DSM 17108]
gi|421054408|ref|ZP_15517376.1| stage III sporulation protein AA [Pelosinus fermentans B4]
gi|421057110|ref|ZP_15520000.1| stage III sporulation protein AA [Pelosinus fermentans B3]
gi|421067733|ref|ZP_15529177.1| stage III sporulation protein AA [Pelosinus fermentans A12]
gi|421071270|ref|ZP_15532390.1| stage III sporulation protein AA [Pelosinus fermentans A11]
gi|392440766|gb|EIW18426.1| stage III sporulation protein AA [Pelosinus fermentans B4]
gi|392447186|gb|EIW24440.1| stage III sporulation protein AA [Pelosinus fermentans A11]
gi|392448088|gb|EIW25292.1| stage III sporulation protein AA [Pelosinus fermentans A12]
gi|392454731|gb|EIW31553.1| stage III sporulation protein AA [Pelosinus fermentans DSM 17108]
gi|392463665|gb|EIW39564.1| stage III sporulation protein AA [Pelosinus fermentans B3]
Length = 333
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 77/165 (46%), Gaps = 15/165 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMV--YDLLHYGKSI--LFVGRPGVGKTTVMREIARVLS--DEF 150
I GL R+ R V G D + Y + G+ + L + P GKTT++R++ R +S +
Sbjct: 134 INGLNIRLAREVKGCADQIIPYIITKEGQVLNTLIISPPRCGKTTILRDLIRQISMGSKI 193
Query: 151 QK--RVVIVDTSNEIGGDGDIPHSAIGTAR---RMQVPEPSLQHKVMIEAVENHMPEVII 205
K V +VD +EI S I T R V + + M+ + + P V+
Sbjct: 194 YKGLPVGVVDERSEIAA----CKSGISTVDLGIRTDVLDNCPKAMGMLMLIRSMSPAVVA 249
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
DE+G + HA R GV ++ T HG+ L ++ P + +L+
Sbjct: 250 TDELGRAEDIHAVREALNAGVSVVTTVHGKDLNELLHRPYIGELL 294
>gi|421074477|ref|ZP_15535509.1| stage III sporulation protein AA [Pelosinus fermentans JBW45]
gi|392527518|gb|EIW50612.1| stage III sporulation protein AA [Pelosinus fermentans JBW45]
Length = 333
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 77/166 (46%), Gaps = 15/166 (9%)
Query: 96 AIVGLTCRVGRAVSGHIDMV--YDLLHYGKSI--LFVGRPGVGKTTVMREIARVLS--DE 149
+I GL R+ R V G D + Y + G+ + L + P GKTT++R++ R +S
Sbjct: 133 SINGLNIRLAREVKGCADQIIPYIITKEGQVLNTLIISPPRCGKTTILRDLIRQISMGSN 192
Query: 150 FQK--RVVIVDTSNEIGGDGDIPHSAIGTAR---RMQVPEPSLQHKVMIEAVENHMPEVI 204
K V +VD +EI S I T R V + + M+ + + P V+
Sbjct: 193 IYKGLPVGVVDERSEIAA----CKSGISTVDLGIRTDVLDNCPKAMGMLMLIRSMSPAVV 248
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
DE+G + HA R GV ++ T HG+ L ++ P + +L+
Sbjct: 249 ATDELGRAEDIHAVREALNAGVSVVTTVHGKDLSELLHRPYVGELL 294
>gi|334137167|ref|ZP_08510612.1| stage III sporulation protein AA [Paenibacillus sp. HGF7]
gi|333605365|gb|EGL16734.1| stage III sporulation protein AA [Paenibacillus sp. HGF7]
Length = 397
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 64/126 (50%), Gaps = 9/126 (7%)
Query: 132 GVGKTTVMREIARVLS--DEFQKR----VVIVDTSNEIGG-DGDIPHSAIGTARRMQVPE 184
G G RE AR S D Q+R V IVD +EI + +P +G R V +
Sbjct: 216 GSGLEAGSREPARRPSAPDRPQRRAGWKVGIVDERSEIAASERGVPRFDLGP--RTDVLD 273
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ + M+ + + PEV+IVDEIG +A A R G+ +I TAHG L ++ + P
Sbjct: 274 ACPKAEGMMMMIRSMSPEVLIVDEIGRHEDAEAIREALHAGIRIIATAHGRDLGDVKRRP 333
Query: 245 ILSDLI 250
+L +L+
Sbjct: 334 VLRELL 339
>gi|261366974|ref|ZP_05979857.1| putative stage III sporulation protein AA [Subdoligranulum
variabile DSM 15176]
gi|282571092|gb|EFB76627.1| putative stage III sporulation protein AA [Subdoligranulum
variabile DSM 15176]
Length = 296
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 80/185 (43%), Gaps = 19/185 (10%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM-VYDLLHYGKS-ILFVGRP 131
G NR G+ G HR + + I L RV R ++ + V + L G +L G P
Sbjct: 98 GGNRIGVAG--HRCTGGFT---TITSLNLRVARWLTCDLPAPVCEYLTTGSGGLLVAGAP 152
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA-RRMQVPEPSLQHK 190
G GKTT +R + R LSD + V +VD E+ D G A +R+ V
Sbjct: 153 GSGKTTFLRTLVRYLSDT-DEIVCVVDERGELMMSDD------GQAQQRLPVCCDVYTRC 205
Query: 191 VMIEAVENHM----PEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL 246
E ++ + P I+ DE+GT A+ A G+ + + H + + + K P L
Sbjct: 206 SKAEGIQMALRCMNPRYIVCDELGTTADTAAVERGVASGICFLASVHCDSPQALQKKPQL 265
Query: 247 SDLIG 251
+ L
Sbjct: 266 ARLCA 270
>gi|357038632|ref|ZP_09100429.1| stage III sporulation protein AA [Desulfotomaculum gibsoniae DSM
7213]
gi|355359424|gb|EHG07186.1| stage III sporulation protein AA [Desulfotomaculum gibsoniae DSM
7213]
Length = 350
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 77/165 (46%), Gaps = 16/165 (9%)
Query: 99 GLTCRVGRAVSGHIDMVYDLL------HYGKSILFVGRPGVGKTTVMREIARVLSD---- 148
GL RV R + G D + L + +++F P GKTT++R++ R +S+
Sbjct: 150 GLNIRVCREIKGAADGLIKHLIDRKVNNVYHTVIF-SPPRCGKTTLLRDLVRQVSNGVPG 208
Query: 149 -EFQKRVV-IVDTSNEIGG-DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVII 205
F R V +VD +EI G +P +G R V + + + M+ + P+VI+
Sbjct: 209 LHFAGRTVGVVDERSEIAGCHRGVPQMDVGV--RTDVLDGCPKAQGMMILLRAMSPDVIV 266
Query: 206 VDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
DEIG + HA + GV +I T HG L + P L ++
Sbjct: 267 TDEIGRMEDIHALEEVFNAGVRVIVTIHGSSLRELTNRPALKYML 311
>gi|312127950|ref|YP_003992824.1| aaa atpase [Caldicellulosiruptor hydrothermalis 108]
gi|311777969|gb|ADQ07455.1| AAA ATPase [Caldicellulosiruptor hydrothermalis 108]
Length = 313
Score = 52.8 bits (125), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 93/184 (50%), Gaps = 25/184 (13%)
Query: 74 GDNRAGIEGTLHRISAIRSRKG---AIVGLTCRVGRAVSGH-----IDMVYDLLHYGKSI 125
G +R G+ G + S++G +I GL RV +AV ++V + L+ +
Sbjct: 95 GGHRIGVAGKFTFENG--SKQGFVSSISGLNIRVSKAVRIEPEKILKNIVKENLNSIYNT 152
Query: 126 LFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGG-DGDIPHSAIGT 176
L + PG GKTT++R I R+LS F RVV++D +EI D D IG
Sbjct: 153 LIISPPGCGKTTLLRNIIRILSSGEGILAGRGF--RVVVIDERSEICAVDND--RREIGI 208
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E
Sbjct: 209 --RTFVLDGVDKLRGILMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAES 266
Query: 237 LENI 240
+++I
Sbjct: 267 VKDI 270
>gi|205374061|ref|ZP_03226861.1| mutants block sporulation after engulfment [Bacillus coahuilensis
m4-4]
Length = 294
Score = 52.4 bits (124), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 8/124 (6%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGD-GDIPHSAIGT 176
K + +G P GKTT++R++AR +S + +V IVD +EI G +P +G
Sbjct: 137 KHTMIIGPPQSGKTTLLRDLARFVSSGNGQGIPSFKVGIVDERSEIAGCVKGVPQLELGN 196
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R+ V + + + M+ + + P+V++VDEIG + + A GV L+ + HG
Sbjct: 197 --RVDVLDGCPKVEGMMMLIRSMSPDVLVVDEIGRKEDGDAILEAVNAGVTLMMSIHGSS 254
Query: 237 LENI 240
L+++
Sbjct: 255 LQDV 258
>gi|402571564|ref|YP_006620907.1| stage III sporulation protein AA [Desulfosporosinus meridiei DSM
13257]
gi|402252761|gb|AFQ43036.1| stage III sporulation protein AA [Desulfosporosinus meridiei DSM
13257]
Length = 356
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 51/188 (27%), Positives = 78/188 (41%), Gaps = 13/188 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILF----VG 129
G NR G+ G I L R+ R + G + LL L+ +
Sbjct: 137 GGNRVGLTGEAVLQDGQLQTLKHISSLNLRIARDIQGQSLKILPLLLNSAGQLYHTLLIS 196
Query: 130 RPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTARRMQV 182
P GKTT++R++ R +S+ K V +VD E+ G IP +G R V
Sbjct: 197 PPRAGKTTLLRDLIRSISNGVPKLRLEGQTVGVVDERGELAGMWQGIPTYDLGL--RTDV 254
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + M V + P+V+ VDE+G + A GV ++ TAH LE
Sbjct: 255 LDGCPKASGMSMMVRSMSPQVLAVDELGHAEDVVAINDALRTGVRILSTAHAGTLEEARS 314
Query: 243 NPILSDLI 250
PI++ L+
Sbjct: 315 RPIITHLL 322
>gi|345861748|ref|ZP_08814000.1| stage III sporulation protein AA [Desulfosporosinus sp. OT]
gi|344325141|gb|EGW36667.1| stage III sporulation protein AA [Desulfosporosinus sp. OT]
Length = 315
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 50/188 (26%), Positives = 80/188 (42%), Gaps = 13/188 (6%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI----LFVG 129
G NR GI G + I L R+ R + G + LL L +
Sbjct: 98 GGNRVGITGEVISQHGQIQMMKHISSLNLRIARDIPGRGLKILPLLLGADGTFAHTLLIS 157
Query: 130 RPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTARRMQV 182
P GKTT++R++ R++S+ + V +VD E+ G +P +G R V
Sbjct: 158 PPRAGKTTLLRDLIRLISNGVPQLGLMGLTVGVVDERGELAGMWQGVPTYNLGY--RTDV 215
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ + M V + P+VI +DE+G + +A GV ++ TAH +E
Sbjct: 216 LDGCPKATGMNMIVRSMAPQVIAMDELGHADDVNALMDALRTGVRILSTAHASSIEEARN 275
Query: 243 NPILSDLI 250
PIL+ L+
Sbjct: 276 RPILAHLL 283
>gi|312793180|ref|YP_004026103.1| aaa atpase [Caldicellulosiruptor kristjanssonii 177R1B]
gi|312180320|gb|ADQ40490.1| AAA ATPase [Caldicellulosiruptor kristjanssonii 177R1B]
Length = 313
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 34/166 (20%)
Query: 96 AIVGLTCRVGRAV------------SGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIA 143
+I GL RV +AV ++D +Y+ L + PG GKTT++R I
Sbjct: 118 SISGLNIRVSKAVRIEPEKILKNIVKENLDSIYN-------TLIISPPGCGKTTLLRNII 170
Query: 144 RVLSDE--------FQKRVVIVDTSNEIGG-DGDIPHSAIGTARRMQVPEPSLQHKVMIE 194
R+LS F RVV++D +EI D D IG R V + + + ++
Sbjct: 171 RILSSGEGILAGRGF--RVVVIDERSEICAVDND--RREIGI--RTFVLDGVDKLRGILM 224
Query: 195 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
AV + P++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 225 AVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAESVKDI 270
>gi|171185782|ref|YP_001794701.1| type II secretion system protein E [Pyrobaculum neutrophilum
V24Sta]
gi|170934994|gb|ACB40255.1| type II secretion system protein E [Pyrobaculum neutrophilum
V24Sta]
Length = 342
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 64/150 (42%), Gaps = 12/150 (8%)
Query: 93 RKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
RK +G + G + +Y + GK I+ G PG GKTT++ + ++ Q+
Sbjct: 171 RKKLRIGDLLKSGFLTLEQLQEIYRYVREGKHIVVTGPPGSGKTTLLVALDDIIPPNLQR 230
Query: 153 RVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTE 212
V +D ++E D D I +M+ SL + +VI V E+ E
Sbjct: 231 --VYIDEADEFEEDPDKNQIKIHNVNKMREVYASLNRNI----------DVIFVGELQYE 278
Query: 213 AEAHACRSIAERGVMLIGTAHGEWLENIIK 242
HA R+ E G+ + T H +E ++
Sbjct: 279 DHFHAFRTATEMGIQTLATMHSTSVEGALR 308
>gi|344995705|ref|YP_004798048.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
gi|343963924|gb|AEM73071.1| AAA ATPase [Caldicellulosiruptor lactoaceticus 6A]
Length = 313
Score = 51.6 bits (122), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 81/159 (50%), Gaps = 20/159 (12%)
Query: 96 AIVGLTCRVGRAVSGH-----IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDE- 149
+I GL RV +AV ++V + L + L + PG GKTT++R I R+LS
Sbjct: 118 SISGLNIRVSKAVRIEPEKILKNIVKENLDSIYNTLIISPPGCGKTTLLRNIIRILSSGE 177
Query: 150 -------FQKRVVIVDTSNEIGG-DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
F RVV++D +EI D D IG R V + + + ++ AV + P
Sbjct: 178 GILAGRGF--RVVVIDERSEICAVDND--RREIGI--RTFVLDGVDKLRGILMAVRSLNP 231
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
++I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 232 QIIAMDELGSPSDYLAVCEASKMGVKIIATMHAESVKDI 270
>gi|374993713|ref|YP_004969212.1| stage III sporulation protein AA [Desulfosporosinus orientis DSM
765]
gi|357212079|gb|AET66697.1| stage III sporulation protein AA [Desulfosporosinus orientis DSM
765]
Length = 353
Score = 51.6 bits (122), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 87/210 (41%), Gaps = 14/210 (6%)
Query: 52 LRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGH 111
+ + V E ++ Q + GG NR GI G + + I L R+ R +SG
Sbjct: 114 MTQSSVYAAEEDFRQGFITLPGG-NRVGITGKIILLHGNIQTIKHISSLNLRIARDISGL 172
Query: 112 IDMVYDLLHYG----KSILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSN 161
+ LL + L + P GKTT +R++ R +S+ + V +VD
Sbjct: 173 ASKILPLLLSDDGNVRHTLIISPPRAGKTTFLRDLIRSISNGVPQIGLRGLTVGVVDERG 232
Query: 162 EIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRS 220
E+ G +P +G + P M+ V + P+V+ +DEIG + A
Sbjct: 233 ELAGMWQGVPTYDLGLQTDIMDSCPKASGLSML--VRSMSPQVVAMDEIGHMDDVAAITD 290
Query: 221 IAERGVMLIGTAHGEWLENIIKNPILSDLI 250
GV ++ TAH E + P ++ L+
Sbjct: 291 ALRTGVRILCTAHASSFEEAHRRPAIAALL 320
>gi|339629557|ref|YP_004721200.1| hypothetical protein TPY_3305 [Sulfobacillus acidophilus TPY]
gi|379007324|ref|YP_005256775.1| hypothetical protein [Sulfobacillus acidophilus DSM 10332]
gi|339287346|gb|AEJ41457.1| hypothetical protein TPY_3305 [Sulfobacillus acidophilus TPY]
gi|361053586|gb|AEW05103.1| hypothetical protein Sulac_1606 [Sulfobacillus acidophilus DSM
10332]
Length = 292
Score = 51.2 bits (121), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 71/258 (27%), Positives = 103/258 (39%), Gaps = 42/258 (16%)
Query: 8 WQILPSDLRDRLQNDSKRGQ--LLEVILDLGRLPEARYLGEFGGKYLRSTEVS------- 58
WQ LP+ R L + Q L EV LGR P Y G G + L + +V
Sbjct: 6 WQWLPNPWRQALMDLPHELQTSLEEVRFRLGR-PVVLY-GGHGWQPLVAPKVPERVTQAD 63
Query: 59 -------------VEELEYAQSAVGEFGGDNRAGIEGTL----HRISAIRSRKGAIVGLT 101
LE + G +R G+ G +I+ +R A+ GL
Sbjct: 64 LNRIVDILADFSLYARLEELRQGFLTLPGGHRVGLAGYAVGEGSQIATLR----AVTGLN 119
Query: 102 CRVGRAVSGHIDMVYDLLH-----YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVI 156
R RA + D+ ++ YG S L G P GKTT +R++ R+ S+ RVV+
Sbjct: 120 FRRARAFT---DIGLSVMEAVGSPYG-SWLLAGPPRSGKTTFLRDLIRLWSNR-GLRVVV 174
Query: 157 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
+D EI G + V E + + A+ P+VI VDEIG+ E
Sbjct: 175 IDERLEIAGGSQSEGFSFDVGLHTDVLEAWPKLAGISVAIRTLGPDVIAVDEIGSVDELA 234
Query: 217 ACRSIAERGVMLIGTAHG 234
A + GV ++ T H
Sbjct: 235 AVSRARQAGVTVLATVHA 252
>gi|158320654|ref|YP_001513161.1| sporulation stage III protein AA [Alkaliphilus oremlandii OhILAs]
gi|158140853|gb|ABW19165.1| Sporulation stage III protein AA [Alkaliphilus oremlandii OhILAs]
Length = 351
Score = 51.2 bits (121), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 88/189 (46%), Gaps = 15/189 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGR----AVSGHIDMVYDLLHYGKSILFV 128
G +R GI G L + IR+ K GL R+ R +G + + + + L V
Sbjct: 123 GGHRIGIVGKVLLDNNGIRTLKNY-SGLNIRISREKLGVATGVLPHIINAKGELMNTLIV 181
Query: 129 GRPGVGKTTVMREIARVLSD-----EFQK-RVVIVDTSNEIGGDGD-IPHSAIGTARRMQ 181
P GKTT++R++ R++S F+ +V +VD +E+G +P + +G +
Sbjct: 182 SPPQCGKTTLLRDVIRMVSTGVPHMNFRGLKVGVVDERSELGACFQGVPQNDLGPRTDIL 241
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
P + +M+ + P+VI DEIG E + A G+ LI T H LENI+
Sbjct: 242 DSCPKAEGIMML--IRAMSPQVIATDEIGREEDMIAIDEAIMAGIKLITTVHSRSLENIL 299
Query: 242 KNPILSDLI 250
++ L+
Sbjct: 300 SKRVVGKLV 308
>gi|325290033|ref|YP_004266214.1| stage III sporulation protein AA [Syntrophobotulus glycolicus DSM
8271]
gi|324965434|gb|ADY56213.1| stage III sporulation protein AA [Syntrophobotulus glycolicus DSM
8271]
Length = 344
Score = 51.2 bits (121), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 51/178 (28%), Positives = 77/178 (43%), Gaps = 14/178 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSI---LFVG 129
G +R G+ G L ++RS K I L R+ + G ++ LL K I L +
Sbjct: 118 GGHRVGLAGEVLLEKGSVRSLK-HISALNIRIAHELEGETKLLQYLLDQEKDICNTLIIS 176
Query: 130 RPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQV 182
P GKTTV+R + + LS+ + V +VD EI G IP +G +
Sbjct: 177 PPRAGKTTVLRMLIKTLSNGLPAIQLAGQPVGVVDERGEIAGIWQGIPAFDLGIRTDILD 236
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
P M+ + + P V+ VDE+G + + GV +I TAH +E I
Sbjct: 237 RTPKALGIAML--IRSMSPSVVAVDELGAPEDVRSLEDAVRCGVKIIATAHAGSIEEI 292
>gi|295695388|ref|YP_003588626.1| stage III sporulation protein AA [Kyrpidia tusciae DSM 2912]
gi|295410990|gb|ADG05482.1| stage III sporulation protein AA [Kyrpidia tusciae DSM 2912]
Length = 348
Score = 50.8 bits (120), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 76/166 (45%), Gaps = 11/166 (6%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYG----KSILFVGRPGVGKTTVMREIARVLS-DEFQ 151
I GL R+ + V G ++ L G S L + P GKTT++R++A LS +
Sbjct: 139 ITGLNFRIAKPVVGVSRVLAPWLIDGMCRPASTLILSPPQCGKTTLLRDLAYHLSIGAWH 198
Query: 152 KRV-----VIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIV 206
RV +VD +E+ G H R V + + + M+ V + PEV+I
Sbjct: 199 PRVPPLKVAVVDERSELAGTFQGRHYH-DLGPRTDVLDGCPKAEGMMMMVRSMSPEVLIT 257
Query: 207 DEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLIGG 252
DE+G A+ A GV+++ +AH L++ P L L+ G
Sbjct: 258 DEVGGAADIAALMEAVGSGVVVLASAHAASLDDAESRPALRPLLEG 303
>gi|312622749|ref|YP_004024362.1| AAA atpase [Caldicellulosiruptor kronotskyensis 2002]
gi|312203216|gb|ADQ46543.1| AAA ATPase [Caldicellulosiruptor kronotskyensis 2002]
Length = 313
Score = 50.8 bits (120), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 80/158 (50%), Gaps = 18/158 (11%)
Query: 96 AIVGLTCRVGRAV---SGHI--DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDE- 149
+I GL RV + V S I ++ D L + L + PG GKTT++R I R+LS
Sbjct: 118 SISGLNIRVAKTVRIESEKILKSIMKDSLDSIYNTLIISPPGCGKTTLLRNIIRILSSGE 177
Query: 150 -------FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPE 202
F RVV++D +EI + IG R V + + + ++ AV + P+
Sbjct: 178 GILAGKGF--RVVVIDERSEICPKNN-DRREIGI--RTFVLDGVDKLRGILMAVRSLNPQ 232
Query: 203 VIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
+I +DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 233 IIAMDELGSPSDYLAVCEASKMGVRIIATMHAESIKDI 270
>gi|222528982|ref|YP_002572864.1| ATPase AAA [Caldicellulosiruptor bescii DSM 6725]
gi|222455829|gb|ACM60091.1| AAA ATPase [Caldicellulosiruptor bescii DSM 6725]
Length = 313
Score = 50.8 bits (120), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 80/156 (51%), Gaps = 14/156 (8%)
Query: 96 AIVGLTCRVGRAV---SGHI--DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDE- 149
+I GL RV + V S I +V + L + L + PG GKTT++R I R+LS
Sbjct: 118 SISGLNIRVAKTVRIESEKILKSIVKENLDSIYNTLIISPPGCGKTTLLRNIIRILSSGE 177
Query: 150 -----FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 204
RVV++D +EI + + IG R V + + + ++ AV + P++I
Sbjct: 178 GILAGRGLRVVVIDERSEICTENN-DKREIGI--RTFVLDGVDKLRGILMAVRSLNPQII 234
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENI 240
+DE+G+ ++ A ++ GV +I T H E +++I
Sbjct: 235 AMDELGSPSDYLAVCEASKMGVRIIATMHAESIKDI 270
>gi|312134806|ref|YP_004002144.1| aaa atpase [Caldicellulosiruptor owensensis OL]
gi|311774857|gb|ADQ04344.1| AAA ATPase [Caldicellulosiruptor owensensis OL]
Length = 313
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 54/191 (28%), Positives = 92/191 (48%), Gaps = 39/191 (20%)
Query: 74 GDNRAGIEGTLHRISAIRSRKG---AIVGLTCRVGR------------AVSGHIDMVYDL 118
G +R G+ G + S++G +I GL R+ + AV ++D +Y+
Sbjct: 95 GGHRVGVAGKFTFENG--SKQGFVNSISGLNIRISKTVRIEPERILKHAVKENLDSIYN- 151
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGG-DGDI 169
L + PG GKTT++R I R+LS F RVV++D +EI D D
Sbjct: 152 ------TLIISPPGCGKTTLLRNIVRILSSGEGILAGRGF--RVVVIDERSEICMVDND- 202
Query: 170 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
IG R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I
Sbjct: 203 -RREIGI--RTFVLDGVDKLRGVLMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKII 259
Query: 230 GTAHGEWLENI 240
T H E +++I
Sbjct: 260 ATMHAESVKDI 270
>gi|384135427|ref|YP_005518141.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289512|gb|AEJ43622.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 337
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 107/242 (44%), Gaps = 40/242 (16%)
Query: 9 QILPSDLRDRLQNDSKR-GQLLEVILDLGRLPEARYL---GEFGGKYLRSTEVSVEEL-- 62
Q L DL D L+ R GQ LE+ L +L GE R VS +EL
Sbjct: 31 QSLRDDLLDELEEIRLRAGQPLELCLRQ----RPAFLAEDGELTQSPHRGVRVSADELAQ 86
Query: 63 ------EYAQSAVGE--------FGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGR- 106
++++ AV E G +R GI G + +R+ + + L R+ R
Sbjct: 87 VVQRLTQFSRYAVEEDMRHGYVTLPGGHRVGIAGRAVVEAGHVRAFR-HVTSLNVRISRD 145
Query: 107 ---AVSGHIDMVYDLLHYGK-SILFVGRPGVGKTTVMREIARVLS------DEFQKRVVI 156
A + + +YD + S L V P GKTT++R++AR LS D +V +
Sbjct: 146 HPGAAASVLPFLYDRVSRRPLSSLIVSPPQCGKTTLVRDVARRLSYGDFAPDNPGLKVAV 205
Query: 157 VDTSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 215
+D +EI G D IP +G R V + + + M+ A+ + P V++ DEIG +A
Sbjct: 206 IDERSEIAGSVDGIPQFDLGP--RADVLDGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDA 263
Query: 216 HA 217
A
Sbjct: 264 EA 265
>gi|336427118|ref|ZP_08607122.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_57FAA_CT1]
gi|336009971|gb|EGN39958.1| stage III sporulation protein AA [Lachnospiraceae bacterium
3_1_57FAA_CT1]
Length = 319
Score = 50.4 bits (119), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/175 (29%), Positives = 82/175 (46%), Gaps = 21/175 (12%)
Query: 74 GDNRAGIEG--TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHY-GK--SILFV 128
G +R G+ G L IR+ K I + R+ + G D V L+ G+ + L +
Sbjct: 100 GGHRMGLAGEVVLSERDKIRNIK-HISCINIRISHEIKGAADTVLPFLYREGRFLNTLII 158
Query: 129 GRPGVGKTTVMREIARVLSDEFQK----RVVIVDTSNEIGGDGDIPHSAIGTAR-----R 179
PG GKTT++R+I R +SD V IVD +EI G S G A+ R
Sbjct: 159 SPPGCGKTTLLRDIIRQVSDGNPYGGGVTVGIVDERSEIAG------SFQGRAQNDVGLR 212
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ + + + M+ + + P+VI VDE+G+E + A + + G ++ T H
Sbjct: 213 TDILDSCPKAEGMMLLIRSMAPKVIGVDELGSEEDIDAMKKVLSCGCAILATIHA 267
>gi|258515805|ref|YP_003192027.1| stage III sporulation protein AA [Desulfotomaculum acetoxidans DSM
771]
gi|257779510|gb|ACV63404.1| stage III sporulation protein AA [Desulfotomaculum acetoxidans DSM
771]
Length = 345
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 64/135 (47%), Gaps = 9/135 (6%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSD-----EFQKRVV-IVDTSNEIGGDG-DIPHSAIG 175
K L V P GKTT++R++ R +S+ F V +VD +E+ G +P +G
Sbjct: 176 KHTLLVSPPRCGKTTLLRDLVRQISNGIPSLSFPGTTVGLVDERSELAGCYYGLPQKDVG 235
Query: 176 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
R V + + + MI + P+VI DEIG + A + GV +I T H
Sbjct: 236 L--RTDVLDACPKAEGMIMLLRAMSPQVIATDEIGRAEDVRALEEVFHAGVKVITTVHAA 293
Query: 236 WLENIIKNPILSDLI 250
++ +I+ P L L+
Sbjct: 294 SIKELIQRPALKYLL 308
>gi|442804014|ref|YP_007372163.1| stage III sporulation protein AA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442739864|gb|AGC67553.1| stage III sporulation protein AA [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 369
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 79/175 (45%), Gaps = 20/175 (11%)
Query: 74 GDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK----SI 125
G +R G+ GT RI IR I L R+ R + G D V + + +
Sbjct: 108 GGHRIGLVGTPVVENDRIINIRD----ISSLNIRIAREIIGFGDGVVKSIFRNRRDIYNT 163
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK-----RVVIVDTSNEIGGDG-DIPHSAIGTARR 179
L + PG+GKTT++R+I R +S + V +VD +EI +P + +G R
Sbjct: 164 LIISPPGMGKTTLLRDIIRSVSSGVENIFDGLNVGVVDERSEIAACYRGVPQNNLGY--R 221
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
V + + M + + P VI VDE+G + + + GV ++ TAHG
Sbjct: 222 TDVINGINKKEGMEILLRSMSPRVIAVDELGNPDDVYTVLKVMNAGVRILATAHG 276
>gi|365134919|ref|ZP_09343478.1| stage III sporulation protein AA [Subdoligranulum sp. 4_3_54A2FAA]
gi|363613246|gb|EHL64764.1| stage III sporulation protein AA [Subdoligranulum sp. 4_3_54A2FAA]
Length = 308
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 75/181 (41%), Gaps = 8/181 (4%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYD--LLHYGKSILFVGRP 131
G +RAG+ GT + I + RV R D V L G +L G P
Sbjct: 102 GGHRAGVCGTAFVDGSGTFTLKNITSINLRVARTGLCACDAVLRPLLCAPGVGLLIAGAP 161
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT--ARRMQVPEPSLQH 189
G GKTT++R + LS +K V VD EI + S T + V +H
Sbjct: 162 GSGKTTLLRAVLAELSAAGRKTAV-VDERFEIA---PVEQSGFCTRLPQHCDVLSGYPKH 217
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDL 249
M A+ P+VI+ DE+G + A A GV L+ T H E + + P + L
Sbjct: 218 IGMQHALRALAPDVIVCDEVGAMEDIAAITQAANAGVGLVVTIHAPDAETLRRRPQYTAL 277
Query: 250 I 250
+
Sbjct: 278 L 278
>gi|347532101|ref|YP_004838864.1| stage III sporulation protein AA [Roseburia hominis A2-183]
gi|345502249|gb|AEN96932.1| stage III sporulation protein AA [Roseburia hominis A2-183]
Length = 316
Score = 50.1 bits (118), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 68/282 (24%), Positives = 119/282 (42%), Gaps = 44/282 (15%)
Query: 9 QILPSDLRDRLQNDSKRGQLLEVILDLGRLP-------EARYLGEFGGKY---------- 51
+I P +R+ L ND+ + L E+ + +G P E+RYL G Y
Sbjct: 7 KIFPVHIREALANDTWKAGLEEIRVRVGS-PLEFIYGGESRYLPGREGAYALPSACGYEN 65
Query: 52 -LRSTEVSVEEL-----EYAQSAVGEFGGDNRAGIEGTLHRIS---AIRSRKGAIVGLT- 101
R T + E+ +Y+ A E + IEG HRI + + G + GL+
Sbjct: 66 GYRMTPEDLREMLNYISDYSLYAYSEEVKEGYLTIEGG-HRIGMAGQVVKKDGKVTGLSH 124
Query: 102 -----CRVGRAVSGHIDMVYDLLHYGKSI---LFVGRPGVGKTTVMREIARVLS----DE 149
R+ G D + + I L + PG+GKTT +R++ R LS
Sbjct: 125 ITFLNVRIAHEKRGCADDILPHIRRSDGIYNTLMLSPPGIGKTTFLRDLIRQLSAGDAGA 184
Query: 150 FQKRVVIVDTSNEIGGDG-DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+V +VD +EI IP + +G R V + + + + + + P+++ VDE
Sbjct: 185 PGMKVGVVDERSEIAACHLGIPQNDLGP--RTDVLDGCKKTEGIRMLLRSMSPQILAVDE 242
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+G + + A + G ++GT H ++ ++ P L +
Sbjct: 243 LGGKEDFAAVKQALCCGCRVLGTVHAGCVQELLDKPYLQACV 284
>gi|410667979|ref|YP_006920350.1| stage III sporulation protein AA [Thermacetogenium phaeum DSM
12270]
gi|409105726|gb|AFV11851.1| stage III sporulation protein AA [Thermacetogenium phaeum DSM
12270]
Length = 330
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 84/193 (43%), Gaps = 22/193 (11%)
Query: 74 GDNRAGIEG--TLHR--ISAIRSRKGAIVGLTCRVGRAVSGH----IDMVYDLLHY-GKS 124
G +R G+ G L R I +R I L R+ RAV G + V D +
Sbjct: 106 GGHRVGLAGKAVLERGDIKTLRD----IGSLNFRIARAVPGSARPLLPYVLDFRNKRPYH 161
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTA 177
L V P GKTT++R+I R LS + V +VD E+ +P +G
Sbjct: 162 TLLVSPPCAGKTTLLRDIIRSLSYGIPELHFPALSVGVVDERCELAACYQGVPQHDLGP- 220
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
R+ V + + MI + + P+VI DEIG + +A + GV ++ T H
Sbjct: 221 -RVDVLDRCPKAAGMIILLRSMAPQVIATDEIGRCEDINAIWEMLYTGVSILATVHASSW 279
Query: 238 ENIIKNPILSDLI 250
E + + P L D++
Sbjct: 280 EELERRPYLQDVV 292
>gi|150390255|ref|YP_001320304.1| sporulation stage III, protein AA [Alkaliphilus metalliredigens
QYMF]
gi|149950117|gb|ABR48645.1| Sporulation stage III, protein AA [Alkaliphilus metalliredigens
QYMF]
Length = 346
Score = 49.7 bits (117), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 83/193 (43%), Gaps = 23/193 (11%)
Query: 74 GDNRAGIEGTLHRISAIRSRKGA-----IVGLTCRVGRAVSG----HIDMVYDLLHYGKS 124
G +R GI G A++ + G GL RV R G + + D H +
Sbjct: 117 GGHRIGIVG-----KAVKDKTGVKTLKDFTGLNIRVAREKKGIALPLLSHLIDHNHEMLN 171
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTA 177
L V P GKTT++R+I R +S ++ +V +VD +EI + + +G
Sbjct: 172 TLIVSPPQCGKTTLLRDIIRNISRGVEEISLKGHKVGVVDERSEIAASFQGVAQNDLGP- 230
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
R V + + M+ + P+VI DEIG + A G+ LI T HG L
Sbjct: 231 -RTDVLDACPKAIGMMMLIRAMSPDVIATDEIGRHEDGMAIEEAIMAGIKLITTVHGNSL 289
Query: 238 ENIIKNPILSDLI 250
+ I+ ++ LI
Sbjct: 290 DEILGRKVIGHLI 302
>gi|423073519|ref|ZP_17062258.1| stage III sporulation protein AA [Desulfitobacterium hafniense DP7]
gi|361855597|gb|EHL07560.1| stage III sporulation protein AA [Desulfitobacterium hafniense DP7]
Length = 361
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL----FV 128
G +R GI G + + +++ K I L R+ +AV G +++ L + L +
Sbjct: 134 GGHRVGITGEAIMKQGEVQTLK-HISALNIRLAKAVEGKAELILPRLLTKEGTLHHTLIL 192
Query: 129 GRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQ 181
P GKTT++R++ R LSD + V +VD E+ G IP +G R
Sbjct: 193 SPPRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGIPAYNLGC--RTD 250
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
+ + + + + + P+V+ VDE+G + A GV ++ TAH + +
Sbjct: 251 ILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMSEAL 310
Query: 242 KNPILSDLI 250
+ P L L
Sbjct: 311 RRPTLKALF 319
>gi|219669535|ref|YP_002459970.1| stage III sporulation protein AA [Desulfitobacterium hafniense
DCB-2]
gi|219539795|gb|ACL21534.1| stage III sporulation protein AA [Desulfitobacterium hafniense
DCB-2]
Length = 361
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL----FV 128
G +R GI G + + +++ K I L R+ +AV G +++ L + L +
Sbjct: 134 GGHRVGITGEAIMKQGEVQTLK-HISALNIRLAKAVEGKAELILPKLLTKEGTLHHTLIL 192
Query: 129 GRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQ 181
P GKTT++R++ R LSD + V +VD E+ G IP +G R
Sbjct: 193 SPPRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGIPAYNLGC--RTD 250
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
+ + + + + + P+V+ VDE+G + A GV ++ TAH + +
Sbjct: 251 ILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMSEAL 310
Query: 242 KNPILSDLI 250
+ P L L
Sbjct: 311 RRPTLKALF 319
>gi|392394445|ref|YP_006431047.1| stage III sporulation protein AA [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390525523|gb|AFM01254.1| stage III sporulation protein AA [Desulfitobacterium dehalogenans
ATCC 51507]
Length = 359
Score = 49.3 bits (116), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/189 (25%), Positives = 85/189 (44%), Gaps = 15/189 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS----ILFV 128
G +R GI G + + +++ K I L R+ +AV G +++ L + L +
Sbjct: 132 GGHRVGITGEAIMKNGEVQTLK-HISALNIRLAKAVEGRAELILPKLLTKEGALHHTLIL 190
Query: 129 GRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQ 181
P GKTT++R++ R LSD + V +VD E+ G IP +G R
Sbjct: 191 SPPRGGKTTLLRDLIRRLSDGSPGLNLPGQTVGVVDERRELAGMWQGIPAYNLGC--RTD 248
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
+ + + + + + P+V+ VDE+G + A GV ++ TAH ++ +
Sbjct: 249 ILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHASNMDEAL 308
Query: 242 KNPILSDLI 250
K P L L
Sbjct: 309 KRPTLRSLF 317
>gi|89895121|ref|YP_518608.1| hypothetical protein DSY2375 [Desulfitobacterium hafniense Y51]
gi|89334569|dbj|BAE84164.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 330
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 84/189 (44%), Gaps = 15/189 (7%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL----FV 128
G +R GI G + + +++ K I L R+ +AV G +++ L + L +
Sbjct: 103 GGHRVGITGEAIMKQGEVQTLK-HISALNIRLAKAVEGKAELILPRLLTKEGTLHHTLIL 161
Query: 129 GRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTARRMQ 181
P GKTT++R++ R LSD + V +VD E+ G +P +G R
Sbjct: 162 SPPRAGKTTLLRDLIRRLSDGSPALNLPGQTVGVVDERRELAGMWQGVPAYNLGC--RTD 219
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
+ + + + + + P+V+ VDE+G + A GV ++ TAH + +
Sbjct: 220 ILDGCPKRMGINMLIRSMAPQVVAVDELGHPEDVEAVLDALRTGVKILSTAHAATMSEAL 279
Query: 242 KNPILSDLI 250
+ P L L
Sbjct: 280 RRPTLKALF 288
>gi|78044260|ref|YP_360826.1| sporulation protein [Carboxydothermus hydrogenoformans Z-2901]
gi|77996375|gb|ABB15274.1| putative sporulation protein [Carboxydothermus hydrogenoformans
Z-2901]
Length = 315
Score = 48.9 bits (115), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 79/160 (49%), Gaps = 15/160 (9%)
Query: 97 IVGLTCRVGRAVSGHIDMV--YDLLHYGKSI--LFVGRPGVGKTTVMREIARVLSDEFQK 152
+ + R+ R + G + + Y + G+ + L + P GKTT++R++AR+ ++ +
Sbjct: 118 VCSINIRIAREIKGVAEKIVPYLINKNGEPVNTLILSPPRSGKTTMLRDLARIFANGSAQ 177
Query: 153 ------RVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVI 204
V IVD +EI G+ P +G R V + + + MI + + P++I
Sbjct: 178 IGIPGIPVGIVDERSEIAACYKGE-PQLDVGI--RADVLDGCPKAQGMIILLRSMAPKLI 234
Query: 205 IVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ DEIG E + A +A GV + +AH ++++ K P
Sbjct: 235 VTDEIGREEDVGALIEVANAGVAVFTSAHARDMDDLKKRP 274
>gi|430750198|ref|YP_007213106.1| stage III sporulation protein AA [Thermobacillus composti KWC4]
gi|430734163|gb|AGA58108.1| stage III sporulation protein AA [Thermobacillus composti KWC4]
Length = 331
Score = 48.9 bits (115), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 62/127 (48%), Gaps = 13/127 (10%)
Query: 124 SILFVGRPGVGKTTVMREIARVLS----------DEFQKRVVIVDTSNEIGGD-GDIPHS 172
S L V P GKTT++R+I R +S D ++V +VD +EI +P
Sbjct: 154 STLIVAPPQQGKTTMLRDIIRSVSYGSWPMPEARDWPARKVGVVDERSEIAACVRGVPVF 213
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
+G R V + + + M+ + + PE++ DEIG +A A R A GV +I TA
Sbjct: 214 DVGP--RTDVLDACPKAEGMMMLLRSMSPELLAADEIGRPEDAEAIREAAHAGVPVIATA 271
Query: 233 HGEWLEN 239
H L++
Sbjct: 272 HASDLQD 278
>gi|224114563|ref|XP_002316796.1| predicted protein [Populus trichocarpa]
gi|222859861|gb|EEE97408.1| predicted protein [Populus trichocarpa]
Length = 64
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 163 IGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIA 222
+GG +GT VP P +V IE VENHMP+V ++DEIGT+ EA A +IA
Sbjct: 3 LGGKPLARFQHLGTLFYRIVPSP---FRVFIEEVENHMPQVSVIDEIGTKLEAMAVSTIA 59
Query: 223 ER 224
+
Sbjct: 60 QH 61
>gi|421836386|ref|ZP_16270884.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001627]
gi|409741749|gb|EKN41434.1| stage III sporulation protein AA [Clostridium botulinum
CFSAN001627]
Length = 241
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 52/93 (55%), Gaps = 9/93 (9%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ------KRVVIVDTSNEIGGDGD-IPHSAIGTAR 178
+ + P GKTT++R+I++ +SD K+V ++D +EI G + +P +G
Sbjct: 141 IIISPPKCGKTTIIRDISKKISDGVDALNLKGKKVSVIDERSEIAGSYNGVPQLDVGL-- 198
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGT 211
R V + + + ++ A+ + PEVII DEIGT
Sbjct: 199 RTDVLDNCPKSEGIVMAIRSMAPEVIICDEIGT 231
>gi|291530816|emb|CBK96401.1| Uncharacterized protein conserved in bacteria [Eubacterium siraeum
70/3]
Length = 303
Score = 48.1 bits (113), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 39 PEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGT-LHRISAIRSRKGAI 97
P++ L E +++ + E + A + +GG +RAG+ GT ++ +++ K
Sbjct: 63 PDSEMLAECISAICQNS-LHTYEKDIANGFITLYGG-HRAGLCGTAVYSNGGLQTVKN-F 119
Query: 98 VGLTCRVGRAVSGHIDMVYDLLHYGKS------ILFVGRPGVGKTTVMREIARVLSDEFQ 151
+ R+ R H DLL +S +L VGR GKTT++R++ R + F
Sbjct: 120 SSINIRIARQ---HYGAARDLLPLFESECRSRGLLIVGRALSGKTTILRDLCRCIGGMF- 175
Query: 152 KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
RV ++D EI +G P +G V + +I AV P+ I+ DE+
Sbjct: 176 -RVSLIDERQEIAAVYNGK-PCLDVGLM--TDVFSGYGKSDGIIRAVRCMSPDYIVTDEL 231
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
G A+A + R G LI TAH + +E +N
Sbjct: 232 G--ADAKSIRQAVNSGSGLIMTAHADSIEEAYRN 263
>gi|302872161|ref|YP_003840797.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
gi|302575020|gb|ADL42811.1| AAA ATPase [Caldicellulosiruptor obsidiansis OB47]
Length = 313
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 15/124 (12%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDE--------FQKRVVIVDTSNEIGG-DGDIPHSAIGT 176
L + PG GKTT++R I R+LS F RVV++D +EI D D IG
Sbjct: 153 LIISPPGCGKTTLLRNIVRILSSGEGILAGRGF--RVVVIDERSEICMVDND--RREIGI 208
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
R V + + + ++ AV + P++I +DE+G+ ++ A ++ GV +I T H E
Sbjct: 209 --RTFVLDGVDKLRGVLMAVRSLNPQIIAMDELGSPSDYLAVCEASKMGVKIIATMHAES 266
Query: 237 LENI 240
+++I
Sbjct: 267 VKDI 270
>gi|317122021|ref|YP_004102024.1| ATPase AAA [Thermaerobacter marianensis DSM 12885]
gi|315592001|gb|ADU51297.1| AAA ATPase [Thermaerobacter marianensis DSM 12885]
Length = 391
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 25/187 (13%)
Query: 63 EYAQSAVGEFGGDNRAGIEGTLH----RISAIRSRKGAIVGLTCRVGRAVSG-HIDMVYD 117
E A+ G +R G+ G + RI R + GL R RAV G ++
Sbjct: 141 EQARQGFLTLPGGHRVGLAGEVQVEGGRIERFRR----VRGLVIRRARAVEGCAAPLLPW 196
Query: 118 LLHYGK------SILFVGRPGVGKTTVMREIARVLSDEFQ-----KRVVIVDTSNEIGGD 166
L+ G+ S L +G P GKTT++R++AR+ +RV +VD E+
Sbjct: 197 LVERGRAGPRLASTLLLGPPASGKTTLLRDLARLAGTGLPGRLTAQRVAVVDERGELAAG 256
Query: 167 GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
G A R V E + ++ A+ PEV+I DE+G +A A GV
Sbjct: 257 G-----AFDLGPRTAVLEHCPKQAGIVLALRALSPEVLITDELGGPGDAVAVADAVRAGV 311
Query: 227 MLIGTAH 233
++ TAH
Sbjct: 312 TVVATAH 318
>gi|167750486|ref|ZP_02422613.1| hypothetical protein EUBSIR_01462 [Eubacterium siraeum DSM 15702]
gi|167656637|gb|EDS00767.1| putative stage III sporulation protein AA [Eubacterium siraeum DSM
15702]
Length = 303
Score = 47.8 bits (112), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 39 PEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGT-LHRISAIRSRKGAI 97
P++ L E +++ + E + A + +GG +RAG+ GT ++ +++ K
Sbjct: 63 PDSEMLAECISAICQNS-LHTYEKDIANGFITLYGG-HRAGLCGTAVYGNGGLQTVKN-F 119
Query: 98 VGLTCRVGRAVSGHIDMVYDLLHYGKS------ILFVGRPGVGKTTVMREIARVLSDEFQ 151
+ R+ R H DLL +S +L VGR GKTT++R++ R + F
Sbjct: 120 SSINIRIARQ---HYGAARDLLPLFESKCRSRGLLIVGRALSGKTTILRDLCRCIGGMF- 175
Query: 152 KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
RV ++D EI +G P +G V + +I AV P+ I+ DE+
Sbjct: 176 -RVSLIDERQEIAAVYNGK-PCLDVGLM--TDVFSGYGKSDGIIRAVRCMSPDYIVTDEL 231
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
G +AE + R G LI TAH + +E +N
Sbjct: 232 GADAE--SIRQAVNSGSGLIMTAHADSIEEAYRN 263
>gi|313243707|emb|CBY42347.1| unnamed protein product [Oikopleura dioica]
Length = 185
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 61/135 (45%), Gaps = 10/135 (7%)
Query: 73 GGDNRAGIEGTLHRISAIRSRKGAIVGLTCRV--GRAVSGHIDMVYDLLHYGKSILFVGR 130
G D + I+GTLH IS + G +V LT +V + + DL+ K++
Sbjct: 40 GFDGQYYIDGTLHEISLLEI--GKVVALTVQVVLPKVDPSQLKKAEDLIATKKAL----- 92
Query: 131 PGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHK 190
+ R + R+LS++ V ++D + I G G I H ++G R V P
Sbjct: 93 KTIDDENFCRNVCRLLSEDESLSVFVLDLNGRICGHGAIAHWSVGDVRMFPVKNPD-DLN 151
Query: 191 VMIEAVENHMPEVII 205
++ V H P+VII
Sbjct: 152 SHLQNVLKHHPDVII 166
>gi|160945210|ref|ZP_02092436.1| hypothetical protein FAEPRAM212_02729 [Faecalibacterium prausnitzii
M21/2]
gi|158442941|gb|EDP19946.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii M21/2]
Length = 302
Score = 47.8 bits (112), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 76/186 (40%), Gaps = 41/186 (22%)
Query: 64 YAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL--HY 121
Y +AVG NR G+ G + + L R+ R+ + D L +
Sbjct: 101 YLTTAVG-----NRVGVAGQFVQREGQCIALQKVTSLNLRIARSCVIPLPPALDKLLEQH 155
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNE-------------IGGDGD 168
+L VG PG GKTT++R IAR L+ E Q+ V ++D E IGG
Sbjct: 156 FTGLLVVGEPGSGKTTLLRTIARTLA-ERQRLVAVIDERGELFPPEGPLPPLERIGG--- 211
Query: 169 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVML 228
+ AR +Q+ A+ P+VI++DE+G+ E A GV
Sbjct: 212 -----VDKARAVQM------------ALRTLAPQVILLDELGSLEETMALEQGFFSGVDF 254
Query: 229 IGTAHG 234
I + H
Sbjct: 255 IASIHA 260
>gi|333979376|ref|YP_004517321.1| stage III sporulation protein AA [Desulfotomaculum kuznetsovii DSM
6115]
gi|333822857|gb|AEG15520.1| stage III sporulation protein AA [Desulfotomaculum kuznetsovii DSM
6115]
Length = 336
Score = 47.4 bits (111), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 75/169 (44%), Gaps = 20/169 (11%)
Query: 97 IVGLTCRVGRAVSGHIDMVYDLLHYG-----KSI---LFVGRPGVGKTTVMREIARVLSD 148
I L R+ R V G + LL + KSI L P GKTT++R+I R LS+
Sbjct: 138 ISSLNIRISREVPG---LATPLLPHLIDRRLKSIYHTLIFSPPRCGKTTLLRDIIRQLSN 194
Query: 149 EFQK------RVVIVDTSNEIGGD-GDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMP 201
+ V +VD +E+ G +P +G R V + + + MI + + P
Sbjct: 195 GAPELDLPGLTVGVVDERSELAGCYRGVPQRDVGV--RTDVLDGCPKAEGMIMLLRSMAP 252
Query: 202 EVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+VI DEIG + + A + GV ++ T HG L + P L L
Sbjct: 253 QVIATDEIGRDEDIAALEEVFHAGVRVLVTVHGASLAELAARPALQHLF 301
>gi|376262665|ref|YP_005149385.1| Flp pilus assembly protein, ATPase CpaF [Clostridium sp. BNL1100]
gi|373946659|gb|AEY67580.1| Flp pilus assembly protein, ATPase CpaF [Clostridium sp. BNL1100]
Length = 479
Score = 47.4 bits (111), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A +D + + L YG SI G GKTT+ + + D KR+ ++ S E+
Sbjct: 224 GTATEAMLDFLAECLRYGISICVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSREL 281
Query: 164 G----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
DG + +S I T RM E S+ ++++ PE+I V E+ EA+A
Sbjct: 282 ALVRQRDGKVCNSVIHTLTRMSENEKQSIDQDILLDMALRFNPEIICVGEM-RGPEAYAA 340
Query: 219 RSIAERGVMLIGTAHGEWLE 238
+ A G ++ T H E
Sbjct: 341 QESARTGHTVLTTIHSNSCE 360
>gi|258511760|ref|YP_003185194.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478486|gb|ACV58805.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 334
Score = 47.0 bits (110), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 34/239 (14%)
Query: 9 QILPSDLRDRLQNDSKR-GQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEEL----- 62
Q L DL D L+ R GQ LE+ L R GE R VS +EL
Sbjct: 28 QGLSDDLLDELEEIRLRAGQPLELCLR-QRPAFLAEDGELTQSPHRGVRVSADELAQVLQ 86
Query: 63 ---EYAQSAVGE--------FGGDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGR---- 106
++++ AV E G +R GI G + +R+ + + L R+ R
Sbjct: 87 RLTQFSRYAVEEDMRHGYVTLPGGHRVGIAGRAVVEAGHVRAFR-HVTSLNVRISRDHPG 145
Query: 107 AVSGHIDMVYDLLHYGK-SILFVGRPGVGKTTVMREIARVLS-DEFQK-----RVVIVDT 159
A + + +YD + S L V P GKTT++R++AR S +F +V ++D
Sbjct: 146 AAASVMPFLYDRVSRRPLSSLIVSPPQCGKTTLVRDVARRFSYGDFALVDPGLKVAVIDE 205
Query: 160 SNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
+EI G D IP +G R V + + + M+ A+ + P V++ DEIG +A A
Sbjct: 206 RSEIAGSVDGIPQFDLGP--RADVLDGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDAEA 262
>gi|218289649|ref|ZP_03493869.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
LAA1]
gi|218240299|gb|EED07482.1| stage III sporulation protein AA [Alicyclobacillus acidocaldarius
LAA1]
Length = 335
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 101/240 (42%), Gaps = 40/240 (16%)
Query: 11 LPSDLRDRLQNDSKR-GQLLEVILDLGRLPEARYLGEFGGKYLRSTEVSVEEL------- 62
L DL D L+ R GQ LE+ L R GE R VS EL
Sbjct: 31 LSDDLLDELEEIRLRVGQPLELCLR-QRPAFLAEDGELTRSPHRCVRVSASELAQVLQRL 89
Query: 63 -EYAQSAVGE--------FGGDNRAGIEGTL----HRISAIRSRKGAIVGLTCRVGR--- 106
++++ AV E G +R GI G + A R + L R+ R
Sbjct: 90 TQFSRYAVEEDMRHGYVTLPGGHRVGIAGRAVVEGGHVRAFRH----VTSLNVRISRDHP 145
Query: 107 -AVSGHIDMVYDLLHYGK-SILFVGRPGVGKTTVMREIARVLS------DEFQKRVVIVD 158
A + + +YD S L V P GKTT++R++AR S D+ +V ++D
Sbjct: 146 GAAAAVLPSLYDRASRRPLSSLIVSPPQCGKTTLVRDVARRFSYGDFAPDDHGLKVAVID 205
Query: 159 TSNEIGGDGD-IPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
+EI G D +P +G R V + + + M+ A+ + P V++ DEIG +A A
Sbjct: 206 ERSEIAGSVDGVPQFDLGP--RADVLDGCPKAEGMMMAIRSLSPHVVVTDEIGRMEDAEA 263
>gi|335356398|ref|ZP_08548268.1| type II secretion system protein E [Lactobacillus animalis KCTC
3501]
Length = 324
Score = 47.0 bits (110), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 64/126 (50%), Gaps = 15/126 (11%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-P 183
++F G G GKTT M ++A+ ++ Q++V+ ++ EI D + ++QV P
Sbjct: 134 VIFAGPMGSGKTTAMYQLAK---NQKQQQVMCIEDPIEIREDSFL---------QVQVNP 181
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
+ + + +++A H P++ IV EI A A + A G +++ T H +I+
Sbjct: 182 KAQMDYSTLLKAALRHHPDIFIVGEIRDRQTARAVLTAALSGHLVLSTLHATSAYGVIER 241
Query: 244 PILSDL 249
L+DL
Sbjct: 242 --LADL 245
>gi|18313110|ref|NP_559777.1| conjugal transfer protein [Pyrobaculum aerophilum str. IM2]
gi|18160619|gb|AAL63959.1| conjugal transfer protein, conjectural [Pyrobaculum aerophilum str.
IM2]
Length = 343
Score = 47.0 bits (110), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 69/154 (44%), Gaps = 13/154 (8%)
Query: 90 IRSRKGAI-VGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSD 148
IR +G I V + G + VY + G+ I+ G PG GKTT++ I ++
Sbjct: 167 IRIHRGKIAVADMLKSGFITEEQLKTVYAWVKEGRHIVITGPPGSGKTTLLSVIDDLIPG 226
Query: 149 EFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDE 208
+ Q+ V +D ++E D D I +++ SL + ++II+ E
Sbjct: 227 QLQR--VYIDEADEFDDDPDKNQIKIRNVNKLREVYASLNRNI----------DIIIIGE 274
Query: 209 IGTEAEAHACRSIAERGVMLIGTAHGEWLENIIK 242
+ E +A ++ E G+ + T H +++ +K
Sbjct: 275 LQYEEHFNAFKTAVEIGLQTLATMHATSVKDALK 308
>gi|374579571|ref|ZP_09652665.1| stage III sporulation protein AA [Desulfosporosinus youngiae DSM
17734]
gi|374415653|gb|EHQ88088.1| stage III sporulation protein AA [Desulfosporosinus youngiae DSM
17734]
Length = 354
Score = 46.6 bits (109), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 23/193 (11%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHI--------DMVYDLLHYGKS 124
G NR GI G + + I++ K I L R+ R V G D + H
Sbjct: 137 GGNRVGITGEAVLQQGQIQTIK-HISSLNLRIARDVPGLGLKILPLLLDEEGGIFH---- 191
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTA 177
L + P GKTT++R++ R +S+ + V +VD E+ G +P +G
Sbjct: 192 TLLISPPRAGKTTLLRDLIRSISNGVPQLGLRGQTVGVVDERGELAGMWQGVPTYDLGY- 250
Query: 178 RRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
R + + + + M V + P+V+ VDE+G + A GV ++ TAH +
Sbjct: 251 -RTDILDGCPKARGMSIMVRSMSPQVLAVDELGHREDVIAIADALRTGVQILSTAHAGTI 309
Query: 238 ENIIKNPILSDLI 250
E P++S+L+
Sbjct: 310 EEARSRPVISNLL 322
>gi|291557678|emb|CBL34795.1| Uncharacterized protein conserved in bacteria [Eubacterium siraeum
V10Sc8a]
Length = 303
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 58/214 (27%), Positives = 98/214 (45%), Gaps = 22/214 (10%)
Query: 39 PEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGT-LHRISAIRSRKGAI 97
P++ L E +++ + E + A + +GG +RAG+ GT ++ +++ K
Sbjct: 63 PDSEMLAECISAICQNS-LHTYEKDIANGFITLYGG-HRAGLCGTAVYGNGGLQTVKN-F 119
Query: 98 VGLTCRVGRAVSGHIDMVYDLLHYGKS------ILFVGRPGVGKTTVMREIARVLSDEFQ 151
+ R+ R H DLL +S +L VGR GKTT++R++ R + F
Sbjct: 120 SSINIRIARQ---HYGAARDLLPLFESKCRSRGLLIVGRALSGKTTILRDLCRCIGGMF- 175
Query: 152 KRVVIVDTSNEIGG--DGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
RV ++D EI +G P +G V + +I AV P+ I+ DE+
Sbjct: 176 -RVSLIDERQEIAAVYNGK-PCLDVGLM--TDVFSGYGKTDGIIRAVRCMSPDYIVTDEL 231
Query: 210 GTEAEAHACRSIAERGVMLIGTAHGEWLENIIKN 243
G +AE + + G LI TAH + +E +N
Sbjct: 232 GADAE--SIKQAVNSGSGLIMTAHADSIEEAYRN 263
>gi|431794356|ref|YP_007221261.1| stage III sporulation protein AA [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784582|gb|AGA69865.1| stage III sporulation protein AA [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 349
Score = 46.2 bits (108), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 85/185 (45%), Gaps = 15/185 (8%)
Query: 74 GDNRAGIEG-TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVY-DLLHYGKSI---LFV 128
G +R GI G + + +++ K I L RV +AV G + + LL S+ L +
Sbjct: 124 GGHRVGITGEAILKQGQVQTLK-HISALNIRVAKAVEGKAEHILPKLLKRDGSLYHTLIL 182
Query: 129 GRPGVGKTTVMREIARVLSD-----EFQKRVV-IVDTSNEIGGDGD-IPHSAIGTARRMQ 181
P GKTT++R++ + +SD Q + V +VD E+ G IP +G R
Sbjct: 183 SPPRAGKTTLLRDLIQKISDGSPTLHTQGQTVGVVDERRELAGMWQGIPAYNLGY--RTD 240
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
+ + + + + + P+VI VDE+G + A GV ++ TAH LE +
Sbjct: 241 ILDGCPKRMGINMLIRSMSPQVIAVDELGHPEDVEAVLDALRTGVKILSTAHALNLEEAL 300
Query: 242 KNPIL 246
P L
Sbjct: 301 SRPTL 305
>gi|258514752|ref|YP_003190974.1| type II secretion system protein E [Desulfotomaculum acetoxidans
DSM 771]
gi|257778457|gb|ACV62351.1| type II secretion system protein E [Desulfotomaculum acetoxidans
DSM 771]
Length = 474
Score = 45.8 bits (107), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SN 161
R G A +D + + L YG S+ G GKTT+ + + D KR+ ++ S
Sbjct: 217 RGGTATGAMLDFLAECLRYGISVCVAGATSSGKTTLAGWLLTTIPDS--KRIFTIENGSR 274
Query: 162 EIG----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E+ DG + +S I T RM E ++ ++++ PE+I V E+ EA+
Sbjct: 275 ELALVRQKDGKVCNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAY 333
Query: 217 ACRSIAERGVMLIGTAHGEWLE 238
A + A G ++ T H E
Sbjct: 334 AAQESARTGHTVLTTIHSNSCE 355
>gi|167628704|ref|YP_001679203.1| type ii/iv secretion system protein [Heliobacterium modesticaldum
Ice1]
gi|410667092|ref|YP_006919463.1| type II secretion system protein E [Thermacetogenium phaeum DSM
12270]
gi|167591444|gb|ABZ83192.1| type ii/iv secretion system protein [Heliobacterium modesticaldum
Ice1]
gi|409104839|gb|AFV10964.1| type II secretion system protein E [Thermacetogenium phaeum DSM
12270]
Length = 483
Score = 45.4 bits (106), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 65/140 (46%), Gaps = 9/140 (6%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A + +D + + L YG S+ G GKTTV + + D KR+ ++ S E+
Sbjct: 228 GTATAEMLDFLAECLRYGISVCVAGATSSGKTTVAGWLLTTIPD--SKRIFTIENGSREL 285
Query: 164 G----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
DG I +S I T R E ++ ++++ PEVI V E+ + +EA+A
Sbjct: 286 ALVRKRDGKIVNSVIHTLTRSSENEKQNIDQDMLLDMALRFNPEVICVGEMRS-SEAYAA 344
Query: 219 RSIAERGVMLIGTAHGEWLE 238
+ A G ++ T H E
Sbjct: 345 QEAARTGHTVLTTIHSNSCE 364
>gi|410657082|ref|YP_006909453.1| Stage III sporulation protein AA [Dehalobacter sp. DCA]
gi|410660119|ref|YP_006912490.1| Stage III sporulation protein AA [Dehalobacter sp. CF]
gi|409019437|gb|AFV01468.1| Stage III sporulation protein AA [Dehalobacter sp. DCA]
gi|409022475|gb|AFV04505.1| Stage III sporulation protein AA [Dehalobacter sp. CF]
Length = 352
Score = 45.4 bits (106), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQK------RVVIVDTSNEIGGDGD-IPHSAIGTAR 178
L V P GKTT++R + + LS+ + V +VD +EI G IP +G
Sbjct: 181 LLVSPPRAGKTTMLRFLVKNLSNGVPQLNLKGHTVGVVDERSEIAGMWQGIPSFDLGCRT 240
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
+ P Q +M+ + + PEV+ VDE+G +A A GV ++ T H L+
Sbjct: 241 DVLDRCPKAQGLIML--IRSMAPEVVAVDELGGREDAAALGEAVRCGVKILATVHAGSLD 298
Query: 239 NIIKNPILSDLI 250
+ K L +L+
Sbjct: 299 ELQKRAHLRELL 310
>gi|357037152|ref|ZP_09098952.1| type II secretion system protein E [Desulfotomaculum gibsoniae DSM
7213]
gi|355361317|gb|EHG09072.1| type II secretion system protein E [Desulfotomaculum gibsoniae DSM
7213]
Length = 474
Score = 45.4 bits (106), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SN 161
R G A +D + + L YG S+ G GKTT+ + + D KR+ ++ S
Sbjct: 217 RGGTATEPMLDFLAECLRYGISVCVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSR 274
Query: 162 EIG----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E+ DG + +S I T RM E ++ ++++ PE+I V E+ EA+
Sbjct: 275 ELALVRQKDGKVCNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAY 333
Query: 217 ACRSIAERGVMLIGTAHGEWLE 238
A + A G ++ T H E
Sbjct: 334 AAQESARTGHTVLTTIHSNSCE 355
>gi|302387443|ref|YP_003823265.1| type II secretion system protein E [Clostridium saccharolyticum
WM1]
gi|302198071|gb|ADL05642.1| type II secretion system protein E [Clostridium saccharolyticum
WM1]
Length = 450
Score = 45.1 bits (105), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 69/143 (48%), Gaps = 13/143 (9%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A + +D++ + + YG S+ G GKTTV + + D KR+ ++ S E+
Sbjct: 194 GTATAEMLDLLSEFIRYGISVCIAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSREL 251
Query: 164 G----GDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAH 216
DG + +S + T R E L I+ V+ + P++I+V E+ AEA+
Sbjct: 252 SLIREKDGRVTNSVVHTLTRNS--ENELYRIEQIDLVDISLRFNPDIIVVGEMRG-AEAN 308
Query: 217 ACRSIAERGVMLIGTAHGEWLEN 239
A + +A GV ++ T H E+
Sbjct: 309 AAQEVARTGVAVVTTIHSNSCES 331
>gi|410584372|ref|ZP_11321475.1| hypothetical protein ThesuDRAFT_00062 [Thermaerobacter subterraneus
DSM 13965]
gi|410504307|gb|EKP93818.1| hypothetical protein ThesuDRAFT_00062 [Thermaerobacter subterraneus
DSM 13965]
Length = 403
Score = 45.1 bits (105), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 51/183 (27%), Positives = 75/183 (40%), Gaps = 17/183 (9%)
Query: 63 EYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL--- 119
E A+ G +R G+ G + R + GL R R VSG + L
Sbjct: 168 EQARQGFLTLPGGHRVGLAGEVQVEGGRVERFRRVRGLVIRRARPVSGCATPLLPYLVEP 227
Query: 120 ----HYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-----KRVVIVDTSNEIGGDGDIP 170
S L +G P GKTT++R++AR+ S +RV +VD E+ G
Sbjct: 228 ARPGPCLASTLLIGAPASGKTTLLRDLARLASAGVPGTLAGRRVAVVDERGELAAGG--- 284
Query: 171 HSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 230
A R V E + + A+ PEV++ DE+G +A A GV ++
Sbjct: 285 --AFDLGPRTAVLEHCPKEAGIPLALRALSPEVLVTDELGGPHDAAAVAEAVHAGVTVVA 342
Query: 231 TAH 233
TAH
Sbjct: 343 TAH 345
>gi|325680699|ref|ZP_08160237.1| putative stage III sporulation protein AA [Ruminococcus albus 8]
gi|324107479|gb|EGC01757.1| putative stage III sporulation protein AA [Ruminococcus albus 8]
Length = 294
Score = 45.1 bits (105), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 42/191 (21%), Positives = 76/191 (39%), Gaps = 19/191 (9%)
Query: 71 EFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK--SILFV 128
F R G GT + I + RV R V G ++ + S+L
Sbjct: 86 SFENGCRVGFAGTYAEKDGAVTNIRLINSVCIRVPREVKGCASDIFCKCFSDRPSSVLIF 145
Query: 129 GRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ------- 181
G P GKTT++R++ R+ + R ++D E+ +A+ R M
Sbjct: 146 GAPSSGKTTILRDLTRMCGMVY--RTTLIDERGEL--------AAVYLGRPMNDVGLLTD 195
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
V + + + AV P++I+ DEIG+ + + + GV L+ + H + E +
Sbjct: 196 VFDKYPRKNAIETAVRVMSPQIIVCDEIGSSEDVLSLTYALDSGVKLVCSCHCDSFEELN 255
Query: 242 KNPILSDLIGG 252
+ +L+
Sbjct: 256 SKANICELLSA 266
>gi|452993992|emb|CCQ94462.1| Stage III sporulation protein AB (modular protein) [Clostridium
ultunense Esp]
Length = 266
Score = 44.7 bits (104), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%)
Query: 196 VENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
+ + P+++I DEIG E + A G+ LI TAHGE L+ I K PIL +
Sbjct: 3 IRSMSPQLLITDEIGQEEDVVALLEAINAGIYLIATAHGEKLDEIEKRPILQKIF 57
>gi|89897407|ref|YP_520894.1| hypothetical protein DSY4661 [Desulfitobacterium hafniense Y51]
gi|89336855|dbj|BAE86450.1| hypothetical protein [Desulfitobacterium hafniense Y51]
Length = 450
Score = 44.7 bits (104), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SN 161
R G A +D + + L YG S+ G GKTT+ + + D KR+ ++ S
Sbjct: 193 RGGTATGPMLDFLAECLRYGISVCVAGATSSGKTTLSGWLLTTIPD--NKRIFTIENGSR 250
Query: 162 EIG----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E+ DG + +S I T RM E ++ ++++ PE+I V E+ EA+
Sbjct: 251 ELALVRQKDGRVCNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAY 309
Query: 217 ACRSIAERGVMLIGTAHGEWLE 238
A + A G ++ T H E
Sbjct: 310 AAQESARTGHTVLTTIHSNSCE 331
>gi|160940637|ref|ZP_02087980.1| hypothetical protein CLOBOL_05531 [Clostridium bolteae ATCC
BAA-613]
gi|158436372|gb|EDP14139.1| hypothetical protein CLOBOL_05531 [Clostridium bolteae ATCC
BAA-613]
Length = 454
Score = 44.3 bits (103), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 37/140 (26%), Positives = 62/140 (44%), Gaps = 7/140 (5%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEI- 163
G A +D + + YG S+ G G GKTTVM + ++ D ++ + I + S E
Sbjct: 197 GSATEEMLDFLVCCIRYGVSVCIAGSTGSGKTTVMSWLLSMVPDN-RRLITIEEGSREFD 255
Query: 164 ----GGDGDIPHSAIG-TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
DG I +S + R + P + +++E V P+VI V E+ + EA +
Sbjct: 256 LVKRDADGKILNSVVHLLTRPHENPALDIDQDILLERVLRKHPDVIGVGEMRSAKEALSV 315
Query: 219 RSIAERGVMLIGTAHGEWLE 238
+ G ++ T H E
Sbjct: 316 AESSRTGHTVVTTIHSNSAE 335
>gi|291525762|emb|CBK91349.1| Flp pilus assembly protein, ATPase CpaF [Eubacterium rectale DSM
17629]
Length = 452
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A +D + + L YG SI G GKTT+ + + D KR+ ++ S E+
Sbjct: 196 GTATDEMLDFLAECLRYGISICVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSREL 253
Query: 164 G----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
DG + +S I T R E ++ ++++ PE+I V E+ + +EA+
Sbjct: 254 ALVREKDGKVTNSVIHTLTRFSENEKQNIDQDMLLDMALRFNPEIICVGEMRS-SEAYTA 312
Query: 219 RSIAERGVMLIGTAHGEWLEN 239
+ A G ++ T H E+
Sbjct: 313 QESARTGHTVLTTIHSNSCES 333
>gi|410658027|ref|YP_006910398.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Dehalobacter sp. DCA]
gi|409020382|gb|AFV02413.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Dehalobacter sp. DCA]
Length = 475
Score = 44.3 bits (103), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 64/142 (45%), Gaps = 9/142 (6%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SN 161
R G A +D + + L YG S+ G GKTT+ + + D KR+ ++ S
Sbjct: 218 RGGNATGPMLDFLAECLRYGISVCVAGATSSGKTTLAGWLLTTIPD--NKRIFTIENGSR 275
Query: 162 EIG----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E+ DG + +S I T RM E ++ ++++ PE+I V E+ EA+
Sbjct: 276 ELALVRQKDGRVWNSVIHTLTRMSENEKQNIDQDILLDMALRFNPEIICVGEM-RGPEAY 334
Query: 217 ACRSIAERGVMLIGTAHGEWLE 238
A + A G ++ T H E
Sbjct: 335 AAQESARTGHTVLTTIHSNSCE 356
>gi|289743537|gb|ADD20516.1| replication factor C subunit RFC2 [Glossina morsitans morsitans]
Length = 333
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D F++ V+ ++ SNE G D+ + I + +V
Sbjct: 54 NIIIAGPPGVGKTTTIQCLARILLGDSFKEAVLELNASNERG--IDVVRNKIKMFAQQKV 111
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 112 TLPKGRHKIVILDEADSMTE 131
>gi|25010234|ref|NP_734629.1| hypothetical protein gbs0159 [Streptococcus agalactiae NEM316]
gi|77413407|ref|ZP_00789600.1| competence protein CglA [Streptococcus agalactiae 515]
gi|23094586|emb|CAD45804.1| Unknown [Streptococcus agalactiae NEM316]
gi|77160577|gb|EAO71695.1| competence protein CglA [Streptococcus agalactiae 515]
Length = 323
Score = 44.3 bits (103), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 70/143 (48%), Gaps = 23/143 (16%)
Query: 109 SGHIDMVY--DLLHYGKSIL-------FVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVD 158
SGH D+ Y D + K +L F G G GKTT+M ++A S+ F+ K+++ ++
Sbjct: 110 SGHQDLKYWFDNIKQMKEVLGTRGLYLFSGPVGSGKTTLMYQLA---SEVFKNKQIITIE 166
Query: 159 TSNEIGGDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
EI D + ++Q+ E + + +I+ H P+++I+ EI +A A A
Sbjct: 167 DPVEIKNDKML---------QLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARA 217
Query: 218 CRSIAERGVMLIGTAHGEWLENI 240
+ GVM+ T H + + +
Sbjct: 218 VIRASLTGVMVFSTIHAKSISGV 240
>gi|350272888|ref|YP_004884196.1| hypothetical protein OBV_44920 [Oscillibacter valericigenes
Sjm18-20]
gi|348597730|dbj|BAL01691.1| hypothetical protein OBV_44920 [Oscillibacter valericigenes
Sjm18-20]
Length = 450
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 13/143 (9%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A + +D + + + YG S+ G GKTTV + + D KR+ ++ S E+
Sbjct: 194 GTATAEMLDFLSECIRYGISVCIAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSREL 251
Query: 164 G----GDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAH 216
DG + +S + T R E L I+ V+ + P++I+V E+ AEA+
Sbjct: 252 SLIREKDGRVTNSVVHTLTRNS--ENELYRIEQIDLVDISLRFNPDIIVVGEMRG-AEAN 308
Query: 217 ACRSIAERGVMLIGTAHGEWLEN 239
A + +A GV ++ T H E+
Sbjct: 309 AAQEVARTGVAVVTTIHSNSCES 331
>gi|312870429|ref|ZP_07730550.1| type II/IV secretion system protein [Lactobacillus oris PB013-T2-3]
gi|311094046|gb|EFQ52369.1| type II/IV secretion system protein [Lactobacillus oris PB013-T2-3]
Length = 325
Score = 44.3 bits (103), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 59/120 (49%), Gaps = 12/120 (10%)
Query: 117 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 176
DLL +LF G G GKTT M ++AR ++D Q+ V+ ++ EI D P +
Sbjct: 126 DLLKQRGLVLFAGPMGSGKTTTMYQLARQVAD--QQVVMAIEDPVEI----DEP-----S 174
Query: 177 ARRMQVPE-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
++QV E + ++ ++ H P+V I+ EI A A G +++GT H +
Sbjct: 175 FVQLQVNELAGMNYQQLLRLGLRHRPDVFIIGEIRDPETAQMTVQAALSGHLVLGTVHAQ 234
>gi|77406337|ref|ZP_00783400.1| competence protein CglA [Streptococcus agalactiae H36B]
gi|77175042|gb|EAO77848.1| competence protein CglA [Streptococcus agalactiae H36B]
Length = 323
Score = 44.3 bits (103), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 67/138 (48%), Gaps = 23/138 (16%)
Query: 109 SGHIDMVY--DLLHYGKSIL-------FVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVD 158
SGH D+ Y D + K +L F G G GKTT+M ++A S+ F+ K+++ ++
Sbjct: 110 SGHQDLKYWFDNIKQMKEVLGIRGLYLFSGPVGSGKTTLMYQLA---SEVFKNKQIITIE 166
Query: 159 TSNEIGGDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
EI D + ++Q+ E + + +I+ H P+++I+ EI +A A A
Sbjct: 167 DPVEIKNDKML---------QLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARA 217
Query: 218 CRSIAERGVMLIGTAHGE 235
+ GVM T H +
Sbjct: 218 VIRASLTGVMFFSTIHAK 235
>gi|421532800|ref|ZP_15979146.1| competence protein ComGA [Streptococcus agalactiae STIR-CD-17]
gi|403641900|gb|EJZ02807.1| competence protein ComGA [Streptococcus agalactiae STIR-CD-17]
Length = 323
Score = 43.9 bits (102), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 23/138 (16%)
Query: 109 SGHIDMVY--DLLHYGKSIL-------FVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVD 158
SGH D+ Y D + K +L F G G GKTT+M ++A S+ F+ K+++ ++
Sbjct: 110 SGHQDLKYWFDNIKQMKEVLGTRGLYLFSGPVGSGKTTLMYQLA---SEVFKNKQIITIE 166
Query: 159 TSNEIGGDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
EI D + ++Q+ E + + +I+ H P+++I+ EI +A A A
Sbjct: 167 DPVEIKNDKML---------QLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARA 217
Query: 218 CRSIAERGVMLIGTAHGE 235
+ GVM+ T H +
Sbjct: 218 VIRASLTGVMVFSTIHAK 235
>gi|421147451|ref|ZP_15607139.1| competence protein ComGA [Streptococcus agalactiae GB00112]
gi|401685883|gb|EJS81875.1| competence protein ComGA [Streptococcus agalactiae GB00112]
Length = 323
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 23/138 (16%)
Query: 109 SGHIDMVY--DLLHYGKSIL-------FVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVD 158
SGH D+ Y D + K +L F G G GKTT+M ++A S+ F+ K+++ ++
Sbjct: 110 SGHQDLKYWFDNIKQMKEVLCARGLYLFSGPVGSGKTTLMYQLA---SEVFKNKQIITIE 166
Query: 159 TSNEIGGDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
EI D + ++Q+ E + + +I+ H P+++I+ EI +A A A
Sbjct: 167 DPVEIKNDKML---------QLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARA 217
Query: 218 CRSIAERGVMLIGTAHGE 235
+ GVM+ T H +
Sbjct: 218 VIRASLTGVMVFSTIHAK 235
>gi|22536347|ref|NP_687198.1| competence protein CglA [Streptococcus agalactiae 2603V/R]
gi|76787380|ref|YP_328894.1| competence protein ComGA [Streptococcus agalactiae A909]
gi|76798818|ref|ZP_00781030.1| competence protein CglA [Streptococcus agalactiae 18RS21]
gi|77410958|ref|ZP_00787314.1| competence protein CglA [Streptococcus agalactiae CJB111]
gi|406708696|ref|YP_006763422.1| competence protein CglA [Streptococcus agalactiae GD201008-001]
gi|424050183|ref|ZP_17787731.1| competence protein ComGA [Streptococcus agalactiae ZQ0910]
gi|22533172|gb|AAM99070.1|AE014199_6 competence protein CglA [Streptococcus agalactiae 2603V/R]
gi|76562437|gb|ABA45021.1| competence protein ComGA [Streptococcus agalactiae A909]
gi|76585825|gb|EAO62371.1| competence protein CglA [Streptococcus agalactiae 18RS21]
gi|77163013|gb|EAO73968.1| competence protein CglA [Streptococcus agalactiae CJB111]
gi|389648258|gb|EIM69768.1| competence protein ComGA [Streptococcus agalactiae ZQ0910]
gi|406649581|gb|AFS44982.1| competence protein CglA [Streptococcus agalactiae GD201008-001]
Length = 323
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 23/138 (16%)
Query: 109 SGHIDMVY--DLLHYGKSIL-------FVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVD 158
SGH D+ Y D + K +L F G G GKTT+M ++A S+ F+ K+++ ++
Sbjct: 110 SGHQDLKYWFDNIKQMKEVLGIRGLYLFSGPVGSGKTTLMYQLA---SEVFKNKQIITIE 166
Query: 159 TSNEIGGDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
EI D + ++Q+ E + + +I+ H P+++I+ EI +A A A
Sbjct: 167 DPVEIKNDKML---------QLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARA 217
Query: 218 CRSIAERGVMLIGTAHGE 235
+ GVM+ T H +
Sbjct: 218 VIRASLTGVMVFSTIHAK 235
>gi|410593867|ref|YP_006950594.1| Type II/IV secretion system protein [Streptococcus agalactiae
SA20-06]
gi|410517506|gb|AFV71650.1| Type II/IV secretion system protein [Streptococcus agalactiae
SA20-06]
Length = 323
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 23/138 (16%)
Query: 109 SGHIDMVY--DLLHYGKSIL-------FVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVD 158
SGH D+ Y D + K +L F G G GKTT+M ++A S+ F+ K+++ ++
Sbjct: 110 SGHQDLKYWFDNIKQMKEVLGTRGLYLFSGPVGSGKTTLMYQLA---SEVFKNKQIITIE 166
Query: 159 TSNEIGGDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
EI D + ++Q+ E + + +I+ H P+++I+ EI +A A A
Sbjct: 167 DPVEIKNDKML---------QLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARA 217
Query: 218 CRSIAERGVMLIGTAHGE 235
+ GVM+ T H +
Sbjct: 218 VIRASLTGVMVFSTIHAK 235
>gi|124027110|ref|YP_001012430.1| TypeII/TypeIV secretory system protein, ATPase [Hyperthermus
butylicus DSM 5456]
gi|123977804|gb|ABM80085.1| TypeII/TypeIV secretory system protein, ATPase [Hyperthermus
butylicus DSM 5456]
Length = 540
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 71/145 (48%), Gaps = 11/145 (7%)
Query: 102 CRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN 161
R G G M++ + Y + ++ G G GKTT++ +A +L E+ +VV ++ +
Sbjct: 255 IRRGTLDPGVAAMLWAAIQYKQGVIIYGPIGAGKTTLLNALAMLLPPEY--KVVTIEDTP 312
Query: 162 EIGGDGDIPHSAIGTARRMQVP-EPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHA 217
EI IP TA ++ +P +Q+ + VE+ + P+VII+ EI + EA+A
Sbjct: 313 EIS----IPFHDNWTAMHTRLSDQPGVQNITLQAQVESALRMRPDVIILGEIRSR-EAYA 367
Query: 218 CRSIAERGVMLIGTAHGEWLENIIK 242
G I T H E + +I+
Sbjct: 368 FFQALATGHGGITTVHAESADVLIR 392
>gi|339302445|ref|ZP_08651497.1| competence protein ComGA [Streptococcus agalactiae ATCC 13813]
gi|417004282|ref|ZP_11943015.1| competence protein ComGA [Streptococcus agalactiae FSL S3-026]
gi|319744114|gb|EFV96488.1| competence protein ComGA [Streptococcus agalactiae ATCC 13813]
gi|341578081|gb|EGS28478.1| competence protein ComGA [Streptococcus agalactiae FSL S3-026]
Length = 323
Score = 43.9 bits (102), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 68/138 (49%), Gaps = 23/138 (16%)
Query: 109 SGHIDMVY--DLLHYGKSIL-------FVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVD 158
SGH D+ Y D + K +L F G G GKTT+M ++A S+ F+ K+++ ++
Sbjct: 110 SGHQDLKYWFDNIKQMKEVLGARGLYLFSGPVGSGKTTLMYQLA---SEVFKNKQIITIE 166
Query: 159 TSNEIGGDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
EI D + ++Q+ E + + +I+ H P+++I+ EI +A A A
Sbjct: 167 DPVEIKNDKML---------QLQLNEDIGMTYDALIKLSLRHRPDILIIGEIRDQATARA 217
Query: 218 CRSIAERGVMLIGTAHGE 235
+ GVM+ T H +
Sbjct: 218 VIRASLTGVMVFSTIHAK 235
>gi|104773768|ref|YP_618748.1| competence protein ComGA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116513772|ref|YP_812678.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
gi|103422849|emb|CAI97507.1| Putative competence protein ComGA [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|116093087|gb|ABJ58240.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ATCC
BAA-365]
Length = 323
Score = 43.9 bits (102), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 113 DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS 172
D+V DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 123 DLV-DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQ 179
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
AR + + +++A H P+V+I+ EI E AH A G +++ T
Sbjct: 180 VNAGAR--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATV 231
Query: 233 HGE 235
H +
Sbjct: 232 HAK 234
>gi|418035514|ref|ZP_12673971.1| hypothetical protein LDBUL1519_00671 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354690503|gb|EHE90451.1| hypothetical protein LDBUL1519_00671 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 333
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 113 DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS 172
D+V DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 133 DLV-DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQ 189
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
AR + + +++A H P+V+I+ EI E AH A G +++ T
Sbjct: 190 VNAGAR--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATV 241
Query: 233 HGE 235
H +
Sbjct: 242 HAK 244
>gi|385815392|ref|YP_005851783.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325125429|gb|ADY84759.1| Competence protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
Length = 323
Score = 43.5 bits (101), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 56/123 (45%), Gaps = 11/123 (8%)
Query: 113 DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS 172
D+V DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 123 DLV-DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQ 179
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
AR + + +++A H P+V+I+ EI E AH A G +++ T
Sbjct: 180 VNAGAR--------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATV 231
Query: 233 HGE 235
H +
Sbjct: 232 HAK 234
>gi|257439784|ref|ZP_05615539.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii A2-165]
gi|257197804|gb|EEU96088.1| putative stage III sporulation protein AA [Faecalibacterium
prausnitzii A2-165]
Length = 326
Score = 43.5 bits (101), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 57/126 (45%), Gaps = 8/126 (6%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
+L VG PG GKTT++R IAR L + QK + ++D E+ + G A +
Sbjct: 183 MLLVGEPGSGKTTLLRSIARELVRQ-QKILSVIDERREL-----FAGNTHGEALDVLAGL 236
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
P Q M A+ P+VI++DE+G E A GV I T H E P
Sbjct: 237 PKGQAVQM--ALRTLSPQVILLDELGGLDEVTALEQGLFSGVDFIATLHAATPEEATMRP 294
Query: 245 ILSDLI 250
+ L+
Sbjct: 295 QVKYLM 300
>gi|418029142|ref|ZP_12667690.1| hypothetical protein LDBUL1632_00484 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690860|gb|EHE90802.1| hypothetical protein LDBUL1632_00484 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 323
Score = 43.5 bits (101), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 113 DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS 172
D+V DL I+ G G GKTT M E+AR LS K V+ ++ E+ + +
Sbjct: 123 DLV-DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEES-FFQA 178
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
+ T R + + +++A H P+V+I+ EI E AH A G +++ T
Sbjct: 179 QVNTGAR-------ISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATV 231
Query: 233 HGE 235
H +
Sbjct: 232 HAK 234
>gi|220930145|ref|YP_002507054.1| type II secretion system protein E [Clostridium cellulolyticum H10]
gi|220000473|gb|ACL77074.1| type II secretion system protein E [Clostridium cellulolyticum H10]
Length = 503
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A +D + + L YG S+ G GKTTV + + D KR+ ++ S E+
Sbjct: 242 GTATDEMLDFLSECLRYGISVCVAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSREL 299
Query: 164 G----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
DG I +S I T R E ++ ++++ PE+I V E+ + +EA+
Sbjct: 300 ALVRKRDGKIVNSVIHTLTRSSDNEKQNIDQDMLLDMALRFNPEIICVGEMRS-SEAYTA 358
Query: 219 RSIAERGVMLIGTAHGEWLE 238
+ A G ++ T H E
Sbjct: 359 QESARTGHTVLTTIHSNSCE 378
>gi|153956471|ref|YP_001397236.1| hypothetical protein CKL_3888 [Clostridium kluyveri DSM 555]
gi|219856775|ref|YP_002473897.1| hypothetical protein CKR_3432 [Clostridium kluyveri NBRC 12016]
gi|146349329|gb|EDK35865.1| Conserved hypothetical protein [Clostridium kluyveri DSM 555]
gi|219570499|dbj|BAH08483.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 450
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 107 AVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIG- 164
A + +D++ + + YG S+ G GKTTV + + D KR+ ++ S E+
Sbjct: 196 ATAEMLDLLSEFIRYGISVCIAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSRELSL 253
Query: 165 ---GDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHAC 218
DG + +S + T R E L I+ V+ + P++I+V E+ AEA+A
Sbjct: 254 IREKDGRVTNSVVHTLTRNS--ENELYRIEQIDLVDISLRFNPDIIVVGEMRG-AEANAA 310
Query: 219 RSIAERGVMLIGTAHGEWLEN 239
+ +A GV ++ T H E+
Sbjct: 311 QEVARTGVAVVTTIHSNSCES 331
>gi|119872468|ref|YP_930475.1| type II secretion system protein E [Pyrobaculum islandicum DSM
4184]
gi|119673876|gb|ABL88132.1| type II secretion system protein E [Pyrobaculum islandicum DSM
4184]
Length = 342
Score = 43.5 bits (101), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 55/127 (43%), Gaps = 12/127 (9%)
Query: 115 VYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAI 174
+Y L+ GK I+ G PG GKTT + + ++ Q+ V +D ++E D I
Sbjct: 193 IYRLIKEGKHIVITGPPGSGKTTFLVALDDLIPPNLQR--VYIDEADEFDEDPKKNQIKI 250
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+++ SL + +VI + E+ E HA ++ E G+ + T H
Sbjct: 251 RNVDKIKEVYASLNRNI----------DVIFIGELQYENHFHAFKTATEIGIQTLATMHS 300
Query: 235 EWLENII 241
+ + I
Sbjct: 301 TSVNDAI 307
>gi|336396013|ref|ZP_08577412.1| competence protein [Lactobacillus farciminis KCTC 3681]
Length = 322
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 50/201 (24%), Positives = 92/201 (45%), Gaps = 23/201 (11%)
Query: 50 KYLR-STEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAI---RSRKGAIVGLTCRVG 105
YL+ ++ + + E AQ F NR R+SA+ ++R+ ++ L
Sbjct: 57 NYLKFNSGLDISERRRAQKGSFNFMYQNRQ----IFIRVSAVGDFKNRESMVIRLIYPQE 112
Query: 106 RAVSGHIDMVYDLLHYGKS---ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNE 162
++V +LL K +LF G G GKT++M + R LS ++KRV+ ++ E
Sbjct: 113 LVSPISEEIVENLLPIAKQKGMMLFAGPMGSGKTSLMYALTRQLS--YKKRVMCIEDPIE 170
Query: 163 IGGDGDIPHSAIGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
I D + ++QV E + + ++ +I+ H P ++I+ EI A
Sbjct: 171 IVEDSFL---------QLQVNEEAGMTYEELIKTTLRHRPGILIIGEIRDAKTAQQAIRA 221
Query: 222 AERGVMLIGTAHGEWLENIIK 242
A G ++ T HG+ ++I+
Sbjct: 222 AICGYTVMSTIHGKSKYSVIQ 242
>gi|126459667|ref|YP_001055945.1| type II secretion system protein E [Pyrobaculum calidifontis JCM
11548]
gi|126249388|gb|ABO08479.1| type II secretion system protein E [Pyrobaculum calidifontis JCM
11548]
Length = 342
Score = 43.5 bits (101), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/132 (23%), Positives = 59/132 (44%), Gaps = 12/132 (9%)
Query: 111 HIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIP 170
+ +Y + GK ++ G PG GKTT++ I ++ +Q+ V +D ++E D D
Sbjct: 189 QLKTIYAAVKGGKHLVVAGPPGAGKTTLLVAIDELIPPTWQR--VYIDEADEFDEDPD-- 244
Query: 171 HSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 230
+ Q+ + I A N +V+ + E+ E +A ++ E G+
Sbjct: 245 --------KNQIKIADVNKSREIYASLNRNIDVVFIGELQYEDHFNAFKTATEIGLQTFA 296
Query: 231 TAHGEWLENIIK 242
T H +E+ +K
Sbjct: 297 TMHAATIEDALK 308
>gi|281420206|ref|ZP_06251205.1| negative regulator of genetic competence [Prevotella copri DSM
18205]
gi|281405701|gb|EFB36381.1| negative regulator of genetic competence [Prevotella copri DSM
18205]
Length = 892
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 49/188 (26%), Positives = 84/188 (44%), Gaps = 47/188 (25%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDE------FQKRVVIVDTSNEIGGDGDIPHSAIGTARR 179
+ +G PGVGK+ ++ +A++++++ F KR+V +D + + GT R
Sbjct: 281 VLIGEPGVGKSAIVEGLAQLINNQETSPMFFNKRLVSLDLTAIVA----------GTKFR 330
Query: 180 MQVPEPSLQHKVMIEAVENHMPEVII-VDEIGTEAEAHACRSIAERGVMLIGTAHGEW-- 236
Q E + K +I+ +ENH PE+II +DEI T +IG GE
Sbjct: 331 GQFEE---RIKNVIKELENH-PEIIIFIDEIHT----------------MIGAGSGEGSM 370
Query: 237 -LENIIKNPILSDLIGGVDTVTLGD-------EEARARRCQKSILERKAPPTFYFLIEMR 288
NI+K + +I + TL + + A RR QK ++E ++
Sbjct: 371 DAANILKPALARGIIQCIGATTLDEYRKSIEKDGALERRFQKVLVEPTTREETLLILHNI 430
Query: 289 ERHYWVTH 296
++HY H
Sbjct: 431 KQHYEKHH 438
>gi|225375666|ref|ZP_03752887.1| hypothetical protein ROSEINA2194_01291 [Roseburia inulinivorans DSM
16841]
gi|225212523|gb|EEG94877.1| hypothetical protein ROSEINA2194_01291 [Roseburia inulinivorans DSM
16841]
Length = 451
Score = 42.7 bits (99), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A +D + + L YG SI G GKTT+ + + D KR+ ++ S E+
Sbjct: 195 GTATGEMLDFLAECLRYGISICVAGATSSGKTTLAGWLLTTIPD--GKRIFTIENGSREL 252
Query: 164 G----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
DG + +S I T R E ++ ++++ PE+I V E+ + +EA+
Sbjct: 253 ALVREKDGKVTNSVIHTLTRYSENEKQNIDQDMLLDMALRFNPEIICVGEMRS-SEAYTA 311
Query: 219 RSIAERGVMLIGTAHGEWLEN 239
+ A G ++ T H E+
Sbjct: 312 QESARTGHTVLTTIHSNSCES 332
>gi|259502892|ref|ZP_05745794.1| competence protein CglA [Lactobacillus antri DSM 16041]
gi|259169143|gb|EEW53638.1| competence protein CglA [Lactobacillus antri DSM 16041]
Length = 325
Score = 42.7 bits (99), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
ILF G G GKTT M ++AR ++D Q+ V+ ++ EI D P + ++QV E
Sbjct: 134 ILFAGPMGSGKTTTMYQLARQVAD--QRVVMAIEDPVEI----DEP-----SFVQLQVNE 182
Query: 185 -PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+ ++ ++ H P+V I+ EI A A G +++GT H +
Sbjct: 183 LAGMNYQQLLRLGLRHRPDVFIIGEIRDPETAQMTVRAALSGQLVLGTVHAQ 234
>gi|387818104|ref|YP_005678449.1| stage III sporulation protein AA, partial [Clostridium botulinum
H04402 065]
gi|322806146|emb|CBZ03714.1| stage III sporulation protein AA [Clostridium botulinum H04402 065]
Length = 94
Score = 42.7 bits (99), Expect = 0.25, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 31/56 (55%)
Query: 195 AVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPILSDLI 250
A+ + PEVII DEIGT + + GV LI T HG +E+I P+ +++
Sbjct: 2 AIRSMAPEVIICDEIGTYNDVESILIALNSGVSLITTIHGFGVEDIYNRPVFKEIV 57
>gi|240145310|ref|ZP_04743911.1| putative type II/IV secretion system protein [Roseburia
intestinalis L1-82]
gi|257202605|gb|EEV00890.1| putative type II/IV secretion system protein [Roseburia
intestinalis L1-82]
Length = 380
Score = 42.7 bits (99), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 64/141 (45%), Gaps = 9/141 (6%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A +D + + L YG SI G GKTT+ + + D KR+ ++ S E+
Sbjct: 124 GTATGEMLDFLAECLRYGISICVAGATSSGKTTLAGWLLTTIPD--GKRIFTIENGSREL 181
Query: 164 G----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
DG + +S I T R E ++ ++++ PE+I V E+ + +EA+
Sbjct: 182 ALVREKDGKVTNSVIHTLTRYSENEKQNIDQDMLLDMALRFNPEIICVGEMRS-SEAYTA 240
Query: 219 RSIAERGVMLIGTAHGEWLEN 239
+ A G ++ T H E+
Sbjct: 241 QESARTGHTVLTTIHSNSCES 261
>gi|77407934|ref|ZP_00784685.1| competence protein CglA [Streptococcus agalactiae COH1]
gi|77173481|gb|EAO76599.1| competence protein CglA [Streptococcus agalactiae COH1]
Length = 199
Score = 42.4 bits (98), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 32/112 (28%), Positives = 58/112 (51%), Gaps = 14/112 (12%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
LF G G GKTT+M ++A S+ F+ K+++ ++ EI D + ++Q+ E
Sbjct: 12 LFSGPVGSGKTTLMYQLA---SEVFKNKQIITIEDPVEIKNDKML---------QLQLNE 59
Query: 185 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+ + +I+ H P+++I+ EI +A A A + GVM+ T H +
Sbjct: 60 DIGMTYDALIKLSLRHRPDILIIGEIRDQATARAVIRASLTGVMVFSTIHAK 111
>gi|125977992|ref|XP_001353029.1| GA13416 [Drosophila pseudoobscura pseudoobscura]
gi|195172285|ref|XP_002026929.1| GL12737 [Drosophila persimilis]
gi|54641780|gb|EAL30530.1| GA13416 [Drosophila pseudoobscura pseudoobscura]
gi|194112697|gb|EDW34740.1| GL12737 [Drosophila persimilis]
Length = 331
Score = 42.4 bits (98), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 44/71 (61%), Gaps = 3/71 (4%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMI 193
P +HK++I
Sbjct: 109 TLPKGRHKIVI 119
>gi|408411471|ref|ZP_11182629.1| Putative competence protein ComGA [Lactobacillus sp. 66c]
gi|407874386|emb|CCK84435.1| Putative competence protein ComGA [Lactobacillus sp. 66c]
Length = 324
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 52/111 (46%), Gaps = 10/111 (9%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
I+ G G GKTT M E+A+ LS K V+ ++ E+ +G + I P
Sbjct: 135 IITSGPTGSGKTTTMYELAKRLSQT--KMVMTIEDPVEVH-EGSFLQTQIN-------PV 184
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+ + +++A H P+V+I+ EI AH A G +++ T H +
Sbjct: 185 AGISYLSLLKAALRHRPDVLIIGEIRDSETAHLAVDAALSGHLVLATVHAK 235
>gi|195440776|ref|XP_002068216.1| GK10084 [Drosophila willistoni]
gi|194164301|gb|EDW79202.1| GK10084 [Drosophila willistoni]
Length = 333
Score = 42.4 bits (98), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 53 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 110
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 111 TLPKGRHKIVILDEADSMTE 130
>gi|50293687|ref|XP_449255.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528568|emb|CAG62229.1| unnamed protein product [Candida glabrata]
Length = 841
Score = 42.4 bits (98), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 55 TEVSVEELEYAQSAVGE----------FGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRV 104
+E+S EE+++A++ +GE F N+ RI+A +RK ++
Sbjct: 208 SELSTEEIQFAKAQLGEKFRFLTQRTVFTDVNKKQ-----SRIAAPDTRK-------VKI 255
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIG 164
+S + V DL G +I + G G GK+ ++RE+ +VL ++ V V S +
Sbjct: 256 PIILSKEQEAVIDLAEKGHNIFYTGSAGTGKSVLLREMIKVLKKKYGPERVAVTASTGLA 315
Query: 165 G 165
Sbjct: 316 A 316
>gi|431793688|ref|YP_007220593.1| Flp pilus assembly protein, ATPase CpaF [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430783914|gb|AGA69197.1| Flp pilus assembly protein, ATPase CpaF [Desulfitobacterium
dichloroeliminans LMG P-21439]
Length = 487
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 43/170 (25%), Positives = 73/170 (42%), Gaps = 13/170 (7%)
Query: 75 DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVG 134
D G+ ++ ++ RK + R G A + + + L YG SI G G
Sbjct: 205 DEDVGVAASIRIVNPQSMRKEDFI----RGGTATDPMLGFLSECLRYGISICVAGATSSG 260
Query: 135 KTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGDIPHSAIGTARRMQVPEP-SLQ 188
KTT+ + + D KR+ ++ S E+ DG + +S I T RM E ++
Sbjct: 261 KTTLAGWLLTTIPD--NKRIFTIENGSRELALVRQDDGMVCNSVIHTLTRMSENEKQNID 318
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
++++ PE+I V E+ EA+A + A G ++ T H E
Sbjct: 319 QDILLDMALRFNPEIICVGEM-RGPEAYAAQESARTGHTVLTTIHSNSCE 367
>gi|417885137|ref|ZP_12529295.1| type II/IV secretion system protein [Lactobacillus oris F0423]
gi|341596332|gb|EGS38943.1| type II/IV secretion system protein [Lactobacillus oris F0423]
Length = 325
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 56/112 (50%), Gaps = 12/112 (10%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
+LF G G GKTT M ++AR ++D Q+ V+ ++ EI D P + ++QV E
Sbjct: 134 VLFAGPMGSGKTTTMYQLARQVAD--QQVVMAIEDPVEI----DEP-----SFVQLQVNE 182
Query: 185 -PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+ ++ ++ H P+V I+ EI A A G +++GT H +
Sbjct: 183 LAGMNYQQLLRLGLRHRPDVFIIGEIRDPETAQMTIQAALSGHLVLGTVHAQ 234
>gi|444315053|ref|XP_004178184.1| hypothetical protein TBLA_0A08760 [Tetrapisispora blattae CBS 6284]
gi|387511223|emb|CCH58665.1| hypothetical protein TBLA_0A08760 [Tetrapisispora blattae CBS 6284]
Length = 1189
Score = 42.4 bits (98), Expect = 0.35, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR LS EF + V + D + EI G G +P I
Sbjct: 676 GKILCFVGPPGVGKTSIGKSIARSLSREFYRFSVGGLTDVA-EIKGHRRTYIGALPGRII 734
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 735 QAMKKCQTQNP 745
>gi|365157848|ref|ZP_09354093.1| hypothetical protein HMPREF1015_00253 [Bacillus smithii 7_3_47FAA]
gi|363622518|gb|EHL73677.1| hypothetical protein HMPREF1015_00253 [Bacillus smithii 7_3_47FAA]
Length = 359
Score = 42.4 bits (98), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 118 LLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 176
LL Y ++ F G G GKTT + + + F ++V+ ++ E DG +
Sbjct: 132 LLRYSHGLMIFTGPTGSGKTTTLYSLVSHSTRHFNQKVITLEDPVERQNDGWL------- 184
Query: 177 ARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
++QV E + L + ++A+ H P+++IV EI E A A G +++ T H
Sbjct: 185 --QLQVNEKAGLTYSAGLKAILRHDPDIVIVGEIRDEETARITMRAALTGHLVLTTMH 240
>gi|409350672|ref|ZP_11233720.1| Putative competence protein ComGA [Lactobacillus equicursoris CIP
110162]
gi|407877292|emb|CCK85778.1| Putative competence protein ComGA [Lactobacillus equicursoris CIP
110162]
Length = 324
Score = 42.0 bits (97), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 41/170 (24%), Positives = 78/170 (45%), Gaps = 18/170 (10%)
Query: 74 GDNRAGIEGTLH--RISAI---RSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKS---I 125
G + IEG + R+S++ + R+ ++ L + ++ + + DL + + I
Sbjct: 76 GSMKLAIEGKDYWLRLSSLGDYQGRESLVIRLIYALSQSRYFFPEQLEDLARFCQRRGLI 135
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
+ G G GKTT M E+A+ LS K V+ ++ E+ +G + I P
Sbjct: 136 ITSGPTGSGKTTTMYELAKRLSQT--KMVMTIEDPVEVH-EGSFLQTQIN-------PVA 185
Query: 186 SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+ + +++A H P+V+I+ EI AH A G +++ T H +
Sbjct: 186 GISYLSLLKAALRHRPDVLIIGEIRDSETAHLAVDAALSGHLVLATVHAK 235
>gi|17647857|ref|NP_523915.1| replication factor C subunit 4 [Drosophila melanogaster]
gi|1703054|sp|P53034.1|RFC2_DROME RecName: Full=Replication factor C subunit 2; AltName:
Full=Activator 1 40 kDa subunit; Short=A1 40 kDa
subunit; AltName: Full=Activator 1 subunit 2; AltName:
Full=Replication factor C 40 kDa subunit; Short=RF-C 40
kDa subunit; Short=RFC40; AltName: Full=Replication
factor C subunit 4; Short=DmRfc4
gi|639708|gb|AAB60241.1| rfc40 [Drosophila melanogaster]
gi|7292439|gb|AAF47843.1| replication factor C subunit 4 [Drosophila melanogaster]
gi|20151645|gb|AAM11182.1| LD40483p [Drosophila melanogaster]
gi|220944360|gb|ACL84723.1| RfC40-PA [synthetic construct]
gi|220954324|gb|ACL89705.1| RfC40-PA [synthetic construct]
Length = 331
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|194750805|ref|XP_001957720.1| GF23886 [Drosophila ananassae]
gi|190625002|gb|EDV40526.1| GF23886 [Drosophila ananassae]
Length = 331
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|194866271|ref|XP_001971841.1| GG14218 [Drosophila erecta]
gi|190653624|gb|EDV50867.1| GG14218 [Drosophila erecta]
Length = 331
Score = 42.0 bits (97), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|435851879|ref|YP_007313465.1| ATPase, type IV secretory pathway VirB11 component like protein
[Methanomethylovorans hollandica DSM 15978]
gi|433662509|gb|AGB49935.1| ATPase, type IV secretory pathway VirB11 component like protein
[Methanomethylovorans hollandica DSM 15978]
Length = 636
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 44/165 (26%), Positives = 76/165 (46%), Gaps = 18/165 (10%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
KSI+FVG GKTT M ++ + E ++V ++ + E+ P+ G R
Sbjct: 380 SKSIVFVGGTASGKTTAMNAVSLFIQPEM--KIVSIEDTRELNLSH--PNWIPGVTRESF 435
Query: 182 VPEP--SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
E S+Q ++ A PE I+V E+ AEA+ G T H + +++
Sbjct: 436 AGEERGSIQMYELLRASLRQRPEYILVGEVRG-AEAYVLFQAMSTGHTTFSTMHADSVQS 494
Query: 240 II---KNPILS---DLIGGVDTVTLGDE----EARARRCQKSILE 274
++ +NP ++ +I +D V++ + R RRC KS+ E
Sbjct: 495 VVHRLENPPINVPRIMIQALDIVSIQAQVKVNNERVRRC-KSLTE 538
>gi|195337341|ref|XP_002035287.1| GM14011 [Drosophila sechellia]
gi|194128380|gb|EDW50423.1| GM14011 [Drosophila sechellia]
Length = 331
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|195587662|ref|XP_002083580.1| GD13291 [Drosophila simulans]
gi|194195589|gb|EDX09165.1| GD13291 [Drosophila simulans]
Length = 331
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|195491632|ref|XP_002093645.1| GE20646 [Drosophila yakuba]
gi|194179746|gb|EDW93357.1| GE20646 [Drosophila yakuba]
Length = 331
Score = 42.0 bits (97), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D +++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKEAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|398342474|ref|ZP_10527177.1| DNA repair protein RadA [Leptospira inadai serovar Lyme str. 10]
Length = 455
Score = 42.0 bits (97), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 51/97 (52%), Gaps = 16/97 (16%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT-ARRM 180
G +L G PGVGK+T++ EI+R LS++ +K + I G+ S +G A RM
Sbjct: 90 GSLVLIGGEPGVGKSTLILEISRKLSEQGRKLLYI---------SGEESASQVGLRAARM 140
Query: 181 QVPEPS--LQHKVMIEAV----ENHMPEVIIVDEIGT 211
V P+ L + +E V E+ P+++ VD I T
Sbjct: 141 SVLSPNLLLSSETYVENVSAMIEDTEPDLVFVDSIQT 177
>gi|398784300|ref|ZP_10547564.1| replicative DNA helicase [Streptomyces auratus AGR0001]
gi|396995223|gb|EJJ06241.1| replicative DNA helicase [Streptomyces auratus AGR0001]
Length = 492
Score = 42.0 bits (97), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR+G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRQGQMTGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARACS 275
>gi|374629584|ref|ZP_09701969.1| ATPase, PilT family [Methanoplanus limicola DSM 2279]
gi|373907697|gb|EHQ35801.1| ATPase, PilT family [Methanoplanus limicola DSM 2279]
Length = 645
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 59/247 (23%), Positives = 106/247 (42%), Gaps = 48/247 (19%)
Query: 15 LRDRLQNDSKRGQLLEVILD-LGRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFG 73
L++R + +K+G L E L+ L P + Y LR +S+E LE A+ F
Sbjct: 154 LKERAKPVAKKGSLKESTLEILSEDPVSEY-------ELR--RISLEILERAKRDPDGFI 204
Query: 74 GDNRAGIEGTLHRISAIR---SRKGAIVGLTCRVGRAVSG-------HIDMVYDLLHYGK 123
+ GI T+ +I ++R +RK G+ R + H D++ L G+
Sbjct: 205 ELEKRGI--TIVQIGSMRISIARKPFSDGMEINAVRPIVDRKLSDYTHSDIISKRLLDGR 262
Query: 124 S-ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+L VG PG GKTT+ + +A LSD+ + + R +QV
Sbjct: 263 QGMLIVGMPGTGKTTLAQSVAIFLSDK------------------EYSVKTMEAPRDIQV 304
Query: 183 PEPSLQHKVMIEAVENH-------MPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
P+ Q+ + ++EN P+ +I DE+ + + G+ ++G H +
Sbjct: 305 PDEITQYTALDGSMENTGEVMLLIRPDYVIFDELRKSDDFSVFADMRLAGINMVGILHAD 364
Query: 236 WLENIIK 242
+E+ ++
Sbjct: 365 DVEDALQ 371
>gi|330796410|ref|XP_003286260.1| hypothetical protein DICPUDRAFT_30635 [Dictyostelium purpureum]
gi|325083765|gb|EGC37209.1| hypothetical protein DICPUDRAFT_30635 [Dictyostelium purpureum]
Length = 887
Score = 42.0 bits (97), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 43/95 (45%), Gaps = 25/95 (26%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I F+G PG GKT++ + IA+ L EF + V +VD S EI G G +P I
Sbjct: 444 GKIICFIGPPGTGKTSIAKSIAKCLKKEFYRFSVGGLVDES-EIKGHRRTYIGAMPGKII 502
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
+ Q P VI++DEI
Sbjct: 503 QAMKLTQTSNP-----------------VILIDEI 520
>gi|195375032|ref|XP_002046307.1| GJ12823 [Drosophila virilis]
gi|194153465|gb|EDW68649.1| GJ12823 [Drosophila virilis]
Length = 331
Score = 41.6 bits (96), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|195135525|ref|XP_002012183.1| GI16571 [Drosophila mojavensis]
gi|193918447|gb|EDW17314.1| GI16571 [Drosophila mojavensis]
Length = 331
Score = 41.6 bits (96), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|440703533|ref|ZP_20884465.1| replicative DNA helicase [Streptomyces turgidiscabies Car8]
gi|440274915|gb|ELP63394.1| replicative DNA helicase [Streptomyces turgidiscabies Car8]
Length = 491
Score = 41.6 bits (96), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDQLTNGLHPGQMIIIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARACS 275
>gi|290959035|ref|YP_003490217.1| replicative DNA helicase [Streptomyces scabiei 87.22]
gi|260648561|emb|CBG71672.1| putative replicative DNA helicase [Streptomyces scabiei 87.22]
Length = 486
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 208 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDQLTNGLHPGQMIIIAARPAMGKSTLA 262
Query: 140 REIARVLS 147
+ AR S
Sbjct: 263 LDFARACS 270
>gi|195012119|ref|XP_001983484.1| GH15919 [Drosophila grimshawi]
gi|193896966|gb|EDV95832.1| GH15919 [Drosophila grimshawi]
Length = 331
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT ++ +AR+ L D ++ V+ ++ SNE G D+ + I + +V
Sbjct: 51 NIIIAGPPGVGKTTTIQCLARILLGDSYKDAVLELNASNERG--IDVVRNKIKMFAQQKV 108
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 109 TLPRGRHKIVILDEADSMTE 128
>gi|357636533|ref|ZP_09134408.1| type II/IV secretion system protein [Streptococcus macacae NCTC
11558]
gi|357584987|gb|EHJ52190.1| type II/IV secretion system protein [Streptococcus macacae NCTC
11558]
Length = 313
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 67/163 (41%), Gaps = 29/163 (17%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
LF G G GKTT+M +IAR F K+++ ++ EI ++Q+ E
Sbjct: 136 LFSGPVGSGKTTLMYQIAR--EKFFNKQIITIEDPVEIKE---------ANMLQLQLNEN 184
Query: 186 -SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-------- 236
+ + +I+ H P+++I+ EI A A + GV+++ T H +
Sbjct: 185 IGMTYDSLIKLSLRHRPDILIIGEIRDRETARAVIRASLTGVLVMSTVHAKSIPGVYARL 244
Query: 237 ---------LENIIKNPILSDLIGGVDTVTLGDEEARARRCQK 270
LEN + I LI G + ++ + QK
Sbjct: 245 LELGVNPKELENTLGGIIYQRLISGGGVLDFAKDKFQEHSAQK 287
>gi|315640072|ref|ZP_07895197.1| competence protein [Enterococcus italicus DSM 15952]
gi|315484200|gb|EFU74671.1| competence protein [Enterococcus italicus DSM 15952]
Length = 289
Score = 41.6 bits (96), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 63/135 (46%), Gaps = 14/135 (10%)
Query: 108 VSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG 167
V+ + ++VYD+ + LF G G GKTT+M +A+ L + V+ ++ EI
Sbjct: 121 VATYDELVYDVANQNGLFLFSGATGSGKTTLMYHLAKKLGGQ----VITIEDPVEI---- 172
Query: 168 DIPHSAIGTARRMQVPEPSLQ-HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV 226
+ P T ++Q + Q + +I+ H P+++++ EI AHA A G
Sbjct: 173 EEP-----TFLQLQTNDTIGQTYDQLIKLSLRHRPDLLLIGEIRDSLTAHAATRAALTGH 227
Query: 227 MLIGTAHGEWLENII 241
+ T H + E +
Sbjct: 228 QVFATVHAKGQEETV 242
>gi|456387077|gb|EMF52590.1| dnaB protein [Streptomyces bottropensis ATCC 25435]
Length = 486
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 208 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDQLTNGLHPGQMIIIAARPAMGKSTLA 262
Query: 140 REIARVLS 147
+ AR S
Sbjct: 263 LDFARACS 270
>gi|429201615|ref|ZP_19193067.1| replicative DNA helicase [Streptomyces ipomoeae 91-03]
gi|428662807|gb|EKX62211.1| replicative DNA helicase [Streptomyces ipomoeae 91-03]
Length = 489
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDQLTNGLHPGQMIIIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARAAS 274
>gi|222055748|ref|YP_002538110.1| twitching motility protein [Geobacter daltonii FRC-32]
gi|221565037|gb|ACM21009.1| twitching motility protein [Geobacter daltonii FRC-32]
Length = 356
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 33/125 (26%), Positives = 54/125 (43%), Gaps = 33/125 (26%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVD-------TSN-------EIGGDGDIP 170
IL G G GK+T + + R L++ F ++ ++ TS E+G D D
Sbjct: 129 ILVTGPTGNGKSTTLASMLRFLNENFNHNIITIEDPIEFLFTSQKSCIIQREVGIDTDSF 188
Query: 171 HSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 230
+SA+ +A RM P+VI+V E+ + AC AE G +++
Sbjct: 189 NSALKSALRMD-------------------PDVIMVGEMRDKETIDACIKTAETGHLVLS 229
Query: 231 TAHGE 235
T H +
Sbjct: 230 TLHTQ 234
>gi|441142592|ref|ZP_20962460.1| replicative DNA helicase [Streptomyces rimosus subsp. rimosus ATCC
10970]
gi|440622537|gb|ELQ85316.1| replicative DNA helicase [Streptomyces rimosus subsp. rimosus ATCC
10970]
Length = 493
Score = 41.6 bits (96), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR+G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 214 MEGALDEIEAIGSRQGQMTGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 268
Query: 140 REIARVLS 147
+ AR S
Sbjct: 269 LDFARACS 276
>gi|443317662|ref|ZP_21047027.1| pilus retraction protein PilT [Leptolyngbya sp. PCC 6406]
gi|442782739|gb|ELR92714.1| pilus retraction protein PilT [Leptolyngbya sp. PCC 6406]
Length = 361
Score = 41.6 bits (96), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 57/118 (48%), Gaps = 6/118 (5%)
Query: 117 DLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
DL HY K ++ V P G GK+T M + ++ E K +V ++ E + S
Sbjct: 126 DLCHYHKGLILVTGPTGSGKSTTMAAMIDYMNKEMAKHIVTIEDPIEF-----VHTSQKS 180
Query: 176 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
++ +V +L+ + ++A P+VI+V E+ + + A+ G +++GT H
Sbjct: 181 LIKQREVGRHTLKFESALKASLREDPDVILVGEMRDKETVNTALKAAQTGHLVMGTLH 238
>gi|295100821|emb|CBK98366.1| Uncharacterized protein conserved in bacteria [Faecalibacterium
prausnitzii L2-6]
Length = 293
Score = 41.6 bits (96), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 57/120 (47%), Gaps = 7/120 (5%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
+L +G P GKTT++R +AR L+ + + V ++D EI + +A+ +P
Sbjct: 149 MLLMGEPDSGKTTLLRGVARELAKQ-NRAVAVIDERREIFPSEE--SAALPLDILSGIP- 204
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNP 244
+ + + A+ P+VI++DE+G E +A GV I T H E + P
Sbjct: 205 ---KGQAVQMALRTLSPQVILLDELGGMDELYALEQGLFSGVEFIATLHAASWEEAARRP 261
>gi|313123375|ref|YP_004033634.1| type ii secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
gi|312279938|gb|ADQ60657.1| Type II secretory pathway/competence component, ATPase
[Lactobacillus delbrueckii subsp. bulgaricus ND02]
Length = 323
Score = 41.6 bits (96), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 55/123 (44%), Gaps = 11/123 (8%)
Query: 113 DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS 172
D+V DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 123 DLV-DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQ 179
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
A + + +++A H P+V+I+ EI E AH A G +++ T
Sbjct: 180 VNAGA--------GISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATV 231
Query: 233 HGE 235
H +
Sbjct: 232 HAK 234
>gi|428779941|ref|YP_007171727.1| pilus retraction protein PilT [Dactylococcopsis salina PCC 8305]
gi|428694220|gb|AFZ50370.1| pilus retraction protein PilT [Dactylococcopsis salina PCC 8305]
Length = 429
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 55/118 (46%), Gaps = 6/118 (5%)
Query: 117 DLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
D+ HY K ++ V P G GK+T M + ++ E K V+ ++ E + S
Sbjct: 194 DICHYHKGMILVTGPTGSGKSTTMAAMVDYINQEMPKHVITIEDPIEF-----VHQSKKS 248
Query: 176 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
R+ +V +LQ ++A P++I++ E+ + A+ G +++GT H
Sbjct: 249 LIRQREVGMHTLQFDKALKASLREDPDIILIGEMRDRETVNTALKAAQTGHVVMGTLH 306
>gi|323339504|ref|ZP_08079782.1| competence protein ComGA [Lactobacillus ruminis ATCC 25644]
gi|417972857|ref|ZP_12613743.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 25644]
gi|323093073|gb|EFZ35667.1| competence protein ComGA [Lactobacillus ruminis ATCC 25644]
gi|346330774|gb|EGX99007.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 25644]
Length = 328
Score = 41.2 bits (95), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP- 183
IL G G GKTT M E+AR ++D K+++ ++ E I R +QV
Sbjct: 136 ILLSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVE-----------IAEPRFLQVQV 181
Query: 184 --EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ + + +++ H P+V I+ EI E A + A G +++ T H
Sbjct: 182 NEKAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|213402955|ref|XP_002172250.1| lon protease Lon1 [Schizosaccharomyces japonicus yFS275]
gi|212000297|gb|EEB05957.1| lon protease Lon1 [Schizosaccharomyces japonicus yFS275]
Length = 1062
Score = 41.2 bits (95), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 48/102 (47%), Gaps = 25/102 (24%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I VG PGVGKT++ R IAR L+ EF + V + D + EI G G +P I
Sbjct: 560 GKIICLVGPPGVGKTSIGRSIARSLNREFYRFSVGGLTDVA-EIKGHRRTYVGAMPGKVI 618
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
+++Q P +I++DEI ++H
Sbjct: 619 QALKKVQTENP-----------------LILIDEIDKVGKSH 643
>gi|335997578|ref|ZP_08563492.1| competence protein ComGA [Lactobacillus ruminis SPM0211]
gi|335350261|gb|EGM51758.1| competence protein ComGA [Lactobacillus ruminis SPM0211]
Length = 328
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP- 183
IL G G GKTT M E+AR ++D K+++ ++ E I R +QV
Sbjct: 136 ILLSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVE-----------IAEPRFLQVQV 181
Query: 184 --EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ + + +++ H P+V I+ EI E A + A G +++ T H
Sbjct: 182 NEKAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|392958102|ref|ZP_10323620.1| competence protein comGA [Bacillus macauensis ZFHKF-1]
gi|391875885|gb|EIT84487.1| competence protein comGA [Bacillus macauensis ZFHKF-1]
Length = 379
Score = 41.2 bits (95), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 52/119 (43%), Gaps = 10/119 (8%)
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTA 177
LL ILF G G GKTT+M + L F +++V ++ E +
Sbjct: 157 LLRSSGLILFSGPTGSGKTTIMYSLLSQLQQSFSRQIVTLEDPVE---------KKVDLF 207
Query: 178 RRMQVPE-PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+M++ E L + +++ H P+VI++ EI EA A G ++ T H E
Sbjct: 208 LQMEINERAGLTYGSGFKSILRHDPDVIMIGEIRDEATAKLVIRAGLTGHLVFSTLHAE 266
>gi|406036534|ref|ZP_11043898.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Acinetobacter
parvus DSM 16617 = CIP 108168]
Length = 316
Score = 41.2 bits (95), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 56/145 (38%), Gaps = 6/145 (4%)
Query: 42 RYLGEFGGK-YLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGL 100
+Y GGK YL E VE L F I+ T I A+R++ I G
Sbjct: 133 QYDKSGGGKIYLVEDEQDVEALVVEHPHKVAFVTQTTLSIDDTAKVIDALRTKFPKIQGP 192
Query: 101 -TCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT 159
+ A D V DL +L VG P + +RE+A + K +VD
Sbjct: 193 RKDDICYATQNRQDAVRDLAEKCDVVLVVGSPNSSNSNRLRELAERMG----KSAYLVDN 248
Query: 160 SNEIGGDGDIPHSAIGTARRMQVPE 184
++E+ D P S IG PE
Sbjct: 249 ADELEKDWFKPDSKIGVTAGASAPE 273
>gi|345880614|ref|ZP_08832160.1| hypothetical protein HMPREF9431_00824 [Prevotella oulorum F0390]
gi|343922526|gb|EGV33226.1| hypothetical protein HMPREF9431_00824 [Prevotella oulorum F0390]
Length = 731
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 49/105 (46%), Gaps = 10/105 (9%)
Query: 112 IDMVYDLL-HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN--EIGGDGD 168
++ +D + H G S+ G+ G GKTT +R+ E QKR VIV + + G
Sbjct: 8 LNYAWDFVEHTGTSVFLTGKAGTGKTTFLRQFVA----ETQKRFVIVAPTGVAAVNARGV 63
Query: 169 IPHSAIGTARRMQVPEPSLQHKVMIEAVENHM---PEVIIVDEIG 210
HS VP + + K A++ ++ +++I+DEI
Sbjct: 64 TIHSFFQLPFSPYVPHMTYKEKFAFSAIKRNILKTLDLLIIDEIS 108
>gi|149190958|ref|ZP_01869220.1| type II secretion system protein E [Vibrio shilonii AK1]
gi|148835201|gb|EDL52176.1| type II secretion system protein E [Vibrio shilonii AK1]
Length = 340
Score = 41.2 bits (95), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 12/132 (9%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPH 171
+D + + GK+I+ G G GKTT++R +AR + + Q+RVV + + E+ D
Sbjct: 143 LDYLITAIQEGKNIIVSGNTGSGKTTLLRALARYIPE--QERVVTCEDTQELYLDWLPFK 200
Query: 172 SAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGT 231
++ + +R + ++ K +IEA P+ I V EI + A A + I T
Sbjct: 201 VSMESPKR---EDSDVEMKTLIEASLRMRPDRIWVGEIRKASAADAF-------LQAINT 250
Query: 232 AHGEWLENIIKN 243
H + I N
Sbjct: 251 GHSGCMTTIHSN 262
>gi|386773808|ref|ZP_10096186.1| primary replicative DNA helicase [Brachybacterium paraconglomeratum
LC44]
Length = 458
Score = 41.2 bits (95), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
I+ TL+ I A ++R G + G+ +D + LH G+ I+F GRP +GKTT+
Sbjct: 176 IDETLNAIEATQNRGGQVTGVPTGFA-----ELDELTQGLHGGQMIIFAGRPAMGKTTLG 230
Query: 140 REIARVLS 147
++ R S
Sbjct: 231 MDVLRSAS 238
>gi|347525904|ref|YP_004832652.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 27782]
gi|345284863|gb|AEN78716.1| ComG operon protein 1 [Lactobacillus ruminis ATCC 27782]
Length = 328
Score = 41.2 bits (95), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 31/113 (27%), Positives = 52/113 (46%), Gaps = 17/113 (15%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP- 183
IL G G GKTT M E+AR ++D K+++ ++ E I R +QV
Sbjct: 136 ILLSGPMGSGKTTTMYELARKMTD---KQIMCIEDPVE-----------IAEPRFLQVQV 181
Query: 184 --EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ + + +++ H P+V I+ EI E A + A G +++ T H
Sbjct: 182 NEKAKMSYYDLLKVALRHHPDVFIIGEIRDELTAKTAVNAALSGHLVLSTVHA 234
>gi|257067517|ref|YP_003153772.1| primary replicative DNA helicase [Brachybacterium faecium DSM 4810]
gi|256558335|gb|ACU84182.1| primary replicative DNA helicase [Brachybacterium faecium DSM 4810]
Length = 480
Score = 41.2 bits (95), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
I+ TL+ I A ++R G + G+ +D + LH G+ I+F GRP +GKTT+
Sbjct: 198 IDETLNAIEATQNRGGQVTGVPTGFA-----ELDELTQGLHGGQMIIFAGRPAMGKTTLG 252
Query: 140 REIARVLS 147
++ R S
Sbjct: 253 MDVLRSAS 260
>gi|156838346|ref|XP_001642880.1| hypothetical protein Kpol_1007p5 [Vanderwaltozyma polyspora DSM
70294]
gi|156113457|gb|EDO15022.1| hypothetical protein Kpol_1007p5 [Vanderwaltozyma polyspora DSM
70294]
Length = 672
Score = 41.2 bits (95), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 39/71 (54%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 160 GKIICFVGPPGVGKTSIGKSIARSLNRQFTRFSVGGLTDVA-EIKGHRRTYIGALPGRII 218
Query: 175 GTARRMQVPEP 185
+ ++ Q P
Sbjct: 219 QSLKKCQTQNP 229
>gi|423335885|ref|ZP_17313636.1| competence protein [Lactobacillus reuteri ATCC 53608]
gi|337729088|emb|CCC04211.1| competence protein [Lactobacillus reuteri ATCC 53608]
Length = 323
Score = 41.2 bits (95), Expect = 0.77, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
ILF G G GKTT M ++AR L + + V+ ++ EI G I ++QV E
Sbjct: 134 ILFAGPMGAGKTTTMYQLARQLLPK--QIVLTIEDPVEIDHPGFI---------QLQVNE 182
Query: 185 PS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ + ++ +++ H P+V I+ EI A A G +++GT H
Sbjct: 183 LAGMNYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|357412350|ref|YP_004924086.1| replicative DNA helicase [Streptomyces flavogriseus ATCC 33331]
gi|320009719|gb|ADW04569.1| replicative DNA helicase [Streptomyces flavogriseus ATCC 33331]
Length = 491
Score = 40.8 bits (94), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDALTNGLHPGQMIVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARACS 274
>gi|255076393|ref|XP_002501871.1| lon protease [Micromonas sp. RCC299]
gi|226517135|gb|ACO63129.1| lon protease [Micromonas sp. RCC299]
Length = 904
Score = 40.8 bits (94), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQK 152
+ F G PGVGKTT+ R IARVLS FQ+
Sbjct: 412 LCFTGPPGVGKTTLARSIARVLSRPFQR 439
>gi|296141829|ref|YP_003649072.1| replicative DNA helicase [Tsukamurella paurometabola DSM 20162]
gi|296029963|gb|ADG80733.1| replicative DNA helicase [Tsukamurella paurometabola DSM 20162]
Length = 469
Score = 40.8 bits (94), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G +G+ D + + LH G+ I+ GRPG GK+TV
Sbjct: 192 LQPTMDEIDAIASRGGVSMGVPTGFT-----DFDALTNGLHAGQMIIIAGRPGAGKSTVA 246
Query: 140 REIARVLS 147
+I R S
Sbjct: 247 LDILRSCS 254
>gi|408790759|ref|ZP_11202372.1| DNA repair protein RadA [Lactobacillus florum 2F]
gi|408519948|gb|EKK20061.1| DNA repair protein RadA [Lactobacillus florum 2F]
Length = 460
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/110 (26%), Positives = 56/110 (50%), Gaps = 21/110 (19%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIV---DTSNEIGGDGDIPHSAIGTAR 178
G +L G PG+GK+T++ +++ LS + QKRV+ V ++++++ D
Sbjct: 92 GSLVLIGGDPGIGKSTLLLQVSGELS-QLQKRVLYVTGEESADQVKMRAD---------- 140
Query: 179 RMQVPE-------PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
R+Q+P+ P + +A+ + P V+IVD + T E+ +I
Sbjct: 141 RLQIPQNEDLYVFPETDMTAIRDAIADLKPNVVIVDSVQTMQESTVTSAI 190
>gi|352683097|ref|YP_004893621.1| conjugal transfer ATPase [Thermoproteus tenax Kra 1]
gi|350275896|emb|CCC82543.1| trbB Conjugal transfer protein, ATPase [Thermoproteus tenax Kra 1]
Length = 335
Score = 40.8 bits (94), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 30/126 (23%), Positives = 58/126 (46%), Gaps = 12/126 (9%)
Query: 117 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 176
++L+ K+++ G PG GKTT++R I L + +Q+ V +D ++E + I T
Sbjct: 187 NILNKRKNLIVTGPPGSGKTTLLRAIDLDLPEWWQR--VYIDEADEFPDLKNYNQIKINT 244
Query: 177 ARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW 236
+++ SL + ++ I+ E+ A + E G+ + T H +
Sbjct: 245 VDKLKHVFSSLNRNI----------DIFILGELQYPEHFEAFKRAQELGIQTMATMHSDT 294
Query: 237 LENIIK 242
+E IK
Sbjct: 295 IEGAIK 300
>gi|73667120|ref|YP_303136.1| Mg chelatase-like protein [Ehrlichia canis str. Jake]
gi|72394261|gb|AAZ68538.1| Mg chelatase-related protein [Ehrlichia canis str. Jake]
Length = 506
Score = 40.8 bits (94), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 69/160 (43%), Gaps = 18/160 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
G ++L VG PG GK+ + + + +L D K+++ ++T I + ++I T R +
Sbjct: 209 GHNVLMVGPPGTGKSMIAKRLPGILPDLTYKQIIEINTIKSITKKCN---NSISTTRPFR 265
Query: 182 VPEPSLQHKVMIEAVENHMP--------EVIIVDEIG--TEAEAHACRSIAERGVMLIGT 231
P SL M+ +N P ++ +DE+ + + A R E +LI
Sbjct: 266 DPHSSLSIAAMVGGGKNVKPGEITLAHQGILFLDELPEFSRSVLDALRQPLENKEILISR 325
Query: 232 AHGEWLENIIKNPILSDLIGGVDTVTLGDEEARARRCQKS 271
A+ IK P LI ++ G ++ C K+
Sbjct: 326 ANIN-----IKYPANFQLIAAMNPCRCGYFGDSSKACSKA 360
>gi|196013125|ref|XP_002116424.1| hypothetical protein TRIADDRAFT_38259 [Trichoplax adhaerens]
gi|190581015|gb|EDV21094.1| hypothetical protein TRIADDRAFT_38259 [Trichoplax adhaerens]
Length = 943
Score = 40.8 bits (94), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEF 150
+GK I FVG PGVGKT++ + IAR L+ EF
Sbjct: 509 HGKIICFVGPPGVGKTSIGKSIARALNREF 538
>gi|345000891|ref|YP_004803745.1| replicative DNA helicase [Streptomyces sp. SirexAA-E]
gi|344316517|gb|AEN11205.1| replicative DNA helicase [Streptomyces sp. SirexAA-E]
Length = 491
Score = 40.8 bits (94), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARACS 274
>gi|408679406|ref|YP_006879233.1| Replicative DNA helicase [Streptomyces venezuelae ATCC 10712]
gi|328883735|emb|CCA56974.1| Replicative DNA helicase [Streptomyces venezuelae ATCC 10712]
Length = 494
Score = 40.8 bits (94), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 215 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDSLTNGLHPGQMIIIAARPAMGKSTLA 269
Query: 140 REIARVLS 147
+ AR S
Sbjct: 270 LDFARAAS 277
>gi|302543996|ref|ZP_07296338.1| replicative DNA helicase [Streptomyces hygroscopicus ATCC 53653]
gi|302461614|gb|EFL24707.1| replicative DNA helicase [Streptomyces himastatinicus ATCC 53653]
Length = 495
Score = 40.8 bits (94), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 216 MEGALDEIEAIGSRSGQMSGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 270
Query: 140 REIARVLS 147
+ AR S
Sbjct: 271 LDFARACS 278
>gi|374339837|ref|YP_005096573.1| adenylate kinase family protein [Marinitoga piezophila KA3]
gi|372101371|gb|AEX85275.1| adenylate kinase family protein [Marinitoga piezophila KA3]
Length = 219
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 84/217 (38%), Gaps = 51/217 (23%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVP 183
++LF G PG GK T+ +E+++ IPH + G R +V
Sbjct: 5 NLLFFGPPGAGKGTIAKEVSKKYG---------------------IPHISTGDMLRAEVA 43
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI-AERGVMLIG----TAHGEWLE 238
S + E +E ++ DEI E + + E+G +L G E LE
Sbjct: 44 SGSELGNKVKEILEKGQ---LVSDEIMLEVIKNRLQQKDVEKGFILDGFPRTLPQAEGLE 100
Query: 239 NI---IKNPILSDLIGGVDTVTLGDEEARARRCQKSILERKAPPTFYFLIEMRERHYWVT 295
+ IKNPI + L VD T+ R C K Y LI ++ + +
Sbjct: 101 KLLEEIKNPITASLYFEVDVETVVKRITNRRICPKC-------GKIYNLITLKPKVDNIC 153
Query: 296 HKTEKSVDMLLRGKTPLVEIRKRDDRFNVVVDRWKTY 332
+ + I++ DD+ +VV DR+K Y
Sbjct: 154 DECGTQL------------IQRDDDKEDVVRDRYKVY 178
>gi|29830827|ref|NP_825461.1| replicative DNA helicase [Streptomyces avermitilis MA-4680]
gi|29607940|dbj|BAC71996.1| putative replicative DNA helicase [Streptomyces avermitilis
MA-4680]
Length = 491
Score = 40.8 bits (94), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + +H G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDQLTNGMHPGQMIIIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|395771991|ref|ZP_10452506.1| replicative DNA helicase [Streptomyces acidiscabies 84-104]
Length = 496
Score = 40.8 bits (94), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 217 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 271
Query: 140 REIARVLS 147
+ AR S
Sbjct: 272 LDFARAAS 279
>gi|295837788|ref|ZP_06824721.1| replicative DNA helicase [Streptomyces sp. SPB74]
gi|295826670|gb|EFG64971.1| replicative DNA helicase [Streptomyces sp. SPB74]
Length = 515
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ ++ RP +GK+T+
Sbjct: 236 MEGALDEIEAIGSRSGEMTGVPTGFA-----DFDALTNGLHPGQMVVIAARPAMGKSTLA 290
Query: 140 REIARVLS 147
+ AR S
Sbjct: 291 LDFARAAS 298
>gi|227544184|ref|ZP_03974233.1| competence protein ComGA [Lactobacillus reuteri CF48-3A]
gi|338204136|ref|YP_004650281.1| competence protein [Lactobacillus reuteri SD2112]
gi|227185820|gb|EEI65891.1| competence protein ComGA [Lactobacillus reuteri CF48-3A]
gi|336449376|gb|AEI57991.1| competence protein [Lactobacillus reuteri SD2112]
Length = 325
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
ILF G G GKTT M ++AR L + + V+ ++ EI G I ++QV E
Sbjct: 134 ILFAGPMGAGKTTTMYQLARQLLPK--QIVLTIEDPVEIDHPGFI---------QLQVNE 182
Query: 185 PS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ + ++ +++ H P+V I+ EI A A G +++GT H
Sbjct: 183 LAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|194468353|ref|ZP_03074339.1| type II secretion system protein E [Lactobacillus reuteri 100-23]
gi|194453206|gb|EDX42104.1| type II secretion system protein E [Lactobacillus reuteri 100-23]
Length = 325
Score = 40.8 bits (94), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 14/112 (12%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVI-VDTSNEIGGDGDIPHSAIGTARRMQVP 183
ILF G G GKTT M ++AR L K+VV+ ++ EI G I ++Q+
Sbjct: 134 ILFAGPMGAGKTTTMYQLARQL---LPKQVVLTIEDPVEIDHPGFI---------QLQIN 181
Query: 184 EPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
E + + ++ +++ H P+V I+ EI A A G +++GT H
Sbjct: 182 ELAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|307546696|ref|YP_003899175.1| DNA repair protein RadA [Halomonas elongata DSM 2581]
gi|307218720|emb|CBV43990.1| DNA repair protein RadA [Halomonas elongata DSM 2581]
Length = 485
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
G ++L G PG GK+T++ + A L+ Q+RV+ V G+ + A+ A R+Q
Sbjct: 123 GSAVLLGGHPGAGKSTLLLQTACKLAQ--QRRVLYVT------GEESLSQVAM-RAHRLQ 173
Query: 182 VPEPSLQH------KVMIEAVENHMPEVIIVDEIGT 211
+P LQ + ++ E PEV+I+D I T
Sbjct: 174 LPTQGLQMLAETSIETILGVAERERPEVLIIDSIQT 209
>gi|297200907|ref|ZP_06918304.1| replicative DNA helicase [Streptomyces sviceus ATCC 29083]
gi|197716405|gb|EDY60439.1| replicative DNA helicase [Streptomyces sviceus ATCC 29083]
Length = 492
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|148543788|ref|YP_001271158.1| type II secretion system protein E [Lactobacillus reuteri DSM
20016]
gi|184153194|ref|YP_001841535.1| competence protein [Lactobacillus reuteri JCM 1112]
gi|227363232|ref|ZP_03847364.1| competence protein ComGA [Lactobacillus reuteri MM2-3]
gi|325682160|ref|ZP_08161678.1| competence protein ComGA [Lactobacillus reuteri MM4-1A]
gi|148530822|gb|ABQ82821.1| type II secretion system protein E [Lactobacillus reuteri DSM
20016]
gi|183224538|dbj|BAG25055.1| competence protein [Lactobacillus reuteri JCM 1112]
gi|227071688|gb|EEI09979.1| competence protein ComGA [Lactobacillus reuteri MM2-3]
gi|324978804|gb|EGC15753.1| competence protein ComGA [Lactobacillus reuteri MM4-1A]
Length = 325
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 33/111 (29%), Positives = 54/111 (48%), Gaps = 12/111 (10%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
ILF G G GKTT M ++AR L + + V+ ++ EI G I ++QV E
Sbjct: 134 ILFAGPMGAGKTTTMYQLARQLLPK--QIVLTIEDPVEIDHPGFI---------QLQVNE 182
Query: 185 PS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ + ++ +++ H P+V I+ EI A A G +++GT H
Sbjct: 183 LAGMDYESLLKLGLRHRPDVFIIGEIRDSQTAAMSVQAALSGHLVLGTIHA 233
>gi|254573528|ref|XP_002493873.1| ATP-dependent Lon protease, involved in degradation of misfolded
proteins in mitochondria [Komagataella pastoris GS115]
gi|238033672|emb|CAY71694.1| ATP-dependent Lon protease, involved in degradation of misfolded
proteins in mitochondria [Komagataella pastoris GS115]
gi|328354306|emb|CCA40703.1| Lon-like ATP-dependent protease [Komagataella pastoris CBS 7435]
Length = 1106
Score = 40.8 bits (94), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 58/127 (45%), Gaps = 14/127 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GK I FVG PGVGKT++ + IAR L+ +F + V GG D+ S I RR
Sbjct: 584 GKIICFVGPPGVGKTSIGKSIARALNRKFYRFSV--------GGLSDV--SEIKGHRRTY 633
Query: 182 VPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGV---MLIGTAHGEWLE 238
V + ++ E P +I++DEI + H+ +L + +L+
Sbjct: 634 VGAIPGRVVQALKKTETENP-LILIDEIDKISHTHSVNGGDPSSALLELLDPEQNNSFLD 692
Query: 239 NIIKNPI 245
N + PI
Sbjct: 693 NYMDVPI 699
>gi|326204893|ref|ZP_08194746.1| type II secretion system protein E [Clostridium papyrosolvens DSM
2782]
gi|325984942|gb|EGD45785.1| type II secretion system protein E [Clostridium papyrosolvens DSM
2782]
Length = 503
Score = 40.4 bits (93), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 63/140 (45%), Gaps = 9/140 (6%)
Query: 105 GRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEI 163
G A ++ + + L YG S+ G GKTTV + + D KR+ ++ S E+
Sbjct: 242 GTATEEMLNFLSECLRYGISVCVAGATSSGKTTVAGWLLTTIPD--NKRIFTIENGSREL 299
Query: 164 G----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHAC 218
+G I +S I T R E ++ ++++ PE+I V E+ + +EA+
Sbjct: 300 ALVRKKNGKIVNSVIHTLTRSSDNEKQNVDQNMLLDMALRFNPEIICVGEMRS-SEAYTA 358
Query: 219 RSIAERGVMLIGTAHGEWLE 238
+ A G ++ T H E
Sbjct: 359 QESARTGHTVLTTIHSNSCE 378
>gi|318059001|ref|ZP_07977724.1| replicative DNA helicase [Streptomyces sp. SA3_actG]
gi|318075527|ref|ZP_07982859.1| replicative DNA helicase [Streptomyces sp. SA3_actF]
Length = 514
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ ++ RP +GK+T+
Sbjct: 235 MEGALDEIEAIGSRSGEMTGVPTGFA-----DFDALTNGLHPGQMVVIAARPAMGKSTLA 289
Query: 140 REIARVLS 147
+ AR S
Sbjct: 290 LDFARAAS 297
>gi|333025751|ref|ZP_08453815.1| putative replicative DNA helicase [Streptomyces sp. Tu6071]
gi|332745603|gb|EGJ76044.1| putative replicative DNA helicase [Streptomyces sp. Tu6071]
Length = 508
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ ++ RP +GK+T+
Sbjct: 229 MEGALDEIEAIGSRSGEMTGVPTGFA-----DFDALTNGLHPGQMVVIAARPAMGKSTLA 283
Query: 140 REIARVLS 147
+ AR S
Sbjct: 284 LDFARAAS 291
>gi|305664052|ref|YP_003860340.1| type II secretion system protein E [Ignisphaera aggregans DSM
17230]
gi|304378621|gb|ADM28460.1| type II secretion system protein E [Ignisphaera aggregans DSM
17230]
Length = 515
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 64/123 (52%), Gaps = 9/123 (7%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+ I+F G G GKTT++ IA ++ E ++V V+ + EI + + + T R+
Sbjct: 244 QGIIFYGPTGSGKTTLLNAIAMLIPPEL--KIVTVEDTPEI--RLPLHDNWVSTVTRLS- 298
Query: 183 PEPSLQHKVMIEAVENHM---PEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
+P +Q + VE+ M P+++I+ EI + EA++ G + T H E +E+
Sbjct: 299 NDPHIQSITLQTQVESAMRQRPDILILGEIRSR-EAYSFFQAVSTGHGGLTTVHAESVES 357
Query: 240 IIK 242
+IK
Sbjct: 358 LIK 360
>gi|302535604|ref|ZP_07287946.1| replicative DNA helicase [Streptomyces sp. C]
gi|302444499|gb|EFL16315.1| replicative DNA helicase [Streptomyces sp. C]
Length = 493
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 214 MEGALDEIEAIGSRSGQMSGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 268
Query: 140 REIARVLS 147
+ AR S
Sbjct: 269 LDFARACS 276
>gi|170027981|ref|XP_001841875.1| replication factor C subunit 2 [Culex quinquefasciatus]
gi|167868345|gb|EDS31728.1| replication factor C subunit 2 [Culex quinquefasciatus]
Length = 344
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 46/80 (57%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIARVLSDE-FQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT + +AR+L E F++ V+ ++ SNE G D+ + I + +V
Sbjct: 63 NIIIAGPPGVGKTTTILCLARILLGENFREAVLELNASNERG--IDVVRNKIKMFAQQKV 120
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK++I + M E
Sbjct: 121 TLPRGRHKIVILDEADSMTE 140
>gi|291452679|ref|ZP_06592069.1| replicative DNA helicase [Streptomyces albus J1074]
gi|359150796|ref|ZP_09183599.1| replicative DNA helicase [Streptomyces sp. S4]
gi|421740521|ref|ZP_16178771.1| replicative DNA helicase [Streptomyces sp. SM8]
gi|291355628|gb|EFE82530.1| replicative DNA helicase [Streptomyces albus J1074]
gi|406691046|gb|EKC94817.1| replicative DNA helicase [Streptomyces sp. SM8]
Length = 489
Score = 40.4 bits (93), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 7/85 (8%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 210 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 264
Query: 140 REIARVLSDEFQKRVVIVDTSNEIG 164
+ AR S Q + V S E+G
Sbjct: 265 LDFARAAS--IQNNLPSVVFSLEMG 287
>gi|453050377|gb|EME97918.1| replicative DNA helicase [Streptomyces mobaraensis NBRC 13819 = DSM
40847]
Length = 498
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 219 MEGALDEIEAIGSRSGQMSGVPTGFT-----DLDALTNGLHPGQMIVIAARPAMGKSTLA 273
Query: 140 REIARVLS 147
+ AR S
Sbjct: 274 LDFARACS 281
>gi|408530761|emb|CCK28935.1| Replicative DNA helicase [Streptomyces davawensis JCM 4913]
Length = 492
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRTGEMTGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|254384808|ref|ZP_05000145.1| replicative DNA helicase [Streptomyces sp. Mg1]
gi|194343690|gb|EDX24656.1| replicative DNA helicase [Streptomyces sp. Mg1]
Length = 491
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGQMSGVPTGFT-----DLDSLTNGLHPGQMIVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARACS 274
>gi|315605275|ref|ZP_07880321.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
gi|315313092|gb|EFU61163.1| conserved hypothetical protein [Actinomyces sp. oral taxon 180 str.
F0310]
Length = 574
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 69/173 (39%), Gaps = 29/173 (16%)
Query: 92 SRKGA-IVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVL---- 146
S GA + L+ R G +V G + YG+ +L G G GKTT++ IAR
Sbjct: 387 SHPGATCIALSVR-GASVEGRLAPTSFEARYGEHLLVAGPNGSGKTTLLEWIARGAPGGA 445
Query: 147 --SDEFQKRVVIVDTSNEIGGDGDIP----HSAIGTARRMQVPEPSL-----------QH 189
S + VV V GD IP H IG A R VP + Q
Sbjct: 446 HGSIDAAPGVVFVPQVLPRPGDPLIPEDAWHLGIGEAGRGFVPPAAWRRPLGELSAGNQR 505
Query: 190 KVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAE-----RGVMLIGTAHGEWL 237
+ + P V+++DE + A S+ E G ++I T H EWL
Sbjct: 506 RAQLAWAARANPHVLVIDEPTNYLDLDALESLEESMREWEGTLVIST-HDEWL 557
>gi|427421561|ref|ZP_18911744.1| thymidylate kinase [Leptolyngbya sp. PCC 7375]
gi|425757438|gb|EKU98292.1| thymidylate kinase [Leptolyngbya sp. PCC 7375]
Length = 364
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%)
Query: 120 HYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDI 169
YGK I+F G GVGKTT+ ++IA+ L+D +K ++ E G GD+
Sbjct: 22 QYGKLIVFEGPDGVGKTTIAQKIAQCLNDSDEKCKLMAFPGKEPGTLGDL 71
>gi|380301370|ref|ZP_09851063.1| primary replicative DNA helicase [Brachybacterium squillarum M-6-3]
Length = 461
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
I+ TL+ I A ++R G + G+ D + LH G+ I+F GRP +GKTT+
Sbjct: 176 IDETLNTIEATQNRGGQVTGVPTGFA-----EFDDLTQGLHGGQMIIFAGRPAMGKTTLG 230
Query: 140 REIARVLS 147
++ R S
Sbjct: 231 MDVLRSAS 238
>gi|205374026|ref|ZP_03226826.1| required for exogenous DNA-binding (competence) [Bacillus
coahuilensis m4-4]
Length = 357
Score = 40.4 bits (93), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 55/112 (49%), Gaps = 12/112 (10%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIV-DTSNEIGGDGDIPHSAIGTARRMQVP 183
+L+ G G GKTT++ + + SD+ + V+ + D +I D ++QV
Sbjct: 140 LLYSGPTGSGKTTLLYTLVQYCSDQLHRHVITLEDPIEKINED----------FLQIQVN 189
Query: 184 EPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
E + + + ++A+ H P+VI+V EI E AH A G +++ T H
Sbjct: 190 ERAGMTYSNGLKAILRHDPDVIMVGEIRDEETAHIAVRAALSGHLVLSTIHS 241
>gi|55821837|ref|YP_140279.1| late competence protein, ABC transporter subunit [Streptococcus
thermophilus LMG 18311]
gi|55823753|ref|YP_142194.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus CNRZ1066]
gi|55737822|gb|AAV61464.1| late competence protein, ABC transporter subunit [Streptococcus
thermophilus LMG 18311]
gi|55739738|gb|AAV63379.1| late competence protein, ABC transporter subunit [Streptococcus
thermophilus CNRZ1066]
Length = 313
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQAIDMNYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSIAGVYER--LLDL--GVDKSEL 254
>gi|302552662|ref|ZP_07305004.1| replicative DNA helicase [Streptomyces viridochromogenes DSM 40736]
gi|302470280|gb|EFL33373.1| replicative DNA helicase [Streptomyces viridochromogenes DSM 40736]
Length = 492
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARACS 275
>gi|47567804|ref|ZP_00238512.1| general secretion pathway protein E [Bacillus cereus G9241]
gi|47555481|gb|EAL13824.1| general secretion pathway protein E [Bacillus cereus G9241]
Length = 283
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 65/141 (46%), Gaps = 20/141 (14%)
Query: 115 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 173
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 129 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRSDDLL---- 184
Query: 174 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 233 H-----GEWLE----NIIKNP 244
H G L NI+K P
Sbjct: 240 HTNDARGAILHAHQLNILKYP 260
>gi|222097687|ref|YP_002531744.1| comg operon protein 1 [Bacillus cereus Q1]
gi|375286249|ref|YP_005106688.1| comG operon protein 1 [Bacillus cereus NC7401]
gi|221241745|gb|ACM14455.1| comG operon protein 1 [Bacillus cereus Q1]
gi|358354776|dbj|BAL19948.1| comG operon protein 1 [Bacillus cereus NC7401]
Length = 347
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 117 DLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 131 SFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL------ 184
Query: 176 TARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T H
Sbjct: 185 ---QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH 240
>gi|302520482|ref|ZP_07272824.1| replicative DNA helicase [Streptomyces sp. SPB78]
gi|302429377|gb|EFL01193.1| replicative DNA helicase [Streptomyces sp. SPB78]
Length = 496
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ ++ RP +GK+T+
Sbjct: 217 MEGALDEIEAIGSRSGEMTGVPTGFA-----DFDALTNGLHPGQMVVIAARPAMGKSTLA 271
Query: 140 REIARVLS 147
+ AR S
Sbjct: 272 LDFARAAS 279
>gi|254391462|ref|ZP_05006664.1| replicative DNA helicase [Streptomyces clavuligerus ATCC 27064]
gi|326442130|ref|ZP_08216864.1| replicative DNA helicase [Streptomyces clavuligerus ATCC 27064]
gi|197705151|gb|EDY50963.1| replicative DNA helicase [Streptomyces clavuligerus ATCC 27064]
Length = 494
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 215 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 269
Query: 140 REIARVLS 147
+ AR S
Sbjct: 270 LDFARACS 277
>gi|408825586|ref|ZP_11210476.1| replicative DNA helicase [Streptomyces somaliensis DSM 40738]
Length = 502
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 223 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 277
Query: 140 REIARVLS 147
+ AR S
Sbjct: 278 LDFARACS 285
>gi|217961734|ref|YP_002340304.1| comG operon protein 1 [Bacillus cereus AH187]
gi|229140978|ref|ZP_04269522.1| ComG operon protein 1 [Bacillus cereus BDRD-ST26]
gi|229198372|ref|ZP_04325078.1| ComG operon protein 1 [Bacillus cereus m1293]
gi|423354739|ref|ZP_17332364.1| hypothetical protein IAU_02813 [Bacillus cereus IS075]
gi|423373877|ref|ZP_17351216.1| hypothetical protein IC5_02932 [Bacillus cereus AND1407]
gi|423570486|ref|ZP_17546731.1| hypothetical protein II7_03707 [Bacillus cereus MSX-A12]
gi|423574073|ref|ZP_17550192.1| hypothetical protein II9_01294 [Bacillus cereus MSX-D12]
gi|423604103|ref|ZP_17579996.1| hypothetical protein IIK_00684 [Bacillus cereus VD102]
gi|217067422|gb|ACJ81672.1| comG operon protein 1 [Bacillus cereus AH187]
gi|228585072|gb|EEK43184.1| ComG operon protein 1 [Bacillus cereus m1293]
gi|228642554|gb|EEK98841.1| ComG operon protein 1 [Bacillus cereus BDRD-ST26]
gi|401086287|gb|EJP94514.1| hypothetical protein IAU_02813 [Bacillus cereus IS075]
gi|401095278|gb|EJQ03338.1| hypothetical protein IC5_02932 [Bacillus cereus AND1407]
gi|401203682|gb|EJR10517.1| hypothetical protein II7_03707 [Bacillus cereus MSX-A12]
gi|401212642|gb|EJR19385.1| hypothetical protein II9_01294 [Bacillus cereus MSX-D12]
gi|401245789|gb|EJR52142.1| hypothetical protein IIK_00684 [Bacillus cereus VD102]
Length = 348
Score = 40.4 bits (93), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 117 DLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 132 SFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL------ 185
Query: 176 TARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T H
Sbjct: 186 ---QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH 241
>gi|52141254|ref|YP_085575.1| competence protein ComG [Bacillus cereus E33L]
gi|51974723|gb|AAU16273.1| comG operon protein 1 [Bacillus cereus E33L]
Length = 347
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 115 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 173
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 129 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRSDDLL---- 184
Query: 174 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 233 H 233
H
Sbjct: 240 H 240
>gi|418467934|ref|ZP_13038787.1| replicative DNA helicase [Streptomyces coelicoflavus ZG0656]
gi|371551427|gb|EHN78722.1| replicative DNA helicase [Streptomyces coelicoflavus ZG0656]
Length = 492
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|350270772|ref|YP_004882080.1| stage III sporulation protein AA [Oscillibacter valericigenes
Sjm18-20]
gi|348595614|dbj|BAK99574.1| stage III sporulation protein AA [Oscillibacter valericigenes
Sjm18-20]
Length = 301
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 37/141 (26%), Positives = 61/141 (43%), Gaps = 6/141 (4%)
Query: 113 DMVYDLLHYGK--SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIG-GDGDI 169
++ LL G+ S L + PG GKTT++R++ R +S RV + D E+
Sbjct: 138 ELCQRLLSGGEINSTLLLSPPGGGKTTLLRDLIRCVSQR-GFRVGLADERGEVAVCYRGK 196
Query: 170 PHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
P +G + P M+ N P+++ DEI E + A A GV L+
Sbjct: 197 PQMDVGPCTDVLDGCPKAIAIPMLLRTMN--PQIVAADEITAEEDIRAMTMAAGCGVKLL 254
Query: 230 GTAHGEWLENIIKNPILSDLI 250
T H + + P+ + L+
Sbjct: 255 ATVHAANAAELTQKPLYARLL 275
>gi|294813707|ref|ZP_06772350.1| Replicative DNA helicase [Streptomyces clavuligerus ATCC 27064]
gi|294326306|gb|EFG07949.1| Replicative DNA helicase [Streptomyces clavuligerus ATCC 27064]
Length = 497
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 218 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 272
Query: 140 REIARVLS 147
+ AR S
Sbjct: 273 LDFARACS 280
>gi|330718414|ref|ZP_08313014.1| hypothetical protein LfalK3_03223 [Leuconostoc fallax KCTC 3537]
Length = 263
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 55/119 (46%), Gaps = 14/119 (11%)
Query: 119 LHYGKS--ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 176
LH +S LF G G GKTT M + LS +K V+ ++ EI +
Sbjct: 64 LHLPESGLFLFSGPTGSGKTTTMYRLLTCLS--LEKTVLTIEDPVEIQQSNFV------- 114
Query: 177 ARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
++QV E + + + +I+ H PEV+++ EI + A A A G +++ T H
Sbjct: 115 --QLQVNETAGMYYDDLIKVALRHRPEVLLIGEIRDKETAEAAIKAALSGHLVVSTIHA 171
>gi|206978000|ref|ZP_03238886.1| comG operon protein 1 [Bacillus cereus H3081.97]
gi|206743800|gb|EDZ55221.1| comG operon protein 1 [Bacillus cereus H3081.97]
Length = 348
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 117 DLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 132 SFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL------ 185
Query: 176 TARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T H
Sbjct: 186 ---QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH 241
>gi|403172897|ref|XP_003332028.2| ATP-dependent protease La [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375170043|gb|EFP87609.2| ATP-dependent protease La [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1188
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + VG PGVGKT++ + IAR L +F + V + D + EI G G +P I
Sbjct: 636 GKILCLVGPPGVGKTSIGKSIARALDRQFFRFSVGGLTDVA-EIKGHRRTYVGAMPGKVI 694
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ +++Q P +I++DEI + H + ML +
Sbjct: 695 QSLKKVQTENP-----------------LILIDEIDKVGKGHNGDPSSALLEMLDPEQNS 737
Query: 235 EWLENIIKNPI 245
+L++ I PI
Sbjct: 738 SFLDHYIDIPI 748
>gi|229163189|ref|ZP_04291144.1| ComG operon protein 1 [Bacillus cereus R309803]
gi|228620252|gb|EEK77123.1| ComG operon protein 1 [Bacillus cereus R309803]
Length = 348
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/124 (25%), Positives = 59/124 (47%), Gaps = 11/124 (8%)
Query: 112 IDMVYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIP 170
+ + LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 127 VKKLLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDLL- 185
Query: 171 HSAIGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++
Sbjct: 186 --------QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVM 237
Query: 230 GTAH 233
T H
Sbjct: 238 TTLH 241
>gi|375129118|ref|YP_004991213.1| replicative DNA helicase [Pseudonocardia dioxanivorans CB1190]
gi|326955333|gb|AEA29026.1| replicative DNA helicase [Pseudonocardia dioxanivorans CB1190]
Length = 458
Score = 40.0 bits (92), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 83 TLHRISAIRSRKGAIVGLTCRVGRAVSGHIDM--VYDLLHYGKSILFVGRPGVGKTTVMR 140
T+ I AI +R G +G+ +G+ D+ + + LH G+ I+ RPGVGK+TV
Sbjct: 182 TMDEIDAIAARGGMALGVP-------TGYTDLDAITNGLHPGQMIVVAARPGVGKSTVGL 234
Query: 141 EIARVLS 147
+IAR S
Sbjct: 235 DIARSCS 241
>gi|329938671|ref|ZP_08288067.1| replicative DNA helicase [Streptomyces griseoaurantiacus M045]
gi|329302162|gb|EGG46054.1| replicative DNA helicase [Streptomyces griseoaurantiacus M045]
Length = 492
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|443626070|ref|ZP_21110501.1| putative Replicative DNA helicase [Streptomyces viridochromogenes
Tue57]
gi|443340414|gb|ELS54625.1| putative Replicative DNA helicase [Streptomyces viridochromogenes
Tue57]
Length = 486
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 207 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 261
Query: 140 REIARVLS 147
+ AR S
Sbjct: 262 LDFARAAS 269
>gi|158285610|ref|XP_308395.4| AGAP007477-PA [Anopheles gambiae str. PEST]
gi|157020075|gb|EAA04621.4| AGAP007477-PA [Anopheles gambiae str. PEST]
Length = 341
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT + +AR+ L F++ V+ ++ SNE G D+ S I + +V
Sbjct: 60 NIIIAGPPGVGKTTTILCLARILLGPNFREAVLELNASNERG--IDVVRSKIKMFAQQKV 117
Query: 183 PEPSLQHKVMI 193
P +HK++I
Sbjct: 118 TLPRGRHKIVI 128
>gi|386841244|ref|YP_006246302.1| replicative DNA helicase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|374101545|gb|AEY90429.1| replicative DNA helicase [Streptomyces hygroscopicus subsp.
jinggangensis 5008]
gi|451794538|gb|AGF64587.1| replicative DNA helicase [Streptomyces hygroscopicus subsp.
jinggangensis TL01]
Length = 492
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|365983482|ref|XP_003668574.1| hypothetical protein NDAI_0B02960 [Naumovozyma dairenensis CBS 421]
gi|343767341|emb|CCD23331.1| hypothetical protein NDAI_0B02960 [Naumovozyma dairenensis CBS 421]
Length = 1159
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 646 GKIICFVGPPGVGKTSIGKSIARALNRQFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVI 704
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 705 QAMKKCQTQNP 715
>gi|386087466|ref|YP_006003340.1| Late competence protein, ABC transporter subunit [Streptococcus
thermophilus ND03]
gi|312279179|gb|ADQ63836.1| Late competence protein, ABC transporter subunit [Streptococcus
thermophilus ND03]
Length = 313
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQAIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSIAGVYER--LLDL--GVDKSEL 254
>gi|228987492|ref|ZP_04147611.1| ComG operon protein 1 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
gi|228772224|gb|EEM20671.1| ComG operon protein 1 [Bacillus thuringiensis serovar tochigiensis
BGSC 4Y1]
Length = 348
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/121 (26%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 115 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 173
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRSDDLL---- 185
Query: 174 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 233 H 233
H
Sbjct: 241 H 241
>gi|402555621|ref|YP_006596892.1| competence protein ComG [Bacillus cereus FRI-35]
gi|401796831|gb|AFQ10690.1| competence protein ComG [Bacillus cereus FRI-35]
Length = 347
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 57/119 (47%), Gaps = 11/119 (9%)
Query: 117 DLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 131 SFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL------ 184
Query: 176 TARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
++Q+ E + + ++ ++A+ H P+VI+V EI E A + G +++ T H
Sbjct: 185 ---QIQINEKAGITYEAGLKAILRHDPDVILVGEIRDEETAKIAIRASLTGHLVMTTLH 240
>gi|383637377|ref|ZP_09950783.1| replicative DNA helicase [Streptomyces chartreusis NRRL 12338]
Length = 493
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 214 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 268
Query: 140 REIARVLS 147
+ AR S
Sbjct: 269 LDFARAAS 276
>gi|455648262|gb|EMF27142.1| replicative DNA helicase [Streptomyces gancidicus BKS 13-15]
Length = 492
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|294630305|ref|ZP_06708865.1| replicative DNA helicase [Streptomyces sp. e14]
gi|292833638|gb|EFF91987.1| replicative DNA helicase [Streptomyces sp. e14]
Length = 492
Score = 40.0 bits (92), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|411003742|ref|ZP_11380071.1| replicative DNA helicase [Streptomyces globisporus C-1027]
Length = 491
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + +H G+ I+ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDALTNGMHPGQMIVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARAAS 274
>gi|410657919|ref|YP_006910290.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Dehalobacter sp. DCA]
gi|409020274|gb|AFV02305.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Dehalobacter sp. DCA]
Length = 454
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SN 161
R G A +D + + L YG S+ G GKTT+ + + D KR+ ++ S
Sbjct: 197 RGGTATEEMLDFLSECLRYGISVCVAGATSSGKTTLAGWLLTTIPD--SKRIFTIENGSR 254
Query: 162 EIG----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E+ D I +S I T R E ++ +++ PE++ V E+ + +EA+
Sbjct: 255 ELALVRKKDDKIVNSVIHTLTRFSENEKQNIDQDSLLDMALRFNPEIVCVGEMRS-SEAY 313
Query: 217 ACRSIAERGVMLIGTAHGEWLE 238
+ A G ++ T H E
Sbjct: 314 TAQEAARTGHTVLTTIHSNSCE 335
>gi|387910558|ref|YP_006340864.1| Late competence protein, ABC transporter subunit [Streptococcus
thermophilus MN-ZLW-002]
gi|387575493|gb|AFJ84199.1| Late competence protein, ABC transporter subunit [Streptococcus
thermophilus MN-ZLW-002]
Length = 313
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQAIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSIAGVYER--LLDL--GVDKSEL 254
>gi|403164811|ref|XP_003890125.1| lon-like ATP-dependent protease [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165321|gb|EHS62890.1| lon-like ATP-dependent protease [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1189
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + VG PGVGKT++ + IAR L +F + V + D + EI G G +P I
Sbjct: 729 GKILCLVGPPGVGKTSIGKSIARALDRQFFRFSVGGLTDVA-EIKGHRRTYVGAMPGKVI 787
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ +++Q P +I++DEI + H + ML +
Sbjct: 788 QSLKKVQTENP-----------------LILIDEIDKVGKGHNGDPSSALLEMLDPEQNS 830
Query: 235 EWLENIIKNPI 245
+L++ I PI
Sbjct: 831 SFLDHYIDIPI 841
>gi|302559696|ref|ZP_07312038.1| replicative DNA helicase [Streptomyces griseoflavus Tu4000]
gi|302477314|gb|EFL40407.1| replicative DNA helicase [Streptomyces griseoflavus Tu4000]
Length = 492
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|433610185|ref|YP_007042554.1| Replicative DNA helicase [Saccharothrix espanaensis DSM 44229]
gi|407888038|emb|CCH35681.1| Replicative DNA helicase [Saccharothrix espanaensis DSM 44229]
Length = 464
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G+ +G+ +D + + LH G+ I+ RPGVGK+T+
Sbjct: 187 LQPTMDEIDAIASRGGSSLGIPTGFA-----DLDELTNGLHPGQMIIVAARPGVGKSTLG 241
Query: 140 REIARVLS 147
+ AR S
Sbjct: 242 LDFARSCS 249
>gi|239989161|ref|ZP_04709825.1| putative replicative DNA helicase [Streptomyces roseosporus NRRL
11379]
gi|291446168|ref|ZP_06585558.1| replicative DNA helicase [Streptomyces roseosporus NRRL 15998]
gi|291349115|gb|EFE76019.1| replicative DNA helicase [Streptomyces roseosporus NRRL 15998]
Length = 491
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + +H G+ I+ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDALTNGMHPGQMIVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARAAS 274
>gi|182437462|ref|YP_001825181.1| replicative DNA helicase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|326778117|ref|ZP_08237382.1| replicative DNA helicase [Streptomyces griseus XylebKG-1]
gi|178465978|dbj|BAG20498.1| putative replicative DNA helicase [Streptomyces griseus subsp.
griseus NBRC 13350]
gi|326658450|gb|EGE43296.1| replicative DNA helicase [Streptomyces griseus XylebKG-1]
Length = 491
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + +H G+ I+ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDALTNGMHPGQMIVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARAAS 274
>gi|448457032|ref|ZP_21595606.1| type II secretion system protein E [Halorubrum lipolyticum DSM
21995]
gi|445811119|gb|EMA61129.1| type II secretion system protein E [Halorubrum lipolyticum DSM
21995]
Length = 774
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIGGDGDIP 170
+ +++ L + ++LF G GVGKTT+M + F R V +D S E+ +P
Sbjct: 471 VTLLWLLYEHRGTVLFAGPTGVGKTTLMNAHTPFIP--FDDRPVSIDEGSREV----RLP 524
Query: 171 HSAIGTARRMQVPEPSLQHKVMIE--AVENHM-PEVIIVDEIGTEAEAHACRSIAERGVM 227
H G + + E + + M E A N++ P+V ++ EI T A G
Sbjct: 525 HE-TGVSLTTRDHEDAYKAVSMSELMAEANYLNPDVEVIAEINTPASFETFAETLNTGHG 583
Query: 228 LIGTAHGEWLENIIKNPI 245
+IGT H E +E ++ I
Sbjct: 584 VIGTTHAEDVEALVNRVI 601
>gi|445383084|ref|ZP_21427403.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus MTCC 5460]
gi|445395975|ref|ZP_21429133.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus MTCC 5461]
gi|444748326|gb|ELW73302.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus MTCC 5461]
gi|444748433|gb|ELW73402.1| late competence protein ABC transporter subunit [Streptococcus
thermophilus MTCC 5460]
Length = 313
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQAIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSIAGVYER--LLDL--GVDKSEL 254
>gi|428174860|gb|EKX43753.1| hypothetical protein GUITHDRAFT_140204 [Guillardia theta CCMP2712]
Length = 331
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 8/94 (8%)
Query: 106 RAVSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDT 159
+ V G+ D V L K +L G PG+GKTT + +AR +L D F++ V+ ++
Sbjct: 24 KEVVGNEDAVARLQAIAKDGNMPHLLLTGSPGIGKTTCVLALARELLGDSFKEGVLELNA 83
Query: 160 SNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMI 193
S+E G D+ + I + +V P +HK++I
Sbjct: 84 SDERG--IDVVRNKIKMFAQQKVTLPPGRHKIII 115
>gi|291438552|ref|ZP_06577942.1| replicative DNA helicase [Streptomyces ghanaensis ATCC 14672]
gi|291341447|gb|EFE68403.1| replicative DNA helicase [Streptomyces ghanaensis ATCC 14672]
Length = 491
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARAAS 274
>gi|297193327|ref|ZP_06910725.1| replicative DNA helicase [Streptomyces pristinaespiralis ATCC
25486]
gi|197718355|gb|EDY62263.1| replicative DNA helicase [Streptomyces pristinaespiralis ATCC
25486]
Length = 492
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 213 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 267
Query: 140 REIARVLS 147
+ AR S
Sbjct: 268 LDFARAAS 275
>gi|296394017|ref|YP_003658901.1| ATP-dependent chaperone ClpB [Segniliparus rotundus DSM 44985]
gi|296181164|gb|ADG98070.1| ATP-dependent chaperone ClpB [Segniliparus rotundus DSM 44985]
Length = 852
Score = 40.0 bits (92), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 91/212 (42%), Gaps = 34/212 (16%)
Query: 17 DRLQNDSKRGQLLEVILDLGRLPEA-----RYLGEFG-----GKYLRSTEVSVEEL-EYA 65
DR + D G+ E L GR+PEA R G G G+ + EV +++ E
Sbjct: 487 DRAERDGDLGRAAE--LRYGRIPEAERELARLTGANGADGANGQVMLKEEVGPDDIAEVV 544
Query: 66 QSAVGEFGGDNRAGIEGTLHRISA-----IRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH 120
S G G G L R+ + S+K AI ++ V RA +G V DL
Sbjct: 545 SSWTGVPAGRMMEGESAKLLRMEQELGKRVVSQKKAIRAVSDAVRRARAG----VADLNR 600
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 180
S LF+G GVGKT + + +A L D+ ++ ++ +D S HS AR M
Sbjct: 601 PTGSFLFLGPTGVGKTELAKALAEFLFDD-ERAIIRIDMSEYAE-----KHS---VARLM 651
Query: 181 QVPEPSL---QHKVMIEAVENHMPEVIIVDEI 209
P + Q + EAV V++ DE+
Sbjct: 652 GAPPGYVGYDQGGQLTEAVRRRPYSVVLFDEV 683
>gi|315652424|ref|ZP_07905412.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
gi|315485323|gb|EFU75717.1| conserved hypothetical protein [Lachnoanaerobaculum saburreum DSM
3986]
Length = 341
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
KSI+F G GVGKT + IA+VL D + VI ++ E+ T ++ +
Sbjct: 200 KSIVFSGSTGVGKTYLSNCIAKVLLDRYYS--VIYLSAKEL----------FETLVKVNI 247
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E S + K ++ A E + +++I+D++G+E H
Sbjct: 248 -EKSEEQKYLLLAKEVYECDMLIIDDLGSELFNH 280
>gi|365864726|ref|ZP_09404405.1| putative replicative DNA helicase [Streptomyces sp. W007]
gi|364005766|gb|EHM26827.1| putative replicative DNA helicase [Streptomyces sp. W007]
Length = 485
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + +H G+ I+ RP +GK+T+
Sbjct: 206 MEGALDEIEAIGSRSGEMTGVPTGFT-----DLDALTNGMHPGQMIVIAARPAMGKSTLA 260
Query: 140 REIARVLS 147
+ AR S
Sbjct: 261 LDFARAAS 268
>gi|410660962|ref|YP_006913333.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Dehalobacter sp. CF]
gi|409023318|gb|AFV05348.1| Type II/IV secretion system ATP hydrolase TadA/VirB11/CpaF, TadA
subfamily [Dehalobacter sp. CF]
Length = 454
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/142 (25%), Positives = 62/142 (43%), Gaps = 9/142 (6%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SN 161
R G A +D + + L YG S+ G GKTT+ + + D KR+ ++ S
Sbjct: 197 RGGTATEEMLDFLSECLRYGISVCVAGATSSGKTTLAGWLLTTIPD--SKRIFTIENGSR 254
Query: 162 EIG----GDGDIPHSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E+ D I +S I T R E ++ +++ PE++ V E+ + +EA+
Sbjct: 255 ELALVRKKDDKIVNSVIHTLTRFSENEKQNIDQDSLLDMALRFNPEIVCVGEMRS-SEAY 313
Query: 217 ACRSIAERGVMLIGTAHGEWLE 238
+ A G ++ T H E
Sbjct: 314 TAQEAARTGHTVLTTIHSNSCE 335
>gi|345016418|ref|YP_004818772.1| replicative DNA helicase [Streptomyces violaceusniger Tu 4113]
gi|344042767|gb|AEM88492.1| replicative DNA helicase [Streptomyces violaceusniger Tu 4113]
Length = 493
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ ++ RP +GK+T+
Sbjct: 214 MEGALDEIEAIGSRSGQMSGVPTGFT-----DLDSLTNGLHPGQMVVIAARPAMGKSTLA 268
Query: 140 REIARVLS 147
+ AR S
Sbjct: 269 LDFARACS 276
>gi|390597061|gb|EIN06461.1| AAA-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 1043
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 48/197 (24%), Positives = 76/197 (38%), Gaps = 62/197 (31%)
Query: 102 CRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN 161
CR AV G +V+ + +L G+ G GKT++ + IAR L D++
Sbjct: 432 CRTKFAVHGMDSVVFGV----PGLLITGKSGSGKTSIAQAIARSLQDQYAY--------- 478
Query: 162 EIGGDGDIPHSAIGTARRMQVPEPSLQH--KVMIEAVENHMPEVIIVD------------ 207
H + +R + P +LQ K + H P V+++D
Sbjct: 479 ---------HHYVDASRHAEKPVGALQKLFKYWHDKALWHRPSVLVLDNIDKLLSAELEH 529
Query: 208 ---------------EIGTEAEAHACRSIAERGVMLIGTAHGEWLENIIKNPIL--SDLI 250
E G+ A H SI RG++LI TA ++ +P+L + L
Sbjct: 530 TDSFRDRHVAELFLSEFGSAARPH---SINNRGIVLIATAES----SVALHPVLGTAHLF 582
Query: 251 GGVDTVTLGDEEARARR 267
G +T+ L ARR
Sbjct: 583 G--ETINLKPPNKEARR 597
>gi|326316500|ref|YP_004234172.1| peptide ABC transporter ATPase [Acidovorax avenae subsp. avenae
ATCC 19860]
gi|323373336|gb|ADX45605.1| oligopeptide/dipeptide ABC transporter, ATPase subunit [Acidovorax
avenae subsp. avenae ATCC 19860]
Length = 631
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 73/161 (45%), Gaps = 21/161 (13%)
Query: 65 AQSAVGEFGGDNR-AGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGK 123
AQ + D R AG++ L R+ + +R GL RV R V + +DL + G+
Sbjct: 305 AQPVLESTPADTRPAGVQPIL-RVKDLVTRFDLRAGLLNRVKRRVHAVERVSFDL-YPGE 362
Query: 124 SILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDG--DIPHSAIGTARR-- 179
++ VG G GK+T R + R++ + + E GG D+P S + RR
Sbjct: 363 TLALVGESGCGKSTTGRSLLRLVESQ--------SGAIEFGGRNILDLPTSEVQALRRDI 414
Query: 180 ---MQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHA 217
Q P SL ++ V + E ++V +IGT EA A
Sbjct: 415 QFIFQDPFASLDPRL---TVGFSIMEPLLVHKIGTREEAQA 452
>gi|423400907|ref|ZP_17378080.1| hypothetical protein ICW_01305 [Bacillus cereus BAG2X1-2]
gi|423478388|ref|ZP_17455103.1| hypothetical protein IEO_03846 [Bacillus cereus BAG6X1-1]
gi|401653897|gb|EJS71440.1| hypothetical protein ICW_01305 [Bacillus cereus BAG2X1-2]
gi|402428550|gb|EJV60647.1| hypothetical protein IEO_03846 [Bacillus cereus BAG6X1-1]
Length = 348
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 115 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 173
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIKKKKTRRIVTLEDPVEKRNDDVL---- 185
Query: 174 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 233 H 233
H
Sbjct: 241 H 241
>gi|354615369|ref|ZP_09033148.1| replicative DNA helicase [Saccharomonospora paurometabolica YIM
90007]
gi|353220282|gb|EHB84741.1| replicative DNA helicase [Saccharomonospora paurometabolica YIM
90007]
Length = 459
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G G+ +D V + LH G+ I+ RPGVGK+T+
Sbjct: 182 LQPTMDEIDAIASRGGTSQGVPTGFA-----DLDEVTNGLHPGQMIIVAARPGVGKSTLG 236
Query: 140 REIARVLS 147
+ AR S
Sbjct: 237 LDFARACS 244
>gi|257057884|ref|YP_003135716.1| primary replicative DNA helicase [Saccharomonospora viridis DSM
43017]
gi|256587756|gb|ACU98889.1| primary replicative DNA helicase [Saccharomonospora viridis DSM
43017]
Length = 459
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G G+ +D V + LH G+ I+ RPGVGK+T+
Sbjct: 182 LQPTMDEIDAIASRGGTAQGIPTGFA-----DLDEVTNGLHPGQMIIIAARPGVGKSTLG 236
Query: 140 REIARVLS 147
+ AR S
Sbjct: 237 LDFARSCS 244
>gi|384568130|ref|ZP_10015234.1| replicative DNA helicase [Saccharomonospora glauca K62]
gi|384523984|gb|EIF01180.1| replicative DNA helicase [Saccharomonospora glauca K62]
Length = 458
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G G+ +D V + LH G+ I+ RPGVGK+T+
Sbjct: 181 LQPTMDEIDAIASRGGTAQGIPTGFA-----DLDEVTNGLHPGQMIIIAARPGVGKSTLG 235
Query: 140 REIARVLS 147
+ AR S
Sbjct: 236 LDFARSCS 243
>gi|374325885|ref|YP_005084085.1| type II secretion system protein E [Pyrobaculum sp. 1860]
gi|356641154|gb|AET31833.1| type II secretion system protein E [Pyrobaculum sp. 1860]
Length = 310
Score = 40.0 bits (92), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 12/133 (9%)
Query: 102 CRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN 161
R G + +Y + G+ I+ G PG GKTT++ + ++ E+Q+ V +D ++
Sbjct: 147 LRSGFLTEDQLREIYRWVREGRHIVVTGPPGSGKTTLLSALDDLIPGEWQR--VYIDEAD 204
Query: 162 EIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
E D I +++ SL + +VI + E+ E A ++
Sbjct: 205 EFEDDPQKNQIKIRNVNKVKEIYASLNRNI----------DVIFIGELQYEEHFAAFKTA 254
Query: 222 AERGVMLIGTAHG 234
E G+ + T H
Sbjct: 255 VEIGLQTLATMHS 267
>gi|336054437|ref|YP_004562724.1| competence protein [Lactobacillus kefiranofaciens ZW3]
gi|333957814|gb|AEG40622.1| Competence protein [Lactobacillus kefiranofaciens ZW3]
Length = 324
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 31/126 (24%), Positives = 62/126 (49%), Gaps = 12/126 (9%)
Query: 111 HIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIP 170
++ + L++Y I+ G G GKTT M E+A+ +S K V+ ++ E+
Sbjct: 121 QLEQIKQLVNYRGLIITSGPTGSGKTTTMYEVAKSISK--NKVVMTIEDPVEV------- 171
Query: 171 HSAIGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
H A + + QV + + ++ +++A H P+++I+ EI + A A G +++
Sbjct: 172 HEA--SFLQSQVNNKAGIDYQSLLKAALRHRPDILIIGEIRDQGTARLAVDAALSGHLVL 229
Query: 230 GTAHGE 235
T H +
Sbjct: 230 ATVHAK 235
>gi|331224424|ref|XP_003324884.1| ATP-dependent protease La [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 757
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 58/131 (44%), Gaps = 25/131 (19%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + VG PGVGKT++ + IAR L +F + V + D + EI G G +P I
Sbjct: 582 GKILCLVGPPGVGKTSIGKSIARALDRQFFRFSVGGLTDVA-EIKGHRRTYVGAMPGKVI 640
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+ +++Q P +I++DEI + H + ML +
Sbjct: 641 QSLKKVQTENP-----------------LILIDEIDKVGKGHNGDPSSALLEMLDPEQNS 683
Query: 235 EWLENIIKNPI 245
+L++ I PI
Sbjct: 684 SFLDHYIDIPI 694
>gi|440291261|gb|ELP84530.1| replication factor C subunit, putative [Entamoeba invadens IP1]
Length = 328
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 63/119 (52%), Gaps = 20/119 (16%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVI 156
+V V G+ D++ L + S +L G+PG+GKTT + +AR +L D++++ V+
Sbjct: 28 KVLEDVVGNKDVIETLKSFRSSKQFPHLLLCGQPGIGKTTSIHCLARELLKDKYKEAVLE 87
Query: 157 VDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEA 215
++ S+E G I T R + + KVM+ +++P+V+I+DE + A
Sbjct: 88 LNASDERG---------IDTIR--TTIKAFCEKKVML---PDNIPKVVILDEADSMTTA 132
>gi|167626658|ref|YP_001677158.1| DNA repair protein RadA [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|167596659|gb|ABZ86657.1| Methylated-DNA--(protein)-cysteine S-methyltransferase [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 456
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 77 RAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKT 136
RAG G++ + +A+ KG R+ +S ++ + G L G PG+GK+
Sbjct: 48 RAGFAGSISKATALADIKGK---EHSRMSTNISEFDRVLGGGIVKGSVTLVGGDPGIGKS 104
Query: 137 TVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--QHKVMIE 194
+++ +I LS QK+V+ V G+ + A+ A R+ +P+ +L + IE
Sbjct: 105 SILLQIMSFLS--LQKKVLYVS------GEESLEQIAL-RAERLNLPKDNLLVMCETNIE 155
Query: 195 AVENHM----PEVIIVDEIGT 211
+ ++M PEV+++D I T
Sbjct: 156 QISSYMIEHKPEVVVIDSIQT 176
>gi|134103767|ref|YP_001109428.1| replicative DNA helicase [Saccharopolyspora erythraea NRRL 2338]
gi|133916390|emb|CAM06503.1| replicative DNA helicase [Saccharopolyspora erythraea NRRL 2338]
Length = 462
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G +G+ +D V + LH G+ I+ RPGVGK+T+
Sbjct: 185 LQPTMDEIDAIASRGGESLGIPTGFT-----DLDAVTNGLHPGQMIIVAARPGVGKSTLG 239
Query: 140 REIARVLS 147
+ AR S
Sbjct: 240 LDFARSAS 247
>gi|419718540|ref|ZP_14245857.1| IstB-like ATP-binding protein [Lachnoanaerobaculum saburreum F0468]
gi|383305375|gb|EIC96743.1| IstB-like ATP-binding protein [Lachnoanaerobaculum saburreum F0468]
Length = 341
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
KSI+F G GVGKT + IA+VL D + VI ++ E+ T ++ +
Sbjct: 200 KSIVFSGSTGVGKTYLSNCIAKVLLDRYYS--VIYLSAKEL----------FETLVKVNI 247
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
E S + K ++ A E + +++I+D++G+E H
Sbjct: 248 -EKSEEQKYLLLAKEVYECDMLIIDDLGSELFNH 280
>gi|300813117|ref|ZP_07093495.1| type II/IV secretion system protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
gi|300495958|gb|EFK31102.1| type II/IV secretion system protein [Lactobacillus delbrueckii
subsp. bulgaricus PB2003/044-T3-4]
Length = 323
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/123 (27%), Positives = 54/123 (43%), Gaps = 11/123 (8%)
Query: 113 DMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHS 172
D+V DL I+ G G GKTT M E+AR LS K V+ ++ E+ +
Sbjct: 123 DLV-DLCWLRGMIVTSGPTGSGKTTTMYELARKLSQ--TKMVMTIEDPVEVYEESFFQAQ 179
Query: 173 AIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
A + + +++A H P+ +I+ EI E AH A G +++ T
Sbjct: 180 VNAGA--------GISYASLLKAALRHRPDALIIGEIRDEETAHLAVDAALSGHLVLATV 231
Query: 233 HGE 235
H +
Sbjct: 232 HAK 234
>gi|291007707|ref|ZP_06565680.1| replicative DNA helicase [Saccharopolyspora erythraea NRRL 2338]
Length = 464
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G +G+ +D V + LH G+ I+ RPGVGK+T+
Sbjct: 187 LQPTMDEIDAIASRGGESLGIPTGFT-----DLDAVTNGLHPGQMIIVAARPGVGKSTLG 241
Query: 140 REIARVLS 147
+ AR S
Sbjct: 242 LDFARSAS 249
>gi|386384901|ref|ZP_10070240.1| replicative DNA helicase [Streptomyces tsukubaensis NRRL18488]
gi|385667635|gb|EIF91039.1| replicative DNA helicase [Streptomyces tsukubaensis NRRL18488]
Length = 498
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ I+ RP +GK+T+
Sbjct: 219 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMIVIAARPAMGKSTLA 273
Query: 140 REIARVLS 147
+ AR S
Sbjct: 274 LDFARAAS 281
>gi|312862399|ref|ZP_07722642.1| type II/IV secretion system protein [Streptococcus vestibularis
F0396]
gi|311102042|gb|EFQ60242.1| type II/IV secretion system protein [Streptococcus vestibularis
F0396]
Length = 640
Score = 39.7 bits (91), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 34/126 (26%), Positives = 61/126 (48%), Gaps = 14/126 (11%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D +
Sbjct: 122 IQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQDNVL- 177
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 178 --------QLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGE 235
T H +
Sbjct: 230 STIHAK 235
>gi|345849319|ref|ZP_08802332.1| replicative DNA helicase [Streptomyces zinciresistens K42]
gi|345639225|gb|EGX60719.1| replicative DNA helicase [Streptomyces zinciresistens K42]
Length = 491
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ +D + + LH G+ ++ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRTGEMTGVPTGFT-----DLDSLTNGLHPGQMVVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARAAS 274
>gi|115399518|ref|XP_001215348.1| DNA repair and recombination protein pif1, mitochondrial precursor
[Aspergillus terreus NIH2624]
gi|114192231|gb|EAU33931.1| DNA repair and recombination protein pif1, mitochondrial precursor
[Aspergillus terreus NIH2624]
Length = 708
Score = 39.7 bits (91), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
++ +GKSI F G G GK+ +MREI + L D+++K
Sbjct: 213 VVQHGKSIFFTGSAGTGKSVLMREIIKKLRDKYRK 247
>gi|403165621|ref|XP_003325595.2| hypothetical protein PGTG_07428 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165801|gb|EFP81176.2| hypothetical protein PGTG_07428 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 647
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 39/68 (57%), Gaps = 8/68 (11%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVI--VDTSNEIGGD-----GDIPHSAIGTA 177
+L VG PGVGKT++ R IA+ L+ +F R+ + V +EI G G +P + +
Sbjct: 177 LLLVGPPGVGKTSIARSIAKALNKQFY-RISLGGVKDESEIRGHRRTYIGSMPGTIVQAL 235
Query: 178 RRMQVPEP 185
RR+ V +P
Sbjct: 236 RRVGVNDP 243
>gi|21674021|ref|NP_662086.1| DNA repair protein RadA [Chlorobium tepidum TLS]
gi|21647169|gb|AAM72428.1| DNA repair protein RadA [Chlorobium tepidum TLS]
Length = 456
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
L +IL G PG+GK+T+M ++ L+ K+V+ V G+ + P+ AR
Sbjct: 86 LMEASAILVGGEPGIGKSTLMLQLVPRLAG---KKVLYV------AGE-ESPNQIRERAR 135
Query: 179 RMQVPEPSLQ--HKVMIE----AVENHMPEVIIVDEIGT 211
R+ + P+L+ +V +E A+ N PE++IVD I T
Sbjct: 136 RLSIKAPNLRLVSEVALERILDAIANEQPEMVIVDSIQT 174
>gi|410726597|ref|ZP_11364834.1| Flp pilus assembly protein, ATPase CpaF [Clostridium sp. Maddingley
MBC34-26]
gi|410600630|gb|EKQ55157.1| Flp pilus assembly protein, ATPase CpaF [Clostridium sp. Maddingley
MBC34-26]
Length = 454
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 37/171 (21%), Positives = 74/171 (43%), Gaps = 14/171 (8%)
Query: 75 DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVG 134
D+ GI ++ ++ + K + + G A +D + L YG S+ G G
Sbjct: 167 DDDKGISASIRIVNPQKLAKENFI----KNGTATEEMLDFLSICLRYGISMCVTGATSSG 222
Query: 135 KTTVMREIARVLSDEFQKRVVIVDTSN------EIGGDGDIPHSAIGTARRM-QVPEPSL 187
KTT+M + + D+ KR+ ++ + +G + ++ + T R + + ++
Sbjct: 223 KTTLMSWLLSTIPDD--KRIFTIENGTREFDLVKTDEEGKVINNIVHTVTRYSEDKKQNI 280
Query: 188 QHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
+ ++E+ P+ I V E+ E E+ A + A G +I T H E
Sbjct: 281 DQEKLLESALTFNPDYICVAEMKGE-ESFAAQEAARTGHAVITTTHANSCE 330
>gi|407796223|ref|ZP_11143179.1| ComG operon protein 1 [Salimicrobium sp. MJ3]
gi|407019577|gb|EKE32293.1| ComG operon protein 1 [Salimicrobium sp. MJ3]
Length = 321
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 53/112 (47%), Gaps = 10/112 (8%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
+LF G G GK+T + + +L+ + +++ ++ E G I ++QV E
Sbjct: 139 VLFTGPTGCGKSTTLYALMEILAQKGHLQLITLEDPVERSVPGVI---------QVQVNE 189
Query: 185 P-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+ + ++A H P++IIV E+ EA AH A G ++ T H +
Sbjct: 190 KNAFDYNEGLKAALRHDPDIIIVGELRDEATAHFAVRAALSGHLVFSTLHAK 241
>gi|423457506|ref|ZP_17434303.1| hypothetical protein IEI_00646 [Bacillus cereus BAG5X2-1]
gi|401147890|gb|EJQ55383.1| hypothetical protein IEI_00646 [Bacillus cereus BAG5X2-1]
Length = 348
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 115 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 173
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL---- 185
Query: 174 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 233 H 233
H
Sbjct: 241 H 241
>gi|307111486|gb|EFN59720.1| hypothetical protein CHLNCDRAFT_133292 [Chlorella variabilis]
Length = 1267
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 75/164 (45%), Gaps = 21/164 (12%)
Query: 88 SAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLS 147
+ +R+ KG + GL GR +D +L G+ L + PG GKTT++R ++ L
Sbjct: 137 TVLRAVKGVLKGLVGASGRRPLRIMDGASGVLRPGRFTLLLAPPGSGKTTLLRALSGRLR 196
Query: 148 DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVD 207
++ V I +G P S+ VPE S + I V+ H PE+ + +
Sbjct: 197 EQADLSV-----GGTILYNGH-PFSSF-------VPERSAAY---ISQVDLHYPELTVRE 240
Query: 208 EIGTEAEAHACRSIA-ERGVMLIGTAHGEWLENIIKNPILSDLI 250
AE C+S + ERGV+L A E L I+ +P L +
Sbjct: 241 AFEFAAE---CQSRSYERGVLLQLAAREEAL-GIVPDPELDAFM 280
>gi|228477980|ref|ZP_04062591.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius SK126]
gi|421453310|ref|ZP_15902666.1| ComG operon protein 1 [Streptococcus salivarius K12]
gi|228250160|gb|EEK09413.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius SK126]
gi|400181619|gb|EJO15886.1| ComG operon protein 1 [Streptococcus salivarius K12]
Length = 313
Score = 39.7 bits (91), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIMDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSVAGVYER--LLDL--GVDKSEL 254
>gi|21222318|ref|NP_628097.1| replicative DNA helicase [Streptomyces coelicolor A3(2)]
gi|289770473|ref|ZP_06529851.1| replicative DNA helicase [Streptomyces lividans TK24]
gi|4808407|emb|CAB42739.1| putative replicative DNA helicase [Streptomyces coelicolor A3(2)]
gi|289700672|gb|EFD68101.1| replicative DNA helicase [Streptomyces lividans TK24]
Length = 491
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 34/68 (50%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+EG L I AI SR G + G+ D + + LH G+ ++ RP +GK+T+
Sbjct: 212 MEGALDEIEAIGSRSGEMTGVPTGFT-----DFDSLTNGLHPGQMVVIAARPAMGKSTLA 266
Query: 140 REIARVLS 147
+ AR S
Sbjct: 267 LDFARAAS 274
>gi|387760448|ref|YP_006067425.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius 57.I]
gi|387784980|ref|YP_006071063.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius JIM8777]
gi|418018752|ref|ZP_12658307.1| late competence protein ComGA [Streptococcus salivarius M18]
gi|338745862|emb|CCB96228.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius JIM8777]
gi|339291215|gb|AEJ52562.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius 57.I]
gi|345526194|gb|EGX29506.1| late competence protein ComGA [Streptococcus salivarius M18]
Length = 313
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIMDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSVAGVYER--LLDL--GVDKSEL 254
>gi|375098295|ref|ZP_09744560.1| replicative DNA helicase [Saccharomonospora marina XMU15]
gi|374659028|gb|EHR53861.1| replicative DNA helicase [Saccharomonospora marina XMU15]
Length = 460
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G G+ +D V + LH G+ I+ RPGVGK+T+
Sbjct: 183 LQPTMDEIDAIASRGGTAQGVPTGFA-----DLDEVTNGLHPGQMIIVAARPGVGKSTLG 237
Query: 140 REIARVLS 147
+ AR S
Sbjct: 238 LDFARSCS 245
>gi|379005716|ref|YP_005261388.1| Type IV secretory pathway VirB11 component [Pyrobaculum oguniense
TE7]
gi|375161169|gb|AFA40781.1| Type IV secretory pathway VirB11 component [Pyrobaculum oguniense
TE7]
Length = 343
Score = 39.7 bits (91), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
L G+ ++ G PG GKTT++ I ++ Q+ V +D ++E D +
Sbjct: 197 LREGRHVVVSGPPGSGKTTLLAAIDDLIPPHLQR--VYIDEADEFEDDPN---------- 244
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
+ Q+ S+ + A N +VI + E+ E A R+ +E G+ + T H +E
Sbjct: 245 KNQIKIRSVNKAKEVLASLNRNIDVIFIGELQYEEHFAAFRTASELGLQTLATMHATSVE 304
Query: 239 NIIK 242
+ K
Sbjct: 305 DAQK 308
>gi|365983044|ref|XP_003668355.1| hypothetical protein NDAI_0B00780 [Naumovozyma dairenensis CBS 421]
gi|343767122|emb|CCD23112.1| hypothetical protein NDAI_0B00780 [Naumovozyma dairenensis CBS 421]
Length = 1348
Score = 39.7 bits (91), Expect = 2.2, Method: Composition-based stats.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+ +LF G PG GKT + R +A S + QK + DI +G A R
Sbjct: 450 RGVLFHGPPGTGKTLMARALAASCSSDSQKITFFMRKG------ADILSKWVGEAER--- 500
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEI 209
Q +++ E + H P +I DEI
Sbjct: 501 -----QLRLLFEEAKKHQPSIIFFDEI 522
>gi|229031892|ref|ZP_04187880.1| ComG operon protein 1 [Bacillus cereus AH1271]
gi|228729510|gb|EEL80499.1| ComG operon protein 1 [Bacillus cereus AH1271]
Length = 348
Score = 39.7 bits (91), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 115 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 173
+ LHY +L F G G GKTT M + V+ + +R+V ++ E D +
Sbjct: 130 LLSFLHYSHGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIVTLEDPVEKRNDDVL---- 185
Query: 174 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 186 -----QIQINEKAGITYEAGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 240
Query: 233 H 233
H
Sbjct: 241 H 241
>gi|357403779|ref|YP_004915703.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylomicrobium alcaliphilum 20Z]
gi|351716444|emb|CCE22104.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase
[Methylomicrobium alcaliphilum 20Z]
Length = 314
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 68/166 (40%), Gaps = 11/166 (6%)
Query: 36 GRLPEARYLGEFGGKYLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKG 95
G + + E GG YL T V +L+ + + T + A+R+R
Sbjct: 129 GTMGQYEKCTENGGIYLVETPEDVAKLKVNNPNNLAYVTQTTLSMTDTKVMVDALRARFS 188
Query: 96 AIVGLTCR-VGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRV 154
+I + A D VYDL + IL VG P + +REIA ++ K
Sbjct: 189 SIQEQKKDDICYATQNRQDAVYDLANKTDLILVVGSPNSSNSNRLREIA----EQLGKPA 244
Query: 155 VIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSLQHKVMIEAVENHM 200
++DT+N++ + +A+G PE V+++ V N +
Sbjct: 245 YLIDTANDMSREWFDGITAVGVTAGASAPE------VLVQEVINQL 284
>gi|320583837|gb|EFW98050.1| mitochondrial Lon protease [Ogataea parapolymorpha DL-1]
Length = 1108
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GK I FVG PGVGKT++ + IAR L+ +F + V GG D+ + I RR
Sbjct: 582 GKIICFVGPPGVGKTSIGKSIARALNRKFYRFSV--------GGLTDV--AEIKGHRRTY 631
Query: 182 VPEPSLQHKVMIEAVENHMPE--VIIVDEIGTEAEAH 216
V M++A++N E ++++DEI + H
Sbjct: 632 V---GAIPGRMVQALKNTETENPLVLIDEIDKISHTH 665
>gi|298707690|emb|CBJ26007.1| Pim1 homolog, ATP-dependent protease [Ectocarpus siliculosus]
Length = 1075
Score = 39.7 bits (91), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 36/127 (28%), Positives = 63/127 (49%), Gaps = 15/127 (11%)
Query: 121 YGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRM 180
+G+ + FVG PGVGKT++ IA+ L EF + +GG D+ + I RR
Sbjct: 540 HGRILCFVGPPGVGKTSIGHSIAKALDREFYRF--------SVGGLRDV--AEIKGHRRT 589
Query: 181 QVPEPSLQHKVM--IEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
V S+ K++ ++ + P V+++DEI A AH + +L + + +L+
Sbjct: 590 YV--GSMPGKLIQCLKVTGTNNP-VVLIDEIDKLARAHDGDPASALLEVLDPSQNSAFLD 646
Query: 239 NIIKNPI 245
N + P+
Sbjct: 647 NYLDVPV 653
>gi|63086953|emb|CAI72282.1| Lon protease, putative [Phytophthora infestans]
Length = 930
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ EF
Sbjct: 458 GKIICFVGPPGVGKTSIGKSIARSLNREF 486
>gi|340399748|ref|YP_004728773.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius CCHSS3]
gi|338743741|emb|CCB94251.1| late competence protein, ABC transporter subunit [Streptococcus
salivarius CCHSS3]
Length = 313
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIMDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSVAGVYER--LLDL--GVDKSEL 254
>gi|345304168|ref|YP_004826070.1| DNA repair protein RadA [Rhodothermus marinus SG0.5JP17-172]
gi|345113401|gb|AEN74233.1| DNA repair protein RadA [Rhodothermus marinus SG0.5JP17-172]
Length = 453
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 47/96 (48%), Gaps = 16/96 (16%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
G IL G PG+GK+T+M E+AR L D +RV+ V + ARR+
Sbjct: 90 GSLILLAGDPGIGKSTLMTELARYLPD---RRVLYVTGEESV-------RQVRLRARRLG 139
Query: 182 VPEPSL------QHKVMIEAVENHMPEVIIVDEIGT 211
V +L + ++EA +P+V++VD I T
Sbjct: 140 VEGDNLLLLAETNLEAILEAARRVVPDVLVVDSIQT 175
>gi|66934628|gb|AAY58903.1| putative LON protease [Hyaloperonospora parasitica]
Length = 725
Score = 39.3 bits (90), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ EF
Sbjct: 456 GKIICFVGPPGVGKTSIGKSIARSLNREF 484
>gi|90962737|ref|YP_536652.1| ATPase [Lactobacillus salivarius UCC118]
gi|385839674|ref|YP_005877421.1| ATPase [Lactobacillus salivarius CECT 5713]
gi|90821931|gb|ABE00569.1| ATPase of the AAA+ class [Lactobacillus salivarius UCC118]
gi|300215370|gb|ADJ79783.1| ATPase of the AAA+ class [Lactobacillus salivarius CECT 5713]
Length = 925
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 24/39 (61%), Gaps = 3/39 (7%)
Query: 117 DLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV 155
D +H LF G PG GKTTV R IA +L +QKRV+
Sbjct: 422 DKIHTSMHSLFFGNPGTGKTTVARIIADIL---YQKRVI 457
>gi|381163795|ref|ZP_09873025.1| replicative DNA helicase [Saccharomonospora azurea NA-128]
gi|418462804|ref|ZP_13033842.1| replicative DNA helicase [Saccharomonospora azurea SZMC 14600]
gi|359735546|gb|EHK84504.1| replicative DNA helicase [Saccharomonospora azurea SZMC 14600]
gi|379255700|gb|EHY89626.1| replicative DNA helicase [Saccharomonospora azurea NA-128]
Length = 884
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G +G+ +D V + LH G+ I+ RPGVGK+T+
Sbjct: 182 LQPTMDEIDAIASRGGVSLGIPTGFT-----DLDEVTNGLHPGQMIIIAARPGVGKSTLG 236
Query: 140 REIARVLS 147
+ AR S
Sbjct: 237 LDFARSCS 244
>gi|301099514|ref|XP_002898848.1| lon protease, putative [Phytophthora infestans T30-4]
gi|262104554|gb|EEY62606.1| lon protease, putative [Phytophthora infestans T30-4]
Length = 807
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ EF
Sbjct: 458 GKIICFVGPPGVGKTSIGKSIARSLNREF 486
>gi|85067857|gb|ABC69312.1| mitochondrial Lon protease [Ogataea angusta]
Length = 1098
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 50/97 (51%), Gaps = 15/97 (15%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GK I FVG PGVGKT++ + IAR L+ +F + V GG D+ + I RR
Sbjct: 577 GKIICFVGPPGVGKTSIGKSIARALNRKFYRFSV--------GGLTDV--AEIKGHRRTY 626
Query: 182 VPEPSLQHKVMIEAVENHMPE--VIIVDEIGTEAEAH 216
V M++A++N E ++++DEI + H
Sbjct: 627 V---GAIPGRMVQALKNTETENPLVLIDEIDKISHTH 660
>gi|428775103|ref|YP_007166890.1| twitching motility protein [Halothece sp. PCC 7418]
gi|428689382|gb|AFZ42676.1| twitching motility protein [Halothece sp. PCC 7418]
Length = 430
Score = 39.3 bits (90), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 56/118 (47%), Gaps = 6/118 (5%)
Query: 117 DLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
D+ HY K ++ V P G GK+T + + ++ E K ++ ++ E + S
Sbjct: 195 DICHYHKGMILVTGPTGSGKSTTLAAMVDYINQEMPKHIITIEDPIEF-----VHQSQRA 249
Query: 176 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
R+ +V +L+ ++A P+VI++ E+ A + A+ G +++GT H
Sbjct: 250 LIRQREVGMHTLEFDHALKASLREDPDVILIGEMRDRATVNTALKAAQTGHVVMGTLH 307
>gi|225017402|ref|ZP_03706594.1| hypothetical protein CLOSTMETH_01328 [Clostridium methylpentosum
DSM 5476]
gi|224949812|gb|EEG31021.1| hypothetical protein CLOSTMETH_01328 [Clostridium methylpentosum
DSM 5476]
Length = 458
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/187 (19%), Positives = 78/187 (41%), Gaps = 31/187 (16%)
Query: 67 SAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSIL 126
+ +G D G+ ++ ++ + + +G G A + +D + ++L +G SI
Sbjct: 160 TVLGNPLTDKEKGVAASIRIVNPKKLSRDDFIGY----GTATAEMLDFLAEVLRFGLSIC 215
Query: 127 FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN------EIGGDGDIPHSAIGTARRM 180
G G GKTT+M I + +E KR+ ++ + +G++ ++ + T R
Sbjct: 216 VTGSTGSGKTTLMSWILSTIPNE--KRIFTIENGCREFDLVKEDAEGNVINNVVHTVTRF 273
Query: 181 Q-VPEPSLQHKVMIEAVENHMPEVIIVDEIG------------------TEAEAHACRSI 221
P+ + + ++E P+++ V E+ T A++C++
Sbjct: 274 SDDPKQNYDQERLLEFALTCNPDIVCVGEMKSAEAFAAQEAARTGHAVITTTHANSCKAT 333
Query: 222 AERGVML 228
R V L
Sbjct: 334 YYRMVTL 340
>gi|348679610|gb|EGZ19426.1| putative lon protease [Phytophthora sojae]
Length = 815
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/29 (62%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ EF
Sbjct: 354 GKIICFVGPPGVGKTSIGKSIARSLNREF 382
>gi|193212788|ref|YP_001998741.1| DNA repair protein RadA [Chlorobaculum parvum NCIB 8327]
gi|193086265|gb|ACF11541.1| DNA repair protein RadA [Chlorobaculum parvum NCIB 8327]
Length = 456
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 53/99 (53%), Gaps = 16/99 (16%)
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
L +IL G PG+GK+T+M ++ L+ K+V+ V G+ + P+ AR
Sbjct: 86 LMEASAILVGGEPGIGKSTLMIQLVPRLAG---KKVLYV------AGE-ESPNQIRERAR 135
Query: 179 RMQVPEPSLQ--HKVMIE----AVENHMPEVIIVDEIGT 211
R+ + P+L+ +V +E A+ N PE++IVD I T
Sbjct: 136 RLSIKAPNLRLVSEVALERILDAIANEQPEMVIVDSIQT 174
>gi|322515921|ref|ZP_08068862.1| competence protein ComGA [Streptococcus vestibularis ATCC 49124]
gi|322125595|gb|EFX96925.1| competence protein ComGA [Streptococcus vestibularis ATCC 49124]
Length = 313
Score = 39.3 bits (90), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQAIDMTYDNLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSVAGVYER--LLDL--GVDKSEL 254
>gi|425054795|ref|ZP_18458297.1| ComG operon protein 1 family protein [Enterococcus faecium 505]
gi|403035104|gb|EJY46509.1| ComG operon protein 1 family protein [Enterococcus faecium 505]
Length = 334
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 79/184 (42%), Gaps = 41/184 (22%)
Query: 79 GIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTV 138
GI TLHR + R I+ T R G +Y LF G G GKT++
Sbjct: 135 GISETLHRCFSSRDF-ATILQKTARRG---------LY---------LFSGPVGSGKTSL 175
Query: 139 MREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PEPSLQHKVMIEAVE 197
M +A L + +++V+ ++ EI + ++Q+ P+ + + +++
Sbjct: 176 MYRLA--LKE--KRQVITIEDPVEIEEPFFL---------QLQINPKIAQTYDTLLKLAL 222
Query: 198 NHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--------KNPILSDL 249
H P+++I+ EI E+ AHA A G + T H LE + K LS+
Sbjct: 223 RHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLIRIHELTKKKEELSEC 282
Query: 250 IGGV 253
+ GV
Sbjct: 283 LAGV 286
>gi|225713814|gb|ACO12753.1| Replication factor C subunit 2 [Lepeophtheirus salmonis]
Length = 325
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 124 SILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT + +AR +L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 45 NIIISGPPGVGKTTTILCLARALLGSSFKEAVLELNASNE--GGIDVVRNKIKMFAQQKV 102
Query: 183 PEPSLQHKVMIEAVENHMPE 202
P +HK+++ + M E
Sbjct: 103 TLPPGRHKIIVLDEADSMTE 122
>gi|116628544|ref|YP_821163.1| ABC transporter [Streptococcus thermophilus LMD-9]
gi|116101821|gb|ABJ66967.1| Type II secretory pathway/competence component, ATPase
[Streptococcus thermophilus LMD-9]
Length = 313
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQVIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSIAGVYER--LLDL--GVDKSEL 254
>gi|366990501|ref|XP_003675018.1| hypothetical protein NCAS_0B05620 [Naumovozyma castellii CBS 4309]
gi|342300882|emb|CCC68646.1| hypothetical protein NCAS_0B05620 [Naumovozyma castellii CBS 4309]
Length = 1120
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 609 GKIICFVGPPGVGKTSIGKSIARALNRQFFRFSVGGMTDVA-EIKGHRRTYIGALPGRII 667
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 668 QALKKCQTQNP 678
>gi|50308831|ref|XP_454420.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74605886|sp|Q6CNR9.1|LONM_KLULA RecName: Full=Lon protease homolog, mitochondrial; Flags: Precursor
gi|49643555|emb|CAG99507.1| KLLA0E10407p [Kluyveromyces lactis]
Length = 1111
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P I
Sbjct: 595 GKIICFVGPPGVGKTSIGKSIARSLNRQFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVI 653
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 654 QALKKCQTQNP 664
>gi|307179094|gb|EFN67566.1| Replication factor C subunit 2 [Camponotus floridanus]
Length = 349
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT + +AR+ L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 71 NIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERG--IDVVRNKIKMFAQKKV 128
Query: 183 PEPSLQHKVMI 193
P +HK++I
Sbjct: 129 NLPKGKHKIII 139
>gi|291551185|emb|CBL27447.1| ATP-dependent protease La [Ruminococcus torques L2-14]
Length = 756
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 114 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEF 150
M + YG +LFVG PG GKT++ + IAR L+ E+
Sbjct: 328 MALNRKQYGSILLFVGAPGTGKTSIGQSIARALNREY 364
>gi|66817990|ref|XP_642688.1| peptidase S16, Lon protease family protein [Dictyostelium
discoideum AX4]
gi|74857001|sp|Q550C8.1|LONM2_DICDI RecName: Full=Lon protease homolog, mitochondrial 2; Flags:
Precursor
gi|60470868|gb|EAL68840.1| peptidase S16, Lon protease family protein [Dictyostelium
discoideum AX4]
Length = 836
Score = 39.3 bits (90), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GK IL VG PG GKT+V + IA L +F + +GG D+ S I RR
Sbjct: 384 GKVILLVGPPGTGKTSVGKSIANALGRQFHRI--------SVGGLSDV--SEIKGHRRTY 433
Query: 182 VPEPSLQHKVM--IEAVENHMPEVIIVDEI 209
V S+ K++ ++ V+ P VI++DEI
Sbjct: 434 V--ASMPGKIIQALKTVKTSNP-VILIDEI 460
>gi|332016496|gb|EGI57389.1| Replication factor C subunit 2 [Acromyrmex echinatior]
Length = 355
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT + +AR+ L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 75 NIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERG--IDVVRNKIKMFAQKKV 132
Query: 183 PEPSLQHKVMI 193
P +HK++I
Sbjct: 133 NLPKGKHKIII 143
>gi|333368106|ref|ZP_08460323.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. 1501(2011)]
gi|332977843|gb|EGK14597.1| 4-hydroxy-3-methylbut-2-enyl diphosphate reductase [Psychrobacter
sp. 1501(2011)]
Length = 318
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 61/149 (40%), Gaps = 6/149 (4%)
Query: 42 RYLGEFGGK-YLRSTEVSVEELEYAQSAVGEFGGDNRAGIEGTLHRISAIRSRKGAIVGL 100
R+ ++GG+ YL E VE+LE + F ++ T I A+R + I G
Sbjct: 133 RFSAQYGGEIYLVENEADVEKLEVSNPDRLAFVTQTTLSMDDTAVVIDALRKKFPNIQGP 192
Query: 101 -TCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT 159
+ A D V DL + +L VG P + +RE+A + R ++D
Sbjct: 193 RKDDICYATQNRQDAVKDLASRCEVVLVVGSPNSSNSNRLRELA----ERMDCRAYLIDN 248
Query: 160 SNEIGGDGDIPHSAIGTARRMQVPEPSLQ 188
+ E+ + A+G PE +Q
Sbjct: 249 AGEMKKEWFDGVEAVGVTAGASAPEILIQ 277
>gi|260822034|ref|XP_002606408.1| hypothetical protein BRAFLDRAFT_67659 [Branchiostoma floridae]
gi|229291749|gb|EEN62418.1| hypothetical protein BRAFLDRAFT_67659 [Branchiostoma floridae]
Length = 997
Score = 39.3 bits (90), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK + F G PGVGKT++ R IAR LS E+
Sbjct: 568 GKILCFYGPPGVGKTSIARSIARALSREY 596
>gi|327298695|ref|XP_003234041.1| ATP-dependent protease La [Trichophyton rubrum CBS 118892]
gi|326464219|gb|EGD89672.1| ATP-dependent protease La [Trichophyton rubrum CBS 118892]
Length = 745
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 237 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 295
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 296 QALKKCQTENP 306
>gi|296271502|ref|YP_003654134.1| replicative DNA helicase [Thermobispora bispora DSM 43833]
gi|296094289|gb|ADG90241.1| replicative DNA helicase [Thermobispora bispora DSM 43833]
Length = 454
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%), Gaps = 5/65 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
+ G L I AI SR G +VG+ +D + + LH G+ I+ RP +GK+T+
Sbjct: 178 MPGALDEIEAISSRNGQLVGVPTGFQ-----DLDALTNGLHPGQMIVIAARPAIGKSTLG 232
Query: 140 REIAR 144
+ AR
Sbjct: 233 LDFAR 237
>gi|386345579|ref|YP_006041743.1| late competence protein, ABC transporter subunit [Streptococcus
thermophilus JIM 8232]
gi|339279040|emb|CCC20788.1| late competence protein, ABC transporter subunit [Streptococcus
thermophilus JIM 8232]
Length = 313
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 70/149 (46%), Gaps = 18/149 (12%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIP 170
I + D L Y LF G G GKTT+M E+ + + F+ ++V+ ++ EI D
Sbjct: 122 IQPIKDALDYRGLYLFAGPVGSGKTTLMHELVQ---ERFKGQQVISIEDPVEIKQD---- 174
Query: 171 HSAIGTARRMQVPEP-SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLI 229
++QV + + + +I+ H P+V+I+ EI + A A + GV ++
Sbjct: 175 -----NVLQLQVNQVIDMTYDSLIKLSLRHRPDVLIIGEIRDKETARAVIRASLTGVTVL 229
Query: 230 GTAHGEWLENIIKNPILSDLIGGVDTVTL 258
T H + + + + L DL GVD L
Sbjct: 230 STIHAKSIAGVYER--LLDL--GVDKSEL 254
>gi|50302983|ref|XP_451429.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49640560|emb|CAH03017.1| KLLA0A09823p [Kluyveromyces lactis]
Length = 1319
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 39/87 (44%), Gaps = 14/87 (16%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+ +LF G PG GKT + R +A S+E +K + DI +G A R
Sbjct: 439 RGVLFHGPPGTGKTLMARALAASCSNEKRKITFFMRKG------ADILSKWVGEAER--- 489
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEI 209
Q +++ E + H P +I DEI
Sbjct: 490 -----QLRLLFEEAKKHQPAIIFFDEI 511
>gi|331700353|ref|YP_004336592.1| replicative DNA helicase [Pseudonocardia dioxanivorans CB1190]
gi|326955042|gb|AEA28739.1| replicative DNA helicase [Pseudonocardia dioxanivorans CB1190]
Length = 469
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G +G+ +D V + LH G+ ++ RPG+GK+T+
Sbjct: 192 LQPTMDEIDAIASRGGVALGVPTGFA-----DLDAVTNGLHPGQMVVVAARPGLGKSTLG 246
Query: 140 REIARVLS 147
+ AR S
Sbjct: 247 LDFARSCS 254
>gi|260821948|ref|XP_002606365.1| hypothetical protein BRAFLDRAFT_67608 [Branchiostoma floridae]
gi|229291706|gb|EEN62375.1| hypothetical protein BRAFLDRAFT_67608 [Branchiostoma floridae]
Length = 853
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/42 (47%), Positives = 29/42 (69%), Gaps = 2/42 (4%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSN 161
G + FVG PGVGKT+V R IA++L EF + + +VD+S+
Sbjct: 370 GPILCFVGPPGVGKTSVGRSIAQILGREFHRISLGGVVDSSD 411
>gi|447913723|ref|YP_007395135.1| Late competence protein ComGA, access of DNA to ComEA [Enterococcus
faecium NRRL B-2354]
gi|445189432|gb|AGE31074.1| Late competence protein ComGA, access of DNA to ComEA [Enterococcus
faecium NRRL B-2354]
Length = 291
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 184
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 241
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 242 -----KNPILSDLIGGV 253
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|145592329|ref|YP_001154331.1| type II secretion system protein E [Pyrobaculum arsenaticum DSM
13514]
gi|145284097|gb|ABP51679.1| type II secretion system protein E [Pyrobaculum arsenaticum DSM
13514]
Length = 343
Score = 39.3 bits (90), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 56/124 (45%), Gaps = 12/124 (9%)
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
L G+ ++ G PG GKTT++ I ++ Q+ V +D ++E D +
Sbjct: 197 LREGRHVVVSGPPGSGKTTLLAAIDDLIPPHLQR--VYIDEADEFEDDPN---------- 244
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
+ Q+ S+ + A N +VI + E+ E A R+ +E G+ + T H +E
Sbjct: 245 KNQIKIRSVNKAKEVLASLNRNIDVIFIGELQYEDHFAAFRTASEMGLQTLATMHATNVE 304
Query: 239 NIIK 242
+ K
Sbjct: 305 DAQK 308
>gi|302383541|ref|YP_003819364.1| ATPase AAA [Brevundimonas subvibrioides ATCC 15264]
gi|302194169|gb|ADL01741.1| ATPase associated with various cellular activities AAA_3
[Brevundimonas subvibrioides ATCC 15264]
Length = 332
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 88 SAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLL---HYGKSILFVGRPGVGKTTVMREIAR 144
S I +R G + L +G+A+ G ++V LL G L G PG+GKT ++R + +
Sbjct: 7 SEIDARLGELSKLKAAIGQAIVGQTEVVEQLLIGLLAGGHCLIEGVPGLGKTLLVRTLGQ 66
Query: 145 VLSDEFQK 152
L+ EF++
Sbjct: 67 ALALEFRR 74
>gi|337754430|ref|YP_004646941.1| DNA repair protein RadA [Francisella sp. TX077308]
gi|336446035|gb|AEI35341.1| DNA repair protein RadA [Francisella sp. TX077308]
Length = 456
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 70/141 (49%), Gaps = 18/141 (12%)
Query: 77 RAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKT 136
R+G G++ + +A+ KG R+ +S ++ + G L G PG+GK+
Sbjct: 48 RSGFAGSISKATALADIKGK---EHSRMSTHISEFDRVLGGGIVKGSVTLVGGEPGIGKS 104
Query: 137 TVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--QHKVMIE 194
+++ +I LS QK+V+ V G+ + A+ A R+ +P+ +L + IE
Sbjct: 105 SILLQIMSFLS--LQKKVLYVS------GEESLEQIAL-RAERLNLPKDNLLVMCETNIE 155
Query: 195 AVENHM----PEVIIVDEIGT 211
+ ++M PEV++VD I T
Sbjct: 156 QIASYMIEHKPEVVVVDSIQT 176
>gi|422845361|ref|ZP_16892071.1| competence protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|325684533|gb|EGD26697.1| competence protein [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 333
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 49/111 (44%), Gaps = 10/111 (9%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
I+ G G GKTT M E+ R LS K V+ ++ E+ + A
Sbjct: 144 IVTSGPTGSGKTTTMYELPRKLSQ--TKMVMTIEDPVEVYEESFFQAQVNAGA------- 194
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGE 235
+ + +++A H P+V+I+ EI E AH A G +++ T H +
Sbjct: 195 -GISYASLLKAALRHRPDVLIIGEIRDEETAHLAVDAALSGHLVLATVHAK 244
>gi|271962612|ref|YP_003336808.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
gi|270505787|gb|ACZ84065.1| ATPase-like protein [Streptosporangium roseum DSM 43021]
Length = 649
Score = 39.3 bits (90), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 39/86 (45%), Gaps = 11/86 (12%)
Query: 104 VGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEI 163
VGR +D V LL + + G GVGKT + +AR L EF V +VD S+
Sbjct: 7 VGRQT--ELDEVSALLSKARHVTLTGTAGVGKTCLALRLARTLESEFPGGVHVVDLSD-- 62
Query: 164 GGDGDIPHSA------IGTARRMQVP 183
GD+ A IG RR VP
Sbjct: 63 -APGDLTSLAGMLADVIGVDRRPGVP 87
>gi|383829606|ref|ZP_09984695.1| replicative DNA helicase [Saccharomonospora xinjiangensis XJ-54]
gi|383462259|gb|EID54349.1| replicative DNA helicase [Saccharomonospora xinjiangensis XJ-54]
Length = 812
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVM 139
++ T+ I AI SR G G+ +D V + LH G+ I+ RPGVGK+T+
Sbjct: 182 LQPTMDEIDAIASRGGTAQGIPTGFT-----DLDEVTNGLHPGQMIIIAARPGVGKSTLG 236
Query: 140 REIARVLS 147
+ AR S
Sbjct: 237 LDFARSCS 244
>gi|327353723|gb|EGE82580.1| ATP-dependent protease La [Ajellomyces dermatitidis ATCC 18188]
Length = 1081
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|239614247|gb|EEQ91234.1| ATP-dependent protease La [Ajellomyces dermatitidis ER-3]
Length = 1081
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|402082814|gb|EJT77832.1| lon protease like protein [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1092
Score = 38.9 bits (89), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 566 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 624
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 625 QALKKCQTENP 635
>gi|261204417|ref|XP_002629422.1| ATP-dependent protease La [Ajellomyces dermatitidis SLH14081]
gi|239587207|gb|EEQ69850.1| ATP-dependent protease La [Ajellomyces dermatitidis SLH14081]
Length = 1081
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|449676249|ref|XP_002157935.2| PREDICTED: caseinolytic peptidase B protein homolog [Hydra
magnipapillata]
Length = 527
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 90 IRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDE 149
I ++GAI ++ + R +G +D + L+ LF+G G+GKT + +++AR L +
Sbjct: 179 IVGQQGAIQAVSSAIRRRQNGWVDDQHPLV-----FLFLGSSGIGKTELAKQLARFLHKD 233
Query: 150 FQKRVVIVDTS 160
+K + +D S
Sbjct: 234 VEKSFIRLDMS 244
>gi|393238425|gb|EJD45962.1| ATP-dependent protease La [Auricularia delicata TFB-10046 SS5]
Length = 1065
Score = 38.9 bits (89), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 550 GKIICFVGPPGVGKTSIGKSIARALNRQF 578
>gi|160893053|ref|ZP_02073841.1| hypothetical protein CLOL250_00598 [Clostridium sp. L2-50]
gi|156865136|gb|EDO58567.1| shikimate kinase [Clostridium sp. L2-50]
Length = 170
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 65/145 (44%), Gaps = 32/145 (22%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN---------EIGGDG------ 167
K+I+ +G PG GK+T+ +A+VL +F V++ + E G DG
Sbjct: 2 KNIVLIGMPGCGKSTIGVVLAKVLGFDFVDADVLIQKKHGKLLRELIAEYGDDGFLQIEN 61
Query: 168 ------DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSI 221
D+ ++ I T + + ++QH V ++++ E+ E A ++
Sbjct: 62 DVNKEIDLKNTVIATGGSVVYCDEAMQHYV--------KNDIVVYIELPYEVIASRLENV 113
Query: 222 AERGVMLIGTAHGEWLENIIKNPIL 246
RGV+L G+ L+++ K IL
Sbjct: 114 KRRGVVL---KDGQTLKDLYKERIL 135
>gi|342883829|gb|EGU84251.1| hypothetical protein FOXB_05208 [Fusarium oxysporum Fo5176]
Length = 1116
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 600 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRMI 658
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 659 QALKKCQTENP 669
>gi|307209915|gb|EFN86693.1| Replication factor C subunit 2 [Harpegnathos saltator]
Length = 351
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 42/71 (59%), Gaps = 3/71 (4%)
Query: 124 SILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+I+ G PGVGKTT + +AR+ L F++ V+ ++ SNE G D+ + I + +V
Sbjct: 71 NIIIAGPPGVGKTTTILCLARILLGPAFKEAVLELNASNERG--IDVVRNKIKMFAQKKV 128
Query: 183 PEPSLQHKVMI 193
P +HK++I
Sbjct: 129 NLPKGKHKIII 139
>gi|358458972|ref|ZP_09169176.1| AAA ATPase central domain protein [Frankia sp. CN3]
gi|357077781|gb|EHI87236.1| AAA ATPase central domain protein [Frankia sp. CN3]
Length = 650
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 47/96 (48%), Gaps = 19/96 (19%)
Query: 116 YDLLHYGKSILFVGRPGVGKTTVMREIARVLSDE--FQKRVVIVDTSNEIGGDGDIPHSA 173
Y + + ++F G PG GKTTV R AR+L++ Q+ V + +S+ + G+ H+
Sbjct: 45 YKVGFEAQHLVFAGPPGTGKTTVARIFARLLAEMGVVQRAVPVEVSSDSLVGE----HAG 100
Query: 174 IGTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEI 209
GT R ++EA E V+ +DEI
Sbjct: 101 SGTRR-------------LVEAFEKAQGGVLFLDEI 123
>gi|14719366|gb|AAK73158.1| lon proteinase [Paracoccidioides brasiliensis]
Length = 1063
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 561 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYIGALPGRVI 619
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 620 QALKKCQTENP 630
>gi|448337480|ref|ZP_21526557.1| replication factor C small subunit [Natrinema pallidum DSM 3751]
gi|445625386|gb|ELY78746.1| replication factor C small subunit [Natrinema pallidum DSM 3751]
Length = 330
Score = 38.9 bits (89), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 108 VSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSN 161
+ GH D+V L +Y + +LF G G GKTT + IAR V D++Q+ + ++ S+
Sbjct: 31 IKGHTDIVPRLKNYVEQDDLPHLLFAGPAGTGKTTAAKSIAREVYDDDWQENFLELNASD 90
Query: 162 EIGGD 166
+ G D
Sbjct: 91 QRGID 95
>gi|91772319|ref|YP_565011.1| type II secretion system protein E [Methanococcoides burtonii DSM
6242]
gi|91711334|gb|ABE51261.1| type II secretion system protein E [Methanococcoides burtonii DSM
6242]
Length = 654
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 76/167 (45%), Gaps = 22/167 (13%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
+S++F G GKTT M ++ + E ++V ++ + E+ P+ G R
Sbjct: 398 SRSLIFAGGTASGKTTAMNAVSTFIQPEM--KIVSIEDTRELNLAH--PNWIPGVTREAF 453
Query: 182 VPEP--SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLEN 239
E S++ +++A PE I+V E+ AEA+ G T H + +++
Sbjct: 454 GGENKGSIEMYELLKAALRQRPEFILVGEVRG-AEAYVLFQAMSTGHTTFSTMHADSVQS 512
Query: 240 II---KNPILS---------DLIGGVDTVTLGDEEARARRCQKSILE 274
I+ +NP ++ D++ V +GDE R RRC KS+ E
Sbjct: 513 IVHRLENPPINVPRIMIQALDIVAIQAQVKVGDE--RVRRC-KSLTE 556
>gi|408398130|gb|EKJ77264.1| hypothetical protein FPSE_02539 [Fusarium pseudograminearum CS3096]
Length = 1123
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 604 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRMI 662
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 663 QALKKCQTENP 673
>gi|397772266|ref|YP_006539812.1| Replication factor C [Natrinema sp. J7-2]
gi|397681359|gb|AFO55736.1| Replication factor C [Natrinema sp. J7-2]
Length = 360
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 108 VSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSN 161
+ GH D+V L +Y + +LF G G GKTT + IAR V D++Q+ + ++ S+
Sbjct: 61 IKGHTDIVPRLKNYVEQDDLPHLLFAGPAGTGKTTAAKSIAREVYDDDWQENFLELNASD 120
Query: 162 EIGGD 166
+ G D
Sbjct: 121 QRGID 125
>gi|301784761|ref|XP_002927796.1| PREDICTED: lon protease homolog, mitochondrial-like [Ailuropoda
melanoleuca]
Length = 910
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK + F G PGVGKT++ R IAR LS E+
Sbjct: 467 GKILCFYGPPGVGKTSIARSIARALSREY 495
>gi|161507246|ref|YP_001577200.1| competence protein [Lactobacillus helveticus DPC 4571]
gi|260102545|ref|ZP_05752782.1| competence protein [Lactobacillus helveticus DSM 20075]
gi|417020872|ref|ZP_11947366.1| competence protein [Lactobacillus helveticus MTCC 5463]
gi|160348235|gb|ABX26909.1| Competence protein [Lactobacillus helveticus DPC 4571]
gi|260083639|gb|EEW67759.1| competence protein [Lactobacillus helveticus DSM 20075]
gi|328461763|gb|EGF33999.1| competence protein [Lactobacillus helveticus MTCC 5463]
Length = 324
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 67/143 (46%), Gaps = 19/143 (13%)
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
LH G I+ G G GKTT M EIA+ LS K V+ ++ E+ + S +
Sbjct: 130 LHRGL-IVTSGPTGSGKTTTMYEIAKKLSP--NKVVMTIEDPVEVH-EPKFLQSQVNN-- 183
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEW-- 236
+ + ++ +++A H P+++I+ EI + A A G ++ TAH +
Sbjct: 184 -----KAGIDYQSLLKAALRHRPDILIIGEIRDQGTARLAIDAALSGHLVFATAHAKSTL 238
Query: 237 -----LENI-IKNPILSDLIGGV 253
LE++ IKN LS+ + V
Sbjct: 239 QTISRLESLGIKNDELSNCLTAV 261
>gi|353236783|emb|CCA68770.1| probable PIM1-ATP-dependent protease, mitochondrial [Piriformospora
indica DSM 11827]
Length = 1108
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 604 GKIICFVGPPGVGKTSIGKSIARALNRQF 632
>gi|281348020|gb|EFB23604.1| hypothetical protein PANDA_017625 [Ailuropoda melanoleuca]
Length = 885
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 21/29 (72%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK + F G PGVGKT++ R IAR LS E+
Sbjct: 442 GKILCFYGPPGVGKTSIARSIARALSREY 470
>gi|240282104|gb|EER45607.1| lon proteinase [Ajellomyces capsulatus H143]
Length = 1080
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|225559174|gb|EEH07457.1| lon proteinase [Ajellomyces capsulatus G186AR]
Length = 1080
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|443921317|gb|ELU41011.1| ATP-dependent protease La [Rhizoctonia solani AG-1 IA]
Length = 1092
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 584 GKIICFVGPPGVGKTSIGKSIARALNRQF 612
>gi|322706678|gb|EFY98258.1| ATP-dependent protease La [Metarhizium anisopliae ARSEF 23]
Length = 1124
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 597 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 655
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 656 QALKKCQTENP 666
>gi|254875766|ref|ZP_05248476.1| DNA repair protein radA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841787|gb|EET20201.1| DNA repair protein radA [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 456
Score = 38.9 bits (89), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 69/141 (48%), Gaps = 18/141 (12%)
Query: 77 RAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKT 136
RAG G++ + +A+ KG R+ +S ++ + G L G PG+GK+
Sbjct: 48 RAGFAGSISKATALADIKGK---EHSRMSTNISEFDRVLGGGIVKGSVTLVGGDPGIGKS 104
Query: 137 TVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--QHKVMIE 194
+++ +I LS QK+V+ V G+ + A+ A R+ +P+ +L + IE
Sbjct: 105 SILLQIMSFLS--LQKKVLYVS------GEESLEQIAL-RAERLSLPKDNLLVMCETNIE 155
Query: 195 AVEN----HMPEVIIVDEIGT 211
+ + H PEV+++D I T
Sbjct: 156 QISSYIIEHKPEVVVIDSIQT 176
>gi|448346878|ref|ZP_21535757.1| replication factor C small subunit [Natrinema altunense JCM 12890]
gi|445631215|gb|ELY84447.1| replication factor C small subunit [Natrinema altunense JCM 12890]
Length = 330
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 108 VSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSN 161
+ GH D+V L +Y + +LF G G GKTT + IAR V D++Q+ + ++ S+
Sbjct: 31 IKGHTDIVPRLKNYVEQDDLPHLLFAGPAGTGKTTAAKSIAREVYDDDWQENFLELNASD 90
Query: 162 EIGGD 166
+ G D
Sbjct: 91 QRGID 95
>gi|365158968|ref|ZP_09355155.1| hypothetical protein HMPREF1014_00618 [Bacillus sp. 7_6_55CFAA_CT2]
gi|363625957|gb|EHL76966.1| hypothetical protein HMPREF1014_00618 [Bacillus sp. 7_6_55CFAA_CT2]
Length = 347
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 30/121 (24%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 115 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 173
+ L Y + +L F G G GKTT M + V+ + +R++ ++ E D +
Sbjct: 129 LLSFLRYSQGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIITLEDPVEKRSDDVL---- 184
Query: 174 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
++Q+ E + L +++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGLTYEIGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 233 H 233
H
Sbjct: 240 H 240
>gi|322700953|gb|EFY92705.1| ATP-dependent protease La [Metarhizium acridum CQMa 102]
Length = 1118
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 597 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 655
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 656 QALKKCQTENP 666
>gi|295667187|ref|XP_002794143.1| ATP-dependent protease La [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286249|gb|EEH41815.1| ATP-dependent protease La [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1073
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 562 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 620
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 621 QALKKCQTENP 631
>gi|46123611|ref|XP_386359.1| hypothetical protein FG06183.1 [Gibberella zeae PH-1]
Length = 1086
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 604 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRMI 662
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 663 QALKKCQTENP 673
>gi|374708661|ref|ZP_09713095.1| competence protein comGA [Sporolactobacillus inulinus CASD]
Length = 363
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 52/119 (43%), Gaps = 11/119 (9%)
Query: 118 LLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT 176
LL Y ++ + P G GKTT + I L F+ RV+ ++ E D +
Sbjct: 136 LLSYDSGLILISGPTGSGKTTTLYSILSTLQRRFRGRVITIEDPIEKKNDAFV------- 188
Query: 177 ARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG 234
+M+V E + + A+ H P++I++ EI E A A G +++ T H
Sbjct: 189 --QMEVNEKAHFTYAEGFRALLRHDPDIIMIGEIRDEETARIAIRAALSGHLVLSTVHA 245
>gi|326472526|gb|EGD96535.1| lon proteinase [Trichophyton tonsurans CBS 112818]
Length = 819
Score = 38.9 bits (89), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 311 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 369
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 370 QALKKCQTENP 380
>gi|255038517|ref|YP_003089138.1| DNA repair protein RadA [Dyadobacter fermentans DSM 18053]
gi|254951273|gb|ACT95973.1| DNA repair protein RadA [Dyadobacter fermentans DSM 18053]
Length = 457
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 47/97 (48%), Gaps = 18/97 (18%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGT-ARRM 180
G +L G PG+GK+T+M +IA LS+ KRV+ V G+ + I A RM
Sbjct: 90 GSLVLIGGEPGIGKSTLMLQIALTLSN---KRVLYV--------SGEESEAQIKMRAERM 138
Query: 181 QVPEPSL------QHKVMIEAVENHMPEVIIVDEIGT 211
+ Q + + +E+ PE++IVD I T
Sbjct: 139 AAKSDNCFILTDTQTQNIFRQIEDFQPEILIVDSIQT 175
>gi|226291713|gb|EEH47141.1| ATP-dependent protease La [Paracoccidioides brasiliensis Pb18]
Length = 1073
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 562 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYIGALPGRVI 620
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 621 QALKKCQTENP 631
>gi|225679937|gb|EEH18221.1| ATP-dependent protease La [Paracoccidioides brasiliensis Pb03]
Length = 1073
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 562 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYIGALPGRVI 620
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 621 QALKKCQTENP 631
>gi|386814213|ref|ZP_10101437.1| conserved hypothetical protein [planctomycete KSU-1]
gi|386403710|dbj|GAB64318.1| conserved hypothetical protein [planctomycete KSU-1]
Length = 178
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 49/105 (46%), Gaps = 20/105 (19%)
Query: 123 KSILFVGRPGVGKTTVMREI---------------ARVLSDEFQKRVVIVDTSNEIGGDG 167
K IL G+PGVGKTTVMR+I RV+ RVV +D N I
Sbjct: 5 KHILLTGKPGVGKTTVMRKIIPLLGADAGGFFTEEIRVMGKRMGFRVVTLDGDNGILAHV 64
Query: 168 DIPHSAIGTARRMQVPEPSLQHKVMIEAVENHMPE--VIIVDEIG 210
D HS + V S + ++ I +EN M ++++DEIG
Sbjct: 65 DY-HSDYRVG-KYYVDLDSFE-RIAIPTLENAMKNKSILVIDEIG 106
>gi|358374147|dbj|GAA90741.1| mitochondrial DNA helicase [Aspergillus kawachii IFO 4308]
Length = 761
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
++ GKSI F G G GK+ +MREI + L D+++K
Sbjct: 252 VVQQGKSIFFTGSAGTGKSVLMREIIKKLRDKYKK 286
>gi|402224887|gb|EJU04949.1| ATP-dependent protease La [Dacryopinax sp. DJM-731 SS1]
Length = 904
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 377 GKIICFVGPPGVGKTSIGKSIARALNRQF 405
>gi|423657201|ref|ZP_17632500.1| hypothetical protein IKG_04189 [Bacillus cereus VD200]
gi|401289944|gb|EJR95648.1| hypothetical protein IKG_04189 [Bacillus cereus VD200]
Length = 347
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 58/121 (47%), Gaps = 11/121 (9%)
Query: 115 VYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSA 173
+ L Y + +L F G G GKTT M + V+ + +R++ ++ E D I
Sbjct: 129 LLSFLRYSQGLLVFTGPTGSGKTTTMYALLEVIRKKKTRRIITLEDPVEKRSDDVI---- 184
Query: 174 IGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTA 232
++Q+ E + L ++ ++A+ H P++I+V EI E A + G +++ T
Sbjct: 185 -----QIQINEKAGLTYETGLKAILRHDPDIILVGEIRDEETAKIAIRASLTGHLVMTTL 239
Query: 233 H 233
H
Sbjct: 240 H 240
>gi|294614176|ref|ZP_06694096.1| ComG operon protein 1 [Enterococcus faecium E1636]
gi|430850302|ref|ZP_19468064.1| competence protein ComGA [Enterococcus faecium E1185]
gi|291592952|gb|EFF24541.1| ComG operon protein 1 [Enterococcus faecium E1636]
gi|430535640|gb|ELA76039.1| competence protein ComGA [Enterococcus faecium E1185]
Length = 309
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 184
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 241
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 242 -----KNPILSDLIGGV 253
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|115378658|ref|ZP_01465808.1| replicative DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|310823081|ref|YP_003955439.1| replicative DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|115364324|gb|EAU63409.1| replicative DNA helicase [Stigmatella aurantiaca DW4/3-1]
gi|309396153|gb|ADO73612.1| Replicative DNA helicase [Stigmatella aurantiaca DW4/3-1]
Length = 459
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 9/66 (13%)
Query: 80 IEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDL--LHYGKSILFVGRPGVGKTT 137
+E TL+ + +++ + GL+ +G++D+ L LH G+ I+ RPG+GKT+
Sbjct: 169 MEQTLNLLDKMKASSSGVTGLS-------TGYVDLDMQLTGLHAGELIILAARPGIGKTS 221
Query: 138 VMREIA 143
+ IA
Sbjct: 222 LAMNIA 227
>gi|434387087|ref|YP_007097698.1| pilus retraction protein PilT [Chamaesiphon minutus PCC 6605]
gi|428018077|gb|AFY94171.1| pilus retraction protein PilT [Chamaesiphon minutus PCC 6605]
Length = 396
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 54/118 (45%), Gaps = 6/118 (5%)
Query: 117 DLLHYGKSILFVGRP-GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIG 175
D+ HY K ++ V P G GK+T M + ++ E + ++ ++ E I S
Sbjct: 161 DVCHYHKGLILVTGPTGSGKSTSMAAMVDYMNKEMPRHIITIEDPIEF-----IHKSKRA 215
Query: 176 TARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAH 233
+ +V +L+ ++A P+VI+V E+ + A+ G ++IGT H
Sbjct: 216 LIKHREVGANTLKFDTALKAALREDPDVILVGEMRDRETVNTALKAAQTGHLVIGTLH 273
>gi|296411936|ref|XP_002835684.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295629473|emb|CAZ79841.1| unnamed protein product [Tuber melanosporum]
Length = 1073
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/29 (58%), Positives = 22/29 (75%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEF 150
GK I FVG PGVGKT++ + IAR L+ +F
Sbjct: 557 GKIICFVGPPGVGKTSIGKSIARALNRQF 585
>gi|293566166|ref|ZP_06678569.1| ComG operon protein 1 [Enterococcus faecium E1071]
gi|294618791|ref|ZP_06698318.1| putative ABC transporter, ATP-binding protein ComYA; competence
protein [Enterococcus faecium E1679]
gi|294622213|ref|ZP_06701273.1| ComG operon protein 1 [Enterococcus faecium U0317]
gi|406579509|ref|ZP_11054739.1| type II/IV secretion system protein [Enterococcus sp. GMD4E]
gi|406581779|ref|ZP_11056915.1| type II/IV secretion system protein [Enterococcus sp. GMD3E]
gi|406583818|ref|ZP_11058857.1| type II/IV secretion system protein [Enterococcus sp. GMD2E]
gi|406591427|ref|ZP_11065709.1| type II/IV secretion system protein [Enterococcus sp. GMD1E]
gi|410936672|ref|ZP_11368536.1| type II/IV secretion system protein [Enterococcus sp. GMD5E]
gi|416130740|ref|ZP_11597526.1| ComG operon protein 1 [Enterococcus faecium E4452]
gi|427395781|ref|ZP_18888703.1| hypothetical protein HMPREF9307_00879 [Enterococcus durans
FB129-CNAB-4]
gi|430823642|ref|ZP_19442211.1| competence protein ComGA [Enterococcus faecium E0120]
gi|430836634|ref|ZP_19454611.1| competence protein ComGA [Enterococcus faecium E0680]
gi|430839668|ref|ZP_19457606.1| competence protein ComGA [Enterococcus faecium E0688]
gi|430845219|ref|ZP_19463115.1| competence protein ComGA [Enterococcus faecium E1050]
gi|430853883|ref|ZP_19471609.1| competence protein ComGA [Enterococcus faecium E1258]
gi|430859544|ref|ZP_19477155.1| competence protein ComGA [Enterococcus faecium E1552]
gi|430860936|ref|ZP_19478531.1| competence protein ComGA [Enterococcus faecium E1573]
gi|430866723|ref|ZP_19481949.1| competence protein ComGA [Enterococcus faecium E1574]
gi|430960557|ref|ZP_19487093.1| competence protein ComGA [Enterococcus faecium E1576]
gi|431012419|ref|ZP_19490210.1| competence protein ComGA [Enterococcus faecium E1578]
gi|431260202|ref|ZP_19505708.1| competence protein ComGA [Enterococcus faecium E1623]
gi|431305110|ref|ZP_19508477.1| competence protein ComGA [Enterococcus faecium E1626]
gi|431381371|ref|ZP_19510973.1| competence protein ComGA [Enterococcus faecium E1627]
gi|431520338|ref|ZP_19516621.1| competence protein ComGA [Enterococcus faecium E1634]
gi|431702966|ref|ZP_19525089.1| competence protein ComGA [Enterococcus faecium E1904]
gi|431744412|ref|ZP_19533280.1| competence protein ComGA [Enterococcus faecium E2071]
gi|431745100|ref|ZP_19533954.1| competence protein ComGA [Enterococcus faecium E2134]
gi|431777504|ref|ZP_19565758.1| competence protein ComGA [Enterococcus faecium E2560]
gi|431783770|ref|ZP_19571861.1| competence protein ComGA [Enterococcus faecium E6012]
gi|431786280|ref|ZP_19574294.1| competence protein ComGA [Enterococcus faecium E6045]
gi|291590092|gb|EFF21884.1| ComG operon protein 1 [Enterococcus faecium E1071]
gi|291594979|gb|EFF26329.1| putative ABC transporter, ATP-binding protein ComYA; competence
protein [Enterococcus faecium E1679]
gi|291598255|gb|EFF29348.1| ComG operon protein 1 [Enterococcus faecium U0317]
gi|364093909|gb|EHM36139.1| ComG operon protein 1 [Enterococcus faecium E4452]
gi|404455237|gb|EKA02096.1| type II/IV secretion system protein [Enterococcus sp. GMD4E]
gi|404459244|gb|EKA05614.1| type II/IV secretion system protein [Enterococcus sp. GMD3E]
gi|404464966|gb|EKA10475.1| type II/IV secretion system protein [Enterococcus sp. GMD2E]
gi|404467742|gb|EKA12808.1| type II/IV secretion system protein [Enterococcus sp. GMD1E]
gi|410735088|gb|EKQ77005.1| type II/IV secretion system protein [Enterococcus sp. GMD5E]
gi|425723770|gb|EKU86657.1| hypothetical protein HMPREF9307_00879 [Enterococcus durans
FB129-CNAB-4]
gi|430441675|gb|ELA51746.1| competence protein ComGA [Enterococcus faecium E0120]
gi|430487957|gb|ELA64650.1| competence protein ComGA [Enterococcus faecium E0680]
gi|430490404|gb|ELA66929.1| competence protein ComGA [Enterococcus faecium E0688]
gi|430496053|gb|ELA72173.1| competence protein ComGA [Enterococcus faecium E1050]
gi|430540132|gb|ELA80350.1| competence protein ComGA [Enterococcus faecium E1258]
gi|430543511|gb|ELA83573.1| competence protein ComGA [Enterococcus faecium E1552]
gi|430550773|gb|ELA90543.1| competence protein ComGA [Enterococcus faecium E1574]
gi|430551254|gb|ELA91023.1| competence protein ComGA [Enterococcus faecium E1573]
gi|430556066|gb|ELA95582.1| competence protein ComGA [Enterococcus faecium E1576]
gi|430559930|gb|ELA99254.1| competence protein ComGA [Enterococcus faecium E1578]
gi|430576941|gb|ELB15566.1| competence protein ComGA [Enterococcus faecium E1623]
gi|430579317|gb|ELB17826.1| competence protein ComGA [Enterococcus faecium E1626]
gi|430581733|gb|ELB20171.1| competence protein ComGA [Enterococcus faecium E1627]
gi|430585218|gb|ELB23513.1| competence protein ComGA [Enterococcus faecium E1634]
gi|430597049|gb|ELB34860.1| competence protein ComGA [Enterococcus faecium E1904]
gi|430605155|gb|ELB42560.1| competence protein ComGA [Enterococcus faecium E2071]
gi|430611154|gb|ELB48264.1| competence protein ComGA [Enterococcus faecium E2134]
gi|430639616|gb|ELB75489.1| competence protein ComGA [Enterococcus faecium E2560]
gi|430644515|gb|ELB80125.1| competence protein ComGA [Enterococcus faecium E6012]
gi|430645765|gb|ELB81268.1| competence protein ComGA [Enterococcus faecium E6045]
Length = 309
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 184
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 241
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 242 -----KNPILSDLIGGV 253
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|302895269|ref|XP_003046515.1| hypothetical protein NECHADRAFT_66291 [Nectria haematococca mpVI
77-13-4]
gi|256727442|gb|EEU40802.1| hypothetical protein NECHADRAFT_66291 [Nectria haematococca mpVI
77-13-4]
Length = 1120
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 599 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRMI 657
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 658 QALKKCQTENP 668
>gi|145249534|ref|XP_001401106.1| DNA helicase PIF1 [Aspergillus niger CBS 513.88]
gi|134081788|emb|CAK42044.1| unnamed protein product [Aspergillus niger]
Length = 800
Score = 38.9 bits (89), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 16/35 (45%), Positives = 24/35 (68%)
Query: 118 LLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
++ GKSI F G G GK+ +MREI + L D+++K
Sbjct: 298 VVQQGKSIFFTGSAGTGKSVLMREIIKKLRDKYKK 332
>gi|448342324|ref|ZP_21531276.1| replication factor C small subunit [Natrinema gari JCM 14663]
gi|445626315|gb|ELY79664.1| replication factor C small subunit [Natrinema gari JCM 14663]
Length = 330
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 37/65 (56%), Gaps = 6/65 (9%)
Query: 108 VSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIAR-VLSDEFQKRVVIVDTSN 161
+ GH D+V L +Y + +LF G G GKTT + IAR V D++Q+ + ++ S+
Sbjct: 31 IKGHTDIVPRLKNYVEQDDLPHLLFAGPAGTGKTTAAKSIAREVYDDDWQENFLELNASD 90
Query: 162 EIGGD 166
+ G D
Sbjct: 91 QRGID 95
>gi|430820741|ref|ZP_19439364.1| competence protein ComGA [Enterococcus faecium E0045]
gi|430826539|ref|ZP_19444719.1| competence protein ComGA [Enterococcus faecium E0164]
gi|430829137|ref|ZP_19447235.1| competence protein ComGA [Enterococcus faecium E0269]
gi|431218506|ref|ZP_19501316.1| competence protein ComGA [Enterococcus faecium E1620]
gi|431765560|ref|ZP_19554070.1| competence protein ComGA [Enterococcus faecium E4215]
gi|430439287|gb|ELA49653.1| competence protein ComGA [Enterococcus faecium E0045]
gi|430444947|gb|ELA54744.1| competence protein ComGA [Enterococcus faecium E0164]
gi|430481556|gb|ELA58710.1| competence protein ComGA [Enterococcus faecium E0269]
gi|430569575|gb|ELB08566.1| competence protein ComGA [Enterococcus faecium E1620]
gi|430628034|gb|ELB64491.1| competence protein ComGA [Enterococcus faecium E4215]
Length = 309
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 184
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 138 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 184
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 241
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 185 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 244
Query: 242 -----KNPILSDLIGGV 253
K LS+ + GV
Sbjct: 245 HELTKKKEELSECLAGV 261
>gi|342320667|gb|EGU12606.1| Lon protease [Rhodotorula glutinis ATCC 204091]
Length = 1226
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 38/128 (29%), Positives = 64/128 (50%), Gaps = 19/128 (14%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GK + FVG PGVGKT++ + IAR L +F + V GG D+ + I RR
Sbjct: 683 GKILCFVGPPGVGKTSIGKSIARALDRQFFRFSV--------GGLSDV--AEIKGHRRTY 732
Query: 182 VPEPSLQHKVM--IEAVENHMPEVII--VDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
V ++ K++ ++ V+ P V+I VD+IG ++ E ML + ++L
Sbjct: 733 V--GAMPGKIIQALKKVQTENPLVLIDEVDKIGRGHNGDPSSALLE---MLDPEQNAQFL 787
Query: 238 ENIIKNPI 245
++ + P+
Sbjct: 788 DHYLDVPV 795
>gi|302681813|ref|XP_003030588.1| hypothetical protein SCHCODRAFT_57861 [Schizophyllum commune H4-8]
gi|300104279|gb|EFI95685.1| hypothetical protein SCHCODRAFT_57861 [Schizophyllum commune H4-8]
Length = 1042
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 57/138 (41%), Gaps = 37/138 (26%)
Query: 119 LHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTAR 178
+H +L GRPG GKT+++R +AR+L E+ + ++ + + P SAI
Sbjct: 404 VHGVTGLLLTGRPGAGKTSIVRAVARLL--EYDQTLLTYTLYADASAISEKPISAIKA-- 459
Query: 179 RMQVPEPSLQHKVMIEAVENHMPEVIIVDEI----GTEAEAHA---CRSIAE-------- 223
Q + H P ++I+D++ G E E A R I E
Sbjct: 460 ---------QFDYWFDKAMWHRPAILILDDVDKLLGAEMEHTASFRARHIVELFLARFAP 510
Query: 224 ---------RGVMLIGTA 232
RGV+LI TA
Sbjct: 511 AARAAPLNSRGVLLIATA 528
>gi|403668178|ref|ZP_10933455.1| hypothetical protein KJC8E_05271 [Kurthia sp. JC8E]
Length = 360
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 27/155 (17%)
Query: 118 LLHYGKSILF--VGRPGVGKTTVMREIARVLSDEFQKRVVI-VDTSNEIGGDGDIPHSAI 174
L H GKSI G PG GK+T + ++L D+ K V+ +D S+ I G S +
Sbjct: 80 LPHTGKSIRIGITGVPGAGKSTFIETFGKMLCDQGHKVAVLAIDPSSSITGG-----SIL 134
Query: 175 GTARRMQV----------PEPSLQ-----HKVMIEAV---ENHMPEVIIVDEIGTEAEAH 216
G RM+ P PS H+ E + E +VI+++ +G
Sbjct: 135 GDKTRMEELSREKNAFIRPSPSAGTLGGVHRKTRETMLLCEAAGYDVILIETVGVGQSET 194
Query: 217 ACRSIAERGVMLIGTAHGEWLENIIKNPI-LSDLI 250
A R++ + ++L+ T G+ L+ + K + L+D I
Sbjct: 195 AVRNMVDFFLLLVLTGAGDELQGMKKGIMELADAI 229
>gi|350272673|ref|YP_004883981.1| hypothetical protein OBV_42770 [Oscillibacter valericigenes
Sjm18-20]
gi|348597515|dbj|BAL01476.1| hypothetical protein OBV_42770 [Oscillibacter valericigenes
Sjm18-20]
Length = 488
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 40/170 (23%), Positives = 71/170 (41%), Gaps = 13/170 (7%)
Query: 75 DNRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVG 134
D G+ ++ ++ +K +G G A +D + + L YG S G G
Sbjct: 206 DEDVGVSASIRIVNPQNMQKADFIG----GGTATEPMLDFLTECLRYGISTCVAGATSSG 261
Query: 135 KTTVMREIARVLSDEFQKRVVIVDT-SNEIG----GDGDIPHSAIGTARRMQVPEP-SLQ 188
KTT+ + + KR+ ++ S E+ +G + +S I T R E ++
Sbjct: 262 KTTLAGWLLTTIPK--NKRIFTIENGSRELALVRQENGKVVNSVIHTLTRFSENEKQNID 319
Query: 189 HKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLE 238
+++ PEVI V E+ +EA+A + A G ++ T H E
Sbjct: 320 QDTLLDLALRFNPEVICVGEM-RGSEAYAAQEAARTGHTVLTTIHSNSCE 368
>gi|325088244|gb|EGC41554.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 1059
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 567 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRVI 625
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 626 QALKKCQTENP 636
>gi|410931020|ref|XP_003978894.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Takifugu
rubripes]
Length = 837
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
G + FVG PGVGKT+V R IAR L EF +
Sbjct: 367 GPILCFVGPPGVGKTSVGRSIARTLGREFHR 397
>gi|268317889|ref|YP_003291608.1| DNA repair protein RadA [Rhodothermus marinus DSM 4252]
gi|262335423|gb|ACY49220.1| DNA repair protein RadA [Rhodothermus marinus DSM 4252]
Length = 453
Score = 38.9 bits (89), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 46/96 (47%), Gaps = 16/96 (16%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
G IL G PG+GK+T+M E+AR L D +RV+ V + ARR+
Sbjct: 90 GSLILLAGDPGIGKSTLMTELARYLPD---RRVLYVTGEESV-------RQVRLRARRLG 139
Query: 182 VPEPSL------QHKVMIEAVENHMPEVIIVDEIGT 211
V +L + ++EA P+V++VD I T
Sbjct: 140 VEGDNLLLLAETNLEAILEAARRVAPDVLVVDSIQT 175
>gi|71906157|ref|YP_283744.1| ATPase AAA [Dechloromonas aromatica RCB]
gi|71845778|gb|AAZ45274.1| AAA ATPase, central region:ATPase associated with various cellular
activities, AAA_5 [Dechloromonas aromatica RCB]
Length = 301
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 45/95 (47%), Gaps = 12/95 (12%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
+ +L G PG GKT + E+AR L+ FQ V S G + A+ R Q
Sbjct: 48 RPLLIKGEPGTGKTLLAEEVARALNMPLFQWHV----KSTTKAQQGLYEYDAVSRLRDSQ 103
Query: 182 VPEPSLQ-------HKVMIEAVENHMPEVIIVDEI 209
+ +P ++ H V+ +A E P V+++DEI
Sbjct: 104 LGDPRVEDISHYIVHGVLWQAFECDEPSVVLIDEI 138
>gi|334564121|ref|ZP_08517112.1| putative FtsK/SpoIIIE family protein [Corynebacterium bovis DSM
20582]
Length = 1070
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 71/155 (45%), Gaps = 20/155 (12%)
Query: 126 LFVGRPGVGKTTVMREIARVLS-DEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
+ VGRP GKTT++R +A LS V +VD + G +P A V
Sbjct: 634 IVVGRPQSGKTTLVRAVALALSLSSPGVAVYVVDGGGALTELGRLPQVA-------AVAG 686
Query: 185 PSLQHKVMIEAV---ENHMPEVIIVDEIGTEAEAHACRSIA----ERGVMLIGTAHGEWL 237
P L +V+ + + E+ P V++VD + + IA +RG L+ T+ L
Sbjct: 687 PGLVDRVLDDVLLRMESRSPTVLLVDGLDAVGDDPRLVDIATRGLDRGTHLVVTS----L 742
Query: 238 ENIIKNPILSDLIGGVDTVTLGDEEARARRCQKSI 272
+I+ P L D + G + + E+R RR Q ++
Sbjct: 743 RWMIR-PQLRDALTGAVELAVDPAESRFRRAQAAM 776
>gi|291190900|ref|NP_001167070.1| peroxisomal Lon protease homolog 2 [Salmo salar]
gi|223647948|gb|ACN10732.1| Peroxisomal Lon protease homolog 2 [Salmo salar]
Length = 863
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
G + FVG PGVGKT+V R IAR L EF +
Sbjct: 374 GPILCFVGPPGVGKTSVGRSIARTLGREFHR 404
>gi|302306714|ref|NP_983086.2| ABR139Wp [Ashbya gossypii ATCC 10895]
gi|299788650|gb|AAS50910.2| ABR139Wp [Ashbya gossypii ATCC 10895]
Length = 1326
Score = 38.9 bits (89), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+ +LF G PG GKT + R +A S E +K + DI +G A R
Sbjct: 405 RGVLFYGPPGTGKTLMARALAASCSTEKRKITFYMRKG------ADILSKWVGEAER--- 455
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEI 209
Q +++ E + H P +I DEI
Sbjct: 456 -----QLRLLFEEAKKHQPSIIFFDEI 477
>gi|427709313|ref|YP_007051690.1| putative signal transduction protein with Nacht domain [Nostoc sp.
PCC 7107]
gi|427361818|gb|AFY44540.1| putative signal transduction protein with Nacht domain [Nostoc sp.
PCC 7107]
Length = 1374
Score = 38.9 bits (89), Expect = 3.8, Method: Composition-based stats.
Identities = 16/35 (45%), Positives = 25/35 (71%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVI 156
G+ I +G PG GKTT++++IA +S E Q+ +VI
Sbjct: 73 GRRIAIIGEPGAGKTTLLQQIADWVSREIQQSIVI 107
>gi|290990195|ref|XP_002677722.1| lon protease [Naegleria gruberi]
gi|284091331|gb|EFC44978.1| lon protease [Naegleria gruberi]
Length = 1007
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 44/102 (43%), Gaps = 25/102 (24%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK IL +G PGVGKT++ + IA L EF + V + D S EI G G IP I
Sbjct: 530 GKIILLMGPPGVGKTSIGKSIASSLGREFHRFSVGGLTDVS-EIKGHRRTYIGSIPGKLI 588
Query: 175 GTARRMQVPEPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAH 216
+ + P VI++DEI +H
Sbjct: 589 NIMKHCKTNNP-----------------VIMIDEIDKLGRSH 613
>gi|261209207|ref|ZP_05923599.1| type II secretion system protein E [Enterococcus faecium TC 6]
gi|289566124|ref|ZP_06446559.1| type II secretion system protein E [Enterococcus faecium D344SRF]
gi|260076753|gb|EEW64488.1| type II secretion system protein E [Enterococcus faecium TC 6]
gi|289162069|gb|EFD09934.1| type II secretion system protein E [Enterococcus faecium D344SRF]
Length = 317
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 184
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 146 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 192
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 241
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 193 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 252
Query: 242 -----KNPILSDLIGGV 253
K LS+ + GV
Sbjct: 253 HELTKKKEELSECLAGV 269
>gi|257882134|ref|ZP_05661787.1| type II/IV secretion system protein [Enterococcus faecium
1,231,502]
gi|257885325|ref|ZP_05664978.1| type II/IV secretion system protein [Enterococcus faecium
1,231,501]
gi|424779533|ref|ZP_18206453.1| ComG operon protein 1 family protein [Enterococcus faecium V689]
gi|424795867|ref|ZP_18221673.1| ComG operon protein 1 family protein [Enterococcus faecium S447]
gi|424938655|ref|ZP_18354429.1| ComG operon protein 1 family protein [Enterococcus faecium R496]
gi|424952956|ref|ZP_18367947.1| ComG operon protein 1 family protein [Enterococcus faecium R494]
gi|424956126|ref|ZP_18370921.1| ComG operon protein 1 family protein [Enterococcus faecium R446]
gi|424966632|ref|ZP_18380396.1| ComG operon protein 1 family protein [Enterococcus faecium P1140]
gi|424993962|ref|ZP_18405929.1| ComG operon protein 1 family protein [Enterococcus faecium ERV168]
gi|424996613|ref|ZP_18408411.1| ComG operon protein 1 family protein [Enterococcus faecium ERV165]
gi|425000724|ref|ZP_18412274.1| ComG operon protein 1 family protein [Enterococcus faecium ERV161]
gi|425003518|ref|ZP_18414882.1| ComG operon protein 1 family protein [Enterococcus faecium ERV102]
gi|425010086|ref|ZP_18421058.1| ComG operon protein 1 family protein [Enterococcus faecium E422]
gi|425017476|ref|ZP_18427979.1| ComG operon protein 1 family protein [Enterococcus faecium C621]
gi|425031905|ref|ZP_18437000.1| ComG operon protein 1 family protein [Enterococcus faecium 515]
gi|425037662|ref|ZP_18442313.1| ComG operon protein 1 family protein [Enterococcus faecium 513]
gi|257817792|gb|EEV45120.1| type II/IV secretion system protein [Enterococcus faecium
1,231,502]
gi|257821181|gb|EEV48311.1| type II/IV secretion system protein [Enterococcus faecium
1,231,501]
gi|402923884|gb|EJX44134.1| ComG operon protein 1 family protein [Enterococcus faecium S447]
gi|402925099|gb|EJX45270.1| ComG operon protein 1 family protein [Enterococcus faecium V689]
gi|402936577|gb|EJX55747.1| ComG operon protein 1 family protein [Enterococcus faecium R496]
gi|402940163|gb|EJX59019.1| ComG operon protein 1 family protein [Enterococcus faecium R494]
gi|402946686|gb|EJX64943.1| ComG operon protein 1 family protein [Enterococcus faecium R446]
gi|402956187|gb|EJX73661.1| ComG operon protein 1 family protein [Enterococcus faecium P1140]
gi|402981301|gb|EJX96840.1| ComG operon protein 1 family protein [Enterococcus faecium ERV168]
gi|402988200|gb|EJY03218.1| ComG operon protein 1 family protein [Enterococcus faecium ERV165]
gi|402988580|gb|EJY03577.1| ComG operon protein 1 family protein [Enterococcus faecium ERV161]
gi|402991827|gb|EJY06575.1| ComG operon protein 1 family protein [Enterococcus faecium ERV102]
gi|403001114|gb|EJY15186.1| ComG operon protein 1 family protein [Enterococcus faecium E422]
gi|403004261|gb|EJY18080.1| ComG operon protein 1 family protein [Enterococcus faecium C621]
gi|403014441|gb|EJY27444.1| ComG operon protein 1 family protein [Enterococcus faecium 515]
gi|403021445|gb|EJY33903.1| ComG operon protein 1 family protein [Enterococcus faecium 513]
Length = 317
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 36/137 (26%), Positives = 63/137 (45%), Gaps = 22/137 (16%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-PE 184
LF G G GKT++M +A L ++ Q V+ ++ EI + ++Q+ P+
Sbjct: 146 LFSGPVGSGKTSLMYRLA--LEEKLQ--VITIEDPVEIEEPFFL---------QLQINPK 192
Query: 185 PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII--- 241
+ + +++ H P+++I+ EI E+ AHA A G + T H LE +
Sbjct: 193 IAQTYDTLLKLALRHRPDLLIIGEIRDESTAHAAVRAALTGHRVFATVHARNLEGTLVRI 252
Query: 242 -----KNPILSDLIGGV 253
K LS+ + GV
Sbjct: 253 HELTKKKEELSECLAGV 269
>gi|374106289|gb|AEY95199.1| FABR139Wp [Ashbya gossypii FDAG1]
Length = 1326
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 14/87 (16%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
+ +LF G PG GKT + R +A S E +K + DI +G A R
Sbjct: 405 RGVLFYGPPGTGKTLMARALAASCSTEKRKITFYMRKG------ADILSKWVGEAER--- 455
Query: 183 PEPSLQHKVMIEAVENHMPEVIIVDEI 209
Q +++ E + H P +I DEI
Sbjct: 456 -----QLRLLFEEAKKHQPSIIFFDEI 477
>gi|320547853|ref|ZP_08042137.1| competence protein ComGA [Streptococcus equinus ATCC 9812]
gi|320447613|gb|EFW88372.1| competence protein ComGA [Streptococcus equinus ATCC 9812]
Length = 350
Score = 38.9 bits (89), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 43/169 (25%), Positives = 73/169 (43%), Gaps = 34/169 (20%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQ-KRVVIVDTSNEIGGDGDIPHSAIGTARRMQV-P 183
LF G G GKTT+M ++ R ++F K+V+ ++ EI D + ++Q+
Sbjct: 173 LFSGPVGSGKTTLMYQLVR---EKFPGKQVITIEDPVEIKQDNML---------QLQLND 220
Query: 184 EPSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG--------- 234
E + + +I+ H P+++I+ EI A A + GV++ T H
Sbjct: 221 EIGMTYDNLIKLSLRHRPDILIIGEIRDSETARAVIRASLTGVLVFSTIHAKSIPGVYAR 280
Query: 235 --------EWLENIIKNPILSDLIGG---VDTVTLGDEEARARRCQKSI 272
+ LEN ++ + LIGG VD E+ RR + I
Sbjct: 281 LLELGVSRQELENSLRAIVYQRLIGGGGVVDFAKRDFEQYPPRRWNEQI 329
>gi|389739240|gb|EIM80434.1| hypothetical protein STEHIDRAFT_172690 [Stereum hirsutum FP-91666
SS1]
Length = 623
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 38/78 (48%), Gaps = 4/78 (5%)
Query: 87 ISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVL 146
+SA +S K A+ T +S + L+ GKSI + G G GK+ ++REI + +
Sbjct: 142 VSAAQSSKAAVKPATI----FLSSEQKQILQLVKDGKSIFYTGSAGTGKSVLLREIIKAM 197
Query: 147 SDEFQKRVVIVDTSNEIG 164
++ K + V + G
Sbjct: 198 HKKYAKSLEAVAVTASTG 215
>gi|358384574|gb|EHK22171.1| hypothetical protein TRIVIDRAFT_230449 [Trichoderma virens Gv29-8]
Length = 1137
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 620 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 678
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 679 QALKKCQTENP 689
>gi|348503894|ref|XP_003439497.1| PREDICTED: lon protease homolog 2, peroxisomal-like [Oreochromis
niloticus]
Length = 856
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
G + FVG PGVGKT+V R IAR L EF +
Sbjct: 372 GPILCFVGPPGVGKTSVGRSIARTLGREFHR 402
>gi|359787251|ref|ZP_09290311.1| DNA repair protein RadA [Halomonas sp. GFAJ-1]
gi|359295470|gb|EHK59738.1| DNA repair protein RadA [Halomonas sp. GFAJ-1]
Length = 456
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/96 (27%), Positives = 49/96 (51%), Gaps = 15/96 (15%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
G ++L G PG GK+T++ + A L+ Q+R++ V G+ + A+ A R+Q
Sbjct: 94 GSAVLLGGNPGAGKSTLLLQTACKLAQ--QRRILYVT------GEESLSQVAM-RAHRLQ 144
Query: 182 VPEPSLQH------KVMIEAVENHMPEVIIVDEIGT 211
+P LQ + ++ + PE++++D I T
Sbjct: 145 LPTSGLQMLAETSVETILAVADRENPEILVIDSIQT 180
>gi|56693217|ref|NP_001008573.1| lon protease homolog 2, peroxisomal [Danio rerio]
gi|82232440|sp|Q5PQY6.1|LONP2_DANRE RecName: Full=Lon protease homolog 2, peroxisomal
gi|56269780|gb|AAH86968.1| Lon peptidase 2, peroxisomal [Danio rerio]
Length = 840
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/31 (58%), Positives = 21/31 (67%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
G + FVG PGVGKT+V R IAR L EF +
Sbjct: 368 GPILCFVGPPGVGKTSVGRSIARTLGREFHR 398
>gi|47208790|emb|CAF91601.1| unnamed protein product [Tetraodon nigroviridis]
Length = 874
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/31 (54%), Positives = 21/31 (67%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQK 152
G + FVG PGVGKT+V R +AR L EF +
Sbjct: 415 GPILCFVGPPGVGKTSVGRSVARTLGREFHR 445
>gi|358393924|gb|EHK43325.1| hypothetical protein TRIATDRAFT_294380 [Trichoderma atroviride IMI
206040]
Length = 1115
Score = 38.9 bits (89), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 598 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 656
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 657 QALKKCQTENP 667
>gi|346324680|gb|EGX94277.1| ATP-dependent protease La [Cordyceps militaris CM01]
Length = 1253
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 742 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 800
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 801 QALKKCQTENP 811
>gi|197301312|ref|ZP_03166397.1| hypothetical protein RUMLAC_00043 [Ruminococcus lactaris ATCC
29176]
gi|197299630|gb|EDY34145.1| endopeptidase La [Ruminococcus lactaris ATCC 29176]
Length = 755
Score = 38.5 bits (88), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%)
Query: 114 MVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEF 150
M + YG +LFVG PG GKT++ + IAR L E+
Sbjct: 327 MALNRKQYGSILLFVGAPGTGKTSIGQSIARALGREY 363
>gi|448444895|ref|ZP_21590042.1| type II secretion system protein E [Halorubrum saccharovorum DSM
1137]
gi|445685650|gb|ELZ38000.1| type II secretion system protein E [Halorubrum saccharovorum DSM
1137]
Length = 774
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 11/138 (7%)
Query: 112 IDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDT-SNEIGGDGDIP 170
+ +++ L + ++LF G GVGKTT++ + F R V +D S E+ +P
Sbjct: 468 VTLLWLLYEHRGTVLFAGPTGVGKTTLLNAHTPFIP--FDDRPVSIDEGSREV----RLP 521
Query: 171 HSAIGTARRMQVPEPSLQHKVMIE--AVENHM-PEVIIVDEIGTEAEAHACRSIAERGVM 227
H G + + E + + M E A N++ P+V ++ EI T A G
Sbjct: 522 HE-TGVSLTTRDHEDAYKAVSMSELMAEANYLNPDVEVIAEINTPASFETFAETLNTGHG 580
Query: 228 LIGTAHGEWLENIIKNPI 245
+IGT H E +E ++ I
Sbjct: 581 VIGTTHAEDVEALVNRVI 598
>gi|21227723|ref|NP_633645.1| divalent cation transport protein [Methanosarcina mazei Go1]
gi|20906121|gb|AAM31317.1| divalent cation transport protein [Methanosarcina mazei Go1]
Length = 373
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 47/93 (50%), Gaps = 5/93 (5%)
Query: 123 KSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQV 182
K ++ G G GKTT ++ I+R LSD ++ +IV+ EIG DGD +S T R +
Sbjct: 20 KVMIIGGFLGSGKTTAIQRISRQLSDAGKRTAIIVNEIGEIGLDGDTLNSPGITTRELTS 79
Query: 183 PEPSLQHKVMIEAV-----ENHMPEVIIVDEIG 210
K+ ++ E P+++I++ G
Sbjct: 80 GCICCTLKISMQYTLQTLEEEFRPDIVIIEPTG 112
>gi|381182774|ref|ZP_09891561.1| general secretion pathway protein E [Listeriaceae bacterium TTU
M1-001]
gi|380317342|gb|EIA20674.1| general secretion pathway protein E [Listeriaceae bacterium TTU
M1-001]
Length = 336
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 10/118 (8%)
Query: 125 ILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPE 184
LF G G GK+T M + L+ + +K+V+ ++ E + +++V E
Sbjct: 139 FLFSGSTGSGKSTSMYSLVSELTHQTEKQVITIEDPVEHYHQDFL---------QVEVNE 189
Query: 185 -PSLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHGEWLENII 241
L + +I ++ H P+V+I+ EI A A G ++I T H L II
Sbjct: 190 RAGLTYGTIIRSILRHDPDVLIIGEIRDAETAQMATGSALTGHLVISTIHASSLTGII 247
>gi|6319449|ref|NP_009531.1| Pim1p [Saccharomyces cerevisiae S288c]
gi|585414|sp|P36775.2|LONM_YEAST RecName: Full=Lon protease homolog, mitochondrial; Flags: Precursor
gi|453236|emb|CAA52634.1| mitochondrial ATP-dependent protease [Saccharomyces cerevisiae]
gi|536019|emb|CAA84841.1| PIM1 [Saccharomyces cerevisiae]
gi|285810313|tpg|DAA07098.1| TPA: Pim1p [Saccharomyces cerevisiae S288c]
gi|392301197|gb|EIW12286.1| Pim1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1133
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|393221570|gb|EJD07055.1| ATP-dependent protease La [Fomitiporia mediterranea MF3/22]
Length = 1108
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 63/128 (49%), Gaps = 19/128 (14%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQ 181
GK + FVG PGVGKT++ + IAR L+ +F + +GG DI + I RR
Sbjct: 590 GKILCFVGPPGVGKTSIGKSIARALNRQFFRF--------SVGGLTDI--AEIKGHRRTY 639
Query: 182 VPEPSLQHKVM--IEAVENHMPEVII--VDEIGTEAEAHACRSIAERGVMLIGTAHGEWL 237
V +L K++ ++ V P V+I VD+IG ++ E ML + +L
Sbjct: 640 V--GALPSKIIQALKRVGTENPLVLIDEVDKIGKGYNGDPASALLE---MLDPEQNSAFL 694
Query: 238 ENIIKNPI 245
++ + P+
Sbjct: 695 DHYMDVPV 702
>gi|349576359|dbj|GAA21530.1| K7_Pim1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1133
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|254369059|ref|ZP_04985072.1| DNA repair protein radA [Francisella tularensis subsp. holarctica
FSC022]
gi|157121980|gb|EDO66150.1| DNA repair protein radA [Francisella tularensis subsp. holarctica
FSC022]
Length = 456
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 26/146 (17%)
Query: 76 NRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH----YGKSILFVGRP 131
+RAG G++ + +++ + KG + VS HI +L G IL G P
Sbjct: 47 SRAGFAGSISKATSLSAIKG-------KEHSRVSTHIGEFDRVLGGGIVKGSVILVGGDP 99
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--QH 189
G+GK++++ +I LS QK+V+ V G+ + A+ A R+ + + +L
Sbjct: 100 GIGKSSILLQIMSFLS--LQKKVLYVS------GEESLEQIAL-RAERLNLAKDNLLVMC 150
Query: 190 KVMIEAVENHM----PEVIIVDEIGT 211
+ IE + ++M PEV+++D I T
Sbjct: 151 ETNIEQIASYMVEHKPEVVVIDSIQT 176
>gi|118497006|ref|YP_898056.1| DNA repair protein RadA [Francisella novicida U112]
gi|194324241|ref|ZP_03058015.1| DNA repair protein RadA [Francisella novicida FTE]
gi|118422912|gb|ABK89302.1| DNA repair protein radA [Francisella novicida U112]
gi|194321688|gb|EDX19172.1| DNA repair protein RadA [Francisella tularensis subsp. novicida
FTE]
Length = 456
Score = 38.5 bits (88), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 26/146 (17%)
Query: 76 NRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH----YGKSILFVGRP 131
+RAG G++ + +++ + KG + VS HI +L G IL G P
Sbjct: 47 SRAGFAGSISKATSLSAIKG-------KEHSRVSTHIGEFDRVLGGGIVKGSVILVGGDP 99
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--QH 189
G+GK++++ +I LS QK+V+ V G+ + A+ A R+ + + +L
Sbjct: 100 GIGKSSILLQIMSFLS--LQKKVLYVS------GEESLEQIAL-RAERLNLAKDNLLVMC 150
Query: 190 KVMIEAVENHM----PEVIIVDEIGT 211
+ IE + ++M PEV+++D I T
Sbjct: 151 ETNIEQIASYMVEHKPEVVVIDSIQT 176
>gi|454438|gb|AAA53625.1| LON gene of S. cerevisiae is downstream of the HAP 3 gene; Putative
ATP-binding motif bp 1960 to bp 1986.; Putative
catalytic site serine of serine proteases from bp 3109
to bp 3111 [Saccharomyces cerevisiae]
Length = 1133
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|373119042|ref|ZP_09533155.1| hypothetical protein HMPREF0995_03991 [Lachnospiraceae bacterium
7_1_58FAA]
gi|371665623|gb|EHO30786.1| hypothetical protein HMPREF0995_03991 [Lachnospiraceae bacterium
7_1_58FAA]
Length = 458
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 34/151 (22%), Positives = 64/151 (42%), Gaps = 27/151 (17%)
Query: 103 RVGRAVSGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSN- 161
R G A + +D + +L +G SI G G GKTT+M I + +E KR+ ++
Sbjct: 192 RYGTATAEMLDFLAAVLRFGLSICVTGSTGSGKTTLMSWILSTIPNE--KRIFTIENGCR 249
Query: 162 -----EIGGDGDIPHSAIGTARRMQ-VPEPSLQHKVMIEAVENHMPEVIIVDEIG----- 210
+ +G++ ++ + T R P+ + + ++E P+V+ V E+
Sbjct: 250 EFDLVKEDAEGNVLNNVVHTVTRFSDDPKQNYDQERLLEFALTCDPDVVCVGEMKSAEAF 309
Query: 211 -------------TEAEAHACRSIAERGVML 228
T A++C++ R V L
Sbjct: 310 AAQEAARTGHAVITTTHANSCKATYYRMVTL 340
>gi|283768971|ref|ZP_06341877.1| endopeptidase La [Bulleidia extructa W1219]
gi|283104328|gb|EFC05705.1| endopeptidase La [Bulleidia extructa W1219]
Length = 760
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 20/38 (52%), Positives = 25/38 (65%), Gaps = 2/38 (5%)
Query: 115 VYDLLH--YGKSILFVGRPGVGKTTVMREIARVLSDEF 150
V DL H G +LFVG PG GKT+V + IAR L+ E+
Sbjct: 329 VMDLNHKQSGSILLFVGAPGTGKTSVGKSIARALNREY 366
>gi|365767048|gb|EHN08536.1| Pim1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1133
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 625 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 683
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 684 QALKKCQTQNP 694
>gi|340521762|gb|EGR51996.1| predicted protein [Trichoderma reesei QM6a]
Length = 1074
Score = 38.5 bits (88), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK + FVG PGVGKT++ + IAR L+ E+ + V + D + EI G G +P I
Sbjct: 590 GKILCFVGPPGVGKTSIGKSIARALNREYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 648
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 649 QALKKCQTENP 659
>gi|401626728|gb|EJS44653.1| pim1p [Saccharomyces arboricola H-6]
Length = 1138
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ +F + V + D + EI G G +P +
Sbjct: 628 GKIICFVGPPGVGKTSIGKSIARALNRKFFRFSVGGMTDVA-EIKGHRRTYIGALPGRVV 686
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 687 QALKKCQTQNP 697
>gi|380484843|emb|CCF39738.1| lon protease [Colletotrichum higginsianum]
Length = 1110
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 8/71 (11%)
Query: 122 GKSILFVGRPGVGKTTVMREIARVLSDEFQKRVV--IVDTSNEIGGD-----GDIPHSAI 174
GK I FVG PGVGKT++ + IAR L+ ++ + V + D + EI G G +P I
Sbjct: 589 GKIICFVGPPGVGKTSIGKSIARALNRQYYRFSVGGLTDVA-EIKGHRRTYVGALPGRII 647
Query: 175 GTARRMQVPEP 185
++ Q P
Sbjct: 648 QALKKCQTENP 658
>gi|385792324|ref|YP_005825300.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|328676470|gb|AEB27340.1| DNA repair protein RadA [Francisella cf. novicida Fx1]
Length = 456
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 26/146 (17%)
Query: 76 NRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH----YGKSILFVGRP 131
+RAG G++ + +++ + KG + VS HI +L G IL G P
Sbjct: 47 SRAGFAGSISKATSLSAIKG-------KEHSRVSTHIGEFDRVLGGGIVKGSVILVGGDP 99
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--QH 189
G+GK++++ +I LS QK+V+ V G+ + A+ A R+ + + +L
Sbjct: 100 GIGKSSILLQIMSFLS--LQKKVLYVS------GEESLEQIAL-RAERLNLAKDNLLVMC 150
Query: 190 KVMIEAVENHM----PEVIIVDEIGT 211
+ IE + ++M PEV+++D I T
Sbjct: 151 ETNIEQIASYMVEHKPEVVVIDSIQT 176
>gi|449908058|ref|ZP_21793471.1| putative ABC transporter, ATP-binding protein ComYA [Streptococcus
mutans OMZ175]
gi|449263210|gb|EMC60641.1| putative ABC transporter, ATP-binding protein ComYA [Streptococcus
mutans OMZ175]
Length = 313
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 38/170 (22%), Positives = 73/170 (42%), Gaps = 32/170 (18%)
Query: 126 LFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEP 185
LF G G GKT++M ++ ++ + K+V+ ++ EI D + ++Q+ E
Sbjct: 136 LFSGPVGSGKTSLMYQLVKLRFE--TKQVITIEDPVEIKQDNML---------QLQLNES 184
Query: 186 -SLQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIGTAHG---------- 234
+ + +I+ H P+++I+ EI + A A + G M+ T H
Sbjct: 185 IDMTYDNLIKLSLRHRPDILIIGEIRDKETARAVIRASLTGAMVFSTIHAKSIPGVYARM 244
Query: 235 -------EWLENIIKNPILSDLIGG---VDTVTLGDEEARARRCQKSILE 274
E L+N ++ + LIGG +D + A++ K I +
Sbjct: 245 LELGTSSEELQNALRGIVYQRLIGGGGIIDFAKGNYQNHSAKKWNKQIYD 294
>gi|423406330|ref|ZP_17383479.1| hypothetical protein ICY_01015 [Bacillus cereus BAG2X1-3]
gi|401660324|gb|EJS77806.1| hypothetical protein ICY_01015 [Bacillus cereus BAG2X1-3]
Length = 347
Score = 38.5 bits (88), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 113 DMVYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPH 171
+ + L Y +L F G G GKTT M + V+ +R+V ++ E DG +
Sbjct: 127 EKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEVMRKRKTRRIVTLEDPVEKRKDGLL-- 184
Query: 172 SAIGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 230
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++
Sbjct: 185 -------QIQINEKAGITYETGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMT 237
Query: 231 TAH 233
T H
Sbjct: 238 TLH 240
>gi|57340062|gb|AAW50018.1| hypothetical protein FTT0873 [synthetic construct]
Length = 491
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 72/146 (49%), Gaps = 26/146 (17%)
Query: 76 NRAGIEGTLHRISAIRSRKGAIVGLTCRVGRAVSGHIDMVYDLLH----YGKSILFVGRP 131
+RAG G++ + +++ + KG + VS HI +L G IL G P
Sbjct: 73 SRAGFAGSISKATSLSAIKG-------KEHSRVSTHIGEFDRVLGGGIVKGSVILVGGDP 125
Query: 132 GVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPHSAIGTARRMQVPEPSL--QH 189
G+GK++++ +I LS QK+V+ V G+ + A+ A R+ + + +L
Sbjct: 126 GIGKSSILLQIMSFLS--LQKKVLYVS------GEESLEQIAL-RAERLNLAKDNLLVMC 176
Query: 190 KVMIEAVENHM----PEVIIVDEIGT 211
+ IE + ++M PEV+++D I T
Sbjct: 177 ETNIEQIASYMVEHKPEVVVIDSIQT 202
>gi|112982853|ref|NP_001036917.1| replication factor C subunit 2 [Bombyx mori]
gi|54290087|dbj|BAD61055.1| RFC40 [Bombyx mori]
Length = 340
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 108 VSGHIDMVYDLLHYGKS-----ILFVGRPGVGKTTVMREIARV-LSDEFQKRVVIVDTSN 161
+ G+ D V L + K+ I+ G PGVGKTT + +ARV L F+ V+ ++ SN
Sbjct: 35 IVGNEDTVSRLAVFAKTGNAPNIIIAGPPGVGKTTTILCLARVLLGVSFKDAVLELNASN 94
Query: 162 EIGGDGDIPHSAIGTARRMQVPEPSLQHKVMI 193
+ G D+ + I + +V P +HK++I
Sbjct: 95 DRG--IDVVRNKIKMFAQQKVTLPPGRHKIVI 124
>gi|423395455|ref|ZP_17372656.1| hypothetical protein ICU_01149 [Bacillus cereus BAG2X1-1]
gi|401654866|gb|EJS72405.1| hypothetical protein ICU_01149 [Bacillus cereus BAG2X1-1]
Length = 347
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 113 DMVYDLLHYGKSIL-FVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGGDGDIPH 171
+ + L Y +L F G G GKTT M + V+ +R+V ++ E DG +
Sbjct: 127 EKLLSFLRYSHGLLVFTGPTGSGKTTTMYALLEVMRKRKTRRIVTLEDPVEKRKDGLL-- 184
Query: 172 SAIGTARRMQVPEPS-LQHKVMIEAVENHMPEVIIVDEIGTEAEAHACRSIAERGVMLIG 230
++Q+ E + + ++ ++A+ H P++I+V EI E A + G +++
Sbjct: 185 -------QIQINEKAGITYETGLKAILRHDPDIILVGEIRDEETAKIAVRASLTGHLVMT 237
Query: 231 TAH 233
T H
Sbjct: 238 TLH 240
>gi|325662703|ref|ZP_08151300.1| hypothetical protein HMPREF0490_02040 [Lachnospiraceae bacterium
4_1_37FAA]
gi|325471042|gb|EGC74269.1| hypothetical protein HMPREF0490_02040 [Lachnospiraceae bacterium
4_1_37FAA]
Length = 783
Score = 38.5 bits (88), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%)
Query: 109 SGHIDMVYDLLHYGKSILFVGRPGVGKTTVMREIARVLSDEFQKRVVIVDTSNEIGG 165
+ H + DL+H G +I+ G P GKTT+M ++A + E K ++ T +E+
Sbjct: 310 TQHYKKIADLIHSGSNIIVTGIPASGKTTLMMQLASGIESEKPKHLLYTPTVSEVNN 366
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.321 0.139 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,374,399,893
Number of Sequences: 23463169
Number of extensions: 224567230
Number of successful extensions: 925914
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 675
Number of HSP's successfully gapped in prelim test: 1062
Number of HSP's that attempted gapping in prelim test: 923884
Number of HSP's gapped (non-prelim): 1860
length of query: 337
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 194
effective length of database: 9,003,962,200
effective search space: 1746768666800
effective search space used: 1746768666800
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 77 (34.3 bits)