Query 019704
Match_columns 337
No_of_seqs 206 out of 1519
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 03:52:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019704.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019704hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1282 Serine carboxypeptidas 100.0 4E-89 8.7E-94 669.4 25.6 309 22-337 22-338 (454)
2 PLN02209 serine carboxypeptida 100.0 5.4E-75 1.2E-79 573.5 28.7 299 20-337 15-329 (437)
3 PLN03016 sinapoylglucose-malat 100.0 4.4E-75 9.5E-80 574.0 26.4 292 25-337 18-325 (433)
4 PF00450 Peptidase_S10: Serine 100.0 2.2E-74 4.7E-79 566.3 19.9 290 34-337 1-304 (415)
5 PTZ00472 serine carboxypeptida 100.0 1.7E-67 3.7E-72 525.1 26.1 273 38-337 42-339 (462)
6 COG2939 Carboxypeptidase C (ca 100.0 7.4E-52 1.6E-56 403.2 13.6 259 57-336 86-371 (498)
7 PLN02213 sinapoylglucose-malat 100.0 1.2E-45 2.5E-50 352.9 17.0 203 115-337 1-211 (319)
8 KOG1283 Serine carboxypeptidas 100.0 4.4E-41 9.6E-46 309.1 10.3 185 44-234 4-193 (414)
9 TIGR03611 RutD pyrimidine util 98.5 3.9E-07 8.5E-12 81.8 8.7 107 70-209 11-117 (257)
10 TIGR01250 pro_imino_pep_2 prol 98.5 7.6E-07 1.6E-11 81.0 9.3 128 44-208 3-132 (288)
11 TIGR03056 bchO_mg_che_rel puta 98.4 2.9E-06 6.3E-11 77.7 10.7 108 69-209 25-132 (278)
12 PHA02857 monoglyceride lipase; 98.3 3.9E-06 8.4E-11 77.7 10.6 126 54-210 9-135 (276)
13 PLN02824 hydrolase, alpha/beta 98.3 3.9E-06 8.4E-11 78.6 10.1 123 47-207 12-137 (294)
14 PRK00870 haloalkane dehalogena 98.3 1.1E-05 2.5E-10 75.8 13.0 140 26-207 7-150 (302)
15 TIGR01249 pro_imino_pep_1 prol 98.3 6E-06 1.3E-10 78.2 10.2 125 45-208 6-131 (306)
16 PRK10673 acyl-CoA esterase; Pr 98.3 4.1E-06 8.9E-11 76.1 8.8 104 67-205 11-114 (255)
17 PF10340 DUF2424: Protein of u 98.1 5.6E-06 1.2E-10 80.4 7.2 133 57-211 105-239 (374)
18 PF12697 Abhydrolase_6: Alpha/ 98.1 6.5E-06 1.4E-10 71.6 7.0 104 75-210 1-104 (228)
19 PLN02298 hydrolase, alpha/beta 98.1 2.1E-05 4.6E-10 75.1 10.7 140 42-209 31-171 (330)
20 PLN02385 hydrolase; alpha/beta 98.1 2.3E-05 5E-10 75.6 10.2 128 54-208 70-198 (349)
21 PRK06489 hypothetical protein; 98.0 4.7E-05 1E-09 73.9 11.8 142 40-206 38-188 (360)
22 PRK03592 haloalkane dehalogena 98.0 3.6E-05 7.8E-10 72.1 10.5 104 72-209 27-130 (295)
23 TIGR02240 PHA_depoly_arom poly 98.0 3E-05 6.5E-10 71.9 9.6 117 55-208 11-127 (276)
24 PLN02894 hydrolase, alpha/beta 98.0 6.8E-05 1.5E-09 74.2 11.9 119 57-207 93-211 (402)
25 PRK03204 haloalkane dehalogena 98.0 6.4E-05 1.4E-09 70.5 10.8 121 45-207 16-136 (286)
26 PLN02578 hydrolase 98.0 6.8E-05 1.5E-09 72.6 11.2 112 55-206 75-186 (354)
27 TIGR03343 biphenyl_bphD 2-hydr 97.9 7.8E-05 1.7E-09 68.8 9.7 106 71-206 29-135 (282)
28 PLN02652 hydrolase; alpha/beta 97.9 0.00014 3.1E-09 71.7 11.8 127 54-209 119-247 (395)
29 KOG4409 Predicted hydrolase/ac 97.8 6.8E-05 1.5E-09 71.7 8.8 137 40-210 62-198 (365)
30 TIGR02427 protocat_pcaD 3-oxoa 97.8 4.7E-05 1E-09 67.4 7.4 104 69-206 10-113 (251)
31 PRK11126 2-succinyl-6-hydroxy- 97.8 6.5E-05 1.4E-09 67.7 7.9 100 72-206 2-101 (242)
32 PLN02679 hydrolase, alpha/beta 97.8 0.00019 4.2E-09 69.8 11.3 103 71-206 87-190 (360)
33 TIGR03695 menH_SHCHC 2-succiny 97.8 7.6E-05 1.7E-09 65.8 7.6 105 72-207 1-105 (251)
34 COG1506 DAP2 Dipeptidyl aminop 97.7 0.0001 2.2E-09 77.0 8.5 136 50-211 370-511 (620)
35 PRK10349 carboxylesterase BioH 97.7 8.4E-05 1.8E-09 67.9 7.1 95 73-206 14-108 (256)
36 PRK10749 lysophospholipase L2; 97.7 0.00018 3.9E-09 68.9 9.6 125 55-208 40-167 (330)
37 PLN03084 alpha/beta hydrolase 97.7 0.00023 5E-09 70.1 10.0 110 69-208 124-233 (383)
38 PLN03087 BODYGUARD 1 domain co 97.7 0.00042 9E-09 70.1 11.8 140 36-206 169-308 (481)
39 PRK05077 frsA fermentation/res 97.7 0.00019 4.2E-09 71.3 9.3 79 116-208 223-301 (414)
40 PLN02965 Probable pheophorbida 97.7 0.00013 2.8E-09 66.9 7.5 100 75-206 6-106 (255)
41 PRK14875 acetoin dehydrogenase 97.6 0.00031 6.8E-09 67.6 9.6 103 70-206 129-231 (371)
42 PLN02211 methyl indole-3-aceta 97.6 0.00032 6.9E-09 65.6 9.0 106 70-207 16-122 (273)
43 TIGR01738 bioH putative pimelo 97.5 0.0002 4.4E-09 63.2 6.6 96 72-206 4-99 (245)
44 TIGR01840 esterase_phb esteras 97.5 0.0005 1.1E-08 61.6 8.6 113 69-207 10-130 (212)
45 TIGR03101 hydr2_PEP hydrolase, 97.4 0.00094 2E-08 62.5 10.0 131 55-213 9-140 (266)
46 PLN02980 2-oxoglutarate decarb 97.3 0.0019 4.2E-08 74.4 11.9 107 69-206 1368-1479(1655)
47 PRK08775 homoserine O-acetyltr 97.2 0.0017 3.8E-08 62.4 9.6 77 114-208 98-174 (343)
48 TIGR02821 fghA_ester_D S-formy 97.2 0.0029 6.3E-08 59.1 10.8 42 164-210 135-176 (275)
49 PLN02511 hydrolase 97.2 0.0026 5.7E-08 62.6 10.4 135 46-209 74-212 (388)
50 COG3509 LpqC Poly(3-hydroxybut 97.1 0.013 2.9E-07 55.1 13.5 125 55-207 44-179 (312)
51 TIGR01607 PST-A Plasmodium sub 97.1 0.0037 8E-08 60.2 10.3 93 115-209 74-187 (332)
52 cd00707 Pancreat_lipase_like P 97.1 0.00083 1.8E-08 63.1 5.3 113 69-206 33-146 (275)
53 PF00561 Abhydrolase_1: alpha/ 97.1 0.00075 1.6E-08 59.4 4.8 74 117-206 2-78 (230)
54 PRK10566 esterase; Provisional 97.0 0.0029 6.2E-08 57.5 8.5 109 59-187 14-127 (249)
55 COG2267 PldB Lysophospholipase 97.0 0.0037 8E-08 59.5 9.4 125 55-210 19-145 (298)
56 PRK05855 short chain dehydroge 97.0 0.0026 5.6E-08 64.9 8.8 101 55-185 12-112 (582)
57 KOG1455 Lysophospholipase [Lip 97.0 0.0052 1.1E-07 57.9 9.5 129 54-207 36-164 (313)
58 COG0596 MhpC Predicted hydrola 96.9 0.0042 9.1E-08 54.0 8.2 104 72-208 21-124 (282)
59 PRK10985 putative hydrolase; P 96.9 0.0088 1.9E-07 57.2 11.0 128 55-209 41-170 (324)
60 KOG4178 Soluble epoxide hydrol 96.8 0.017 3.7E-07 55.1 11.7 124 41-204 20-145 (322)
61 KOG1515 Arylacetamide deacetyl 96.8 0.014 3E-07 56.5 11.2 145 43-210 61-210 (336)
62 TIGR03100 hydr1_PEP hydrolase, 96.8 0.0067 1.4E-07 56.6 8.7 79 116-209 58-136 (274)
63 PLN02442 S-formylglutathione h 96.7 0.0073 1.6E-07 56.8 8.9 55 148-210 127-181 (283)
64 PRK07581 hypothetical protein; 96.7 0.0069 1.5E-07 58.0 8.9 130 55-207 25-159 (339)
65 KOG2564 Predicted acetyltransf 96.6 0.0039 8.5E-08 58.1 6.0 107 70-204 72-179 (343)
66 PRK00175 metX homoserine O-ace 96.6 0.02 4.3E-07 56.1 10.9 137 55-207 32-182 (379)
67 TIGR03230 lipo_lipase lipoprot 96.5 0.0096 2.1E-07 59.6 8.2 80 115-206 73-153 (442)
68 PRK10162 acetyl esterase; Prov 96.4 0.012 2.6E-07 56.2 8.2 61 148-209 136-197 (318)
69 PLN00021 chlorophyllase 96.3 0.0085 1.8E-07 57.4 6.3 114 69-208 49-167 (313)
70 PF06500 DUF1100: Alpha/beta h 96.2 0.0097 2.1E-07 58.8 6.2 82 114-209 217-298 (411)
71 PRK10115 protease 2; Provision 96.2 0.013 2.8E-07 62.0 7.4 141 50-212 421-564 (686)
72 PF00326 Peptidase_S9: Prolyl 96.0 0.0056 1.2E-07 54.5 3.1 94 114-214 13-106 (213)
73 TIGR00976 /NonD putative hydro 95.9 0.031 6.7E-07 57.6 8.7 129 55-210 6-135 (550)
74 KOG2100 Dipeptidyl aminopeptid 95.8 0.038 8.3E-07 59.1 9.2 136 56-210 508-647 (755)
75 PF00975 Thioesterase: Thioest 95.6 0.058 1.3E-06 48.2 8.2 102 74-207 2-104 (229)
76 PF10503 Esterase_phd: Esteras 95.5 0.057 1.2E-06 49.2 7.9 40 163-207 93-132 (220)
77 PF12695 Abhydrolase_5: Alpha/ 95.3 0.034 7.5E-07 45.5 5.2 93 74-206 1-94 (145)
78 KOG1454 Predicted hydrolase/ac 95.2 0.067 1.5E-06 51.6 7.7 101 70-201 56-157 (326)
79 TIGR01392 homoserO_Ac_trn homo 95.2 0.18 3.8E-06 48.7 10.5 129 55-207 15-162 (351)
80 KOG4391 Predicted alpha/beta h 95.0 0.052 1.1E-06 49.1 5.6 130 48-209 57-186 (300)
81 COG0657 Aes Esterase/lipase [L 94.8 0.33 7.2E-06 45.9 11.1 51 166-217 151-201 (312)
82 PLN02872 triacylglycerol lipas 94.7 0.11 2.4E-06 51.4 7.8 140 25-182 19-175 (395)
83 PF05577 Peptidase_S28: Serine 94.7 0.19 4.2E-06 50.0 9.5 99 115-219 59-160 (434)
84 PF10230 DUF2305: Uncharacteri 94.5 0.19 4.1E-06 47.0 8.5 116 72-208 2-123 (266)
85 PRK11460 putative hydrolase; P 94.5 0.19 4.2E-06 45.7 8.3 52 150-207 87-138 (232)
86 cd00312 Esterase_lipase Estera 94.3 0.19 4.1E-06 50.7 8.7 37 148-185 158-194 (493)
87 KOG1838 Alpha/beta hydrolase [ 94.0 0.38 8.2E-06 47.5 9.8 109 69-207 122-236 (409)
88 COG4099 Predicted peptidase [G 93.5 0.98 2.1E-05 42.9 10.9 127 53-208 169-305 (387)
89 PF05990 DUF900: Alpha/beta hy 93.1 0.21 4.6E-06 45.7 6.0 61 147-210 76-140 (233)
90 PF07859 Abhydrolase_3: alpha/ 92.9 0.2 4.3E-06 44.1 5.3 45 164-209 68-112 (211)
91 PRK11071 esterase YqiA; Provis 92.7 0.23 4.9E-06 43.9 5.5 48 151-209 48-95 (190)
92 PF01764 Lipase_3: Lipase (cla 92.6 0.35 7.6E-06 39.7 6.1 59 146-207 46-106 (140)
93 PF00151 Lipase: Lipase; Inte 92.3 0.042 9.1E-07 53.1 0.3 103 69-190 68-173 (331)
94 KOG1552 Predicted alpha/beta h 92.0 0.77 1.7E-05 42.6 8.1 110 69-211 57-167 (258)
95 cd00741 Lipase Lipase. Lipase 91.9 0.52 1.1E-05 39.7 6.5 58 146-206 10-67 (153)
96 cd00519 Lipase_3 Lipase (class 91.1 0.57 1.2E-05 42.3 6.3 57 148-207 112-168 (229)
97 PF02230 Abhydrolase_2: Phosph 91.0 0.31 6.7E-06 43.6 4.4 57 147-210 87-143 (216)
98 PF05728 UPF0227: Uncharacteri 90.7 0.4 8.7E-06 42.5 4.8 41 166-214 58-98 (187)
99 PRK05371 x-prolyl-dipeptidyl a 90.2 0.63 1.4E-05 50.1 6.5 86 112-209 276-375 (767)
100 PLN02454 triacylglycerol lipas 90.1 0.82 1.8E-05 45.4 6.7 63 144-207 206-271 (414)
101 PRK13604 luxD acyl transferase 89.9 1.9 4.1E-05 41.2 8.8 125 54-209 18-143 (307)
102 PF02129 Peptidase_S15: X-Pro 89.2 0.39 8.5E-06 44.6 3.7 84 115-211 57-140 (272)
103 COG0400 Predicted esterase [Ge 87.0 2.7 5.9E-05 37.8 7.5 61 144-210 77-137 (207)
104 PRK06765 homoserine O-acetyltr 86.7 1.2 2.6E-05 43.9 5.5 51 148-206 144-195 (389)
105 COG2272 PnbA Carboxylesterase 86.5 1.8 3.8E-05 43.8 6.5 32 151-183 165-196 (491)
106 PF11144 DUF2920: Protein of u 85.9 1.5 3.3E-05 43.3 5.6 61 144-209 160-221 (403)
107 PF06057 VirJ: Bacterial virul 85.2 1.8 3.8E-05 38.5 5.2 65 141-209 45-109 (192)
108 PF11288 DUF3089: Protein of u 85.2 1.3 2.9E-05 39.8 4.5 43 147-191 77-119 (207)
109 PRK10252 entF enterobactin syn 84.8 4.8 0.0001 45.5 9.8 103 72-206 1068-1170(1296)
110 KOG4627 Kynurenine formamidase 84.7 0.68 1.5E-05 41.8 2.3 109 69-210 64-175 (270)
111 TIGR03502 lipase_Pla1_cef extr 84.0 2.9 6.4E-05 45.0 7.1 98 72-187 449-575 (792)
112 PLN02571 triacylglycerol lipas 83.7 2.9 6.3E-05 41.6 6.5 62 145-207 205-275 (413)
113 COG0429 Predicted hydrolase of 83.6 9.9 0.00021 36.7 9.7 120 55-206 60-185 (345)
114 PF05677 DUF818: Chlamydia CHL 82.4 2.9 6.3E-05 40.5 5.7 94 67-183 132-231 (365)
115 PF10081 Abhydrolase_9: Alpha/ 81.5 2.4 5.3E-05 39.9 4.8 36 144-179 86-121 (289)
116 PRK10439 enterobactin/ferric e 81.2 4.8 0.0001 40.1 7.1 36 167-207 288-323 (411)
117 PF06342 DUF1057: Alpha/beta h 79.6 14 0.00031 34.9 9.1 104 68-206 31-136 (297)
118 PRK04940 hypothetical protein; 78.0 3.6 7.7E-05 36.3 4.4 40 167-214 60-99 (180)
119 TIGR01836 PHA_synth_III_C poly 77.4 4.1 8.9E-05 39.2 5.2 54 149-210 121-174 (350)
120 PLN02733 phosphatidylcholine-s 77.4 5 0.00011 40.4 5.9 40 144-186 142-181 (440)
121 smart00824 PKS_TE Thioesterase 76.9 12 0.00025 31.9 7.5 76 115-205 25-100 (212)
122 PF03283 PAE: Pectinacetyleste 76.8 14 0.0003 36.2 8.7 147 57-208 36-198 (361)
123 PRK14567 triosephosphate isome 76.1 8 0.00017 36.0 6.4 61 144-210 178-238 (253)
124 PRK14566 triosephosphate isome 75.7 7.5 0.00016 36.3 6.1 62 143-210 187-248 (260)
125 PLN02847 triacylglycerol lipas 75.7 5.8 0.00013 41.2 5.8 52 150-204 237-288 (633)
126 PLN02324 triacylglycerol lipas 75.1 8.1 0.00017 38.5 6.5 45 145-190 194-238 (415)
127 PLN02753 triacylglycerol lipas 73.9 8.9 0.00019 39.3 6.6 65 143-207 286-359 (531)
128 PLN02310 triacylglycerol lipas 73.7 7.9 0.00017 38.5 6.0 62 146-207 187-249 (405)
129 PLN02719 triacylglycerol lipas 72.5 9.3 0.0002 39.0 6.3 63 145-207 274-345 (518)
130 TIGR01838 PHA_synth_I poly(R)- 71.3 20 0.00043 37.0 8.6 85 116-210 221-305 (532)
131 KOG4569 Predicted lipase [Lipi 70.9 8.3 0.00018 37.3 5.5 55 149-206 156-212 (336)
132 PLN02408 phospholipase A1 70.5 11 0.00025 36.8 6.3 46 145-191 179-224 (365)
133 PF08237 PE-PPE: PE-PPE domain 70.2 14 0.00031 33.6 6.5 58 144-206 30-89 (225)
134 KOG2182 Hydrolytic enzymes of 69.8 19 0.00042 36.6 7.7 69 142-215 147-215 (514)
135 PLN02802 triacylglycerol lipas 69.7 11 0.00023 38.6 6.0 60 146-206 310-370 (509)
136 COG4425 Predicted membrane pro 69.5 7.3 0.00016 39.1 4.7 37 143-179 373-409 (588)
137 PLN00413 triacylglycerol lipas 69.5 5.9 0.00013 40.1 4.1 39 149-190 269-307 (479)
138 KOG3975 Uncharacterized conser 69.3 16 0.00034 34.1 6.5 49 143-200 91-140 (301)
139 PLN02934 triacylglycerol lipas 68.3 7.5 0.00016 39.6 4.6 40 148-190 305-344 (515)
140 KOG2281 Dipeptidyl aminopeptid 68.2 11 0.00024 39.5 5.8 111 70-211 640-766 (867)
141 PF08538 DUF1749: Protein of u 67.8 14 0.00029 35.4 6.0 71 141-211 81-152 (303)
142 COG4782 Uncharacterized protei 67.8 10 0.00023 37.0 5.3 46 166-211 190-238 (377)
143 PF05448 AXE1: Acetyl xylan es 65.9 17 0.00038 34.8 6.5 47 156-208 164-210 (320)
144 PF11187 DUF2974: Protein of u 65.9 18 0.00038 33.0 6.2 52 149-205 70-121 (224)
145 PLN03037 lipase class 3 family 65.5 14 0.00031 37.7 6.0 58 148-205 298-357 (525)
146 PF05057 DUF676: Putative seri 65.2 12 0.00026 33.6 5.0 48 144-192 56-103 (217)
147 PLN02429 triosephosphate isome 64.3 18 0.00039 34.7 6.2 61 144-210 238-299 (315)
148 PF12740 Chlorophyllase2: Chlo 63.4 15 0.00032 34.4 5.2 63 143-207 63-131 (259)
149 PLN02162 triacylglycerol lipas 62.6 12 0.00026 37.9 4.7 39 149-190 263-301 (475)
150 PLN02561 triosephosphate isome 62.5 21 0.00045 33.3 6.1 61 143-209 178-239 (253)
151 PLN02761 lipase class 3 family 62.1 18 0.00039 37.1 6.0 62 145-206 269-341 (527)
152 PF07819 PGAP1: PGAP1-like pro 61.1 33 0.00071 31.1 7.1 62 145-210 61-127 (225)
153 PF06259 Abhydrolase_8: Alpha/ 59.9 17 0.00036 31.9 4.7 41 144-187 88-129 (177)
154 PF08840 BAAT_C: BAAT / Acyl-C 59.3 9.8 0.00021 34.1 3.3 46 155-206 10-55 (213)
155 KOG2984 Predicted hydrolase [G 58.7 12 0.00026 33.9 3.5 88 73-186 43-133 (277)
156 COG0627 Predicted esterase [Ge 57.7 39 0.00084 32.5 7.2 125 72-210 54-190 (316)
157 COG4757 Predicted alpha/beta h 56.6 19 0.0004 33.4 4.5 68 116-187 58-125 (281)
158 PF07849 DUF1641: Protein of u 55.7 5.2 0.00011 26.5 0.6 17 308-324 15-31 (42)
159 PF12146 Hydrolase_4: Putative 55.4 36 0.00079 25.4 5.3 78 56-155 2-79 (79)
160 KOG1516 Carboxylesterase and r 54.2 46 0.001 33.9 7.7 34 151-185 180-213 (545)
161 COG3208 GrsT Predicted thioest 52.4 55 0.0012 30.3 6.9 75 116-203 34-108 (244)
162 PF03583 LIP: Secretory lipase 51.8 45 0.00097 31.4 6.6 66 144-210 45-116 (290)
163 PF06821 Ser_hydrolase: Serine 51.7 23 0.00051 30.6 4.3 38 166-207 54-91 (171)
164 COG2945 Predicted hydrolase of 51.6 17 0.00038 32.5 3.4 76 118-208 63-138 (210)
165 COG3319 Thioesterase domains o 51.3 42 0.0009 31.3 6.1 104 73-208 1-104 (257)
166 PF02450 LCAT: Lecithin:choles 50.9 22 0.00048 35.0 4.5 24 166-189 118-141 (389)
167 PF00756 Esterase: Putative es 50.6 15 0.00033 32.9 3.1 54 148-210 100-153 (251)
168 PRK00042 tpiA triosephosphate 50.6 52 0.0011 30.5 6.6 61 143-210 178-239 (250)
169 PRK07868 acyl-CoA synthetase; 50.0 89 0.0019 34.7 9.5 40 166-209 140-179 (994)
170 PRK14565 triosephosphate isome 49.7 39 0.00085 31.1 5.6 54 143-210 172-225 (237)
171 cd00311 TIM Triosephosphate is 49.5 53 0.0011 30.3 6.5 60 144-210 175-235 (242)
172 KOG2183 Prolylcarboxypeptidase 49.1 26 0.00055 35.0 4.4 92 70-181 79-181 (492)
173 PTZ00333 triosephosphate isome 47.5 51 0.0011 30.7 6.1 61 143-209 181-242 (255)
174 KOG3079 Uridylate kinase/adeny 47.1 11 0.00024 33.4 1.5 15 71-85 6-20 (195)
175 KOG3967 Uncharacterized conser 46.7 88 0.0019 28.7 7.1 85 111-205 127-225 (297)
176 KOG3724 Negative regulator of 46.4 31 0.00066 37.2 4.8 38 144-181 153-196 (973)
177 PF01083 Cutinase: Cutinase; 45.1 49 0.0011 28.8 5.3 78 120-209 44-125 (179)
178 PF07519 Tannase: Tannase and 42.9 59 0.0013 33.1 6.2 52 152-212 104-155 (474)
179 PF05049 IIGP: Interferon-indu 42.3 11 0.00025 37.0 0.9 57 70-128 32-97 (376)
180 PF00135 COesterase: Carboxyle 41.9 21 0.00046 35.9 2.9 52 150-205 192-243 (535)
181 KOG2382 Predicted alpha/beta h 41.9 42 0.00092 32.2 4.7 61 117-187 82-142 (315)
182 PF05576 Peptidase_S37: PS-10 41.5 1.4E+02 0.0029 30.1 8.1 88 69-180 60-147 (448)
183 PF03403 PAF-AH_p_II: Platelet 40.2 20 0.00044 35.2 2.3 38 168-211 229-266 (379)
184 PF00121 TIM: Triosephosphate 40.1 16 0.00034 33.8 1.5 62 143-210 176-238 (244)
185 COG3545 Predicted esterase of 40.0 38 0.00082 29.8 3.7 36 166-206 58-93 (181)
186 PRK13962 bifunctional phosphog 39.8 59 0.0013 34.4 5.8 62 143-210 573-635 (645)
187 KOG2931 Differentiation-relate 39.7 1.6E+02 0.0034 28.3 8.0 94 111-221 74-167 (326)
188 KOG2369 Lecithin:cholesterol a 39.4 28 0.00061 35.1 3.2 45 146-190 160-205 (473)
189 PF03959 FSH1: Serine hydrolas 39.2 47 0.001 29.5 4.4 59 148-210 87-148 (212)
190 PRK10299 PhoPQ regulatory prot 39.2 21 0.00046 24.1 1.5 28 1-28 1-31 (47)
191 KOG2565 Predicted hydrolases o 38.7 37 0.0008 33.5 3.7 77 117-209 190-266 (469)
192 PF00681 Plectin: Plectin repe 38.0 21 0.00047 23.7 1.5 33 204-236 11-43 (45)
193 KOG2541 Palmitoyl protein thio 36.4 75 0.0016 30.0 5.2 93 69-190 21-115 (296)
194 PF06028 DUF915: Alpha/beta hy 36.4 94 0.002 28.9 6.0 58 143-206 82-143 (255)
195 KOG1553 Predicted alpha/beta h 35.6 87 0.0019 30.8 5.6 56 141-206 289-344 (517)
196 PF04446 Thg1: tRNAHis guanyly 35.3 44 0.00095 28.0 3.3 51 118-175 23-73 (135)
197 COG2819 Predicted hydrolase of 34.3 42 0.00091 31.4 3.3 54 148-207 114-172 (264)
198 PF07172 GRP: Glycine rich pro 33.8 40 0.00088 26.4 2.7 9 1-9 1-9 (95)
199 PF11466 Doppel: Prion-like pr 32.7 43 0.00092 20.4 2.0 19 5-23 8-26 (30)
200 PF15613 WHIM2: WSTF, HB1, Itc 31.5 93 0.002 20.1 3.6 27 56-83 11-38 (38)
201 COG3571 Predicted hydrolase of 31.4 61 0.0013 28.4 3.5 36 163-203 85-120 (213)
202 PLN02517 phosphatidylcholine-s 31.2 55 0.0012 34.3 3.8 22 166-187 212-233 (642)
203 PF09292 Neil1-DNA_bind: Endon 30.0 31 0.00068 22.2 1.2 13 71-83 23-35 (39)
204 PRK15492 triosephosphate isome 29.5 1.4E+02 0.0029 27.9 5.9 60 144-210 188-248 (260)
205 TIGR00419 tim triosephosphate 29.4 1.3E+02 0.0029 27.0 5.6 54 145-209 151-204 (205)
206 PF06309 Torsin: Torsin; Inte 28.5 48 0.001 27.5 2.3 17 69-85 49-65 (127)
207 PRK06762 hypothetical protein; 28.0 36 0.00077 28.7 1.6 13 73-85 2-14 (166)
208 KOG3877 NADH:ubiquinone oxidor 27.7 46 0.00099 31.7 2.3 50 112-179 67-116 (393)
209 PF01738 DLH: Dienelactone hyd 26.8 57 0.0012 28.7 2.8 46 154-205 85-130 (218)
210 PF07224 Chlorophyllase: Chlor 26.7 79 0.0017 29.9 3.7 37 167-206 120-156 (307)
211 PF04414 tRNA_deacylase: D-ami 26.6 1.8E+02 0.0039 26.3 6.0 48 141-191 104-152 (213)
212 PF15253 STIL_N: SCL-interrupt 26.6 92 0.002 31.1 4.3 35 43-80 200-235 (410)
213 PRK10949 protease 4; Provision 26.3 38 0.00083 35.7 1.8 68 116-203 115-185 (618)
214 KOG4540 Putative lipase essent 25.4 67 0.0015 30.7 3.0 23 163-185 272-294 (425)
215 COG5153 CVT17 Putative lipase 25.4 67 0.0015 30.7 3.0 23 163-185 272-294 (425)
216 COG3596 Predicted GTPase [Gene 24.6 72 0.0016 30.2 3.0 60 70-130 36-100 (296)
217 COG3946 VirJ Type IV secretory 24.5 1.3E+02 0.0029 30.0 5.0 49 140-191 302-350 (456)
218 COG0149 TpiA Triosephosphate i 24.4 2.5E+02 0.0055 26.1 6.6 67 125-210 171-238 (251)
219 PF05436 MF_alpha_N: Mating fa 23.9 2.7E+02 0.0058 21.5 5.5 36 38-79 32-67 (86)
220 COG1075 LipA Predicted acetylt 23.3 1.2E+02 0.0026 29.2 4.5 44 143-189 106-149 (336)
221 COG5510 Predicted small secret 22.2 1.2E+02 0.0026 20.3 2.8 18 3-20 3-20 (44)
222 smart00581 PSP proline-rich do 21.7 60 0.0013 22.8 1.4 18 315-332 10-27 (54)
223 KOG3101 Esterase D [General fu 20.2 1.1E+02 0.0023 28.2 3.0 40 166-210 140-179 (283)
No 1
>KOG1282 consensus Serine carboxypeptidases (lysosomal cathepsin A) [Posttranslational modification, protein turnover, chaperones; Amino acid transport and metabolism]
Probab=100.00 E-value=4e-89 Score=669.44 Aligned_cols=309 Identities=47% Similarity=0.875 Sum_probs=269.6
Q ss_pred ccCCCCCccccCCCCC-CCCcceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCC
Q 019704 22 KSVPQADKIISLPGQP-QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKP 100 (337)
Q Consensus 22 ~~~~~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~ 100 (337)
...+++++|+.|||++ +++|++|||||+|++..+++|||||+||+++|++|||||||||||||||++ |+|.|+|||++
T Consensus 22 ~~~~~~~~I~~LPG~~~~~~f~~ysGYv~v~~~~~~~LFYwf~eS~~~P~~dPlvLWLnGGPGCSSl~-G~~~E~GPf~v 100 (454)
T KOG1282|consen 22 HHVDEADLIKSLPGQPGPLPFKQYSGYVTVNESEGRQLFYWFFESENNPETDPLVLWLNGGPGCSSLG-GLFEENGPFRV 100 (454)
T ss_pred cccchhhhhhcCCCCCCCCCcccccceEECCCCCCceEEEEEEEccCCCCCCCEEEEeCCCCCccchh-hhhhhcCCeEE
Confidence 4677889999999998 589999999999999889999999999999999999999999999999996 99999999999
Q ss_pred CC--CccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeecccc
Q 019704 101 SG--DTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAG 178 (337)
Q Consensus 101 ~~--~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG 178 (337)
+. .+|..||||||+.||||||||||||||||+++..++. ++|+.+|+|++.||++||++||||++|+|||+||||||
T Consensus 101 ~~~G~tL~~N~ySWnk~aNiLfLd~PvGvGFSYs~~~~~~~-~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG 179 (454)
T KOG1282|consen 101 KYNGKTLYLNPYSWNKEANILFLDQPVGVGFSYSNTSSDYK-TGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAG 179 (454)
T ss_pred cCCCCcceeCCccccccccEEEEecCCcCCccccCCCCcCc-CCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccc
Confidence 64 3799999999999999999999999999999887774 78999999999999999999999999999999999999
Q ss_pred ccHHHHHHHHHHhcc-----ccccceEEEeCcccCcccccchhhhHhhhcCCCCchhhhHHHhhcchhHHHHhhhcCCCc
Q 019704 179 HYVPQLAQLIIQSNM-----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYASGSLT 253 (337)
Q Consensus 179 ~yvp~~a~~i~~~n~-----~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~~~ 253 (337)
||||+||++|++.|+ .|||||++||||++|+..|.+++.+|+|.||+|++++|+.+++.|+.... .-......+
T Consensus 180 ~YVP~La~~I~~~N~~~~~~~iNLkG~~IGNg~td~~~~~~~~~~~a~~h~liSde~~~~l~~~C~~~~~-~~~~~~~~~ 258 (454)
T KOG1282|consen 180 HYVPALAQEILKGNKKCCKPNINLKGYAIGNGLTDPEIDYNGRIPFAWGHGLISDELYESLKRACDFSSD-NYANVDPSN 258 (454)
T ss_pred eehHHHHHHHHhccccccCCcccceEEEecCcccCccccccchhhhhhhcccCCHHHHHHHHHHhccCcc-cccccCCch
Confidence 999999999999985 29999999999999999999999999999999999999999999987422 000011336
Q ss_pred hHHHHHHHHHHHHhccccccCcccCcCCcchhhhhhhhcccCCCCCCCCCCCchhHhhccCcHHHHHHhccCCCCccccc
Q 019704 254 AVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVEDETTKYLNRKDVQKALHAQLIGVTSWT 333 (337)
Q Consensus 254 ~~C~~~~~~~~~~i~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~YLN~~dVq~ALhV~~~~~~~W~ 333 (337)
..|.++++.......+.++.|+++.++|...... +.. .......++|..++.++|||+|+||+||||+....++|+
T Consensus 259 ~~C~~~~~~~~~~~~~~i~~y~i~~~~C~~~~~~---~~~-~~~~~~~~~c~~~~~~~ylN~~~VrkALh~~~~~~~~W~ 334 (454)
T KOG1282|consen 259 TKCNKAVEEFDSKTTGDIDNYYILTPDCYPTSYE---LKK-PTDCYGYDPCLSDYAEKYLNRPEVRKALHANKTSIGKWE 334 (454)
T ss_pred hHHHHHHHHHHHHHhccCchhhhcchhhcccccc---ccc-cccccccCCchhhhHHHhcCCHHHHHHhCCCCCCCCccc
Confidence 7899999988755555789999999999862110 011 112456789998777999999999999999875434799
Q ss_pred cCCC
Q 019704 334 VCSE 337 (337)
Q Consensus 334 ~Cs~ 337 (337)
.||+
T Consensus 335 ~Cn~ 338 (454)
T KOG1282|consen 335 RCND 338 (454)
T ss_pred ccCh
Confidence 9984
No 2
>PLN02209 serine carboxypeptidase
Probab=100.00 E-value=5.4e-75 Score=573.54 Aligned_cols=299 Identities=29% Similarity=0.591 Sum_probs=248.0
Q ss_pred hhccCCCCCccccCCCCC-CCCcceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCC
Q 019704 20 TAKSVPQADKIISLPGQP-QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPF 98 (337)
Q Consensus 20 ~~~~~~~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~ 98 (337)
...+.+..|+|++|||+. .+++++||||++|+++.+++|||||+||+++|+++||+|||||||||||+ .|+|.|+|||
T Consensus 15 ~~~~~~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lf~~f~es~~~~~~~Pl~lWlnGGPG~SS~-~g~f~e~GP~ 93 (437)
T PLN02209 15 SSHHVRSGSIVKFLPGFKGPLPFELETGYIGIGEEENVQFFYYFIKSDKNPQEDPLIIWLNGGPGCSCL-SGLFFENGPL 93 (437)
T ss_pred hcccCCccCeeecCCCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCCCCCCEEEEECCCCcHHHh-hhHHHhcCCc
Confidence 334667789999999995 68899999999998877889999999999999999999999999999999 6999999999
Q ss_pred CCCCC-------ccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEE
Q 019704 99 KPSGD-------TLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFI 171 (337)
Q Consensus 99 ~~~~~-------~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i 171 (337)
+++.+ ++++||+||++.|||||||||+||||||+.+...+ .+++++|+++++||+.||++||+|+++|+||
T Consensus 94 ~~~~~~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi 171 (437)
T PLN02209 94 ALKNKVYNGSVPSLVSTTYSWTKTANIIFLDQPVGSGFSYSKTPIER--TSDTSEVKKIHEFLQKWLIKHPQFLSNPFYV 171 (437)
T ss_pred eeccCCCCCCcccceeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhCccccCCCEEE
Confidence 98532 68899999999999999999999999998765443 3566678999999999999999999999999
Q ss_pred EeeccccccHHHHHHHHHHhcc-----ccccceEEEeCcccCcccccchhhhHhhhcCCCCchhhhHHHhhcchhHHHHh
Q 019704 172 TGESYAGHYVPQLAQLIIQSNM-----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQ 246 (337)
Q Consensus 172 ~GeSYgG~yvp~~a~~i~~~n~-----~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~ 246 (337)
+||||||||||.+|++|+++|+ +||||||+||||++||..|..++.+|+|.||+|++++|+.+++.|..... .
T Consensus 172 ~GESYaG~yvP~~a~~i~~~~~~~~~~~inl~Gi~igng~td~~~q~~~~~~y~~~~glI~~~~~~~~~~~c~~~~~-~- 249 (437)
T PLN02209 172 VGDSYSGMIVPALVHEISKGNYICCNPPINLQGYVLGNPITHIEFEQNFRIPYAHGMSLISDELYESLKRICKGNYF-S- 249 (437)
T ss_pred EecCcCceehHHHHHHHHhhcccccCCceeeeeEEecCcccChhhhhhhHHHHHhccCCCCHHHHHHHHHhcccccc-c-
Confidence 9999999999999999998874 49999999999999999999999999999999999999999999863110 0
Q ss_pred hhcCCCchHHHHHHHHHHHHhccccccCcccCcCCcchhhhhhhhcccCCCCCCCCCCCc---hhHhhccCcHHHHHHhc
Q 019704 247 YASGSLTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVE---DETTKYLNRKDVQKALH 323 (337)
Q Consensus 247 ~~~~~~~~~C~~~~~~~~~~i~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~C~~---~~~~~YLN~~dVq~ALh 323 (337)
..+.+..|.+++.++.... +.++.|++..+.|..... ......|.+ ..+..|||+|+||+|||
T Consensus 250 --~~~~~~~C~~~i~~~~~~~-~~~~~~~~~~~~c~~~~~-----------~~~~~~c~~~~~~~~~~ylN~~~V~~aL~ 315 (437)
T PLN02209 250 --VDPSNKKCLKLVEEYHKCT-DNINSHHTLIANCDDSNT-----------QHISPDCYYYPYHLVECWANNESVREALH 315 (437)
T ss_pred --CCCChHHHHHHHHHHHHHh-hcCCcccccccccccccc-----------ccCCCCcccccHHHHHHHhCCHHHHHHhC
Confidence 1123567988877654332 347778765566753210 011234643 34789999999999999
Q ss_pred cCCCCccccccCCC
Q 019704 324 AQLIGVTSWTVCSE 337 (337)
Q Consensus 324 V~~~~~~~W~~Cs~ 337 (337)
|+......|..|+.
T Consensus 316 v~~~~~~~w~~~~~ 329 (437)
T PLN02209 316 VDKGSIGEWIRDHR 329 (437)
T ss_pred CCCCCCCCCccccc
Confidence 98533457999973
No 3
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=100.00 E-value=4.4e-75 Score=574.00 Aligned_cols=292 Identities=30% Similarity=0.607 Sum_probs=246.1
Q ss_pred CCCCccccCCCCC-CCCcceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCC--
Q 019704 25 PQADKIISLPGQP-QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPS-- 101 (337)
Q Consensus 25 ~~~~~v~~lpg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~-- 101 (337)
.+.+.|++|||+. ..++++||||++|+++.+.++||||+||+++|+++||+|||||||||||+ .|+|+|+|||+++
T Consensus 18 ~~~~~v~~lpg~~~~~~~~~~sGy~~v~~~~~~~lfy~f~es~~~~~~~P~~lWlnGGPG~SS~-~g~~~e~GP~~~~~~ 96 (433)
T PLN03016 18 DSASIVKFLPGFEGPLPFELETGYIGIGEDENVQFFYYFIKSENNPKEDPLLIWLNGGPGCSCL-GGIIFENGPVGLKFE 96 (433)
T ss_pred cccCeeecCcCCCCCCCeeEEEEEEEecCCCCeEEEEEEEecCCCcccCCEEEEEcCCCcHHHH-HHHHHhcCCceeecc
Confidence 5668999999985 67899999999998777789999999999999999999999999999999 6999999999863
Q ss_pred ---C--CccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeecc
Q 019704 102 ---G--DTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESY 176 (337)
Q Consensus 102 ---~--~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSY 176 (337)
+ .+++.|++||++.|||||||||+||||||+.+...+ .+|+++|+++++||++||++||+|+++|+||+||||
T Consensus 97 ~~~~~~~~l~~n~~sW~~~anllfiDqPvGtGfSy~~~~~~~--~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESY 174 (433)
T PLN03016 97 VFNGSAPSLFSTTYSWTKMANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSY 174 (433)
T ss_pred ccCCCCCceeeCCCchhhcCcEEEecCCCCCCccCCCCCCCc--cCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCc
Confidence 2 268899999999999999999999999998765443 356677799999999999999999999999999999
Q ss_pred ccccHHHHHHHHHHhcc-----ccccceEEEeCcccCcccccchhhhHhhhcCCCCchhhhHHHhhcchhHHHHhhhcCC
Q 019704 177 AGHYVPQLAQLIIQSNM-----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYASGS 251 (337)
Q Consensus 177 gG~yvp~~a~~i~~~n~-----~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~ 251 (337)
||||||.+|++|+++|. +||||||+||||++||..|..++.+|+|+||+|++++|+.+++.|..... . ...
T Consensus 175 aG~yvP~la~~i~~~n~~~~~~~inLkGi~iGNg~t~~~~~~~~~~~y~~~~glI~~~~~~~i~~~c~~~~~--~--~~~ 250 (433)
T PLN03016 175 SGMIVPALVQEISQGNYICCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYY--N--VDP 250 (433)
T ss_pred cceehHHHHHHHHhhcccccCCcccceeeEecCCCcCchhhhhhHHHHHHhcCCCCHHHHHHHHHHhccccc--c--CCC
Confidence 99999999999999874 39999999999999999999999999999999999999999999964210 0 112
Q ss_pred CchHHHHHHHHHHHHhccccccCcccCcCCcchhhhhhhhcccCCCCCCCCCCCc---hhHhhccCcHHHHHHhccCCCC
Q 019704 252 LTAVCSQVISQVSREISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVE---DETTKYLNRKDVQKALHAQLIG 328 (337)
Q Consensus 252 ~~~~C~~~~~~~~~~i~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~C~~---~~~~~YLN~~dVq~ALhV~~~~ 328 (337)
....|..++..+.... +.+|.||++.+.|.... ...+.|.+ ..+++|||+++||+||||+...
T Consensus 251 ~~~~C~~~~~~~~~~~-~~~n~yni~~~~~~~~~-------------~~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~ 316 (433)
T PLN03016 251 SNTQCLKLTEEYHKCT-AKINIHHILTPDCDVTN-------------VTSPDCYYYPYHLIECWANDESVREALHIEKGS 316 (433)
T ss_pred chHHHHHHHHHHHHHh-cCCChhhccCCcccccc-------------cCCCcccccchHHHHHHhCCHHHHHHhCCCCCC
Confidence 3567998887654443 45899999866674210 01134653 3478999999999999998532
Q ss_pred ccccccCCC
Q 019704 329 VTSWTVCSE 337 (337)
Q Consensus 329 ~~~W~~Cs~ 337 (337)
...|..|++
T Consensus 317 ~~~w~~cn~ 325 (433)
T PLN03016 317 KGKWARCNR 325 (433)
T ss_pred CCCCccCCc
Confidence 347999984
No 4
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=100.00 E-value=2.2e-74 Score=566.33 Aligned_cols=290 Identities=41% Similarity=0.797 Sum_probs=227.2
Q ss_pred CCCC-CCCcceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCC--C-Ccccccc
Q 019704 34 PGQP-QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPS--G-DTLLRNE 109 (337)
Q Consensus 34 pg~~-~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~--~-~~~~~n~ 109 (337)
||+. .+++++|||||+|+++.+++|||||+||+++|+++||||||||||||||| +|+|+|+|||+++ + .+++.||
T Consensus 1 pg~~~~~~~~~~sGyl~~~~~~~~~lfyw~~~s~~~~~~~Pl~~wlnGGPG~SS~-~g~f~e~GP~~~~~~~~~~l~~n~ 79 (415)
T PF00450_consen 1 PGLDEPVPFKQYSGYLPVNDNENAHLFYWFFESRNDPEDDPLILWLNGGPGCSSM-WGLFGENGPFRINPDGPYTLEDNP 79 (415)
T ss_dssp TT-SS-SSSEEEEEEEEECTTTTEEEEEEEEE-SSGGCSS-EEEEEE-TTTB-TH-HHHHCTTSSEEEETTSTSEEEE-T
T ss_pred CCCCCCCCceEEEEEEecCCCCCcEEEEEEEEeCCCCCCccEEEEecCCceeccc-cccccccCceEEeecccccccccc
Confidence 6766 57899999999999888899999999999999999999999999999999 6999999999997 3 3799999
Q ss_pred ccchhhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHH
Q 019704 110 YSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLII 189 (337)
Q Consensus 110 ~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~ 189 (337)
+||++.+|||||||||||||||+.+...+ ..+++++|+++++||+.||++||+++++|+||+||||||||||.+|.+|+
T Consensus 80 ~sW~~~an~l~iD~PvGtGfS~~~~~~~~-~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~ 158 (415)
T PF00450_consen 80 YSWNKFANLLFIDQPVGTGFSYGNDPSDY-VWNDDQAAEDLYEFLQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYIL 158 (415)
T ss_dssp T-GGGTSEEEEE--STTSTT-EESSGGGG-S-SHHHHHHHHHHHHHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHH
T ss_pred cccccccceEEEeecCceEEeeccccccc-cchhhHHHHHHHHHHHHhhhhhhhccCCCEEEEccccccccchhhHHhhh
Confidence 99999999999999999999999876554 46899999999999999999999999999999999999999999999999
Q ss_pred Hhcc-----ccccceEEEeCcccCcccccchhhhHhhhcCCCCchhhhHHHhhcchhHHHHhhhcCCCchHHHHHHHHHH
Q 019704 190 QSNM-----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVS 264 (337)
Q Consensus 190 ~~n~-----~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~~~~~C~~~~~~~~ 264 (337)
++|. .||||||+||||++||..|..++.+|+|.||+|+++.++.+.+.|.... . .......|.++...+.
T Consensus 159 ~~~~~~~~~~inLkGi~IGng~~dp~~~~~s~~~~~~~~gli~~~~~~~~~~~~~~~~---~--~~~~~~~c~~~~~~~~ 233 (415)
T PF00450_consen 159 QQNKKGDQPKINLKGIAIGNGWIDPRIQYNSYADYAYYHGLIDDQQYDDLNKACEACP---Q--CQKAITECAAALDELS 233 (415)
T ss_dssp HHTCC--STTSEEEEEEEESE-SBHHHHHHHHHHHHHHTTSS-HHHHHHHHHHHTTSH---S--SSCCHHHHHHHHHHHH
T ss_pred hccccccccccccccceecCccccccccceeecccccccCcccHHHHHHHHHHhhccc---c--ccchhhHHHHHHHhhh
Confidence 9986 4999999999999999999999999999999999999999999886431 1 1134568888877765
Q ss_pred HH-----hccccccCcccCcCCcchhhhhhhhcccCCCCCCCCCCCchhHhhccCcHHHHHHhccCCCCccccccCCC
Q 019704 265 RE-----ISRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVEDETTKYLNRKDVQKALHAQLIGVTSWTVCSE 337 (337)
Q Consensus 265 ~~-----i~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~C~~~~~~~YLN~~dVq~ALhV~~~~~~~W~~Cs~ 337 (337)
.. ...++|+||++.++|..+. .........+++....+..|||+++||+||||+.....+|+.|++
T Consensus 234 ~~~~~~~~~~~~n~Ydi~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~yln~~~Vr~aL~v~~~~~~~w~~~~~ 304 (415)
T PF00450_consen 234 CQYAISQCNGGINPYDIRQPCYNPSR-------SSYDNSPSNDPPDDDYLEAYLNRPDVREALHVPVDSNVNWQSCND 304 (415)
T ss_dssp HHCHHHHHHTTSETTSTTSEETT-SH-------CTTCCCCTTTTTCHHHHHHHHTSHHHHHHTT-STTTSSS--SB-H
T ss_pred hhcccccccCCcceeeeecccccccc-------ccccccccccccchhhHHHHhccHHHHHhhCCCcccCCcccccCc
Confidence 42 2347999999976443110 000011122233345689999999999999997423358999973
No 5
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=100.00 E-value=1.7e-67 Score=525.11 Aligned_cols=273 Identities=32% Similarity=0.670 Sum_probs=227.7
Q ss_pred CCCcceEEEEEEecC-CCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCC--ccccccccchh
Q 019704 38 QASFQQYAGYITIDE-KQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGD--TLLRNEYSWNK 114 (337)
Q Consensus 38 ~~~~~~~sGyl~v~~-~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~--~~~~n~~sW~~ 114 (337)
+.++++|+|||+|++ ..+++||||||||+++|+++||+|||||||||||+ +|+|+|+|||+++.+ +++.||+||++
T Consensus 42 ~~~~~~~sGy~~v~~~~~~~~lFyw~~~s~~~~~~~Pl~lwlnGGPG~ss~-~G~f~E~GP~~i~~~~~~~~~n~~sW~~ 120 (462)
T PTZ00472 42 DPSVNQWSGYFDIPGNQTDKHYFYWAFGPRNGNPEAPVLLWMTGGPGCSSM-FALLAENGPCLMNETTGDIYNNTYSWNN 120 (462)
T ss_pred CCCCcceeEEEEeCCCCCCceEEEEEEEcCCCCCCCCEEEEECCCCcHHHH-HhhhccCCCeEEeCCCCceeECCccccc
Confidence 567899999999975 45789999999999999999999999999999999 799999999999654 78999999999
Q ss_pred hccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc
Q 019704 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK 194 (337)
Q Consensus 115 ~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~ 194 (337)
.+||||||||+||||||+... .+ ..+++++|+|+++||+.||++||+++++|+||+||||||+|+|.+|.+|+++|++
T Consensus 121 ~~~~l~iDqP~G~G~S~~~~~-~~-~~~~~~~a~d~~~~l~~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~ 198 (462)
T PTZ00472 121 EAYVIYVDQPAGVGFSYADKA-DY-DHNESEVSEDMYNFLQAFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKK 198 (462)
T ss_pred ccCeEEEeCCCCcCcccCCCC-CC-CCChHHHHHHHHHHHHHHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccc
Confidence 999999999999999998653 33 3567889999999999999999999999999999999999999999999988742
Q ss_pred -----cccceEEEeCcccCcccccchhhhHhhh-------cCCCCchhhhHHHh---hcchhHHHHhhhc--CCCchHHH
Q 019704 195 -----LNLKGIAIGNPLLEFNTDFNSRAEFLWS-------HGLISDSTYDIFTR---VCNYSQIRRQYAS--GSLTAVCS 257 (337)
Q Consensus 195 -----inLkGi~igng~~d~~~~~~~~~~~~~~-------~gli~~~~~~~~~~---~C~~~~~~~~~~~--~~~~~~C~ 257 (337)
||||||+||||++||..|+.++.+|+|+ +|+|++++|+.+.+ .|. +.+..|.. ......|.
T Consensus 199 ~~~~~inLkGi~IGNg~~dp~~q~~~~~~~a~~~~~~~~~~~li~~~~~~~~~~~~~~c~--~~~~~c~~~~~~~~~~c~ 276 (462)
T PTZ00472 199 GDGLYINLAGLAVGNGLTDPYTQYASYPRLAWDWCKEKLGAPCVSEEAYDEMSSMVPACQ--KKIKECNSNPDDADSSCS 276 (462)
T ss_pred cCCceeeeEEEEEeccccChhhhcccHHHHhhhcccccCCCCccCHHHHHHHHHHHHHHH--HHHHhccccCCCcchHHH
Confidence 9999999999999999999999999996 58999999998875 353 22222221 11234566
Q ss_pred HHHHHHHHHh----ccccccCcccCcCCcchhhhhhhhcccCCCCCCCCCCCc-hhHhhccCcHHHHHHhccCCCCcccc
Q 019704 258 QVISQVSREI----SRFVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVE-DETTKYLNRKDVQKALHAQLIGVTSW 332 (337)
Q Consensus 258 ~~~~~~~~~i----~~~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~C~~-~~~~~YLN~~dVq~ALhV~~~~~~~W 332 (337)
.+...|...+ ..++|.|||+.+ |. .++|.+ ..+.+|||+|+||+||||+. ..|
T Consensus 277 ~a~~~c~~~~~~~~~~g~n~Ydi~~~-c~------------------~~~c~~~~~~~~yLN~~~Vq~AL~v~~---~~w 334 (462)
T PTZ00472 277 VARALCNEYIAVYSATGLNNYDIRKP-CI------------------GPLCYNMDNTIAFMNREDVQSSLGVKP---ATW 334 (462)
T ss_pred HHHHHHHHHHHHHHhcCCChhheecc-CC------------------CCCccCHHHHHHHhCCHHHHHHhCCCC---CCc
Confidence 5554443211 235899999964 63 245765 45899999999999999973 379
Q ss_pred ccCCC
Q 019704 333 TVCSE 337 (337)
Q Consensus 333 ~~Cs~ 337 (337)
+.|++
T Consensus 335 ~~c~~ 339 (462)
T PTZ00472 335 QSCNM 339 (462)
T ss_pred eeCCH
Confidence 99984
No 6
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=100.00 E-value=7.4e-52 Score=403.20 Aligned_cols=259 Identities=25% Similarity=0.515 Sum_probs=203.5
Q ss_pred eEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCC-cccc--ccccchhhccccccccCccccccccc
Q 019704 57 ALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGD-TLLR--NEYSWNKEANMLYLESPAGVGFSYSA 133 (337)
Q Consensus 57 ~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~-~~~~--n~~sW~~~an~l~iDqP~g~GfSy~~ 133 (337)
.+|||+++++++|+++|+||||||||||||+ .|+|.|+||++|+.+ +... ||+||++++||||||||+|||||++.
T Consensus 86 ~~ffy~fe~~ndp~~rPvi~wlNGGPGcSS~-~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~ 164 (498)
T COG2939 86 FFFFYTFESPNDPANRPVIFWLNGGPGCSSV-TGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRAL 164 (498)
T ss_pred eEEEEEecCCCCCCCCceEEEecCCCChHhh-hhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCccccc
Confidence 3889999999999999999999999999999 699999999999666 5555 99999999999999999999999973
Q ss_pred cCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCC--ceEEEeeccccccHHHHHHHHHHhcc----ccccceEEEeCc-c
Q 019704 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNR--EFFITGESYAGHYVPQLAQLIIQSNM----KLNLKGIAIGNP-L 206 (337)
Q Consensus 134 ~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~--~~~i~GeSYgG~yvp~~a~~i~~~n~----~inLkGi~igng-~ 206 (337)
.... ..+-..+.+|+..|++.||+.||++.+. |+||+||||||+|+|.+|..|+++|. .+||++++|||| +
T Consensus 165 ~~e~--~~d~~~~~~D~~~~~~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~~~~~~~~~~nlssvligng~~ 242 (498)
T COG2939 165 GDEK--KKDFEGAGKDVYSFLRLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLEDNIALNGNVNLSSVLIGNGLW 242 (498)
T ss_pred cccc--ccchhccchhHHHHHHHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHHhccccCCceEeeeeeecCCcc
Confidence 2222 3355667799999999999999999877 99999999999999999999999843 399999999999 9
Q ss_pred cCcccccchhhhHhhhcC----CCCchhhhHHHhhcchhHH---HHhhhcCCCchHHHHHHHHHHHHh-----c---ccc
Q 019704 207 LEFNTDFNSRAEFLWSHG----LISDSTYDIFTRVCNYSQI---RRQYASGSLTAVCSQVISQVSREI-----S---RFV 271 (337)
Q Consensus 207 ~d~~~~~~~~~~~~~~~g----li~~~~~~~~~~~C~~~~~---~~~~~~~~~~~~C~~~~~~~~~~i-----~---~~i 271 (337)
|||.+|+..|..++..++ ..+.+.++.+.+.|..... ++.+........|..+...|.... . +..
T Consensus 243 t~Pl~~~~~y~~~a~~~~~~~~~l~~e~~~~~~~~~~~d~~~~l~~g~~~~~~~~~c~~~~~~~~~~~~~~~~r~~~~~~ 322 (498)
T COG2939 243 TDPLTQYLTYEPIAAEKGPYDGVLSSEECTKAEKYCAGDYCLALMKGCYDSGSLQPCENASAYLTGLMREYVGRAGGRLL 322 (498)
T ss_pred cChhHHHHHhhhhHhhcCCCCCcCcHHHHHHHHHHhhhhhHhhhccCCCCchhhhHHHHHHHHHHhcchhhhcccccccc
Confidence 999999999999998654 4556667777777765221 112222223456877766664322 1 237
Q ss_pred ccCcccCcCCcchhhhhhhhcccCCCCCCCCCCCch--hHhhccCcHHHHHHhccCCCCccccccCC
Q 019704 272 DTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVED--ETTKYLNRKDVQKALHAQLIGVTSWTVCS 336 (337)
Q Consensus 272 n~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~C~~~--~~~~YLN~~dVq~ALhV~~~~~~~W~~Cs 336 (337)
|.||++. .|.... -.-.|++. ...+|+|...+|++++... ..|..|+
T Consensus 323 n~y~~r~-~~~d~g--------------~~~~~y~~~~~~ld~~~~~~~~~~~~~~~---d~~~~c~ 371 (498)
T COG2939 323 NVYDIRE-ECRDPG--------------LGGSCYDTLSTSLDYFNFDPEQEVNDPEV---DNISGCT 371 (498)
T ss_pred ccccchh-hcCCCC--------------cccccccceeeccccccccchhccccccc---cchhccc
Confidence 8999886 464210 01246653 4788999999999987653 4788886
No 7
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=100.00 E-value=1.2e-45 Score=352.90 Aligned_cols=203 Identities=27% Similarity=0.497 Sum_probs=163.4
Q ss_pred hccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc-
Q 019704 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM- 193 (337)
Q Consensus 115 ~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~- 193 (337)
.|||||||||+||||||+++...+ .+|+++|+|++.||+.||++||+|+++||||+||||||||||.+|++|++.|.
T Consensus 1 ~aNvLfiDqPvGvGfSy~~~~~~~--~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~ 78 (319)
T PLN02213 1 MANIIFLDQPVGSGFSYSKTPIDK--TGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYI 78 (319)
T ss_pred CccEEEecCCCCCCCCCCCCCCCc--cccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhccc
Confidence 489999999999999998765443 35667779999999999999999999999999999999999999999999874
Q ss_pred ----ccccceEEEeCcccCcccccchhhhHhhhcCCCCchhhhHHHhhcchhHHHHhhhcCCCchHHHHHHHHHHHHhcc
Q 019704 194 ----KLNLKGIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTRVCNYSQIRRQYASGSLTAVCSQVISQVSREISR 269 (337)
Q Consensus 194 ----~inLkGi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~~C~~~~~~~~~~~~~~~~~C~~~~~~~~~~i~~ 269 (337)
+||||||+|||||+||..|..++.+|+|.||+|++++++.+++.|..... . .......|.+++....... +
T Consensus 79 ~~~~~inLkGi~IGNg~t~~~~~~~~~~~~~~~~gli~~~~~~~~~~~c~~~~~--~--~~~~~~~c~~~~~~~~~~~-~ 153 (319)
T PLN02213 79 CCEPPINLQGYMLGNPVTYMDFEQNFRIPYAYGMGLISDEIYEPMKRICNGNYY--N--VDPSNTQCLKLTEEYHKCT-A 153 (319)
T ss_pred ccCCceeeeEEEeCCCCCCccccchhHhhHHHhcCCCCHHHHHHHHHhcCCCcc--C--CCCCcHHHHHHHHHHHHHH-h
Confidence 39999999999999999999999999999999999999999999863210 0 0123467998877654433 3
Q ss_pred ccccCcccCcCCcchhhhhhhhcccCCCCCCCCCCCc---hhHhhccCcHHHHHHhccCCCCccccccCCC
Q 019704 270 FVDTYDVTLDVCLPSVLLQSKMLSQLQDKEEIDVCVE---DETTKYLNRKDVQKALHAQLIGVTSWTVCSE 337 (337)
Q Consensus 270 ~in~Ydi~~~~C~~~~~~~~~~~~~~~~~~~~~~C~~---~~~~~YLN~~dVq~ALhV~~~~~~~W~~Cs~ 337 (337)
.+|.||++.+.|.... . ..+.|.+ ..+.+|||+++||+||||+......|+.|++
T Consensus 154 ~~~~~~~~~~~~~~~~-----------~--~~~~c~~~~~~~~~~ylN~~~V~~aL~v~~~~~~~w~~c~~ 211 (319)
T PLN02213 154 KINIHHILTPDCDVTN-----------V--TSPDCYYYPYHLIECWANDESVREALHIEKGSKGKWARCNR 211 (319)
T ss_pred cCCHhhcccCcccCcc-----------C--CCCCcccchhHHHHHHhCCHHHHHHhCcCCCCCCCCccCCc
Confidence 5899999865564210 0 1135653 3579999999999999997532247999984
No 8
>KOG1283 consensus Serine carboxypeptidases [Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=4.4e-41 Score=309.11 Aligned_cols=185 Identities=31% Similarity=0.591 Sum_probs=167.1
Q ss_pred EEEEEEecCCCCceEEEEEeeccCC-CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccc
Q 019704 44 YAGYITIDEKQQRALFYYFVEAATE-AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLE 122 (337)
Q Consensus 44 ~sGyl~v~~~~~~~lfy~f~~s~~~-~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iD 122 (337)
--||++++. +.++|+|.+-+..+ ...+|+.||++||||+||.++|.|+|+||...+ +.+|+.+|.+.|+|||||
T Consensus 4 ~wg~v~vr~--~a~~F~wly~~~~~~ks~~pl~lwlqGgpGaSstG~GNFeE~GPl~~~---~~~r~~TWlk~adllfvD 78 (414)
T KOG1283|consen 4 DWGYVDVRT--GAHMFWWLYYATANVKSERPLALWLQGGPGASSTGFGNFEELGPLDLD---GSPRDWTWLKDADLLFVD 78 (414)
T ss_pred cccceeeec--CceEEEEEeeeccccccCCCeeEEecCCCCCCCcCccchhhcCCcccC---CCcCCchhhhhccEEEec
Confidence 368999974 57999998876544 478999999999999999999999999999876 567999999999999999
Q ss_pred cCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc----ccccc
Q 019704 123 SPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM----KLNLK 198 (337)
Q Consensus 123 qP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~----~inLk 198 (337)
.|||+||||.+..+.| ++++++.|.|+.+.|++||..||||+..|+||+-|||||+.++.+|..+.+.-+ +.|+.
T Consensus 79 nPVGaGfSyVdg~~~Y-~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l~~aIk~G~i~~nf~ 157 (414)
T KOG1283|consen 79 NPVGAGFSYVDGSSAY-TTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALELDDAIKRGEIKLNFI 157 (414)
T ss_pred CCCcCceeeecCcccc-cccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhHHHHHhcCceeecce
Confidence 9999999999888777 688999999999999999999999999999999999999999999999876533 37999
Q ss_pred eEEEeCcccCcccccchhhhHhhhcCCCCchhhhHH
Q 019704 199 GIAIGNPLLEFNTDFNSRAEFLWSHGLISDSTYDIF 234 (337)
Q Consensus 199 Gi~igng~~d~~~~~~~~~~~~~~~gli~~~~~~~~ 234 (337)
|+++|+.||+|..-..+..+|+++.+++++...+..
T Consensus 158 ~VaLGDSWISP~D~V~SWGP~L~~~S~LDD~GLds~ 193 (414)
T KOG1283|consen 158 GVALGDSWISPEDFVFSWGPLLKHVSRLDDNGLDSS 193 (414)
T ss_pred eEEccCcccChhHhhhcchHHHHhhhhhcccCccch
Confidence 999999999999888999999999999998776544
No 9
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=98.51 E-value=3.9e-07 Score=81.79 Aligned_cols=107 Identities=21% Similarity=0.186 Sum_probs=73.9
Q ss_pred CCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHH
Q 019704 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (337)
Q Consensus 70 ~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~ 149 (337)
++.|+||+++|.+|.+... ..+. .-+.+..+++-+|.| |.|.|-......+ +-++.+++
T Consensus 11 ~~~~~iv~lhG~~~~~~~~-~~~~----------------~~l~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~~~~ 69 (257)
T TIGR03611 11 ADAPVVVLSSGLGGSGSYW-APQL----------------DVLTQRFHVVTYDHR-GTGRSPGELPPGY---SIAHMADD 69 (257)
T ss_pred CCCCEEEEEcCCCcchhHH-HHHH----------------HHHHhccEEEEEcCC-CCCCCCCCCcccC---CHHHHHHH
Confidence 4679999999998877652 2110 123346799999999 9999964322222 34555666
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 150 ~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
+.++++. ....+++|+|+|+||..+..+|.+.-+ .++++++.+++.++
T Consensus 70 ~~~~i~~-------~~~~~~~l~G~S~Gg~~a~~~a~~~~~-----~v~~~i~~~~~~~~ 117 (257)
T TIGR03611 70 VLQLLDA-------LNIERFHFVGHALGGLIGLQLALRYPE-----RLLSLVLINAWSRP 117 (257)
T ss_pred HHHHHHH-------hCCCcEEEEEechhHHHHHHHHHHChH-----HhHHheeecCCCCC
Confidence 6666643 234579999999999999888875443 38899988887654
No 10
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=98.46 E-value=7.6e-07 Score=81.03 Aligned_cols=128 Identities=23% Similarity=0.252 Sum_probs=77.7
Q ss_pred EEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchh--hcccccc
Q 019704 44 YAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK--EANMLYL 121 (337)
Q Consensus 44 ~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~--~an~l~i 121 (337)
..++++++. ..+.|.-+. .+...|.||+++||||+++.....+ -...+ -.+++.+
T Consensus 3 ~~~~~~~~~---~~~~~~~~~---~~~~~~~vl~~hG~~g~~~~~~~~~-----------------~~~l~~~g~~vi~~ 59 (288)
T TIGR01250 3 IEGIITVDG---GYHLFTKTG---GEGEKIKLLLLHGGPGMSHEYLENL-----------------RELLKEEGREVIMY 59 (288)
T ss_pred ccceecCCC---CeEEEEecc---CCCCCCeEEEEcCCCCccHHHHHHH-----------------HHHHHhcCCEEEEE
Confidence 355666642 334443222 2234588899999999886522222 01112 4789999
Q ss_pred ccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEE
Q 019704 122 ESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIA 201 (337)
Q Consensus 122 DqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ 201 (337)
|.| |.|.|.......- ..+-+..++++..+++ . +..++++|+|+|+||..+..+|..-- -.+++++
T Consensus 60 d~~-G~G~s~~~~~~~~-~~~~~~~~~~~~~~~~----~---~~~~~~~liG~S~Gg~ia~~~a~~~p-----~~v~~lv 125 (288)
T TIGR01250 60 DQL-GCGYSDQPDDSDE-LWTIDYFVDELEEVRE----K---LGLDKFYLLGHSWGGMLAQEYALKYG-----QHLKGLI 125 (288)
T ss_pred cCC-CCCCCCCCCcccc-cccHHHHHHHHHHHHH----H---cCCCcEEEEEeehHHHHHHHHHHhCc-----cccceee
Confidence 999 9999864321110 0133444555544443 2 23456999999999998888886432 3488999
Q ss_pred EeCcccC
Q 019704 202 IGNPLLE 208 (337)
Q Consensus 202 igng~~d 208 (337)
+.++...
T Consensus 126 l~~~~~~ 132 (288)
T TIGR01250 126 ISSMLDS 132 (288)
T ss_pred Eeccccc
Confidence 8887653
No 11
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=98.37 E-value=2.9e-06 Score=77.67 Aligned_cols=108 Identities=17% Similarity=0.086 Sum_probs=71.5
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHH
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~ 148 (337)
+...|.||+++|.+|.+.. ...+.+ ...+..+++.+|.| |.|.|.......+ +-+..++
T Consensus 25 ~~~~~~vv~~hG~~~~~~~-~~~~~~----------------~l~~~~~vi~~D~~-G~G~S~~~~~~~~---~~~~~~~ 83 (278)
T TIGR03056 25 PTAGPLLLLLHGTGASTHS-WRDLMP----------------PLARSFRVVAPDLP-GHGFTRAPFRFRF---TLPSMAE 83 (278)
T ss_pred CCCCCeEEEEcCCCCCHHH-HHHHHH----------------HHhhCcEEEeecCC-CCCCCCCccccCC---CHHHHHH
Confidence 3456899999999887655 222100 12234789999999 9998854332122 4455666
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
++.++++. +..++++|+|+|+||..+..+|.+.. -.++++++.++..++
T Consensus 84 ~l~~~i~~-------~~~~~~~lvG~S~Gg~~a~~~a~~~p-----~~v~~~v~~~~~~~~ 132 (278)
T TIGR03056 84 DLSALCAA-------EGLSPDGVIGHSAGAAIALRLALDGP-----VTPRMVVGINAALMP 132 (278)
T ss_pred HHHHHHHH-------cCCCCceEEEECccHHHHHHHHHhCC-----cccceEEEEcCcccc
Confidence 76666653 22357899999999987777775432 237899998887654
No 12
>PHA02857 monoglyceride lipase; Provisional
Probab=98.33 E-value=3.9e-06 Score=77.69 Aligned_cols=126 Identities=13% Similarity=0.110 Sum_probs=82.4
Q ss_pred CCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhh-ccccccccCcccccccc
Q 019704 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKE-ANMLYLESPAGVGFSYS 132 (337)
Q Consensus 54 ~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~-an~l~iDqP~g~GfSy~ 132 (337)
.+..|++.+++.. +..+|+||.++|..+.|.. .-.+ -..+.+. ..++-+|.| |.|.|-.
T Consensus 9 ~g~~l~~~~~~~~--~~~~~~v~llHG~~~~~~~-~~~~----------------~~~l~~~g~~via~D~~-G~G~S~~ 68 (276)
T PHA02857 9 DNDYIYCKYWKPI--TYPKALVFISHGAGEHSGR-YEEL----------------AENISSLGILVFSHDHI-GHGRSNG 68 (276)
T ss_pred CCCEEEEEeccCC--CCCCEEEEEeCCCccccch-HHHH----------------HHHHHhCCCEEEEccCC-CCCCCCC
Confidence 3568888776664 3445999999999776655 2111 1124443 679999999 9999853
Q ss_pred ccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 133 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
.. ....+-....+|+..++..+.+.++ ..+++|+|+|.||..+..+|.+-. -+++|+++.+|.+++.
T Consensus 69 ~~---~~~~~~~~~~~d~~~~l~~~~~~~~---~~~~~lvG~S~GG~ia~~~a~~~p-----~~i~~lil~~p~~~~~ 135 (276)
T PHA02857 69 EK---MMIDDFGVYVRDVVQHVVTIKSTYP---GVPVFLLGHSMGATISILAAYKNP-----NLFTAMILMSPLVNAE 135 (276)
T ss_pred cc---CCcCCHHHHHHHHHHHHHHHHhhCC---CCCEEEEEcCchHHHHHHHHHhCc-----cccceEEEeccccccc
Confidence 21 1112223445677777765544443 568999999999987666664321 2489999999987643
No 13
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=98.30 E-value=3.9e-06 Score=78.57 Aligned_cols=123 Identities=16% Similarity=0.049 Sum_probs=79.9
Q ss_pred EEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCcc
Q 019704 47 YITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAG 126 (337)
Q Consensus 47 yl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g 126 (337)
|++++ +.+++|.- . ++ ..|.||++||.++.+.+. ..+. -.+.+..+++.+|.| |
T Consensus 12 ~~~~~---~~~i~y~~--~-G~--~~~~vlllHG~~~~~~~w-~~~~----------------~~L~~~~~vi~~Dlp-G 65 (294)
T PLN02824 12 TWRWK---GYNIRYQR--A-GT--SGPALVLVHGFGGNADHW-RKNT----------------PVLAKSHRVYAIDLL-G 65 (294)
T ss_pred eEEEc---CeEEEEEE--c-CC--CCCeEEEECCCCCChhHH-HHHH----------------HHHHhCCeEEEEcCC-C
Confidence 56664 34566542 2 11 237899999999988763 2221 124556799999999 9
Q ss_pred ccccccccCCCC---ccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEe
Q 019704 127 VGFSYSANKSFY---GSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (337)
Q Consensus 127 ~GfSy~~~~~~~---~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ig 203 (337)
.|.|-....... ...+-+..|+++.++|+.. ..++++|+|+|.||..+-.+|.+--+. ++++++.
T Consensus 66 ~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~p~~-----v~~lili 133 (294)
T PLN02824 66 YGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDV-------VGDPAFVICNSVGGVVGLQAAVDAPEL-----VRGVMLI 133 (294)
T ss_pred CCCCCCCccccccccccCCHHHHHHHHHHHHHHh-------cCCCeEEEEeCHHHHHHHHHHHhChhh-----eeEEEEE
Confidence 999964321100 0123445566666666532 246899999999999888887655443 8999999
Q ss_pred Cccc
Q 019704 204 NPLL 207 (337)
Q Consensus 204 ng~~ 207 (337)
|+..
T Consensus 134 ~~~~ 137 (294)
T PLN02824 134 NISL 137 (294)
T ss_pred CCCc
Confidence 8764
No 14
>PRK00870 haloalkane dehalogenase; Provisional
Probab=98.29 E-value=1.1e-05 Score=75.84 Aligned_cols=140 Identities=18% Similarity=0.233 Sum_probs=87.3
Q ss_pred CCCccccCCCCCCCCcceEEEEEEecCCCCc--eEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCC
Q 019704 26 QADKIISLPGQPQASFQQYAGYITIDEKQQR--ALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGD 103 (337)
Q Consensus 26 ~~~~v~~lpg~~~~~~~~~sGyl~v~~~~~~--~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~ 103 (337)
.+.++.+||..+ ..-.|+.++...+. .++|. +. +++ +.|.||.++|.|+.+... ..+.
T Consensus 7 ~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~i~y~--~~-G~~-~~~~lvliHG~~~~~~~w-~~~~---------- 66 (302)
T PRK00870 7 PDSRFENLPDYP-----FAPHYVDVDDGDGGPLRMHYV--DE-GPA-DGPPVLLLHGEPSWSYLY-RKMI---------- 66 (302)
T ss_pred CcccccCCcCCC-----CCceeEeecCCCCceEEEEEE--ec-CCC-CCCEEEEECCCCCchhhH-HHHH----------
Confidence 345677777654 34567888764444 46654 22 233 468899999998777652 2110
Q ss_pred ccccccccch-hhccccccccCccccccccccC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccH
Q 019704 104 TLLRNEYSWN-KEANMLYLESPAGVGFSYSANK-SFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYV 181 (337)
Q Consensus 104 ~~~~n~~sW~-~~an~l~iDqP~g~GfSy~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yv 181 (337)
. ... +..+++.+|.| |.|.|-.... ..+ +-+..++++.++|+ . ....++.|+|+|+||..+
T Consensus 67 ----~--~L~~~gy~vi~~Dl~-G~G~S~~~~~~~~~---~~~~~a~~l~~~l~----~---l~~~~v~lvGhS~Gg~ia 129 (302)
T PRK00870 67 ----P--ILAAAGHRVIAPDLI-GFGRSDKPTRREDY---TYARHVEWMRSWFE----Q---LDLTDVTLVCQDWGGLIG 129 (302)
T ss_pred ----H--HHHhCCCEEEEECCC-CCCCCCCCCCcccC---CHHHHHHHHHHHHH----H---cCCCCEEEEEEChHHHHH
Confidence 0 122 24789999999 9998842211 112 33445555555554 2 234589999999999988
Q ss_pred HHHHHHHHHhccccccceEEEeCccc
Q 019704 182 PQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 182 p~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
-.+|..--+ .++++++.++.+
T Consensus 130 ~~~a~~~p~-----~v~~lvl~~~~~ 150 (302)
T PRK00870 130 LRLAAEHPD-----RFARLVVANTGL 150 (302)
T ss_pred HHHHHhChh-----heeEEEEeCCCC
Confidence 888865433 388888887643
No 15
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=98.25 E-value=6e-06 Score=78.20 Aligned_cols=125 Identities=18% Similarity=0.308 Sum_probs=76.6
Q ss_pred EEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccch-hhcccccccc
Q 019704 45 AGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLES 123 (337)
Q Consensus 45 sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l~iDq 123 (337)
.+|+.+.+ +..++|+-. ..++ .|-||+++||||.++.. ... ..|. +..+++-+|.
T Consensus 6 ~~~~~~~~--~~~l~y~~~---g~~~-~~~lvllHG~~~~~~~~-~~~-----------------~~~~~~~~~vi~~D~ 61 (306)
T TIGR01249 6 SGYLNVSD--NHQLYYEQS---GNPD-GKPVVFLHGGPGSGTDP-GCR-----------------RFFDPETYRIVLFDQ 61 (306)
T ss_pred CCeEEcCC--CcEEEEEEC---cCCC-CCEEEEECCCCCCCCCH-HHH-----------------hccCccCCEEEEECC
Confidence 46787753 467777532 2233 34578899999876531 111 0121 3578999999
Q ss_pred CccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEe
Q 019704 124 PAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (337)
Q Consensus 124 P~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ig 203 (337)
| |.|.|..... .+ ..+..+.++++..++ +.. ...+++++|+||||..+-.+|.+--+ .++++++.
T Consensus 62 ~-G~G~S~~~~~-~~-~~~~~~~~~dl~~l~----~~l---~~~~~~lvG~S~GG~ia~~~a~~~p~-----~v~~lvl~ 126 (306)
T TIGR01249 62 R-GCGKSTPHAC-LE-ENTTWDLVADIEKLR----EKL---GIKNWLVFGGSWGSTLALAYAQTHPE-----VVTGLVLR 126 (306)
T ss_pred C-CCCCCCCCCC-cc-cCCHHHHHHHHHHHH----HHc---CCCCEEEEEECHHHHHHHHHHHHChH-----hhhhheee
Confidence 9 9999863221 11 122333444544443 333 23579999999999888777765443 27888888
Q ss_pred CcccC
Q 019704 204 NPLLE 208 (337)
Q Consensus 204 ng~~d 208 (337)
+..+.
T Consensus 127 ~~~~~ 131 (306)
T TIGR01249 127 GIFLL 131 (306)
T ss_pred ccccC
Confidence 77654
No 16
>PRK10673 acyl-CoA esterase; Provisional
Probab=98.25 E-value=4.1e-06 Score=76.08 Aligned_cols=104 Identities=15% Similarity=0.195 Sum_probs=74.4
Q ss_pred CCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHH
Q 019704 67 TEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIA 146 (337)
Q Consensus 67 ~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~ 146 (337)
.++.++|.||+++|.+|.+.. .+.+. ..+.+..+++.+|.| |-|.|... .. .+-++.
T Consensus 11 ~~~~~~~~iv~lhG~~~~~~~-~~~~~----------------~~l~~~~~vi~~D~~-G~G~s~~~--~~---~~~~~~ 67 (255)
T PRK10673 11 QNPHNNSPIVLVHGLFGSLDN-LGVLA----------------RDLVNDHDIIQVDMR-NHGLSPRD--PV---MNYPAM 67 (255)
T ss_pred CCCCCCCCEEEECCCCCchhH-HHHHH----------------HHHhhCCeEEEECCC-CCCCCCCC--CC---CCHHHH
Confidence 456778999999999988766 23221 123456799999999 89988532 22 244566
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCc
Q 019704 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (337)
Q Consensus 147 a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng 205 (337)
++|+.+++..+ ..++++|+|+|.||..+..+|.+.-+. ++++++.++
T Consensus 68 ~~d~~~~l~~l-------~~~~~~lvGhS~Gg~va~~~a~~~~~~-----v~~lvli~~ 114 (255)
T PRK10673 68 AQDLLDTLDAL-------QIEKATFIGHSMGGKAVMALTALAPDR-----IDKLVAIDI 114 (255)
T ss_pred HHHHHHHHHHc-------CCCceEEEEECHHHHHHHHHHHhCHhh-----cceEEEEec
Confidence 78888877642 335799999999999988888664443 888888764
No 17
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=98.13 E-value=5.6e-06 Score=80.37 Aligned_cols=133 Identities=23% Similarity=0.312 Sum_probs=81.2
Q ss_pred eEEEEEeec--cCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCcccccccccc
Q 019704 57 ALFYYFVEA--ATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (337)
Q Consensus 57 ~lfy~f~~s--~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~ 134 (337)
.-.||.+++ +.+|++||||+++||| |.+.+.=|+.+.. ..+-+..-+...||.+|-..-. | ...
T Consensus 105 ~~s~Wlvk~P~~~~pk~DpVlIYlHGG--------GY~l~~~p~qi~~---L~~i~~~l~~~SILvLDYsLt~--~-~~~ 170 (374)
T PF10340_consen 105 SQSYWLVKAPNRFKPKSDPVLIYLHGG--------GYFLGTTPSQIEF---LLNIYKLLPEVSILVLDYSLTS--S-DEH 170 (374)
T ss_pred cceEEEEeCCcccCCCCCcEEEEEcCC--------eeEecCCHHHHHH---HHHHHHHcCCCeEEEEeccccc--c-ccC
Confidence 346899885 3468889999999998 5555555654321 0111122223388888844222 0 001
Q ss_pred CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCccc
Q 019704 135 KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (337)
Q Consensus 135 ~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~ 211 (337)
...|. .. ..++.+..+...+.- ..+++.|.|+|-||+-+-.+.+++.+.+..+-=|.+++.+||+++..
T Consensus 171 ~~~yP--tQ---L~qlv~~Y~~Lv~~~---G~~nI~LmGDSAGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv~l~~ 239 (374)
T PF10340_consen 171 GHKYP--TQ---LRQLVATYDYLVESE---GNKNIILMGDSAGGNLALSFLQYLKKPNKLPYPKSAILISPWVNLVP 239 (374)
T ss_pred CCcCc--hH---HHHHHHHHHHHHhcc---CCCeEEEEecCccHHHHHHHHHHHhhcCCCCCCceeEEECCCcCCcC
Confidence 11221 11 122233333333222 24579999999999999999999877565455689999999999873
No 18
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=98.12 E-value=6.5e-06 Score=71.57 Aligned_cols=104 Identities=20% Similarity=0.288 Sum_probs=70.5
Q ss_pred EEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHHHHH
Q 019704 75 VLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFL 154 (337)
Q Consensus 75 ~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl 154 (337)
||+++|.+|.+... .-+. . .+.+..+++.+|.| |.|.|-.... +...+-++.++++.+++
T Consensus 1 vv~~hG~~~~~~~~-~~~~--------------~--~l~~~~~v~~~d~~-G~G~s~~~~~--~~~~~~~~~~~~l~~~l 60 (228)
T PF12697_consen 1 VVFLHGFGGSSESW-DPLA--------------E--ALARGYRVIAFDLP-GHGRSDPPPD--YSPYSIEDYAEDLAELL 60 (228)
T ss_dssp EEEE-STTTTGGGG-HHHH--------------H--HHHTTSEEEEEECT-TSTTSSSHSS--GSGGSHHHHHHHHHHHH
T ss_pred eEEECCCCCCHHHH-HHHH--------------H--HHhCCCEEEEEecC-Cccccccccc--cCCcchhhhhhhhhhcc
Confidence 68999999888652 2221 1 22367789999999 9999865332 11223455566666665
Q ss_pred HHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 155 EGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 155 ~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+ ... .++++|+|+|+||..+-.+|.+.-+ .++|+++.++.....
T Consensus 61 ~----~~~---~~~~~lvG~S~Gg~~a~~~a~~~p~-----~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 61 D----ALG---IKKVILVGHSMGGMIALRLAARYPD-----RVKGLVLLSPPPPLP 104 (228)
T ss_dssp H----HTT---TSSEEEEEETHHHHHHHHHHHHSGG-----GEEEEEEESESSSHH
T ss_pred c----ccc---ccccccccccccccccccccccccc-----ccccceeeccccccc
Confidence 5 332 2689999999999988888866433 499999999988643
No 19
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=98.10 E-value=2.1e-05 Score=75.05 Aligned_cols=140 Identities=16% Similarity=0.193 Sum_probs=84.6
Q ss_pred ceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchh-hccccc
Q 019704 42 QQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLY 120 (337)
Q Consensus 42 ~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~-~an~l~ 120 (337)
+...++++.. .+..++|+-.........+|+||++||..+.++-..-. -...+.+ -.+|+.
T Consensus 31 ~~~~~~~~~~--dg~~l~~~~~~~~~~~~~~~~VvllHG~~~~~~~~~~~----------------~~~~L~~~Gy~V~~ 92 (330)
T PLN02298 31 KGSKSFFTSP--RGLSLFTRSWLPSSSSPPRALIFMVHGYGNDISWTFQS----------------TAIFLAQMGFACFA 92 (330)
T ss_pred ccccceEEcC--CCCEEEEEEEecCCCCCCceEEEEEcCCCCCcceehhH----------------HHHHHHhCCCEEEE
Confidence 3446666653 36678875433222223568999999985333211000 0112444 479999
Q ss_pred cccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceE
Q 019704 121 LESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGI 200 (337)
Q Consensus 121 iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi 200 (337)
+|.| |.|.|-.. ..+ ..+-+..++|+..+++..... .++...+++|+|+|.||..+-.+|..-- -.++|+
T Consensus 93 ~D~r-GhG~S~~~--~~~-~~~~~~~~~D~~~~i~~l~~~-~~~~~~~i~l~GhSmGG~ia~~~a~~~p-----~~v~~l 162 (330)
T PLN02298 93 LDLE-GHGRSEGL--RAY-VPNVDLVVEDCLSFFNSVKQR-EEFQGLPRFLYGESMGGAICLLIHLANP-----EGFDGA 162 (330)
T ss_pred ecCC-CCCCCCCc--ccc-CCCHHHHHHHHHHHHHHHHhc-ccCCCCCEEEEEecchhHHHHHHHhcCc-----ccceeE
Confidence 9999 99988432 121 123455678888777754332 2333457999999999987765554211 248999
Q ss_pred EEeCcccCc
Q 019704 201 AIGNPLLEF 209 (337)
Q Consensus 201 ~igng~~d~ 209 (337)
++.+++.+.
T Consensus 163 vl~~~~~~~ 171 (330)
T PLN02298 163 VLVAPMCKI 171 (330)
T ss_pred EEecccccC
Confidence 999987653
No 20
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=98.07 E-value=2.3e-05 Score=75.60 Aligned_cols=128 Identities=14% Similarity=0.139 Sum_probs=79.7
Q ss_pred CCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchh-hccccccccCcccccccc
Q 019704 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGFSYS 132 (337)
Q Consensus 54 ~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~-~an~l~iDqP~g~GfSy~ 132 (337)
.+..+|+......+ ...+|+||++||..+.++...-.+ -..+.+ -.+++-+|.| |.|.|-.
T Consensus 70 ~g~~l~~~~~~p~~-~~~~~~iv~lHG~~~~~~~~~~~~----------------~~~l~~~g~~v~~~D~~-G~G~S~~ 131 (349)
T PLN02385 70 RGVEIFSKSWLPEN-SRPKAAVCFCHGYGDTCTFFFEGI----------------ARKIASSGYGVFAMDYP-GFGLSEG 131 (349)
T ss_pred CCCEEEEEEEecCC-CCCCeEEEEECCCCCccchHHHHH----------------HHHHHhCCCEEEEecCC-CCCCCCC
Confidence 35678875443221 235699999999766544311100 113443 4789999999 9998853
Q ss_pred ccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccC
Q 019704 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (337)
Q Consensus 133 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d 208 (337)
.. .+ ..+-+..++|+.++++.. ...+++...+++|+|+|+||..+-.+|.+-- -.++|+++.+|...
T Consensus 132 ~~--~~-~~~~~~~~~dv~~~l~~l-~~~~~~~~~~~~LvGhSmGG~val~~a~~~p-----~~v~glVLi~p~~~ 198 (349)
T PLN02385 132 LH--GY-IPSFDDLVDDVIEHYSKI-KGNPEFRGLPSFLFGQSMGGAVALKVHLKQP-----NAWDGAILVAPMCK 198 (349)
T ss_pred CC--CC-cCCHHHHHHHHHHHHHHH-HhccccCCCCEEEEEeccchHHHHHHHHhCc-----chhhheeEeccccc
Confidence 21 22 123345567777776643 3334555668999999999987766654322 23799999988654
No 21
>PRK06489 hypothetical protein; Provisional
Probab=98.04 E-value=4.7e-05 Score=73.88 Aligned_cols=142 Identities=14% Similarity=0.131 Sum_probs=75.5
Q ss_pred CcceEEEEEEecCCCCceEEEEEeeccC---CCCCCCEEEEEcCCCChhhhhh-hhcccCCCCCCCCCccc-cccccchh
Q 019704 40 SFQQYAGYITIDEKQQRALFYYFVEAAT---EAASKPLVLWLNGGPGCSSIGA-GAFCEHGPFKPSGDTLL-RNEYSWNK 114 (337)
Q Consensus 40 ~~~~~sGyl~v~~~~~~~lfy~f~~s~~---~~~~~Pl~lwlnGGPG~Ss~~~-g~~~e~GP~~~~~~~~~-~n~~sW~~ 114 (337)
++...+|. .++ +..++|.-..... ++.+.|.||.+||++|.+.... ..+. + .+. ....--.+
T Consensus 38 ~~~~~~~~-~~~---g~~i~y~~~G~~~~~~~~~~gpplvllHG~~~~~~~~~~~~~~---~------~l~~~~~~l~~~ 104 (360)
T PRK06489 38 DFTFHSGE-TLP---ELRLHYTTLGTPHRNADGEIDNAVLVLHGTGGSGKSFLSPTFA---G------ELFGPGQPLDAS 104 (360)
T ss_pred ceeccCCC-CcC---CceEEEEecCCCCcccccCCCCeEEEeCCCCCchhhhccchhH---H------HhcCCCCccccc
Confidence 34455664 232 4566665332100 1223688999999998664411 0000 0 000 00000134
Q ss_pred hccccccccCccccccccccCCC---CccCChHHHHHHHHHHHHHHHHHCCCCCCCce-EEEeeccccccHHHHHHHHHH
Q 019704 115 EANMLYLESPAGVGFSYSANKSF---YGSVNDAIAARDNLAFLEGWYEKFPEYKNREF-FITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 115 ~an~l~iDqP~g~GfSy~~~~~~---~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~-~i~GeSYgG~yvp~~a~~i~~ 190 (337)
..+++.+|.| |.|.|-...... ....+-+..++++..++. + ++.-.++ +|+|+|+||..+-.+|.+--+
T Consensus 105 ~~~Via~Dl~-GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~---~---~lgi~~~~~lvG~SmGG~vAl~~A~~~P~ 177 (360)
T PRK06489 105 KYFIILPDGI-GHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVT---E---GLGVKHLRLILGTSMGGMHAWMWGEKYPD 177 (360)
T ss_pred CCEEEEeCCC-CCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHH---H---hcCCCceeEEEEECHHHHHHHHHHHhCch
Confidence 5789999999 999885321110 001123344455444432 2 1222356 489999999888888766444
Q ss_pred hccccccceEEEeCcc
Q 019704 191 SNMKLNLKGIAIGNPL 206 (337)
Q Consensus 191 ~n~~inLkGi~igng~ 206 (337)
. ++++++.++.
T Consensus 178 ~-----V~~LVLi~s~ 188 (360)
T PRK06489 178 F-----MDALMPMASQ 188 (360)
T ss_pred h-----hheeeeeccC
Confidence 3 7888877764
No 22
>PRK03592 haloalkane dehalogenase; Provisional
Probab=98.03 E-value=3.6e-05 Score=72.06 Aligned_cols=104 Identities=17% Similarity=0.150 Sum_probs=72.3
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHH
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~ 151 (337)
.|.||+++|.|+.+... -.+ --.+.+...++-+|.| |.|.|-... ..+ +-...|+|+.
T Consensus 27 g~~vvllHG~~~~~~~w-~~~----------------~~~L~~~~~via~D~~-G~G~S~~~~-~~~---~~~~~a~dl~ 84 (295)
T PRK03592 27 GDPIVFLHGNPTSSYLW-RNI----------------IPHLAGLGRCLAPDLI-GMGASDKPD-IDY---TFADHARYLD 84 (295)
T ss_pred CCEEEEECCCCCCHHHH-HHH----------------HHHHhhCCEEEEEcCC-CCCCCCCCC-CCC---CHHHHHHHHH
Confidence 47899999999887663 211 0123445689999999 999985322 222 3455566666
Q ss_pred HHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 152 ~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
.+++. +..++++|+|+|.||..+-.+|.+--+. ++++++.|+...+
T Consensus 85 ~ll~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~p~~-----v~~lil~~~~~~~ 130 (295)
T PRK03592 85 AWFDA-------LGLDDVVLVGHDWGSALGFDWAARHPDR-----VRGIAFMEAIVRP 130 (295)
T ss_pred HHHHH-------hCCCCeEEEEECHHHHHHHHHHHhChhh-----eeEEEEECCCCCC
Confidence 66653 2346899999999999888888765543 8999999985543
No 23
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=98.02 E-value=3e-05 Score=71.94 Aligned_cols=117 Identities=15% Similarity=0.152 Sum_probs=74.4
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCcccccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~ 134 (337)
+..+.||..+. . ...|.||++||-++.+... ..+. . ...+..+++.+|.| |.|.|-..
T Consensus 11 ~~~~~~~~~~~--~-~~~~plvllHG~~~~~~~w-~~~~--------------~--~L~~~~~vi~~Dl~-G~G~S~~~- 68 (276)
T TIGR02240 11 GQSIRTAVRPG--K-EGLTPLLIFNGIGANLELV-FPFI--------------E--ALDPDLEVIAFDVP-GVGGSSTP- 68 (276)
T ss_pred CcEEEEEEecC--C-CCCCcEEEEeCCCcchHHH-HHHH--------------H--HhccCceEEEECCC-CCCCCCCC-
Confidence 45688876542 2 2346789999976666552 2110 0 12345799999999 99998422
Q ss_pred CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccC
Q 019704 135 KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (337)
Q Consensus 135 ~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d 208 (337)
...+ +-+..++++.+++.. . .-++++|+|+|+||..+-.+|.+--+ .++++++.|+...
T Consensus 69 ~~~~---~~~~~~~~~~~~i~~----l---~~~~~~LvG~S~GG~va~~~a~~~p~-----~v~~lvl~~~~~~ 127 (276)
T TIGR02240 69 RHPY---RFPGLAKLAARMLDY----L---DYGQVNAIGVSWGGALAQQFAHDYPE-----RCKKLILAATAAG 127 (276)
T ss_pred CCcC---cHHHHHHHHHHHHHH----h---CcCceEEEEECHHHHHHHHHHHHCHH-----HhhheEEeccCCc
Confidence 1122 233344555555543 2 23579999999999988888865443 3899999987653
No 24
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=97.98 E-value=6.8e-05 Score=74.16 Aligned_cols=119 Identities=12% Similarity=0.114 Sum_probs=74.0
Q ss_pred eEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCC
Q 019704 57 ALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKS 136 (337)
Q Consensus 57 ~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~ 136 (337)
.+...+++. +...|.||.++|.++.+... .- +-..+.+..+++-+|.| |.|.|-..
T Consensus 93 ~~~~~~~~~---~~~~p~vvllHG~~~~~~~~-~~----------------~~~~L~~~~~vi~~D~r-G~G~S~~~--- 148 (402)
T PLN02894 93 FINTVTFDS---KEDAPTLVMVHGYGASQGFF-FR----------------NFDALASRFRVIAIDQL-GWGGSSRP--- 148 (402)
T ss_pred eEEEEEecC---CCCCCEEEEECCCCcchhHH-HH----------------HHHHHHhCCEEEEECCC-CCCCCCCC---
Confidence 444444432 24569999999997765542 11 11224456789999999 99988321
Q ss_pred CCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 137 FYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 137 ~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
.+...+.++..+.+.+.+..|.+.. ...+++|+|+|+||..+-.+|.+-.+ .++++++.++..
T Consensus 149 ~~~~~~~~~~~~~~~~~i~~~~~~l---~~~~~~lvGhS~GG~la~~~a~~~p~-----~v~~lvl~~p~~ 211 (402)
T PLN02894 149 DFTCKSTEETEAWFIDSFEEWRKAK---NLSNFILLGHSFGGYVAAKYALKHPE-----HVQHLILVGPAG 211 (402)
T ss_pred CcccccHHHHHHHHHHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHhCch-----hhcEEEEECCcc
Confidence 1111122333344556666666543 23579999999999877777654322 388888888753
No 25
>PRK03204 haloalkane dehalogenase; Provisional
Probab=97.96 E-value=6.4e-05 Score=70.53 Aligned_cols=121 Identities=16% Similarity=0.233 Sum_probs=72.0
Q ss_pred EEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccC
Q 019704 45 AGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESP 124 (337)
Q Consensus 45 sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP 124 (337)
+.+++++ +..++|- +. + ..|.+|.++|.|..+... -.+ - ..+.+..+++-+|.|
T Consensus 16 ~~~~~~~---~~~i~y~--~~-G---~~~~iv~lHG~~~~~~~~-~~~---------------~-~~l~~~~~vi~~D~~ 69 (286)
T PRK03204 16 SRWFDSS---RGRIHYI--DE-G---TGPPILLCHGNPTWSFLY-RDI---------------I-VALRDRFRCVAPDYL 69 (286)
T ss_pred ceEEEcC---CcEEEEE--EC-C---CCCEEEEECCCCccHHHH-HHH---------------H-HHHhCCcEEEEECCC
Confidence 5567774 3456554 21 1 247899999998544431 111 0 123445799999999
Q ss_pred ccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeC
Q 019704 125 AGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGN 204 (337)
Q Consensus 125 ~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ign 204 (337)
|.|.|-......+ +-+..++++..++ +.. ...+++|+|+|+||..+-.+|..-- -.++++++++
T Consensus 70 -G~G~S~~~~~~~~---~~~~~~~~~~~~~----~~~---~~~~~~lvG~S~Gg~va~~~a~~~p-----~~v~~lvl~~ 133 (286)
T PRK03204 70 -GFGLSERPSGFGY---QIDEHARVIGEFV----DHL---GLDRYLSMGQDWGGPISMAVAVERA-----DRVRGVVLGN 133 (286)
T ss_pred -CCCCCCCCCcccc---CHHHHHHHHHHHH----HHh---CCCCEEEEEECccHHHHHHHHHhCh-----hheeEEEEEC
Confidence 9998842211111 2333444444444 332 3457999999999986555553322 2489999988
Q ss_pred ccc
Q 019704 205 PLL 207 (337)
Q Consensus 205 g~~ 207 (337)
+..
T Consensus 134 ~~~ 136 (286)
T PRK03204 134 TWF 136 (286)
T ss_pred ccc
Confidence 764
No 26
>PLN02578 hydrolase
Probab=97.95 E-value=6.8e-05 Score=72.63 Aligned_cols=112 Identities=15% Similarity=0.102 Sum_probs=71.8
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCcccccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~ 134 (337)
+.+++|.-.. +.|-+|.++|-++.+... ... -..+.+..+++.+|.| |.|.|-...
T Consensus 75 ~~~i~Y~~~g------~g~~vvliHG~~~~~~~w-~~~----------------~~~l~~~~~v~~~D~~-G~G~S~~~~ 130 (354)
T PLN02578 75 GHKIHYVVQG------EGLPIVLIHGFGASAFHW-RYN----------------IPELAKKYKVYALDLL-GFGWSDKAL 130 (354)
T ss_pred CEEEEEEEcC------CCCeEEEECCCCCCHHHH-HHH----------------HHHHhcCCEEEEECCC-CCCCCCCcc
Confidence 4566665322 235578999876654331 111 0113345789999999 888884321
Q ss_pred CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 135 KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 135 ~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
..| +.+..++++.+|++.. ...+++|+|+|+||..+..+|.+--+. ++++++.|+.
T Consensus 131 -~~~---~~~~~a~~l~~~i~~~-------~~~~~~lvG~S~Gg~ia~~~A~~~p~~-----v~~lvLv~~~ 186 (354)
T PLN02578 131 -IEY---DAMVWRDQVADFVKEV-------VKEPAVLVGNSLGGFTALSTAVGYPEL-----VAGVALLNSA 186 (354)
T ss_pred -ccc---CHHHHHHHHHHHHHHh-------ccCCeEEEEECHHHHHHHHHHHhChHh-----cceEEEECCC
Confidence 122 3444566777776642 246899999999999888888765543 8999988764
No 27
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=97.88 E-value=7.8e-05 Score=68.81 Aligned_cols=106 Identities=16% Similarity=0.171 Sum_probs=64.1
Q ss_pred CCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccc-hhhccccccccCccccccccccCCCCccCChHHHHHH
Q 019704 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (337)
Q Consensus 71 ~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW-~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~ 149 (337)
+.|.||+++|.++.+...--.+ .+-... .+..+++-+|.| |.|.|-.... +. ......+++
T Consensus 29 ~~~~ivllHG~~~~~~~~~~~~--------------~~~~~l~~~~~~vi~~D~~-G~G~S~~~~~-~~--~~~~~~~~~ 90 (282)
T TIGR03343 29 NGEAVIMLHGGGPGAGGWSNYY--------------RNIGPFVDAGYRVILKDSP-GFNKSDAVVM-DE--QRGLVNARA 90 (282)
T ss_pred CCCeEEEECCCCCchhhHHHHH--------------HHHHHHHhCCCEEEEECCC-CCCCCCCCcC-cc--cccchhHHH
Confidence 3477999999765443210000 000112 234899999999 9998843211 11 111123455
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 150 ~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+.++++. +..++++++|+|+||..+-.+|.+--+. ++++++.++.
T Consensus 91 l~~~l~~-------l~~~~~~lvG~S~Gg~ia~~~a~~~p~~-----v~~lvl~~~~ 135 (282)
T TIGR03343 91 VKGLMDA-------LDIEKAHLVGNSMGGATALNFALEYPDR-----IGKLILMGPG 135 (282)
T ss_pred HHHHHHH-------cCCCCeeEEEECchHHHHHHHHHhChHh-----hceEEEECCC
Confidence 5555543 2356899999999999999888755443 7788887764
No 28
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=97.86 E-value=0.00014 Score=71.74 Aligned_cols=127 Identities=22% Similarity=0.207 Sum_probs=81.7
Q ss_pred CCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccch-hhccccccccCcccccccc
Q 019704 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYS 132 (337)
Q Consensus 54 ~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l~iDqP~g~GfSy~ 132 (337)
.+..+|++...... .+.+|+||++||.++.+.. .-.+ -..+. +-.+++-+|.| |.|.|-.
T Consensus 119 ~~~~l~~~~~~p~~-~~~~~~Vl~lHG~~~~~~~-~~~~----------------a~~L~~~Gy~V~~~D~r-GhG~S~~ 179 (395)
T PLN02652 119 RRNALFCRSWAPAA-GEMRGILIIIHGLNEHSGR-YLHF----------------AKQLTSCGFGVYAMDWI-GHGGSDG 179 (395)
T ss_pred CCCEEEEEEecCCC-CCCceEEEEECCchHHHHH-HHHH----------------HHHHHHCCCEEEEeCCC-CCCCCCC
Confidence 34567776554432 3346899999998776554 1111 01232 24689999999 8898853
Q ss_pred ccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc-ccccceEEEeCcccCc
Q 019704 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM-KLNLKGIAIGNPLLEF 209 (337)
Q Consensus 133 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~-~inLkGi~igng~~d~ 209 (337)
. ..+ ..+.+..++|+..+++..-..+| ..+++|+|+|+||..+..+|. ..+ .-.++|+++.+|+++.
T Consensus 180 ~--~~~-~~~~~~~~~Dl~~~l~~l~~~~~---~~~i~lvGhSmGG~ial~~a~----~p~~~~~v~glVL~sP~l~~ 247 (395)
T PLN02652 180 L--HGY-VPSLDYVVEDTEAFLEKIRSENP---GVPCFLFGHSTGGAVVLKAAS----YPSIEDKLEGIVLTSPALRV 247 (395)
T ss_pred C--CCC-CcCHHHHHHHHHHHHHHHHHhCC---CCCEEEEEECHHHHHHHHHHh----ccCcccccceEEEECccccc
Confidence 2 122 22344556778778877666665 357999999999987765443 111 1258999999998754
No 29
>KOG4409 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=97.85 E-value=6.8e-05 Score=71.66 Aligned_cols=137 Identities=19% Similarity=0.322 Sum_probs=88.9
Q ss_pred CcceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhcccc
Q 019704 40 SFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANML 119 (337)
Q Consensus 40 ~~~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l 119 (337)
..+..+-|+.+.+. ... |.++-...+++++-++.+|| =|+++ |+| ..|=.+..+.-||-
T Consensus 62 ~v~~~~~~v~i~~~--~~i--w~~~~~~~~~~~~plVliHG-yGAg~---g~f-------------~~Nf~~La~~~~vy 120 (365)
T KOG4409|consen 62 PVPYSKKYVRIPNG--IEI--WTITVSNESANKTPLVLIHG-YGAGL---GLF-------------FRNFDDLAKIRNVY 120 (365)
T ss_pred CCCcceeeeecCCC--cee--EEEeecccccCCCcEEEEec-cchhH---HHH-------------HHhhhhhhhcCceE
Confidence 34444666766532 222 44444444466777788887 23332 232 23556777799999
Q ss_pred ccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccce
Q 019704 120 YLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKG 199 (337)
Q Consensus 120 ~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkG 199 (337)
.||.| |-|.|--.. + ..+.+..-+.+.+-+++|..... =.+.+|+|||+||......|..--++ ++-
T Consensus 121 aiDll-G~G~SSRP~---F-~~d~~~~e~~fvesiE~WR~~~~---L~KmilvGHSfGGYLaa~YAlKyPer-----V~k 187 (365)
T KOG4409|consen 121 AIDLL-GFGRSSRPK---F-SIDPTTAEKEFVESIEQWRKKMG---LEKMILVGHSFGGYLAAKYALKYPER-----VEK 187 (365)
T ss_pred Eeccc-CCCCCCCCC---C-CCCcccchHHHHHHHHHHHHHcC---CcceeEeeccchHHHHHHHHHhChHh-----hce
Confidence 99999 999884322 1 11222222478899999998763 34899999999998877777666655 778
Q ss_pred EEEeCcccCcc
Q 019704 200 IAIGNPLLEFN 210 (337)
Q Consensus 200 i~igng~~d~~ 210 (337)
++|.+||--+.
T Consensus 188 LiLvsP~Gf~~ 198 (365)
T KOG4409|consen 188 LILVSPWGFPE 198 (365)
T ss_pred EEEeccccccc
Confidence 89998885443
No 30
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=97.85 E-value=4.7e-05 Score=67.41 Aligned_cols=104 Identities=17% Similarity=0.180 Sum_probs=65.4
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHH
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~ 148 (337)
+..+|++|.++|-++.+.. ...+.| ...+..+++.+|.| |.|.|-... .. .+.+..++
T Consensus 10 ~~~~~~li~~hg~~~~~~~-~~~~~~----------------~l~~~~~v~~~d~~-G~G~s~~~~-~~---~~~~~~~~ 67 (251)
T TIGR02427 10 ADGAPVLVFINSLGTDLRM-WDPVLP----------------ALTPDFRVLRYDKR-GHGLSDAPE-GP---YSIEDLAD 67 (251)
T ss_pred CCCCCeEEEEcCcccchhh-HHHHHH----------------HhhcccEEEEecCC-CCCCCCCCC-CC---CCHHHHHH
Confidence 3367999999886544443 211100 12245799999999 999884221 11 24455566
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
++.++++.+ ...+++|+|+|+||..+-.+|.+-.+. ++++++.++.
T Consensus 68 ~~~~~i~~~-------~~~~v~liG~S~Gg~~a~~~a~~~p~~-----v~~li~~~~~ 113 (251)
T TIGR02427 68 DVLALLDHL-------GIERAVFCGLSLGGLIAQGLAARRPDR-----VRALVLSNTA 113 (251)
T ss_pred HHHHHHHHh-------CCCceEEEEeCchHHHHHHHHHHCHHH-----hHHHhhccCc
Confidence 666666532 245799999999999888887654332 6677766543
No 31
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=97.82 E-value=6.5e-05 Score=67.71 Aligned_cols=100 Identities=20% Similarity=0.183 Sum_probs=66.6
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHH
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~ 151 (337)
.|.||+++|.+|.+... -.+ . .. . +..+++.+|.| |.|.|.... ..+-+..|+++.
T Consensus 2 ~p~vvllHG~~~~~~~w-~~~-------------~-~~--l-~~~~vi~~D~~-G~G~S~~~~-----~~~~~~~~~~l~ 57 (242)
T PRK11126 2 LPWLVFLHGLLGSGQDW-QPV-------------G-EA--L-PDYPRLYIDLP-GHGGSAAIS-----VDGFADVSRLLS 57 (242)
T ss_pred CCEEEEECCCCCChHHH-HHH-------------H-HH--c-CCCCEEEecCC-CCCCCCCcc-----ccCHHHHHHHHH
Confidence 58899999999988662 211 1 11 1 24899999988 999884321 113344556666
Q ss_pred HHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 152 ~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+++.. +...+++++|+|+||..+-.+|.+... -.++++++.++.
T Consensus 58 ~~l~~-------~~~~~~~lvG~S~Gg~va~~~a~~~~~----~~v~~lvl~~~~ 101 (242)
T PRK11126 58 QTLQS-------YNILPYWLVGYSLGGRIAMYYACQGLA----GGLCGLIVEGGN 101 (242)
T ss_pred HHHHH-------cCCCCeEEEEECHHHHHHHHHHHhCCc----ccccEEEEeCCC
Confidence 55552 234689999999999888777765321 127888887755
No 32
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=97.80 E-value=0.00019 Score=69.76 Aligned_cols=103 Identities=19% Similarity=0.074 Sum_probs=65.8
Q ss_pred CCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHH
Q 019704 71 SKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDN 150 (337)
Q Consensus 71 ~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~ 150 (337)
..|.||.+||.++.+... .-+ -....+...++.+|.| |.|.|-......+ +-+..++++
T Consensus 87 ~gp~lvllHG~~~~~~~w-~~~----------------~~~L~~~~~via~Dl~-G~G~S~~~~~~~~---~~~~~a~~l 145 (360)
T PLN02679 87 SGPPVLLVHGFGASIPHW-RRN----------------IGVLAKNYTVYAIDLL-GFGASDKPPGFSY---TMETWAELI 145 (360)
T ss_pred CCCeEEEECCCCCCHHHH-HHH----------------HHHHhcCCEEEEECCC-CCCCCCCCCCccc---cHHHHHHHH
Confidence 347889999998877652 111 0123345789999999 9998843221122 334556666
Q ss_pred HHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHH-HHhccccccceEEEeCcc
Q 019704 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLI-IQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 151 ~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i-~~~n~~inLkGi~igng~ 206 (337)
.++|+. +...+++|+|+|+||..+-.+|..- -+ .++|+++.|+.
T Consensus 146 ~~~l~~-------l~~~~~~lvGhS~Gg~ia~~~a~~~~P~-----rV~~LVLi~~~ 190 (360)
T PLN02679 146 LDFLEE-------VVQKPTVLIGNSVGSLACVIAASESTRD-----LVRGLVLLNCA 190 (360)
T ss_pred HHHHHH-------hcCCCeEEEEECHHHHHHHHHHHhcChh-----hcCEEEEECCc
Confidence 666653 2245899999999997655544321 12 28899988864
No 33
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=97.78 E-value=7.6e-05 Score=65.78 Aligned_cols=105 Identities=22% Similarity=0.257 Sum_probs=65.9
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHH
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~ 151 (337)
+|.||.++|.+|.+.. +-.+ ... ..+-.+++-+|.| |.|.|-... .....+-++.++++
T Consensus 1 ~~~vv~~hG~~~~~~~-~~~~--------------~~~--L~~~~~v~~~d~~-g~G~s~~~~--~~~~~~~~~~~~~~- 59 (251)
T TIGR03695 1 KPVLVFLHGFLGSGAD-WQAL--------------IEL--LGPHFRCLAIDLP-GHGSSQSPD--EIERYDFEEAAQDI- 59 (251)
T ss_pred CCEEEEEcCCCCchhh-HHHH--------------HHH--hcccCeEEEEcCC-CCCCCCCCC--ccChhhHHHHHHHH-
Confidence 4889999998887765 2111 011 1244789999988 888884321 11111223334442
Q ss_pred HHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 152 ~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
+..+.+.. ..++++|+|+|+||..+..+|.+.-+ .++++++.++..
T Consensus 60 --~~~~~~~~---~~~~~~l~G~S~Gg~ia~~~a~~~~~-----~v~~lil~~~~~ 105 (251)
T TIGR03695 60 --LATLLDQL---GIEPFFLVGYSMGGRIALYYALQYPE-----RVQGLILESGSP 105 (251)
T ss_pred --HHHHHHHc---CCCeEEEEEeccHHHHHHHHHHhCch-----heeeeEEecCCC
Confidence 33333433 35689999999999988888876433 388898887754
No 34
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=97.72 E-value=0.0001 Score=77.01 Aligned_cols=136 Identities=15% Similarity=0.242 Sum_probs=85.0
Q ss_pred ecCCCCceEEEEEeeccC-CCCC-CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCcccccc-ccchhhccccccccCcc
Q 019704 50 IDEKQQRALFYYFVEAAT-EAAS-KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNE-YSWNKEANMLYLESPAG 126 (337)
Q Consensus 50 v~~~~~~~lfy~f~~s~~-~~~~-~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~-~sW~~~an~l~iDqP~g 126 (337)
+....+..+..|++.-.+ +|.+ -|+|++++||| ++. .|. ....+. .=+.+-..|++++-.--
T Consensus 370 ~~~~dG~~i~~~l~~P~~~~~~k~yP~i~~~hGGP--~~~-~~~------------~~~~~~q~~~~~G~~V~~~n~RGS 434 (620)
T COG1506 370 YKSNDGETIHGWLYKPPGFDPRKKYPLIVYIHGGP--SAQ-VGY------------SFNPEIQVLASAGYAVLAPNYRGS 434 (620)
T ss_pred EEcCCCCEEEEEEecCCCCCCCCCCCEEEEeCCCC--ccc-ccc------------ccchhhHHHhcCCeEEEEeCCCCC
Confidence 333345678888876543 3433 49999999999 444 230 001111 12455678899996655
Q ss_pred cccccc--cc-CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEe
Q 019704 127 VGFSYS--AN-KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (337)
Q Consensus 127 ~GfSy~--~~-~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ig 203 (337)
+||+.. .. ...+ .. ...+|+..++. |++..|.....++.|+|.||||. ++..++.+.. .+|..+..
T Consensus 435 ~GyG~~F~~~~~~~~---g~-~~~~D~~~~~~-~l~~~~~~d~~ri~i~G~SyGGy----mtl~~~~~~~--~f~a~~~~ 503 (620)
T COG1506 435 TGYGREFADAIRGDW---GG-VDLEDLIAAVD-ALVKLPLVDPERIGITGGSYGGY----MTLLAATKTP--RFKAAVAV 503 (620)
T ss_pred CccHHHHHHhhhhcc---CC-ccHHHHHHHHH-HHHhCCCcChHHeEEeccChHHH----HHHHHHhcCc--hhheEEec
Confidence 666532 11 1111 11 23478888998 99999998888999999999994 4444444322 37777777
Q ss_pred CcccCccc
Q 019704 204 NPLLEFNT 211 (337)
Q Consensus 204 ng~~d~~~ 211 (337)
.|.+|...
T Consensus 504 ~~~~~~~~ 511 (620)
T COG1506 504 AGGVDWLL 511 (620)
T ss_pred cCcchhhh
Confidence 77666543
No 35
>PRK10349 carboxylesterase BioH; Provisional
Probab=97.72 E-value=8.4e-05 Score=67.90 Aligned_cols=95 Identities=15% Similarity=0.077 Sum_probs=63.5
Q ss_pred CEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHHH
Q 019704 73 PLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLA 152 (337)
Q Consensus 73 Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~ 152 (337)
|.||.++|.++++... --+ -..+.+..+++.+|.| |.|.|-.. ..+ +-++.++++.+
T Consensus 14 ~~ivllHG~~~~~~~w-~~~----------------~~~L~~~~~vi~~Dl~-G~G~S~~~--~~~---~~~~~~~~l~~ 70 (256)
T PRK10349 14 VHLVLLHGWGLNAEVW-RCI----------------DEELSSHFTLHLVDLP-GFGRSRGF--GAL---SLADMAEAVLQ 70 (256)
T ss_pred CeEEEECCCCCChhHH-HHH----------------HHHHhcCCEEEEecCC-CCCCCCCC--CCC---CHHHHHHHHHh
Confidence 5699999988777663 111 1234567899999999 99988532 112 33334444332
Q ss_pred HHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 153 FLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 153 fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+...+++++|+|+||..+..+|.+-.+ .++++++.|+.
T Consensus 71 -----------~~~~~~~lvGhS~Gg~ia~~~a~~~p~-----~v~~lili~~~ 108 (256)
T PRK10349 71 -----------QAPDKAIWLGWSLGGLVASQIALTHPE-----RVQALVTVASS 108 (256)
T ss_pred -----------cCCCCeEEEEECHHHHHHHHHHHhChH-----hhheEEEecCc
Confidence 123579999999999988888764332 37889988763
No 36
>PRK10749 lysophospholipase L2; Provisional
Probab=97.72 E-value=0.00018 Score=68.94 Aligned_cols=125 Identities=16% Similarity=0.104 Sum_probs=77.6
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccch-hhccccccccCccccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSA 133 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l~iDqP~g~GfSy~~ 133 (337)
+..++|+.+... ..+|+||.++|-.+.+.. +.-+ . ..+. +-.+++-+|.| |.|.|-..
T Consensus 40 g~~l~~~~~~~~---~~~~~vll~HG~~~~~~~-y~~~---~-------------~~l~~~g~~v~~~D~~-G~G~S~~~ 98 (330)
T PRK10749 40 DIPIRFVRFRAP---HHDRVVVICPGRIESYVK-YAEL---A-------------YDLFHLGYDVLIIDHR-GQGRSGRL 98 (330)
T ss_pred CCEEEEEEccCC---CCCcEEEEECCccchHHH-HHHH---H-------------HHHHHCCCeEEEEcCC-CCCCCCCC
Confidence 467888765532 345899999998654433 1111 0 0122 34689999999 99998532
Q ss_pred cCCC-Cc-cCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccC
Q 019704 134 NKSF-YG-SVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (337)
Q Consensus 134 ~~~~-~~-~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d 208 (337)
.... .. ..+-+..++|+..+++...+.++ ..+++++|+|+||..+-.+|.+- . -.++|+++.+|...
T Consensus 99 ~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~---~~~~~l~GhSmGG~ia~~~a~~~---p--~~v~~lvl~~p~~~ 167 (330)
T PRK10749 99 LDDPHRGHVERFNDYVDDLAAFWQQEIQPGP---YRKRYALAHSMGGAILTLFLQRH---P--GVFDAIALCAPMFG 167 (330)
T ss_pred CCCCCcCccccHHHHHHHHHHHHHHHHhcCC---CCCeEEEEEcHHHHHHHHHHHhC---C--CCcceEEEECchhc
Confidence 1110 00 11334556777777776544433 56899999999998776666432 1 23789999998754
No 37
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=97.69 E-value=0.00023 Score=70.06 Aligned_cols=110 Identities=16% Similarity=0.162 Sum_probs=69.7
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHH
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~ 148 (337)
+...|.||.+||.|+.+...-.+. ....+..+++-+|.| |.|.|-......-...+-+..++
T Consensus 124 ~~~~~~ivllHG~~~~~~~w~~~~-----------------~~L~~~~~Via~Dlp-G~G~S~~p~~~~~~~ys~~~~a~ 185 (383)
T PLN03084 124 SNNNPPVLLIHGFPSQAYSYRKVL-----------------PVLSKNYHAIAFDWL-GFGFSDKPQPGYGFNYTLDEYVS 185 (383)
T ss_pred CCCCCeEEEECCCCCCHHHHHHHH-----------------HHHhcCCEEEEECCC-CCCCCCCCcccccccCCHHHHHH
Confidence 345689999999987765521111 113345799999999 99999543211000113445556
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccC
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d 208 (337)
++..+++. +...+++|+|+|+||..+-.+|.+--+ .++++++.|+...
T Consensus 186 ~l~~~i~~-------l~~~~~~LvG~s~GG~ia~~~a~~~P~-----~v~~lILi~~~~~ 233 (383)
T PLN03084 186 SLESLIDE-------LKSDKVSLVVQGYFSPPVVKYASAHPD-----KIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHHH-------hCCCCceEEEECHHHHHHHHHHHhChH-----hhcEEEEECCCCc
Confidence 66666654 223579999999999765555544322 3899999998653
No 38
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=97.67 E-value=0.00042 Score=70.11 Aligned_cols=140 Identities=16% Similarity=0.172 Sum_probs=83.3
Q ss_pred CCCCCcceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhh
Q 019704 36 QPQASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKE 115 (337)
Q Consensus 36 ~~~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~ 115 (337)
+.+...+.-.-|++.+ +..+||+...... +...|.||++||.+|.+.+.-..+. | .+. ..+.+.
T Consensus 169 ~~~~~~~~~~~~~~~~---~~~l~~~~~gp~~-~~~k~~VVLlHG~~~s~~~W~~~~~---~------~L~---~~~~~~ 232 (481)
T PLN03087 169 WSDCDCKFCTSWLSSS---NESLFVHVQQPKD-NKAKEDVLFIHGFISSSAFWTETLF---P------NFS---DAAKST 232 (481)
T ss_pred ccccccceeeeeEeeC---CeEEEEEEecCCC-CCCCCeEEEECCCCccHHHHHHHHH---H------HHH---HHhhCC
Confidence 3344455556777664 3578887654432 2234789999999988765211000 0 000 023456
Q ss_pred ccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcccc
Q 019704 116 ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKL 195 (337)
Q Consensus 116 an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~i 195 (337)
..++.+|.| |.|-|-......+ +-++.++++. +.+++.. ...+++|+|+|+||..+-.+|.+-.+.
T Consensus 233 yrVia~Dl~-G~G~S~~p~~~~y---tl~~~a~~l~---~~ll~~l---g~~k~~LVGhSmGG~iAl~~A~~~Pe~---- 298 (481)
T PLN03087 233 YRLFAVDLL-GFGRSPKPADSLY---TLREHLEMIE---RSVLERY---KVKSFHIVAHSLGCILALALAVKHPGA---- 298 (481)
T ss_pred CEEEEECCC-CCCCCcCCCCCcC---CHHHHHHHHH---HHHHHHc---CCCCEEEEEECHHHHHHHHHHHhChHh----
Confidence 789999999 8888842211122 2333334332 2333433 346899999999999888887754432
Q ss_pred ccceEEEeCcc
Q 019704 196 NLKGIAIGNPL 206 (337)
Q Consensus 196 nLkGi~igng~ 206 (337)
++++++.++.
T Consensus 299 -V~~LVLi~~~ 308 (481)
T PLN03087 299 -VKSLTLLAPP 308 (481)
T ss_pred -ccEEEEECCC
Confidence 7888888754
No 39
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=97.67 E-value=0.00019 Score=71.27 Aligned_cols=79 Identities=22% Similarity=0.228 Sum_probs=55.1
Q ss_pred ccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcccc
Q 019704 116 ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKL 195 (337)
Q Consensus 116 an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~i 195 (337)
.++|-+|.| |.|.|-... . ..+. ..+...+..|+...|.....++.|+|+|+||.+++.+|..-.+
T Consensus 223 y~vl~~D~p-G~G~s~~~~---~--~~d~---~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~~Al~~A~~~p~----- 288 (414)
T PRK05077 223 IAMLTIDMP-SVGFSSKWK---L--TQDS---SLLHQAVLNALPNVPWVDHTRVAAFGFRFGANVAVRLAYLEPP----- 288 (414)
T ss_pred CEEEEECCC-CCCCCCCCC---c--cccH---HHHHHHHHHHHHhCcccCcccEEEEEEChHHHHHHHHHHhCCc-----
Confidence 789999999 999984321 1 1121 1222344556666776667789999999999999988854322
Q ss_pred ccceEEEeCcccC
Q 019704 196 NLKGIAIGNPLLE 208 (337)
Q Consensus 196 nLkGi~igng~~d 208 (337)
.++++++.+|.++
T Consensus 289 ri~a~V~~~~~~~ 301 (414)
T PRK05077 289 RLKAVACLGPVVH 301 (414)
T ss_pred CceEEEEECCccc
Confidence 3889998888765
No 40
>PLN02965 Probable pheophorbidase
Probab=97.66 E-value=0.00013 Score=66.95 Aligned_cols=100 Identities=12% Similarity=0.135 Sum_probs=64.1
Q ss_pred EEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccc-hhhccccccccCccccccccccCCCCccCChHHHHHHHHHH
Q 019704 75 VLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAF 153 (337)
Q Consensus 75 ~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW-~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~f 153 (337)
||.+||.++.+...-.+. ... .+...++-+|.| |.|.|-...... .+-+..|+|+.++
T Consensus 6 vvllHG~~~~~~~w~~~~-----------------~~L~~~~~~via~Dl~-G~G~S~~~~~~~---~~~~~~a~dl~~~ 64 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLA-----------------TLLDAAGFKSTCVDLT-GAGISLTDSNTV---SSSDQYNRPLFAL 64 (255)
T ss_pred EEEECCCCCCcCcHHHHH-----------------HHHhhCCceEEEecCC-cCCCCCCCcccc---CCHHHHHHHHHHH
Confidence 888999876554421111 122 234689999999 999884322111 2345556666666
Q ss_pred HHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 154 LEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 154 l~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+.. .+ ..++++|+|+|+||..+..+|.+.-+. ++++++.|+.
T Consensus 65 l~~----l~--~~~~~~lvGhSmGG~ia~~~a~~~p~~-----v~~lvl~~~~ 106 (255)
T PLN02965 65 LSD----LP--PDHKVILVGHSIGGGSVTEALCKFTDK-----ISMAIYVAAA 106 (255)
T ss_pred HHh----cC--CCCCEEEEecCcchHHHHHHHHhCchh-----eeEEEEEccc
Confidence 653 21 125899999999999888888754332 7888888765
No 41
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=97.61 E-value=0.00031 Score=67.59 Aligned_cols=103 Identities=19% Similarity=0.132 Sum_probs=66.1
Q ss_pred CCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHH
Q 019704 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARD 149 (337)
Q Consensus 70 ~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~ 149 (337)
.+.|.+|++||.+|.+.. ...+.+ ...+..+++-+|.| |.|.|-.... ..+-+..+++
T Consensus 129 ~~~~~vl~~HG~~~~~~~-~~~~~~----------------~l~~~~~v~~~d~~-g~G~s~~~~~----~~~~~~~~~~ 186 (371)
T PRK14875 129 GDGTPVVLIHGFGGDLNN-WLFNHA----------------ALAAGRPVIALDLP-GHGASSKAVG----AGSLDELAAA 186 (371)
T ss_pred CCCCeEEEECCCCCccch-HHHHHH----------------HHhcCCEEEEEcCC-CCCCCCCCCC----CCCHHHHHHH
Confidence 456889999998887765 222211 12223689999998 9998832211 1233444555
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 150 ~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+..+++ . +...+++|+|+|+||..+..+|..-. -.++++++.++.
T Consensus 187 ~~~~~~----~---~~~~~~~lvG~S~Gg~~a~~~a~~~~-----~~v~~lv~~~~~ 231 (371)
T PRK14875 187 VLAFLD----A---LGIERAHLVGHSMGGAVALRLAARAP-----QRVASLTLIAPA 231 (371)
T ss_pred HHHHHH----h---cCCccEEEEeechHHHHHHHHHHhCc-----hheeEEEEECcC
Confidence 554443 3 33457999999999999888886532 237888877664
No 42
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=97.58 E-value=0.00032 Score=65.58 Aligned_cols=106 Identities=15% Similarity=0.138 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccch-hhccccccccCccccccccccCCCCccCChHHHHH
Q 019704 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (337)
Q Consensus 70 ~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~ 148 (337)
.++|.||+++|..+.++.. ..+ . .... +-.+++-+|.| |.|-|...... ..+-+..++
T Consensus 16 ~~~p~vvliHG~~~~~~~w-~~~-------------~---~~L~~~g~~vi~~dl~-g~G~s~~~~~~---~~~~~~~~~ 74 (273)
T PLN02211 16 RQPPHFVLIHGISGGSWCW-YKI-------------R---CLMENSGYKVTCIDLK-SAGIDQSDADS---VTTFDEYNK 74 (273)
T ss_pred CCCCeEEEECCCCCCcCcH-HHH-------------H---HHHHhCCCEEEEeccc-CCCCCCCCccc---CCCHHHHHH
Confidence 5679999999977665542 111 0 0011 23689999999 88877432211 123444445
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
++.++++ ... ..++++|+|+||||..+-.++.+.-+ .++++++.++..
T Consensus 75 ~l~~~i~----~l~--~~~~v~lvGhS~GG~v~~~~a~~~p~-----~v~~lv~~~~~~ 122 (273)
T PLN02211 75 PLIDFLS----SLP--ENEKVILVGHSAGGLSVTQAIHRFPK-----KICLAVYVAATM 122 (273)
T ss_pred HHHHHHH----hcC--CCCCEEEEEECchHHHHHHHHHhChh-----heeEEEEecccc
Confidence 5555544 332 14689999999999988877765433 277888876643
No 43
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=97.53 E-value=0.0002 Score=63.16 Aligned_cols=96 Identities=14% Similarity=0.035 Sum_probs=60.0
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHH
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~ 151 (337)
.|.||+++|.++.+... -.+. . ...+..+++.+|.| |.|.|-... . .+-++.++++.
T Consensus 4 ~~~iv~~HG~~~~~~~~-~~~~--------------~--~l~~~~~vi~~d~~-G~G~s~~~~--~---~~~~~~~~~~~ 60 (245)
T TIGR01738 4 NVHLVLIHGWGMNAEVF-RCLD--------------E--ELSAHFTLHLVDLP-GHGRSRGFG--P---LSLADAAEAIA 60 (245)
T ss_pred CceEEEEcCCCCchhhH-HHHH--------------H--hhccCeEEEEecCC-cCccCCCCC--C---cCHHHHHHHHH
Confidence 47899999986665542 1110 1 11234789999999 888874321 1 12233333332
Q ss_pred HHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 152 ~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+. . ..+++++|+|+||..+..+|.+-.+. ++++++.++.
T Consensus 61 ~~-------~----~~~~~lvG~S~Gg~~a~~~a~~~p~~-----v~~~il~~~~ 99 (245)
T TIGR01738 61 AQ-------A----PDPAIWLGWSLGGLVALHIAATHPDR-----VRALVTVASS 99 (245)
T ss_pred Hh-------C----CCCeEEEEEcHHHHHHHHHHHHCHHh-----hheeeEecCC
Confidence 21 1 25899999999999888877654332 7888887764
No 44
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=97.49 E-value=0.0005 Score=61.60 Aligned_cols=113 Identities=15% Similarity=0.161 Sum_probs=60.3
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchh-----hccccccccCccccccccccCCCCccC--
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-----EANMLYLESPAGVGFSYSANKSFYGSV-- 141 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~-----~an~l~iDqP~g~GfSy~~~~~~~~~~-- 141 (337)
.+..|+|++|||+++.++. .. ..+.|.+ -..||..|.| |.|.+... -+.+...
T Consensus 10 ~~~~P~vv~lHG~~~~~~~-~~-----------------~~~~~~~~a~~~g~~Vv~Pd~~-g~~~~~~~-~~~~~~~~~ 69 (212)
T TIGR01840 10 TGPRALVLALHGCGQTASA-YV-----------------IDWGWKAAADRYGFVLVAPEQT-SYNSSNNC-WDWFFTHHR 69 (212)
T ss_pred CCCCCEEEEeCCCCCCHHH-Hh-----------------hhcChHHHHHhCCeEEEecCCc-CccccCCC-CCCCCcccc
Confidence 3567999999999986654 21 0011332 2467788877 44422110 0000000
Q ss_pred -ChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 142 -NDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 142 -~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
.......++.++++...+++ .....+++|+|+|.||..+-.+|..-.+ .++++++..|..
T Consensus 70 ~~~~~~~~~~~~~i~~~~~~~-~id~~~i~l~G~S~Gg~~a~~~a~~~p~-----~~~~~~~~~g~~ 130 (212)
T TIGR01840 70 ARGTGEVESLHQLIDAVKANY-SIDPNRVYVTGLSAGGGMTAVLGCTYPD-----VFAGGASNAGLP 130 (212)
T ss_pred CCCCccHHHHHHHHHHHHHhc-CcChhheEEEEECHHHHHHHHHHHhCch-----hheEEEeecCCc
Confidence 00111233444444444444 2344689999999999876665543221 267777776653
No 45
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=97.44 E-value=0.00094 Score=62.51 Aligned_cols=131 Identities=10% Similarity=0.065 Sum_probs=77.2
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccch-hhccccccccCccccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSA 133 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l~iDqP~g~GfSy~~ 133 (337)
..++|.|+.+.... ..+|+||++||-.+-..-..-.+ ..--..+. +-.+++-+|.| |.|.|-..
T Consensus 9 ~g~~~~~~~~p~~~-~~~~~VlllHG~g~~~~~~~~~~-------------~~la~~La~~Gy~Vl~~Dl~-G~G~S~g~ 73 (266)
T TIGR03101 9 HGFRFCLYHPPVAV-GPRGVVIYLPPFAEEMNKSRRMV-------------ALQARAFAAGGFGVLQIDLY-GCGDSAGD 73 (266)
T ss_pred CCcEEEEEecCCCC-CCceEEEEECCCcccccchhHHH-------------HHHHHHHHHCCCEEEEECCC-CCCCCCCc
Confidence 45678777765432 33699999998533110000000 00001233 24689999999 99988542
Q ss_pred cCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCccccc
Q 019704 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDF 213 (337)
Q Consensus 134 ~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~~~ 213 (337)
.. . .+....++|+..+++ |++... ..+++|+|+|.||..+..+|.+.. -.++++++.+|.++-....
T Consensus 74 ~~-~---~~~~~~~~Dv~~ai~-~L~~~~---~~~v~LvG~SmGG~vAl~~A~~~p-----~~v~~lVL~~P~~~g~~~l 140 (266)
T TIGR03101 74 FA-A---ARWDVWKEDVAAAYR-WLIEQG---HPPVTLWGLRLGALLALDAANPLA-----AKCNRLVLWQPVVSGKQQL 140 (266)
T ss_pred cc-c---CCHHHHHHHHHHHHH-HHHhcC---CCCEEEEEECHHHHHHHHHHHhCc-----cccceEEEeccccchHHHH
Confidence 21 1 123334455554433 444332 468999999999998887775532 2378999999988765433
No 46
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=97.26 E-value=0.0019 Score=74.40 Aligned_cols=107 Identities=18% Similarity=0.146 Sum_probs=69.5
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccC-----CCCccCCh
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANK-----SFYGSVND 143 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~-----~~~~~~~~ 143 (337)
.+..|.||++||.+|.+.....++ ..+.+..+++.+|.| |.|.|..... ... ..+-
T Consensus 1368 ~~~~~~vVllHG~~~s~~~w~~~~-----------------~~L~~~~rVi~~Dl~-G~G~S~~~~~~~~~~~~~-~~si 1428 (1655)
T PLN02980 1368 NAEGSVVLFLHGFLGTGEDWIPIM-----------------KAISGSARCISIDLP-GHGGSKIQNHAKETQTEP-TLSV 1428 (1655)
T ss_pred CCCCCeEEEECCCCCCHHHHHHHH-----------------HHHhCCCEEEEEcCC-CCCCCCCccccccccccc-cCCH
Confidence 445689999999999887631111 122344789999999 9898854221 000 1133
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+..|+++..+++. +...+++|+|+|+||..+-.+|.+.-+. ++++++.++.
T Consensus 1429 ~~~a~~l~~ll~~-------l~~~~v~LvGhSmGG~iAl~~A~~~P~~-----V~~lVlis~~ 1479 (1655)
T PLN02980 1429 ELVADLLYKLIEH-------ITPGKVTLVGYSMGARIALYMALRFSDK-----IEGAVIISGS 1479 (1655)
T ss_pred HHHHHHHHHHHHH-------hCCCCEEEEEECHHHHHHHHHHHhChHh-----hCEEEEECCC
Confidence 4455666555542 2346899999999999888887654432 7888887764
No 47
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=97.23 E-value=0.0017 Score=62.44 Aligned_cols=77 Identities=16% Similarity=0.070 Sum_probs=52.8
Q ss_pred hhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc
Q 019704 114 KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (337)
Q Consensus 114 ~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~ 193 (337)
+...++.+|.| |-|-|. . ..+ +.+..|+++.++|+.. .. ++.+.|+|+|+||..+-.+|.+--+.
T Consensus 98 ~~~~Vi~~Dl~-G~g~s~--~-~~~---~~~~~a~dl~~ll~~l-----~l-~~~~~lvG~SmGG~vA~~~A~~~P~~-- 162 (343)
T PRK08775 98 ARFRLLAFDFI-GADGSL--D-VPI---DTADQADAIALLLDAL-----GI-ARLHAFVGYSYGALVGLQFASRHPAR-- 162 (343)
T ss_pred cccEEEEEeCC-CCCCCC--C-CCC---CHHHHHHHHHHHHHHc-----CC-CcceEEEEECHHHHHHHHHHHHChHh--
Confidence 56789999999 666442 1 122 3445577777777641 12 23467999999999888888766543
Q ss_pred ccccceEEEeCcccC
Q 019704 194 KLNLKGIAIGNPLLE 208 (337)
Q Consensus 194 ~inLkGi~igng~~d 208 (337)
++++++.++...
T Consensus 163 ---V~~LvLi~s~~~ 174 (343)
T PRK08775 163 ---VRTLVVVSGAHR 174 (343)
T ss_pred ---hheEEEECcccc
Confidence 889999987543
No 48
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=97.23 E-value=0.0029 Score=59.09 Aligned_cols=42 Identities=21% Similarity=0.199 Sum_probs=31.3
Q ss_pred CCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 164 YKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 164 ~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
...++++|+|+|+||+-+-.+|.+-.+ .+++++..+|+.++.
T Consensus 135 ~~~~~~~~~G~S~GG~~a~~~a~~~p~-----~~~~~~~~~~~~~~~ 176 (275)
T TIGR02821 135 LDGERQGITGHSMGGHGALVIALKNPD-----RFKSVSAFAPIVAPS 176 (275)
T ss_pred CCCCceEEEEEChhHHHHHHHHHhCcc-----cceEEEEECCccCcc
Confidence 445689999999999877666654322 268999999998764
No 49
>PLN02511 hydrolase
Probab=97.18 E-value=0.0026 Score=62.59 Aligned_cols=135 Identities=16% Similarity=0.177 Sum_probs=78.7
Q ss_pred EEEEecCCCCceEEEEEeec--cCCCCCCCEEEEEcCCCChhhhh-h-hhcccCCCCCCCCCccccccccchhhcccccc
Q 019704 46 GYITIDEKQQRALFYYFVEA--ATEAASKPLVLWLNGGPGCSSIG-A-GAFCEHGPFKPSGDTLLRNEYSWNKEANMLYL 121 (337)
Q Consensus 46 Gyl~v~~~~~~~lfy~f~~s--~~~~~~~Pl~lwlnGGPG~Ss~~-~-g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~i 121 (337)
-++...+ +..+.+.++.. ...+.++|+||.++|..|+|.-. + .+. .....+-.+++-+
T Consensus 74 e~l~~~D--G~~~~ldw~~~~~~~~~~~~p~vvllHG~~g~s~~~y~~~~~----------------~~~~~~g~~vv~~ 135 (388)
T PLN02511 74 ECLRTPD--GGAVALDWVSGDDRALPADAPVLILLPGLTGGSDDSYVRHML----------------LRARSKGWRVVVF 135 (388)
T ss_pred EEEECCC--CCEEEEEecCcccccCCCCCCEEEEECCCCCCCCCHHHHHHH----------------HHHHHCCCEEEEE
Confidence 3455432 34555544332 22456789999999999876421 1 111 1112345689999
Q ss_pred ccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEE
Q 019704 122 ESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIA 201 (337)
Q Consensus 122 DqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ 201 (337)
|.| |.|-|-......+ ....++|+..+++..-.++| ..+++++|+|.||..+-.++.+ ..+...|++.+
T Consensus 136 d~r-G~G~s~~~~~~~~----~~~~~~Dl~~~i~~l~~~~~---~~~~~lvG~SlGg~i~~~yl~~---~~~~~~v~~~v 204 (388)
T PLN02511 136 NSR-GCADSPVTTPQFY----SASFTGDLRQVVDHVAGRYP---SANLYAAGWSLGANILVNYLGE---EGENCPLSGAV 204 (388)
T ss_pred ecC-CCCCCCCCCcCEE----cCCchHHHHHHHHHHHHHCC---CCCEEEEEechhHHHHHHHHHh---cCCCCCceEEE
Confidence 999 8888753322222 11234566666666556666 4689999999999876554433 33334577766
Q ss_pred EeCcccCc
Q 019704 202 IGNPLLEF 209 (337)
Q Consensus 202 igng~~d~ 209 (337)
+.++-+|.
T Consensus 205 ~is~p~~l 212 (388)
T PLN02511 205 SLCNPFDL 212 (388)
T ss_pred EECCCcCH
Confidence 55544443
No 50
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.10 E-value=0.013 Score=55.08 Aligned_cols=125 Identities=18% Similarity=0.216 Sum_probs=72.3
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhcc-----cccccc------
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEAN-----MLYLES------ 123 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an-----~l~iDq------ 123 (337)
+...-||++.-...++..||+|.|||+=|...- . .+-..|++.|. |+|-|+
T Consensus 44 g~~r~y~l~vP~g~~~~apLvv~LHG~~~sgag---~---------------~~~sg~d~lAd~~gFlV~yPdg~~~~wn 105 (312)
T COG3509 44 GLKRSYRLYVPPGLPSGAPLVVVLHGSGGSGAG---Q---------------LHGTGWDALADREGFLVAYPDGYDRAWN 105 (312)
T ss_pred CCccceEEEcCCCCCCCCCEEEEEecCCCChHH---h---------------hcccchhhhhcccCcEEECcCccccccC
Confidence 456677777766677888999999998776543 1 13446666665 455541
Q ss_pred CccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEe
Q 019704 124 PAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (337)
Q Consensus 124 P~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ig 203 (337)
|-+.|-++...+. ..+...+..+.+.+..-..+| ......+||+|-|-||..+-.|+..--+. +.+|++.
T Consensus 106 ~~~~~~~~~p~~~----~~g~ddVgflr~lva~l~~~~-gidp~RVyvtGlS~GG~Ma~~lac~~p~~-----faa~A~V 175 (312)
T COG3509 106 ANGCGNWFGPADR----RRGVDDVGFLRALVAKLVNEY-GIDPARVYVTGLSNGGRMANRLACEYPDI-----FAAIAPV 175 (312)
T ss_pred CCcccccCCcccc----cCCccHHHHHHHHHHHHHHhc-CcCcceEEEEeeCcHHHHHHHHHhcCccc-----ccceeee
Confidence 2233333322110 011112223333333333444 33455799999999998766666543332 6777777
Q ss_pred Cccc
Q 019704 204 NPLL 207 (337)
Q Consensus 204 ng~~ 207 (337)
.|..
T Consensus 176 Ag~~ 179 (312)
T COG3509 176 AGLL 179 (312)
T ss_pred eccc
Confidence 7766
No 51
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=97.09 E-value=0.0037 Score=60.17 Aligned_cols=93 Identities=19% Similarity=0.171 Sum_probs=61.5
Q ss_pred hccccccccCccccccccccC-CCCccCChHHHHHHHHHHHHHHHHHC----------------CCCC-CCceEEEeecc
Q 019704 115 EANMLYLESPAGVGFSYSANK-SFYGSVNDAIAARDNLAFLEGWYEKF----------------PEYK-NREFFITGESY 176 (337)
Q Consensus 115 ~an~l~iDqP~g~GfSy~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~f----------------p~~~-~~~~~i~GeSY 176 (337)
-..|+-+|.| |.|.|-+... ..+ ..+-+..++|+..+++..-+.. .++. +.|++|.|||.
T Consensus 74 G~~V~~~D~r-GHG~S~~~~~~~g~-~~~~~~~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSm 151 (332)
T TIGR01607 74 GYSVYGLDLQ-GHGESDGLQNLRGH-INCFDDLVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSM 151 (332)
T ss_pred CCcEEEeccc-ccCCCccccccccc-hhhHHHHHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccC
Confidence 4789999998 9999865422 111 1234556778888887654310 0222 56899999999
Q ss_pred ccccHHHHHHHHHHhc---cccccceEEEeCcccCc
Q 019704 177 AGHYVPQLAQLIIQSN---MKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 177 gG~yvp~~a~~i~~~n---~~inLkGi~igng~~d~ 209 (337)
||..+-.++...-+.. ++..++|+++.+|.+..
T Consensus 152 Gg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~~~~i 187 (332)
T TIGR01607 152 GGNIALRLLELLGKSNENNDKLNIKGCISLSGMISI 187 (332)
T ss_pred ccHHHHHHHHHhccccccccccccceEEEeccceEE
Confidence 9998877776553321 12469999988887643
No 52
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.06 E-value=0.00083 Score=63.09 Aligned_cols=113 Identities=15% Similarity=0.187 Sum_probs=67.8
Q ss_pred CCCCCEEEEEcCCCChh-hhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHH
Q 019704 69 AASKPLVLWLNGGPGCS-SIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAA 147 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~S-s~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a 147 (337)
..+.|++|+++|-.|.. ....-.+ .+.+.-....|++.||-+.+..-.|... ..+....+
T Consensus 33 ~~~~p~vilIHG~~~~~~~~~~~~l--------------~~~ll~~~~~nVi~vD~~~~~~~~y~~a-----~~~~~~v~ 93 (275)
T cd00707 33 NPSRPTRFIIHGWTSSGEESWISDL--------------RKAYLSRGDYNVIVVDWGRGANPNYPQA-----VNNTRVVG 93 (275)
T ss_pred CCCCCcEEEEcCCCCCCCCcHHHHH--------------HHHHHhcCCCEEEEEECccccccChHHH-----HHhHHHHH
Confidence 34579999999977644 1111000 0111112358999999774311111100 11234456
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+++..+|+...+.. ....++++|+|+|.||+.+-.+|.++-+ +++.|+..+|.
T Consensus 94 ~~la~~l~~L~~~~-g~~~~~i~lIGhSlGa~vAg~~a~~~~~-----~v~~iv~LDPa 146 (275)
T cd00707 94 AELAKFLDFLVDNT-GLSLENVHLIGHSLGAHVAGFAGKRLNG-----KLGRITGLDPA 146 (275)
T ss_pred HHHHHHHHHHHHhc-CCChHHEEEEEecHHHHHHHHHHHHhcC-----ccceeEEecCC
Confidence 66777776655543 2334689999999999999988887643 38888887765
No 53
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=97.06 E-value=0.00075 Score=59.45 Aligned_cols=74 Identities=19% Similarity=0.277 Sum_probs=52.6
Q ss_pred cccccccCcccccccc---ccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc
Q 019704 117 NMLYLESPAGVGFSYS---ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (337)
Q Consensus 117 n~l~iDqP~g~GfSy~---~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~ 193 (337)
+|+-+|+| |.|+|.. .... .-..+++.+.+..+.+..+ .++++++|+||||..+-.+|..-.+
T Consensus 2 ~vi~~d~r-G~g~S~~~~~~~~~-------~~~~~~~~~~~~~~~~~l~---~~~~~~vG~S~Gg~~~~~~a~~~p~--- 67 (230)
T PF00561_consen 2 DVILFDLR-GFGYSSPHWDPDFP-------DYTTDDLAADLEALREALG---IKKINLVGHSMGGMLALEYAAQYPE--- 67 (230)
T ss_dssp EEEEEECT-TSTTSSSCCGSGSC-------THCHHHHHHHHHHHHHHHT---TSSEEEEEETHHHHHHHHHHHHSGG---
T ss_pred EEEEEeCC-CCCCCCCCccCCcc-------cccHHHHHHHHHHHHHHhC---CCCeEEEEECCChHHHHHHHHHCch---
Confidence 57789989 9999973 2222 2233556666666666654 4459999999999888777765444
Q ss_pred ccccceEEEeCcc
Q 019704 194 KLNLKGIAIGNPL 206 (337)
Q Consensus 194 ~inLkGi~igng~ 206 (337)
.++++++.++.
T Consensus 68 --~v~~lvl~~~~ 78 (230)
T PF00561_consen 68 --RVKKLVLISPP 78 (230)
T ss_dssp --GEEEEEEESES
T ss_pred --hhcCcEEEeee
Confidence 48999998885
No 54
>PRK10566 esterase; Provisional
Probab=97.04 E-value=0.0029 Score=57.47 Aligned_cols=109 Identities=10% Similarity=0.076 Sum_probs=61.9
Q ss_pred EEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhh-ccccccccCccccccccccCCC
Q 019704 59 FYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKE-ANMLYLESPAGVGFSYSANKSF 137 (337)
Q Consensus 59 fy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~-an~l~iDqP~g~GfSy~~~~~~ 137 (337)
++-+++....+...|+||++||++|.... ...+ ...+.+. .+++.+|.| |.|-|+......
T Consensus 14 ~~~~~p~~~~~~~~p~vv~~HG~~~~~~~-~~~~----------------~~~l~~~G~~v~~~d~~-g~G~~~~~~~~~ 75 (249)
T PRK10566 14 VLHAFPAGQRDTPLPTVFFYHGFTSSKLV-YSYF----------------AVALAQAGFRVIMPDAP-MHGARFSGDEAR 75 (249)
T ss_pred eEEEcCCCCCCCCCCEEEEeCCCCcccch-HHHH----------------HHHHHhCCCEEEEecCC-cccccCCCcccc
Confidence 34344443333457999999999886643 2111 1123333 678999988 777665321110
Q ss_pred CccC---Ch-HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHH
Q 019704 138 YGSV---ND-AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQL 187 (337)
Q Consensus 138 ~~~~---~~-~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~ 187 (337)
. .. .+ ....+++..++ .++...+....+++.|+|+|+||..+-.++.+
T Consensus 76 ~-~~~~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~i~v~G~S~Gg~~al~~~~~ 127 (249)
T PRK10566 76 R-LNHFWQILLQNMQEFPTLR-AAIREEGWLLDDRLAVGGASMGGMTALGIMAR 127 (249)
T ss_pred c-hhhHHHHHHHHHHHHHHHH-HHHHhcCCcCccceeEEeecccHHHHHHHHHh
Confidence 0 00 01 12234444433 44444544556789999999999988766543
No 55
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=97.03 E-value=0.0037 Score=59.46 Aligned_cols=125 Identities=19% Similarity=0.129 Sum_probs=83.3
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccc-hhhccccccccCccccccc-c
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSY-S 132 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW-~~~an~l~iDqP~g~GfSy-~ 132 (337)
+..++|+-++..+++. .+|+++||.=..+.- +--+ -+-+ .+=..++=+|+| |.|.|. +
T Consensus 19 ~~~~~~~~~~~~~~~~--g~Vvl~HG~~Eh~~r-y~~l----------------a~~l~~~G~~V~~~D~R-GhG~S~r~ 78 (298)
T COG2267 19 GTRLRYRTWAAPEPPK--GVVVLVHGLGEHSGR-YEEL----------------ADDLAARGFDVYALDLR-GHGRSPRG 78 (298)
T ss_pred CceEEEEeecCCCCCC--cEEEEecCchHHHHH-HHHH----------------HHHHHhCCCEEEEecCC-CCCCCCCC
Confidence 5788998877765544 899999998665544 2111 0111 123567889999 999996 3
Q ss_pred ccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 133 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
.. .. ..+-.....|+..|++..-+..| ..|++|+|||.||-.+...+.... -.++|+++-+|++...
T Consensus 79 ~r--g~-~~~f~~~~~dl~~~~~~~~~~~~---~~p~~l~gHSmGg~Ia~~~~~~~~-----~~i~~~vLssP~~~l~ 145 (298)
T COG2267 79 QR--GH-VDSFADYVDDLDAFVETIAEPDP---GLPVFLLGHSMGGLIALLYLARYP-----PRIDGLVLSSPALGLG 145 (298)
T ss_pred Cc--CC-chhHHHHHHHHHHHHHHHhccCC---CCCeEEEEeCcHHHHHHHHHHhCC-----ccccEEEEECccccCC
Confidence 22 11 11223334556666665444443 679999999999987777766554 3599999999999876
No 56
>PRK05855 short chain dehydrogenase; Validated
Probab=97.01 E-value=0.0026 Score=64.92 Aligned_cols=101 Identities=14% Similarity=0.121 Sum_probs=63.7
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCcccccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~ 134 (337)
+..+.|+-.. +.+.|.||.+||.++.+.. ..-+. .-+.+..+++-+|.| |.|.|....
T Consensus 12 g~~l~~~~~g----~~~~~~ivllHG~~~~~~~-w~~~~----------------~~L~~~~~Vi~~D~~-G~G~S~~~~ 69 (582)
T PRK05855 12 GVRLAVYEWG----DPDRPTVVLVHGYPDNHEV-WDGVA----------------PLLADRFRVVAYDVR-GAGRSSAPK 69 (582)
T ss_pred CEEEEEEEcC----CCCCCeEEEEcCCCchHHH-HHHHH----------------HHhhcceEEEEecCC-CCCCCCCCC
Confidence 4567766332 2347999999999877655 22110 012345789999999 999996432
Q ss_pred CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHH
Q 019704 135 KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLA 185 (337)
Q Consensus 135 ~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a 185 (337)
... ..+.+..++|+..+++.. - ..++++|+|+|+||..+-.++
T Consensus 70 ~~~--~~~~~~~a~dl~~~i~~l---~---~~~~~~lvGhS~Gg~~a~~~a 112 (582)
T PRK05855 70 RTA--AYTLARLADDFAAVIDAV---S---PDRPVHLLAHDWGSIQGWEAV 112 (582)
T ss_pred ccc--ccCHHHHHHHHHHHHHHh---C---CCCcEEEEecChHHHHHHHHH
Confidence 111 124556677888777742 1 134699999999995543333
No 57
>KOG1455 consensus Lysophospholipase [Lipid transport and metabolism]
Probab=96.96 E-value=0.0052 Score=57.92 Aligned_cols=129 Identities=19% Similarity=0.163 Sum_probs=81.2
Q ss_pred CCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccc
Q 019704 54 QQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSA 133 (337)
Q Consensus 54 ~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~ 133 (337)
.+..||.-+......++-+-+|+.++|.=+-+|..+--+ -. .+..+ -.-+.-+|++ |.|.|-+.
T Consensus 36 rG~~lft~~W~p~~~~~pr~lv~~~HG~g~~~s~~~~~~---a~------~l~~~------g~~v~a~D~~-GhG~SdGl 99 (313)
T KOG1455|consen 36 RGAKLFTQSWLPLSGTEPRGLVFLCHGYGEHSSWRYQST---AK------RLAKS------GFAVYAIDYE-GHGRSDGL 99 (313)
T ss_pred CCCEeEEEecccCCCCCCceEEEEEcCCcccchhhHHHH---HH------HHHhC------CCeEEEeecc-CCCcCCCC
Confidence 356888644443334466789999999666554311100 00 01111 1235679999 99999643
Q ss_pred cCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 134 ~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
..| ..+-+..++|...|+..+-. .+++++.|.|++|||.||-.+-.++.+ + .--..|+++..|..
T Consensus 100 --~~y-i~~~d~~v~D~~~~~~~i~~-~~e~~~lp~FL~GeSMGGAV~Ll~~~k--~---p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 100 --HAY-VPSFDLVVDDVISFFDSIKE-REENKGLPRFLFGESMGGAVALLIALK--D---PNFWDGAILVAPMC 164 (313)
T ss_pred --ccc-CCcHHHHHHHHHHHHHHHhh-ccccCCCCeeeeecCcchHHHHHHHhh--C---Ccccccceeeeccc
Confidence 344 34556677888877776544 458889999999999999766655544 1 12367777777764
No 58
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=96.91 E-value=0.0042 Score=54.01 Aligned_cols=104 Identities=21% Similarity=0.217 Sum_probs=63.4
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHH
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~ 151 (337)
.|.+++++|+|+++.... ...+. +...... .+++.+|+| |.|.|. .. .+ .....++++.
T Consensus 21 ~~~i~~~hg~~~~~~~~~-~~~~~---------~~~~~~~----~~~~~~d~~-g~g~s~-~~--~~---~~~~~~~~~~ 79 (282)
T COG0596 21 GPPLVLLHGFPGSSSVWR-PVFKV---------LPALAAR----YRVIAPDLR-GHGRSD-PA--GY---SLSAYADDLA 79 (282)
T ss_pred CCeEEEeCCCCCchhhhH-HHHHH---------hhccccc----eEEEEeccc-CCCCCC-cc--cc---cHHHHHHHHH
Confidence 679999999999887632 10000 0001111 899999999 999996 11 11 1111134444
Q ss_pred HHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccC
Q 019704 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (337)
Q Consensus 152 ~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d 208 (337)
.+ ++.. ...++.++|+|+||..+-.++.+..+ .++++++.++...
T Consensus 80 ~~----~~~~---~~~~~~l~G~S~Gg~~~~~~~~~~p~-----~~~~~v~~~~~~~ 124 (282)
T COG0596 80 AL----LDAL---GLEKVVLVGHSMGGAVALALALRHPD-----RVRGLVLIGPAPP 124 (282)
T ss_pred HH----HHHh---CCCceEEEEecccHHHHHHHHHhcch-----hhheeeEecCCCC
Confidence 34 4433 23349999999998777666665554 3778877776544
No 59
>PRK10985 putative hydrolase; Provisional
Probab=96.90 E-value=0.0088 Score=57.16 Aligned_cols=128 Identities=17% Similarity=0.150 Sum_probs=65.4
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhh--hhcccCCCCCCCCCccccccccchhhccccccccCcccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGA--GAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYS 132 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~--g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~ 132 (337)
+..+.+++.+....+..+|++|.++|.+|.+.... .+. + .+ . .+-.+++-+|.+ |.|=|-.
T Consensus 41 g~~~~l~w~~~~~~~~~~p~vll~HG~~g~~~~~~~~~~~-~---------~l--~----~~G~~v~~~d~r-G~g~~~~ 103 (324)
T PRK10985 41 GDFVDLAWSEDPAQARHKPRLVLFHGLEGSFNSPYAHGLL-E---------AA--Q----KRGWLGVVMHFR-GCSGEPN 103 (324)
T ss_pred CCEEEEecCCCCccCCCCCEEEEeCCCCCCCcCHHHHHHH-H---------HH--H----HCCCEEEEEeCC-CCCCCcc
Confidence 34454444433334456899999999998753211 111 0 00 1 112356777877 6553321
Q ss_pred ccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 133 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
.....+. ... .+|+..+++.-.+.+| ..+++++|+|+||..+-.++.+ ...+..++++++.++-.+.
T Consensus 104 ~~~~~~~-~~~---~~D~~~~i~~l~~~~~---~~~~~~vG~S~GG~i~~~~~~~---~~~~~~~~~~v~i~~p~~~ 170 (324)
T PRK10985 104 RLHRIYH-SGE---TEDARFFLRWLQREFG---HVPTAAVGYSLGGNMLACLLAK---EGDDLPLDAAVIVSAPLML 170 (324)
T ss_pred CCcceEC-CCc---hHHHHHHHHHHHHhCC---CCCEEEEEecchHHHHHHHHHh---hCCCCCccEEEEEcCCCCH
Confidence 1111121 112 2344444433233444 4689999999999765444433 2222347776666665553
No 60
>KOG4178 consensus Soluble epoxide hydrolase [Lipid transport and metabolism]
Probab=96.80 E-value=0.017 Score=55.09 Aligned_cols=124 Identities=19% Similarity=0.218 Sum_probs=82.1
Q ss_pred cceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhh-cccc
Q 019704 41 FQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKE-ANML 119 (337)
Q Consensus 41 ~~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~-an~l 119 (337)
.....+|++++. +++++.|. .++..|++|.|+|=|=.+=..- - ---..... ..++
T Consensus 20 ~~~~hk~~~~~g-----I~~h~~e~--g~~~gP~illlHGfPe~wyswr----------~-------q~~~la~~~~rvi 75 (322)
T KOG4178|consen 20 SAISHKFVTYKG-----IRLHYVEG--GPGDGPIVLLLHGFPESWYSWR----------H-------QIPGLASRGYRVI 75 (322)
T ss_pred hhcceeeEEEcc-----EEEEEEee--cCCCCCEEEEEccCCccchhhh----------h-------hhhhhhhcceEEE
Confidence 345677888752 77888777 7889999999999885442210 0 00011122 6789
Q ss_pred ccccCccccccccccC-CCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccc
Q 019704 120 YLESPAGVGFSYSANK-SFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLK 198 (337)
Q Consensus 120 ~iDqP~g~GfSy~~~~-~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLk 198 (337)
.+|.+ |-|+|-.... ..| +-...+.|+..+|.. +...+++++||+||+..+=.+|..--+. ++
T Consensus 76 A~Dlr-GyG~Sd~P~~~~~Y---t~~~l~~di~~lld~-------Lg~~k~~lvgHDwGaivaw~la~~~Per-----v~ 139 (322)
T KOG4178|consen 76 APDLR-GYGFSDAPPHISEY---TIDELVGDIVALLDH-------LGLKKAFLVGHDWGAIVAWRLALFYPER-----VD 139 (322)
T ss_pred ecCCC-CCCCCCCCCCccee---eHHHHHHHHHHHHHH-------hccceeEEEeccchhHHHHHHHHhChhh-----cc
Confidence 99999 9999965433 333 445566677666653 3356899999999999888888777665 44
Q ss_pred eEEEeC
Q 019704 199 GIAIGN 204 (337)
Q Consensus 199 Gi~ign 204 (337)
|++..|
T Consensus 140 ~lv~~n 145 (322)
T KOG4178|consen 140 GLVTLN 145 (322)
T ss_pred eEEEec
Confidence 555444
No 61
>KOG1515 consensus Arylacetamide deacetylase [Defense mechanisms]
Probab=96.78 E-value=0.014 Score=56.48 Aligned_cols=145 Identities=16% Similarity=0.204 Sum_probs=87.1
Q ss_pred eEEEEEEecCCCCceEEEEEeeccC-CC-CCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccch-hhcccc
Q 019704 43 QYAGYITIDEKQQRALFYYFVEAAT-EA-ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANML 119 (337)
Q Consensus 43 ~~sGyl~v~~~~~~~lfy~f~~s~~-~~-~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l 119 (337)
..+.-++++ ....++-+.+.... .+ .++|++||+|||=-|-+.. .. ....+--++. +.++.+
T Consensus 61 v~~~dv~~~--~~~~l~vRly~P~~~~~~~~~p~lvyfHGGGf~~~S~--~~-----------~~y~~~~~~~a~~~~~v 125 (336)
T KOG1515|consen 61 VTSKDVTID--PFTNLPVRLYRPTSSSSETKLPVLVYFHGGGFCLGSA--NS-----------PAYDSFCTRLAAELNCV 125 (336)
T ss_pred ceeeeeEec--CCCCeEEEEEcCCCCCcccCceEEEEEeCCccEeCCC--CC-----------chhHHHHHHHHHHcCeE
Confidence 334444443 34678877666544 34 6899999999997665430 00 0111112232 445544
Q ss_pred ccccCccccccccccCCCCccCChHHHHHHHHHHHHH-HHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhc-ccccc
Q 019704 120 YLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEG-WYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSN-MKLNL 197 (337)
Q Consensus 120 ~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~-f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n-~~inL 197 (337)
-| .++|=-... ..+. ..-++.-+.+.-++++ |.+..=+.+ +++|+|.|-||..+-.+|.++.+.. .++.|
T Consensus 126 vv----SVdYRLAPE-h~~P-a~y~D~~~Al~w~~~~~~~~~~~D~~--rv~l~GDSaGGNia~~va~r~~~~~~~~~ki 197 (336)
T KOG1515|consen 126 VV----SVDYRLAPE-HPFP-AAYDDGWAALKWVLKNSWLKLGADPS--RVFLAGDSAGGNIAHVVAQRAADEKLSKPKI 197 (336)
T ss_pred EE----ecCcccCCC-CCCC-ccchHHHHHHHHHHHhHHHHhCCCcc--cEEEEccCccHHHHHHHHHHHhhccCCCcce
Confidence 43 344444322 2221 1212222334444444 777665554 3999999999999999999999863 56899
Q ss_pred ceEEEeCcccCcc
Q 019704 198 KGIAIGNPLLEFN 210 (337)
Q Consensus 198 kGi~igng~~d~~ 210 (337)
+|+++.-|++...
T Consensus 198 ~g~ili~P~~~~~ 210 (336)
T KOG1515|consen 198 KGQILIYPFFQGT 210 (336)
T ss_pred EEEEEEecccCCC
Confidence 9999999987654
No 62
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=96.76 E-value=0.0067 Score=56.64 Aligned_cols=79 Identities=22% Similarity=0.217 Sum_probs=54.2
Q ss_pred ccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcccc
Q 019704 116 ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKL 195 (337)
Q Consensus 116 an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~i 195 (337)
.+++-+|.| |.|-|-... .+-....+|+..+++.+-+..|.+ .++.++|+|.||..+-.+|.. . -
T Consensus 58 ~~v~~~Dl~-G~G~S~~~~------~~~~~~~~d~~~~~~~l~~~~~g~--~~i~l~G~S~Gg~~a~~~a~~---~---~ 122 (274)
T TIGR03100 58 FPVLRFDYR-GMGDSEGEN------LGFEGIDADIAAAIDAFREAAPHL--RRIVAWGLCDAASAALLYAPA---D---L 122 (274)
T ss_pred CEEEEeCCC-CCCCCCCCC------CCHHHHHHHHHHHHHHHHhhCCCC--CcEEEEEECHHHHHHHHHhhh---C---C
Confidence 789999999 999875321 122334566777777655555544 469999999999765555421 1 2
Q ss_pred ccceEEEeCcccCc
Q 019704 196 NLKGIAIGNPLLEF 209 (337)
Q Consensus 196 nLkGi~igng~~d~ 209 (337)
.++|+++.||++..
T Consensus 123 ~v~~lil~~p~~~~ 136 (274)
T TIGR03100 123 RVAGLVLLNPWVRT 136 (274)
T ss_pred CccEEEEECCccCC
Confidence 49999999999753
No 63
>PLN02442 S-formylglutathione hydrolase
Probab=96.75 E-value=0.0073 Score=56.78 Aligned_cols=55 Identities=15% Similarity=0.146 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+++...+..++.. ....+++|+|+|+||+-+-.+|.+-.+ .+++++..+|..|+.
T Consensus 127 ~~l~~~i~~~~~~---~~~~~~~i~G~S~GG~~a~~~a~~~p~-----~~~~~~~~~~~~~~~ 181 (283)
T PLN02442 127 KELPKLLSDNFDQ---LDTSRASIFGHSMGGHGALTIYLKNPD-----KYKSVSAFAPIANPI 181 (283)
T ss_pred HHHHHHHHHHHHh---cCCCceEEEEEChhHHHHHHHHHhCch-----hEEEEEEECCccCcc
Confidence 4455555555543 345679999999999766555543222 278899999998865
No 64
>PRK07581 hypothetical protein; Validated
Probab=96.75 E-value=0.0069 Score=57.98 Aligned_cols=130 Identities=15% Similarity=0.044 Sum_probs=70.8
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCcccccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSAN 134 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~ 134 (337)
+..++|.-... ..+...|+||.++|++|.+.+. ......||- + . .+...+|-+|.| |.|.|-...
T Consensus 25 ~~~l~y~~~G~-~~~~~~~~vll~~~~~~~~~~~-~~~~~~~~~------l-----~-~~~~~vi~~D~~-G~G~S~~~~ 89 (339)
T PRK07581 25 DARLAYKTYGT-LNAAKDNAILYPTWYSGTHQDN-EWLIGPGRA------L-----D-PEKYFIIIPNMF-GNGLSSSPS 89 (339)
T ss_pred CceEEEEecCc-cCCCCCCEEEEeCCCCCCcccc-hhhccCCCc------c-----C-cCceEEEEecCC-CCCCCCCCC
Confidence 34566543221 1345668888876665544331 111111111 0 0 245789999999 999985322
Q ss_pred CC--CCccCC--hHHHHHHHHHHHHHHHHHCCCCCCCc-eEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 135 KS--FYGSVN--DAIAARDNLAFLEGWYEKFPEYKNRE-FFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 135 ~~--~~~~~~--~~~~a~~~~~fl~~f~~~fp~~~~~~-~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
.. .++... ....++++........+. +.-.+ .+|+|+|+||..+-.+|.+--+. ++++++.++..
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~---lgi~~~~~lvG~S~GG~va~~~a~~~P~~-----V~~Lvli~~~~ 159 (339)
T PRK07581 90 NTPAPFNAARFPHVTIYDNVRAQHRLLTEK---FGIERLALVVGWSMGAQQTYHWAVRYPDM-----VERAAPIAGTA 159 (339)
T ss_pred CCCCCCCCCCCCceeHHHHHHHHHHHHHHH---hCCCceEEEEEeCHHHHHHHHHHHHCHHH-----HhhheeeecCC
Confidence 11 121100 112334443322222222 23346 57999999999999998877665 77888776553
No 65
>KOG2564 consensus Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=96.64 E-value=0.0039 Score=58.15 Aligned_cols=107 Identities=22% Similarity=0.343 Sum_probs=69.1
Q ss_pred CCCCEEEEEcCCCChhhhhhhhcc-cCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHH
Q 019704 70 ASKPLVLWLNGGPGCSSIGAGAFC-EHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (337)
Q Consensus 70 ~~~Pl~lwlnGGPG~Ss~~~g~~~-e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~ 148 (337)
..-|+++.+||| |.|.|..+.|. | + +.-.= .-+|-+|-. |.|=+-..+..+. +-+..++
T Consensus 72 t~gpil~l~HG~-G~S~LSfA~~a~e----------l--~s~~~---~r~~a~DlR-gHGeTk~~~e~dl---S~eT~~K 131 (343)
T KOG2564|consen 72 TEGPILLLLHGG-GSSALSFAIFASE----------L--KSKIR---CRCLALDLR-GHGETKVENEDDL---SLETMSK 131 (343)
T ss_pred CCccEEEEeecC-cccchhHHHHHHH----------H--Hhhcc---eeEEEeecc-ccCccccCChhhc---CHHHHHH
Confidence 345999999987 77776444441 1 1 11111 113778977 9998866555443 4566789
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeC
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGN 204 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ign 204 (337)
|+...++.+|..-| .++.|+|||.||-.+.+.|..= .--+|.|+.+.+
T Consensus 132 D~~~~i~~~fge~~----~~iilVGHSmGGaIav~~a~~k----~lpsl~Gl~viD 179 (343)
T KOG2564|consen 132 DFGAVIKELFGELP----PQIILVGHSMGGAIAVHTAASK----TLPSLAGLVVID 179 (343)
T ss_pred HHHHHHHHHhccCC----CceEEEeccccchhhhhhhhhh----hchhhhceEEEE
Confidence 99988888775433 3699999999998775544321 114588888765
No 66
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=96.57 E-value=0.02 Score=56.09 Aligned_cols=137 Identities=13% Similarity=0.029 Sum_probs=72.9
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhc--ccCCCCCCCCCccccccccc-hhhccccccccCccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAF--CEHGPFKPSGDTLLRNEYSW-NKEANMLYLESPAGVGFSY 131 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~--~e~GP~~~~~~~~~~n~~sW-~~~an~l~iDqP~g~GfSy 131 (337)
+..++|.-.-. .+++..|.||.+||-+|.+.. .... .+.+|=..+ .+..-.... .+...||-+|.|-+.|.|.
T Consensus 32 ~~~~~y~~~G~-~~~~~~p~vvl~HG~~~~~~~-~~~~~~~~~~~~~w~--~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~ 107 (379)
T PRK00175 32 PVELAYETYGT-LNADRSNAVLICHALTGDHHV-AGPHSPDDPKPGWWD--NMVGPGKPIDTDRYFVICSNVLGGCKGST 107 (379)
T ss_pred CceEEEEeccc-cCCCCCCEEEEeCCcCCchhh-cccccccCCCCcchh--hccCCCCccCccceEEEeccCCCCCCCCC
Confidence 45677763321 123457999999999997764 2110 000000000 000000000 2356899999994345553
Q ss_pred cccC------CCC----ccCChHHHHHHHHHHHHHHHHHCCCCCCCc-eEEEeeccccccHHHHHHHHHHhccccccceE
Q 019704 132 SANK------SFY----GSVNDAIAARDNLAFLEGWYEKFPEYKNRE-FFITGESYAGHYVPQLAQLIIQSNMKLNLKGI 200 (337)
Q Consensus 132 ~~~~------~~~----~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~-~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi 200 (337)
.... ..+ ...+-+..++++..+++ .. .-.+ ++|+|+|+||..+-.+|.+--+. ++++
T Consensus 108 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~----~l---~~~~~~~lvG~S~Gg~ia~~~a~~~p~~-----v~~l 175 (379)
T PRK00175 108 GPSSINPDTGKPYGSDFPVITIRDWVRAQARLLD----AL---GITRLAAVVGGSMGGMQALEWAIDYPDR-----VRSA 175 (379)
T ss_pred CCCCCCCCCCCcccCCCCcCCHHHHHHHHHHHHH----Hh---CCCCceEEEEECHHHHHHHHHHHhChHh-----hhEE
Confidence 2110 000 01123334445544444 33 2345 58999999999888888775543 8999
Q ss_pred EEeCccc
Q 019704 201 AIGNPLL 207 (337)
Q Consensus 201 ~igng~~ 207 (337)
++.|+..
T Consensus 176 vl~~~~~ 182 (379)
T PRK00175 176 LVIASSA 182 (379)
T ss_pred EEECCCc
Confidence 9988654
No 67
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=96.51 E-value=0.0096 Score=59.59 Aligned_cols=80 Identities=18% Similarity=0.238 Sum_probs=53.1
Q ss_pred hccccccccCcccccc-ccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc
Q 019704 115 EANMLYLESPAGVGFS-YSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (337)
Q Consensus 115 ~an~l~iDqP~g~GfS-y~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~ 193 (337)
..|++-+|-| |-|-| |... ..+...+|+++.++|+...+.. .+.-.+++|+|+|.|||.+-.+|.+.-
T Consensus 73 d~nVI~VDw~-g~g~s~y~~a-----~~~t~~vg~~la~lI~~L~~~~-gl~l~~VhLIGHSLGAhIAg~ag~~~p---- 141 (442)
T TIGR03230 73 SANVIVVDWL-SRAQQHYPTS-----AAYTKLVGKDVAKFVNWMQEEF-NYPWDNVHLLGYSLGAHVAGIAGSLTK---- 141 (442)
T ss_pred CCEEEEEECC-CcCCCCCccc-----cccHHHHHHHHHHHHHHHHHhh-CCCCCcEEEEEECHHHHHHHHHHHhCC----
Confidence 4799999998 44433 2111 1234566777777776554433 344568999999999998888876432
Q ss_pred ccccceEEEeCcc
Q 019704 194 KLNLKGIAIGNPL 206 (337)
Q Consensus 194 ~inLkGi~igng~ 206 (337)
-.|..|++.+|.
T Consensus 142 -~rV~rItgLDPA 153 (442)
T TIGR03230 142 -HKVNRITGLDPA 153 (442)
T ss_pred -cceeEEEEEcCC
Confidence 237788887764
No 68
>PRK10162 acetyl esterase; Provisional
Probab=96.43 E-value=0.012 Score=56.23 Aligned_cols=61 Identities=10% Similarity=0.087 Sum_probs=42.6
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc-ccccceEEEeCcccCc
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM-KLNLKGIAIGNPLLEF 209 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~-~inLkGi~igng~~d~ 209 (337)
.+.++++.+..+.+ ....+++.|+|+|.||+-+-.++.++.+... ...++|+++..|++|.
T Consensus 136 ~~a~~~l~~~~~~~-~~d~~~i~l~G~SaGG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~~~ 197 (318)
T PRK10162 136 VAVCCYFHQHAEDY-GINMSRIGFAGDSAGAMLALASALWLRDKQIDCGKVAGVLLWYGLYGL 197 (318)
T ss_pred HHHHHHHHHhHHHh-CCChhHEEEEEECHHHHHHHHHHHHHHhcCCCccChhheEEECCccCC
Confidence 33444454443333 2234579999999999999999887765432 2468899999998885
No 69
>PLN00021 chlorophyllase
Probab=96.30 E-value=0.0085 Score=57.42 Aligned_cols=114 Identities=14% Similarity=0.114 Sum_probs=65.1
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhh-ccccccccCccccccccccCCCCccCChHHHH
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKE-ANMLYLESPAGVGFSYSANKSFYGSVNDAIAA 147 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~-an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a 147 (337)
..+.|+|+++||+.+.......++ . .+.+. ..++.+|.+ | ++-. .. ..+.+.+
T Consensus 49 ~g~~PvVv~lHG~~~~~~~y~~l~--------------~---~Las~G~~VvapD~~-g--~~~~---~~---~~~i~d~ 102 (313)
T PLN00021 49 AGTYPVLLFLHGYLLYNSFYSQLL--------------Q---HIASHGFIVVAPQLY-T--LAGP---DG---TDEIKDA 102 (313)
T ss_pred CCCCCEEEEECCCCCCcccHHHHH--------------H---HHHhCCCEEEEecCC-C--cCCC---Cc---hhhHHHH
Confidence 456799999999876554311111 0 01122 456777766 3 3211 11 1222334
Q ss_pred HHHHHHHHHHHHH-CC---CCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccC
Q 019704 148 RDNLAFLEGWYEK-FP---EYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (337)
Q Consensus 148 ~~~~~fl~~f~~~-fp---~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d 208 (337)
.++..++.+-++. -| +...++++|+|+|.||..+-.+|....+......+++++..+++..
T Consensus 103 ~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~g 167 (313)
T PLN00021 103 AAVINWLSSGLAAVLPEGVRPDLSKLALAGHSRGGKTAFALALGKAAVSLPLKFSALIGLDPVDG 167 (313)
T ss_pred HHHHHHHHhhhhhhcccccccChhheEEEEECcchHHHHHHHhhccccccccceeeEEeeccccc
Confidence 5555555543332 12 2334579999999999988888866543322256889888888654
No 70
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=96.20 E-value=0.0097 Score=58.76 Aligned_cols=82 Identities=21% Similarity=0.188 Sum_probs=54.7
Q ss_pred hhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc
Q 019704 114 KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (337)
Q Consensus 114 ~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~ 193 (337)
+--+||=||-| |+|+|.... . +.| .+.++..+..|+..-|+....++-++|-|+||.|++.+|..=.++
T Consensus 217 rGiA~LtvDmP-G~G~s~~~~---l--~~D---~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGGy~AvRlA~le~~R-- 285 (411)
T PF06500_consen 217 RGIAMLTVDMP-GQGESPKWP---L--TQD---SSRLHQAVLDYLASRPWVDHTRVGAWGFSFGGYYAVRLAALEDPR-- 285 (411)
T ss_dssp CT-EEEEE--T-TSGGGTTT----S---S----CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHHHHTTTT--
T ss_pred CCCEEEEEccC-CCcccccCC---C--CcC---HHHHHHHHHHHHhcCCccChhheEEEEeccchHHHHHHHHhcccc--
Confidence 45579999999 999984221 1 112 134667777888889999888999999999999999998543332
Q ss_pred ccccceEEEeCcccCc
Q 019704 194 KLNLKGIAIGNPLLEF 209 (337)
Q Consensus 194 ~inLkGi~igng~~d~ 209 (337)
|||++.-.|.++.
T Consensus 286 ---lkavV~~Ga~vh~ 298 (411)
T PF06500_consen 286 ---LKAVVALGAPVHH 298 (411)
T ss_dssp ----SEEEEES---SC
T ss_pred ---eeeEeeeCchHhh
Confidence 8998777766543
No 71
>PRK10115 protease 2; Provisional
Probab=96.16 E-value=0.013 Score=62.04 Aligned_cols=141 Identities=13% Similarity=0.049 Sum_probs=74.4
Q ss_pred ecCCCCceEEEEEeeccC--CCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhc-cccccccCcc
Q 019704 50 IDEKQQRALFYYFVEAAT--EAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEA-NMLYLESPAG 126 (337)
Q Consensus 50 v~~~~~~~lfy~f~~s~~--~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~a-n~l~iDqP~g 126 (337)
+....+..+-.|++-... .....|++|+.+||||.+.. -++..+ . -+|.+.- -+++..-.-|
T Consensus 421 ~~s~DG~~Ip~~l~~~~~~~~~~~~P~ll~~hGg~~~~~~-p~f~~~-------------~-~~l~~rG~~v~~~n~RGs 485 (686)
T PRK10115 421 ITARDGVEVPVSLVYHRKHFRKGHNPLLVYGYGSYGASID-ADFSFS-------------R-LSLLDRGFVYAIVHVRGG 485 (686)
T ss_pred EECCCCCEEEEEEEEECCCCCCCCCCEEEEEECCCCCCCC-CCccHH-------------H-HHHHHCCcEEEEEEcCCC
Confidence 333345566655443221 23456999999999998854 222111 1 1344332 2333443444
Q ss_pred ccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 127 VGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 127 ~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+||...-....... +-....+|+..+.+... .-.--...++.|.|-||||.-+-.++.+--+ .++.++...|+
T Consensus 486 ~g~G~~w~~~g~~~-~k~~~~~D~~a~~~~Lv-~~g~~d~~rl~i~G~S~GG~l~~~~~~~~Pd-----lf~A~v~~vp~ 558 (686)
T PRK10115 486 GELGQQWYEDGKFL-KKKNTFNDYLDACDALL-KLGYGSPSLCYGMGGSAGGMLMGVAINQRPE-----LFHGVIAQVPF 558 (686)
T ss_pred CccCHHHHHhhhhh-cCCCcHHHHHHHHHHHH-HcCCCChHHeEEEEECHHHHHHHHHHhcChh-----heeEEEecCCc
Confidence 55543211110000 00122356666555333 3333345689999999999744333322111 28999999999
Q ss_pred cCcccc
Q 019704 207 LEFNTD 212 (337)
Q Consensus 207 ~d~~~~ 212 (337)
+|+...
T Consensus 559 ~D~~~~ 564 (686)
T PRK10115 559 VDVVTT 564 (686)
T ss_pred hhHhhh
Confidence 998754
No 72
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=95.97 E-value=0.0056 Score=54.51 Aligned_cols=94 Identities=15% Similarity=0.121 Sum_probs=61.1
Q ss_pred hhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc
Q 019704 114 KEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM 193 (337)
Q Consensus 114 ~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~ 193 (337)
+=..|+.+|.+.+.||+..-...... .......+|+.++++...++. ....+++.|+|.||||+-+-.++.+- .
T Consensus 13 ~Gy~v~~~~~rGs~g~g~~~~~~~~~-~~~~~~~~D~~~~i~~l~~~~-~iD~~ri~i~G~S~GG~~a~~~~~~~---~- 86 (213)
T PF00326_consen 13 QGYAVLVPNYRGSGGYGKDFHEAGRG-DWGQADVDDVVAAIEYLIKQY-YIDPDRIGIMGHSYGGYLALLAATQH---P- 86 (213)
T ss_dssp TT-EEEEEE-TTSSSSHHHHHHTTTT-GTTHHHHHHHHHHHHHHHHTT-SEEEEEEEEEEETHHHHHHHHHHHHT---C-
T ss_pred CCEEEEEEcCCCCCccchhHHHhhhc-cccccchhhHHHHHHHHhccc-cccceeEEEEcccccccccchhhccc---c-
Confidence 45678999999888877543222211 122345577777777655554 55567899999999999777666521 1
Q ss_pred ccccceEEEeCcccCcccccc
Q 019704 194 KLNLKGIAIGNPLLEFNTDFN 214 (337)
Q Consensus 194 ~inLkGi~igng~~d~~~~~~ 214 (337)
-.++.++.++|.+|+.....
T Consensus 87 -~~f~a~v~~~g~~d~~~~~~ 106 (213)
T PF00326_consen 87 -DRFKAAVAGAGVSDLFSYYG 106 (213)
T ss_dssp -CGSSEEEEESE-SSTTCSBH
T ss_pred -eeeeeeeccceecchhcccc
Confidence 23789999999999876553
No 73
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=95.92 E-value=0.031 Score=57.57 Aligned_cols=129 Identities=16% Similarity=0.114 Sum_probs=75.1
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccch-hhccccccccCccccccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSA 133 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l~iDqP~g~GfSy~~ 133 (337)
+..|+...+... +....|+||.++|-...+....+. . . ....-|. +-..++-+|.+ |.|.|-+.
T Consensus 6 G~~L~~~~~~P~-~~~~~P~Il~~~gyg~~~~~~~~~------~------~-~~~~~l~~~Gy~vv~~D~R-G~g~S~g~ 70 (550)
T TIGR00976 6 GTRLAIDVYRPA-GGGPVPVILSRTPYGKDAGLRWGL------D------K-TEPAWFVAQGYAVVIQDTR-GRGASEGE 70 (550)
T ss_pred CCEEEEEEEecC-CCCCCCEEEEecCCCCchhhcccc------c------c-ccHHHHHhCCcEEEEEecc-ccccCCCc
Confidence 456775544322 234679999998643322110000 0 0 0111232 35789999988 99999653
Q ss_pred cCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 134 ~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
.. .+ . ...++|+..+++ |+.+.|. ...++.++|+||||..+-.+|..- .-.||+++..++..|..
T Consensus 71 ~~-~~---~-~~~~~D~~~~i~-~l~~q~~-~~~~v~~~G~S~GG~~a~~~a~~~-----~~~l~aiv~~~~~~d~~ 135 (550)
T TIGR00976 71 FD-LL---G-SDEAADGYDLVD-WIAKQPW-CDGNVGMLGVSYLAVTQLLAAVLQ-----PPALRAIAPQEGVWDLY 135 (550)
T ss_pred eE-ec---C-cccchHHHHHHH-HHHhCCC-CCCcEEEEEeChHHHHHHHHhccC-----CCceeEEeecCcccchh
Confidence 21 11 1 234566666655 5656553 345899999999997655544321 13589999988887754
No 74
>KOG2100 consensus Dipeptidyl aminopeptidase [Posttranslational modification, protein turnover, chaperones]
Probab=95.84 E-value=0.038 Score=59.08 Aligned_cols=136 Identities=18% Similarity=0.193 Sum_probs=77.8
Q ss_pred ceEEEEEeeccC-CC-CCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchh-hccccccccCcccccccc
Q 019704 56 RALFYYFVEAAT-EA-ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGFSYS 132 (337)
Q Consensus 56 ~~lfy~f~~s~~-~~-~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~-~an~l~iDqP~g~GfSy~ 132 (337)
-.+++++.-..+ ++ ++-||+++..||||+-+. .+.| .+..|++.+.. -+=++.|| +-|+|+.=.
T Consensus 508 ~~~~~~~~lP~~~~~~~kyPllv~~yGGP~sq~v-~~~~-----------~~~~~~~~~s~~g~~v~~vd-~RGs~~~G~ 574 (755)
T KOG2100|consen 508 ITANAILILPPNFDPSKKYPLLVVVYGGPGSQSV-TSKF-----------SVDWNEVVVSSRGFAVLQVD-GRGSGGYGW 574 (755)
T ss_pred EEEEEEEecCCCCCCCCCCCEEEEecCCCCccee-eeeE-----------EecHHHHhhccCCeEEEEEc-CCCcCCcch
Confidence 345555554433 23 355999999999994333 1222 12234443333 34578889 558876522
Q ss_pred cc-CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 133 AN-KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 133 ~~-~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
.- ..-+...++. ..+|....++.+.+.+ ..-..++.|+|-||||. ++..++.+...--+|--+-.+|++|..
T Consensus 575 ~~~~~~~~~lG~~-ev~D~~~~~~~~~~~~-~iD~~ri~i~GwSyGGy----~t~~~l~~~~~~~fkcgvavaPVtd~~ 647 (755)
T KOG2100|consen 575 DFRSALPRNLGDV-EVKDQIEAVKKVLKLP-FIDRSRVAIWGWSYGGY----LTLKLLESDPGDVFKCGVAVAPVTDWL 647 (755)
T ss_pred hHHHHhhhhcCCc-chHHHHHHHHHHHhcc-cccHHHeEEeccChHHH----HHHHHhhhCcCceEEEEEEecceeeee
Confidence 10 1111011222 2366777777777666 44455799999999994 555555543333466667788888876
No 75
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=95.60 E-value=0.058 Score=48.16 Aligned_cols=102 Identities=12% Similarity=0.104 Sum_probs=66.8
Q ss_pred EEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchh-hccccccccCccccccccccCCCCccCChHHHHHHHHH
Q 019704 74 LVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLA 152 (337)
Q Consensus 74 l~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~-~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~ 152 (337)
-|+++++|=|.++....+. -.... ..++..|+.| |-+ - .. .. ..+-++.|+.+.+
T Consensus 2 ~lf~~p~~gG~~~~y~~la-----------------~~l~~~~~~v~~i~~~-~~~--~--~~-~~-~~si~~la~~y~~ 57 (229)
T PF00975_consen 2 PLFCFPPAGGSASSYRPLA-----------------RALPDDVIGVYGIEYP-GRG--D--DE-PP-PDSIEELASRYAE 57 (229)
T ss_dssp EEEEESSTTCSGGGGHHHH-----------------HHHTTTEEEEEEECST-TSC--T--TS-HE-ESSHHHHHHHHHH
T ss_pred eEEEEcCCccCHHHHHHHH-----------------HhCCCCeEEEEEEecC-CCC--C--CC-CC-CCCHHHHHHHHHH
Confidence 5788898878665522221 01222 4678889988 554 1 11 11 2355667777666
Q ss_pred HHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 153 FLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 153 fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
.|+ +..| ..|++|+|.|+||..+=.+|+++.++ ....+.+++.++..
T Consensus 58 ~I~---~~~~---~gp~~L~G~S~Gg~lA~E~A~~Le~~--G~~v~~l~liD~~~ 104 (229)
T PF00975_consen 58 AIR---ARQP---EGPYVLAGWSFGGILAFEMARQLEEA--GEEVSRLILIDSPP 104 (229)
T ss_dssp HHH---HHTS---SSSEEEEEETHHHHHHHHHHHHHHHT--T-SESEEEEESCSS
T ss_pred Hhh---hhCC---CCCeeehccCccHHHHHHHHHHHHHh--hhccCceEEecCCC
Confidence 665 3444 23999999999999999999999876 36688899888653
No 76
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=95.54 E-value=0.057 Score=49.15 Aligned_cols=40 Identities=18% Similarity=0.195 Sum_probs=31.0
Q ss_pred CCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 163 EYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 163 ~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
....+++|++|.|-||...-.|+...-+. +.++++..|.-
T Consensus 93 ~iD~~RVyv~G~S~Gg~ma~~la~~~pd~-----faa~a~~sG~~ 132 (220)
T PF10503_consen 93 NIDPSRVYVTGLSNGGMMANVLACAYPDL-----FAAVAVVSGVP 132 (220)
T ss_pred ccCCCceeeEEECHHHHHHHHHHHhCCcc-----ceEEEeecccc
Confidence 55567899999999998777777655543 78888888763
No 77
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=95.27 E-value=0.034 Score=45.50 Aligned_cols=93 Identities=22% Similarity=0.290 Sum_probs=57.7
Q ss_pred EEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhh-ccccccccCccccccccccCCCCccCChHHHHHHHHH
Q 019704 74 LVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKE-ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLA 152 (337)
Q Consensus 74 l~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~-an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~ 152 (337)
+||+++|+.|.... +..+. ..+.+. .+++.+|.| +.|-+.. ...++++++
T Consensus 1 ~vv~~HG~~~~~~~-~~~~~----------------~~l~~~G~~v~~~~~~-~~~~~~~-----------~~~~~~~~~ 51 (145)
T PF12695_consen 1 VVVLLHGWGGSRRD-YQPLA----------------EALAEQGYAVVAFDYP-GHGDSDG-----------ADAVERVLA 51 (145)
T ss_dssp EEEEECTTTTTTHH-HHHHH----------------HHHHHTTEEEEEESCT-TSTTSHH-----------SHHHHHHHH
T ss_pred CEEEECCCCCCHHH-HHHHH----------------HHHHHCCCEEEEEecC-CCCccch-----------hHHHHHHHH
Confidence 58999998776544 22221 133333 667888887 6665511 112233333
Q ss_pred HHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 153 FLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 153 fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
.+. +..+ ..++++|+|+|.||..+..++.+- -.+++++..+|+
T Consensus 52 ~~~---~~~~--~~~~i~l~G~S~Gg~~a~~~~~~~------~~v~~~v~~~~~ 94 (145)
T PF12695_consen 52 DIR---AGYP--DPDRIILIGHSMGGAIAANLAARN------PRVKAVVLLSPY 94 (145)
T ss_dssp HHH---HHHC--TCCEEEEEEETHHHHHHHHHHHHS------TTESEEEEESES
T ss_pred HHH---hhcC--CCCcEEEEEEccCcHHHHHHhhhc------cceeEEEEecCc
Confidence 332 3333 457899999999999777777633 348999999985
No 78
>KOG1454 consensus Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=95.22 E-value=0.067 Score=51.55 Aligned_cols=101 Identities=20% Similarity=0.279 Sum_probs=62.3
Q ss_pred CCCCEEEEEcC-CCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHH
Q 019704 70 ASKPLVLWLNG-GPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (337)
Q Consensus 70 ~~~Pl~lwlnG-GPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~ 148 (337)
.++|-||.++| |-++.+-. + ...+.++....-++=||-| |-|+|-..+. ...-+++
T Consensus 56 ~~~~pvlllHGF~~~~~~w~-----~-----------~~~~L~~~~~~~v~aiDl~-G~g~~s~~~~------~~~y~~~ 112 (326)
T KOG1454|consen 56 KDKPPVLLLHGFGASSFSWR-----R-----------VVPLLSKAKGLRVLAIDLP-GHGYSSPLPR------GPLYTLR 112 (326)
T ss_pred CCCCcEEEeccccCCcccHh-----h-----------hccccccccceEEEEEecC-CCCcCCCCCC------CCceehh
Confidence 46788899998 44444331 1 1122334433557889988 7664322221 1112345
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEE
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIA 201 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ 201 (337)
+..+-++.|+.. +...+++|+|+||||..+-.+|....+. +++++
T Consensus 113 ~~v~~i~~~~~~---~~~~~~~lvghS~Gg~va~~~Aa~~P~~-----V~~lv 157 (326)
T KOG1454|consen 113 ELVELIRRFVKE---VFVEPVSLVGHSLGGIVALKAAAYYPET-----VDSLV 157 (326)
T ss_pred HHHHHHHHHHHh---hcCcceEEEEeCcHHHHHHHHHHhCccc-----cccee
Confidence 556666666664 3466899999999999998888886665 55565
No 79
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=95.16 E-value=0.18 Score=48.68 Aligned_cols=129 Identities=14% Similarity=0.103 Sum_probs=69.3
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhh-h------hhccc-CCCCCCCCCccccccccchhhccccccccCcc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIG-A------GAFCE-HGPFKPSGDTLLRNEYSWNKEANMLYLESPAG 126 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~-~------g~~~e-~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g 126 (337)
+..++|.-.... ++..+|.||.+||=.|.+-.. + |.+.. +|| ...--.+...|+-+|.| |
T Consensus 15 ~~~~~y~~~g~~-~~~~~~~vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~----------~~~l~~~~~~vi~~D~~-G 82 (351)
T TIGR01392 15 DVRVAYETYGTL-NAERSNAVLVCHALTGDAHVAGYHDDGDPGWWDDLIGP----------GRAIDTDRYFVVCSNVL-G 82 (351)
T ss_pred CceEEEEecccc-CCCCCCEEEEcCCcCcchhhcccCCCCCCCchhhccCC----------CCCcCCCceEEEEecCC-C
Confidence 456777643221 123458999999877755320 0 01100 011 00001244689999999 6
Q ss_pred --cccccccc----CCCCc----cCChHHHHHHHHHHHHHHHHHCCCCCCCc-eEEEeeccccccHHHHHHHHHHhcccc
Q 019704 127 --VGFSYSAN----KSFYG----SVNDAIAARDNLAFLEGWYEKFPEYKNRE-FFITGESYAGHYVPQLAQLIIQSNMKL 195 (337)
Q Consensus 127 --~GfSy~~~----~~~~~----~~~~~~~a~~~~~fl~~f~~~fp~~~~~~-~~i~GeSYgG~yvp~~a~~i~~~n~~i 195 (337)
.|-|-..+ ...+. ..+-+..++++..++ +.. .-.+ +.|+|+|+||..+-.+|.+--+.
T Consensus 83 ~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~l---~~~~~~~l~G~S~Gg~ia~~~a~~~p~~---- 151 (351)
T TIGR01392 83 GCYGSTGPSSINPGGRPYGSDFPLITIRDDVKAQKLLL----DHL---GIEQIAAVVGGSMGGMQALEWAIDYPER---- 151 (351)
T ss_pred CCCCCCCCCCCCCCCCcCCCCCCCCcHHHHHHHHHHHH----HHc---CCCCceEEEEECHHHHHHHHHHHHChHh----
Confidence 44332100 00110 012233444444444 433 2345 99999999998888887664433
Q ss_pred ccceEEEeCccc
Q 019704 196 NLKGIAIGNPLL 207 (337)
Q Consensus 196 nLkGi~igng~~ 207 (337)
++++++.++..
T Consensus 152 -v~~lvl~~~~~ 162 (351)
T TIGR01392 152 -VRAIVVLATSA 162 (351)
T ss_pred -hheEEEEccCC
Confidence 88999888754
No 80
>KOG4391 consensus Predicted alpha/beta hydrolase BEM46 [General function prediction only]
Probab=94.96 E-value=0.052 Score=49.14 Aligned_cols=130 Identities=20% Similarity=0.278 Sum_probs=81.9
Q ss_pred EEecCCCCceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccc
Q 019704 48 ITIDEKQQRALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGV 127 (337)
Q Consensus 48 l~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~ 127 (337)
|++.....-.|.=|.+.+++ .+|.+|+++|--|= +|-+ ... ..-.=-+-..||+-+|-. |.
T Consensus 57 i~l~T~D~vtL~a~~~~~E~---S~pTlLyfh~NAGN----mGhr------~~i-----~~~fy~~l~mnv~ivsYR-GY 117 (300)
T KOG4391|consen 57 IELRTRDKVTLDAYLMLSES---SRPTLLYFHANAGN----MGHR------LPI-----ARVFYVNLKMNVLIVSYR-GY 117 (300)
T ss_pred EEEEcCcceeEeeeeecccC---CCceEEEEccCCCc----ccch------hhH-----HHHHHHHcCceEEEEEee-cc
Confidence 34433333456644444443 78999999986652 2322 000 011111335688999977 99
Q ss_pred cccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 128 GFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 128 GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
|-|-+.....- .+-|.++|- .++-..|...++++.+.|.|-||.-+-.+|..-.+. +.++++-|-++
T Consensus 118 G~S~GspsE~G-L~lDs~avl-------dyl~t~~~~dktkivlfGrSlGGAvai~lask~~~r-----i~~~ivENTF~ 184 (300)
T KOG4391|consen 118 GKSEGSPSEEG-LKLDSEAVL-------DYLMTRPDLDKTKIVLFGRSLGGAVAIHLASKNSDR-----ISAIIVENTFL 184 (300)
T ss_pred ccCCCCccccc-eeccHHHHH-------HHHhcCccCCcceEEEEecccCCeeEEEeeccchhh-----eeeeeeechhc
Confidence 98876543211 233444332 334568899999999999999998888877666553 88999999887
Q ss_pred Cc
Q 019704 208 EF 209 (337)
Q Consensus 208 d~ 209 (337)
+-
T Consensus 185 SI 186 (300)
T KOG4391|consen 185 SI 186 (300)
T ss_pred cc
Confidence 64
No 81
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=94.80 E-value=0.33 Score=45.91 Aligned_cols=51 Identities=20% Similarity=0.182 Sum_probs=40.9
Q ss_pred CCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcccccchhh
Q 019704 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDFNSRA 217 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~~~~~~~ 217 (337)
.+.+.|+|+|-||+-+-.+|....+. ....+++.++..|++|......++.
T Consensus 151 p~~i~v~GdSAGG~La~~~a~~~~~~-~~~~p~~~~li~P~~d~~~~~~~~~ 201 (312)
T COG0657 151 PSRIAVAGDSAGGHLALALALAARDR-GLPLPAAQVLISPLLDLTSSAASLP 201 (312)
T ss_pred ccceEEEecCcccHHHHHHHHHHHhc-CCCCceEEEEEecccCCcccccchh
Confidence 56799999999999999999988875 3366899999999999876333333
No 82
>PLN02872 triacylglycerol lipase
Probab=94.72 E-value=0.11 Score=51.43 Aligned_cols=140 Identities=16% Similarity=0.095 Sum_probs=77.0
Q ss_pred CCCCccccCCCCC-------CCCcceEEEEEEecCCCCceEEEEEeeccC---CCCCCCEEEEEcCCCChhhhhhhhccc
Q 019704 25 PQADKIISLPGQP-------QASFQQYAGYITIDEKQQRALFYYFVEAAT---EAASKPLVLWLNGGPGCSSIGAGAFCE 94 (337)
Q Consensus 25 ~~~~~v~~lpg~~-------~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~---~~~~~Pl~lwlnGGPG~Ss~~~g~~~e 94 (337)
.+..++..-|.++ ..++....-+++..+ +-.|-.+-++..+ .+..+|.||.+||..++|... .+
T Consensus 19 ~~~~~~~~~~~~t~~~~~i~~~gy~~e~h~v~T~D--Gy~L~l~ri~~~~~~~~~~~~~~Vll~HGl~~ss~~w-~~--- 92 (395)
T PLN02872 19 GQSNLLRRSPVESLCAQLIHPAGYSCTEHTIQTKD--GYLLALQRVSSRNPRLGSQRGPPVLLQHGLFMAGDAW-FL--- 92 (395)
T ss_pred cccccccCCCchhhHHHHHHHcCCCceEEEEECCC--CcEEEEEEcCCCCCCCCCCCCCeEEEeCcccccccce-ee---
Confidence 3556666667665 235666666666543 2334333333221 234578999999988877652 11
Q ss_pred CCCCCCCCCccccccccchh-hccccccccCccccccccccC-----CCCccCChHHHH-HHHHHHHHHHHHHCCCCCCC
Q 019704 95 HGPFKPSGDTLLRNEYSWNK-EANMLYLESPAGVGFSYSANK-----SFYGSVNDAIAA-RDNLAFLEGWYEKFPEYKNR 167 (337)
Q Consensus 95 ~GP~~~~~~~~~~n~~sW~~-~an~l~iDqP~g~GfSy~~~~-----~~~~~~~~~~~a-~~~~~fl~~f~~~fp~~~~~ 167 (337)
++|-+ .+ .+-..+ -..+.-.|.+ |.|+|+.... ..+-..+-.+.| .|+-++++...+.- .+
T Consensus 93 ~~~~~----sl---a~~La~~GydV~l~n~R-G~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~~~----~~ 160 (395)
T PLN02872 93 NSPEQ----SL---GFILADHGFDVWVGNVR-GTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYSIT----NS 160 (395)
T ss_pred cCccc----ch---HHHHHhCCCCccccccc-ccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHhcc----CC
Confidence 12210 00 001122 2467778877 8888865221 111011233445 67777777665432 35
Q ss_pred ceEEEeeccccccHH
Q 019704 168 EFFITGESYAGHYVP 182 (337)
Q Consensus 168 ~~~i~GeSYgG~yvp 182 (337)
+++++|+|.||..+-
T Consensus 161 ~v~~VGhS~Gg~~~~ 175 (395)
T PLN02872 161 KIFIVGHSQGTIMSL 175 (395)
T ss_pred ceEEEEECHHHHHHH
Confidence 899999999996543
No 83
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=94.66 E-value=0.19 Score=50.04 Aligned_cols=99 Identities=19% Similarity=0.157 Sum_probs=58.8
Q ss_pred hccccccccCcccccccccc---CCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHh
Q 019704 115 EANMLYLESPAGVGFSYSAN---KSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS 191 (337)
Q Consensus 115 ~an~l~iDqP~g~GfSy~~~---~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~ 191 (337)
.|-|+++|.. =-|-|.... .....--+.+++-.|+..|++.+-.+++...+.|+.++|-||||.-+.-+-.+--.
T Consensus 59 ~a~~v~lEHR-yYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw~r~kyP~- 136 (434)
T PF05577_consen 59 GALVVALEHR-YYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAWFRLKYPH- 136 (434)
T ss_dssp TEEEEEE--T-TSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHHHHHH-TT-
T ss_pred CCcEEEeehh-hhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHHHHhhCCC-
Confidence 4567888877 666665321 11111235677789999999998888876677799999999999644433322222
Q ss_pred ccccccceEEEeCcccCcccccchhhhH
Q 019704 192 NMKLNLKGIAIGNPLLEFNTDFNSRAEF 219 (337)
Q Consensus 192 n~~inLkGi~igng~~d~~~~~~~~~~~ 219 (337)
+ +.|.+--++.+....++..|.+-
T Consensus 137 ---~-~~ga~ASSapv~a~~df~~y~~~ 160 (434)
T PF05577_consen 137 ---L-FDGAWASSAPVQAKVDFWEYFEV 160 (434)
T ss_dssp ---T--SEEEEET--CCHCCTTTHHHHH
T ss_pred ---e-eEEEEeccceeeeecccHHHHHH
Confidence 2 56777777877777666555543
No 84
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=94.49 E-value=0.19 Score=46.96 Aligned_cols=116 Identities=19% Similarity=0.293 Sum_probs=70.3
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCC----CCccCChHHHH
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKS----FYGSVNDAIAA 147 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~----~~~~~~~~~~a 147 (337)
+++++|+-|-||.-.. +--|.+ .+..+ .+....++=+... |+|...... .....+-+++.
T Consensus 2 ~~li~~IPGNPGlv~f-Y~~Fl~---------~L~~~---l~~~~~i~~ish~---Gh~~~~~~~~~~~~~~~~sL~~QI 65 (266)
T PF10230_consen 2 RPLIVFIPGNPGLVEF-YEEFLS---------ALYEK---LNPQFEILGISHA---GHSTSPSNSKFSPNGRLFSLQDQI 65 (266)
T ss_pred cEEEEEECCCCChHHH-HHHHHH---------HHHHh---CCCCCeeEEecCC---CCcCCcccccccCCCCccCHHHHH
Confidence 5899999999999876 322211 01111 0334444444433 555433220 11123567777
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc--ccccceEEEeCcccC
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM--KLNLKGIAIGNPLLE 208 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~--~inLkGi~igng~~d 208 (337)
+.-.+|++++....+ ..+.+++|+|||-|+. ++.+|+++.. +.+++++++.=|.+.
T Consensus 66 ~hk~~~i~~~~~~~~-~~~~~liLiGHSIGay----i~levl~r~~~~~~~V~~~~lLfPTi~ 123 (266)
T PF10230_consen 66 EHKIDFIKELIPQKN-KPNVKLILIGHSIGAY----IALEVLKRLPDLKFRVKKVILLFPTIE 123 (266)
T ss_pred HHHHHHHHHHhhhhc-CCCCcEEEEeCcHHHH----HHHHHHHhccccCCceeEEEEeCCccc
Confidence 888899999887664 2357899999999875 5555555543 467777777666554
No 85
>PRK11460 putative hydrolase; Provisional
Probab=94.48 E-value=0.19 Score=45.72 Aligned_cols=52 Identities=6% Similarity=-0.098 Sum_probs=31.5
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 150 ~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
+.++++.+.++. ....++++|+|.|.||..+-.++.+- .+ .+.+++..+|.+
T Consensus 87 l~~~i~~~~~~~-~~~~~~i~l~GfS~Gg~~al~~a~~~----~~-~~~~vv~~sg~~ 138 (232)
T PRK11460 87 FIETVRYWQQQS-GVGASATALIGFSQGAIMALEAVKAE----PG-LAGRVIAFSGRY 138 (232)
T ss_pred HHHHHHHHHHhc-CCChhhEEEEEECHHHHHHHHHHHhC----CC-cceEEEEecccc
Confidence 344444443333 34456899999999998876665431 11 245576677754
No 86
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=94.31 E-value=0.19 Score=50.70 Aligned_cols=37 Identities=27% Similarity=0.242 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHH
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLA 185 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a 185 (337)
...++++++-.+.|. -..+++.|+|+|.||+-+-.++
T Consensus 158 ~~al~wv~~~i~~fg-gd~~~v~~~G~SaG~~~~~~~~ 194 (493)
T cd00312 158 RLALKWVQDNIAAFG-GDPDSVTIFGESAGGASVSLLL 194 (493)
T ss_pred HHHHHHHHHHHHHhC-CCcceEEEEeecHHHHHhhhHh
Confidence 445677777777774 3356899999999997554433
No 87
>KOG1838 consensus Alpha/beta hydrolase [General function prediction only]
Probab=94.04 E-value=0.38 Score=47.52 Aligned_cols=109 Identities=18% Similarity=0.299 Sum_probs=69.1
Q ss_pred CCCCCEEEEEcCCCChhhhh-----hhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCCh
Q 019704 69 AASKPLVLWLNGGPGCSSIG-----AGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVND 143 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~-----~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~ 143 (337)
..++|+++.+.|=.|.|.-. ....++.| ++ ++-+. +-|.|-|--++..-|. ...
T Consensus 122 ~~~~P~vvilpGltg~S~~~YVr~lv~~a~~~G-~r------------------~VVfN-~RG~~g~~LtTpr~f~-ag~ 180 (409)
T KOG1838|consen 122 DGTDPIVVILPGLTGGSHESYVRHLVHEAQRKG-YR------------------VVVFN-HRGLGGSKLTTPRLFT-AGW 180 (409)
T ss_pred CCCCcEEEEecCCCCCChhHHHHHHHHHHHhCC-cE------------------EEEEC-CCCCCCCccCCCceee-cCC
Confidence 46789999999999887431 22334444 33 22222 3487777665554442 233
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc-cccceEEEeCccc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK-LNLKGIAIGNPLL 207 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~-inLkGi~igng~~ 207 (337)
. +|+-++++---++|| .+++|.+|.|+||.. +.+++-+..++ --..|++|-|||-
T Consensus 181 t---~Dl~~~v~~i~~~~P---~a~l~avG~S~Gg~i---L~nYLGE~g~~~~l~~a~~v~~Pwd 236 (409)
T KOG1838|consen 181 T---EDLREVVNHIKKRYP---QAPLFAVGFSMGGNI---LTNYLGEEGDNTPLIAAVAVCNPWD 236 (409)
T ss_pred H---HHHHHHHHHHHHhCC---CCceEEEEecchHHH---HHHHhhhccCCCCceeEEEEeccch
Confidence 2 345555555457888 568999999999964 56666665444 3367888999983
No 88
>COG4099 Predicted peptidase [General function prediction only]
Probab=93.46 E-value=0.98 Score=42.90 Aligned_cols=127 Identities=18% Similarity=0.182 Sum_probs=68.1
Q ss_pred CCCceEEEEEeecc-CCCCCC--CEEEEEcCC-CChhhh------hhhhcccCCCCCCCCCccccccccchhhccccccc
Q 019704 53 KQQRALFYYFVEAA-TEAASK--PLVLWLNGG-PGCSSI------GAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLE 122 (337)
Q Consensus 53 ~~~~~lfy~f~~s~-~~~~~~--Pl~lwlnGG-PG~Ss~------~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iD 122 (337)
..+..|-|-++.-+ -+|+++ ||+|||||+ -|.+-. ++|...+.||=. =.||=
T Consensus 169 ~tgneLkYrly~Pkdy~pdkky~PLvlfLHgagq~g~dn~~~l~sg~gaiawa~ped------------------qcfVl 230 (387)
T COG4099 169 STGNELKYRLYTPKDYAPDKKYYPLVLFLHGAGQGGSDNDKVLSSGIGAIAWAGPED------------------QCFVL 230 (387)
T ss_pred ccCceeeEEEecccccCCCCccccEEEEEecCCCCCchhhhhhhcCccceeeecccC------------------ceEEE
Confidence 34667888766543 244443 999999984 444322 245555555511 03444
Q ss_pred cCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEE
Q 019704 123 SPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAI 202 (337)
Q Consensus 123 qP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~i 202 (337)
.|- |+-.-+.++ ...+ .--....+.+..=+...++...+.+|++|-|-||.=.=+++.+..+. +.+.+.
T Consensus 231 APQ---y~~if~d~e--~~t~-~~l~~~idli~~vlas~ynID~sRIYviGlSrG~~gt~al~~kfPdf-----FAaa~~ 299 (387)
T COG4099 231 APQ---YNPIFADSE--EKTL-LYLIEKIDLILEVLASTYNIDRSRIYVIGLSRGGFGTWALAEKFPDF-----FAAAVP 299 (387)
T ss_pred ccc---ccccccccc--cccc-hhHHHHHHHHHHHHhhccCcccceEEEEeecCcchhhHHHHHhCchh-----hheeee
Confidence 441 221000000 0011 01112234444444556677778899999999998766666655543 667766
Q ss_pred eCcccC
Q 019704 203 GNPLLE 208 (337)
Q Consensus 203 gng~~d 208 (337)
..|--|
T Consensus 300 iaG~~d 305 (387)
T COG4099 300 IAGGGD 305 (387)
T ss_pred ecCCCc
Confidence 666544
No 89
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=93.15 E-value=0.21 Score=45.73 Aligned_cols=61 Identities=8% Similarity=0.128 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc----cccceEEEeCcccCcc
Q 019704 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK----LNLKGIAIGNPLLEFN 210 (337)
Q Consensus 147 a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~----inLkGi~igng~~d~~ 210 (337)
+.++.+||+...+.. ..++++|.+||.|+.-+-..-..+...... -+|..|++.+|.+|..
T Consensus 76 ~~~l~~~L~~L~~~~---~~~~I~ilaHSMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d 140 (233)
T PF05990_consen 76 GPALARFLRDLARAP---GIKRIHILAHSMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDND 140 (233)
T ss_pred HHHHHHHHHHHHhcc---CCceEEEEEeCchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHH
Confidence 444555555443332 356899999999999888877777766431 4788999999998864
No 90
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=92.87 E-value=0.2 Score=44.14 Aligned_cols=45 Identities=22% Similarity=0.301 Sum_probs=38.4
Q ss_pred CCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 164 YKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 164 ~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
+...+++|+|+|-||+.+-.++..+.+.. ...++++++..|++|.
T Consensus 68 ~d~~~i~l~G~SAGg~la~~~~~~~~~~~-~~~~~~~~~~~p~~d~ 112 (211)
T PF07859_consen 68 IDPERIVLIGDSAGGHLALSLALRARDRG-LPKPKGIILISPWTDL 112 (211)
T ss_dssp EEEEEEEEEEETHHHHHHHHHHHHHHHTT-TCHESEEEEESCHSST
T ss_pred ccccceEEeecccccchhhhhhhhhhhhc-ccchhhhhcccccccc
Confidence 44668999999999999999998887753 3459999999999887
No 91
>PRK11071 esterase YqiA; Provisional
Probab=92.75 E-value=0.23 Score=43.86 Aligned_cols=48 Identities=23% Similarity=0.304 Sum_probs=33.0
Q ss_pred HHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 151 ~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
.+++.++.+.. ..++++|+|.|.||.++-.+|.+.- .+ +++.||..+|
T Consensus 48 ~~~l~~l~~~~---~~~~~~lvG~S~Gg~~a~~~a~~~~-------~~-~vl~~~~~~~ 95 (190)
T PRK11071 48 AELLESLVLEH---GGDPLGLVGSSLGGYYATWLSQCFM-------LP-AVVVNPAVRP 95 (190)
T ss_pred HHHHHHHHHHc---CCCCeEEEEECHHHHHHHHHHHHcC-------CC-EEEECCCCCH
Confidence 34455555543 3458999999999999888886532 23 4667887775
No 92
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=92.56 E-value=0.35 Score=39.72 Aligned_cols=59 Identities=25% Similarity=0.322 Sum_probs=44.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc--cccceEEEeCccc
Q 019704 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK--LNLKGIAIGNPLL 207 (337)
Q Consensus 146 ~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~--inLkGi~igng~~ 207 (337)
..+.+.+.|++..++.| ..++.|+|||-||-.+..+|..+.++... .+++-+..|.|-+
T Consensus 46 ~~~~~~~~l~~~~~~~~---~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 46 LYDQILDALKELVEKYP---DYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHHHHhccc---CccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 34566777777778887 45799999999999999999999886544 6677777777655
No 93
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=92.34 E-value=0.042 Score=53.07 Aligned_cols=103 Identities=17% Similarity=0.241 Sum_probs=58.4
Q ss_pred CCCCCEEEEEcC-CCCh-hhhhhhhcccCCCCCCCCCccccccccch-hhccccccccCccccccccccCCCCccCChHH
Q 019704 69 AASKPLVLWLNG-GPGC-SSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFSYSANKSFYGSVNDAI 145 (337)
Q Consensus 69 ~~~~Pl~lwlnG-GPG~-Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~ 145 (337)
..++|++|.+|| ...+ +...+- .+..+-.... ...||+.||--.++.-.|... ..+...
T Consensus 68 n~~~pt~iiiHGw~~~~~~~~~~~-------------~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a-----~~n~~~ 129 (331)
T PF00151_consen 68 NPSKPTVIIIHGWTGSGSSESWIQ-------------DMIKALLQKDTGDYNVIVVDWSRGASNNYPQA-----VANTRL 129 (331)
T ss_dssp -TTSEEEEEE--TT-TT-TTTHHH-------------HHHHHHHCC--S-EEEEEEE-HHHHSS-HHHH-----HHHHHH
T ss_pred CCCCCeEEEEcCcCCcccchhHHH-------------HHHHHHHhhccCCceEEEEcchhhccccccch-----hhhHHH
Confidence 457899999998 2222 111110 1111212221 467999999665554444321 234455
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHH
Q 019704 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 146 ~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 190 (337)
+++.+..||+.....+ .+...+++|+|+|.|+|.+-.+++++..
T Consensus 130 vg~~la~~l~~L~~~~-g~~~~~ihlIGhSLGAHvaG~aG~~~~~ 173 (331)
T PF00151_consen 130 VGRQLAKFLSFLINNF-GVPPENIHLIGHSLGAHVAGFAGKYLKG 173 (331)
T ss_dssp HHHHHHHHHHHHHHHH----GGGEEEEEETCHHHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHHhhc-CCChhHEEEEeeccchhhhhhhhhhccC
Confidence 6777777777766443 3335689999999999999999988876
No 94
>KOG1552 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=92.04 E-value=0.77 Score=42.57 Aligned_cols=110 Identities=18% Similarity=0.230 Sum_probs=69.0
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHH
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~ 148 (337)
....+.+|+.+|- + .++|-..| ...+.|=.=..|++=.|-- |.|.|-++... .|.-+..+
T Consensus 57 ~~~~~~lly~hGN---a-~Dlgq~~~-----------~~~~l~~~ln~nv~~~DYS-GyG~S~G~psE----~n~y~Di~ 116 (258)
T KOG1552|consen 57 EAAHPTLLYSHGN---A-ADLGQMVE-----------LFKELSIFLNCNVVSYDYS-GYGRSSGKPSE----RNLYADIK 116 (258)
T ss_pred cccceEEEEcCCc---c-cchHHHHH-----------HHHHHhhcccceEEEEecc-cccccCCCccc----ccchhhHH
Confidence 3345999999986 1 12221111 0133333345677778866 99999876542 24444456
Q ss_pred HHHHHHHHHHHHCCCC-CCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCccc
Q 019704 149 DNLAFLEGWYEKFPEY-KNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~-~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~ 211 (337)
..++.|++ ++ +..++.|+|.|-|..- +-.+..+.. +.|+++-+|+++-..
T Consensus 117 avye~Lr~------~~g~~~~Iil~G~SiGt~~----tv~Lasr~~---~~alVL~SPf~S~~r 167 (258)
T KOG1552|consen 117 AVYEWLRN------RYGSPERIILYGQSIGTVP----TVDLASRYP---LAAVVLHSPFTSGMR 167 (258)
T ss_pred HHHHHHHh------hcCCCceEEEEEecCCchh----hhhHhhcCC---cceEEEeccchhhhh
Confidence 67777775 44 5678999999999863 223333322 999999999987543
No 95
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.93 E-value=0.52 Score=39.70 Aligned_cols=58 Identities=17% Similarity=0.239 Sum_probs=39.0
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 146 ~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
.++.+...+++..+.+| ..+++|+|+|.||..+-.+|.++.++...-.++-+..|.|-
T Consensus 10 ~~~~i~~~~~~~~~~~p---~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~ 67 (153)
T cd00741 10 LANLVLPLLKSALAQYP---DYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPR 67 (153)
T ss_pred HHHHHHHHHHHHHHHCC---CCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCc
Confidence 34455556666666667 45799999999999999999988765322234444555443
No 96
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=91.12 E-value=0.57 Score=42.27 Aligned_cols=57 Identities=19% Similarity=0.299 Sum_probs=42.7
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
+++...++...+++| ..+++++|||-||-.+..+|..+.++....+++.+..|.|-+
T Consensus 112 ~~~~~~~~~~~~~~p---~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 112 NQVLPELKSALKQYP---DYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHHHHHHHHHHhhCC---CceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 444556666666666 457999999999999999898887654345678888887765
No 97
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=90.99 E-value=0.31 Score=43.58 Aligned_cols=57 Identities=16% Similarity=0.010 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 147 a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
++.+.+++....+.. ...++++|.|-|-||..+-.++.+-. -.+.|++..+|++-..
T Consensus 87 ~~~l~~li~~~~~~~--i~~~ri~l~GFSQGa~~al~~~l~~p-----~~~~gvv~lsG~~~~~ 143 (216)
T PF02230_consen 87 AERLDELIDEEVAYG--IDPSRIFLGGFSQGAAMALYLALRYP-----EPLAGVVALSGYLPPE 143 (216)
T ss_dssp HHHHHHHHHHHHHTT----GGGEEEEEETHHHHHHHHHHHCTS-----STSSEEEEES---TTG
T ss_pred HHHHHHHHHHHHHcC--CChhheehhhhhhHHHHHHHHHHHcC-----cCcCEEEEeecccccc
Confidence 344445555544332 45668999999999987666664332 2589999999997554
No 98
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=90.72 E-value=0.4 Score=42.46 Aligned_cols=41 Identities=22% Similarity=0.317 Sum_probs=33.2
Q ss_pred CCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcccccc
Q 019704 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDFN 214 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~~~~ 214 (337)
...+.|+|.|.||.|+-.+|.+. +++. ++.||.++|...+.
T Consensus 58 ~~~~~liGSSlGG~~A~~La~~~-------~~~a-vLiNPav~p~~~l~ 98 (187)
T PF05728_consen 58 PENVVLIGSSLGGFYATYLAERY-------GLPA-VLINPAVRPYELLQ 98 (187)
T ss_pred CCCeEEEEEChHHHHHHHHHHHh-------CCCE-EEEcCCCCHHHHHH
Confidence 44599999999999999998765 3665 78899999876554
No 99
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=90.19 E-value=0.63 Score=50.05 Aligned_cols=86 Identities=17% Similarity=0.256 Sum_probs=54.3
Q ss_pred chhhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCC--------------CCCCCceEEEeeccc
Q 019704 112 WNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFP--------------EYKNREFFITGESYA 177 (337)
Q Consensus 112 W~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp--------------~~~~~~~~i~GeSYg 177 (337)
..+=.++|++|.+ |+|-|-+.-. .......+|..+.++ |+...+ .+.+.++-++|.||+
T Consensus 276 ~~rGYaVV~~D~R-Gtg~SeG~~~-----~~~~~E~~D~~~vIe-Wl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~ 348 (767)
T PRK05371 276 LPRGFAVVYVSGI-GTRGSDGCPT-----TGDYQEIESMKAVID-WLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYL 348 (767)
T ss_pred HhCCeEEEEEcCC-CCCCCCCcCc-----cCCHHHHHHHHHHHH-HHhhCCccccccccccccccCCCCCeeEEEEEcHH
Confidence 3346789999977 9999866421 122223345444443 655321 233458999999999
Q ss_pred cccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 178 GHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 178 G~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
|...-.+|..-. -.||.|+-..|+.|.
T Consensus 349 G~~~~~aAa~~p-----p~LkAIVp~a~is~~ 375 (767)
T PRK05371 349 GTLPNAVATTGV-----EGLETIIPEAAISSW 375 (767)
T ss_pred HHHHHHHHhhCC-----CcceEEEeeCCCCcH
Confidence 986665554332 249999988877663
No 100
>PLN02454 triacylglycerol lipase
Probab=90.08 E-value=0.82 Score=45.39 Aligned_cols=63 Identities=21% Similarity=0.322 Sum_probs=49.1
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc---ccccceEEEeCccc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM---KLNLKGIAIGNPLL 207 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~---~inLkGi~igng~~ 207 (337)
....+++...++...+++|..+ ..++|+|||.||-.+-..|..|..... .++++.+..|.|-+
T Consensus 206 ~S~r~qvl~~V~~l~~~Yp~~~-~sI~vTGHSLGGALAtLaA~di~~~g~~~~~~~V~~~TFGsPRV 271 (414)
T PLN02454 206 LSARSQLLAKIKELLERYKDEK-LSIVLTGHSLGASLATLAAFDIVENGVSGADIPVTAIVFGSPQV 271 (414)
T ss_pred HHHHHHHHHHHHHHHHhCCCCC-ceEEEEecCHHHHHHHHHHHHHHHhcccccCCceEEEEeCCCcc
Confidence 3456788899999999998764 359999999999999999988876432 25677788887765
No 101
>PRK13604 luxD acyl transferase; Provisional
Probab=89.88 E-value=1.9 Score=41.23 Aligned_cols=125 Identities=9% Similarity=0.031 Sum_probs=71.6
Q ss_pred CCceEEEEEeecc-CCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCcccccccc
Q 019704 54 QQRALFYYFVEAA-TEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYS 132 (337)
Q Consensus 54 ~~~~lfy~f~~s~-~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~ 132 (337)
.+..|.=|+...+ +++...|++|..+| .|+....+ ...-.+=+.+=.++|-.|.--|.|=|-+
T Consensus 18 dG~~L~Gwl~~P~~~~~~~~~~vIi~HG-f~~~~~~~---------------~~~A~~La~~G~~vLrfD~rg~~GeS~G 81 (307)
T PRK13604 18 NGQSIRVWETLPKENSPKKNNTILIASG-FARRMDHF---------------AGLAEYLSSNGFHVIRYDSLHHVGLSSG 81 (307)
T ss_pred CCCEEEEEEEcCcccCCCCCCEEEEeCC-CCCChHHH---------------HHHHHHHHHCCCEEEEecCCCCCCCCCC
Confidence 3567776766654 34566788888765 44432211 1112344566778999997755687733
Q ss_pred ccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 133 ANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 133 ~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
.- .+.........+....++++ .. ...++.|.|+|.||..+...|. ..+++++++..|..+.
T Consensus 82 ~~-~~~t~s~g~~Dl~aaid~lk----~~---~~~~I~LiG~SmGgava~~~A~-------~~~v~~lI~~sp~~~l 143 (307)
T PRK13604 82 TI-DEFTMSIGKNSLLTVVDWLN----TR---GINNLGLIAASLSARIAYEVIN-------EIDLSFLITAVGVVNL 143 (307)
T ss_pred cc-ccCcccccHHHHHHHHHHHH----hc---CCCceEEEEECHHHHHHHHHhc-------CCCCCEEEEcCCcccH
Confidence 21 11111111222222344443 32 1357999999999987433332 2358999999999883
No 102
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=89.24 E-value=0.39 Score=44.58 Aligned_cols=84 Identities=19% Similarity=0.139 Sum_probs=54.7
Q ss_pred hccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc
Q 019704 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK 194 (337)
Q Consensus 115 ~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~ 194 (337)
=..+|.+|.. |+|-|-+.-.. .....++|.++.+ +|+..-|- .+-++-++|.||+|...-.+|..-.
T Consensus 57 GY~vV~~D~R-G~g~S~G~~~~-----~~~~e~~D~~d~I-~W~~~Qpw-s~G~VGm~G~SY~G~~q~~~A~~~~----- 123 (272)
T PF02129_consen 57 GYAVVVQDVR-GTGGSEGEFDP-----MSPNEAQDGYDTI-EWIAAQPW-SNGKVGMYGISYGGFTQWAAAARRP----- 123 (272)
T ss_dssp T-EEEEEE-T-TSTTS-S-B-T-----TSHHHHHHHHHHH-HHHHHCTT-EEEEEEEEEETHHHHHHHHHHTTT------
T ss_pred CCEEEEECCc-ccccCCCcccc-----CChhHHHHHHHHH-HHHHhCCC-CCCeEEeeccCHHHHHHHHHHhcCC-----
Confidence 4568999977 99999764321 1334456666554 46666654 3447999999999998777775333
Q ss_pred cccceEEEeCcccCccc
Q 019704 195 LNLKGIAIGNPLLEFNT 211 (337)
Q Consensus 195 inLkGi~igng~~d~~~ 211 (337)
-.||.|+..-+..|...
T Consensus 124 p~LkAi~p~~~~~d~~~ 140 (272)
T PF02129_consen 124 PHLKAIVPQSGWSDLYR 140 (272)
T ss_dssp TTEEEEEEESE-SBTCC
T ss_pred CCceEEEecccCCcccc
Confidence 34999999988887654
No 103
>COG0400 Predicted esterase [General function prediction only]
Probab=87.00 E-value=2.7 Score=37.83 Aligned_cols=61 Identities=15% Similarity=0.210 Sum_probs=44.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
...+..+.+||....+.+ ....+++++.|-|=|+.++-.+...--+ .++|+++-.|..-+.
T Consensus 77 ~~~~~~~~~~l~~~~~~~-gi~~~~ii~~GfSqGA~ial~~~l~~~~-----~~~~ail~~g~~~~~ 137 (207)
T COG0400 77 DLETEKLAEFLEELAEEY-GIDSSRIILIGFSQGANIALSLGLTLPG-----LFAGAILFSGMLPLE 137 (207)
T ss_pred HHHHHHHHHHHHHHHHHh-CCChhheEEEecChHHHHHHHHHHhCch-----hhccchhcCCcCCCC
Confidence 345667788888888877 3445789999999999877666544433 488888888876544
No 104
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=86.75 E-value=1.2 Score=43.94 Aligned_cols=51 Identities=10% Similarity=-0.005 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHHHCCCCCCCceE-EEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFF-ITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~-i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
+|+.+.+..+++.. .-+++. |+|+|+||+.+-.+|.+--+. ++++++.++.
T Consensus 144 ~d~~~~~~~ll~~l---gi~~~~~vvG~SmGG~ial~~a~~~P~~-----v~~lv~ia~~ 195 (389)
T PRK06765 144 LDFVRVQKELIKSL---GIARLHAVMGPSMGGMQAQEWAVHYPHM-----VERMIGVIGN 195 (389)
T ss_pred HHHHHHHHHHHHHc---CCCCceEEEEECHHHHHHHHHHHHChHh-----hheEEEEecC
Confidence 33444444444433 334676 999999999998888776664 7788887654
No 105
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=86.51 E-value=1.8 Score=43.77 Aligned_cols=32 Identities=19% Similarity=0.205 Sum_probs=23.1
Q ss_pred HHHHHHHHHHCCCCCCCceEEEeeccccccHHH
Q 019704 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQ 183 (337)
Q Consensus 151 ~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~ 183 (337)
++.+++..+.|-.= .+.+-|+|||-|++-|-.
T Consensus 165 LkWV~~NIe~FGGD-p~NVTl~GeSAGa~si~~ 196 (491)
T COG2272 165 LKWVRDNIEAFGGD-PQNVTLFGESAGAASILT 196 (491)
T ss_pred HHHHHHHHHHhCCC-ccceEEeeccchHHHHHH
Confidence 56777777777433 346999999999976544
No 106
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=85.88 E-value=1.5 Score=43.30 Aligned_cols=61 Identities=20% Similarity=0.188 Sum_probs=45.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCC-CceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKN-REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~-~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
-++|-|...+|..-.+.||.+.. -|+.+.|.|||| |...|+.+|.=. .+.||+=-+++.-|
T Consensus 160 IMqAiD~INAl~~l~k~~~~~~~~lp~I~~G~s~G~-yla~l~~k~aP~----~~~~~iDns~~~~p 221 (403)
T PF11144_consen 160 IMQAIDIINALLDLKKIFPKNGGGLPKIYIGSSHGG-YLAHLCAKIAPW----LFDGVIDNSSYALP 221 (403)
T ss_pred HHHHHHHHHHHHHHHHhhhcccCCCcEEEEecCcHH-HHHHHHHhhCcc----ceeEEEecCccccc
Confidence 46789999999999999999975 689999999987 667777666532 25555555555555
No 107
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=85.23 E-value=1.8 Score=38.55 Aligned_cols=65 Identities=9% Similarity=0.218 Sum_probs=51.7
Q ss_pred CChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 141 VNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 141 ~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
.+.+++|.|+-+.++.+.++. +.+++.|+|-|+|.-.+|.+..++-.. .+=.++++++..+-...
T Consensus 45 rtP~~~a~Dl~~~i~~y~~~w---~~~~vvLiGYSFGADvlP~~~nrLp~~-~r~~v~~v~Ll~p~~~~ 109 (192)
T PF06057_consen 45 RTPEQTAADLARIIRHYRARW---GRKRVVLIGYSFGADVLPFIYNRLPAA-LRARVAQVVLLSPSTTA 109 (192)
T ss_pred CCHHHHHHHHHHHHHHHHHHh---CCceEEEEeecCCchhHHHHHhhCCHH-HHhheeEEEEeccCCcc
Confidence 467889999999999988865 477899999999999999999998653 22347888887765443
No 108
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=85.20 E-value=1.3 Score=39.84 Aligned_cols=43 Identities=19% Similarity=0.262 Sum_probs=34.0
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHh
Q 019704 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS 191 (337)
Q Consensus 147 a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~ 191 (337)
-.|+..+++.|++.+++ +|||.|+|||=|+..+-.|-+...+.
T Consensus 77 y~DV~~AF~~yL~~~n~--GRPfILaGHSQGs~~l~~LL~e~~~~ 119 (207)
T PF11288_consen 77 YSDVRAAFDYYLANYNN--GRPFILAGHSQGSMHLLRLLKEEIAG 119 (207)
T ss_pred HHHHHHHHHHHHHhcCC--CCCEEEEEeChHHHHHHHHHHHHhcC
Confidence 36788899999998864 78999999999998776666555443
No 109
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=84.81 E-value=4.8 Score=45.46 Aligned_cols=103 Identities=12% Similarity=0.104 Sum_probs=63.9
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHH
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNL 151 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~ 151 (337)
.|-++.++|+.|.+.....+.. .......++-+|.| |.|-+. .. ..+-++.|+++.
T Consensus 1068 ~~~l~~lh~~~g~~~~~~~l~~-----------------~l~~~~~v~~~~~~-g~~~~~---~~---~~~l~~la~~~~ 1123 (1296)
T PRK10252 1068 GPTLFCFHPASGFAWQFSVLSR-----------------YLDPQWSIYGIQSP-RPDGPM---QT---ATSLDEVCEAHL 1123 (1296)
T ss_pred CCCeEEecCCCCchHHHHHHHH-----------------hcCCCCcEEEEECC-CCCCCC---CC---CCCHHHHHHHHH
Confidence 3668889998887665211110 11233566777888 655331 11 124556667776
Q ss_pred HHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 152 ~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
..++. ..| ..++.++|+|+||..+-.+|.++.++. ..+..+++.++.
T Consensus 1124 ~~i~~---~~~---~~p~~l~G~S~Gg~vA~e~A~~l~~~~--~~v~~l~l~~~~ 1170 (1296)
T PRK10252 1124 ATLLE---QQP---HGPYHLLGYSLGGTLAQGIAARLRARG--EEVAFLGLLDTW 1170 (1296)
T ss_pred HHHHh---hCC---CCCEEEEEechhhHHHHHHHHHHHHcC--CceeEEEEecCC
Confidence 66653 222 358999999999999999998886643 346666666553
No 110
>KOG4627 consensus Kynurenine formamidase [Amino acid transport and metabolism]
Probab=84.67 E-value=0.68 Score=41.76 Aligned_cols=109 Identities=16% Similarity=0.184 Sum_probs=70.6
Q ss_pred CCCCCEEEEEcCCC---ChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHH
Q 019704 69 AASKPLVLWLNGGP---GCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAI 145 (337)
Q Consensus 69 ~~~~Pl~lwlnGGP---G~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~ 145 (337)
...+||.++++||= |--++. +.-.|| ...|.|.- +-+||-+++. ....++
T Consensus 64 ~~~~klfIfIHGGYW~~g~rk~c---lsiv~~-------a~~~gY~v------------asvgY~l~~q-----~htL~q 116 (270)
T KOG4627|consen 64 TNQAKLFIFIHGGYWQEGDRKMC---LSIVGP-------AVRRGYRV------------ASVGYNLCPQ-----VHTLEQ 116 (270)
T ss_pred CCCccEEEEEecchhhcCchhcc---cchhhh-------hhhcCeEE------------EEeccCcCcc-----cccHHH
Confidence 35679999999984 111111 011122 23355542 3466666543 235678
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 146 ~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+..++.++++--++.+|.-+ .+-+.|||-|.|-+.....++.+ -.+.|+++..|+-+-.
T Consensus 117 t~~~~~~gv~filk~~~n~k--~l~~gGHSaGAHLa~qav~R~r~----prI~gl~l~~GvY~l~ 175 (270)
T KOG4627|consen 117 TMTQFTHGVNFILKYTENTK--VLTFGGHSAGAHLAAQAVMRQRS----PRIWGLILLCGVYDLR 175 (270)
T ss_pred HHHHHHHHHHHHHHhcccce--eEEEcccchHHHHHHHHHHHhcC----chHHHHHHHhhHhhHH
Confidence 88899999988888887643 49999999999876666665432 4478888888876543
No 111
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=84.05 E-value=2.9 Score=44.96 Aligned_cols=98 Identities=15% Similarity=0.135 Sum_probs=55.0
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccch-hhccccccccCcccccc-cccc--------CC--CCc
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWN-KEANMLYLESPAGVGFS-YSAN--------KS--FYG 139 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~-~~an~l~iDqP~g~GfS-y~~~--------~~--~~~ 139 (337)
.|+|+++||=.|.......+. ..+. +-..++-+|.| |.|-| ...+ .+ .|-
T Consensus 449 ~P~VVllHG~~g~~~~~~~lA-----------------~~La~~Gy~VIaiDlp-GHG~S~~~~~~~~~~a~~~~~~~y~ 510 (792)
T TIGR03502 449 WPVVIYQHGITGAKENALAFA-----------------GTLAAAGVATIAIDHP-LHGARSFDANASGVNATNANVLAYM 510 (792)
T ss_pred CcEEEEeCCCCCCHHHHHHHH-----------------HHHHhCCcEEEEeCCC-CCCccccccccccccccccCcccee
Confidence 589999998666554311111 0111 12446777877 77776 3210 00 010
Q ss_pred c--------CChHHHHHHHHHHHHHHH---------HHCCCCCCCceEEEeeccccccHHHHHHH
Q 019704 140 S--------VNDAIAARDNLAFLEGWY---------EKFPEYKNREFFITGESYAGHYVPQLAQL 187 (337)
Q Consensus 140 ~--------~~~~~~a~~~~~fl~~f~---------~~fp~~~~~~~~i~GeSYgG~yvp~~a~~ 187 (337)
. .+-.+.+.|++......- ..+..+...++++.|||.||.....++..
T Consensus 511 Nl~~l~~aRDn~rQ~v~Dll~L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~ 575 (792)
T TIGR03502 511 NLASLLVARDNLRQSILDLLGLRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAY 575 (792)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHh
Confidence 0 133555667665444322 12334556799999999999988887743
No 112
>PLN02571 triacylglycerol lipase
Probab=83.75 E-value=2.9 Score=41.55 Aligned_cols=62 Identities=18% Similarity=0.172 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHh--c-------cccccceEEEeCccc
Q 019704 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS--N-------MKLNLKGIAIGNPLL 207 (337)
Q Consensus 145 ~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~--n-------~~inLkGi~igng~~ 207 (337)
.+.++++..|+.+.+++|.. ..+++|+|||.||-.+-..|..|... | ..+.+..+..|.|-+
T Consensus 205 Sar~qvl~eV~~L~~~y~~e-~~sI~VTGHSLGGALAtLaA~dl~~~g~n~~~~~~~~~~~V~v~TFGsPRV 275 (413)
T PLN02571 205 SARDQVLNEVGRLVEKYKDE-EISITICGHSLGAALATLNAVDIVANGFNRSKSRPNKSCPVTAFVFASPRV 275 (413)
T ss_pred hHHHHHHHHHHHHHHhcCcc-cccEEEeccchHHHHHHHHHHHHHHhcccccccccccCcceEEEEeCCCCc
Confidence 34477888899988888865 34799999999999999999888652 1 124566677776654
No 113
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=83.57 E-value=9.9 Score=36.73 Aligned_cols=120 Identities=22% Similarity=0.287 Sum_probs=68.6
Q ss_pred CceEEEEEeeccCCCCCCCEEEEEcCCCChhhhh-----hhhcccCCCCCCCCCccccccccchhhccccccccCccccc
Q 019704 55 QRALFYYFVEAATEAASKPLVLWLNGGPGCSSIG-----AGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGF 129 (337)
Q Consensus 55 ~~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~-----~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~Gf 129 (337)
+--.+.|... ......|+++-++|=-|.|.-. ...+.+-| ..++-.+-. |-|.
T Consensus 60 ~~~~ldw~~~--p~~~~~P~vVl~HGL~G~s~s~y~r~L~~~~~~rg-------------------~~~Vv~~~R-gcs~ 117 (345)
T COG0429 60 GFIDLDWSED--PRAAKKPLVVLFHGLEGSSNSPYARGLMRALSRRG-------------------WLVVVFHFR-GCSG 117 (345)
T ss_pred CEEEEeeccC--ccccCCceEEEEeccCCCCcCHHHHHHHHHHHhcC-------------------CeEEEEecc-cccC
Confidence 4455666433 1234559999999966666321 11222222 234455544 5555
Q ss_pred cccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc-cccceEEEeCcc
Q 019704 130 SYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK-LNLKGIAIGNPL 206 (337)
Q Consensus 130 Sy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~-inLkGi~igng~ 206 (337)
+-.....-| ...+. +|+..||..-.++|| .+|+|.+|-|.|| -.+|.++.+.... ...+++++-+|+
T Consensus 118 ~~n~~p~~y-h~G~t---~D~~~~l~~l~~~~~---~r~~~avG~SLGg---nmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 118 EANTSPRLY-HSGET---EDIRFFLDWLKARFP---PRPLYAVGFSLGG---NMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred CcccCccee-cccch---hHHHHHHHHHHHhCC---CCceEEEEecccH---HHHHHHHHhhccCcccceeeeeeCHH
Confidence 543333333 12233 455555554445676 6899999999999 4678888776554 345666666665
No 114
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=82.38 E-value=2.9 Score=40.50 Aligned_cols=94 Identities=21% Similarity=0.239 Sum_probs=54.7
Q ss_pred CCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchh-----hccccccccCccccccccccCCCCccC
Q 019704 67 TEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNK-----EANMLYLESPAGVGFSYSANKSFYGSV 141 (337)
Q Consensus 67 ~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~-----~an~l~iDqP~g~GfSy~~~~~~~~~~ 141 (337)
.+++++-.+|+.||--+ +.|+==+ +..-...|.+ .+|++...-| |||+|.+..
T Consensus 132 ~~a~~~RWiL~s~GNg~--------~~E~~~~------~~~~~~~~~~~ak~~~aNvl~fNYp-GVg~S~G~~------- 189 (365)
T PF05677_consen 132 PEAKPQRWILVSNGNGE--------CYENRAM------LDYKDDWIQRFAKELGANVLVFNYP-GVGSSTGPP------- 189 (365)
T ss_pred CCCCCCcEEEEEcCChH--------Hhhhhhh------hccccHHHHHHHHHcCCcEEEECCC-ccccCCCCC-------
Confidence 35678899999997422 2232000 0011223443 5799999988 999996543
Q ss_pred ChHHHHHHHHHHHHHHHHHCC-CCCCCceEEEeeccccccHHH
Q 019704 142 NDAIAARDNLAFLEGWYEKFP-EYKNREFFITGESYAGHYVPQ 183 (337)
Q Consensus 142 ~~~~~a~~~~~fl~~f~~~fp-~~~~~~~~i~GeSYgG~yvp~ 183 (337)
+-++.+++ ++++.++++..+ .-+.+.+.+-|+|-||-....
T Consensus 190 s~~dLv~~-~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~ 231 (365)
T PF05677_consen 190 SRKDLVKD-YQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAE 231 (365)
T ss_pred CHHHHHHH-HHHHHHHHHhcccCCChheEEEeeccccHHHHHH
Confidence 22222222 334444554433 234578999999999975443
No 115
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=81.50 E-value=2.4 Score=39.89 Aligned_cols=36 Identities=22% Similarity=0.352 Sum_probs=29.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGH 179 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~ 179 (337)
.++++.+.+.+......-|+=..-++|+.|||-|..
T Consensus 86 ~~a~~aL~~aV~~~~~~lP~~~RPkL~l~GeSLGa~ 121 (289)
T PF10081_consen 86 REAARALFEAVYARWSTLPEDRRPKLYLYGESLGAY 121 (289)
T ss_pred HHHHHHHHHHHHHHHHhCCcccCCeEEEeccCcccc
Confidence 456788899999888888887766899999997653
No 116
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=81.23 E-value=4.8 Score=40.10 Aligned_cols=36 Identities=8% Similarity=0.063 Sum_probs=26.1
Q ss_pred CceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 167 REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 167 ~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
....|+|.|+||.-+-.+|.+-.+. +.+++..+|.+
T Consensus 288 ~~~~IaG~S~GGl~AL~~al~~Pd~-----Fg~v~s~Sgs~ 323 (411)
T PRK10439 288 DRTVVAGQSFGGLAALYAGLHWPER-----FGCVLSQSGSF 323 (411)
T ss_pred cceEEEEEChHHHHHHHHHHhCccc-----ccEEEEeccce
Confidence 4689999999998766666544332 67788888764
No 117
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=79.59 E-value=14 Score=34.92 Aligned_cols=104 Identities=22% Similarity=0.313 Sum_probs=65.1
Q ss_pred CCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhcc--ccccccCccccccccccCCCCccCChHH
Q 019704 68 EAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEAN--MLYLESPAGVGFSYSANKSFYGSVNDAI 145 (337)
Q Consensus 68 ~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an--~l~iDqP~g~GfSy~~~~~~~~~~~~~~ 145 (337)
..+...+|+=++|-||+=- ++=. --++...++ ++=|.-| |-|++-......+ +|.+
T Consensus 31 ~gs~~gTVv~~hGsPGSH~-DFkY-----------------i~~~l~~~~iR~I~iN~P-Gf~~t~~~~~~~~--~n~e- 88 (297)
T PF06342_consen 31 SGSPLGTVVAFHGSPGSHN-DFKY-----------------IRPPLDEAGIRFIGINYP-GFGFTPGYPDQQY--TNEE- 88 (297)
T ss_pred CCCCceeEEEecCCCCCcc-chhh-----------------hhhHHHHcCeEEEEeCCC-CCCCCCCCccccc--ChHH-
Confidence 3445568999999999542 1110 012334444 3556678 7777754333333 2332
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 146 ~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
-..|...+++.- +.+ .++.+.|||-|+--+-.+|... .+.|+++.||.
T Consensus 89 ----r~~~~~~ll~~l-~i~-~~~i~~gHSrGcenal~la~~~-------~~~g~~lin~~ 136 (297)
T PF06342_consen 89 ----RQNFVNALLDEL-GIK-GKLIFLGHSRGCENALQLAVTH-------PLHGLVLINPP 136 (297)
T ss_pred ----HHHHHHHHHHHc-CCC-CceEEEEeccchHHHHHHHhcC-------ccceEEEecCC
Confidence 345666666655 444 5788999999998777777655 37899999975
No 118
>PRK04940 hypothetical protein; Provisional
Probab=77.99 E-value=3.6 Score=36.28 Aligned_cols=40 Identities=20% Similarity=0.248 Sum_probs=32.1
Q ss_pred CceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcccccc
Q 019704 167 REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDFN 214 (337)
Q Consensus 167 ~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~~~~ 214 (337)
+++.|+|.|-||.|+-.+|.+-- ++ .+|.||.+.|...+.
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g-------~~-aVLiNPAv~P~~~L~ 99 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCG-------IR-QVIFNPNLFPEENME 99 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHC-------CC-EEEECCCCChHHHHH
Confidence 47999999999999999997743 55 567799999965443
No 119
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=77.44 E-value=4.1 Score=39.16 Aligned_cols=54 Identities=11% Similarity=0.057 Sum_probs=36.0
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
++..+++...+..+ ..+++++|+|+||..+-.++..-.+ .++++++.++.+|..
T Consensus 121 ~~~~~v~~l~~~~~---~~~i~lvGhS~GG~i~~~~~~~~~~-----~v~~lv~~~~p~~~~ 174 (350)
T TIGR01836 121 YIDKCVDYICRTSK---LDQISLLGICQGGTFSLCYAALYPD-----KIKNLVTMVTPVDFE 174 (350)
T ss_pred HHHHHHHHHHHHhC---CCcccEEEECHHHHHHHHHHHhCch-----heeeEEEeccccccC
Confidence 34455555555543 4689999999999876655543221 378888888877753
No 120
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=77.41 E-value=5 Score=40.37 Aligned_cols=40 Identities=18% Similarity=0.096 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHH
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQ 186 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~ 186 (337)
.+..+++.+.++..++..+ .+++.|+|||.||..+-.++.
T Consensus 142 ~~~~~~Lk~lIe~~~~~~g---~~kV~LVGHSMGGlva~~fl~ 181 (440)
T PLN02733 142 PETMDGLKKKLETVYKASG---GKKVNIISHSMGGLLVKCFMS 181 (440)
T ss_pred HHHHHHHHHHHHHHHHHcC---CCCEEEEEECHhHHHHHHHHH
Confidence 3455778888888887654 578999999999977666554
No 121
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=76.90 E-value=12 Score=31.89 Aligned_cols=76 Identities=13% Similarity=0.166 Sum_probs=47.6
Q ss_pred hccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc
Q 019704 115 EANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK 194 (337)
Q Consensus 115 ~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~ 194 (337)
..+++-+|.| |.|.+-.. ....+..++.....+. +..+ ..++.++|+|+||..+-.+|..+..+.
T Consensus 25 ~~~v~~~~~~-g~~~~~~~------~~~~~~~~~~~~~~l~---~~~~---~~~~~l~g~s~Gg~~a~~~a~~l~~~~-- 89 (212)
T smart00824 25 RRDVSALPLP-GFGPGEPL------PASADALVEAQAEAVL---RAAG---GRPFVLVGHSSGGLLAHAVAARLEARG-- 89 (212)
T ss_pred CccEEEecCC-CCCCCCCC------CCCHHHHHHHHHHHHH---HhcC---CCCeEEEEECHHHHHHHHHHHHHHhCC--
Confidence 4577888877 55543211 1123334444444443 2333 468999999999999999999887643
Q ss_pred cccceEEEeCc
Q 019704 195 LNLKGIAIGNP 205 (337)
Q Consensus 195 inLkGi~igng 205 (337)
..++++++.+.
T Consensus 90 ~~~~~l~~~~~ 100 (212)
T smart00824 90 IPPAAVVLLDT 100 (212)
T ss_pred CCCcEEEEEcc
Confidence 34677766654
No 122
>PF03283 PAE: Pectinacetylesterase
Probab=76.82 E-value=14 Score=36.16 Aligned_cols=147 Identities=20% Similarity=0.237 Sum_probs=73.2
Q ss_pred eEEEEEeeccCCCCCCCEEEEEcCCCChhhhh---hhhcccCCCCCC-------C---CCccccccccchhhcccccccc
Q 019704 57 ALFYYFVEAATEAASKPLVLWLNGGPGCSSIG---AGAFCEHGPFKP-------S---GDTLLRNEYSWNKEANMLYLES 123 (337)
Q Consensus 57 ~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~---~g~~~e~GP~~~-------~---~~~~~~n~~sW~~~an~l~iDq 123 (337)
.-.|++-+.. ....+-+||.|.||=.|.+.. .-..++.|-... . .+....||.=++ .|+|||=-
T Consensus 36 ~~~yy~~~g~-g~~s~~~li~leGGG~C~~~~tC~~r~~t~~gss~~~~~~~~~~Gils~~~~~Np~f~~--wN~V~vpY 112 (361)
T PF03283_consen 36 PPGYYFRPGS-GSGSNKWLIFLEGGGWCWDAETCAQRSSTNLGSSKNWPKTFAFSGILSNDPAENPDFYN--WNHVFVPY 112 (361)
T ss_pred CCcEEEccCC-CCCCceEEEEeccchhcCChhHHhhhccCccccccchhhhccccccccCCcccCCcccc--ccEEEEEe
Confidence 3345454442 345679999999999998752 112234443221 1 112345663222 56677743
Q ss_pred CccccccccccCCCCccCChHHHHHHHH-HHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhcc-ccccceE
Q 019704 124 PAGVGFSYSANKSFYGSVNDAIAARDNL-AFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNM-KLNLKGI 200 (337)
Q Consensus 124 P~g~GfSy~~~~~~~~~~~~~~~a~~~~-~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~-~inLkGi 200 (337)
=.|.-|+=......+....---....++ ..|...++. +++ ..++.|+|.|-||.=+..-+.++.+.=. ...++++
T Consensus 113 C~Gd~~~G~~~~~~~~~~~l~frG~~i~~avl~~l~~~gl~~--a~~vlltG~SAGG~g~~~~~d~~~~~lp~~~~v~~~ 190 (361)
T PF03283_consen 113 CDGDSHSGDVEPVDYGGTTLYFRGYRILRAVLDDLLSNGLPN--AKQVLLTGCSAGGLGAILHADYVRDRLPSSVKVKCL 190 (361)
T ss_pred cCCccccCcccccccCCceeEeecHHHHHHHHHHHHHhcCcc--cceEEEeccChHHHHHHHHHHHHHHHhccCceEEEe
Confidence 3343333211100110000000123333 344444444 443 3479999999999888887888776522 2445544
Q ss_pred EEeCcccC
Q 019704 201 AIGNPLLE 208 (337)
Q Consensus 201 ~igng~~d 208 (337)
.=..-++|
T Consensus 191 ~DsG~f~d 198 (361)
T PF03283_consen 191 SDSGFFLD 198 (361)
T ss_pred cccccccc
Confidence 43333333
No 123
>PRK14567 triosephosphate isomerase; Provisional
Probab=76.06 E-value=8 Score=35.97 Aligned_cols=61 Identities=20% Similarity=0.256 Sum_probs=46.0
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
.+.++++..++++++..+-+-....+=|. |||-.-|.=+..|++. -++.|+.||.+.+|+.
T Consensus 178 ~e~i~~~~~~IR~~l~~~~~~~a~~v~Il---YGGSV~~~N~~~l~~~---~diDG~LVGgasL~~~ 238 (253)
T PRK14567 178 LEQIQETHQFIRSLLAKVDERLAKNIKIV---YGGSLKAENAKDILSL---PDVDGGLIGGASLKAA 238 (253)
T ss_pred HHHHHHHHHHHHHHHHhhcccccccceEE---EcCcCCHHHHHHHHcC---CCCCEEEeehhhhcHH
Confidence 45678889999999876522112234444 9999999999999876 3599999999998764
No 124
>PRK14566 triosephosphate isomerase; Provisional
Probab=75.71 E-value=7.5 Score=36.31 Aligned_cols=62 Identities=19% Similarity=0.280 Sum_probs=46.5
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 143 DAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+.+.|+++..|+++++...-....+.+=|. |||---|.-+..|++. -++.|+.||..-+|+.
T Consensus 187 t~e~a~~v~~~IR~~l~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~---~dIDG~LVGgASL~~~ 248 (260)
T PRK14566 187 TPEQAQEVHAFIRKRLSEVSPFIGENIRIL---YGGSVTPSNAADLFAQ---PDVDGGLIGGASLNST 248 (260)
T ss_pred CHHHHHHHHHHHHHHHHhcCccccccceEE---ecCCCCHhHHHHHhcC---CCCCeEEechHhcCHH
Confidence 345678899999999875421112234444 9999999999999876 3599999999988874
No 125
>PLN02847 triacylglycerol lipase
Probab=75.66 E-value=5.8 Score=41.20 Aligned_cols=52 Identities=13% Similarity=0.246 Sum_probs=36.2
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeC
Q 019704 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGN 204 (337)
Q Consensus 150 ~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ign 204 (337)
+...|++-++.+|.| ++.|+|||.||-.+..++..+.++..--+++.+..+-
T Consensus 237 i~~~L~kal~~~PdY---kLVITGHSLGGGVAALLAilLRe~~~fssi~CyAFgP 288 (633)
T PLN02847 237 STPCLLKALDEYPDF---KIKIVGHSLGGGTAALLTYILREQKEFSSTTCVTFAP 288 (633)
T ss_pred HHHHHHHHHHHCCCC---eEEEeccChHHHHHHHHHHHHhcCCCCCCceEEEecC
Confidence 334555666778866 5999999999998888876665432235667777764
No 126
>PLN02324 triacylglycerol lipase
Probab=75.08 E-value=8.1 Score=38.49 Aligned_cols=45 Identities=16% Similarity=0.057 Sum_probs=36.6
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHH
Q 019704 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 145 ~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 190 (337)
...+++...|+...+++|... ..++|+|||-||--+-..|..|..
T Consensus 194 SareqVl~eV~~L~~~Yp~e~-~sItvTGHSLGGALAtLaA~dl~~ 238 (415)
T PLN02324 194 SAQEQVQGELKRLLELYKNEE-ISITFTGHSLGAVMSVLSAADLVY 238 (415)
T ss_pred HHHHHHHHHHHHHHHHCCCCC-ceEEEecCcHHHHHHHHHHHHHHH
Confidence 445678888888888888542 369999999999999988888876
No 127
>PLN02753 triacylglycerol lipase
Probab=73.93 E-value=8.9 Score=39.26 Aligned_cols=65 Identities=18% Similarity=0.169 Sum_probs=46.6
Q ss_pred hHHHHHHHHHHHHHHHHHCCC--CCCCceEEEeeccccccHHHHHHHHHHh--cc-----ccccceEEEeCccc
Q 019704 143 DAIAARDNLAFLEGWYEKFPE--YKNREFFITGESYAGHYVPQLAQLIIQS--NM-----KLNLKGIAIGNPLL 207 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~fp~--~~~~~~~i~GeSYgG~yvp~~a~~i~~~--n~-----~inLkGi~igng~~ 207 (337)
...+.++++..++...+++|. .....++|+|||-||-.+-..|..|... |. .+++.-+..|.|-+
T Consensus 286 k~S~reQVl~eVkrLl~~Y~~e~~~~~sItVTGHSLGGALAtLaA~Dla~~g~n~~~~~~~~pV~vyTFGsPRV 359 (531)
T PLN02753 286 KFSAREQILTEVKRLVEEHGDDDDSDLSITVTGHSLGGALAILSAYDIAEMGLNRSKKGKVIPVTVLTYGGPRV 359 (531)
T ss_pred hhhHHHHHHHHHHHHHHHcccccCCCceEEEEccCHHHHHHHHHHHHHHHhcccccccCccCceEEEEeCCCCc
Confidence 344667888999998888864 2345799999999999999999888753 11 14455666665543
No 128
>PLN02310 triacylglycerol lipase
Probab=73.65 E-value=7.9 Score=38.46 Aligned_cols=62 Identities=16% Similarity=0.147 Sum_probs=41.5
Q ss_pred HHHHHHHHHHHHHHHCCCC-CCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 146 AARDNLAFLEGWYEKFPEY-KNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 146 ~a~~~~~fl~~f~~~fp~~-~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
..+++...++...+.+++- ....+.|+|||.||-.+-..|..|......+++.-+..|.|-+
T Consensus 187 a~~qVl~eV~~L~~~y~~~~e~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRV 249 (405)
T PLN02310 187 ASEQVMQEVKRLVNFYRGKGEEVSLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRV 249 (405)
T ss_pred HHHHHHHHHHHHHHhhcccCCcceEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCc
Confidence 3456677777777766532 2346999999999999988887776543334555555565544
No 129
>PLN02719 triacylglycerol lipase
Probab=72.55 E-value=9.3 Score=39.00 Aligned_cols=63 Identities=16% Similarity=0.214 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHCCCCC--CCceEEEeeccccccHHHHHHHHHHhc--c-----ccccceEEEeCccc
Q 019704 145 IAARDNLAFLEGWYEKFPEYK--NREFFITGESYAGHYVPQLAQLIIQSN--M-----KLNLKGIAIGNPLL 207 (337)
Q Consensus 145 ~~a~~~~~fl~~f~~~fp~~~--~~~~~i~GeSYgG~yvp~~a~~i~~~n--~-----~inLkGi~igng~~ 207 (337)
...++++..++...+++|... ...++|+|||-||-.+-..|..|.+.. . .+.+.-+..|.|-+
T Consensus 274 SaReQVl~eV~rL~~~Ypd~~ge~~sItVTGHSLGGALAtLaA~Dl~~~gln~~~~~~~~pVtvyTFGsPRV 345 (518)
T PLN02719 274 SAREQVLTEVKRLVERYGDEEGEELSITVTGHSLGGALAVLSAYDVAEMGLNRTRKGKVIPVTAFTYGGPRV 345 (518)
T ss_pred hHHHHHHHHHHHHHHHCCcccCCcceEEEecCcHHHHHHHHHHHHHHHhcccccccccccceEEEEecCCCc
Confidence 345778889999889898652 347999999999999999998887631 1 13455555565543
No 130
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=71.28 E-value=20 Score=37.02 Aligned_cols=85 Identities=13% Similarity=0.079 Sum_probs=50.7
Q ss_pred ccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcccc
Q 019704 116 ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKL 195 (337)
Q Consensus 116 an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~i 195 (337)
..++-||-+ |-|.|... . .-++-..+.+.++++.+.+.. ...+++++|+|.||..+...+..+......-
T Consensus 221 f~V~~iDwr-gpg~s~~~----~--~~ddY~~~~i~~al~~v~~~~---g~~kv~lvG~cmGGtl~a~ala~~aa~~~~~ 290 (532)
T TIGR01838 221 HTVFVISWR-NPDASQAD----K--TFDDYIRDGVIAALEVVEAIT---GEKQVNCVGYCIGGTLLSTALAYLAARGDDK 290 (532)
T ss_pred cEEEEEECC-CCCccccc----C--ChhhhHHHHHHHHHHHHHHhc---CCCCeEEEEECcCcHHHHHHHHHHHHhCCCC
Confidence 456677866 77766321 1 112223344566666665544 3568999999999998765333222221112
Q ss_pred ccceEEEeCcccCcc
Q 019704 196 NLKGIAIGNPLLEFN 210 (337)
Q Consensus 196 nLkGi~igng~~d~~ 210 (337)
.++++++.+..+|..
T Consensus 291 rv~slvll~t~~Df~ 305 (532)
T TIGR01838 291 RIKSATFFTTLLDFS 305 (532)
T ss_pred ccceEEEEecCcCCC
Confidence 488989888888864
No 131
>KOG4569 consensus Predicted lipase [Lipid transport and metabolism]
Probab=70.92 E-value=8.3 Score=37.30 Aligned_cols=55 Identities=24% Similarity=0.330 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc--cccceEEEeCcc
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK--LNLKGIAIGNPL 206 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~--inLkGi~igng~ 206 (337)
++.+-++.-...+|+ ..++++|||-||-.+...|..|...... ..++-+--|-|-
T Consensus 156 ~~~~~~~~L~~~~~~---~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 156 GLDAELRRLIELYPN---YSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPR 212 (336)
T ss_pred HHHHHHHHHHHhcCC---cEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCC
Confidence 344455555567774 4699999999999999999999986532 455555556543
No 132
>PLN02408 phospholipase A1
Probab=70.52 E-value=11 Score=36.85 Aligned_cols=46 Identities=13% Similarity=0.021 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHh
Q 019704 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS 191 (337)
Q Consensus 145 ~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~ 191 (337)
...+++.+.++...+.+|.. ...++|+|||.||-.+-..|..|...
T Consensus 179 s~r~qVl~eI~~ll~~y~~~-~~sI~vTGHSLGGALAtLaA~dl~~~ 224 (365)
T PLN02408 179 SLQEMVREEIARLLQSYGDE-PLSLTITGHSLGAALATLTAYDIKTT 224 (365)
T ss_pred hHHHHHHHHHHHHHHhcCCC-CceEEEeccchHHHHHHHHHHHHHHh
Confidence 34467788888888888865 24699999999999999888888764
No 133
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=70.25 E-value=14 Score=33.64 Aligned_cols=58 Identities=16% Similarity=0.090 Sum_probs=44.6
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc--cccceEEEeCcc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK--LNLKGIAIGNPL 206 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~--inLkGi~igng~ 206 (337)
++-++.+...+..+.. ..+++.|+|.|-|+..+-...+++.+.... =+++-+.+||+-
T Consensus 30 ~~G~~~L~~ai~~~~~-----~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP~ 89 (225)
T PF08237_consen 30 AEGVANLDAAIRAAIA-----AGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNPR 89 (225)
T ss_pred HHHHHHHHHHHHhhcc-----CCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCCC
Confidence 4445667777776554 478999999999999999999998874332 468899999874
No 134
>KOG2182 consensus Hydrolytic enzymes of the alpha/beta hydrolase fold [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=69.78 E-value=19 Score=36.57 Aligned_cols=69 Identities=19% Similarity=0.239 Sum_probs=43.7
Q ss_pred ChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcccccch
Q 019704 142 NDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTDFNS 215 (337)
Q Consensus 142 ~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~~~~~ 215 (337)
+..++-.|+.+|++.-=.+|+.-...|++.+|-||.|.-..-+-....+ + +.|-+--++-+....++..
T Consensus 147 Ss~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPe----l-~~GsvASSapv~A~~DF~E 215 (514)
T KOG2182|consen 147 SSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPE----L-TVGSVASSAPVLAKVDFYE 215 (514)
T ss_pred hHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCch----h-heeecccccceeEEecHHH
Confidence 4556668899999888888876655699999999998643333222222 1 3344444555666665543
No 135
>PLN02802 triacylglycerol lipase
Probab=69.70 E-value=11 Score=38.56 Aligned_cols=60 Identities=13% Similarity=0.134 Sum_probs=42.2
Q ss_pred HHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc-cccceEEEeCcc
Q 019704 146 AARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK-LNLKGIAIGNPL 206 (337)
Q Consensus 146 ~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~-inLkGi~igng~ 206 (337)
..+++..-++.+++++|.. ...++|+|||.||-.+-..|..|...... +.+.-+..|.|-
T Consensus 310 ~reqVl~eV~~Ll~~Y~~e-~~sI~VTGHSLGGALAtLaA~dL~~~~~~~~pV~vyTFGsPR 370 (509)
T PLN02802 310 LSESVVGEVRRLMEKYKGE-ELSITVTGHSLGAALALLVADELATCVPAAPPVAVFSFGGPR 370 (509)
T ss_pred HHHHHHHHHHHHHHhCCCC-cceEEEeccchHHHHHHHHHHHHHHhCCCCCceEEEEcCCCC
Confidence 4467778888888887643 23699999999999999988888764322 234455555543
No 136
>COG4425 Predicted membrane protein [Function unknown]
Probab=69.48 E-value=7.3 Score=39.06 Aligned_cols=37 Identities=24% Similarity=0.462 Sum_probs=31.6
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccc
Q 019704 143 DAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGH 179 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~ 179 (337)
-.++|+.+.+++-....+-|+=+.-++|+.|||-|.+
T Consensus 373 g~~aa~aLf~aVy~yw~qLP~~sRPKLylhG~SLGa~ 409 (588)
T COG4425 373 GADAARALFEAVYGYWTQLPKSSRPKLYLHGESLGAM 409 (588)
T ss_pred chhHHHHHHHHHHHHHHhCCcCCCCceEEeccccccc
Confidence 3567888999999999999988777899999998764
No 137
>PLN00413 triacylglycerol lipase
Probab=69.48 E-value=5.9 Score=40.05 Aligned_cols=39 Identities=21% Similarity=0.427 Sum_probs=31.7
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHH
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 190 (337)
++...|+..++.+|++ +++|+|||.||..+-..|..+..
T Consensus 269 ~i~~~Lk~ll~~~p~~---kliVTGHSLGGALAtLaA~~L~~ 307 (479)
T PLN00413 269 TILRHLKEIFDQNPTS---KFILSGHSLGGALAILFTAVLIM 307 (479)
T ss_pred HHHHHHHHHHHHCCCC---eEEEEecCHHHHHHHHHHHHHHh
Confidence 5667788888888854 69999999999998888877653
No 138
>KOG3975 consensus Uncharacterized conserved protein [Function unknown]
Probab=69.31 E-value=16 Score=34.10 Aligned_cols=49 Identities=22% Similarity=0.376 Sum_probs=30.2
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccc-cccceE
Q 019704 143 DAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMK-LNLKGI 200 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~-inLkGi 200 (337)
.+.+.+.=++|++++. | +++++||.|||=|. ++..+|+..++. .+++-.
T Consensus 91 L~~QV~HKlaFik~~~---P--k~~ki~iiGHSiGa----Ym~Lqil~~~k~~~~vqKa 140 (301)
T KOG3975|consen 91 LQDQVDHKLAFIKEYV---P--KDRKIYIIGHSIGA----YMVLQILPSIKLVFSVQKA 140 (301)
T ss_pred hhhHHHHHHHHHHHhC---C--CCCEEEEEecchhH----HHHHHHhhhcccccceEEE
Confidence 3445555667777654 3 46799999999875 555666654332 444333
No 139
>PLN02934 triacylglycerol lipase
Probab=68.27 E-value=7.5 Score=39.63 Aligned_cols=40 Identities=15% Similarity=0.254 Sum_probs=32.3
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHH
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 190 (337)
.++...|+.+++++|.+ +++++|||-||-.+-..|..+..
T Consensus 305 ~~v~~~lk~ll~~~p~~---kIvVTGHSLGGALAtLaA~~L~l 344 (515)
T PLN02934 305 YAVRSKLKSLLKEHKNA---KFVVTGHSLGGALAILFPTVLVL 344 (515)
T ss_pred HHHHHHHHHHHHHCCCC---eEEEeccccHHHHHHHHHHHHHH
Confidence 34667788888888864 69999999999988888877654
No 140
>KOG2281 consensus Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Posttranslational modification, protein turnover, chaperones]
Probab=68.21 E-value=11 Score=39.50 Aligned_cols=111 Identities=20% Similarity=0.304 Sum_probs=60.0
Q ss_pred CCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhc----------cccccccCcccc---cccc---c
Q 019704 70 ASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEA----------NMLYLESPAGVG---FSYS---A 133 (337)
Q Consensus 70 ~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~a----------n~l~iDqP~g~G---fSy~---~ 133 (337)
.+-|+++.+-||||.- ++.|.++|.+.- =|++||.. |+- .-+- +
T Consensus 640 kkYptvl~VYGGP~VQ-------------------lVnnsfkgi~ylR~~~LaslGy~Vv~IDnR-GS~hRGlkFE~~ik 699 (867)
T KOG2281|consen 640 KKYPTVLNVYGGPGVQ-------------------LVNNSFKGIQYLRFCRLASLGYVVVFIDNR-GSAHRGLKFESHIK 699 (867)
T ss_pred CCCceEEEEcCCCceE-------------------EeeccccceehhhhhhhhhcceEEEEEcCC-CccccchhhHHHHh
Confidence 3469999999999843 445777776532 24788855 321 1110 0
Q ss_pred cCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCccc
Q 019704 134 NKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (337)
Q Consensus 134 ~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~ 211 (337)
..-+. + .++|-.+-||-.-++.--..-..+-|-|-||||. |+...+.+-.+| +|-.+-|.|+++...
T Consensus 700 ~kmGq--V----E~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGY----LSlm~L~~~P~I-frvAIAGapVT~W~~ 766 (867)
T KOG2281|consen 700 KKMGQ--V----EVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGY----LSLMGLAQYPNI-FRVAIAGAPVTDWRL 766 (867)
T ss_pred hccCe--e----eehhhHHHHHHHHHhcCcccchheeEeccccccH----HHHHHhhcCcce-eeEEeccCcceeeee
Confidence 01111 1 1233344444433443211223589999999994 444444432223 555666788877653
No 141
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=67.84 E-value=14 Score=35.38 Aligned_cols=71 Identities=10% Similarity=0.059 Sum_probs=39.1
Q ss_pred CChHHHHHHHHHHHHHHHHHCCC-CCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCccc
Q 019704 141 VNDAIAARDNLAFLEGWYEKFPE-YKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (337)
Q Consensus 141 ~~~~~~a~~~~~fl~~f~~~fp~-~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~ 211 (337)
.+.+..++|+-..++-+-..... +..+++.|+|||-|-.=+-.+...-......-.++|+++-.|+-|.+.
T Consensus 81 ~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGHSTGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSDREa 152 (303)
T PF08538_consen 81 SSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGHSTGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSDREA 152 (303)
T ss_dssp --HHHHHHHHHHHHHHHHHHS------S-EEEEEECCHHHHHHHHHHH-TT---CCCEEEEEEEEE---TTS
T ss_pred chhhhHHHHHHHHHHHHHHhhccccCCccEEEEecCCCcHHHHHHHhccCccccccceEEEEEeCCCCChhH
Confidence 34455567776666555455322 345689999999998765544443322112467999999999988654
No 142
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=67.75 E-value=10 Score=36.97 Aligned_cols=46 Identities=7% Similarity=0.223 Sum_probs=35.5
Q ss_pred CCceEEEeeccccccHHHHHHHHHHhccc---cccceEEEeCcccCccc
Q 019704 166 NREFFITGESYAGHYVPQLAQLIIQSNMK---LNLKGIAIGNPLLEFNT 211 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~i~~~n~~---inLkGi~igng~~d~~~ 211 (337)
-+++||..||.|+--+-..-++|.-++.+ ..++-+++-.|-+|.+.
T Consensus 190 ~~~I~ilAHSMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~DV 238 (377)
T COG4782 190 VKRIYLLAHSMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDVDV 238 (377)
T ss_pred CceEEEEEecchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCChhh
Confidence 45799999999987777777777655544 56888999999888653
No 143
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=65.94 E-value=17 Score=34.83 Aligned_cols=47 Identities=23% Similarity=0.329 Sum_probs=34.5
Q ss_pred HHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccC
Q 019704 156 GWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (337)
Q Consensus 156 ~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d 208 (337)
.|+...|+...+.+.++|+|-||...-.+|. +.+ .++.++...|++.
T Consensus 164 d~l~slpevD~~rI~v~G~SqGG~lal~~aa-Ld~-----rv~~~~~~vP~l~ 210 (320)
T PF05448_consen 164 DFLRSLPEVDGKRIGVTGGSQGGGLALAAAA-LDP-----RVKAAAADVPFLC 210 (320)
T ss_dssp HHHHTSTTEEEEEEEEEEETHHHHHHHHHHH-HSS-----T-SEEEEESESSS
T ss_pred HHHHhCCCcCcceEEEEeecCchHHHHHHHH-hCc-----cccEEEecCCCcc
Confidence 3667889998889999999999976555544 322 2888888887653
No 144
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=65.86 E-value=18 Score=32.96 Aligned_cols=52 Identities=19% Similarity=0.243 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCc
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng 205 (337)
...++++...+.+++ +++|+|||=||..+-+.|..+.+... =.++.+..-||
T Consensus 70 ~A~~yl~~~~~~~~~----~i~v~GHSkGGnLA~yaa~~~~~~~~-~rI~~vy~fDg 121 (224)
T PF11187_consen 70 SALAYLKKIAKKYPG----KIYVTGHSKGGNLAQYAAANCDDEIQ-DRISKVYSFDG 121 (224)
T ss_pred HHHHHHHHHHHhCCC----CEEEEEechhhHHHHHHHHHccHHHh-hheeEEEEeeC
Confidence 345667777776653 59999999999988888877543211 12455555554
No 145
>PLN03037 lipase class 3 family protein; Provisional
Probab=65.47 E-value=14 Score=37.73 Aligned_cols=58 Identities=22% Similarity=0.236 Sum_probs=38.9
Q ss_pred HHHHHHHHHHHHHCCCC-CCCceEEEeeccccccHHHHHHHHHHhcccc-ccceEEEeCc
Q 019704 148 RDNLAFLEGWYEKFPEY-KNREFFITGESYAGHYVPQLAQLIIQSNMKL-NLKGIAIGNP 205 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~-~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~i-nLkGi~igng 205 (337)
+++...++...+.+++. ....++|+|||.||--+-..|..|......+ ++.-+..|.|
T Consensus 298 eQVl~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~DIa~~~p~~~~VtvyTFGsP 357 (525)
T PLN03037 298 EQVMEEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYEAARSVPALSNISVISFGAP 357 (525)
T ss_pred HHHHHHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHHHHHhCCCCCCeeEEEecCC
Confidence 56677777777777643 2346999999999999888887777643222 3444444444
No 146
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=65.24 E-value=12 Score=33.61 Aligned_cols=48 Identities=10% Similarity=0.086 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhc
Q 019704 144 AIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSN 192 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n 192 (337)
+..++.+.+.|.+..+..+.- .+++.++|||.||.++=.....+.+.+
T Consensus 56 ~~~g~rL~~eI~~~~~~~~~~-~~~IsfIgHSLGGli~r~al~~~~~~~ 103 (217)
T PF05057_consen 56 DVCGERLAEEILEHIKDYESK-IRKISFIGHSLGGLIARYALGLLHDKP 103 (217)
T ss_pred HHHHHHHHHHHHHhccccccc-cccceEEEecccHHHHHHHHHHhhhcc
Confidence 445777777777777666543 468999999999999876666666543
No 147
>PLN02429 triosephosphate isomerase
Probab=64.34 E-value=18 Score=34.74 Aligned_cols=61 Identities=18% Similarity=0.266 Sum_probs=45.4
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 144 AIAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
.+.++.+..++++|+.. +.+-....+-|. |||-.-|.-+..|... -++.|+.||.+.+++.
T Consensus 238 ~e~~~~v~~~IR~~l~~~~~~~va~~irIL---YGGSV~~~N~~el~~~---~diDG~LVGgASL~~~ 299 (315)
T PLN02429 238 PQQAQEVHVAVRGWLKKNVSEEVASKTRII---YGGSVNGGNSAELAKE---EDIDGFLVGGASLKGP 299 (315)
T ss_pred HHHHHHHHHHHHHHHHHHhhhhhccCceEE---EcCccCHHHHHHHhcC---CCCCEEEeecceecHH
Confidence 44567888999998864 432222344444 9999999999999875 4699999999998764
No 148
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=63.35 E-value=15 Score=34.36 Aligned_cols=63 Identities=17% Similarity=0.332 Sum_probs=38.5
Q ss_pred hHHHHHHHHHHHHHHH-HHC-----CCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 143 DAIAARDNLAFLEGWY-EKF-----PEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~-~~f-----p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
+.+.+.++.++|.+=+ ... |++ .++.|+|||=||+-+-.+|....+....+++++++..+|+=
T Consensus 63 ~~~~~~~vi~Wl~~~L~~~l~~~v~~D~--s~l~l~GHSrGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 63 EVASAAEVIDWLAKGLESKLPLGVKPDF--SKLALAGHSRGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred hHHHHHHHHHHHHhcchhhccccccccc--cceEEeeeCCCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 4445556666554411 222 233 25999999999995555554443322237899999988763
No 149
>PLN02162 triacylglycerol lipase
Probab=62.64 E-value=12 Score=37.87 Aligned_cols=39 Identities=13% Similarity=0.233 Sum_probs=30.0
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHH
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 190 (337)
.+.+.|+..++++|+ .+++++|||-||-.+-..|..+..
T Consensus 263 ~I~~~L~~lL~k~p~---~kliVTGHSLGGALAtLaAa~L~~ 301 (475)
T PLN02162 263 TIRQMLRDKLARNKN---LKYILTGHSLGGALAALFPAILAI 301 (475)
T ss_pred HHHHHHHHHHHhCCC---ceEEEEecChHHHHHHHHHHHHHH
Confidence 455667777788875 469999999999988877776654
No 150
>PLN02561 triosephosphate isomerase
Probab=62.53 E-value=21 Score=33.26 Aligned_cols=61 Identities=16% Similarity=0.218 Sum_probs=45.4
Q ss_pred hHHHHHHHHHHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 143 DAIAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
+.+.++++..++++++.+ |..-....+-|. |||-.-|.=+..|... .++.|+.||.+.+|+
T Consensus 178 s~~~~~~v~~~Ir~~l~~~~~~~~a~~i~IL---YGGSV~~~N~~~l~~~---~~iDG~LVG~ASL~~ 239 (253)
T PLN02561 178 TPAQAQEVHDELRKWLHKNVSPEVAATTRII---YGGSVTGANCKELAAQ---PDVDGFLVGGASLKP 239 (253)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EeCCcCHHHHHHHhcC---CCCCeEEEehHhhHH
Confidence 344567888899988753 432223345454 9999999999999875 569999999999986
No 151
>PLN02761 lipase class 3 family protein
Probab=62.09 E-value=18 Score=37.08 Aligned_cols=62 Identities=19% Similarity=0.161 Sum_probs=43.2
Q ss_pred HHHHHHHHHHHHHHHHCCCC-C--CCceEEEeeccccccHHHHHHHHHHhc--------cccccceEEEeCcc
Q 019704 145 IAARDNLAFLEGWYEKFPEY-K--NREFFITGESYAGHYVPQLAQLIIQSN--------MKLNLKGIAIGNPL 206 (337)
Q Consensus 145 ~~a~~~~~fl~~f~~~fp~~-~--~~~~~i~GeSYgG~yvp~~a~~i~~~n--------~~inLkGi~igng~ 206 (337)
.+.++++..++...+.+|.. + ...++|+|||.||-.+-..|..|...+ ..+++.-+..|.|-
T Consensus 269 SaR~qVl~eV~rL~~~Y~~~~k~e~~sItVTGHSLGGALAtLaA~DIa~~gln~~~~~~~~~PVtv~TFGsPR 341 (527)
T PLN02761 269 SAREQVLAEVKRLVEYYGTEEEGHEISITVTGHSLGASLALVSAYDIAELNLNHVPENNYKIPITVFSFSGPR 341 (527)
T ss_pred hHHHHHHHHHHHHHHhcccccCCCCceEEEeccchHHHHHHHHHHHHHHhccccccccccCCceEEEEcCCCC
Confidence 34577888899888888542 1 235999999999999999888886521 12445555555543
No 152
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=61.06 E-value=33 Score=31.07 Aligned_cols=62 Identities=18% Similarity=0.120 Sum_probs=35.1
Q ss_pred HHHHHHHHHHHHHHHHC--CCCCCCceEEEeeccccccHHHHHHHHHHhcc--ccccceEE-EeCcccCcc
Q 019704 145 IAARDNLAFLEGWYEKF--PEYKNREFFITGESYAGHYVPQLAQLIIQSNM--KLNLKGIA-IGNPLLEFN 210 (337)
Q Consensus 145 ~~a~~~~~fl~~f~~~f--p~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~--~inLkGi~-igng~~d~~ 210 (337)
..++.+.+.++...+.. ..-..+++.|+|||.||.- |+.++.... .-++++|+ ++.|...+.
T Consensus 61 ~q~~~~~~~i~~i~~~~~~~~~~~~~vilVgHSmGGlv----ar~~l~~~~~~~~~v~~iitl~tPh~g~~ 127 (225)
T PF07819_consen 61 RQAEFLAEAIKYILELYKSNRPPPRSVILVGHSMGGLV----ARSALSLPNYDPDSVKTIITLGTPHRGSP 127 (225)
T ss_pred HHHHHHHHHHHHHHHhhhhccCCCCceEEEEEchhhHH----HHHHHhccccccccEEEEEEEcCCCCCcc
Confidence 34455556666655554 2224678999999999963 333332211 13456655 566665544
No 153
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=59.95 E-value=17 Score=31.94 Aligned_cols=41 Identities=27% Similarity=0.365 Sum_probs=29.2
Q ss_pred HHHHHHHHHHHHHHHHHC-CCCCCCceEEEeeccccccHHHHHHH
Q 019704 144 AIAARDNLAFLEGWYEKF-PEYKNREFFITGESYAGHYVPQLAQL 187 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~f-p~~~~~~~~i~GeSYgG~yvp~~a~~ 187 (337)
+..|.+|..|++..-..+ | ...+-++|||||+.-+-.-+..
T Consensus 88 ~~ga~~L~~f~~gl~a~~~~---~~~~tv~GHSYGS~v~G~A~~~ 129 (177)
T PF06259_consen 88 RAGAPRLARFLDGLRATHGP---DAHLTVVGHSYGSTVVGLAAQQ 129 (177)
T ss_pred HHHHHHHHHHHHHhhhhcCC---CCCEEEEEecchhHHHHHHhhh
Confidence 345677777777766666 3 3469999999999876666555
No 154
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=59.25 E-value=9.8 Score=34.10 Aligned_cols=46 Identities=22% Similarity=0.273 Sum_probs=34.6
Q ss_pred HHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 155 EGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 155 ~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
-+|++.+|+...+++-|.|-|.||-.+-.+|...-+ ++.++..||.
T Consensus 10 i~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~~------i~avVa~~ps 55 (213)
T PF08840_consen 10 IDWLKSHPEVDPDKIGIIGISKGAELALLLASRFPQ------ISAVVAISPS 55 (213)
T ss_dssp HHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSSS------EEEEEEES--
T ss_pred HHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCCC------ccEEEEeCCc
Confidence 357889999988999999999999988888887753 6666666653
No 155
>KOG2984 consensus Predicted hydrolase [General function prediction only]
Probab=58.66 E-value=12 Score=33.93 Aligned_cols=88 Identities=22% Similarity=0.243 Sum_probs=54.8
Q ss_pred CEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCcc---CChHHHHHH
Q 019704 73 PLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGS---VNDAIAARD 149 (337)
Q Consensus 73 Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~---~~~~~~a~~ 149 (337)
--||.+.|--||+-.++ +|-. . +-..-.+ ..|+-+|.| |.|-|...+. ++.. ..|.+.|-|
T Consensus 43 ~~iLlipGalGs~~tDf------~pql------~-~l~k~l~-~TivawDPp-GYG~SrPP~R-kf~~~ff~~Da~~avd 106 (277)
T KOG2984|consen 43 NYILLIPGALGSYKTDF------PPQL------L-SLFKPLQ-VTIVAWDPP-GYGTSRPPER-KFEVQFFMKDAEYAVD 106 (277)
T ss_pred ceeEecccccccccccC------CHHH------H-hcCCCCc-eEEEEECCC-CCCCCCCCcc-cchHHHHHHhHHHHHH
Confidence 35777888888887753 2211 1 1111111 678999966 9998876432 2211 245666777
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHH
Q 019704 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQ 186 (337)
Q Consensus 150 ~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~ 186 (337)
++++|. -.+|-|.|-|=||.-+-..|.
T Consensus 107 LM~aLk----------~~~fsvlGWSdGgiTalivAa 133 (277)
T KOG2984|consen 107 LMEALK----------LEPFSVLGWSDGGITALIVAA 133 (277)
T ss_pred HHHHhC----------CCCeeEeeecCCCeEEEEeec
Confidence 777764 357999999999986544443
No 156
>COG0627 Predicted esterase [General function prediction only]
Probab=57.67 E-value=39 Score=32.49 Aligned_cols=125 Identities=18% Similarity=0.181 Sum_probs=66.4
Q ss_pred CCEEEEEcCCCChhhhhhhhcccCCCCCC--CCCc---cccccccchhhccccccccCcccccccccc-CCCCccCChHH
Q 019704 72 KPLVLWLNGGPGCSSIGAGAFCEHGPFKP--SGDT---LLRNEYSWNKEANMLYLESPAGVGFSYSAN-KSFYGSVNDAI 145 (337)
Q Consensus 72 ~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~--~~~~---~~~n~~sW~~~an~l~iDqP~g~GfSy~~~-~~~~~~~~~~~ 145 (337)
-||++|+ +|..|.- -.+.+.++.+- +... ..+.-.-+....++--|+ |+|.|.|+-.+ ........
T Consensus 54 ipV~~~l-~G~t~~~---~~~~~~~g~~~~a~~~g~~~~~p~t~~~~~~~~~~vv~-p~G~~~sfY~d~~~~~~~~~--- 125 (316)
T COG0627 54 IPVLYLL-SGLTCNE---PNVYLLDGLRRQADESGWAVVTPDTSPRGAGVNISVVM-PLGGGASFYSDWTQPPWASG--- 125 (316)
T ss_pred CCEEEEe-CCCCCCC---CceEeccchhhhhhhcCeEEecCCCCcccCCCCccccc-cCCCccceecccccCccccC---
Confidence 3555555 6777773 12334455542 1111 111123344455555555 68999996432 11100001
Q ss_pred HHHHHHHHH-----HHHHHHCCCCCC-CceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 146 AARDNLAFL-----EGWYEKFPEYKN-REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 146 ~a~~~~~fl-----~~f~~~fp~~~~-~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
..++..|| ..|.+.||.-++ ..--|+|+|.||+=+-.+|.+-.++ ++.++=-.|+++|.
T Consensus 126 -~~q~~tfl~~ELP~~~~~~f~~~~~~~~~aI~G~SMGG~GAl~lA~~~pd~-----f~~~sS~Sg~~~~s 190 (316)
T COG0627 126 -PYQWETFLTQELPALWEAAFPADGTGDGRAIAGHSMGGYGALKLALKHPDR-----FKSASSFSGILSPS 190 (316)
T ss_pred -ccchhHHHHhhhhHHHHHhcCcccccCCceeEEEeccchhhhhhhhhCcch-----hceecccccccccc
Confidence 12233333 356677774432 3688999999999777766555432 66666667777665
No 157
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=56.64 E-value=19 Score=33.36 Aligned_cols=68 Identities=24% Similarity=0.223 Sum_probs=37.9
Q ss_pred ccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHH
Q 019704 116 ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQL 187 (337)
Q Consensus 116 an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~ 187 (337)
..||-.|-. |.|=|.....+.....=-+=.-.|+-..|..--+.-| ..|.|.+||||||+-.-.++++
T Consensus 58 f~Vlt~dyR-G~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~---~~P~y~vgHS~GGqa~gL~~~~ 125 (281)
T COG4757 58 FEVLTFDYR-GIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALP---GHPLYFVGHSFGGQALGLLGQH 125 (281)
T ss_pred ceEEEEecc-cccCCCccccccCccchhhhhhcchHHHHHHHHhhCC---CCceEEeeccccceeecccccC
Confidence 457777766 8887765433221110011122444444443333334 6799999999999976555543
No 158
>PF07849 DUF1641: Protein of unknown function (DUF1641); InterPro: IPR012440 Archaeal and bacterial hypothetical proteins are found in this family, with the region in question being approximately 40 residues long.
Probab=55.65 E-value=5.2 Score=26.49 Aligned_cols=17 Identities=29% Similarity=0.292 Sum_probs=14.3
Q ss_pred hHhhccCcHHHHHHhcc
Q 019704 308 ETTKYLNRKDVQKALHA 324 (337)
Q Consensus 308 ~~~~YLN~~dVq~ALhV 324 (337)
.+-.-|++||||++|++
T Consensus 15 gl~~~l~DpdvqrgL~~ 31 (42)
T PF07849_consen 15 GLLRALRDPDVQRGLGF 31 (42)
T ss_pred HHHHHHcCHHHHHHHHH
Confidence 35677999999999986
No 159
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=55.36 E-value=36 Score=25.42 Aligned_cols=78 Identities=19% Similarity=0.146 Sum_probs=43.9
Q ss_pred ceEEEEEeeccCCCCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccC
Q 019704 56 RALFYYFVEAATEAASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANK 135 (337)
Q Consensus 56 ~~lfy~f~~s~~~~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~ 135 (337)
.+||+..++..+. .+.+|+.++|--..|.- +.-+ ... + +. +-.+|+-+|++ |-|.|-+..
T Consensus 2 ~~L~~~~w~p~~~--~k~~v~i~HG~~eh~~r-y~~~---a~~------L--~~----~G~~V~~~D~r-GhG~S~g~r- 61 (79)
T PF12146_consen 2 TKLFYRRWKPENP--PKAVVVIVHGFGEHSGR-YAHL---AEF------L--AE----QGYAVFAYDHR-GHGRSEGKR- 61 (79)
T ss_pred cEEEEEEecCCCC--CCEEEEEeCCcHHHHHH-HHHH---HHH------H--Hh----CCCEEEEECCC-cCCCCCCcc-
Confidence 4577654444322 67999999986444433 2222 111 1 11 23457789988 999996422
Q ss_pred CCCccCChHHHHHHHHHHHH
Q 019704 136 SFYGSVNDAIAARDNLAFLE 155 (337)
Q Consensus 136 ~~~~~~~~~~~a~~~~~fl~ 155 (337)
.+ ..+-+...+|+..|+|
T Consensus 62 -g~-~~~~~~~v~D~~~~~~ 79 (79)
T PF12146_consen 62 -GH-IDSFDDYVDDLHQFIQ 79 (79)
T ss_pred -cc-cCCHHHHHHHHHHHhC
Confidence 22 2344556677776653
No 160
>KOG1516 consensus Carboxylesterase and related proteins [General function prediction only]
Probab=54.22 E-value=46 Score=33.94 Aligned_cols=34 Identities=18% Similarity=0.235 Sum_probs=24.7
Q ss_pred HHHHHHHHHHCCCCCCCceEEEeeccccccHHHHH
Q 019704 151 LAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLA 185 (337)
Q Consensus 151 ~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a 185 (337)
++++++....|-. ..+++-|+|||.||..|-.+.
T Consensus 180 L~wv~~~I~~FGG-dp~~vTl~G~saGa~~v~~l~ 213 (545)
T KOG1516|consen 180 LRWVKDNIPSFGG-DPKNVTLFGHSAGAASVSLLT 213 (545)
T ss_pred HHHHHHHHHhcCC-CCCeEEEEeechhHHHHHHHh
Confidence 5677777777742 245799999999998775543
No 161
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=52.40 E-value=55 Score=30.25 Aligned_cols=75 Identities=17% Similarity=0.230 Sum_probs=47.3
Q ss_pred ccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcccc
Q 019704 116 ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKL 195 (337)
Q Consensus 116 an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~i 195 (337)
--++=|+-| |-|==+... . .++-+..|+.+...|+ |-+..+|+-++|+|+||+.+=.+|.++.+.- .
T Consensus 34 iel~avqlP-GR~~r~~ep--~--~~di~~Lad~la~el~------~~~~d~P~alfGHSmGa~lAfEvArrl~~~g--~ 100 (244)
T COG3208 34 IELLAVQLP-GRGDRFGEP--L--LTDIESLADELANELL------PPLLDAPFALFGHSMGAMLAFEVARRLERAG--L 100 (244)
T ss_pred hheeeecCC-CcccccCCc--c--cccHHHHHHHHHHHhc------cccCCCCeeecccchhHHHHHHHHHHHHHcC--C
Confidence 346777777 666333221 1 2234455555554443 2345789999999999999999999998743 2
Q ss_pred ccceEEEe
Q 019704 196 NLKGIAIG 203 (337)
Q Consensus 196 nLkGi~ig 203 (337)
-.+++.|-
T Consensus 101 ~p~~lfis 108 (244)
T COG3208 101 PPRALFIS 108 (244)
T ss_pred CcceEEEe
Confidence 25555543
No 162
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=51.78 E-value=45 Score=31.42 Aligned_cols=66 Identities=21% Similarity=0.178 Sum_probs=41.6
Q ss_pred HHHHHHHHHHHHHHHHHCCC--C-CCCceEEEeeccccccHHHHHHHHHH-hccccc--cceEEEeCcccCcc
Q 019704 144 AIAARDNLAFLEGWYEKFPE--Y-KNREFFITGESYAGHYVPQLAQLIIQ-SNMKLN--LKGIAIGNPLLEFN 210 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~fp~--~-~~~~~~i~GeSYgG~yvp~~a~~i~~-~n~~in--LkGi~igng~~d~~ 210 (337)
...|..+++.++.-.+..+. + .+.++.|+|.|=||+=. ..|..+.. .-.+++ |.|.+.|.+..|..
T Consensus 45 ~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa-~~AA~l~~~YApeL~~~l~Gaa~gg~~~dl~ 116 (290)
T PF03583_consen 45 RSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAA-LWAAELAPSYAPELNRDLVGAAAGGPPADLA 116 (290)
T ss_pred HhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHH-HHHHHHhHHhCcccccceeEEeccCCccCHH
Confidence 34455566555554444332 2 35689999999998743 33334432 233489 99999999877753
No 163
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=51.67 E-value=23 Score=30.62 Aligned_cols=38 Identities=8% Similarity=0.083 Sum_probs=26.7
Q ss_pred CCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
..+.+|+|||.|..-+-..+. .....+++|+++..|.-
T Consensus 54 ~~~~ilVaHSLGc~~~l~~l~----~~~~~~v~g~lLVAp~~ 91 (171)
T PF06821_consen 54 DEPTILVAHSLGCLTALRWLA----EQSQKKVAGALLVAPFD 91 (171)
T ss_dssp TTTEEEEEETHHHHHHHHHHH----HTCCSSEEEEEEES--S
T ss_pred CCCeEEEEeCHHHHHHHHHHh----hcccccccEEEEEcCCC
Confidence 457999999999965544443 23346899999999984
No 164
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=51.59 E-value=17 Score=32.47 Aligned_cols=76 Identities=20% Similarity=0.192 Sum_probs=48.2
Q ss_pred ccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcccccc
Q 019704 118 MLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNL 197 (337)
Q Consensus 118 ~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inL 197 (337)
.|-.|=. |||=|-+.-.++. .+.+.|...++.++ +++|+-. .+++.|-|+|+-.+-.+|.+.-+ .
T Consensus 63 tlRfNfR-gVG~S~G~fD~Gi---GE~~Da~aaldW~~---~~hp~s~--~~~l~GfSFGa~Ia~~la~r~~e------~ 127 (210)
T COG2945 63 TLRFNFR-GVGRSQGEFDNGI---GELEDAAAALDWLQ---ARHPDSA--SCWLAGFSFGAYIAMQLAMRRPE------I 127 (210)
T ss_pred EEeeccc-ccccccCcccCCc---chHHHHHHHHHHHH---hhCCCch--hhhhcccchHHHHHHHHHHhccc------c
Confidence 3444544 9999977644443 45445555565665 4788643 36999999999877777777654 3
Q ss_pred ceEEEeCcccC
Q 019704 198 KGIAIGNPLLE 208 (337)
Q Consensus 198 kGi~igng~~d 208 (337)
.+.+...+.++
T Consensus 128 ~~~is~~p~~~ 138 (210)
T COG2945 128 LVFISILPPIN 138 (210)
T ss_pred cceeeccCCCC
Confidence 34555555554
No 165
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=51.27 E-value=42 Score=31.31 Aligned_cols=104 Identities=16% Similarity=0.158 Sum_probs=61.7
Q ss_pred CEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHHHHHH
Q 019704 73 PLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLA 152 (337)
Q Consensus 73 Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~ 152 (337)
|.+++++++=|.-.....|-.+.+| ..-++-++.| |.|. .... ..+-++.|+...+
T Consensus 1 ~pLF~fhp~~G~~~~~~~L~~~l~~-----------------~~~v~~l~a~-g~~~----~~~~--~~~l~~~a~~yv~ 56 (257)
T COG3319 1 PPLFCFHPAGGSVLAYAPLAAALGP-----------------LLPVYGLQAP-GYGA----GEQP--FASLDDMAAAYVA 56 (257)
T ss_pred CCEEEEcCCCCcHHHHHHHHHHhcc-----------------CceeeccccC-cccc----cccc--cCCHHHHHHHHHH
Confidence 5688898766654321122222222 2335567777 4432 1111 2345556666666
Q ss_pred HHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccC
Q 019704 153 FLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLE 208 (337)
Q Consensus 153 fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d 208 (337)
.|+ +.-|+ -|.+|.|.|+||.-+=.+|.++..+-+. +.-++|.+....
T Consensus 57 ~Ir---~~QP~---GPy~L~G~S~GG~vA~evA~qL~~~G~~--Va~L~llD~~~~ 104 (257)
T COG3319 57 AIR---RVQPE---GPYVLLGWSLGGAVAFEVAAQLEAQGEE--VAFLGLLDAVPP 104 (257)
T ss_pred HHH---HhCCC---CCEEEEeeccccHHHHHHHHHHHhCCCe--EEEEEEeccCCC
Confidence 665 46663 4999999999999999999999886533 344555554443
No 166
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=50.92 E-value=22 Score=35.04 Aligned_cols=24 Identities=13% Similarity=0.195 Sum_probs=19.9
Q ss_pred CCceEEEeeccccccHHHHHHHHH
Q 019704 166 NREFFITGESYAGHYVPQLAQLII 189 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~i~ 189 (337)
++++.|+|||+||.++-.+-....
T Consensus 118 ~~kv~li~HSmGgl~~~~fl~~~~ 141 (389)
T PF02450_consen 118 GKKVVLIAHSMGGLVARYFLQWMP 141 (389)
T ss_pred CCcEEEEEeCCCchHHHHHHHhcc
Confidence 679999999999988777666663
No 167
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=50.61 E-value=15 Score=32.94 Aligned_cols=54 Identities=17% Similarity=0.156 Sum_probs=37.1
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+++..+|++ .|+-...+ ..|+|.|.||.-+-.+|.+-.+. +.+++..+|.+++.
T Consensus 100 ~el~p~i~~---~~~~~~~~-~~i~G~S~GG~~Al~~~l~~Pd~-----F~~~~~~S~~~~~~ 153 (251)
T PF00756_consen 100 EELIPYIEA---NYRTDPDR-RAIAGHSMGGYGALYLALRHPDL-----FGAVIAFSGALDPS 153 (251)
T ss_dssp THHHHHHHH---HSSEEECC-EEEEEETHHHHHHHHHHHHSTTT-----ESEEEEESEESETT
T ss_pred ccchhHHHH---hcccccce-eEEeccCCCcHHHHHHHHhCccc-----cccccccCcccccc
Confidence 344444443 45444333 89999999998777776654443 88899999988775
No 168
>PRK00042 tpiA triosephosphate isomerase; Provisional
Probab=50.58 E-value=52 Score=30.48 Aligned_cols=61 Identities=18% Similarity=0.294 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 143 DAIAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+.+.++++..|+++++.. |. -....+-|. |||-.-|.=+..+... -++.|+.||.+.+++.
T Consensus 178 s~~~~~~v~~~Ir~~l~~~~~-~~~~~~~Il---YGGSV~~~N~~~l~~~---~~vDG~LVG~Asl~~~ 239 (250)
T PRK00042 178 TPEQAQEVHAFIRAVLAELYG-EVAEKVRIL---YGGSVKPDNAAELMAQ---PDIDGALVGGASLKAE 239 (250)
T ss_pred CHHHHHHHHHHHHHHHHHhcc-cccCCceEE---EcCCCCHHHHHHHhcC---CCCCEEEEeeeeechH
Confidence 344567888999998863 33 112334444 9999999999999875 4699999999998764
No 169
>PRK07868 acyl-CoA synthetase; Validated
Probab=49.99 E-value=89 Score=34.75 Aligned_cols=40 Identities=18% Similarity=0.257 Sum_probs=28.4
Q ss_pred CCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
..+++++|+|.||..+-.+|.. ... -.++++++.+.-+|.
T Consensus 140 ~~~v~lvG~s~GG~~a~~~aa~--~~~--~~v~~lvl~~~~~d~ 179 (994)
T PRK07868 140 GRDVHLVGYSQGGMFCYQAAAY--RRS--KDIASIVTFGSPVDT 179 (994)
T ss_pred CCceEEEEEChhHHHHHHHHHh--cCC--CccceEEEEeccccc
Confidence 3579999999999988777653 111 237888877766654
No 170
>PRK14565 triosephosphate isomerase; Provisional
Probab=49.69 E-value=39 Score=31.08 Aligned_cols=54 Identities=15% Similarity=0.267 Sum_probs=41.1
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 143 DAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+.+.++++..+++++. .++-|. |||..-|.-+..+.+. -++.|+.||.+.+|+.
T Consensus 172 ~~e~i~~~~~~Ir~~~--------~~~~Il---YGGSV~~~N~~~l~~~---~~iDG~LvG~asl~~~ 225 (237)
T PRK14565 172 SNDAIAEAFEIIRSYD--------SKSHII---YGGSVNQENIRDLKSI---NQLSGVLVGSASLDVD 225 (237)
T ss_pred CHHHHHHHHHHHHHhC--------CCceEE---EcCccCHhhHHHHhcC---CCCCEEEEechhhcHH
Confidence 4445677888888762 233333 9999999999999874 4599999999999865
No 171
>cd00311 TIM Triosephosphate isomerase (TIM) is a glycolytic enzyme that catalyzes the interconversion of dihydroxyacetone phosphate and D-glyceraldehyde-3-phosphate. The reaction is very efficient and requires neither cofactors nor metal ions. TIM, usually homodimeric, but in some organisms tetrameric, is ubiqitous and conserved in function across eukaryotes, bacteria and archaea.
Probab=49.55 E-value=53 Score=30.30 Aligned_cols=60 Identities=20% Similarity=0.369 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 144 AIAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
.+.+.++..++++++.. +.+ ....+-|. |||-.-|.=+..+++.. ++.|+.||.+.+|+.
T Consensus 175 ~~~~~ev~~~ir~~l~~~~~~-~~~~~~Il---YGGSV~~~N~~~l~~~~---~vDG~LVG~Asl~~~ 235 (242)
T cd00311 175 PEQAQEVHAFIRKLLAELYGE-VAEKVRIL---YGGSVNPENAAELLAQP---DIDGVLVGGASLKAE 235 (242)
T ss_pred HHHHHHHHHHHHHHHHHhccc-ccCceeEE---ECCCCCHHHHHHHhcCC---CCCEEEeehHhhCHH
Confidence 34567888999998864 433 33445454 99999999999998753 499999999998753
No 172
>KOG2183 consensus Prolylcarboxypeptidase (angiotensinase C) [Posttranslational modification, protein turnover, chaperones; General function prediction only]
Probab=49.13 E-value=26 Score=35.04 Aligned_cols=92 Identities=21% Similarity=0.331 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCCChh-hh--hhhhcccCCCCCCCCCccccccccchhhcccccccc-------CccccccccccC-CCC
Q 019704 70 ASKPLVLWLNGGPGCS-SI--GAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLES-------PAGVGFSYSANK-SFY 138 (337)
Q Consensus 70 ~~~Pl~lwlnGGPG~S-s~--~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDq-------P~g~GfSy~~~~-~~~ 138 (337)
.+.|+.++. |-=|.= +. ..|++-|++|- ..|-|||+|. |.|.- ||.... -.|
T Consensus 79 g~gPIffYt-GNEGdie~Fa~ntGFm~D~Ap~---------------~~AllVFaEHRyYGeS~PFG~~-s~k~~~hlgy 141 (492)
T KOG2183|consen 79 GEGPIFFYT-GNEGDIEWFANNTGFMWDLAPE---------------LKALLVFAEHRYYGESLPFGSQ-SYKDARHLGY 141 (492)
T ss_pred CCCceEEEe-CCcccHHHHHhccchHHhhhHh---------------hCceEEEeehhccccCCCCcch-hccChhhhcc
Confidence 346877776 544421 11 23555555552 2455677764 55555 443211 122
Q ss_pred ccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccH
Q 019704 139 GSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYV 181 (337)
Q Consensus 139 ~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yv 181 (337)
-+.+++-.|+.+.|+ ++++-.-=+..|+..+|-||||+-.
T Consensus 142 --LtseQALADfA~ll~-~lK~~~~a~~~pvIafGGSYGGMLa 181 (492)
T KOG2183|consen 142 --LTSEQALADFAELLT-FLKRDLSAEASPVIAFGGSYGGMLA 181 (492)
T ss_pred --ccHHHHHHHHHHHHH-HHhhccccccCcEEEecCchhhHHH
Confidence 245555566665555 4444433345699999999999643
No 173
>PTZ00333 triosephosphate isomerase; Provisional
Probab=47.49 E-value=51 Score=30.68 Aligned_cols=61 Identities=18% Similarity=0.304 Sum_probs=44.8
Q ss_pred hHHHHHHHHHHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 143 DAIAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
+.+.++++..++++++.. |.......+-|. |||-.-|.=+..|... -++.|+.||.+.+|+
T Consensus 181 ~~e~i~~~~~~IR~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~---~~vDG~LvG~asl~~ 242 (255)
T PTZ00333 181 TPEQAQEVHAFIRKWLAEKVGADVAEATRII---YGGSVNEKNCKELIKQ---PDIDGFLVGGASLKP 242 (255)
T ss_pred CHHHHHHHHHHHHHHHHHhhcccccccceEE---EcCCCCHHHHHHHhcC---CCCCEEEEehHhhhh
Confidence 345668889999988753 432223334444 9999999999999875 469999999998873
No 174
>KOG3079 consensus Uridylate kinase/adenylate kinase [Nucleotide transport and metabolism]
Probab=47.09 E-value=11 Score=33.44 Aligned_cols=15 Identities=40% Similarity=1.004 Sum_probs=12.5
Q ss_pred CCCEEEEEcCCCChh
Q 019704 71 SKPLVLWLNGGPGCS 85 (337)
Q Consensus 71 ~~Pl~lwlnGGPG~S 85 (337)
..|-|+|+=|||||-
T Consensus 6 ~~~~IifVlGGPGsg 20 (195)
T KOG3079|consen 6 DKPPIIFVLGGPGSG 20 (195)
T ss_pred cCCCEEEEEcCCCCC
Confidence 557888888999976
No 175
>KOG3967 consensus Uncharacterized conserved protein [Function unknown]
Probab=46.72 E-value=88 Score=28.67 Aligned_cols=85 Identities=15% Similarity=0.262 Sum_probs=44.3
Q ss_pred cchhhccccccccCcccccccccc-CC-------------CCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeecc
Q 019704 111 SWNKEANMLYLESPAGVGFSYSAN-KS-------------FYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESY 176 (337)
Q Consensus 111 sW~~~an~l~iDqP~g~GfSy~~~-~~-------------~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSY 176 (337)
+...-+-+=||.+.+--||.-.-. .+ .| ..+..+.|..+|..+. .| -+...+|++-+||
T Consensus 127 ~Ld~GTQiPyi~rAv~~Gygviv~N~N~~~kfye~k~np~ky-irt~veh~~yvw~~~v-----~p-a~~~sv~vvahsy 199 (297)
T KOG3967|consen 127 DLDSGTQIPYIKRAVAEGYGVIVLNPNRERKFYEKKRNPQKY-IRTPVEHAKYVWKNIV-----LP-AKAESVFVVAHSY 199 (297)
T ss_pred ccccCCcChHHHHHHHcCCcEEEeCCchhhhhhhcccCcchh-ccchHHHHHHHHHHHh-----cc-cCcceEEEEEecc
Confidence 344445566788777777764321 11 11 1223334444443322 22 2345799999999
Q ss_pred ccccHHHHHHHHHHhccccccceEEEeCc
Q 019704 177 AGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (337)
Q Consensus 177 gG~yvp~~a~~i~~~n~~inLkGi~igng 205 (337)
||---..+..+.-..+ .+-.|++.+.
T Consensus 200 GG~~t~~l~~~f~~d~---~v~aialTDs 225 (297)
T KOG3967|consen 200 GGSLTLDLVERFPDDE---SVFAIALTDS 225 (297)
T ss_pred CChhHHHHHHhcCCcc---ceEEEEeecc
Confidence 9975555444443332 2445555543
No 176
>KOG3724 consensus Negative regulator of COPII vesicle formation [Intracellular trafficking, secretion, and vesicular transport]
Probab=46.40 E-value=31 Score=37.21 Aligned_cols=38 Identities=13% Similarity=0.050 Sum_probs=25.8
Q ss_pred HHHHHHHHHHHHHHHH---HCCCCC---CCceEEEeeccccccH
Q 019704 144 AIAARDNLAFLEGWYE---KFPEYK---NREFFITGESYAGHYV 181 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~---~fp~~~---~~~~~i~GeSYgG~yv 181 (337)
.++++.+.+++..-++ .-+||+ ...+.|+||||||..+
T Consensus 153 ~dQtEYV~dAIk~ILslYr~~~e~~~p~P~sVILVGHSMGGiVA 196 (973)
T KOG3724|consen 153 LDQTEYVNDAIKYILSLYRGEREYASPLPHSVILVGHSMGGIVA 196 (973)
T ss_pred HHHHHHHHHHHHHHHHHhhcccccCCCCCceEEEEeccchhHHH
Confidence 4556766666665444 445565 4469999999999753
No 177
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=45.14 E-value=49 Score=28.82 Aligned_cols=78 Identities=19% Similarity=0.267 Sum_probs=47.1
Q ss_pred ccccCccccc-cccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHH--HHHhccccc
Q 019704 120 YLESPAGVGF-SYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQL--IIQSNMKLN 196 (337)
Q Consensus 120 ~iDqP~g~Gf-Sy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~--i~~~n~~in 196 (337)
-|+-|+..+. +|. .+....+.++...++.+.++-| +.++.|+|-|=|++.+-..+.. +... ..=+
T Consensus 44 ~V~YpA~~~~~~y~--------~S~~~G~~~~~~~i~~~~~~CP---~~kivl~GYSQGA~V~~~~~~~~~l~~~-~~~~ 111 (179)
T PF01083_consen 44 GVEYPASLGPNSYG--------DSVAAGVANLVRLIEEYAARCP---NTKIVLAGYSQGAMVVGDALSGDGLPPD-VADR 111 (179)
T ss_dssp E--S---SCGGSCH--------HHHHHHHHHHHHHHHHHHHHST---TSEEEEEEETHHHHHHHHHHHHTTSSHH-HHHH
T ss_pred ecCCCCCCCccccc--------ccHHHHHHHHHHHHHHHHHhCC---CCCEEEEecccccHHHHHHHHhccCChh-hhhh
Confidence 3556666555 332 2334456778889999999999 4689999999999887777666 1100 0023
Q ss_pred cce-EEEeCcccCc
Q 019704 197 LKG-IAIGNPLLEF 209 (337)
Q Consensus 197 LkG-i~igng~~d~ 209 (337)
+.+ +.+|||.-.+
T Consensus 112 I~avvlfGdP~~~~ 125 (179)
T PF01083_consen 112 IAAVVLFGDPRRGA 125 (179)
T ss_dssp EEEEEEES-TTTBT
T ss_pred EEEEEEecCCcccC
Confidence 666 4678877643
No 178
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=42.92 E-value=59 Score=33.07 Aligned_cols=52 Identities=29% Similarity=0.484 Sum_probs=43.8
Q ss_pred HHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcccc
Q 019704 152 AFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNTD 212 (337)
Q Consensus 152 ~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~~ 212 (337)
..++.|+.+-|++ -|..|.|=||+=.-..|++.-+. ..||+.|.|.++...+
T Consensus 104 ~l~~~~Yg~~p~~----sY~~GcS~GGRqgl~~AQryP~d-----fDGIlAgaPA~~~~~~ 155 (474)
T PF07519_consen 104 ALIEAFYGKAPKY----SYFSGCSTGGRQGLMAAQRYPED-----FDGILAGAPAINWTHL 155 (474)
T ss_pred HHHHHHhCCCCCc----eEEEEeCCCcchHHHHHHhChhh-----cCeEEeCCchHHHHHH
Confidence 4567788877755 79999999999999999888876 9999999999886543
No 179
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=42.28 E-value=11 Score=36.99 Aligned_cols=57 Identities=26% Similarity=0.366 Sum_probs=35.5
Q ss_pred CCCCEEEEEcCCCC--hhhhhhhhcccCCCCCCC-------CCccccccccchhhccccccccCcccc
Q 019704 70 ASKPLVLWLNGGPG--CSSIGAGAFCEHGPFKPS-------GDTLLRNEYSWNKEANMLYLESPAGVG 128 (337)
Q Consensus 70 ~~~Pl~lwlnGGPG--~Ss~~~g~~~e~GP~~~~-------~~~~~~n~~sW~~~an~l~iDqP~g~G 128 (337)
++.|+=|=+.|.+| =||+ +..+-.+|+=..+ ..+....+|.--++.||.++|-| |+|
T Consensus 32 ~~~~l~IaV~G~sGsGKSSf-INalrGl~~~d~~aA~tGv~etT~~~~~Y~~p~~pnv~lWDlP-G~g 97 (376)
T PF05049_consen 32 DNAPLNIAVTGESGSGKSSF-INALRGLGHEDEGAAPTGVVETTMEPTPYPHPKFPNVTLWDLP-GIG 97 (376)
T ss_dssp HH--EEEEEEESTTSSHHHH-HHHHTT--TTSTTS--SSSHSCCTS-EEEE-SS-TTEEEEEE---GG
T ss_pred hcCceEEEEECCCCCCHHHH-HHHHhCCCCCCcCcCCCCCCcCCCCCeeCCCCCCCCCeEEeCC-CCC
Confidence 35688888888555 5788 8888888875421 12456778888899999999999 887
No 180
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=41.92 E-value=21 Score=35.86 Aligned_cols=52 Identities=13% Similarity=0.070 Sum_probs=31.1
Q ss_pred HHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCc
Q 019704 150 NLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (337)
Q Consensus 150 ~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng 205 (337)
.++++++....|--= .+++-|+|||-||.-|-.+... ...+--++..++-+|
T Consensus 192 AL~WV~~nI~~FGGD-p~~VTl~G~SAGa~sv~~~l~s---p~~~~LF~raI~~SG 243 (535)
T PF00135_consen 192 ALKWVQDNIAAFGGD-PDNVTLFGQSAGAASVSLLLLS---PSSKGLFHRAILQSG 243 (535)
T ss_dssp HHHHHHHHGGGGTEE-EEEEEEEEETHHHHHHHHHHHG---GGGTTSBSEEEEES-
T ss_pred HHHHHHhhhhhcccC-Ccceeeeeecccccccceeeec---ccccccccccccccc
Confidence 356666666656322 2369999999999755443333 222333777777777
No 181
>KOG2382 consensus Predicted alpha/beta hydrolase [General function prediction only]
Probab=41.86 E-value=42 Score=32.22 Aligned_cols=61 Identities=18% Similarity=0.173 Sum_probs=38.4
Q ss_pred cccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHH
Q 019704 117 NMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQL 187 (337)
Q Consensus 117 n~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~ 187 (337)
.+.-||.. --|.|--.. ..+-+..|+|+..|+..+-. .++..+..|.|||.|| -.-+++..
T Consensus 82 ~v~~vd~R-nHG~Sp~~~-----~h~~~~ma~dv~~Fi~~v~~---~~~~~~~~l~GHsmGG-~~~~m~~t 142 (315)
T KOG2382|consen 82 DVYAVDVR-NHGSSPKIT-----VHNYEAMAEDVKLFIDGVGG---STRLDPVVLLGHSMGG-VKVAMAET 142 (315)
T ss_pred ceEEEecc-cCCCCcccc-----ccCHHHHHHHHHHHHHHccc---ccccCCceecccCcch-HHHHHHHH
Confidence 45566766 677773221 23456677888888776432 2345689999999999 33333333
No 182
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=41.45 E-value=1.4e+02 Score=30.05 Aligned_cols=88 Identities=22% Similarity=0.243 Sum_probs=55.4
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCCCCccCChHHHHH
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAAR 148 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~ 148 (337)
..++|+||...| +++.. .|.+ .+-+=.=.+|.|+|+.. =-|=|.... .+++.-+-.++|.
T Consensus 60 ~~drPtV~~T~G--------Y~~~~--~p~r--------~Ept~Lld~NQl~vEhR-fF~~SrP~p-~DW~~Lti~QAA~ 119 (448)
T PF05576_consen 60 DFDRPTVLYTEG--------YNVST--SPRR--------SEPTQLLDGNQLSVEHR-FFGPSRPEP-ADWSYLTIWQAAS 119 (448)
T ss_pred CCCCCeEEEecC--------ccccc--Cccc--------cchhHhhccceEEEEEe-eccCCCCCC-CCcccccHhHhhH
Confidence 356799999976 23221 2322 22233345788888865 222233222 2333345678899
Q ss_pred HHHHHHHHHHHHCCCCCCCceEEEeecccccc
Q 019704 149 DNLAFLEGWYEKFPEYKNREFFITGESYAGHY 180 (337)
Q Consensus 149 ~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~y 180 (337)
|..+..+.|-..+| .++.-+|-|=||+-
T Consensus 120 D~Hri~~A~K~iY~----~kWISTG~SKGGmT 147 (448)
T PF05576_consen 120 DQHRIVQAFKPIYP----GKWISTGGSKGGMT 147 (448)
T ss_pred HHHHHHHHHHhhcc----CCceecCcCCCcee
Confidence 99999999877675 46999999999974
No 183
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=40.24 E-value=20 Score=35.25 Aligned_cols=38 Identities=18% Similarity=0.169 Sum_probs=22.2
Q ss_pred ceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCccc
Q 019704 168 EFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFNT 211 (337)
Q Consensus 168 ~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~~ 211 (337)
++-++||||||--+- ..+.+. ..+|..++.+||.-|..
T Consensus 229 ~i~~~GHSFGGATa~---~~l~~d---~r~~~~I~LD~W~~Pl~ 266 (379)
T PF03403_consen 229 RIGLAGHSFGGATAL---QALRQD---TRFKAGILLDPWMFPLG 266 (379)
T ss_dssp EEEEEEETHHHHHHH---HHHHH----TT--EEEEES---TTS-
T ss_pred heeeeecCchHHHHH---HHHhhc---cCcceEEEeCCcccCCC
Confidence 699999999995443 333332 34888899999987753
No 184
>PF00121 TIM: Triosephosphate isomerase; InterPro: IPR000652 Triosephosphate isomerase (5.3.1.1 from EC) (TIM) [] is the glycolytic enzyme that catalyses the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. TIM plays an important role in several metabolic pathways and is essential for efficient energy production. It is present in eukaryotes as well as in prokaryotes. TIM is a dimer of identical subunits, each of which is made up of about 250 amino-acid residues. A glutamic acid residue is involved in the catalytic mechanism [, ]. The tertiary structure of TIM has eight beta/alpha motifs folded into a barrel structure. The TIM barrel fold occurs ubiquitously and is found in numerous other enzymes that can be involved in energy metabolism, macromolecule metabolism, or small molecule metabolism []. The sequence around the active site residue is perfectly conserved in all known TIM's. Deficiencies in TIM are associated with haemolytic anaemia coupled with a progressive, severe neurological disorder [].; GO: 0004807 triose-phosphate isomerase activity, 0008152 metabolic process; PDB: 2YPI_A 1YPI_A 1NEY_B 1NF0_B 1I45_A 7TIM_A 3YPI_B 2H6R_H 2Y63_A 1N55_A ....
Probab=40.12 E-value=16 Score=33.77 Aligned_cols=62 Identities=18% Similarity=0.321 Sum_probs=43.1
Q ss_pred hHHHHHHHHHHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 143 DAIAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+.+.++.+..++++++.. |.+-..+++-|. |||-.-|.=+..+... -++.|+.||.+.+++.
T Consensus 176 s~~~~~~~~~~Ir~~l~~~~~~~~~~~~~IL---YGGSV~~~N~~~l~~~---~~iDG~LVG~asl~~~ 238 (244)
T PF00121_consen 176 SPEQIQEVHAFIREILAELYGEEVANNIRIL---YGGSVNPENAAELLSQ---PDIDGVLVGGASLKAE 238 (244)
T ss_dssp CHHHHHHHHHHHHHHHHHHTHHHHHHHSEEE---EESSESTTTHHHHHTS---TT-SEEEESGGGGSTH
T ss_pred CHHHHHHHHHHHHHHHHHhccccccCceeEE---ECCcCCcccHHHHhcC---CCCCEEEEchhhhccc
Confidence 345678889999998743 322122334444 8898888888888765 4699999999998875
No 185
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=39.95 E-value=38 Score=29.81 Aligned_cols=36 Identities=17% Similarity=0.210 Sum_probs=28.5
Q ss_pred CCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
.+|.||++||-|+.-+...+.++.. .++|+.+..|.
T Consensus 58 ~~~~vlVAHSLGc~~v~h~~~~~~~-----~V~GalLVApp 93 (181)
T COG3545 58 EGPVVLVAHSLGCATVAHWAEHIQR-----QVAGALLVAPP 93 (181)
T ss_pred CCCeEEEEecccHHHHHHHHHhhhh-----ccceEEEecCC
Confidence 5689999999999666666666654 49999998875
No 186
>PRK13962 bifunctional phosphoglycerate kinase/triosephosphate isomerase; Provisional
Probab=39.84 E-value=59 Score=34.43 Aligned_cols=62 Identities=19% Similarity=0.268 Sum_probs=46.3
Q ss_pred hHHHHHHHHHHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 143 DAIAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
+.+.|+++..++++++.. |-+-....+=|. |||---|.-+..|... -++.|+.||...+|+.
T Consensus 573 t~e~aqevh~~IR~~l~~~~~~~~a~~~rIl---YGGSV~~~N~~~l~~~---~diDG~LVGgASL~~~ 635 (645)
T PRK13962 573 TPEQAQEVHAFIRKLVAELYGEEAARKVRIL---YGGSVKSENAAGLFNQ---PDIDGGLVGGASLKAQ 635 (645)
T ss_pred CHHHHHHHHHHHHHHHHHHhChhhhccceEE---ecCCCCHhHHHHHhcC---CCCCeEEeehHhcCHH
Confidence 355678899999999863 422212233333 9999999999999876 4599999999988874
No 187
>KOG2931 consensus Differentiation-related gene 1 protein (NDR1 protein), related proteins [Function unknown]
Probab=39.68 E-value=1.6e+02 Score=28.25 Aligned_cols=94 Identities=11% Similarity=-0.002 Sum_probs=55.7
Q ss_pred cchhhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHH
Q 019704 111 SWNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 111 sW~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 190 (337)
+..+++-+.=||.| |--.--..-..+|...+-++.|+++...|+.| .+ +-+.=+|+--|......+|..-.+
T Consensus 74 ei~~~fcv~HV~~P-Gqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f-----~l--k~vIg~GvGAGAyIL~rFAl~hp~ 145 (326)
T KOG2931|consen 74 EILEHFCVYHVDAP-GQEDGAPSFPEGYPYPSMDDLADMLPEVLDHF-----GL--KSVIGMGVGAGAYILARFALNHPE 145 (326)
T ss_pred HHHhheEEEecCCC-ccccCCccCCCCCCCCCHHHHHHHHHHHHHhc-----Cc--ceEEEecccccHHHHHHHHhcChh
Confidence 45556778889988 43322111122322234556677777777643 33 358888988877777777765554
Q ss_pred hccccccceEEEeCcccCcccccchhhhHhh
Q 019704 191 SNMKLNLKGIAIGNPLLEFNTDFNSRAEFLW 221 (337)
Q Consensus 191 ~n~~inLkGi~igng~~d~~~~~~~~~~~~~ 221 (337)
+ +-|+++.|..- ..+++.++++
T Consensus 146 r-----V~GLvLIn~~~----~a~gwiew~~ 167 (326)
T KOG2931|consen 146 R-----VLGLVLINCDP----CAKGWIEWAY 167 (326)
T ss_pred h-----eeEEEEEecCC----CCchHHHHHH
Confidence 4 78999988542 2234555554
No 188
>KOG2369 consensus Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase [Lipid transport and metabolism]
Probab=39.41 E-value=28 Score=35.12 Aligned_cols=45 Identities=16% Similarity=0.211 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHHCCCCCC-CceEEEeeccccccHHHHHHHHHH
Q 019704 146 AARDNLAFLEGWYEKFPEYKN-REFFITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 146 ~a~~~~~fl~~f~~~fp~~~~-~~~~i~GeSYgG~yvp~~a~~i~~ 190 (337)
..++.+.-|+..++..-+..+ +|+.|++||.||.|+-++-...-.
T Consensus 160 ~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~~~ 205 (473)
T KOG2369|consen 160 ERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWVEA 205 (473)
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcccc
Confidence 334455555555544333334 899999999999998777655543
No 189
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=39.17 E-value=47 Score=29.52 Aligned_cols=59 Identities=14% Similarity=0.068 Sum_probs=34.8
Q ss_pred HHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc---ccccceEEEeCcccCcc
Q 019704 148 RDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM---KLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 148 ~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~---~inLkGi~igng~~d~~ 210 (337)
++.++.|.++++...-| .=|.|-|=|+..+..++....+... ...+|-+++.+|+.-+.
T Consensus 87 ~~sl~~l~~~i~~~GPf----dGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~~ 148 (212)
T PF03959_consen 87 DESLDYLRDYIEENGPF----DGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPPD 148 (212)
T ss_dssp HHHHHHHHHHHHHH-------SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----EE
T ss_pred HHHHHHHHHHHHhcCCe----EEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCCc
Confidence 45566666666654322 3499999999998888877766442 36789888888886543
No 190
>PRK10299 PhoPQ regulatory protein; Provisional
Probab=39.17 E-value=21 Score=24.11 Aligned_cols=28 Identities=14% Similarity=0.355 Sum_probs=17.5
Q ss_pred CchhHHHHHHHHHHHHHH---hhhccCCCCC
Q 019704 1 MGLKQWIIIVSALFCTTI---LTAKSVPQAD 28 (337)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~---~~~~~~~~~~ 28 (337)
|+.+||+.+++++++|+. .+....|+++
T Consensus 1 ~kk~rwiili~iv~~Cl~lyl~ald~~CDQg 31 (47)
T PRK10299 1 MKKFRWVVLVVVVLACLLLWAQVFNMMCDQD 31 (47)
T ss_pred CceeeehHHHHHHHHHHHHHHHHHHHHhcCC
Confidence 678899877666666554 3444555553
No 191
>KOG2565 consensus Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=38.74 E-value=37 Score=33.54 Aligned_cols=77 Identities=22% Similarity=0.336 Sum_probs=48.9
Q ss_pred cccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccc
Q 019704 117 NMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLN 196 (337)
Q Consensus 117 n~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~in 196 (337)
+|+-=--| |-|||-..++.++ |..++|+-+...+- ++.-+++||=|--||......+|...-+.
T Consensus 190 EVI~PSlP-GygwSd~~sk~GF---n~~a~ArvmrkLMl-------RLg~nkffiqGgDwGSiI~snlasLyPen----- 253 (469)
T KOG2565|consen 190 EVIAPSLP-GYGWSDAPSKTGF---NAAATARVMRKLML-------RLGYNKFFIQGGDWGSIIGSNLASLYPEN----- 253 (469)
T ss_pred EEeccCCC-CcccCcCCccCCc---cHHHHHHHHHHHHH-------HhCcceeEeecCchHHHHHHHHHhhcchh-----
Confidence 34433335 8888876655444 67777776665443 34456899998888888888777766553
Q ss_pred cceEEEeCcccCc
Q 019704 197 LKGIAIGNPLLEF 209 (337)
Q Consensus 197 LkGi~igng~~d~ 209 (337)
+.|+-+-+....+
T Consensus 254 V~GlHlnm~~~~s 266 (469)
T KOG2565|consen 254 VLGLHLNMCFVNS 266 (469)
T ss_pred hhHhhhcccccCC
Confidence 5555555544443
No 192
>PF00681 Plectin: Plectin repeat; InterPro: IPR001101 Plectin may have a role in cross-linking intermediate filaments, in inter-linking intermediate filaments with microtubules and microfilaments and in anchoring intermediate filaments to the plasma and nuclear membranes. Plectin is recruited into hemidesmosomes, multiprotein complexes that facilitate adhesion of epithelia to the basement membrane, thereby providing linkage between the intracellular keratin filaments to the laminins of the extracellular matrix. Plectin binds to hemidesmosomes through association of its actin-binding domain with the first pair of fibronectin type III repeats and a small part of the connecting segment of the integrin-beta4 subunit, the latter (integrin-alpha6,beta4) acting as a receptor for the extracellular matrix component laminin-5. The plectin repeat is also seen in the cell adhesion junction plaque proteins, desmoplakin, envoplakin, and bullous pemphigoid antigen. The domains in plakins show considerable sequence homology. The N terminus consists of a plakin domain containing a number of subdomains with high alpha-helical content, while the central coiled-coil domain is composed of heptad repeats involved in the dimerisation of plakin, and the C terminus contains one or more homologous repeat sequences referred to plectin repeats []. This entry represents the plectin repeats found in the C terminus of plakin proteins.; GO: 0005856 cytoskeleton; PDB: 1LM7_A 1LM5_A.
Probab=38.04 E-value=21 Score=23.67 Aligned_cols=33 Identities=18% Similarity=0.152 Sum_probs=23.3
Q ss_pred CcccCcccccchhhhHhhhcCCCCchhhhHHHh
Q 019704 204 NPLLEFNTDFNSRAEFLWSHGLISDSTYDIFTR 236 (337)
Q Consensus 204 ng~~d~~~~~~~~~~~~~~~gli~~~~~~~~~~ 236 (337)
.|.+||.+...--.+=|+..|+|+.+++..+.+
T Consensus 11 gGiidp~tg~~lsv~~A~~~glId~~~~~~L~e 43 (45)
T PF00681_consen 11 GGIIDPETGERLSVEEAIQRGLIDSDTAQKLLE 43 (45)
T ss_dssp TSEEETTTTEEEEHHHHHHTTSS-HHHHHHHHH
T ss_pred eeEEeCCCCeEEcHHHHHHCCCcCHHHHHHHHc
Confidence 477788776554456688899999998877653
No 193
>KOG2541 consensus Palmitoyl protein thioesterase [Lipid transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=36.44 E-value=75 Score=29.98 Aligned_cols=93 Identities=18% Similarity=0.278 Sum_probs=50.8
Q ss_pred CCCCCEEEEEcCCCChhhhhhhhcccCCCCCCCCCccccccccchhhccccccccCccccccccccCC--CCccCChHHH
Q 019704 69 AASKPLVLWLNGGPGCSSIGAGAFCEHGPFKPSGDTLLRNEYSWNKEANMLYLESPAGVGFSYSANKS--FYGSVNDAIA 146 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~Ss~~~g~~~e~GP~~~~~~~~~~n~~sW~~~an~l~iDqP~g~GfSy~~~~~--~~~~~~~~~~ 146 (337)
++..|+|+|=-=|-.|||..++.|.| +..| -|-..||+-.-... +....+..++
T Consensus 21 ~s~~P~ii~HGigd~c~~~~~~~~~q----------~l~~--------------~~g~~v~~leig~g~~~s~l~pl~~Q 76 (296)
T KOG2541|consen 21 PSPVPVIVWHGIGDSCSSLSMANLTQ----------LLEE--------------LPGSPVYCLEIGDGIKDSSLMPLWEQ 76 (296)
T ss_pred cccCCEEEEeccCcccccchHHHHHH----------HHHh--------------CCCCeeEEEEecCCcchhhhccHHHH
Confidence 44489999864488999854454432 1111 13344444321111 1102234445
Q ss_pred HHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHH
Q 019704 147 ARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQ 190 (337)
Q Consensus 147 a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~ 190 (337)
++.+.+.+. .-|++ ++-++|+|.|=||..+=++++..-+
T Consensus 77 v~~~ce~v~----~m~~l-sqGynivg~SQGglv~Raliq~cd~ 115 (296)
T KOG2541|consen 77 VDVACEKVK----QMPEL-SQGYNIVGYSQGGLVARALIQFCDN 115 (296)
T ss_pred HHHHHHHHh----cchhc-cCceEEEEEccccHHHHHHHHhCCC
Confidence 455555544 34555 4579999999999766555555543
No 194
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=36.36 E-value=94 Score=28.87 Aligned_cols=58 Identities=19% Similarity=0.225 Sum_probs=31.8
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhcc--cc-ccce-EEEeCcc
Q 019704 143 DAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNM--KL-NLKG-IAIGNPL 206 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~--~i-nLkG-i~igng~ 206 (337)
....|+-+...|+..-+ +|.=+.+-++|||+||.-+ ..++.+... .+ .|+= |.|+.|+
T Consensus 82 ~~~qa~wl~~vl~~L~~---~Y~~~~~N~VGHSmGg~~~---~~yl~~~~~~~~~P~l~K~V~Ia~pf 143 (255)
T PF06028_consen 82 YKKQAKWLKKVLKYLKK---KYHFKKFNLVGHSMGGLSW---TYYLENYGNDKNLPKLNKLVTIAGPF 143 (255)
T ss_dssp HHHHHHHHHHHHHHHHH---CC--SEEEEEEETHHHHHH---HHHHHHCTTGTTS-EEEEEEEES--T
T ss_pred HHHHHHHHHHHHHHHHH---hcCCCEEeEEEECccHHHH---HHHHHHhccCCCCcccceEEEecccc
Confidence 34555656555555444 4444689999999999644 455555322 23 5544 4455443
No 195
>KOG1553 consensus Predicted alpha/beta hydrolase BAT5 [General function prediction only]
Probab=35.58 E-value=87 Score=30.77 Aligned_cols=56 Identities=20% Similarity=0.240 Sum_probs=38.0
Q ss_pred CChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 141 VNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 141 ~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
.|+..+++.+.+|-.+ .=.|+..++.|.|-|-||.-+...|.-- -++|++++-.-+
T Consensus 289 ~n~~nA~DaVvQfAI~----~Lgf~~edIilygWSIGGF~~~waAs~Y------PdVkavvLDAtF 344 (517)
T KOG1553|consen 289 VNTLNAADAVVQFAIQ----VLGFRQEDIILYGWSIGGFPVAWAASNY------PDVKAVVLDATF 344 (517)
T ss_pred ccchHHHHHHHHHHHH----HcCCCccceEEEEeecCCchHHHHhhcC------CCceEEEeecch
Confidence 4666665555554432 2266688999999999999887777543 458988765433
No 196
>PF04446 Thg1: tRNAHis guanylyltransferase; InterPro: IPR007537 The Thg1 protein from Saccharomyces cerevisiae (Baker's yeast) is responsible for adding a GMP residue to the 5' end of tRNA His [].; PDB: 3OTE_A 3OTC_A 3OTD_A 3OTB_A.
Probab=35.29 E-value=44 Score=28.00 Aligned_cols=51 Identities=20% Similarity=0.295 Sum_probs=33.6
Q ss_pred ccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeec
Q 019704 118 MLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGES 175 (337)
Q Consensus 118 ~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeS 175 (337)
||-|| |.||+.-+..-.+..-+|+...+.|.+.-+..++.|+ ..++..|+|
T Consensus 23 vvRiD---G~~F~kft~~~~f~KP~D~r~~~~M~~aa~~l~~~~~----~~~~aY~~S 73 (135)
T PF04446_consen 23 VVRID---GRGFHKFTKRHGFEKPNDERFLKAMNEAAKALMEEFP----DIVLAYGQS 73 (135)
T ss_dssp EEEEE---ETTHHHHHHHTT--SS--HHHHHHHHHHHHHHHHHSS----SEEEEEEET
T ss_pred EEEEe---CcchhhhcccCCCCCCCCHHHHHHHHHHHHHHHHhCC----CcEEEEEcC
Confidence 68899 9999954333223334788888888888888888886 256666665
No 197
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=34.33 E-value=42 Score=31.42 Aligned_cols=54 Identities=19% Similarity=0.225 Sum_probs=29.3
Q ss_pred HHHHHHHHH----HHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCccc
Q 019704 148 RDNLAFLEG----WYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLL 207 (337)
Q Consensus 148 ~~~~~fl~~----f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~ 207 (337)
+.+.+||.+ |.+. .+ ....+--|+|||+||-.+- ..++++.+. +.-+++++|-+
T Consensus 114 ~~f~~fL~~~lkP~Ie~~y~-~~~~~~~i~GhSlGGLfvl---~aLL~~p~~--F~~y~~~SPSl 172 (264)
T COG2819 114 DAFREFLTEQLKPFIEARYR-TNSERTAIIGHSLGGLFVL---FALLTYPDC--FGRYGLISPSL 172 (264)
T ss_pred HHHHHHHHHhhHHHHhcccc-cCcccceeeeecchhHHHH---HHHhcCcch--hceeeeecchh
Confidence 445555544 4443 32 2344589999999997653 334443222 34455555543
No 198
>PF07172 GRP: Glycine rich protein family; InterPro: IPR010800 This family consists of glycine rich proteins. Some of them may be involved in resistance to environmental stress [].
Probab=33.79 E-value=40 Score=26.44 Aligned_cols=9 Identities=22% Similarity=0.656 Sum_probs=5.2
Q ss_pred CchhHHHHH
Q 019704 1 MGLKQWIII 9 (337)
Q Consensus 1 ~~~~~~~~~ 9 (337)
|..|.+|.+
T Consensus 1 MaSK~~llL 9 (95)
T PF07172_consen 1 MASKAFLLL 9 (95)
T ss_pred CchhHHHHH
Confidence 676665543
No 199
>PF11466 Doppel: Prion-like protein Doppel; InterPro: IPR021566 Dpl is a homologue related to the prion protein (PrP). Dpl is toxic to neurons and is expressed in the brains of mice that do not express PrP. In DHPC and SDS micelles, Dpl shoes about 40% alpha-helical structure however in aqueous solution it consists of a random coil. The alpha helical segment can adopt a transmembrane localisation also in a membrane. The unprocessed Dpl protein is thought to posses a possible channel formation mechanism which may be related to toxicity through direct interaction with cell membranes and damage to the cell membrane. ; PDB: 1Z65_A.
Probab=32.71 E-value=43 Score=20.42 Aligned_cols=19 Identities=26% Similarity=0.599 Sum_probs=12.7
Q ss_pred HHHHHHHHHHHHHHhhhcc
Q 019704 5 QWIIIVSALFCTTILTAKS 23 (337)
Q Consensus 5 ~~~~~~~~~~~~~~~~~~~ 23 (337)
-|+.|+++++++-+++..+
T Consensus 8 ~~lAi~c~LL~s~Ls~VkA 26 (30)
T PF11466_consen 8 WWLAIVCVLLFSHLSSVKA 26 (30)
T ss_dssp HHHHHHHHHHHHHTTTT--
T ss_pred HHHHHHHHHHHHHhhHHHh
Confidence 4688888888877755544
No 200
>PF15613 WHIM2: WSTF, HB1, Itc1p, MBD9 motif 2
Probab=31.47 E-value=93 Score=20.12 Aligned_cols=27 Identities=11% Similarity=0.236 Sum_probs=12.5
Q ss_pred ceEEEEEeeccCC-CCCCCEEEEEcCCCC
Q 019704 56 RALFYYFVEAATE-AASKPLVLWLNGGPG 83 (337)
Q Consensus 56 ~~lfy~f~~s~~~-~~~~Pl~lwlnGGPG 83 (337)
.+-+|||..+... +....-++|. +||+
T Consensus 11 ~NrYwwf~~s~~~~~~~~~~~~v~-~~~~ 38 (38)
T PF15613_consen 11 GNRYWWFSSSSSNSQYYNGGRFVE-QGPD 38 (38)
T ss_pred CceEEEEecccccCCCCCceEEEE-eCCC
Confidence 3456667444333 2333444444 5554
No 201
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=31.41 E-value=61 Score=28.41 Aligned_cols=36 Identities=17% Similarity=0.286 Sum_probs=28.1
Q ss_pred CCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEe
Q 019704 163 EYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (337)
Q Consensus 163 ~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ig 203 (337)
....-|+.|-|.||||.....+|..+... +.|+...
T Consensus 85 ~l~~gpLi~GGkSmGGR~aSmvade~~A~-----i~~L~cl 120 (213)
T COG3571 85 GLAEGPLIIGGKSMGGRVASMVADELQAP-----IDGLVCL 120 (213)
T ss_pred cccCCceeeccccccchHHHHHHHhhcCC-----cceEEEe
Confidence 45566899999999999999999888643 5666543
No 202
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=31.18 E-value=55 Score=34.34 Aligned_cols=22 Identities=9% Similarity=0.193 Sum_probs=18.3
Q ss_pred CCceEEEeeccccccHHHHHHH
Q 019704 166 NREFFITGESYAGHYVPQLAQL 187 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~ 187 (337)
++++.|+|||+||.++=++-+.
T Consensus 212 gkKVVLV~HSMGglv~lyFL~w 233 (642)
T PLN02517 212 GKKVVVVPHSMGVLYFLHFMKW 233 (642)
T ss_pred CCeEEEEEeCCchHHHHHHHHh
Confidence 5799999999999887776554
No 203
>PF09292 Neil1-DNA_bind: Endonuclease VIII-like 1, DNA bind; InterPro: IPR015371 This domain is predominantly found in Endonuclease VIII-like 1 proteins and adopts a glucocorticoid receptor-like fold. Structural analysis reveals a zincless finger motif that is required for glycosylase activity []. ; PDB: 1TDH_A.
Probab=29.96 E-value=31 Score=22.21 Aligned_cols=13 Identities=31% Similarity=0.958 Sum_probs=6.8
Q ss_pred CCCEEEEEcCCCC
Q 019704 71 SKPLVLWLNGGPG 83 (337)
Q Consensus 71 ~~Pl~lwlnGGPG 83 (337)
..--.||++|-||
T Consensus 23 ~~gRTiWFqGdPG 35 (39)
T PF09292_consen 23 RNGRTIWFQGDPG 35 (39)
T ss_dssp TTS-EEEESS---
T ss_pred cCCCEEEeeCCCC
Confidence 3455799999887
No 204
>PRK15492 triosephosphate isomerase; Provisional
Probab=29.51 E-value=1.4e+02 Score=27.94 Aligned_cols=60 Identities=17% Similarity=0.233 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHHHH-HCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 144 AIAARDNLAFLEGWYE-KFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 144 ~~~a~~~~~fl~~f~~-~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
.+.+++...++++++. .+-+- ...+-|. |||-.-|.-+..|... -++.|+.||..-+|+.
T Consensus 188 ~e~~~~~~~~Ir~~l~~~~~~~-~~~irIL---YGGSV~~~N~~~l~~~---~diDG~LvG~aSl~~~ 248 (260)
T PRK15492 188 ADYADEKHAVIKQCLIELFGDA-GDDIPVF---YGGSVNAENANELFGQ---PHIDGLFIGRSAWDAD 248 (260)
T ss_pred HHHHHHHHHHHHHHHHHHhccc-cCceeEE---EcCccCHHHHHHHhcC---CCCCEEEeehhhcCHH
Confidence 4456778889998864 34322 2345555 9999999999999876 3599999999988874
No 205
>TIGR00419 tim triosephosphate isomerase. Triosephosphate isomerase (tim/TPIA) is the glycolytic enzyme that catalyzes the reversible interconversion of glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. The active site of the enzyme is located between residues 240-258 of the model ([AV]-Y-E-P-[LIVM]-W-[SA]-I-G-T-[GK]) with E being the active site residue. There is a slight deviation from this sequence within the archeal members of this family.
Probab=29.38 E-value=1.3e+02 Score=26.97 Aligned_cols=54 Identities=7% Similarity=0.005 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCc
Q 019704 145 IAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEF 209 (337)
Q Consensus 145 ~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~ 209 (337)
+.++++..+++ +-+ +.. .++-|. |||-.-|.=+..+... -++.|+.||.+.+++
T Consensus 151 ~~~~~v~~~ir-~~~---~~~-~~~~Il---YGGSV~~~N~~~l~~~---~~iDG~LvG~Asl~a 204 (205)
T TIGR00419 151 AQPEVVHGSVR-AVK---EVN-ESVRVL---CGAGISTGEDAELAAQ---LGAEGVLLASGSLKA 204 (205)
T ss_pred HHHHHHHHHHH-hhh---hhc-CCceEE---EeCCCCHHHHHHHhcC---CCCCEEEEeeeeecC
Confidence 34566777777 211 211 234344 9999999999999876 459999999998875
No 206
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.45 E-value=48 Score=27.54 Aligned_cols=17 Identities=41% Similarity=0.610 Sum_probs=14.5
Q ss_pred CCCCCEEEEEcCCCChh
Q 019704 69 AASKPLVLWLNGGPGCS 85 (337)
Q Consensus 69 ~~~~Pl~lwlnGGPG~S 85 (337)
..++||||=|+|.||+.
T Consensus 49 ~p~KpLVlSfHG~tGtG 65 (127)
T PF06309_consen 49 NPRKPLVLSFHGWTGTG 65 (127)
T ss_pred CCCCCEEEEeecCCCCc
Confidence 45679999999999976
No 207
>PRK06762 hypothetical protein; Provisional
Probab=28.01 E-value=36 Score=28.65 Aligned_cols=13 Identities=15% Similarity=0.493 Sum_probs=11.8
Q ss_pred CEEEEEcCCCChh
Q 019704 73 PLVLWLNGGPGCS 85 (337)
Q Consensus 73 Pl~lwlnGGPG~S 85 (337)
|.++|+.|.|||.
T Consensus 2 ~~li~i~G~~GsG 14 (166)
T PRK06762 2 TTLIIIRGNSGSG 14 (166)
T ss_pred CeEEEEECCCCCC
Confidence 7899999999986
No 208
>KOG3877 consensus NADH:ubiquinone oxidoreductase, NDUFA10/42kDa subunit [Energy production and conversion]
Probab=27.75 E-value=46 Score=31.67 Aligned_cols=50 Identities=20% Similarity=0.539 Sum_probs=35.8
Q ss_pred chhhccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccc
Q 019704 112 WNKEANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGH 179 (337)
Q Consensus 112 W~~~an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~ 179 (337)
.++.+-|+-||-|+|+|-|- .|+++.+-|. |..||+++-..+|+ .|||+-
T Consensus 67 f~enSkvI~VeGnI~sGK~k--------------lAKelAe~Lg--f~hfP~~~~d~iyv--dsyg~D 116 (393)
T KOG3877|consen 67 FHENSKVIVVEGNIGSGKTK--------------LAKELAEQLG--FVHFPEFRMDDIYV--DSYGND 116 (393)
T ss_pred hcccceEEEEeCCcccCchh--------------HHHHHHHHhC--Ccccccccccceee--cccCcc
Confidence 45567789999999999651 2344444443 57899998777877 789874
No 209
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=26.80 E-value=57 Score=28.67 Aligned_cols=46 Identities=13% Similarity=0.063 Sum_probs=31.5
Q ss_pred HHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCc
Q 019704 154 LEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNP 205 (337)
Q Consensus 154 l~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng 205 (337)
...+++..|+....++-++|-|+||.++-.+|..- -.+++++.-=|
T Consensus 85 a~~~l~~~~~~~~~kig~vGfc~GG~~a~~~a~~~------~~~~a~v~~yg 130 (218)
T PF01738_consen 85 AVDYLRAQPEVDPGKIGVVGFCWGGKLALLLAARD------PRVDAAVSFYG 130 (218)
T ss_dssp HHHHHHCTTTCEEEEEEEEEETHHHHHHHHHHCCT------TTSSEEEEES-
T ss_pred HHHHHHhccccCCCcEEEEEEecchHHhhhhhhhc------cccceEEEEcC
Confidence 34566777766667899999999998876665332 13677766555
No 210
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=26.69 E-value=79 Score=29.87 Aligned_cols=37 Identities=19% Similarity=0.224 Sum_probs=25.8
Q ss_pred CceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcc
Q 019704 167 REFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPL 206 (337)
Q Consensus 167 ~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~ 206 (337)
.++-++|||-||+-+=++|.... ..+++..++-.+|+
T Consensus 120 ~klal~GHSrGGktAFAlALg~a---~~lkfsaLIGiDPV 156 (307)
T PF07224_consen 120 SKLALSGHSRGGKTAFALALGYA---TSLKFSALIGIDPV 156 (307)
T ss_pred ceEEEeecCCccHHHHHHHhccc---ccCchhheeccccc
Confidence 37999999999998888887554 22555555544443
No 211
>PF04414 tRNA_deacylase: D-aminoacyl-tRNA deacylase; InterPro: IPR007508 D-aminoacyl-tRNA deacylases hydrolyse the ester bond between the polynucleotide and the D-amino acid, thereby preventing the accumulation of such mis-acylated and metabolically inactive tRNA molecules. Several aminoacyl-tRNA synthetases have the ability to transfer the D-isomer of their amino acid onto their cognate tRNA. ; GO: 0016788 hydrolase activity, acting on ester bonds; PDB: 1YQE_A 2GFQ_B.
Probab=26.65 E-value=1.8e+02 Score=26.30 Aligned_cols=48 Identities=23% Similarity=0.230 Sum_probs=31.0
Q ss_pred CChHHHHHHHHHHHHHHHHHCCCCCC-CceEEEeeccccccHHHHHHHHHHh
Q 019704 141 VNDAIAARDNLAFLEGWYEKFPEYKN-REFFITGESYAGHYVPQLAQLIIQS 191 (337)
Q Consensus 141 ~~~~~~a~~~~~fl~~f~~~fp~~~~-~~~~i~GeSYgG~yvp~~a~~i~~~ 191 (337)
.+|...++.+.+.+...+..-++-.- ..+.-+| ||||+|.+.+.+++.
T Consensus 104 W~d~~a~~~vA~avl~~~~~~~~~~~~~~~ig~G---G~HYapr~t~~~l~~ 152 (213)
T PF04414_consen 104 WNDPDAAEAVARAVLEVLESDEKAECCPVAIGFG---GGHYAPRFTKLALET 152 (213)
T ss_dssp HT-HHHHHHHHHHHHHHHHHTTCSTT-EEEEEE----S-TT-HHHHHHHHHC
T ss_pred hCChHHHHHHHHHHHHHhcccccccccceeEEec---CcccchhhhhhhhcC
Confidence 35777778888888887776553321 3455555 799999999999874
No 212
>PF15253 STIL_N: SCL-interrupting locus protein N-terminus
Probab=26.58 E-value=92 Score=31.05 Aligned_cols=35 Identities=40% Similarity=0.859 Sum_probs=25.4
Q ss_pred eEEEEEEecCCCCceEEEEEeeccCCCCCCCEE-EEEcC
Q 019704 43 QYAGYITIDEKQQRALFYYFVEAATEAASKPLV-LWLNG 80 (337)
Q Consensus 43 ~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~-lwlnG 80 (337)
...|||+.+.. +++.+ ..|+.....+.||| +||.|
T Consensus 200 ~k~GfLTmDqt--Rkl~l-LlesDpk~~slPLVGiWlsG 235 (410)
T PF15253_consen 200 YKSGFLTMDQT--RKLLL-LLESDPKASSLPLVGIWLSG 235 (410)
T ss_pred cccceeeEccc--cceEE-EeccCCCccCCCceeeEecC
Confidence 57999999754 66766 67775555666776 89985
No 213
>PRK10949 protease 4; Provisional
Probab=26.34 E-value=38 Score=35.65 Aligned_cols=68 Identities=22% Similarity=0.314 Sum_probs=43.9
Q ss_pred ccccccccCccccccccccCCCCccCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccc--cccHHHHHHHHHHhcc
Q 019704 116 ANMLYLESPAGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYA--GHYVPQLAQLIIQSNM 193 (337)
Q Consensus 116 an~l~iDqP~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYg--G~yvp~~a~~i~~~n~ 193 (337)
+=+|.+|.|.|.|+. ..+.+.++|+.|-+ +++|++..|++|+ |.|+...|++|.-...
T Consensus 115 givL~i~s~gG~~~a---------------~~~eI~~ai~~fk~-----sGKpVvA~~~~~~s~~YyLASaAD~I~l~P~ 174 (618)
T PRK10949 115 GIVLDLKNFAGADQP---------------SMQYIGKALREFRD-----SGKPVYAVGDSYSQGQYYLASFANKIYLSPQ 174 (618)
T ss_pred EEEEEeCCCCCccHH---------------HHHHHHHHHHHHHH-----hCCeEEEEecCccchhhhhhhhCCEEEECCC
Confidence 336788888655433 12456777776643 2678999999997 7788888887775433
Q ss_pred c-cccceEEEe
Q 019704 194 K-LNLKGIAIG 203 (337)
Q Consensus 194 ~-inLkGi~ig 203 (337)
. +.+.|+...
T Consensus 175 G~v~~~G~~~~ 185 (618)
T PRK10949 175 GVVDLHGFATN 185 (618)
T ss_pred ceEEEeeeecc
Confidence 2 445555443
No 214
>KOG4540 consensus Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking, secretion, and vesicular transport; Lipid transport and metabolism]
Probab=25.36 E-value=67 Score=30.66 Aligned_cols=23 Identities=26% Similarity=0.502 Sum_probs=17.1
Q ss_pred CCCCCceEEEeeccccccHHHHH
Q 019704 163 EYKNREFFITGESYAGHYVPQLA 185 (337)
Q Consensus 163 ~~~~~~~~i~GeSYgG~yvp~~a 185 (337)
.|-...++++|||-||..+..+.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred hCCCceEEEeccccchHHHHHhc
Confidence 34356799999999997655544
No 215
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=25.36 E-value=67 Score=30.66 Aligned_cols=23 Identities=26% Similarity=0.502 Sum_probs=17.1
Q ss_pred CCCCCceEEEeeccccccHHHHH
Q 019704 163 EYKNREFFITGESYAGHYVPQLA 185 (337)
Q Consensus 163 ~~~~~~~~i~GeSYgG~yvp~~a 185 (337)
.|-...++++|||-||..+..+.
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG 294 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIASLLG 294 (425)
T ss_pred hCCCceEEEeccccchHHHHHhc
Confidence 34356799999999997655544
No 216
>COG3596 Predicted GTPase [General function prediction only]
Probab=24.60 E-value=72 Score=30.22 Aligned_cols=60 Identities=23% Similarity=0.280 Sum_probs=36.9
Q ss_pred CCCCEEEEEcC--CCChhhhhhhhcc-cCCCCCCCCCccccccccchh--hccccccccCcccccc
Q 019704 70 ASKPLVLWLNG--GPGCSSIGAGAFC-EHGPFKPSGDTLLRNEYSWNK--EANMLYLESPAGVGFS 130 (337)
Q Consensus 70 ~~~Pl~lwlnG--GPG~Ss~~~g~~~-e~GP~~~~~~~~~~n~~sW~~--~an~l~iDqP~g~GfS 130 (337)
...||.+.+-| |-|=||+--.+|+ |.=|...-+.....-.+.|.. .-||..+|.| |.|=+
T Consensus 36 ~~~pvnvLi~G~TG~GKSSliNALF~~~~~~v~~vg~~t~~~~~~~~~~~~~~l~lwDtP-G~gdg 100 (296)
T COG3596 36 EKEPVNVLLMGATGAGKSSLINALFQGEVKEVSKVGVGTDITTRLRLSYDGENLVLWDTP-GLGDG 100 (296)
T ss_pred ccCceeEEEecCCCCcHHHHHHHHHhccCceeeecccCCCchhhHHhhccccceEEecCC-Ccccc
Confidence 45799999999 7777898445663 333433111112223344544 3789999999 88844
No 217
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=24.51 E-value=1.3e+02 Score=30.02 Aligned_cols=49 Identities=10% Similarity=0.192 Sum_probs=37.9
Q ss_pred cCChHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHHHh
Q 019704 140 SVNDAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLIIQS 191 (337)
Q Consensus 140 ~~~~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~ 191 (337)
..+.++.|.|+-+.++.+ ++ +++.+++.++|-|+|.-..|.+-.++...
T Consensus 302 ~rtPe~~a~Dl~r~i~~y-~~--~w~~~~~~liGySfGADvlP~~~n~L~~~ 350 (456)
T COG3946 302 ERTPEQIAADLSRLIRFY-AR--RWGAKRVLLIGYSFGADVLPFAYNRLPPA 350 (456)
T ss_pred cCCHHHHHHHHHHHHHHH-HH--hhCcceEEEEeecccchhhHHHHHhCCHH
Confidence 355677888887766543 33 56788999999999999999998887643
No 218
>COG0149 TpiA Triosephosphate isomerase [Carbohydrate transport and metabolism]
Probab=24.39 E-value=2.5e+02 Score=26.08 Aligned_cols=67 Identities=22% Similarity=0.319 Sum_probs=47.8
Q ss_pred ccccccccccCCCCccCChHHHHHHHHHHHHHHHHH-CCCCCCCceEEEeeccccccHHHHHHHHHHhccccccceEEEe
Q 019704 125 AGVGFSYSANKSFYGSVNDAIAARDNLAFLEGWYEK-FPEYKNREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIG 203 (337)
Q Consensus 125 ~g~GfSy~~~~~~~~~~~~~~~a~~~~~fl~~f~~~-fp~~~~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~ig 203 (337)
+|||-|- +.+.++.+..|++..... |.+- ..+-|- |||-.=|.=+..+..+ .++.|+.||
T Consensus 171 IGTG~~a-----------t~~~a~~v~~~Ir~~~~~~~~~~--~~v~Il---YGGSV~~~N~~e~~~~---~~idG~LVG 231 (251)
T COG0149 171 IGTGKSA-----------SPADAEEVHAFIRAVLAELFGAE--EKVRIL---YGGSVKPGNAAELAAQ---PDIDGALVG 231 (251)
T ss_pred hcCCCCC-----------CHHHHHHHHHHHHHHHHHhcCCC--CCeEEE---EeCCcChhHHHHHhcC---CCCCeEEEc
Confidence 6888652 223457788888887764 4332 345554 8888888888888765 569999999
Q ss_pred CcccCcc
Q 019704 204 NPLLEFN 210 (337)
Q Consensus 204 ng~~d~~ 210 (337)
++.+++.
T Consensus 232 gAslka~ 238 (251)
T COG0149 232 GASLKAD 238 (251)
T ss_pred ceeecch
Confidence 9998874
No 219
>PF05436 MF_alpha_N: Mating factor alpha precursor N-terminus; InterPro: IPR008675 This entry contains the N-terminal regions of the Saccharomyces mating factor alpha precursor protein. All proteins in this family contain one or more copies of IPR006742 from INTERPRO further toward their C terminus.; GO: 0007618 mating, 0005576 extracellular region
Probab=23.89 E-value=2.7e+02 Score=21.52 Aligned_cols=36 Identities=17% Similarity=0.389 Sum_probs=21.2
Q ss_pred CCCcceEEEEEEecCCCCceEEEEEeeccCCCCCCCEEEEEc
Q 019704 38 QASFQQYAGYITIDEKQQRALFYYFVEAATEAASKPLVLWLN 79 (337)
Q Consensus 38 ~~~~~~~sGyl~v~~~~~~~lfy~f~~s~~~~~~~Pl~lwln 79 (337)
+++-.+--|||++.+.++-.+.=. ...+.--+|++|
T Consensus 32 ~iP~EAiiGyLDl~~d~Dva~lP~------sN~T~sGLLFVN 67 (86)
T PF05436_consen 32 NIPAEAIIGYLDLGGDNDVALLPF------SNSTHSGLLFVN 67 (86)
T ss_pred cCCHHHHhceeccCCCCceEEEEe------ecCCccEEEEEe
Confidence 455567789999987655443311 223445566666
No 220
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=23.26 E-value=1.2e+02 Score=29.21 Aligned_cols=44 Identities=14% Similarity=0.140 Sum_probs=33.4
Q ss_pred hHHHHHHHHHHHHHHHHHCCCCCCCceEEEeeccccccHHHHHHHHH
Q 019704 143 DAIAARDNLAFLEGWYEKFPEYKNREFFITGESYAGHYVPQLAQLII 189 (337)
Q Consensus 143 ~~~~a~~~~~fl~~f~~~fp~~~~~~~~i~GeSYgG~yvp~~a~~i~ 189 (337)
....++++...+.+.+.... .+++.|.|||.||.-+.+++..+-
T Consensus 106 ~~~~~~ql~~~V~~~l~~~g---a~~v~LigHS~GG~~~ry~~~~~~ 149 (336)
T COG1075 106 LAVRGEQLFAYVDEVLAKTG---AKKVNLIGHSMGGLDSRYYLGVLG 149 (336)
T ss_pred ccccHHHHHHHHHHHHhhcC---CCceEEEeecccchhhHHHHhhcC
Confidence 34456777888887666554 578999999999999887776665
No 221
>COG5510 Predicted small secreted protein [Function unknown]
Probab=22.23 E-value=1.2e+02 Score=20.31 Aligned_cols=18 Identities=28% Similarity=0.462 Sum_probs=8.7
Q ss_pred hhHHHHHHHHHHHHHHhh
Q 019704 3 LKQWIIIVSALFCTTILT 20 (337)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~ 20 (337)
++-++.+++++++++++.
T Consensus 3 k~t~l~i~~vll~s~lla 20 (44)
T COG5510 3 KKTILLIALVLLASTLLA 20 (44)
T ss_pred hHHHHHHHHHHHHHHHHH
Confidence 333455555555555543
No 222
>smart00581 PSP proline-rich domain in spliceosome associated proteins.
Probab=21.71 E-value=60 Score=22.80 Aligned_cols=18 Identities=17% Similarity=0.302 Sum_probs=13.8
Q ss_pred cHHHHHHhccCCCCcccc
Q 019704 315 RKDVQKALHAQLIGVTSW 332 (337)
Q Consensus 315 ~~dVq~ALhV~~~~~~~W 332 (337)
..+.|+|||+.....+.|
T Consensus 10 S~~LR~ALG~~~~~pPPW 27 (54)
T smart00581 10 SDELREALGLPPGQPPPW 27 (54)
T ss_pred CHHHHHHcCCCCCCCChH
Confidence 457899999987655567
No 223
>KOG3101 consensus Esterase D [General function prediction only]
Probab=20.17 E-value=1.1e+02 Score=28.17 Aligned_cols=40 Identities=20% Similarity=0.105 Sum_probs=22.1
Q ss_pred CCceEEEeeccccccHHHHHHHHHHhccccccceEEEeCcccCcc
Q 019704 166 NREFFITGESYAGHYVPQLAQLIIQSNMKLNLKGIAIGNPLLEFN 210 (337)
Q Consensus 166 ~~~~~i~GeSYgG~yvp~~a~~i~~~n~~inLkGi~igng~~d~~ 210 (337)
..++-|+|||+|||=+-.++.+ |. -..|++.--.|..+|.
T Consensus 140 ~~k~~IfGHSMGGhGAl~~~Lk----n~-~kykSvSAFAPI~NP~ 179 (283)
T KOG3101|consen 140 PLKVGIFGHSMGGHGALTIYLK----NP-SKYKSVSAFAPICNPI 179 (283)
T ss_pred chhcceeccccCCCceEEEEEc----Cc-ccccceeccccccCcc
Confidence 3468999999999843222211 11 1245555555555554
Done!