Query 019706
Match_columns 337
No_of_seqs 226 out of 2196
Neff 5.2
Searched_HMMs 29240
Date Mon Mar 25 05:54:33 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019706.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019706hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wur_A GTP cyclohydrolase I; b 100.0 3.1E-74 1E-78 528.2 16.2 185 138-333 33-218 (220)
2 1is8_A GTP cyclohydrolase I; e 100.0 3.1E-74 1E-78 530.7 13.9 182 139-331 47-229 (230)
3 1a8r_A GTP cyclohydrolase I; p 100.0 1.2E-72 4.3E-77 518.8 14.9 186 137-333 33-220 (221)
4 1wur_A GTP cyclohydrolase I; b 100.0 7E-35 2.4E-39 267.5 9.0 94 4-104 125-218 (220)
5 1is8_A GTP cyclohydrolase I; e 100.0 8.5E-35 2.9E-39 268.3 7.8 92 4-102 138-229 (230)
6 1a8r_A GTP cyclohydrolase I; p 100.0 4.1E-34 1.4E-38 263.0 8.1 93 4-103 127-219 (221)
7 4f8b_A NADPH-dependent 7-cyano 92.7 0.55 1.9E-05 41.2 9.1 78 210-289 44-122 (165)
8 3uxj_A NADPH-dependent 7-cyano 66.2 12 0.00042 35.4 6.8 69 217-289 192-261 (290)
9 3pg6_A E3 ubiquitin-protein li 53.2 6.9 0.00024 34.1 2.4 54 206-262 48-104 (159)
10 4dh4_A MIF; trimer, isomerase; 36.0 1.1E+02 0.0039 23.6 7.1 64 263-330 14-80 (114)
11 3djh_A Macrophage migration in 35.0 56 0.0019 25.6 5.0 62 264-329 14-78 (114)
12 3v9o_A Dihydroneopterin aldola 31.7 72 0.0025 26.6 5.4 43 12-54 76-120 (143)
13 3r2e_A Dihydroneopterin aldola 31.4 54 0.0018 27.5 4.6 46 12-57 78-125 (143)
14 3kan_A D-dopachrome tautomeras 29.9 78 0.0027 25.1 5.1 51 264-316 14-67 (117)
15 4aey_A D-erythro-7,8-dihydrone 29.1 74 0.0025 27.1 5.1 44 13-56 95-140 (156)
16 4f8b_A NADPH-dependent 7-cyano 28.5 82 0.0028 27.4 5.3 50 4-53 73-122 (165)
17 2o90_A DHNA, dihydroneopterin 27.6 83 0.0028 25.2 5.0 43 13-55 55-99 (122)
18 3r2e_A Dihydroneopterin aldola 26.2 75 0.0026 26.6 4.6 87 205-293 22-125 (143)
19 3o1k_A Dihydroneopterin aldola 25.8 80 0.0027 25.9 4.6 44 13-56 70-115 (132)
20 1nbu_A DHNA, probable dihydron 25.7 1.1E+02 0.0039 24.3 5.5 32 22-54 67-99 (119)
21 2q2k_A Hypothetical protein; p 25.3 47 0.0016 24.2 2.6 21 138-158 50-70 (70)
22 2o90_A DHNA, dihydroneopterin 22.9 1.3E+02 0.0045 24.0 5.3 82 210-293 3-101 (122)
23 1b9l_A Protein (epimerase); is 22.9 1.2E+02 0.004 24.2 5.0 43 13-55 59-103 (120)
24 1sql_A Dihydroneopterin aldola 21.2 1.4E+02 0.0047 24.9 5.3 37 22-58 86-123 (146)
25 1xky_A Dihydrodipicolinate syn 21.2 46 0.0016 30.8 2.5 68 223-293 7-91 (301)
26 3o1k_A Dihydroneopterin aldola 21.1 1.1E+02 0.0038 25.0 4.6 82 209-292 17-115 (132)
27 3lq9_A DNA-damage-inducible tr 20.5 35 0.0012 28.9 1.3 71 261-331 29-107 (134)
28 4aey_A D-erythro-7,8-dihydrone 20.3 1E+02 0.0035 26.2 4.3 83 208-292 41-140 (156)
29 1nbu_A DHNA, probable dihydron 20.2 1.3E+02 0.0045 23.9 4.7 77 210-289 4-98 (119)
No 1
>1wur_A GTP cyclohydrolase I; beta barrel, protein-inhibitor complex, pteridine tetrahydrobiopterin, structural genomics, NPPSFA; HET: 8DG; 1.82A {Thermus thermophilus} SCOP: d.96.1.1 PDB: 1wm9_A* 1wuq_A*
Probab=100.00 E-value=3.1e-74 Score=528.17 Aligned_cols=185 Identities=37% Similarity=0.544 Sum_probs=167.8
Q ss_pred cchHHHHHHHHHHHHHhCCCCCCccccCchHHHHHHHHHhhccchhhhccCcccCccccCCCCCcccCCCCceEEEecce
Q 019706 138 SANQGMVAAVVSILRSLGEDPLREELLGTPRRFVKWLMNFENSIIDMKLNGFAFGRMDLLKPNGEVSRSNEHIHSELNLS 217 (337)
Q Consensus 138 ~~~~~~e~avr~lL~alGeDp~regL~~TP~RVak~~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~mViv~~I~ 217 (337)
.+.++|++||++||++|||||+||||.+||+||||||.++ |+||..++.+.++.. .|++++++||+|+||+
T Consensus 33 ~d~~~ie~avr~iL~~lGeDp~RegL~~TP~RvAk~~~e~--------f~Gy~~~~~~~l~~~-~F~~~~~emVivkdI~ 103 (220)
T 1wur_A 33 VDLERLQALAAEWLQVIGEDPGREGLLKTPERVAKAWAFL--------TRGYRQRLEEVVGGA-VFPAEGSEMVVVKGVE 103 (220)
T ss_dssp CCHHHHHHHHHHHHHHTTCCTTSGGGTTHHHHHHHHHHHH--------TGGGGCCHHHHHTTC-EEECSCSSCEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHhCCCCCccchhhhHHHHHHHHHHH--------hcccCCChHHhhccc-cCCCCCCcEEEEeCCc
Confidence 3446899999999999999999999999999999999987 456666655554320 2355789999999999
Q ss_pred eeecccccccceeeEEEEEEEeCCCCccccchhHHHHHHHHhcchhhHHHHHHHHHHHHHhHc-CCCeEEEEEeeeecee
Q 019706 218 FWSQCEHHLLPFHGVVHIGYFCAEGLNPIGKSLLQSIVHFYGFKLQVQERLNRQIAETVSSLL-GGDVIVVVEASHTCMI 296 (337)
Q Consensus 218 f~S~CEHHLLPf~G~~hVaYiP~~~~~viGLSKl~RlV~~~ArRlQlQERLT~qIA~aL~~~l-~~GVaV~i~A~H~Cm~ 296 (337)
|||+||||||||+|++||||||+ ++|+|||||+||||+||||||+|||||+|||++|++.+ ++||+|+|+|+||||+
T Consensus 104 f~S~CEHHllPf~G~ahVaYiP~--~kVvGLSKlaRiV~~farRlQvQERLT~qIAdal~~~L~p~GVaVvieA~H~CM~ 181 (220)
T 1wur_A 104 FYSMCEHHLLPFFGKVHIGYIPD--GKILGLSKFARIVDMFARRLQVQERLAVQIAEAIQEVLEPQGVGVVVEGVHLCMM 181 (220)
T ss_dssp EEEEETTTCCEEEEEEEEEEECS--SEEECHHHHHHHHHHHHSSEECHHHHHHHHHHHHHHHHCCSEEEEEEEEEEHHHH
T ss_pred EEEecCCCCCceEEEEEEEEeCC--CeeecHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhCCCcEEEEEEEEEeCch
Confidence 99999999999999999999995 68999999999999999999999999999999999988 5999999999999999
Q ss_pred ecccccCCceEEEeeeeeeecCChHHHHHHHHccCCC
Q 019706 297 ARGIEKFGSSTATIAVLGRFSTDHSARAMFLQNIPKT 333 (337)
Q Consensus 297 ~RGv~~~~s~t~T~a~~G~F~~~~~~r~Efl~li~~~ 333 (337)
||||+|++|+|+|++++|.|++|+.+|+|||++|+..
T Consensus 182 mRGV~k~~s~t~Tsa~~G~F~~d~~~R~Efl~li~~~ 218 (220)
T 1wur_A 182 MRGVEKQHSRTVTSAMLGVFRENQKTREEFLSHLRDG 218 (220)
T ss_dssp SSTTCCSSCEEEEEEEEEHHHHCHHHHHHHHHHTC--
T ss_pred hhCcccCCCeEEEEeeeeeeCCCHHHHHHHHHHhccc
Confidence 9999999999999999999999999999999999764
No 2
>1is8_A GTP cyclohydrolase I; enzyme-regulatory protein complex, hydrolase/protein binding complex; HET: PHE; 2.70A {Rattus norvegicus} SCOP: d.96.1.1 PDB: 1is7_A* 1wpl_A* 1fb1_A
Probab=100.00 E-value=3.1e-74 Score=530.74 Aligned_cols=182 Identities=41% Similarity=0.620 Sum_probs=165.0
Q ss_pred chHHHHHHHHHHHHHhCCCCCCccccCchHHHHHHHHHhhccchhhhccCcccCccccCCCCCcccCCCCceEEEeccee
Q 019706 139 ANQGMVAAVVSILRSLGEDPLREELLGTPRRFVKWLMNFENSIIDMKLNGFAFGRMDLLKPNGEVSRSNEHIHSELNLSF 218 (337)
Q Consensus 139 ~~~~~e~avr~lL~alGeDp~regL~~TP~RVak~~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~mViv~~I~f 218 (337)
+.++|++||++||++|||||+||||.+||+||||||.++ ++||..++.+.++.. .|.+++++||+|+||+|
T Consensus 47 ~~~~ie~avr~iL~~lGeDp~ReGL~~TP~RVAka~~e~--------f~Gy~~~~~~~~~~~-~F~~~~~emVivkdI~f 117 (230)
T 1is8_A 47 NLPNLAAAYSSILRSLGEDPQRQGLLKTPWRAATAMQFF--------TKGYQETISDVLNDA-IFDEDHDEMVIVKDIDM 117 (230)
T ss_dssp HHHHHHHHHHHHHHHHTCCTTSTTTTTHHHHHHHHHHHH--------TGGGGCCTHHHHSSS-CCEEEECSCEEEEEEEE
T ss_pred cHHHHHHHHHHHHHHhCCCCCccchhhHHHHHHHHHHHH--------hcccCCChHHhhccc-ccCCCCCceEEEeCCcE
Confidence 345899999999999999999999999999999999987 557776666654311 23456889999999999
Q ss_pred eecccccccceeeEEEEEEEeCCCCccccchhHHHHHHHHhcchhhHHHHHHHHHHHHHhHc-CCCeEEEEEeeeeceee
Q 019706 219 WSQCEHHLLPFHGVVHIGYFCAEGLNPIGKSLLQSIVHFYGFKLQVQERLNRQIAETVSSLL-GGDVIVVVEASHTCMIA 297 (337)
Q Consensus 219 ~S~CEHHLLPf~G~~hVaYiP~~~~~viGLSKl~RlV~~~ArRlQlQERLT~qIA~aL~~~l-~~GVaV~i~A~H~Cm~~ 297 (337)
||+||||||||+|+|||||||+ ++|+|||||+||||+||||||+|||||+|||++|++.+ ++||+|+|+|+||||+|
T Consensus 118 ~S~CEHHllPf~GkahVaYiP~--gkViGLSKlaRiVd~farRlQvQERLT~qIAdaL~~~L~p~GVaVvieA~H~CM~m 195 (230)
T 1is8_A 118 FSMCEHHLVPFVGRVHIGYLPN--KQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALQPAGVGVVIEATHMCMVM 195 (230)
T ss_dssp EEEETTTCCEEEEEEEEEEECS--EECCCHHHHHHHHHHHHSSEECHHHHHHHHHHHHHHHHCCSEEEEEEEEEEHHHHT
T ss_pred EEecCcCcCceeeEEEEEEcCC--CeeccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhCCCceEEEEEEEEecchh
Confidence 9999999999999999999995 68999999999999999999999999999999999988 59999999999999999
Q ss_pred cccccCCceEEEeeeeeeecCChHHHHHHHHccC
Q 019706 298 RGIEKFGSSTATIAVLGRFSTDHSARAMFLQNIP 331 (337)
Q Consensus 298 RGv~~~~s~t~T~a~~G~F~~~~~~r~Efl~li~ 331 (337)
|||+|++|+|+|++++|.|++|+.+|+|||++|+
T Consensus 196 RGV~k~~s~t~Tsa~~G~F~~d~~~R~EFl~li~ 229 (230)
T 1is8_A 196 RGVQKMNSKTVTSTMLGVFREDPKTREEFLTLIR 229 (230)
T ss_dssp TC--CTTCEEEEEEEEEHHHHCHHHHHHHHHHHC
T ss_pred cCcccCCCeEEEEEEEEEecCCHHHHHHHHHHhc
Confidence 9999999999999999999999999999999986
No 3
>1a8r_A GTP cyclohydrolase I; purine hydrolysis, pterine synthesis; HET: GTP; 2.10A {Escherichia coli} SCOP: d.96.1.1 PDB: 1n3r_A* 1fbx_A 1gtp_A 1n3s_A* 1n3t_F* 1a9c_A* 4du6_A*
Probab=100.00 E-value=1.2e-72 Score=518.85 Aligned_cols=186 Identities=27% Similarity=0.441 Sum_probs=168.1
Q ss_pred ccchHHHHHHHHHHHHHhCCCCCCccccCchHHHHHHH-HHhhccchhhhccCcccCccccCCCCCcccCCCCceEEEec
Q 019706 137 ESANQGMVAAVVSILRSLGEDPLREELLGTPRRFVKWL-MNFENSIIDMKLNGFAFGRMDLLKPNGEVSRSNEHIHSELN 215 (337)
Q Consensus 137 ~~~~~~~e~avr~lL~alGeDp~regL~~TP~RVak~~-~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~mViv~~ 215 (337)
+...+++++||++||++|||||+||||.+||+|||||| .++ ++||..++...+.. +.++.++++||+|+|
T Consensus 33 ~~~~~~ie~avr~iL~~lGeDp~regL~~TP~RvAka~~~e~--------f~G~~~~~~~~l~~-f~~~~~~~emViv~d 103 (221)
T 1a8r_A 33 ETRKSLIAGHMTEIMQLLNLDLADDSLMETPHRIAKMYVDEI--------FSGLDYANFPKITL-IENKMKVDEMVTVRD 103 (221)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCTTSHHHHTHHHHHHHHHHHTT--------TGGGSGGGCCCCCE-EECTTCCCSCEEEEE
T ss_pred HHHHHHHHHHHHHHHHHhCCCCCchhhhhHHHHHHHHHHHHH--------HcCCCCCchhhhce-ecccCCCCCeEEEeC
Confidence 34456899999999999999999999999999999999 576 55776665554431 112346899999999
Q ss_pred ceeeecccccccceeeEEEEEEEeCCCCccccchhHHHHHHHHhcchhhHHHHHHHHHHHHHhHc-CCCeEEEEEeeeec
Q 019706 216 LSFWSQCEHHLLPFHGVVHIGYFCAEGLNPIGKSLLQSIVHFYGFKLQVQERLNRQIAETVSSLL-GGDVIVVVEASHTC 294 (337)
Q Consensus 216 I~f~S~CEHHLLPf~G~~hVaYiP~~~~~viGLSKl~RlV~~~ArRlQlQERLT~qIA~aL~~~l-~~GVaV~i~A~H~C 294 (337)
|+|||+||||||||+|++||||||+ ++|+|||||+|+|++||||||+|||||+|||++|++.+ |+||+|+|+|+|||
T Consensus 104 I~f~S~CEHHllPf~G~~hVaYiP~--~~VvGLSKlaRiv~~farRlQvQErlT~qIadal~~~l~p~GV~VvieA~H~C 181 (221)
T 1a8r_A 104 ITLTSTCESHFVTIDGKATVAYIPK--DSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVHYC 181 (221)
T ss_dssp EEEEEEETTTTEEEEEEEEEEECCS--SEEECHHHHHHHHHHHHSSEECHHHHHHHHHHHHHHHHTCSCEEEEEEEEEHH
T ss_pred CcEEeecCccCCceeEEEEEEEecC--CccccHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHhCCCceEEEEEEEEee
Confidence 9999999999999999999999996 58999999999999999999999999999999999988 59999999999999
Q ss_pred eeecccccCCceEEEeeeeeeecCChHHHHHHHHccCCC
Q 019706 295 MIARGIEKFGSSTATIAVLGRFSTDHSARAMFLQNIPKT 333 (337)
Q Consensus 295 m~~RGv~~~~s~t~T~a~~G~F~~~~~~r~Efl~li~~~ 333 (337)
|+||||+|++|+|+|++++|.|++|+.+|+|||++|+..
T Consensus 182 m~mRGv~k~~s~t~Tsa~~G~F~~d~~~R~Efl~li~~~ 220 (221)
T 1a8r_A 182 VKARGIRDATSATTTTSLGGLFKSSQNTRHEFLRAVRHH 220 (221)
T ss_dssp HHSSTTCCSSCEEEEEEECTHHHHCHHHHHHHHHHSCCC
T ss_pred ecccCCCCCCCEEEEeeeeeEeCCCHHHHHHHHHHhccC
Confidence 999999999999999999999999999999999999753
No 4
>1wur_A GTP cyclohydrolase I; beta barrel, protein-inhibitor complex, pteridine tetrahydrobiopterin, structural genomics, NPPSFA; HET: 8DG; 1.82A {Thermus thermophilus} SCOP: d.96.1.1 PDB: 1wm9_A* 1wuq_A*
Probab=100.00 E-value=7e-35 Score=267.50 Aligned_cols=94 Identities=31% Similarity=0.471 Sum_probs=87.1
Q ss_pred CCCeEEecchhhHHHHHHhcCcchHHHHHHHHHHHHHhccCCCeeEEEEEeeeccccccccccCCCCCCCceEEEEeEEE
Q 019706 4 LVNEFWDLSKFSRVAEVFSKRLQNPQRLADEVCSALQHGIKPAGVAVILQCSHLHFPNLESAFLDPNHQGWVKALVSSGA 83 (337)
Q Consensus 4 ~~g~V~GLSKlaRvv~~~ArRlQ~QERLt~qIa~al~~~l~p~GVaV~iea~H~Cm~~~~~~~~~~~~~~~~~t~Ts~~~ 83 (337)
|+|+|+|||||+||||+||||||+|||||+|||++|++.|+|+||+|+|+|+||||++||+ ++.+ +.|+|++++
T Consensus 125 P~~kVvGLSKlaRiV~~farRlQvQERLT~qIAdal~~~L~p~GVaVvieA~H~CM~mRGV-----~k~~-s~t~Tsa~~ 198 (220)
T 1wur_A 125 PDGKILGLSKFARIVDMFARRLQVQERLAVQIAEAIQEVLEPQGVGVVVEGVHLCMMMRGV-----EKQH-SRTVTSAML 198 (220)
T ss_dssp CSSEEECHHHHHHHHHHHHSSEECHHHHHHHHHHHHHHHHCCSEEEEEEEEEEHHHHSSTT-----CCSS-CEEEEEEEE
T ss_pred CCCeeecHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHhhCCCcEEEEEEEEEeCchhhCc-----ccCC-CeEEEEeee
Confidence 6999999999999999999999999999999999999999999999999999999999986 3444 899999999
Q ss_pred eeecCCChHHHHHHHHHHhcC
Q 019706 84 GVFENENADIWSDLLSLLRFR 104 (337)
Q Consensus 84 G~f~~~~~~~r~efl~li~~~ 104 (337)
|+|++| +.+|+|||++|+.+
T Consensus 199 G~F~~d-~~~R~Efl~li~~~ 218 (220)
T 1wur_A 199 GVFREN-QKTREEFLSHLRDG 218 (220)
T ss_dssp EHHHHC-HHHHHHHHHHTC--
T ss_pred eeeCCC-HHHHHHHHHHhccc
Confidence 999986 89999999999753
No 5
>1is8_A GTP cyclohydrolase I; enzyme-regulatory protein complex, hydrolase/protein binding complex; HET: PHE; 2.70A {Rattus norvegicus} SCOP: d.96.1.1 PDB: 1is7_A* 1wpl_A* 1fb1_A
Probab=100.00 E-value=8.5e-35 Score=268.27 Aligned_cols=92 Identities=28% Similarity=0.530 Sum_probs=85.7
Q ss_pred CCCeEEecchhhHHHHHHhcCcchHHHHHHHHHHHHHhccCCCeeEEEEEeeeccccccccccCCCCCCCceEEEEeEEE
Q 019706 4 LVNEFWDLSKFSRVAEVFSKRLQNPQRLADEVCSALQHGIKPAGVAVILQCSHLHFPNLESAFLDPNHQGWVKALVSSGA 83 (337)
Q Consensus 4 ~~g~V~GLSKlaRvv~~~ArRlQ~QERLt~qIa~al~~~l~p~GVaV~iea~H~Cm~~~~~~~~~~~~~~~~~t~Ts~~~ 83 (337)
|+|+|+|||||+||||+||||||+|||||+|||++|++.|+|+||+|+|+|+||||++||+ ++. +++|+|++++
T Consensus 138 P~gkViGLSKlaRiVd~farRlQvQERLT~qIAdaL~~~L~p~GVaVvieA~H~CM~mRGV-----~k~-~s~t~Tsa~~ 211 (230)
T 1is8_A 138 PNKQVLGLSKLARIVEIYSRRLQVQERLTKQIAVAITEALQPAGVGVVIEATHMCMVMRGV-----QKM-NSKTVTSTML 211 (230)
T ss_dssp CSEECCCHHHHHHHHHHHHSSEECHHHHHHHHHHHHHHHHCCSEEEEEEEEEEHHHHTTC-------CT-TCEEEEEEEE
T ss_pred CCCeeccHHHHHHHHHHHhccchhHHHHHHHHHHHHHHhhCCCceEEEEEEEEecchhcCc-----ccC-CCeEEEEEEE
Confidence 6999999999999999999999999999999999999999999999999999999999986 344 4899999999
Q ss_pred eeecCCChHHHHHHHHHHh
Q 019706 84 GVFENENADIWSDLLSLLR 102 (337)
Q Consensus 84 G~f~~~~~~~r~efl~li~ 102 (337)
|+|++| +.+|+|||++|+
T Consensus 212 G~F~~d-~~~R~EFl~li~ 229 (230)
T 1is8_A 212 GVFRED-PKTREEFLTLIR 229 (230)
T ss_dssp EHHHHC-HHHHHHHHHHHC
T ss_pred EEecCC-HHHHHHHHHHhc
Confidence 999986 799999999985
No 6
>1a8r_A GTP cyclohydrolase I; purine hydrolysis, pterine synthesis; HET: GTP; 2.10A {Escherichia coli} SCOP: d.96.1.1 PDB: 1n3r_A* 1fbx_A 1gtp_A 1n3s_A* 1n3t_F* 1a9c_A* 4du6_A*
Probab=100.00 E-value=4.1e-34 Score=263.03 Aligned_cols=93 Identities=23% Similarity=0.315 Sum_probs=87.5
Q ss_pred CCCeEEecchhhHHHHHHhcCcchHHHHHHHHHHHHHhccCCCeeEEEEEeeeccccccccccCCCCCCCceEEEEeEEE
Q 019706 4 LVNEFWDLSKFSRVAEVFSKRLQNPQRLADEVCSALQHGIKPAGVAVILQCSHLHFPNLESAFLDPNHQGWVKALVSSGA 83 (337)
Q Consensus 4 ~~g~V~GLSKlaRvv~~~ArRlQ~QERLt~qIa~al~~~l~p~GVaV~iea~H~Cm~~~~~~~~~~~~~~~~~t~Ts~~~ 83 (337)
|+|+|+|||||+|+||+||||||+|||||+|||++|++.|+|+||+|+|+|+||||.+||+ ++.+ +.|+|++++
T Consensus 127 P~~~VvGLSKlaRiv~~farRlQvQErlT~qIadal~~~l~p~GV~VvieA~H~Cm~mRGv-----~k~~-s~t~Tsa~~ 200 (221)
T 1a8r_A 127 PKDSVIGLSKINRIVQFFAQRPQVQERLTQQILIALQTLLGTNNVAVSIDAVHYCVKARGI-----RDAT-SATTTTSLG 200 (221)
T ss_dssp CSSEEECHHHHHHHHHHHHSSEECHHHHHHHHHHHHHHHHTCSCEEEEEEEEEHHHHSSTT-----CCSS-CEEEEEEEC
T ss_pred cCCccccHHHHHHHHHHHHcCcccHHHHHHHHHHHHHHHhCCCceEEEEEEEEeeecccCC-----CCCC-CEEEEeeee
Confidence 7899999999999999999999999999999999999999999999999999999999986 3444 899999999
Q ss_pred eeecCCChHHHHHHHHHHhc
Q 019706 84 GVFENENADIWSDLLSLLRF 103 (337)
Q Consensus 84 G~f~~~~~~~r~efl~li~~ 103 (337)
|+|++| +.+|+|||++++.
T Consensus 201 G~F~~d-~~~R~Efl~li~~ 219 (221)
T 1a8r_A 201 GLFKSS-QNTRHEFLRAVRH 219 (221)
T ss_dssp THHHHC-HHHHHHHHHHSCC
T ss_pred eEeCCC-HHHHHHHHHHhcc
Confidence 999986 8999999999964
No 7
>4f8b_A NADPH-dependent 7-cyano-7-deazaguanine reductase; beta barrel, protein thioimide complex, pterin binding fold, fold; HET: GD1 PE4; 2.50A {Bacillus subtilis subsp} PDB: 4fgc_A*
Probab=92.71 E-value=0.55 Score=41.18 Aligned_cols=78 Identities=14% Similarity=0.053 Sum_probs=67.0
Q ss_pred eEEEecceeeecccccccceeeEEEEEEEeCCCCccccchhHHHHHHHHhcchhhHHHHHHHHHHHHHhHc-CCCeEEEE
Q 019706 210 IHSELNLSFWSQCEHHLLPFHGVVHIGYFCAEGLNPIGKSLLQSIVHFYGFKLQVQERLNRQIAETVSSLL-GGDVIVVV 288 (337)
Q Consensus 210 mViv~~I~f~S~CEHHLLPf~G~~hVaYiP~~~~~viGLSKl~RlV~~~ArRlQlQERLT~qIA~aL~~~l-~~GVaV~i 288 (337)
.|-+.-=.|.|+|.=-=.|=||++.|-|+|+ .++|=+-.|-+.+.-|=-+---+|..+.+|.+-|.+++ |+=+.|..
T Consensus 44 ~I~~~~PEFtSlCPvTGQPDfatI~I~Y~P~--~~~vE~kSLKlYL~SFRnh~~FHE~cvn~I~~DL~~~~~P~~L~V~a 121 (165)
T 4f8b_A 44 FVKFNCPEFTSLCPKTGQPDFATIYISYIPD--EKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPRYIEVWG 121 (165)
T ss_dssp EEEEEEEEEEEECTTTCCEEEEEEEEEEECS--SEEECHHHHHHHHHTTTTCBCCHHHHHHHHHHHHHHHHCCSEEEEEE
T ss_pred EEEEecccceecCCCCCCCcEEEEEEEEEeC--CccCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhhCCcEEEEEE
Confidence 4445555699999999999999999999997 46688888999999999999999999999999999988 57666665
Q ss_pred E
Q 019706 289 E 289 (337)
Q Consensus 289 ~ 289 (337)
.
T Consensus 122 ~ 122 (165)
T 4f8b_A 122 K 122 (165)
T ss_dssp E
T ss_pred E
Confidence 4
No 8
>3uxj_A NADPH-dependent 7-cyano-7-deazaguanine reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE PRF NAP; 1.40A {Vibrio cholerae o1 biovar el tor} PDB: 3s19_A* 3rjb_A* 3bp1_A* 3uxv_A* 3rzp_A* 3rj4_A* 3rzq_A* 4ghm_A*
Probab=66.16 E-value=12 Score=35.41 Aligned_cols=69 Identities=17% Similarity=0.179 Sum_probs=59.3
Q ss_pred eeeecccccccceeeEEEEEEEeCCCCccccchhHHHHHHHHhcchhhHHHHHHHHHHHHHhHc-CCCeEEEEE
Q 019706 217 SFWSQCEHHLLPFHGVVHIGYFCAEGLNPIGKSLLQSIVHFYGFKLQVQERLNRQIAETVSSLL-GGDVIVVVE 289 (337)
Q Consensus 217 ~f~S~CEHHLLPf~G~~hVaYiP~~~~~viGLSKl~RlV~~~ArRlQlQERLT~qIA~aL~~~l-~~GVaV~i~ 289 (337)
.|.|.|.=-=.|=||+++|-|+|+ . +=+-.|-+.+--|--+---.|..|.+|.+-|.+.+ |+-..|...
T Consensus 192 efts~CPvTGQPDfati~I~Y~p~---~-vE~kSLk~Yl~SFRnh~~FHE~cvn~I~~DL~~~~~P~~L~V~a~ 261 (290)
T 3uxj_A 192 LLKSNCLITNQPDWGSVEIAYHGA---K-MNREALLRYLVSFREHNEFHEQCVERIFTDIMRYCQPQSLTVYAR 261 (290)
T ss_dssp EEEEEETTTCCEEEEEEEEEEEEE---E-ECHHHHHHHHHTTTTCEECHHHHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred ccccCCCCCCCCceEEEEEEEeCC---c-cCHHHHHHHHHHHhccCChHHHHHHHHHHHHHHhcCCCEEEEEEE
Confidence 499999999999999999999995 2 57778888888888888999999999999999988 576665543
No 9
>3pg6_A E3 ubiquitin-protein ligase DTX3L; DNA-damage, metal-binding, nucleus, phosphorylation, chromatin regulator, UBL conjugation pathway, zinc-finger; HET: CIT; 1.70A {Homo sapiens}
Probab=53.20 E-value=6.9 Score=34.06 Aligned_cols=54 Identities=20% Similarity=0.251 Sum_probs=39.0
Q ss_pred CCCceEEEecceeeeccccccc---ceeeEEEEEEEeCCCCccccchhHHHHHHHHhcch
Q 019706 206 SNEHIHSELNLSFWSQCEHHLL---PFHGVVHIGYFCAEGLNPIGKSLLQSIVHFYGFKL 262 (337)
Q Consensus 206 ~~~~mViv~~I~f~S~CEHHLL---Pf~G~~hVaYiP~~~~~viGLSKl~RlV~~~ArRl 262 (337)
+++-++|.=+|+=--.=+.|== ||.|.-.+||+|+.. -|.--|..|-..|-+||
T Consensus 48 ~~gtI~I~Y~ip~GiQg~~HPnPGk~y~G~~R~AYLPdn~---eGr~VL~LL~~AF~~rL 104 (159)
T 3pg6_A 48 SFGTIVITYSMKAGIQTEEHPNPGKRYPGIQRTAYLPDNK---EGRKVLKLLYRAFDQKL 104 (159)
T ss_dssp TSEEEEEEEEECCEECCTTSSSTTCEECCEEEEEEEEESH---HHHHHHHHHHHHHHTTC
T ss_pred CCCeEEEEEEcCCccccCcCCCCCCccCCCCeEEECCCCH---HHHHHHHHHHHHHHcCC
Confidence 4567888888886656566654 699999999999763 46655666666666665
No 10
>4dh4_A MIF; trimer, isomerase; 1.82A {Toxoplasma gondii}
Probab=35.98 E-value=1.1e+02 Score=23.62 Aligned_cols=64 Identities=16% Similarity=0.114 Sum_probs=42.5
Q ss_pred hhHHHHHHHHHHHHHhHc--C-CCeEEEEEeeeeceeecccccCCceEEEeeeeeeecCChHHHHHHHHcc
Q 019706 263 QVQERLNRQIAETVSSLL--G-GDVIVVVEASHTCMIARGIEKFGSSTATIAVLGRFSTDHSARAMFLQNI 330 (337)
Q Consensus 263 QlQERLT~qIA~aL~~~l--~-~GVaV~i~A~H~Cm~~RGv~~~~s~t~T~a~~G~F~~~~~~r~Efl~li 330 (337)
+..+.|-.++..++.+.+ | .=|+|.++.. .||...|-.++.+...-....| . +++.++++...|
T Consensus 14 ~~~~~l~~~ls~~~a~~lgKPe~~v~V~~~~~-~~m~fgGs~~p~a~v~i~~ig~-~--~~e~~~~l~~~i 80 (114)
T 4dh4_A 14 AQQDALLKDAEKAVADALGKPLSYVMVGYSQT-GQMRFGGSSDPCAFIRVASIGG-I--TSSTNCKIAAAL 80 (114)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCEEEEEEC-SCCCBTTBCSCCEEEEEEEESC-C--CHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHCCChHHEEEEEeCC-ceEEECCcCCCeEEEEEEEEcC-C--CHHHHHHHHHHH
Confidence 345778888888888877 3 4688888754 5888888877766655555544 2 455555554433
No 11
>3djh_A Macrophage migration inhibitory factor; homotrimer, cytokine, inflammatory response, isomerase, phosphoprotein; 1.25A {Homo sapiens} SCOP: d.80.1.3 PDB: 1ca7_A* 1ljt_A* 2ooh_A* 2ooz_A* 3b9s_A* 2oow_A* 3ce4_A 3dji_A* 3ijg_A* 3ijj_A* 3smb_A* 3smc_A* 3u18_A* 4f2k_A* 1gd0_A* 1gcz_A* 3jsf_A* 3jsg_A* 3jtu_A* 3l5p_A* ...
Probab=34.99 E-value=56 Score=25.61 Aligned_cols=62 Identities=11% Similarity=0.157 Sum_probs=41.9
Q ss_pred hHHHHHHHHHHHHHhHcC---CCeEEEEEeeeeceeecccccCCceEEEeeeeeeecCChHHHHHHHHc
Q 019706 264 VQERLNRQIAETVSSLLG---GDVIVVVEASHTCMIARGIEKFGSSTATIAVLGRFSTDHSARAMFLQN 329 (337)
Q Consensus 264 lQERLT~qIA~aL~~~l~---~GVaV~i~A~H~Cm~~RGv~~~~s~t~T~a~~G~F~~~~~~r~Efl~l 329 (337)
+++.|..++..+|.+.++ .=|+|.++. ..||...|-.++.+...-.+. |.. +++..+++...
T Consensus 14 ~~~~~~~~ls~~~a~~lgKpe~~vmV~~~~-~~~m~fgGs~~P~a~~~v~si-g~~--~~~~n~~~s~~ 78 (114)
T 3djh_A 14 VPDGFLSELTQQLAQATGKPPQYIAVHVVP-DQLMAFGGSSEPCALCSLHSI-GKI--GGAQNRSYSKL 78 (114)
T ss_dssp SCTTHHHHHHHHHHHHHCCCGGGCEEEEEC-SCEEEETTBCSSCEEEEEEES-SCC--SHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHCCCHHHeEEEEeC-CceEEEcCcCCCEEEEEEEEc-cCC--CHHHHHHHHHH
Confidence 457788888888888774 568888884 458999998887766555554 443 44555444443
No 12
>3v9o_A Dihydroneopterin aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: GUN; 1.45A {Burkholderia thailandensis}
Probab=31.73 E-value=72 Score=26.56 Aligned_cols=43 Identities=12% Similarity=0.105 Sum_probs=29.5
Q ss_pred chhhHHHHH-Hh-cCcchHHHHHHHHHHHHHhccCCCeeEEEEEe
Q 019706 12 SKFSRVAEV-FS-KRLQNPQRLADEVCSALQHGIKPAGVAVILQC 54 (337)
Q Consensus 12 SKlaRvv~~-~A-rRlQ~QERLt~qIa~al~~~l~p~GVaV~iea 54 (337)
..+.+.|.- +. .+.++.|.|+.+||+.|.+.-+...|-|.|+=
T Consensus 76 ~~v~~~I~~~v~~~~~~LlE~lAe~Ia~~il~~~~v~~v~V~V~K 120 (143)
T 3v9o_A 76 DLMKQSVAQCVARGHIHLQETLCDAIAASLLAHDAVRAVRVSTEK 120 (143)
T ss_dssp HHHHHHHHHHHHTCCCCSHHHHHHHHHHHHHSSTTCCEEEEEEEE
T ss_pred HHHHHHHHHHHhcCCcchHHHHHHHHHHHHHhcCCccEEEEEEEC
Confidence 345554443 33 47999999999999999986444555555543
No 13
>3r2e_A Dihydroneopterin aldolase; structural genomics, IDP90567, center for structural genomic infectious diseases, csgid, bifunctional; 2.15A {Yersinia pestis}
Probab=31.43 E-value=54 Score=27.47 Aligned_cols=46 Identities=17% Similarity=0.218 Sum_probs=32.9
Q ss_pred chhhHHH-HHHh-cCcchHHHHHHHHHHHHHhccCCCeeEEEEEeeec
Q 019706 12 SKFSRVA-EVFS-KRLQNPQRLADEVCSALQHGIKPAGVAVILQCSHL 57 (337)
Q Consensus 12 SKlaRvv-~~~A-rRlQ~QERLt~qIa~al~~~l~p~GVaV~iea~H~ 57 (337)
+.+.+.| +.+. .+.++.|.|+..||+.|.+.-....|-|.|+=-+.
T Consensus 78 ~~v~~~I~~~v~~~~f~LlE~LAe~Ia~~ll~~~~v~~v~V~V~KP~a 125 (143)
T 3r2e_A 78 ADISEAVIQHVGSQRFALVERVAEEVAELLLRRFNSPWVRIKVSKPGA 125 (143)
T ss_dssp HHHHHHHHHHHHSSEESCHHHHHHHHHHHHHHHHCCSEEEEEEECTTS
T ss_pred HHHHHHHHHHHhcCCcccHHHHHHHHHHHHHHhCCccEEEEEEECCCC
Confidence 3444544 3444 67899999999999999988766777777764333
No 14
>3kan_A D-dopachrome tautomerase; immune response, cytokine, cytokine-inhibitor C; HET: RW1; 1.13A {Homo sapiens} SCOP: d.80.1.3 PDB: 1dpt_A* 3ker_A*
Probab=29.92 E-value=78 Score=25.06 Aligned_cols=51 Identities=22% Similarity=0.312 Sum_probs=37.2
Q ss_pred hHHHHHHHHHHHHHhHcC---CCeEEEEEeeeeceeecccccCCceEEEeeeeeee
Q 019706 264 VQERLNRQIAETVSSLLG---GDVIVVVEASHTCMIARGIEKFGSSTATIAVLGRF 316 (337)
Q Consensus 264 lQERLT~qIA~aL~~~l~---~GVaV~i~A~H~Cm~~RGv~~~~s~t~T~a~~G~F 316 (337)
+++.|..++..+|.+.++ .-|+|.++. -.||...|-..+.+...-.+. |..
T Consensus 14 ~~~~l~~~ls~~~a~~lgKpe~~vmV~v~~-~~~m~fgGs~~P~a~~~v~si-G~~ 67 (117)
T 3kan_A 14 VPAGLEKRLCAAAASILGKPADRVNVTVRP-GLAMALSGSTEPCAQLSISSI-GVV 67 (117)
T ss_dssp SCTTHHHHHHHHHHHHHTCCGGGCEEEEEC-SCCCCBTTBCSSCEEEEEEEE-SSS
T ss_pred chHHHHHHHHHHHHHHHCCChHHEEEEEeC-CCeEEECCCCCceEEEEEEEe-cCC
Confidence 346688888888888773 578898884 568889998887776655554 554
No 15
>4aey_A D-erythro-7,8-dihydroneopterin triphosphate epime; isomerase, pteridine biosynthesis; 3.00A {Pseudomonas aeruginosa}
Probab=29.14 E-value=74 Score=27.12 Aligned_cols=44 Identities=11% Similarity=0.175 Sum_probs=31.5
Q ss_pred hhhH-HHHHHh-cCcchHHHHHHHHHHHHHhccCCCeeEEEEEeee
Q 019706 13 KFSR-VAEVFS-KRLQNPQRLADEVCSALQHGIKPAGVAVILQCSH 56 (337)
Q Consensus 13 KlaR-vv~~~A-rRlQ~QERLt~qIa~al~~~l~p~GVaV~iea~H 56 (337)
.+.+ |.+.+. .+.++.|.|+.+||+.+.+.-+...|-|.|+=-+
T Consensus 95 ~v~~~I~~~v~~~~f~LIEtLAe~Ia~~ll~~~~v~~V~V~V~KP~ 140 (156)
T 4aey_A 95 TITKAIIRHVEENRFALLERMTQEILDLVMENPAVRYAEVEVDKPH 140 (156)
T ss_dssp HHHHHHHHHHHTSEESCHHHHHHHHHHHHHHSCCCSEEEEEEEEET
T ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHHHhcCCccEEEEEEECCC
Confidence 4455 444444 6789999999999999987666667777766433
No 16
>4f8b_A NADPH-dependent 7-cyano-7-deazaguanine reductase; beta barrel, protein thioimide complex, pterin binding fold, fold; HET: GD1 PE4; 2.50A {Bacillus subtilis subsp} PDB: 4fgc_A*
Probab=28.55 E-value=82 Score=27.45 Aligned_cols=50 Identities=8% Similarity=-0.015 Sum_probs=45.5
Q ss_pred CCCeEEecchhhHHHHHHhcCcchHHHHHHHHHHHHHhccCCCeeEEEEE
Q 019706 4 LVNEFWDLSKFSRVAEVFSKRLQNPQRLADEVCSALQHGIKPAGVAVILQ 53 (337)
Q Consensus 4 ~~g~V~GLSKlaRvv~~~ArRlQ~QERLt~qIa~al~~~l~p~GVaV~ie 53 (337)
|+++++-+-.|-+-+.-|--+---+|..+.+|.+-|.+.++|+-+.|...
T Consensus 73 P~~~~vE~kSLKlYL~SFRnh~~FHE~cvn~I~~DL~~~~~P~~L~V~a~ 122 (165)
T 4f8b_A 73 PDEKMVESKSLKLYLFSFRNHGDFHEDCMNIIMNDLIELMDPRYIEVWGK 122 (165)
T ss_dssp CSSEEECHHHHHHHHHTTTTCBCCHHHHHHHHHHHHHHHHCCSEEEEEEE
T ss_pred eCCccCcHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHhhCCcEEEEEEE
Confidence 67888888999999999999999999999999999999999998888765
No 17
>2o90_A DHNA, dihydroneopterin aldolase; monapterin, drug design, atomic resolution, X-RAY crystallography, lyase; HET: NEU; 1.07A {Escherichia coli} PDB: 2o9m_A*
Probab=27.65 E-value=83 Score=25.21 Aligned_cols=43 Identities=19% Similarity=0.214 Sum_probs=30.3
Q ss_pred hhhHHH-HHHh-cCcchHHHHHHHHHHHHHhccCCCeeEEEEEee
Q 019706 13 KFSRVA-EVFS-KRLQNPQRLADEVCSALQHGIKPAGVAVILQCS 55 (337)
Q Consensus 13 KlaRvv-~~~A-rRlQ~QERLt~qIa~al~~~l~p~GVaV~iea~ 55 (337)
.+.+.+ +.+. .+.++.|.|+..||+.|.+.-....|-|.|.=-
T Consensus 55 ~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~~~v~~v~V~v~Kp 99 (122)
T 2o90_A 55 DIAETVVSHVEGARFALVERVAEEVAELLLARFNSPWVRIKLSKP 99 (122)
T ss_dssp HHHHHHHHHHTTCEESCHHHHHHHHHHHHHHHSSCSCEEEEEECT
T ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHHhhCCceEEEEEEECC
Confidence 344444 3333 467999999999999999876666666666533
No 18
>3r2e_A Dihydroneopterin aldolase; structural genomics, IDP90567, center for structural genomic infectious diseases, csgid, bifunctional; 2.15A {Yersinia pestis}
Probab=26.20 E-value=75 Score=26.59 Aligned_cols=87 Identities=13% Similarity=0.033 Sum_probs=54.6
Q ss_pred CCCCceEEEecceeeecccccccc--------eeeEEEEEEEe------CCCCccccchhHHHHHHHHh--cchhhHHHH
Q 019706 205 RSNEHIHSELNLSFWSQCEHHLLP--------FHGVVHIGYFC------AEGLNPIGKSLLQSIVHFYG--FKLQVQERL 268 (337)
Q Consensus 205 ~~~~~mViv~~I~f~S~CEHHLLP--------f~G~~hVaYiP------~~~~~viGLSKl~RlV~~~A--rRlQlQERL 268 (337)
.+..+.|.++|+.|+.. |=.+| |.=.+.+.|=. +.-...+--+.+.+.|.-+. .+.++.|.|
T Consensus 22 ~~~mD~I~I~~L~~~a~--iGv~~~Er~~~Q~~~vdl~l~~d~~~A~~sDdl~~tvdY~~v~~~I~~~v~~~~f~LlE~L 99 (143)
T 3r2e_A 22 SNAMDIVFIEELSVITT--IGVYDWEQTIQQKLVFDIEMGWDNRKAAGSDDVNDCLSYADISEAVIQHVGSQRFALVERV 99 (143)
T ss_dssp --CCEEEEEEEEEEEEE--ECSSHHHHTSEEEEEEEEEEEECHHHHHTCCCTTSSCCHHHHHHHHHHHHHSSEESCHHHH
T ss_pred hcCCCEEEECceEEEEE--ECCCHHHcccCceEEEEEEEEEcchhcccccccccccCHHHHHHHHHHHHhcCCcccHHHH
Confidence 33457799999999974 44443 44455666521 11112234455665555543 578999999
Q ss_pred HHHHHHHHHhHcC-CCeEEEEEeeee
Q 019706 269 NRQIAETVSSLLG-GDVIVVVEASHT 293 (337)
Q Consensus 269 T~qIA~aL~~~l~-~GVaV~i~A~H~ 293 (337)
+.+||+.|.+..+ ..|-|.|.=-+.
T Consensus 100 Ae~Ia~~ll~~~~v~~v~V~V~KP~a 125 (143)
T 3r2e_A 100 AEEVAELLLRRFNSPWVRIKVSKPGA 125 (143)
T ss_dssp HHHHHHHHHHHHCCSEEEEEEECTTS
T ss_pred HHHHHHHHHHhCCccEEEEEEECCCC
Confidence 9999999987666 667777764443
No 19
>3o1k_A Dihydroneopterin aldolase FOLB, putative; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Vibrio cholerae o1 biovar el tor}
Probab=25.78 E-value=80 Score=25.85 Aligned_cols=44 Identities=16% Similarity=0.143 Sum_probs=32.0
Q ss_pred hhhHHHH-HHh-cCcchHHHHHHHHHHHHHhccCCCeeEEEEEeee
Q 019706 13 KFSRVAE-VFS-KRLQNPQRLADEVCSALQHGIKPAGVAVILQCSH 56 (337)
Q Consensus 13 KlaRvv~-~~A-rRlQ~QERLt~qIa~al~~~l~p~GVaV~iea~H 56 (337)
.+.+.+. .+. .+.++.|.|+.+||+.|.+.-....|-|.|+=-+
T Consensus 70 ~v~~~I~~~v~~~~~~LiE~lA~~Ia~~ll~~~~v~~v~V~V~KP~ 115 (132)
T 3o1k_A 70 QVSQAVLEHIEQGRFLLVERVAEEVAELIMTRFAVPWLRIRLTKPG 115 (132)
T ss_dssp HHHHHHHHHHHTCEESCHHHHHHHHHHHHHHHHCCSEEEEEEEETT
T ss_pred HHHHHHHHHHhcCCcccHHHHHHHHHHHHHHhCCccEEEEEEECCC
Confidence 3444443 333 4789999999999999998876677777776544
No 20
>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*
Probab=25.68 E-value=1.1e+02 Score=24.25 Aligned_cols=32 Identities=9% Similarity=0.077 Sum_probs=24.2
Q ss_pred hcCcchHHHHHHHHHHHHHhcc-CCCeeEEEEEe
Q 019706 22 SKRLQNPQRLADEVCSALQHGI-KPAGVAVILQC 54 (337)
Q Consensus 22 ArRlQ~QERLt~qIa~al~~~l-~p~GVaV~iea 54 (337)
..+.++.|.|+.+||+.|.+ - +...|-|.++=
T Consensus 67 ~~~~~LiE~lA~~Ia~~~l~-~~~v~~v~V~v~K 99 (119)
T 1nbu_A 67 GPPRKLIETVGAEIADHVMD-DQRVHAVEVAVHK 99 (119)
T ss_dssp SSCCSCHHHHHHHHHHHHHT-STTCCEEEEEEEC
T ss_pred cCCcccHHHHHHHHHHHHhc-CCCccEEEEEEEC
Confidence 45679999999999999998 4 33556666553
No 21
>2q2k_A Hypothetical protein; protein-DNA, partition, segregation, PARB, DNA binding protein/DNA complex; HET: DNA 5IU EPE; 3.00A {Staphylococcus aureus}
Probab=25.35 E-value=47 Score=24.22 Aligned_cols=21 Identities=19% Similarity=0.445 Sum_probs=15.2
Q ss_pred cchHHHHHHHHHHHHHhCCCC
Q 019706 138 SANQGMVAAVVSILRSLGEDP 158 (337)
Q Consensus 138 ~~~~~~e~avr~lL~alGeDp 158 (337)
...+-+.+|.|..++.+||+|
T Consensus 50 tktahirealrryieeigenp 70 (70)
T 2q2k_A 50 TKTAHIREALRRYIEEIGENP 70 (70)
T ss_dssp CHHHHHHHHHHHHHHHCC---
T ss_pred cchHHHHHHHHHHHHHhccCC
Confidence 344569999999999999986
No 22
>2o90_A DHNA, dihydroneopterin aldolase; monapterin, drug design, atomic resolution, X-RAY crystallography, lyase; HET: NEU; 1.07A {Escherichia coli} PDB: 2o9m_A*
Probab=22.89 E-value=1.3e+02 Score=24.00 Aligned_cols=82 Identities=11% Similarity=0.024 Sum_probs=47.7
Q ss_pred eEEEecceeeeccccccc--------ceeeEEEEEEEeCC------CCccccchhHHHHHHHH-h-cchhhHHHHHHHHH
Q 019706 210 IHSELNLSFWSQCEHHLL--------PFHGVVHIGYFCAE------GLNPIGKSLLQSIVHFY-G-FKLQVQERLNRQIA 273 (337)
Q Consensus 210 mViv~~I~f~S~CEHHLL--------Pf~G~~hVaYiP~~------~~~viGLSKl~RlV~~~-A-rRlQlQERLT~qIA 273 (337)
-|.++|+.|+.. |=.+ ||.=.+.+.|=... -...+--+.+.+.+.-+ . .+.++.|.|+..||
T Consensus 3 ~I~i~~l~~~~~--iGv~~~Er~~~Q~~~vdl~l~~d~~~a~~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia 80 (122)
T 2o90_A 3 IVFIEQLSVITT--IGVYDWEQTIEQKLVFDIEMAWDNRKAAKSDDVADCLSYADIAETVVSHVEGARFALVERVAEEVA 80 (122)
T ss_dssp EEEEEEEEEEEE--ECSSGGGGGSCEEEEEEEEEEECTHHHHHHCCGGGSCCHHHHHHHHHHHHTTCEESCHHHHHHHHH
T ss_pred EEEECCEEEEEE--ecCCHHHhcCCcEEEEEEEEEEcchhcccccccccccCHHHHHHHHHHHHhcCCcchHHHHHHHHH
Confidence 356677776643 3333 34445566552110 00113344455555443 3 46799999999999
Q ss_pred HHHHhHcC-CCeEEEEEeeee
Q 019706 274 ETVSSLLG-GDVIVVVEASHT 293 (337)
Q Consensus 274 ~aL~~~l~-~GVaV~i~A~H~ 293 (337)
+.|.+..+ ..|-|.|.=-+-
T Consensus 81 ~~~l~~~~v~~v~V~v~Kp~a 101 (122)
T 2o90_A 81 ELLLARFNSPWVRIKLSKPGA 101 (122)
T ss_dssp HHHHHHSSCSCEEEEEECTTS
T ss_pred HHHHhhCCceEEEEEEECCCC
Confidence 99987655 667777764443
No 23
>1b9l_A Protein (epimerase); isomerase; 2.90A {Escherichia coli} SCOP: d.96.1.3
Probab=22.88 E-value=1.2e+02 Score=24.16 Aligned_cols=43 Identities=9% Similarity=0.049 Sum_probs=28.1
Q ss_pred hhhHHH-HHHh-cCcchHHHHHHHHHHHHHhccCCCeeEEEEEee
Q 019706 13 KFSRVA-EVFS-KRLQNPQRLADEVCSALQHGIKPAGVAVILQCS 55 (337)
Q Consensus 13 KlaRvv-~~~A-rRlQ~QERLt~qIa~al~~~l~p~GVaV~iea~ 55 (337)
.+.+.+ +.+. .+.++.|.|+..||+.+.+.-....|-|.|.=-
T Consensus 59 ~v~~~i~~~v~~~~~~LiE~lA~~Ia~~~l~~~~v~~v~V~v~Kp 103 (120)
T 1b9l_A 59 TVTKNIIQHVENNRFSLLEKLTQDVLDIAREHHWVTYAEVEIDKL 103 (120)
T ss_dssp HHHHHHHHHHHTSEESCHHHHHHHHHHHHTCSTTCSEEEEEEEEE
T ss_pred HHHHHHHHHHhcCCcchHHHHHHHHHHHHhccCCceEEEEEEECC
Confidence 344444 3333 467999999999999998653334555655433
No 24
>1sql_A Dihydroneopterin aldolase; tetrahydrofolate biosynthesis, aldolase classes, retroaldol reaction, purin binding, schiff base, lyase; HET: GUN; 2.20A {Arabidopsis thaliana} SCOP: d.96.1.3
Probab=21.22 E-value=1.4e+02 Score=24.95 Aligned_cols=37 Identities=14% Similarity=0.078 Sum_probs=28.7
Q ss_pred hcCcchHHHHHHHHHHHHHhcc-CCCeeEEEEEeeecc
Q 019706 22 SKRLQNPQRLADEVCSALQHGI-KPAGVAVILQCSHLH 58 (337)
Q Consensus 22 ArRlQ~QERLt~qIa~al~~~l-~p~GVaV~iea~H~C 58 (337)
..+.++.|.|+.+||+.|.+.- ....|-|.|.=-+--
T Consensus 86 ~~~f~LiE~lA~~Ia~~il~~fp~v~~v~V~V~Kp~a~ 123 (146)
T 1sql_A 86 GSPRNLLETVAELIASKTLEKFHQINAVRVKLSKPNVA 123 (146)
T ss_dssp SSCCSCHHHHHHHHHHHHHHHCTTCCEEEEEEEESSCT
T ss_pred cCCcchHHHHHHHHHHHHHHHCCCceEEEEEEECCcCC
Confidence 3467999999999999998875 556777777655554
No 25
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=21.15 E-value=46 Score=30.85 Aligned_cols=68 Identities=18% Similarity=0.219 Sum_probs=45.1
Q ss_pred cccccceeeEEEEEEEeCC-CCccccchhHHHHHHHHhc----------------chhhHHHHHHHHHHHHHhHcCCCeE
Q 019706 223 EHHLLPFHGVVHIGYFCAE-GLNPIGKSLLQSIVHFYGF----------------KLQVQERLNRQIAETVSSLLGGDVI 285 (337)
Q Consensus 223 EHHLLPf~G~~hVaYiP~~-~~~viGLSKl~RlV~~~Ar----------------RlQlQERLT~qIA~aL~~~l~~GVa 285 (337)
-|||.||.|....-.-|=. ++. |-...+.++++++.. -|...||.. +.+...+..+..|-
T Consensus 7 ~~~~~~~~Gv~~a~vTPf~~dg~-iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~--v~~~~~~~~~grvp 83 (301)
T 1xky_A 7 HHHMIDFGTIATAMVTPFDINGN-IDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVA--LYRHVVSVVDKRVP 83 (301)
T ss_dssp ---CCCCCSEEEECCCCBCTTSS-BCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHH--HHHHHHHHHTTSSC
T ss_pred cccccCCCceEEeeECcCCCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHH--HHHHHHHHhCCCce
Confidence 4899999998766666733 333 688999999999854 467788854 77777666654566
Q ss_pred EEEEeeee
Q 019706 286 VVVEASHT 293 (337)
Q Consensus 286 V~i~A~H~ 293 (337)
|++-.-..
T Consensus 84 ViaGvg~~ 91 (301)
T 1xky_A 84 VIAGTGSN 91 (301)
T ss_dssp EEEECCCS
T ss_pred EEeCCCCC
Confidence 66544443
No 26
>3o1k_A Dihydroneopterin aldolase FOLB, putative; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Vibrio cholerae o1 biovar el tor}
Probab=21.15 E-value=1.1e+02 Score=24.99 Aligned_cols=82 Identities=7% Similarity=-0.046 Sum_probs=51.2
Q ss_pred ceEEEecceeeecccccccc--------eeeEEEEEEEe------CCCCccccchhHHHHHHHHh--cchhhHHHHHHHH
Q 019706 209 HIHSELNLSFWSQCEHHLLP--------FHGVVHIGYFC------AEGLNPIGKSLLQSIVHFYG--FKLQVQERLNRQI 272 (337)
Q Consensus 209 ~mViv~~I~f~S~CEHHLLP--------f~G~~hVaYiP------~~~~~viGLSKl~RlV~~~A--rRlQlQERLT~qI 272 (337)
+-|.++|+.|+.. |=.+| |.=-+.+.|=. +.-...+--+.+.+.+.-+. .+.++.|.|+.+|
T Consensus 17 D~I~i~~L~~~a~--iGv~~~Er~~~Q~~~vdl~l~~d~~~a~~sDdl~~tvdY~~v~~~I~~~v~~~~~~LiE~lA~~I 94 (132)
T 3o1k_A 17 DKVFIEQLEVITT--IGVYDWEQQIKQKLVLDLEMAHDNRAAGKSDDVADALDYAQVSQAVLEHIEQGRFLLVERVAEEV 94 (132)
T ss_dssp CEEEEEEEEEEEE--ECSSTTGGGSCEEEEEEEEEECCCHHHHHHCCGGGSCCHHHHHHHHHHHHHTCEESCHHHHHHHH
T ss_pred cEEEECceEEEEE--EcCCHHHhccCceEEEEEEEEEcchhcccccccccccCHHHHHHHHHHHHhcCCcccHHHHHHHH
Confidence 5688999998874 44444 33344555511 00011233344555555543 4789999999999
Q ss_pred HHHHHhHcC-CCeEEEEEeee
Q 019706 273 AETVSSLLG-GDVIVVVEASH 292 (337)
Q Consensus 273 A~aL~~~l~-~GVaV~i~A~H 292 (337)
|+.|.+..+ ..|-|.|.=-+
T Consensus 95 a~~ll~~~~v~~v~V~V~KP~ 115 (132)
T 3o1k_A 95 AELIMTRFAVPWLRIRLTKPG 115 (132)
T ss_dssp HHHHHHHHCCSEEEEEEEETT
T ss_pred HHHHHHhCCccEEEEEEECCC
Confidence 999987666 67777776544
No 27
>3lq9_A DNA-damage-inducible transcript 4 protein; REDD1 DDIT4 MTOR, hypoxia, cancer, signaling protein; 2.00A {Homo sapiens}
Probab=20.51 E-value=35 Score=28.89 Aligned_cols=71 Identities=14% Similarity=0.132 Sum_probs=51.9
Q ss_pred chhhHHHHHHHHHHHHHhHc---C---CCeEE--EEEeeeeceeecccccCCceEEEeeeeeeecCChHHHHHHHHccC
Q 019706 261 KLQVQERLNRQIAETVSSLL---G---GDVIV--VVEASHTCMIARGIEKFGSSTATIAVLGRFSTDHSARAMFLQNIP 331 (337)
Q Consensus 261 RlQlQERLT~qIA~aL~~~l---~---~GVaV--~i~A~H~Cm~~RGv~~~~s~t~T~a~~G~F~~~~~~r~Efl~li~ 331 (337)
++-+.|.||++||..+-.+. | +|..+ .+|..-.|....-+.-..+.+.|....=+|+-|+..|.-|..++.
T Consensus 29 ~vLlP~~L~~rIa~dvLrls~~EPCGlRGc~i~v~vE~~~~c~~l~~I~~Dp~~vpTFEL~Lvlr~d~~~W~~l~~~f~ 107 (134)
T 3lq9_A 29 RLLMPSQLVSQVGKELLRLAYSEPCGLRGALLDVCVEQGKSCHSVGQLALDPSLVPTFQLTLVLRLDSRLWPKIQGLFS 107 (134)
T ss_dssp CEECCHHHHHHHHHHHHHHHTTSTTGGGGEEEEEEEEETTEEEEEEEEESCTTSCCCEEEEEEEECCTTCC-CCCCSCC
T ss_pred eEEChHHHHHHHHHHHHHHhcCCCCccceeEEEEEEecCccccccCcEeeCCCCCccEEEEEEEeeCCCCCHhHHHHHh
Confidence 45688999999999987542 3 67655 778777888777777667778888888888877776665544443
No 28
>4aey_A D-erythro-7,8-dihydroneopterin triphosphate epime; isomerase, pteridine biosynthesis; 3.00A {Pseudomonas aeruginosa}
Probab=20.30 E-value=1e+02 Score=26.18 Aligned_cols=83 Identities=14% Similarity=0.103 Sum_probs=50.8
Q ss_pred CceEEEecceeeecccccccc--------eeeEEEEEEEeCCC------CccccchhHHH-HHHHHh-cchhhHHHHHHH
Q 019706 208 EHIHSELNLSFWSQCEHHLLP--------FHGVVHIGYFCAEG------LNPIGKSLLQS-IVHFYG-FKLQVQERLNRQ 271 (337)
Q Consensus 208 ~~mViv~~I~f~S~CEHHLLP--------f~G~~hVaYiP~~~------~~viGLSKl~R-lV~~~A-rRlQlQERLT~q 271 (337)
.+.|.++|+.|+.. |=.+| |.=-+.+.|=..+. ...+--..+.+ |.++.. .+.++.|.|+.+
T Consensus 41 ~D~I~I~~L~~~a~--iGV~~~Er~~gQ~~~VDl~l~~d~~~A~~sDdL~dTvdY~~v~~~I~~~v~~~~f~LIEtLAe~ 118 (156)
T 4aey_A 41 MARIRVKDLRLRTF--IGIKEEEILNKQDVLINLTILYPAADAVEVNDIEHALNYRTITKAIIRHVEENRFALLERMTQE 118 (156)
T ss_dssp SSEEEEEEEEEEEE--ECSSHHHHHSCEEEEEEEEEECCC----------CCCHHHHHHHHHHHHHHTSEESCHHHHHHH
T ss_pred ccEEEEcceEEEEE--ECCCHHHhccCcEEEEEEEEEecchhccccCcchhccCHHHHHHHHHHHHhcCCcccHHHHHHH
Confidence 56799999999975 54444 33344555522110 11233344555 444444 678999999999
Q ss_pred HHHHHHhHcC-CCeEEEEEeee
Q 019706 272 IAETVSSLLG-GDVIVVVEASH 292 (337)
Q Consensus 272 IA~aL~~~l~-~GVaV~i~A~H 292 (337)
||+.+.+.-. ..|-|.|.=-+
T Consensus 119 Ia~~ll~~~~v~~V~V~V~KP~ 140 (156)
T 4aey_A 119 ILDLVMENPAVRYAEVEVDKPH 140 (156)
T ss_dssp HHHHHHHSCCCSEEEEEEEEET
T ss_pred HHHHHHhcCCccEEEEEEECCC
Confidence 9998875433 66777765433
No 29
>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*
Probab=20.24 E-value=1.3e+02 Score=23.91 Aligned_cols=77 Identities=19% Similarity=0.050 Sum_probs=44.1
Q ss_pred eEEEecceeeecccccccc--------eeeEEEEEEEeC------CCCccccchhHHHHHHH-H-hcchhhHHHHHHHHH
Q 019706 210 IHSELNLSFWSQCEHHLLP--------FHGVVHIGYFCA------EGLNPIGKSLLQSIVHF-Y-GFKLQVQERLNRQIA 273 (337)
Q Consensus 210 mViv~~I~f~S~CEHHLLP--------f~G~~hVaYiP~------~~~~viGLSKl~RlV~~-~-ArRlQlQERLT~qIA 273 (337)
-|.++|+.|+.. |=.+| |.=.+.+.|=.. +-...+--+.+.+.+.- . ..+.++.|.|+.+||
T Consensus 4 ~I~i~~l~~~~~--iGv~~~Er~~~Q~~~vdl~l~~d~~~a~~sDdl~~tvdY~~v~~~i~~~v~~~~~~LiE~lA~~Ia 81 (119)
T 1nbu_A 4 RIELRGLTVHGR--HGVYDHERVAGQRFVIDVTVWIDLAEAANSDDLADTYDYVRLASRAAEIVAGPPRKLIETVGAEIA 81 (119)
T ss_dssp EEEEEEEEEEEC--CCSSTTHHHHCEEEEEEEEEECCCHHHHHHCCGGGSCCHHHHHHHHHHHHHSSCCSCHHHHHHHHH
T ss_pred EEEECCeEEEEE--ECCCHHHhccCCEEEEEEEEEEcchhccccccchhccCHHHHHHHHHHHHhcCCcccHHHHHHHHH
Confidence 466777777764 43333 333455554211 00111223334444443 3 456799999999999
Q ss_pred HHHHhHcC--CCeEEEEE
Q 019706 274 ETVSSLLG--GDVIVVVE 289 (337)
Q Consensus 274 ~aL~~~l~--~GVaV~i~ 289 (337)
+.|.+ .+ ..|-|.+.
T Consensus 82 ~~~l~-~~~v~~v~V~v~ 98 (119)
T 1nbu_A 82 DHVMD-DQRVHAVEVAVH 98 (119)
T ss_dssp HHHHT-STTCCEEEEEEE
T ss_pred HHHhc-CCCccEEEEEEE
Confidence 99998 64 45666554
Done!