Query 019707
Match_columns 337
No_of_seqs 133 out of 1254
Neff 9.7
Searched_HMMs 29240
Date Mon Mar 25 05:55:24 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019707.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019707hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2d29_A Acyl-COA dehydrogenase; 100.0 2.2E-66 7.5E-71 479.2 38.7 336 1-336 47-386 (387)
2 1ukw_A Acyl-COA dehydrogenase; 100.0 1.6E-66 5.4E-71 478.8 36.0 334 1-335 45-378 (379)
3 2vig_A Short-chain specific ac 100.0 2.8E-66 9.4E-71 479.0 36.5 336 1-336 46-381 (391)
4 3pfd_A Acyl-COA dehydrogenase; 100.0 5.7E-67 1.9E-71 483.9 31.8 334 1-335 59-393 (393)
5 2jif_A Short/branched chain sp 100.0 4.2E-66 1.4E-70 479.2 36.2 336 1-337 69-404 (404)
6 3nf4_A Acyl-COA dehydrogenase; 100.0 4.3E-66 1.5E-70 477.4 36.2 332 1-335 56-387 (387)
7 1ivh_A Isovaleryl-COA dehydrog 100.0 2.9E-66 9.8E-71 479.4 34.6 337 1-337 55-393 (394)
8 1buc_A Butyryl-COA dehydrogena 100.0 5.2E-66 1.8E-70 476.2 36.2 335 1-335 45-383 (383)
9 3r7k_A Probable acyl COA dehyd 100.0 7.7E-66 2.6E-70 477.7 36.6 332 1-333 69-401 (403)
10 1egd_A Medium chain acyl-COA d 100.0 8.1E-66 2.8E-70 476.6 36.6 336 1-337 56-394 (396)
11 2dvl_A Acyl-COA dehydrogenase; 100.0 1E-65 3.5E-70 472.3 36.9 330 1-335 43-372 (372)
12 3p4t_A Putative acyl-COA dehyd 100.0 1.3E-65 4.3E-70 476.2 37.0 332 1-333 66-399 (403)
13 2pg0_A Acyl-COA dehydrogenase; 100.0 2.9E-65 1E-69 471.3 36.9 331 1-333 50-383 (385)
14 1rx0_A Acyl-COA dehydrogenase 100.0 6.4E-65 2.2E-69 470.0 36.7 334 1-336 59-393 (393)
15 1r2j_A Protein FKBI; polyketid 100.0 1.3E-65 4.4E-70 470.5 31.2 329 1-335 33-363 (366)
16 3ii9_A Glutaryl-COA dehydrogen 100.0 7.2E-66 2.5E-70 477.0 28.5 334 1-336 59-392 (396)
17 4hr3_A Putative acyl-COA dehyd 100.0 7.1E-65 2.4E-69 473.2 35.1 337 1-337 67-412 (415)
18 2eba_A Putative glutaryl-COA d 100.0 2.8E-64 9.6E-69 464.8 36.2 330 1-335 51-381 (385)
19 3sf6_A Glutaryl-COA dehydrogen 100.0 1.8E-64 6.3E-69 468.4 34.4 329 1-336 71-399 (403)
20 3swo_A Glutaryl-COA dehydrogen 100.0 3E-64 1E-68 466.6 35.0 329 1-336 66-394 (399)
21 2ix5_A Acyl-coenzyme A oxidase 100.0 8.6E-64 2.9E-68 467.1 36.6 331 1-336 95-425 (436)
22 3mpi_A Glutaryl-COA dehydrogen 100.0 1.2E-64 4E-69 469.3 30.4 331 1-333 46-382 (397)
23 3owa_A Acyl-COA dehydrogenase; 100.0 2.8E-63 9.7E-68 478.0 34.4 331 1-336 74-425 (597)
24 2z1q_A Acyl-COA dehydrogenase; 100.0 1.4E-62 4.6E-67 473.5 33.2 331 1-336 69-415 (577)
25 1siq_A GCD, glutaryl-COA dehyd 100.0 4.8E-62 1.6E-66 450.9 33.9 329 1-335 54-384 (392)
26 2uxw_A VERY-long-chain specifi 100.0 1.3E-61 4.3E-66 467.8 33.1 334 1-334 88-429 (607)
27 3mkh_A Nitroalkane oxidase; ox 100.0 7E-62 2.4E-66 456.1 30.0 334 1-336 54-417 (438)
28 2c12_A Nitroalkane oxidase; ox 100.0 5.2E-61 1.8E-65 450.2 33.7 334 1-335 52-419 (439)
29 2wbi_A Acyl-COA dehydrogenase 100.0 2E-61 6.8E-66 451.2 28.5 332 2-336 77-419 (428)
30 3mxl_A Nitrososynthase; flavin 100.0 1.2E-58 4E-63 429.1 25.2 325 1-335 48-393 (395)
31 2rfq_A 3-HSA hydroxylase, oxyg 100.0 8.7E-58 3E-62 423.0 27.1 320 1-336 44-387 (394)
32 2jbr_A P-hydroxyphenylacetate 100.0 6.2E-58 2.1E-62 427.2 24.9 320 1-336 72-415 (422)
33 2or0_A Hydroxylase; APC7385, r 100.0 7.5E-58 2.6E-62 425.8 24.6 320 1-336 57-402 (414)
34 3m9v_A FAD-dependent oxidoredu 100.0 5.1E-57 1.8E-61 423.2 29.5 326 1-336 59-405 (439)
35 3djl_A Protein AIDB; alpha hel 100.0 4.7E-53 1.6E-57 402.2 31.4 321 1-336 95-442 (541)
36 1w07_A Acyl-COA oxidase; oxido 100.0 6E-52 2E-56 404.2 25.4 325 3-336 68-441 (659)
37 2ddh_A Acyl-COA oxidase; beta 100.0 3E-50 1E-54 391.6 29.7 319 13-336 75-438 (661)
38 1u8v_A Gamma-aminobutyrate met 100.0 4E-40 1.4E-44 309.8 30.5 308 21-336 81-446 (490)
39 2yyk_A 4-hydroxyphenylacetate- 100.0 5.2E-40 1.8E-44 308.6 29.3 264 59-333 122-422 (481)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 3.4E-35 1.2E-39 275.6 28.8 239 57-303 127-393 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 100.0 4.5E-31 1.5E-35 248.1 29.1 244 61-311 134-400 (517)
42 3owa_A Acyl-COA dehydrogenase; 95.3 0.19 6.6E-06 48.1 12.8 108 227-336 482-592 (597)
43 2z1q_A Acyl-COA dehydrogenase; 85.5 23 0.00078 33.5 15.0 101 228-336 469-570 (577)
44 2uxw_A VERY-long-chain specifi 84.1 15 0.00051 35.1 13.0 70 227-296 506-576 (607)
No 1
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=2.2e-66 Score=479.20 Aligned_cols=336 Identities=40% Similarity=0.645 Sum_probs=320.1
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|..++...|..+++++||++|+|++.+|+.+++++
T Consensus 47 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 126 (387)
T 2d29_A 47 LAEFGVFGALVPEAYGGAGLSTRLFARMVEAIAYYDGALALTVASHNSLATGHILLAGSEAQKEAFLPKLASGEALGAWG 126 (387)
T ss_dssp HHTTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTSSSCEEEE
T ss_pred HHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEE
Confidence 46899999999999999999999999999999999999998888874467889999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCC----CCCCeEEEEEeCCCCCeeeccccc
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKA----GSKGITAFIIEKGMPGFSTAQKLD 156 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~----~~~~~~~flvp~~~~Gv~~~~~~~ 156 (337)
+|||+.|||...++|++++++|||+|||+|.|+||+..||+++|+++++++. +++++++|+||++.|||++.++|+
T Consensus 127 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~ 206 (387)
T 2d29_A 127 LTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPPSPERKHQGISAFAFFRPERGLKVGRKEE 206 (387)
T ss_dssp CCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSCCSCGGGTTTTEEEEEEECCSSSEEECCCCC
T ss_pred eCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCCEEEEEEEeCCccccCCCCCCeEEEEEeCCCCCeeccCccc
Confidence 9999999999999999999999999999999999999999999999986442 456899999999999999999999
Q ss_pred cccCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchH
Q 019707 157 KLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQF 236 (337)
Q Consensus 157 ~~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~ 236 (337)
++|+++++++++.||||+||++++|+.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.
T Consensus 207 ~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~ 286 (387)
T 2d29_A 207 KLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAVGLGQAALDYALAYAKGREAFGRPIAEFEG 286 (387)
T ss_dssp CSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHH
T ss_pred ccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCcchHhhHH
Confidence 99999999999999999999999999999999888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCc
Q 019707 237 IQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYE 316 (337)
Q Consensus 237 vq~~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~ 316 (337)
+|++|+++...++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...
T Consensus 287 vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~ 366 (387)
T 2d29_A 287 VSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVKACDEAIQILGGYGYVKDYPVERYWRDARLTR 366 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCChHHHHHHHhhCcc
Confidence 99999999999999999999999999987766778999999999999999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHHHHHHHhc
Q 019707 317 IGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 317 ~~~g~~~~~~~~l~~~~~~~ 336 (337)
+++|++++++..|++.++++
T Consensus 367 i~~G~~~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 367 IGEGTSEILKLVIARRLLEA 386 (387)
T ss_dssp TTTSCHHHHHHHHHHHHHHT
T ss_pred ccCCHHHHHHHHHHHHHhhc
Confidence 99999999999999999875
No 2
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.6e-66 Score=478.83 Aligned_cols=334 Identities=39% Similarity=0.602 Sum_probs=319.0
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+...++|++++.|+++++.+..|. .+...|..+|+++||++|+|++.+|+.+++++
T Consensus 45 l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 123 (379)
T 1ukw_A 45 LHEVGLLNAIIPEEYGGMGLKMLDEVIVGEELAYACMGIYTIPMASD-LGITPVLLAGTEEQKERFLRPLTEKPALAAFA 123 (379)
T ss_dssp HHHTTCTTTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCHHHHHHHHGGGTSSSCEEEEE
T ss_pred HHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceEEEE
Confidence 46899999999999999999999999999999999999998888885 88899999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|++++++|||+|||+|.|+||+..||+++|+++++++++.+++++|+||++.|||++.++|+++|+
T Consensus 124 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~~~G~ 203 (379)
T 1ukw_A 124 LSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATVNPELRHKGVVALVVERGTPGFKAIKIHGKMGQ 203 (379)
T ss_dssp CCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEEEEEEEEESCGGGGGGGEEEEEEETTCTTEEEEECCCCSSC
T ss_pred ecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCCEEEEEEEcCCCCCCCceEEEEEeCCCCCeEecCccccccC
Confidence 99999999999999999999999999999999999999999999999864444567899999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++||.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 204 ~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fg~~i~~~q~vq~~ 283 (379)
T 1ukw_A 204 RASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGVARRALDEARKYAKEREAFGEPIANFQAIQFK 283 (379)
T ss_dssp TTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHHH
T ss_pred CCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHHHHHH
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++...++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|
T Consensus 284 la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G 363 (379)
T 1ukw_A 284 LVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAANQAIQIHGGYGYVREFPVEKLLRDVKLNQIYEG 363 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHHGGGTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhCCeecCCCChHHHHHHHhcCceecCC
Confidence 99999999999999999999998776667889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHh
Q 019707 321 TSEIRRMIIGRALLK 335 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~ 335 (337)
++++++..|++.+++
T Consensus 364 t~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 364 TNEIQRLIIARHILA 378 (379)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhc
Confidence 999999999999885
No 3
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=2.8e-66 Score=478.99 Aligned_cols=336 Identities=41% Similarity=0.645 Sum_probs=320.0
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|...+...|..+|+++||++|+|++.+|+.+++++
T Consensus 46 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 125 (391)
T 2vig_A 46 MGGLGLLAMDVPEELGGAGLDYLAYAIAMEEISRGCASTGVIMSVNNSLYLGPILKFGSKEQKQAWVTPFTSGDKIGCFA 125 (391)
T ss_dssp HHHHTTTSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHCCHHHHHHHTGGGSSSSCCEEEE
T ss_pred HHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEE
Confidence 46899999999999999999999999999999999999998888874367889999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|+|++++|||+|||+|.|+||+..||+++|+++++++++++++++|+||++.|||++.++|+++|+
T Consensus 126 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~ 205 (391)
T 2vig_A 126 LSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRALQNKSISAFLVPMPTPGLTLGKKEDKLGI 205 (391)
T ss_dssp CCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECCSSSTTSCEEEEEEESSCTTEEECCCCCBSSC
T ss_pred ecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCCEEEEEEEeCCCCCCCceEEEEEeCCCCCeEecCccccccC
Confidence 99999999999999999999999999999999999999999999999865445568999999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++||.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 206 r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~ 285 (391)
T 2vig_A 206 RGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGIAQTALDCAVNYAENRMAFGAPLTKLQVIQFK 285 (391)
T ss_dssp TTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred CCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcchhhHHHHHH
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++...++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|
T Consensus 286 la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G 365 (391)
T 2vig_A 286 LADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQAIQILGGMGYVTEMPAERHYRDARITEIYEG 365 (391)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCCeEecCCChHHHHHHHhhcceeecC
Confidence 99999999999999999999998877667789999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhc
Q 019707 321 TSEIRRMIIGRALLKQ 336 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~~ 336 (337)
++++++..|++.++++
T Consensus 366 ~~~~~~~~ia~~~l~~ 381 (391)
T 2vig_A 366 TSEIQRLVIAGHLLRS 381 (391)
T ss_dssp CHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhh
Confidence 9999999999999875
No 4
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=5.7e-67 Score=483.90 Aligned_cols=334 Identities=37% Similarity=0.599 Sum_probs=318.0
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++++..|. .+...|..+++++||++|+|++.+|+.+++++
T Consensus 59 l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a 137 (393)
T 3pfd_A 59 LNSSGFSAIHVPEEYGGQGADSVATCIVIEEVARVDCSASLIPAVNK-LGTMGLILRGSEELKKQVLPAVASGEAMASYA 137 (393)
T ss_dssp HHHHTCSCTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HTTHHHHHHCCHHHHHHHHHHHHTTSCCEEEE
T ss_pred HHHCCCCCCCCChhHCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCceeEEE
Confidence 46889999999999999999999999999999999999999877776 77788999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|++++++|||+|||+|.|+||+..||+++|+++++++++.+++++|+||++.|||++.++|+++|+
T Consensus 138 ~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~ 217 (393)
T 3pfd_A 138 LSEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKSTWYTVMAVTDPDKGANGISAFMVHKDDEGFTVGPKERKLGI 217 (393)
T ss_dssp CCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGGGGGGGEEEEEEETTSTTEEEEEECCBSSC
T ss_pred EcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCcccCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCCCCcccC
Confidence 99999999999999999999999999999999999999999999999876555678999999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++||.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 218 ~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~ 297 (393)
T 3pfd_A 218 KGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGIAQGALDAAIAYTKERKQFGRPVSDNQGVQFM 297 (393)
T ss_dssp TTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred CCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHHHHH
Confidence 99999999999999999999999999999888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC-ChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKV-DPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGA 319 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~ 319 (337)
|+++...++++|++++++++.++.+.+ ....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++
T Consensus 298 la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~ 377 (393)
T 3pfd_A 298 LADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCFASDVAMEVTTDAVQLFGGYGYTQDFPVERMMRDAKITQIYE 377 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSSHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCChHHHHHHhhcceeeec
Confidence 999999999999999999999987765 5678899999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHh
Q 019707 320 GTSEIRRMIIGRALLK 335 (337)
Q Consensus 320 g~~~~~~~~l~~~~~~ 335 (337)
|++++++..|+|.++|
T Consensus 378 Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 378 GTNQIQRVVMSRALLR 393 (393)
T ss_dssp SCHHHHHHHHHHHHTC
T ss_pred CHHHHHHHHHHHHHhC
Confidence 9999999999999875
No 5
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=4.2e-66 Score=479.18 Aligned_cols=336 Identities=35% Similarity=0.594 Sum_probs=318.9
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+.+|..++...|..+|+++||++|+|++.+|. +++++
T Consensus 69 l~e~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~~~~g~-~~~~a 147 (404)
T 2jif_A 69 LFQQGLMGIEVDPEYGGTGASFLSTVLVIEELAKVDASVAVFCEIQNTLINTLIRKHGTEEQKATYLPQLTTEK-VGSFC 147 (404)
T ss_dssp HHHTTTTSSSSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHHTC-CEEEE
T ss_pred HHHCCCCccCCchhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCC-cceEE
Confidence 46899999999999999999999999999999999999999888876567788999999999999999999985 78999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|+|++++|||+|||+|.|+||+..||+++|+++++++++.+++++|+||++.|||++.+.|+.+|+
T Consensus 148 ~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v~ar~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~ 227 (404)
T 2jif_A 148 LSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTIGYKGITSFLVDRDTPGLHIGKPENKLGL 227 (404)
T ss_dssp CCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGGGGGGGEEEEEEETTCTTEEECCCCCBSSC
T ss_pred ecCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccCEEEEEEEeCCCCCCCceEEEEEecCCCCeEeccCcccccC
Confidence 99999999999999999999999999999999999999999999999865445567899999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++||.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 228 ~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~ 307 (404)
T 2jif_A 228 RASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGLAQGCFDYTIPYIKERIQFGKRLFDFQGLQHQ 307 (404)
T ss_dssp TTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred CCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccCCcccccHHHHHH
Confidence 99999999999999999999999999998888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++..+++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|
T Consensus 308 la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G 387 (404)
T 2jif_A 308 VAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSKCIEWMGGVGYTKDYPVEKYFRDAKIGTIYEG 387 (404)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHGGGGTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHHHHHHhcCcceecCCCcHHHHHhhccceeecCC
Confidence 99999999999999999999998877667789999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhcC
Q 019707 321 TSEIRRMIIGRALLKQQ 337 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~~~ 337 (337)
++++++..|++.+++++
T Consensus 388 t~ei~~~~ia~~~~~~~ 404 (404)
T 2jif_A 388 ASNIQLNTIAKHIDAEY 404 (404)
T ss_dssp CHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHhhcC
Confidence 99999999999998875
No 6
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=4.3e-66 Score=477.37 Aligned_cols=332 Identities=35% Similarity=0.613 Sum_probs=312.1
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|. .+...+..+++++||++|+|++.+|+.+++++
T Consensus 56 l~~~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 134 (387)
T 3nf4_A 56 LGAAGLLSLPQPEEWGGGGQPYEVYLQVLEEIAARWASVAVAVSVHS-LSSHPLLVFGTEEQKKRWLPGMLSGEQIGAYS 134 (387)
T ss_dssp HHTTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHTHHHHHHSCHHHHHHHHHHHTTSSCCEEEE
T ss_pred HHHCCCCCCCCCHhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHH-HHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEE
Confidence 46899999999999999999999999999999999999999888887 88889999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|+|++++|||+|||+|.|+||+..||+++|+++++ ++.+++++|+||++.|||++.+.|+.+|+
T Consensus 135 ~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~--~~~~g~~~flV~~~~pGv~~~~~~~~~G~ 212 (387)
T 3nf4_A 135 LSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADFYTLFARTG--EGSRGVSCFLVPADQPGLSFGKPEEKMGL 212 (387)
T ss_dssp CCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECC----CCCEEEEEEETTCTTEEECCCCCBSSC
T ss_pred EcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccCEEEEEEEeC--CCCCceEEEEEECCCCCeEecCccccccc
Confidence 9999999999999999999999999999999999999999999999986 35568999999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++||.++.|+......+...|+.+++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 213 ~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~v~~~ 292 (387)
T 3nf4_A 213 HAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGLAQAALDEAVAYANERTAFGRKIIDHQGLGFL 292 (387)
T ss_dssp CSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHC------CTTTC-CHHHH
T ss_pred CCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCCchhhhHHHHHH
Confidence 99999999999999999999999999999888899999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++...++++|++++.+++..+.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|
T Consensus 293 la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G 372 (387)
T 3nf4_A 293 LADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTATDAAMKVTTDAVQVFGGVGYTRDYRVERYMREAKIMQIFEG 372 (387)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcHhhcCCCcHHHHHhHhhcCeeecC
Confidence 99999999999999999999999887778889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHh
Q 019707 321 TSEIRRMIIGRALLK 335 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~ 335 (337)
++++++..|+|.++|
T Consensus 373 t~ei~~~~ia~~l~~ 387 (387)
T 3nf4_A 373 TNQIQRLVIARGLTR 387 (387)
T ss_dssp CHHHHHHHHHHTTC-
T ss_pred hHHHHHHHHHHHHhC
Confidence 999999999998865
No 7
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.9e-66 Score=479.36 Aligned_cols=337 Identities=69% Similarity=1.160 Sum_probs=320.7
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+.+|..++...|..+|+++||++|+|++.+|+.+++++
T Consensus 55 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~G~~~~~~a 134 (394)
T 1ivh_A 55 LGNLGVLGITAPVQYGGSGLGYLEHVLVMEEISRASGAVGLSYGAHSNLCINQLVRNGNEAQKEKYLPKLISGEYIGALA 134 (394)
T ss_dssp HHHHTCTTTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEEE
T ss_pred HHHCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhchhHHHHHHHhhHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 46889999999999999999999999999999999999999888875467889999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCC--CCCCCeEEEEEeCCCCCeeeccccccc
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIK--AGSKGITAFIIEKGMPGFSTAQKLDKL 158 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~--~~~~~~~~flvp~~~~Gv~~~~~~~~~ 158 (337)
+|||+.|||...++|++++++|||+|||+|.|+||+..||+++|+++++++ ++.+++++|+||++.|||++.+.|+++
T Consensus 135 ~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v~ar~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~~ 214 (394)
T 1ivh_A 135 MSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAAVPASRGITAFIVEKGMPGFSTSKKLDKL 214 (394)
T ss_dssp CCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCBS
T ss_pred ecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCCEEEEEEEeCCcccCCCCCeEEEEEeCCCCCeEeccccccc
Confidence 999999999999999999999999999999999999999999999998644 344678999999999999999999999
Q ss_pred cCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHH
Q 019707 159 GMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQ 238 (337)
Q Consensus 159 g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq 238 (337)
|+++++++++.||||+||++++||.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|
T Consensus 215 G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq 294 (394)
T 1ivh_A 215 GMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGLMQAVLDHTIPYLHVREAFGQKIGHFQLMQ 294 (394)
T ss_dssp SCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHH
T ss_pred cCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhccHHHH
Confidence 99999999999999999999999999999988888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCccc
Q 019707 239 GKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIG 318 (337)
Q Consensus 239 ~~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~ 318 (337)
++|+++...++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...++
T Consensus 295 ~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~ 374 (394)
T 1ivh_A 295 GKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALDGIQCFGGNGYINDFPMGRFLRDAKLYEIG 374 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSTHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCchHHHHHHhccccccc
Confidence 99999999999999999999999988776778899999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHhcC
Q 019707 319 AGTSEIRRMIIGRALLKQQ 337 (337)
Q Consensus 319 ~g~~~~~~~~l~~~~~~~~ 337 (337)
+|++++++..|++.+++++
T Consensus 375 ~Gt~~i~~~~ia~~ll~~~ 393 (394)
T 1ivh_A 375 AGTSEVRRLVIGRAFNADF 393 (394)
T ss_dssp TSCHHHHHHHHHHHHHTC-
T ss_pred CChHHHHHHHHHHHHHhhc
Confidence 9999999999999999874
No 8
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.2e-66 Score=476.17 Aligned_cols=335 Identities=41% Similarity=0.656 Sum_probs=319.5
Q ss_pred CccccccCCCCCccCCCCC---CCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCccee
Q 019707 1 MGNFNLHGITAPQEYGGLG---LGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVG 77 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~---~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~ 77 (337)
|++.||+++.+|++|||.| +++.+.+.++|++++.|+++++.+..|..++...|..+|+++||++|+|++.+|+.++
T Consensus 45 l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~ 124 (383)
T 1buc_A 45 LLSLGITGAYFEEKYGGSGDDGGDVLSYILAVEELAKYDAGVAITLSATVSLCANPIWQFGTEAQKEKFLVPLVEGTKLG 124 (383)
T ss_dssp HHTTSGGGTTSCGGGTCGGGGTCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHTHHHHHHHCCHHHHHHTHHHHHHTSSCE
T ss_pred HHHCCCCCCCCChhhCCCCCCCCCHHHHHHHHHHHHhhChHHHHHHHhhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeE
Confidence 4689999999999999999 9999999999999999999999888885477889999999999999999999999999
Q ss_pred EEEecCCCCCCCcCCcEeEEEEe-CCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccc
Q 019707 78 ALAMSEPNAGSDVVGMKCKADRV-DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLD 156 (337)
Q Consensus 78 ~~~~te~~~gs~~~~~~~~a~~~-~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~ 156 (337)
++++|||+.|||...++|+|+++ +|||+|||+|.|+||+..||+++|+++++++++++++++|+||++.|||++.++|+
T Consensus 125 ~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~Gv~v~~~~~ 204 (383)
T 1buc_A 125 AFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKSKGNHGITAFILEDGTPGFTYGKKED 204 (383)
T ss_dssp EEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCSEEEEEEESCSSSSTTSEEEEEEETTCTTEEEEEECC
T ss_pred EEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCCEEEEEEEeCCCCCCCceEEEEEECCCCCeEecCccc
Confidence 99999999999999999999999 99999999999999999999999999987554567899999999999999999999
Q ss_pred cccCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchH
Q 019707 157 KLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQF 236 (337)
Q Consensus 157 ~~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~ 236 (337)
++|+++++++++.||||+||++++|+.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.
T Consensus 205 ~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~~~~ya~~R~~fG~~i~~~q~ 284 (383)
T 1buc_A 205 KMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALGIAEAALADAVEYSKQRVQFGKPLCKFQS 284 (383)
T ss_dssp CSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHH
T ss_pred cccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhhHH
Confidence 99999999999999999999999999999999888888889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCc
Q 019707 237 IQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYE 316 (337)
Q Consensus 237 vq~~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~ 316 (337)
+|++|+++...++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...
T Consensus 285 vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~ 364 (383)
T 1buc_A 285 ISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAMRVTTEAVQIFGGYGYSEEYPVARHMRDAKITQ 364 (383)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCCeecCCCChHHHHHHHhhccc
Confidence 99999999999999999999999999877667788999999999999999999999999999999999999999999999
Q ss_pred ccCChHHHHHHHHHHHHHh
Q 019707 317 IGAGTSEIRRMIIGRALLK 335 (337)
Q Consensus 317 ~~~g~~~~~~~~l~~~~~~ 335 (337)
+++|++++++..|++.+++
T Consensus 365 i~~Gt~~i~~~~ia~~~l~ 383 (383)
T 1buc_A 365 IYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp TTTSCHHHHHHHHHHHHTC
T ss_pred ccCCHHHHHHHHHHHHHhC
Confidence 9999999999999999874
No 9
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=7.7e-66 Score=477.66 Aligned_cols=332 Identities=30% Similarity=0.485 Sum_probs=318.2
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhc-cCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRA-SGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGAL 79 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~-~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~ 79 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++. ++++++.+..|..++...|..+|+++||++|+|++.+|+.++++
T Consensus 69 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~ 148 (403)
T 3r7k_A 69 AAEVGLLGIGFPEEVGGSGGNAIDSALVTEAILAAGGSTGVCAALFTHGIALPHIAANGSDALIERYVRPTLAGKMIGSL 148 (403)
T ss_dssp HHHHTCTTBTSCGGGTCCBCCHHHHHHHHHHHHHTTCCHHHHHHHCTHHHHSHHHHHHCCHHHHHHHHHHHHTTSCCEEE
T ss_pred HHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHhcCCchHHHHHHHHhhHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEE
Confidence 46889999999999999999999999999999998 89998877655447888999999999999999999999999999
Q ss_pred EecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeecccccccc
Q 019707 80 AMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLG 159 (337)
Q Consensus 80 ~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g 159 (337)
++|||+.|||...++|++++++|||+|||+|.|+|++..||+++|+++++++ +++++++|+||++.|||++.++|+++|
T Consensus 149 a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~G 227 (403)
T 3r7k_A 149 GVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGP-GYGGVSLLVIDKNSPGFEVSRRLDKMG 227 (403)
T ss_dssp ECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECSSS-SGGGEEEEEEETTCTTEEEEEECCBSS
T ss_pred EecCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCCEEEEEEEcCCC-CCCceEEEEEeCCCCCeEecCcccccC
Confidence 9999999999999999999999999999999999999999999999998764 566899999999999999999999999
Q ss_pred CCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHH
Q 019707 160 MRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQG 239 (337)
Q Consensus 160 ~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~ 239 (337)
++++++++|.||||+||++++|+.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|+
T Consensus 228 ~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~ 307 (403)
T 3r7k_A 228 WRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYATAGRALDLAKSWARERETFGRPLTGRQIIRH 307 (403)
T ss_dssp CTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHH
T ss_pred CCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCccCCCchhhcHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccC
Q 019707 240 KTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGA 319 (337)
Q Consensus 240 ~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~ 319 (337)
+|+++..+++++|++++++++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++.+.+++
T Consensus 308 ~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~ 387 (403)
T 3r7k_A 308 KLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNEAVQIFGGMGYMRESEIERHYRDCRILGIGG 387 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEecCCchHHHHHHHhCcceeec
Confidence 99999999999999999999999988777888999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHH
Q 019707 320 GTSEIRRMIIGRAL 333 (337)
Q Consensus 320 g~~~~~~~~l~~~~ 333 (337)
|++++++..|+|.+
T Consensus 388 Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 388 GTNEIMNEVIAKRI 401 (403)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999999876
No 10
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=8.1e-66 Score=476.64 Aligned_cols=336 Identities=36% Similarity=0.553 Sum_probs=318.3
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+ .|..++...|..+++++||++|||++.+|+.+++++
T Consensus 56 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~-~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 134 (396)
T 1egd_A 56 AWELGLMNTHIPENCGGLGLGTFDACLISEELAYGCTGVQTAI-EGNSLGQMPIIIAGNDQQKKKYLGRMTEEPLMCAYC 134 (396)
T ss_dssp HHHHTCSSTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHH-HHHHHHTHHHHHHCCHHHHHHHHHHHHHSCCCEEEE
T ss_pred HHHCCCCCCCCchhhCCCCCCHHHHHHHHHHHHhhCccHHHHH-HhhhHHHHHHHHhCCHHHHHHHHHHHhCCCceEEEE
Confidence 4688999999999999999999999999999999999999877 665466667889999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCC---CCeEEEEEeCCCCCeeecccccc
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS---KGITAFIIEKGMPGFSTAQKLDK 157 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~---~~~~~flvp~~~~Gv~~~~~~~~ 157 (337)
+|||+.|||...++|+|++++|||+|||+|.|+||+..||+++|+++++++++. +++++|+||++.|||++.++|++
T Consensus 135 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~ 214 (396)
T 1egd_A 135 VTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDPKAPANKAFTGFIVEADTPGIQIGRKELN 214 (396)
T ss_dssp CCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECCCCTTSCGGGTEEEEEEETTCTTEEECCCCCB
T ss_pred ecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccCEEEEEEEeCCCCCCCCCCCeEEEEEeCCCCCeeeCCcccc
Confidence 999999999999999999999999999999999999999999999998754333 57899999999999999999999
Q ss_pred ccCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHH
Q 019707 158 LGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFI 237 (337)
Q Consensus 158 ~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~v 237 (337)
+|+++++++++.||||+||++++||.++.|+......+...|+..++.++|+++.+++.+++|+++|.+||+|+.++|.+
T Consensus 215 ~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~v 294 (396)
T 1egd_A 215 MGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVAAGAVGLAQRALDEATKYALERKTFGKLLVEHQAI 294 (396)
T ss_dssp SSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHH
T ss_pred ccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCcchhhhHHH
Confidence 99999999999999999999999999999998888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcc
Q 019707 238 QGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEI 317 (337)
Q Consensus 238 q~~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~ 317 (337)
|++|+++...++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+
T Consensus 295 q~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i 374 (396)
T 1egd_A 295 SFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATDAVQILGGNGFNTEYPVEKLMRDAKIYQI 374 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGTTBTTSSHHHHHHHHGGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCcccccCCChHHHHHHHhhCeee
Confidence 99999999999999999999999999877677789999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHHHhcC
Q 019707 318 GAGTSEIRRMIIGRALLKQQ 337 (337)
Q Consensus 318 ~~g~~~~~~~~l~~~~~~~~ 337 (337)
++|++++++..|++.+++++
T Consensus 375 ~~Gt~~i~~~~ia~~~l~~~ 394 (396)
T 1egd_A 375 YGGTSQIQRLIVAREHIDKY 394 (396)
T ss_dssp TTSCHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHHhhc
Confidence 99999999999999999864
No 11
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1e-65 Score=472.28 Aligned_cols=330 Identities=41% Similarity=0.675 Sum_probs=316.4
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|..++...|..+|+++||++|+|++.+|+.+++++
T Consensus 43 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 122 (372)
T 2dvl_A 43 LAELGLLGMTTPEEWGGVGLDSVTWALALEELAAADPSVAVIVSVTSGLPQYMLLRFGSEAQKRRYLVPLARGEWIGAFC 122 (372)
T ss_dssp HHHTTGGGTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTSHHHHHHHHHCCHHHHHHTHHHHHTTSSCEEEE
T ss_pred HHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhcCcHHHHHHHHhhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 46899999999999999999999999999999999999998888884377888999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|++++++|||+|||+|.|+||+..||+++|++++++ ++++|+||++.|||++.+.|+++|+
T Consensus 123 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~-----g~~~flV~~~~pGv~v~~~~~~~G~ 197 (372)
T 2dvl_A 123 LTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMARTEK-----GISAFLVEKGTPGLSFGRPEEKMGL 197 (372)
T ss_dssp CCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETT-----EEEEEEEETTCTTEEECCCCCCSSC
T ss_pred ecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCCEEEEEEEeCC-----CcEEEEEeCCCCCeEecCccccccc
Confidence 99999999999999999999999999999999999999999999999853 6899999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++++.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 198 ~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~ 277 (372)
T 2dvl_A 198 HAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGIARGAFEIAKAYAEEREQFGKKLKEHQAIAFK 277 (372)
T ss_dssp TTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred CcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHHHHHH
Confidence 99999999999999999999999999998888888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++..+++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|
T Consensus 278 la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G 357 (372)
T 2dvl_A 278 IADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAAVEVTREAVQVLGGYGYHRDYRVERYYRDAKVTEIYEG 357 (372)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGGSHHHHHHHHHGGGTTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHHHHHhhcCeecCCCCcHHHHHHHhhcceecCC
Confidence 99999999999999999999998877777889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHh
Q 019707 321 TSEIRRMIIGRALLK 335 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~ 335 (337)
++++++..|++.+++
T Consensus 358 t~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 358 TSEIQRLVIARELYR 372 (372)
T ss_dssp CHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHhhC
Confidence 999999999999875
No 12
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=1.3e-65 Score=476.20 Aligned_cols=332 Identities=32% Similarity=0.489 Sum_probs=318.6
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCch-hhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSV-GLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGAL 79 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~-a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~ 79 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++ ++.+..|..++...|..+++++||++|+|++.+|+.++++
T Consensus 66 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~ 145 (403)
T 3p4t_A 66 AAELGLLGAGFPEDAGGSGGDGADPVVICEEMHYAGSPGGVYASLFTCGIAVPHMIASGDQRLIDTYVRPTLRGEKIGAL 145 (403)
T ss_dssp HHHTTCTTBTSCGGGTCCBCCTHHHHHHHHHHHHTTCCHHHHHHHSTHHHHSHHHHHHTCHHHHHHTHHHHHTTSSCEEE
T ss_pred HHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCCchhhhHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEE
Confidence 468999999999999999999999999999999999999 8877777657788899999999999999999999999999
Q ss_pred EecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeecccccccc
Q 019707 80 AMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLG 159 (337)
Q Consensus 80 ~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g 159 (337)
++|||+.|||...++|++++++|||+|||+|.|+||+..||+++|+++++++ +.+++++|+||++.|||++.++|+.+|
T Consensus 146 a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~-~~~g~~~flV~~~~pGv~v~~~~~~~G 224 (403)
T 3p4t_A 146 AITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRADYVVTAARTGGP-GAGGVSLIVVDKGTPGFEVTRKLDKMG 224 (403)
T ss_dssp ECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSSS-SGGGEEEEEEETTCTTEEEEEECCBSS
T ss_pred EecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccCEEEEEEEeCCC-CCCceEEEEEeCCCCCeEecCCCCccc
Confidence 9999999999999999999999999999999999999999999999998764 567899999999999999999999999
Q ss_pred CCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHH
Q 019707 160 MRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQG 239 (337)
Q Consensus 160 ~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~ 239 (337)
++++++++|.||||+||++++||.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|+
T Consensus 225 ~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~pi~~~q~vq~ 304 (403)
T 3p4t_A 225 WRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAGAQRCLDLTVEWCRNRDTFGRPLISRQAVQN 304 (403)
T ss_dssp CTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHH
T ss_pred CCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCcccccHHHHH
Confidence 99999999999999999999999999999988889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCC-hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCccc
Q 019707 240 KTADMYTALQSSRSYVYSVARDCDNGKVD-PKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIG 318 (337)
Q Consensus 240 ~la~~~~~~~~~~a~~~~a~~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~ 318 (337)
+|+++...++++|++++++++.++.+.+. ...++++|.++++.+.++++.++|++||.||++++|++|+|||++...++
T Consensus 305 ~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~ 384 (403)
T 3p4t_A 305 TLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAKNTAVEAGEWVANQAVQLFGGMGYMAESEVERQYRDMRILGIG 384 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHTTTTTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHHHHHHHHHHHhhChhhccCCCcHHHHHHHhhcceec
Confidence 99999999999999999999999987766 78899999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHH
Q 019707 319 AGTSEIRRMIIGRAL 333 (337)
Q Consensus 319 ~g~~~~~~~~l~~~~ 333 (337)
+|++++++..|++.+
T Consensus 385 ~Gt~ei~~~~ia~~l 399 (403)
T 3p4t_A 385 GGTTEILTSLAAKTL 399 (403)
T ss_dssp TSCHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHc
Confidence 999999999999987
No 13
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=2.9e-65 Score=471.34 Aligned_cols=331 Identities=36% Similarity=0.583 Sum_probs=314.1
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhcc-CchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRAS-GSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGAL 79 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~-~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~ 79 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.| +++++.+ |...+...|..+++++||++|+|++.+|+.++++
T Consensus 50 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~--~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~ 127 (385)
T 2pg0_A 50 MGENGFLCPWVDEKYGGLNADFAYSVVINEELEKVGSSLVGIGL--HNDIVTPYIASYGTEEQKQKWLPKCVTGELITAI 127 (385)
T ss_dssp HHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCGGGHHHHH--HHHTTHHHHHHHCCHHHHHHHHHHHHHTSSCEEE
T ss_pred HHHCCCCCcCCChhhCCCCCCHHHHHHHHHHHHhhCCchHHHHH--HhhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEE
Confidence 468999999999999999999999999999999999 8888865 5446788899999999999999999999999999
Q ss_pred EecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCC--CCCCCeEEEEEeCCCCCeeecccccc
Q 019707 80 AMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIK--AGSKGITAFIIEKGMPGFSTAQKLDK 157 (337)
Q Consensus 80 ~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~--~~~~~~~~flvp~~~~Gv~~~~~~~~ 157 (337)
++|||+.|||...++|++++++|||+|||+|.|+||+..||+++|+++++++ ++++++++|+||++.|||++.++|++
T Consensus 128 a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~~~g~~~flV~~~~pGv~v~~~~~~ 207 (385)
T 2pg0_A 128 AMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACKTDPQAKPPHRGISLLVVERDTPGFTRGRKLEK 207 (385)
T ss_dssp ECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEESCTTCSSGGGGEEEEEEETTCTTEEECCCCCB
T ss_pred EeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccCEEEEEEEeCCccCCCCCceEEEEEeCCCCCeEecCCccc
Confidence 9999999999999999999999999999999999999999999999998644 34557899999999999999999999
Q ss_pred ccCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHH
Q 019707 158 LGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFI 237 (337)
Q Consensus 158 ~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~v 237 (337)
+|++++++++|.||||+||++++|+.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+
T Consensus 208 ~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v 287 (385)
T 2pg0_A 208 VGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTAAEVMFSLTKQYVKQRTAFGKRVSEFQTV 287 (385)
T ss_dssp SSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHH
T ss_pred cccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCccchhHHH
Confidence 99999999999999999999999999999998888888899999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcc
Q 019707 238 QGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEI 317 (337)
Q Consensus 238 q~~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~ 317 (337)
|++|+++...++++|++++++++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+
T Consensus 288 ~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i 367 (385)
T 2pg0_A 288 QFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAEAMQLHGGYGYMEEYEIARRYRDIPVSAI 367 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSHHHHHHHHGGGGGT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCCcHHHHHhhhcCcee
Confidence 99999999999999999999999999877777889999999999999999999999999999999999999999999999
Q ss_pred cCChHHHHHHHHHHHH
Q 019707 318 GAGTSEIRRMIIGRAL 333 (337)
Q Consensus 318 ~~g~~~~~~~~l~~~~ 333 (337)
++|++++++..|++.+
T Consensus 368 ~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 368 YAGTNEMMKTIIARQL 383 (385)
T ss_dssp TTSCHHHHHHHHHHHT
T ss_pred ecCHHHHHHHHHHHHh
Confidence 9999999999999875
No 14
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=6.4e-65 Score=470.00 Aligned_cols=334 Identities=30% Similarity=0.511 Sum_probs=317.0
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|. .+...|..+|+++||++|+|++.+|+.+++++
T Consensus 59 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~qk~~~l~~~~~G~~~~~~a 137 (393)
T 1rx0_A 59 AAQLGFGGVYIQTDVGGSGLSRLDTSVIFEALATGCTSTTAYISIHN-MCAWMIDSFGNEEQRHKFCPPLCTMEKFASYC 137 (393)
T ss_dssp HHHTTCSSTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHhCCCCcCCCChhhCCCCCCHHHHHHHHHHHHHhCcchhHHHHHhH-HHHHHHHHHCCHHHHHHHHHHHhCCCceEEEE
Confidence 46899999999999999999999999999999999999998888887 78889999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...+.|+|++++|||+|||+|.|+||+..||+++|++++++ ++.+++++|+||++.|||++.+.|+.+|+
T Consensus 138 ~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~-~~~~g~~~flV~~~~pGv~v~~~~~~~g~ 216 (393)
T 1rx0_A 138 LTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGG-PGPKGISCIVVEKGTPGLSFGKKEKKVGW 216 (393)
T ss_dssp CCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESSS-SSGGGEEEEEEETTCTTEEECCCCCBSSC
T ss_pred ecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccCCEEEEEEEcCC-CCCCceEEEEEeCCCCCeEecCccccccc
Confidence 99999999999999999999999999999999999999999999999864 34568999999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
+++++++|.||||+||++++||.++.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 217 ~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~ 296 (393)
T 1rx0_A 217 NSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGAAHASVILTRDHLNVRKQFGEPLASNQYLQFT 296 (393)
T ss_dssp TTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGCHHHHHH
T ss_pred CCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHHHH
Confidence 99999999999999999999999988988887778889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCC-ChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKV-DPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGA 319 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~ 319 (337)
|+++..+++++|++++.+++.++.+.+ ....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++
T Consensus 297 la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~ 376 (393)
T 1rx0_A 297 LADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICNQALQMHGGYGYLKDYAVQQYVRDSRVHQILE 376 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBTTSTHHHHHHHHHHTTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHHHHHHhcCCeeecCCChHHHHHHhccCceecC
Confidence 999999999999999999999987643 4567899999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHhc
Q 019707 320 GTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 320 g~~~~~~~~l~~~~~~~ 336 (337)
|++++++..|+|.++++
T Consensus 377 Gt~~i~~~~ia~~~l~~ 393 (393)
T 1rx0_A 377 GSNEVMRILISRSLLQE 393 (393)
T ss_dssp SCHHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHHhcC
Confidence 99999999999999874
No 15
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.3e-65 Score=470.49 Aligned_cols=329 Identities=28% Similarity=0.399 Sum_probs=305.0
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+.+|..++...|. +|+++||++|+|++.+|+ +++++
T Consensus 33 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~-~g~~~q~~~~l~~~~~G~-~~~~a 110 (366)
T 1r2j_A 33 LGADGLLCAEVAAEHGGLGLGSRENGEFTAHVGSLCSSLRSVMTSQGMAAWTVQR-LGDAGQRATFLKELTSGK-LAAVG 110 (366)
T ss_dssp HHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHH-HSCHHHHHHHHHHTTCC--CEEEE
T ss_pred HHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHHChHHHHHHHHHHHHHHHHHH-hCCHHHHHHHHHHHhCCC-eeEEE
Confidence 4689999999999999999999999999999999999999988887546777888 999999999999999999 99999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|++++++|||+|||+|.|+||+..||+++|++++++ + ++++|+||++.|||++.+.|+++|+
T Consensus 111 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~--~--g~~~flV~~~~~Gv~~~~~~~~~G~ 186 (366)
T 1r2j_A 111 FSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQED--G--SGAVVVVPADTPGVRVERVPKPSGC 186 (366)
T ss_dssp CCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCSS--S--CCEEEEEETTSTTEEEEECSSCSSS
T ss_pred eCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEEeCC--C--ceEEEEEECCCCCeEecCCcCCccC
Confidence 99999999999999999999999999999999999999999999998753 2 7899999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHH-HHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVM-MSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQG 239 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~-~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~ 239 (337)
++++++++.||||+||++++|+.++.|+... ...+...|+..++.++|+++.+++.+++|+++|.+||+|+.++|.+|+
T Consensus 187 r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~ 266 (366)
T 1r2j_A 187 RAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVGILRACRTAAVAHARTREQFGRPLGDHQLVAG 266 (366)
T ss_dssp TTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEETTEEGGGSHHHHH
T ss_pred CCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCchhhhHHHHH
Confidence 9999999999999999999999988888777 777889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCC-CCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCccc
Q 019707 240 KTADMYTALQSSRSYVYSVARDCDNG-KVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIG 318 (337)
Q Consensus 240 ~la~~~~~~~~~~a~~~~a~~~~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~ 318 (337)
+|+++..+++++|++++.+++.++.+ .+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...++
T Consensus 267 ~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~ 346 (366)
T 1r2j_A 267 HIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGAATAAQVLASAGAREGHVVERAYRDAKLMEII 346 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGC--CCHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhccCceec
Confidence 99999999999999999999999876 55677899999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHh
Q 019707 319 AGTSEIRRMIIGRALLK 335 (337)
Q Consensus 319 ~g~~~~~~~~l~~~~~~ 335 (337)
+|++++++..+++.+++
T Consensus 347 ~G~~~~~~~~ia~~~lg 363 (366)
T 1r2j_A 347 EGSSEMCRVMLAQHALA 363 (366)
T ss_dssp SSCHHHHHHHHHHHHTT
T ss_pred CCHHHHHHHHHHHHHhc
Confidence 99999999999999876
No 16
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=7.2e-66 Score=476.98 Aligned_cols=334 Identities=37% Similarity=0.591 Sum_probs=311.8
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|..++...|..+|+++||++|+|++.+|+.+++++
T Consensus 59 l~~~Gl~~l~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a 138 (396)
T 3ii9_A 59 MGEIGLLGPTIPEQYGGPGLDYVSYGLIAREVERVDSGYRSMMSVQSSLVMVPIFEFGSDAQKEKYLPKLATGEWIGCFG 138 (396)
T ss_dssp HHHTTCSSTTSCGGGTSCCCCHHHHHHHHHHHHTTCHHHHHHHHCCCCCCCHHHHHHSCHHHHHHHHHHHHHTSSCEEEE
T ss_pred HHhCCCCCCCCChhhCCCCCCHHHHHHHHHHHHHhChhHHHHHHhhhhhHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEE
Confidence 46899999999999999999999999999999999999998888876566778999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||++|||+..++|+|++++|||+|||+|.|+||+..||+++|+++++ +++.+++++|+||++.|||++.+.|+.+|+
T Consensus 139 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~-~~g~~g~~~flV~~~~pGv~v~~~~~~~G~ 217 (396)
T 3ii9_A 139 LTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLD-EDGRDEIRGFILEKGCKGLSAPAIHGKVGL 217 (396)
T ss_dssp CCCCC------CCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEEE-ETTEEEEEEEEEETTCTTEECCBCCCCSSC
T ss_pred ecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCCEEEEEEEec-CCCCCceEEEEEecCCCCeEeccccccccC
Confidence 9999999999999999999999999999999999999999999999986 334457899999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++|+. +.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 218 ~~~~~~~v~fddv~Vp~~~~l~~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~ 296 (396)
T 3ii9_A 218 RASITGEIVLDEAFVPEENILPH-VKGLRGPFTCLNSARYGIAWGALGAAESCWHIARQYVLDRKQFGRPLAANQLIQKK 296 (396)
T ss_dssp TTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred CcCCeeEEEEccEEECHHHccCC-ChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCCchhhhHHHHHH
Confidence 99999999999999999999977 77888888888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++...++++|++++++++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|
T Consensus 297 la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G 376 (396)
T 3ii9_A 297 LADMQTEITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLARDMLGGNGISDEFGVARHLVNLEVVNTYEG 376 (396)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCSCSCSGGGHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHhhhcCceeecC
Confidence 99999999999999999999999887778889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhc
Q 019707 321 TSEIRRMIIGRALLKQ 336 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~~ 336 (337)
++++++..|+|.+++-
T Consensus 377 t~~~~~~~ia~~llgl 392 (396)
T 3ii9_A 377 THDIHALILGRAQTGI 392 (396)
T ss_dssp SSCHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9999999999999863
No 17
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=7.1e-65 Score=473.23 Aligned_cols=337 Identities=23% Similarity=0.291 Sum_probs=313.0
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhh-hhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGA-HSNLCINQLVRHGSPAQKDKYLPKLISGEHVGAL 79 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~-~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~ 79 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.+.+..+.... +...+...|..+++++||++|||++.+|+.++++
T Consensus 67 l~e~G~~~~~~P~~~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~ 146 (415)
T 4hr3_A 67 ARAAGLWNLFLPDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAF 146 (415)
T ss_dssp HHHTTCSSTTCCCTTTSCCCCHHHHHHHHHHHTTCSSHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHTTSCEEEE
T ss_pred HHhCCCcCcCCCHHHCCCCCCHHHHHHHHHHHhcccchHHHHHHhccccchHHHHHHhCCHHHHHHHHHHHhCCCceeEE
Confidence 358999999999999999999999999999999987654443222 2223447899999999999999999999999999
Q ss_pred EecCCC-CCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCC--CCEEEEEEEeCCC-CCCCCeEEEEEeCCCCCeeecccc
Q 019707 80 AMSEPN-AGSDVVGMKCKADRVDGGYIINGNKMWCTNGPV--AQTLVVYAKTDIK-AGSKGITAFIIEKGMPGFSTAQKL 155 (337)
Q Consensus 80 ~~te~~-~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~--ad~~lv~a~~~~~-~~~~~~~~flvp~~~~Gv~~~~~~ 155 (337)
++|||+ .|||...++|+|++++|||+|||+|.|+||+.+ ||+++|+++++++ ++.+++++|+||++.|||++.++|
T Consensus 147 a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~~~~~~~~g~~~flV~~~~pGv~v~~~~ 226 (415)
T 4hr3_A 147 CMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERML 226 (415)
T ss_dssp ECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCTTSCTTSSEEEEEEETTSTTEEEEEEC
T ss_pred EEcCCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeCCCCCCCCceEEEEEEcCCCceEecCCC
Confidence 999999 999999999999999999999999999999966 9999999998754 345789999999999999999999
Q ss_pred ccccCCCCc--ceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 019707 156 DKLGMRGSD--TCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGE 233 (337)
Q Consensus 156 ~~~g~~~~~--~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~ 233 (337)
+++|+++++ +++|.||||+||++++||.++.|+......+...|+..++.++|+++.+++.+++|+++|.+||+|+.+
T Consensus 227 ~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fg~~i~~ 306 (415)
T 4hr3_A 227 PTMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVN 306 (415)
T ss_dssp CBTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred CccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHHhcCccCCCcHHH
Confidence 999999987 999999999999999999999999988899999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--CCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHh
Q 019707 234 FQFIQGKTADMYTALQSSRSYVYSVARDCDN--GKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRD 311 (337)
Q Consensus 234 ~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~--~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd 311 (337)
+|.+|++|+++...++++|++++++++.++. +.+....++++|.++++.+.++++.++|++||.||++++|++|+|||
T Consensus 307 ~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rd 386 (415)
T 4hr3_A 307 LGGNRERIADARIAINQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVN 386 (415)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSSSSSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHHHHHHHHHHHHHhCccccCCCchHHHHHHH
Confidence 9999999999999999999999999999886 44567789999999999999999999999999999999999999999
Q ss_pred hccCcccCChHHHHHHHHHHHHHhcC
Q 019707 312 AKLYEIGAGTSEIRRMIIGRALLKQQ 337 (337)
Q Consensus 312 ~~~~~~~~g~~~~~~~~l~~~~~~~~ 337 (337)
++...+++|++++++..|++.+++++
T Consensus 387 a~~~~i~~Gt~ei~~~~ia~~~l~~~ 412 (415)
T 4hr3_A 387 ARALRLADGPDEVHRGVVARIELAKY 412 (415)
T ss_dssp HHHTTTTTSCHHHHHHHHHHHHHHTT
T ss_pred hhhheeecCcHHHHHHHHHHHHHHHh
Confidence 99999999999999999999999875
No 18
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=2.8e-64 Score=464.79 Aligned_cols=330 Identities=30% Similarity=0.485 Sum_probs=310.5
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+.+|...+...|..+|+++||++|+|++.+|+.+++++
T Consensus 51 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~~~a 130 (385)
T 2eba_A 51 FAELGFLGPTLPPEYGGAGVSSAAYGLICYELERVDSGLRSFVSVQSSLVMYPIYAYGSEEQKREFLPKLARGEMVGCFG 130 (385)
T ss_dssp HHHHTCSSTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHHCCCcCCCCchhhCCCCCCHHHHHHHHHHHHHhCchHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 46889999999999999999999999999999999999999888886566788999999999999999999999999999
Q ss_pred ecCCCCCCCc-CCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeecccccccc
Q 019707 81 MSEPNAGSDV-VGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLG 159 (337)
Q Consensus 81 ~te~~~gs~~-~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g 159 (337)
+|||+.|||+ ..++|++++++|||+|||+|.|+||+..||+++|++++++ + + +++|+||++.|||++.+.|+.+|
T Consensus 131 ~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~--g-~-~~~flV~~~~pGv~v~~~~~~~G 206 (385)
T 2eba_A 131 LTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDEG--G-E-VLGFLVPTDTPGFQAREVKRKMS 206 (385)
T ss_dssp CCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCSEEEEEEECC-------EEEEEEETTSTTEEEEECCSBSS
T ss_pred eCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccCEEEEEEEeCC--C-c-EEEEEEeCCCCCeEecccccccc
Confidence 9999999999 8999999999999999999999999999999999999752 3 3 89999999999999999999999
Q ss_pred CCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHH
Q 019707 160 MRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQG 239 (337)
Q Consensus 160 ~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~ 239 (337)
+++++++++.||||+||++++| ..+.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|+
T Consensus 207 ~~~~~~~~v~f~~v~Vp~~~~l-~~~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~ 285 (385)
T 2eba_A 207 LRASVTSELVLEEVRVPESLRL-PKALGLKAPLSCLTQARFGIAWGAMGALEAVYEEAVAFAKSRSTFGEPLAKKQLVQA 285 (385)
T ss_dssp SCSSCEEEEEEEEEEEEGGGBC-TTCCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBSSSSBGGGSHHHHH
T ss_pred cccCceeEEEEccEEEcHHHcc-CCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCeeCCeeHHhCHHHHH
Confidence 9999999999999999999999 677788777777888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccC
Q 019707 240 KTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGA 319 (337)
Q Consensus 240 ~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~ 319 (337)
+|+++...++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++
T Consensus 286 ~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~ 365 (385)
T 2eba_A 286 KLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLAKRQNVWKALQAARMARDILGGSGITLEYHAIRHMLNLETVYTYE 365 (385)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSSHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCcChHHHHHHhccCceeeC
Confidence 99999999999999999999999987767778899999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHHHHHHHHh
Q 019707 320 GTSEIRRMIIGRALLK 335 (337)
Q Consensus 320 g~~~~~~~~l~~~~~~ 335 (337)
|++++++..+++.+++
T Consensus 366 G~~~~~~~~ia~~llg 381 (385)
T 2eba_A 366 GTHDVHTLVLGREITG 381 (385)
T ss_dssp SCHHHHHHHHHHHHHS
T ss_pred ChHHHHHHHHHHHHhC
Confidence 9999999999999975
No 19
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=1.8e-64 Score=468.40 Aligned_cols=329 Identities=31% Similarity=0.529 Sum_probs=316.4
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+ ++|||.|+++.+.+.++|++++.|+++++.+..|..++...|..+++++||++|+|++.+|+.+++++
T Consensus 71 l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a 149 (403)
T 3sf6_A 71 LGELGLLGMHL-KGYGCAGMSAVAYGLACLELEAGDSGIRSLVSVQGSLAMYAIHAFGSDEQKDQWLPDMASGHRIGCFG 149 (403)
T ss_dssp HHHTTCSSTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHTHHHHHHHHCCHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHHCCCCcccc-hhhCCCCCCHHHHHHHHHHHHHhcccHHHHHHHhhhhHHHHHHHhCCHHHHHHHHHHHhCCCceEEEE
Confidence 46899999999 99999999999999999999999999999888886567889999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||++|||+..++|+|++++|||+|||+|.|+||+..||+++|+++++ +++++|+||++.|||++.+.|+.+|+
T Consensus 150 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ar~~-----~g~~~flV~~~~pGv~v~~~~~~~G~ 224 (403)
T 3sf6_A 150 LTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWARTD-----EGIRGFVVPTDTPGFTANTIKSKMSL 224 (403)
T ss_dssp CCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEET-----TEEEEEEEETTSTTEEEEECCSCSSC
T ss_pred EccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccCEEEEEEEeC-----CceEEEEEECCCCCeEecCCCCccCC
Confidence 9999999999999999999999999999999999999999999999986 36899999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++|+. +.|+......+...|+..++.++|+++.+++.+++|+++|.+||+|+.++|.+|++
T Consensus 225 r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fg~pi~~~q~vq~~ 303 (403)
T 3sf6_A 225 RASVTSELVLDGVRLPDSARLPG-ATSLGAPLRCLNEARFGIVFGALGAARDCLETALAYACSREQFDRPIGGFQLTQQK 303 (403)
T ss_dssp TTSCEEEEEEEEEEEEGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred CCCceeEEEEccEEEcHHHccCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCcchhhHHHHHH
Confidence 99999999999999999999998 78888888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++...++++|++++++++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|
T Consensus 304 la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G 383 (403)
T 3sf6_A 304 LADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGKLNNVREAIEIARTARTVLGASGITGEYPVMRHANNLESVLTYEG 383 (403)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSSHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhcCCeEccccCcHHHHHhhcccceeecC
Confidence 99999999999999999999999887778889999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhc
Q 019707 321 TSEIRRMIIGRALLKQ 336 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~~ 336 (337)
++++++..|+|.+++.
T Consensus 384 t~~i~~~~ia~~llgl 399 (403)
T 3sf6_A 384 TSEMHTLIIGQALTGV 399 (403)
T ss_dssp CHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCc
Confidence 9999999999999874
No 20
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=3e-64 Score=466.57 Aligned_cols=329 Identities=30% Similarity=0.495 Sum_probs=316.3
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+ ++|||.|+++.+.+.++|++++.|+++++.+..|..++...|..+++++||++|+|++.+|+.+++++
T Consensus 66 l~~~Gl~~l~~-~e~GG~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~~~~G~~~~~~a 144 (399)
T 3swo_A 66 FGNLGVLGMHL-QGYGCAGTNAVSYGLACMELEAGDSGFRSFVSVQGSLSMFSIYRYGSEEQKNEWLPRLAAGDAIGCFG 144 (399)
T ss_dssp HHHHTCTTTTS-CSTTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHTTTHHHHHHHHCCHHHHHHHHHHHHHTSSCEEEE
T ss_pred HHHCCCCcCCh-hhhCCCCCCHHHHHHHHHHHHHhCccHHHHHHHHhhhhhhHHHhcCCHHHHHHHHHHHhCCCeeeEEE
Confidence 46889999999 99999999999999999999999999998888886577889999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|+|++++|||+|||+|.|+||+..||+++|+++++ +++++|+||++.|||++.+.|+.+|+
T Consensus 145 ~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~-----~g~~~flV~~~~pGv~v~~~~~~~G~ 219 (399)
T 3swo_A 145 LTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTD-----DGIRGFLVPTDTPGFTANEIHRKLSL 219 (399)
T ss_dssp CCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEBCT-----TSCEEEEEETTSTTEEEEECCCBSSC
T ss_pred ecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccCEEEEEEEeC-----CceEEEEEeCCCCCeEeecCcCcccC
Confidence 9999999999999999999999999999999999999999999999975 35899999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++||. +.|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|++
T Consensus 220 r~~~~~~v~fd~v~Vp~~~~lg~-~~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~~a~~R~~fG~~i~~~q~vq~~ 298 (399)
T 3swo_A 220 RASVTSELVLDNVRLPASAQLPL-AEGLSAPLSCLNEARFGIVFGALGAARDSLETTIAYTQSREVFDKPLSNYQLTQEK 298 (399)
T ss_dssp CSSCEEEEEEEEEEECGGGBCTT-CCSTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred CCCceeEEEEccEEEcHHHcCCC-ChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhCHHHHHH
Confidence 99999999999999999999998 88888888889999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++..+++++|++++++++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...+++|
T Consensus 299 la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G 378 (399)
T 3swo_A 299 LANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIARECRTLLGGSGITLEYSPLRHANNLESVLTYEG 378 (399)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBSSSTHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhCcccccCCCcHHHHHHHhhcceeecC
Confidence 99999999999999999999999887778899999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhc
Q 019707 321 TSEIRRMIIGRALLKQ 336 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~~ 336 (337)
++++++..|++.+++.
T Consensus 379 t~~i~~~~ia~~llg~ 394 (399)
T 3swo_A 379 TSEMHLLSIGKALTGK 394 (399)
T ss_dssp CHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHcCc
Confidence 9999999999999874
No 21
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=8.6e-64 Score=467.06 Aligned_cols=331 Identities=29% Similarity=0.482 Sum_probs=313.2
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+| +|||.|+++.+...++|++++.|+++++.+..|..++...|..+|+++||++|+|++.+|+.+++++
T Consensus 95 l~e~Gl~~l~~p-e~GG~G~~~~~~~~v~eela~~~~~~~~~~~~~~~~~~~~l~~~gt~~qk~~~l~~l~~G~~~~a~a 173 (436)
T 2ix5_A 95 LGAMGVAGGSIK-GYGCPGLSITANAIATAEIARVDASCSTFILVHSSLGMLTIALCGSEAQKEKYLPSLAQLNTVACWA 173 (436)
T ss_dssp HHTTTCTTTTCC-STTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHHcCCCcCcCC-CCCCCCCCHHHHHHHHHHHHhhCccHHHHHHhHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeeEEE
Confidence 468999999999 9999999999999999999999999988777776567888999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
+|||+.|||...++|+|++++|||+|||+|.|+||+..||+++|+++++++ +++++|+||++.|||++.+.|+.+|+
T Consensus 174 ~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~~~---~~~~~flV~~~~pGv~v~~~~~~~G~ 250 (436)
T 2ix5_A 174 LTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTT---NQINGFIVKKDAPGLKATKIPNKIGL 250 (436)
T ss_dssp CCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETTT---SSEEEEEEETTCTTEEEEECCCBSSS
T ss_pred ecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEECCC---CcEEEEEEECCCCCeEeeccccccCC
Confidence 999999999999999999999999999999999999999999999998632 46899999999999999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHH
Q 019707 161 RGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGK 240 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~ 240 (337)
++++++++.||||+||++++|+.. .++......+...|+..++.++|+++.+++.+++|+++|.+||+|+.++|.+|++
T Consensus 251 r~~~~~~v~fddv~VP~~~~lg~~-~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~ 329 (436)
T 2ix5_A 251 RMVQNGDILLQNVFVPDEDRLPGV-NSFQDTSKVLAVSRVMVAWQPIGISMGIYDMCHRYLKERKQFGAPLAAFQLNQQK 329 (436)
T ss_dssp TTSCEEEEEEEEEEEEGGGBCTTC-SSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHH
T ss_pred CcCCceeEEeccEEECHHHcCCcc-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCcchhhcHHHHHH
Confidence 999999999999999999999876 4677778888999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCC
Q 019707 241 TADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAG 320 (337)
Q Consensus 241 la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g 320 (337)
|+++..+++++|++++++++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++.+.+++|
T Consensus 330 la~~~~~~~aar~l~~~aa~~~d~g~~~~~~as~aK~~a~e~a~~v~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~~G 409 (436)
T 2ix5_A 330 LVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLGRELLGGNGILADFLVAKAFCDLEPIYTYEG 409 (436)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGBGGGSHHHHHHHHHHHHHSSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHHHHHhCccccccCChHHHHHHHhhcceeecC
Confidence 99999999999999999999999877667788999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHhc
Q 019707 321 TSEIRRMIIGRALLKQ 336 (337)
Q Consensus 321 ~~~~~~~~l~~~~~~~ 336 (337)
++++++..|+|.+++.
T Consensus 410 t~ei~~~~iar~llgl 425 (436)
T 2ix5_A 410 TYDINTLVTGREVTGI 425 (436)
T ss_dssp CHHHHHHHHHHHHHSC
T ss_pred HHHHHHHHHHHHHhCC
Confidence 9999999999999763
No 22
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=1.2e-64 Score=469.33 Aligned_cols=331 Identities=39% Similarity=0.673 Sum_probs=316.1
Q ss_pred CccccccCCCCCccCCCCCC--CHHHHHHHHHHHHhccCchhhHhhhhhhhHHH-HHHhcCCHHHHhhhchhhhcCccee
Q 019707 1 MGNFNLHGITAPQEYGGLGL--GYLYHCIAMEEISRASGSVGLSYGAHSNLCIN-QLVRHGSPAQKDKYLPKLISGEHVG 77 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~--~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~-~l~~~g~~~~~~~~l~~i~~g~~~~ 77 (337)
|++.||+++.+|++|||.|+ ++.+.+.++|++++.|+++++.+..|. .+.. .+..+++++|+++|+|++.+|+.++
T Consensus 46 l~~~Gl~~l~~P~~~GG~g~~~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~~l~~~g~~~q~~~~l~~~~~g~~~~ 124 (397)
T 3mpi_A 46 MGELGFFGTVIPEEYGGEGMDQGWLAAMIVTEEIARGSSALRVQLNMEV-LGCAYTILTYGSEALKKKYVPKLSSAEFLG 124 (397)
T ss_dssp HHHTTTTCTTSCGGGTSCCCTTHHHHHHHHHHHHHHHCHHHHHHHHHHT-TTTHHHHHHHSCHHHHHHHHHHHHTTSSCC
T ss_pred HHHCCCCccCCChhhCCCCCCCCHHHHHHHHHHHHhhCchHHHHHHHHH-HhHHHHHHHhCCHHHHHHHHHHHhCCCeEE
Confidence 46899999999999999999 999999999999999999999888886 6666 9999999999999999999999999
Q ss_pred EEEecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEE-eCCCCCeeeccccc
Q 019707 78 ALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFII-EKGMPGFSTAQKLD 156 (337)
Q Consensus 78 ~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flv-p~~~~Gv~~~~~~~ 156 (337)
++++|||..|||...+.|+|++++|||+|||+|.|+||+..||+++|+++++++++.+++++|+| |++.|||++ ++|+
T Consensus 125 ~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~~~Gv~v-~~~~ 203 (397)
T 3mpi_A 125 GFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAAGSRGLSAFVIEPRNFPGIKT-SNLE 203 (397)
T ss_dssp CEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSSEEEEEESCGGGGGGSEEEEEECTTTSTTEEE-EECC
T ss_pred EEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccCEEEEEEEcCCCCCCCceEEEEEEcCCCCCeEe-ccCc
Confidence 99999999999999999999999999999999999999999999999999876556678999999 999999999 9999
Q ss_pred cccCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchH
Q 019707 157 KLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQF 236 (337)
Q Consensus 157 ~~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~ 236 (337)
.+|+++++++++.||||+||++++|+.++.|+......+...|+..++.++|+++++++.+++|+++|.++|+|+.++|.
T Consensus 204 ~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~~a~~R~~fg~~i~~~q~ 283 (397)
T 3mpi_A 204 KLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVGLAQACLDAAIKYCNERRQFGKPIGDFQM 283 (397)
T ss_dssp CSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHH
T ss_pred cccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCchhhhHH
Confidence 99999999999999999999999999999999888888999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCC-CCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccC
Q 019707 237 IQGKTADMYTALQSSRSYVYSVARDCDNG-KVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLY 315 (337)
Q Consensus 237 vq~~la~~~~~~~~~~a~~~~a~~~~~~~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~ 315 (337)
+|++|+++...++++|++++++++.++.+ .+....++++|.++++.+.++++.+++++||.||++++|++|+|||++.+
T Consensus 284 vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~ 363 (397)
T 3mpi_A 284 NQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEAVSKCANYAMRILGAYGYSTEYPVARFYRDAPTY 363 (397)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHTTHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCCCHHHHHhhccce
Confidence 99999999999999999999999999987 56677899999999999999999999999999999999999999999999
Q ss_pred cccCChHHHHHHHHH-HHH
Q 019707 316 EIGAGTSEIRRMIIG-RAL 333 (337)
Q Consensus 316 ~~~~g~~~~~~~~l~-~~~ 333 (337)
.+++|++++++..|+ |.+
T Consensus 364 ~i~~Gt~ei~~~~ia~~~l 382 (397)
T 3mpi_A 364 YMVEGSANICKMIIALDQL 382 (397)
T ss_dssp HHSSSCHHHHHHHHHHHHH
T ss_pred eeecCHHHHHHHHHHHHhc
Confidence 999999999999999 765
No 23
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=2.8e-63 Score=477.97 Aligned_cols=331 Identities=34% Similarity=0.587 Sum_probs=308.4
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.+ +.+..+..|...+...+..+|+++||++|||++.+|+++++++
T Consensus 74 l~e~Gl~gl~vPee~GG~G~~~~~~~~v~Eel~~~~-~~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~la~Ge~~~a~a 152 (597)
T 3owa_A 74 AGELGLLGADVPEEYGGIGLDKVSSALIAEKFSRAG-GFAITHGAHVGIGSLPIVLFGNEEQKKKYLPLLATGEKLAAYA 152 (597)
T ss_dssp HHHTTTTCTTSCGGGTCCCCCHHHHHHHHHHHGGGT-HHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHHTSSCEEEE
T ss_pred HHHCCCCcCCCChhhCCCCCCHHHHHHHHHHHHccc-hHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHhCCCcceeeE
Confidence 368899999999999999999999999999999986 4444555665466667889999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeCC--eEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccc
Q 019707 81 MSEPNAGSDVVGMKCKADRVDG--GYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKL 158 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~--g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~ 158 (337)
+|||++|||....+|+|+++++ +|+|||+|.|+||+..||+++|+|++++ +++++|+||++.|||++.+.|+++
T Consensus 153 lTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art~~----~g~s~flV~~~~pGv~v~~~~~~~ 228 (597)
T 3owa_A 153 LTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDG----EHFSAFIVEKDYAGVSTSPEEKKM 228 (597)
T ss_dssp CCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT----TEEEEEEEETTSTTEEECCCCCBS
T ss_pred ecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEeCC----CceEEEEEeCCCCCeEEecccccc
Confidence 9999999999999999998644 5999999999999999999999999854 378999999999999999999999
Q ss_pred cCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHH
Q 019707 159 GMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQ 238 (337)
Q Consensus 159 g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq 238 (337)
|+++++++++.|+||+||.+++||..+.|+......+..+|+.+++.++|+++.+++.+++|+++|.+||+|+.++|.+|
T Consensus 229 Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~lG~a~~al~~a~~ya~~R~qfG~pi~~~q~vq 308 (597)
T 3owa_A 229 GIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTVGSAKRAVEISAQYANQRQQFKQPIARFPLIQ 308 (597)
T ss_dssp SCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHH
T ss_pred cCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHHHHHHHHHHHHHHHHHhCeeCCccccccHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCC-------------------CChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcc
Q 019707 239 GKTADMYTALQSSRSYVYSVARDCDNGK-------------------VDPKDCAGVILCAAERATQVTLQAIQCLGGNGY 299 (337)
Q Consensus 239 ~~la~~~~~~~~~~a~~~~a~~~~~~~~-------------------~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~ 299 (337)
++|++|...++++|++++++++.+|+.. +....++++|.++++.+.++++.++|++||.||
T Consensus 309 ~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~aK~~ase~a~~v~~~a~qi~GG~G~ 388 (597)
T 3owa_A 309 EKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEYAIECSLNKVFGSEVLDYTVDEGVQIHGGYGF 388 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGG
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCccc
Confidence 9999999999999999999999887542 234568899999999999999999999999999
Q ss_pred cCcchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 019707 300 VNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 300 ~~~~~~~r~~rd~~~~~~~~g~~~~~~~~l~~~~~~~ 336 (337)
++++|++|+|||++...+++|++++++..|++.++++
T Consensus 389 ~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~ 425 (597)
T 3owa_A 389 MAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRK 425 (597)
T ss_dssp BTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHH
T ss_pred cccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999875
No 24
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=1.4e-62 Score=473.47 Aligned_cols=331 Identities=37% Similarity=0.604 Sum_probs=310.7
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++ ..|+++++.+..|..++...|..+|+++||++|||++.+|++++|++
T Consensus 69 l~e~Gl~~l~vPee~GG~g~~~~~~~~v~eel-~~~~s~~~~~~~~~~~~~~~l~~~Gt~eQk~~~Lp~l~~G~~~~a~a 147 (577)
T 2z1q_A 69 AGELGLLAIDVPEEYGGLDLPKVISTVVAEEL-SGSGGFSVTYGAHTSIGTLPLVYFGTEEQKRKYLPKLASGEWIAAYC 147 (577)
T ss_dssp HHHTTTTSTTSCGGGTCCCCCHHHHHHHHHHH-TTSCTHHHHHHHHHTTTTHHHHHHCCHHHHHTTHHHHHHTSSCEEEE
T ss_pred HHHCCCCCcCCChhhCCCCCCHHHHHHHHHHH-hhcccHHHHHhhhHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 46899999999999999999999999999999 78999998888886556678999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEe--CCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccc
Q 019707 81 MSEPNAGSDVVGMKCKADRV--DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKL 158 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~--~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~ 158 (337)
+|||++|||...++|+|+++ +++|+|||+|+|+||+..||+++|+|++++ +++++|+||++.|||++.+.|+++
T Consensus 148 lTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~g----~gis~flVp~~~pGv~v~~~~~~~ 223 (577)
T 2z1q_A 148 LTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDG----EHFTAFLVERDTPGLSFGPEEKKM 223 (577)
T ss_dssp CCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT----TEEEEEEEETTCTTEEECCCCCBS
T ss_pred ecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeCC----CeeEEEEEeCCCCCeEecCCCCCC
Confidence 99999999999999999985 447999999999999999999999999852 578999999999999999999999
Q ss_pred cCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHH
Q 019707 159 GMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQ 238 (337)
Q Consensus 159 g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq 238 (337)
|+++++++++.|+||+||.+++||.++.|+......+..+|+..++.++|+++.+++.+++|+++|.+||.||.++|.+|
T Consensus 224 G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~pi~~~q~vq 303 (577)
T 2z1q_A 224 GIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAVGGAKRALELSAQYATQRVQFGRPIGRFGLIQ 303 (577)
T ss_dssp SCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSSSBGGGSHHHH
T ss_pred CCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCccCCCchhhhHHHH
Confidence 99999999999999999999999999999988888899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCC--------------CCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcch
Q 019707 239 GKTADMYTALQSSRSYVYSVARDCDNG--------------KVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYA 304 (337)
Q Consensus 239 ~~la~~~~~~~~~~a~~~~a~~~~~~~--------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 304 (337)
++|+++.+.++++|++++.+++.++.. .+....++++|.++++.+.++++.++|++||.||++++|
T Consensus 304 ~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~ 383 (577)
T 2z1q_A 304 QKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEASIIKVLGSEVLDYVVDEGVQIHGGYGYSQEYP 383 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcchhhHHHHHHHHHHHHHHHHHHHHHHHHHhCCeeecCCCh
Confidence 999999999999999999999887754 133467889999999999999999999999999999999
Q ss_pred HHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 019707 305 TGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 305 ~~r~~rd~~~~~~~~g~~~~~~~~l~~~~~~~ 336 (337)
++|+|||++...+++|++++++..|++.++++
T Consensus 384 l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~ 415 (577)
T 2z1q_A 384 IERAYRDARINRIFEGTNEINRLLIPGMLLRR 415 (577)
T ss_dssp HHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC
T ss_pred HHHHHhhCcceeeeCcHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999988764
No 25
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=4.8e-62 Score=450.93 Aligned_cols=329 Identities=32% Similarity=0.486 Sum_probs=309.3
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+ ++|||.|+++.+...++|++++.|+++++.+..|..++...+..+|+++||++|+|++.+|+.+++++
T Consensus 54 l~~~Gl~~l~~-~~~GG~g~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~l~~~g~~~q~~~~l~~l~~g~~~~~~a 132 (392)
T 1siq_A 54 MGELGVLGPTI-KGYGCAGVSSVAYGLLARELERVDSGYRSAMSVQSSLVMHPIYAYGSEEQRQKYLPQLAKGELLGCFG 132 (392)
T ss_dssp HHHTTCSSTTC-EETTEECCCHHHHHHHHHHHHTTCHHHHHHHHHHHHTTHHHHHHHSCHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHhCCCCcccH-HhhCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHhHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 46899999999 99999999999999999999999999988776765456778889999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEe--CCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccc
Q 019707 81 MSEPNAGSDVVGMKCKADRV--DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKL 158 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~--~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~ 158 (337)
+|||+.|||+..++|+|+++ +|||+|||+|.|+||+..||+++|++++++ +++++|+||++.|||++.+.|+++
T Consensus 133 ~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~~~~----g~~~~flV~~~~pGv~v~~~~~~~ 208 (392)
T 1siq_A 133 LTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED----GCIRGFLLEKGMRGLSAPRIQGKF 208 (392)
T ss_dssp CCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEEETT----SCEEEEEEETTCTTEECCBCCCCS
T ss_pred ECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEEECC----CCEEEEEEeCCCCCeEeccccccc
Confidence 99999999999999999999 999999999999999999999999999853 248899999999999999999999
Q ss_pred cCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHH
Q 019707 159 GMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQ 238 (337)
Q Consensus 159 g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq 238 (337)
|+++++++++.||||+||++++++.. .|+......+...|+..++.++|+++++++.+++|+++|.+||+|+.++|.+|
T Consensus 209 G~~~~~~~~v~fd~v~Vp~~~~lg~~-~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq 287 (392)
T 1siq_A 209 SLRASATGMIIMDGVEVPEENVLPGA-SSLGGPFGCLNNARYGIAWGVLGASEFCLHTARQYALDRMQFGVPLARNQLIQ 287 (392)
T ss_dssp SSTTSCEEEEEEEEEEEEGGGBCTTC-CSSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHH
T ss_pred cccCCceEEEEEccEEECHHHcCCcc-cCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCeeCCcchhhhHHHH
Confidence 99999999999999999999999875 46666667778889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCccc
Q 019707 239 GKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIG 318 (337)
Q Consensus 239 ~~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~ 318 (337)
++|+++...++++|++++.+++.++.+.+....++++|.++++.+.++++.++|++||.||++++|++|+|||++...++
T Consensus 288 ~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~aK~~~~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rd~~~~~~~ 367 (392)
T 1siq_A 288 KKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIARQARDMLGGNGISDEYHVIRHAMNLEAVNTY 367 (392)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSGGGSHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCCCcHHHHHhhCcCCeee
Confidence 99999999999999999999999988776677889999999999999999999999999999999999999999999999
Q ss_pred CChHHHHHHHHHHHHHh
Q 019707 319 AGTSEIRRMIIGRALLK 335 (337)
Q Consensus 319 ~g~~~~~~~~l~~~~~~ 335 (337)
+|++++++..+++.+++
T Consensus 368 ~G~~~~~~~~i~~~llg 384 (392)
T 1siq_A 368 EGTHDIHALILGRAITG 384 (392)
T ss_dssp SSCHHHHHHHHHHHHHS
T ss_pred cCcHHHHHHHHHHHHhC
Confidence 99999999999999876
No 26
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=1.3e-61 Score=467.79 Aligned_cols=334 Identities=34% Similarity=0.545 Sum_probs=311.3
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|++..+...++|++++.|+++++.+..|...+...|..+|+++||++|+|++.+|+++++++
T Consensus 88 l~e~Gl~~l~~P~e~GG~gl~~~~~~~v~e~l~~~~~s~a~~~~~~~~~g~~~l~~~Gt~eqk~~~Lp~l~~G~~~~~~a 167 (607)
T 2uxw_A 88 LKELGAFGLQVPSELGGVGLCNTQYARLVEIVGMHDLGVGITLGAHQSIGFKGILLFGTKAQKEKYLPKLASGETVAAFC 167 (607)
T ss_dssp HHHTTTTCTTSCGGGTSCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHTTTTHHHHHHCCHHHHHHHHHHHHTTSSCEEEE
T ss_pred HHHcCCcCCCCChhhCCCCCCHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 46899999999999999999999999999999999999998888775355788999999999999999999999999999
Q ss_pred ecCCCCCCCcCCcEeEEEEeC--CeEEEeeeeEeeeCCCCCCEEEEEEEeCCCC---C--CCCeEEEEEeCCCCCeeecc
Q 019707 81 MSEPNAGSDVVGMKCKADRVD--GGYIINGNKMWCTNGPVAQTLVVYAKTDIKA---G--SKGITAFIIEKGMPGFSTAQ 153 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~--~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~---~--~~~~~~flvp~~~~Gv~~~~ 153 (337)
+|||+.|||...++|+|++++ ++|+|||.|+|+|++..||+++|+|++++.+ + .+++++|+||++.|||++.+
T Consensus 168 lTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~~~~~~g~~~~gis~flVp~~~~Gv~v~~ 247 (607)
T 2uxw_A 168 LTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPVTDPATGAVKEKITAFVVERGFGGITHGP 247 (607)
T ss_dssp CCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEEECTTTCCEEEEEEEEEEEGGGSSEEECC
T ss_pred ecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecCCCcccCCCCCceEEEEEeCCCCCeEEec
Confidence 999999999999999999974 3799999999999999999999999985321 1 35789999999999999999
Q ss_pred ccccccCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCc
Q 019707 154 KLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGE 233 (337)
Q Consensus 154 ~~~~~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~ 233 (337)
.|+++|+++++++++.|+||+||.+++||.++.|+..+...+..+|+..++.++|+++.+++.+++|+++|.+||+||.+
T Consensus 248 ~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~qfG~pi~~ 327 (607)
T 2uxw_A 248 PEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAALAGTMRGIIAKAVDHATNRTQFGEKIHN 327 (607)
T ss_dssp CCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGG
T ss_pred CccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccCCchhh
Confidence 99999999999999999999999999999999999988888889999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-CChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhh
Q 019707 234 FQFIQGKTADMYTALQSSRSYVYSVARDCDNGK-VDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDA 312 (337)
Q Consensus 234 ~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~~~-~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~ 312 (337)
+|.+|++|+++...+++++++++.+++.+|.+. +....++++|.++++.+.++++.++|++||.||++++|++|+|||+
T Consensus 328 ~~~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se~a~~v~~~a~qv~GG~G~~~e~~l~r~~Rda 407 (607)
T 2uxw_A 328 FGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAWKVTDECIQIMGGMGFMKEPGVERVLRDL 407 (607)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHSSTTSHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccccCccHHHHHHHhc
Confidence 999999999999999999999999999888764 3457889999999999999999999999999999999999999999
Q ss_pred ccCcccCChHHHHHHHHHHHHH
Q 019707 313 KLYEIGAGTSEIRRMIIGRALL 334 (337)
Q Consensus 313 ~~~~~~~g~~~~~~~~l~~~~~ 334 (337)
+...+++|++++++..+++..+
T Consensus 408 ~~~~i~eGt~~i~~~~ia~~gl 429 (607)
T 2uxw_A 408 RIFRIFEGTNDILRLFVALQGC 429 (607)
T ss_dssp GGGGTSSSCHHHHHHHHHHHHH
T ss_pred ccceeeCChHHHHHHHHHHHHH
Confidence 9999999999999998865543
No 27
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=7e-62 Score=456.11 Aligned_cols=334 Identities=22% Similarity=0.321 Sum_probs=309.8
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcC--cceeE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISG--EHVGA 78 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g--~~~~~ 78 (337)
|++.||+++.+|++|||.|+++.+.+.++|+|++.|+++++.+..|. ++...+..+++++ +++||+++.+| +.+++
T Consensus 54 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~-~~~~l~~~~~G~g~~~~~ 131 (438)
T 3mkh_A 54 AVSAGILKGQISPAHGGTGGTLIESAILVEECYSVEPSAALTIFATG-LGLTPINLAAGPQ-HAEFLAPFLSGEGSPLAS 131 (438)
T ss_dssp HHHTTTTGGGSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHHHHCCGG-GHHHHGGGSSSCSCCCEE
T ss_pred HHhCCCCCCCCCcccCCCCCCHHHHHHHHHHHHhhChhHHHHHHHhh-HHHHHHHhhCCHH-HHHHHHHHhcCCCCceEE
Confidence 46899999999999999999999999999999999999998877765 7777888899999 99999999996 58999
Q ss_pred EEecCCCCCC-----CcCCcEeEEEEeCCeEEEeeeeEeeeCCC-----CCCEEEEEEEeCC------CCCCCCeEEEEE
Q 019707 79 LAMSEPNAGS-----DVVGMKCKADRVDGGYIINGNKMWCTNGP-----VAQTLVVYAKTDI------KAGSKGITAFII 142 (337)
Q Consensus 79 ~~~te~~~gs-----~~~~~~~~a~~~~~g~~l~G~k~~~s~~~-----~ad~~lv~a~~~~------~~~~~~~~~flv 142 (337)
+++|||+.|| |...++|+|++++|||+|||+|.|+||+. .||+++|++++.+ .++.+++++|+|
T Consensus 132 ~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~~~~Ad~~~v~a~~~~~~~~~~~~~~~g~~~flV 211 (438)
T 3mkh_A 132 LVFSEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWATNCAGWDFKGCDLACVVCRDATTPLEEGQDPENKVMIILV 211 (438)
T ss_dssp EECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCTTTTCTTSSCCSEEEEEEEECSSCCCTTCCGGGGEEEEEE
T ss_pred EEEccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEecCCCccccccCcEEEEEEEecCcccCcccCCCCceEEEEE
Confidence 9999999998 58889999999999999999999999997 8999999999853 122357999999
Q ss_pred eCCC-----CC-eeeccccccccCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHH
Q 019707 143 EKGM-----PG-FSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDV 216 (337)
Q Consensus 143 p~~~-----~G-v~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~ 216 (337)
|++. || |++.+.|+.+|++++++++|.||||+||++++||.++.|+..+...+...|+..++.++|+++++++.
T Consensus 212 ~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~lG~a~~al~~ 291 (438)
T 3mkh_A 212 TRADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPTKNVLCPAGQGAKVAFGAFDGSAVLVGAMGVGLMRAAFDA 291 (438)
T ss_dssp EHHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEEEEEEEGGGEEECTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ecCccccCCCCcEEecCcCCCcCCcCCCceEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 9885 98 99999999999999999999999999999999999999998888889999999999999999999999
Q ss_pred HHHHHHhhhhcC-CCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC----hhhhhHHHHHHHHHHHHHHHHHH
Q 019707 217 VLPYVRQREQFG-RPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD----PKDCAGVILCAAERATQVTLQAI 291 (337)
Q Consensus 217 a~~~~~~r~~~g-~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~~~~~----~~~~~~~k~~~~~~~~~~~~~~~ 291 (337)
+++|+++|.++| +|+.++|.+|++|+++..+++++|++++++++.++.+.+. ...++++|.++++.+.++++.++
T Consensus 292 a~~ya~~R~~~g~~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~aK~~a~e~a~~~~~~a~ 371 (438)
T 3mkh_A 292 ALKFAKEDNRGGAVPLLERQAFADLLSGVKIQTEAARALTWKAAHAMENGPGDYDARRELALAAKVFCSEAAVKACTDVI 371 (438)
T ss_dssp HHHHHHHCCTTCSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcEeCCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999998 9999999999999999999999999999999999876532 22367899999999999999999
Q ss_pred HhhCCCcccCcchHHHHHHhhccCcccCChH-HHHHHHHHHHHHhc
Q 019707 292 QCLGGNGYVNEYATGRLLRDAKLYEIGAGTS-EIRRMIIGRALLKQ 336 (337)
Q Consensus 292 ~~~G~~~~~~~~~~~r~~rd~~~~~~~~g~~-~~~~~~l~~~~~~~ 336 (337)
|++||.||++++|++|+|||++.+.+++|++ ++++..+++.++++
T Consensus 372 q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 372 NAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp HHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred HHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999998 99999999999986
No 28
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=5.2e-61 Score=450.16 Aligned_cols=334 Identities=19% Similarity=0.319 Sum_probs=308.0
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhh--cCcceeE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLI--SGEHVGA 78 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~--~g~~~~~ 78 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|. ++...+..+|+++||++|+|++. +|+.+++
T Consensus 52 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~~~~~~G~~~~~ 130 (439)
T 2c12_A 52 AVRHGLIKAQVPIPLGGTMESLVHESIILEELFAVEPATSITIVATA-LGLMPVILCDSPSLQEKFLKPFISGEGEPLAS 130 (439)
T ss_dssp HHHTTTTGGGSBGGGTCCBCCHHHHHHHHHHHHTTCCTTHHHHHHHH-HHHHHHHHSSCHHHHHHHTGGGGSSCSCCCEE
T ss_pred HHHCCCCCCCCChhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHhH-HHHHHHHHhCCHHHHHHHHHHHhhcCCCEEEE
Confidence 46899999999999999999999999999999999999999887876 77778999999999999999999 6999999
Q ss_pred EEecCCCCCC-----CcCCcEeEEEEeCCeEEEeeeeEeeeCCC-----CCCEEEEEEEe-C----CC----CCCCCeEE
Q 019707 79 LAMSEPNAGS-----DVVGMKCKADRVDGGYIINGNKMWCTNGP-----VAQTLVVYAKT-D----IK----AGSKGITA 139 (337)
Q Consensus 79 ~~~te~~~gs-----~~~~~~~~a~~~~~g~~l~G~k~~~s~~~-----~ad~~lv~a~~-~----~~----~~~~~~~~ 139 (337)
+++|||+.|| |...++|+|++++|||+|||+|.|+||+. .||+++|+|++ + ++ ++.+++++
T Consensus 131 ~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~~~~~~~~~Ad~~~v~ar~~~~~~~~~~~~~~~~~g~~~ 210 (439)
T 2c12_A 131 LMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGADLACVVCRVSDDPSKPQDPNVDPATQIAV 210 (439)
T ss_dssp EECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTTTTTTTSSCCSEEEEEEEECSCTTSCCCTTSCGGGGEEE
T ss_pred EEecCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecCCCccccccCcEEEEEEEcCCcccCccccccCCCCceEE
Confidence 9999999887 57778999999999999999999999997 99999999998 5 22 23457899
Q ss_pred EEEeCCCC------CeeeccccccccCCCCcceeEEEceeeeCCCCcccCCCchHH-HHHHhhhHHHHHHHHHHHHHHHH
Q 019707 140 FIIEKGMP------GFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVY-VMMSGLDLERLVLAAGPLGIMQA 212 (337)
Q Consensus 140 flvp~~~~------Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~-~~~~~~~~~~~~~~a~~~G~~~~ 212 (337)
|+||++.| |+++.+.|+++|++++++++|.||||+||++++|+.++.|+. .....+...|+..++.++|+++.
T Consensus 211 flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G~a~~ 290 (439)
T 2c12_A 211 LLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPGLKAQGLVETAFAMSAALVGAMAIGTARA 290 (439)
T ss_dssp EEECHHHHHTSCGGGEEEEECCCBSSCTTCCCCEEEEEEEEEEGGGBCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCcccCCCceEeCCcccccccCCCCceEEEEccEEecHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 888999999999999999999999999999999999988988 78888899999999999999999
Q ss_pred HHHHHHHHHHh-hhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC----hhhhhHHHHHHHHHHHHHH
Q 019707 213 CLDVVLPYVRQ-REQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD----PKDCAGVILCAAERATQVT 287 (337)
Q Consensus 213 al~~a~~~~~~-r~~~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~~~~~----~~~~~~~k~~~~~~~~~~~ 287 (337)
+++.+++|+++ |.++|+|+.++|.+|++|+++...++++|++++.+++.++.+.+. ...++++|.++++.+.+++
T Consensus 291 al~~a~~ya~~rr~~~G~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~~~~aK~~a~~~a~~v~ 370 (439)
T 2c12_A 291 AFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLEDEALEWKVKLEMAMQTKIYTTDVAVECV 370 (439)
T ss_dssp HHHHHHHHHHHCCTTSSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhhceeeCCeehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccchhhHHHHHHHHHHHHHHHHHHH
Confidence 99999999997 778899999999999999999999999999999999999876542 2357899999999999999
Q ss_pred HHHHHhhCCCcccCcchHHHHHHhhccCcccCChH-HHHHHHHHHHHHh
Q 019707 288 LQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTS-EIRRMIIGRALLK 335 (337)
Q Consensus 288 ~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g~~-~~~~~~l~~~~~~ 335 (337)
+.++|++||.||++++|++|+|||++...+++|++ ++++..+++.+..
T Consensus 371 ~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l~~ 419 (439)
T 2c12_A 371 IDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMAL 419 (439)
T ss_dssp HHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHHTS
T ss_pred HHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999988 7999999876643
No 29
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=2e-61 Score=451.25 Aligned_cols=332 Identities=22% Similarity=0.332 Sum_probs=305.0
Q ss_pred ccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCc-hhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 2 GNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGS-VGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 2 ~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~-~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
++.||+++.+|+ |.|+++.+...++|++++.+.+ .++....+...+...|..+|+++||++|+|++.+|+.+++++
T Consensus 77 ~~~Gl~~l~~P~---G~g~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~qk~~~l~~l~~G~~~~~~a 153 (428)
T 2wbi_A 77 KVEGLWNLFLPA---VSGLSHVDYALIAEETGKCFFAPDVFNCQAPDTGNMEVLHLYGSEEQKKQWLEPLLQGNITSCFC 153 (428)
T ss_dssp HHTTCCSTTCHH---HHCCCHHHHHHHHHHHTTSTTHHHHTTCCTTHHHHHHHHHHHCCHHHHHHTHHHHHHTSSEEEEE
T ss_pred HHCCCCeecCCC---CCCCCHHHHHHHHHHHHhhcchhhhHhhhccchhHHHHHHHhCCHHHHHHHHHHHhCCCeEEEEE
Confidence 578999999999 8899999999999999998743 333333332256778889999999999999999999999999
Q ss_pred ecCCC-CCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCC--CCEEEEEEEeCCC--CCCCCeEEEEEeCCCCCeeecccc
Q 019707 81 MSEPN-AGSDVVGMKCKADRVDGGYIINGNKMWCTNGPV--AQTLVVYAKTDIK--AGSKGITAFIIEKGMPGFSTAQKL 155 (337)
Q Consensus 81 ~te~~-~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~--ad~~lv~a~~~~~--~~~~~~~~flvp~~~~Gv~~~~~~ 155 (337)
+|||+ +|||...+.|+|++++|||+|||+|.|+||+.. ||+++|+++++++ ++.+++++|+||++.|||++.++|
T Consensus 154 ~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~~~~~~~~~g~~~flV~~~~pGv~v~~~~ 233 (428)
T 2wbi_A 154 MTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQNTSLSRHKQHSMILVPMNTPGVKIIRPL 233 (428)
T ss_dssp CCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECCCTTSCGGGCEEEEEEETTSTTEEEEEEC
T ss_pred EecCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeCCccCCCCCceEEEEEECCCCcEEecCCC
Confidence 99999 999999999999999999999999999999987 9999999998644 234578999999999999999999
Q ss_pred ccccCCCCc---ceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCC
Q 019707 156 DKLGMRGSD---TCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLG 232 (337)
Q Consensus 156 ~~~g~~~~~---~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~ 232 (337)
+++|+++++ +++|.||||+||++++||.++.|+......+..+|+..++.++|+++++++.+++|+++|.+||+|+.
T Consensus 234 ~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~ 313 (428)
T 2wbi_A 234 SVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRIHHCMRTVGLAERALQIMCERATQRIAFKKKLY 313 (428)
T ss_dssp CBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGG
T ss_pred CccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCChh
Confidence 999999995 99999999999999999999999988888888999999999999999999999999999999999999
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-C-CCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHH
Q 019707 233 EFQFIQGKTADMYTALQSSRSYVYSVARDCDN-G-KVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLR 310 (337)
Q Consensus 233 ~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~-~-~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~r 310 (337)
++|.+|++|+++..+++++|++++++++.++. + .+....++++|.++++.+.++++.++|++||.||++++|++|+||
T Consensus 314 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~G~~~~~~~~r~~R 393 (428)
T 2wbi_A 314 AHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPRAVSKIVDWAIQVCGGAGVSQDYPLANMYA 393 (428)
T ss_dssp GSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHTGGGGGSTTSSHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCCcHHHHHH
Confidence 99999999999999999999999999998876 2 345678899999999999999999999999999999999999999
Q ss_pred hhccCcccCChHHHHHHHHHHHHHhc
Q 019707 311 DAKLYEIGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 311 d~~~~~~~~g~~~~~~~~l~~~~~~~ 336 (337)
|++...+++|++++++..|++.++++
T Consensus 394 da~~~~i~~G~~~~~~~~ia~~~l~~ 419 (428)
T 2wbi_A 394 ITRVLRLADGPDEVHLSAIATMELRD 419 (428)
T ss_dssp HHHHHTTTTSCHHHHHHHHHHHHHHH
T ss_pred HHhhcEecCChHHHHHHHHHHHHHHH
Confidence 99999999999999999999999875
No 30
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=1.2e-58 Score=429.07 Aligned_cols=325 Identities=22% Similarity=0.324 Sum_probs=287.7
Q ss_pred CccccccCCCCCccCCCCC-CCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHH--HhcCCHHHH---hhhchhhhcCc
Q 019707 1 MGNFNLHGITAPQEYGGLG-LGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQL--VRHGSPAQK---DKYLPKLISGE 74 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~-~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l--~~~g~~~~~---~~~l~~i~~g~ 74 (337)
|++.||+++.+|++|||.| .++.+.+.++|++++.|+++++.+.+|...+...+ ..+|+++|| ++|+|++.+|+
T Consensus 48 l~~~Gl~~~~~P~~~GG~g~~~~~~~~~~~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~qk~~~~~~l~~~~~g~ 127 (395)
T 3mxl_A 48 FAKLGLMGATVPAELGGLGLTRLYDVATALMRLAEADASTALAWHVQLSRGLTLTYEWQHGTPPVRAMAERLLRAMAEGE 127 (395)
T ss_dssp HHHHTGGGCSSCTTTTSCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHHSSCHHHHHHHHHHHHHHHHTS
T ss_pred HHHCCCcCcCCChhhCCCCCcCHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHHHhhcCCHHHHhHHHHHHHHHhcCC
Confidence 4688999999999999999 99999999999999999999998888764444443 367999999 99999999999
Q ss_pred ceeEEEecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccc
Q 019707 75 HVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQK 154 (337)
Q Consensus 75 ~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~ 154 (337)
.++++++|||++|+ ...+ ++++|||+|||+|.|+||+..||+++|+++++++++.+++++|+||++.|||++.+.
T Consensus 128 ~~~~~a~tEp~~~~--~~~~---t~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~~~~g~~~flV~~~~pGv~v~~~ 202 (395)
T 3mxl_A 128 AAVCGALKDAPGVV--TELH---SDGAGGWLLSGRKVLVSMAPIATHFFVHAQRRDDDGSVFLAVPVVHRDAPGLTVLDN 202 (395)
T ss_dssp CCEECCCSBCTTCC--CEEE---ECSSSCEEEEEEEEEETTGGGCSEECCCEEEECTTSCEEEECCCEETTCTTEEEECC
T ss_pred cEEEEEecCCCCCC--CceE---EecCCEEEEeeEEEEecCccccCEEEEEEEeCCCCCCCceEEEEEECCCCceEeCCC
Confidence 99999999998753 1122 237889999999999999999999999999976656668899999999999999999
Q ss_pred cccccCCCCcceeEEEceeeeCCCCccc--CCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCC
Q 019707 155 LDKLGMRGSDTCELVFENCFVPNENVLG--QEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLG 232 (337)
Q Consensus 155 ~~~~g~~~~~~~~v~f~~v~Vp~~~vl~--~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~ 232 (337)
|+.+||++++++++.||||+||++++|+ .++.++..........|+..++.++|+++++++.+++|++ ++|+.
T Consensus 203 ~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~ 277 (395)
T 3mxl_A 203 WDGLGMRASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSSITMLGIYAGIAQAARDIAVGFCA-----GRGGE 277 (395)
T ss_dssp CCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TTCSC
T ss_pred chhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCC
Confidence 9999999999999999999999999998 6666654444445568889999999999999999999998 45889
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC------CCCC------hhhhhHHHHHHHHHHHHHHHHHHHhhCCCccc
Q 019707 233 EFQFIQGKTADMYTALQSSRSYVYSVARDCDN------GKVD------PKDCAGVILCAAERATQVTLQAIQCLGGNGYV 300 (337)
Q Consensus 233 ~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~------~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~ 300 (337)
++|.+|++|+++..+++++|++++++++..+. ..+. ...++++|.++++.+.++++.++|++||.||+
T Consensus 278 ~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~~~~~a~~~~~~a~q~~Gg~g~~ 357 (395)
T 3mxl_A 278 PRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMMTPFQYAKMTVNELAPAVVDDCLSLVGGLAYT 357 (395)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGB
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHhChHhcc
Confidence 99999999999999999999999999988764 1111 14567789999999999999999999999999
Q ss_pred CcchHHHHHHhhccCc-ccCChHHHHHHHHHHHHHh
Q 019707 301 NEYATGRLLRDAKLYE-IGAGTSEIRRMIIGRALLK 335 (337)
Q Consensus 301 ~~~~~~r~~rd~~~~~-~~~g~~~~~~~~l~~~~~~ 335 (337)
+++|++|+|||++... +++|++++++..|++.+++
T Consensus 358 ~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lg 393 (395)
T 3mxl_A 358 AGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALG 393 (395)
T ss_dssp TTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSC
T ss_pred CCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhC
Confidence 9999999999999999 9999999999999999886
No 31
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=8.7e-58 Score=422.99 Aligned_cols=320 Identities=18% Similarity=0.232 Sum_probs=289.9
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|. .+...+..+++++||++|++ +|+.+.+++
T Consensus 44 l~~~Gl~~~~~P~~~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~~~a 119 (394)
T 2rfq_A 44 LQETGFFRLLQPEQWGGYQADPVLFYSAVRKIASACGSTGWVSSIIG-VHNWHLALFSQQAQEDVWGN---DTDVRISSS 119 (394)
T ss_dssp HHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHTTCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHSS---CTTCCEEEE
T ss_pred HHHCCCceecCchhhCCCCCCHHHHHHHHHHHHhhChhHHHHHHHHH-HHHHHHHhCCHHHHHHHhCC---CCCeEEEec
Confidence 46889999999999999999999999999999999999999887776 78889999999999999999 688889998
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
++ | .++|++++|||+|||+|.|+||+..||+++|+++++++++++++++|+||++ ||++.+.|+++|+
T Consensus 120 ~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~g~~~~~~~flV~~~--gv~v~~~~~~~G~ 187 (394)
T 2rfq_A 120 YA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPVIKDGRPVDFVSFLIPRE--DYRIDDVWNVVGL 187 (394)
T ss_dssp CS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEEETTEEEEEEEEEEEGG--GCEEECCCCBSSC
T ss_pred cC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEeeeecCCCCCCceeEEEEEhh--hcEEeCCcccccc
Confidence 87 3 5799999999999999999999999999999999842222347899999998 8999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccC--------CC----chHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh---
Q 019707 161 RGSDTCELVFENCFVPNENVLGQ--------EG----KGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQRE--- 225 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~--------~~----~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~--- 225 (337)
+++++++|.||||+||++++|+. ++ .++......+...|+..++.++|+++++++.+++|+++|.
T Consensus 188 ~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~ 267 (394)
T 2rfq_A 188 RGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTIHPTTISAPIVGMAYGAYDAHVEHQGKRVRAA 267 (394)
T ss_dssp GGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred ccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcCC
Confidence 99999999999999999999975 22 2343444556788999999999999999999999999999
Q ss_pred hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCC----hhhhhHHHHHHHHHHHHHHHHHHHhhCCC
Q 019707 226 QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCD----NGKVD----PKDCAGVILCAAERATQVTLQAIQCLGGN 297 (337)
Q Consensus 226 ~~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~----~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~G~~ 297 (337)
+||+|+.++|.+|++|+++...++++|++++.+++.++ .+.+. ...++++|.++++.+.++++.++|++||.
T Consensus 268 ~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~ 347 (394)
T 2rfq_A 268 FAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPFELRLRARRDQVRATGRAISSIDKLFESSGAT 347 (394)
T ss_dssp CTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhChh
Confidence 99999999999999999999999999999999999988 55432 24688999999999999999999999999
Q ss_pred cccCcchHHHHHHhhccCcccCC-hHHHHHHHHHHHHHhc
Q 019707 298 GYVNEYATGRLLRDAKLYEIGAG-TSEIRRMIIGRALLKQ 336 (337)
Q Consensus 298 ~~~~~~~~~r~~rd~~~~~~~~g-~~~~~~~~l~~~~~~~ 336 (337)
||++++|++|+|||++...+++| ++++++..+++.+++.
T Consensus 348 g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg~ 387 (394)
T 2rfq_A 348 ALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFGL 387 (394)
T ss_dssp GGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTTC
T ss_pred hhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHHHHhCC
Confidence 99999999999999999999999 9999999999998864
No 32
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=6.2e-58 Score=427.23 Aligned_cols=320 Identities=18% Similarity=0.229 Sum_probs=292.7
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++.+..|. .+...+..+|+++||++|+++ |+.+++++
T Consensus 72 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~~---g~~~~a~a 147 (422)
T 2jbr_A 72 LKEIGLHRAFQPKVYGGLEMSLPDFANCIVTLAGACAGTAWAFSLLC-THSHQIAMFSKQLQDEIWLKD---PDATASSS 147 (422)
T ss_dssp HHHTTGGGSSSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHH-HHHHHHTTSCHHHHHHHHTTC---TTCCEEEE
T ss_pred HHHCCchhcCCchhcCCCCCCHHHHHHHHHHHHhhCcCHHHHHHHHH-HHHHHHHhCCHHHHHHHHccC---CCeEEEee
Confidence 46899999999999999999999999999999999999998877775 788899999999999999997 88888988
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccccccccC
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQKLDKLGM 160 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~ 160 (337)
++ | .++|++++|||+|||+|.|+||+..||+++|+++++++++.+++++|+||++ ||++.+.|+++|+
T Consensus 148 ~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~g~~g~~~flV~~~--gv~v~~~~~~~G~ 215 (422)
T 2jbr_A 148 IA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRFDADGNKIYSFGVIPRS--DYEIVDNWYAQAI 215 (422)
T ss_dssp CS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEECTTSCEEEEEEEEEGG--GCEEECCCCBSSS
T ss_pred cC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEEEecCCCCCceeEEEEEEcC--ceEEeCCccccCc
Confidence 87 3 5789999999999999999999999999999999875445568899999998 8999999999999
Q ss_pred CCCcceeEEEceeeeCCCCcccCC--------Cch-----HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh--
Q 019707 161 RGSDTCELVFENCFVPNENVLGQE--------GKG-----VYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQRE-- 225 (337)
Q Consensus 161 ~~~~~~~v~f~~v~Vp~~~vl~~~--------~~g-----~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~-- 225 (337)
++++++++.||||+||++++|+.. +.| +......+...|+..++.++|+++++++.+++|+++|.
T Consensus 216 r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~ 295 (422)
T 2jbr_A 216 KSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRPYFASGFSAVSLGIAERMIEAFKEKQRNRVRA 295 (422)
T ss_dssp GGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHHHHTTHHHHHHHHHHHHHHHHHHHHHTTCBCT
T ss_pred CCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 999999999999999999999864 444 44455667788999999999999999999999999998
Q ss_pred hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCC----hhhhhHHHHHHHHHHHHHHHHHHHhhCCC
Q 019707 226 QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCD----NGKVD----PKDCAGVILCAAERATQVTLQAIQCLGGN 297 (337)
Q Consensus 226 ~~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~----~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~G~~ 297 (337)
+||+|+.++|.+|++|+++...++++|++++.+++.++ .+.+. ...++++|.++++.+.++++.++|++||.
T Consensus 296 ~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~ 375 (422)
T 2jbr_A 296 YTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNKETLAFWRTNQAYAVKMCIEAVDRLMAAAGAT 375 (422)
T ss_dssp TTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGG
T ss_pred CCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCHH
Confidence 99999999999999999999999999999999999988 55432 24688999999999999999999999999
Q ss_pred cccCcchHHHHHHhhccCcccCChH-HHHHHHHHHHHHhc
Q 019707 298 GYVNEYATGRLLRDAKLYEIGAGTS-EIRRMIIGRALLKQ 336 (337)
Q Consensus 298 ~~~~~~~~~r~~rd~~~~~~~~g~~-~~~~~~l~~~~~~~ 336 (337)
||++++|++|+|||++...+++|++ ++++..+++.+++.
T Consensus 376 g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg~ 415 (422)
T 2jbr_A 376 SFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGM 415 (422)
T ss_dssp GGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTTC
T ss_pred hhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHHHHhCC
Confidence 9999999999999999999999999 99999999999864
No 33
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=7.5e-58 Score=425.77 Aligned_cols=320 Identities=18% Similarity=0.200 Sum_probs=289.2
Q ss_pred CccccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEE
Q 019707 1 MGNFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALA 80 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~ 80 (337)
|++.||+++.+|++|||.|+++.+.+.++|++++.|+++++++..|. .+...|..+|+++||++|+| +|+.+++++
T Consensus 57 l~~~Gl~~l~~P~e~GG~g~~~~~~~~v~eela~~~~~~~~~~~~~~-~~~~~l~~~g~~~q~~~~l~---~g~~~~a~a 132 (414)
T 2or0_A 57 LRDSGAIRLLQPRLYGGYEVHPREFAETVMGVAALDGASGWVTGIVG-VHPWELAFADPQVQEEIWGE---DNDTWMASP 132 (414)
T ss_dssp HHHHTGGGTTSCGGGTCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHT-THHHHHTTSCHHHHHHHHSS---CTTCCEECC
T ss_pred HHHCCCchhcCchhhCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHH-HHHHHHHhCCHHHHHHHHcc---CCCeEEEec
Confidence 46889999999999999999999999999999999999999888886 78889999999999999999 699899988
Q ss_pred ecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCC---CeEEEEEeCCCCCeeec-cccc
Q 019707 81 MSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSK---GITAFIIEKGMPGFSTA-QKLD 156 (337)
Q Consensus 81 ~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~---~~~~flvp~~~~Gv~~~-~~~~ 156 (337)
++ | .++|++++|||+|||+|.|+||+..||+++|+++++++++.+ ++++|+||++ ||++. +.|+
T Consensus 133 ~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~g~~~~~g~~~flV~~~--gv~v~~~~~~ 200 (414)
T 2or0_A 133 YA-P---------MGVATPVDGGYVLKGRWSFSSGTDHCQWAFLGAMVGDGEGGIATPSSLHVILPRT--DYQIVEDTWD 200 (414)
T ss_dssp CS-C---------CEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEECC-----CCCSEEEEEEEGG--GCEEETTCCC
T ss_pred cC-C---------CceeEEECCeEEEEeeEeccCCCchhhEEEEEEEecCCCCCcccceeEEEEEEhh--hcEEecCCCc
Confidence 87 4 579999999999999999999999999999999987543444 8899999997 89998 8999
Q ss_pred cccCCCCcceeEEEceeeeCCCCcccCC--------C----chHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019707 157 KLGMRGSDTCELVFENCFVPNENVLGQE--------G----KGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQR 224 (337)
Q Consensus 157 ~~g~~~~~~~~v~f~~v~Vp~~~vl~~~--------~----~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r 224 (337)
++|++++++++|.||||+||++++|+.. + .|+......+...|+..++.++|+++.+++.+++|+++|
T Consensus 201 ~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R 280 (414)
T 2or0_A 201 VIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMPYSCMFPLGITAAVIGITEGALACHIAVQKDR 280 (414)
T ss_dssp BSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred cccCcccCCCcEEEccEEecHHHeeccccccccCCCccccCCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999752 1 233344455678899999999999999999999999999
Q ss_pred hhc-CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc----CCCCC----hhhhhHHHHHHHHHHHHHHHHHHHhhC
Q 019707 225 EQF-GRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCD----NGKVD----PKDCAGVILCAAERATQVTLQAIQCLG 295 (337)
Q Consensus 225 ~~~-g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~----~~~~~----~~~~~~~k~~~~~~~~~~~~~~~~~~G 295 (337)
.+| |+|+.++|.+|++|+++...++++|++++.+++.++ .+.+. ...++++|.++++.+.++++.++|++|
T Consensus 281 ~~f~G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~~~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~G 360 (414)
T 2or0_A 281 VAITGQKIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDAGKEITFEERAIGRRTQIAAAWRAVRAADEIFARAG 360 (414)
T ss_dssp BCTTSCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC
T ss_pred CCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhC
Confidence 999 999999999999999999999999999999999988 55432 246889999999999999999999999
Q ss_pred CCcccCcchHHHHHHhhccCcccCC-hHHHHHHHHHHHHHhc
Q 019707 296 GNGYVNEYATGRLLRDAKLYEIGAG-TSEIRRMIIGRALLKQ 336 (337)
Q Consensus 296 ~~~~~~~~~~~r~~rd~~~~~~~~g-~~~~~~~~l~~~~~~~ 336 (337)
|.||++++|++|+|||++...+++| ++++++..+++.+++.
T Consensus 361 g~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg~ 402 (414)
T 2or0_A 361 GGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLGG 402 (414)
T ss_dssp GGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTTC
T ss_pred hHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhCC
Confidence 9999999999999999999999999 9999999999998864
No 34
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=5.1e-57 Score=423.22 Aligned_cols=326 Identities=22% Similarity=0.341 Sum_probs=283.4
Q ss_pred CccccccCCCCCccCCCCC-CCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHH--HHhcCCHHH---HhhhchhhhcCc
Q 019707 1 MGNFNLHGITAPQEYGGLG-LGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQ--LVRHGSPAQ---KDKYLPKLISGE 74 (337)
Q Consensus 1 l~~~Gl~~l~~p~~~GG~~-~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~--l~~~g~~~~---~~~~l~~i~~g~ 74 (337)
|++.||+++.+|++|||.| .++.+.+.++|++++.|+++++.+.+|......+ +..+|+++| |++||+++.+|+
T Consensus 59 l~~~Gl~~l~~P~~~GG~gl~~~~~~~~v~eel~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~q~~~k~~~l~~l~~g~ 138 (439)
T 3m9v_A 59 LRKDGLMGATVPAELGGLGVDRLYDVAVALLAVARADASTALALHMQLSRGLTLGYEWRHGDERARTLAERILRGMVAGD 138 (439)
T ss_dssp HHHTTGGGTTSCGGGTSCCCCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHSCHHHHHHHHHHHHHHHHTC
T ss_pred HHHCCCccCCCChhhCCCCCCCHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999999 8999999999999999999999887775333333 346799999 999999999999
Q ss_pred ceeEEEecCCCCCCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeCCCCCeeeccc
Q 019707 75 HVGALAMSEPNAGSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEKGMPGFSTAQK 154 (337)
Q Consensus 75 ~~~~~~~te~~~gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~~~~Gv~~~~~ 154 (337)
.++++++|||+++ ..... ++++|||+|||+|+|+||+.+||+++|+++++++++.+++++|+||++.|||++.+.
T Consensus 139 ~~~~~a~tEp~~~--~~~~~---t~~~~g~vlnG~K~~~s~a~~Ad~~~v~art~~~~~~~g~~~flVp~~~pGv~i~~~ 213 (439)
T 3m9v_A 139 AVVCSGIKDHHTA--VTTLR---PDGAGGWLLSGRKTLVSMAPVGTHFVINARTDGTDGPPRLASPVVTRDTPGFTVLDN 213 (439)
T ss_dssp CCEEEECEECTTC--CCEEE---ECSSSCEEEEEEEEEETTGGGCSEEEECEEECC--CCCCEEEEEEETTCTTEEECCC
T ss_pred ceEEEeecCCCCC--CCcee---eccCCEEEEEeEEEeecCccccCEEEEEEEecCCCCCceeEEEEEECCCCCeEECCC
Confidence 9999999999854 22222 237889999999999999999999999999976656678999999999999999999
Q ss_pred cccccCCCCcceeEEEceeeeCCCCccc--CCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCC
Q 019707 155 LDKLGMRGSDTCELVFENCFVPNENVLG--QEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLG 232 (337)
Q Consensus 155 ~~~~g~~~~~~~~v~f~~v~Vp~~~vl~--~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~ 232 (337)
|+.+|++++++++|+||||+||++++|+ ..+.++.........+|+.+++.++|+++++++.+++|++ ++|+.
T Consensus 214 ~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~G~a~~al~~a~~~a~-----~r~i~ 288 (439)
T 3m9v_A 214 WDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVYVGVAQAAYDTAVAALE-----RRPEP 288 (439)
T ss_dssp CCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGGGHHHHHHHHHHHHHHHHHHHH-----TCSSC
T ss_pred cccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHHHHHHHHHHHHHHHHHHHHHHHHc-----CCCCC
Confidence 9999999999999999999999999998 6665544333334557889999999999999999999999 45789
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC------------CCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCccc
Q 019707 233 EFQFIQGKTADMYTALQSSRSYVYSVARDCDNG------------KVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYV 300 (337)
Q Consensus 233 ~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~~------------~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~ 300 (337)
++|.+|++|+++..+++++|++++++++..+.. ......++++|.++++.+.++++.++|++||.||+
T Consensus 289 ~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ak~~a~~~a~~v~~~a~q~~Gg~G~~ 368 (439)
T 3m9v_A 289 PQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQCAKLAVNRLAPEIVSDCLSLVGGASYT 368 (439)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGS
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHHhc
Confidence 999999999999999999999999988776531 01123466789999999999999999999999999
Q ss_pred CcchHHHHHHhhccCc-ccCChHHHHHHHHHHHHHhc
Q 019707 301 NEYATGRLLRDAKLYE-IGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 301 ~~~~~~r~~rd~~~~~-~~~g~~~~~~~~l~~~~~~~ 336 (337)
+++|++|+|||+++.. +|+|+++++++.+++.+++.
T Consensus 369 ~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~ 405 (439)
T 3m9v_A 369 AGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGI 405 (439)
T ss_dssp TTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC
T ss_pred CCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCC
Confidence 9999999999999999 99999999999999998874
No 35
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=4.7e-53 Score=402.16 Aligned_cols=321 Identities=23% Similarity=0.357 Sum_probs=291.0
Q ss_pred CccccccCCCC--CccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcc---
Q 019707 1 MGNFNLHGITA--PQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEH--- 75 (337)
Q Consensus 1 l~~~Gl~~l~~--p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~--- 75 (337)
|++.||+++.+ |++|||.+. .......++..+...+....++. .+...|..++ ++||++|+|++.+|+.
T Consensus 95 l~e~Gl~~l~~~~p~~~Gg~~~----~~~~~~~~~~~~~~~~~p~~~t~-~~~~~L~~~g-~eqk~~~lp~l~sge~~p~ 168 (541)
T 3djl_A 95 LCTNRVHNLAWEEDARSGAFVA----RAARFMLHAQVEAGSLCPITMTF-AATPLLLQML-PAPFQDWTTPLLSDRYDSH 168 (541)
T ss_dssp HHHTTTTTGGGSTTCCTTHHHH----HHHHHHHHHHHCSTTHHHHHHHH-HHHHHHHHHC-CGGGGGGHHHHTCSCCCCC
T ss_pred HHhCCcccCCCCCCCCCCcHHH----HHHHHHHHHHHHHhhhcHHHHHH-HHHHHHHHcC-HHHHHHHHHHHhCCCcccc
Confidence 36789999999 799995433 33334444445666666656776 6778888899 9999999999999998
Q ss_pred ----------eeEEEecCCCCCCCcCCcEeEEEEe-CCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCCCCeEEEEEeC
Q 019707 76 ----------VGALAMSEPNAGSDVVGMKCKADRV-DGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGSKGITAFIIEK 144 (337)
Q Consensus 76 ----------~~~~~~te~~~gs~~~~~~~~a~~~-~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~~~~~~flvp~ 144 (337)
++++++|||++|||....+|+|+++ +|+|+|||.|+|+| +.+||+++|+|+++ +++++|+||+
T Consensus 169 ~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~Ad~~lVlArt~-----~Gis~flVp~ 242 (541)
T 3djl_A 169 LLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQSDAHLVLAQTA-----GGLSCFFVPR 242 (541)
T ss_dssp SSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTSSEEEEEEEET-----TEEEEEEEES
T ss_pred cccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-ccccCEEEEEEEEC-----CceEEEEEec
Confidence 7899999999999999999999999 78899999999999 89999999999985 4799999999
Q ss_pred CCC-----CeeeccccccccCCCCcceeEEEceeeeCCCCcccCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHH
Q 019707 145 GMP-----GFSTAQKLDKLGMRGSDTCELVFENCFVPNENVLGQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLP 219 (337)
Q Consensus 145 ~~~-----Gv~~~~~~~~~g~~~~~~~~v~f~~v~Vp~~~vl~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~ 219 (337)
+.| ||++.+.|+++|++++++++++|+||+ ++++|.++.|+..+...+...|+..++.++|+++++++.+++
T Consensus 243 ~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~---~~llG~~g~G~~~~~~~l~~~Rl~~aa~~~G~a~~al~~a~~ 319 (541)
T 3djl_A 243 FLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAI---GWLLGLEGEGIRLILKMGGMTRFDCALGSHAMMRRAFSLAIY 319 (541)
T ss_dssp BCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEE---EEEESSTTCHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCcCCeEEeeccccCCCcCCceeEEEEccce---eeeeecCCchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998 999999999999999999999999996 889999999999999999999999999999999999999999
Q ss_pred HHHhhhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC------hhhhhHHHHHHHHHHHHHHHHHHHh
Q 019707 220 YVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD------PKDCAGVILCAAERATQVTLQAIQC 293 (337)
Q Consensus 220 ~~~~r~~~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~~~~~------~~~~~~~k~~~~~~~~~~~~~~~~~ 293 (337)
|+++|.++|+|+.++|.+|++|+++..++++++++++++++.++...+. ...++++|.++++.+.++++.++++
T Consensus 320 ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~~~~~~aK~~ase~a~~~~~~a~q~ 399 (541)
T 3djl_A 320 HAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWARLFTPAAKFVICKRGMPFVAEAMEV 399 (541)
T ss_dssp HHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999876432 2457789999999999999999999
Q ss_pred hCCCcccCcchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 019707 294 LGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 294 ~G~~~~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~l~~~~~~~ 336 (337)
+||.||.+++|++|+|||++...+++|++++++..++|.++++
T Consensus 400 ~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~~~ 442 (541)
T 3djl_A 400 LGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQ 442 (541)
T ss_dssp HGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHC
T ss_pred hCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHHhC
Confidence 9999999999999999999999999999999999999998865
No 36
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=6e-52 Score=404.19 Aligned_cols=325 Identities=18% Similarity=0.220 Sum_probs=284.5
Q ss_pred cccccCCCCCccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEEec
Q 019707 3 NFNLHGITAPQEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMS 82 (337)
Q Consensus 3 ~~Gl~~l~~p~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~~t 82 (337)
+.|++. .+|++|| .+..+...+.|++ +.+++ +..|..++...|..+|+++|+++|||++.+|+.++|+++|
T Consensus 68 ~~g~l~-~~p~e~G---~~~~~~~~v~e~~---~~~~~--~~~~~~l~~~~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~T 138 (659)
T 1w07_A 68 KCAHAF-KRIIELR---LNEEEAGRLRHFI---DQPAY--VDLHWGMFVPAIKGQGTEEQQKKWLSLANKMQIIGCYAQT 138 (659)
T ss_dssp HHHHHH-HHHHHTT---CCHHHHHHHHHHH---CCCCH--HHHHHHTHHHHHHHHSCHHHHHHHHHHHHTTSSCEEEECC
T ss_pred HHHHHH-HhHHHhC---CCchHHHHHHHHh---ccchh--hhhHHhHHHHHHHHcCCHHHHHHHhhHHhcCCEEEEEEec
Confidence 345554 4788888 4566766665554 55555 5677557788999999999999999999999999999999
Q ss_pred CCCCCCCcCCcEeEEEEe--CCeEEEe-----eeeEeeeC-CCCCCEEEEEEEeCCCCCCCCeEEEEEeC-C------CC
Q 019707 83 EPNAGSDVVGMKCKADRV--DGGYIIN-----GNKMWCTN-GPVAQTLVVYAKTDIKAGSKGITAFIIEK-G------MP 147 (337)
Q Consensus 83 e~~~gs~~~~~~~~a~~~--~~g~~l~-----G~k~~~s~-~~~ad~~lv~a~~~~~~~~~~~~~flvp~-~------~~ 147 (337)
||++|||...++|+|+++ +|||+|| |.|+|+|| +..||+++|+|++.+++++.++++|+||. + .|
T Consensus 139 Ep~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV~Ar~~~~~~~~G~~~flVp~r~~~~~~~~p 218 (659)
T 1w07_A 139 ELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVVYARLITNGKDYGIHGFIVQLRSLEDHSPLP 218 (659)
T ss_dssp BTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCT
T ss_pred CCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEEEEEECCCCCCCCeEEEEEEccccCCCCCCC
Confidence 999999999999999998 6889999 99999999 79999999999986543445789999995 4 69
Q ss_pred Ceeecccccccc---CCCCcceeEEEceeeeCCCCcccC------CCchH------HHHHHhhhHHHHHHHHHHHHHHHH
Q 019707 148 GFSTAQKLDKLG---MRGSDTCELVFENCFVPNENVLGQ------EGKGV------YVMMSGLDLERLVLAAGPLGIMQA 212 (337)
Q Consensus 148 Gv~~~~~~~~~g---~~~~~~~~v~f~~v~Vp~~~vl~~------~~~g~------~~~~~~~~~~~~~~~a~~~G~~~~ 212 (337)
||++.+.|+++| +++++++.+.|+||+||.+++|+. .+.++ ......+..+|+..++.++|+++.
T Consensus 219 GV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~ 298 (659)
T 1w07_A 219 NITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREGEYVPSDVPKQLVYGTMVYVRQTIVADASNALSR 298 (659)
T ss_dssp TEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTCCEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHH
T ss_pred CeEEecCccCccccccCCCCceEEEeccEEECHHHhcCCcCccCCCCceecCCccHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999 999999999999999999999985 44433 234456788999999999999999
Q ss_pred HHHHHHHHHHhhhhcCC-------CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhc-------CCCC-----Chhhhh
Q 019707 213 CLDVVLPYVRQREQFGR-------PLGEFQFIQGKTADMYTALQSSRSYVYSVARDCD-------NGKV-----DPKDCA 273 (337)
Q Consensus 213 al~~a~~~~~~r~~~g~-------~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~-------~~~~-----~~~~~~ 273 (337)
+++.+++|++.|.+||. |+.++|.+|++|+++.+.+++++++.+.+++.++ .+.+ ....++
T Consensus 299 al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~~~a~~~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a 378 (659)
T 1w07_A 299 AVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFRFVGEWLKWLYTDVTERLAASDFATLPEAHACTA 378 (659)
T ss_dssp HHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHH
T ss_pred HHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHH
Confidence 99999999999999997 8999999999999999999999999999887653 3332 245688
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 019707 274 GVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 274 ~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~l~~~~~~~ 336 (337)
++|.++++.+.++++.++++|||.||++++|++|+|||++...+++|++++++..+++.++++
T Consensus 379 ~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~v~~~~iar~lL~~ 441 (659)
T 1w07_A 379 GLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEGDNVVLQLQVARFLMKT 441 (659)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTGGGGGBGGGSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCcccccccCHHHHHHhcceeEEEeCChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999874
No 37
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=3e-50 Score=391.63 Aligned_cols=319 Identities=18% Similarity=0.197 Sum_probs=274.7
Q ss_pred ccCCCCCCCHHHHHHHHHHHHhccCchhhHhhhhhhhHHHHHHhcCCHHHHhhhchhhhcCcceeEEEecCCCCCCCcCC
Q 019707 13 QEYGGLGLGYLYHCIAMEEISRASGSVGLSYGAHSNLCINQLVRHGSPAQKDKYLPKLISGEHVGALAMSEPNAGSDVVG 92 (337)
Q Consensus 13 ~~~GG~~~~~~~~~~~~e~la~~~~~~a~~~~~~~~~~~~~l~~~g~~~~~~~~l~~i~~g~~~~~~~~te~~~gs~~~~ 92 (337)
++|||.+ ..+. .+++++... +++..+..|..++...|..+|+++|+++|||++.+|+.++|+++|||++|||...
T Consensus 75 ~~~~~~~--~~~~-~~~~~~~~~--~~~~~~~~h~~l~~~~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~ 149 (661)
T 2ddh_A 75 REYGISD--PEEI-MWFKNSVHR--GHPEPLDLHLGMFLPTLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRG 149 (661)
T ss_dssp HHTTCCC--HHHH-HHHHHHHHT--TCCCTTHHHHHTHHHHHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGG
T ss_pred HHcCCCC--chHH-HHHHHHhcc--chhhHHHHHHHHHHHHHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCccc
Confidence 5677765 3333 336666543 3345566776578889999999999999999999999999999999999999999
Q ss_pred cEeEEEEe--CCeEEEe-----eeeEeeeC-CCCCCEEEEEEEeCCCCCCCCeEEEEEeC-C------CCCeeecccccc
Q 019707 93 MKCKADRV--DGGYIIN-----GNKMWCTN-GPVAQTLVVYAKTDIKAGSKGITAFIIEK-G------MPGFSTAQKLDK 157 (337)
Q Consensus 93 ~~~~a~~~--~~g~~l~-----G~k~~~s~-~~~ad~~lv~a~~~~~~~~~~~~~flvp~-~------~~Gv~~~~~~~~ 157 (337)
++|+|+++ +|||+|| |.|+|+|| +..||+++|+|++..+++..++++|+||. + .|||++.+.|++
T Consensus 150 l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV~Ar~~~~~~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k 229 (661)
T 2ddh_A 150 LETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIVLAQLITQGECYGLHAFVVPIREIGTHKPLPGITVGDIGPK 229 (661)
T ss_dssp CCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEEEEEEEETTEEEEEEEEEEECBCTTTCCBCTTEEEEECCCC
T ss_pred ceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEEEEEEccCCCCCceEEEEEecccccCCCCCCCeEEecCccc
Confidence 99999998 7899999 99999999 78999999999986543456789999995 4 799999999999
Q ss_pred ccCCCCcceeEEEceeeeCCCCcccCC------Cch-----HHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhh
Q 019707 158 LGMRGSDTCELVFENCFVPNENVLGQE------GKG-----VYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQREQ 226 (337)
Q Consensus 158 ~g~~~~~~~~v~f~~v~Vp~~~vl~~~------~~g-----~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~ 226 (337)
+|+++++++.+.|+||+||.+++|+.. +.+ +......+..+|+..++.++|+++.+++.+++|++.|.+
T Consensus 230 ~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~q 309 (661)
T 2ddh_A 230 FGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYVKPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQ 309 (661)
T ss_dssp SSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEECCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBC
T ss_pred ccCCCCcceEEEeccEEECHHHhcCcccccCCCCceeccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcc
Confidence 999999999999999999999999874 322 455666678899999999999999999999999999999
Q ss_pred cCC-------CCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-------CCC-----ChhhhhHHHHHHHHHHHHHH
Q 019707 227 FGR-------PLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN-------GKV-----DPKDCAGVILCAAERATQVT 287 (337)
Q Consensus 227 ~g~-------~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~-------~~~-----~~~~~~~~k~~~~~~~~~~~ 287 (337)
||. |+.++|.+|++|+++.+.+++++.+++.+++.+++ +.+ ....++++|.++++.+.+++
T Consensus 310 fg~~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~ 389 (661)
T 2ddh_A 310 SEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGRYMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGI 389 (661)
T ss_dssp SCSSTTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHH
Confidence 987 89999999999999999999999999999988753 221 23568899999999999999
Q ss_pred HHHHHhhCCCcccCcchHHHHHHhhccCcccCChHHHHHHHHHHHHHhc
Q 019707 288 LQAIQCLGGNGYVNEYATGRLLRDAKLYEIGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 288 ~~~~~~~G~~~~~~~~~~~r~~rd~~~~~~~~g~~~~~~~~l~~~~~~~ 336 (337)
+.|+++|||.||+.++|++|+|||++...+++|++++++..+++.++++
T Consensus 390 ~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~vl~~~iar~lL~~ 438 (661)
T 2ddh_A 390 EECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTVMMLQTARFLMKI 438 (661)
T ss_dssp HHHHHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhCcccccccCcHHHHHHhcceeeEecCchHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999875
No 38
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=4e-40 Score=309.77 Aligned_cols=308 Identities=12% Similarity=0.103 Sum_probs=233.6
Q ss_pred CHHHHHHHHHHHHhccCch-hhHhh----hhhh-hHHHHHHhcCC--HHHHhhhchhhhcCcceeEEEecCCCCC-----
Q 019707 21 GYLYHCIAMEEISRASGSV-GLSYG----AHSN-LCINQLVRHGS--PAQKDKYLPKLISGEHVGALAMSEPNAG----- 87 (337)
Q Consensus 21 ~~~~~~~~~e~la~~~~~~-a~~~~----~~~~-~~~~~l~~~g~--~~~~~~~l~~i~~g~~~~~~~~te~~~g----- 87 (337)
++....+.++.++..+.+. +.+.. .... ....++..+|+ ++||++|||++++|++++++++|||+.+
T Consensus 81 dL~~~~~~~~lw~~~~~g~~grs~~~~~~n~~~~~~~~~~~~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~ 160 (490)
T 1u8v_A 81 DLRKKVKMQRLLGQKTASCFQRCVGMDAFNAVFSTTYEIDQKYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAP 160 (490)
T ss_dssp HHHHHHHHHHHHHHHHSSCCCTHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCG
T ss_pred HHHHHHHHHHHHHhhCCCcCcCCccHHHHHHHHHHHHhHHHHhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccc
Confidence 4455667777777765322 32211 1110 11234568999 9999999999999999999999999864
Q ss_pred ---CCc-CCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCC-CCCCCeEEEEEeCCCCCeeecc---cccc--
Q 019707 88 ---SDV-VGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIK-AGSKGITAFIIEKGMPGFSTAQ---KLDK-- 157 (337)
Q Consensus 88 ---s~~-~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~-~~~~~~~~flvp~~~~Gv~~~~---~~~~-- 157 (337)
||+ ...+ ++++++|||+|||+|+|+||+..||+++|+++++.+ +..+..++|+||++.|||++.+ .++.
T Consensus 161 ~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad~~iV~art~~~~~~~~~~s~flVp~d~pGv~v~~~r~~~~~~~ 239 (490)
T 1u8v_A 161 SAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSHEHIIMPTIAMTEADKDYAVSFACPSDADGLFMIYGRQSCDTRK 239 (490)
T ss_dssp GGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCSEEEECCSSCCCGGGGGGCEEEEEETTCTTEEEEECCCTTGGGG
T ss_pred cccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccCEEEEEEecCCCCCCCCeEEEEEEECCCCCEEEEeccccccccc
Confidence 664 3344 889999999999999999999999999999998532 2234589999999999999953 3443
Q ss_pred --------ccC-CC-CcceeEEEceeeeCCCCcc--cCCCchHHHHHHhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 019707 158 --------LGM-RG-SDTCELVFENCFVPNENVL--GQEGKGVYVMMSGLDLERLVLAAGPLGIMQACLDVVLPYVRQRE 225 (337)
Q Consensus 158 --------~g~-~~-~~~~~v~f~~v~Vp~~~vl--~~~~~g~~~~~~~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~ 225 (337)
+|+ +. ..++.|.||||+||++++| |..+.++......+...|+..+++++|.++.++..+......
T Consensus 240 ~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g~~~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~~-- 317 (490)
T 1u8v_A 240 MEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQEYDFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAADY-- 317 (490)
T ss_dssp GSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEESCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred ccccccCCccccccCCceEEEEECceEeCHHHccCCCChhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh--
Confidence 566 53 5678899999999999998 777777777667777888888777777777777766554432
Q ss_pred hcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC--CChhhhhHHHHHHHHHHHHHHHHHHHhhCCCccc
Q 019707 226 QFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN---GK--VDPKDCAGVILCAAERATQVTLQAIQCLGGNGYV 300 (337)
Q Consensus 226 ~~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~---~~--~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~ 300 (337)
+ ++.++|.||++|+++...++++|++++++++..+. +. +....++++|+++++.+.++++.++|++||.+++
T Consensus 318 -~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~ 394 (490)
T 1u8v_A 318 -N--GAQKASHVKDKLIEMTHLNETLYCCGIACSAEGYPTAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVT 394 (490)
T ss_dssp -H--TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHH
T ss_pred -c--CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhc
Confidence 2 38899999999999999999999999999999874 22 4466899999999999999999999999999997
Q ss_pred CcchHHHHHHhh-----------------ccCcccCChHHHHHHH-HHHHHHhc
Q 019707 301 NEYATGRLLRDA-----------------KLYEIGAGTSEIRRMI-IGRALLKQ 336 (337)
Q Consensus 301 ~~~~~~r~~rd~-----------------~~~~~~~g~~~~~~~~-l~~~~~~~ 336 (337)
+|.+|.|||. .......++.+..+.. +++.+..+
T Consensus 395 --~p~er~~rd~~~~~~~~~~~~~~l~~~~~g~~~~~~~dr~~~~rl~~~~~~s 446 (490)
T 1u8v_A 395 --MPSEADFKSETVVGRDGETIGDFCNKFFAAAPTCTTEERMRVLRFLENICLG 446 (490)
T ss_dssp --CCCHHHHTCCCBCSTTSCBHHHHHHHHTCCSTTSCHHHHHHHHHHHHHHHTS
T ss_pred --ChHHHHHhCchhccccchhHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhcC
Confidence 4555555544 4444444454555443 77666543
No 39
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=5.2e-40 Score=308.60 Aligned_cols=264 Identities=16% Similarity=0.198 Sum_probs=219.2
Q ss_pred CHHHHhhhchhhhcCcceeEEEecCCCCC--------CCcCCcEeEE-EEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeC
Q 019707 59 SPAQKDKYLPKLISGEHVGALAMSEPNAG--------SDVVGMKCKA-DRVDGGYIINGNKMWCTNGPVAQTLVVYAKTD 129 (337)
Q Consensus 59 ~~~~~~~~l~~i~~g~~~~~~~~te~~~g--------s~~~~~~~~a-~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~ 129 (337)
.++||++|||++++|+.+.++++|||+.| ||+. ..+++ ++++|||+|||.|+|+|| +.||+++|+++++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 47999999999999999999999999976 5554 45555 478999999999999999 9999999999986
Q ss_pred CC-CCCCCeEEEEEeCCCCCeeecc--cccc--------ccCCC-CcceeEEEceeeeCCCCcc--cCCCchHHHH--HH
Q 019707 130 IK-AGSKGITAFIIEKGMPGFSTAQ--KLDK--------LGMRG-SDTCELVFENCFVPNENVL--GQEGKGVYVM--MS 193 (337)
Q Consensus 130 ~~-~~~~~~~~flvp~~~~Gv~~~~--~~~~--------~g~~~-~~~~~v~f~~v~Vp~~~vl--~~~~~g~~~~--~~ 193 (337)
++ +..++.++|+||++.|||++.+ .+.. +|++. ..+++|.||||+||++++| |..+.++... ..
T Consensus 200 ~~~~~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~~~ 279 (481)
T 2yyk_A 200 LQAGSEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGATG 279 (481)
T ss_dssp CCTTCGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHHHT
T ss_pred CCCCCCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHHhh
Confidence 42 2334689999999999999953 3332 45564 6778999999999999998 6665555444 56
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC--CC
Q 019707 194 GLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN---GK--VD 268 (337)
Q Consensus 194 ~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~---~~--~~ 268 (337)
++..+|+..++..+|.++.++..+..++.. + ++.++|.||++|+++.+.++++|++++++++..+. +. +.
T Consensus 280 ~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~~~ 354 (481)
T 2yyk_A 280 ALNHMAHQVVALKTAKTEAFLGVAALMAEG---I--GADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLVPD 354 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T--TGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEECC
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c--ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcCcc
Confidence 678899999999999999999999887764 2 48999999999999999999999999999999863 22 44
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHhhc-------cCcccCChHHHHHHHHHHHH
Q 019707 269 PKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGRLLRDAK-------LYEIGAGTSEIRRMIIGRAL 333 (337)
Q Consensus 269 ~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd~~-------~~~~~~g~~~~~~~~l~~~~ 333 (337)
...++++|+++++.+.++++.++|++||.++. .|.+|.| |.+ .+... |++++++..|.|.+
T Consensus 355 ~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i~~~l~~~l~~~-g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 355 RGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPLGPFLEKFLQGA-ALEAKERVALFRLA 422 (481)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTTHHHHHHHSCBT-TBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-ChhhhHHHHHHHhcC-CCCHHHHHHHHHHH
Confidence 66899999999999999999999999997776 8888888 883 33333 88888888888643
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=100.00 E-value=3.4e-35 Score=275.59 Aligned_cols=239 Identities=13% Similarity=0.142 Sum_probs=189.6
Q ss_pred cCC--HHHHhhhchhhhcCcceeEEEecCCCC--------CCCcCCcEeEEEEeCCeEEEeeeeEeeeCCCCCCEEEEEE
Q 019707 57 HGS--PAQKDKYLPKLISGEHVGALAMSEPNA--------GSDVVGMKCKADRVDGGYIINGNKMWCTNGPVAQTLVVYA 126 (337)
Q Consensus 57 ~g~--~~~~~~~l~~i~~g~~~~~~~~te~~~--------gs~~~~~~~~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a 126 (337)
+++ .+|+++|||++++|++++++++|||+. |||+ ..++ ..+++|||+|||.|.|+||+..||+++|++
T Consensus 127 ~~~~~~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a 204 (515)
T 3hwc_A 127 EGRNLTQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGC 204 (515)
T ss_dssp TTCCHHHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECC
T ss_pred cCCCHHHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEE
Confidence 554 578899999999999999999999986 4676 4443 345689999999999999999999999999
Q ss_pred EeCC-CCCCCCeEEEEEeCCCCCeeeccccccccC-----CC-----CcceeEEEceeeeCCCCcc--cCCCchHHHHHH
Q 019707 127 KTDI-KAGSKGITAFIIEKGMPGFSTAQKLDKLGM-----RG-----SDTCELVFENCFVPNENVL--GQEGKGVYVMMS 193 (337)
Q Consensus 127 ~~~~-~~~~~~~~~flvp~~~~Gv~~~~~~~~~g~-----~~-----~~~~~v~f~~v~Vp~~~vl--~~~~~g~~~~~~ 193 (337)
++.+ .+++. +++|+||++.|||++.+.|...|. +. ..++.|.||||+||++++| |.++.|+..+..
T Consensus 205 ~t~~~~~~~~-~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~ 283 (515)
T 3hwc_A 205 LYRPGIPGEQ-VIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQR 283 (515)
T ss_dssp CCCTTCCGGG-CEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHH
T ss_pred EecCCCCCCe-EEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHH
Confidence 8732 22333 899999999999999877776652 22 2378899999999999999 888888765533
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC---CC--CC
Q 019707 194 GLDLERLVLAAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN---GK--VD 268 (337)
Q Consensus 194 ~~~~~~~~~~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~---~~--~~ 268 (337)
.+...+....+..+|.+..++..+..++.. + ++.++|.||++|++|.+.++++|++++++++..+. +. +.
T Consensus 284 ~~~~~~r~~~~~~~~~a~~~lG~A~~~~e~---~--gI~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~ 358 (515)
T 3hwc_A 284 IFDWVHYHILIRQVLRAELIVGLAILITEH---I--GTSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPN 358 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---H--TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---c--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCC
Confidence 333332222245566666666655554432 2 38999999999999999999999999999998874 22 56
Q ss_pred hhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcc
Q 019707 269 PKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEY 303 (337)
Q Consensus 269 ~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~ 303 (337)
...++++|+++++.+.++++.++|++||.+++..+
T Consensus 359 ~~~as~AK~~ase~~~rv~~~a~qi~GG~~i~~Ps 393 (515)
T 3hwc_A 359 PLIYDFGRAHFLQNQMSVMYELLDLAGRSSLMIPS 393 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGTSCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHcCCCeeeCCC
Confidence 67899999999999999999999999999998543
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=100.00 E-value=4.5e-31 Score=248.08 Aligned_cols=244 Identities=11% Similarity=0.022 Sum_probs=198.7
Q ss_pred HHHhhhchhhhcCcceeEEEecCCCCC-----CCcCCcEe-EEEEeCCeEEEeeeeEeeeCCCCCCEEEEEEEeCCCCCC
Q 019707 61 AQKDKYLPKLISGEHVGALAMSEPNAG-----SDVVGMKC-KADRVDGGYIINGNKMWCTNGPVAQTLVVYAKTDIKAGS 134 (337)
Q Consensus 61 ~~~~~~l~~i~~g~~~~~~~~te~~~g-----s~~~~~~~-~a~~~~~g~~l~G~k~~~s~~~~ad~~lv~a~~~~~~~~ 134 (337)
+...+|+..+..+++..+.++++|... +...++.. ..+++++||+|||.|.|+||++.||+++|++++.++.+.
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~~~ 213 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGIPG 213 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTCCG
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCCCc
Confidence 456789999999999999999999732 11122222 357788999999999999999999999999988766566
Q ss_pred CCeEEEEEeCCCCCeeeccccccccCCC----------CcceeEEEceeeeCCCCcc--cCCCchHHHHHHhhhHHHHHH
Q 019707 135 KGITAFIIEKGMPGFSTAQKLDKLGMRG----------SDTCELVFENCFVPNENVL--GQEGKGVYVMMSGLDLERLVL 202 (337)
Q Consensus 135 ~~~~~flvp~~~~Gv~~~~~~~~~g~~~----------~~~~~v~f~~v~Vp~~~vl--~~~~~g~~~~~~~~~~~~~~~ 202 (337)
++.++|+||.++|||+++......+.+. ...+.|+||||+||+++|| |+++.+.......+.+.+...
T Consensus 214 d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~~~~ 293 (517)
T 4g5e_A 214 DQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLHYHA 293 (517)
T ss_dssp GGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHHHHH
T ss_pred cceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHHHHH
Confidence 7789999999999999975554444332 2246799999999999987 888888777777788888888
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhcCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CCChhhhhHHHH
Q 019707 203 AAGPLGIMQACLDVVLPYVRQREQFGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNG-----KVDPKDCAGVIL 277 (337)
Q Consensus 203 ~a~~~G~~~~al~~a~~~~~~r~~~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~~-----~~~~~~~~~~k~ 277 (337)
++..++.++.++..+..+++.. .+.++|+||++|+||...+|+++++++.++...... .|....++++|+
T Consensus 294 ~~~~~~~~~~~~g~a~~~ae~~-----Gi~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~aK~ 368 (517)
T 4g5e_A 294 LIRQSVRAELMAGLAILITEHI-----GTNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDFGRA 368 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH-----TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHh-----CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHHHHH
Confidence 8899999999999888887642 378999999999999999999999999988755432 266788999999
Q ss_pred HHHHHHHHHHHHHHHhhCCCcccCcchHHHHHHh
Q 019707 278 CAAERATQVTLQAIQCLGGNGYVNEYATGRLLRD 311 (337)
Q Consensus 278 ~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r~~rd 311 (337)
++++...+++++++|++||.+++- |-++-++|
T Consensus 369 ~a~~~~~rv~~eaiqi~GG~g~~~--Pse~d~~~ 400 (517)
T 4g5e_A 369 LYLENFSQMIYELVDLSGRSALIF--ASEDQWND 400 (517)
T ss_dssp HHHHHHHHHHHHHHHHHGGGTTCC--CCHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhCCccccC--CCHHHhcC
Confidence 999999999999999999999983 44455554
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=95.35 E-value=0.19 Score=48.13 Aligned_cols=108 Identities=16% Similarity=0.133 Sum_probs=88.2
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCC-ChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcch
Q 019707 227 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDN-GKV-DPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYA 304 (337)
Q Consensus 227 ~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~-~~~-~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 304 (337)
+|..+.+.|.+..+|+++.+.++++.+.+.++.+.+.. +.+ ...+..+++.|+.+...++-..+.++. .++.++..
T Consensus 482 ~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 559 (597)
T 3owa_A 482 YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETL--IAVENGDM 559 (597)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccchH
Confidence 45788999999999999999999999999999887764 443 456888999999999999999999988 66777777
Q ss_pred HHHHHHhhccCcccCChH-HHHHHHHHHHHHhc
Q 019707 305 TGRLLRDAKLYEIGAGTS-EIRRMIIGRALLKQ 336 (337)
Q Consensus 305 ~~r~~rd~~~~~~~~g~~-~~~~~~l~~~~~~~ 336 (337)
+..++..++-+..+...+ ...+..|++.++.+
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 592 (597)
T 3owa_A 560 LRMMLSSLRKLTRHTPLNVIPKKREIAAKILED 592 (597)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHc
Confidence 777777777776666644 56677899888754
No 43
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=85.52 E-value=23 Score=33.52 Aligned_cols=101 Identities=18% Similarity=0.129 Sum_probs=72.8
Q ss_pred CCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCChhhhhHHHHHHHHHHHHHHHHHHHhhCCCcccCcchHHH
Q 019707 228 GRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVDPKDCAGVILCAAERATQVTLQAIQCLGGNGYVNEYATGR 307 (337)
Q Consensus 228 g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~G~~~~~~~~~~~r 307 (337)
+..+.+.+.+..+++++.+.+..+++.+.++.+. . +. +..+++.++.+...++...+.+++ .++.++.|...
T Consensus 469 ~~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~-~-~~----~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~ 540 (577)
T 2z1q_A 469 GQGVEEEQEVLGAVADILIDAYAAESALLRARRL-G-GL----APVLARIYLAQALDRAQAGALSVL--PRLVEGDEARV 540 (577)
T ss_dssp GGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH-C-TT----HHHHHHHHHHHHHHHHHHHHHHHG--GGTCCTTTTHH
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-c-Cc----HHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCCchhH
Confidence 4556667899999999999999999999888866 2 21 788899999998889888877766 34445554433
Q ss_pred HHHhhccCc-ccCChHHHHHHHHHHHHHhc
Q 019707 308 LLRDAKLYE-IGAGTSEIRRMIIGRALLKQ 336 (337)
Q Consensus 308 ~~rd~~~~~-~~~g~~~~~~~~l~~~~~~~ 336 (337)
.....+.+. ....+++.+...|++.++..
T Consensus 541 ~~~~~~~~~~~~~~~~~~~~~~ia~~~~~~ 570 (577)
T 2z1q_A 541 VYSAARRLTKREPGDLVALRRQAAEAVLEA 570 (577)
T ss_dssp HHHHHHHHTCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCCCChHHHHHHHHHHHHhc
Confidence 333333333 34456778888999988764
No 44
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=84.07 E-value=15 Score=35.09 Aligned_cols=70 Identities=13% Similarity=0.043 Sum_probs=56.3
Q ss_pred cCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCC-hhhhhHHHHHHHHHHHHHHHHHHHhhCC
Q 019707 227 FGRPLGEFQFIQGKTADMYTALQSSRSYVYSVARDCDNGKVD-PKDCAGVILCAAERATQVTLQAIQCLGG 296 (337)
Q Consensus 227 ~g~~~~~~~~vq~~la~~~~~~~~~~a~~~~a~~~~~~~~~~-~~~~~~~k~~~~~~~~~~~~~~~~~~G~ 296 (337)
.+..+.+.+.+..+|+++...++.+.+.+.++.+..+.+.+. ..+..+++.++.+...++...+.++..+
T Consensus 506 ~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~ 576 (607)
T 2uxw_A 506 HKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQSD 576 (607)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 456788899999999999999999999999988776655543 3457889999988888888888775443
Done!