Query 019709
Match_columns 337
No_of_seqs 142 out of 206
Neff 5.1
Searched_HMMs 46136
Date Fri Mar 29 03:55:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019709.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019709hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF06027 DUF914: Eukaryotic pr 100.0 4.3E-30 9.3E-35 251.0 11.3 190 128-327 26-217 (334)
2 KOG2766 Predicted membrane pro 99.9 2.5E-27 5.3E-32 223.0 -1.8 185 125-324 27-212 (336)
3 KOG3912 Predicted integral mem 99.9 3E-23 6.6E-28 197.5 13.0 209 119-333 6-234 (372)
4 PF08627 CRT-like: CRT-like; 99.8 2.1E-19 4.5E-24 152.9 5.8 82 107-188 48-130 (130)
5 PF08449 UAA: UAA transporter 99.7 1.9E-16 4.1E-21 151.3 11.6 193 122-325 6-203 (303)
6 PF04142 Nuc_sug_transp: Nucle 99.6 3.1E-16 6.7E-21 147.4 4.9 138 184-327 18-165 (244)
7 TIGR00817 tpt Tpt phosphate/ph 99.2 2.7E-10 5.8E-15 108.3 12.4 187 116-319 2-188 (302)
8 PTZ00343 triose or hexose phos 99.2 2.8E-10 6.1E-15 111.6 12.8 175 111-295 44-219 (350)
9 KOG2234 Predicted UDP-galactos 99.0 2.1E-09 4.6E-14 105.7 10.4 137 184-326 93-233 (345)
10 KOG1581 UDP-galactose transpor 98.8 1E-07 2.3E-12 92.5 12.7 200 111-319 9-219 (327)
11 PLN00411 nodulin MtN21 family 98.7 9.2E-08 2E-12 94.8 11.0 181 112-295 9-214 (358)
12 PF13536 EmrE: Multidrug resis 98.5 8.2E-08 1.8E-12 79.4 2.7 100 159-259 10-110 (113)
13 KOG1441 Glucose-6-phosphate/ph 98.4 3.2E-06 6.8E-11 83.0 12.8 194 111-319 12-208 (316)
14 TIGR00950 2A78 Carboxylate/Ami 98.4 1.6E-06 3.4E-11 79.7 8.6 104 184-293 47-151 (260)
15 COG0697 RhaT Permeases of the 98.3 8E-06 1.7E-10 74.7 12.0 166 119-293 10-177 (292)
16 KOG1583 UDP-N-acetylglucosamin 98.2 1E-06 2.2E-11 85.0 4.3 172 119-296 5-190 (330)
17 PRK11453 O-acetylserine/cystei 98.2 1.7E-05 3.7E-10 75.7 11.6 103 186-292 61-165 (299)
18 KOG2765 Predicted membrane pro 98.2 3E-06 6.5E-11 84.5 6.4 130 189-322 165-295 (416)
19 PRK11689 aromatic amino acid e 98.1 7.4E-05 1.6E-09 71.3 14.0 161 121-292 9-178 (295)
20 TIGR03340 phn_DUF6 phosphonate 98.1 2.9E-05 6.3E-10 73.4 10.4 102 184-291 63-165 (281)
21 PRK11272 putative DMT superfam 98.0 5E-05 1.1E-09 72.3 11.8 163 115-291 7-171 (292)
22 PRK15430 putative chlorampheni 98.0 3.1E-05 6.8E-10 73.9 10.1 91 190-291 80-170 (296)
23 PF00892 EamA: EamA-like trans 98.0 7.7E-06 1.7E-10 65.8 4.4 70 184-253 54-124 (126)
24 TIGR00688 rarD rarD protein. T 97.9 5.6E-05 1.2E-09 70.2 9.5 95 186-291 73-167 (256)
25 KOG4510 Permease of the drug/m 97.9 3.6E-05 7.7E-10 74.4 7.8 145 183-336 96-252 (346)
26 KOG1582 UDP-galactose transpor 97.7 0.00013 2.7E-09 70.8 7.3 176 112-296 39-216 (367)
27 KOG1580 UDP-galactose transpor 97.4 9.2E-05 2E-09 70.6 2.9 172 110-316 45-216 (337)
28 TIGR00776 RhaT RhaT L-rhamnose 97.4 0.0037 8E-08 60.0 13.6 103 189-291 65-173 (290)
29 PF05653 Mg_trans_NIPA: Magnes 97.3 0.00029 6.4E-09 68.5 5.5 75 185-259 51-126 (300)
30 COG2510 Predicted membrane pro 97.2 0.0018 4E-08 56.5 8.6 132 119-254 6-138 (140)
31 PRK10532 threonine and homoser 97.1 0.018 3.9E-07 54.9 15.0 157 117-292 14-170 (293)
32 TIGR00950 2A78 Carboxylate/Ami 97.0 0.0033 7.1E-08 57.8 8.9 65 186-250 194-259 (260)
33 PF03151 TPT: Triose-phosphate 96.9 0.0048 1E-07 52.3 7.8 69 184-252 82-150 (153)
34 KOG1443 Predicted integral mem 96.7 0.009 2E-07 58.9 9.0 169 118-296 18-190 (349)
35 KOG1442 GDP-fucose transporter 96.6 0.01 2.2E-07 57.9 9.1 110 204-328 123-234 (347)
36 KOG1444 Nucleotide-sugar trans 96.6 0.034 7.4E-07 54.8 12.8 187 113-317 9-198 (314)
37 PF08449 UAA: UAA transporter 96.4 0.009 2E-07 57.3 7.0 136 116-253 155-295 (303)
38 TIGR00803 nst UDP-galactose tr 96.1 0.013 2.8E-07 53.5 6.1 107 188-295 4-110 (222)
39 TIGR03340 phn_DUF6 phosphonate 95.9 0.0094 2E-07 56.4 4.6 64 189-252 217-280 (281)
40 KOG2922 Uncharacterized conser 95.4 0.02 4.4E-07 56.6 4.7 70 187-256 67-137 (335)
41 PRK15051 4-amino-4-deoxy-L-ara 95.3 0.0092 2E-07 50.0 1.9 64 191-254 45-108 (111)
42 PRK10532 threonine and homoser 95.0 0.11 2.4E-06 49.6 8.3 70 187-256 212-282 (293)
43 PLN00411 nodulin MtN21 family 94.9 0.068 1.5E-06 53.3 6.9 68 189-256 262-329 (358)
44 PRK11689 aromatic amino acid e 94.9 0.053 1.1E-06 51.8 5.8 71 186-256 218-288 (295)
45 COG0697 RhaT Permeases of the 94.2 0.14 3E-06 46.8 6.8 70 185-254 216-286 (292)
46 TIGR00803 nst UDP-galactose tr 94.1 0.22 4.7E-06 45.5 7.8 67 186-252 155-221 (222)
47 PTZ00343 triose or hexose phos 93.7 0.19 4.2E-06 49.6 7.2 63 190-252 279-345 (350)
48 PRK11272 putative DMT superfam 93.3 0.3 6.6E-06 46.4 7.6 68 186-253 215-283 (292)
49 KOG4314 Predicted carbohydrate 93.3 0.11 2.4E-06 49.0 4.4 116 194-321 64-181 (290)
50 PRK15430 putative chlorampheni 93.1 0.033 7.1E-07 53.3 0.6 72 186-257 216-287 (296)
51 PF10639 UPF0546: Uncharacteri 92.7 0.1 2.2E-06 44.4 3.0 71 184-254 42-113 (113)
52 TIGR00776 RhaT RhaT L-rhamnose 92.7 0.084 1.8E-06 50.7 2.8 72 184-255 212-288 (290)
53 PRK02971 4-amino-4-deoxy-L-ara 92.6 0.36 7.8E-06 41.6 6.4 116 119-256 5-123 (129)
54 TIGR00817 tpt Tpt phosphate/ph 90.9 0.51 1.1E-05 44.9 6.0 57 198-254 236-292 (302)
55 PRK10452 multidrug efflux syst 89.9 0.19 4.2E-06 43.1 1.9 73 184-256 31-104 (120)
56 PRK11453 O-acetylserine/cystei 89.2 1.5 3.3E-05 41.8 7.7 71 186-256 217-288 (299)
57 PF04142 Nuc_sug_transp: Nucle 88.0 4.5 9.8E-05 38.3 9.9 129 114-246 113-244 (244)
58 PF06800 Sugar_transport: Suga 87.2 1.4 3.1E-05 42.7 6.1 71 182-252 194-268 (269)
59 PRK10650 multidrug efflux syst 84.8 0.87 1.9E-05 38.4 2.9 69 185-253 37-106 (109)
60 PF12398 DUF3660: Receptor ser 84.2 0.69 1.5E-05 33.0 1.7 30 33-62 3-32 (42)
61 PF06027 DUF914: Eukaryotic pr 82.9 5.8 0.00013 39.6 8.3 58 199-256 249-306 (334)
62 PRK09541 emrE multidrug efflux 81.8 0.91 2E-05 38.2 1.9 64 193-256 40-104 (110)
63 PF15169 DUF4564: Domain of un 81.8 1.2 2.7E-05 41.0 2.9 56 231-295 15-73 (187)
64 KOG4314 Predicted carbohydrate 80.7 4.6 9.9E-05 38.3 6.2 149 108-257 127-278 (290)
65 PRK11431 multidrug efflux syst 73.1 2.2 4.8E-05 35.7 1.8 66 188-253 34-100 (105)
66 KOG2765 Predicted membrane pro 72.7 16 0.00034 37.5 7.9 110 144-257 278-392 (416)
67 PF00893 Multi_Drug_Res: Small 71.5 6.1 0.00013 31.8 4.0 56 191-246 37-93 (93)
68 PF02694 UPF0060: Uncharacteri 70.5 7.8 0.00017 32.9 4.5 49 208-256 56-104 (107)
69 COG2076 EmrE Membrane transpor 69.2 4 8.6E-05 34.5 2.4 70 184-253 31-101 (106)
70 PF06570 DUF1129: Protein of u 67.7 25 0.00054 32.2 7.7 57 181-237 144-203 (206)
71 PF04657 DUF606: Protein of un 67.4 26 0.00057 30.4 7.3 72 177-252 59-138 (138)
72 COG1742 Uncharacterized conser 66.6 28 0.0006 29.7 6.9 48 209-256 58-105 (109)
73 KOG1581 UDP-galactose transpor 65.9 30 0.00064 34.6 8.1 69 184-252 242-310 (327)
74 PF03151 TPT: Triose-phosphate 65.7 4.4 9.6E-05 34.1 2.1 53 272-325 2-54 (153)
75 KOG1580 UDP-galactose transpor 62.4 2.7 5.8E-05 40.8 0.2 74 184-257 242-315 (337)
76 KOG1441 Glucose-6-phosphate/ph 55.6 7.5 0.00016 38.6 2.0 69 184-252 233-304 (316)
77 PF04973 NMN_transporter: Nico 55.2 63 0.0014 28.9 7.8 106 127-233 28-133 (181)
78 COG5070 VRG4 Nucleotide-sugar 55.0 25 0.00053 34.1 5.2 156 121-282 11-170 (309)
79 PRK13499 rhamnose-proton sympo 54.5 17 0.00037 36.6 4.3 100 187-286 77-190 (345)
80 KOG1442 GDP-fucose transporter 51.2 33 0.00071 34.2 5.5 118 128-249 197-321 (347)
81 KOG4831 Unnamed protein [Funct 49.1 15 0.00032 31.5 2.5 72 183-254 52-124 (125)
82 PRK02237 hypothetical protein; 47.4 6.8 0.00015 33.3 0.2 47 209-255 59-105 (109)
83 PF06800 Sugar_transport: Suga 45.9 33 0.00071 33.5 4.7 107 185-291 47-159 (269)
84 KOG2234 Predicted UDP-galactos 44.4 86 0.0019 31.8 7.4 139 112-254 180-321 (345)
85 KOG4510 Permease of the drug/m 37.4 18 0.00039 35.8 1.5 66 183-248 253-318 (346)
86 COG2962 RarD Predicted permeas 37.1 28 0.00061 34.4 2.7 78 178-255 65-144 (293)
87 PRK13499 rhamnose-proton sympo 32.9 2.1E+02 0.0046 28.9 8.2 66 187-253 264-339 (345)
88 COG4858 Uncharacterized membra 32.2 3.9E+02 0.0084 25.3 9.1 63 177-239 155-220 (226)
89 PF02554 CstA: Carbon starvati 27.6 4E+02 0.0086 27.4 9.1 50 227-276 233-293 (376)
90 TIGR01528 NMN_trans_PnuC nicot 27.4 77 0.0017 28.9 3.7 24 211-234 114-137 (189)
91 COG5006 rhtA Threonine/homoser 24.2 43 0.00092 32.9 1.5 54 198-251 225-278 (292)
92 COG1966 CstA Carbon starvation 20.2 3.8E+02 0.0083 29.0 7.6 39 113-151 126-164 (575)
No 1
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=4.3e-30 Score=251.00 Aligned_cols=190 Identities=23% Similarity=0.203 Sum_probs=162.6
Q ss_pred hhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHHHHhhhccc
Q 019709 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAIL 207 (337)
Q Consensus 128 G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal~~~L~viA~~yt 207 (337)
..+|.....+..+ -.|.|.|++.+..+...++|.+++.+|+..++.. ++.+.|+|+|+++|++|+++|++.++|++||
T Consensus 26 ~~t~~~s~~l~~~-~~~~P~~Qs~~~Y~~l~~vy~~~~~~r~~~~~~~-~~~~~~~w~y~lla~~Dv~aN~~~v~a~~yT 103 (334)
T PF06027_consen 26 TGTGTFSSLLANK-GVNIPTFQSFFNYVLLALVYTPILLYRRGFKKWL-KVLKRPWWKYFLLALLDVEANYLVVLAYQYT 103 (334)
T ss_pred HhHHHHHHHHHhc-CccCcHHHHHHHHHHHHHHHhhhhhhccccccch-hhcchhHHHHHHHHHHHHHHHHHHHHHhhcc
Confidence 3445555555555 7799999998888888889999888887554433 4677899999999999999999999999999
Q ss_pred cccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCC--CCCCcchHHHHHHHHHhHHHHHH
Q 019709 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH--SLKGAGIFWSLLMIVSFLLQAAD 285 (337)
Q Consensus 208 sgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~--s~~~~~vlw~lL~llS~ip~AlS 285 (337)
+.++.|+|+|++|||++++|++|||+||++.|++|+++|++|+++++.+|..+++ ..++++++||+++++|+++||++
T Consensus 104 svtS~~lL~~~~i~~~~~LS~~fL~~ry~~~~~~gv~i~i~Gv~lv~~sD~~~~~~~~~~~~~i~GDll~l~~a~lya~~ 183 (334)
T PF06027_consen 104 SVTSVQLLDCTSIPFVMILSFIFLKRRYSWFHILGVLICIAGVVLVVVSDVLSGSDSSSGSNPILGDLLALLGAILYAVS 183 (334)
T ss_pred cHhHHHhhhhhhhHHHHHHHHHHHHhhhhHHHHHHHHHHHhhhhheeeecccccccCCCCCccchhHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999754432 34688999999999999999999
Q ss_pred HHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHHHHHhhhcc
Q 019709 286 TVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVSFVYMPSST 327 (337)
Q Consensus 286 nV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l~~~lllPi 327 (337)
||+||+.++| .|...+.|+.++|++++....+.+
T Consensus 184 nV~~E~~v~~--------~~~~~~lg~~Glfg~ii~~iq~~i 217 (334)
T PF06027_consen 184 NVLEEKLVKK--------APRVEFLGMLGLFGFIISGIQLAI 217 (334)
T ss_pred HHHHHHhccc--------CCHHHHHHHHHHHHHHHHHHHHHh
Confidence 9999998765 456678899999999877655543
No 2
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.92 E-value=2.5e-27 Score=223.02 Aligned_cols=185 Identities=19% Similarity=0.169 Sum_probs=160.4
Q ss_pred HHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHHHHhhh
Q 019709 125 VLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAG 204 (337)
Q Consensus 125 Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal~~~L~viA~ 204 (337)
=++.++|....-.+..+--|-|-+++.+......++|.+++.+|. ...+..|++|+++|+.|+++|++++.|+
T Consensus 27 SL~~t~~a~tss~la~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR~-------~~~~~~~~hYilla~~DVEaNy~vV~Ay 99 (336)
T KOG2766|consen 27 SLLITSTAFTSSELARKGINAPTSQTFLNYVLLALVYGPIMLFRR-------KYIKAKWRHYILLAFVDVEANYFVVKAY 99 (336)
T ss_pred HHHHHcchhhhHHHHhccCCCccHHHHHHHHHHHHHHhhHHHhhh-------HHHHHHHHHhhheeEEeecccEEEeeeh
Confidence 344556666666666777899999988888888899999998875 1244567789999999999999999999
Q ss_pred ccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCC-CCCCcchHHHHHHHHHhHHHH
Q 019709 205 AILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH-SLKGAGIFWSLLMIVSFLLQA 283 (337)
Q Consensus 205 ~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~-s~~~~~vlw~lL~llS~ip~A 283 (337)
+||+.++.++|+||.||+.+++||+|||.||++.|+.|+++|++|+++++.||-.+|+ +.++|++.||.++++|+.+||
T Consensus 100 QyTsmtSi~lLDcwaip~v~~lsw~fLktrYrlmki~gV~iCi~GvvmvV~sDV~agd~aggsnp~~GD~lvi~GATlYa 179 (336)
T KOG2766|consen 100 QYTSMTSIMLLDCWAIPCVLVLSWFFLKTRYRLMKISGVVICIVGVVMVVFSDVHAGDRAGGSNPVKGDFLVIAGATLYA 179 (336)
T ss_pred hhcchHHHHHHHHhhhHHHHHHHHHHHHHHHhhheeeeEEeEecceEEEEEeeeccccccCCCCCccCcEEEEecceeee
Confidence 9999999999999999999999999999999999999999999999999999765543 357999999999999999999
Q ss_pred HHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHHHHHhh
Q 019709 284 ADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVSFVYMP 324 (337)
Q Consensus 284 lSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l~~~ll 324 (337)
+|||.||++.|+ .|..++.++.++|+.++..+=
T Consensus 180 VSNv~EEflvkn--------~d~~elm~~lgLfGaIIsaIQ 212 (336)
T KOG2766|consen 180 VSNVSEEFLVKN--------ADRVELMGFLGLFGAIISAIQ 212 (336)
T ss_pred eccccHHHHHhc--------CcHHHHHHHHHHHHHHHHHHH
Confidence 999999998754 787888888888888877654
No 3
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.90 E-value=3e-23 Score=197.55 Aligned_cols=209 Identities=18% Similarity=0.218 Sum_probs=174.4
Q ss_pred HHHHHHHHhhhhhHHHHHHHhC------CCCChhHHHHHHhhhhHHHHHHHHHHHHHh---cCccc-------hhhhcCC
Q 019709 119 IAAAVTVLLGVGNRVLYKLALV------PLKHYPFFLAQLATFGYVAVYFSILYLRYH---AGIVT-------DEMLSMP 182 (337)
Q Consensus 119 i~~i~~Vi~G~~N~Vl~Kl~~~------~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~---~~~it-------~em~~~p 182 (337)
++.+.||+.|+.|+++.|-+.+ |.+++|+.++..+.++...+++...++|.+ .|... ++.-.+.
T Consensus 6 ~ls~imvvsGs~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir~~sn~~g~~s~~~~ilsq~~~pf~ 85 (372)
T KOG3912|consen 6 FLSLIMVVSGSFNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIRLRSNGQGVSSDLDSILSQDSSPFN 85 (372)
T ss_pred hhhhhhhhhccHHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHHHhhcCCCcccccccccccccCCCC
Confidence 4678899999999999999876 567999999999998887766555544432 22222 1112344
Q ss_pred CccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCC--
Q 019709 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP-- 260 (337)
Q Consensus 183 k~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~-- 260 (337)
+.-|+.+++||++|+.+++.|+.+|+.+++||++++.|.|+-++|.-||+++.+..||+|.+.+..|+++++.++-..
T Consensus 86 p~lfl~Pal~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d~~~~~ 165 (372)
T KOG3912|consen 86 PVLFLPPALCDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLDVHLVT 165 (372)
T ss_pred cceecChHHHHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeeeccccc
Confidence 456788999999999999999999999999999999999999999999999999999999999999999999885322
Q ss_pred -CCCCCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHH-HHHHHhhhcccccccc
Q 019709 261 -GHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQ-VSFVYMPSSTFSVKIM 333 (337)
Q Consensus 261 -g~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ-~l~~~lllPi~slp~~ 333 (337)
.-.+.++.+.|++++++++++-|+|.|+|||.+++ ..+|+....||++.|+ .+++.|+.|+.++|.=
T Consensus 166 ~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~------~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~~ 234 (372)
T KOG3912|consen 166 DPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKK------SNVAPLQAVGWEGLFGLVILSLLAIPMYYIPSG 234 (372)
T ss_pred CCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhh------ccCCHHHHhhhhhhHHHHHHHHHHHHHhheecC
Confidence 11244788999999999999999999999997654 3699999999999999 7778899999999863
No 4
>PF08627 CRT-like: CRT-like; InterPro: IPR013936 This region is found in proteins related to Plasmodium falciparum chloroquine resistance transporter (CRT).
Probab=99.78 E-value=2.1e-19 Score=152.86 Aligned_cols=82 Identities=40% Similarity=0.725 Sum_probs=77.1
Q ss_pred cccccccchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHH-HHhcCccchhhhcCCCcc
Q 019709 107 ISKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYL-RYHAGIVTDEMLSMPKAP 185 (337)
Q Consensus 107 ~~~~~~~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~-r~~~~~it~em~~~pk~k 185 (337)
..+-.+++++++++++++|+.|++|+|++|+++++|.||+||++|+++++|+++||+++++ +|+.+.||+||+++|+||
T Consensus 48 k~s~~ke~~~L~v~~vv~V~s~v~N~VL~K~~~~~m~NY~fFL~QlTt~gyvpIffaV~lyk~y~t~~It~Emr~FPkyK 127 (130)
T PF08627_consen 48 KQSYSKENFKLLVYVVVYVVSGVINRVLYKKMTNPMKNYPFFLNQLTTFGYVPIFFAVVLYKMYFTGDITKEMRAFPKYK 127 (130)
T ss_pred HHhhhhcchHHHHHHHHHHHHHHHHHHHHHHHHhhcccchHHHHHhcccceehHHHHHHHHHHHHcCCCCHHHHhCcccc
Confidence 4556799999999999999999999999999999999999999999999999999998865 689999999999999999
Q ss_pred chH
Q 019709 186 FVA 188 (337)
Q Consensus 186 f~i 188 (337)
|++
T Consensus 128 FaI 130 (130)
T PF08627_consen 128 FAI 130 (130)
T ss_pred ccC
Confidence 985
No 5
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.68 E-value=1.9e-16 Score=151.32 Aligned_cols=193 Identities=22% Similarity=0.270 Sum_probs=145.8
Q ss_pred HHHHHhhhhhHHHHHHHhC-CCCC-hhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHH
Q 019709 122 AVTVLLGVGNRVLYKLALV-PLKH-YPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAAT 199 (337)
Q Consensus 122 i~~Vi~G~~N~Vl~Kl~~~-~~~n-Yp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal~~~L 199 (337)
.+.......|-++.+.... +.++ ||.|++.++...+.++-+....... .++..+.|.++|++++++|..+..+
T Consensus 6 ~~i~~~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (303)
T PF08449_consen 6 AGIFGGCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFK-----FPKSRKIPLKKYAILSFLFFLASVL 80 (303)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcc-----ccCCCcChHHHHHHHHHHHHHHHHH
Confidence 3334444455555555444 4445 8999999888777765443332221 2344667888999999999999999
Q ss_pred HHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCC---CCCcchHHHHHHH
Q 019709 200 GMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS---LKGAGIFWSLLMI 276 (337)
Q Consensus 200 ~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s---~~~~~vlw~lL~l 276 (337)
...|..|+|.+.+++++.+.++++|+++++++||||+..||++++++++|+++...++....+. ...+...|.++++
T Consensus 81 ~~~al~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~~~~~~~~~~G~~ll~ 160 (303)
T PF08449_consen 81 SNAALKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSSNSSSFSSALGIILLL 160 (303)
T ss_pred HHHHHHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeecccccccccccccccchhHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999876433221 2233445999999
Q ss_pred HHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHHHHHhhh
Q 019709 277 VSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVSFVYMPS 325 (337)
Q Consensus 277 lS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l~~~lll 325 (337)
+|.+++|+.+++||+++++| +.+.+....+.++|..++..+..
T Consensus 161 ~sl~~~a~~~~~qe~~~~~~------~~~~~~~mfy~n~~~~~~~~~~~ 203 (303)
T PF08449_consen 161 LSLLLDAFTGVYQEKLFKKY------GKSPWELMFYTNLFSLPFLLILL 203 (303)
T ss_pred HHHHHHHHHHHHHHHHHHHh------CCcHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999875 34445555555666554444333
No 6
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.61 E-value=3.1e-16 Score=147.38 Aligned_cols=138 Identities=22% Similarity=0.280 Sum_probs=120.4
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCC---
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP--- 260 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~--- 260 (337)
+++++|+++|++.|.+.+.|+.+++++.+|+++|+-|++|+++|+++||||.+..||++.++.++|++++..++...
T Consensus 18 ~~~~vPA~lY~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~~~~ 97 (244)
T PF04142_consen 18 LKLAVPALLYAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQSSDN 97 (244)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCcccccc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999988864322
Q ss_pred -CCC------CCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHHHHHhhhcc
Q 019709 261 -GHS------LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVSFVYMPSST 327 (337)
Q Consensus 261 -g~s------~~~~~vlw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l~~~lllPi 327 (337)
++. ...+.+.|.+++++++++.|++.||+|+++|+. +.+++.-|.+-++|..++.++..++
T Consensus 98 ~~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~------~~s~~~~N~qL~~~gi~~~~~~~~~ 165 (244)
T PF04142_consen 98 SSSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRS------NVSLWIQNMQLYLFGILFNLLALLL 165 (244)
T ss_pred ccccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhccc------chhHHHHHHHHHHHHHHHHHHHHhc
Confidence 111 134568889999999999999999999987652 3888888999999998888777544
No 7
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.17 E-value=2.7e-10 Score=108.29 Aligned_cols=187 Identities=12% Similarity=0.066 Sum_probs=137.2
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHH
Q 019709 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEAL 195 (337)
Q Consensus 116 ~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal 195 (337)
+...+++..-.+....+++.|...+. .++|.+++.++...-.++... .++....+ .++.....+++.+.+|++-+.
T Consensus 2 ~~~~~~~~w~~~~~~~~~~NK~~l~~-~~~P~~~~~~~~~~~~~~~~~--~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~ 77 (302)
T TIGR00817 2 QTGLLFGLWYFLNVYFNIYNKKLLNV-FPYPYFKTLISLAVGSLYCLL--SWSSGLPK-RLKISSALLKLLLPVAIVHTI 77 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhh-CChhHHHHHHHHHHHHHHHHH--HHHhCCCC-CCCCCHHHHHHHHHHHHHHHH
Confidence 45566777777888888999998874 699999988765332222111 12111100 001111123467889999999
Q ss_pred HHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcchHHHHHH
Q 019709 196 AAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLM 275 (337)
Q Consensus 196 ~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~vlw~lL~ 275 (337)
...+.+.|..|++.+..+++.....+++++++++++|+|++..++.|++++++|+.+.... + .+....|+++.
T Consensus 78 ~~~~~~~~l~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~~~----~---~~~~~~G~~~~ 150 (302)
T TIGR00817 78 GHVTSNVSLSKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALASDT----E---LSFNWAGFLSA 150 (302)
T ss_pred HHHHHHHHHHhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhcCC----c---ccccHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999764311 1 13346799999
Q ss_pred HHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHH
Q 019709 276 IVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVS 319 (337)
Q Consensus 276 llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l 319 (337)
++|.+..|+.+++.++..++ ++.|...+..|...+.++
T Consensus 151 l~a~~~~a~~~v~~k~~~~~------~~~~~~~~~~~~~~~~~~ 188 (302)
T TIGR00817 151 MISNITFVSRNIFSKKAMTI------KSLDKTNLYAYISIMSLF 188 (302)
T ss_pred HHHHHHHHHHHHHHHHhhcc------CCCCcccHHHHHHHHHHH
Confidence 99999999999988875321 248888887777655543
No 8
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.16 E-value=2.8e-10 Score=111.64 Aligned_cols=175 Identities=14% Similarity=0.081 Sum_probs=134.3
Q ss_pred cccchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhc-CccchhhhcCCCccchHh
Q 019709 111 NDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHA-GIVTDEMLSMPKAPFVAV 189 (337)
Q Consensus 111 ~~~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~-~~it~em~~~pk~kf~i~ 189 (337)
...++++.+++++--.+...-.+..|..++. .+||++++.++...-.++.......+++. .++. ..+..+++.+.+
T Consensus 44 ~~~~~~~~~~~~~wy~~s~~~~~~nK~vl~~-~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~--~~~~~~~~llp~ 120 (350)
T PTZ00343 44 PNFKWKLALLFLTWYALNVLYVVDNKLALNM-LPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK--SLKLFLKNFLPQ 120 (350)
T ss_pred CcccHHHHHHHHHHHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC--CHHHHHHHHHHH
Confidence 3568999999988888888889999999887 47999999976643322211111111111 0111 011133568889
Q ss_pred hHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcch
Q 019709 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (337)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~v 269 (337)
|++-.......++|..+++.+..+++.....+++++++++++|+|+++.+++|++++++|+++....+ .+...
T Consensus 121 gl~~~~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~~~~-------~~~~~ 193 (350)
T PTZ00343 121 GLCHLFVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALASVKE-------LHFTW 193 (350)
T ss_pred HHHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHheeccc-------chhHH
Confidence 99998888888899999999999999999999999999999999999999999999999999976421 12247
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHH
Q 019709 270 FWSLLMIVSFLLQAADTVLKEVIFLD 295 (337)
Q Consensus 270 lw~lL~llS~ip~AlSnV~kE~~F~~ 295 (337)
.|.++.++|.+..|+.+++-++..++
T Consensus 194 ~G~~~~l~s~~~~a~~~i~~k~~~~~ 219 (350)
T PTZ00343 194 LAFWCAMLSNLGSSLRSIFAKKTMKN 219 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 79999999999999999999987654
No 9
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=98.99 E-value=2.1e-09 Score=105.71 Aligned_cols=137 Identities=18% Similarity=0.159 Sum_probs=117.2
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec---CCCC
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS---GSNP 260 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s---gs~~ 260 (337)
.|..+|+++-++.|.+.++++.|.++..+|+..|.-|..|.+++.++|+||.+..||...++-++|+.++-.+ +.++
T Consensus 93 lk~~vPa~iYalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~~~a 172 (345)
T KOG2234|consen 93 LKVSVPALIYALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSPTGA 172 (345)
T ss_pred HHHHHHHHHHHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCCCCc
Confidence 6899999999999999999999999999999999999999999999999999999999999999999988743 2222
Q ss_pred C-CCCCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHHHHHhhhc
Q 019709 261 G-HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVSFVYMPSS 326 (337)
Q Consensus 261 g-~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l~~~lllP 326 (337)
. .....|.+.|-...+.+|...+++.||=|++.|+ ++.++|.-|-.-++|+.++.++...
T Consensus 173 ~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~------s~~s~wi~NiqL~~~g~~f~~l~~~ 233 (345)
T KOG2234|consen 173 KSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKG------SNVSLWIRNIQLYFFGILFNLLTIL 233 (345)
T ss_pred cCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhc------CCchHHHHHHHHHHHHHHHHHHHHh
Confidence 1 2346889999999999999999999999998654 2477777777777777776665543
No 10
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=98.75 E-value=1e-07 Score=92.50 Aligned_cols=200 Identities=16% Similarity=0.212 Sum_probs=146.3
Q ss_pred cccchHHHHHHHHHHHhhhhhHHHH-HHHhCCC------CChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCC
Q 019709 111 NDRRVEIVIAAAVTVLLGVGNRVLY-KLALVPL------KHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK 183 (337)
Q Consensus 111 ~~~~~~v~i~~i~~Vi~G~~N~Vl~-Kl~~~~~------~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk 183 (337)
.++-+.+.+++.+.-.+=+.=-|++ |++..+. ++.|-|+...+.++.+++-...+ +.+.. +-+..-|+
T Consensus 9 ~~~~~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l--~~~k~---~~~~~apl 83 (327)
T KOG1581|consen 9 ANKIILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAML--KWWKK---ELSGVAPL 83 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHH--hcccc---cCCCCCch
Confidence 3455555555544333322222332 5555544 26788888888887777653332 22221 12345688
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCC--C
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP--G 261 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~--g 261 (337)
|+|...++...++..++.-|+.|++=+.|.+--..-+.-+|++=.++-|+||+..+|+.+++|.+|+.+-...+.++ +
T Consensus 84 ~~y~~is~tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~s~~ 163 (327)
T KOG1581|consen 84 YKYSLISFTNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSDSSS 163 (327)
T ss_pred hHHhHHHHHhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCCCcc
Confidence 99999999999999999999999999999999999888899999999999999999999999999988876643222 2
Q ss_pred CCCCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhc-CCCC-eEEEeehhhHHHHH
Q 019709 262 HSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLK-GGVD-LFVVNSYGSAFQVS 319 (337)
Q Consensus 262 ~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk-~~ld-if~vn~w~s~fQ~l 319 (337)
++..+|.+.|.+|+...-.+.++-|..|+++|+++ | ++.| ++.+|-|+..+...
T Consensus 164 ~~g~~ns~~G~~Ll~~~L~fDgfTn~tQd~lf~~~----k~s~~~mM~~vNLf~~i~~~~ 219 (327)
T KOG1581|consen 164 KSGRENSPIGILLLFGYLLFDGFTNATQDSLFKKY----KVSSLHMMFGVNLFSAILNGT 219 (327)
T ss_pred ccCCCCchHhHHHHHHHHHHHhhHHhHHHHHhccC----CccHhHHHHHHHHHHHHHHHH
Confidence 33347999999999999999999999999999864 2 1233 45566666666543
No 11
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.70 E-value=9.2e-08 Score=94.82 Aligned_cols=181 Identities=17% Similarity=0.197 Sum_probs=120.1
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHhCC-CCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhh
Q 019709 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVG 190 (337)
Q Consensus 112 ~~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~-~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~G 190 (337)
+|..+..+.++++=+.-.+..++.|...+. +..++ +.-+-...=.++.+++.+.+.+....++.. .-.+.+++++|
T Consensus 9 ~~~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~--~~~~R~~iA~l~Ll~~~~~~~~~~~~~~~~-~~~~~~l~l~g 85 (358)
T PLN00411 9 RREAVFLTAMLATETSVVGISTLFKVATSKGLNIYP--FLGYSYLLASLLLLPSLFFTNRSRSLPPLS-VSILSKIGLLG 85 (358)
T ss_pred hhccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccH--HHHHHHHHHHHHHHHHHHHHHHhcccCcch-HHHHHHHHHHH
Confidence 345666666777767777788888888864 23333 222211111112223333332211111100 00113577788
Q ss_pred HHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHH------hccccceeeeehhhheeeceeeEeecCCCC----
Q 019709 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF------LGRRYRVNQLFGCFLVGIGVIITVASGSNP---- 260 (337)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~if------Lk~RY~~~qi~G~~IVl~Gviv~v~sgs~~---- 260 (337)
++-...+.+.+.|.+||+.....++......|+++++.+| +|+|.+..|++|.+++++|+.++...+...
T Consensus 86 ~~g~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~g~~~~~~ 165 (358)
T PLN00411 86 FLGSMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYHGPRVFVA 165 (358)
T ss_pred HHHHHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHccCcccccc
Confidence 8776666688999999999999999999999999999999 699999999999999999998765432100
Q ss_pred --------------CCCCCCcchHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 019709 261 --------------GHSLKGAGIFWSLLMIVSFLLQAADTVLKEVIFLD 295 (337)
Q Consensus 261 --------------g~s~~~~~vlw~lL~llS~ip~AlSnV~kE~~F~~ 295 (337)
.....++.++++++.++|++..|+.+++..+..++
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~ 214 (358)
T PLN00411 166 SSPPYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSE 214 (358)
T ss_pred cccccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00111223668999999999999999999886554
No 12
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.47 E-value=8.2e-08 Score=79.44 Aligned_cols=100 Identities=20% Similarity=0.188 Sum_probs=79.4
Q ss_pred HHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHH-HHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccce
Q 019709 159 AVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRV 237 (337)
Q Consensus 159 ~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDa-l~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~ 237 (337)
++...+...+.+.++..++.++.++++....|++.. .+..+.+.|..|+++ ...++.+....|+++++.+++|+|.+.
T Consensus 10 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~~~er~~~ 88 (113)
T PF13536_consen 10 LFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLFFKERLSP 88 (113)
T ss_pred HHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHHhcCCCCH
Confidence 334444455544444455555555555666788886 899999999999995 777999999999999999999999999
Q ss_pred eeeehhhheeeceeeEeecCCC
Q 019709 238 NQLFGCFLVGIGVIITVASGSN 259 (337)
Q Consensus 238 ~qi~G~~IVl~Gviv~v~sgs~ 259 (337)
.+++|+.++++|++++..++.+
T Consensus 89 ~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 89 RRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred HHHHHHHHHHHHHHHHhhhhcc
Confidence 9999999999999999887543
No 13
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=98.42 E-value=3.2e-06 Score=83.02 Aligned_cols=194 Identities=18% Similarity=0.237 Sum_probs=149.9
Q ss_pred cccchHHHHHHHHHHHhhhhhHHHHHHHhCC-CCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhh--hcCCCccch
Q 019709 111 NDRRVEIVIAAAVTVLLGVGNRVLYKLALVP-LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM--LSMPKAPFV 187 (337)
Q Consensus 111 ~~~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~-~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em--~~~pk~kf~ 187 (337)
.++.....++...-..+.+...+..|..+++ -.+||.+++.++.+.=...+... ...+..+... .+.+.+..+
T Consensus 12 ~~~~~~~~~~~~~w~~~~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~----~~l~~~~~~~~~~~~~~~~ll 87 (316)
T KOG1441|consen 12 LKKILRIGIAFAIWYVLSVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVI----KVLKLVPPSKISSKLPLRTLL 87 (316)
T ss_pred cchhHHHHHHHHHHhhhheeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHH----HHhcCCCCCccccccchHHHH
Confidence 3466777777888888899999999999998 56999999988443222222111 1111111111 345667788
Q ss_pred HhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCc
Q 019709 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGA 267 (337)
Q Consensus 188 i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~ 267 (337)
-+|++-..+..++..++.|+|.+-.|+.--.++|++.++++++.+++|+..-++-.+.++.|+.++-..+ .+-
T Consensus 88 pl~~~~~~~~v~~n~Sl~~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~lsL~piv~GV~ias~~e-------~~f 160 (316)
T KOG1441|consen 88 PLGLVFCISHVLGNVSLSYVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTYLSLLPIVFGVAIASVTE-------LSF 160 (316)
T ss_pred HHHHHHHHHHHhcchhhhccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEEEEEEEeeeeEEEeeecc-------ccc
Confidence 8999999999999999999999999999999999999999999999999999999999999998876631 234
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHH
Q 019709 268 GIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVS 319 (337)
Q Consensus 268 ~vlw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l 319 (337)
.++|-+..++|.+.-|++|++.|+++++. +.++|..-+-.+.+-.+++
T Consensus 161 n~~G~i~a~~s~~~~al~~I~~~~ll~~~----~~~~~~~~ll~y~ap~s~~ 208 (316)
T KOG1441|consen 161 NLFGFISAMISNLAFALRNILSKKLLTSK----GESLNSMNLLYYTAPISLI 208 (316)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhhcc----ccccCchHHHHHhhhHHHH
Confidence 57788888999999999999999987421 1237777777777777654
No 14
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=98.36 E-value=1.6e-06 Score=79.70 Aligned_cols=104 Identities=19% Similarity=0.079 Sum_probs=88.5
Q ss_pred ccchHhhH-HHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCC
Q 019709 184 APFVAVGL-LEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH 262 (337)
Q Consensus 184 ~kf~i~Gl-lDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~ 262 (337)
+++++.|. +-.+...+.+.|..|++.....++.+....++++++.+++|+|.+..|++|+.+.++|+++...++.
T Consensus 47 ~~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~~~~gi~i~~~Gv~li~~~~~---- 122 (260)
T TIGR00950 47 LRLLLLGALQIGVFYVLYFVAVKRLPVGEAALLLYLAPLYVTLLSDLMGKERPRKLVLLAAVLGLAGAVLLLSDGN---- 122 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcChhhhHHHHhhhHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHhhccCCc----
Confidence 34666664 4688889999999999999999999999999999999999999999999999999999988764431
Q ss_pred CCCCcchHHHHHHHHHhHHHHHHHHHHHHHh
Q 019709 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEVIF 293 (337)
Q Consensus 263 s~~~~~vlw~lL~llS~ip~AlSnV~kE~~F 293 (337)
.+....|+++.++|.+..|+.+++.-+..
T Consensus 123 --~~~~~~G~~~~l~a~~~~a~~~~~~k~~~ 151 (260)
T TIGR00950 123 --LSINPAGLLLGLGSGISFALGTVLYKRLV 151 (260)
T ss_pred --ccccHHHHHHHHHHHHHHHHHHHHHhHHh
Confidence 13446799999999999999999977643
No 15
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.31 E-value=8e-06 Score=74.70 Aligned_cols=166 Identities=22% Similarity=0.173 Sum_probs=113.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCcc-chHhhHHHHHHH
Q 019709 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAP-FVAVGLLEALAA 197 (337)
Q Consensus 119 i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~k-f~i~GllDal~~ 197 (337)
.+.+..-+....+....|...+. +.|.+...+......... .+ ....+... .......++++ .+.-++..+...
T Consensus 10 ~~~l~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 84 (292)
T COG0697 10 LALLLWGLLWGLSFIALKLAVES--LDPFLFAAALRFLIAALL-LL-PLLLLEPR-GLRPALRPWLLLLLLALLGLALPF 84 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcc--cCChHHHHHHHHHHHHHH-HH-HHHHhhcc-cccccccchHHHHHHHHHHHHHHH
Confidence 33444445566677777777665 455554443222222222 11 11111110 00111122233 444557788888
Q ss_pred HHHHhhhccccccHHHHhcchhHHHHHHHHH-HHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcchHHHHHHH
Q 019709 198 ATGMAAGAILSGASIPILSQTFLVWQILLSI-IFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276 (337)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~-ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~vlw~lL~l 276 (337)
.+.+.+..|++.....++......++.+++. +++|+|.+..++.|.++..+|++++..++..... . ...++++.+
T Consensus 85 ~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~~~---~-~~~g~~~~l 160 (292)
T COG0697 85 LLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGGGI---L-SLLGLLLAL 160 (292)
T ss_pred HHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcchh---H-HHHHHHHHH
Confidence 9999999999999999999999999999997 7779999999999999999999999887543211 1 578999999
Q ss_pred HHhHHHHHHHHHHHHHh
Q 019709 277 VSFLLQAADTVLKEVIF 293 (337)
Q Consensus 277 lS~ip~AlSnV~kE~~F 293 (337)
++.+..|+.+++.++..
T Consensus 161 ~a~~~~a~~~~~~~~~~ 177 (292)
T COG0697 161 AAALLWALYTALVKRLS 177 (292)
T ss_pred HHHHHHHHHHHHHHHhc
Confidence 99999999999999753
No 16
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=98.22 E-value=1e-06 Score=84.99 Aligned_cols=172 Identities=20% Similarity=0.212 Sum_probs=109.6
Q ss_pred HHHHHHHHhhhh-hHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHH
Q 019709 119 IAAAVTVLLGVG-NRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAA 197 (337)
Q Consensus 119 i~~i~~Vi~G~~-N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal~~ 197 (337)
++.+..+..|++ |.+..-.. .+...-..-+-.+.+|.++.+.+.+..-+.+. -..++|-+.|+++-.+=...|
T Consensus 5 ~~ai~~vf~GCcsnvv~lE~L-~~~~pgsgNLITFaqFlFia~eGlif~skf~~-----~k~kiplk~Y~i~V~mFF~vn 78 (330)
T KOG1583|consen 5 AAAISLVFGGCCSNVVFLELL-VRNEPGSGNLITFAQFLFIATEGLIFTSKFFT-----VKPKIPLKDYAITVAMFFIVN 78 (330)
T ss_pred HHHHHHHHHhhhchHHHHHHH-HHhCCCCeeehHHHHHHHHHHhceeeeccccc-----cCCCCchhhhheehheeeeee
Confidence 344555555555 55544443 33332233344455677777766553322222 114455555655433322233
Q ss_pred HHHHhhhc-cccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEee-cCCCCCC---C-----CCCc
Q 019709 198 ATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA-SGSNPGH---S-----LKGA 267 (337)
Q Consensus 198 ~L~viA~~-ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~-sgs~~g~---s-----~~~~ 267 (337)
..-..|.. ..|.++-.+.++.....+|+++++++||||+..||..++++.+|++++-. +..+... + ..+.
T Consensus 79 v~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~~~~~l~~~~~~~~ 158 (330)
T KOG1583|consen 79 VTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRSKLSGLDSGSAQSD 158 (330)
T ss_pred eeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhhhhcccccCccccc
Confidence 33333444 67888889999999999999999999999999999999999999888755 3211100 0 0111
Q ss_pred c---hHHHHHHHHHhHHHHHHHHHHHHHhHHH
Q 019709 268 G---IFWSLLMIVSFLLQAADTVLKEVIFLDA 296 (337)
Q Consensus 268 ~---vlw~lL~llS~ip~AlSnV~kE~~F~~~ 296 (337)
. .+|..+..++.+..|..-.|+|...++|
T Consensus 159 ~~~w~iGi~lL~~al~~sa~mgiyqE~~Y~ky 190 (330)
T KOG1583|consen 159 FFWWLIGIALLVFALLLSAYMGIYQETTYQKY 190 (330)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 1 4567888899999999999999998877
No 17
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.18 E-value=1.7e-05 Score=75.74 Aligned_cols=103 Identities=18% Similarity=0.265 Sum_probs=78.5
Q ss_pred chHhhHHHHHHH-HHHHhhhcc-ccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCC
Q 019709 186 FVAVGLLEALAA-ATGMAAGAI-LSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHS 263 (337)
Q Consensus 186 f~i~GllDal~~-~L~viA~~y-tsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s 263 (337)
.+..|++-.... .+.+.+..| +|.....++.+...+++++++++++|+|.+..|++|+++.++|+.+...++.++
T Consensus 61 ~~~~g~~~~~~~~~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~~~~~~--- 137 (299)
T PRK11453 61 LLGYGLTISFGQFAFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIEDSLNG--- 137 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhccccCCC---
Confidence 333455433333 344567777 466677888888989999999999999999999999999999988876442211
Q ss_pred CCCcchHHHHHHHHHhHHHHHHHHHHHHH
Q 019709 264 LKGAGIFWSLLMIVSFLLQAADTVLKEVI 292 (337)
Q Consensus 264 ~~~~~vlw~lL~llS~ip~AlSnV~kE~~ 292 (337)
.+....++++.+++.+..|+.+++..+.
T Consensus 138 -~~~~~~G~~l~l~aal~~a~~~v~~~~~ 165 (299)
T PRK11453 138 -QHVAMLGFMLTLAAAFSWACGNIFNKKI 165 (299)
T ss_pred -cchhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1224579999999999999999998874
No 18
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=98.17 E-value=3e-06 Score=84.54 Aligned_cols=130 Identities=29% Similarity=0.288 Sum_probs=107.3
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCC-CCCCc
Q 019709 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH-SLKGA 267 (337)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~-s~~~~ 267 (337)
...+=.++|+....|+.||+.+++.+|+-++=-||+.++.+|...|++..+.++++++++|++++...++.+.. ..+++
T Consensus 165 fc~lWF~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~sKllav~~si~GViiVt~~~s~~~~~~~a~~ 244 (416)
T KOG2765|consen 165 FCPLWFLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLSKLLAVFVSIAGVIIVTMGDSKQNSDLPASR 244 (416)
T ss_pred HHHHHHHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHHHHHHHHHhhccEEEEEeccccccccCCccc
Confidence 44445679999999999999999999999999999999999999999999999999999999999988765432 24577
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHHHHH
Q 019709 268 GIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVSFVY 322 (337)
Q Consensus 268 ~vlw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l~~~ 322 (337)
..+|+++-++|++.||+=.|.=-+-..+ -++++|+=.+-|++++|.++...
T Consensus 245 ~llG~llaL~sA~~YavY~vllk~~~~~----eg~rvdi~lffGfvGLfnllllw 295 (416)
T KOG2765|consen 245 PLLGNLLALLSALLYAVYTVLLKRKIGD----EGERVDIQLFFGFVGLFNLLLLW 295 (416)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhhccc----ccccccHHHHHHHHHHHHHHHHh
Confidence 7999999999999999987754432211 11359988888999999876444
No 19
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.09 E-value=7.4e-05 Score=71.32 Aligned_cols=161 Identities=12% Similarity=0.038 Sum_probs=101.5
Q ss_pred HHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHH-H
Q 019709 121 AAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAA-T 199 (337)
Q Consensus 121 ~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal~~~-L 199 (337)
.++.+++-.+|-+..|...+.+. |+.+..+-...-.++.+++ .+ + ++ .+..+|+..+.|.+-..... +
T Consensus 9 ~l~a~~~Wg~~~~~~k~~~~~~~--P~~~~~~R~~~a~l~l~~~--~~-~----~~--~~~~~~~~~~~~~l~~~~~~~~ 77 (295)
T PRK11689 9 GLIAILLWSTMVGLIRGVSESLG--PVGGAAMIYSVSGLLLLLT--VG-F----PR--LRQFPKRYLLAGGLLFVSYEIC 77 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHccCC--hHHHHHHHHHHHHHHHHHH--cc-c----cc--cccccHHHHHHHhHHHHHHHHH
Confidence 33344445577889998877543 3334433221111111111 11 1 11 11123455666666433333 3
Q ss_pred HHhhhc----cccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCC--CC--CCCCcchHH
Q 019709 200 GMAAGA----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNP--GH--SLKGAGIFW 271 (337)
Q Consensus 200 ~viA~~----ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~--g~--s~~~~~vlw 271 (337)
.+.|.. +++.....++......++++++++++|+|.+..|++|+++.++|+.+...++.+. ++ ...+....|
T Consensus 78 ~~~a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~G 157 (295)
T PRK11689 78 LALSLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWLLIPGLLLALAGVAWVLGGDNGLSLAELINNIASNPLS 157 (295)
T ss_pred HHHHHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHHHHHHHHHHHHhHhheecCCccchhhhhhhccccChHH
Confidence 344544 4566666889999999999999999999999999999999999998877653211 00 011234569
Q ss_pred HHHHHHHhHHHHHHHHHHHHH
Q 019709 272 SLLMIVSFLLQAADTVLKEVI 292 (337)
Q Consensus 272 ~lL~llS~ip~AlSnV~kE~~ 292 (337)
+++.++|.+..|+.+++-++.
T Consensus 158 ~~~~l~aa~~~A~~~v~~k~~ 178 (295)
T PRK11689 158 YGLAFIGAFIWAAYCNVTRKY 178 (295)
T ss_pred HHHHHHHHHHHHHHHHHHhhc
Confidence 999999999999999998874
No 20
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=98.06 E-value=2.9e-05 Score=73.39 Aligned_cols=102 Identities=10% Similarity=-0.005 Sum_probs=82.4
Q ss_pred ccchH-hhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCC
Q 019709 184 APFVA-VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGH 262 (337)
Q Consensus 184 ~kf~i-~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~ 262 (337)
|.+++ -|...+....+...|+++++.+...++.....+++++++++++|+|.+..|++|+.++++|+.+...++..
T Consensus 63 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~~~~~--- 139 (281)
T TIGR03340 63 WLLLAISAVANMVYFLGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGLSRFA--- 139 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhccccc---
Confidence 33444 44568888889999999999999999999999999999999999999999999999999999876654321
Q ss_pred CCCCcchHHHHHHHHHhHHHHHHHHHHHH
Q 019709 263 SLKGAGIFWSLLMIVSFLLQAADTVLKEV 291 (337)
Q Consensus 263 s~~~~~vlw~lL~llS~ip~AlSnV~kE~ 291 (337)
.....+.++.+++.+.+|+.+++..+
T Consensus 140 ---~~~~~g~~~~l~aal~~a~~~i~~k~ 165 (281)
T TIGR03340 140 ---QHRRKAYAWALAAALGTAIYSLSDKA 165 (281)
T ss_pred ---ccchhHHHHHHHHHHHHHHhhhhccc
Confidence 11234556788899999998886554
No 21
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.04 E-value=5e-05 Score=72.26 Aligned_cols=163 Identities=15% Similarity=0.158 Sum_probs=110.3
Q ss_pred hHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHH-
Q 019709 115 VEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLE- 193 (337)
Q Consensus 115 ~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllD- 193 (337)
+.+..+.+.+.+.=..|-+..|...+.+.... ...+-...-.++.+++...+..+ .-++ .++.++++.|.+-
T Consensus 7 ~~~~~~~~~~~~iWg~~~~~~K~~~~~~~p~~--~~~~R~~~a~l~ll~~~~~~~~~-~~~~----~~~~~~~~~g~~~~ 79 (292)
T PRK11272 7 LPLFGALFALYIIWGSTYLVIRIGVESWPPLM--MAGVRFLIAGILLLAFLLLRGHP-LPTL----RQWLNAALIGLLLL 79 (292)
T ss_pred HHHHHHHHHHHHHHhhHHHHHHHHhccCCHHH--HHHHHHHHHHHHHHHHHHHhCCC-CCcH----HHHHHHHHHHHHHH
Confidence 45556666666777779999998887554432 33322222222223332222111 1011 1123456677664
Q ss_pred HHHHHHHHhhh-ccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcchHHH
Q 019709 194 ALAAATGMAAG-AILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWS 272 (337)
Q Consensus 194 al~~~L~viA~-~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~vlw~ 272 (337)
+....+...|. .+++.....++......++++++.+ +|+|.++.|++|+++.++|+++....+. . +....|+
T Consensus 80 ~~~~~~~~~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~~~~~~~la~~Gv~ll~~~~~-----~-~~~~~G~ 152 (292)
T PRK11272 80 AVGNGMVTVAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKLEWLGIAIGLAGIVLLNSGGN-----L-SGNPWGA 152 (292)
T ss_pred HHHHHHHHHHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchhHHHHHHHHHHhHHHHhcCcc-----c-ccchHHH
Confidence 45667778888 8998888899999999999999985 6999999999999999999887643211 1 2235789
Q ss_pred HHHHHHhHHHHHHHHHHHH
Q 019709 273 LLMIVSFLLQAADTVLKEV 291 (337)
Q Consensus 273 lL~llS~ip~AlSnV~kE~ 291 (337)
++.++|.+.+|+.+++.++
T Consensus 153 l~~l~a~~~~a~~~~~~~~ 171 (292)
T PRK11272 153 ILILIASASWAFGSVWSSR 171 (292)
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 9999999999999998776
No 22
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=98.03 E-value=3.1e-05 Score=73.90 Aligned_cols=91 Identities=16% Similarity=0.085 Sum_probs=77.3
Q ss_pred hHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcch
Q 019709 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (337)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~v 269 (337)
+++=+.+..+.+.|..++|.....++..+.-.++++++++|+|+|.++.|++|+++.++|+++...++. +.
T Consensus 80 ~~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~~~~-------~~-- 150 (296)
T PRK15430 80 AVLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLWTFG-------SL-- 150 (296)
T ss_pred HHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHcC-------Cc--
Confidence 345666788899999999999999999999999999999999999999999999999999988764411 11
Q ss_pred HHHHHHHHHhHHHHHHHHHHHH
Q 019709 270 FWSLLMIVSFLLQAADTVLKEV 291 (337)
Q Consensus 270 lw~lL~llS~ip~AlSnV~kE~ 291 (337)
+++.++|++.+|+.+++.++
T Consensus 151 --~~~~l~aa~~~a~~~i~~r~ 170 (296)
T PRK15430 151 --PIIALGLAFSFAFYGLVRKK 170 (296)
T ss_pred --cHHHHHHHHHHHHHHHHHHh
Confidence 24678889999999988776
No 23
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=97.99 E-value=7.7e-06 Score=65.79 Aligned_cols=70 Identities=31% Similarity=0.391 Sum_probs=63.8
Q ss_pred ccchHhhHHH-HHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeE
Q 019709 184 APFVAVGLLE-ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (337)
Q Consensus 184 ~kf~i~GllD-al~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~ 253 (337)
...+++|.+. +.+..+.+.|..+++.+...++.....+++++++++++|+|.+..|++|+.++++|+++.
T Consensus 54 ~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 54 LWLLFLGLLGTALAYLLYFYALKYISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLI 124 (126)
T ss_pred hhhhHhhccceehHHHHHHHHHHhcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHH
Confidence 3466688774 999999999999999999999999999999999999999999999999999999997653
No 24
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=97.92 E-value=5.6e-05 Score=70.15 Aligned_cols=95 Identities=16% Similarity=0.103 Sum_probs=79.8
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCC
Q 019709 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLK 265 (337)
Q Consensus 186 f~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~ 265 (337)
..+.|++=+.+..+.+.|.+|++.....++.++.-.|+++++.+++|+|.++.|++|+++.++|+++...++.
T Consensus 73 ~~~~g~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~~~~------- 145 (256)
T TIGR00688 73 LLLCGLLIGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIVLKG------- 145 (256)
T ss_pred HHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHcC-------
Confidence 4556777778889999999999999999999999999999999999999999999999999999887654311
Q ss_pred CcchHHHHHHHHHhHHHHHHHHHHHH
Q 019709 266 GAGIFWSLLMIVSFLLQAADTVLKEV 291 (337)
Q Consensus 266 ~~~vlw~lL~llS~ip~AlSnV~kE~ 291 (337)
+. .++.+++.+.+|+.+++.++
T Consensus 146 ~~----~~~~l~aa~~~a~~~i~~~~ 167 (256)
T TIGR00688 146 SL----PWEALVLAFSFTAYGLIRKA 167 (256)
T ss_pred Cc----hHHHHHHHHHHHHHHHHHhh
Confidence 11 13567889999998888776
No 25
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=97.90 E-value=3.6e-05 Score=74.39 Aligned_cols=145 Identities=17% Similarity=0.183 Sum_probs=107.8
Q ss_pred CccchH-hhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec----C
Q 019709 183 KAPFVA-VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS----G 257 (337)
Q Consensus 183 k~kf~i-~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s----g 257 (337)
++++++ =|+.-..|-.++++|+.|.|.+=..+...++-.+|.++++++||.||+.++-+|..+.+.|+++.+=| |
T Consensus 96 ~R~~LiLRg~mG~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPpFlFG 175 (346)
T KOG4510|consen 96 KRKWLILRGFMGFTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPPFLFG 175 (346)
T ss_pred cEEEEEeehhhhhhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCCcccC
Confidence 345544 57778889999999999999999999999999999999999999999999999999999999999877 3
Q ss_pred CCCC--CC-CCCcchHHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCC-CCeEEEeehh---hHHHHHHHHhhhccccc
Q 019709 258 SNPG--HS-LKGAGIFWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGG-VDLFVVNSYG---SAFQVSFVYMPSSTFSV 330 (337)
Q Consensus 258 s~~g--~s-~~~~~vlw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~-ldif~vn~w~---s~fQ~l~~~lllPi~sl 330 (337)
+... ++ ..+....+...-+.|..+.|--.++-.++ +| .|.+.-.++- .+-..+++|..+|=..+
T Consensus 176 ~~t~g~~~s~~~~~~~gt~aai~s~lf~asvyIilR~i---------Gk~~h~~msvsyf~~i~lV~s~I~~~~ig~~~l 246 (346)
T KOG4510|consen 176 DTTEGEDSSQVEYDIPGTVAAISSVLFGASVYIILRYI---------GKNAHAIMSVSYFSLITLVVSLIGCASIGAVQL 246 (346)
T ss_pred CCccccccccccccCCchHHHHHhHhhhhhHHHHHHHh---------hccccEEEEehHHHHHHHHHHHHHHhhccceec
Confidence 3221 11 11333455666666666655444443332 34 8877766654 33445678889999999
Q ss_pred cccCCC
Q 019709 331 KIMGYS 336 (337)
Q Consensus 331 p~~g~~ 336 (337)
|+=|.|
T Consensus 247 P~cgkd 252 (346)
T KOG4510|consen 247 PHCGKD 252 (346)
T ss_pred Cccccc
Confidence 987765
No 26
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.65 E-value=0.00013 Score=70.83 Aligned_cols=176 Identities=15% Similarity=0.187 Sum_probs=131.3
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHhCC--CCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHh
Q 019709 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVP--LKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV 189 (337)
Q Consensus 112 ~~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~--~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~ 189 (337)
.+-....+++.+....=..|-++.-+..+. ++.|.|+++..+...|..+.... ++ .+.++.+-+||+-|.++
T Consensus 39 pkw~QFlic~~g~Ff~Yl~yGy~qElif~~~gfkp~GWylTlvQf~~Ysg~glie---~~---~~~~k~r~iP~rtY~~l 112 (367)
T KOG1582|consen 39 PKWTQFLICSAGVFFLYLVYGYLQELIFNVEGFKPFGWYLTLVQFLVYSGFGLIE---LQ---LIQTKRRVIPWRTYVIL 112 (367)
T ss_pred chhhhHHHHHhHHHHHHHHHHHHHHHHhccccCcccchHHHHHHHHHHHhhhheE---EE---eecccceecchhHhhhh
Confidence 344455666666666666666666666664 56899999998887776443211 11 13445677899999999
Q ss_pred hHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcch
Q 019709 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (337)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~v 269 (337)
+++-+-..-|..-...|+.=+-|.+.-|.-+.=+|+-..++=++||.+..+..+.+..+|++.--..|+...+ .=..
T Consensus 113 a~~t~gtmGLsn~SlgYLNYPtQviFKccKliPVmiggifIqGkRY~v~d~~aA~lm~lGli~FTLADs~~sP---NF~~ 189 (367)
T KOG1582|consen 113 AFLTVGTMGLSNGSLGYLNYPTQVIFKCCKLIPVMIGGIFIQGKRYGVHDYIAAMLMSLGLIWFTLADSQTSP---NFNL 189 (367)
T ss_pred HhhhhhccccCcCccccccCcHHHHHHhhhhhhhhheeeeeccccccHHHHHHHHHHHHHHHhhhhcccccCC---Ccce
Confidence 9998888888888888999999999999999999999999999999999999999999999987776553322 2335
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHH
Q 019709 270 FWSLLMIVSFLLQAADTVLKEVIFLDA 296 (337)
Q Consensus 270 lw~lL~llS~ip~AlSnV~kE~~F~~~ 296 (337)
.|..++-.+-+..|+--=.||+.++++
T Consensus 190 ~Gv~mIsgALl~DA~iGNvQEk~m~~~ 216 (367)
T KOG1582|consen 190 IGVMMISGALLADAVIGNVQEKAMKMN 216 (367)
T ss_pred eeHHHHHHHHHHHHHhhHHHHHHHhhC
Confidence 555555556666777666799988764
No 27
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=97.41 E-value=9.2e-05 Score=70.59 Aligned_cols=172 Identities=16% Similarity=0.209 Sum_probs=117.2
Q ss_pred ccccchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHh
Q 019709 110 SNDRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV 189 (337)
Q Consensus 110 ~~~~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~ 189 (337)
+..|.+. ....++-+-+++|.|+.|.... +|. +.|..+.|-|-|+.-
T Consensus 45 ~~~E~FT--falaLVf~qC~~N~vfAkvl~~--------------------------ir~-----~~~~D~t~~~~YaAc 91 (337)
T KOG1580|consen 45 ESIEKFT--FALALVFFQCTANTVFAKVLFL--------------------------IRK-----KTEIDNTPTKMYAAC 91 (337)
T ss_pred cchheeh--HHHHHHHHHHHHHHHHHHhhee--------------------------ecc-----cccccCCcchHHHHH
Confidence 3344444 3344455567889988887643 121 123344566777776
Q ss_pred hHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcch
Q 019709 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (337)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~v 269 (337)
++--.++-.-..-|.+|+|-+-|.+=...--.=+|++-.+|+||.|++.+|.+++.+++|+++-..-...-++.....-.
T Consensus 92 s~sYLlAMVssN~Alq~vpYPTqVlgKScKPIPVMilGVl~~~KsY~w~kY~cVL~IV~GValFmYK~~Kv~g~e~~t~g 171 (337)
T KOG1580|consen 92 SASYLLAMVSSNQALQYVPYPTQVLGKSCKPIPVMILGVLFAHKSYHWRKYCCVLMIVVGVALFMYKENKVGGAEDKTFG 171 (337)
T ss_pred HHHHHHHHHhccchhcccCCcHHHhcccCCCcceeeeehhhhcccccHHHHHHHHHHHHHHHHhhccccccCCCcccccc
Confidence 66666666667778889988876655444444478999999999999999999999999999887642111112234457
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHH
Q 019709 270 FWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAF 316 (337)
Q Consensus 270 lw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~f 316 (337)
+|-+|.++|-...++..+.||.+=..| +-.+.--.++.|.|.+++
T Consensus 172 ~GElLL~lSL~mDGlTg~~Qdrira~y--q~~g~~MM~~~NlwStL~ 216 (337)
T KOG1580|consen 172 FGELLLILSLAMDGLTGSIQDRIRASY--QRTGTSMMFYTNLWSTLY 216 (337)
T ss_pred hHHHHHHHHHHhcccchhHHHHHHHhh--ccCchhhHHHHHHHHHHH
Confidence 889999999999999999999963333 111123467788887776
No 28
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=97.38 E-value=0.0037 Score=60.01 Aligned_cols=103 Identities=20% Similarity=0.119 Sum_probs=83.7
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhcc-hhHHHHHHHHHHHhccccceee----eehhhheeeceeeEeecCCCCCCC
Q 019709 189 VGLLEALAAATGMAAGAILSGASIPILSQ-TFLVWQILLSIIFLGRRYRVNQ----LFGCFLVGIGVIITVASGSNPGHS 263 (337)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q-~~IP~tmIlS~ifLk~RY~~~q----i~G~~IVl~Gviv~v~sgs~~g~s 263 (337)
-|++-+.+|++.+.|.+++..+....+.+ ....+..+++.+++|+|.+..+ ++|++++++|++++..++.++.+.
T Consensus 65 ~G~~w~ig~~~~~~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~~~~~~~~g~~l~l~G~~l~~~~~~~~~~~ 144 (290)
T TIGR00776 65 SGAFWALGQINQFKSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSIQTLLGLLALILIIIGVYLTSRSKDKSAGI 144 (290)
T ss_pred HHHHHHhhhhhHHHHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchHHHHHHHHHHHHHHHhHheEEecccccccc
Confidence 34558899999999999999999988888 6667899999999999999999 999999999988887664222110
Q ss_pred CC-CcchHHHHHHHHHhHHHHHHHHHHHH
Q 019709 264 LK-GAGIFWSLLMIVSFLLQAADTVLKEV 291 (337)
Q Consensus 264 ~~-~~~vlw~lL~llS~ip~AlSnV~kE~ 291 (337)
.+ .+...+.++-++|.+.+|...+.-+.
T Consensus 145 ~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~ 173 (290)
T TIGR00776 145 KSEFNFKKGILLLLMSTIGYLVYVVVAKA 173 (290)
T ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHH
Confidence 10 33466899999999999999988885
No 29
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.33 E-value=0.00029 Score=68.55 Aligned_cols=75 Identities=24% Similarity=0.425 Sum_probs=66.2
Q ss_pred cchHhh-HHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCC
Q 019709 185 PFVAVG-LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSN 259 (337)
Q Consensus 185 kf~i~G-llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~ 259 (337)
+..+.| +++++|..+.+.|+.+.|.++.+-|....++++++++.++||+|.+..+++|+.+|++|.++.+..+..
T Consensus 51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~~ 126 (300)
T PF05653_consen 51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAPK 126 (300)
T ss_pred HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCCC
Confidence 344455 357899999999999999999999999999999999999999999999999999999998887765443
No 30
>COG2510 Predicted membrane protein [Function unknown]
Probab=97.23 E-value=0.0018 Score=56.46 Aligned_cols=132 Identities=23% Similarity=0.284 Sum_probs=90.6
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHh-hHHHHHHH
Q 019709 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAV-GLLEALAA 197 (337)
Q Consensus 119 i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~-GllDal~~ 197 (337)
++.++--.+.....|+.|+-.+.+- |-|-+..-+++-......+++. +..-..+.| ..-+.|-|+++ |+.-.++-
T Consensus 6 ~~ALLsA~fa~L~~iF~KIGl~~vd--p~~At~IRtiVi~~~l~~v~~~-~g~~~~~~~-~~~k~~lflilSGla~glsw 81 (140)
T COG2510 6 IYALLSALFAGLTPIFAKIGLEGVD--PDFATTIRTIVILIFLLIVLLV-TGNWQAGGE-IGPKSWLFLILSGLAGGLSW 81 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHhccccC--ccHHHHHHHHHHHHHHHHHHHh-cCceecccc-cCcceehhhhHHHHHHHHHH
Confidence 4445555667778899999888543 3333444443333322222222 211111212 22223567665 46677888
Q ss_pred HHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEe
Q 019709 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (337)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v 254 (337)
++-+.|...=..+...-++-.+..++.++|++|||.|.+..+++|+.++++|.+++.
T Consensus 82 l~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs 138 (140)
T COG2510 82 LLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEe
Confidence 888889888888888899999999999999999999999999999999999988764
No 31
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=97.11 E-value=0.018 Score=54.94 Aligned_cols=157 Identities=12% Similarity=0.005 Sum_probs=97.0
Q ss_pred HHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHH
Q 019709 117 IVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALA 196 (337)
Q Consensus 117 v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal~ 196 (337)
+..+.+++++.+ .|.++.|...+.+.... +..+-...=.++.+++ ..+.+. ..+++ .+++.++.|++-...
T Consensus 14 ~~~~~la~~~~~-~~~~~~K~~~~~~~~~~--~~~~R~~~a~l~l~~~-~~~~~~-~~~~~----~~~~~~~~g~~~~~~ 84 (293)
T PRK10532 14 ILLLLIAMASIQ-SGASLAKSLFPLVGAPG--VTALRLALGTLILIAI-FKPWRL-RFAKE----QRLPLLFYGVSLGGM 84 (293)
T ss_pred HHHHHHHHHHHH-hhHHHHHHHHHHcCHHH--HHHHHHHHHHHHHHHH-HhHHhc-cCCHH----HHHHHHHHHHHHHHH
Confidence 455566666666 56668998887433322 2222221111111222 111111 11111 123456788888888
Q ss_pred HHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcchHHHHHHH
Q 019709 197 AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMI 276 (337)
Q Consensus 197 ~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~vlw~lL~l 276 (337)
+.+.+.|.+|+|.....++..+...++++++ ++|.+ +..++.+.++|+.+...++.+. ++....|+++.+
T Consensus 85 ~~~~~~al~~~~~~~a~~l~~t~Pi~~~ll~----~~~~~--~~~~~~i~~~Gv~li~~~~~~~----~~~~~~G~ll~l 154 (293)
T PRK10532 85 NYLFYLSIQTVPLGIAVALEFTGPLAVALFS----SRRPV--DFVWVVLAVLGLWFLLPLGQDV----SHVDLTGAALAL 154 (293)
T ss_pred HHHHHHHHhcccHHHHHHHHHHHHHHHHHHh----cCChH--HHHHHHHHHHHHheeeecCCCc----ccCChHHHHHHH
Confidence 8889999999999988888877777777766 35544 4556777888887766443221 123467999999
Q ss_pred HHhHHHHHHHHHHHHH
Q 019709 277 VSFLLQAADTVLKEVI 292 (337)
Q Consensus 277 lS~ip~AlSnV~kE~~ 292 (337)
++.+.+|+.+++-.+.
T Consensus 155 ~aa~~~a~~~v~~r~~ 170 (293)
T PRK10532 155 GAGACWAIYILSGQRA 170 (293)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999986654
No 32
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=97.04 E-value=0.0033 Score=57.75 Aligned_cols=65 Identities=25% Similarity=0.311 Sum_probs=58.9
Q ss_pred chHhhHHH-HHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeece
Q 019709 186 FVAVGLLE-ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGV 250 (337)
Q Consensus 186 f~i~GllD-al~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gv 250 (337)
.+..|.+. ..+..+.+.|..+++......+.....++++++++++++++.+..|++|+.+++.|+
T Consensus 194 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 194 LLYLGLIGTALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 45577665 678888899999999999999999999999999999999999999999999999886
No 33
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=96.86 E-value=0.0048 Score=52.32 Aligned_cols=69 Identities=26% Similarity=0.359 Sum_probs=62.3
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceee
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv 252 (337)
..+++.|++=..-|+..+....+|++...++++..--+.+.++|.++++.+.+..+++|..++++|..+
T Consensus 82 ~~~~~~~~~~~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 82 FLLILSGLLAFLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHhe
Confidence 345557777788888888889999999999999999999999999999999999999999999999764
No 34
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=96.67 E-value=0.009 Score=58.89 Aligned_cols=169 Identities=15% Similarity=0.212 Sum_probs=121.0
Q ss_pred HHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCC----ccchHhhHHH
Q 019709 118 VIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK----APFVAVGLLE 193 (337)
Q Consensus 118 ~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk----~kf~i~GllD 193 (337)
+.+++++-.+..+=+-.+|-.... .+||-|.+.++..+-. .|+.+..+-+....++....+.| ++.+.-|++-
T Consensus 18 L~lVl~yY~~Si~Ltf~~~~~~~~-f~fPLf~ts~h~~v~f--lfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat 94 (349)
T KOG1443|consen 18 LALVLLYYFLSIGLTFYFKWLTKN-FHFPLFVTSLHLAVKF--LFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT 94 (349)
T ss_pred HHHHHHHHHHHHHHHHHhhhhhcC-cCCchHHHHHHHHHHH--HHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh
Confidence 334456666666656666665443 7899998887764322 23333333222223333334444 3344666777
Q ss_pred HHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcchHHHH
Q 019709 194 ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSL 273 (337)
Q Consensus 194 al~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~vlw~l 273 (337)
+.---+...+..|++.+.+.|-.-++|.|.+++|.+|-=.|+++.=.+=++++.+|+++...-.+ +-.+.|-+
T Consensus 95 a~DIGLSN~sl~yVtlSlYTM~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~KsT-------qf~i~Gf~ 167 (349)
T KOG1443|consen 95 ALDIGLSNWSLEYVTLSLYTMTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKST-------QFNIEGFF 167 (349)
T ss_pred hcccccccceeeeeeeeeeeeccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEeccc-------ceeehhHH
Confidence 77777899999999999999999999999999999998888888777777888888888776422 23467888
Q ss_pred HHHHHhHHHHHHHHHHHHHhHHH
Q 019709 274 LMIVSFLLQAADTVLKEVIFLDA 296 (337)
Q Consensus 274 L~llS~ip~AlSnV~kE~~F~~~ 296 (337)
++..+....++-=.+-.++.+|.
T Consensus 168 lv~~aS~~sGlRW~~tQ~ll~~~ 190 (349)
T KOG1443|consen 168 LVLAASLLSGLRWAFTQMLLRNQ 190 (349)
T ss_pred HHHHHHHhhhhhHHHHHHHHhcC
Confidence 99999999999999999998874
No 35
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.64 E-value=0.01 Score=57.87 Aligned_cols=110 Identities=14% Similarity=0.166 Sum_probs=86.7
Q ss_pred hccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcchHHHHHHHHHhHHHH
Q 019709 204 GAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQA 283 (337)
Q Consensus 204 ~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~vlw~lL~llS~ip~A 283 (337)
+.|.+.+-.++=+....||++++++.+||.|=+..-+.||.++++|..+ |.+.+++.+.-.+.|.++-++|++.-|
T Consensus 123 L~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~l----GvdqE~~~~~ls~~GvifGVlaSl~vA 198 (347)
T KOG1442|consen 123 LKYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFFALGCCLLIILGFGL----GVDQEGSTGTLSWIGVIFGVLASLAVA 198 (347)
T ss_pred hhhcceEEEEeccchhhhHHHHhHHhhcccccccccceeehhheehhee----ccccccccCccchhhhHHHHHHHHHHH
Confidence 4588888888999999999999999999999999999999999998776 555555566778899999999999999
Q ss_pred HHHHHHHHHhHHHHHhhcCC-CC-eEEEeehhhHHHHHHHHhhhccc
Q 019709 284 ADTVLKEVIFLDAAQRLKGG-VD-LFVVNSYGSAFQVSFVYMPSSTF 328 (337)
Q Consensus 284 lSnV~kE~~F~~~~~~lk~~-ld-if~vn~w~s~fQ~l~~~lllPi~ 328 (337)
+-.++-.+.. .+ .| +|.+..+.+++..+ |.+|.+
T Consensus 199 lnaiytkk~l--------~~v~~~iw~lt~ynnv~a~l---Lflpll 234 (347)
T KOG1442|consen 199 LNAIYTKKVL--------PPVGDCIWRLTAYNNVNALL---LFLPLL 234 (347)
T ss_pred HHHHhhheec--------ccccCeehhhHHHHHHHHHH---HHHHHH
Confidence 8887766432 34 55 56666677877543 445543
No 36
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=96.64 E-value=0.034 Score=54.80 Aligned_cols=187 Identities=19% Similarity=0.230 Sum_probs=123.8
Q ss_pred cchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHH--HhhhhHHHHHHHHHHHHHhcCccchhhhcCCC-ccchHh
Q 019709 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQ--LATFGYVAVYFSILYLRYHAGIVTDEMLSMPK-APFVAV 189 (337)
Q Consensus 113 ~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q--~~t~~y~~vyf~il~~r~~~~~it~em~~~pk-~kf~i~ 189 (337)
+..+-+...+.+.+....-++.-|..... .+||.++.. .|++..+++- +.-.+.|-+.-|.++... ||++.+
T Consensus 9 ~~~~~l~sa~~Y~~sS~lm~vvNK~vls~-y~f~~~l~l~~~Q~l~s~~~v----~~lk~~~lv~~~~l~~~~~kk~~P~ 83 (314)
T KOG1444|consen 9 KQSSPLLSALFYCLSSILMTVVNKIVLSS-YNFPMGLLLMLLQSLASVLVV----LVLKRLGLVNFRPLDLRTAKKWFPV 83 (314)
T ss_pred hhhhhhHHHHHHHHHHHHHHHHHHHHHhc-CCCcHHHHHHHHHHHHHHHHH----HHHHHhceeecCCcChHHHHHHccH
Confidence 33444577888888899999999988763 355555444 5665555442 222233333333322222 456667
Q ss_pred hHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcch
Q 019709 190 GLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGI 269 (337)
Q Consensus 190 GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~v 269 (337)
.++=...-+.+..+.+|.+.++..+++..++..+++.=..|+|+|.+..-+..++..++|-.....++. +....+.
T Consensus 84 ~~lf~~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~~~d~----sf~~~gY 159 (314)
T KOG1444|consen 84 SLLFVGMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAAFTDL----SFNLRGY 159 (314)
T ss_pred HHHHHHHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhccccc----eecchhH
Confidence 777778888899999999999999999999999999999999999999999988888887776665532 1222234
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHH
Q 019709 270 FWSLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQ 317 (337)
Q Consensus 270 lw~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ 317 (337)
.|.. +.++..|.-.++-++..+. .+.+-+-+..+.+++-
T Consensus 160 ~w~~---~n~~~~a~~~v~~kk~vd~------~~l~~~~lv~yNnl~~ 198 (314)
T KOG1444|consen 160 SWAL---ANCLTTAAFVVYVKKSVDS------ANLNKFGLVFYNNLLS 198 (314)
T ss_pred HHHH---HHHHHHHHHHHHHHHhhcc------ccccceeEEeehhHHH
Confidence 5544 4555556666666653321 1255555555555553
No 37
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=96.37 E-value=0.009 Score=57.34 Aligned_cols=136 Identities=19% Similarity=0.172 Sum_probs=86.5
Q ss_pred HHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccc---hhhhcCCC--ccchHhh
Q 019709 116 EIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVT---DEMLSMPK--APFVAVG 190 (337)
Q Consensus 116 ~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it---~em~~~pk--~kf~i~G 190 (337)
-++++.+.+ +++....+..|...++.+..++-+-..+++.-++..+.....-. .+... +-....|. +..++..
T Consensus 155 G~~ll~~sl-~~~a~~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~-~~~~~~~~~f~~~~p~~~~~l~~~s 232 (303)
T PF08449_consen 155 GIILLLLSL-LLDAFTGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLP-TGEFRSAIRFISAHPSVLLYLLLFS 232 (303)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHH-hhHhhHHHHHHHHhHHHHHHHHHHH
Confidence 344444444 44555666677777766666643333333222222222211100 11000 01112222 3455677
Q ss_pred HHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeE
Q 019709 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (337)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~ 253 (337)
++-++++...+.-...++.....+....--+.++++|.++.+++++..||+|++++.+|+.+-
T Consensus 233 ~~~~~g~~~i~~~~~~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~ 295 (303)
T PF08449_consen 233 LTGALGQFFIFYLIKKFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLY 295 (303)
T ss_pred HHHHHHHHHHHHHHHhcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHH
Confidence 778888888887777888888999999999999999999999999999999999999987653
No 38
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=96.08 E-value=0.013 Score=53.54 Aligned_cols=107 Identities=18% Similarity=0.065 Sum_probs=71.6
Q ss_pred HhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCc
Q 019709 188 AVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGA 267 (337)
Q Consensus 188 i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~ 267 (337)
+++..=...+.+...+..+..+.-.+.. |.-+..+++++...+++|.+..|+.+......|+.++-...........++
T Consensus 4 vPa~~~~~s~~l~~v~l~~~~~~~~~~~-~~~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~~~~~~~~g~ 82 (222)
T TIGR00803 4 VPIHIIFKQNNLVLIALGNLLAAGKQVT-QLKILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQSSAKTLMFGN 82 (222)
T ss_pred ccchHHHHhcchHHHHHhcccccceeee-hHHHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCCCcccccccc
Confidence 3444445566666666666666666666 777778888888888888888887777666666554433221111112345
Q ss_pred chHHHHHHHHHhHHHHHHHHHHHHHhHH
Q 019709 268 GIFWSLLMIVSFLLQAADTVLKEVIFLD 295 (337)
Q Consensus 268 ~vlw~lL~llS~ip~AlSnV~kE~~F~~ 295 (337)
.+.+....+.++...++..+|+|+.+|+
T Consensus 83 ~~~g~~~~l~a~~~~~~~~~y~e~~~k~ 110 (222)
T TIGR00803 83 PVVGLSAVLSALLSSGFAGVYFEKILKD 110 (222)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHcccC
Confidence 6677777888899999999999998654
No 39
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=95.93 E-value=0.0094 Score=56.35 Aligned_cols=64 Identities=28% Similarity=0.413 Sum_probs=58.8
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceee
Q 019709 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (337)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv 252 (337)
.+++...+..+.+.+.++.+.+....+.+...++..+++++++|++.+..|++|+.++++|+.+
T Consensus 217 ~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 217 GGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 4466788888999999999999999999999999999999999999999999999999999764
No 40
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.39 E-value=0.02 Score=56.63 Aligned_cols=70 Identities=20% Similarity=0.315 Sum_probs=61.1
Q ss_pred hHhhHH-HHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 187 VAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 187 ~i~Gll-Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
...|++ =.+|.+.-+.||.+-|.++..-|....++.+.+++.+|||+|.+..-.+||++|++|-.+.+.-
T Consensus 67 Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~h 137 (335)
T KOG2922|consen 67 WWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIH 137 (335)
T ss_pred HHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEe
Confidence 334433 4468888999999999999999999999999999999999999999999999999996666654
No 41
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=95.34 E-value=0.0092 Score=49.98 Aligned_cols=64 Identities=13% Similarity=0.048 Sum_probs=55.0
Q ss_pred HHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEe
Q 019709 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (337)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v 254 (337)
.+-..+.++...+....|.+....+-+....++++++++++|.|.+..|++|..++++|+++..
T Consensus 45 ~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~ 108 (111)
T PRK15051 45 ACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILG 108 (111)
T ss_pred HHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHh
Confidence 4456677778888888888887666679999999999999999999999999999999987653
No 42
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=94.97 E-value=0.11 Score=49.56 Aligned_cols=70 Identities=19% Similarity=0.149 Sum_probs=60.6
Q ss_pred hHhhHHHH-HHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 187 VAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 187 ~i~GllDa-l~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
+.+|++-. .+..+.+.+.++++.+...++.....++.+++++++++++.+..|++|+.++++|++.....
T Consensus 212 l~lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~ 282 (293)
T PRK10532 212 LAVAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLT 282 (293)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhc
Confidence 45776654 55557799999999999999999999999999999999999999999999999987775443
No 43
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=94.91 E-value=0.068 Score=53.34 Aligned_cols=68 Identities=12% Similarity=0.188 Sum_probs=58.7
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
.|..-.++-.+-+.+..+.+++-..+......++++++++++|+++.+..|++|++++++|+.++..+
T Consensus 262 ~~i~t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~~~ 329 (358)
T PLN00411 262 MAIITSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVMWG 329 (358)
T ss_pred HHHHHHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence 44444556666777888999999999999999999999999999999999999999999999887654
No 44
>PRK11689 aromatic amino acid exporter; Provisional
Probab=94.86 E-value=0.053 Score=51.78 Aligned_cols=71 Identities=11% Similarity=0.005 Sum_probs=62.6
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 186 f~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
.+..|+.-.++.++.+.+.++++++...++.-...++.+++++++|+++.+..|++|++++++|+.+....
T Consensus 218 l~~~~~~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~ 288 (295)
T PRK11689 218 LLLAAAAMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLA 288 (295)
T ss_pred HHHHHHHHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhh
Confidence 34456667778888899999999999999999999999999999999999999999999999998776544
No 45
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=94.24 E-value=0.14 Score=46.76 Aligned_cols=70 Identities=27% Similarity=0.385 Sum_probs=62.0
Q ss_pred cchHhhHHHH-HHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEe
Q 019709 185 PFVAVGLLEA-LAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (337)
Q Consensus 185 kf~i~GllDa-l~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v 254 (337)
.....|++.. ++.++...+....+.....++....+++.+++++++++++.+..|++|+.+++.|+.+..
T Consensus 216 ~~~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~ 286 (292)
T COG0697 216 LLLYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLAS 286 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHh
Confidence 4566777777 689999999999999999999988899999999999999999999999999998876643
No 46
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.12 E-value=0.22 Score=45.48 Aligned_cols=67 Identities=13% Similarity=0.155 Sum_probs=60.8
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceee
Q 019709 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (337)
Q Consensus 186 f~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv 252 (337)
...+.++-+.++.++.....|.+.....+....-+.++.++|+++.++..+..|++|+.+|+.|+.+
T Consensus 155 ~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 155 VWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred HHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 4456677888889988888899999999999999999999999999999999999999999999865
No 47
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=93.73 E-value=0.19 Score=49.56 Aligned_cols=63 Identities=11% Similarity=0.058 Sum_probs=53.1
Q ss_pred hHHHHHHHHHH----HhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceee
Q 019709 190 GLLEALAAATG----MAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (337)
Q Consensus 190 GllDal~~~L~----viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv 252 (337)
.++-.+..++. +.+..++++....+.+..--++++++++++++...+..|++|++++++|+++
T Consensus 279 i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~l 345 (350)
T PTZ00343 279 IFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALL 345 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHH
Confidence 33344444443 4588899999999999999999999999999999999999999999999864
No 48
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=93.32 E-value=0.3 Score=46.45 Aligned_cols=68 Identities=12% Similarity=0.026 Sum_probs=59.4
Q ss_pred chHhhHH-HHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeE
Q 019709 186 FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (337)
Q Consensus 186 f~i~Gll-Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~ 253 (337)
.+.+|++ -+.+..+...+.++.+.+...++.....++.+++++++++++.+..|++|+++++.|+++.
T Consensus 215 i~~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~ 283 (292)
T PRK11272 215 LGYLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLV 283 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHH
Confidence 3445554 5567778888999999999999999999999999999999999999999999999998764
No 49
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=93.32 E-value=0.11 Score=48.95 Aligned_cols=116 Identities=19% Similarity=0.179 Sum_probs=87.0
Q ss_pred HHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCCCCCCCcchHHHH
Q 019709 194 ALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPGHSLKGAGIFWSL 273 (337)
Q Consensus 194 al~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g~s~~~~~vlw~l 273 (337)
..+|++-..|+.-.+++...-+.+..--|+-+++++.||.|+...+++.+.+.+.|+++....|.. + ..++++..
T Consensus 64 t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~--~---a~e~iGi~ 138 (290)
T KOG4314|consen 64 TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE--H---ADEIIGIA 138 (290)
T ss_pred ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch--h---hhhhhhHH
Confidence 348999999999999999999999999999999999999999999999999999999988766421 1 34688888
Q ss_pred HHHHHhHHHHHHHHHHHHHhHHHHHhhcCC--CCeEEEeehhhHHHHHHH
Q 019709 274 LMIVSFLLQAADTVLKEVIFLDAAQRLKGG--VDLFVVNSYGSAFQVSFV 321 (337)
Q Consensus 274 L~llS~ip~AlSnV~kE~~F~~~~~~lk~~--ldif~vn~w~s~fQ~l~~ 321 (337)
..+.|+...|+--|. ||.. +++. -|.-.+.+.-++|.+++.
T Consensus 139 ~AV~SA~~aAlYKV~----FK~~---iGnAn~Gdaa~FmS~LGF~NL~~~ 181 (290)
T KOG4314|consen 139 CAVGSAFMAALYKVL----FKMF---IGNANFGDAAHFMSCLGFFNLCFI 181 (290)
T ss_pred HHHHHHHHHHHHHHH----HHHH---hccCcchhHHHHHHHHHHHHHHHH
Confidence 888888776655444 4332 2222 344444555556665544
No 50
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=93.10 E-value=0.033 Score=53.26 Aligned_cols=72 Identities=15% Similarity=0.233 Sum_probs=64.6
Q ss_pred chHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecC
Q 019709 186 FVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (337)
Q Consensus 186 f~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sg 257 (337)
++..|..-+.+..+.+.|+++.+.+...++.-...++.+++++++++++.+..|++|+.++++|+.+...++
T Consensus 216 ~~~~g~~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 216 LIAAGIVTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 334566788999999999999999999999999999999999999999999999999999988887766553
No 51
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=92.73 E-value=0.1 Score=44.44 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=63.3
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHH-HHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEe
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~~-~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v 254 (337)
|+|+++=++..+|.++-+.....++.++. ++-+.....+|++..+++-++.-+...++|+.+++.|+.+++
T Consensus 42 ~~y~ipf~lNq~GSv~f~~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lcv 113 (113)
T PF10639_consen 42 PKYIIPFLLNQSGSVLFFLLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALCV 113 (113)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeeeC
Confidence 68999889999999999999999999986 566899999999999887777778888999999999998763
No 52
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=92.68 E-value=0.084 Score=50.72 Aligned_cols=72 Identities=19% Similarity=0.140 Sum_probs=65.0
Q ss_pred ccchHhhHHHHHHHHHHHhhhc-cccccHHHHhcchhHHHHHHHHHHHhccccceeee----ehhhheeeceeeEee
Q 019709 184 APFVAVGLLEALAAATGMAAGA-ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVIITVA 255 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~-ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi----~G~~IVl~Gviv~v~ 255 (337)
|+-++.|++-..++.+.+.+.+ +.+.+...++.|.-.+...+++++++|++.+..|+ +|+++++.|+++...
T Consensus 212 ~~~~~~Gi~~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~~~ 288 (290)
T TIGR00776 212 LLNILPGLMWGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANILGI 288 (290)
T ss_pred HHHHHHHHHHHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHHhc
Confidence 4556689888999999999999 99999999999999999999999999999999999 999999999877543
No 53
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=92.64 E-value=0.36 Score=41.64 Aligned_cols=116 Identities=15% Similarity=0.139 Sum_probs=71.2
Q ss_pred HHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhh-HHHHHHH
Q 019709 119 IAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVG-LLEALAA 197 (337)
Q Consensus 119 i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~G-llDal~~ 197 (337)
++++.-+++++.-.++.|...+++++-+.....+.. .+ ... .| ..+++.| .+-+++-
T Consensus 5 ~~i~~sv~l~~~gQl~~K~g~~~~g~~~~~~~~~~~------~~-----~~~----------~p-~~~i~lgl~~~~la~ 62 (129)
T PRK02971 5 LWGLASVLLASVAQLSLKWGMSRLPLLSHAWDFIAA------LL-----AFG----------LA-LRAVLLGLAGYALSM 62 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCccchhHHHHH------HH-----HHh----------cc-HHHHHHHHHHHHHHH
Confidence 456666777888899999998877643322210000 00 000 00 0123333 3355555
Q ss_pred HHHHhhhccccccHHHHhcchhHHHHHHHHHH--HhccccceeeeehhhheeeceeeEeec
Q 019709 198 ATGMAAGAILSGASIPILSQTFLVWQILLSII--FLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~i--fLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
++-..+....+.+...-+......++++.++. +++++.+..|++|+.++++|++++..+
T Consensus 63 ~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~ 123 (129)
T PRK02971 63 LCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLP 123 (129)
T ss_pred HHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccC
Confidence 66666666666666544444444567677774 899999999999999999999886543
No 54
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=90.95 E-value=0.51 Score=44.93 Aligned_cols=57 Identities=21% Similarity=0.227 Sum_probs=49.8
Q ss_pred HHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEe
Q 019709 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (337)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v 254 (337)
.+.+.+..++++....++...--++++++++++++++.+..|++|..++++|+.+.-
T Consensus 236 ~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~ 292 (302)
T TIGR00817 236 QVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYS 292 (302)
T ss_pred HHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHH
Confidence 455567889999999999888888888999999999999999999999999987643
No 55
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=89.90 E-value=0.19 Score=43.07 Aligned_cols=73 Identities=10% Similarity=0.139 Sum_probs=59.4
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccH-HHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
+++++.-.+=+++-++...+..+.|.+. +.+....-+..+.+++.+|++.+.+..|++|..++++|++..-..
T Consensus 31 ~~~~~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~ 104 (120)
T PRK10452 31 GGFILMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSG 104 (120)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcC
Confidence 3455566666677777777888888776 466678889999999999999999999999999999999877554
No 56
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=89.18 E-value=1.5 Score=41.83 Aligned_cols=71 Identities=15% Similarity=0.128 Sum_probs=57.2
Q ss_pred chHhhHH-HHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 186 FVAVGLL-EALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 186 f~i~Gll-Dal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
.+.+|++ -+.+-.+.+.+.++.++....++.....++.+++++++|+.+.+..|++|+.++++|+.+...+
T Consensus 217 l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~ 288 (299)
T PRK11453 217 LMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFG 288 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcc
Confidence 3445544 3455556667778888888888888888999999999999999999999999999998876544
No 57
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=88.00 E-value=4.5 Score=38.30 Aligned_cols=129 Identities=13% Similarity=0.119 Sum_probs=83.4
Q ss_pred chHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHH-HHHHhcCccchhhhcCCC--ccchHhh
Q 019709 114 RVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSIL-YLRYHAGIVTDEMLSMPK--APFVAVG 190 (337)
Q Consensus 114 ~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il-~~r~~~~~it~em~~~pk--~kf~i~G 190 (337)
-+-+...++..++.|.+....-|+.-.+- -|.+.-.++-+.+-+++..+. +.+. .+.+.++. -+.. +...++-
T Consensus 113 ~~G~~~vl~~~~~S~~agVy~E~~lK~~~--~s~~~~N~qL~~~gi~~~~~~~~~~~-~~~~~~~g-~f~G~~~~~~~~i 188 (244)
T PF04142_consen 113 LLGLLAVLAAAFLSGFAGVYFEKLLKRSN--VSLWIQNMQLYLFGILFNLLALLLSD-GSAISESG-FFHGYSWWVWIVI 188 (244)
T ss_pred HhHHHHHHHHHHHHHHHHHHHHHHhcccc--hhHHHHHHHHHHHHHHHHHHHHhccc-ccccccCC-chhhcchHHHHHH
Confidence 34444555666777888887778765433 444433333233322222222 2221 11222222 1122 2344566
Q ss_pred HHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhhe
Q 019709 191 LLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (337)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IV 246 (337)
++-+.+++++.+-..|.+.-.=..-....|..+.++|.++.+.+++..-++|+.+|
T Consensus 189 ~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~lg~~~V 244 (244)
T PF04142_consen 189 FLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLLGAALV 244 (244)
T ss_pred HHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhhheecC
Confidence 78999999999999999998888899999999999999999999999999998765
No 58
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=87.18 E-value=1.4 Score=42.73 Aligned_cols=71 Identities=21% Similarity=0.192 Sum_probs=59.9
Q ss_pred CCccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeee----ehhhheeeceee
Q 019709 182 PKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQL----FGCFLVGIGVII 252 (337)
Q Consensus 182 pk~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi----~G~~IVl~Gviv 252 (337)
..|+=.+-|++-..+|+...++.+......---|+|..+..+.+...++||++=+..|+ +|++++++|.++
T Consensus 194 ~~~~nil~G~~w~ignl~~~is~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 194 KSWKNILTGLIWGIGNLFYLISAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred chHHhhHHHHHHHHHHHHHHHhHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 34677889999999999999999999989999999999999999999999987665544 567777666554
No 59
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=84.78 E-value=0.87 Score=38.43 Aligned_cols=69 Identities=12% Similarity=0.006 Sum_probs=57.7
Q ss_pred cchHhhHHHHHHHHHHHhhhccccccH-HHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeE
Q 019709 185 PFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (337)
Q Consensus 185 kf~i~GllDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~ 253 (337)
+.+++-.+=+++-++.-.|.++.|... +.+-.+.-+..+.+.+.++.|.+.+..|++|..++++|++..
T Consensus 37 ~~~~~~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~l 106 (109)
T PRK10650 37 YGILSLAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHh
Confidence 344555666777788888888888776 578888889999999999999999999999999999998754
No 60
>PF12398 DUF3660: Receptor serine/threonine kinase ; InterPro: IPR022126 This domain family is found in eukaryotes, and is approximately 40 amino acids in length. The family is found in association with PF00954 from PFAM, PF01453 from PFAM, PF00069 from PFAM, PF08276 from PFAM. There is a conserved ELPL sequence motif. ; GO: 0004674 protein serine/threonine kinase activity
Probab=84.21 E-value=0.69 Score=32.95 Aligned_cols=30 Identities=27% Similarity=0.226 Sum_probs=23.8
Q ss_pred eeeecccccCCCceEEEecCCccccccCCC
Q 019709 33 YLRDHHANQRLPTTLLFRSSKRNYYHNNSN 62 (337)
Q Consensus 33 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (337)
||..+++||-+|.-=++-||||++|+|+..
T Consensus 3 ~i~~~~RnQ~llmN~~v~sskr~~s~Enk~ 32 (42)
T PF12398_consen 3 PIVNRQRNQDLLMNGMVLSSKRQLSGENKT 32 (42)
T ss_pred ccccccccccccccceEEeccccccccCcc
Confidence 355567899998777788999999998754
No 61
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=82.89 E-value=5.8 Score=39.61 Aligned_cols=58 Identities=14% Similarity=0.177 Sum_probs=49.4
Q ss_pred HHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 199 TGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 199 L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
++-+...+++++..++=.-++.|+.+++..++-|.+.++..++|.+++++|+++--..
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~ 306 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLA 306 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEcc
Confidence 4445566778887777667889999999999999999999999999999999888764
No 62
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=81.84 E-value=0.91 Score=38.22 Aligned_cols=64 Identities=22% Similarity=0.189 Sum_probs=48.7
Q ss_pred HHHHHHHHHhhhccccccH-HHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 193 EALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 193 Dal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
-+.+-++...|..+.|... +.+..+.-+..+.++++++++.+.+..|++|..++++|++..-..
T Consensus 40 ~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~ 104 (110)
T PRK09541 40 YCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLL 104 (110)
T ss_pred HHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcC
Confidence 3344444455555666655 456667788888999999999999999999999999998876443
No 63
>PF15169 DUF4564: Domain of unknown function (DUF4564)
Probab=81.83 E-value=1.2 Score=41.02 Aligned_cols=56 Identities=21% Similarity=0.351 Sum_probs=44.1
Q ss_pred hccccceeee-ehhhheeeceeeEeecCCCCCCCCCCcchHHHHHHHHHhHHHHHHHHH--HHHHhHH
Q 019709 231 LGRRYRVNQL-FGCFLVGIGVIITVASGSNPGHSLKGAGIFWSLLMIVSFLLQAADTVL--KEVIFLD 295 (337)
Q Consensus 231 Lk~RY~~~qi-~G~~IVl~Gviv~v~sgs~~g~s~~~~~vlw~lL~llS~ip~AlSnV~--kE~~F~~ 295 (337)
|+++.....| +++.|+.+|+.....+ +..++|-++++++|++.|++|+= ||.+|.+
T Consensus 15 Lkrsp~~rsWsl~~gi~siGl~~~yys---------~d~~~wK~fyv~~c~fva~~n~edwee~iFdK 73 (187)
T PF15169_consen 15 LKRSPGIRSWSLLVGIASIGLAAAYYS---------SDSLLWKLFYVAGCLFVALQNMEDWEEAIFDK 73 (187)
T ss_pred EEcCCCccchhhHHHHHhcccceeeec---------CCchHHHHHHHHHHHHHHHhcchhhhheeEec
Confidence 5667777666 4667888898888877 34689999999999999999996 4566643
No 64
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=80.67 E-value=4.6 Score=38.34 Aligned_cols=149 Identities=15% Similarity=0.137 Sum_probs=105.2
Q ss_pred ccccccchHHHHHHHHHHHhhhhhHHHHHHHhC--CCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhh-hcCCCc
Q 019709 108 SKSNDRRVEIVIAAAVTVLLGVGNRVLYKLALV--PLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEM-LSMPKA 184 (337)
Q Consensus 108 ~~~~~~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~--~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em-~~~pk~ 184 (337)
|.+....+-=+.+.+.--.+...-+|++|+..- .+++-..|.+.+..+-.+..+|+-+. .++++-.+.+. -..||-
T Consensus 127 DN~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn~Gdaa~FmS~LGF~NL~~~~~~~lI-L~~T~VE~~qsFA~~PWG 205 (290)
T KOG4314|consen 127 DNEHADEIIGIACAVGSAFMAALYKVLFKMFIGNANFGDAAHFMSCLGFFNLCFISFPALI-LAFTGVEHLQSFAAAPWG 205 (290)
T ss_pred cchhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCcchhHHHHHHHHHHHHHHHHhhhHHH-HHHhchHHHHHHhhCCch
Confidence 334433332233344444455566788888765 36788888888777777777776532 23333322221 235666
Q ss_pred cchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecC
Q 019709 185 PFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (337)
Q Consensus 185 kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sg 257 (337)
...=++.+-..-|++..+|-.-+.+-++.+=.-..||-....-.+|-..-++...+.|..++++|.++...|-
T Consensus 206 ~l~G~A~L~lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~FiLiiiP~ 278 (290)
T KOG4314|consen 206 CLCGAAGLSLAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGFILIIIPE 278 (290)
T ss_pred hhhhHHHHHHHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhHHheeccc
Confidence 6777888888899999999999998888877777899999998888888888889999999999999988883
No 65
>PRK11431 multidrug efflux system protein; Provisional
Probab=73.13 E-value=2.2 Score=35.69 Aligned_cols=66 Identities=17% Similarity=0.059 Sum_probs=52.1
Q ss_pred HhhHHHHHHHHHHHhhhccccccH-HHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeE
Q 019709 188 AVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (337)
Q Consensus 188 i~GllDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~ 253 (337)
++-.+=+.+-++.-.|.+..|... +.+-.+.-+..+.+.++++.|.+.+..|++|..++++|++..
T Consensus 34 ~~i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l 100 (105)
T PRK11431 34 ITVTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhh
Confidence 334445556666666666766655 567777888899999999999999999999999999998765
No 66
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=72.72 E-value=16 Score=37.51 Aligned_cols=110 Identities=14% Similarity=0.224 Sum_probs=79.8
Q ss_pred ChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCc-c---chHhhHH-HHHHHHHHHhhhccccccHHHHhcch
Q 019709 144 HYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKA-P---FVAVGLL-EALAAATGMAAGAILSGASIPILSQT 218 (337)
Q Consensus 144 nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~-k---f~i~Gll-Dal~~~L~viA~~ytsgs~~~LL~q~ 218 (337)
+-+-|+-...-+-+++. |+.++...+.+ .|..++|.. + .++.|++ -+++.++=.+|...|++.+..+=...
T Consensus 278 di~lffGfvGLfnllll-wP~l~iL~~~~---~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSl 353 (416)
T KOG2765|consen 278 DIQLFFGFVGLFNLLLL-WPPLIILDFFG---EERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSL 353 (416)
T ss_pred cHHHHHHHHHHHHHHHH-hHHHHHHHHhc---cCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeE
Confidence 45555554333333333 33333332222 356777763 2 3345544 56788889999999999999999999
Q ss_pred hHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecC
Q 019709 219 FLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (337)
Q Consensus 219 ~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sg 257 (337)
.||..|+.=.++-++.|+..+++|+..+.+|.+++-.++
T Consensus 354 tIPLA~~aD~l~k~~~~S~~~iiGsi~Ifv~Fv~vn~~~ 392 (416)
T KOG2765|consen 354 TIPLAMFADVLIKGKHPSALYIIGSIPIFVGFVIVNISS 392 (416)
T ss_pred eeeHHHHHHHHHcCCCCCHHHHHHHHHHHHHHhheeccc
Confidence 999999999999999999999999999999988887764
No 67
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=71.49 E-value=6.1 Score=31.81 Aligned_cols=56 Identities=16% Similarity=0.103 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhhhccccccHH-HHhcchhHHHHHHHHHHHhccccceeeeehhhhe
Q 019709 191 LLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLV 246 (337)
Q Consensus 191 llDal~~~L~viA~~ytsgs~~-~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IV 246 (337)
.+=..+-++...|..+.|.+.. ++..+.-+..+.+.+.++.|.+.+..|++|..++
T Consensus 37 ~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 37 VGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 3555666777788888888774 7888899999999999999999999999998753
No 68
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=70.54 E-value=7.8 Score=32.89 Aligned_cols=49 Identities=20% Similarity=0.238 Sum_probs=42.7
Q ss_pred cccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 208 SGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 208 sgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
.|=...-=.+..|..++++-+.+=|+|+.++.++|+.+|++|+.+....
T Consensus 56 fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~ 104 (107)
T PF02694_consen 56 FGRVYAAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFA 104 (107)
T ss_pred chhHHHHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEec
Confidence 3445666788999999999999999999999999999999998887653
No 69
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=69.16 E-value=4 Score=34.53 Aligned_cols=70 Identities=19% Similarity=0.109 Sum_probs=57.6
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccH-HHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeE
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGAS-IPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIIT 253 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~-~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~ 253 (337)
++.+++-.+=..+=.+.-.|..+.|... +.+-.+.-+.-+.+.++++++.+.+..+++|..++++|++..
T Consensus 31 ~~~il~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~L 101 (106)
T COG2076 31 WPSILTIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGL 101 (106)
T ss_pred chHHHHHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHh
Confidence 4555565666666667777777887765 578889999999999999999999999999999999998754
No 70
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=67.72 E-value=25 Score=32.24 Aligned_cols=57 Identities=11% Similarity=0.174 Sum_probs=33.4
Q ss_pred CCCccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHH---HHHHhccccce
Q 019709 181 MPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILL---SIIFLGRRYRV 237 (337)
Q Consensus 181 ~pk~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIl---S~ifLk~RY~~ 237 (337)
.++|++++++.+=+..=+..+.....+|+...+-|..+......+. -..++||||+.
T Consensus 144 ~~~~k~~~~~~~~~~~w~~~~~~~~~lp~~inp~l~~~~~iiig~i~~~~~~~lkkk~~i 203 (206)
T PF06570_consen 144 PSWWKYILISVLAMVLWIVIFVLTSFLPPVINPVLPPWVYIIIGVIAFALRFYLKKKYNI 203 (206)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHccccCCcCCCHHHHHHHHHHHHHHHHHHHHHhCC
Confidence 4456766666555555455555555567766666665554433333 44578888875
No 71
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=67.43 E-value=26 Score=30.38 Aligned_cols=72 Identities=24% Similarity=0.370 Sum_probs=49.9
Q ss_pred hhhcCCCccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHH--------hccccceeeeehhhheee
Q 019709 177 EMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIF--------LGRRYRVNQLFGCFLVGI 248 (337)
Q Consensus 177 em~~~pk~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~if--------Lk~RY~~~qi~G~~IVl~ 248 (337)
+..+.|||.|+ -|++-+.--.......+.........+ .+-=+++.|.++ -|++.+..+++|+.++++
T Consensus 59 ~~~~~p~w~~l-GG~lG~~~V~~~~~~vp~lG~~~~~~l---~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~ 134 (138)
T PF04657_consen 59 SLSSVPWWAYL-GGLLGVFFVLSNIILVPRLGAALTTIL---IVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIA 134 (138)
T ss_pred hhccCChHHhc-cHHHHHHHHHHHHHHhhhhhHHHHHHH---HHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHH
Confidence 34567777766 888888888888888777766654432 223334444443 567899999999999999
Q ss_pred ceee
Q 019709 249 GVII 252 (337)
Q Consensus 249 Gviv 252 (337)
|+++
T Consensus 135 Gv~L 138 (138)
T PF04657_consen 135 GVIL 138 (138)
T ss_pred HHhC
Confidence 8753
No 72
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=66.62 E-value=28 Score=29.65 Aligned_cols=48 Identities=13% Similarity=0.153 Sum_probs=41.9
Q ss_pred ccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeec
Q 019709 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVAS 256 (337)
Q Consensus 209 gs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~s 256 (337)
|-...--.+..|..++++-+..=++|..++.+.|+.+|++|+.+.+..
T Consensus 58 GRvYAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~ 105 (109)
T COG1742 58 GRVYAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFG 105 (109)
T ss_pred hhHHHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeC
Confidence 445666778899999999999999999999999999999998877664
No 73
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=65.95 E-value=30 Score=34.63 Aligned_cols=69 Identities=16% Similarity=0.157 Sum_probs=51.5
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceee
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv 252 (337)
+-.++.+.|-+.|+.+.+.-...-..-.......+-=-+++++|.+.-+++.+..||+|+.+|..|+..
T Consensus 242 ~Di~l~s~~gavGQ~FI~~TI~~FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l 310 (327)
T KOG1581|consen 242 FDILLYSTCGAVGQLFIFYTIERFGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFL 310 (327)
T ss_pred HHHHHHHHhhhhhhheehhhHhhcccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHH
Confidence 346778899999999888776643333333333333357889999999999999999999999987654
No 74
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=65.71 E-value=4.4 Score=34.06 Aligned_cols=53 Identities=15% Similarity=0.158 Sum_probs=38.9
Q ss_pred HHHHHHHhHHHHHHHHHHHHHhHHHHHhhcCCCCeEEEeehhhHHHHHHHHhhh
Q 019709 272 SLLMIVSFLLQAADTVLKEVIFLDAAQRLKGGVDLFVVNSYGSAFQVSFVYMPS 325 (337)
Q Consensus 272 ~lL~llS~ip~AlSnV~kE~~F~~~~~~lk~~ldif~vn~w~s~fQ~l~~~lll 325 (337)
-++.++|.+++|+.+|+.|+.+++.. +-+.+.|.+.+..+.+...+++.....
T Consensus 2 ~~~~l~s~~~~al~~v~~~~~~~~~~-~~~~~~~~~~l~~~~~~~s~~~l~~~~ 54 (153)
T PF03151_consen 2 FILALASSLFSALRNVLIKKLLKKVS-SNSKKLNPLNLLYYNSPISFIILLPLA 54 (153)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhccc-ccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46789999999999999999987621 011248888888888888766544443
No 75
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=62.39 E-value=2.7 Score=40.80 Aligned_cols=74 Identities=16% Similarity=0.187 Sum_probs=63.1
Q ss_pred ccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecC
Q 019709 184 APFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASG 257 (337)
Q Consensus 184 ~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sg 257 (337)
|...++|.+.++|+.+.+.--.+-.+.--.+...+-=-||++.|.++...-.+..||+|..+|..|+.+.+.-|
T Consensus 242 ~~l~l~ai~s~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~G 315 (337)
T KOG1580|consen 242 WDLTLLAIASCLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDG 315 (337)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcC
Confidence 66788999999999999988877777655666666667999999999999999999999999999998876654
No 76
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=55.60 E-value=7.5 Score=38.61 Aligned_cols=69 Identities=16% Similarity=0.203 Sum_probs=53.3
Q ss_pred ccchHhhHHHHHH---HHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceee
Q 019709 184 APFVAVGLLEALA---AATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVII 252 (337)
Q Consensus 184 ~kf~i~GllDal~---~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv 252 (337)
+.+..+.+.++++ |...+....+||+...+++++.==.+.++.|+++++++.+..|.+|.++.++|+.+
T Consensus 233 ~~~~~~~~~sv~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~ 304 (316)
T KOG1441|consen 233 VTFLILLLNSVLAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFL 304 (316)
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHH
Confidence 3455566556444 55566666699999999999888777888888888888889999999888888754
No 77
>PF04973 NMN_transporter: Nicotinamide mononucleotide transporter; InterPro: IPR006419 The PnuC protein of Escherichia coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see IPR006417 from INTERPRO). The extreme N- and C-terminal regions are poorly conserved. ; GO: 0006810 transport, 0016020 membrane
Probab=55.17 E-value=63 Score=28.89 Aligned_cols=106 Identities=15% Similarity=0.128 Sum_probs=49.0
Q ss_pred hhhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHHHHhhhcc
Q 019709 127 LGVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAATGMAAGAI 206 (337)
Q Consensus 127 ~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal~~~L~viA~~y 206 (337)
+|..+.+++=...-..+.|.-...|+..+. .-+|+-..+.|.+.++-..+.++.+++.....-.+=+.+......-...
T Consensus 28 ~giis~~~y~~i~~~~~ly~~~~lq~~~~~-~~i~G~~~W~~~~~~~~~~~v~~~~~~~~~~~~~~~~i~~~~~~~~~~~ 106 (181)
T PF04973_consen 28 FGIISSLLYAYIFYQAGLYGDMLLQLFYFI-MSIYGWYQWKKGRDENDEVKVRRLSKKQWILLLIGILIGTAIFGFILKF 106 (181)
T ss_pred HHHHHHHHHHHHHHHhhhHHHHHHHHHHHH-HHHHHHHHHHhhhccCcccceeeCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666666556666666666654444 3344444333322111111122233332222222222222222222233
Q ss_pred ccccHHHHhcchhHHHHHHHHHHHhcc
Q 019709 207 LSGASIPILSQTFLVWQILLSIIFLGR 233 (337)
Q Consensus 207 tsgs~~~LL~q~~IP~tmIlS~ifLk~ 233 (337)
...+-.+.+|-.+...+++-.++.-||
T Consensus 107 ~~~~~~~~~Da~~~~~siva~~l~~~k 133 (181)
T PF04973_consen 107 LTDSPFPWLDALTTVLSIVAQWLMARK 133 (181)
T ss_pred hcCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 344555778877777776666665444
No 78
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=54.99 E-value=25 Score=34.13 Aligned_cols=156 Identities=13% Similarity=0.174 Sum_probs=92.9
Q ss_pred HHHHHHhhhhhHHHHHHHhCCC-CChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCCccchHhhHHHHHHHHH
Q 019709 121 AAVTVLLGVGNRVLYKLALVPL-KHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPKAPFVAVGLLEALAAAT 199 (337)
Q Consensus 121 ~i~~Vi~G~~N~Vl~Kl~~~~~-~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk~kf~i~GllDal~~~L 199 (337)
++.+......-++.-|....-. .|-.|.+-..++..+++-..+.-..|.-. ..+ ..-++.+.+.++-+.--+-
T Consensus 11 ~lsYc~sSIlmTltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l~~~~-----fR~-t~aK~WfpiSfLLv~MIyt 84 (309)
T COG5070 11 SLSYCFSSILMTLTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFLRLVE-----FRL-TKAKKWFPISFLLVVMIYT 84 (309)
T ss_pred HHHHHHHHHHHHHhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHHhHhh-----eeh-hhhhhhcCHHHHHHHHHHh
Confidence 3444444555556666666543 35555555566666554332211112100 001 1112345577777777788
Q ss_pred HHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEeecCCCCC---CCCCCcchHHHHHHH
Q 019709 200 GMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVASGSNPG---HSLKGAGIFWSLLMI 276 (337)
Q Consensus 200 ~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~sgs~~g---~s~~~~~vlw~lL~l 276 (337)
.-.+++|++.++..+.-..+|...+..=..|.|.|.+-.+...-.+.++.-++.-.+|-.+. +..-..+.+|+..-+
T Consensus 85 ~SKsLqyL~vpiYTiFKNltII~iAygEvl~Fgg~vtsl~l~SFilMvlSS~va~w~D~q~~~~~~~~lN~GY~Wm~~Nc 164 (309)
T COG5070 85 SSKSLQYLAVPIYTIFKNLTIILIAYGEVLFFGGRVTSLELLSFILMVLSSVVATWGDQQASAFKAQILNPGYLWMFTNC 164 (309)
T ss_pred cccceeeeeeeHHHHhccceeehhHhhHHHHhcCccchhhHHHHHHHHHHHHHhccchhhHHHHHhcccCCceEEEehhh
Confidence 88999999999999999999999999999999999988877776555543333222211000 011245577877666
Q ss_pred HHhHHH
Q 019709 277 VSFLLQ 282 (337)
Q Consensus 277 lS~ip~ 282 (337)
++...+
T Consensus 165 lssaaf 170 (309)
T COG5070 165 LSSAAF 170 (309)
T ss_pred HhHHHH
Confidence 665443
No 79
>PRK13499 rhamnose-proton symporter; Provisional
Probab=54.52 E-value=17 Score=36.58 Aligned_cols=100 Identities=19% Similarity=0.056 Sum_probs=74.4
Q ss_pred hHhhHHHHHHHHHHHhhhccccccHH-HHhcchhHHHHHHHHHHHhcc-------ccceeeeehhhheeeceeeEeecCC
Q 019709 187 VAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGR-------RYRVNQLFGCFLVGIGVIITVASGS 258 (337)
Q Consensus 187 ~i~GllDal~~~L~viA~~ytsgs~~-~LL~q~~IP~tmIlS~ifLk~-------RY~~~qi~G~~IVl~Gviv~v~sgs 258 (337)
++-|++=..+|++.+.+..|...+.. ++=.+..+....++-.+++++ +=...=++|++++++|++++...+.
T Consensus 77 ~l~G~~W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~ 156 (345)
T PRK13499 77 FLFGALWGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQ 156 (345)
T ss_pred HHHHHHHHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhh
Confidence 34678899999999999999998885 455566778888887777663 1112346789999999999888543
Q ss_pred CCCC------CCCCcchHHHHHHHHHhHHHHHHH
Q 019709 259 NPGH------SLKGAGIFWSLLMIVSFLLQAADT 286 (337)
Q Consensus 259 ~~g~------s~~~~~vlw~lL~llS~ip~AlSn 286 (337)
..++ ..+.+.-.+.++.++|.+.++.-+
T Consensus 157 ~k~~~~~~~~~~~~~~~KGi~ialisgi~~~~f~ 190 (345)
T PRK13499 157 LKERKMGIKKAEEFNLKKGLILAVMSGIFSACFS 190 (345)
T ss_pred hcccccccccccccchHhHHHHHHHHHHHHHHHH
Confidence 2221 234567888999999999999888
No 80
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=51.24 E-value=33 Score=34.18 Aligned_cols=118 Identities=14% Similarity=0.115 Sum_probs=82.6
Q ss_pred hhhhHHHHHHHhCCCCChhHHHHHHhhhhHHHHHHHHHHHHHhcCccchhhhcCCC---ccchHhhHHHHHHHHHHHhhh
Q 019709 128 GVGNRVLYKLALVPLKHYPFFLAQLATFGYVAVYFSILYLRYHAGIVTDEMLSMPK---APFVAVGLLEALAAATGMAAG 204 (337)
Q Consensus 128 G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t~~y~~vyf~il~~r~~~~~it~em~~~pk---~kf~i~GllDal~~~L~viA~ 204 (337)
-..|.|..|....|..+--|-++..+|.-.++.|.+.+....-. ++...+|+ ++|.++=.+..+-++.+.++-
T Consensus 197 vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~----~~v~~~~~l~a~~Fw~~mtLsglfgF~mgyvT 272 (347)
T KOG1442|consen 197 VALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEF----QAVVGFPHLPAIKFWILMTLSGLFGFAMGYVT 272 (347)
T ss_pred HHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchH----HHHcCcccchHHHHHHHHHHHHHHHHHhhhee
Confidence 34799999999889999999999999988888888776664322 12334443 677776666666665554443
Q ss_pred c----cccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeec
Q 019709 205 A----ILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIG 249 (337)
Q Consensus 205 ~----ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~G 249 (337)
. .||+.--++=..+---.+-++...+++.--+...|.|.++|++|
T Consensus 273 g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvg 321 (347)
T KOG1442|consen 273 GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVG 321 (347)
T ss_pred eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEeh
Confidence 2 55555445545555666778888899888788888888777775
No 81
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=49.13 E-value=15 Score=31.55 Aligned_cols=72 Identities=13% Similarity=0.092 Sum_probs=54.7
Q ss_pred CccchHhhHHHHHHHHHHHhhhccccccHH-HHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEe
Q 019709 183 KAPFVAVGLLEALAAATGMAAGAILSGASI-PILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (337)
Q Consensus 183 k~kf~i~GllDal~~~L~viA~~ytsgs~~-~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v 254 (337)
.|.|.++=+++-++..+-+.-++++|.++. ++-+-..+.+|.+.-+..=.+--...-++|..+++.|+.+++
T Consensus 52 ~w~Y~iPFllNqcgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 52 NWEYLIPFLLNQCGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hHHHHHHHHHHHhhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 478999999999999999999999999985 566667788888777654333445566777777777765543
No 82
>PRK02237 hypothetical protein; Provisional
Probab=47.38 E-value=6.8 Score=33.33 Aligned_cols=47 Identities=13% Similarity=0.179 Sum_probs=41.4
Q ss_pred ccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEee
Q 019709 209 GASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (337)
Q Consensus 209 gs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~ 255 (337)
|=...-=.+..|..++++-+.+=+.|++.+.++|+.+|++|+.+...
T Consensus 59 GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~ 105 (109)
T PRK02237 59 GRVYAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMY 105 (109)
T ss_pred hhHHHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHhee
Confidence 55666778889999999999999999999999999999999876644
No 83
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=45.92 E-value=33 Score=33.47 Aligned_cols=107 Identities=18% Similarity=0.128 Sum_probs=79.2
Q ss_pred cchHhhHHHHHHHHHHHhhhccccccHHHHh-cchhHHHHHHHHHHHhccccceeeee----hhhheeeceeeEeecCCC
Q 019709 185 PFVAVGLLEALAAATGMAAGAILSGASIPIL-SQTFLVWQILLSIIFLGRRYRVNQLF----GCFLVGIGVIITVASGSN 259 (337)
Q Consensus 185 kf~i~GllDal~~~L~viA~~ytsgs~~~LL-~q~~IP~tmIlS~ifLk~RY~~~qi~----G~~IVl~Gviv~v~sgs~ 259 (337)
.-++-|++=++++..++.+..+...+...-+ .+.-++.+.++..++++.--+..+++ +.+++++|+.+....+.+
T Consensus 47 ~~~lsG~~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~ 126 (269)
T PF06800_consen 47 VAFLSGAFWAIGQIGQFKSFKKIGVSKTMPISTGLQLVGTSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKK 126 (269)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcceeeeccchhHHHHHHHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhcccccc
Confidence 3455788999999999999998888876444 46678899999999999966666654 667888888887777544
Q ss_pred CCC-CCCCcchHHHHHHHHHhHHHHHHHHHHHH
Q 019709 260 PGH-SLKGAGIFWSLLMIVSFLLQAADTVLKEV 291 (337)
Q Consensus 260 ~g~-s~~~~~vlw~lL~llS~ip~AlSnV~kE~ 291 (337)
+++ +...+...+.+..++|++-+-+=.+.-..
T Consensus 127 ~~~~~~~~~~~kgi~~Ll~stigy~~Y~~~~~~ 159 (269)
T PF06800_consen 127 SDKSSSKSNMKKGILALLISTIGYWIYSVIPKA 159 (269)
T ss_pred ccccccccchhhHHHHHHHHHHHHHHHHHHHHh
Confidence 432 23455667778888888887776666443
No 84
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=44.43 E-value=86 Score=31.79 Aligned_cols=139 Identities=14% Similarity=0.081 Sum_probs=89.0
Q ss_pred ccchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHHHhh-hhHHHHHHHHHHHHHhcCccchhhhcCCCc--cchH
Q 019709 112 DRRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQLAT-FGYVAVYFSILYLRYHAGIVTDEMLSMPKA--PFVA 188 (337)
Q Consensus 112 ~~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q~~t-~~y~~vyf~il~~r~~~~~it~em~~~pk~--kf~i 188 (337)
+.-+-+...+...++.|-+..-+-|+.-. -..--|-.|-... ++-+.-+..++.. ....+. +.--+.+| .-++
T Consensus 180 n~~~G~~avl~~c~~SgfAgvYfEkiLK~-s~~s~wi~NiqL~~~g~~f~~l~~~~~--d~~~i~-~~gff~G~s~~vw~ 255 (345)
T KOG2234|consen 180 NPFLGLVAVLVACFLSGFAGVYFEKILKG-SNVSLWIRNIQLYFFGILFNLLTILLQ--DGEAIN-EYGFFYGYSSIVWL 255 (345)
T ss_pred chhhhHHHHHHHHHHHHHHHHHHHHHHhc-CCchHHHHHHHHHHHHHHHHHHHHhhc--cccccc-cCCccccccHHHHH
Confidence 44455566677777888888888887733 2233344443222 2222222222222 111122 11112222 2344
Q ss_pred hhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeeceeeEe
Q 019709 189 VGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVIITV 254 (337)
Q Consensus 189 ~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v 254 (337)
+=+..+.+++++-+=..|.+.-+=..-....|.++.+.|+.+.+.+.+..=.+|+.+|+..+.+-.
T Consensus 256 vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~ 321 (345)
T KOG2234|consen 256 VVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYS 321 (345)
T ss_pred HHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhh
Confidence 567789999998888888887777777778999999999999999999999999999988877765
No 85
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=37.37 E-value=18 Score=35.80 Aligned_cols=66 Identities=17% Similarity=0.271 Sum_probs=56.8
Q ss_pred CccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheee
Q 019709 183 KAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGI 248 (337)
Q Consensus 183 k~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~ 248 (337)
+|.|..+|..-..++++...|.+.--.-=..++.++-+++..++=.+|.+.-.+.|.|+|+++++.
T Consensus 253 r~l~~~lGvfgfigQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvs 318 (346)
T KOG4510|consen 253 RWLFVNLGVFGFIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVS 318 (346)
T ss_pred eEEEEEehhhhhHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeeh
Confidence 356777999999999999999996555555678888999999999999999999999999977665
No 86
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=37.09 E-value=28 Score=34.38 Aligned_cols=78 Identities=21% Similarity=0.086 Sum_probs=54.4
Q ss_pred hhcCCCc-cchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHHHH-HHHHHHHhccccceeeeehhhheeeceeeEee
Q 019709 178 MLSMPKA-PFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLVWQ-ILLSIIFLGRRYRVNQLFGCFLVGIGVIITVA 255 (337)
Q Consensus 178 m~~~pk~-kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP~t-mIlS~ifLk~RY~~~qi~G~~IVl~Gviv~v~ 255 (337)
.++.|+. -.++.+.++...|-..++=+....-.+-.=|.=.+-|.. +++-.+|||.|.++.|++.+.+..+||.+...
T Consensus 65 ~~~~p~~~~~~~l~a~li~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~ 144 (293)
T COG2962 65 LLKQPKTLLMLALTALLIGLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTW 144 (293)
T ss_pred HHhCcHHHHHHHHHHHHHHHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHH
Confidence 3445543 345577777777777766544443444455555666654 55678899999999999999999999887654
No 87
>PRK13499 rhamnose-proton symporter; Provisional
Probab=32.92 E-value=2.1e+02 Score=28.86 Aligned_cols=66 Identities=14% Similarity=0.120 Sum_probs=46.3
Q ss_pred hHhhHHHHHHHHHHHhhhccccc----cHHHHhcchhHHHHHHHHHHHhccccc------eeeeehhhheeeceeeE
Q 019709 187 VAVGLLEALAAATGMAAGAILSG----ASIPILSQTFLVWQILLSIIFLGRRYR------VNQLFGCFLVGIGVIIT 253 (337)
Q Consensus 187 ~i~GllDal~~~L~viA~~ytsg----s~~~LL~q~~IP~tmIlS~ifLk~RY~------~~qi~G~~IVl~Gviv~ 253 (337)
++.|++-..++.+..+|....+. .++.+.+|..+.+..++..+ ||++=+ ..-++|+.++++|.++.
T Consensus 264 ~l~G~~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~a~~k~~~~l~~G~vliI~g~~li 339 (345)
T PRK13499 264 ALAGVMWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKGASRRPVRVLSLGCVVIILAANIV 339 (345)
T ss_pred HHHHHHHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccCCCccchhHHHHHHHHHHHHHHHH
Confidence 66788899999998888875533 36778889999999999984 776433 33345555555554443
No 88
>COG4858 Uncharacterized membrane-bound protein conserved in bacteria [Function unknown]
Probab=32.17 E-value=3.9e+02 Score=25.32 Aligned_cols=63 Identities=19% Similarity=0.163 Sum_probs=45.6
Q ss_pred hhhcCCCccchHhhHHHHHHHHHHHhhhccccccHHHHhcchhHH---HHHHHHHHHhccccceee
Q 019709 177 EMLSMPKAPFVAVGLLEALAAATGMAAGAILSGASIPILSQTFLV---WQILLSIIFLGRRYRVNQ 239 (337)
Q Consensus 177 em~~~pk~kf~i~GllDal~~~L~viA~~ytsgs~~~LL~q~~IP---~tmIlS~ifLk~RY~~~q 239 (337)
...+-++||+++...+-++-=.+++++...+|.++.+-|.-.... -..+--.+.||||++...
T Consensus 155 ~sqr~~~~K~~lv~~~sm~lWi~v~i~t~~lPtslN~~L~pi~l~IiGav~lalRfylkkk~NIqs 220 (226)
T COG4858 155 NSQRPGTWKYLLVAVLSMLLWIAVMIATVFLPTSLNPQLPPIALTIIGAVILALRFYLKKKKNIQS 220 (226)
T ss_pred cccCCchHHHHHHHHHHHHHHHHHHHHHhhCCCcCCcCCchHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 345556799999998888888999999999999988776654332 223334456888887643
No 89
>PF02554 CstA: Carbon starvation protein CstA; InterPro: IPR003706 Escherichia coli induces the synthesis of at least 30 proteins at the onset of carbon starvation, two-thirds of which are positively regulated by the cyclic AMP (cAMP) and cAMP receptor protein (CRP) complex. This family consists of carbon starvation protein CstA a predicted membrane protein. It has been suggested that CstA is involved in peptide utilization [].; GO: 0009267 cellular response to starvation, 0016020 membrane
Probab=27.59 E-value=4e+02 Score=27.43 Aligned_cols=50 Identities=24% Similarity=0.283 Sum_probs=27.9
Q ss_pred HHHHhccccceee---eehhhheeeceeeEeec----CCCC----CCCCCCcchHHHHHHH
Q 019709 227 SIIFLGRRYRVNQ---LFGCFLVGIGVIITVAS----GSNP----GHSLKGAGIFWSLLMI 276 (337)
Q Consensus 227 S~ifLk~RY~~~q---i~G~~IVl~Gviv~v~s----gs~~----g~s~~~~~vlw~lL~l 276 (337)
-+.+|.+||..+- +.+++...+|+++.... ...+ +........+|++|++
T Consensus 233 Vw~Llqprdyl~~~~L~~~~~~~~igli~~~~~i~~p~~~~~~~~~~~p~~~~pl~P~LFI 293 (376)
T PF02554_consen 233 VWKLLQPRDYLNGFLLIGMLIGLVIGLIIGGPTIQMPAFTSFAVNGNGPAGGGPLFPFLFI 293 (376)
T ss_pred HHHHhCchHHHHHHHHHHHHHHHHHheeecCCCcCcchhhhhhhhccCCCcCCCCHHHHHH
Confidence 3558999987654 45556666666664321 1111 1112256788987764
No 90
>TIGR01528 NMN_trans_PnuC nicotinamide mononucleotide transporter PnuC. The PnuC protein of E. coli is membrane protein responsible for nicotinamide mononucleotide transport, subject to regulation by interaction with the NadR (also called NadI) protein (see TIGR01526). This model defines a region corresponding to most of the length of PnuC, found primarily in pathogens. The extreme N- and C-terminal regions are poorly conserved and not included in the alignment and model.
Probab=27.43 E-value=77 Score=28.86 Aligned_cols=24 Identities=25% Similarity=0.405 Sum_probs=18.2
Q ss_pred HHHHhcchhHHHHHHHHHHHhccc
Q 019709 211 SIPILSQTFLVWQILLSIIFLGRR 234 (337)
Q Consensus 211 ~~~LL~q~~IP~tmIlS~ifLk~R 234 (337)
..+.+|-.+...+++-.++.-||+
T Consensus 114 ~~p~~Da~~t~~Siva~~l~~~k~ 137 (189)
T TIGR01528 114 NFPWLDSITFVIGIVAQILMVRRY 137 (189)
T ss_pred CchHHHHHHHHHHHHHHHHHHHHH
Confidence 458888888888888877766653
No 91
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=24.17 E-value=43 Score=32.92 Aligned_cols=54 Identities=20% Similarity=0.110 Sum_probs=46.6
Q ss_pred HHHHhhhccccccHHHHhcchhHHHHHHHHHHHhccccceeeeehhhheeecee
Q 019709 198 ATGMAAGAILSGASIPILSQTFLVWQILLSIIFLGRRYRVNQLFGCFLVGIGVI 251 (337)
Q Consensus 198 ~L~viA~~ytsgs~~~LL~q~~IP~tmIlS~ifLk~RY~~~qi~G~~IVl~Gvi 251 (337)
.+-++|..+.|...+..|...--.+-.+.-++||+.+.+..||+|...|+.+..
T Consensus 225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsa 278 (292)
T COG5006 225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASA 278 (292)
T ss_pred HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHh
Confidence 467889999999999999887777778888999999999999999988776543
No 92
>COG1966 CstA Carbon starvation protein, predicted membrane protein [Signal transduction mechanisms]
Probab=20.22 E-value=3.8e+02 Score=29.04 Aligned_cols=39 Identities=15% Similarity=0.148 Sum_probs=20.9
Q ss_pred cchHHHHHHHHHHHhhhhhHHHHHHHhCCCCChhHHHHH
Q 019709 113 RRVEIVIAAAVTVLLGVGNRVLYKLALVPLKHYPFFLAQ 151 (337)
Q Consensus 113 ~~~~v~i~~i~~Vi~G~~N~Vl~Kl~~~~~~nYp~Fl~q 151 (337)
+..+....+..++++=..+.|+.-...+-+.|.||=...
T Consensus 126 ~~a~~~~~~~~l~iliiv~Avfa~vv~~~l~~~p~~~f~ 164 (575)
T COG1966 126 RTAKVFFLLLALILLILVGAVFAAVIAKLLANSPWGVFT 164 (575)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCChhHHH
Confidence 444444544444444455555555555555677765443
Done!