Query 019712
Match_columns 337
No_of_seqs 170 out of 1971
Neff 9.3
Searched_HMMs 46136
Date Fri Mar 29 03:56:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019712.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/019712hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00411 nodulin MtN21 family 100.0 1.4E-37 3.1E-42 285.4 29.3 305 1-315 18-335 (358)
2 PRK11272 putative DMT superfam 100.0 2.5E-32 5.5E-37 246.4 28.3 274 2-312 14-289 (292)
3 PRK11453 O-acetylserine/cystei 100.0 3.1E-32 6.8E-37 246.6 28.1 275 2-311 10-290 (299)
4 PRK11689 aromatic amino acid e 100.0 1.1E-31 2.4E-36 242.5 25.9 277 2-311 10-290 (295)
5 PRK10532 threonine and homoser 100.0 6.2E-31 1.3E-35 237.4 27.7 274 1-317 17-290 (293)
6 TIGR00950 2A78 Carboxylate/Ami 100.0 6.9E-31 1.5E-35 233.4 26.1 258 8-303 1-259 (260)
7 TIGR00817 tpt Tpt phosphate/ph 100.0 4E-30 8.7E-35 233.3 25.7 273 11-314 17-299 (302)
8 PRK15430 putative chlorampheni 100.0 2.3E-30 5.1E-35 234.0 22.3 269 2-310 14-287 (296)
9 TIGR03340 phn_DUF6 phosphonate 100.0 2.6E-27 5.6E-32 212.6 25.3 270 2-305 7-280 (281)
10 PF06027 DUF914: Eukaryotic pr 100.0 1.7E-26 3.7E-31 207.9 29.2 289 5-317 22-314 (334)
11 PTZ00343 triose or hexose phos 100.0 9.7E-27 2.1E-31 214.5 26.6 268 10-309 63-349 (350)
12 TIGR00688 rarD rarD protein. T 99.9 9.9E-25 2.1E-29 193.4 22.3 242 1-283 7-255 (256)
13 COG0697 RhaT Permeases of the 99.9 3.9E-23 8.6E-28 186.0 27.9 273 2-309 13-288 (292)
14 COG5006 rhtA Threonine/homoser 99.9 1.6E-22 3.5E-27 169.2 22.0 260 12-314 28-288 (292)
15 KOG4510 Permease of the drug/m 99.9 2.3E-24 5E-29 181.4 5.5 284 6-313 47-330 (346)
16 TIGR00776 RhaT RhaT L-rhamnose 99.9 6.1E-21 1.3E-25 171.6 24.4 268 2-309 7-289 (290)
17 PF08449 UAA: UAA transporter 99.9 2.4E-20 5.2E-25 169.2 26.1 265 25-313 32-302 (303)
18 COG2962 RarD Predicted permeas 99.9 1.6E-20 3.4E-25 161.6 23.2 273 2-313 13-288 (293)
19 KOG2765 Predicted membrane pro 99.8 1E-19 2.2E-24 160.6 18.8 235 60-314 158-396 (416)
20 KOG1441 Glucose-6-phosphate/ph 99.8 2.5E-19 5.4E-24 159.6 14.7 272 14-316 35-315 (316)
21 KOG1580 UDP-galactose transpor 99.7 6.2E-16 1.3E-20 128.4 18.8 262 25-313 53-318 (337)
22 KOG1581 UDP-galactose transpor 99.7 1.4E-15 2.9E-20 131.3 19.3 266 24-314 50-319 (327)
23 KOG2234 Predicted UDP-galactos 99.7 1.2E-13 2.6E-18 122.5 27.4 293 3-313 22-327 (345)
24 KOG1444 Nucleotide-sugar trans 99.7 6.3E-14 1.4E-18 122.6 23.8 285 3-318 15-310 (314)
25 COG2510 Predicted membrane pro 99.7 1.2E-15 2.6E-20 115.0 11.1 128 2-139 9-138 (140)
26 PF04142 Nuc_sug_transp: Nucle 99.7 1.8E-14 3.9E-19 125.7 19.8 229 57-298 13-243 (244)
27 KOG1443 Predicted integral mem 99.6 2.1E-13 4.6E-18 117.8 21.1 254 25-307 45-314 (349)
28 KOG2766 Predicted membrane pro 99.6 1.7E-15 3.6E-20 127.3 7.0 268 9-311 32-302 (336)
29 COG2510 Predicted membrane pro 99.6 6.4E-14 1.4E-18 105.6 13.5 136 170-308 4-139 (140)
30 KOG1583 UDP-N-acetylglucosamin 99.6 1E-13 2.2E-18 118.1 16.0 265 26-309 34-315 (330)
31 PF00892 EamA: EamA-like trans 99.5 2E-14 4.3E-19 112.7 8.3 123 6-138 1-124 (126)
32 PF00892 EamA: EamA-like trans 99.5 2.3E-13 5E-18 106.6 9.1 125 179-307 1-125 (126)
33 KOG3912 Predicted integral mem 99.5 1.5E-12 3.2E-17 111.2 13.9 272 10-307 17-333 (372)
34 COG5070 VRG4 Nucleotide-sugar 99.4 1.2E-12 2.5E-17 108.2 10.0 277 13-316 23-304 (309)
35 KOG1442 GDP-fucose transporter 99.4 2E-12 4.3E-17 110.1 8.4 283 13-321 45-340 (347)
36 PF06800 Sugar_transport: Suga 99.3 9.7E-10 2.1E-14 95.9 23.0 248 23-305 10-268 (269)
37 KOG1582 UDP-galactose transpor 99.3 1.2E-11 2.7E-16 105.1 9.8 261 22-313 70-337 (367)
38 PF13536 EmrE: Multidrug resis 99.3 5.1E-12 1.1E-16 97.5 6.1 104 30-140 2-106 (113)
39 PF03151 TPT: Triose-phosphate 99.2 1.4E-10 3E-15 94.4 12.0 138 170-308 1-153 (153)
40 TIGR00950 2A78 Carboxylate/Ami 99.2 4E-10 8.7E-15 99.9 13.9 124 2-136 134-260 (260)
41 PRK15430 putative chlorampheni 99.2 4.9E-10 1.1E-14 101.4 13.8 139 166-308 5-145 (296)
42 TIGR00688 rarD rarD protein. T 99.1 1.2E-09 2.7E-14 96.7 13.1 137 169-308 2-142 (256)
43 TIGR03340 phn_DUF6 phosphonate 99.1 2.5E-09 5.4E-14 96.1 15.2 133 171-308 3-135 (281)
44 KOG4314 Predicted carbohydrate 99.1 7.4E-10 1.6E-14 90.2 10.3 214 68-309 60-277 (290)
45 PRK13499 rhamnose-proton sympo 99.0 3.3E-07 7.1E-12 83.3 23.8 292 2-309 13-342 (345)
46 PRK11272 putative DMT superfam 99.0 8.7E-09 1.9E-13 93.1 13.0 128 2-139 156-284 (292)
47 PRK10532 threonine and homoser 99.0 9.9E-09 2.1E-13 92.8 13.4 127 2-140 154-281 (293)
48 PRK02971 4-amino-4-deoxy-L-ara 99.0 1.6E-08 3.4E-13 79.2 12.2 122 169-311 2-125 (129)
49 TIGR00803 nst UDP-galactose tr 98.9 1.5E-08 3.2E-13 87.8 12.0 209 87-305 3-221 (222)
50 PLN00411 nodulin MtN21 family 98.9 3.7E-08 8E-13 91.0 13.7 142 167-310 11-158 (358)
51 PRK11689 aromatic amino acid e 98.9 2.1E-08 4.6E-13 90.7 11.9 124 2-139 162-286 (295)
52 PF05653 Mg_trans_NIPA: Magnes 98.8 7E-08 1.5E-12 86.9 13.4 227 63-311 51-295 (300)
53 PF13536 EmrE: Multidrug resis 98.8 2.2E-08 4.7E-13 77.1 8.7 108 204-312 3-110 (113)
54 PRK11453 O-acetylserine/cystei 98.7 2.8E-07 6.1E-12 83.5 13.9 126 171-308 6-132 (299)
55 TIGR00817 tpt Tpt phosphate/ph 98.7 3.6E-07 7.8E-12 83.0 13.9 126 178-307 11-136 (302)
56 PTZ00343 triose or hexose phos 98.7 6.1E-07 1.3E-11 83.1 15.0 139 167-307 47-185 (350)
57 COG4975 GlcU Putative glucose 98.7 9.4E-09 2E-13 86.7 2.6 268 2-308 8-285 (288)
58 PRK15051 4-amino-4-deoxy-L-ara 98.6 3.2E-07 6.9E-12 70.1 9.2 68 65-138 40-107 (111)
59 COG2962 RarD Predicted permeas 98.6 6.2E-07 1.3E-11 78.1 11.8 141 168-311 6-147 (293)
60 KOG2922 Uncharacterized conser 98.5 5.7E-07 1.2E-11 79.2 9.9 229 63-314 65-312 (335)
61 PF03151 TPT: Triose-phosphate 98.5 2.9E-06 6.2E-11 68.8 12.9 127 2-137 6-150 (153)
62 PRK15051 4-amino-4-deoxy-L-ara 98.5 1.1E-06 2.5E-11 67.1 8.9 67 242-308 43-109 (111)
63 COG0697 RhaT Permeases of the 98.3 1.4E-05 2.9E-10 71.7 14.4 143 167-313 5-148 (292)
64 TIGR00776 RhaT RhaT L-rhamnose 98.2 1.4E-05 3.1E-10 72.0 11.4 122 2-139 158-287 (290)
65 PF06027 DUF914: Eukaryotic pr 98.2 3.6E-05 7.8E-10 70.1 13.7 133 1-143 173-308 (334)
66 PF08449 UAA: UAA transporter 98.1 7E-05 1.5E-09 68.0 13.1 132 180-317 11-145 (303)
67 PRK02971 4-amino-4-deoxy-L-ara 98.1 1.3E-05 2.8E-10 62.8 7.0 70 64-139 50-121 (129)
68 KOG4510 Permease of the drug/m 98.0 2.2E-06 4.7E-11 73.5 1.6 137 166-310 35-171 (346)
69 PRK10452 multidrug efflux syst 98.0 3E-05 6.5E-10 59.7 7.6 68 243-310 37-105 (120)
70 COG5006 rhtA Threonine/homoser 98.0 7.2E-05 1.6E-09 63.9 10.3 127 2-138 154-280 (292)
71 PF05653 Mg_trans_NIPA: Magnes 97.9 2.4E-05 5.1E-10 70.6 7.0 121 166-311 4-125 (300)
72 PRK09541 emrE multidrug efflux 97.8 0.00011 2.4E-09 55.8 7.5 68 243-310 37-105 (110)
73 PF06800 Sugar_transport: Suga 97.7 0.00097 2.1E-08 58.6 12.5 114 197-315 11-129 (269)
74 PF04657 DUF606: Protein of un 97.6 0.0012 2.6E-08 52.5 11.6 132 170-305 2-138 (138)
75 PF10639 UPF0546: Uncharacteri 97.6 0.00044 9.5E-09 52.4 8.5 111 1-138 1-112 (113)
76 PRK10650 multidrug efflux syst 97.6 0.00089 1.9E-08 50.6 9.3 64 69-138 42-106 (109)
77 PRK10452 multidrug efflux syst 97.5 0.00025 5.5E-09 54.6 6.3 67 67-139 35-102 (120)
78 COG2076 EmrE Membrane transpor 97.5 0.00043 9.3E-09 51.6 6.6 66 245-310 39-105 (106)
79 PRK10650 multidrug efflux syst 97.5 0.0016 3.5E-08 49.3 9.8 63 245-307 44-107 (109)
80 COG2076 EmrE Membrane transpor 97.5 0.00029 6.4E-09 52.4 5.7 65 68-138 36-101 (106)
81 PRK09541 emrE multidrug efflux 97.5 0.00039 8.5E-09 52.8 6.3 67 67-139 35-102 (110)
82 PRK13499 rhamnose-proton sympo 97.4 0.0014 3E-08 60.0 10.6 143 166-314 4-159 (345)
83 PRK11431 multidrug efflux syst 97.4 0.00068 1.5E-08 51.0 7.2 65 244-308 37-102 (105)
84 COG3238 Uncharacterized protei 97.4 0.0039 8.4E-08 49.7 11.2 139 168-309 4-147 (150)
85 PRK11431 multidrug efflux syst 97.4 0.00082 1.8E-08 50.5 6.9 64 69-138 36-100 (105)
86 PF06379 RhaT: L-rhamnose-prot 97.2 0.15 3.3E-06 46.2 21.5 291 3-308 14-340 (344)
87 PF04142 Nuc_sug_transp: Nucle 97.2 0.00088 1.9E-08 58.7 6.5 67 247-313 28-94 (244)
88 PF04657 DUF606: Protein of un 97.0 0.007 1.5E-07 48.1 9.6 119 8-137 13-138 (138)
89 PF00893 Multi_Drug_Res: Small 97.0 0.0038 8.3E-08 46.0 7.4 55 245-299 38-93 (93)
90 PF00893 Multi_Drug_Res: Small 96.9 0.0025 5.5E-08 46.9 5.7 57 68-130 35-92 (93)
91 COG4975 GlcU Putative glucose 96.7 0.0013 2.7E-08 56.2 2.9 132 170-311 3-139 (288)
92 KOG1441 Glucose-6-phosphate/ph 96.6 0.0015 3.2E-08 59.0 2.6 110 181-293 29-140 (316)
93 KOG2234 Predicted UDP-galactos 96.5 0.25 5.5E-06 44.8 16.1 144 169-313 15-169 (345)
94 PF10639 UPF0546: Uncharacteri 96.3 0.013 2.9E-07 44.4 5.9 109 176-306 3-112 (113)
95 PF07857 DUF1632: CEO family ( 96.1 0.099 2.2E-06 45.8 11.5 181 2-195 6-209 (254)
96 PF07857 DUF1632: CEO family ( 95.8 0.02 4.3E-07 50.1 5.6 132 170-313 1-139 (254)
97 KOG2922 Uncharacterized conser 95.8 0.00094 2E-08 59.3 -2.7 127 164-314 16-142 (335)
98 KOG1444 Nucleotide-sugar trans 95.6 0.23 5E-06 44.5 11.6 134 170-307 13-148 (314)
99 KOG2765 Predicted membrane pro 95.5 0.099 2.2E-06 47.7 9.0 133 2-140 253-390 (416)
100 PF06379 RhaT: L-rhamnose-prot 95.2 0.15 3.3E-06 46.2 9.1 148 166-316 4-161 (344)
101 TIGR00803 nst UDP-galactose tr 95.0 0.065 1.4E-06 46.2 6.2 65 66-137 157-221 (222)
102 KOG1580 UDP-galactose transpor 94.9 0.069 1.5E-06 45.5 5.9 73 59-138 239-311 (337)
103 KOG1581 UDP-galactose transpor 93.9 1.1 2.4E-05 39.9 11.2 140 168-313 13-160 (327)
104 COG3238 Uncharacterized protei 93.4 0.79 1.7E-05 36.7 8.7 106 24-138 33-144 (150)
105 KOG4314 Predicted carbohydrate 92.5 0.035 7.6E-07 46.0 -0.0 65 248-312 65-129 (290)
106 COG5070 VRG4 Nucleotide-sugar 89.5 4 8.7E-05 34.9 9.3 109 21-138 181-294 (309)
107 KOG4831 Unnamed protein [Funct 89.4 2.9 6.3E-05 31.0 7.3 109 1-138 8-123 (125)
108 KOG1443 Predicted integral mem 88.2 3.6 7.7E-05 36.9 8.5 121 189-310 36-158 (349)
109 PRK02237 hypothetical protein; 88.1 2.1 4.6E-05 31.9 6.0 47 265-311 62-108 (109)
110 KOG3912 Predicted integral mem 87.9 0.62 1.3E-05 41.0 3.6 66 245-310 95-160 (372)
111 KOG1442 GDP-fucose transporter 84.9 1.3 2.8E-05 39.0 4.0 111 197-308 60-174 (347)
112 PF02694 UPF0060: Uncharacteri 83.8 1.3 2.9E-05 32.9 3.2 46 266-311 61-106 (107)
113 KOG1583 UDP-N-acetylglucosamin 82.6 2.5 5.4E-05 37.3 4.8 69 248-316 76-145 (330)
114 PF07168 Ureide_permease: Urei 82.5 1.4 3.1E-05 39.3 3.3 131 175-308 2-146 (336)
115 PF05977 MFS_3: Transmembrane 82.0 52 0.0011 32.4 14.4 38 269-306 353-390 (524)
116 PRK06638 NADH:ubiquinone oxido 80.5 34 0.00074 28.9 12.2 50 167-219 28-77 (198)
117 PF08507 COPI_assoc: COPI asso 73.5 7.7 0.00017 30.6 4.9 16 292-307 89-104 (136)
118 KOG2766 Predicted membrane pro 72.7 26 0.00055 30.8 8.0 126 2-139 172-298 (336)
119 PF04342 DUF486: Protein of un 71.3 4.6 9.9E-05 30.1 2.8 30 277-306 77-106 (108)
120 KOG1582 UDP-galactose transpor 70.8 10 0.00022 33.5 5.2 111 22-142 217-334 (367)
121 KOG4831 Unnamed protein [Funct 70.7 11 0.00023 28.2 4.5 60 248-307 64-124 (125)
122 COG1742 Uncharacterized conser 67.9 11 0.00024 28.0 4.1 47 265-311 61-107 (109)
123 COG3169 Uncharacterized protei 65.1 17 0.00037 26.6 4.6 31 277-307 84-114 (116)
124 PRK02237 hypothetical protein; 63.7 34 0.00073 25.7 6.1 47 87-139 57-104 (109)
125 PF01102 Glycophorin_A: Glycop 61.3 7.3 0.00016 30.1 2.4 20 294-313 75-94 (122)
126 PF02694 UPF0060: Uncharacteri 60.9 30 0.00064 25.9 5.3 52 82-139 50-102 (107)
127 PF04342 DUF486: Protein of un 60.3 70 0.0015 23.9 8.2 50 83-138 56-106 (108)
128 COG3086 RseC Positive regulato 54.8 7.7 0.00017 30.7 1.5 22 262-283 74-95 (150)
129 PF11044 TMEMspv1-c74-12: Plec 53.9 8.7 0.00019 23.5 1.3 18 288-305 2-19 (49)
130 PRK13108 prolipoprotein diacyl 53.1 74 0.0016 30.7 8.1 24 288-311 254-277 (460)
131 PF06813 Nodulin-like: Nodulin 49.3 1.8E+02 0.004 25.5 11.8 106 192-303 60-175 (250)
132 PF07444 Ycf66_N: Ycf66 protei 49.1 20 0.00043 25.7 2.8 32 286-317 3-34 (84)
133 PF07168 Ureide_permease: Urei 47.7 17 0.00038 32.6 2.8 112 1-115 1-125 (336)
134 COG4657 RnfA Predicted NADH:ub 47.3 99 0.0022 25.1 6.6 70 98-194 81-157 (193)
135 PF05297 Herpes_LMP1: Herpesvi 46.5 6.6 0.00014 34.7 0.0 45 87-137 48-94 (381)
136 COG1742 Uncharacterized conser 46.0 1.2E+02 0.0027 22.6 6.5 40 95-140 65-104 (109)
137 MTH00057 ND6 NADH dehydrogenas 44.1 1.9E+02 0.0041 24.1 10.6 34 277-310 132-165 (186)
138 PF15102 TMEM154: TMEM154 prot 43.0 29 0.00062 27.6 3.0 19 296-314 69-87 (146)
139 COG3169 Uncharacterized protei 40.8 1.5E+02 0.0032 21.9 8.4 30 103-138 84-113 (116)
140 COG2271 UhpC Sugar phosphate p 38.9 2.9E+02 0.0064 26.5 9.5 135 169-315 66-212 (448)
141 PF06946 Phage_holin_5: Phage 37.8 1.6E+02 0.0035 21.5 7.3 60 254-313 22-85 (93)
142 PF15048 OSTbeta: Organic solu 36.4 59 0.0013 25.0 3.7 28 281-308 25-56 (125)
143 PF13038 DUF3899: Domain of un 34.7 35 0.00076 24.6 2.3 20 289-308 3-22 (92)
144 TIGR00544 lgt prolipoprotein d 34.7 40 0.00087 30.1 3.1 26 288-313 246-271 (278)
145 PRK12437 prolipoprotein diacyl 34.2 42 0.00092 29.8 3.2 24 288-311 235-258 (269)
146 PF15471 TMEM171: Transmembran 34.2 57 0.0012 28.7 3.7 24 290-313 161-184 (319)
147 PF09656 PGPGW: Putative trans 34.0 1.3E+02 0.0029 19.4 4.7 45 124-194 5-49 (53)
148 PHA02902 putative IMV membrane 33.7 85 0.0019 21.0 3.7 24 293-316 8-32 (70)
149 PF06570 DUF1129: Protein of u 33.4 2.9E+02 0.0064 23.2 10.4 34 60-94 145-178 (206)
150 PF06609 TRI12: Fungal trichot 32.5 5.4E+02 0.012 26.0 12.2 17 124-140 240-256 (599)
151 KOG1623 Multitransmembrane pro 31.2 1.5E+02 0.0034 25.8 6.0 31 165-195 124-154 (243)
152 TIGR01167 LPXTG_anchor LPXTG-m 30.5 88 0.0019 17.5 3.1 13 289-301 11-23 (34)
153 PF07698 7TM-7TMR_HD: 7TM rece 30.4 3.1E+02 0.0067 22.6 17.9 33 187-220 120-152 (194)
154 PRK11902 ampG muropeptide tran 30.0 4.5E+02 0.0097 24.3 13.9 15 292-306 372-386 (402)
155 PF04246 RseC_MucC: Positive r 29.3 35 0.00076 26.7 1.7 16 267-282 72-87 (135)
156 PF06166 DUF979: Protein of un 29.2 4.1E+02 0.0088 24.1 8.3 26 197-222 118-143 (308)
157 PF13347 MFS_2: MFS/sugar tran 29.1 4.7E+02 0.01 24.5 9.7 48 77-124 25-72 (428)
158 PRK10489 enterobactin exporter 28.3 4.8E+02 0.01 24.2 13.2 17 292-308 382-398 (417)
159 PF02487 CLN3: CLN3 protein; 28.3 5.2E+02 0.011 24.5 9.6 39 96-140 68-108 (402)
160 TIGR00905 2A0302 transporter, 28.2 5.4E+02 0.012 24.7 15.4 44 269-312 395-438 (473)
161 PRK01637 hypothetical protein; 28.2 4.3E+02 0.0093 23.5 14.6 27 289-315 247-273 (286)
162 PRK00052 prolipoprotein diacyl 28.2 58 0.0013 28.9 3.0 25 288-312 237-261 (269)
163 PF08693 SKG6: Transmembrane a 27.7 47 0.001 20.1 1.6 18 294-311 21-38 (40)
164 PF12606 RELT: Tumour necrosis 26.7 1.4E+02 0.003 19.1 3.6 16 297-312 12-27 (50)
165 PF05961 Chordopox_A13L: Chord 26.1 1.3E+02 0.0027 20.5 3.5 20 292-311 6-25 (68)
166 CHL00196 psbY photosystem II p 25.4 1.3E+02 0.0029 17.7 3.1 23 168-190 5-27 (36)
167 COG2246 Predicted membrane pro 24.9 2.4E+02 0.0052 22.2 5.7 61 55-119 7-69 (139)
168 PF08611 DUF1774: Fungal prote 24.8 1.2E+02 0.0025 22.4 3.5 11 325-335 87-97 (97)
169 PF07214 DUF1418: Protein of u 23.6 2.8E+02 0.0061 20.4 5.2 16 294-309 51-66 (96)
170 PRK05122 major facilitator sup 22.9 5.9E+02 0.013 23.3 13.3 33 276-308 355-387 (399)
171 PF05545 FixQ: Cbb3-type cytoc 22.5 84 0.0018 19.7 2.2 18 296-313 18-35 (49)
172 PHA03049 IMV membrane protein; 21.7 1.6E+02 0.0036 19.9 3.4 18 293-310 7-24 (68)
173 PF10754 DUF2569: Protein of u 21.4 3.9E+02 0.0085 21.2 6.4 31 164-194 116-146 (149)
174 PRK05771 V-type ATP synthase s 21.2 8.5E+02 0.019 24.7 10.2 29 285-313 502-530 (646)
175 PRK11469 hypothetical protein; 21.2 62 0.0013 27.1 1.7 39 269-307 47-86 (188)
176 PF15345 TMEM51: Transmembrane 21.1 90 0.0019 26.9 2.6 22 293-314 66-87 (233)
177 COG2211 MelB Na+/melibiose sym 21.0 7.8E+02 0.017 23.9 11.5 117 78-214 37-163 (467)
178 PRK10666 ammonium transporter; 20.9 7.5E+02 0.016 23.7 16.0 23 63-85 221-243 (428)
179 PF08802 CytB6-F_Fe-S: Cytochr 20.6 2E+02 0.0044 17.3 3.3 34 54-87 4-37 (39)
180 TIGR02865 spore_II_E stage II 20.1 1E+03 0.022 24.9 15.4 45 88-138 10-54 (764)
No 1
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=100.00 E-value=1.4e-37 Score=285.36 Aligned_cols=305 Identities=37% Similarity=0.668 Sum_probs=240.0
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhcc-CCCCccCHHHHHHHHHHHHHHHHHHHHH
Q 019712 1 MALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYR-SKGPVLTFSLLCKFFMLGVLGICLVQIF 78 (337)
Q Consensus 1 ml~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 78 (337)
|++..++++...++.|.+++.+++|..+.++|+.++++++++ ++.+ +| +++++.+++++..+.+.|+++ ..++.+
T Consensus 18 ~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~--~~~~~~~~~~~~~~~~l~l~g~~g-~~~~~~ 94 (358)
T PLN00411 18 MLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFT--NRSRSLPPLSVSILSKIGLLGFLG-SMYVIT 94 (358)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHH--HHhcccCcchHHHHHHHHHHHHHH-HHHHHH
Confidence 577889999999999999999999999999999999999988 6554 33 233445678889999999998 788889
Q ss_pred HHHhhcccCcchhhhhcchhHHHHHHHHHHH------hhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCC-C
Q 019712 79 AITGIKYSSPTLASAMGNLIPGITFLLAVFF------RMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFS-S 151 (337)
Q Consensus 79 ~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~------~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~-~ 151 (337)
++.|++|++++.++++.++.|+++.++++++ +|||++.+ +++|++++++|+.++...++....... .
T Consensus 95 ~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~------~~~G~~l~~~Gv~ll~~~~g~~~~~~~~~ 168 (358)
T PLN00411 95 GYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVA------KVMGTILSLIGALVVIFYHGPRVFVASSP 168 (358)
T ss_pred HHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHH------HHHHHHHHHHHHHHHHHccCccccccccc
Confidence 9999999999999999999999999999999 58888888 999999999999987543332110000 0
Q ss_pred CC-C-CCCCC-CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccC-CCcc
Q 019712 152 PS-N-SNIQL-PVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERN-PSAW 227 (337)
Q Consensus 152 ~~-~-~~~~~-~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~ 227 (337)
.. + .+++. ...+..+...|+++++.++++||+|.+.+|+..+++++.....+++..++.+...+.....+++ ...|
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~lG~~l~l~aa~~wa~~~il~~~~~~~~~~~~~~t~~~~~~~~~~~~~~~l~~~~~~~~~~ 248 (358)
T PLN00411 169 PYLNFRQLSPPLSSSNSDWLIGGALLTIQGIFVSVSFILQAHIMSEYPAAFTVSFLYTVCVSIVTSMIGLVVEKNNPSVW 248 (358)
T ss_pred ccccccccccccCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHhHHHHHHHHHHHHHHHHHHHHHccCCcccc
Confidence 00 0 00000 0111233457999999999999999999999988997556777788777777666666554432 2233
Q ss_pred cccCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 228 KLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
..........+++.+++ +.++|.+|++++++.+|++++++.+++|+++.+++++++||++++.+++|+++|+.|+++..
T Consensus 249 ~~~~~~~~~~i~y~~i~-t~lay~lw~~~v~~~ga~~as~~~~L~PV~a~llg~l~LgE~lt~~~~iG~~LIl~Gv~l~~ 327 (358)
T PLN00411 249 IIHFDITLITIVTMAII-TSVYYVIHSWTVRHKGPLYLAIFKPLSILIAVVMGAIFLNDSLYLGCLIGGILITLGFYAVM 327 (358)
T ss_pred eeccchHHHHHHHHHHH-HHHHHHHHHHHHhccCchHHHHHHhHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHH
Confidence 22222334457777775 56899999999999999999999999999999999999999999999999999999999998
Q ss_pred hccCcccc
Q 019712 308 WAQGKESN 315 (337)
Q Consensus 308 ~~~~~~~~ 315 (337)
+.+++|.+
T Consensus 328 ~~~~~~~~ 335 (358)
T PLN00411 328 WGKANEEK 335 (358)
T ss_pred hhhhhhhh
Confidence 76665533
No 2
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=100.00 E-value=2.5e-32 Score=246.38 Aligned_cols=274 Identities=14% Similarity=0.119 Sum_probs=227.9
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
++..++||.++++.|... ++++|.+++++|+.++.+++++ ...+ +++. .++++++.....|.++...++.+++
T Consensus 14 ~~~~~iWg~~~~~~K~~~-~~~~p~~~~~~R~~~a~l~ll~~~~~~---~~~~--~~~~~~~~~~~~g~~~~~~~~~~~~ 87 (292)
T PRK11272 14 FALYIIWGSTYLVIRIGV-ESWPPLMMAGVRFLIAGILLLAFLLLR---GHPL--PTLRQWLNAALIGLLLLAVGNGMVT 87 (292)
T ss_pred HHHHHHHhhHHHHHHHHh-ccCCHHHHHHHHHHHHHHHHHHHHHHh---CCCC--CcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999987 7999999999999999999888 5433 2222 2567888888899887778888999
Q ss_pred Hhh-cccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCC
Q 019712 81 TGI-KYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQL 159 (337)
Q Consensus 81 ~al-~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 159 (337)
.+. ++++++.++++.++.|+++.+++++ +|||++++ +++|+++++.|+.++.. ++.
T Consensus 88 ~~~~~~~~a~~a~~l~~~~Pl~~~lla~~-~~e~~~~~------~~~~~~la~~Gv~ll~~-~~~--------------- 144 (292)
T PRK11272 88 VAEHQNVPSGIAAVVVATVPLFTLCFSRL-FGIRTRKL------EWLGIAIGLAGIVLLNS-GGN--------------- 144 (292)
T ss_pred HHHHccCcHHHHHHHHHHHHHHHHHHHHH-hcccCchh------HHHHHHHHHHhHHHHhc-Ccc---------------
Confidence 999 9999999999999999999999986 69999999 99999999999988732 111
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHH
Q 019712 160 PVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVI 239 (337)
Q Consensus 160 ~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
.+....|++++++++++||.+.+..|+..++ ++.....++...+.+...+.....+.+... ..+...|..++
T Consensus 145 ----~~~~~~G~l~~l~a~~~~a~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~i~ 216 (292)
T PRK11272 145 ----LSGNPWGAILILIASASWAFGSVWSSRLPLP--VGMMAGAAEMLAAGVVLLIASLLSGERLTA--LPTLSGFLALG 216 (292)
T ss_pred ----cccchHHHHHHHHHHHHHHHHHHHHHhcCCC--cchHHHHHHHHHHHHHHHHHHHHcCCcccc--cCCHHHHHHHH
Confidence 0122469999999999999999999996433 345566788888888777766544322111 12346788999
Q ss_pred HHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCc
Q 019712 240 YAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGK 312 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~ 312 (337)
+.+++++.+++.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++++.|+++.++++++
T Consensus 217 ~l~i~~s~~~~~l~~~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~~iiG~~lIi~gv~~~~~~~~~ 289 (292)
T PRK11272 217 YLAVFGSIIAISAYMYLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPIEWLALGVIVFAVVLVTLGKYL 289 (292)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999999999999999999999999999999999999999999999999999999999999998775553
No 3
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=100.00 E-value=3.1e-32 Score=246.61 Aligned_cols=275 Identities=19% Similarity=0.197 Sum_probs=214.0
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAIT 81 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 81 (337)
++++++||.++++.|... ++++|..++++|+.++++.+++.. + +++ .++ +.....|.+....+..+++.
T Consensus 10 l~~~~~Wg~~~~~~k~~~-~~~~p~~~~~~R~~~a~~~l~~~~-~---~~~---~~~---~~~~~~g~~~~~~~~~~~~~ 78 (299)
T PRK11453 10 LLVVVVWGLNFVVIKVGL-HNMPPLMLAGLRFMLVAFPAIFFV-A---RPK---VPL---NLLLGYGLTISFGQFAFLFC 78 (299)
T ss_pred HHHHHHHhhhHHHHHHHH-hcCCHHHHHHHHHHHHHHHHHHHh-c---CCC---Cch---HHHHHHHHHHHHHHHHHHHH
Confidence 567899999999999997 789999999999999877665521 1 211 122 23445566554566678889
Q ss_pred hhcc-cCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCC
Q 019712 82 GIKY-SSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLP 160 (337)
Q Consensus 82 al~~-~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
+++| .+++.++++.++.|+++.+++++++|||++.+ ++++++++++|+.++.. ++.
T Consensus 79 ~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~------~~~~~~l~~~Gv~ll~~-~~~---------------- 135 (299)
T PRK11453 79 AINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGK------QLAGIALAIFGVLVLIE-DSL---------------- 135 (299)
T ss_pred HHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHhHHHhcc-ccC----------------
Confidence 9988 58899999999999999999999999999999 99999999999998742 111
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCC--hhHHHHHHHHHHHHHHHHHHHhhccCC---CcccccCcchH
Q 019712 161 VSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPD--KINLVFFSCFFGTIQCAVVSIIVERNP---SAWKLQPGIQR 235 (337)
Q Consensus 161 ~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~~ 235 (337)
++......|+++++.++++|+.|.+.+|+..++.++ ......+....+.+.........+.+. ..+...+...|
T Consensus 136 -~~~~~~~~G~~l~l~aal~~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (299)
T PRK11453 136 -NGQHVAMLGFMLTLAAAFSWACGNIFNKKIMSHSTRPAVMSLVVWSALIPIIPFFVASLILDGSATMIHSLVTIDMTTI 214 (299)
T ss_pred -CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhcccCccchhHHHHHHHHHHHHHHHHHHHHhcCchhhhhhhccCCHHHH
Confidence 111123479999999999999999999997665532 233444555554443333333333221 11112244678
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 236 TAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
..+++.+++++.++|.+|++++++.++.+++.+.+++|+++.+++++++||++++.+++|++++++|+++..+.++
T Consensus 215 ~~l~~l~i~~t~~~~~l~~~~l~~~~a~~~s~~~~l~Pv~a~~~~~l~lgE~~~~~~~iG~~lI~~gv~l~~~~~~ 290 (299)
T PRK11453 215 LSLMYLAFVATIVGYGIWGTLLGRYETWRVAPLSLLVPVVGLASAALLLDERLTGLQFLGAVLIMAGLYINVFGLR 290 (299)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHHHhcchh
Confidence 8999999999999999999999999999999999999999999999999999999999999999999998876554
No 4
>PRK11689 aromatic amino acid exporter; Provisional
Probab=100.00 E-value=1.1e-31 Score=242.50 Aligned_cols=277 Identities=14% Similarity=0.098 Sum_probs=207.9
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAIT 81 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 81 (337)
++++++||.+++..|... ++++|..+.++|+.++.+++.+.. ++++. ++ .+++..+.+.++...++.+++.
T Consensus 10 l~a~~~Wg~~~~~~k~~~-~~~~P~~~~~~R~~~a~l~l~~~~----~~~~~---~~-~~~~~~~~~~l~~~~~~~~~~~ 80 (295)
T PRK11689 10 LIAILLWSTMVGLIRGVS-ESLGPVGGAAMIYSVSGLLLLLTV----GFPRL---RQ-FPKRYLLAGGLLFVSYEICLAL 80 (295)
T ss_pred HHHHHHHHHHHHHHHHHH-ccCChHHHHHHHHHHHHHHHHHHc----ccccc---cc-ccHHHHHHHhHHHHHHHHHHHH
Confidence 567899999999999997 899999999999999998877631 11111 11 1223344555566888888888
Q ss_pred hhcc----cCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCC
Q 019712 82 GIKY----SSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNI 157 (337)
Q Consensus 82 al~~----~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 157 (337)
++++ .+++.++++.++.|+++.+++++++|||++++ +++|++++++|+.++.. .+...+..
T Consensus 81 a~~~~~~~~~a~~a~~l~~~~Pi~~~ll~~~~~~e~~~~~------~~~g~~l~~~Gv~li~~-~~~~~~~~-------- 145 (295)
T PRK11689 81 SLGYANTRRQAIEVGMVNYLWPSLTILFAVLFNGQKANWL------LIPGLLLALAGVAWVLG-GDNGLSLA-------- 145 (295)
T ss_pred HHHHhhccccchHHHHHHHHhHHHHHHHHHHHhcCCccHH------HHHHHHHHHHhHhheec-CCccchhh--------
Confidence 8865 57788889999999999999999999999999 99999999999998842 21110000
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHH
Q 019712 158 QLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTA 237 (337)
Q Consensus 158 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
+...+..+...|+++++.++++||.|.+..|+..+++ ++..... ..+.+...+.....+ +. ... .+...|..
T Consensus 146 -~~~~~~~~~~~G~~~~l~aa~~~A~~~v~~k~~~~~~-~~~~~~~---~~~~~~l~~~~~~~~-~~-~~~-~~~~~~~~ 217 (295)
T PRK11689 146 -ELINNIASNPLSYGLAFIGAFIWAAYCNVTRKYARGK-NGITLFF---ILTALALWIKYFLSP-QP-AMV-FSLPAIIK 217 (295)
T ss_pred -hhhhccccChHHHHHHHHHHHHHHHHHHHHhhccCCC-CchhHHH---HHHHHHHHHHHHHhc-Cc-ccc-CCHHHHHH
Confidence 0000111234699999999999999999999987666 4554322 223333333333222 21 111 23356777
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 238 VIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
+++.++ ++.++|.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++|+.|+++..+.++
T Consensus 218 l~~~~~-~t~~~~~l~~~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~~~iG~~lI~~gv~~~~~~~~ 290 (295)
T PRK11689 218 LLLAAA-AMGFGYAAWNVGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFSFWQGVAMVTAGSLLCWLATR 290 (295)
T ss_pred HHHHHH-HHHHHHHHHHHHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHhHHHHhhhHh
Confidence 777774 7889999999999999999999999999999999999999999999999999999999988865443
No 5
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=100.00 E-value=6.2e-31 Score=237.38 Aligned_cols=274 Identities=14% Similarity=0.075 Sum_probs=216.6
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 1 MALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 1 ml~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
|+++.++|+....+.|.+. ++++|.++.++|++++.+++++...+ ++ .+.++++++..+..|.+. ...+.+++
T Consensus 17 ~~la~~~~~~~~~~~K~~~-~~~~~~~~~~~R~~~a~l~l~~~~~~--~~---~~~~~~~~~~~~~~g~~~-~~~~~~~~ 89 (293)
T PRK10532 17 LLIAMASIQSGASLAKSLF-PLVGAPGVTALRLALGTLILIAIFKP--WR---LRFAKEQRLPLLFYGVSL-GGMNYLFY 89 (293)
T ss_pred HHHHHHHHHhhHHHHHHHH-HHcCHHHHHHHHHHHHHHHHHHHHhH--Hh---ccCCHHHHHHHHHHHHHH-HHHHHHHH
Confidence 4678999999999999997 67999999999999999888773222 12 123567888888899885 88889999
Q ss_pred HhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCC
Q 019712 81 TGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLP 160 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
++++|++++.++++..+.|+++.+++. ||+. ++.++.++++|+.++. ..+..
T Consensus 90 ~al~~~~~~~a~~l~~t~Pi~~~ll~~----~~~~--------~~~~~~i~~~Gv~li~-~~~~~--------------- 141 (293)
T PRK10532 90 LSIQTVPLGIAVALEFTGPLAVALFSS----RRPV--------DFVWVVLAVLGLWFLL-PLGQD--------------- 141 (293)
T ss_pred HHHhcccHHHHHHHHHHHHHHHHHHhc----CChH--------HHHHHHHHHHHHheee-ecCCC---------------
Confidence 999999999999999999999998763 4443 3455678899998874 21111
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHH
Q 019712 161 VSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIY 240 (337)
Q Consensus 161 ~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (337)
.+.....|++++++++++||.|.+..|+..+++ ++... .+....+++...+.....+. ... .+...+..+++
T Consensus 142 --~~~~~~~G~ll~l~aa~~~a~~~v~~r~~~~~~-~~~~~-~~~~~~~~~~l~~~~~~~~~-~~~---~~~~~~~~~l~ 213 (293)
T PRK10532 142 --VSHVDLTGAALALGAGACWAIYILSGQRAGAEH-GPATV-AIGSLIAALIFVPIGALQAG-EAL---WHWSILPLGLA 213 (293)
T ss_pred --cccCChHHHHHHHHHHHHHHHHHHHHHHHhccC-CchHH-HHHHHHHHHHHHHHHHHccC-ccc---CCHHHHHHHHH
Confidence 011234799999999999999999999987777 46555 45556666666666554322 111 12344556779
Q ss_pred HHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcccccc
Q 019712 241 AAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNMT 317 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~~~~ 317 (337)
+|++++.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|++++++|++...+.+++|.|-|
T Consensus 214 lgv~~t~~~~~l~~~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~~~iG~~lIl~~~~~~~~~~~~~~~~~ 290 (293)
T PRK10532 214 VAILSTALPYSLEMIALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLIQWLALGAIIAASMGSTLTIRREPKIK 290 (293)
T ss_pred HHHHHHHHHHHHHHHHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHHhcCCCCCCCC
Confidence 99999999999999999999999999999999999999999999999999999999999999999987766544433
No 6
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=100.00 E-value=6.9e-31 Score=233.40 Aligned_cols=258 Identities=19% Similarity=0.212 Sum_probs=218.9
Q ss_pred HHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 019712 8 EVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSS 87 (337)
Q Consensus 8 wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~ 87 (337)
||.+++..|..++++.|+.+..+.|+..+.+.+.+...+ + .+++++++....|.++..+++.+++.|++|++
T Consensus 1 Wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~l~l~~~~~~---~-----~~~~~~~~~~~~~~~~~~l~~~~~~~a~~~~~ 72 (260)
T TIGR00950 1 WGTTGVVIGQYLEGQVPLYFAVFRRLIFALLLLLPLLRR---R-----PPLKRLLRLLLLGALQIGVFYVLYFVAVKRLP 72 (260)
T ss_pred CcchHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHh---c-----cCHhHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 899999999998667899999999998888877773222 2 24667788889998888999999999999999
Q ss_pred cchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchh
Q 019712 88 PTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNW 167 (337)
Q Consensus 88 ~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (337)
+++++++.++.|+++.+++++++|||++++ ++.|+.++++|++++. .+++ ....
T Consensus 73 ~~~~~ii~~~~P~~~~~~~~l~~~e~~~~~------~~~gi~i~~~Gv~li~-~~~~-------------------~~~~ 126 (260)
T TIGR00950 73 VGEAALLLYLAPLYVTLLSDLMGKERPRKL------VLLAAVLGLAGAVLLL-SDGN-------------------LSIN 126 (260)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHhhc-cCCc-------------------cccc
Confidence 999999999999999999999999999999 9999999999999873 2211 1123
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHH
Q 019712 168 ALGGLLLTVTCFSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGT 246 (337)
Q Consensus 168 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (337)
..|+++++.++++|+.+.+..|+..++.+ ++.....+++..+.+...+.....+++. .. +...+..+++.+++++
T Consensus 127 ~~G~~~~l~a~~~~a~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~---~~~~~~~~~~~~~~~~ 202 (260)
T TIGR00950 127 PAGLLLGLGSGISFALGTVLYKRLVKKEGPELLQFTGWVLLLGALLLLPFAWFLGPNP-QA---LSLQWGALLYLGLIGT 202 (260)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhHHhhcCCchHHHHHHHHHHHHHHHHHHHHHhcCCCC-Cc---chHHHHHHHHHHHHHH
Confidence 57999999999999999999999877763 2345555778888888887776543222 21 3466777888999999
Q ss_pred HHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHH
Q 019712 247 VIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGF 303 (337)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~ 303 (337)
.+++.+|++++++.++++++.+.+++|+++.+++++++||++++.+++|+++++.|+
T Consensus 203 ~~~~~~~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~~~~G~~li~~g~ 259 (260)
T TIGR00950 203 ALAYFLWNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLPQLIGGALIIAAV 259 (260)
T ss_pred HHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHhc
Confidence 999999999999999999999999999999999999999999999999999999986
No 7
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=99.97 E-value=4e-30 Score=233.34 Aligned_cols=273 Identities=13% Similarity=0.137 Sum_probs=213.7
Q ss_pred HHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 019712 11 MITLGKAAMSSGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTL 90 (337)
Q Consensus 11 ~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~ 90 (337)
..+..|.+++.-..|..+++.|+.++.+.+.+.+.. ..+++++.++++++.++..|+++ ++++.+.+.+++|++++.
T Consensus 17 ~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~g~~~-~~~~~~~~~~l~~~s~s~ 93 (302)
T TIGR00817 17 FNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSS--GLPKRLKISSALLKLLLPVAIVH-TIGHVTSNVSLSKVAVSF 93 (302)
T ss_pred HHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHh--CCCCCCCCCHHHHHHHHHHHHHH-HHHHHHHHHHHHhccHHH
Confidence 446789998433679999999999987776554211 12233456789999999999996 999999999999999999
Q ss_pred hhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHH
Q 019712 91 ASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALG 170 (337)
Q Consensus 91 ~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 170 (337)
++++.++.|+++++++++++|||++++ ++.|+++++.|+.+.. . ++ ......|
T Consensus 94 ~~li~~~~Pv~~~ll~~~~~~e~~~~~------~~~~l~l~~~Gv~l~~-~-~~-------------------~~~~~~G 146 (302)
T TIGR00817 94 THTIKAMEPFFSVVLSAFFLGQEFPST------LWLSLLPIVGGVALAS-D-TE-------------------LSFNWAG 146 (302)
T ss_pred HHHHHhcchHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHhhhc-C-Cc-------------------ccccHHH
Confidence 999999999999999999999999999 9999999999998652 1 11 1123469
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhh--hCCChhHHHHHHHHHHHHHHHHHHHhhccCCC-c--ccc----cCc-chHHHHHH
Q 019712 171 GLLLTVTCFSSATWKIFQAAVLK--EYPDKINLVFFSCFFGTIQCAVVSIIVERNPS-A--WKL----QPG-IQRTAVIY 240 (337)
Q Consensus 171 ~~~~l~a~~~~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~--~~~----~~~-~~~~~~~~ 240 (337)
++++++++++|+.+.+..|+..+ ++ |+.+...|+...+.+..+|.....+.... . +.. ... ..+...+.
T Consensus 147 ~~~~l~a~~~~a~~~v~~k~~~~~~~~-~~~~~~~~~~~~~~~~l~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (302)
T TIGR00817 147 FLSAMISNITFVSRNIFSKKAMTIKSL-DKTNLYAYISIMSLFLLSPPAFITEGPPFLPHGFMQAISGVNVTKIYTVSLV 225 (302)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCC-CcccHHHHHHHHHHHHHHHHHHHHcchHHHHHHHHHhhcccCchHHHHHHHH
Confidence 99999999999999999999877 56 68999999999999999888775542110 0 000 000 11111222
Q ss_pred HHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCccc
Q 019712 241 AAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKES 314 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~ 314 (337)
.+..+....+.++++++++.++++.++..+++|+++++++++++||++|..+++|+++++.|++++++.|.+|+
T Consensus 226 ~~~~~~~~~~~~~~~~l~~~sa~t~sv~~~l~pv~~~~~~~~~lge~lt~~~~~G~~lil~Gv~l~~~~k~~~~ 299 (302)
T TIGR00817 226 AAMGFFHFYQQVAFMLLGRVSPLTHSVGNCMKRVVVIVVSILFFGTKISPQQVFGTGIAIAGVFLYSRVKAQKP 299 (302)
T ss_pred HHHHHHHHHHHHHHHHHccCCchHHHHHhhhhhhheeeeehhhcCCCCchhHHHHHHHHHHHHHHHHHHhccCc
Confidence 22222223334566899999999999999999999999999999999999999999999999999987655443
No 8
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.97 E-value=2.3e-30 Score=233.95 Aligned_cols=269 Identities=13% Similarity=0.067 Sum_probs=199.1
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCC--Cc-cCHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKG--PV-LTFSLLCKFFMLGVLGICLVQI 77 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~--~~-~~~~~~~~~~~~g~l~~~~~~~ 77 (337)
++++++||.+++..|.. ++++|.++.++|+.++.+++.+ ...+ ++.+. ++ .+++++. ....+.++.+.++.
T Consensus 14 l~a~~~wg~~~~~~k~~--~~~~~~~~~~~R~~~a~~~l~~~~~~~--~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~ 88 (296)
T PRK15430 14 LAAYFIWGIAPAYFKLI--YYVPADEILTHRVIWSFFFMVVLMSIC--RQWSYLKTLIQTPQKIF-MLAVSAVLIGGNWL 88 (296)
T ss_pred HHHHHHHHHHHHHHHHh--cCCCHHHHHHHHHHHHHHHHHHHHHHH--ccHHHHHHHHcCHHHHH-HHHHHHHHHHHHHH
Confidence 57889999999999986 5799999999999999988877 5443 21111 01 1233333 33466666789999
Q ss_pred HHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCC
Q 019712 78 FAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNI 157 (337)
Q Consensus 78 ~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~ 157 (337)
++++|++++++++++++.++.|+++.+++++++|||++++ +|.|+++++.|++++. ..+
T Consensus 89 ~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~------~~~g~~l~~~Gv~li~-~~~-------------- 147 (296)
T PRK15430 89 LFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRM------QWLAVILAICGVLVQL-WTF-------------- 147 (296)
T ss_pred HHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHH------HHHHHHHHHHHHHHHH-HHc--------------
Confidence 9999999999999999999999999999999999999999 9999999999999873 111
Q ss_pred CCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHH
Q 019712 158 QLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRT 236 (337)
Q Consensus 158 ~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~ 236 (337)
++. ..+.++++++||.|.+..|+..++.. +......+....+.....+. ...+...+...+...+.
T Consensus 148 ----~~~------~~~~l~aa~~~a~~~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~ 214 (296)
T PRK15430 148 ----GSL------PIIALGLAFSFAFYGLVRKKIAVEAQTGMLIETMWLLPVAAIYLFAI---ADSSTSHMGQNPMSLNL 214 (296)
T ss_pred ----CCc------cHHHHHHHHHHHHHHHHHHhcCCCCchhHHHHHHHHHHHHHHHHHHH---ccCCcccccCCcHHHHH
Confidence 000 14578899999999999998643221 12333334444443332221 11111111111112233
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 237 AVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
.+.+.++ .+.+++.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|+++|+.|+.+.....
T Consensus 215 ~~~~~g~-~t~i~~~~~~~a~~~~~a~~~s~~~~l~Pv~a~~~g~l~l~E~~~~~~~~G~~lI~~~~~v~~~~~ 287 (296)
T PRK15430 215 LLIAAGI-VTTVPLLCFTAAATRLRLSTLGFFQYIGPTLMFLLAVTFYGEKPGADKMVTFAFIWVALAIFVMDA 287 (296)
T ss_pred HHHHHHH-HHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 3444454 677999999999999999999999999999999999999999999999999999999888777543
No 9
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.96 E-value=2.6e-27 Score=212.65 Aligned_cols=270 Identities=11% Similarity=0.081 Sum_probs=196.2
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
++++++|+...+..|... ++-++. .+++.....+.+.+ ...+. .++..+..++ +++...+.+.++...++.+++
T Consensus 7 ~~aa~~~a~~~~~~k~~~-~~~~~~--~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 81 (281)
T TIGR03340 7 VFSALMHAGWNLMAKSHA-DKEPDF--LWWALLAHSVLLTPYGLWYL-AQVGWSRLPA-TFWLLLAISAVANMVYFLGLA 81 (281)
T ss_pred HHHHHHHHHHHHHHhhcC-CchhHH--HHHHHHHHHHHHHHHHHHhc-ccCCCCCcch-hhHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999664 443443 46667777777776 43320 1222233334 344455555555699999999
Q ss_pred HhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCC
Q 019712 81 TGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLP 160 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~ 160 (337)
.|+++.+++.++++.++.|+++.+++++++|||++.+ +|+|+.+++.|+.++.. ++.
T Consensus 82 ~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~------~~~g~~~~~~Gv~ll~~-~~~---------------- 138 (281)
T TIGR03340 82 QAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPL------AWLGILIITLGLLVLGL-SRF---------------- 138 (281)
T ss_pred HHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHH------HHHHHHHHHHHHHHHhc-ccc----------------
Confidence 9999999999999999999999999999999999999 99999999999998742 111
Q ss_pred CCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhH---HHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHH
Q 019712 161 VSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKIN---LVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTA 237 (337)
Q Consensus 161 ~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~---~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~ 237 (337)
. .....|+.++++++++|+.|.+..|+..++.++... ...+......+...+.....+.. ... .+...+..
T Consensus 139 -~--~~~~~g~~~~l~aal~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~ 212 (281)
T TIGR03340 139 -A--QHRRKAYAWALAAALGTAIYSLSDKAAALGVPAFYSALGYLGIGFLAMGWPFLLLYLKRHGR--SMF-PYARQILP 212 (281)
T ss_pred -c--ccchhHHHHHHHHHHHHHHhhhhccccccchhcccccHHHHHHHHHHHHHHHHHHHHHHhcc--chh-hhHHHHHH
Confidence 0 012358889999999999999998876444421111 22222222211111111111111 111 12234556
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHH
Q 019712 238 VIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYA 305 (337)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~ 305 (337)
.++.+.+++.+++.+|++++++.+++.++.+.+++|+++.+++++++||++++.+++|++++++|+.+
T Consensus 213 ~~~~~~~~s~l~~~l~~~al~~~~a~~~~~~~~l~pv~a~l~g~~~lgE~~~~~~~iG~~lil~Gv~l 280 (281)
T TIGR03340 213 SATLGGLMIGGAYALVLWAMTRLPVATVVALRNTSIVFAVVLGIWFLNERWYLTRLMGVCIIVAGLVV 280 (281)
T ss_pred HHHHHHHHHHHHHHHHHHHHhhCCceEEEeecccHHHHHHHHHHHHhCCCccHHHHHHHHHHHHhHHh
Confidence 67888888899999999999999999999999999999999999999999999999999999999875
No 10
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=99.96 E-value=1.7e-26 Score=207.90 Aligned_cols=289 Identities=17% Similarity=0.187 Sum_probs=224.9
Q ss_pred HHHHHHHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHH-HHHHhhcc-CCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 5 EIGEVGMITLGKAAMSSGMS-NFVYVVYYNALGTFILLH-YFIYNTYR-SKGPVLTFSLLCKFFMLGVLGICLVQIFAIT 81 (337)
Q Consensus 5 ~~~wg~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~-~~~~~~~~-~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 81 (337)
+++-..+.+.+....+.+.+ |...++.-++.-.++..+ ...+ ++ ++..+..+++|+++++.+++- +.++.+.+.
T Consensus 22 sl~~~~t~~~s~~l~~~~~~~P~~Qs~~~Y~~l~~vy~~~~~~r--~~~~~~~~~~~~~~w~y~lla~~D-v~aN~~~v~ 98 (334)
T PF06027_consen 22 SLCITGTGTFSSLLANKGVNIPTFQSFFNYVLLALVYTPILLYR--RGFKKWLKVLKRPWWKYFLLALLD-VEANYLVVL 98 (334)
T ss_pred HHHHHhHHHHHHHHHhcCccCcHHHHHHHHHHHHHHHhhhhhhc--cccccchhhcchhHHHHHHHHHHH-HHHHHHHHH
Confidence 45555566666666555555 777778777777777766 4444 22 222333456788888899996 899999999
Q ss_pred hhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCC
Q 019712 82 GIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPV 161 (337)
Q Consensus 82 al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~ 161 (337)
|++|++.+.++++.++.-+++++++++++|||.++. +++|+++++.|+.++...+....+ ..
T Consensus 99 a~~yTsvtS~~lL~~~~i~~~~~LS~~fL~~ry~~~------~~~gv~i~i~Gv~lv~~sD~~~~~------------~~ 160 (334)
T PF06027_consen 99 AYQYTSVTSVQLLDCTSIPFVMILSFIFLKRRYSWF------HILGVLICIAGVVLVVVSDVLSGS------------DS 160 (334)
T ss_pred HhhcccHhHHHhhhhhhhHHHHHHHHHHHHhhhhHH------HHHHHHHHHhhhhheeeecccccc------------cC
Confidence 999999999999999999999999999999999999 999999999999988654432211 11
Q ss_pred CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCC-cccccCcchHHHHHH
Q 019712 162 SEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPS-AWKLQPGIQRTAVIY 240 (337)
Q Consensus 162 ~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 240 (337)
.+..+..+|+++++++++.||++++..++..++. +......+..+++.++..+...+.|.+.. ..+. +...... ..
T Consensus 161 ~~~~~~i~GDll~l~~a~lya~~nV~~E~~v~~~-~~~~~lg~~Glfg~ii~~iq~~ile~~~i~~~~w-~~~~~~~-~v 237 (334)
T PF06027_consen 161 SSGSNPILGDLLALLGAILYAVSNVLEEKLVKKA-PRVEFLGMLGLFGFIISGIQLAILERSGIESIHW-TSQVIGL-LV 237 (334)
T ss_pred CCCCccchhHHHHHHHHHHHHHHHHHHHHhcccC-CHHHHHHHHHHHHHHHHHHHHHheehhhhhccCC-ChhhHHH-HH
Confidence 3445678999999999999999999999999988 58888899999999988888776665321 2211 2222222 22
Q ss_pred HHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcccccc
Q 019712 241 AAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNMT 317 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~~~~ 317 (337)
...++...-|.+....+++.+|+...+-..+..+.+++++++++|+++++..++|.++|+.|.+++...++++++++
T Consensus 238 ~~~~~lf~~y~l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~ly~~af~lIiiG~vvy~~~~~~~~~~~ 314 (334)
T PF06027_consen 238 GYALCLFLFYSLVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWLYILAFALIIIGFVVYNLAESPEEEAR 314 (334)
T ss_pred HHHHHHHHHHHHHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHHHHHHHHHHHHHhheEEccCCcccccc
Confidence 23335556777778889999999999999999999999999999999999999999999999999988776654433
No 11
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=99.96 E-value=9.7e-27 Score=214.47 Aligned_cols=268 Identities=15% Similarity=0.180 Sum_probs=211.1
Q ss_pred HHHHHHHHHHhCCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCcc--CHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 019712 10 GMITLGKAAMSSGMS-NFVYVVYYNALGTFILLHYFIYNTYRSKGPVL--TFSLLCKFFMLGVLGICLVQIFAITGIKYS 86 (337)
Q Consensus 10 ~~~~~~k~~~~~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~--~~~~~~~~~~~g~l~~~~~~~~~~~al~~~ 86 (337)
......|.++ ++++ |+.++++|++++.++..+.+.. ..+++++. .+++++.++..|+++ ...+...+.|++++
T Consensus 63 ~~~~~nK~vl-~~~~~P~~l~~~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~llp~gl~~-~~~~~~~~~sl~~~ 138 (350)
T PTZ00343 63 LYVVDNKLAL-NMLPLPWTISSLQLFVGWLFALLYWAT--GFRKIPRIKSLKLFLKNFLPQGLCH-LFVHFGAVISMGLG 138 (350)
T ss_pred HHHHHHHHHH-HhCChhHHHHHHHHHHHHHHHHHHHHh--CCCCCCCCCCHHHHHHHHHHHHHHH-HHHHHHHHHHHhhc
Confidence 3456788888 6789 9999999999998876553322 22222333 356888999999998 44566678999999
Q ss_pred CcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcch
Q 019712 87 SPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSN 166 (337)
Q Consensus 87 ~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
+++.++++..+.|+++++++++++|||++++ ++.++++++.|+.+.+. ++ ...
T Consensus 139 svs~~~iika~~Pvft~lls~~~l~ek~s~~------~~l~l~l~v~Gv~l~~~--~~-------------------~~~ 191 (350)
T PTZ00343 139 AVSFTHVVKAAEPVFTALLSILFLKQFLNLY------AYLSLIPIVGGVALASV--KE-------------------LHF 191 (350)
T ss_pred cHHHHHHHHHhhHHHHHHHHHHHhCCCccHH------HHHHHHHHHHHHHheec--cc-------------------chh
Confidence 9999999999999999999999999999999 99999999999999852 11 112
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCC------ChhHHHHHHHHHHHHHHHHHHHhhccCC--Cccc----ccCcch
Q 019712 167 WALGGLLLTVTCFSSATWKIFQAAVLKEYP------DKINLVFFSCFFGTIQCAVVSIIVERNP--SAWK----LQPGIQ 234 (337)
Q Consensus 167 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~~~~~~~--~~~~----~~~~~~ 234 (337)
...|++++++++++|+.+.+..|+..++.+ ++.+...++...+.++.+|.....|... ..+. ......
T Consensus 192 ~~~G~~~~l~s~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lp~~~~~e~~~~~~~~~~~~~~~~~~~ 271 (350)
T PTZ00343 192 TWLAFWCAMLSNLGSSLRSIFAKKTMKNKSEIGENLTASNIYMLLTLIASLISLPLVLFFEGKKWVPVWTNYTANMTNYT 271 (350)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccCCHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhhhcccccc
Confidence 357999999999999999999999876541 3555666778899999998877554311 1110 001112
Q ss_pred HHHHHHHHHHHHHHHHHHHHH----HhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhc
Q 019712 235 RTAVIYAAIVGTVIRSSIIAW----CLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 309 (337)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~----~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~ 309 (337)
+..+.+ .++.+++++.+++. +++++++.+.++..+++|+++++++++++||++|+.+++|+++++.|++++++-
T Consensus 272 ~~~~l~-~i~~s~l~~~l~n~~~f~~l~~~s~~t~sv~~~lk~V~~iv~s~l~~ge~lt~~~~iG~~lii~Gv~lYs~~ 349 (350)
T PTZ00343 272 KGIIIF-KIFFSGVWYYLYNEVAFYCLGKVNQVTHAVANTLKRVVIIVSSIIIFQTQVTLLGYLGMAVAILGALLYSLF 349 (350)
T ss_pred hHHHHH-HHHHHHHHHHHHHHHHHHHHhccchhHHHHHHHHHHHHHhhhhHHHhCCCCchHhHHHHHHHHHHHHHHhhc
Confidence 223333 34566888888884 999999999999999999999999999999999999999999999999998764
No 12
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.94 E-value=9.9e-25 Score=193.39 Aligned_cols=242 Identities=11% Similarity=0.039 Sum_probs=176.7
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCC-----CCccCHH-HHHHHHHHHHHHHH
Q 019712 1 MALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSK-----GPVLTFS-LLCKFFMLGVLGIC 73 (337)
Q Consensus 1 ml~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~-----~~~~~~~-~~~~~~~~g~l~~~ 73 (337)
+++++++||.+.++.|.. .+++|.+++++|++++.+++.+ ...+ ++++ .++.+++ .+..+...|++ ..
T Consensus 7 ~i~a~~~wg~~~~~~k~~--~~~~~~~i~~~R~~~a~~~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~g~~-~~ 81 (256)
T TIGR00688 7 SLLASFLFGYMYYYSKLL--KPLPATDILGHRMIWSFPFMLLSVTLF--RQWAALIERLKRIQKRPLILSLLLCGLL-IG 81 (256)
T ss_pred HHHHHHHHHHHHHHHHHh--ccCCHHHHHHHHHHHHHHHHHHHHHHH--cchHHHHHHHhCcccchHHHHHHHHHHH-HH
Confidence 367899999999999984 5799999999999999988777 4333 2111 1112222 24456677777 48
Q ss_pred HHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCC
Q 019712 74 LVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPS 153 (337)
Q Consensus 74 ~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 153 (337)
.++.++++|++++++++++++.++.|+++++++++++|||++++ +++++++++.|++++.. .+.
T Consensus 82 ~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~------~~l~~~~~~~Gv~li~~-~~~--------- 145 (256)
T TIGR00688 82 FNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRF------QFIAVIIATLGVISNIV-LKG--------- 145 (256)
T ss_pred HHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHH------HHHHHHHHHHHHHHHHH-HcC---------
Confidence 99999999999999999999999999999999999999999999 99999999999988732 110
Q ss_pred CCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcc
Q 019712 154 NSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGI 233 (337)
Q Consensus 154 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 233 (337)
+ . ..++++++++|+.|.+..|+..+ . +........ ........+.....+ ........+..
T Consensus 146 ----------~-~----~~~~l~aa~~~a~~~i~~~~~~~-~-~~~~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~ 206 (256)
T TIGR00688 146 ----------S-L----PWEALVLAFSFTAYGLIRKALKN-T-DLAGFCLET-LSLMPVAIYYLLQTD-FATVQQTNPFP 206 (256)
T ss_pred ----------C-c----hHHHHHHHHHHHHHHHHHhhcCC-C-CcchHHHHH-HHHHHHHHHHHHHhc-cCcccccCchh
Confidence 0 0 13578899999999999999643 3 222222211 111112211111111 11111111224
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHH
Q 019712 234 QRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMF 283 (337)
Q Consensus 234 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~ 283 (337)
.|..+++.|++ +.+++.++++++++.+++.++.+.+++|+++.++++++
T Consensus 207 ~~~~l~~~g~~-t~i~~~l~~~a~~~~~a~~~s~~~yl~Pv~~~~~~~~~ 255 (256)
T TIGR00688 207 IWLLLVLAGLI-TGTPLLAFVIAANRLPLNLLGLLQYIGPTIMMLCVSFL 255 (256)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHh
Confidence 67788888875 78999999999999999999999999999999999764
No 13
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=99.93 E-value=3.9e-23 Score=186.01 Aligned_cols=273 Identities=19% Similarity=0.240 Sum_probs=210.0
Q ss_pred chhHHHHHHHHHHHHHHHhCC-CChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSG-MSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~-~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
++..+.|+......|... ++ .++....+.|...+.+...+...+ ++....+ ..+.+++..+.+.++...+..+++
T Consensus 13 l~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 88 (292)
T COG0697 13 LLWGLLWGLSFIALKLAV-ESLDPFLFAAALRFLIAALLLLPLLLL--EPRGLRP-ALRPWLLLLLLALLGLALPFLLLF 88 (292)
T ss_pred HHHHHHHHHHHHHHHHHh-cccCChHHHHHHHHHHHHHHHHHHHHh--hcccccc-cccchHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999986 55 677777777998888884442222 1111111 122245667777777799999999
Q ss_pred HhhcccCcchhhhhcchhHHHHHHHHH-HHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCC
Q 019712 81 TGIKYSSPTLASAMGNLIPGITFLLAV-FFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQL 159 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~~~pv~~~ll~~-~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~ 159 (337)
.++++++++.++++.++.|+++.++++ +++|||++++ ++.++.+++.|++++...++..
T Consensus 89 ~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~------~~~~~~~~~~Gv~lv~~~~~~~-------------- 148 (292)
T COG0697 89 LALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLL------QILGILLALAGVLLILLGGGGG-------------- 148 (292)
T ss_pred HHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHH------HHHHHHHHHHhHHheecCCCcc--------------
Confidence 999999999999999999999999997 6679999999 9999999999999985322111
Q ss_pred CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHH-HHHHHHHHHHHHHHHhhccCCCcccccCcchHHHH
Q 019712 160 PVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVF-FSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAV 238 (337)
Q Consensus 160 ~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
... ...|+.+++.++++|+++.+..|+.. +. ++..... +..........+... .+.+ ...+...+..+
T Consensus 149 ---~~~-~~~g~~~~l~a~~~~a~~~~~~~~~~-~~-~~~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~~~~~~~~ 217 (292)
T COG0697 149 ---GIL-SLLGLLLALAAALLWALYTALVKRLS-RL-GPVTLALLLQLLLALLLLLLFFL-SGFG----APILSRAWLLL 217 (292)
T ss_pred ---hhH-HHHHHHHHHHHHHHHHHHHHHHHHhc-CC-ChHHHHHHHHHHHHHHHHHHHHh-cccc----ccCCHHHHHHH
Confidence 011 56899999999999999999999876 44 3444444 333322222222221 1111 11234678888
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhc
Q 019712 239 IYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 309 (337)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~ 309 (337)
.+.|++++.+++.++++++++.++...+.+.+++|+++.++++++++|+++..+++|+++++.|+.+...+
T Consensus 218 ~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~l~~~e~~~~~~~~G~~li~~g~~l~~~~ 288 (292)
T COG0697 218 LYLGVFSTGLAYLLWYYALRLLGASLVALLSLLEPVFAALLGVLLLGEPLSPAQLLGAALVVLGVLLASLR 288 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHHHHhcc
Confidence 89999998899999999999999999999999999999999999999999999999999999999988866
No 14
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=99.91 E-value=1.6e-22 Score=169.23 Aligned_cols=260 Identities=14% Similarity=0.094 Sum_probs=211.1
Q ss_pred HHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 019712 12 ITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTL 90 (337)
Q Consensus 12 ~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~ 90 (337)
..+.|... ..+++.-.+.+|..++.+++++ ..-+ +.+..+++|..+...|+.. ...|.+||.+++.+|.+.
T Consensus 28 as~Ak~LF-P~vG~~g~t~lRl~~aaLIll~l~RPw------r~r~~~~~~~~~~~yGvsL-g~MNl~FY~si~riPlGi 99 (292)
T COG5006 28 ASFAKSLF-PLVGAAGVTALRLAIAALILLALFRPW------RRRLSKPQRLALLAYGVSL-GGMNLLFYLSIERIPLGI 99 (292)
T ss_pred HHHHHHHc-cccChhhHHHHHHHHHHHHHHHHhhHH------HhccChhhhHHHHHHHHHH-HHHHHHHHHHHHhccchh
Confidence 44667776 7889999999999999999888 4322 2456788999999999995 999999999999999999
Q ss_pred hhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHH
Q 019712 91 ASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALG 170 (337)
Q Consensus 91 ~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 170 (337)
+..+.++.|+...+++ .+|. + +...+.+++.|+.++.. .++ +....+..|
T Consensus 100 AVAiEF~GPL~vA~~~----sRr~--~------d~vwvaLAvlGi~lL~p-~~~-----------------~~~~lDp~G 149 (292)
T COG5006 100 AVAIEFTGPLAVALLS----SRRL--R------DFVWVALAVLGIWLLLP-LGQ-----------------SVWSLDPVG 149 (292)
T ss_pred hhhhhhccHHHHHHHh----ccch--h------hHHHHHHHHHHHHhhee-ccC-----------------CcCcCCHHH
Confidence 9999999999877743 2333 3 56677778888887732 221 122334589
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHH
Q 019712 171 GLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRS 250 (337)
Q Consensus 171 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (337)
..+++.++.||+.|.+..||..+.. +..+-+..-+..++++.+|+......+ .- .++.....-+..+++++.+.|
T Consensus 150 v~~Al~AG~~Wa~YIv~G~r~g~~~-~g~~g~a~gm~vAaviv~Pig~~~ag~-~l---~~p~ll~laLgvavlSSalPY 224 (292)
T COG5006 150 VALALGAGACWALYIVLGQRAGRAE-HGTAGVAVGMLVAALIVLPIGAAQAGP-AL---FSPSLLPLALGVAVLSSALPY 224 (292)
T ss_pred HHHHHHHhHHHHHHHHHcchhcccC-CCchHHHHHHHHHHHHHhhhhhhhcch-hh---cChHHHHHHHHHHHHhcccch
Confidence 9999999999999999999987655 477778888899999999988743322 11 144566677778999999999
Q ss_pred HHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCccc
Q 019712 251 SIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKES 314 (337)
Q Consensus 251 ~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~ 314 (337)
.+-..++++.+....+.++.+||.++.+.|++++||.+|+.||.|+++++.+..-..+..+|+.
T Consensus 225 sLEmiAL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~qwlaI~~ViaAsaG~~lt~~~~~ 288 (292)
T COG5006 225 SLEMIALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLIQWLAIAAVIAASAGSTLTARKPA 288 (292)
T ss_pred HHHHHHHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhccccccCCCC
Confidence 9999999999999999999999999999999999999999999999999999887776555543
No 15
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=99.90 E-value=2.3e-24 Score=181.37 Aligned_cols=284 Identities=16% Similarity=0.159 Sum_probs=215.9
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 019712 6 IGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKY 85 (337)
Q Consensus 6 ~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~ 85 (337)
.++....++.+..+ +.+|.+..-.|++.-.+.-.++.+. ++... -.+....++++++|+.| ..+..+.|+|++|
T Consensus 47 ~ff~~~~vv~t~~~--e~~p~e~a~~r~l~~mlit~pcliy--~~~~v-~gp~g~R~~LiLRg~mG-~tgvmlmyya~~~ 120 (346)
T KOG4510|consen 47 YFFNSCMVVSTKVL--ENDPMELASFRLLVRMLITYPCLIY--YMQPV-IGPEGKRKWLILRGFMG-FTGVMLMYYALMY 120 (346)
T ss_pred HHHhhHHHhhhhhh--ccChhHhhhhhhhhehhhhheEEEE--Eeeee-ecCCCcEEEEEeehhhh-hhHHHHHHHHHhh
Confidence 45555566666653 6799999999977766666663333 23222 12233447889999998 7888899999999
Q ss_pred cCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcc
Q 019712 86 SSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYS 165 (337)
Q Consensus 86 ~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (337)
++.+++++|..+.|+|+.+++|.++|||.+.. ..++..+.+.|+++++ +.+...++..+.++. ++-.
T Consensus 121 mslaDA~vItFssPvft~ifaw~~LkE~~t~~------eaL~s~itl~GVVLIv--RPpFlFG~~t~g~~~-----s~~~ 187 (346)
T KOG4510|consen 121 MSLADAVVITFSSPVFTIIFAWAFLKEPFTKF------EALGSLITLLGVVLIV--RPPFLFGDTTEGEDS-----SQVE 187 (346)
T ss_pred cchhheEEEEecChHHHHHHHHHHHcCCCcHH------HHHHHHHhhheEEEEe--cCCcccCCCcccccc-----cccc
Confidence 99999999999999999999999999999999 9999999999999985 233333221111111 1123
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHH
Q 019712 166 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVG 245 (337)
Q Consensus 166 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (337)
.++.|...++.++++-|.-.++.|+..|+. |....+.|....+.+..++...... ..+++. .+.+++.++.+|+++
T Consensus 188 ~~~~gt~aai~s~lf~asvyIilR~iGk~~-h~~msvsyf~~i~lV~s~I~~~~ig--~~~lP~-cgkdr~l~~~lGvfg 263 (346)
T KOG4510|consen 188 YDIPGTVAAISSVLFGASVYIILRYIGKNA-HAIMSVSYFSLITLVVSLIGCASIG--AVQLPH-CGKDRWLFVNLGVFG 263 (346)
T ss_pred ccCCchHHHHHhHhhhhhHHHHHHHhhccc-cEEEEehHHHHHHHHHHHHHHhhcc--ceecCc-cccceEEEEEehhhh
Confidence 345678888888888888888889887877 5666677777777776655433221 223333 347788888888855
Q ss_pred HHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 246 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
++++++...++|...+..+++..+.+.+++.++++++|||.||++.|.|+++++.+.+....+|..+
T Consensus 264 -figQIllTm~lQiErAGpvaim~~~dvvfAf~wqv~ff~~~Pt~ws~~Ga~~vvsS~v~~a~~kwa~ 330 (346)
T KOG4510|consen 264 -FIGQILLTMGLQIERAGPVAIMTYTDVVFAFFWQVLFFGHWPTIWSWVGAVMVVSSTVWVALKKWAG 330 (346)
T ss_pred -hHHHHHHHHHhhhhccCCeehhhHHHHHHHHHHHHHHhcCCChHHHhhceeeeehhHHHHHHHHHhc
Confidence 7999999999999999999999999999999999999999999999999999999988777655544
No 16
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=99.89 E-value=6.1e-21 Score=171.61 Aligned_cols=268 Identities=15% Similarity=0.139 Sum_probs=201.8
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
++++++||...+..|.. .+.++.++. |..++.+++.. .... +. ++ ...++.+..-++.|.+ ...++.+++
T Consensus 7 lia~~~wGs~g~~~k~~--~g~~~~~~~--~~~~g~l~~~~~~~~~--~~-~~-~~~~~~~~~g~l~G~~-w~ig~~~~~ 77 (290)
T TIGR00776 7 LIPALFWGSFVLINVKI--GGGPYSQTL--GTTFGALILSIAIAIF--VL-PE-FWALSIFLVGLLSGAF-WALGQINQF 77 (290)
T ss_pred HHHHHHHhhhHHHHhcc--CCCHHHHHH--HHHHHHHHHHHHHHHH--hC-Cc-ccccHHHHHHHHHHHH-HHhhhhhHH
Confidence 56899999999999997 378887775 67777777666 4333 22 11 1124445555556666 589999999
Q ss_pred HhhcccCcchhhhhcc-hhHHHHHHHHHHHhhccccccccCccch----hhHHHHHhhhhheeeeccCCCCCCCCCCCCC
Q 019712 81 TGIKYSSPTLASAMGN-LIPGITFLLAVFFRMEKVAIRSRSSQAK----ILGTVVSIAGAFIVSLYKGPPLLGFSSPSNS 155 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~-~~pv~~~ll~~~~~~e~~~~~~~~~~~~----~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~ 155 (337)
.|.++++++.+..+.+ +.+++..+.+.+++|||.+++ + ++|+++.++|++++...+++...
T Consensus 78 ~ai~~~gva~a~~i~~~~~~v~~~l~~~~~f~e~~t~~------~~~~~~~g~~l~l~G~~l~~~~~~~~~~-------- 143 (290)
T TIGR00776 78 KSMRYMGVSKTMPISTGFQLVGGTLFGVIVFGEWSTSI------QTLLGLLALILIIIGVYLTSRSKDKSAG-------- 143 (290)
T ss_pred HHHHHHhHHHHhHHHHHHHHHHHHHHHHHHhhhccchH------HHHHHHHHHHHHHHhHheEEeccccccc--------
Confidence 9999999999999988 899999999999999999999 9 99999999999987533211110
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHH----HHHHHHHHHHHhhccCCCcccccC
Q 019712 156 NIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCF----FGTIQCAVVSIIVERNPSAWKLQP 231 (337)
Q Consensus 156 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~ 231 (337)
+ ++..+..+|+++++.++++|+.|.+..|+. ++ |+.+..+.+.. .+.++..+. . .. .++ .
T Consensus 144 --~---~~~~~~~~Gi~~~l~sg~~y~~~~~~~~~~--~~-~~~~~~~~~~~g~~~~~~~~~~~~---~-~~-~~~---~ 207 (290)
T TIGR00776 144 --I---KSEFNFKKGILLLLMSTIGYLVYVVVAKAF--GV-DGLSVLLPQAIGMVIGGIIFNLGH---I-LA-KPL---K 207 (290)
T ss_pred --c---ccccchhhHHHHHHHHHHHHHHHHHHHHHc--CC-CcceehhHHHHHHHHHHHHHHHHH---h-cc-cch---H
Confidence 0 000233579999999999999999999975 35 57777555554 333333222 1 11 111 2
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhh-ccCceeeeeccchhHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHHHHH
Q 019712 232 GIQRTAVIYAAIVGTVIRSSIIAWCLQ-KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSL----IGTVVIAFGFYAV 306 (337)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~l~-~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~~~ 306 (337)
.+.....+..|++ ..+++.+|..+.+ +.+++..+.+.+.+|+.+.+++++++||+.++.++ +|+++++.|+.+.
T Consensus 208 ~~~~~~~~~~Gi~-~~ia~~~y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~~~~~~~iG~~lIi~~~~l~ 286 (290)
T TIGR00776 208 KYAILLNILPGLM-WGIGNFFYLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKREMIAISVGIILIIIAANIL 286 (290)
T ss_pred HHHHHHHHHHHHH-HHHHHHHHHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcceeehhHHHHHHHHHHHHHH
Confidence 2333334447877 6899999999999 99999999999999999999999999999999999 9999999999877
Q ss_pred Hhc
Q 019712 307 IWA 309 (337)
Q Consensus 307 ~~~ 309 (337)
...
T Consensus 287 ~~~ 289 (290)
T TIGR00776 287 GIG 289 (290)
T ss_pred hcc
Confidence 543
No 17
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=99.88 E-value=2.4e-20 Score=169.18 Aligned_cols=265 Identities=17% Similarity=0.213 Sum_probs=210.2
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHH
Q 019712 25 NFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITF 103 (337)
Q Consensus 25 ~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ 103 (337)
|..+++.+++...+...+ .... ++++. ++..++.++..+++. .++..+.+.|++|+|.+...++.++.|++++
T Consensus 32 ~~~lt~~q~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~~al~~i~~p~~~~~ks~~~i~vm 105 (303)
T PF08449_consen 32 PLFLTFVQFAFNALFSFILLSLF--KFPKS---RKIPLKKYAILSFLF-FLASVLSNAALKYISYPTQIVFKSSKPIPVM 105 (303)
T ss_pred cHHHHHHHHHHHHHHHHHHHHhc--cccCC---CcChHHHHHHHHHHH-HHHHHHHHHHHHhCChHHHHHHhhhHHHHHH
Confidence 889999999998888777 4333 21222 333456778888885 9999999999999999999999999999999
Q ss_pred HHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 019712 104 LLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSAT 183 (337)
Q Consensus 104 ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~ 183 (337)
+++.+++|+|.+++ ++.++++..+|+.+....+..... .+.....+...|+++.+.+.++.|.
T Consensus 106 i~~~l~~~k~y~~~------~~~~v~li~~Gv~~~~~~~~~~~~-----------~~~~~~~~~~~G~~ll~~sl~~~a~ 168 (303)
T PF08449_consen 106 ILGVLILGKRYSRR------QYLSVLLITIGVAIFTLSDSSSSS-----------SSNSSSFSSALGIILLLLSLLLDAF 168 (303)
T ss_pred HHHHHhcCccccHH------HHHHHHHHHhhHheeeeccccccc-----------ccccccccchhHHHHHHHHHHHHHH
Confidence 99999999999999 999999999999998654332211 0111222233499999999999999
Q ss_pred HHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHh--hccCCCccc--ccCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 019712 184 WKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSII--VERNPSAWK--LQPGIQRTAVIYAAIVGTVIRSSIIAWCLQ 258 (337)
Q Consensus 184 ~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~--~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (337)
..+.+++..+++. ++.+.+++.+..+.+..++.... .+.....++ ...+..+..++...+ +..++..+.++..+
T Consensus 169 ~~~~qe~~~~~~~~~~~~~mfy~n~~~~~~~~~~~~~l~~~~~~~~~~f~~~~p~~~~~l~~~s~-~~~~g~~~i~~~~~ 247 (303)
T PF08449_consen 169 TGVYQEKLFKKYGKSPWELMFYTNLFSLPFLLILLFLLPTGEFRSAIRFISAHPSVLLYLLLFSL-TGALGQFFIFYLIK 247 (303)
T ss_pred HHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHHhhHhhHHHHHHHHhHHHHHHHHHHHH-HHHHHHHHHHHHHH
Confidence 9999999988876 78899999999999988777765 222111111 112233344444443 55688888888999
Q ss_pred ccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 259 KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 259 ~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
+.++...+++..++.+++++++++++|+++++.+|+|.+++..|..++.+.++|+
T Consensus 248 ~~~al~~t~v~t~Rk~~sillS~~~f~~~~~~~~~~G~~lv~~g~~~~~~~~~k~ 302 (303)
T PF08449_consen 248 KFSALTTTIVTTLRKFLSILLSVIIFGHPLSPLQWIGIVLVFAGIFLYSYAKKKK 302 (303)
T ss_pred hcCchhhhhHHHHHHHHHHHHHHHhcCCcCChHHHHHHHHhHHHHHHHHHhhccC
Confidence 9999999999999999999999999999999999999999999999999887765
No 18
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=99.88 E-value=1.6e-20 Score=161.56 Aligned_cols=273 Identities=12% Similarity=0.053 Sum_probs=215.8
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCC--ccCHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGP--VLTFSLLCKFFMLGVLGICLVQIF 78 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~--~~~~~~~~~~~~~g~l~~~~~~~~ 78 (337)
+.+.++||..+...|.. ++.++.++...|...+.++++. ....+ +.+... ..+++.+..+.+.+++ +..++..
T Consensus 13 l~Ay~lwG~lp~y~kll--~~~~~~eIlahRviwS~~~~l~ll~~~r-~~~~~~~~~~~p~~~~~~~l~a~l-i~~nW~l 88 (293)
T COG2962 13 LLAYLLWGLLPLYFKLL--EPLPATEILAHRVIWSFPFMLALLFLLR-QWRELKQLLKQPKTLLMLALTALL-IGLNWWL 88 (293)
T ss_pred HHHHHHHHHHHHHHHHH--ccCCHHHHHHHHHHHHHHHHHHHHHHHh-hhHHHHHHHhCcHHHHHHHHHHHH-HHHHHHH
Confidence 46789999999999998 7899999999999999999887 43330 211111 2245567777777777 5999999
Q ss_pred HHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCC
Q 019712 79 AITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQ 158 (337)
Q Consensus 79 ~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~ 158 (337)
|.+|.++..+-++++=.+..|++.++++++++|||+++. ||+++.++.+||...+...++
T Consensus 89 fiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~------Q~iAV~lA~~GV~~~~~~~g~-------------- 148 (293)
T COG2962 89 FIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRL------QWIAVGLAAAGVLIQTWLLGS-------------- 148 (293)
T ss_pred hheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHH------HHHHHHHHHHHHHHHHHHcCC--------------
Confidence 999999999999999999999999999999999999999 999999999999987553332
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHH
Q 019712 159 LPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAV 238 (337)
Q Consensus 159 ~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~ 238 (337)
-++ .++.=+++|+.|...-|+. +. |+.+-.......-....+...++.+...+.....+...+..+
T Consensus 149 -------lpw----val~la~sf~~Ygl~RK~~--~v-~a~~g~~lE~l~l~p~al~yl~~l~~~~~~~~~~~~~~~~LL 214 (293)
T COG2962 149 -------LPW----VALALALSFGLYGLLRKKL--KV-DALTGLTLETLLLLPVALIYLLFLADSGQFLQQNANSLWLLL 214 (293)
T ss_pred -------CcH----HHHHHHHHHHHHHHHHHhc--CC-chHHhHHHHHHHHhHHHHHHHHHHhcCchhhhcCCchHHHHH
Confidence 122 2344588999999986663 33 466666666666666555555544433321221244667777
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 239 IYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 239 ~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
+..|++ +.++..++..+-++++-+..+.++|.+|..-.+++++++||+++..+++..+.|-+|..++.+..-++
T Consensus 215 v~aG~v-TavpL~lf~~aa~~lpls~~G~lqYi~Ptl~fllav~i~~E~~~~~~~~~F~~IW~aL~l~~~d~l~~ 288 (293)
T COG2962 215 VLAGLV-TAVPLLLFAAAAKRLPLSTLGFLQYIEPTLMFLLAVLIFGEPFDSDQLVTFAFIWLALALFSIDGLYT 288 (293)
T ss_pred HHhhHH-HHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 777875 57999999999999999999999999999999999999999999999999999999999998765443
No 19
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=99.85 E-value=1e-19 Score=160.64 Aligned_cols=235 Identities=21% Similarity=0.281 Sum_probs=191.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 60 LLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 60 ~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
..+..+....+. .+.+.++..|+.+++++..+++.+++-+|+.+++.++.+||++.. |.+++++++.|+++++
T Consensus 158 ~ak~sl~fc~lW-F~anl~~naALa~TsVAS~TilSStSs~FtL~la~if~~e~ft~s------Kllav~~si~GViiVt 230 (416)
T KOG2765|consen 158 TAKLSLFFCPLW-FLANLTSNAALAFTSVASTTILSSTSSFFTLFLAAIFPVERFTLS------KLLAVFVSIAGVIIVT 230 (416)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhcchHHHHHHHHHcCcchhhHH------HHHHHHHhhccEEEEE
Confidence 334455666776 888999999999999999999999999999999999999999999 9999999999999997
Q ss_pred eccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC---ChhHHHHHHHHHHHHHHHHH
Q 019712 140 LYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYP---DKINLVFFSCFFGTIQCAVV 216 (337)
Q Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~ 216 (337)
..+..+. ++....+...|+++++++++.||+|.++.||-..+.. |-.....+..++..++++|.
T Consensus 231 ~~~s~~~-------------~~~~a~~~llG~llaL~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~ 297 (416)
T KOG2765|consen 231 MGDSKQN-------------SDLPASRPLLGNLLALLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPP 297 (416)
T ss_pred ecccccc-------------ccCCccchhHHHHHHHHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHH
Confidence 6543321 1233455678999999999999999999998766552 33333345555556666655
Q ss_pred HHhhcc-CCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHH
Q 019712 217 SIIVER-NPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIG 295 (337)
Q Consensus 217 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G 295 (337)
..+.+. ..+.++.++......+++.++++++++-.+|.++.-.+++..+++-+.++.+.+++.+.++-+.++|+.+++|
T Consensus 298 l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSDylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~~iiG 377 (416)
T KOG2765|consen 298 LIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSDYLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSALYIIG 377 (416)
T ss_pred HHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHHHHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHHHHHH
Confidence 554322 2334455555667777888899999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhccCccc
Q 019712 296 TVVIAFGFYAVIWAQGKES 314 (337)
Q Consensus 296 ~~lii~g~~~~~~~~~~~~ 314 (337)
.+.|++|.+++++......
T Consensus 378 si~Ifv~Fv~vn~~~~~~~ 396 (416)
T KOG2765|consen 378 SIPIFVGFVIVNISSENSK 396 (416)
T ss_pred HHHHHHHHhheeccccccc
Confidence 9999999999987665433
No 20
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=99.82 E-value=2.5e-19 Score=159.57 Aligned_cols=272 Identities=14% Similarity=0.157 Sum_probs=215.5
Q ss_pred HHHHHHh--CCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchh
Q 019712 14 LGKAAMS--SGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLA 91 (337)
Q Consensus 14 ~~k~~~~--~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~ 91 (337)
..|..++ ..--|..++..+...+.+.....+..+ ..+..+..++..++.++.+|++. .++..+.+.|+.+.+++.+
T Consensus 35 ~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~-~~~~~~~~~~~~~~~llpl~~~~-~~~~v~~n~Sl~~v~VsF~ 112 (316)
T KOG1441|consen 35 LNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLK-LVPPSKISSKLPLRTLLPLGLVF-CISHVLGNVSLSYVPVSFY 112 (316)
T ss_pred eeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhc-CCCCCccccccchHHHHHHHHHH-HHHHHhcchhhhccchhHH
Confidence 5677775 233488999998888888777632220 22222223556788999999995 9999999999999999999
Q ss_pred hhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHH
Q 019712 92 SAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGG 171 (337)
Q Consensus 92 ~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~ 171 (337)
+.+..++|+++.++++++.+|+.+.. .+..++....|+.+.+..+ ......|.
T Consensus 113 q~iKa~~P~~tvl~~~~~~~~~~s~~------~~lsL~piv~GV~ias~~e---------------------~~fn~~G~ 165 (316)
T KOG1441|consen 113 QTIKALMPPFTVLLSVLLLGKTYSSM------TYLSLLPIVFGVAIASVTE---------------------LSFNLFGF 165 (316)
T ss_pred HHHHhhcchhHHHHHHHHhCCCCcce------EEEEEEEeeeeEEEeeecc---------------------ccccHHHH
Confidence 99999999999999999999999999 9999999999999986421 22345899
Q ss_pred HHHHHHHHHHHHHHHHHHHHhh--hCC-ChhHHHHHHHHHHHHHHH-HHHHhhccCCC---cccccCcchHHHHHHHHHH
Q 019712 172 LLLTVTCFSSATWKIFQAAVLK--EYP-DKINLVFFSCFFGTIQCA-VVSIIVERNPS---AWKLQPGIQRTAVIYAAIV 244 (337)
Q Consensus 172 ~~~l~a~~~~a~~~i~~k~~~~--~~~-~~~~~~~~~~~~~~i~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~ 244 (337)
+.++++.+..+..+++.|+.++ ++. |+.+...++..++.+.++ |.....+++.. ... .........++.. +
T Consensus 166 i~a~~s~~~~al~~I~~~~ll~~~~~~~~~~~ll~y~ap~s~~~Ll~P~~~~~~~~~~~~~~~~-~~~~~~~~~~~~s-v 243 (316)
T KOG1441|consen 166 ISAMISNLAFALRNILSKKLLTSKGESLNSMNLLYYTAPISLIFLLIPFLDYVEGNKFVGFLTA-PWFVTFLILLLNS-V 243 (316)
T ss_pred HHHHHHHHHHHHHHHHHHHhhhccccccCchHHHHHhhhHHHHHHhcchHhhhcccceeeeecc-ccchhhHHHHHHH-H
Confidence 9999999999999999999884 333 899999999999999998 87776655432 110 1111223333333 3
Q ss_pred HHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCccccc
Q 019712 245 GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNM 316 (337)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~~~ 316 (337)
+...-....+..+.+++|.+.++.+...-++.++.++++|+++.|+.+..|.++.++|+++|.+.|.+++++
T Consensus 244 ~~f~~Nls~f~~ig~tSalT~~V~g~~K~~~vi~~s~~iF~~pvt~~n~~G~~iai~Gv~~Y~~~k~~~~~~ 315 (316)
T KOG1441|consen 244 LAFLLNLSAFLVIGRTSALTYSVAGHMKRIVVIVVSWLIFGNPVTFLNALGYAIAILGVFLYSRAKLKEKKG 315 (316)
T ss_pred HHHHHHHHHHHHHcccCchhhhhhccceEEEEEEeEeeeecCCCchhhHHHHHHHHHHHHHHHHHhhhhhcc
Confidence 444555666788999999999999999999999999999999999999999999999999999888776543
No 21
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.73 E-value=6.2e-16 Score=128.41 Aligned_cols=262 Identities=13% Similarity=0.160 Sum_probs=199.4
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHH
Q 019712 25 NFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITF 103 (337)
Q Consensus 25 ~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ 103 (337)
...+++.++....++.=+ ..++ ++. +.++..-+.+..++.- +.+..+-.+.|++|.|-....+-.+..|+-++
T Consensus 53 alaLVf~qC~~N~vfAkvl~~ir--~~~---~~D~t~~~~YaAcs~s-YLlAMVssN~Alq~vpYPTqVlgKScKPIPVM 126 (337)
T KOG1580|consen 53 ALALVFFQCTANTVFAKVLFLIR--KKT---EIDNTPTKMYAACSAS-YLLAMVSSNQALQYVPYPTQVLGKSCKPIPVM 126 (337)
T ss_pred HHHHHHHHHHHHHHHHHhheeec--ccc---cccCCcchHHHHHHHH-HHHHHHhccchhcccCCcHHHhcccCCCccee
Confidence 445666666666665433 3223 221 1222222445555555 58888899999999999999899999999999
Q ss_pred HHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHH
Q 019712 104 LLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSAT 183 (337)
Q Consensus 104 ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~ 183 (337)
+++..+.+++.+++ +..++++...|+.+. +++..... ...+.....|-++.+++...-+.
T Consensus 127 ilGVl~~~KsY~w~------kY~cVL~IV~GValF-mYK~~Kv~-------------g~e~~t~g~GElLL~lSL~mDGl 186 (337)
T KOG1580|consen 127 ILGVLFAHKSYHWR------KYCCVLMIVVGVALF-MYKENKVG-------------GAEDKTFGFGELLLILSLAMDGL 186 (337)
T ss_pred eeehhhhcccccHH------HHHHHHHHHHHHHHh-hccccccC-------------CCcccccchHHHHHHHHHHhccc
Confidence 99999999999999 999999999999998 45432221 13345566899999999999999
Q ss_pred HHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccCCCc--ccccCcchHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 019712 184 WKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSA--WKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKK 260 (337)
Q Consensus 184 ~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 260 (337)
....+.+..+.+. +...++++.++-+.+.+....++.+.-++. +....+..++.+..+++ ++.+++++.+..+...
T Consensus 187 Tg~~Qdrira~yq~~g~~MM~~~NlwStL~Lg~g~lfTGElweF~yF~~RhP~~~~~l~l~ai-~s~LGQ~fIF~tv~~F 265 (337)
T KOG1580|consen 187 TGSIQDRIRASYQRTGTSMMFYTNLWSTLYLGAGLLFTGELWEFFYFVQRHPYVFWDLTLLAI-ASCLGQWFIFKTVEEF 265 (337)
T ss_pred chhHHHHHHHhhccCchhhHHHHHHHHHHHhhhhheehhhHHHHHHHHHhccHHHHHHHHHHH-HHHhhhHHHHHHHHHh
Confidence 9999999877665 567788888888887776555544332221 11223456777777776 6789999999999999
Q ss_pred CceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 261 GPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 261 ~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
+|..-|++....-.|+++.++++++++++.+||+|..++..|...-....++.
T Consensus 266 gPLtCSivTTTRKfFTil~SVllf~npls~rQwlgtvlVF~aL~~D~~~GK~a 318 (337)
T KOG1580|consen 266 GPLTCSIVTTTRKFFTILISVLLFNNPLSGRQWLGTVLVFSALTADVVDGKKA 318 (337)
T ss_pred CCeeEEEEeehHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHHhhhHhhcCCcC
Confidence 99999999999999999999999999999999999999999987766544433
No 22
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.71 E-value=1.4e-15 Score=131.32 Aligned_cols=266 Identities=13% Similarity=0.150 Sum_probs=212.0
Q ss_pred ChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHH
Q 019712 24 SNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGIT 102 (337)
Q Consensus 24 ~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~ 102 (337)
++..+.+++.+.+.++-.. +..+ ++..+ .++-|+.+...++.+ .....+.|+|++|++-....+-.++.-+-+
T Consensus 50 ~~~fL~~~q~l~~~~~s~~~l~~~---k~~~~--~~apl~~y~~is~tn-~~s~~~~yeaLKyvSyPtq~LaKscKmIPV 123 (327)
T KOG1581|consen 50 HSLFLVFCQRLVALLVSYAMLKWW---KKELS--GVAPLYKYSLISFTN-TLSSWCGYEALKYVSYPTQTLAKSCKMIPV 123 (327)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhcc---cccCC--CCCchhHHhHHHHHh-hcchHHHHHHHHhccchHHHHHHHhhhhHH
Confidence 5778888888888887766 4333 22222 233467788899997 999999999999999999999999999999
Q ss_pred HHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHH
Q 019712 103 FLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSA 182 (337)
Q Consensus 103 ~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a 182 (337)
++.+.++.|+|.+.. +....++...|+.+....+++.. .++.+..+...|+.++...-..-+
T Consensus 124 mlmg~Lvy~~ky~~~------eYl~~~LIs~GvsiF~l~~~s~s------------~~~~g~~ns~~G~~Ll~~~L~fDg 185 (327)
T KOG1581|consen 124 MLMGTLVYGRKYSSF------EYLVAFLISLGVSIFSLFPNSDS------------SSKSGRENSPIGILLLFGYLLFDG 185 (327)
T ss_pred HHHHHHHhcCccCcH------HHHHHHHHHhheeeEEEecCCCC------------ccccCCCCchHhHHHHHHHHHHHh
Confidence 999999999999999 99999999999988765533321 122455677899999999999999
Q ss_pred HHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccCCC--cccccCcchHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019712 183 TWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPS--AWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQK 259 (337)
Q Consensus 183 ~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 259 (337)
+.+..|+++.+++. ++..++++.++++++.........+.... .+-...+..+.-++.... +..+++.+.++.+++
T Consensus 186 fTn~tQd~lf~~~k~s~~~mM~~vNLf~~i~~~~~li~qg~~~~av~F~~~hp~~~~Di~l~s~-~gavGQ~FI~~TI~~ 264 (327)
T KOG1581|consen 186 FTNATQDSLFKKYKVSSLHMMFGVNLFSAILNGTYLILQGHLLPAVSFIKEHPDVAFDILLYST-CGAVGQLFIFYTIER 264 (327)
T ss_pred hHHhHHHHHhccCCccHhHHHHHHHHHHHHHHHHhhhcCCCCchHHHHHHcChhHHHHHHHHHH-hhhhhhheehhhHhh
Confidence 99999999988766 78999999999999988766442222111 111122334444455555 456999999999999
Q ss_pred cCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCccc
Q 019712 260 KGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKES 314 (337)
Q Consensus 260 ~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~ 314 (337)
.++.+.+.++.++-++++.++.+.++.+++..||+|..++..|+.+-.+.+++++
T Consensus 265 FGslt~t~I~ttRk~~si~lS~i~f~h~~s~~q~~g~~iVFg~i~l~~~~k~~~~ 319 (327)
T KOG1581|consen 265 FGSLTFTTIMTTRKMVSIMLSCIVFGHPLSSEQWLGVLIVFGGIFLEILLKKKKN 319 (327)
T ss_pred cccHHHHHHHHHHHHHHHHHHHHHhCCccchhhccCeeeehHHHHHHHHHHHhcc
Confidence 9999999999999999999999999999999999999999999998887776633
No 23
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=99.67 E-value=1.2e-13 Score=122.53 Aligned_cols=293 Identities=11% Similarity=0.092 Sum_probs=204.5
Q ss_pred hhHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHH-HHHHhhc--cCCCCc------cCHHHHHHHHHHHHH
Q 019712 3 LVEIGEVGMITLGKAAMSSG---MSNFVYVVYYNALGTFILLH-YFIYNTY--RSKGPV------LTFSLLCKFFMLGVL 70 (337)
Q Consensus 3 ~~~~~wg~~~~~~k~~~~~~---~~~~~~~~~r~~~~~i~l~~-~~~~~~~--~~~~~~------~~~~~~~~~~~~g~l 70 (337)
...+-++......|+.-..+ +.|....++--.+-.++... ++...++ ++.... ..+++...+.+.+++
T Consensus 22 ~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk~~vPa~i 101 (345)
T KOG2234|consen 22 VLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLKVSVPALI 101 (345)
T ss_pred HHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHHHHHHHHH
Confidence 44666777788888875445 56777777766666665555 3332101 111111 134466777888888
Q ss_pred HHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCC
Q 019712 71 GICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFS 150 (337)
Q Consensus 71 ~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~ 150 (337)
+.+.+.+.|.++.+.+++..++..++..+.|+++.++++++|++++ ||.++++.+.|+.++.....++..
T Consensus 102 -YalqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~------Qw~Al~lL~~Gv~~vQ~~~~~~~~--- 171 (345)
T KOG2234|consen 102 -YALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRL------QWMALVLLFAGVALVQLPSLSPTG--- 171 (345)
T ss_pred -HHHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHH------HHHHHHHHHHHHHHHhccCCCCCC---
Confidence 4888889999999999999999999999999999999999999999 999999999999997522221111
Q ss_pred CCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccCCCcccc
Q 019712 151 SPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKL 229 (337)
Q Consensus 151 ~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 229 (337)
+.+.....+...|....+.+++..++..++-.+.+|+.. +.+....-..+++.++.+...+..+.+...|..
T Consensus 172 -------a~~~~~~~n~~~G~~avl~~c~~SgfAgvYfEkiLK~s~~s~wi~NiqL~~~g~~f~~l~~~~~d~~~i~~~g 244 (345)
T KOG2234|consen 172 -------AKSESSAQNPFLGLVAVLVACFLSGFAGVYFEKILKGSNVSLWIRNIQLYFFGILFNLLTILLQDGEAINEYG 244 (345)
T ss_pred -------ccCCCcccchhhhHHHHHHHHHHHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhhccccccccCC
Confidence 011233556778999999999999999999999887765 344445555555655555555444433222210
Q ss_pred cCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhc
Q 019712 230 QPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 309 (337)
Q Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~ 309 (337)
--..+-...+.-++....+.++...-+++.+-..=.....+..+++.+.++.++|-++|....+|..+++.++.++...
T Consensus 245 -ff~G~s~~vw~vVl~~a~gGLlvs~v~KyADnIlK~f~~s~aiilt~v~S~~Lf~~~~t~~F~lG~~lVi~Si~lY~~~ 323 (345)
T KOG2234|consen 245 -FFYGYSSIVWLVVLLNAVGGLLVSLVMKYADNILKGFSTSVAIILTTVASIALFDFQLTLYFLLGALLVILSIFLYSLY 323 (345)
T ss_pred -ccccccHHHHHHHHHHhccchhHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHccCCchHHHHHHHHHHHHHHHHhhcC
Confidence 1122333344444444555556666666666655566666888999999999999999999999999999999999855
Q ss_pred cCcc
Q 019712 310 QGKE 313 (337)
Q Consensus 310 ~~~~ 313 (337)
+.++
T Consensus 324 P~~~ 327 (345)
T KOG2234|consen 324 PARD 327 (345)
T ss_pred Cccc
Confidence 5544
No 24
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.66 E-value=6.3e-14 Score=122.58 Aligned_cols=285 Identities=14% Similarity=0.123 Sum_probs=216.9
Q ss_pred hhHHHHHH----HHHHHHHHHhCCCChHHHHH--HHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHH
Q 019712 3 LVEIGEVG----MITLGKAAMSSGMSNFVYVV--YYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQ 76 (337)
Q Consensus 3 ~~~~~wg~----~~~~~k~~~~~~~~~~~~~~--~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~ 76 (337)
.+++.++. +.++.|.+++..--|..+.. ++.+.+.+.+...-.- +--+.++++++..+.++...++ +.++.
T Consensus 15 ~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~--~lv~~~~l~~~~~kk~~P~~~l-f~~~i 91 (314)
T KOG1444|consen 15 LSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRL--GLVNFRPLDLRTAKKWFPVSLL-FVGML 91 (314)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHh--ceeecCCcChHHHHHHccHHHH-HHHHH
Confidence 34455554 44567887765444555555 8888887776652111 1223356788888999999999 49999
Q ss_pred HHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCC
Q 019712 77 IFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSN 156 (337)
Q Consensus 77 ~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~ 156 (337)
..-..+++|.+++..+++.+..|+++++....++|.|++.. .|.++...++|....... +.
T Consensus 92 ~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~------v~~Sv~~m~~~s~~~~~~-d~------------ 152 (314)
T KOG1444|consen 92 FTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNK------VWASVFAMIIGSVAAAFT-DL------------ 152 (314)
T ss_pred HHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhh------HHHHHHHHHHHHHhhccc-cc------------
Confidence 99999999999999999999999999999999999888888 999999999998876321 11
Q ss_pred CCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccCC----CcccccC
Q 019712 157 IQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNP----SAWKLQP 231 (337)
Q Consensus 157 ~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~----~~~~~~~ 231 (337)
.....|..|++...++.+.+.+..|+..+... +...+++|..+.+........+++++-. +.-....
T Consensus 153 --------sf~~~gY~w~~~n~~~~a~~~v~~kk~vd~~~l~~~~lv~yNnl~~L~~l~~~~~~~ge~~~l~~~~~~~~~ 224 (314)
T KOG1444|consen 153 --------SFNLRGYSWALANCLTTAAFVVYVKKSVDSANLNKFGLVFYNNLLSLPPLLILSFITGELDALSLNFDNWSD 224 (314)
T ss_pred --------eecchhHHHHHHHHHHHHHHHHHHHHhhccccccceeEEeehhHHHHHHHHHHHHHhcchHHHHhhcccccc
Confidence 11224999999999999999999998765544 6778899999999988887776665311 1111122
Q ss_pred cchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 232 GIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
...+..+...++++.++.| +...+.+..++...++++......+.+...++.|++.++...+|..+-++|...+++.+.
T Consensus 225 ~~~~~~~~lScv~gf~isy-~s~~ct~~~SAtT~tivG~~n~l~t~l~~ll~~d~~~~~~n~~gll~~~~ggv~Y~~~~~ 303 (314)
T KOG1444|consen 225 SSVLVVMLLSCVMGFGISY-TSFLCTRVNSATTTTIVGAKNKLLTYLGGLLFGDKPFTFLNVIGLLVGFFGGVLYSYATF 303 (314)
T ss_pred hhHHHHHHHHHHHHHHHHH-HHHHHHhhccccceeehhhhhhHHHHHHHHhcCCceechhhhHHHHHHhhhhhHHhhhhh
Confidence 3446666666766655555 455889999999999999888999999999999999999999999999999999998876
Q ss_pred ccccccc
Q 019712 312 KESNMTT 318 (337)
Q Consensus 312 ~~~~~~~ 318 (337)
++++.++
T Consensus 304 ~~k~~~~ 310 (314)
T KOG1444|consen 304 RKKKQPP 310 (314)
T ss_pred hhccCCC
Confidence 6554443
No 25
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.66 E-value=1.2e-15 Score=114.95 Aligned_cols=128 Identities=16% Similarity=0.183 Sum_probs=114.3
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCC-CCccCHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSK-GPVLTFSLLCKFFMLGVLGICLVQIFA 79 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~-~~~~~~~~~~~~~~~g~l~~~~~~~~~ 79 (337)
++++++||...++.|..+ +++||...++.|.....+++.. +... .+.+ ....++|.|.++.+.|+.+ .+++.+|
T Consensus 9 LLsA~fa~L~~iF~KIGl-~~vdp~~At~IRtiVi~~~l~~v~~~~--g~~~~~~~~~~k~~lflilSGla~-glswl~Y 84 (140)
T COG2510 9 LLSALFAGLTPIFAKIGL-EGVDPDFATTIRTIVILIFLLIVLLVT--GNWQAGGEIGPKSWLFLILSGLAG-GLSWLLY 84 (140)
T ss_pred HHHHHHHHHHHHHHHHhc-cccCccHHHHHHHHHHHHHHHHHHHhc--CceecccccCcceehhhhHHHHHH-HHHHHHH
Confidence 578999999999999998 8999999999999999998888 5544 2222 1235778899999999887 9999999
Q ss_pred HHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 80 ITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 80 ~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
|.|++...++....+..++|+++.+++++++|||++.. +|+|+.+..+|++++.
T Consensus 85 f~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~------~~iG~~LI~~Gailvs 138 (140)
T COG2510 85 FRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLP------TWIGIVLIVIGAILVS 138 (140)
T ss_pred HHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHH------HHHHHHHHHhCeeeEe
Confidence 99999999999999999999999999999999999999 9999999999999874
No 26
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=99.65 E-value=1.8e-14 Score=125.75 Aligned_cols=229 Identities=15% Similarity=0.172 Sum_probs=172.7
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhh
Q 019712 57 TFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAF 136 (337)
Q Consensus 57 ~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 136 (337)
++|+...+.+.+++ +.+.+.+.+.++++++++..+++.++..+++++++++++|+|++.+ ||.++.+..+|+.
T Consensus 13 ~~~~~~~~~vPA~l-Y~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~------qW~aL~lL~~Gv~ 85 (244)
T PF04142_consen 13 SPKDTLKLAVPALL-YAIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRR------QWLALFLLVAGVV 85 (244)
T ss_pred hHHHHHHHHHHHHH-HHHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchh------hHHHHHHHHHHHh
Confidence 46677888899999 5999999999999999999999999999999999999999999999 9999999999999
Q ss_pred eeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHH
Q 019712 137 IVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAV 215 (337)
Q Consensus 137 li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~ 215 (337)
++........+.. +.....++....+...|.++.++++++.++..++..+..|+.. +...........+.++.++
T Consensus 86 lv~~~~~~~~~~~----~~~~~~~~~~~~~~~~G~~~vl~~~~~S~~agVy~E~~lK~~~~s~~~~N~qL~~~gi~~~~~ 161 (244)
T PF04142_consen 86 LVQLSSSQSSDNS----SSSSVHHDASNQNPLLGLLAVLAAAFLSGFAGVYFEKLLKRSNVSLWIQNMQLYLFGILFNLL 161 (244)
T ss_pred eeecCCccccccc----cccccccccccchhHhHHHHHHHHHHHHHHHHHHHHHHhcccchhHHHHHHHHHHHHHHHHHH
Confidence 9854322211100 0001111223455678999999999999999999999988875 4555566666666666666
Q ss_pred HHHhhccCC-CcccccCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHH
Q 019712 216 VSIIVERNP-SAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLI 294 (337)
Q Consensus 216 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~ 294 (337)
...+.+.+. .+.. ....+-...+.-++...++.++....+|+.+...=+.....+.+++.+.+++++|.++|....+
T Consensus 162 ~~~~~~~~~~~~~g--~f~G~~~~~~~~i~~~a~gGllva~v~KyadnI~K~fa~a~siv~t~~~s~~lf~~~~s~~f~l 239 (244)
T PF04142_consen 162 ALLLSDGSAISESG--FFHGYSWWVWIVIFLQAIGGLLVAFVLKYADNIVKGFATAVSIVLTAVLSVLLFGFPPSLSFLL 239 (244)
T ss_pred HHhcccccccccCC--chhhcchHHHHHHHHHHHhhHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHhh
Confidence 554433221 1111 1122222334444555667777888899999988889999999999999999999999999999
Q ss_pred HHHH
Q 019712 295 GTVV 298 (337)
Q Consensus 295 G~~l 298 (337)
|..+
T Consensus 240 g~~~ 243 (244)
T PF04142_consen 240 GAAL 243 (244)
T ss_pred heec
Confidence 9865
No 27
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=99.61 E-value=2.1e-13 Score=117.79 Aligned_cols=254 Identities=13% Similarity=0.139 Sum_probs=190.3
Q ss_pred hHHHHHHHHHHHHHHHHH-HHHHhhc-cCCCCccCHHHH-HHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHH
Q 019712 25 NFVYVVYYNALGTFILLH-YFIYNTY-RSKGPVLTFSLL-CKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGI 101 (337)
Q Consensus 25 ~~~~~~~r~~~~~i~l~~-~~~~~~~-~~~~~~~~~~~~-~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~ 101 (337)
|..++.++.++-..+... ...++.. ++.+-..++++. +++...|+.+ ++...+.+++++|++.+..++..+..++|
T Consensus 45 PLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtalat-a~DIGLSN~sl~yVtlSlYTM~KSSsi~F 123 (349)
T KOG1443|consen 45 PLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTALAT-ALDIGLSNWSLEYVTLSLYTMTKSSSILF 123 (349)
T ss_pred chHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhhhh-hcccccccceeeeeeeeeeeeccccHHHH
Confidence 888889988887777666 4333111 111223445444 4556777776 99999999999999999999999999999
Q ss_pred HHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHH
Q 019712 102 TFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSS 181 (337)
Q Consensus 102 ~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~ 181 (337)
+.+++.+|.-||.++. -..-+.+...|+.+++. ++.+ -...|..+..++.++.
T Consensus 124 IllFs~if~lEk~~w~------L~l~v~lI~~Glflft~-KsTq--------------------f~i~Gf~lv~~aS~~s 176 (349)
T KOG1443|consen 124 ILLFSLIFKLEKFRWA------LVLIVLLIAVGLFLFTY-KSTQ--------------------FNIEGFFLVLAASLLS 176 (349)
T ss_pred HHHHHHHHHhHHHHHH------HHHHHHHHhhheeEEEe-cccc--------------------eeehhHHHHHHHHHhh
Confidence 9999999999999999 88888888889888853 3332 2346999999999998
Q ss_pred HHHHHHHHHHhhhCC----ChhHHHHHHHHHHHHHHHHHHHhhccCCC-----cccccCcc-hHHHHHHHHHHHHHHHHH
Q 019712 182 ATWKIFQAAVLKEYP----DKINLVFFSCFFGTIQCAVVSIIVERNPS-----AWKLQPGI-QRTAVIYAAIVGTVIRSS 251 (337)
Q Consensus 182 a~~~i~~k~~~~~~~----~~~~~~~~~~~~~~i~~~~~~~~~~~~~~-----~~~~~~~~-~~~~~~~~~~~~~~~~~~ 251 (337)
++...+.+...++.+ +|...++.......+.++|..+..|.... .+...+.. .+..+..+++ +..+++.
T Consensus 177 GlRW~~tQ~ll~~~~~~~~~P~~ti~~l~p~M~~~Ll~~~l~fEG~~~~~~s~~f~~~d~~~~~rv~g~i~l-~g~laF~ 255 (349)
T KOG1443|consen 177 GLRWAFTQMLLRNQPSAKRNPIDTIFHLQPWMSIGLLPLSLLFEGLHLITSSSIFRFQDTGLILRVIGLISL-GGLLAFL 255 (349)
T ss_pred hhhHHHHHHHHhcCccccCCCeeeHHHhhhHHHHHHHHHHHHHcccccchhhhHHHhcCccHHHHHHHHHHH-HHHHHHH
Confidence 888877777766654 68888888888888888888887775321 22222222 2222333332 2233332
Q ss_pred ---HHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 252 ---IIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 252 ---~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
+-+.-+.+++..+.++.+...-+-+.+++..+.+|.++...|.|..+.+.|+.+..
T Consensus 256 l~~sEflLl~~Ts~ltlSIaGI~Kel~tl~la~ii~~d~ls~lN~~Gl~i~~agi~~~~ 314 (349)
T KOG1443|consen 256 LEFSEFLLLSRTSSLTLSIAGIVKEVCTLLLAIIILKDQLSLLNWLGLAICLAGILLHR 314 (349)
T ss_pred HHHHHHheeeeccceeeeHHHHHHHHHHHHHHHHHhhcchhhhHHHHHHHHHHHHHHhc
Confidence 23344678999999999999999999999999999999999999999999998883
No 28
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=99.60 E-value=1.7e-15 Score=127.34 Aligned_cols=268 Identities=17% Similarity=0.168 Sum_probs=200.3
Q ss_pred HHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhccc
Q 019712 9 VGMITLGKAAMSSGM-SNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYS 86 (337)
Q Consensus 9 g~~~~~~k~~~~~~~-~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~ 86 (337)
+..+.-..++ ..++ .|...++..+..-+++..+ +.+| + +. -+-.|++++++++.- +-++.+...|.+|+
T Consensus 32 ~~a~tss~la-~k~iN~Pt~QtFl~Y~LLalVY~~~~~fR---~-~~---~~~~~~hYilla~~D-VEaNy~vV~AyQyT 102 (336)
T KOG2766|consen 32 STAFTSSELA-RKGINAPTSQTFLNYVLLALVYGPIMLFR---R-KY---IKAKWRHYILLAFVD-VEANYFVVKAYQYT 102 (336)
T ss_pred cchhhhHHHH-hccCCCccHHHHHHHHHHHHHHhhHHHhh---h-HH---HHHHHHHhhheeEEe-ecccEEEeeehhhc
Confidence 3334444444 3444 3778889999999999888 6655 2 21 233567788899886 77888899999999
Q ss_pred CcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcch
Q 019712 87 SPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSN 166 (337)
Q Consensus 87 ~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (337)
+.....++-+-..+.+.+++|+++|.|.++. ++.|+++++.|++.++..+=.. ..+.++.+
T Consensus 103 smtSi~lLDcwaip~v~~lsw~fLktrYrlm------ki~gV~iCi~GvvmvV~sDV~a-------------gd~aggsn 163 (336)
T KOG2766|consen 103 SMTSIMLLDCWAIPCVLVLSWFFLKTRYRLM------KISGVVICIVGVVMVVFSDVHA-------------GDRAGGSN 163 (336)
T ss_pred chHHHHHHHHhhhHHHHHHHHHHHHHHHhhh------eeeeEEeEecceEEEEEeeecc-------------ccccCCCC
Confidence 9999999999888888999999999999999 9999999999999986532211 12345667
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHH-HHHH
Q 019712 167 WALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYA-AIVG 245 (337)
Q Consensus 167 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 245 (337)
+.+|+++.++++-+||..++....+.|+. |..+.+....++++++..+..+ .+.... ...++. +....++ ..++
T Consensus 164 p~~GD~lvi~GATlYaVSNv~EEflvkn~-d~~elm~~lgLfGaIIsaIQ~i-~~~~~~-~tl~w~--~~i~~yl~f~L~ 238 (336)
T KOG2766|consen 164 PVKGDFLVIAGATLYAVSNVSEEFLVKNA-DRVELMGFLGLFGAIISAIQFI-FERHHV-STLHWD--SAIFLYLRFALT 238 (336)
T ss_pred CccCcEEEEecceeeeeccccHHHHHhcC-cHHHHHHHHHHHHHHHHHHHHh-hhccce-eeEeeh--HHHHHHHHHHHH
Confidence 78999999999999999999999998888 6899999999999999988744 443321 111111 2222222 2233
Q ss_pred HHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 246 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
.++-|.+.-.-++..+++-..+-....-.+++++ -.||-+++|...+..+.++.|.+++..+++
T Consensus 239 MFllYsl~pil~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wLY~laF~~i~~GliiYs~re~ 302 (336)
T KOG2766|consen 239 MFLLYSLAPILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWLYFLAFATIATGLIIYSTREK 302 (336)
T ss_pred HHHHHHhhHHheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhhhHHHHHHHHHhhEEeecccc
Confidence 3444555556677888888888888888888888 667778999999999999999988854433
No 29
>COG2510 Predicted membrane protein [Function unknown]
Probab=99.58 E-value=6.4e-14 Score=105.64 Aligned_cols=136 Identities=18% Similarity=0.133 Sum_probs=116.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHH
Q 019712 170 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 249 (337)
Q Consensus 170 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (337)
..++++++++++++..++.|-..++. ||......+.....+.+..+.+..++ .+.-...+.+.|..++..|+ .+.++
T Consensus 4 ~~~~ALLsA~fa~L~~iF~KIGl~~v-dp~~At~IRtiVi~~~l~~v~~~~g~-~~~~~~~~~k~~lflilSGl-a~gls 80 (140)
T COG2510 4 AIIYALLSALFAGLTPIFAKIGLEGV-DPDFATTIRTIVILIFLLIVLLVTGN-WQAGGEIGPKSWLFLILSGL-AGGLS 80 (140)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcccc-CccHHHHHHHHHHHHHHHHHHHhcCc-eecccccCcceehhhhHHHH-HHHHH
Confidence 56889999999999999999988888 79999999999888887776664432 22221225677888888885 67899
Q ss_pred HHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 250 SSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 250 ~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
..+|++++++..++.+..+..++|+++.+++++++||++|..+|+|+.+|.+|..+..+
T Consensus 81 wl~Yf~ALk~G~as~VvPldk~svvl~~lls~lfL~E~ls~~~~iG~~LI~~Gailvs~ 139 (140)
T COG2510 81 WLLYFRALKKGKASRVVPLDKTSVVLAVLLSILFLGERLSLPTWIGIVLIVIGAILVSL 139 (140)
T ss_pred HHHHHHHHhcCCcceEEEcccccHHHHHHHHHHHhcCCCCHHHHHHHHHHHhCeeeEec
Confidence 99999999999999999999999999999999999999999999999999999876643
No 30
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=99.58 E-value=1e-13 Score=118.08 Aligned_cols=265 Identities=11% Similarity=0.128 Sum_probs=185.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcc-cCcchhhhhcchhHHHHHH
Q 019712 26 FVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKY-SSPTLASAMGNLIPGITFL 104 (337)
Q Consensus 26 ~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~-~~~~~~~~i~~~~pv~~~l 104 (337)
..+++.++++-+.--++. ...-...+++++.|++...... +...+.+-++|+++ ++...-.++.+-.++.+++
T Consensus 34 NLITFaqFlFia~eGlif--~skf~~~k~kiplk~Y~i~V~m----FF~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~ 107 (330)
T KOG1583|consen 34 NLITFAQFLFIATEGLIF--TSKFFTVKPKIPLKDYAITVAM----FFIVNVTNNYALKFNIPMPLHIIFRSGSLLANMI 107 (330)
T ss_pred eehHHHHHHHHHHhceee--eccccccCCCCchhhhheehhe----eeeeeeeccceeeecccceEEEEEecCcHHHHHH
Confidence 456677766555443331 1001122356666655433322 46677888999998 6788888888999999999
Q ss_pred HHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHH
Q 019712 105 LAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATW 184 (337)
Q Consensus 105 l~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~ 184 (337)
++++++|+|.+.+ |+.++++..+|+++.+..++.+... ..+.-++++.......+..|+.+...+.+..|..
T Consensus 108 ~g~il~~k~Ys~~------Qy~Sv~~iTiGiiIcTl~s~~d~~~--~~~~l~~~~~~~~~~~w~iGi~lL~~al~~sa~m 179 (330)
T KOG1583|consen 108 LGWILLGKRYSLR------QYSSVLMITIGIIICTLFSSKDGRS--KLSGLDSGSAQSDFFWWLIGIALLVFALLLSAYM 179 (330)
T ss_pred HHHHhccceeehh------hhhhHHhhhhhheeEEeecCcchhh--hhcccccCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999 9999999999999988765544332 2233334444455667778999999999999999
Q ss_pred HHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHH--------hhccCCCccc---ccCcchHHHHHHHHHHHHHHHHHH
Q 019712 185 KIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSI--------IVERNPSAWK---LQPGIQRTAVIYAAIVGTVIRSSI 252 (337)
Q Consensus 185 ~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 252 (337)
.+.+....+++. ++.+..+|....+....+...- ....+....+ ..-+..|..++ +..+.+..
T Consensus 180 giyqE~~Y~kyGKh~~EalFytH~LsLP~Flf~~~div~~~~~~~~se~~~~p~~g~~vP~~~~yLl-----~n~L~Qy~ 254 (330)
T KOG1583|consen 180 GIYQETTYQKYGKHWKEALFYTHFLSLPLFLFMGDDIVSHWRLAFKSESYLIPLLGFKVPSMWVYLL-----FNVLTQYF 254 (330)
T ss_pred HHHHHHHHHHhcCChHHHHHHHHHhccchHHHhcchHHHHHHHHhcCcceeccccCccccHHHHHHH-----HHHHHHHH
Confidence 999999988887 7899999999766554432211 0000100011 11123333332 33344433
Q ss_pred HHHHh----hccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhc
Q 019712 253 IAWCL----QKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWA 309 (337)
Q Consensus 253 ~~~~l----~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~ 309 (337)
-.++. .+.++.+++++..+.-.++++++.+.|+.++|++-|+|.+++..|..++.-.
T Consensus 255 CikgVy~L~te~~sLTVTlvltlRKFvSLl~SiiyF~Npft~~h~lGa~lVF~Gt~~fa~~ 315 (330)
T KOG1583|consen 255 CIKGVYILTTETSSLTVTLVLTLRKFVSLLFSIIYFENPFTPWHWLGAALVFFGTLLFANV 315 (330)
T ss_pred HHHhhhhhhceecceEEEEeeeHHHHHHHhheeeEecCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 33443 4567889999999999999999999999999999999999999998887743
No 31
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.54 E-value=2e-14 Score=112.75 Aligned_cols=123 Identities=21% Similarity=0.298 Sum_probs=109.1
Q ss_pred HHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhc
Q 019712 6 IGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIK 84 (337)
Q Consensus 6 ~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~ 84 (337)
++||...++.|... ++.||...+++|+..+.+ +++ .... ++++....+++++......|.++...++.+++.|++
T Consensus 1 ~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLL-KKISPLSITFWRFLIAGI-LLILLLIL--GRKPFKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHh-ccCCHHHHHHHHHHHHHH-HHHHHHhh--ccccccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 57999999999997 779999999999999998 555 4444 333345667788888999998866999999999999
Q ss_pred ccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 85 YSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 85 ~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
+.+++.++++.++.|+++.+++++++||+++++ +++|+.+++.|++++
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~------~~~g~~l~~~g~~l~ 124 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWR------QIIGIILIIIGVVLI 124 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999 999999999999875
No 32
>PF00892 EamA: EamA-like transporter family; InterPro: IPR000620 This domain is found in proteins including the Erwinia chrysanthemi PecM protein, which is involved in pectinase, cellulase and blue pigment regulation; and the Salmonella typhimurium PagO protein, the function of which is unknown. Many members of this family are classed as drug/metabolite transporters and have no known function. They are predicted to be integral membrane proteins and many of the proteins contain two copies of this domain [].; GO: 0016020 membrane
Probab=99.47 E-value=2.3e-13 Score=106.63 Aligned_cols=125 Identities=22% Similarity=0.458 Sum_probs=107.4
Q ss_pred HHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 019712 179 FSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQ 258 (337)
Q Consensus 179 ~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (337)
++||.+.+..|+..++. |+....+++...+.+ .++.....+... ....+...+....+.+++++.+++.+++++++
T Consensus 1 ~~~a~~~~~~k~~~~~~-~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ 76 (126)
T PF00892_consen 1 FSWAIYSVFSKKLLKKI-SPLSITFWRFLIAGI-LLILLLILGRKP--FKNLSPRQWLWLLFLGLLGTALAYLLYFYALK 76 (126)
T ss_pred ceeeeHHHHHHHHhccC-CHHHHHHHHHHHHHH-HHHHHHhhcccc--ccCCChhhhhhhhHhhccceehHHHHHHHHHH
Confidence 47899999999999888 699999999999998 655555444332 22235567777888888878899999999999
Q ss_pred ccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 259 KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 259 ~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
+.+++.++.+.+++|+++.++++++++|++++.+++|+++++.|+++..
T Consensus 77 ~~~~~~~~~~~~~~pv~~~i~~~~~~~e~~~~~~~~g~~l~~~g~~l~~ 125 (126)
T PF00892_consen 77 YISASIVSILQYLSPVFAAILGWLFLGERPSWRQIIGIILIIIGVVLIS 125 (126)
T ss_pred hcchhHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999998764
No 33
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=99.46 E-value=1.5e-12 Score=111.22 Aligned_cols=272 Identities=17% Similarity=0.159 Sum_probs=189.9
Q ss_pred HHHHHHHHHHh---CCC----ChHHHHHHHHHHHHHHHHH-HHHHhhccCCCC---------------ccCHHHHHHHHH
Q 019712 10 GMITLGKAAMS---SGM----SNFVYVVYYNALGTFILLH-YFIYNTYRSKGP---------------VLTFSLLCKFFM 66 (337)
Q Consensus 10 ~~~~~~k~~~~---~~~----~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~---------------~~~~~~~~~~~~ 66 (337)
.+.+++|++=+ ++- +|+..+...++.-+.++.. .+.+ .|...+ +.++ ...+.
T Consensus 17 ~Ntl~aKwadsi~~eg~pgfqhpvlqal~mFlGEflCl~vf~lir--~~sn~~g~~s~~~~ilsq~~~pf~p---~lfl~ 91 (372)
T KOG3912|consen 17 FNTLVAKWADSIQAEGSPGFQHPVLQALLMFLGEFLCLAVFKLIR--LRSNGQGVSSDLDSILSQDSSPFNP---VLFLP 91 (372)
T ss_pred HHHHHHHHHHhhhhhCCCccccHHHHHHHHHHHHHHHHHHHHHHH--HhhcCCCcccccccccccccCCCCc---ceecC
Confidence 35667777521 122 4777777777777777776 5554 222111 1222 22233
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCC
Q 019712 67 LGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPL 146 (337)
Q Consensus 67 ~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~ 146 (337)
-.++- ..+..+.|.++.+++++..+++.....+|+.+++..+++++++.+ ||+|+....+|++++-.. +...
T Consensus 92 Pal~D-i~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~------qWl~i~fv~lGlviVg~~-d~~~ 163 (372)
T KOG3912|consen 92 PALCD-IAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGR------QWLGILFVSLGLVIVGSL-DVHL 163 (372)
T ss_pred hHHHH-HhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchh------hHHHHHHHHhhhheeeee-eccc
Confidence 55564 778899999999999999999999999999999999999999999 999999999999987322 1111
Q ss_pred CCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHH----hhc
Q 019712 147 LGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSI----IVE 221 (337)
Q Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~----~~~ 221 (337)
. .++..+..+.+.|+++.+.+-+.-|...+...|..+++. +|.....|..+++.++....+. +..
T Consensus 164 ~----------~~p~~d~s~iitGdllIiiaqiivaiQ~v~Eek~l~~~nV~pl~avg~eGlfG~v~~slL~i~m~yi~~ 233 (372)
T KOG3912|consen 164 V----------TDPYTDYSSIITGDLLIIIAQIIVAIQMVCEEKQLKKSNVAPLQAVGWEGLFGLVILSLLAIPMYYIPS 233 (372)
T ss_pred c----------cCCccccccchhhhHHHHHHHHHHHHHHHHHHhhhhhccCCHHHHhhhhhhHHHHHHHHHHHHHhheec
Confidence 0 112234456678999999999999999999887777766 8999999999999665443332 211
Q ss_pred cCC------Cccccc-------CcchHHHHHHHHHHHHHHHHHHHH----HHhhccCceeeeeccchhHHHHHHHHHHHh
Q 019712 222 RNP------SAWKLQ-------PGIQRTAVIYAAIVGTVIRSSIIA----WCLQKKGPVFVALFKPLGTAIAVFMAVMFL 284 (337)
Q Consensus 222 ~~~------~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~----~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~ 284 (337)
.+. ..+... .......+...|.. ++..+++ +-.+..++++-.++-.+...+-.+++....
T Consensus 234 ~~sfS~~~~g~~eD~~~~~~~~~e~p~l~val~~~~---vSiAffNfaGlsitk~~SattRmllD~lRt~~IWv~si~m~ 310 (372)
T KOG3912|consen 234 GDSFSCNPRGVLEDWGDAFAALQESPSLAVALIGFT---VSIAFFNFAGLSITKELSATTRMLLDSLRTYVIWVFSIAMG 310 (372)
T ss_pred CCcCcCCCCcchhhHHHHHHHhcCCchhHHHHhhhh---hheeeeeehhhHHHHHhhHHHHHHHHhhhhhhhhHhHHHHH
Confidence 100 001100 00111222333332 2222232 234677888889999999999999999999
Q ss_pred CCCCchhhHHHHHHHHHHHHHHH
Q 019712 285 GETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 285 ~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
.|.++..|+.|..+.+.|+++++
T Consensus 311 ~E~f~llqilGFliLi~Gi~lY~ 333 (372)
T KOG3912|consen 311 WEYFHLLQILGFLILIMGIILYN 333 (372)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999987
No 34
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=99.42 E-value=1.2e-12 Score=108.24 Aligned_cols=277 Identities=14% Similarity=0.155 Sum_probs=196.7
Q ss_pred HHHHHHHh-CCCC-hHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcch
Q 019712 13 TLGKAAMS-SGMS-NFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTL 90 (337)
Q Consensus 13 ~~~k~~~~-~~~~-~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~ 90 (337)
+-.|..++ .+++ .+.+.+++.+.+.+.+....+. | ..+.+.++.+.++...++- +......-.+++|.++..
T Consensus 23 ltNKyVls~~gfnMnflll~vQSlvcvv~l~iLk~l---~--~~~fR~t~aK~WfpiSfLL-v~MIyt~SKsLqyL~vpi 96 (309)
T COG5070 23 LTNKYVLSNLGFNMNFLLLAVQSLVCVVGLLILKFL---R--LVEFRLTKAKKWFPISFLL-VVMIYTSSKSLQYLAVPI 96 (309)
T ss_pred HhhHheecCCCCchhhHHHHHHHHHHHHHHHHHHHH---h--HhheehhhhhhhcCHHHHH-HHHHHhcccceeeeeeeH
Confidence 34455443 2333 4566777877777766652111 1 1112234455666677774 777888899999999999
Q ss_pred hhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHH
Q 019712 91 ASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALG 170 (337)
Q Consensus 91 ~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 170 (337)
.+++.++..+.++.....++|.|++.. ...+..+.++.-+.....+..... -.....+.|
T Consensus 97 YTiFKNltII~iAygEvl~Fgg~vtsl------~l~SFilMvlSS~va~w~D~q~~~--------------~~~~~lN~G 156 (309)
T COG5070 97 YTIFKNLTIILIAYGEVLFFGGRVTSL------ELLSFILMVLSSVVATWGDQQASA--------------FKAQILNPG 156 (309)
T ss_pred HHHhccceeehhHhhHHHHhcCccchh------hHHHHHHHHHHHHHhccchhhHHH--------------HHhcccCCc
Confidence 999999999999999999999999999 888888887777765322111100 111234469
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccC-CCccc-ccCcchHHHHHHHHHHHHH
Q 019712 171 GLLLTVTCFSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERN-PSAWK-LQPGIQRTAVIYAAIVGTV 247 (337)
Q Consensus 171 ~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~ 247 (337)
.+|+...++..+.+....|+..+-.. .....++|.+..+..+++...+++|.- ..... ..+.....++...|+ ++.
T Consensus 157 Y~Wm~~NclssaafVL~mrkri~ltNf~d~dtmfYnNllslPiL~~~s~~~edws~~n~annl~~d~l~am~ISgl-~sv 235 (309)
T COG5070 157 YLWMFTNCLSSAAFVLIMRKRIKLTNFKDFDTMFYNNLLSLPILLSFSFLFEDWSPGNLANNLSVDSLMAMFISGL-CSV 235 (309)
T ss_pred eEEEehhhHhHHHHHHHHHHhhcccccchhhHHHHhhhHHHHHHHHHHHHhccCCcchhhcCCChHHHHHHHHHHH-HHh
Confidence 99999999999999999987644322 467789999999998888877766532 11111 111122334445555 333
Q ss_pred HHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCccccc
Q 019712 248 IRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNM 316 (337)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~~~ 316 (337)
.-..+-.++++.++.+..++++.++-.-..+.|.++++|+.+...+....+-.++..++...+.++++.
T Consensus 236 giSy~saWcvrVtSSTtySMvGALNKlp~alaGlvffdap~nf~si~sillGflsg~iYavaks~k~q~ 304 (309)
T COG5070 236 GISYCSAWCVRVTSSTTYSMVGALNKLPIALAGLVFFDAPVNFLSIFSILLGFLSGAIYAVAKSKKQQN 304 (309)
T ss_pred hhhhccceeEeehhhhHHHHHHHhhhChHHHhhhhhcCCchhHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 334466688999999999999999999999999999999999999999999888888888877665443
No 35
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=99.37 E-value=2e-12 Score=110.07 Aligned_cols=283 Identities=16% Similarity=0.090 Sum_probs=203.1
Q ss_pred HHHHHHHhC---CC-ChHHHHHHHHHHHHHHHHH--HHHHhhc-cCCCC--ccCHHHHHHHHHHHHHHHHHHHHHHHHhh
Q 019712 13 TLGKAAMSS---GM-SNFVYVVYYNALGTFILLH--YFIYNTY-RSKGP--VLTFSLLCKFFMLGVLGICLVQIFAITGI 83 (337)
Q Consensus 13 ~~~k~~~~~---~~-~~~~~~~~r~~~~~i~l~~--~~~~~~~-~~~~~--~~~~~~~~~~~~~g~l~~~~~~~~~~~al 83 (337)
...|+.++. .. .|..+++++.+....+-.. .+.++.. +...+ +++.+..+.+.-+.+. +.+...+-++.+
T Consensus 45 f~nk~llss~~~~Ld~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvV-fi~mI~fnnlcL 123 (347)
T KOG1442|consen 45 FLNKHLLSSLVVILDAPLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVV-FILMISFNNLCL 123 (347)
T ss_pred hhHHHHhhchhhhcCcHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhe-eeeehhccceeh
Confidence 355666532 11 4788888888776655443 2222100 00111 2444555556666666 477778888999
Q ss_pred cccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCC
Q 019712 84 KYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSE 163 (337)
Q Consensus 84 ~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (337)
+|.+++...+=.++..+|+.+++++++|+|-+.. -..+..+.+.|..+=+=.++ ..
T Consensus 124 ~yVgVaFYyvgRsLttvFtVlLtyvllkqkTs~~------~~~~C~lIi~GF~lGvdqE~------------------~~ 179 (347)
T KOG1442|consen 124 KYVGVAFYYVGRSLTTVFTVLLTYVLLKQKTSFF------ALGCCLLIILGFGLGVDQEG------------------ST 179 (347)
T ss_pred hhcceEEEEeccchhhhHHHHhHHhhcccccccc------cceeehhheehheecccccc------------------cc
Confidence 9999999999999999999999999999999999 77777777777665321111 22
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccCCCccc--cc-CcchHHHHH
Q 019712 164 YSNWALGGLLLTVTCFSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWK--LQ-PGIQRTAVI 239 (337)
Q Consensus 164 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~-~~~~~~~~~ 239 (337)
+.-...|.++.+.+.++-|+..+..|+...... .-+...+|.+..+.++.+|...+.+.-...+. .. ....|..+.
T Consensus 180 ~~ls~~GvifGVlaSl~vAlnaiytkk~l~~v~~~iw~lt~ynnv~a~lLflpll~lnge~~~v~~~~~l~a~~Fw~~mt 259 (347)
T KOG1442|consen 180 GTLSWIGVIFGVLASLAVALNAIYTKKVLPPVGDCIWRLTAYNNVNALLLFLPLLILNGEFQAVVGFPHLPAIKFWILMT 259 (347)
T ss_pred CccchhhhHHHHHHHHHHHHHHHhhheecccccCeehhhHHHHHHHHHHHHHHHHHHcchHHHHcCcccchHHHHHHHHH
Confidence 344568999999999999999999997654443 35788899999999999998886543222221 22 335566666
Q ss_pred HHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcccccccC
Q 019712 240 YAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNMTTG 319 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~~~~~~ 319 (337)
..|+++..+++.- ..=+|.++|.+-.+-....-....++++.+++|.-+...|-|-++++.|...+.+.|.+|.++++.
T Consensus 260 LsglfgF~mgyvT-g~QIK~TSplThnISgTAka~aQTvlAv~~y~E~ks~lwwtsn~~vLvgs~~YT~vk~~em~~~~~ 338 (347)
T KOG1442|consen 260 LSGLFGFAMGYVT-GWQIKVTSPLTHNISGTAKAAAQTVLAVAYYSETKSGLWWTSNIVVLVGSLAYTLVKEHEMRKASA 338 (347)
T ss_pred HHHHHHHHhhhee-eEEEEecccceeeecHhHHHHHHHHHHHHHHHHHhhhheeeeeEEEEehhHHHHHHHHHHHHhhcc
Confidence 6666554444322 233688999999999999999999999999999999999999999999999999988776655544
Q ss_pred CC
Q 019712 320 NV 321 (337)
Q Consensus 320 ~~ 321 (337)
++
T Consensus 339 ~~ 340 (347)
T KOG1442|consen 339 QR 340 (347)
T ss_pred CC
Confidence 33
No 36
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=99.33 E-value=9.7e-10 Score=95.87 Aligned_cols=248 Identities=17% Similarity=0.142 Sum_probs=175.3
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccC--HHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcc-hhH
Q 019712 23 MSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLT--FSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGN-LIP 99 (337)
Q Consensus 23 ~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~--~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~-~~p 99 (337)
-+|.+-...--.-+.++-+..... .+ |..+ .+.+..-++.|++. ..++...+.|.++..++.+..+.. ++-
T Consensus 10 G~~~~Q~lG~t~Gali~alv~~~~--~~---p~~~~~~~~~~~~~lsG~~W-~iGq~~qf~s~~~~GVS~tmPiStg~QL 83 (269)
T PF06800_consen 10 GKPANQILGTTIGALIFALVVFLF--RQ---PAFSMSGTSFIVAFLSGAFW-AIGQIGQFKSFKKIGVSKTMPISTGLQL 83 (269)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHH--hC---CCcchHHHHHHHHHHHHHHH-HHHHHHHHHHHHHhcceeeeccchhHHH
Confidence 355555555333333333334333 22 2333 47788888899996 999999999999999999999975 788
Q ss_pred HHHHHHHHHHhhccccccccCccchhh----HHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHH
Q 019712 100 GITFLLAVFFRMEKVAIRSRSSQAKIL----GTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLT 175 (337)
Q Consensus 100 v~~~ll~~~~~~e~~~~~~~~~~~~~~----g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l 175 (337)
+.+.+++.++++|--+.. +++ ++++.++|+.+.+..+++.. ..++..+...|+...+
T Consensus 84 vg~sl~gv~~fgEW~~~~------~~~~G~~Al~liiiGv~lts~~~~~~~-------------~~~~~~~~~kgi~~Ll 144 (269)
T PF06800_consen 84 VGTSLIGVLFFGEWTTTT------QKIIGFLALVLIIIGVILTSYQDKKSD-------------KSSSKSNMKKGILALL 144 (269)
T ss_pred HHHHHHHHhhcCCCCCcc------hHHHHHHHHHHHHHHHHHhcccccccc-------------ccccccchhhHHHHHH
Confidence 889999999999988877 543 67788888887654333221 1122445567999999
Q ss_pred HHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHH
Q 019712 176 VTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAW 255 (337)
Q Consensus 176 ~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (337)
++++.|..|.+..|. .+. |+.....-+.+...+...........+ .+ ....+.. +..|++- .++..++..
T Consensus 145 ~stigy~~Y~~~~~~--~~~-~~~~~~lPqaiGm~i~a~i~~~~~~~~--~~---~k~~~~n-il~G~~w-~ignl~~~i 214 (269)
T PF06800_consen 145 ISTIGYWIYSVIPKA--FHV-SGWSAFLPQAIGMLIGAFIFNLFSKKP--FF---EKKSWKN-ILTGLIW-GIGNLFYLI 214 (269)
T ss_pred HHHHHHHHHHHHHHh--cCC-ChhHhHHHHHHHHHHHHHHHhhccccc--cc---ccchHHh-hHHHHHH-HHHHHHHHH
Confidence 999999999999776 344 677777777655555544444433111 11 1122333 3344433 478888999
Q ss_pred HhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhh----HHHHHHHHHHHHH
Q 019712 256 CLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGS----LIGTVVIAFGFYA 305 (337)
Q Consensus 256 ~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~----~~G~~lii~g~~~ 305 (337)
+.++.+.+..=.+..+.++++.+.+.+++||+=+..+ ++|.++++.|.++
T Consensus 215 s~~~~G~a~af~lSQ~~vvIStlgGI~il~E~Kt~ke~~~~~~G~~Liv~G~il 268 (269)
T PF06800_consen 215 SAQKNGVATAFTLSQLGVVISTLGGIFILKEKKTKKEMIYTLIGLILIVIGAIL 268 (269)
T ss_pred hHHhccchhhhhHHhHHHHHHHhhhheEEEecCchhhHHHHHHHHHHHHHhhhc
Confidence 9999999999999999999999999999999988775 4678888777653
No 37
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=99.31 E-value=1.2e-11 Score=105.12 Aligned_cols=261 Identities=11% Similarity=0.158 Sum_probs=197.0
Q ss_pred CCCh--HHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchh
Q 019712 22 GMSN--FVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLI 98 (337)
Q Consensus 22 ~~~~--~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~ 98 (337)
++.| +.+++.+++.-..+-+. +... +. +++..++ +.+..++.+. .+...+..-++.|++-....++.++.
T Consensus 70 gfkp~GWylTlvQf~~Ysg~glie~~~~--~~-k~r~iP~---rtY~~la~~t-~gtmGLsn~SlgYLNYPtQviFKccK 142 (367)
T KOG1582|consen 70 GFKPFGWYLTLVQFLVYSGFGLIELQLI--QT-KRRVIPW---RTYVILAFLT-VGTMGLSNGSLGYLNYPTQVIFKCCK 142 (367)
T ss_pred cCcccchHHHHHHHHHHHhhhheEEEee--cc-cceecch---hHhhhhHhhh-hhccccCcCccccccCcHHHHHHhhh
Confidence 5553 57788888777666565 4333 22 2223334 5666677775 77888899999999988888999988
Q ss_pred HHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHH
Q 019712 99 PGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTC 178 (337)
Q Consensus 99 pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~ 178 (337)
-+-+++.+.+.-+.|.+.. +.++..+..+|.++.++.++. .+.+....|..+.-.|.
T Consensus 143 liPVmiggifIqGkRY~v~------d~~aA~lm~lGli~FTLADs~-----------------~sPNF~~~Gv~mIsgAL 199 (367)
T KOG1582|consen 143 LIPVMIGGIFIQGKRYGVH------DYIAAMLMSLGLIWFTLADSQ-----------------TSPNFNLIGVMMISGAL 199 (367)
T ss_pred hhhhhheeeeeccccccHH------HHHHHHHHHHHHHhhhhcccc-----------------cCCCcceeeHHHHHHHH
Confidence 8888999999999999999 999999999999998765443 22334458999999999
Q ss_pred HHHHHHHHHHHHHhhhCC-ChhHHHHHHHHHHHHHHHHHHHhhccCCCcccc---cCcchHHHHHHHHHHHHHHHHHHHH
Q 019712 179 FSSATWKIFQAAVLKEYP-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKL---QPGIQRTAVIYAAIVGTVIRSSIIA 254 (337)
Q Consensus 179 ~~~a~~~i~~k~~~~~~~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~ 254 (337)
++-|+-.-+|.+..+.++ +..++.++....+.+..+......+.-...|+. ++.+......+.+. .+.++...-.
T Consensus 200 l~DA~iGNvQEk~m~~~~~ss~EmvfySy~iG~vflf~~mvlTge~f~a~~fcaehp~~tyGy~~~~s~-~gylG~~~VL 278 (367)
T KOG1582|consen 200 LADAVIGNVQEKAMKMNPASSSEMVFYSYGIGFVFLFAPMVLTGELFSAWTFCAEHPVRTYGYAFLFSL-AGYLGIVFVL 278 (367)
T ss_pred HHHHHhhHHHHHHHhhCCCCcceEEEeeecccHHHHHHHHHhcccchhhhHHHHhCcHhHHHHHHHHHH-HhHhhHHHHH
Confidence 999998889988888887 667888898888988877766655543334431 22223333333333 3345665666
Q ss_pred HHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 255 WCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 255 ~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
.-++..++..++.+....-.+++++++++|..++|.+..-|..+++.|+++-.+.++.+
T Consensus 279 alI~~fGA~~aatvTTaRKavTi~lSfllFsKPfT~qy~~~gllv~lgI~Ln~ysk~nk 337 (367)
T KOG1582|consen 279 ALIKLFGALIAATVTTARKAVTILLSFLLFSKPFTEQYVWSGLLVVLGIYLNMYSKRNK 337 (367)
T ss_pred HHHHHhchhHHHHHHHhHhHHHHHHHHHHHcCchHHHHhhhhHHHHHHHHhhcccCCCC
Confidence 66788899999999999999999999999999999999999999999999988877433
No 38
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=99.29 E-value=5.1e-12 Score=97.46 Aligned_cols=104 Identities=20% Similarity=0.325 Sum_probs=85.2
Q ss_pred HHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHH
Q 019712 30 VYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVF 108 (337)
Q Consensus 30 ~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~ 108 (337)
.+|+..+.+++.. ...+++.++..+..+++.+.+....|.++...++.++++|+++.+ +.++++.++.|+++.+++++
T Consensus 2 a~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~-~~v~~i~~~~pi~~~ll~~~ 80 (113)
T PF13536_consen 2 AFRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAP-ALVAAIFSLSPIFTALLSWL 80 (113)
T ss_pred HHHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCc-HHHHHHHHHHHHHHHHHHHH
Confidence 5788899998888 655521111123334456677778888886699999999999999 58889999999999999999
Q ss_pred HhhccccccccCccchhhHHHHHhhhhheeee
Q 019712 109 FRMEKVAIRSRSSQAKILGTVVSIAGAFIVSL 140 (337)
Q Consensus 109 ~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 140 (337)
++|||++++ ++.++.++++|++++..
T Consensus 81 ~~~er~~~~------~~~a~~l~~~Gv~li~~ 106 (113)
T PF13536_consen 81 FFKERLSPR------RWLAILLILIGVILIAW 106 (113)
T ss_pred HhcCCCCHH------HHHHHHHHHHHHHHHhh
Confidence 999999999 99999999999999853
No 39
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=99.23 E-value=1.4e-10 Score=94.39 Aligned_cols=138 Identities=14% Similarity=0.232 Sum_probs=112.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhC-----C-ChhHHHHHHHHHHHHHHHHHHHhhccCCCcccc--------c-Ccch
Q 019712 170 GGLLLTVTCFSSATWKIFQAAVLKEY-----P-DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKL--------Q-PGIQ 234 (337)
Q Consensus 170 G~~~~l~a~~~~a~~~i~~k~~~~~~-----~-~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~--------~-~~~~ 234 (337)
|.++++.+.++.|++.+..|+..++. . ++.++..+....+.+..+|..+..|........ . +...
T Consensus 1 G~~~~l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~ 80 (153)
T PF03151_consen 1 GFILALASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLLEGPQLSSFFSEIFGEELSSDPNF 80 (153)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHHhhhhhhhHHHHhhhhhhcchHHH
Confidence 67899999999999999999987772 3 899999999999999999998877654311110 0 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 235 RTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
+..++..|+.. ..-....+..+++++|...++.+.++.+..++++++++||++|..++.|.++.++|.+.++|
T Consensus 81 ~~~~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~~~~G~~l~~~G~~~Ysy 153 (153)
T PF03151_consen 81 IFLLILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPLQIIGIVLALVGVLLYSY 153 (153)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHHHHHHHHHHHHHHheeeC
Confidence 44455555533 46667777889999999999999999999999999999999999999999999999988764
No 40
>TIGR00950 2A78 Carboxylate/Amino Acid/Amine Transporter.
Probab=99.19 E-value=4e-10 Score=99.93 Aligned_cols=124 Identities=19% Similarity=0.241 Sum_probs=104.7
Q ss_pred chhHHHHHHHHHHHHHHHhCCCCh--HHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSN--FVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIF 78 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~--~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 78 (337)
++++++|+...+..|... ++.++ .....+++..+.+++.+ .+.. ++. +..+.+++...+..|+++...++.+
T Consensus 134 l~a~~~~a~~~~~~k~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (260)
T TIGR00950 134 LGSGISFALGTVLYKRLV-KKEGPELLQFTGWVLLLGALLLLPFAWFL--GPN--PQALSLQWGALLYLGLIGTALAYFL 208 (260)
T ss_pred HHHHHHHHHHHHHHhHHh-hcCCchHHHHHHHHHHHHHHHHHHHHHhc--CCC--CCcchHHHHHHHHHHHHHHHHHHHH
Confidence 578999999999999985 56664 45555788888888888 5443 222 2336677778888888887899999
Q ss_pred HHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhh
Q 019712 79 AITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAF 136 (337)
Q Consensus 79 ~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~ 136 (337)
+++++++.+++.++.+.++.|+++.+++++++||+++.. ++.|+.+.+.|++
T Consensus 209 ~~~a~~~~~~~~~s~~~~~~pv~~~ll~~~~~~E~~~~~------~~~G~~li~~g~~ 260 (260)
T TIGR00950 209 WNKGLTLVDPSAASILALAEPLVALLLGLLILGETLSLP------QLIGGALIIAAVL 260 (260)
T ss_pred HHHHHhcCCchHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHhcC
Confidence 999999999999999999999999999999999999999 9999999998863
No 41
>PRK15430 putative chloramphenical resistance permease RarD; Provisional
Probab=99.17 E-value=4.9e-10 Score=101.42 Aligned_cols=139 Identities=13% Similarity=0.132 Sum_probs=110.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCccc--ccCcchHHHHHHHHH
Q 019712 166 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWK--LQPGIQRTAVIYAAI 243 (337)
Q Consensus 166 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~ 243 (337)
+..+|++++++++++|+...+..|.. .+. ++.+..+++..++.+..++...... +..... ..+...+. ....+.
T Consensus 5 ~~~~g~~~~l~a~~~wg~~~~~~k~~-~~~-~~~~~~~~R~~~a~~~l~~~~~~~~-~~~~~~~~~~~~~~~~-~~~~~~ 80 (296)
T PRK15430 5 QTRQGVLLALAAYFIWGIAPAYFKLI-YYV-PADEILTHRVIWSFFFMVVLMSICR-QWSYLKTLIQTPQKIF-MLAVSA 80 (296)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHHHh-cCC-CHHHHHHHHHHHHHHHHHHHHHHHc-cHHHHHHHHcCHHHHH-HHHHHH
Confidence 45589999999999999999999874 567 5999999999999887776654332 111110 01222222 233555
Q ss_pred HHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 244 VGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
+.....+.++++++++.+++.++++.++.|++..++++++++|+++..+++|.++.++|+.+...
T Consensus 81 ~~~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~v~l~~~~~l~E~~~~~~~~g~~l~~~Gv~li~~ 145 (296)
T PRK15430 81 VLIGGNWLLFIWAVNNHHMLEASLGYFINPLVNIVLGMIFLGERFRRMQWLAVILAICGVLVQLW 145 (296)
T ss_pred HHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHH
Confidence 56678899999999999999999999999999999999999999999999999999999987653
No 42
>TIGR00688 rarD rarD protein. This uncharacterized protein is predicted to have many membrane-spanning domains.
Probab=99.11 E-value=1.2e-09 Score=96.69 Aligned_cols=137 Identities=11% Similarity=0.120 Sum_probs=107.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCC---CcccccCcch-HHHHHHHHHH
Q 019712 169 LGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNP---SAWKLQPGIQ-RTAVIYAAIV 244 (337)
Q Consensus 169 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~ 244 (337)
+|.++.++++++|+...+..|. ..+. ++.+..++++..+.+...+......+.. ...+...... +..+...|++
T Consensus 2 ~g~~~~i~a~~~wg~~~~~~k~-~~~~-~~~~i~~~R~~~a~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 79 (256)
T TIGR00688 2 KGIIVSLLASFLFGYMYYYSKL-LKPL-PATDILGHRMIWSFPFMLLSVTLFRQWAALIERLKRIQKRPLILSLLLCGLL 79 (256)
T ss_pred CcHHHHHHHHHHHHHHHHHHHH-hccC-CHHHHHHHHHHHHHHHHHHHHHHHcchHHHHHHHhCcccchHHHHHHHHHHH
Confidence 4889999999999999999998 4567 6999999999999887766554332110 1111111122 3344555554
Q ss_pred HHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 245 GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
...++.++++++++++++.++.+.++.|+++.++++++++|+++.++++|..+.+.|+.+...
T Consensus 80 -~~~~~~~~~~a~~~~~~~~a~~l~~~~Pi~~~lla~~~l~Ek~~~~~~l~~~~~~~Gv~li~~ 142 (256)
T TIGR00688 80 -IGFNWWLFIWAVNNGSSLEVSLGYLINPLVMVALGRVFLKERISRFQFIAVIIATLGVISNIV 142 (256)
T ss_pred -HHHHHHHHHHHHHcchHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH
Confidence 468889999999999999999999999999999999999999999999999999999887643
No 43
>TIGR03340 phn_DUF6 phosphonate utilization associated putative membrane protein. This family of hydrophobic proteins has some homology to families of integral membrane proteins such as (pfam00892) and may be a permease. It occurs in the vicinity of various types of operons for the catabolism of phosphonates in Vibrio, Pseudomonas, Polaromonas and Thiomicrospira.
Probab=99.11 E-value=2.5e-09 Score=96.06 Aligned_cols=133 Identities=13% Similarity=0.197 Sum_probs=101.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHH
Q 019712 171 GLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRS 250 (337)
Q Consensus 171 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (337)
..+.+.++++||..++..|+..++.+ +. ..+....+++..+|....... ...++..+ ..+......+.+.....+
T Consensus 3 ~~~~~~aa~~~a~~~~~~k~~~~~~~-~~--~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~~~~~~ 77 (281)
T TIGR03340 3 LTLVVFSALMHAGWNLMAKSHADKEP-DF--LWWALLAHSVLLTPYGLWYLA-QVGWSRLP-ATFWLLLAISAVANMVYF 77 (281)
T ss_pred HHHHHHHHHHHHHHHHHHhhcCCchh-HH--HHHHHHHHHHHHHHHHHHhcc-cCCCCCcc-hhhHHHHHHHHHHHHHHH
Confidence 46788999999999999998766642 33 355556666666666653211 12222222 333334444445667888
Q ss_pred HHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 251 SIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 251 ~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
.++++++++.+++.++.+.+++|+++.+++++++||+++.++++|.++++.|+.+...
T Consensus 78 ~~~~~a~~~~~~~~~~~l~~~~p~~~~l~~~~~~~e~~~~~~~~g~~~~~~Gv~ll~~ 135 (281)
T TIGR03340 78 LGLAQAYHHADVGLVYPLARSSPLLVAIWATLTLGETLSPLAWLGILIITLGLLVLGL 135 (281)
T ss_pred HHHHHHHhcCChhhhhhHHhhhHHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999999999999988764
No 44
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=99.10 E-value=7.4e-10 Score=90.16 Aligned_cols=214 Identities=15% Similarity=0.153 Sum_probs=157.6
Q ss_pred HHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCC
Q 019712 68 GVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLL 147 (337)
Q Consensus 68 g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~ 147 (337)
.++. .+.+..|..|++..+++.++.+..+...|+.+++++++|+|+... ++.+..+++.|++++...++
T Consensus 60 ~i~W-t~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~------kIlaailAI~GiVmiay~DN---- 128 (290)
T KOG4314|consen 60 SIFW-TGANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGF------KILAAILAIGGIVMIAYADN---- 128 (290)
T ss_pred EEEE-ecCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhh------hHHHHHHHhCcEEEEEeccc----
Confidence 3443 677889999999999999999999999999999999999999999 99999999999998853322
Q ss_pred CCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHH----HHHHHHHhhccC
Q 019712 148 GFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTI----QCAVVSIIVERN 223 (337)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i----~~~~~~~~~~~~ 223 (337)
.....+.|+.+++.+++..|+|-+.-|+...+-. --....++...+.. ...|...+....
T Consensus 129 ---------------~~a~e~iGi~~AV~SA~~aAlYKV~FK~~iGnAn-~Gdaa~FmS~LGF~NL~~~~~~~lIL~~T~ 192 (290)
T KOG4314|consen 129 ---------------EHADEIIGIACAVGSAFMAALYKVLFKMFIGNAN-FGDAAHFMSCLGFFNLCFISFPALILAFTG 192 (290)
T ss_pred ---------------hhhhhhhhHHHHHHHHHHHHHHHHHHHHHhccCc-chhHHHHHHHHHHHHHHHHhhhHHHHHHhc
Confidence 2334578999999999999999999999876653 22222233222222 122222211122
Q ss_pred CCcccccCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHH
Q 019712 224 PSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGF 303 (337)
Q Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~ 303 (337)
.++|+......|..+...+.+. ..-....+.++....|...|+-+.....--...+.++-+-..+.....|..+|..|.
T Consensus 193 VE~~qsFA~~PWG~l~G~A~L~-lAFN~~iN~GiaL~~PilISiG~l~~iP~NaaiDiL~q~l~~ntl~La~T~iI~i~F 271 (290)
T KOG4314|consen 193 VEHLQSFAAAPWGCLCGAAGLS-LAFNFLINFGIALLNPILISIGMLCGIPGNAAIDILFQELEFNTLFLAATCIICIGF 271 (290)
T ss_pred hHHHHHHhhCCchhhhhHHHHH-HHHhhheeehhhhhchhhheehheecCcchhHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 2333322234466666555543 233456677888889999999998888888899988877789999999999999998
Q ss_pred HHHHhc
Q 019712 304 YAVIWA 309 (337)
Q Consensus 304 ~~~~~~ 309 (337)
.++...
T Consensus 272 iLiiiP 277 (290)
T KOG4314|consen 272 ILIIIP 277 (290)
T ss_pred Hheecc
Confidence 877653
No 45
>PRK13499 rhamnose-proton symporter; Provisional
Probab=98.99 E-value=3.3e-07 Score=83.32 Aligned_cols=292 Identities=14% Similarity=0.035 Sum_probs=171.2
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHH-HHHHHHHHHHH--HHHHhhcc---CCCCccCHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVY-YNALGTFILLH--YFIYNTYR---SKGPVLTFSLLCKFFMLGVLGICLV 75 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~-r~~~~~i~l~~--~~~~~~~~---~~~~~~~~~~~~~~~~~g~l~~~~~ 75 (337)
+++.++||...+..|.. ++.+=..+ +. -..++.++.-. ..+. .+ ......+.+.+..-++.|++- ..+
T Consensus 13 ~i~~~~~GS~~~p~K~~--k~w~wE~~-W~v~gi~~wl~~~~~~g~~~--~~~f~~~~~~~~~~~~~~~~l~G~~W-~iG 86 (345)
T PRK13499 13 LIGGASSGSFYAPFKKV--KKWSWETM-WSVGGIFSWLILPWLIAALL--LPDFWAYYSSFSGSTLLPVFLFGALW-GIG 86 (345)
T ss_pred HHHHHHhhccccccccc--CCCchhHH-HHHHHHHHHHHHHHHHHHHH--hhhHHHHHHhcCHHHHHHHHHHHHHH-Hhh
Confidence 46789999999999995 55552222 11 11111111110 0010 11 011224567778888889996 999
Q ss_pred HHHHHHhhcccCcchhhhhc-chhHHHHHHHHHHHhhccccccccC-ccchhhHHHHHhhhhheeeeccCCCCCCCCCCC
Q 019712 76 QIFAITGIKYSSPTLASAMG-NLIPGITFLLAVFFRMEKVAIRSRS-SQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPS 153 (337)
Q Consensus 76 ~~~~~~al~~~~~~~~~~i~-~~~pv~~~ll~~~~~~e~~~~~~~~-~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~ 153 (337)
+.+++.++++..++.+..+. .+.-++..++..++++|=.+..+-| ..-..+|+++.++|+++........+.
T Consensus 87 ~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~k~~------ 160 (345)
T PRK13499 87 GITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQLKER------ 160 (345)
T ss_pred hhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhhccc------
Confidence 99999999999999998885 4899999999999998754111111 222578888899999887431111100
Q ss_pred CCCCCCCCCCcchhHHHHHHHHHHHHHHHHHH-------HHHHHHhhhCCChhHHHHHHHH---HHHHHHHHH-HHh---
Q 019712 154 NSNIQLPVSEYSNWALGGLLLTVTCFSSATWK-------IFQAAVLKEYPDKINLVFFSCF---FGTIQCAVV-SII--- 219 (337)
Q Consensus 154 ~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~-------i~~k~~~~~~~~~~~~~~~~~~---~~~i~~~~~-~~~--- 219 (337)
+..++.+++.+..+|+++++++.+.+++|. ...+...+...++......+.. .+.++.-.. -.+
T Consensus 161 --~~~~~~~~~~~~~KGi~ialisgi~~~~f~~~~~~~~~~~~~a~~~g~~~~~~~lp~~~~~~~G~~~~n~~~~~~~~~ 238 (345)
T PRK13499 161 --KMGIKKAEEFNLKKGLILAVMSGIFSACFSFAMDAGKPMHEAAAALGVDPLYAALPSYVVIMGGGAITNLGFCFIRLA 238 (345)
T ss_pred --ccccccccccchHhHHHHHHHHHHHHHHHHHHHhhccchhhhhhhcCCCchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 000000234566789999999999999999 4333211111144444444443 333322211 111
Q ss_pred hccCCCccc-cc-CcchHHHH----HHHHHHHHHHHHHHHHHHhhccCceeeee----ccchhHHHHHHHHHHHhCCCCc
Q 019712 220 VERNPSAWK-LQ-PGIQRTAV----IYAAIVGTVIRSSIIAWCLQKKGPVFVAL----FKPLGTAIAVFMAVMFLGETPH 289 (337)
Q Consensus 220 ~~~~~~~~~-~~-~~~~~~~~----~~~~~~~~~~~~~~~~~~l~~~~~~~~s~----~~~~~pv~~~~~~~~~~~e~~t 289 (337)
.+.+..... .. +...+..- +..|+ .-.+++.+|..+-++.+...... .+.+..+++.+.+.+ ++|.=+
T Consensus 239 k~~~~~~~~~~~~~~~~~~~n~l~~~l~G~-~W~~~~~~y~~~~~~~g~~~~~~sw~l~m~~~ViistlwGi~-lkE~K~ 316 (345)
T PRK13499 239 KNKDLSLKADFSLAKPLLITNVLLSALAGV-MWYLQFFFYAMGHSKLGAQYDFVSWMLHMSFYVLCGNLWGLV-LKEWKG 316 (345)
T ss_pred hCCCcccchhccccchhHHHHHHHHHHHHH-HHHHHHHHHHHHHHHcCCccchHHHHHhccHHHHHHHHhhhh-hhhccC
Confidence 111111111 11 11111222 33333 33467777777777776554433 347888999999984 999866
Q ss_pred ------hhhHHHHHHHHHHHHHHHhc
Q 019712 290 ------LGSLIGTVVIAFGFYAVIWA 309 (337)
Q Consensus 290 ------~~~~~G~~lii~g~~~~~~~ 309 (337)
...++|.+++++|..+....
T Consensus 317 a~~k~~~~l~~G~vliI~g~~lig~~ 342 (345)
T PRK13499 317 ASRRPVRVLSLGCVVIILAANIVGLG 342 (345)
T ss_pred CCccchhHHHHHHHHHHHHHHHHhhc
Confidence 55689999999998887654
No 46
>PRK11272 putative DMT superfamily transporter inner membrane protein; Provisional
Probab=98.97 E-value=8.7e-09 Score=93.09 Aligned_cols=128 Identities=13% Similarity=0.028 Sum_probs=105.4
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
++++++|+...+..|... . -++...+.++...+.+.+.+ .... ........+.+.|..+...|+++..+.+.+++
T Consensus 156 l~a~~~~a~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~i~~l~i~~s~~~~~l~~ 231 (292)
T PRK11272 156 LIASASWAFGSVWSSRLP-L-PVGMMAGAAEMLAAGVVLLIASLLS--GERLTALPTLSGFLALGYLAVFGSIIAISAYM 231 (292)
T ss_pred HHHHHHHHHHHHHHHhcC-C-CcchHHHHHHHHHHHHHHHHHHHHc--CCcccccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467899999999999973 3 34566677888888887777 5433 22111123556788888889988789999999
Q ss_pred HhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 81 TGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
+++++.+++.++++..+.|+++++++++++||+++.. +++|..+.+.|+++..
T Consensus 232 ~~~~~~~~~~~s~~~~l~Pi~a~i~~~~~l~E~~t~~------~iiG~~lIi~gv~~~~ 284 (292)
T PRK11272 232 YLLRNVRPALATSYAYVNPVVAVLLGTGLGGETLSPI------EWLALGVIVFAVVLVT 284 (292)
T ss_pred HHHhhcCHHHHHHHHHHHHHHHHHHHHHHcCCCCcHH------HHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999 9999999999998874
No 47
>PRK10532 threonine and homoserine efflux system; Provisional
Probab=98.97 E-value=9.9e-09 Score=92.75 Aligned_cols=127 Identities=12% Similarity=0.076 Sum_probs=103.7
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
+.++++|+...+..|... ++.++...... ..++.+.+.+ .... .. ....+...+...+..|+++..+.+.+++
T Consensus 154 l~aa~~~a~~~v~~r~~~-~~~~~~~~~~~-~~~~~~~l~~~~~~~--~~--~~~~~~~~~~~~l~lgv~~t~~~~~l~~ 227 (293)
T PRK10532 154 LGAGACWAIYILSGQRAG-AEHGPATVAIG-SLIAALIFVPIGALQ--AG--EALWHWSILPLGLAVAILSTALPYSLEM 227 (293)
T ss_pred HHHHHHHHHHHHHHHHHh-ccCCchHHHHH-HHHHHHHHHHHHHHc--cC--cccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999984 67788777544 4556666666 4333 21 2223455566667888888899999999
Q ss_pred HhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeee
Q 019712 81 TGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSL 140 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 140 (337)
+++++.+++.++++.++.|+++.++++++++|+++.. +++|.++.+.|++..+.
T Consensus 228 ~~~~~~~a~~as~~~~l~Pv~a~l~~~l~lgE~~~~~------~~iG~~lIl~~~~~~~~ 281 (293)
T PRK10532 228 IALTRLPTRTFGTLMSMEPALAAVSGMIFLGETLTLI------QWLALGAIIAASMGSTL 281 (293)
T ss_pred HHHHhcChhHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999 99999999999998754
No 48
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.96 E-value=1.6e-08 Score=79.23 Aligned_cols=122 Identities=13% Similarity=0.140 Sum_probs=93.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHH
Q 019712 169 LGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVI 248 (337)
Q Consensus 169 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 248 (337)
.|.++.+.+.++-+...+..|+-.++.+ ....... . . ...... . + ....++.|+++..+
T Consensus 2 ~~~~~i~~sv~l~~~gQl~~K~g~~~~g-~~~~~~~-~----~-~~~~~~---~--------~---p~~~i~lgl~~~~l 60 (129)
T PRK02971 2 MGYLWGLASVLLASVAQLSLKWGMSRLP-LLSHAWD-F----I-AALLAF---G--------L---ALRAVLLGLAGYAL 60 (129)
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHhhCC-CccchhH-H----H-HHHHHH---h--------c---cHHHHHHHHHHHHH
Confidence 4788899999999999999999888774 2221111 0 0 000000 0 0 01246788889999
Q ss_pred HHHHHHHHhhccCceeeeeccchhHHHHHHHHHH--HhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 249 RSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVM--FLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 249 ~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~--~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
++.+|.+++++.+.+.+..+..+.+++..+.++. ++||++|+.+++|+++|++|+++..+.++
T Consensus 61 a~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~~~iGi~lIi~GV~lv~~~~~ 125 (129)
T PRK02971 61 SMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLKKTLGVACIMLGVWLINLPTT 125 (129)
T ss_pred HHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhccCCC
Confidence 9999999999999999999999988888888875 89999999999999999999999875443
No 49
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=98.92 E-value=1.5e-08 Score=87.82 Aligned_cols=209 Identities=13% Similarity=0.077 Sum_probs=125.4
Q ss_pred CcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccCCCCC--------CCCCCCCCCCC
Q 019712 87 SPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLL--------GFSSPSNSNIQ 158 (337)
Q Consensus 87 ~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~--------~~~~~~~~~~~ 158 (337)
++.......+..++++++.++...++|.+.. |+++.++...|++.....+.+... ...+..+. +
T Consensus 3 svPa~~~~~s~~l~~v~l~~~~~~~~~~~~~------~i~~~~l~~~g~l~~~ls~~q~~al~~l~~~~~~~~~~~~-~- 74 (222)
T TIGR00803 3 SVPIHIIFKQNNLVLIALGNLLAAGKQVTQL------KILSTALMTLGSLVASLGDDQWFSLKLLKLGVAIVQMVQS-S- 74 (222)
T ss_pred cccchHHHHhcchHHHHHhcccccceeeehH------HHHHHHHHHHHHHHhHhhHHHHHHHHHHHHhHeeeecCCC-C-
Confidence 3444556677777888888887778887777 787777777777643221110000 00000000 0
Q ss_pred CCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCCh-hHHHHHHHHHHHHHHHHHHHhhccCC-CcccccCcchHH
Q 019712 159 LPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDK-INLVFFSCFFGTIQCAVVSIIVERNP-SAWKLQPGIQRT 236 (337)
Q Consensus 159 ~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~-~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~ 236 (337)
+......+...|..+.+.+.++.+...+.+++..|+.+.. ..........+.+.........+.+. ..+.. ...+.
T Consensus 75 ~~~~~~g~~~~g~~~~l~a~~~~~~~~~y~e~~~k~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~ 152 (222)
T TIGR00803 75 AKTLMFGNPVVGLSAVLSALLSSGFAGVYFEKILKDGDTMFWSRNLQLPLFGLFSTFSVLLWSDGTLISNFGF--FIGYP 152 (222)
T ss_pred ccccccccHHHHHHHHHHHHHHHhhhHHHHHHcccCCCCchHHHHHHHHHHHHHHHHHHHhhcccchhhccCc--ccCCc
Confidence 0001123456788888888888889999988876654311 11122222222222122111111111 11110 01111
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHH
Q 019712 237 AVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYA 305 (337)
Q Consensus 237 ~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~ 305 (337)
...+.-++....+..+....+++.++...+....++++++.+++++++||+++..++.|+.+++.|+++
T Consensus 153 ~~~~~~~~~~a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~~~~g~~lV~~~~~l 221 (222)
T TIGR00803 153 TAVWIVGLLNVGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISSTFYLGAILVFLATFL 221 (222)
T ss_pred hHHHHHHHHHHhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHHHHHHHHHHHeeeEe
Confidence 122222234567778888999999999999999999999999999999999999999999999998764
No 50
>PLN00411 nodulin MtN21 family protein; Provisional
Probab=98.88 E-value=3.7e-08 Score=91.03 Aligned_cols=142 Identities=11% Similarity=0.112 Sum_probs=115.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHH
Q 019712 167 WALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGT 246 (337)
Q Consensus 167 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (337)
..+-.+.+++.-++|+.+.++.|...+.--++....++++.+++++++++....++.. ..+..+...+..+...|+++
T Consensus 11 ~~~~~~~~~~~q~~~~~~~~~~k~a~~~G~~~~~~~~~R~~iA~l~Ll~~~~~~~~~~-~~~~~~~~~~~~l~l~g~~g- 88 (358)
T PLN00411 11 EAVFLTAMLATETSVVGISTLFKVATSKGLNIYPFLGYSYLLASLLLLPSLFFTNRSR-SLPPLSVSILSKIGLLGFLG- 88 (358)
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHCCCCccHHHHHHHHHHHHHHHHHHHHHHHhc-ccCcchHHHHHHHHHHHHHH-
Confidence 3456677888899999999999998876558999999999999999988877554321 11111234566677777766
Q ss_pred HHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHH------hCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 247 VIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMF------LGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~------~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
.+.+.+++.++++++++.++++.++.|+++.++++++ ++|+++..+++|.++.++|+.+....+
T Consensus 89 ~~~~~~~~~gl~~tsa~~asll~~~~P~~~~lla~~~~~e~~~~~er~~~~~~~G~~l~~~Gv~ll~~~~ 158 (358)
T PLN00411 89 SMYVITGYIGIEYSNPTLASAISNITPALTFILAIIFRMEKVSFKERSSVAKVMGTILSLIGALVVIFYH 158 (358)
T ss_pred HHHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHHhchhhhcccccHHHHHHHHHHHHHHHHHHHcc
Confidence 4666788999999999999999999999999999999 699999999999999999998877543
No 51
>PRK11689 aromatic amino acid exporter; Provisional
Probab=98.88 E-value=2.1e-08 Score=90.71 Aligned_cols=124 Identities=14% Similarity=0.160 Sum_probs=97.9
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
+.++++|+.+.+..|... ++.++..... ..+.+.+.+ .... .......+.+.+..++..|+. ..+.+.+++
T Consensus 162 l~aa~~~A~~~v~~k~~~-~~~~~~~~~~---~~~~~~l~~~~~~~---~~~~~~~~~~~~~~l~~~~~~-t~~~~~l~~ 233 (295)
T PRK11689 162 FIGAFIWAAYCNVTRKYA-RGKNGITLFF---ILTALALWIKYFLS---PQPAMVFSLPAIIKLLLAAAA-MGFGYAAWN 233 (295)
T ss_pred HHHHHHHHHHHHHHhhcc-CCCCchhHHH---HHHHHHHHHHHHHh---cCccccCCHHHHHHHHHHHHH-HHHHHHHHH
Confidence 578999999999999984 6778776532 233333333 3222 222233556677777777755 588999999
Q ss_pred HhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 81 TGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
+++++.+++.++.+.++.|+++.++++++++|+++.. +++|+++.+.|+++..
T Consensus 234 ~al~~~~a~~~s~~~~l~Pv~a~i~~~~~lgE~~~~~------~~iG~~lI~~gv~~~~ 286 (295)
T PRK11689 234 VGILHGNMTLLATASYFTPVLSAALAALLLSTPLSFS------FWQGVAMVTAGSLLCW 286 (295)
T ss_pred HHHHccCHHHHHHHHHhHHHHHHHHHHHHhCCCCcHH------HHHHHHHHHHhHHHHh
Confidence 9999999999999999999999999999999999999 9999999999998763
No 52
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=98.83 E-value=7e-08 Score=86.92 Aligned_cols=227 Identities=14% Similarity=0.220 Sum_probs=129.1
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeecc
Q 019712 63 KFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYK 142 (337)
Q Consensus 63 ~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~ 142 (337)
+....|.+.+.++..+.+.|+.+.|.+..+.+..+.-++.++++..++|||++.+ ++.|+.+++.|..++....
T Consensus 51 ~~W~~G~~~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~------~~~G~~l~i~G~~liv~~~ 124 (300)
T PF05653_consen 51 PLWWIGLLLMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRR------DIVGCALIILGSVLIVIFA 124 (300)
T ss_pred HHHHHHHHHHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHh------HHhhHHHHHhhheeeEEeC
Confidence 4456777777889999999999999999999999999999999999999999999 9999999999998875432
Q ss_pred CCCCCCCCCCCCCCCCC--CCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHH---HHHHHH---
Q 019712 143 GPPLLGFSSPSNSNIQL--PVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFF---GTIQCA--- 214 (337)
Q Consensus 143 ~~~~~~~~~~~~~~~~~--~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~---~~i~~~--- 214 (337)
..+.... +.++ ..-.+...... .... ..+...+.....+|..++. . ..+...+ ++...+
T Consensus 125 ~~~~~~~------t~~~l~~~~~~~~fl~y-~~~~-~~~~~~L~~~~~~r~g~~~--i---~vyi~i~sl~Gs~tvl~~K 191 (300)
T PF05653_consen 125 PKEEPIH------TLDELIALLSQPGFLVY-FILV-LVLILILIFFIKPRYGRRN--I---LVYISICSLIGSFTVLSAK 191 (300)
T ss_pred CCCCCcC------CHHHHHHHhcCcceehh-HHHH-HHHHHHHHHhhcchhcccc--e---EEEEEEeccccchhhhHHH
Confidence 2211100 0000 00000111111 1111 1111112222222211111 1 1111111 111000
Q ss_pred -HHHHhhc--cCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchh-HHHHHHHHHHHhCCC--C
Q 019712 215 -VVSIIVE--RNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLG-TAIAVFMAVMFLGET--P 288 (337)
Q Consensus 215 -~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~-pv~~~~~~~~~~~e~--~ 288 (337)
....+.+ .+..++ ..+..|..++. .+.+........++++++.+++.+..+.+.. ...+++-|.++++|. .
T Consensus 192 ~i~~~i~~~~~g~~~f--~~~~~y~l~~~-~v~~~~~Q~~~LN~aL~~fd~~~V~P~~~v~~t~~~i~~g~i~f~e~~~~ 268 (300)
T PF05653_consen 192 AISILIKLTFSGDNQF--TYPLTYLLLLV-LVVTAVLQLYYLNKALKRFDTSLVVPVYYVFFTLSSIIGGAIFFQEFSRM 268 (300)
T ss_pred HHHHHHHHHhcCchhh--hhhHHHHHHHH-HHHHHHHHHHHHHHHHHhccceEEEeehhHHHHHHHHHHHHHHhcccccc
Confidence 0001111 111122 12233333332 2334456667778999999998888877765 566777778888875 4
Q ss_pred chhh----HHHHHHHHHHHHHHHhccC
Q 019712 289 HLGS----LIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 289 t~~~----~~G~~lii~g~~~~~~~~~ 311 (337)
++.+ ..|..+++.|+++++..+.
T Consensus 269 ~~~~~~~~~~G~~~ii~GV~lL~~~~~ 295 (300)
T PF05653_consen 269 TAWQIIGFLCGFLIIIIGVFLLSSSKD 295 (300)
T ss_pred cHHHHHHHHHHHHHHHHhhheeeccCc
Confidence 5533 5677778888887764433
No 53
>PF13536 EmrE: Multidrug resistance efflux transporter
Probab=98.83 E-value=2.2e-08 Score=77.14 Aligned_cols=108 Identities=15% Similarity=0.259 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHH
Q 019712 204 FSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMF 283 (337)
Q Consensus 204 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~ 283 (337)
++...+.+..........+..+.+.....+.+......|+++...++.++.+++++.++ .++.+..++|+++.+++.++
T Consensus 3 ~r~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~a~~~~~~-~v~~i~~~~pi~~~ll~~~~ 81 (113)
T PF13536_consen 3 FRYLFSVLFLLIILLIRGRLRDLFRALRRKPWLWLILAGLLGFGVAYLLFFYALSYAPA-LVAAIFSLSPIFTALLSWLF 81 (113)
T ss_pred HHHHHHHHHHHHHHHHHccHHHHHHHHHhCcHHHHHHHHHHHHHHHHHHHHHHHHhCcH-HHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555443221111111122445556666776666889999999999994 88899999999999999999
Q ss_pred hCCCCchhhHHHHHHHHHHHHHHHhccCc
Q 019712 284 LGETPHLGSLIGTVVIAFGFYAVIWAQGK 312 (337)
Q Consensus 284 ~~e~~t~~~~~G~~lii~g~~~~~~~~~~ 312 (337)
++|++++.+++|.+++++|+.++.+.+..
T Consensus 82 ~~er~~~~~~~a~~l~~~Gv~li~~~~~~ 110 (113)
T PF13536_consen 82 FKERLSPRRWLAILLILIGVILIAWSDLT 110 (113)
T ss_pred hcCCCCHHHHHHHHHHHHHHHHHhhhhcc
Confidence 99999999999999999999999876544
No 54
>PRK11453 O-acetylserine/cysteine export protein; Provisional
Probab=98.72 E-value=2.8e-07 Score=83.53 Aligned_cols=126 Identities=10% Similarity=0.091 Sum_probs=97.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHH
Q 019712 171 GLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRS 250 (337)
Q Consensus 171 ~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (337)
.++.+++++.|+...+..|...++. +|....++++.++++..++... .+. ..+..+...|+......+
T Consensus 6 ~l~~l~~~~~Wg~~~~~~k~~~~~~-~p~~~~~~R~~~a~~~l~~~~~---~~~--------~~~~~~~~~g~~~~~~~~ 73 (299)
T PRK11453 6 GVLALLVVVVWGLNFVVIKVGLHNM-PPLMLAGLRFMLVAFPAIFFVA---RPK--------VPLNLLLGYGLTISFGQF 73 (299)
T ss_pred HHHHHHHHHHHhhhHHHHHHHHhcC-CHHHHHHHHHHHHHHHHHHHhc---CCC--------CchHHHHHHHHHHHHHHH
Confidence 3568889999999999999988877 6999999999987766554321 111 111223333443434455
Q ss_pred HHHHHHhhc-cCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 251 SIIAWCLQK-KGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 251 ~~~~~~l~~-~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
.+++.+.++ .+++.++++.++.|+++.++++++++|+++..+++|.++.++|+.+...
T Consensus 74 ~~~~~~~~~~~~a~~a~~l~~~~pi~~~ll~~~~l~e~~~~~~~~~~~l~~~Gv~ll~~ 132 (299)
T PRK11453 74 AFLFCAINFGMPAGLASLVLQAQAFFTIVLGAFTFGERLQGKQLAGIALAIFGVLVLIE 132 (299)
T ss_pred HHHHHHHHhcCCHHHHHHHHHhHHHHHHHHHHHHhcCcCcHHHHHHHHHHHHhHHHhcc
Confidence 566778887 5778999999999999999999999999999999999999999988764
No 55
>TIGR00817 tpt Tpt phosphate/phosphoenolpyruvate translocator. specificities overlap.
Probab=98.70 E-value=3.6e-07 Score=82.98 Aligned_cols=126 Identities=17% Similarity=0.173 Sum_probs=99.7
Q ss_pred HHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHh
Q 019712 178 CFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCL 257 (337)
Q Consensus 178 ~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 257 (337)
-.+...+++++|...++.+.|....++++..+.+...+........... .+.+++..++..|++. ...+.+.+.++
T Consensus 11 ~~~~~~~~~~NK~~l~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~g~~~-~~~~~~~~~~l 86 (302)
T TIGR00817 11 YFLNVYFNIYNKKLLNVFPYPYFKTLISLAVGSLYCLLSWSSGLPKRLK---ISSALLKLLLPVAIVH-TIGHVTSNVSL 86 (302)
T ss_pred HHHHHHHHHHHHHHHhhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCC---CCHHHHHHHHHHHHHH-HHHHHHHHHHH
Confidence 3444556678899988866799999999988877665542111111112 1345777888888875 67789999999
Q ss_pred hccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 258 QKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 258 ~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
++++++..+++..+.|+++.++++++++|+++..++.|.+++++|+.+..
T Consensus 87 ~~~s~s~~~li~~~~Pv~~~ll~~~~~~e~~~~~~~~~l~l~~~Gv~l~~ 136 (302)
T TIGR00817 87 SKVAVSFTHTIKAMEPFFSVVLSAFFLGQEFPSTLWLSLLPIVGGVALAS 136 (302)
T ss_pred HhccHHHHHHHHhcchHHHHHHHHHHhCCCCcHHHHHHHHHHHHHHhhhc
Confidence 99999999999999999999999999999999999999999999997653
No 56
>PTZ00343 triose or hexose phosphate/phosphate translocator; Provisional
Probab=98.68 E-value=6.1e-07 Score=83.09 Aligned_cols=139 Identities=11% Similarity=0.028 Sum_probs=105.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHH
Q 019712 167 WALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGT 246 (337)
Q Consensus 167 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (337)
...-..+.+.--.+...+++.+|...++.+-|.++..+++.++.+..............+.+ .....+..++.+|++..
T Consensus 47 ~~~~~~~~~~wy~~s~~~~~~nK~vl~~~~~P~~l~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~llp~gl~~~ 125 (350)
T PTZ00343 47 KWKLALLFLTWYALNVLYVVDNKLALNMLPLPWTISSLQLFVGWLFALLYWATGFRKIPRIK-SLKLFLKNFLPQGLCHL 125 (350)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhCChhHHHHHHHHHHHHHHHHHHHHhCCCCCCCCC-CHHHHHHHHHHHHHHHH
Confidence 34455555666666677888899999988449999999999998765544321111111111 01235667777887664
Q ss_pred HHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 247 VIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
..+...+.++++.+++.++++..++|+++.++++++++|+++..++.|.+++++|+.+..
T Consensus 126 -~~~~~~~~sl~~~svs~~~iika~~Pvft~lls~~~l~ek~s~~~~l~l~l~v~Gv~l~~ 185 (350)
T PTZ00343 126 -FVHFGAVISMGLGAVSFTHVVKAAEPVFTALLSILFLKQFLNLYAYLSLIPIVGGVALAS 185 (350)
T ss_pred -HHHHHHHHHHhhccHHHHHHHHHhhHHHHHHHHHHHhCCCccHHHHHHHHHHHHHHHhee
Confidence 346667799999999999999999999999999999999999999999999999998765
No 57
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=98.68 E-value=9.4e-09 Score=86.71 Aligned_cols=268 Identities=17% Similarity=0.192 Sum_probs=185.9
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
++.++.||....+.... +-+|.+.+..-- ++++.+.. .++. ..|..+.+.+..-++.|.+. ..++...+
T Consensus 8 L~P~l~WGsip~v~~k~---GG~p~qQ~lGtT-~GALifaiiv~~~-----~~p~~T~~~~iv~~isG~~W-s~GQ~~Qf 77 (288)
T COG4975 8 LLPALGWGSIPLVANKF---GGKPYQQTLGTT-LGALIFAIIVFLF-----VSPELTLTIFIVGFISGAFW-SFGQANQF 77 (288)
T ss_pred HHHHHHhcccceeeeec---CCChhHhhhhcc-HHHHHHHHHHhee-----ecCccchhhHHHHHHhhhHh-hhhhhhhh
Confidence 45688999887766543 346776655543 44444444 4333 22444666677777888887 99999999
Q ss_pred HhhcccCcchhhhhcc-hhHHHHHHHHHHHhhccccccccCccchh----hHHHHHhhhhheeeeccCCCCCCCCCCCCC
Q 019712 81 TGIKYSSPTLASAMGN-LIPGITFLLAVFFRMEKVAIRSRSSQAKI----LGTVVSIAGAFIVSLYKGPPLLGFSSPSNS 155 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~-~~pv~~~ll~~~~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~ 155 (337)
.|.++.+++.+..+.. ++-+-+.++++++++|=.+.. +. +++.+.+.|+.+-+..+..+
T Consensus 78 ka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~------~~IlG~iAliliviG~~lTs~~~~~n---------- 141 (288)
T COG4975 78 KAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPT------QIILGFIALILIVIGIYLTSKQDRNN---------- 141 (288)
T ss_pred hheeeeeeeccccccchhhHhhceeeeEEEEeccCcch------hHHHHHHHHHHHHHhheEeeeecccc----------
Confidence 9999999999999976 888899999999999987776 53 34666677777654322111
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchH
Q 019712 156 NIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQR 235 (337)
Q Consensus 156 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~ 235 (337)
...++..+.-+|+...+.+.++|-.|.+..+... . |.++...-+.....+..+....... +. . ..+..
T Consensus 142 ---k~~~~~~n~kkgi~~L~iSt~GYv~yvvl~~~f~--v-~g~saiLPqAiGMv~~ali~~~~~~-~~-~----~~K~t 209 (288)
T COG4975 142 ---KEEENPSNLKKGIVILLISTLGYVGYVVLFQLFD--V-DGLSAILPQAIGMVIGALILGFFKM-EK-R----FNKYT 209 (288)
T ss_pred ---ccccChHhhhhheeeeeeeccceeeeEeeecccc--c-cchhhhhHHHHHHHHHHHHHhhccc-cc-c----hHHHH
Confidence 0112334456799999999999999999876542 3 4566666665555554444444221 11 1 22333
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHHHHHHh
Q 019712 236 TAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSL----IGTVVIAFGFYAVIW 308 (337)
Q Consensus 236 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~~~~~ 308 (337)
+.-+.-|+. -..+...+..+-++.+.++.=.+..+..+++.+-+.++++|+=|..++ +|.++++.|..+...
T Consensus 210 ~~nii~G~~-Wa~GNl~ml~a~~~~GvAt~FSlSQlgViisTiGGIl~L~ekKtkkEm~~v~iGiilivvgai~lg~ 285 (288)
T COG4975 210 WLNIIPGLI-WAIGNLFMLLAAQKVGVATSFSLSQLGVIISTIGGILFLGEKKTKKEMVYVIIGIILIVVGAILLGI 285 (288)
T ss_pred HHHHhhHHH-HHhhHHHHHHhhhhhceeeeeeHhhheeeeeecceEEEEeccCchhhhhhhhhhHHHHHHHhhhhhe
Confidence 333444543 357888888999999999998999999999999999999999998874 677888888766543
No 58
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.61 E-value=3.2e-07 Score=70.12 Aligned_cols=68 Identities=22% Similarity=0.157 Sum_probs=62.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 65 FMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 65 ~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
...+++++.++..++..++++.|.+.+..+.++.++++.+++++++|||++.+ +++|+.+.+.|++++
T Consensus 40 ~~~~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~------~~~Gi~lii~Gv~~i 107 (111)
T PRK15051 40 LGLALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPR------HWCGVAFIIGGIVIL 107 (111)
T ss_pred HHHHHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHH
Confidence 33444667899999999999999999999999999999999999999999999 999999999999876
No 59
>COG2962 RarD Predicted permeases [General function prediction only]
Probab=98.60 E-value=6.2e-07 Score=78.09 Aligned_cols=141 Identities=11% Similarity=0.119 Sum_probs=114.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCccc-ccCcchHHHHHHHHHHHH
Q 019712 168 ALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWK-LQPGIQRTAVIYAAIVGT 246 (337)
Q Consensus 168 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 246 (337)
..|+++++.|-+.|+..-.+.|.+ +.. ++.++..++.+.+....+...........-++ ..+++.+..+...++..
T Consensus 6 ~~Gil~~l~Ay~lwG~lp~y~kll-~~~-~~~eIlahRviwS~~~~l~ll~~~r~~~~~~~~~~~p~~~~~~~l~a~li- 82 (293)
T COG2962 6 RKGILLALLAYLLWGLLPLYFKLL-EPL-PATEILAHRVIWSFPFMLALLFLLRQWRELKQLLKQPKTLLMLALTALLI- 82 (293)
T ss_pred cchhHHHHHHHHHHHHHHHHHHHH-ccC-CHHHHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHhCcHHHHHHHHHHHHH-
Confidence 369999999999999999998884 666 48899999998888777666554432222221 23445666666666655
Q ss_pred HHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 247 VIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
...+..|.++.++.....+|.-.+++|.+.+++|.++++|+++..|++..++..+|+....+...
T Consensus 83 ~~nW~lfiWAvn~g~~leaSLGY~InPL~~VllG~lflkErls~~Q~iAV~lA~~GV~~~~~~~g 147 (293)
T COG2962 83 GLNWWLFIWAVNNGHVLEASLGYFINPLVNVLLGRLFLKERLSRLQWIAVGLAAAGVLIQTWLLG 147 (293)
T ss_pred HHHHHHhheecCCCchhHHHhHHHHHHHHHHHHHHHHHHhhccHHHHHHHHHHHHHHHHHHHHcC
Confidence 48889999999999999999999999999999999999999999999999999999988776443
No 60
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.54 E-value=5.7e-07 Score=79.21 Aligned_cols=229 Identities=16% Similarity=0.228 Sum_probs=140.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeecc
Q 019712 63 KFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYK 142 (337)
Q Consensus 63 ~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~ 142 (337)
+....|.+.+.++...-|.|..+.|.+..+.+..+.-++.++++..++|||++.. ..+|+.++++|-.+++. .
T Consensus 65 ~~Ww~G~ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~------g~lGc~l~v~Gst~iV~-h 137 (335)
T KOG2922|consen 65 PLWWAGMLTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLL------GILGCVLCVVGSTTIVI-H 137 (335)
T ss_pred HHHHHHHHHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHh------hhhheeEEecccEEEEE-e
Confidence 3455788888999999999999999999999999999999999999999999999 99999999999888843 3
Q ss_pred CCCCCCCCCCCCCCCCCCC---CCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHH-
Q 019712 143 GPPLLGFSSPSNSNIQLPV---SEYSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSI- 218 (337)
Q Consensus 143 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~- 218 (337)
.+....- .+.++. -.+.....-..+.++... +-.... .+++ .......|..+++.+-.+-+.-
T Consensus 138 aP~e~~i------~t~~el~~~~~~~~Fliy~~~iil~~~---il~~~~---~p~~-g~tnilvyi~i~s~iGS~tV~sv 204 (335)
T KOG2922|consen 138 APKEQEI------ESVEEVWELATEPGFLVYVIIIILIVL---ILIFFY---APRY-GQTNILVYIGICSLIGSLTVMSV 204 (335)
T ss_pred cCccccc------ccHHHHHHHhcCccHHHHHHHHHHHHH---HHheee---cccc-cccceeehhhHhhhhcceeeeeH
Confidence 3221100 000000 011111111111111111 111111 1223 2444556666666553221111
Q ss_pred ------h--hccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchh-HHHHHHHHHHHhCCC--
Q 019712 219 ------I--VERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLG-TAIAVFMAVMFLGET-- 287 (337)
Q Consensus 219 ------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~-pv~~~~~~~~~~~e~-- 287 (337)
+ .-.+..+.. .+..|..++.... +...-....+++++..+++.++.+.+.- ..++++.+.++|+|.
T Consensus 205 Kalg~aiklt~~g~~ql~--~~~ty~~~l~~~~-~~~~Q~~yLNkAL~~fntslV~PiyyV~fTtl~I~as~I~Fkew~~ 281 (335)
T KOG2922|consen 205 KALGIAIKLTFSGNNQLF--YPLTWIFLLVVAT-CVSTQMNYLNKALDLFNTSIVSPIYYVMFTTLVILASAILFKEWSG 281 (335)
T ss_pred HHHHHHHHHHhcCCcccc--cHHHHHHHHHHHH-HHHHHHHHHHHHHHhhhhhhcchhHHHHHHHHHHHHHHHHHHHhcC
Confidence 0 111111221 2244444444443 3345556677999999988888777765 677888899999885
Q ss_pred Cchh----hHHHHHHHHHHHHHHHhccCccc
Q 019712 288 PHLG----SLIGTVVIAFGFYAVIWAQGKES 314 (337)
Q Consensus 288 ~t~~----~~~G~~lii~g~~~~~~~~~~~~ 314 (337)
.+.. ...|...++.|++++...|..+.
T Consensus 282 ~~~~~i~~~~~Gf~ti~~G~flL~~~kd~~~ 312 (335)
T KOG2922|consen 282 QDALDIAGELCGFVTIFLGIFLLHRTKDMEI 312 (335)
T ss_pred CcHHHHHHHHHhHHHhhheeeEeeeeccccc
Confidence 3333 45788888889888865544443
No 61
>PF03151 TPT: Triose-phosphate Transporter family; InterPro: IPR004853 This family consists entirely of aligned regions from Drosophila melanogaster proteins. O49724 from SWISSPROT contains three repeats of this region. In other proteins, the aligned region is located towards the C terminus. The function of the aligned region is unknown.
Probab=98.51 E-value=2.9e-06 Score=68.83 Aligned_cols=127 Identities=21% Similarity=0.288 Sum_probs=106.1
Q ss_pred chhHHHHHHHHHHHHHHHhC------CCChHHHHHHHHHHHHHHHHH-HHHHhhccCCC----C-----cc--CHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSS------GMSNFVYVVYYNALGTFILLH-YFIYNTYRSKG----P-----VL--TFSLLCK 63 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~------~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~----~-----~~--~~~~~~~ 63 (337)
+.+.++.+...+..|..+.+ +.++.++..+....+.+++++ .... ++.+. . +. +.+.+..
T Consensus 6 l~s~~~~al~~v~~~~~~~~~~~~~~~~~~~~l~~~~~~~s~~~l~~~~~~~--e~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (153)
T PF03151_consen 6 LASSLFSALRNVLIKKLLKKVSSNSKKLNPLNLLYYNSPISFIILLPLAFLL--EGPQLSSFFSEIFGEELSSDPNFIFL 83 (153)
T ss_pred HHHHHHHHHHHHHHHHHHhcccccccCCCHHHHHHHHHHHHHHHHHHHHHHH--hhhhhhhHHHHhhhhhhcchHHHHHH
Confidence 56788899999999997765 689999999999999999998 6665 33221 0 00 2344566
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhe
Q 019712 64 FFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFI 137 (337)
Q Consensus 64 ~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 137 (337)
++..|+++ ...+...+..++++++...++......+.+.++++++++|+++.. ++.|+++++.|+++
T Consensus 84 ~~~~~~~~-~~~n~~~f~~i~~tS~lt~~v~~~~K~~~~i~~s~~~f~~~~t~~------~~~G~~l~~~G~~~ 150 (153)
T PF03151_consen 84 LILSGLLA-FLYNLSSFLLIKLTSPLTYSVLGNVKRILVILLSVIFFGEPITPL------QIIGIVLALVGVLL 150 (153)
T ss_pred HHHHHHHH-HHHHHHHHHHhhhcChhHHHHHHHHHHHHHHHHHhhhcCCcCCHH------HHHHHHHHHHHHhe
Confidence 66677776 889999999999999999999999999999999999999999999 99999999999875
No 62
>PRK15051 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE; Provisional
Probab=98.47 E-value=1.1e-06 Score=67.07 Aligned_cols=67 Identities=15% Similarity=0.004 Sum_probs=61.3
Q ss_pred HHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 242 AIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 242 ~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
++++..+++.++.+++++.+.+.+-.+.++.++.+.+++++++||++|+.+++|.+++++|+.+...
T Consensus 43 ~~~~~~l~~~~~~~al~~iplg~Ay~~~~l~~v~~~~~~~l~f~E~ls~~~~~Gi~lii~Gv~~i~~ 109 (111)
T PRK15051 43 ALACLGLAMVLWLLVLQNVPVGIAYPMLSLNFVWVTLAAVKLWHEPVSPRHWCGVAFIIGGIVILGS 109 (111)
T ss_pred HHHHHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhc
Confidence 3455678999999999999999999999999999999999999999999999999999999987653
No 63
>COG0697 RhaT Permeases of the drug/metabolite transporter (DMT) superfamily [Carbohydrate transport and metabolism / Amino acid transport and metabolism / General function prediction only]
Probab=98.35 E-value=1.4e-05 Score=71.67 Aligned_cols=143 Identities=14% Similarity=0.135 Sum_probs=105.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHH
Q 019712 167 WALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGT 246 (337)
Q Consensus 167 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (337)
...+....+..++.|+......|...++..+.......+...+.+...+... .+. ....+ ....+......+.+..
T Consensus 5 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~--~~~~~~~~~~~~~~~~ 80 (292)
T COG0697 5 LLLGLLALLLWGLLWGLSFIALKLAVESLDPFLFAAALRFLIAALLLLPLLL-LEP-RGLRP--ALRPWLLLLLLALLGL 80 (292)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccCChHHHHHHHHHHHHHHHHHHHH-hhc-ccccc--cccchHHHHHHHHHHH
Confidence 4467888888889999999999887766323555555577766666333332 111 11111 1122344455566677
Q ss_pred HHHHHHHHHHhhccCceeeeeccchhHHHHHHHHH-HHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 247 VIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAV-MFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~-~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
...+.+++.++++.+++..+.+.++.|++..+++. ++++|++++.++.|..+...|+.+..+....+
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~~~~~~e~~~~~~~~~~~~~~~Gv~lv~~~~~~~ 148 (292)
T COG0697 81 ALPFLLLFLALKYTSASVASLIIGLLPLFTALLAVLLLLGERLSLLQILGILLALAGVLLILLGGGGG 148 (292)
T ss_pred HHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHccCCCcHHHHHHHHHHHHhHHheecCCCcc
Confidence 88999999999999999999999999999999997 77799999999999999999999888755543
No 64
>TIGR00776 RhaT RhaT L-rhamnose-proton symporter family protein. These proteins are members of the L-Rhamnose Symporter (RhaT) Family (TC 2.A.7). This family includes two characterized members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.
Probab=98.22 E-value=1.4e-05 Score=72.05 Aligned_cols=122 Identities=16% Similarity=0.159 Sum_probs=93.8
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHH---HHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNAL---GTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIF 78 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~---~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~ 78 (337)
+++.++++.+.+..|.. +.+|...++.+... +..++.+.. + + .++. +.+.....++.|++. ...+.+
T Consensus 158 l~sg~~y~~~~~~~~~~---~~~~~~~~~~~~~g~~~~~~~~~~~~-~---~-~~~~-~~~~~~~~~~~Gi~~-~ia~~~ 227 (290)
T TIGR00776 158 LMSTIGYLVYVVVAKAF---GVDGLSVLLPQAIGMVIGGIIFNLGH-I---L-AKPL-KKYAILLNILPGLMW-GIGNFF 227 (290)
T ss_pred HHHHHHHHHHHHHHHHc---CCCcceehhHHHHHHHHHHHHHHHHH-h---c-ccch-HHHHHHHHHHHHHHH-HHHHHH
Confidence 46788999999999975 37888886665542 222222211 1 1 1222 333444556688885 999999
Q ss_pred HHHhhc-ccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchh----hHHHHHhhhhheee
Q 019712 79 AITGIK-YSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKI----LGTVVSIAGAFIVS 139 (337)
Q Consensus 79 ~~~al~-~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~----~g~~l~~~Gv~li~ 139 (337)
|+.+.+ +.+++.++++.+..|+...+.+++++||+.+++ ++ +|.++.+.|+.++.
T Consensus 228 y~~~~~~~~~~~~~~~ls~~~pvia~~~~v~~l~E~~~~~------~~~~~~iG~~lIi~~~~l~~ 287 (290)
T TIGR00776 228 YLFSAQPKVGVATSFSLSQLGVIISTLGGILILGEKKTKR------EMIAISVGIILIIIAANILG 287 (290)
T ss_pred HHHHcccccchhhHHHHHHHHHHHHHHHHHHHhccCCCcc------eeehhHHHHHHHHHHHHHHh
Confidence 999999 999999999999999999999999999999999 99 99999999988763
No 65
>PF06027 DUF914: Eukaryotic protein of unknown function (DUF914); InterPro: IPR009262 This family consists of several hypothetical proteins of unknown function. Some of the sequences in this family are annotated as putative membrane proteins.
Probab=98.21 E-value=3.6e-05 Score=70.11 Aligned_cols=133 Identities=16% Similarity=0.047 Sum_probs=103.9
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCC--ccCHHHHHHHHHHHHHHHHHHHH
Q 019712 1 MALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGP--VLTFSLLCKFFMLGVLGICLVQI 77 (337)
Q Consensus 1 ml~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~--~~~~~~~~~~~~~g~l~~~~~~~ 77 (337)
++++++++|...++-+... ++.++.++...--+.+.++..+ +... +++... +++.+....++..+++ ....+.
T Consensus 173 ~l~~a~lya~~nV~~E~~v-~~~~~~~~lg~~Glfg~ii~~iq~~il--e~~~i~~~~w~~~~~~~~v~~~~~-lf~~y~ 248 (334)
T PF06027_consen 173 ALLGAILYAVSNVLEEKLV-KKAPRVEFLGMLGLFGFIISGIQLAIL--ERSGIESIHWTSQVIGLLVGYALC-LFLFYS 248 (334)
T ss_pred HHHHHHHHHHHHHHHHHhc-ccCCHHHHHHHHHHHHHHHHHHHHHhe--ehhhhhccCCChhhHHHHHHHHHH-HHHHHH
Confidence 3678999999999999987 7889999888888888888887 6655 554443 3344444433334444 466667
Q ss_pred HHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeeccC
Q 019712 78 FAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKG 143 (337)
Q Consensus 78 ~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~ 143 (337)
+.-..+++.+++...+=..+..+++.+++.+++|+++++. .++|.++.++|.++....+.
T Consensus 249 l~p~~l~~ssAt~~nLsLLTsd~~ali~~i~~f~~~~~~l------y~~af~lIiiG~vvy~~~~~ 308 (334)
T PF06027_consen 249 LVPIVLRMSSATFFNLSLLTSDFYALIIDIFFFGYKFSWL------YILAFALIIIGFVVYNLAES 308 (334)
T ss_pred HHHHHHHhCccceeehHHHHhhHHHHHHHHHhcCccccHH------HHHHHHHHHHHhheEEccCC
Confidence 7778889999988888778899999999999999999999 99999999999998754443
No 66
>PF08449 UAA: UAA transporter family; InterPro: IPR013657 This family includes transporters with a specificity for UDP-N-acetylglucosamine []. ; GO: 0055085 transmembrane transport
Probab=98.08 E-value=7e-05 Score=68.04 Aligned_cols=132 Identities=12% Similarity=0.139 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhhhCC-C--hhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHH
Q 019712 180 SSATWKIFQAAVLKEYP-D--KINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWC 256 (337)
Q Consensus 180 ~~a~~~i~~k~~~~~~~-~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 256 (337)
++..+.+.+++..++.. . +..+.+.++....+...+.......+ .. +...+......++ ...++..+.+.+
T Consensus 11 ~~~~~g~~qE~i~~~~~~~~~~~~lt~~q~~~~~~~~~~~~~~~~~~--~~---~~~~~~~~~~~~~-~~~~~~~~~~~a 84 (303)
T PF08449_consen 11 GCCSYGILQEKIMTTPYGSPFPLFLTFVQFAFNALFSFILLSLFKFP--KS---RKIPLKKYAILSF-LFFLASVLSNAA 84 (303)
T ss_pred HHHHHHHHHHHHHcCCCCCcccHHHHHHHHHHHHHHHHHHHHhcccc--CC---CcChHHHHHHHHH-HHHHHHHHHHHH
Confidence 34446677777765543 4 77888888888888777665543311 11 1122333344444 345778899999
Q ss_pred hhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcccccc
Q 019712 257 LQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNMT 317 (337)
Q Consensus 257 l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~~~~ 317 (337)
+++++.....+.....|+..+++++++++++.+..++.+..++.+|+.+....+.+++++.
T Consensus 85 l~~i~~p~~~~~ks~~~i~vmi~~~l~~~k~y~~~~~~~v~li~~Gv~~~~~~~~~~~~~~ 145 (303)
T PF08449_consen 85 LKYISYPTQIVFKSSKPIPVMILGVLILGKRYSRRQYLSVLLITIGVAIFTLSDSSSSSSS 145 (303)
T ss_pred HHhCChHHHHHHhhhHHHHHHHHHHHhcCccccHHHHHHHHHHHhhHheeeeccccccccc
Confidence 9999999999999999999999999999999999999999999999999887665544433
No 67
>PRK02971 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF; Provisional
Probab=98.07 E-value=1.3e-05 Score=62.84 Aligned_cols=70 Identities=20% Similarity=0.408 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHH--HhhccccccccCccchhhHHHHHhhhhheee
Q 019712 64 FFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVF--FRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 64 ~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~--~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
++..|+..+.+++.++..+++..+++.+..+.+..++++.+.++. ++||+++.+ +++|+++.+.|++++.
T Consensus 50 ~i~lgl~~~~la~~~w~~aL~~~~ls~Ayp~~sl~~~~v~~~~~~~~~~~E~ls~~------~~iGi~lIi~GV~lv~ 121 (129)
T PRK02971 50 AVLLGLAGYALSMLCWLKALRYLPLSRAYPLLSLSYALVYLAAMLLPWFNETFSLK------KTLGVACIMLGVWLIN 121 (129)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHhc
Confidence 567888888999999999999999999999999999889888885 799999999 9999999999999974
No 68
>KOG4510 consensus Permease of the drug/metabolite transporter (DMT) superfamily [General function prediction only]
Probab=98.01 E-value=2.2e-06 Score=73.52 Aligned_cols=137 Identities=16% Similarity=0.187 Sum_probs=93.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHH
Q 019712 166 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVG 245 (337)
Q Consensus 166 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 245 (337)
...+|..+..++ ..+....++.++..++. |......++.+-.+...|-.+..-.. .+. +.+.. ..+++=|+.+
T Consensus 35 ~p~~gl~l~~vs-~ff~~~~vv~t~~~e~~--p~e~a~~r~l~~mlit~pcliy~~~~--v~g-p~g~R-~~LiLRg~mG 107 (346)
T KOG4510|consen 35 KPNLGLLLLTVS-YFFNSCMVVSTKVLEND--PMELASFRLLVRMLITYPCLIYYMQP--VIG-PEGKR-KWLILRGFMG 107 (346)
T ss_pred CCccCceehhhH-HHHhhHHHhhhhhhccC--hhHhhhhhhhhehhhhheEEEEEeee--eec-CCCcE-EEEEeehhhh
Confidence 445798888888 55666666666655544 55555555544444444433321111 110 01111 1122234433
Q ss_pred HHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 246 TVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 246 ~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
..+....+|++++.+-+.+.++....|+++.++++++++|+.|..+..|..+.+.|++++.+..
T Consensus 108 -~tgvmlmyya~~~mslaDA~vItFssPvft~ifaw~~LkE~~t~~eaL~s~itl~GVVLIvRPp 171 (346)
T KOG4510|consen 108 -FTGVMLMYYALMYMSLADAVVITFSSPVFTIIFAWAFLKEPFTKFEALGSLITLLGVVLIVRPP 171 (346)
T ss_pred -hhHHHHHHHHHhhcchhheEEEEecChHHHHHHHHHHHcCCCcHHHHHHHHHhhheEEEEecCC
Confidence 4667778899999999999999999999999999999999999999999999999999888644
No 69
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=98.00 E-value=3e-05 Score=59.66 Aligned_cols=68 Identities=12% Similarity=0.218 Sum_probs=57.3
Q ss_pred HHHHHHHHHHHHHHhhccCceeeeec-cchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 243 IVGTVIRSSIIAWCLQKKGPVFVALF-KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~s~~-~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
+++-.+++.++..++++.+.+.+=.+ .-+..+.+.+.+++++||++|+.+++|+.+|++|+..+....
T Consensus 37 i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~~~~gi~lIi~GVi~l~l~~ 105 (120)
T PRK10452 37 LVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLMKIAGLTTLVAGIVLIKSGT 105 (120)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHhhcCC
Confidence 34456889999999999988765444 457888999999999999999999999999999999886544
No 70
>COG5006 rhtA Threonine/homoserine efflux transporter [Amino acid transport and metabolism]
Probab=97.99 E-value=7.2e-05 Score=63.90 Aligned_cols=127 Identities=17% Similarity=0.065 Sum_probs=102.1
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAIT 81 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~ 81 (337)
+.+..||+.+.+..|..- +..+.-.-+.+-+.+++++.+|.-.. +. ...-.+++-...-+..|+++..+.+.+-..
T Consensus 154 l~AG~~Wa~YIv~G~r~g-~~~~g~~g~a~gm~vAaviv~Pig~~--~a-g~~l~~p~ll~laLgvavlSSalPYsLEmi 229 (292)
T COG5006 154 LGAGACWALYIVLGQRAG-RAEHGTAGVAVGMLVAALIVLPIGAA--QA-GPALFSPSLLPLALGVAVLSSALPYSLEMI 229 (292)
T ss_pred HHHhHHHHHHHHHcchhc-ccCCCchHHHHHHHHHHHHHhhhhhh--hc-chhhcChHHHHHHHHHHHHhcccchHHHHH
Confidence 357789999999999984 45555555567788888888882222 22 222334555566677889998999999999
Q ss_pred hhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 82 GIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 82 al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
+++..|...-+++.++.|.+.++.++++++|.++.. ||.++...+.+..=.
T Consensus 230 AL~rlp~~~F~~LlSLePa~aAl~G~i~L~e~ls~~------qwlaI~~ViaAsaG~ 280 (292)
T COG5006 230 ALRRLPARTFGTLLSLEPALAALSGLIFLGETLTLI------QWLAIAAVIAASAGS 280 (292)
T ss_pred HHhhCChhHHHHHHHhhHHHHHHHHHHHhcCCCCHH------HHHHHHHHHHHHhcc
Confidence 999999999999999999999999999999999999 999999888877644
No 71
>PF05653 Mg_trans_NIPA: Magnesium transporter NIPA; InterPro: IPR008521 This family consists of several eukaryotic proteins of unknown function.
Probab=97.93 E-value=2.4e-05 Score=70.64 Aligned_cols=121 Identities=18% Similarity=0.179 Sum_probs=89.1
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCccc-ccCcchHHHHHHHHHH
Q 019712 166 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWK-LQPGIQRTAVIYAAIV 244 (337)
Q Consensus 166 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~ 244 (337)
++.+|..+++.++++.+....++|+...+.+. ... . ......+ ..++.+| .|+.
T Consensus 4 ~~~iGv~lav~ss~~~~~g~~lqk~~~~r~~~-~~~------------------~-~~~~~~~~l~~~~W~-----~G~~ 58 (300)
T PF05653_consen 4 DFYIGVLLAVVSSIFIAVGFNLQKKSHLRLPR-GSL------------------R-AGSGGRSYLRRPLWW-----IGLL 58 (300)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHhhc-ccc------------------c-ccchhhHHHhhHHHH-----HHHH
Confidence 46689999999999999999999997666531 000 0 0000000 0011112 2233
Q ss_pred HHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 245 GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
...++..+...++...+++.++.++.+..++..+++..++||+++..++.|++++++|..+......
T Consensus 59 ~~~~g~~~~~~Al~~ap~slv~Plg~~~lv~~~~~a~~~l~e~~~~~~~~G~~l~i~G~~liv~~~~ 125 (300)
T PF05653_consen 59 LMVLGEILNFVALGFAPASLVAPLGALSLVFNAVLARFFLGEKLTRRDIVGCALIILGSVLIVIFAP 125 (300)
T ss_pred HHhcchHHHHHHHHhhhHHHHHHHHhhhhhhHHHHhHHHhcccchHhHHhhHHHHHhhheeeEEeCC
Confidence 3346667778899999999999999999999999999999999999999999999999887765443
No 72
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.80 E-value=0.00011 Score=55.81 Aligned_cols=68 Identities=16% Similarity=0.218 Sum_probs=56.3
Q ss_pred HHHHHHHHHHHHHHhhccCceeeeec-cchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 243 IVGTVIRSSIIAWCLQKKGPVFVALF-KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 243 ~~~~~~~~~~~~~~l~~~~~~~~s~~-~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
+++-.+++.++..++++.+.+.+=.+ .-+..+.+.+.++++|+|++|+.+++|+.+++.|+...+..+
T Consensus 37 ~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~~~~gi~lIi~GVi~l~l~~ 105 (110)
T PRK09541 37 IICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLPAIIGMMLICAGVLVINLLS 105 (110)
T ss_pred HHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHhcCC
Confidence 33456888888999999887665444 456788889999999999999999999999999999986544
No 73
>PF06800 Sugar_transport: Sugar transport protein; InterPro: IPR010651 This is a family of bacterial sugar transporters approximately 300 residues long. Members include glucose uptake proteins [], ribose transport proteins, and several putative and hypothetical membrane proteins probably involved in sugar transport across bacterial membranes.; GO: 0015144 carbohydrate transmembrane transporter activity, 0034219 carbohydrate transmembrane transport, 0016021 integral to membrane
Probab=97.67 E-value=0.00097 Score=58.62 Aligned_cols=114 Identities=16% Similarity=0.122 Sum_probs=81.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeecc-chhHHH
Q 019712 197 DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFK-PLGTAI 275 (337)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~-~~~pv~ 275 (337)
+|.+...-....+.++.+...++..+. ++. +...+..-...|+ .-.+++..++++.++.+.+++..+. -++.+.
T Consensus 11 ~~~~Q~lG~t~Gali~alv~~~~~~p~---~~~-~~~~~~~~~lsG~-~W~iGq~~qf~s~~~~GVS~tmPiStg~QLvg 85 (269)
T PF06800_consen 11 KPANQILGTTIGALIFALVVFLFRQPA---FSM-SGTSFIVAFLSGA-FWAIGQIGQFKSFKKIGVSKTMPISTGLQLVG 85 (269)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCC---cch-HHHHHHHHHHHHH-HHHHHHHHHHHHHHHhcceeeeccchhHHHHH
Confidence 566777777777777776666644322 210 1244444444555 4469999999999999999999988 566777
Q ss_pred HHHHHHHHhCCCCchhhHH----HHHHHHHHHHHHHhccCcccc
Q 019712 276 AVFMAVMFLGETPHLGSLI----GTVVIAFGFYAVIWAQGKESN 315 (337)
Q Consensus 276 ~~~~~~~~~~e~~t~~~~~----G~~lii~g~~~~~~~~~~~~~ 315 (337)
+.++++++|||.-+..+++ +.+++++|+++..++++++++
T Consensus 86 ~sl~gv~~fgEW~~~~~~~~G~~Al~liiiGv~lts~~~~~~~~ 129 (269)
T PF06800_consen 86 TSLIGVLFFGEWTTTTQKIIGFLALVLIIIGVILTSYQDKKSDK 129 (269)
T ss_pred HHHHHHhhcCCCCCcchHHHHHHHHHHHHHHHHHhccccccccc
Confidence 9999999999998877654 778889999888877666543
No 74
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.64 E-value=0.0012 Score=52.48 Aligned_cols=132 Identities=14% Similarity=0.104 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHH
Q 019712 170 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 249 (337)
Q Consensus 170 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (337)
..++++.+...-+.....+.++.++..++....+..+..+.+.........++. .........|+... .|+++ ...
T Consensus 2 ~~lla~~aG~~i~~q~~~N~~L~~~~gs~~~as~i~~~~G~i~~~i~~~~~~~~--~~~~~~~~p~w~~l-GG~lG-~~~ 77 (138)
T PF04657_consen 2 YILLALLAGALIALQAAFNGQLGKALGSPLVASFISFGVGFILLLIILLITGRP--SLASLSSVPWWAYL-GGLLG-VFF 77 (138)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhCccHHHHHHHHHHHHHHHHHHHHHhccc--ccchhccCChHHhc-cHHHH-HHH
Confidence 457888999999999999999888875699999999999999888777766543 22222222333322 44433 455
Q ss_pred HHHHHHHhhccCceeeeecc-chhHHHHHHHHHH----HhCCCCchhhHHHHHHHHHHHHH
Q 019712 250 SSIIAWCLQKKGPVFVALFK-PLGTAIAVFMAVM----FLGETPHLGSLIGTVVIAFGFYA 305 (337)
Q Consensus 250 ~~~~~~~l~~~~~~~~s~~~-~~~pv~~~~~~~~----~~~e~~t~~~~~G~~lii~g~~~ 305 (337)
-.+.....++.+++....+. .-|.+.+.+++.+ .-++++++.+++|.++++.|+.+
T Consensus 78 V~~~~~~vp~lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 78 VLSNIILVPRLGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLRRILGLALMIAGVIL 138 (138)
T ss_pred HHHHHHHhhhhhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHHHHHHHHHHHHHHhC
Confidence 66777888888887665544 4567788888886 23467999999999999999863
No 75
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=97.63 E-value=0.00044 Score=52.41 Aligned_cols=111 Identities=16% Similarity=0.096 Sum_probs=80.7
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 1 MALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 1 ml~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
|+++.++||...++.|... ++.++..-.. |..-... .+++ +++ +.+-=++ .-.+...|+
T Consensus 1 ~l~Vg~~WG~Tnpfik~g~-~~~~~~~~~~-~~~~~~~----~Ll~----------n~~----y~ipf~l-Nq~GSv~f~ 59 (113)
T PF10639_consen 1 LLLVGILWGCTNPFIKRGS-SGLEKVKASL-QLLQEIK----FLLL----------NPK----YIIPFLL-NQSGSVLFF 59 (113)
T ss_pred CeeehHHhcCchHHHHHHH-hhcCCccchH-HHHHHHH----HHHH----------hHH----HHHHHHH-HHHHHHHHH
Confidence 5788999999999999985 6665444431 2111111 1111 122 2222223 467788999
Q ss_pred HhhcccCcchhhhhc-chhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 81 TGIKYSSPTLASAMG-NLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 81 ~al~~~~~~~~~~i~-~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
+.+...+.+.+..+. ++.=++|++.++++.+|..+++ .++|+.+.+.|+.+.
T Consensus 60 ~~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~------~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 60 LLLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRR------TWLGMALILAGVALC 112 (113)
T ss_pred HHHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchh------HHHHHHHHHcCeeee
Confidence 999999999999996 6899999999998888888888 999999999998875
No 76
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.56 E-value=0.00089 Score=50.64 Aligned_cols=64 Identities=13% Similarity=0.100 Sum_probs=57.4
Q ss_pred HHHHHHHHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 69 VLGICLVQIFAITGIKYSSPTLASAMGN-LIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 69 ~l~~~~~~~~~~~al~~~~~~~~~~i~~-~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
+.++..+..+...++++.|.+.+..+.. ..-+.+.+.+++++||+++.. |++|+.+.+.|++.+
T Consensus 42 ~~~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~------~~~gi~lIi~GVi~l 106 (109)
T PRK10650 42 LAAVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRK------GWIGLVLLLAGMVMI 106 (109)
T ss_pred HHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHHHh
Confidence 3335788999999999999999977755 889999999999999999999 999999999999875
No 77
>PRK10452 multidrug efflux system protein MdtJ; Provisional
Probab=97.55 E-value=0.00025 Score=54.59 Aligned_cols=67 Identities=24% Similarity=0.242 Sum_probs=60.1
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchhhhhc-chhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 67 LGVLGICLVQIFAITGIKYSSPTLASAMG-NLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 67 ~g~l~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
..+..+..+..++..++++.|.+.+..+. ...-+.+.+++.+++||+++.. +++|+.+.+.|++.+-
T Consensus 35 ~~i~~~~~sf~~ls~al~~lplsiAYavw~GiG~v~~~~ig~~~f~E~~s~~------~~~gi~lIi~GVi~l~ 102 (120)
T PRK10452 35 LMLVMISLSYIFLSFAVKKIALGVAYALWEGIGILFITLFSVLLFDESLSLM------KIAGLTTLVAGIVLIK 102 (120)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHhh
Confidence 34444688999999999999999998885 5899999999999999999999 9999999999998873
No 78
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.48 E-value=0.00043 Score=51.58 Aligned_cols=66 Identities=18% Similarity=0.291 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHhhccCcee-eeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 245 GTVIRSSIIAWCLQKKGPVF-VALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~-~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
+-.+++.+...++|+++.+. .++..-...+.+.+.++++|+|+.++.+++|..++++|+..++..+
T Consensus 39 ~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~~~~gl~LiiaGvi~Lk~~s 105 (106)
T COG2076 39 GYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLIKLLGLALILAGVIGLKLGS 105 (106)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHHHHHHHHHHHHHHHHhhhcC
Confidence 34588889999999988644 4566667788899999999999999999999999999999887643
No 79
>PRK10650 multidrug efflux system protein MdtI; Provisional
Probab=97.48 E-value=0.0016 Score=49.26 Aligned_cols=63 Identities=16% Similarity=0.232 Sum_probs=53.3
Q ss_pred HHHHHHHHHHHHhhccCceee-eeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 245 GTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~-s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
+..+++.+...++|+.+.+.+ ++..-+..+.+.+.++++++|++|+.+++|+++++.|+...+
T Consensus 44 ~~~~sf~~Ls~al~~lpvgvAYAvW~GiG~v~~~~ig~~~f~e~~~~~~~~gi~lIi~GVi~lk 107 (109)
T PRK10650 44 AVLAAFSALSQAVKGIDLSVAYALWGGFGIAATLAAGWILFGQRLNRKGWIGLVLLLAGMVMIK 107 (109)
T ss_pred HHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHhc
Confidence 445888899999999987543 455557788899999999999999999999999999998764
No 80
>COG2076 EmrE Membrane transporters of cations and cationic drugs [Inorganic ion transport and metabolism]
Probab=97.48 E-value=0.00029 Score=52.44 Aligned_cols=65 Identities=22% Similarity=0.187 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHHhhcccCcchhhhhc-chhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 68 GVLGICLVQIFAITGIKYSSPTLASAMG-NLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 68 g~l~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
...++..++.+.-.|++++|.+.+..+. ....+.+.+.+++++||+++.. +++++.+.+.|++.+
T Consensus 36 ~~v~~~~sf~~Ls~alk~ipvgvAYAiW~GiG~v~~~l~g~~~f~E~l~~~------~~~gl~LiiaGvi~L 101 (106)
T COG2076 36 TIVGYGLSFYLLSLALKTIPLGVAYAIWTGIGIVGTALVGVLLFGESLSLI------KLLGLALILAGVIGL 101 (106)
T ss_pred HHHHHHHHHHHHHHHHhhCchHHHHHHHHHHHHHHHHHHHHHhcCCcCCHH------HHHHHHHHHHHHHHh
Confidence 3344688899999999999999997775 5899999999999999999999 999999999999876
No 81
>PRK09541 emrE multidrug efflux protein; Reviewed
Probab=97.46 E-value=0.00039 Score=52.81 Aligned_cols=67 Identities=16% Similarity=0.227 Sum_probs=59.7
Q ss_pred HHHHHHHHHHHHHHHhhcccCcchhhhhc-chhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 67 LGVLGICLVQIFAITGIKYSSPTLASAMG-NLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 67 ~g~l~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
..+.++.++..++..++++.|.+.+..+. ...-+.+.+++++++||+++.. ++.|+.+.+.|++.+-
T Consensus 35 ~~~~~~~~sf~~l~~al~~ipl~iAYavw~GlG~v~~~l~g~~~f~e~~~~~------~~~gi~lIi~GVi~l~ 102 (110)
T PRK09541 35 GTIICYCASFWLLAQTLAYIPTGIAYAIWSGVGIVLISLLSWGFFGQRLDLP------AIIGMMLICAGVLVIN 102 (110)
T ss_pred HHHHHHHHHHHHHHHHHhhCCchhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHHHh
Confidence 34555688899999999999999998885 5899999999999999999999 9999999999999873
No 82
>PRK13499 rhamnose-proton symporter; Provisional
Probab=97.43 E-value=0.0014 Score=59.96 Aligned_cols=143 Identities=13% Similarity=0.077 Sum_probs=92.3
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHH--HHHH--HHHhhccCC-CcccccCcchHHHHHH
Q 019712 166 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTI--QCAV--VSIIVERNP-SAWKLQPGIQRTAVIY 240 (337)
Q Consensus 166 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i--~~~~--~~~~~~~~~-~~~~~~~~~~~~~~~~ 240 (337)
+...|+++.+++++||+-+.+-+|+ .|+. |-... |. ..+.+ +..| ...+..++. ......+...+..-..
T Consensus 4 ~~~~G~~~~~i~~~~~GS~~~p~K~-~k~w-~wE~~--W~-v~gi~~wl~~~~~~g~~~~~~f~~~~~~~~~~~~~~~~l 78 (345)
T PRK13499 4 AIILGIIWHLIGGASSGSFYAPFKK-VKKW-SWETM--WS-VGGIFSWLILPWLIAALLLPDFWAYYSSFSGSTLLPVFL 78 (345)
T ss_pred hhHHHHHHHHHHHHHhhcccccccc-cCCC-chhHH--HH-HHHHHHHHHHHHHHHHHHhhhHHHHHHhcCHHHHHHHHH
Confidence 3468999999999999999999988 4555 22222 32 22211 1111 112222211 1111123344444444
Q ss_pred HHHHHHHHHHHHHHHHhhccCceeeeecc-chhHHHHHHHHHHHhCCCC---ch----hhHHHHHHHHHHHHHHHhccCc
Q 019712 241 AAIVGTVIRSSIIAWCLQKKGPVFVALFK-PLGTAIAVFMAVMFLGETP---HL----GSLIGTVVIAFGFYAVIWAQGK 312 (337)
Q Consensus 241 ~~~~~~~~~~~~~~~~l~~~~~~~~s~~~-~~~pv~~~~~~~~~~~e~~---t~----~~~~G~~lii~g~~~~~~~~~~ 312 (337)
.|++ -.+++..+..++++.+.+....+. -++-+.+.+++.+++||-. +. .-.+|.+++++|+.+..+...+
T Consensus 79 ~G~~-W~iG~i~~~~s~~~iGvS~~~pIs~Gl~lv~gtL~~~i~~gew~~~~~t~~g~~~~~gv~liliGi~l~s~Ag~~ 157 (345)
T PRK13499 79 FGAL-WGIGGITYGLTMRYLGMSLGIGIAIGITLIVGTLMPPIINGNFDVLLATNGGRMTLLGVLVALIGVAIVGRAGQL 157 (345)
T ss_pred HHHH-HHhhhhhHHHHHHHhhhhhhhhHHHHHHHHHHHHHHHHHccccccccccchHHHHHHHHHHHHHHHHHHHHhhhh
Confidence 5553 358999999999999988776655 4678899999999999765 32 3468999999999999885444
Q ss_pred cc
Q 019712 313 ES 314 (337)
Q Consensus 313 ~~ 314 (337)
++
T Consensus 158 k~ 159 (345)
T PRK13499 158 KE 159 (345)
T ss_pred cc
Confidence 33
No 83
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.43 E-value=0.00068 Score=50.97 Aligned_cols=65 Identities=17% Similarity=0.379 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHHhhccCceee-eeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 244 VGTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~-s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
++-.+++.+...++|+.+.+.+ ++..-+..+.+.+.+++++||++|+.+++|+.+++.|+...+.
T Consensus 37 ~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~~~~gi~lIi~GVv~l~l 102 (105)
T PRK11431 37 TAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPARLLSLALIVAGIIGLKL 102 (105)
T ss_pred HHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHHHHHHHHHHHHhhhc
Confidence 3446888899999999887543 5555577899999999999999999999999999999998754
No 84
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=97.38 E-value=0.0039 Score=49.67 Aligned_cols=139 Identities=12% Similarity=0.075 Sum_probs=91.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHH
Q 019712 168 ALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTV 247 (337)
Q Consensus 168 ~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (337)
....+.++++..+-....-.+.++.+...+|....+..+..+.+.+.......+.. ..+.......|+... .|+++.
T Consensus 4 ~l~ll~~i~aG~~l~~Q~~iN~qL~~~~~spl~As~isf~vGt~~L~~l~l~~~~~-~~~a~~~~~pwW~~~-GG~lGa- 80 (150)
T COG3238 4 YLYLLFAILAGALLPLQAAINGRLARYLGSPLLASLISFLVGTVLLLILLLIKQGH-PGLAAVASAPWWAWI-GGLLGA- 80 (150)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHhcCC-CchhhccCCchHHHH-ccchhh-
Confidence 35778889999999999999999888776789999999999888877776664332 222222222333322 233332
Q ss_pred HHHHHHHHHhhccCc-eeeeeccchhHHHHHHHHHHHhC----CCCchhhHHHHHHHHHHHHHHHhc
Q 019712 248 IRSSIIAWCLQKKGP-VFVALFKPLGTAIAVFMAVMFLG----ETPHLGSLIGTVVIAFGFYAVIWA 309 (337)
Q Consensus 248 ~~~~~~~~~l~~~~~-~~~s~~~~~~pv~~~~~~~~~~~----e~~t~~~~~G~~lii~g~~~~~~~ 309 (337)
+--+.-.....+.++ ......-.-+.+.+++++.+=+. .+++..++.|.+++++|+++..+.
T Consensus 81 ~~vt~s~~l~p~lGa~~t~~l~i~gQli~glliD~fG~~g~~~~~~~~~r~lgi~L~l~gil~~~~~ 147 (150)
T COG3238 81 IFVTSSILLAPRLGAATTIALVIAGQLIMGLLIDHFGWFGVPKRPLNLPRILGILLVLAGILLARRF 147 (150)
T ss_pred hhhhhhHHhccchhHHHHHHHHHHHHHHHHHHHHhhcccCCCcCCCCHHHHHHHHHHHHHHHHhccc
Confidence 222222233455554 44455556677888888877554 579999999999999996655543
No 85
>PRK11431 multidrug efflux system protein; Provisional
Probab=97.36 E-value=0.00082 Score=50.52 Aligned_cols=64 Identities=13% Similarity=0.052 Sum_probs=58.1
Q ss_pred HHHHHHHHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 69 VLGICLVQIFAITGIKYSSPTLASAMGN-LIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 69 ~l~~~~~~~~~~~al~~~~~~~~~~i~~-~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
+.++..+..+...+++.+|.+.+..+.. ...+.+.+++++++||+++.. +++|+.+.+.|++.+
T Consensus 36 i~~~~~sf~~Ls~al~~ip~gvaYAvW~GiG~v~~~lig~~~f~e~~~~~------~~~gi~lIi~GVv~l 100 (105)
T PRK11431 36 VTAMIVSMALLAWAMKSLPVGTAYAVWTGIGAVGAAITGIVLLGESASPA------RLLSLALIVAGIIGL 100 (105)
T ss_pred HHHHHHHHHHHHHHHhhCCcHhHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHHHHHHHHHHHHhh
Confidence 4446888999999999999999977755 899999999999999999999 999999999999986
No 86
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=97.23 E-value=0.15 Score=46.17 Aligned_cols=291 Identities=15% Similarity=0.107 Sum_probs=157.5
Q ss_pred hhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCC----CCccCHHHHHHHHHHHHHHHHHHHH
Q 019712 3 LVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSK----GPVLTFSLLCKFFMLGVLGICLVQI 77 (337)
Q Consensus 3 ~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~----~~~~~~~~~~~~~~~g~l~~~~~~~ 77 (337)
+..++-|...+-.|.. ++.+=...-.+...++. +..| .+..- .-.+ ....+.+......+.|++- ..+..
T Consensus 14 iGg~~~~sfy~P~kkv--k~WsWEs~Wlv~gi~sw-li~P~~~a~l-~ip~~~~i~~~~~~~~l~~~~l~G~lW-GIGgl 88 (344)
T PF06379_consen 14 IGGFASGSFYVPFKKV--KGWSWESYWLVQGIFSW-LIVPWLWALL-AIPDFFSIYSATPASTLFWTFLFGVLW-GIGGL 88 (344)
T ss_pred HHHHHhhhhccchhhc--CCccHHHHHHHHHHHHH-HHHHHHHHHH-hCCcHHHHHHhCChhHHHHHHHHHHHH-hcchh
Confidence 3455566666666666 45543333333333333 3344 22110 1111 1233455677778899997 89999
Q ss_pred HHHHhhcccCcchhhhh-cchhHHHHHHHHHHHhhcccc-ccccCccchhhHHHHHhhhhheeeeccCCCCCCCCCCCCC
Q 019712 78 FAITGIKYSSPTLASAM-GNLIPGITFLLAVFFRMEKVA-IRSRSSQAKILGTVVSIAGAFIVSLYKGPPLLGFSSPSNS 155 (337)
Q Consensus 78 ~~~~al~~~~~~~~~~i-~~~~pv~~~ll~~~~~~e~~~-~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~ 155 (337)
.|-.+++|+..+...-+ ..+..++-.++-.++.++--. ..++.++..++|++++++|+.+.... +..-+ .
T Consensus 89 tfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~A-G~~Ke-------~ 160 (344)
T PF06379_consen 89 TFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKA-GSMKE-------K 160 (344)
T ss_pred hHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHH-HHhhh-------h
Confidence 99999999998887544 557777777776666443211 11334556899999999999987422 21100 0
Q ss_pred CCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHh------hhCC-ChhHH----HHHHHHHHHHHHHHHHHhh---c
Q 019712 156 NIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVL------KEYP-DKINL----VFFSCFFGTIQCAVVSIIV---E 221 (337)
Q Consensus 156 ~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~------~~~~-~~~~~----~~~~~~~~~i~~~~~~~~~---~ 221 (337)
+.. ...++.+..+|.++++++.+..|+++.-...-. .+.. ++... ....+..+.+.-+...++. .
T Consensus 161 ~~~-~~~~efn~~kGl~iAv~sGv~Sa~fn~g~~ag~pi~~~a~a~G~~~l~~~l~~~vvv~~GGf~tN~~yc~~~l~~~ 239 (344)
T PF06379_consen 161 ELG-EEAKEFNFKKGLIIAVLSGVMSACFNFGLDAGKPIHEAAVAAGVNPLYANLPVYVVVLWGGFITNLIYCLILLAKN 239 (344)
T ss_pred hhc-cchhhhhhhhhHHHHHHHHHHHHHHHHHHHcCCcHHHHHHHcCCCcHHHhCchhhhhhhhHHHHHHHHHHHHHhhc
Confidence 000 113345666899999999999999888754321 1110 12111 1122222233223332222 1
Q ss_pred cCCC---cccccCcchHHHHHHHHHHHH--HHHHHHHHHHhhccCc----eeeeeccchhHHHHHHHHHHHhCCC-----
Q 019712 222 RNPS---AWKLQPGIQRTAVIYAAIVGT--VIRSSIIAWCLQKKGP----VFVALFKPLGTAIAVFMAVMFLGET----- 287 (337)
Q Consensus 222 ~~~~---~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~----~~~s~~~~~~pv~~~~~~~~~~~e~----- 287 (337)
.+.. ......+......++..+.+. ...+.+|..+-.+.+. .--.+.+.+..+++-+++.+ ++|.
T Consensus 240 k~~s~~~d~~~~~~~~~~N~~~~aLaG~lWy~qfffYg~G~s~lg~~~~~~sW~i~ma~~vl~snvwGl~-lkEWKg~s~ 318 (344)
T PF06379_consen 240 KNWSWKGDYSVAKPPLLKNYLFCALAGVLWYSQFFFYGMGESKLGASGPFSSWAIHMALIVLFSNVWGLI-LKEWKGASK 318 (344)
T ss_pred CCCccccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccHHHHHHHHHHHHHHHHHHHH-HHHhccCCc
Confidence 2221 111111111222222222222 3455555566556653 33456677788899999966 6663
Q ss_pred -CchhhHHHHHHHHHHHHHHHh
Q 019712 288 -PHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 288 -~t~~~~~G~~lii~g~~~~~~ 308 (337)
.-...+.|+++++.++.++-+
T Consensus 319 kt~~vl~~G~~vlI~s~~ivG~ 340 (344)
T PF06379_consen 319 KTIRVLVLGIAVLILSVVIVGY 340 (344)
T ss_pred ccHHHHHHHHHHHHHHHHHHhc
Confidence 334457888888888876644
No 87
>PF04142 Nuc_sug_transp: Nucleotide-sugar transporter; InterPro: IPR007271 This family of membrane proteins transport nucleotide sugars from the cytoplasm into golgi vesicles. P78382 from SWISSPROT transports CMP-sialic acid, P78381 from SWISSPROT transports UDP-galactose and Q9Y2D2 from SWISSPROT transports UDP-GlcNAc. This family has some but not complete overlap with the UDP-galactose transporter family IPR004689 from INTERPRO.; GO: 0005351 sugar:hydrogen symporter activity, 0008643 carbohydrate transport, 0000139 Golgi membrane, 0016021 integral to membrane
Probab=97.20 E-value=0.00088 Score=58.68 Aligned_cols=67 Identities=10% Similarity=0.159 Sum_probs=61.3
Q ss_pred HHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 247 VIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 247 ~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
.+...+.+.++++.+|+...+...++.+++.++++++++++++..||.+..+..+|+.+........
T Consensus 28 ~~qn~L~~~al~~ld~~t~qvl~q~kIl~TAl~s~~~L~r~ls~~qW~aL~lL~~Gv~lv~~~~~~~ 94 (244)
T PF04142_consen 28 AIQNNLQFVALSYLDPSTFQVLSQSKILFTALFSVLLLKRRLSRRQWLALFLLVAGVVLVQLSSSQS 94 (244)
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHhhHHHHHHHHHHHHHHcccchhhHHHHHHHHHHHheeecCCccc
Confidence 4677888899999999999999999999999999999999999999999999999999887665544
No 88
>PF04657 DUF606: Protein of unknown function, DUF606; InterPro: IPR006750 This family contains uncharacterised bacterial proteins.
Probab=97.04 E-value=0.007 Score=48.08 Aligned_cols=119 Identities=18% Similarity=0.198 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHhCCC-ChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcc
Q 019712 8 EVGMITLGKAAMSSGM-SNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKY 85 (337)
Q Consensus 8 wg~~~~~~k~~~~~~~-~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~ 85 (337)
-+....+.... ++.. +|+.-+++-+..+.+.+.. .... +++.....+. .-++...-|+++ .....+.......
T Consensus 13 i~~q~~~N~~L-~~~~gs~~~as~i~~~~G~i~~~i~~~~~--~~~~~~~~~~-~p~w~~lGG~lG-~~~V~~~~~~vp~ 87 (138)
T PF04657_consen 13 IALQAAFNGQL-GKALGSPLVASFISFGVGFILLLIILLIT--GRPSLASLSS-VPWWAYLGGLLG-VFFVLSNIILVPR 87 (138)
T ss_pred HHHHHHHHHHH-HHHhCccHHHHHHHHHHHHHHHHHHHHHh--cccccchhcc-CChHHhccHHHH-HHHHHHHHHHhhh
Confidence 33444444444 2444 4999999999999999988 5555 3322222222 223455578887 8888999999999
Q ss_pred cCcchhhhhcch-hHHHHHHHHHH----HhhccccccccCccchhhHHHHHhhhhhe
Q 019712 86 SSPTLASAMGNL-IPGITFLLAVF----FRMEKVAIRSRSSQAKILGTVVSIAGAFI 137 (337)
Q Consensus 86 ~~~~~~~~i~~~-~pv~~~ll~~~----~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 137 (337)
.+++.+..+.-+ +-+...++..+ .-|++++.+ |++|+.+.+.|+.+
T Consensus 88 lG~~~~~~l~~~GQl~~sl~iD~fG~fg~~~~~~~~~------r~lG~~l~i~Gv~L 138 (138)
T PF04657_consen 88 LGAALTTILIVAGQLIASLLIDHFGLFGAPKRPFSLR------RILGLALMIAGVIL 138 (138)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHccccCCCCCCCCHH------HHHHHHHHHHHHhC
Confidence 999998877654 55666777775 477888888 99999999999864
No 89
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=97.02 E-value=0.0038 Score=45.98 Aligned_cols=55 Identities=24% Similarity=0.367 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhhccCceee-eeccchhHHHHHHHHHHHhCCCCchhhHHHHHHH
Q 019712 245 GTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVI 299 (337)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~-s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~li 299 (337)
+-.+++.++.+++++.+.+.+ .+..-+..+...+.+.+++||++|+.+++|+.+|
T Consensus 38 ~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~~~~gi~lI 93 (93)
T PF00893_consen 38 GYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLSKWLGIGLI 93 (93)
T ss_dssp HHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------HHHHHHH
T ss_pred HHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHHHHhheeeC
Confidence 456888999999999998877 4445588999999999999999999999999876
No 90
>PF00893 Multi_Drug_Res: Small Multidrug Resistance protein; InterPro: IPR000390 Members of this family which have been characterised, belong to the small multidrug resistance (Smr) protein family and are integral membrane proteins. They confer resistance to a wide range of toxic compounds by removing them for the cells. The efflux is coupled to an influx of protons. An example is Escherichia coli mvrC P23895 from SWISSPROT which prevents the incorporation of methyl viologen into cells [] and is involved in ethidium bromide efflux [].; GO: 0016021 integral to membrane; PDB: 2I68_A.
Probab=96.92 E-value=0.0025 Score=46.94 Aligned_cols=57 Identities=28% Similarity=0.233 Sum_probs=35.5
Q ss_pred HHHHHHHHHHHHHHhhcccCcchhhhhc-chhHHHHHHHHHHHhhccccccccCccchhhHHHH
Q 019712 68 GVLGICLVQIFAITGIKYSSPTLASAMG-NLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVV 130 (337)
Q Consensus 68 g~l~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l 130 (337)
.+..+..+..++..++++.|.+.+..+. .+..+.+.+.+.+++||+++.. |+.|+.+
T Consensus 35 ~~~~~~~s~~~l~~al~~lp~~vaYavw~g~g~v~~~~~~~~~f~E~~s~~------~~~gi~l 92 (93)
T PF00893_consen 35 AVVGYGLSFYFLSLALKKLPLSVAYAVWTGLGIVGVTLVGVFFFGESLSLS------KWLGIGL 92 (93)
T ss_dssp HHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHH--------------HHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcchHHHHHHHHHHHHHHHHHHHHHHhCCCCCHH------HHhheee
Confidence 3434688889999999999999997765 5999999999999999999999 9999876
No 91
>COG4975 GlcU Putative glucose uptake permease [Carbohydrate transport and metabolism]
Probab=96.69 E-value=0.0013 Score=56.24 Aligned_cols=132 Identities=9% Similarity=-0.010 Sum_probs=89.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHH
Q 019712 170 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 249 (337)
Q Consensus 170 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (337)
..+.+++=++.|+.......+.. .+|.+...-..+.+.++.+.+.++..++. +...+..-...|. .-.++
T Consensus 3 ~~liaL~P~l~WGsip~v~~k~G---G~p~qQ~lGtT~GALifaiiv~~~~~p~~------T~~~~iv~~isG~-~Ws~G 72 (288)
T COG4975 3 DLLIALLPALGWGSIPLVANKFG---GKPYQQTLGTTLGALIFAIIVFLFVSPEL------TLTIFIVGFISGA-FWSFG 72 (288)
T ss_pred hHHHHHHHHHHhcccceeeeecC---CChhHhhhhccHHHHHHHHHHheeecCcc------chhhHHHHHHhhh-Hhhhh
Confidence 56788888999998777754421 14666666666666666666555432211 2122222222333 33488
Q ss_pred HHHHHHHhhccCceeeeeccc-hhHHHHHHHHHHHhCCCCchhhH----HHHHHHHHHHHHHHhccC
Q 019712 250 SSIIAWCLQKKGPVFVALFKP-LGTAIAVFMAVMFLGETPHLGSL----IGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 250 ~~~~~~~l~~~~~~~~s~~~~-~~pv~~~~~~~~~~~e~~t~~~~----~G~~lii~g~~~~~~~~~ 311 (337)
+..++++.+..+.+++..+.+ .+.+-+.+++++.|||..++.+. +..++++.|+++-.++++
T Consensus 73 Q~~Qfka~~~iGVSkamPiStG~QLVg~sL~gV~~f~EW~t~~~~IlG~iAliliviG~~lTs~~~~ 139 (288)
T COG4975 73 QANQFKAIQLIGVSKAMPISTGMQLVGTSLFGVFVFHEWTTPTQIILGFIALILIVIGIYLTSKQDR 139 (288)
T ss_pred hhhhhhheeeeeeeccccccchhhHhhceeeeEEEEeccCcchhHHHHHHHHHHHHHhheEeeeecc
Confidence 899999999999999988876 56788899999999999999875 456677778776665554
No 92
>KOG1441 consensus Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter [Carbohydrate transport and metabolism; Amino acid transport and metabolism]
Probab=96.56 E-value=0.0015 Score=59.01 Aligned_cols=110 Identities=20% Similarity=0.253 Sum_probs=83.1
Q ss_pred HHHHHHHHHHHhh--hCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHHHhh
Q 019712 181 SATWKIFQAAVLK--EYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAWCLQ 258 (337)
Q Consensus 181 ~a~~~i~~k~~~~--~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 258 (337)
....++..|+..+ +.+-|++....+..++.+..+....+...+.... .+...+..++.+|++. .++..+-+.+++
T Consensus 29 ~v~~~~~nK~il~~~~f~~p~~lt~~~~~~~~l~~~v~~~l~~~~~~~~--~~~~~~~~llpl~~~~-~~~~v~~n~Sl~ 105 (316)
T KOG1441|consen 29 SVGVIILNKYILSKYGFPFPITLTMLHLFCGALALLVIKVLKLVPPSKI--SSKLPLRTLLPLGLVF-CISHVLGNVSLS 105 (316)
T ss_pred heeeEEeeHhhhccCCCCCccHHHHHHHHHHHHHHHHHHHhcCCCCCcc--ccccchHHHHHHHHHH-HHHHHhcchhhh
Confidence 3345666888888 5556888888877777777766655443332222 1335567777778755 588899999999
Q ss_pred ccCceeeeeccchhHHHHHHHHHHHhCCCCchhhH
Q 019712 259 KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSL 293 (337)
Q Consensus 259 ~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~ 293 (337)
+.+.+.+..+..++|+++.++++++.+|+.+...+
T Consensus 106 ~v~VsF~q~iKa~~P~~tvl~~~~~~~~~~s~~~~ 140 (316)
T KOG1441|consen 106 YVPVSFYQTIKALMPPFTVLLSVLLLGKTYSSMTY 140 (316)
T ss_pred ccchhHHHHHHhhcchhHHHHHHHHhCCCCcceEE
Confidence 99999999999999999999999999999887553
No 93
>KOG2234 consensus Predicted UDP-galactose transporter [Carbohydrate transport and metabolism]
Probab=96.48 E-value=0.25 Score=44.84 Aligned_cols=144 Identities=13% Similarity=0.081 Sum_probs=94.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCC---ChhHHHHHHHHHHHHHHHHHHHhhccC-CCccc-------ccCcchHHH
Q 019712 169 LGGLLLTVTCFSSATWKIFQAAVLKEYP---DKINLVFFSCFFGTIQCAVVSIIVERN-PSAWK-------LQPGIQRTA 237 (337)
Q Consensus 169 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~---~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~~~~-------~~~~~~~~~ 237 (337)
.=.+..+...+-++......|+..++.. .+.+..+..-+.-.+++....+..++. ...+. ...+.+...
T Consensus 15 ~k~~~l~~~t~~~~~l~l~l~ys~~~~~~~f~~tt~v~~~Ei~Kl~~c~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~lk 94 (345)
T KOG2234|consen 15 MKYLSLIVLTAQNTALTLLLRYSRTREKPMFLPTTAVFLTEVIKLVFCLFLLLFEERKYAKKSLKSLSKEILAAPRETLK 94 (345)
T ss_pred HHHHHHHHHHHHHhhHHHHHHHHhcCCCCCcchhHHHHHHHHHHHHHHHHHHHHHhhHHhhhhhhhcCHHHHhChHHHHH
Confidence 3344555566666677777666543331 467777777776666666555543211 01110 111112222
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 238 VIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 238 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
+..-+.+- .+-.-+++.++.+.+|++..+...+....+.++.+++++++.+.+||...++...|+.+.+.....+
T Consensus 95 ~~vPa~iY-alqNnl~yval~~ldaatyqVt~qlKI~tTA~f~vl~L~rkLs~~Qw~Al~lL~~Gv~~vQ~~~~~~ 169 (345)
T KOG2234|consen 95 VSVPALIY-ALQNNLQYVALSNLDAATYQVTYQLKILTTAIFSVLILRRKLSRLQWMALVLLFAGVALVQLPSLSP 169 (345)
T ss_pred HHHHHHHH-HHhhhHHHHHHhcCCchhhhhhhhHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHHHHHHhccCCCC
Confidence 22222222 2444578899999999999999999999999999999999999999999999999999998544433
No 94
>PF10639 UPF0546: Uncharacterised protein family UPF0546; InterPro: IPR018908 This family of proteins has no known function. Many members are annotated as potential transmembrane proteins.
Probab=96.28 E-value=0.013 Score=44.42 Aligned_cols=109 Identities=8% Similarity=-0.012 Sum_probs=75.1
Q ss_pred HHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHHHHHHHH
Q 019712 176 VTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIRSSIIAW 255 (337)
Q Consensus 176 ~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 255 (337)
+-++.|++.+-+.||..+..++.... . +..-.... ++. .++ ..+ .......+...|++
T Consensus 3 ~Vg~~WG~Tnpfik~g~~~~~~~~~~-~-~~~~~~~~-----Ll~----------n~~---y~i--pf~lNq~GSv~f~~ 60 (113)
T PF10639_consen 3 LVGILWGCTNPFIKRGSSGLEKVKAS-L-QLLQEIKF-----LLL----------NPK---YII--PFLLNQSGSVLFFL 60 (113)
T ss_pred eehHHhcCchHHHHHHHhhcCCccch-H-HHHHHHHH-----HHH----------hHH---HHH--HHHHHHHHHHHHHH
Confidence 35788999999999987766422111 1 21111111 100 111 111 22234577788899
Q ss_pred HhhccCceeeeecc-chhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q 019712 256 CLQKKGPVFVALFK-PLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAV 306 (337)
Q Consensus 256 ~l~~~~~~~~s~~~-~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~ 306 (337)
.+.+.+.+.+..+. .+.-+++.+.++++.+|..++..++|++++++|+.++
T Consensus 61 ~L~~~dlSlavPi~Nsl~fvfT~l~g~~lge~~~~~~~~~G~~Li~~Gv~Lc 112 (113)
T PF10639_consen 61 LLGSADLSLAVPIANSLAFVFTALTGWLLGEEVISRRTWLGMALILAGVALC 112 (113)
T ss_pred HHhcCCceeeehHHhHHHHHHHHHHHHHhcCcccchhHHHHHHHHHcCeeee
Confidence 99999999999985 8889999999988888888999999999999998653
No 95
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=96.13 E-value=0.099 Score=45.83 Aligned_cols=181 Identities=12% Similarity=-0.037 Sum_probs=110.0
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
+++++++|.+++-.|.. +..|++.+-++......+.-+. .+.. ..++ -+.+.++-|.+- +.++.+-.
T Consensus 6 ~va~~~fGs~~vPvK~~--~~gDg~~fQw~~~~~i~~~g~~v~~~~-----~~p~----f~p~amlgG~lW-~~gN~~~v 73 (254)
T PF07857_consen 6 IVAVLFFGSNFVPVKKF--DTGDGFFFQWVMCSGIFLVGLVVNLIL-----GFPP----FYPWAMLGGALW-ATGNILVV 73 (254)
T ss_pred HHHHHHhcccceeeEec--cCCCcHHHHHHHHHHHHHHHHHHHHhc-----CCCc----ceeHHHhhhhhh-hcCceeeh
Confidence 46789999999999987 4568887777765555554444 3222 2222 234456666775 88999999
Q ss_pred HhhcccCcchhhhhcchhHHHH-HHHHHH-HhhccccccccCccchhhHHHHHhhhhheeeeccCCCCC------C---C
Q 019712 81 TGIKYSSPTLASAMGNLIPGIT-FLLAVF-FRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYKGPPLL------G---F 149 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~~~pv~~-~ll~~~-~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~~~~~~------~---~ 149 (337)
-.++.+..+....+.++.-..+ -..+++ +++++.+..+ .-.-.++|++++++|..+...-+.+... . .
T Consensus 74 pii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~-~~~Ln~~G~~l~~~~~~~f~fik~~~~~~~~~~~~~~~~ 152 (254)
T PF07857_consen 74 PIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPS-SPWLNYIGVALVLVSGIIFSFIKSEEKEPKKSSEETPLS 152 (254)
T ss_pred hHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccc-hhHHHHHHHHHHHHHHHheeeecCCCCCccccccccccc
Confidence 9999999999999988755544 444443 3444332210 0122578888888887776543332210 0 0
Q ss_pred CC-CCCCCCC-----CCCC-----CcchhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 019712 150 SS-PSNSNIQ-----LPVS-----EYSNWALGGLLLTVTCFSSATWKIFQAAVLKEY 195 (337)
Q Consensus 150 ~~-~~~~~~~-----~~~~-----~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~ 195 (337)
.+ ..+.+++ ++.. ...+...|..+++.+++.|+...+=..+..++.
T Consensus 153 ~~~~~~~~~~~~~~~~~S~vd~l~~~~~RivG~~LAv~aGvlyGs~fvPv~Yi~~~~ 209 (254)
T PF07857_consen 153 IEDVIEIEDDSENSEDSSWVDELSPRKKRIVGIILAVFAGVLYGSNFVPVIYIQDHP 209 (254)
T ss_pred cccccccccccccccccccccccccccchhHhHHHHHHHHHHHhcccchHHHHHhCc
Confidence 00 0000010 0111 112467899999999999999877777754443
No 96
>PF07857 DUF1632: CEO family (DUF1632); InterPro: IPR012435 These sequences are found in hypothetical eukaryotic proteins of unknown function. The region concerned is approximately 280 residues long.
Probab=95.79 E-value=0.02 Score=50.15 Aligned_cols=132 Identities=12% Similarity=0.061 Sum_probs=73.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHH
Q 019712 170 GGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR 249 (337)
Q Consensus 170 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (337)
|.+.+++|+++++-..+=.|+. +.. |......+++....+......++.+.+. .+ + +.+ ..|. .-..+
T Consensus 1 G~~a~~va~~~fGs~~vPvK~~-~~g-Dg~~fQw~~~~~i~~~g~~v~~~~~~p~-f~---p----~am-lgG~-lW~~g 68 (254)
T PF07857_consen 1 GYIACIVAVLFFGSNFVPVKKF-DTG-DGFFFQWVMCSGIFLVGLVVNLILGFPP-FY---P----WAM-LGGA-LWATG 68 (254)
T ss_pred CchhHHHHHHHhcccceeeEec-cCC-CcHHHHHHHHHHHHHHHHHHHHhcCCCc-ce---e----HHH-hhhh-hhhcC
Confidence 5677888999999888887764 333 6777777777766666666665443221 11 1 111 1111 11123
Q ss_pred HHHHHHHhhccCceeeeeccc-hhHHHHHHHHHH-HhCCC-----CchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 250 SSIIAWCLQKKGPVFVALFKP-LGTAIAVFMAVM-FLGET-----PHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 250 ~~~~~~~l~~~~~~~~s~~~~-~~pv~~~~~~~~-~~~e~-----~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
..+-.-.++.++-+..-.+.. .+-+.+...+-+ +||++ -.+..++|.+++++|..++..-|.++
T Consensus 69 N~~~vpii~~iGLglg~liW~s~n~l~Gw~~grfGlFg~~~~~~~~~~Ln~~G~~l~~~~~~~f~fik~~~ 139 (254)
T PF07857_consen 69 NILVVPIIKTIGLGLGMLIWGSVNCLTGWASGRFGLFGLDPQVPSSPWLNYIGVALVLVSGIIFSFIKSEE 139 (254)
T ss_pred ceeehhHhhhhhhHHHHHHHHHHHHHHHHHHhhceeccccccccchhHHHHHHHHHHHHHHHheeeecCCC
Confidence 333333444444333333222 345566665543 55543 34557899999999988887654443
No 97
>KOG2922 consensus Uncharacterized conserved protein [Function unknown]
Probab=95.77 E-value=0.00094 Score=59.29 Aligned_cols=127 Identities=16% Similarity=0.185 Sum_probs=93.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHH
Q 019712 164 YSNWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAI 243 (337)
Q Consensus 164 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 243 (337)
..+..+|..+++.+.+.-+...++.|+..++.. . ... .. .....+.. .-..-+.|+
T Consensus 16 ~~d~~~G~~LaissS~~Ig~sfilkKkgl~r~~-~-----------------~~~-ra-~~gg~~yl----~~~~Ww~G~ 71 (335)
T KOG2922|consen 16 SSDNIIGLVLAISSSIFIGSSFILKKKGLKRAG-A-----------------SGL-RA-GEGGYGYL----KEPLWWAGM 71 (335)
T ss_pred ccCceeeeeehhhccEEEeeehhhhHHHHHHHh-h-----------------hcc-cc-cCCCcchh----hhHHHHHHH
Confidence 344568999999999999999999998776653 1 000 10 11111110 112223455
Q ss_pred HHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCccc
Q 019712 244 VGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKES 314 (337)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~ 314 (337)
+...++-..-+.+....+++.++.++.++.+++.+++..+++|++++...+|+++.++|..++....++++
T Consensus 72 ltm~vGei~NFaAYaFAPasLVtPLGAlsvi~saila~~~L~Ekl~~~g~lGc~l~v~Gst~iV~haP~e~ 142 (335)
T KOG2922|consen 72 LTMIVGEIANFAAYAFAPASLVTPLGALSVIISAILASFFLKEKLNLLGILGCVLCVVGSTTIVIHAPKEQ 142 (335)
T ss_pred HHHHHHhHhhHHHHhhchHhhhccchhHHHHHHHHHHHHHHHHHHHHhhhhheeEEecccEEEEEecCccc
Confidence 55567777777788888999999999999999999999999999999999999999999888776555443
No 98
>KOG1444 consensus Nucleotide-sugar transporter VRG4/SQV-7 [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=95.63 E-value=0.23 Score=44.46 Aligned_cols=134 Identities=16% Similarity=0.142 Sum_probs=88.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhhCCCh--hHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHH
Q 019712 170 GGLLLTVTCFSSATWKIFQAAVLKEYPDK--INLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTV 247 (337)
Q Consensus 170 G~~~~l~a~~~~a~~~i~~k~~~~~~~~~--~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 247 (337)
....++.=+++.....+..|.....++-| .....+|.+.+.+.........--+....+....+-|..+-.+-.
T Consensus 13 ~l~sa~~Y~~sS~lm~vvNK~vls~y~f~~~l~l~~~Q~l~s~~~v~~lk~~~lv~~~~l~~~~~kk~~P~~~lf~---- 88 (314)
T KOG1444|consen 13 PLLSALFYCLSSILMTVVNKIVLSSYNFPMGLLLMLLQSLASVLVVLVLKRLGLVNFRPLDLRTAKKWFPVSLLFV---- 88 (314)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHHHHHHhceeecCCcChHHHHHHccHHHHHH----
Confidence 34445555666666777788888777634 444448888877766555442222222222222233332221111
Q ss_pred HHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 248 IRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
.....-.+++++.+.....++..+.|++..+....++|.+++...+.....+++|.....
T Consensus 89 ~~i~t~~~slk~lnVpm~tv~kn~tii~~ai~E~lf~~~~~~~~v~~Sv~~m~~~s~~~~ 148 (314)
T KOG1444|consen 89 GMLFTGSKSLKYLNVPMFTVFKNLTIILTAIGEVLFFGKRPSNKVWASVFAMIIGSVAAA 148 (314)
T ss_pred HHHHHccccccccCchHHHHHhhchHHHHHHhHHhhcCcCchhhHHHHHHHHHHHHHhhc
Confidence 112233478999999999999999999999999999999999999999999999877654
No 99
>KOG2765 consensus Predicted membrane protein [Function unknown]
Probab=95.49 E-value=0.099 Score=47.69 Aligned_cols=133 Identities=11% Similarity=0.169 Sum_probs=100.6
Q ss_pred chhHHHHHHHHHHHHHHHhCC---CChHHHHHHHHHHHHHHHHH-HHHHhhccCCCC-ccCHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSG---MSNFVYVVYYNALGTFILLH-YFIYNTYRSKGP-VLTFSLLCKFFMLGVLGICLVQ 76 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~---~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~-~~~~~~~~~~~~~g~l~~~~~~ 76 (337)
+++++++|.+.++.|.=..++ +|--.+-.+--++..++++| .++....+..+. -.+..+...++..++++.+++-
T Consensus 253 L~sA~~YavY~vllk~~~~~eg~rvdi~lffGfvGLfnllllwP~l~iL~~~~~e~F~lP~~~q~~~vv~~~ligtvvSD 332 (416)
T KOG2765|consen 253 LLSALLYAVYTVLLKRKIGDEGERVDIQLFFGFVGLFNLLLLWPPLIILDFFGEERFELPSSTQFSLVVFNNLIGTVVSD 332 (416)
T ss_pred HHHHHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHHHhHHHHHHHHhccCcccCCCCceeEeeeHhhHHHHHHHH
Confidence 467899999999999865433 34334444445666777776 444311222222 2234455667788899999999
Q ss_pred HHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeee
Q 019712 77 IFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSL 140 (337)
Q Consensus 77 ~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 140 (337)
.++..|.-.+++-.+++-..++....++...++.+.++++. .++|....+.|.+++..
T Consensus 333 ylW~~a~~lTs~Lv~TlgmSltIPLA~~aD~l~k~~~~S~~------~iiGsi~Ifv~Fv~vn~ 390 (416)
T KOG2765|consen 333 YLWAKAVLLTSPLVVTLGMSLTIPLAMFADVLIKGKHPSAL------YIIGSIPIFVGFVIVNI 390 (416)
T ss_pred HHHHHHHHhccchhheeeeeEeeeHHHHHHHHHcCCCCCHH------HHHHHHHHHHHHhheec
Confidence 99999999999999999999888888999999999999999 99999999999888754
No 100
>PF06379 RhaT: L-rhamnose-proton symport protein (RhaT); InterPro: IPR004673 These proteins are members of the L-Rhamnose Symporter (RhaT) family. This family includes two characterised members, both of which function as L-rhamnose:H+ symporters and have 10 GES predicted transmembrane domains.; GO: 0015153 rhamnose transmembrane transporter activity, 0008645 hexose transport, 0016021 integral to membrane
Probab=95.18 E-value=0.15 Score=46.17 Aligned_cols=148 Identities=12% Similarity=0.106 Sum_probs=90.8
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHH-HHHHHhhccCCC-cccccCcchHHHHHHHHH
Q 019712 166 NWALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQC-AVVSIIVERNPS-AWKLQPGIQRTAVIYAAI 243 (337)
Q Consensus 166 ~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~-~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 243 (337)
+...|+++..+++++.+.+.+-.||. |+. +-.+.-..+.+++-++. ...+++.-++.. -....+...+....+.|+
T Consensus 4 ~ii~Gii~h~iGg~~~~sfy~P~kkv-k~W-sWEs~Wlv~gi~swli~P~~~a~l~ip~~~~i~~~~~~~~l~~~~l~G~ 81 (344)
T PF06379_consen 4 AIILGIIFHAIGGFASGSFYVPFKKV-KGW-SWESYWLVQGIFSWLIVPWLWALLAIPDFFSIYSATPASTLFWTFLFGV 81 (344)
T ss_pred hHHHHHHHHHHHHHHhhhhccchhhc-CCc-cHHHHHHHHHHHHHHHHHHHHHHHhCCcHHHHHHhCChhHHHHHHHHHH
Confidence 45689999999999999999998884 666 34444445555554333 223333333221 112223344444444554
Q ss_pred HHHHHHHHHHHHHhhccCceee-eeccchhHHHHHHHHHHHhCC-------CCchhhHHHHHHHHHHHHHHHhccCcccc
Q 019712 244 VGTVIRSSIIAWCLQKKGPVFV-ALFKPLGTAIAVFMAVMFLGE-------TPHLGSLIGTVVIAFGFYAVIWAQGKESN 315 (337)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~-s~~~~~~pv~~~~~~~~~~~e-------~~t~~~~~G~~lii~g~~~~~~~~~~~~~ 315 (337)
+ =.++...|-.++++++.+.. ++..-+.-+++.++--++.|+ +-....++|.++.++|+.+..+....|++
T Consensus 82 l-WGIGgltfGl~mryLGvSLG~sI~lGl~~~~GTlippi~~g~~~~l~~~~~g~~vL~Gv~v~LiGIai~g~AG~~Ke~ 160 (344)
T PF06379_consen 82 L-WGIGGLTFGLAMRYLGVSLGQSIALGLCAVFGTLIPPIFQGTFDELLATPSGQIVLLGVAVCLIGIAICGKAGSMKEK 160 (344)
T ss_pred H-HhcchhhHhHHHHHHhHHHHHHHHHHHHHHHhhchHHHHcCcccccccCCCchhhhhHHHHHHHHHHHHhHHHHhhhh
Confidence 3 35777888889999886543 344445556666665555442 22345789999999999998886655444
Q ss_pred c
Q 019712 316 M 316 (337)
Q Consensus 316 ~ 316 (337)
+
T Consensus 161 ~ 161 (344)
T PF06379_consen 161 E 161 (344)
T ss_pred h
Confidence 3
No 101
>TIGR00803 nst UDP-galactose transporter. NSTs generally appear to function by antiport mechanisms, exchanging a nucleotide-sugar for a nucleotide. Thus, CMP-sialic acid is exchanged for CMP; GDP-mannose is preferentially exchanged for GMP, and UDP-galactose and UDP-N-acetylglucosamine are exchanged for UMP (or possibly UDP). Other nucleotide sugars (e.g., GDP-fucose, UDP-xylose, UDP-glucose, UDP-N-acetylgalactosamine, etc.) may also be transported in exchange for various nucleotides, but their transporters have not been molecularly characterized. Each compound appears to be translocated by its own transport protein. Transport allows the compound, synthesized in the cytoplasm, to be exported to the lumen of the Golgi apparatus or the endoplasmic reticulum where it is used for the synthesis of glycoproteins and glycolipids.
Probab=94.99 E-value=0.065 Score=46.20 Aligned_cols=65 Identities=18% Similarity=0.208 Sum_probs=57.2
Q ss_pred HHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhe
Q 019712 66 MLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFI 137 (337)
Q Consensus 66 ~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 137 (337)
...+++ .....+....++|.+....+....+.++++.+++.++++|+++.. ++.|+.+.+.|+.+
T Consensus 157 ~~~~~~-a~~~~~v~~vlk~~~~~~~~~~~~~~~~~s~lls~~~f~~~ls~~------~~~g~~lV~~~~~l 221 (222)
T TIGR00803 157 IVGLLN-VGGGLCIGGVVRYADNTTKSFVTALSIILSTLASVRLFDAKISST------FYLGAILVFLATFL 221 (222)
T ss_pred HHHHHH-HhcCceeeehhHHhHHHHHHHHHHHHHHHHHHHHHHHhcCCccHH------HHHHHHHHHeeeEe
Confidence 333443 777888999999999999999999999999999999999999999 99999999988753
No 102
>KOG1580 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=94.93 E-value=0.069 Score=45.54 Aligned_cols=73 Identities=21% Similarity=0.266 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 59 SLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 59 ~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
..|+.+.++++++ ++++.+.+.-..+-++-.-+++..+--.|+.+.+.++++.+++.+ ||+|..+.+.|...=
T Consensus 239 ~~~~~l~l~ai~s-~LGQ~fIF~tv~~FgPLtCSivTTTRKfFTil~SVllf~npls~r------QwlgtvlVF~aL~~D 311 (337)
T KOG1580|consen 239 YVFWDLTLLAIAS-CLGQWFIFKTVEEFGPLTCSIVTTTRKFFTILISVLLFNNPLSGR------QWLGTVLVFSALTAD 311 (337)
T ss_pred HHHHHHHHHHHHH-HhhhHHHHHHHHHhCCeeEEEEeehHHHHHHHHHHHHhcCcCcHH------HHHHHHHHHHHhhhH
Confidence 4567788888987 999999999999999999999999999999999999999999999 999999999987763
No 103
>KOG1581 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=93.87 E-value=1.1 Score=39.94 Aligned_cols=140 Identities=11% Similarity=0.062 Sum_probs=97.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh--------hhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHH
Q 019712 168 ALGGLLLTVTCFSSATWKIFQAAVL--------KEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVI 239 (337)
Q Consensus 168 ~~G~~~~l~a~~~~a~~~i~~k~~~--------~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (337)
+...++...--..+-.+.+++.+.. +++.++....+-+.+.+.++.....-+. ... ......|...-
T Consensus 13 ~~L~~c~~GI~~t~l~~gVlQEki~T~~y~~~~~rF~~~~fL~~~q~l~~~~~s~~~l~~~--k~~---~~~~apl~~y~ 87 (327)
T KOG1581|consen 13 ILLVFCFSGIYATFLTWGVLQEKIMTRPYGEDGERFEHSLFLVFCQRLVALLVSYAMLKWW--KKE---LSGVAPLYKYS 87 (327)
T ss_pred HHHHHHHHHHHHHHHHHHHHhcceeecccCcccccccccHHHHHHHHHHHHHHHHHHHhcc--ccc---CCCCCchhHHh
Confidence 3444444444455556777776653 2234677777778777777774333222 111 11224455555
Q ss_pred HHHHHHHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 240 YAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 240 ~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
++++ ...++-.+.+.++++++--+..+.-.-..+-.++++.++.+.+.++.++.-..+|-+|+.+....+..+
T Consensus 88 ~is~-tn~~s~~~~yeaLKyvSyPtq~LaKscKmIPVmlmg~Lvy~~ky~~~eYl~~~LIs~GvsiF~l~~~s~ 160 (327)
T KOG1581|consen 88 LISF-TNTLSSWCGYEALKYVSYPTQTLAKSCKMIPVMLMGTLVYGRKYSSFEYLVAFLISLGVSIFSLFPNSD 160 (327)
T ss_pred HHHH-HhhcchHHHHHHHHhccchHHHHHHHhhhhHHHHHHHHHhcCccCcHHHHHHHHHHhheeeEEEecCCC
Confidence 5555 445777888999999998888888888888899999999999999999999999999998888776655
No 104
>COG3238 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=93.40 E-value=0.79 Score=36.66 Aligned_cols=106 Identities=19% Similarity=0.178 Sum_probs=68.2
Q ss_pred ChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhc-chhHHH
Q 019712 24 SNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMG-NLIPGI 101 (337)
Q Consensus 24 ~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~-~~~pv~ 101 (337)
+|+.-.+.-+..+.+.+.. .+.+ +++.......+..++...-|+++ +.+-...........++....+. .-+-+.
T Consensus 33 spl~As~isf~vGt~~L~~l~l~~--~~~~~~a~~~~~pwW~~~GG~lG-a~~vt~s~~l~p~lGa~~t~~l~i~gQli~ 109 (150)
T COG3238 33 SPLLASLISFLVGTVLLLILLLIK--QGHPGLAAVASAPWWAWIGGLLG-AIFVTSSILLAPRLGAATTIALVIAGQLIM 109 (150)
T ss_pred ChHHHHHHHHHHHHHHHHHHHHHh--cCCCchhhccCCchHHHHccchh-hhhhhhhHHhccchhHHHHHHHHHHHHHHH
Confidence 5999999999999988887 6555 44443332233334555666666 66666666666666666655543 344445
Q ss_pred HHHHHHHH----hhccccccccCccchhhHHHHHhhhhhee
Q 019712 102 TFLLAVFF----RMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 102 ~~ll~~~~----~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
..++..+= -+++++.. +++|+++.+.|++++
T Consensus 110 glliD~fG~~g~~~~~~~~~------r~lgi~L~l~gil~~ 144 (150)
T COG3238 110 GLLIDHFGWFGVPKRPLNLP------RILGILLVLAGILLA 144 (150)
T ss_pred HHHHHhhcccCCCcCCCCHH------HHHHHHHHHHHHHHh
Confidence 55555443 23566666 999999999996654
No 105
>KOG4314 consensus Predicted carbohydrate/phosphate translocator [General function prediction only]
Probab=92.54 E-value=0.035 Score=45.98 Aligned_cols=65 Identities=12% Similarity=0.155 Sum_probs=58.7
Q ss_pred HHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCc
Q 019712 248 IRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGK 312 (337)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~ 312 (337)
.+...|..++++++++.++.+..-+-.+..+++++++++++...+++..++.+.|++.+.+.+..
T Consensus 65 ~aNY~Yl~AL~~is~s~asai~~CNaAFVfiLa~IVL~D~~~~~kIlaailAI~GiVmiay~DN~ 129 (290)
T KOG4314|consen 65 GANYLYLLALKKISASDASAIFACNAAFVFILAIIVLGDRFMGFKILAAILAIGGIVMIAYADNE 129 (290)
T ss_pred cCCcHHHHHHHhcChhhhHHHHHhhHHHHHHHHHHHhccchhhhhHHHHHHHhCcEEEEEeccch
Confidence 34568889999999999999999999999999999999999999999999999999888775543
No 106
>COG5070 VRG4 Nucleotide-sugar transporter [Carbohydrate transport and metabolism / Posttranslational modification, protein turnover, chaperones / Intracellular trafficking and secretion]
Probab=89.50 E-value=4 Score=34.86 Aligned_cols=109 Identities=20% Similarity=0.226 Sum_probs=86.9
Q ss_pred CCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCC----CccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhhc
Q 019712 21 SGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKG----PVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAMG 95 (337)
Q Consensus 21 ~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~----~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i~ 95 (337)
.+...++..++..+++.++++. -+.. +.... ...+.....+.++.|++. ++-..+.-+.++-++.+..++..
T Consensus 181 tNf~d~dtmfYnNllslPiL~~~s~~~--edws~~n~annl~~d~l~am~ISgl~s-vgiSy~saWcvrVtSSTtySMvG 257 (309)
T COG5070 181 TNFKDFDTMFYNNLLSLPILLSFSFLF--EDWSPGNLANNLSVDSLMAMFISGLCS-VGISYCSAWCVRVTSSTTYSMVG 257 (309)
T ss_pred cccchhhHHHHhhhHHHHHHHHHHHHh--ccCCcchhhcCCChHHHHHHHHHHHHH-hhhhhccceeEeehhhhHHHHHH
Confidence 3667788889999999998887 4444 33221 234555566778888886 77778888999999999999999
Q ss_pred chhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 96 NLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 96 ~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
.+.-.-.++-+.++++|+.++. .+.++++++....+-
T Consensus 258 ALNKlp~alaGlvffdap~nf~------si~sillGflsg~iY 294 (309)
T COG5070 258 ALNKLPIALAGLVFFDAPVNFL------SIFSILLGFLSGAIY 294 (309)
T ss_pred HhhhChHHHhhhhhcCCchhHH------HHHHHHHHHHHHHHH
Confidence 9988888999999999999999 999999988766553
No 107
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=89.35 E-value=2.9 Score=31.02 Aligned_cols=109 Identities=15% Similarity=0.105 Sum_probs=70.6
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCChH------HHHHHHHHHHHHHHHHHHHHhhccCCCCccCHHHHHHHHHHHHHHHHH
Q 019712 1 MALVEIGEVGMITLGKAAMSSGMSNF------VYVVYYNALGTFILLHYFIYNTYRSKGPVLTFSLLCKFFMLGVLGICL 74 (337)
Q Consensus 1 ml~~~~~wg~~~~~~k~~~~~~~~~~------~~~~~r~~~~~i~l~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~ 74 (337)
|+++.++||...++.|... .+.+.. ...++|-.-. -..+++++.. =+++ -.
T Consensus 8 lvaVgllWG~Tnplirrgs-~g~~~v~~~~~k~~~~lqe~~t-----------------l~l~w~Y~iP----FllN-qc 64 (125)
T KOG4831|consen 8 LVAVGLLWGATNPLIRRGS-LGWDKVKSSSRKIMIALQEMKT-----------------LFLNWEYLIP----FLLN-QC 64 (125)
T ss_pred HHHHHHHHccccHHHHHHH-hhHhhccCchHHHHHHHHHHHH-----------------HHHhHHHHHH----HHHH-Hh
Confidence 4577899999999999873 544322 1111111100 0112322222 2233 44
Q ss_pred HHHHHHHhhcccCcchhhhhcc-hhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 75 VQIFAITGIKYSSPTLASAMGN-LIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 75 ~~~~~~~al~~~~~~~~~~i~~-~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
+..+||.-+.+.+.+.+..+.+ +.-.|+.+.+..+..|-...+ .++|..+..+|+.+.
T Consensus 65 gSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~------a~lGt~liv~Gi~Lc 123 (125)
T KOG4831|consen 65 GSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGL------ALLGTSLIVFGIWLC 123 (125)
T ss_pred hHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccce------eehhhhHHhhhhhhe
Confidence 5678889999999999998876 677888888887755555555 789999999998765
No 108
>KOG1443 consensus Predicted integral membrane protein [Function unknown]
Probab=88.22 E-value=3.6 Score=36.89 Aligned_cols=121 Identities=10% Similarity=0.110 Sum_probs=79.5
Q ss_pred HHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCc-ccccCcc-hHHHHHHHHHHHHHHHHHHHHHHhhccCceeee
Q 019712 189 AAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSA-WKLQPGI-QRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVA 266 (337)
Q Consensus 189 k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s 266 (337)
|+..++++=|......+...-...........+..... -...++. ....+.-.|+ ++..=-.+-++++++++.+..+
T Consensus 36 ~~~~~~f~fPLf~ts~h~~v~flfa~~~~~l~~~~~~r~r~~~sw~~~Lr~~aPtal-ata~DIGLSN~sl~yVtlSlYT 114 (349)
T KOG1443|consen 36 KWLTKNFHFPLFVTSLHLAVKFLFAALSRRLYQCSVPRARVVLSWRDYLRRLAPTAL-ATALDIGLSNWSLEYVTLSLYT 114 (349)
T ss_pred hhhhcCcCCchHHHHHHHHHHHHHHHHHHHHHhccCCccccCCcHHHHHHHhhhhhh-hhhcccccccceeeeeeeeeee
Confidence 33344454466666666655555444433333222111 1001112 2222334444 4456677889999999999999
Q ss_pred eccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 267 LFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 267 ~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
+.-...++|-.+++.++-=|++++....-..+|-+|+++..++.
T Consensus 115 M~KSSsi~FIllFs~if~lEk~~w~L~l~v~lI~~Glflft~Ks 158 (349)
T KOG1443|consen 115 MTKSSSILFILLFSLIFKLEKFRWALVLIVLLIAVGLFLFTYKS 158 (349)
T ss_pred eccccHHHHHHHHHHHHHhHHHHHHHHHHHHHHhhheeEEEecc
Confidence 99999999999999999999999999888888888887766543
No 109
>PRK02237 hypothetical protein; Provisional
Probab=88.06 E-value=2.1 Score=31.94 Aligned_cols=47 Identities=17% Similarity=0.224 Sum_probs=40.2
Q ss_pred eeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 265 VALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 265 ~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
.+.++-.-.+.++++++.+-|++|+...++|.++.++|+.++.+.+|
T Consensus 62 YAAYGGvyI~~Sl~W~w~vdg~~Pd~~D~iGa~v~L~G~~iI~~~pR 108 (109)
T PRK02237 62 YAAYGGVYVAGSLLWLWVVDGVRPDRWDWIGAAICLVGMAVIMYAPR 108 (109)
T ss_pred HHHhhhHHHHHHHHHHHHhcCcCCChhHHHhHHHHHHhHHHheecCC
Confidence 34566667888999999999999999999999999999988876554
No 110
>KOG3912 consensus Predicted integral membrane protein [General function prediction only]
Probab=87.87 E-value=0.62 Score=41.04 Aligned_cols=66 Identities=15% Similarity=0.168 Sum_probs=58.3
Q ss_pred HHHHHHHHHHHHhhccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 245 GTVIRSSIIAWCLQKKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 245 ~~~~~~~~~~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
+-..+..+.+.++..++++...++.-...+|+-+++..+++.+++..||.|+..+++|...+-..+
T Consensus 95 ~Di~gsslm~vgL~lTsASsfQMlRGaviIFvglfst~~Ln~ti~~~qWl~i~fv~lGlviVg~~d 160 (372)
T KOG3912|consen 95 CDIAGSSLMYVGLNLTSASSFQMLRGAVIIFVGLFSTMFLNRTITGRQWLGILFVSLGLVIVGSLD 160 (372)
T ss_pred HHHhhhHHHHHHHHHhhHHHHHHhhcchhhhhHHHHHHHHhcccchhhHHHHHHHHhhhheeeeee
Confidence 345667788899999999999999999999999999999999999999999999999988776543
No 111
>KOG1442 consensus GDP-fucose transporter [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Intracellular trafficking, secretion, and vesicular transport]
Probab=84.93 E-value=1.3 Score=38.96 Aligned_cols=111 Identities=19% Similarity=0.310 Sum_probs=75.9
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccC----cchHHHHHHHHHHHHHHHHHHHHHHhhccCceeeeeccchh
Q 019712 197 DKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQP----GIQRTAVIYAAIVGTVIRSSIIAWCLQKKGPVFVALFKPLG 272 (337)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~s~~~~~~ 272 (337)
.|.....++++....+...........+..+..+. .....-+.-+.++- .....+-+.++++.+.+..-+-..+.
T Consensus 60 ~plf~t~~qcLvt~~~c~~ls~ls~k~~~~ftfp~~~ldl~t~r~vlplsvVf-i~mI~fnnlcL~yVgVaFYyvgRsLt 138 (347)
T KOG1442|consen 60 APLFITWYQCLVTTSICLVLSSLSVKYPGLFTFPSLQLDLATARQVLPLSVVF-ILMISFNNLCLKYVGVAFYYVGRSLT 138 (347)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhhccceeccCcccccHHHHHhhcchhhee-eeehhccceehhhcceEEEEeccchh
Confidence 47888889998888777665543322111111111 11111111112211 23345667899999999999999999
Q ss_pred HHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 273 TAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 273 pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
.+|++++.+++++++-+..-..++.+|+.|..+-..
T Consensus 139 tvFtVlLtyvllkqkTs~~~~~~C~lIi~GF~lGvd 174 (347)
T KOG1442|consen 139 TVFTVLLTYVLLKQKTSFFALGCCLLIILGFGLGVD 174 (347)
T ss_pred hhHHHHhHHhhcccccccccceeehhheehheeccc
Confidence 999999999999999999999999999999876553
No 112
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=83.82 E-value=1.3 Score=32.90 Aligned_cols=46 Identities=15% Similarity=0.236 Sum_probs=39.0
Q ss_pred eeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 266 ALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 266 s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
+.++-.-.+.++++++.+-+++|+...++|..+.++|+.++.+.+|
T Consensus 61 AAYGGvfI~~Sl~W~w~vdg~~Pd~~D~iGa~i~L~G~~iI~~~PR 106 (107)
T PF02694_consen 61 AAYGGVFIVASLLWGWLVDGVRPDRWDWIGAAICLVGVAIILFAPR 106 (107)
T ss_pred HHhhhhHHHHHHHHHhhhcCcCCChHHHHhHHHHHHhHHheEecCC
Confidence 3455566788899999999999999999999999999988876554
No 113
>KOG1583 consensus UDP-N-acetylglucosamine transporter [Carbohydrate transport and metabolism]
Probab=82.62 E-value=2.5 Score=37.29 Aligned_cols=69 Identities=13% Similarity=0.199 Sum_probs=59.6
Q ss_pred HHHHHHHHHhh-ccCceeeeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCccccc
Q 019712 248 IRSSIIAWCLQ-KKGPVFVALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGKESNM 316 (337)
Q Consensus 248 ~~~~~~~~~l~-~~~~~~~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~~~~~ 316 (337)
....+.+++++ +++...-.++..-.++..+++++++.|.+.+..|+....++-+|+++....+.++.+.
T Consensus 76 ~vnv~NN~al~f~I~~PlHiIfRsgsll~nM~~g~il~~k~Ys~~Qy~Sv~~iTiGiiIcTl~s~~d~~~ 145 (330)
T KOG1583|consen 76 IVNVTNNYALKFNIPMPLHIIFRSGSLLANMILGWILLGKRYSLRQYSSVLMITIGIIICTLFSSKDGRS 145 (330)
T ss_pred eeeeeccceeeecccceEEEEEecCcHHHHHHHHHHhccceeehhhhhhHHhhhhhheeEEeecCcchhh
Confidence 45567788887 4677778888999999999999999999999999999999999999999877765544
No 114
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=82.50 E-value=1.4 Score=39.29 Aligned_cols=131 Identities=8% Similarity=0.050 Sum_probs=69.6
Q ss_pred HHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHH-Hhhcc-C------CCccc---ccCcchHHHHHHHHH
Q 019712 175 TVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVS-IIVER-N------PSAWK---LQPGIQRTAVIYAAI 243 (337)
Q Consensus 175 l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~-~~~~~-~------~~~~~---~~~~~~~~~~~~~~~ 243 (337)
+++.+||+-+-..+|...++.. ..+..+|=...+.++...+. +..+. . ...++ ..++..+...+..|+
T Consensus 2 ~itmlcwGSW~nt~kL~~r~gR-~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGGv 80 (336)
T PF07168_consen 2 VITMLCWGSWPNTQKLAERRGR-LPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGGV 80 (336)
T ss_pred eeehhhhcChHHHHHHHHhcCC-ccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhhH
Confidence 4577899998888888755442 21223333333333332222 21111 0 11111 111122223333344
Q ss_pred HHHHHHHHHHHHHhhccCceeeeeccc-hhHHHHHHHHHHHhCCCCc--hhhHHHHHHHHHHHHHHHh
Q 019712 244 VGTVIRSSIIAWCLQKKGPVFVALFKP-LGTAIAVFMAVMFLGETPH--LGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 244 ~~~~~~~~~~~~~l~~~~~~~~s~~~~-~~pv~~~~~~~~~~~e~~t--~~~~~G~~lii~g~~~~~~ 308 (337)
+ --++.++..+++...+.+.+-.+.. +..++++.+.|+. +.+.+ ...+.|.+++++++++-..
T Consensus 81 v-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYfl-d~~~n~a~iLF~GV~cf~iAI~lga~ 146 (336)
T PF07168_consen 81 V-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYFL-DPKINRAEILFPGVACFLIAIILGAA 146 (336)
T ss_pred h-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeeec-cCCCCCceEEEccHHHHHHHHHHHHH
Confidence 3 3478888888888888776665543 3345566666653 45554 2456788888888776553
No 115
>PF05977 MFS_3: Transmembrane secretion effector; InterPro: IPR010290 This family consists of the enterobactin exporter EntS proteins and putative permeases all belonging to the major facilitator superfamily. EntS exports the siderophore enterobactin out of the cell. The genetic locus entS was changed from ybdA so as to reflect its relevant biological function [].
Probab=81.96 E-value=52 Score=32.37 Aligned_cols=38 Identities=5% Similarity=-0.166 Sum_probs=16.7
Q ss_pred cchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q 019712 269 KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAV 306 (337)
Q Consensus 269 ~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~ 306 (337)
....|+-+.++|.+.-.-.++....++++..+++..+.
T Consensus 353 ~g~~~lGsll~G~la~~~g~~~al~~a~~~lll~~~~~ 390 (524)
T PF05977_consen 353 FGGMPLGSLLWGFLADHFGVRTALLIAGAALLLSALIA 390 (524)
T ss_pred HHHHHHHHHHHHHHHHHhCHHHHHHHHHHHHHHHHHHH
Confidence 33446666666665433233333333333333333333
No 116
>PRK06638 NADH:ubiquinone oxidoreductase subunit J; Provisional
Probab=80.53 E-value=34 Score=28.88 Aligned_cols=50 Identities=16% Similarity=0.143 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHh
Q 019712 167 WALGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSII 219 (337)
Q Consensus 167 ~~~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 219 (337)
.....++.+.+-++-|...+.... +-. ...+..-|......+....+++.
T Consensus 28 ~v~s~l~Li~~f~~vA~l~~ll~a--~Fl-a~~qIiVYvGAI~VLflFvIMll 77 (198)
T PRK06638 28 PVHSALFLILTFLSIAGLYFLLGA--EFL-GVVQIIVYVGAVMVLFLFVVMML 77 (198)
T ss_pred HHHHHHHHHHHHHHHHHHHHHhch--HHH-HHHHHHHHHHHHHHHHHHHHHHc
Confidence 445677777777777765555332 111 35556666666666656655553
No 117
>PF08507 COPI_assoc: COPI associated protein; InterPro: IPR013714 Proteins in this family co-localise with COPI vesicle coat proteins []. In yeast it is a Golgi membrane protein involved in vesicular trafficking, interacting with TVP18 [].
Probab=73.52 E-value=7.7 Score=30.57 Aligned_cols=16 Identities=25% Similarity=0.515 Sum_probs=9.8
Q ss_pred hHHHHHHHHHHHHHHH
Q 019712 292 SLIGTVVIAFGFYAVI 307 (337)
Q Consensus 292 ~~~G~~lii~g~~~~~ 307 (337)
.++|..+...|++...
T Consensus 89 ~i~g~~~~~~G~~~i~ 104 (136)
T PF08507_consen 89 IIIGLLLFLVGVIYII 104 (136)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4566666777765544
No 118
>KOG2766 consensus Predicted membrane protein [Function unknown]
Probab=72.66 E-value=26 Score=30.84 Aligned_cols=126 Identities=13% Similarity=-0.001 Sum_probs=79.4
Q ss_pred chhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCCccCHHHHHHHHHHHHHHHHHHHHHHH
Q 019712 2 ALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGPVLTFSLLCKFFMLGVLGICLVQIFAI 80 (337)
Q Consensus 2 l~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~~ 80 (337)
++.+-+++.+.+.=.... ++.|-.++...-.++++++..+ ... .+++...+.|..-....+...+.+++.+.+.=
T Consensus 172 i~GATlYaVSNv~EEflv-kn~d~~elm~~lgLfGaIIsaIQ~i~---~~~~~~tl~w~~~i~~yl~f~L~MFllYsl~p 247 (336)
T KOG2766|consen 172 IAGATLYAVSNVSEEFLV-KNADRVELMGFLGLFGAIISAIQFIF---ERHHVSTLHWDSAIFLYLRFALTMFLLYSLAP 247 (336)
T ss_pred EecceeeeeccccHHHHH-hcCcHHHHHHHHHHHHHHHHHHHHhh---hccceeeEeehHHHHHHHHHHHHHHHHHHhhH
Confidence 344556666666666665 6788888888888899998888 543 34455444442112222234444455555555
Q ss_pred HhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 81 TGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 81 ~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
.-++..+++...+=.-+.-.+..++ ..++-+.++. ..++......|.++-.
T Consensus 248 il~k~~~aT~~nlslLTsDmwsl~i--~~FgYhv~wL------Y~laF~~i~~GliiYs 298 (336)
T KOG2766|consen 248 ILIKTNSATMFNLSLLTSDMWSLLI--RTFGYHVDWL------YFLAFATIATGLIIYS 298 (336)
T ss_pred HheecCCceEEEhhHhHHHHHHHHH--HHHhcchhhh------hHHHHHHHHHhhEEee
Confidence 5566666655544444555566555 4456668888 8999999999988763
No 119
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=71.35 E-value=4.6 Score=30.06 Aligned_cols=30 Identities=23% Similarity=0.319 Sum_probs=25.6
Q ss_pred HHHHHHHhCCCCchhhHHHHHHHHHHHHHH
Q 019712 277 VFMAVMFLGETPHLGSLIGTVVIAFGFYAV 306 (337)
Q Consensus 277 ~~~~~~~~~e~~t~~~~~G~~lii~g~~~~ 306 (337)
..+++++++|++++....|.++++.+++.+
T Consensus 77 ~~Fsv~~l~E~l~~n~l~af~~i~~av~fi 106 (108)
T PF04342_consen 77 APFSVFYLGEPLKWNYLWAFLCILGAVYFI 106 (108)
T ss_pred HHHHHHHhCCCccHHHHHHHHHHHHhhhee
Confidence 356778999999999999999999887653
No 120
>KOG1582 consensus UDP-galactose transporter related protein [Carbohydrate transport and metabolism]
Probab=70.76 E-value=10 Score=33.54 Aligned_cols=111 Identities=15% Similarity=0.198 Sum_probs=74.4
Q ss_pred CCChHHHHHHHHHHHHHHHHH-HHHHhhccCCCC------ccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhh
Q 019712 22 GMSNFVYVVYYNALGTFILLH-YFIYNTYRSKGP------VLTFSLLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAM 94 (337)
Q Consensus 22 ~~~~~~~~~~r~~~~~i~l~~-~~~~~~~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i 94 (337)
+-+..+++++...++.++++. +... .+..+ .-+.+.....++.+..+ .++......-++.-.+..++.+
T Consensus 217 ~~ss~EmvfySy~iG~vflf~~mvlT---ge~f~a~~fcaehp~~tyGy~~~~s~~g-ylG~~~VLalI~~fGA~~aatv 292 (367)
T KOG1582|consen 217 PASSSEMVFYSYGIGFVFLFAPMVLT---GELFSAWTFCAEHPVRTYGYAFLFSLAG-YLGIVFVLALIKLFGALIAATV 292 (367)
T ss_pred CCCcceEEEeeecccHHHHHHHHHhc---ccchhhhHHHHhCcHhHHHHHHHHHHHh-HhhHHHHHHHHHHhchhHHHHH
Confidence 345677888888888888777 5443 22111 12345555555555554 3333333333344566677777
Q ss_pred cchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeeecc
Q 019712 95 GNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSLYK 142 (337)
Q Consensus 95 ~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~~~ 142 (337)
...--..|.+++++++.++++.. ...+.++...|+++=...+
T Consensus 293 TTaRKavTi~lSfllFsKPfT~q------y~~~gllv~lgI~Ln~ysk 334 (367)
T KOG1582|consen 293 TTARKAVTILLSFLLFSKPFTEQ------YVWSGLLVVLGIYLNMYSK 334 (367)
T ss_pred HHhHhHHHHHHHHHHHcCchHHH------HhhhhHHHHHHHHhhcccC
Confidence 77778889999999999999999 9999999999999864443
No 121
>KOG4831 consensus Unnamed protein [Function unknown]
Probab=70.68 E-value=11 Score=28.17 Aligned_cols=60 Identities=22% Similarity=0.217 Sum_probs=47.2
Q ss_pred HHHHHHHHHhhccCceeeeeccc-hhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 248 IRSSIIAWCLQKKGPVFVALFKP-LGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 248 ~~~~~~~~~l~~~~~~~~s~~~~-~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
.+..+|+..++..+-+.+..+.+ +.-.++.+.|..+-.|......+.|..++++|+.++.
T Consensus 64 cgSaly~~tLa~a~islavpv~nsltfafta~~G~~LGE~~~g~~a~lGt~liv~Gi~Lci 124 (125)
T KOG4831|consen 64 CGSALYYLTLASAPISLAVPVTNSLTFAFTAIFGKALGEETQGGLALLGTSLIVFGIWLCI 124 (125)
T ss_pred hhHHHHHHHHhcCCceeeeeecchhHHHHHHHHHHHhccccccceeehhhhHHhhhhhhee
Confidence 55677788888888887777655 4677888889886666677788999999999998753
No 122
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=67.86 E-value=11 Score=27.97 Aligned_cols=47 Identities=15% Similarity=0.173 Sum_probs=39.3
Q ss_pred eeeccchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccC
Q 019712 265 VALFKPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 265 ~s~~~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
.+.++-.-.+.++++.+.+=|.+|+.+.++|.++.++|+.++.+..+
T Consensus 61 YAAYGGvyI~~sL~W~~~Vdg~~pdr~D~~Ga~icl~G~~vil~~pR 107 (109)
T COG1742 61 YAAYGGVYIAASLAWLWVVDGVRPDRYDWIGAAICLAGVAVILFGPR 107 (109)
T ss_pred HHHhcchHHHHHHHHHHHHcCcCCcHHHhhhHHHHHhceeeeEeCCC
Confidence 34566677888999999999999999999999999999877766543
No 123
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=65.10 E-value=17 Score=26.62 Aligned_cols=31 Identities=23% Similarity=0.292 Sum_probs=27.3
Q ss_pred HHHHHHHhCCCCchhhHHHHHHHHHHHHHHH
Q 019712 277 VFMAVMFLGETPHLGSLIGTVVIAFGFYAVI 307 (337)
Q Consensus 277 ~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~ 307 (337)
..++.+.++|++.+..+.|..+++.|++.+.
T Consensus 84 v~Fsvfyl~epl~~~~l~a~~~i~gav~fiF 114 (116)
T COG3169 84 VPFSVFYLKEPLRWNYLWAFLLILGAVYFIF 114 (116)
T ss_pred HHHHHHHHcCcchHHHHHHHHHHHHHHHHhc
Confidence 4568899999999999999999999988764
No 124
>PRK02237 hypothetical protein; Provisional
Probab=63.71 E-value=34 Score=25.71 Aligned_cols=47 Identities=11% Similarity=0.099 Sum_probs=36.3
Q ss_pred Ccchhhhh-cchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 87 SPTLASAM-GNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 87 ~~~~~~~i-~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
+.+.+-.- .....+...+..+.+=|+|+++. +++|..++++|+.++.
T Consensus 57 ~~GRvYAAYGGvyI~~Sl~W~w~vdg~~Pd~~------D~iGa~v~L~G~~iI~ 104 (109)
T PRK02237 57 AFGRVYAAYGGVYVAGSLLWLWVVDGVRPDRW------DWIGAAICLVGMAVIM 104 (109)
T ss_pred hhhhHHHHhhhHHHHHHHHHHHHhcCcCCChh------HHHhHHHHHHhHHHhe
Confidence 34444333 34666667788899999999999 9999999999998773
No 125
>PF01102 Glycophorin_A: Glycophorin A; InterPro: IPR001195 Proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Glycophorin A (PAS-2) and glycophorin B (PAS-3) belong to the MNS blood group system and are associated with antigens that include M/N, S/s, U, He, Mi(a), M(c), Vw, Mur, M(g), Vr, M(e), Mt(a), St(a), Ri(a), Cl(a), Ny(a), Hut, Hil, M(v), Far, Mit, Dantu, Hop, Nob, En(a), ENKT, amongst others. Glycophorin A is the major sialoglycoprotein of the erythrocyte membrane []. Structurally, glycophorin A consists of an N-terminal extracellular domain, heavily glycosylated on serine and threonine residues, followed by a transmembrane region and a C-terminal cytoplasmic domain. Other glycophorins in this entry such as Glycophorin B and Glycophorin E represent minor sialoglycoproteins in the erythrocyte membrane.; GO: 0016021 integral to membrane; PDB: 2KPF_B 1AFO_B 2KPE_A.
Probab=61.27 E-value=7.3 Score=30.06 Aligned_cols=20 Identities=20% Similarity=0.117 Sum_probs=9.2
Q ss_pred HHHHHHHHHHHHHHhccCcc
Q 019712 294 IGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 294 ~G~~lii~g~~~~~~~~~~~ 313 (337)
.|++++++.+.++.++.+|+
T Consensus 75 aGvIg~Illi~y~irR~~Kk 94 (122)
T PF01102_consen 75 AGVIGIILLISYCIRRLRKK 94 (122)
T ss_dssp HHHHHHHHHHHHHHHHHS--
T ss_pred HHHHHHHHHHHHHHHHHhcc
Confidence 45555555555454444443
No 126
>PF02694 UPF0060: Uncharacterised BCR, YnfA/UPF0060 family; InterPro: IPR003844 This entry describes integral membrane proteins of unknown function.; GO: 0016020 membrane
Probab=60.87 E-value=30 Score=25.92 Aligned_cols=52 Identities=12% Similarity=0.132 Sum_probs=39.7
Q ss_pred hhcccCcchhhhh-cchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheee
Q 019712 82 GIKYSSPTLASAM-GNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVS 139 (337)
Q Consensus 82 al~~~~~~~~~~i-~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~ 139 (337)
.++-.+.+.+-.- .....+...+..+.+=|+|+++. +++|..+++.|+.++.
T Consensus 50 Tl~p~~fGRvYAAYGGvfI~~Sl~W~w~vdg~~Pd~~------D~iGa~i~L~G~~iI~ 102 (107)
T PF02694_consen 50 TLQPAAFGRVYAAYGGVFIVASLLWGWLVDGVRPDRW------DWIGAAICLVGVAIIL 102 (107)
T ss_pred hcCcccchhHHHHhhhhHHHHHHHHHhhhcCcCCChH------HHHhHHHHHHhHHheE
Confidence 3444444544333 34677778888999999999999 9999999999999874
No 127
>PF04342 DUF486: Protein of unknown function, DUF486; InterPro: IPR007437 This family contains several proteins of uncharacterised function.
Probab=60.29 E-value=70 Score=23.94 Aligned_cols=50 Identities=8% Similarity=0.106 Sum_probs=33.8
Q ss_pred hcccCcchhhhhcc-hhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 83 IKYSSPTLASAMGN-LIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 83 l~~~~~~~~~~i~~-~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
.+.-+.++--+++- .+-..-+.++.+++||++++. ...|.++.+.++.++
T Consensus 56 ~~~~s~~QLKi~QEvitL~vF~~Fsv~~l~E~l~~n------~l~af~~i~~av~fi 106 (108)
T PF04342_consen 56 YQTFSLAQLKIIQEVITLVVFAPFSVFYLGEPLKWN------YLWAFLCILGAVYFI 106 (108)
T ss_pred ccccCHHHHHHHHHHHhhheeHHHHHHHhCCCccHH------HHHHHHHHHHhhhee
Confidence 33345555555543 233334567888999999999 999888887777654
No 128
>COG3086 RseC Positive regulator of sigma E activity [Signal transduction mechanisms]
Probab=54.85 E-value=7.7 Score=30.67 Aligned_cols=22 Identities=14% Similarity=0.238 Sum_probs=12.6
Q ss_pred ceeeeeccchhHHHHHHHHHHH
Q 019712 262 PVFVALFKPLGTAIAVFMAVMF 283 (337)
Q Consensus 262 ~~~~s~~~~~~pv~~~~~~~~~ 283 (337)
....+.+.|+.|.++++++.++
T Consensus 74 lL~sA~LvYi~PL~~l~v~~~L 95 (150)
T COG3086 74 LLKSALLVYIFPLVGLFLGAIL 95 (150)
T ss_pred HHHHHHHHHHHHHHHHHHHHHH
Confidence 3344455666676666665554
No 129
>PF11044 TMEMspv1-c74-12: Plectrovirus spv1-c74 ORF 12 transmembrane protein; InterPro: IPR022743 This is a group of proteins expressed by Plectroviruses. The Plectroviruses are single-stranded DNA viruses belonging to the Inoviridae. This entry represents putative transmembrane proteins of unknown function.
Probab=53.91 E-value=8.7 Score=23.51 Aligned_cols=18 Identities=39% Similarity=0.552 Sum_probs=12.1
Q ss_pred CchhhHHHHHHHHHHHHH
Q 019712 288 PHLGSLIGTVVIAFGFYA 305 (337)
Q Consensus 288 ~t~~~~~G~~lii~g~~~ 305 (337)
|+|..++=.++|++|++.
T Consensus 2 p~wlt~iFsvvIil~If~ 19 (49)
T PF11044_consen 2 PTWLTTIFSVVIILGIFA 19 (49)
T ss_pred chHHHHHHHHHHHHHHHH
Confidence 566667667777777643
No 130
>PRK13108 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=53.09 E-value=74 Score=30.72 Aligned_cols=24 Identities=21% Similarity=0.155 Sum_probs=19.8
Q ss_pred CchhhHHHHHHHHHHHHHHHhccC
Q 019712 288 PHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 288 ~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
++..|++.+.++++|++++.+.++
T Consensus 254 l~~~Q~lSl~~il~gl~~~~~~~~ 277 (460)
T PRK13108 254 IRINSFTSTFVFIGAVVYIILAPK 277 (460)
T ss_pred ccHHHHHHHHHHHHHHHHHHHhhc
Confidence 788999999999999887765443
No 131
>PF06813 Nodulin-like: Nodulin-like; InterPro: IPR010658 This entry represents a conserved region within plant nodulin-like proteins and a number of uncharacterised proteins.
Probab=49.35 E-value=1.8e+02 Score=25.48 Aligned_cols=106 Identities=6% Similarity=0.087 Sum_probs=49.9
Q ss_pred hhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHHHH---HHHHHHHhhccCceeeeec
Q 019712 192 LKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTVIR---SSIIAWCLQKKGPVFVALF 268 (337)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~l~~~~~~~~s~~ 268 (337)
.++.+ |......-.....+-............. +...|...++..+.+...+ ......++++.+-.+....
T Consensus 60 ~d~~g-p~~~l~iG~~~~~~GY~~~~l~~~~~i~-----~~~~~~~~~~~~l~~~s~~~~~ta~lvt~~~NFP~~RG~vv 133 (250)
T PF06813_consen 60 YDRFG-PWVVLLIGAVLGFVGYGLLWLAVSGRIP-----SLPVWLMCLFLFLGGNSSCWFNTASLVTCVRNFPRSRGTVV 133 (250)
T ss_pred HHhcc-hHHHHHHHHHHHHHHHHHHHHHHhCccC-----ccchHHHHHHHHHHcccHHHhhhHHHHHHHHhCccccCcee
Confidence 34554 5555444444444444333332222211 1234444444444322222 2344556777777776666
Q ss_pred cchh-------HHHHHHHHHHHhCCCCchhhHHHHHHHHHHH
Q 019712 269 KPLG-------TAIAVFMAVMFLGETPHLGSLIGTVVIAFGF 303 (337)
Q Consensus 269 ~~~~-------pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~ 303 (337)
+.+. -+++.+...++-++.-+.....+....+++.
T Consensus 134 gilk~~~GLSaai~t~i~~~~f~~~~~~fll~la~~~~~v~l 175 (250)
T PF06813_consen 134 GILKGFFGLSAAIFTQIYSAFFGDDPSSFLLFLAVLPAVVCL 175 (250)
T ss_pred hhhhHHHHhHHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHH
Confidence 5554 4555555655555444444445544444443
No 132
>PF07444 Ycf66_N: Ycf66 protein N-terminus; InterPro: IPR010004 This entry represents Ycf66, a protein that is restricted to the chloroplasts of simple plants and algae. It is also found in the cyanobacteria. The function is unknown. As the family is exclusively found in phototrophic organisms it may play a role in photosynthesis.
Probab=49.11 E-value=20 Score=25.65 Aligned_cols=32 Identities=9% Similarity=-0.053 Sum_probs=24.6
Q ss_pred CCCchhhHHHHHHHHHHHHHHHhccCcccccc
Q 019712 286 ETPHLGSLIGTVVIAFGFYAVIWAQGKESNMT 317 (337)
Q Consensus 286 e~~t~~~~~G~~lii~g~~~~~~~~~~~~~~~ 317 (337)
-..++..++|.+++++|..++..+..+++-++
T Consensus 3 ~~~~~~~iLgi~l~~~~~~Ly~lr~~~Pev~R 34 (84)
T PF07444_consen 3 FGFGPSYILGIILILGGLALYFLRFFRPEVSR 34 (84)
T ss_pred cccCHHHHHHHHHHHHHHHHHHHHHHCcchhh
Confidence 35788899999999999999887665554433
No 133
>PF07168 Ureide_permease: Ureide permease; InterPro: IPR009834 This entry represents ureide permease, which transports a wide spectrum of oxo derivatives of heterocyclic nitrogen compounds, including allantoin, uric acid and xanthine, but not adenine. Transport is dependent on glucose and a proton gradient [].
Probab=47.74 E-value=17 Score=32.63 Aligned_cols=112 Identities=14% Similarity=0.080 Sum_probs=64.8
Q ss_pred CchhHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHH-HHHH-hhccC---CCC-------ccCHHHHHHHHHHH
Q 019712 1 MALVEIGEVGMITLGKAAMSSGMSNFVYVVYYNALGTFILLH-YFIY-NTYRS---KGP-------VLTFSLLCKFFMLG 68 (337)
Q Consensus 1 ml~~~~~wg~~~~~~k~~~~~~~~~~~~~~~r~~~~~i~l~~-~~~~-~~~~~---~~~-------~~~~~~~~~~~~~g 68 (337)
|+++.+|||.....-|++- +.....+...+-+.++.++..+ .-+. +...+ ..| .-++......+.-|
T Consensus 1 M~itmlcwGSW~nt~kL~~-r~gR~~qh~Y~DYsig~lL~All~A~TlGs~G~~~~~g~~Fl~qL~Q~n~~sv~~A~aGG 79 (336)
T PF07168_consen 1 MVITMLCWGSWPNTQKLAE-RRGRLPQHFYWDYSIGNLLAALLIAFTLGSIGESTPEGPNFLTQLSQANWPSVLFAMAGG 79 (336)
T ss_pred CeeehhhhcChHHHHHHHH-hcCCccceehhHHHHHHHHHHHHHHHhccccCCCCCCCccHHHHHhcCChHHHHHHHHhh
Confidence 7899999999999999984 4333333445555555544433 2121 10111 111 12334444445555
Q ss_pred HHHHHHHHHHHHHhhcccCcchhhhhcch-hHHHHHHHHHHHhhcccc
Q 019712 69 VLGICLVQIFAITGIKYSSPTLASAMGNL-IPGITFLLAVFFRMEKVA 115 (337)
Q Consensus 69 ~l~~~~~~~~~~~al~~~~~~~~~~i~~~-~pv~~~ll~~~~~~e~~~ 115 (337)
++ +.+++++.-+|+.+...+.+-++... .-+....+-++ +..|.+
T Consensus 80 vv-fnlgNillq~aia~aGmSVafpvg~glalVlGv~~NYf-ld~~~n 125 (336)
T PF07168_consen 80 VV-FNLGNILLQAAIAFAGMSVAFPVGIGLALVLGVTLNYF-LDPKIN 125 (336)
T ss_pred Hh-hhhHHHHHHHHHHHhcceeeeeeecceEEEEeeeeeee-ccCCCC
Confidence 55 58899999999999888888777653 33333343443 345554
No 134
>COG4657 RnfA Predicted NADH:ubiquinone oxidoreductase, subunit RnfA [Energy production and conversion]
Probab=47.31 E-value=99 Score=25.11 Aligned_cols=70 Identities=13% Similarity=0.183 Sum_probs=44.0
Q ss_pred hHHHHHHHHHHHhhccccccccCccchhhHHHH-------HhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHH
Q 019712 98 IPGITFLLAVFFRMEKVAIRSRSSQAKILGTVV-------SIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALG 170 (337)
Q Consensus 98 ~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l-------~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G 170 (337)
..+.+-+......|..++.+ +.+|+.+ +..|+.++... ++.+....
T Consensus 81 IAv~VQf~Em~v~KtsP~LY------r~LGIfLPLITTNCaVLgvaLln~~---------------------~~~~f~qs 133 (193)
T COG4657 81 IAVVVQFTEMVVRKTSPTLY------RLLGIFLPLITTNCAVLGVALLNIN---------------------EGHNFLQS 133 (193)
T ss_pred HHHHHHHHHHHHHccCHHHH------HHHHHhhhhHhhchHHHHHHHHHhh---------------------hhhhHHHH
Confidence 34445556666777777777 8888875 44566665321 22234456
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhh
Q 019712 171 GLLLTVTCFSSATWKIFQAAVLKE 194 (337)
Q Consensus 171 ~~~~l~a~~~~a~~~i~~k~~~~~ 194 (337)
....+.++.+++.-.+......++
T Consensus 134 v~~gf~a~lGfslvmvlfA~iRER 157 (193)
T COG4657 134 VVYGFGAALGFSLVMVLFAAIRER 157 (193)
T ss_pred HHHHhhhHhhHHHHHHHHHHHHHH
Confidence 777778888888877765544443
No 135
>PF05297 Herpes_LMP1: Herpesvirus latent membrane protein 1 (LMP1); InterPro: IPR007961 This family consists of several latent membrane protein 1 or LMP1s mostly from Epstein-Barr virus (strain GD1) (HHV-4) (Human herpesvirus 4). LMP1 of HHV-4 is a 62-65 kDa plasma membrane protein possessing six membrane spanning regions, a short cytoplasmic N terminus and a long cytoplasmic carboxy tail of 200 amino acids. HHV-4 virus latent membrane protein 1 (LMP1) is essential for HHV-4 mediated transformation and has been associated with several cases of malignancies. HHV-4-like viruses in Macaca fascicularis (Cynomolgus monkeys) have been associated with high lymphoma rates in immunosuppressed monkeys [].; GO: 0019087 transformation of host cell by virus, 0016021 integral to membrane; PDB: 1CZY_E 1ZMS_B.
Probab=46.46 E-value=6.6 Score=34.70 Aligned_cols=45 Identities=7% Similarity=0.152 Sum_probs=0.0
Q ss_pred CcchhhhhcchhHH--HHHHHHHHHhhccccccccCccchhhHHHHHhhhhhe
Q 019712 87 SPTLASAMGNLIPG--ITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFI 137 (337)
Q Consensus 87 ~~~~~~~i~~~~pv--~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~l 137 (337)
+-+..+++.+...+ ++.++-.+|.++-+.+. ..+++++.++-.++
T Consensus 48 t~~a~~vl~sfAvvliiIIiIImlF~RrLLCPL------GlLCiilimi~lLv 94 (381)
T PF05297_consen 48 TQGALTVLYSFAVVLIIIIIIIMLFKRRLLCPL------GLLCIILIMIVLLV 94 (381)
T ss_dssp -----------------------------------------------------
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHhhcCcc------hHHHHHHHHHHHHH
Confidence 33334444443332 22333334444455666 56666655554443
No 136
>COG1742 Uncharacterized conserved protein [Function unknown]
Probab=46.03 E-value=1.2e+02 Score=22.57 Aligned_cols=40 Identities=10% Similarity=0.182 Sum_probs=33.0
Q ss_pred cchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhheeee
Q 019712 95 GNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIVSL 140 (337)
Q Consensus 95 ~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 140 (337)
.....+...+..+++=|.++++. +|+|..++++|+.++..
T Consensus 65 GGvyI~~sL~W~~~Vdg~~pdr~------D~~Ga~icl~G~~vil~ 104 (109)
T COG1742 65 GGVYIAASLAWLWVVDGVRPDRY------DWIGAAICLAGVAVILF 104 (109)
T ss_pred cchHHHHHHHHHHHHcCcCCcHH------HhhhHHHHHhceeeeEe
Confidence 34566677778888888999999 99999999999888754
No 137
>MTH00057 ND6 NADH dehydrogenase subunit 6; Provisional
Probab=44.10 E-value=1.9e+02 Score=24.12 Aligned_cols=34 Identities=9% Similarity=0.047 Sum_probs=22.3
Q ss_pred HHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhcc
Q 019712 277 VFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 277 ~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~ 310 (337)
-.+|..++.|-.-+-+..|..+.++-+..+...+
T Consensus 132 ~~iG~~Lyt~Y~l~fe~~s~lLLvAmIGAIvLa~ 165 (186)
T MTH00057 132 EVLGRVLYTDYYYLFILASFILLVAMIGAIVLTH 165 (186)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 3457777888888888888888655443333333
No 138
>PF15102 TMEM154: TMEM154 protein family
Probab=42.96 E-value=29 Score=27.62 Aligned_cols=19 Identities=16% Similarity=0.219 Sum_probs=8.8
Q ss_pred HHHHHHHHHHHHhccCccc
Q 019712 296 TVVIAFGFYAVIWAQGKES 314 (337)
Q Consensus 296 ~~lii~g~~~~~~~~~~~~ 314 (337)
+++++..++++.+.|||+.
T Consensus 69 vlLLl~vV~lv~~~kRkr~ 87 (146)
T PF15102_consen 69 VLLLLSVVCLVIYYKRKRT 87 (146)
T ss_pred HHHHHHHHHheeEEeeccc
Confidence 3444444555555444433
No 139
>COG3169 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=40.77 E-value=1.5e+02 Score=21.91 Aligned_cols=30 Identities=10% Similarity=0.320 Sum_probs=25.2
Q ss_pred HHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 103 FLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 103 ~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
..++.+++||++++. .+.+..+...|+.++
T Consensus 84 v~Fsvfyl~epl~~~------~l~a~~~i~gav~fi 113 (116)
T COG3169 84 VPFSVFYLKEPLRWN------YLWAFLLILGAVYFI 113 (116)
T ss_pred HHHHHHHHcCcchHH------HHHHHHHHHHHHHHh
Confidence 456888999999999 999888887777765
No 140
>COG2271 UhpC Sugar phosphate permease [Carbohydrate transport and metabolism]
Probab=38.86 E-value=2.9e+02 Score=26.48 Aligned_cols=135 Identities=10% Similarity=0.124 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhhccCCCcccccCcchHHHHHHHHHHHHH-
Q 019712 169 LGGLLLTVTCFSSATWKIFQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIVERNPSAWKLQPGIQRTAVIYAAIVGTV- 247 (337)
Q Consensus 169 ~G~~~~l~a~~~~a~~~i~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 247 (337)
+|++. .+-.+.|++.-.+...+.++. ++-..+....+.++++.+..... + . -.........-|.+-+.
T Consensus 66 lG~i~-s~f~i~YG~sKf~~G~~sDr~-npr~fm~~gLilsai~nil~Gfs---~--s----~~~~~~l~~lng~fQg~G 134 (448)
T COG2271 66 LGILG-SAFSITYGVSKFVMGVLSDRS-NPRYFMAFGLILSAIVNILFGFS---P--S----LFLFAVLWVLNGWFQGMG 134 (448)
T ss_pred HHHHH-HHHHHHHHHHHHHhhhhcccC-CCceeehHHHHHHHHHHHHHhhh---h--H----HHHHHHHHHHHHHHhcCC
Confidence 45433 233567777777777766666 56666666555555555444331 0 0 00111111112221110
Q ss_pred ---HHHHHHHHHhhccCceeeeec-------cchhHHHHHHHHHHHhCC-CCchhhHHHHHHHHHHHHHHHhccCcccc
Q 019712 248 ---IRSSIIAWCLQKKGPVFVALF-------KPLGTAIAVFMAVMFLGE-TPHLGSLIGTVVIAFGFYAVIWAQGKESN 315 (337)
Q Consensus 248 ---~~~~~~~~~l~~~~~~~~s~~-------~~~~pv~~~~~~~~~~~e-~~t~~~~~G~~lii~g~~~~~~~~~~~~~ 315 (337)
.+-.+..+--++..-...++- +.+-|+++.+ +++.++- .-......|++.+++|++.+.+.+.++++
T Consensus 135 wpp~~~~i~~Wfsr~eRG~~~siWn~shNiGGal~~~~~~l-a~~~~~~~w~~~f~~pgiiaiival~~~~~~rd~Pqs 212 (448)
T COG2271 135 WPPCARTITHWFSRKERGTWWSIWNTSHNIGGALAPLVALL-AFFAFHGGWRAAFYFPGIIAIIVALILLFLLRDRPQS 212 (448)
T ss_pred CcHHHHHHHHHcCccccCceEEEehhhhhcccchHHHHHHH-HHHHhccchhHHHHHHHHHHHHHHHHHHHHhCCCccc
Confidence 111111122222222233322 2334555544 5555542 23333467888899999888877766554
No 141
>PF06946 Phage_holin_5: Phage holin; InterPro: IPR009708 This entry represents the Bacteriophage A118, holin protein. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This protein family represent one of a large number of mutually dissimilar families of phage holins. It is thought that the temporal precision of holin-mediated lysis may occur through the build-up of a holin oligomer which causes the lysis [].
Probab=37.81 E-value=1.6e+02 Score=21.49 Aligned_cols=60 Identities=10% Similarity=0.016 Sum_probs=32.6
Q ss_pred HHHhhccCceeeeeccchhHHHHHHHHHHH---hCCC-CchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 254 AWCLQKKGPVFVALFKPLGTAIAVFMAVMF---LGET-PHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 254 ~~~l~~~~~~~~s~~~~~~pv~~~~~~~~~---~~e~-~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
..++++++....-.+-.++.+++++++.+. -++. +-...|.|...-+.+..+.....+|.
T Consensus 22 Vq~IkkT~~v~~K~iPlIs~viGilLG~~~~~~~~~~~l~~~~~aG~laGlAaTGL~e~~t~r~ 85 (93)
T PF06946_consen 22 VQAIKKTKVVPNKWIPLISVVIGILLGAAAYPLTGDGNLALMAWAGGLAGLAATGLFEQFTNRS 85 (93)
T ss_pred HHHHHHhccCCcchhhHHHHHHHHHHHHHhhhcCCCccHHHHHHHHHHhhhhhhhHHHHHHhhh
Confidence 456666655455555555556666665442 2322 22224777777777766655444433
No 142
>PF15048 OSTbeta: Organic solute transporter subunit beta protein
Probab=36.36 E-value=59 Score=25.04 Aligned_cols=28 Identities=18% Similarity=0.209 Sum_probs=16.3
Q ss_pred HHHhCCCCchhhH----HHHHHHHHHHHHHHh
Q 019712 281 VMFLGETPHLGSL----IGTVVIAFGFYAVIW 308 (337)
Q Consensus 281 ~~~~~e~~t~~~~----~G~~lii~g~~~~~~ 308 (337)
|+|--|..|++.+ +.++++++|++++.+
T Consensus 25 W~fR~ED~tpWNysiL~Ls~vvlvi~~~LLgr 56 (125)
T PF15048_consen 25 WFFRVEDATPWNYSILALSFVVLVISFFLLGR 56 (125)
T ss_pred HheecCCCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 3445677887764 334445566666554
No 143
>PF13038 DUF3899: Domain of unknown function (DUF3899)
Probab=34.75 E-value=35 Score=24.65 Aligned_cols=20 Identities=15% Similarity=0.487 Sum_probs=13.9
Q ss_pred chhhHHHHHHHHHHHHHHHh
Q 019712 289 HLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 289 t~~~~~G~~lii~g~~~~~~ 308 (337)
+...++|..+.+.|.+....
T Consensus 3 N~~Fl~~l~lliig~~~~v~ 22 (92)
T PF13038_consen 3 NILFLVGLILLIIGGFLFVF 22 (92)
T ss_pred hHHHHHHHHHHHHHHHHHHH
Confidence 34567888888888776653
No 144
>TIGR00544 lgt prolipoprotein diacylglyceryl transferase. The conversion of lipoprotein precursors into lipoproteins consists of three steps. First, the enzyme described by this model transfers a diacylglyceryl moiety from phosphatidylglycerol to the side chain of a Cys that will become the new N-terminus. Second, the signal peptide is removed by signal peptidase II. Finally, the free amino group of the new N-terminal Cys is acylated by apolipoprotein N-acyltransferase.
Probab=34.73 E-value=40 Score=30.12 Aligned_cols=26 Identities=15% Similarity=0.175 Sum_probs=20.7
Q ss_pred CchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 288 PHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 288 ~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
+|..|++...++++|+.+..+.++++
T Consensus 246 lt~~Q~~sl~~i~~g~~~~~~~~~~~ 271 (278)
T TIGR00544 246 ISMGQILSLLMIAGILIIMLLAYKLS 271 (278)
T ss_pred CcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 68999999999999988776544443
No 145
>PRK12437 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=34.20 E-value=42 Score=29.81 Aligned_cols=24 Identities=17% Similarity=0.394 Sum_probs=19.5
Q ss_pred CchhhHHHHHHHHHHHHHHHhccC
Q 019712 288 PHLGSLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 288 ~t~~~~~G~~lii~g~~~~~~~~~ 311 (337)
+|..|+++..++++|+.+..++++
T Consensus 235 ls~~Q~~sl~~i~~g~~~~~~~~~ 258 (269)
T PRK12437 235 LRIAQVISIPLIIIGIILIIYRRK 258 (269)
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHh
Confidence 688999999999999887755443
No 146
>PF15471 TMEM171: Transmembrane protein family 171
Probab=34.15 E-value=57 Score=28.73 Aligned_cols=24 Identities=17% Similarity=0.331 Sum_probs=18.3
Q ss_pred hhhHHHHHHHHHHHHHHHhccCcc
Q 019712 290 LGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 290 ~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
..|+.|-.++++|.+.....+-||
T Consensus 161 slQImGPlIVl~GLCFFVVAHvKK 184 (319)
T PF15471_consen 161 SLQIMGPLIVLVGLCFFVVAHVKK 184 (319)
T ss_pred ehhhhhhHHHHHhhhhhheeeeee
Confidence 468999999999988777655443
No 147
>PF09656 PGPGW: Putative transmembrane protein (PGPGW); InterPro: IPR019099 This entry represents proteins that contain three predicted transmembrane helices and an unusual motif with consensus sequence PGPGW.
Probab=33.95 E-value=1.3e+02 Score=19.41 Aligned_cols=45 Identities=27% Similarity=0.338 Sum_probs=32.0
Q ss_pred hhhHHHHHhhhhheeeeccCCCCCCCCCCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 019712 124 KILGTVVSIAGAFIVSLYKGPPLLGFSSPSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQAAVLKE 194 (337)
Q Consensus 124 ~~~g~~l~~~Gv~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~ 194 (337)
..+|..+.+.|++++.. .+ .|.+..+++....|...-..|+..+.
T Consensus 5 ~v~G~~lv~~Gii~~~l-PG-------------------------pG~l~i~~GL~iLa~ef~wArr~l~~ 49 (53)
T PF09656_consen 5 GVLGWVLVVAGIIMLPL-PG-------------------------PGLLVIFLGLAILATEFPWARRLLRR 49 (53)
T ss_pred hhHHHHHHHHHHHhhcC-CC-------------------------CcHHHHHHHHHHHHHhhHHHHHHHHH
Confidence 57788889999888732 22 27777777777788877777776543
No 148
>PHA02902 putative IMV membrane protein; Provisional
Probab=33.71 E-value=85 Score=21.03 Aligned_cols=24 Identities=17% Similarity=0.243 Sum_probs=11.6
Q ss_pred HHHHHHHHHHHHHHH-hccCccccc
Q 019712 293 LIGTVVIAFGFYAVI-WAQGKESNM 316 (337)
Q Consensus 293 ~~G~~lii~g~~~~~-~~~~~~~~~ 316 (337)
+....+++++..++. +++.|..+.
T Consensus 8 i~~v~v~Ivclliya~YrR~kci~s 32 (70)
T PHA02902 8 ILAVIVIIFCLLIYAAYKRYKCIPS 32 (70)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 344555555554444 444444443
No 149
>PF06570 DUF1129: Protein of unknown function (DUF1129); InterPro: IPR009214 There are currently no experimental data for members of this group or their homologues. However, these proteins contain predicted integral membrane proteins (with several transmembrane segments).
Probab=33.42 E-value=2.9e+02 Score=23.24 Aligned_cols=34 Identities=15% Similarity=0.350 Sum_probs=17.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHhhcccCcchhhhh
Q 019712 60 LLCKFFMLGVLGICLVQIFAITGIKYSSPTLASAM 94 (337)
Q Consensus 60 ~~~~~~~~g~l~~~~~~~~~~~al~~~~~~~~~~i 94 (337)
.++..++.++.. .+.+...+......++...-.+
T Consensus 145 ~~~k~~~~~~~~-~~~w~~~~~~~~~lp~~inp~l 178 (206)
T PF06570_consen 145 SWWKYILISVLA-MVLWIVIFVLTSFLPPVINPVL 178 (206)
T ss_pred HHHHHHHHHHHH-HHHHHHHHHHHHHccccCCcCC
Confidence 334444444443 4445555555555666655433
No 150
>PF06609 TRI12: Fungal trichothecene efflux pump (TRI12); InterPro: IPR010573 This family consists of several fungal specific trichothecene efflux pump proteins. Many of the genes involved in trichothecene toxin biosynthesis in Fusarium sporotrichioides are present within a gene cluster. It has been suggested that TRI12 may play a role in F. sporotrichioides self-protection against trichothecenes [].
Probab=32.48 E-value=5.4e+02 Score=25.96 Aligned_cols=17 Identities=29% Similarity=0.411 Sum_probs=14.7
Q ss_pred hhhHHHHHhhhhheeee
Q 019712 124 KILGTVVSIAGAFIVSL 140 (337)
Q Consensus 124 ~~~g~~l~~~Gv~li~~ 140 (337)
+|+|+++.+.|+.++.+
T Consensus 240 D~IG~~L~~~Gl~LfLl 256 (599)
T PF06609_consen 240 DWIGIFLFIAGLALFLL 256 (599)
T ss_pred hHHHHHHHHHHHHHHHH
Confidence 79999999999888754
No 151
>KOG1623 consensus Multitransmembrane protein [General function prediction only]
Probab=31.20 E-value=1.5e+02 Score=25.84 Aligned_cols=31 Identities=16% Similarity=-0.098 Sum_probs=25.1
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhhhC
Q 019712 165 SNWALGGLLLTVTCFSSATWKIFQAAVLKEY 195 (337)
Q Consensus 165 ~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~~ 195 (337)
.....|.+++......+|.=....|+..|+.
T Consensus 124 ~~~~lG~vc~~~nI~~~~sPL~~m~~VIktk 154 (243)
T KOG1623|consen 124 RVSVLGIVCAVFNISMFAAPLSVIRKVIKTK 154 (243)
T ss_pred eeeeeehhhhhhhHHhhhccHHhhhhheecC
Confidence 3456899999999999999888888776664
No 152
>TIGR01167 LPXTG_anchor LPXTG-motif cell wall anchor domain. A common feature of this proteins containing this domain appears to be a high proportion of charged and zwitterionic residues immediatedly upstream of the LPXTG motif. This model differs from other descriptions of the LPXTG region by including a portion of that upstream charged region.
Probab=30.48 E-value=88 Score=17.54 Aligned_cols=13 Identities=23% Similarity=0.470 Sum_probs=6.3
Q ss_pred chhhHHHHHHHHH
Q 019712 289 HLGSLIGTVVIAF 301 (337)
Q Consensus 289 t~~~~~G~~lii~ 301 (337)
+...++|.+++..
T Consensus 11 ~~~~~~G~~l~~~ 23 (34)
T TIGR01167 11 SLLLLLGLLLLGL 23 (34)
T ss_pred HHHHHHHHHHHHH
Confidence 3445566633333
No 153
>PF07698 7TM-7TMR_HD: 7TM receptor with intracellular HD hydrolase; InterPro: IPR011621 These bacterial 7TM receptor proteins have an intracellular domain IPR006674 from INTERPRO. This entry corresponds to the 7 helix transmembrane domain. These proteins also contain an N-terminal extracellular domain.
Probab=30.36 E-value=3.1e+02 Score=22.58 Aligned_cols=33 Identities=9% Similarity=0.084 Sum_probs=17.0
Q ss_pred HHHHHhhhCCChhHHHHHHHHHHHHHHHHHHHhh
Q 019712 187 FQAAVLKEYPDKINLVFFSCFFGTIQCAVVSIIV 220 (337)
Q Consensus 187 ~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 220 (337)
..|+..+|. +-.....+......+..+...+..
T Consensus 120 ~~~~~~~R~-~~i~ag~~v~l~~~~~~l~~~l~~ 152 (194)
T PF07698_consen 120 SVRRIRSRS-DIIKAGLLVGLVNALMILALGLIQ 152 (194)
T ss_pred HHHHHHHHH-HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 344444454 455555555555555555555533
No 154
>PRK11902 ampG muropeptide transporter; Reviewed
Probab=30.00 E-value=4.5e+02 Score=24.29 Aligned_cols=15 Identities=20% Similarity=0.250 Sum_probs=8.4
Q ss_pred hHHHHHHHHHHHHHH
Q 019712 292 SLIGTVVIAFGFYAV 306 (337)
Q Consensus 292 ~~~G~~lii~g~~~~ 306 (337)
..++.++.+.+..+.
T Consensus 372 f~~~~~~~~~~~~~~ 386 (402)
T PRK11902 372 YLMTVVIALPGLALL 386 (402)
T ss_pred HHHHHHHHHHHHHHH
Confidence 455565666665544
No 155
>PF04246 RseC_MucC: Positive regulator of sigma(E), RseC/MucC; InterPro: IPR007359 This bacterial family of integral membrane proteins represents a positive regulator of the sigma(E) transcription factor, namely RseC/MucC. The sigma(E) transcription factor is up-regulated by cell envelope protein misfolding, and regulates the expression of genes that are collectively termed ECF (devoted to Extra-Cellular Functions) []. In Pseudomonas aeruginosa, derepression of sigma(E) is associated with the alginate-overproducing phenotype characteristic of chronic respiratory tract colonization in cystic fibrosis patients. The mechanism by which RseC/MucC positively regulates the sigma(E) transcription factor is unknown. RseC is also thought to have a role in thiamine biosynthesis in Salmonella typhimurium []. In addition, this family also includes an N-terminal part of RnfF, a Rhodobacter capsulatus protein, of unknown function, that is essential for nitrogen fixation. This protein also contains a domain found in ApbE protein IPR003374 from INTERPRO, which is itself involved in thiamine biosynthesis.
Probab=29.35 E-value=35 Score=26.67 Aligned_cols=16 Identities=13% Similarity=0.152 Sum_probs=8.3
Q ss_pred eccchhHHHHHHHHHH
Q 019712 267 LFKPLGTAIAVFMAVM 282 (337)
Q Consensus 267 ~~~~~~pv~~~~~~~~ 282 (337)
.+.|+-|++.++.+.+
T Consensus 72 ~l~Y~lPll~li~g~~ 87 (135)
T PF04246_consen 72 FLVYLLPLLALIAGAV 87 (135)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 3444556555555544
No 156
>PF06166 DUF979: Protein of unknown function (DUF979); InterPro: IPR009323 This family consists of several putative bacterial membrane proteins. The function of this family is unclear.
Probab=29.15 E-value=4.1e+02 Score=24.07 Aligned_cols=26 Identities=23% Similarity=0.351 Sum_probs=14.4
Q ss_pred ChhHHHHHHHHHHHHHHHHHHHhhcc
Q 019712 197 DKINLVFFSCFFGTIQCAVVSIIVER 222 (337)
Q Consensus 197 ~~~~~~~~~~~~~~i~~~~~~~~~~~ 222 (337)
|+..........++++.+.......+
T Consensus 118 d~~~~tlv~lgig~i~Ali~a~~itk 143 (308)
T PF06166_consen 118 DPKNGTLVGLGIGAIVALIVALIITK 143 (308)
T ss_pred CCCcchHHHHHHHHHHHHHHHHHHhC
Confidence 44445555556666666665554433
No 157
>PF13347 MFS_2: MFS/sugar transport protein
Probab=29.10 E-value=4.7e+02 Score=24.45 Aligned_cols=48 Identities=15% Similarity=0.053 Sum_probs=31.0
Q ss_pred HHHHHhhcccCcchhhhhcchhHHHHHHHHHHHhhccccccccCccch
Q 019712 77 IFAITGIKYSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAK 124 (337)
Q Consensus 77 ~~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~ 124 (337)
..++.-..-.+++..+.+....+++-++...++..---+.++|++||+
T Consensus 25 ~~f~~~~~gl~~~~~g~i~~~~~i~dai~dp~~G~~sDr~~tr~Grrr 72 (428)
T PF13347_consen 25 LYFYTDVLGLSPALAGLILLVGRIWDAITDPLIGYLSDRTRTRWGRRR 72 (428)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHhhhhcCCcEEEEEeeecccccccc
Confidence 334444445788888888888888888888777332222335676655
No 158
>PRK10489 enterobactin exporter EntS; Provisional
Probab=28.34 E-value=4.8e+02 Score=24.15 Aligned_cols=17 Identities=18% Similarity=0.249 Sum_probs=8.6
Q ss_pred hHHHHHHHHHHHHHHHh
Q 019712 292 SLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 292 ~~~G~~lii~g~~~~~~ 308 (337)
.+.|....+.+++....
T Consensus 382 ~~~~~~~~~~~~~~~~~ 398 (417)
T PRK10489 382 SASGFGLLIIGVLLLLV 398 (417)
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 34555555555555443
No 159
>PF02487 CLN3: CLN3 protein; InterPro: IPR003492 Batten's disease, the juvenile variant of neuronal ceroid lipofuscionosis (NCL), is a recessively inherited disorder affecting children of 5-10 years of age. The disease is characterised by progressive loss of vision, seizures and psychomotor disturbances. Biochemically, the disease is characterised by lysosomal accumulation of hydrophobic material, mainly ATP synthase subunit C, largely in the brain but also in other tissues. The disease is fatal within a decade []. Mutations in the CLN3 gene are believed to cause Batten's disease []. The CLN3 gene, with a predicted 438-residue product, maps to chromosome p16p12.1. The gene contains at least 15 exons spanning 15kb and is highly conserved in mammals []. A 1.02kb deletion in the CLN3 gene, occurring in either one or both alleles, is found in 85% of Batten disease chromosomes causing a frameshift generating a predicted translated product of 181 amino acid residues [, ]. 22 other mutations, including deletions, insertions and point mutations, have been reported. It has been suggested that such mutations result in severely truncated CLN3 proteins, or affect its structure/conformation [, ]. CLN3 proteins, which are believed to associate in complexes, are heavily glycosylated lysosomal membrane proteins [], containing complex Asn-linked oligosaccharides []. Extensive glycosylation is important for the stability of these lysosomal proteins in the highly hydrolytic lysosomal lumen. Lysosomal sequestration of active lysosomal enzymes, transport of degraded molecules from the lysosomes, and fusion and fission between lysosomes and other organelles. The CLN3 protein is a 43kDa, highly hydrophobic, multi-transmembrane (TM), phosphorylated protein []. Hydrophobicity analysis predicts 6-9 TM segments, suggesting that CLN3 is a TM protein that may function as a chaperone or signal transducer. The majority of putative phosphorylation sites are found in the N-terminal domain, encompassing 150 residues []. Phosphorylation is believed to be important for membrane compartment interaction, in the formation of functional complexes, and in regulation and interactions with other proteins []. CLN3 contains several motifs that may undergo lipid post-translational modifications (PTMs). PTMs contribute to targeting and anchoring of modified proteins to distinct biological membranes []. There are three general classes of lipid modification: N-terminal myristoylation, C-terminal prenylation, and palmitoylation of cysteine residues. Such modifications are believed to be a common form of PTM occurring in 0.5% of all cellular proteins, including brain tissue []. The C terminus of the CLN3 contains various lipid modification sites: C435, target for prenylation; G419, target for myristoylation; and C414, target for palmitoylation []. Prenylation results in protein hydrophobicity, influences interaction with upstream regulatory proteins and downstream effectors, facilitates protein-protein interaction (multisubunit assembly) and promotes anchoring to membrane lipids. The prenylation motif, Cys-A-A-X, is highly conserved within CLN3 protein sequences of different species []. Species with known CLN3 protein homologues include: Homo sapiens, Canis familiaris, Mus musculus, Saccharomyces cerevisiae and Drosophila melanogaster.; GO: 0016020 membrane
Probab=28.32 E-value=5.2e+02 Score=24.53 Aligned_cols=39 Identities=28% Similarity=0.519 Sum_probs=24.3
Q ss_pred chhHHHHH-HHHHHHh-hccccccccCccchhhHHHHHhhhhheeee
Q 019712 96 NLIPGITF-LLAVFFR-MEKVAIRSRSSQAKILGTVVSIAGAFIVSL 140 (337)
Q Consensus 96 ~~~pv~~~-ll~~~~~-~e~~~~~~~~~~~~~~g~~l~~~Gv~li~~ 140 (337)
...|-+.. +++-++. +-+...| -+...++...|.+++..
T Consensus 68 di~P~l~~Kl~aP~fi~~v~y~~R------i~~~~~l~~~g~l~va~ 108 (402)
T PF02487_consen 68 DILPSLLVKLIAPFFIHRVPYWIR------ILICVALSAAGMLLVAF 108 (402)
T ss_pred HHHHHHHHHHHhHhhhhhccchHH------HHHHHHHHHHHHhheee
Confidence 34555543 4444443 3444556 78888889999888754
No 160
>TIGR00905 2A0302 transporter, basic amino acid/polyamine antiporter (APA) family. This family includes several families of antiporters that, rather commonly, are encoded next to decarboxylases that convert one of the antiporter substrates into the other. This arrangement allows a cycle that can remove proteins from the cytoplasm and thereby protect against acidic conditions.
Probab=28.23 E-value=5.4e+02 Score=24.69 Aligned_cols=44 Identities=18% Similarity=0.090 Sum_probs=24.7
Q ss_pred cchhHHHHHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHhccCc
Q 019712 269 KPLGTAIAVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIWAQGK 312 (337)
Q Consensus 269 ~~~~pv~~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~~~~~ 312 (337)
...-++++.++..+..-.........|.++++.|..++.+.+++
T Consensus 395 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~y~~~~~~ 438 (473)
T TIGR00905 395 ALIVGVIACVYSIWLLYAAGLKYLLLGFILYAPGIIFYGRARKE 438 (473)
T ss_pred HHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 34445555554443332222234567888889998777765443
No 161
>PRK01637 hypothetical protein; Reviewed
Probab=28.22 E-value=4.3e+02 Score=23.52 Aligned_cols=27 Identities=7% Similarity=-0.135 Sum_probs=15.5
Q ss_pred chhhHHHHHHHHHHHHHHHhccCcccc
Q 019712 289 HLGSLIGTVVIAFGFYAVIWAQGKESN 315 (337)
Q Consensus 289 t~~~~~G~~lii~g~~~~~~~~~~~~~ 315 (337)
-|..+.+.++++.+.+...+.+.|+.+
T Consensus 247 lWlyl~~~ilL~Gaelna~~~~~~~~~ 273 (286)
T PRK01637 247 VWVYLSWCIVLLGAEITATLGEYRKLK 273 (286)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 455566666666666655555444443
No 162
>PRK00052 prolipoprotein diacylglyceryl transferase; Reviewed
Probab=28.21 E-value=58 Score=28.93 Aligned_cols=25 Identities=28% Similarity=0.608 Sum_probs=20.5
Q ss_pred CchhhHHHHHHHHHHHHHHHhccCc
Q 019712 288 PHLGSLIGTVVIAFGFYAVIWAQGK 312 (337)
Q Consensus 288 ~t~~~~~G~~lii~g~~~~~~~~~~ 312 (337)
+|..|+++..+++.|+.+..+.+++
T Consensus 237 ls~~Q~isl~~~~~gi~~~~~~~~~ 261 (269)
T PRK00052 237 LTMGQILSIPMILLGIILLIWAYRK 261 (269)
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhh
Confidence 6999999999999999877665433
No 163
>PF08693 SKG6: Transmembrane alpha-helix domain; InterPro: IPR014805 SKG6 and AXL2 are membrane proteins that show polarised intracellular localisation [, ]. This entry represents the highly conserved transmembrane alpha-helical domain found in these proteins [, ]. The full-length AXL2 protein has a negative regulatory function in cytokinesis [].
Probab=27.67 E-value=47 Score=20.08 Aligned_cols=18 Identities=22% Similarity=0.811 Sum_probs=9.8
Q ss_pred HHHHHHHHHHHHHHhccC
Q 019712 294 IGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 294 ~G~~lii~g~~~~~~~~~ 311 (337)
+|.++++++.+++.|+++
T Consensus 21 V~vI~~vl~~~l~~~~rR 38 (40)
T PF08693_consen 21 VGVIIIVLGAFLFFWYRR 38 (40)
T ss_pred hHHHHHHHHHHhheEEec
Confidence 345555666666654444
No 164
>PF12606 RELT: Tumour necrosis factor receptor superfamily member 19; InterPro: IPR022248 The members of tumor necrosis factor receptor (TNFR) superfamily have been designated as the "guardians of the immune system" due to their roles in immune cell proliferation, differentiation, activation, and death (apoptosis). RELT (receptor expressed in lymphoid tissues) is a member of the TNFR superfamily. The messenger RNA of RELT is especially abundant in hematologic tissues such as spleen, lymph node, and peripheral blood leukocytes as well as in leukemias and lymphomas. RELT is able to activate the NF-kappaB pathway and selectively binds tumor necrosis factor receptor-associated factor 1 []. RELT like proteins 1 and 2 (RELL1 and RELL2) are two RELT homologues that bind to RELT. The expression of RELL1 at the mRNA level is ubiquitous, whereas expression of RELL2 mRNA is more restricted to particular tissues [].
Probab=26.66 E-value=1.4e+02 Score=19.09 Aligned_cols=16 Identities=13% Similarity=0.040 Sum_probs=8.6
Q ss_pred HHHHHHHHHHHhccCc
Q 019712 297 VVIAFGFYAVIWAQGK 312 (337)
Q Consensus 297 ~lii~g~~~~~~~~~~ 312 (337)
+++++|+.++...|++
T Consensus 12 v~~lLg~~I~~~~K~y 27 (50)
T PF12606_consen 12 VMGLLGLSICTTLKAY 27 (50)
T ss_pred HHHHHHHHHHHHhhcc
Confidence 3455566666655543
No 165
>PF05961 Chordopox_A13L: Chordopoxvirus A13L protein; InterPro: IPR009236 This family consists of A13L proteins from the Chordopoxviruses. A13L or p8 is one of the three most abundant membrane proteins of the intracellular mature Vaccinia virus [].
Probab=26.05 E-value=1.3e+02 Score=20.50 Aligned_cols=20 Identities=20% Similarity=0.014 Sum_probs=12.0
Q ss_pred hHHHHHHHHHHHHHHHhccC
Q 019712 292 SLIGTVVIAFGFYAVIWAQG 311 (337)
Q Consensus 292 ~~~G~~lii~g~~~~~~~~~ 311 (337)
-++++.+++.|.+++....+
T Consensus 6 iLi~ICVaii~lIlY~iYnr 25 (68)
T PF05961_consen 6 ILIIICVAIIGLILYGIYNR 25 (68)
T ss_pred HHHHHHHHHHHHHHHHHHhc
Confidence 34666777777666664433
No 166
>CHL00196 psbY photosystem II protein Y; Provisional
Probab=25.42 E-value=1.3e+02 Score=17.66 Aligned_cols=23 Identities=22% Similarity=-0.044 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHH
Q 019712 168 ALGGLLLTVTCFSSATWKIFQAA 190 (337)
Q Consensus 168 ~~G~~~~l~a~~~~a~~~i~~k~ 190 (337)
..=.++-++.+.+|+.|++..-.
T Consensus 5 lliVl~Pil~A~~Wa~fNIg~~A 27 (36)
T CHL00196 5 LLVIAAPVLAAASWALFNIGRLA 27 (36)
T ss_pred HHHHHHHHHHHHHHHHHHhHHHH
Confidence 34566778899999999987543
No 167
>COG2246 Predicted membrane protein [Function unknown]
Probab=24.92 E-value=2.4e+02 Score=22.24 Aligned_cols=61 Identities=23% Similarity=0.209 Sum_probs=36.9
Q ss_pred ccCHHHHHHHHHHHHHHHHHHHHHHHHhhc--ccCcchhhhhcchhHHHHHHHHHHHhhcccccccc
Q 019712 55 VLTFSLLCKFFMLGVLGICLVQIFAITGIK--YSSPTLASAMGNLIPGITFLLAVFFRMEKVAIRSR 119 (337)
Q Consensus 55 ~~~~~~~~~~~~~g~l~~~~~~~~~~~al~--~~~~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~ 119 (337)
....+...++...|+++...+...++.-.+ ..+...+.++ -..+.++..++.+++.+.+++
T Consensus 7 ~~~~~~~lrF~~VG~~~t~V~~~~~~ll~~~~~~~~~~A~~~----a~~~~ii~sf~~N~~wTF~~~ 69 (139)
T COG2246 7 KFTLSRLLRFAIVGGLGTLVDFAVLWLLVKALGVPYALANAI----AYEAAIIFSFVLNRRWTFRDR 69 (139)
T ss_pred hhHHHHHHHHHhcchHHHHHHHHHHHHHHHhcccchHHHHHH----HHHHHHHHHHHHHceeeEeec
Confidence 335667788999999985555555544444 2344444443 344455555667777777765
No 168
>PF08611 DUF1774: Fungal protein of unknown function (DUF1774); InterPro: IPR013920 This is a fungal protein of unknown function.
Probab=24.78 E-value=1.2e+02 Score=22.42 Aligned_cols=11 Identities=18% Similarity=0.356 Sum_probs=7.7
Q ss_pred CcccCCCCCCC
Q 019712 325 ESLNQKIPPLK 335 (337)
Q Consensus 325 ~~~~~~~p~~~ 335 (337)
+.|.|..|+++
T Consensus 87 ~~d~EraPLLn 97 (97)
T PF08611_consen 87 STDRERAPLLN 97 (97)
T ss_pred CCccccccccC
Confidence 56677888764
No 169
>PF07214 DUF1418: Protein of unknown function (DUF1418); InterPro: IPR010815 This family consists of several hypothetical Enterobacterial proteins of around 100 residues in length. Members of this family are often described as YbjC. In Escherichia coli the ybjC gene is located downstream of nfsA (which encodes the major oxygen-insensitive nitroreductase). It is thought that nfsA and ybjC form an operon an its promoter is a class I SoxS-dependent promoter []. The function of this family is unknown.
Probab=23.56 E-value=2.8e+02 Score=20.36 Aligned_cols=16 Identities=13% Similarity=0.453 Sum_probs=7.6
Q ss_pred HHHHHHHHHHHHHHhc
Q 019712 294 IGTVVIAFGFYAVIWA 309 (337)
Q Consensus 294 ~G~~lii~g~~~~~~~ 309 (337)
+|+.+.+=+.+.+.|+
T Consensus 51 ~Gi~lMlPAav~ivWR 66 (96)
T PF07214_consen 51 VGIGLMLPAAVNIVWR 66 (96)
T ss_pred HHHHHHHHHHHHHHHH
Confidence 4455544444444454
No 170
>PRK05122 major facilitator superfamily transporter; Provisional
Probab=22.93 E-value=5.9e+02 Score=23.29 Aligned_cols=33 Identities=6% Similarity=-0.140 Sum_probs=14.3
Q ss_pred HHHHHHHHhCCCCchhhHHHHHHHHHHHHHHHh
Q 019712 276 AVFMAVMFLGETPHLGSLIGTVVIAFGFYAVIW 308 (337)
Q Consensus 276 ~~~~~~~~~~e~~t~~~~~G~~lii~g~~~~~~ 308 (337)
..+.+++.-.-..+...+++.++.+++......
T Consensus 355 ~~~~g~l~~~~g~~~~~~~~~~~~~~~~~~~~~ 387 (399)
T PRK05122 355 GPLAGLVASWFGYPSIFLAAALAALLGLALTWL 387 (399)
T ss_pred HHHHHHHHHHcCHHHHHHHHHHHHHHHHHHHHH
Confidence 344444432222333344555555555544443
No 171
>PF05545 FixQ: Cbb3-type cytochrome oxidase component FixQ; InterPro: IPR008621 This family consists of several Cbb3-type cytochrome oxidase components (FixQ/CcoQ). FixQ is found in nitrogen fixing bacteria. Since nitrogen fixation is an energy-consuming process, effective symbioses depend on operation of a respiratory chain with a high affinity for O2, closely coupled to ATP production. This requirement is fulfilled by a special three-subunit terminal oxidase (cytochrome terminal oxidase cbb3), which was first identified in Bradyrhizobium japonicum as the product of the fixNOQP operon [].
Probab=22.49 E-value=84 Score=19.67 Aligned_cols=18 Identities=11% Similarity=0.143 Sum_probs=10.9
Q ss_pred HHHHHHHHHHHHhccCcc
Q 019712 296 TVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 296 ~~lii~g~~~~~~~~~~~ 313 (337)
..++.+|++...++++++
T Consensus 18 ~~~~F~gi~~w~~~~~~k 35 (49)
T PF05545_consen 18 FFVFFIGIVIWAYRPRNK 35 (49)
T ss_pred HHHHHHHHHHHHHcccch
Confidence 444566777777765553
No 172
>PHA03049 IMV membrane protein; Provisional
Probab=21.70 E-value=1.6e+02 Score=19.87 Aligned_cols=18 Identities=17% Similarity=0.146 Sum_probs=10.3
Q ss_pred HHHHHHHHHHHHHHHhcc
Q 019712 293 LIGTVVIAFGFYAVIWAQ 310 (337)
Q Consensus 293 ~~G~~lii~g~~~~~~~~ 310 (337)
++++.+++.|.+++-...
T Consensus 7 l~iICVaIi~lIvYgiYn 24 (68)
T PHA03049 7 LVIICVVIIGLIVYGIYN 24 (68)
T ss_pred HHHHHHHHHHHHHHHHHh
Confidence 455666666666555433
No 173
>PF10754 DUF2569: Protein of unknown function (DUF2569); InterPro: IPR019690 This entry represents a protein that is conserved in bacteria. The function is not known, but several members are annotated as being YdgK or a homologue thereof and associated to the inner membrane. This signature also matches proteins that are described as transglutaminase-like enzymes, although this could not be confirmed.
Probab=21.41 E-value=3.9e+02 Score=21.19 Aligned_cols=31 Identities=6% Similarity=-0.174 Sum_probs=25.3
Q ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHhhh
Q 019712 164 YSNWALGGLLLTVTCFSSATWKIFQAAVLKE 194 (337)
Q Consensus 164 ~~~~~~G~~~~l~a~~~~a~~~i~~k~~~~~ 194 (337)
+.+.....+..+.++..|.-|...+||..+.
T Consensus 116 d~~~i~~l~~~li~a~IwipYf~~S~RVK~T 146 (149)
T PF10754_consen 116 DAEAIRELLRSLIAAAIWIPYFLRSKRVKNT 146 (149)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHhHHhhhh
Confidence 3445678889999999999999999997543
No 174
>PRK05771 V-type ATP synthase subunit I; Validated
Probab=21.21 E-value=8.5e+02 Score=24.65 Aligned_cols=29 Identities=24% Similarity=0.201 Sum_probs=19.9
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHhccCcc
Q 019712 285 GETPHLGSLIGTVVIAFGFYAVIWAQGKE 313 (337)
Q Consensus 285 ~e~~t~~~~~G~~lii~g~~~~~~~~~~~ 313 (337)
.....+...+|..++++|+..+.....++
T Consensus 502 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 530 (646)
T PRK05771 502 VVGLGPLGLIGKYLIIGGVVLIILGEGID 530 (646)
T ss_pred hccchHHHHHHHHHHHHHHHHHHHhcchh
Confidence 44455566788888888888777665443
No 175
>PRK11469 hypothetical protein; Provisional
Probab=21.18 E-value=62 Score=27.06 Aligned_cols=39 Identities=21% Similarity=0.120 Sum_probs=24.2
Q ss_pred cchhHHHHHHHHHHHhCCCCchhhHHHHHH-HHHHHHHHH
Q 019712 269 KPLGTAIAVFMAVMFLGETPHLGSLIGTVV-IAFGFYAVI 307 (337)
Q Consensus 269 ~~~~pv~~~~~~~~~~~e~~t~~~~~G~~l-ii~g~~~~~ 307 (337)
..+-|..+...+..+-+-.....+|+|..+ +.+|...+.
T Consensus 47 q~~m~~~g~~~G~~l~~~i~~~~~~i~~~lL~~lG~~mi~ 86 (188)
T PRK11469 47 ETLTPLIGWGMGMLASRFVLEWNHWIAFVLLIFLGGRMII 86 (188)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 356677777777765554444556776665 555766554
No 176
>PF15345 TMEM51: Transmembrane protein 51
Probab=21.05 E-value=90 Score=26.92 Aligned_cols=22 Identities=9% Similarity=0.155 Sum_probs=16.5
Q ss_pred HHHHHHHHHHHHHHHhccCccc
Q 019712 293 LIGTVVIAFGFYAVIWAQGKES 314 (337)
Q Consensus 293 ~~G~~lii~g~~~~~~~~~~~~ 314 (337)
..|+++.++.+++-.+.|+|++
T Consensus 66 G~Gv~LLLLSICL~IR~KRr~r 87 (233)
T PF15345_consen 66 GSGVALLLLSICLSIRDKRRRR 87 (233)
T ss_pred hHHHHHHHHHHHHHHHHHHHHh
Confidence 3588888899988887666543
No 177
>COG2211 MelB Na+/melibiose symporter and related transporters [Carbohydrate transport and metabolism]
Probab=21.00 E-value=7.8e+02 Score=23.95 Aligned_cols=117 Identities=12% Similarity=0.084 Sum_probs=59.8
Q ss_pred HHHHhhcccCcchhhhhcchhHHHHHHHHHHH--hhccccccccCccch-hhH---HHHHhhhhheeeeccCCCCCCCCC
Q 019712 78 FAITGIKYSSPTLASAMGNLIPGITFLLAVFF--RMEKVAIRSRSSQAK-ILG---TVVSIAGAFIVSLYKGPPLLGFSS 151 (337)
Q Consensus 78 ~~~~al~~~~~~~~~~i~~~~pv~~~ll~~~~--~~e~~~~~~~~~~~~-~~g---~~l~~~Gv~li~~~~~~~~~~~~~ 151 (337)
.||.-..=++++.+..+....=++-++...+. .-+|-+ +|++|++ |+- +-+++..+... ...+ .
T Consensus 37 ~fYTdv~Gis~~~aG~iflv~RiiDAi~DP~~G~i~D~t~--~r~GrfRP~lL~g~ip~~i~~~l~F--~~p~-~----- 106 (467)
T COG2211 37 FFYTDVFGLSAALAGTIFLVARIIDAITDPIMGFIVDRTR--SRWGRFRPWLLWGAIPFAIVAVLLF--ITPD-F----- 106 (467)
T ss_pred HHHhcccCCcHHHHHHHHHHHHHHHHHhcchheeeecccc--cccccccHHHHHHhHHHHHHHHHHH--cCCC-c-----
Confidence 33344444678888888777777777666666 334333 6677776 332 33333333332 1111 1
Q ss_pred CCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH----HHhhhCCChhHHHHHHHHHHHHHHH
Q 019712 152 PSNSNIQLPVSEYSNWALGGLLLTVTCFSSATWKIFQA----AVLKEYPDKINLVFFSCFFGTIQCA 214 (337)
Q Consensus 152 ~~~~~~~~~~~~~~~~~~G~~~~l~a~~~~a~~~i~~k----~~~~~~~~~~~~~~~~~~~~~i~~~ 214 (337)
+...+.....+.-.+-.++|+.-++-.. ...+++.....+..|++.++.+..+
T Consensus 107 ----------~~~~k~~ya~vtY~l~~l~YT~vniPy~al~~~iT~d~~ER~~l~s~R~~~~~~g~~ 163 (467)
T COG2211 107 ----------SMTGKLIYALVTYMLLGLGYTLVNIPYGALGPEITQDPQERASLTSWRMVFASLGGL 163 (467)
T ss_pred ----------ccCcchHHHHHHHHHHHHHHHheeCchhhcchhhcCCHHHHHHHHHHHHHHHHHHHH
Confidence 1223334454454555566666444332 2233333445666777776665433
No 178
>PRK10666 ammonium transporter; Provisional
Probab=20.91 E-value=7.5e+02 Score=23.73 Aligned_cols=23 Identities=9% Similarity=-0.097 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcc
Q 019712 63 KFFMLGVLGICLVQIFAITGIKY 85 (337)
Q Consensus 63 ~~~~~g~l~~~~~~~~~~~al~~ 85 (337)
.+..+|.+-.-.++..|+-+...
T Consensus 221 ~~~~lGt~lLw~GW~gFN~Gs~~ 243 (428)
T PRK10666 221 PMVFTGTAILYIGWFGFNAGSAG 243 (428)
T ss_pred HHHHHHHHHHHHHHHhccchhhc
Confidence 45566666556677777776654
No 179
>PF08802 CytB6-F_Fe-S: Cytochrome B6-F complex Fe-S subunit ; InterPro: IPR014909 The cytochrome b6-f complex mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions. The cytochrome b6-f complex has 4 large subunits, these are: cytochrome b6, subunit IV (17 kDa polypeptide, PetD), cytochrome f and the Rieske protein, while the 4 small subunits are: PetG, PetL, PetM and PetN. The complex functions as a dimer. This protein corresponds to the alpha helical transmembrane domain of the cytochrome b6-f complex Rieske iron-sulphur subunit. ; GO: 0009496 plastoquinol-plastocyanin reductase activity, 0051537 2 iron, 2 sulfur cluster binding, 0055114 oxidation-reduction process, 0042651 thylakoid membrane; PDB: 1Q90_R 1VF5_D 2E75_D 2E74_D 2E76_D 2D2C_Q 2ZT9_D.
Probab=20.61 E-value=2e+02 Score=17.29 Aligned_cols=34 Identities=9% Similarity=0.075 Sum_probs=20.3
Q ss_pred CccCHHHHHHHHHHHHHHHHHHHHHHHHhhcccC
Q 019712 54 PVLTFSLLCKFFMLGVLGICLVQIFAITGIKYSS 87 (337)
Q Consensus 54 ~~~~~~~~~~~~~~g~l~~~~~~~~~~~al~~~~ 87 (337)
|+..||+..-+++.|.........++=+.--.+|
T Consensus 4 Pdm~RR~lmN~ll~Gava~~a~~~lyP~~~ffvP 37 (39)
T PF08802_consen 4 PDMSRRQLMNLLLGGAVAVPAGGMLYPYVKFFVP 37 (39)
T ss_dssp --HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHS-
T ss_pred CChhHHHHHHHHHHhhHHHHHHHHhhhheeEecC
Confidence 4567888888888888775555555544433333
No 180
>TIGR02865 spore_II_E stage II sporulation protein E. Stage II sporulation protein E (SpoIIE) is a multiple membrane spanning protein with two separable functions. It plays a role in the switch to polar cell division during sporulation. By means of it protein phosphatase activity, located in the C-terminal region, it activates sigma-F. All proteins that score above the trusted cutoff to this model are found in endospore-forming Gram-positive bacteria. Surprisingly, a sequence from the Cyanobacterium-like (and presumably non-spore-forming) photosynthesizer Heliobacillus mobilis is homologous, and scores between the trusted and noise cutoffs.
Probab=20.12 E-value=1e+03 Score=24.88 Aligned_cols=45 Identities=16% Similarity=0.115 Sum_probs=32.2
Q ss_pred cchhhhhcchhHHHHHHHHHHHhhccccccccCccchhhHHHHHhhhhhee
Q 019712 88 PTLASAMGNLIPGITFLLAVFFRMEKVAIRSRSSQAKILGTVVSIAGAFIV 138 (337)
Q Consensus 88 ~~~~~~i~~~~pv~~~ll~~~~~~e~~~~~~~~~~~~~~g~~l~~~Gv~li 138 (337)
.+.+.++..+.|.-.++++...+.+|.+.+ .+.+.+-.+.|.+-+
T Consensus 10 lgRa~il~~l~PFg~af~~a~~~~~~~~~~------~~~~~~~~~~G~~t~ 54 (764)
T TIGR02865 10 LGRAVIVSPMAPFGIAFLAAVLLAKKGGDK------AFFSALGVLLGAISI 54 (764)
T ss_pred HhHHHHhcCCCchHHHHHHHHHHhhcccch------HHHHHHHHHHHHHHh
Confidence 345677888999999999999877776444 556665566676644
Done!