Query 019716
Match_columns 337
No_of_seqs 250 out of 607
Neff 4.2
Searched_HMMs 29240
Date Mon Mar 25 06:03:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019716.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019716hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2dt4_A Hypothetical protein PH 99.9 1.9E-27 6.5E-32 203.7 12.8 118 151-274 10-130 (143)
2 2p6y_A Hypothetical protein VC 99.9 1.2E-26 4E-31 199.2 16.4 116 149-273 1-117 (142)
3 2hx0_A Putative DNA-binding pr 99.9 1.3E-26 4.5E-31 201.5 16.5 121 145-274 13-134 (154)
4 3htn_A Putative DNA binding pr 99.9 6.7E-27 2.3E-31 202.4 12.4 116 151-272 16-134 (149)
5 2h6l_A Hypothetical protein; N 99.9 1.2E-26 4E-31 199.4 11.6 117 151-274 10-129 (146)
6 3hwu_A Putative DNA-binding pr 99.9 5E-24 1.7E-28 183.8 13.8 115 151-272 13-131 (147)
7 2ezd_A High mobility group pro 96.0 0.0028 9.7E-08 40.2 1.7 15 124-138 4-18 (26)
8 4dyq_A Gene 1 protein; GP1, oc 65.1 1.9 6.6E-05 35.9 1.0 14 80-93 3-16 (140)
9 1xv2_A ALDC, hypothetical prot 46.9 37 0.0013 31.2 6.4 95 161-260 97-202 (237)
10 4i95_A Putative uncharacterize 32.4 37 0.0013 29.3 3.7 34 177-212 37-70 (142)
11 1t3g_A X-linked interleukin-1 28.2 36 0.0012 28.7 3.0 27 157-183 51-77 (159)
12 4gzv_A Hypothetical protein; A 20.1 88 0.003 27.0 3.8 34 177-212 37-70 (142)
No 1
>2dt4_A Hypothetical protein PH0802; PPC domain, structural genomics, unknown function; 1.60A {Pyrococcus horikoshii}
Probab=99.95 E-value=1.9e-27 Score=203.67 Aligned_cols=118 Identities=20% Similarity=0.342 Sum_probs=105.0
Q ss_pred eeEEEEecCCccHHHHHHHHHHhCCccEEEEEeeceeeeEEEeeccCCC---CeeeeecceEEEEeeeeeeecCCCCCCC
Q 019716 151 TPHVITVQAGEDVLAKIMSFSQNGPRAVCILSANGAISNVTLRQAMTSG---GTVTYEGRFEILSLSGSILLSESGGQRS 227 (337)
Q Consensus 151 rphVIrV~~GEDVvekI~~Faq~~~raicILSAiGAVSnVTLrq~~~sg---~~~t~eG~fEILSLsGsi~~~e~G~~~s 227 (337)
++|++||++||||+++|++||+++.+..|+++++|+|++|+|++++... ..++++|+|||+||+|||.+.+ +.
T Consensus 10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~~~~~~~~g~~EIlsl~Gti~~~~-g~--- 85 (143)
T 2dt4_A 10 RTYLFRVPEGEELLTYIKNFCKKEGIETAIINGIGTLKNPKIGYFLEEKKEYKVIPLKGSYELISLIGNVSLKD-GE--- 85 (143)
T ss_dssp EEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEEETTTTEEEEEECCSEEEEEEEEEEEEEET-TE---
T ss_pred CEEEEEECCCCcHHHHHHHHHHHcCCCEEEEEEEEEEEEEEEEeecCccCcceeEeecCCEEEEEeEEEEECCC-CC---
Confidence 6999999999999999999998766666666999999999999998763 4688999999999999999864 43
Q ss_pred CCceeEEEEeCCCCcEEeeecCCccEEecceEEEEEeeccccccccC
Q 019716 228 RTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVIIGSFLAEGWKESR 274 (337)
Q Consensus 228 ~~~hLHVSLAg~dGqViGGHLag~LIAastVEVVV~sF~~~~~k~~~ 274 (337)
++.|||++|+|.||+|+||||.+++ +. ++||+|.+|.+..+++..
T Consensus 86 p~~HlHi~l~~~~G~v~GGHl~~g~-v~-t~Ev~i~~~~~~~~~R~~ 130 (143)
T 2dt4_A 86 PFVHAHVSLGNEEGIVFGGHLVEGE-VF-VAEIFLQELKGEKIERKP 130 (143)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEE-EE-EEEEEEEEEEESCCEEBC
T ss_pred ceeeEEEEEECCCCCEeCCCCCCCc-eE-EEEEEEEEcCCCeEEEeC
Confidence 7899999999999999999999887 66 999999999998787765
No 2
>2p6y_A Hypothetical protein VCA0587; NESG, Q9KM02_vibch, VCR80, structural genomics, PSI-2, prote structure initiative; 1.63A {Vibrio cholerae}
Probab=99.94 E-value=1.2e-26 Score=199.24 Aligned_cols=116 Identities=24% Similarity=0.341 Sum_probs=103.7
Q ss_pred CceeEEEEecCCccHHHHHHHHHHh-CCccEEEEEeeceeeeEEEeeccCCCCeeeeecceEEEEeeeeeeecCCCCCCC
Q 019716 149 GFTPHVITVQAGEDVLAKIMSFSQN-GPRAVCILSANGAISNVTLRQAMTSGGTVTYEGRFEILSLSGSILLSESGGQRS 227 (337)
Q Consensus 149 ~frphVIrV~~GEDVvekI~~Faq~-~~raicILSAiGAVSnVTLrq~~~sg~~~t~eG~fEILSLsGsi~~~e~G~~~s 227 (337)
.|++|++||++||||+++|.+||++ +.+++||++++|+|++++|++++... +++|+|+|||+||+|||.+.
T Consensus 1 ~~r~~~lrL~~Gedl~~~i~~~~~~~~i~~a~v~~~iGsl~~~~l~~~~~~~-~~~~~g~~EIlsl~Gti~~~------- 72 (142)
T 2p6y_A 1 MIHLIALRLTRGMDLKQQIVQLVQQHRIHAGSIASCVGCLSTLHIRLADSVS-TLQVSAPFEILSLSGTLTYQ------- 72 (142)
T ss_dssp CCEEEEEEECTTCBHHHHHHHHHHHTTCSSEEEEEEEEEEEEEEEECTTSSC-EEEECSCEEEEEEEEEECSS-------
T ss_pred CCcEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEEEEEeEEEECCCCCc-cEecCCcEEEEEeEEEEeCC-------
Confidence 3799999999999999999999976 55588999999999999999999864 78899999999999999863
Q ss_pred CCceeEEEEeCCCCcEEeeecCCccEEecceEEEEEeecccccccc
Q 019716 228 RTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVIIGSFLAEGWKES 273 (337)
Q Consensus 228 ~~~hLHVSLAg~dGqViGGHLag~LIAastVEVVV~sF~~~~~k~~ 273 (337)
..|||++|+|.||+++||||.+++++..++||+|.+|....+++.
T Consensus 73 -~~HlHisl~~~~G~v~GGHl~~g~~V~~t~Ev~i~~~~~~~~~R~ 117 (142)
T 2p6y_A 73 -HCHLHIAVADAQGRVWGGHLLEGNLINTTAELMIHHYPQHHFTRE 117 (142)
T ss_dssp -CEEEEEEEECTTSCEEEEEECTTCEECC-EEEEEEECTTEEEEEE
T ss_pred -CCEEEEEEECCCCCEEccccCCCCeEEEEEEEEEEEccCCeEEEe
Confidence 379999999999999999999877888999999999988777654
No 3
>2hx0_A Putative DNA-binding protein; NESG, PSI-2, SCR59, structural genomics, protein structure initiative; 1.55A {Salmonella choleraesuis} SCOP: d.290.1.3 PDB: 2nmu_A
Probab=99.94 E-value=1.3e-26 Score=201.52 Aligned_cols=121 Identities=26% Similarity=0.434 Sum_probs=108.1
Q ss_pred cCCCCceeEEEEecCCccHHHHHHHHHH-hCCccEEEEEeeceeeeEEEeeccCCCCeeeeecceEEEEeeeeeeecCCC
Q 019716 145 SAGVGFTPHVITVQAGEDVLAKIMSFSQ-NGPRAVCILSANGAISNVTLRQAMTSGGTVTYEGRFEILSLSGSILLSESG 223 (337)
Q Consensus 145 ~~g~~frphVIrV~~GEDVvekI~~Faq-~~~raicILSAiGAVSnVTLrq~~~sg~~~t~eG~fEILSLsGsi~~~e~G 223 (337)
+....+++|++||++||||+++|.+||+ ++.+++||++++|+|++|+||+++... +++|+|+|||+||+|+|.+.
T Consensus 13 ~~~~~~r~~vlrL~~Gedl~~~i~~~~~~~gi~~a~v~s~iGsl~~~~l~~~~~~~-~~~~~g~~EIlsl~Gti~~~--- 88 (154)
T 2hx0_A 13 HNASTARFYALRLLPGQEVFSQLHAFVQQNQLRAAWIAGCTGSLTDVALRYAGQEA-TTSLTGTFEVISLNGTLELT--- 88 (154)
T ss_dssp CSCCCCEEEEEEECTTCBHHHHHHHHHHHHTCSSEEEEEEEEEEEEEEEECTTCSS-CEEEEEEEEEEEEEEEEETT---
T ss_pred CCCCCccEEEEEECCCCcHHHHHHHHHHHhCCCEEEEEEeEeeeEEeEEEccCCCc-cEecCCcEEEEEeeeeEeCC---
Confidence 3457889999999999999999999995 566689999999999999999999865 78899999999999999863
Q ss_pred CCCCCCceeEEEEeCCCCcEEeeecCCccEEecceEEEEEeeccccccccC
Q 019716 224 GQRSRTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVIIGSFLAEGWKESR 274 (337)
Q Consensus 224 ~~~s~~~hLHVSLAg~dGqViGGHLag~LIAastVEVVV~sF~~~~~k~~~ 274 (337)
..||||+|+|.||+|+||||++++++..++||+|..|....+++..
T Consensus 89 -----~~HlHisl~~~~G~v~GGHL~~g~~V~~t~Ev~i~~~~~~~~~R~~ 134 (154)
T 2hx0_A 89 -----GEHLHLAVSDPYGVMLGGHMMPGCTVRTTLELVIGELPALTFSRQP 134 (154)
T ss_dssp -----EEEEEEEEECTTSCEEEEEECTTCEEEEEEEEEEEECTTEEEEEEE
T ss_pred -----CCEEEEEEECCCCCEEccccCCCCcEEEEEEEEEEEccCceEEEec
Confidence 3799999999999999999998778889999999999887676543
No 4
>3htn_A Putative DNA binding protein; DUF269 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE 1PE; 1.50A {Bacteroides thetaiotaomicron vpi-5482} SCOP: d.290.1.0
Probab=99.94 E-value=6.7e-27 Score=202.39 Aligned_cols=116 Identities=15% Similarity=0.211 Sum_probs=103.7
Q ss_pred eeEEEEecCCccHHHHHHHHHHhCCccEEEEEeeceeeeEEEeeccCC---CCeeeeecceEEEEeeeeeeecCCCCCCC
Q 019716 151 TPHVITVQAGEDVLAKIMSFSQNGPRAVCILSANGAISNVTLRQAMTS---GGTVTYEGRFEILSLSGSILLSESGGQRS 227 (337)
Q Consensus 151 rphVIrV~~GEDVvekI~~Faq~~~raicILSAiGAVSnVTLrq~~~s---g~~~t~eG~fEILSLsGsi~~~e~G~~~s 227 (337)
+.|++||++||||+++|.+||+++.+..|+++++|+|++|+|++++.+ +..++|+|+|||+||+|||.+.| +.
T Consensus 16 r~~~lrl~~Gedl~~~l~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EI~sl~Gti~~~d-G~--- 91 (149)
T 3htn_A 16 NKYIVSINNHTEIVKALNAFCKEKGILSGSINGIGAIGELTLRFFNPKTKAYDDKTFREQMEISNLTGNISSMN-EQ--- 91 (149)
T ss_dssp TEEEEEECTTCBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEECTTTCCEEEEEECSCEEEEEEEEEEEEET-TE---
T ss_pred CEEEEEECCCChHHHHHHHHHHHcCCcEEEEEEEEEeeeEEEEccCCCcccceeEEecCceEEEEeEEEEEccC-CC---
Confidence 689999999999999999999887777777799999999999999875 34789999999999999999864 43
Q ss_pred CCceeEEEEeCCCCcEEeeecCCccEEecceEEEEEeeccccccc
Q 019716 228 RTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVIIGSFLAEGWKE 272 (337)
Q Consensus 228 ~~~hLHVSLAg~dGqViGGHLag~LIAastVEVVV~sF~~~~~k~ 272 (337)
++.|||++|+|.||+|+||||..+ ++..++||+|..+.. .+.+
T Consensus 92 p~~HlH~sl~~~~G~v~gGHl~~g-~V~~t~Ei~i~~~~~-~~~R 134 (149)
T 3htn_A 92 VYLHLHITVGRSDYSALAGHLLSA-IQNGAGEFVVEDYSE-RISR 134 (149)
T ss_dssp EEEEEEEEEECTTSBEEEEEEEEE-EEEEEEEEEEEECCS-CCEE
T ss_pred ceEEEEEEEECCCCCEEeEEeCCC-EEEEEEEEEEEEcCC-eeEE
Confidence 789999999999999999999987 778999999999977 4544
No 5
>2h6l_A Hypothetical protein; NESG GR103, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.00A {Archaeoglobus fulgidus} SCOP: d.290.1.3
Probab=99.94 E-value=1.2e-26 Score=199.38 Aligned_cols=117 Identities=21% Similarity=0.248 Sum_probs=102.9
Q ss_pred eeEEEEecCCccHHHHHHHHHHhCCccEEEEEeeceeeeEEEeeccCCC---CeeeeecceEEEEeeeeeeecCCCCCCC
Q 019716 151 TPHVITVQAGEDVLAKIMSFSQNGPRAVCILSANGAISNVTLRQAMTSG---GTVTYEGRFEILSLSGSILLSESGGQRS 227 (337)
Q Consensus 151 rphVIrV~~GEDVvekI~~Faq~~~raicILSAiGAVSnVTLrq~~~sg---~~~t~eG~fEILSLsGsi~~~e~G~~~s 227 (337)
++|++||++||||+++|++||++..+..|+++++|+|++++|++++... ..++++|+|||+||+|||.+.+ +.
T Consensus 10 r~~~lrl~~Gedl~~~i~~~~~~~~i~~a~vs~iGsl~~~~l~~~~~~~~~y~~~~~~g~~EIlsl~Gti~~~d-g~--- 85 (146)
T 2h6l_A 10 KGFLLRLDYGKDLVRQIEEFLEEKGIHAAHISAIGAVRSAVIGYYDQEKKEYVKKELMEPLEILSLSGNVSMKD-SK--- 85 (146)
T ss_dssp EEEEEECCTTSBHHHHHHHHHHHHTCCSEEEEEEEEEEEEEEEEEETTTTEEEEEEECSCEEEEEEEEEEEEET-TE---
T ss_pred CEEEEEECCCCCHHHHHHHHHHHcCCCEEEEEEEEEEEEEEEECCCCCCcceeEEEecCcEEEEEeEEEEECCC-CC---
Confidence 6999999999999999999997765554555999999999999998764 4789999999999999999864 43
Q ss_pred CCceeEEEEeCCCCcEEeeecCCccEEecceEEEEEeeccccccccC
Q 019716 228 RTGGLSVSLAGPDGRVLGGGVAGLLTAASPVQVIIGSFLAEGWKESR 274 (337)
Q Consensus 228 ~~~hLHVSLAg~dGqViGGHLag~LIAastVEVVV~sF~~~~~k~~~ 274 (337)
++.|||++|+ .||+|+||||.+++ + .++||+|.+|.+..+++..
T Consensus 86 p~~HlHi~l~-~~G~v~gGHl~~g~-V-~t~Evvi~~~~~~~~~R~~ 129 (146)
T 2h6l_A 86 PFCHIHVLLG-KDGEVYGGHLFSAE-V-FACEVFVLPLSGEAPERAF 129 (146)
T ss_dssp EEEEEEEEEE-EBTEEEEEEEEEEE-E-EEEEEEEEECBSCCCBEEE
T ss_pred ceeeEEEEEC-CCCcEEeeecCCCE-E-EEEEEEEEEcCCCcEEEeE
Confidence 7899999999 99999999999988 4 6999999999987777653
No 6
>3hwu_A Putative DNA-binding protein; YP_299413.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.30A {Ralstonia eutropha}
Probab=99.91 E-value=5e-24 Score=183.83 Aligned_cols=115 Identities=17% Similarity=0.251 Sum_probs=100.5
Q ss_pred eeEEEEecCCccHHHHHHHHHHhCCccEEEEEeeceeeeEEEeeccCCC---CeeeeecceEEEEeeeeeeecCCCCCCC
Q 019716 151 TPHVITVQAGEDVLAKIMSFSQNGPRAVCILSANGAISNVTLRQAMTSG---GTVTYEGRFEILSLSGSILLSESGGQRS 227 (337)
Q Consensus 151 rphVIrV~~GEDVvekI~~Faq~~~raicILSAiGAVSnVTLrq~~~sg---~~~t~eG~fEILSLsGsi~~~e~G~~~s 227 (337)
+.+++||++||||+++|.+||+++.+..++++++|++++++|++++.+. ...+++ ++||+||+|||.+.| |.
T Consensus 13 ~~~~~rL~~Gedl~~~l~~~~~~~~i~~a~v~~iGsl~~~~l~~~~~~~~~y~~~~~~-~~Ei~sl~Gtis~~d-G~--- 87 (147)
T 3hwu_A 13 TGYLMVLRHGDNVLQNLEQLARDEHIPSASFVGIGFMSEATFGFYDFGRKQFDPKTYR-NVEMANMTGSIAWKE-GK--- 87 (147)
T ss_dssp TEEEEEEETTCBHHHHHHHHHHHTTCSEEEEEEEEEEEEEEEEEEETTTTEEEEEEEE-EEEEEEEEEEEEEET-TE---
T ss_pred CEEEEEECCCChHHHHHHHHHHHcCCCEEEEEEEecccEEEEEeecCCcCccccEEec-CcEEEEEEEEEEcCC-CC---
Confidence 5799999999999999999999998888888999999999999998753 356788 899999999999855 43
Q ss_pred CCceeEEEEeCCCCcEEeeecCCccEEe-cceEEEEEeeccccccc
Q 019716 228 RTGGLSVSLAGPDGRVLGGGVAGLLTAA-SPVQVIIGSFLAEGWKE 272 (337)
Q Consensus 228 ~~~hLHVSLAg~dGqViGGHLag~LIAa-stVEVVV~sF~~~~~k~ 272 (337)
++.|||++|+|.||+++||||..+ ++. .|+||+|..+.. .+.+
T Consensus 88 p~~HlH~~~~d~~g~v~GGHL~~g-~V~~~t~Ei~i~~~~~-~~~R 131 (147)
T 3hwu_A 88 PSIHAHGTVTDGTFQGAGGHLLGL-TVGTGSCEITVTVYPQ-RLDR 131 (147)
T ss_dssp EEEEEEEEEECTTCCEEEEEEEEE-EEEEEEEEEEEEEESS-CCBE
T ss_pred ceEEEEEEEECCCCcEEeeEecCc-EEEeEeEEEEEEEcCC-eEEE
Confidence 799999999999999999999988 555 599999998754 4443
No 7
>2ezd_A High mobility group protein HMG-I/HMG-Y; DNA binding protein, minor groove DNA binding, transcriptional CO-activator, architectural factor; HET: DNA; NMR {Homo sapiens} SCOP: j.10.1.1 PDB: 2eze_A*
Probab=95.96 E-value=0.0028 Score=40.23 Aligned_cols=15 Identities=47% Similarity=0.824 Sum_probs=13.7
Q ss_pred cccCCCCCCCCCCCc
Q 019716 124 YKKARGRPPGSTTRK 138 (337)
Q Consensus 124 ~kk~RGRP~GS~nK~ 138 (337)
.||+||||.|||||.
T Consensus 4 pKrpRgRpkGSKNk~ 18 (26)
T 2ezd_A 4 PKRPRGRPKGSKNKG 18 (26)
T ss_dssp CCCCSSCCTTCCCCS
T ss_pred CcCCCCCcCcccccC
Confidence 589999999999986
No 8
>4dyq_A Gene 1 protein; GP1, octamer, DNA-binding, viral protein; 1.50A {Shigella phage SF6} PDB: 4dyc_A 4dyr_A 3hef_A 4dzj_A 4dzp_A
Probab=65.09 E-value=1.9 Score=35.88 Aligned_cols=14 Identities=43% Similarity=0.954 Sum_probs=6.3
Q ss_pred ccccCCCCCCCCCC
Q 019716 80 AKRKRGRPRKYAPD 93 (337)
Q Consensus 80 ~kkKRGRPRKy~~d 93 (337)
.|+|+|||.||-+.
T Consensus 3 ~~~k~GRPtk~t~e 16 (140)
T 4dyq_A 3 TEPKAGRPSDYMPE 16 (140)
T ss_dssp -------CCSCCTT
T ss_pred CCCCCCCCCCCCHH
Confidence 38999999999885
No 9
>1xv2_A ALDC, hypothetical protein, similar to alpha- acetolactate decarboxylase; structural genomics, MCSG; 2.00A {Staphylococcus aureus subsp} SCOP: d.290.1.1
Probab=46.92 E-value=37 Score=31.22 Aligned_cols=95 Identities=13% Similarity=0.159 Sum_probs=51.3
Q ss_pred ccHHHHHHHHHHhCCccEEEEEeeceeeeEEEeeccCC---CCe----eeeecceEEEEeeeeee----ecCCCCCCCCC
Q 019716 161 EDVLAKIMSFSQNGPRAVCILSANGAISNVTLRQAMTS---GGT----VTYEGRFEILSLSGSIL----LSESGGQRSRT 229 (337)
Q Consensus 161 EDVvekI~~Faq~~~raicILSAiGAVSnVTLrq~~~s---g~~----~t~eG~fEILSLsGsi~----~~e~G~~~s~~ 229 (337)
+++-+.|.... ...-.|.+-.-|..++|++|-.... |.. ..-+-.|++=...|++. +.--.+. -.
T Consensus 97 ~~l~~~i~~~~--s~N~f~airi~G~F~~v~~R~vp~Q~~Py~~l~e~~~~Q~~f~~~~v~GTivGF~tP~~~~Gi--~v 172 (237)
T 1xv2_A 97 DVFAQIKNEML--SENLFSAVKIYGTFKHMHVRMMPAQQPPYTRLIDSARRQPEEKRQDIRGAIVGFFTPELFHGV--GS 172 (237)
T ss_dssp HHHHHHHHHSS--CTTSCEEEEEEEEEEEEEEECCCCCCSSCCCTHHHHTTCCEEEEEEEEEEEEEEEECGGGBTT--BC
T ss_pred HHHHHHHHhhh--ccccEEEEEEEEEeCeEEEEecCCCCCCCCCHHHHhcCCceEEEeccEEEEEEEecchhhccc--CC
Confidence 34444444433 4556788899999999999965321 111 11122255555555553 3321111 23
Q ss_pred ceeEEEEeCCCCcEEeeecCCccEEecceEE
Q 019716 230 GGLSVSLAGPDGRVLGGGVAGLLTAASPVQV 260 (337)
Q Consensus 230 ~hLHVSLAg~dGqViGGHLag~LIAastVEV 260 (337)
.++|+-+-+.| +.+||||.+-.+-..+++|
T Consensus 173 ~G~HlHFisdD-r~~GGHVldf~~~~~~~~~ 202 (237)
T 1xv2_A 173 AGFHIHFADDE-RAYGGHVLDFEVDDVVVEI 202 (237)
T ss_dssp SEEEEEEEETT-SSCEEEEEEEEEEEEEEEE
T ss_pred ceeEEEEEcCC-CCCCcceEEEEecceEEEE
Confidence 44555555544 4489999975444444444
No 10
>4i95_A Putative uncharacterized protein; lipocalin-like domain of PF13924 family, structural genomics center for structural genomics, JCSG; HET: MSE; 1.81A {Bacteroides eggerthii} PDB: 4gzv_A
Probab=32.40 E-value=37 Score=29.31 Aligned_cols=34 Identities=29% Similarity=0.453 Sum_probs=28.8
Q ss_pred cEEEEEeeceeeeEEEeeccCCCCeeeeecceEEEE
Q 019716 177 AVCILSANGAISNVTLRQAMTSGGTVTYEGRFEILS 212 (337)
Q Consensus 177 aicILSAiGAVSnVTLrq~~~sg~~~t~eG~fEILS 212 (337)
..=|||.=|.+.|++++. ..+.+++.+|.|||.|
T Consensus 37 ~lKIlSdDgtF~Ni~m~~--~~~aiIt~~GtY~~~S 70 (142)
T 4i95_A 37 TFKVLSDDGRIVNFTIRP--GTDAIITGYGTYRQIS 70 (142)
T ss_dssp EEEEECTTSEEEEEECCT--TSCCEEEEEEEEEEEE
T ss_pred cEEEEcCCCcEEEEEEec--CCCcEEEEeEEEEecC
Confidence 566999999999999993 2457899999999987
No 11
>1t3g_A X-linked interleukin-1 receptor accessory protein-like 1; TIR, IL-1RAPL, IL-1R, TLR, membrane protein; 2.30A {Homo sapiens}
Probab=28.18 E-value=36 Score=28.65 Aligned_cols=27 Identities=4% Similarity=0.193 Sum_probs=25.0
Q ss_pred ecCCccHHHHHHHHHHhCCccEEEEEe
Q 019716 157 VQAGEDVLAKIMSFSQNGPRAVCILSA 183 (337)
Q Consensus 157 V~~GEDVvekI~~Faq~~~raicILSA 183 (337)
+.+|++|.+.|.+..++..+.++|||-
T Consensus 51 ~~~G~~i~~~i~~~I~~Sr~~IvVlS~ 77 (159)
T 1t3g_A 51 LIPTGTYIEDVARCVDQSKRLIIVMTP 77 (159)
T ss_dssp CCCCTTHHHHHHHHHHTBSEEEEEECH
T ss_pred ccCccchHHHHHHHHHHcCEEEEEEcc
Confidence 679999999999999999999999985
No 12
>4gzv_A Hypothetical protein; AN eight-stranded beta barrel, lipocalin family, structural joint center for structural genomics, JCSG; 1.95A {Bacteroides ovatus}
Probab=20.10 E-value=88 Score=26.99 Aligned_cols=34 Identities=26% Similarity=0.408 Sum_probs=27.5
Q ss_pred cEEEEEeeceeeeEEEeeccCCCCeeeeecceEEEE
Q 019716 177 AVCILSANGAISNVTLRQAMTSGGTVTYEGRFEILS 212 (337)
Q Consensus 177 aicILSAiGAVSnVTLrq~~~sg~~~t~eG~fEILS 212 (337)
..=|||.-|.+.|+++..- .+.+++..|.|||.|
T Consensus 37 ~~KIlS~DgtF~N~~m~~~--~~aiIt~yGtY~l~S 70 (142)
T 4gzv_A 37 TFKVLSDDGRIVNFTIIPG--ADAIITGYGTYKQLT 70 (142)
T ss_dssp EEEEECTTSEEEEEECCTT--SCCEEEEEEEEEEEE
T ss_pred ceEEECCCCcEEEEEEeCC--CCcEEEEeEEEEecC
Confidence 4668999999999998442 346889999999987
Done!