Query 019717
Match_columns 337
No_of_seqs 220 out of 1161
Neff 8.4
Searched_HMMs 29240
Date Mon Mar 25 06:04:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/019717.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/019717hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gp6_A Leucoanthocyanidin diox 100.0 4E-81 1.4E-85 592.5 30.0 328 3-334 2-349 (356)
2 3oox_A Putative 2OG-Fe(II) oxy 100.0 7.2E-77 2.4E-81 554.7 27.9 290 37-330 4-309 (312)
3 1w9y_A 1-aminocyclopropane-1-c 100.0 1E-76 3.5E-81 554.2 21.4 288 38-334 2-297 (319)
4 1odm_A Isopenicillin N synthas 100.0 4.3E-72 1.5E-76 526.3 25.0 281 37-332 6-326 (331)
5 1dcs_A Deacetoxycephalosporin 100.0 2.3E-73 8E-78 530.3 15.5 279 38-332 3-307 (311)
6 3on7_A Oxidoreductase, iron/as 100.0 5.2E-68 1.8E-72 487.1 25.3 261 38-330 2-277 (280)
7 3dkq_A PKHD-type hydroxylase S 95.7 0.035 1.2E-06 48.8 8.4 79 196-292 99-194 (243)
8 2rg4_A Uncharacterized protein 94.8 0.6 2.1E-05 40.0 13.4 43 241-295 166-209 (216)
9 2hbt_A EGL nine homolog 1; pro 91.0 0.69 2.4E-05 40.5 7.9 81 197-293 118-213 (247)
10 2jig_A Prolyl-4 hydroxylase; h 86.0 2 6.8E-05 36.7 7.3 47 243-293 170-217 (224)
11 3itq_A Prolyl 4-hydroxylase, a 85.8 2.5 8.7E-05 36.1 7.8 85 197-292 112-211 (216)
12 2iuw_A Alkylated repair protei 77.6 12 0.0004 32.4 9.1 81 197-291 127-228 (238)
13 3s57_A Alpha-ketoglutarate-dep 75.7 12 0.0004 31.5 8.3 79 198-290 102-200 (204)
14 3i3q_A Alpha-ketoglutarate-dep 69.9 9.5 0.00033 32.3 6.4 78 198-291 107-201 (211)
15 2opi_A L-fuculose-1-phosphate 69.2 2.9 0.0001 35.5 3.0 36 39-74 125-160 (212)
16 1e4c_P L-fuculose 1-phosphate 63.2 4.4 0.00015 34.4 3.0 36 39-74 122-157 (215)
17 3tht_A Alkylated DNA repair pr 61.2 11 0.00037 34.6 5.4 92 197-295 199-315 (345)
18 2fk5_A Fuculose-1-phosphate al 60.6 5.1 0.00017 33.6 2.9 51 39-89 117-176 (200)
19 1pvt_A Sugar-phosphate aldolas 60.5 5.9 0.0002 34.2 3.3 37 38-74 160-196 (238)
20 1otj_A Alpha-ketoglutarate-dep 56.5 9.2 0.00032 33.6 4.0 51 38-91 16-66 (283)
21 2dbn_A Hypothetical protein YB 56.0 3 0.0001 39.6 0.7 53 37-90 98-150 (461)
22 2v9l_A Rhamnulose-1-phosphate 54.3 6.4 0.00022 34.8 2.6 36 39-74 179-214 (274)
23 3o2g_A Gamma-butyrobetaine dio 53.4 6.9 0.00024 36.4 2.8 51 39-92 122-173 (388)
24 1oih_A Putative alkylsulfatase 50.4 14 0.00046 32.9 4.1 53 37-92 25-78 (301)
25 3ocr_A Class II aldolase/adduc 46.2 11 0.00038 33.2 2.8 36 39-74 156-192 (273)
26 2irp_A Putative aldolase class 43.5 12 0.00039 31.5 2.4 50 38-88 138-192 (208)
27 1m5a_B Insulin B chain; alpha 41.6 29 0.00099 19.6 3.0 20 50-69 8-27 (30)
28 3pvj_A Alpha-ketoglutarate-dep 40.7 20 0.00069 31.5 3.6 52 38-92 14-65 (277)
29 3r1j_A Alpha-ketoglutarate-dep 37.4 30 0.001 30.8 4.2 53 37-92 19-72 (301)
30 4ay7_A Methylcobalamin\: coenz 37.0 58 0.002 29.4 6.2 42 50-91 303-348 (348)
31 3m4r_A Uncharacterized protein 30.7 22 0.00074 30.3 2.0 34 40-74 156-190 (222)
32 3ghf_A Septum site-determining 30.1 25 0.00085 26.8 2.1 44 40-83 49-93 (120)
33 3pnt_A NAD+-glycohydrolase; gl 29.2 43 0.0015 28.1 3.4 35 36-74 207-241 (268)
34 2z7b_A MLR6791 protein; class 26.5 36 0.0012 29.8 2.7 36 39-74 157-201 (270)
35 1e5r_A Proline oxidase; oxidor 26.2 55 0.0019 29.1 3.9 63 214-291 103-175 (290)
36 1nx8_A CARC, carbapenem syntha 25.0 19 0.00065 31.3 0.7 46 38-90 17-62 (273)
37 2x4k_A 4-oxalocrotonate tautom 24.6 59 0.002 20.5 3.0 24 161-184 17-40 (63)
38 1vm6_A DHPR, dihydrodipicolina 24.5 59 0.002 27.8 3.6 43 41-86 56-99 (228)
39 2da7_A Zinc finger homeobox pr 23.5 31 0.0011 23.8 1.3 41 150-190 14-54 (71)
40 4f3y_A DHPR, dihydrodipicolina 21.3 96 0.0033 27.1 4.5 43 42-87 77-120 (272)
41 3ijp_A DHPR, dihydrodipicolina 21.2 1E+02 0.0035 27.2 4.7 43 42-87 92-135 (288)
42 3qy9_A DHPR, dihydrodipicolina 21.0 1.2E+02 0.0042 25.9 5.1 40 51-90 88-127 (243)
43 2ww6_A Fibritin, T4 fibritin; 20.4 73 0.0025 17.3 2.1 14 234-247 11-24 (27)
44 3eat_X Pyoverdine biosynthesis 20.2 56 0.0019 28.8 2.8 52 38-92 29-82 (293)
No 1
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=100.00 E-value=4e-81 Score=592.54 Aligned_cols=328 Identities=39% Similarity=0.766 Sum_probs=288.2
Q ss_pred ccccccchhhhccCCCCCCCCCCC---ccccccC-CC----C----CCCCceeeCCCCC------hHHHHHHHHHHhhhc
Q 019717 3 MEVERGVQANIGSLSHSNEQVEPE---AAVRTCH-NG----T----VSEIPTIDLNDPD------QERLTGAIAEASQEW 64 (337)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~p~~---p~~~~~~-~~----~----~~~iPvIDls~l~------~~~~~~~l~~A~~~~ 64 (337)
|++.+| | +|+++|+. +||++ |...... .. . ..+||||||+.+. +.+++++|.+||++|
T Consensus 2 ~~~~~v-~-~l~~~~~~--~vP~~~~~p~~~~~~~~~~~~~~~~~~~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~ 77 (356)
T 1gp6_A 2 VAVERV-E-SLAKSGII--SIPKEYIRPKEELESINDVFLEEKKEDGPQVPTIDLKNIESDDEKIRENCIEELKKASLDW 77 (356)
T ss_dssp CCCCCH-H-HHHHTTCS--SCCGGGSCCHHHHTTCCCHHHHHHCCCSCCCCEEECTTTTCSCHHHHHHHHHHHHHHHHHT
T ss_pred CCcccH-H-HHHhcCCC--CCCHHhcCCchhcccccccccccccccCCCCCEEEchhccCCChHHHHHHHHHHHHHHHhC
Confidence 677888 8 99998866 99999 5433211 11 1 2469999999874 245889999999999
Q ss_pred cEEEEEcCCCCHHHHHHHHHHHhhhcCCCHHHHhhhcCCCCCCCccccccccccccccccccccccccccCCCCCCCCCC
Q 019717 65 GIFQVINHGIPSELINKLQGVGREFFELPQEEKEAYARPRDAKDIEGYGTRLQKEAEEKKSWVDHIFHRIWPPASRNYRF 144 (337)
Q Consensus 65 GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~GY~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~ 144 (337)
|||||+||||+.++++++++.+++||+||.|+|+++........++||+........++.||+|.|++...|.....+|.
T Consensus 78 GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~eeK~~~~~~~~~~~~~Gy~~~~~~~~~~~~d~kE~~~~~~~p~~~~~~~~ 157 (356)
T 1gp6_A 78 GVMHLINHGIPADLMERVKKAGEEFFSLSVEEKEKYANDQATGKIQGYGSKLANNASGQLEWEDYFFHLAYPEEKRDLSI 157 (356)
T ss_dssp SEEEEESCSCCHHHHHHHHHHHHHHHTSCHHHHGGGBCBGGGTBCSEEECCCCCSTTCCCCSCEEEEEEEESGGGCCGGG
T ss_pred CEEEEeCCCCCHHHHHHHHHHHHHHHCCCHHHHHhhcccccccCccccCcCcccCCCCCCChhheeeeecCCcccccccc
Confidence 99999999999999999999999999999999999987542125789976554444567899999887665544446789
Q ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHhhhcCC-CcceeEEEeecCCCCCCCCCCcccCCCCCCc
Q 019717 145 WPKNPPSYREVNEEYANCMRGVVNKLFRCLSLGLGVEGHALKEAVGGD-ELEYMLKINYYPPCPRPDLAPGLVPHTDLSS 223 (337)
Q Consensus 145 wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~-~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~ 223 (337)
||+.+++||+.+++|+++|.+|+..|+++|+++||+++++|.+.+..+ .+.+.||++|||||+.++..+|+++|||+|+
T Consensus 158 wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~ 237 (356)
T 1gp6_A 158 WPKTPSDYIEATSEYAKCLRLLATKVFKALSVGLGLEPDRLEKEVGGLEELLLQMKINYYPKCPQPELALGVEAHTDVSA 237 (356)
T ss_dssp SCCSSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTHHHHHTTHHHHCEEEEEEEEECCCSSTTTCCSEEEECCCSS
T ss_pred CCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcccCCccceeeeeecCCCCCcccccCcCCccCCCe
Confidence 999999999999999999999999999999999999999999988721 1568999999999999888899999999999
Q ss_pred eeEEeeCCCCceeEEeCCceEeeccCCCeEEEEecchhhhhhCCcccCccccccCCCCCCeeEEEEeeCCCCCc-eEecC
Q 019717 224 ITILVPNDVPGLLAFKGDRSIDVNYIPNALIVTIGDQIEILSNGKYKAVLHKATPHKEKTRISWPVFLDPPADM-VVGPL 302 (337)
Q Consensus 224 lTlL~qd~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P~~d~-~i~pl 302 (337)
||||+||.++||||+++|+|++|+|+||++|||+||+||+||||+|||+.|||+.++..+|||++||++|+.|+ +|.|+
T Consensus 238 lTlL~qd~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~d~~~i~pl 317 (356)
T 1gp6_A 238 LTFILHNMVPGLQLFYEGKWVTAKCVPDSIVMHIGDTLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPKDKIVLKPL 317 (356)
T ss_dssp EEEEEECSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCTTTCEECCC
T ss_pred EEEEEEcCCCCeEEecCCcEEECcCCCCeEEEEeccHHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCCCCcEEeCC
Confidence 99999999999999999999999999999999999999999999999999999998888999999999999999 99999
Q ss_pred CCccCCCCCCCCCCcCHHHHHHHHHHcccccc
Q 019717 303 PQLVNGKNPPKYEAKKYKDYVHFKLDELNKKW 334 (337)
Q Consensus 303 ~~~~~~~~p~~y~~~~~~e~~~~~~~~~~~~~ 334 (337)
++++++++|++|+++|++||+..++.+..+++
T Consensus 318 ~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~ 349 (356)
T 1gp6_A 318 PEMVSVESPAKFPPRTFAQHIEHKLFGKEQEE 349 (356)
T ss_dssp GGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCCCccCCCccHHHHHHHHHHhccCcc
Confidence 99999999999999999999999988776643
No 2
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=100.00 E-value=7.2e-77 Score=554.65 Aligned_cols=290 Identities=22% Similarity=0.372 Sum_probs=255.9
Q ss_pred CCCCceeeCCCC--ChHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhcCCCHHHHhhhcCCCCCCCcccccc
Q 019717 37 VSEIPTIDLNDP--DQERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFFELPQEEKEAYARPRDAKDIEGYGT 114 (337)
Q Consensus 37 ~~~iPvIDls~l--~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~GY~~ 114 (337)
+.+||||||+.+ .+++++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++.... ..++||..
T Consensus 4 ~~~iPvIDls~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi~~~~~~~~~~~~~~fF~lP~e~K~~~~~~~--~~~~Gy~~ 81 (312)
T 3oox_A 4 TSAIDPVSFSLYAKDFTRFAQELGASFERYGFAVLSDYDLDQARIDAAVDSAKAFFALPVETKKQYAGVK--GGARGYIP 81 (312)
T ss_dssp CCSSCCEETHHHHHCHHHHHHHHHHHHHHHSEEEEESCCSCHHHHHHHHHHHHHHHTSCHHHHGGGBSSG--GGTSEEEC
T ss_pred CCCCCeEEChHhcccHHHHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHhhhccCC--CCcccccc
Confidence 467999999976 36678999999999999999999999999999999999999999999999998752 25789953
Q ss_pred ccccc--ccccccccccccccc-CCCCC-----CCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhH
Q 019717 115 RLQKE--AEEKKSWVDHIFHRI-WPPAS-----RNYRFWPKNPPSYREVNEEYANCMRGVVNKLFRCLSLGLGVEGHALK 186 (337)
Q Consensus 115 ~~~~~--~~~~~~~~e~~~~~~-~p~~~-----~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~ 186 (337)
...+. .....||+|.|.+.. .+... ..+|.||+.+|+||+.+++|+++|.+|+..|+++|+++||+++++|.
T Consensus 82 ~g~e~~~~~~~~D~kE~~~~~~~~~~~~~~~~~~~~n~wP~~~p~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~ 161 (312)
T 3oox_A 82 FGVETAKGADHYDLKEFWHMGRDLPPGHRFRAHMADNVWPAEIPAFKHDVSWLYNSLDGMGGKVLEAIATYLKLERDFFK 161 (312)
T ss_dssp CCCCCSTTSCSCCCCEEEEECCCCCTTCGGGGTSCCCCCCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCTTTTH
T ss_pred ccceecCCCCCCCceeeeEeecCCCcCCcchhccCCCCCCCcCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCcCHHHHH
Confidence 32221 124679999876632 12111 23689999999999999999999999999999999999999999999
Q ss_pred hhhcCCCcceeEEEeecCCCCCCCCCCcccCCCCCCceeEEeeCCCCceeEEe-CCceEeeccCCCeEEEEecchhhhhh
Q 019717 187 EAVGGDELEYMLKINYYPPCPRPDLAPGLVPHTDLSSITILVPNDVPGLLAFK-GDRSIDVNYIPNALIVTIGDQIEILS 265 (337)
Q Consensus 187 ~~~~~~~~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~-~g~W~~V~p~pg~~vVnvGd~l~~~T 265 (337)
+.+.. +.+.||++|||||+.++..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++|||+||+||+||
T Consensus 162 ~~~~~--~~~~lr~~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~T 239 (312)
T 3oox_A 162 PTVQD--GNSVLRLLHYPPIPKDATGVRAGAHGDINTITLLLGAEEGGLEVLDRDGQWLPINPPPGCLVINIGDMLERLT 239 (312)
T ss_dssp HHHTT--CCCEEEEEEECCCSSCCC--CEEEECCCSSEEEEECCTTSCEEEECTTSCEEECCCCSSCEEEEECHHHHHHT
T ss_pred HHhcC--CcceeeeEecCCCCCCcCCcCccceecCceEEEEeEcCcCceEEECCCCcEEECCCCCCeEEEEhHHHHHHHh
Confidence 99987 6689999999999886555999999999999999999999999985 99999999999999999999999999
Q ss_pred CCcccCccccccCCC----CCCeeEEEEeeCCCCCceEecCCCccCCCCCCCCC-CcCHHHHHHHHHHcc
Q 019717 266 NGKYKAVLHKATPHK----EKTRISWPVFLDPPADMVVGPLPQLVNGKNPPKYE-AKKYKDYVHFKLDEL 330 (337)
Q Consensus 266 nG~~ks~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~-~~~~~e~~~~~~~~~ 330 (337)
||+||||.|||+.++ ..+|||++||++|+.|++|.|+++|+++++|++|+ ++|++||+..++++.
T Consensus 240 nG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~~ 309 (312)
T 3oox_A 240 NNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFASDYEIKTLQNCVTAENPDRYPESITADEFLQQRLREI 309 (312)
T ss_dssp TTSSCCCCEEECCCCGGGTTSCEEECCEEECCCTTCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHHH
T ss_pred CCeecCCCceEeCCCccCCCCCEEEEEEEecCCCCcEEecCccccCCCCcccCCCCeeHHHHHHHHHHHh
Confidence 999999999998763 56799999999999999999999999999999999 999999999999864
No 3
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=100.00 E-value=1e-76 Score=554.23 Aligned_cols=288 Identities=29% Similarity=0.536 Sum_probs=255.3
Q ss_pred CCCceeeCCCCC---hHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhcCCCHHHHhhhcCCCCCCCcccccc
Q 019717 38 SEIPTIDLNDPD---QERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFFELPQEEKEAYARPRDAKDIEGYGT 114 (337)
Q Consensus 38 ~~iPvIDls~l~---~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~GY~~ 114 (337)
.+||||||+.+. +.+++++|.+||++||||||+||||+.++++++++.+++||+||.|+|+++... .+||+.
T Consensus 2 ~~iPvIDls~l~~~~~~~~~~~l~~A~~~~GFF~v~nHGi~~~l~~~~~~~~~~FF~lP~e~K~~~~~~-----~~Gy~~ 76 (319)
T 1w9y_A 2 ENFPIISLDKVNGVERAATMEMIKDACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVA-----SKALEG 76 (319)
T ss_dssp CCCCEEEGGGGGSTTHHHHHHHHHHHHHHTSEEEEESCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHHH-----HHHHTT
T ss_pred CCCCEEECcccCcccHHHHHHHHHHHHHhCCEEEEEcCCCCHHHHHHHHHHHHHHHcCCHHHHhhhccC-----CCCCCc
Confidence 469999999863 567899999999999999999999999999999999999999999999998643 347754
Q ss_pred ccccccccccccccccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHhhhcCC-C
Q 019717 115 RLQKEAEEKKSWVDHIFHRIWPPASRNYRFWPKNPPSYREVNEEYANCMRGVVNKLFRCLSLGLGVEGHALKEAVGGD-E 193 (337)
Q Consensus 115 ~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~~~-~ 193 (337)
... ..++.||+|.|++...|. ..+|.||+.+++||+.+++|+++|.+|+..|+++|+++||+++++|.+.+... .
T Consensus 77 ~~~--e~~~~d~ke~~~~~~~p~--~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~f~~~~~~~~~ 152 (319)
T 1w9y_A 77 VQA--EVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAFYGSKG 152 (319)
T ss_dssp CCC--CGGGCCCCEEEEEEEESC--CGGGGCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCTTHHHHHHHTTTC
T ss_pred ccc--cCCCCChhhheeeecCCc--ccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHhcCcCC
Confidence 322 235789999988765553 24689999999999999999999999999999999999999999999988742 2
Q ss_pred cceeEEEeecCCCCCCCCCCcccCCCCCCceeEEeeC-CCCceeEEeCCceEeeccCCCeEEEEecchhhhhhCCcccCc
Q 019717 194 LEYMLKINYYPPCPRPDLAPGLVPHTDLSSITILVPN-DVPGLLAFKGDRSIDVNYIPNALIVTIGDQIEILSNGKYKAV 272 (337)
Q Consensus 194 ~~~~lrl~~Ypp~~~~~~~~g~~~HtD~g~lTlL~qd-~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~l~~~TnG~~ks~ 272 (337)
+.+.||++|||||+.++...|+++|||+|+||||+|| .++||||+++|+|++|+|.||++|||+||+||+||||+|||+
T Consensus 153 ~~~~lrl~~YPp~~~~~~~~g~~~HtD~g~lTlL~qd~~v~GLQV~~~g~Wi~V~p~pgalvVNiGD~l~~~SnG~~kS~ 232 (319)
T 1w9y_A 153 PNFGTKVSNYPPCPKPDLIKGLRAHTDAGGIILLFQDDKVSGLQLLKDGQWIDVPPMRHSIVVNLGDQLEVITNGKYKSV 232 (319)
T ss_dssp CEEEEEEEECCCCSCGGGGSSCCCBCCSSSEEEEEESSSCCCEEEEETTEEEECCCCTTCEEEEECHHHHHHTTTSSCCC
T ss_pred ccceeEEEecCCCcccccccccccccCCCceEEEEecCCCCeeeEeeCCeEEEcccCCCcEEEEhHHHHHHHhCCeeecc
Confidence 5689999999999998888999999999999999995 799999999999999999999999999999999999999999
Q ss_pred cccccCCCCCCeeEEEEeeCCCCCceEecCCCccCCC---CCCCCCCcCHHHHHHHHHHcccccc
Q 019717 273 LHKATPHKEKTRISWPVFLDPPADMVVGPLPQLVNGK---NPPKYEAKKYKDYVHFKLDELNKKW 334 (337)
Q Consensus 273 ~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~---~p~~y~~~~~~e~~~~~~~~~~~~~ 334 (337)
.|||+.+++.+|||++||++|+.|++|.|++++++++ +|++|+++|++||+..++++..+++
T Consensus 233 ~HRVv~~~~~~R~Sia~F~~p~~d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~ 297 (319)
T 1w9y_A 233 MHRVIAQKDGARMSLASFYNPGSDAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAK 297 (319)
T ss_dssp CEEECCCSSSCCEEEEEEEECCTTCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSH
T ss_pred cceecCCCCCCceEEEEEecCCCCCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcc
Confidence 9999998888999999999999999999999999987 5999999999999999887766543
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=100.00 E-value=4.3e-72 Score=526.25 Aligned_cols=281 Identities=24% Similarity=0.352 Sum_probs=247.8
Q ss_pred CCCCceeeCCCCC------hHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhh-cCCCHHHHhhhcCCCCCCCc
Q 019717 37 VSEIPTIDLNDPD------QERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREF-FELPQEEKEAYARPRDAKDI 109 (337)
Q Consensus 37 ~~~iPvIDls~l~------~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~f-F~lp~e~K~~~~~~~~~~~~ 109 (337)
..+||||||+.+. +.+++++|.+||++||||||+|||| +++++++.+++| |+||.|+|+++..
T Consensus 6 ~~~iPvIDls~l~~~~~~~~~~~~~~l~~A~~~~GFf~v~nHGi---l~~~~~~~~~~F~F~lP~eeK~~~~~------- 75 (331)
T 1odm_A 6 KANVPKIDVSPLFGDDQAAKMRVAQQIDAASRDTGFFYAVNHGI---NVQRLSQKTKEFHMSITPEEKWDLAI------- 75 (331)
T ss_dssp BCCCCEEECGGGGSSCHHHHHHHHHHHHHHHHTTSEEEEESCCC---CHHHHHHHHHHHHHHCCHHHHHHHBC-------
T ss_pred CCCCCEEEchHhcCCChHHHHHHHHHHHHHHHhCCEEEEEccce---eHHHHHHHHHhccCCCCHHHHHhhhh-------
Confidence 4679999999862 3457899999999999999999999 899999999999 9999999999875
Q ss_pred ccccccccc--cc------ccccccccccccccCCCC----------CCCCCCCCCC--CCchHHHHHHHHHHHHHHHHH
Q 019717 110 EGYGTRLQK--EA------EEKKSWVDHIFHRIWPPA----------SRNYRFWPKN--PPSYREVNEEYANCMRGVVNK 169 (337)
Q Consensus 110 ~GY~~~~~~--~~------~~~~~~~e~~~~~~~p~~----------~~~~~~wP~~--~~~fr~~~~~y~~~~~~l~~~ 169 (337)
+||.....+ .. .++.||+|.|++...... ..++|.||+. +++||+.+++|+++|.+|+..
T Consensus 76 ~Gy~~~~~e~~~~~~~~~~~~~~d~kE~~~~~~~~~~~~p~~~~~~~~~~~n~wP~~~~~p~fr~~~~~y~~~~~~l~~~ 155 (331)
T 1odm_A 76 RAYNKEHQDQVRAGYYLSIPGKKAVESFCYLNPNFTPDHPRIQAKTPTHEVNVWPDETKHPGFQDFAEQYYWDVFGLSSA 155 (331)
T ss_dssp TTTCTTCTTCSSSEEECCBTTTBCCEEEEECCTTCCTTSHHHHTTCTTCCCCCCCCTTTSTTHHHHHHHHHHHHHHHHHH
T ss_pred cCCCcCCccccccccccccCCCCChhheEecccCCccccccccccccccCCCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Confidence 455322111 11 146799999887543211 1247899998 999999999999999999999
Q ss_pred HHHHHHhhcCCChhhhHhhhcCCCcceeEE--EeecC------C---CCCCCC-CCcccCCCCCCceeEEeeCCCCceeE
Q 019717 170 LFRCLSLGLGVEGHALKEAVGGDELEYMLK--INYYP------P---CPRPDL-APGLVPHTDLSSITILVPNDVPGLLA 237 (337)
Q Consensus 170 ll~~l~~~Lgl~~~~~~~~~~~~~~~~~lr--l~~Yp------p---~~~~~~-~~g~~~HtD~g~lTlL~qd~~~GLqV 237 (337)
|+++|+++||+++++|.+.+.. +.+.|| ++||| | |+.++. .+|+++|||+|+||||+||+++||||
T Consensus 156 ll~~la~~Lgl~~~~f~~~~~~--~~~~lr~~l~~YP~~~~~~p~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~v~GLQV 233 (331)
T 1odm_A 156 LLKGYALALGKEENFFARHFKP--DDTLASVVLIRYPYLDPYPEAAIKTAADGTKLSFEWHEDVSLITVLYQSNVQNLQV 233 (331)
T ss_dssp HHHHHHHHTTSCTTTTGGGCCT--TTCCCEEEEEEECCCSSCCGGGCEECTTSCEEEEEEECCSSSEEEEEECSSCCEEE
T ss_pred HHHHHHHHhCCCHHHHHHHhcC--cHHHHHHHHhhCCCcccccccccCCCccccccccccccCCCeEEEEeeCCCCCEEE
Confidence 9999999999999999999887 678999 99999 7 777765 78999999999999999999999999
Q ss_pred Ee-CCceEeeccCCCeEEEEecchhhhhhCCcccCccccccCCCCCCeeEEEEeeCCCCCceEecCCCccCCCCCCCCCC
Q 019717 238 FK-GDRSIDVNYIPNALIVTIGDQIEILSNGKYKAVLHKATPHKEKTRISWPVFLDPPADMVVGPLPQLVNGKNPPKYEA 316 (337)
Q Consensus 238 ~~-~g~W~~V~p~pg~~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~~ 316 (337)
++ +| |++|+|+||++|||+||+||+||||+|||+.|||+.+ +.+|||++||++|+.|++|.|+++++++++ ++|++
T Consensus 234 ~~~~g-Wi~V~p~pgalvVNiGD~l~~~TnG~~kS~~HRVv~~-~~~R~Sia~F~~P~~d~~i~pl~~~~~~~~-~~y~~ 310 (331)
T 1odm_A 234 ETAAG-YQDIEADDTGYLINCGSYMAHLTNNYYKAPIHRVKWV-NAERQSLPFFVNLGYDSVIDPFDPREPNGK-SDREP 310 (331)
T ss_dssp EETTE-EEECCCCTTSEEEEECHHHHHHTTTSSCCCCEEEECC-CSCEEEEEEEECCCTTCBCCCCCTTSTTCC-CSSCC
T ss_pred EcCCC-eEECCCCCCeEEEEccHHHHHHhCCEeeCCCceeCCC-CCCEEEEEEEEcCCCCCEEeCCCccccccc-cCCCC
Confidence 95 88 9999999999999999999999999999999999864 789999999999999999999999998877 89999
Q ss_pred cCHHHHHHHHHHcccc
Q 019717 317 KKYKDYVHFKLDELNK 332 (337)
Q Consensus 317 ~~~~e~~~~~~~~~~~ 332 (337)
+|++||+..+++.+++
T Consensus 311 ~t~~e~l~~~~~~~~~ 326 (331)
T 1odm_A 311 LSYGDYLQNGLVSLIN 326 (331)
T ss_dssp CBHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHH
Confidence 9999999999887643
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=100.00 E-value=2.3e-73 Score=530.28 Aligned_cols=279 Identities=20% Similarity=0.313 Sum_probs=236.0
Q ss_pred CCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhcCCC-HHHHhhhcCCCCCCCcccccccc
Q 019717 38 SEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFFELP-QEEKEAYARPRDAKDIEGYGTRL 116 (337)
Q Consensus 38 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp-~e~K~~~~~~~~~~~~~GY~~~~ 116 (337)
.+||||||+.+...+..++|.+||++||||||+||||+.++++++++.+++||+|| .|+|+++..... ..++||+...
T Consensus 3 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nHGi~~~l~~~~~~~~~~fF~lP~~e~K~~~~~~~~-~~~~Gy~~~~ 81 (311)
T 1dcs_A 3 TTVPTFSLAELQQGLHQDEFRRCLRDKGLFYLTDCGLTDTELKSAKDLVIDFFEHGSEAEKRAVTSPVP-TMRRGFTGLE 81 (311)
T ss_dssp CCCCEEEHHHHHTTCSHHHHHHHHHHTCEEEEESSSCCHHHHHHHHHHHHHHHHHCCHHHHHHTBCSSC-CSSSEEEEC-
T ss_pred CCCcEEEchhhcCCCHHHHHHHHHHhCcEEEEECCCCCHHHHHHHHHHHHHHHcCCcHHHhHHhhccCC-CCCCceeecc
Confidence 46999999875321223499999999999999999999999999999999999999 999999987652 3578996543
Q ss_pred cc------ccccccccccccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCC----ChhhhH
Q 019717 117 QK------EAEEKKSWVDHIFHRIWPPASRNYRFWPKNPPSYREVNEEYANCMRGVVNKLFRCLSLGLGV----EGHALK 186 (337)
Q Consensus 117 ~~------~~~~~~~~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl----~~~~~~ 186 (337)
.+ ...+..||+|.|++... +|.|| +++||+.+++|+++|.+|+..|+++|+++||+ ++++|.
T Consensus 82 ~e~~~~~~~~~~~~d~~E~~~~~~~------~n~wP--~~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~f~ 153 (311)
T 1dcs_A 82 SESTAQITNTGSYSDYSMCYSMGTA------DNLFP--SGDFERIWTQYFDRQYTASRAVAREVLRATGTEPDGGVEAFL 153 (311)
T ss_dssp ----------------CEEEEECSS------SCCCS--CHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCTTCHHHHH
T ss_pred ccccccccCCCCCCCcceeeeccCC------CCCCC--ChHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCCcCcHhHHh
Confidence 32 22457899999887533 57899 89999999999999999999999999999999 888887
Q ss_pred hhhcCCCcceeEEEeecCCCCCCC--C--CCcccCCCCCCceeEEeeC-CCCc---eeEEeCCceEeeccCCCeEEEEec
Q 019717 187 EAVGGDELEYMLKINYYPPCPRPD--L--APGLVPHTDLSSITILVPN-DVPG---LLAFKGDRSIDVNYIPNALIVTIG 258 (337)
Q Consensus 187 ~~~~~~~~~~~lrl~~Ypp~~~~~--~--~~g~~~HtD~g~lTlL~qd-~~~G---LqV~~~g~W~~V~p~pg~~vVnvG 258 (337)
+. .+.||++|||||+.++ . .+|+++|||+|+||||+|| .++| |||+++|+|++|+|+||++|||+|
T Consensus 154 ~~------~~~lrl~~YPp~~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~v~G~~~LqV~~~g~W~~V~p~pg~lvVNiG 227 (311)
T 1dcs_A 154 DC------EPLLRFRYFPQVPEHRSAEEQPLRMAPHYDLSMVTLIQQTPCANGFVSLQAEVGGAFTDLPYRPDAVLVFCG 227 (311)
T ss_dssp SC------CCEEEEEEECC-----------CCEEEEEECSSEEEEEEECCTTCCCCEEEEETTEEEECCCCTTCEEEEEC
T ss_pred hc------chhhheecCCCCCcccccCccccccccccCCCeEEEEecCCCCCCceeEEEEeCCEEEeCcCCCCeEEEEHH
Confidence 54 4789999999998763 3 6789999999999999999 8999 999999999999999999999999
Q ss_pred chhhhhhCCcccCccccccCCC-----CCCeeEEEEeeCCCCCceEecCCCccCCCCCCCC--CCcCHHHHHHHHHHccc
Q 019717 259 DQIEILSNGKYKAVLHKATPHK-----EKTRISWPVFLDPPADMVVGPLPQLVNGKNPPKY--EAKKYKDYVHFKLDELN 331 (337)
Q Consensus 259 d~l~~~TnG~~ks~~HRVv~~~-----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y--~~~~~~e~~~~~~~~~~ 331 (337)
|+||+||||+|||+.|||+.++ ..+|||++||++|+.|++|. +++++++++|++| +++|++||+..++++..
T Consensus 228 D~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 228 AIATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNADFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCTTCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCCCcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 9999999999999999999987 77999999999999999999 9999998899999 99999999998887655
Q ss_pred c
Q 019717 332 K 332 (337)
Q Consensus 332 ~ 332 (337)
.
T Consensus 307 ~ 307 (311)
T 1dcs_A 307 R 307 (311)
T ss_dssp C
T ss_pred c
Confidence 4
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=100.00 E-value=5.2e-68 Score=487.12 Aligned_cols=261 Identities=24% Similarity=0.332 Sum_probs=223.6
Q ss_pred CCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhcCCCHHHHhhhcCCCCCCCcccccccc-
Q 019717 38 SEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFFELPQEEKEAYARPRDAKDIEGYGTRL- 116 (337)
Q Consensus 38 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~lp~e~K~~~~~~~~~~~~~GY~~~~- 116 (337)
++||||||+.. +++++|.+||++||||||+||||+.++++++++.+++||+| |+|+++..... .++||+...
T Consensus 2 ~~IPvIDls~~---~~~~~l~~A~~~~GFF~v~nHGi~~~li~~~~~~~~~FF~l--e~K~k~~~~~~--~~~GY~~~~~ 74 (280)
T 3on7_A 2 MKLETIDYRAA---DSAKRFVESLRETGFGVLSNHPIDKELVERIYTEWQAFFNS--EAKNEFMFNRE--THDGFFPASI 74 (280)
T ss_dssp --CCEEETTST---THHHHHHHHHHHHSEEEEESCSSCHHHHHHHHHHHHHHHTS--GGGGGGBCCTT--TCCEEECCC-
T ss_pred CCCCEEECCCh---hHHHHHHHHHHhCCEEEEECCCCCHHHHHHHHHHHHHHhhh--HHHHHhccCCC--CCCccccCcc
Confidence 46999999975 35789999999999999999999999999999999999998 79999876543 578996432
Q ss_pred ccc--cccccccccccccccCCCCCCCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHHHhhcCCCh--hh---hHhhh
Q 019717 117 QKE--AEEKKSWVDHIFHRIWPPASRNYRFWPKNPPSYREVNEEYANCMRGVVNKLFRCLSLGLGVEG--HA---LKEAV 189 (337)
Q Consensus 117 ~~~--~~~~~~~~e~~~~~~~p~~~~~~~~wP~~~~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~--~~---~~~~~ 189 (337)
.+. .....||+|.|.+. .||..+++||+.+++|+++|.+|+.+||++|+++||++. ++ |.+.+
T Consensus 75 ~e~~~~~~~~D~kE~~~~~----------p~~~~p~~fr~~~~~y~~~~~~l~~~ll~~la~~Lgl~~~~~~~~~~~~~~ 144 (280)
T 3on7_A 75 SETAKGHTVKDIKEYYHVY----------PWGRIPDSLRANILAYYEKANTLASELLEWIETYSPDEIKAKFSIPLPEMI 144 (280)
T ss_dssp -------CCCCSCEEEEEC----------TTSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHHTSCHHHHTTCSSCHHHHH
T ss_pred ccccCCCCcccHHHHHhcC----------CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcchhhhhHHHHHHh
Confidence 221 12367999987642 377778999999999999999999999999999999873 32 55656
Q ss_pred cCCCcceeEEEeecCCCCCCC--CCCcccCCCCCCceeEEeeCCCCceeEEe-CCceEeeccCCCeEEEEecchhhhhhC
Q 019717 190 GGDELEYMLKINYYPPCPRPD--LAPGLVPHTDLSSITILVPNDVPGLLAFK-GDRSIDVNYIPNALIVTIGDQIEILSN 266 (337)
Q Consensus 190 ~~~~~~~~lrl~~Ypp~~~~~--~~~g~~~HtD~g~lTlL~qd~~~GLqV~~-~g~W~~V~p~pg~~vVnvGd~l~~~Tn 266 (337)
... ..+.||++|||||+.++ ..+|+++|||+|+||||+||+++||||+. +|+|++|+|+||++|||+||+||+|||
T Consensus 145 ~~~-~~~~lr~~~YP~~~~~~~~~~~g~~~HtD~g~lTlL~qd~~~GLqV~~~~g~W~~V~p~pg~~vVNiGD~l~~~Tn 223 (280)
T 3on7_A 145 ANS-HKTLLRILHYPPMTGDEEMGAIRAAAHEDINLITVLPTANEPGLQVKAKDGSWLDVPSDFGNIIINIGDMLQEASD 223 (280)
T ss_dssp TTC-SSCEEEEEEECCCCTTCCCCSEEEEEECCCSSEEEEECCSCCCEEEECTTSCEEECCCCTTCEEEEECHHHHHHTT
T ss_pred cCC-ccceEEEEECCCCCCccccCcccccCCCCCCeEEEEEecCCCCeEEEcCCCCEEECcCCCCEEEEEcChHHHHHhC
Confidence 552 34899999999998754 46899999999999999999999999996 999999999999999999999999999
Q ss_pred CcccCccccccCCC----CCCeeEEEEeeCCCCCceEecCCCccCCCCCCCCCCcCHHHHHHHHHHcc
Q 019717 267 GKYKAVLHKATPHK----EKTRISWPVFLDPPADMVVGPLPQLVNGKNPPKYEAKKYKDYVHFKLDEL 330 (337)
Q Consensus 267 G~~ks~~HRVv~~~----~~~R~Si~~F~~P~~d~~i~pl~~~~~~~~p~~y~~~~~~e~~~~~~~~~ 330 (337)
|+|||+.|||+.++ ..+|||++||++|+.|++|.| ++|++||+.+|+++.
T Consensus 224 g~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~d~~i~p--------------~ita~~~l~~rl~~~ 277 (280)
T 3on7_A 224 GYFPSTSHRVINPEGTDKTKSRISLPLFLHPHPSVVLSE--------------RYTADSYLMERLREL 277 (280)
T ss_dssp TSSCCCCEEEECCTTCCTTSCEEECCEEECCCTTCBCSS--------------SCBHHHHHHHHHHHT
T ss_pred CcccCCCceEeCCCCCCCCCCeEEEEEEEcCCCCCEECC--------------CccHHHHHHHHHHHh
Confidence 99999999998864 468999999999999999974 489999999999875
No 7
>3dkq_A PKHD-type hydroxylase SBAL_3634; putative oxygenase, structural genomics, JOI for structural genomics, JCSG; 2.26A {Shewanella baltica OS155}
Probab=95.71 E-value=0.035 Score=48.83 Aligned_cols=79 Identities=16% Similarity=0.159 Sum_probs=54.3
Q ss_pred eeEEEeecCCCCCCCCCCcccCCCCCC-----------ceeEEee--C----CCCceeEEeCCceEeeccCCCeEEEEec
Q 019717 196 YMLKINYYPPCPRPDLAPGLVPHTDLS-----------SITILVP--N----DVPGLLAFKGDRSIDVNYIPNALIVTIG 258 (337)
Q Consensus 196 ~~lrl~~Ypp~~~~~~~~g~~~HtD~g-----------~lTlL~q--d----~~~GLqV~~~g~W~~V~p~pg~~vVnvG 258 (337)
.-+++++|.+-. -..+|.|.. .+|+++. + ..|.|.+.....=..|+|..|.+|+.-.
T Consensus 99 e~~~~~rY~~G~------~y~~H~D~~~~~~~~~~~~r~~T~~lYLndp~~~~GGetvf~~~~~~~~V~P~~G~~v~F~s 172 (243)
T 3dkq_A 99 YPPLFNRYQGGE------TFGYHIDNAIRSTPDGMIRTDLSATLFLSEPENYQGGELVIQDTYGQQSIKLSAGSLVLYPS 172 (243)
T ss_dssp EEEEEEEECTTC------EEEEECBCSEEEETTEEEECCEEEEEECSCGGGEEECCEEEEETTEEEEECCCTTCEEEEET
T ss_pred ccceEEEECCCC------eeccCCCCCCCCCCCccccceEEEEEEeCCCCCCCCceEEEeeCCCcEEEecCCCEEEEECC
Confidence 458899998742 256677753 4566554 3 1244666664334679999999998643
Q ss_pred chhhhhhCCcccCccccccCCCCCCeeEEEEeeC
Q 019717 259 DQIEILSNGKYKAVLHKATPHKEKTRISWPVFLD 292 (337)
Q Consensus 259 d~l~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~ 292 (337)
.++|+|.+-....|++++.+++
T Consensus 173 ------------~~lH~v~pV~~G~R~~~~~Wi~ 194 (243)
T 3dkq_A 173 ------------SSLHQVTPVLSGERTAAFMWLQ 194 (243)
T ss_dssp ------------TSEEEECCEEEECEEEEEEEEE
T ss_pred ------------CCeEcCccccccCEEEEEEehh
Confidence 3689998765568999998876
No 8
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=94.83 E-value=0.6 Score=40.03 Aligned_cols=43 Identities=14% Similarity=-0.067 Sum_probs=34.0
Q ss_pred CceEeeccCCCeEEEEecchhhhhhCCcccCccccccCCC-CCCeeEEEEeeCCCC
Q 019717 241 DRSIDVNYIPNALIVTIGDQIEILSNGKYKAVLHKATPHK-EKTRISWPVFLDPPA 295 (337)
Q Consensus 241 g~W~~V~p~pg~~vVnvGd~l~~~TnG~~ks~~HRVv~~~-~~~R~Si~~F~~P~~ 295 (337)
..+..|.|.+|.+||.-+.+ .|+|.... ..+|+||+|.+.+..
T Consensus 166 ~~~~~i~P~~G~lvlFpS~l------------~H~V~p~~~~~~RiSIsFN~~~~~ 209 (216)
T 2rg4_A 166 RTFRSVAPKVGDVLLWESWL------------RHEVPMNMAEEDRISVSFNYAWGE 209 (216)
T ss_dssp CSEEEECCCTTEEEEEETTS------------CEEECCCCSSSCEEEEEEEEEC--
T ss_pred CCeeEecCCCCeEEEECCCC------------EEeccCCCCCCCEEEEEEEeecCC
Confidence 35678999999999987754 69998855 468999999988764
No 9
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=90.98 E-value=0.69 Score=40.53 Aligned_cols=81 Identities=21% Similarity=0.195 Sum_probs=55.1
Q ss_pred eEEEeecCCCCCCCCCCcccCCCCCC-----ceeEEee--C-C-----CCceeEEeCC--ceEeeccCCCeEEEEecchh
Q 019717 197 MLKINYYPPCPRPDLAPGLVPHTDLS-----SITILVP--N-D-----VPGLLAFKGD--RSIDVNYIPNALIVTIGDQI 261 (337)
Q Consensus 197 ~lrl~~Ypp~~~~~~~~g~~~HtD~g-----~lTlL~q--d-~-----~~GLqV~~~g--~W~~V~p~pg~~vVnvGd~l 261 (337)
-+.+.+|++. .-...+|.|.. .+|+++. + . .|-|.+..++ ....|.|..|.+|+.-.+.
T Consensus 118 e~~~~~Y~~~-----G~~y~~H~D~~~~~~R~~T~vlYLN~~w~~~~~GG~l~~~~~~~~~~~~v~P~~grlv~F~s~~- 191 (247)
T 2hbt_A 118 KAMVACYPGN-----GTGYVRHVDNPNGDGRCVTCIYYLNKDWDAKVSGGILRIFPEGKAQFADIEPKFDRLLFFWSDR- 191 (247)
T ss_dssp CEEEEEECSS-----SCCEEEECSSCSCCSEEEEEEEECBTTCCHHHHBCCEEECCTTCSSCEEECCBTTEEEEEECST-
T ss_pred eEEEEEecCC-----CCcccccccCCCCCCceEEEEEEeCCCCCCCCCceeEEEecCCCCceEEEEcCCCEEEEEecCC-
Confidence 3567889861 12356777763 5787765 2 1 2346777643 5789999999999887532
Q ss_pred hhhhCCcccCccccccCCCCCCeeEEEEeeCC
Q 019717 262 EILSNGKYKAVLHKATPHKEKTRISWPVFLDP 293 (337)
Q Consensus 262 ~~~TnG~~ks~~HRVv~~~~~~R~Si~~F~~P 293 (337)
-.+|.|.. ....|+||+..++-
T Consensus 192 ---------~~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 192 ---------RNPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp ---------TCCEEECC-BSSCEEEEEEEEEE
T ss_pred ---------Cceeeecc-CCCEEEEEEEEEcC
Confidence 15899976 45699999886643
No 10
>2jig_A Prolyl-4 hydroxylase; hydrolase; HET: PD2; 1.85A {Chlamydomonas reinhardtii} PDB: 3gze_A 2v4a_A 2jij_A
Probab=85.99 E-value=2 Score=36.73 Aligned_cols=47 Identities=17% Similarity=0.252 Sum_probs=33.5
Q ss_pred eEeeccCCCeEEEEecchhhhhhCCcc-cCccccccCCCCCCeeEEEEeeCC
Q 019717 243 SIDVNYIPNALIVTIGDQIEILSNGKY-KAVLHKATPHKEKTRISWPVFLDP 293 (337)
Q Consensus 243 W~~V~p~pg~~vVnvGd~l~~~TnG~~-ks~~HRVv~~~~~~R~Si~~F~~P 293 (337)
-+.|.|..|.+|+.-- ...+|.. ..++|+|..-....|+++..+++-
T Consensus 170 ~~~V~P~~G~al~f~~----~~~~g~~d~~~lH~~~PV~~G~K~~~~~Wi~~ 217 (224)
T 2jig_A 170 GLAVKPIKGDALMFYS----LKPDGSNDPASLHGSCPTLKGDKWSATKWIHV 217 (224)
T ss_dssp SEEECCCTTCEEEEES----BCTTSCBCGGGCEEECCEEESEEEEEEEEEES
T ss_pred ceEEecccCcEEEEEe----eCCCCCCCCCCcccCCccccceEEEEEEeEEc
Confidence 4789999999888653 1123432 568999977555689999888754
No 11
>3itq_A Prolyl 4-hydroxylase, alpha subunit domain protei; double-stranded beta helix, alpha-keto dependent non-heme iron oxygenase; 1.40A {Bacillus anthracis str}
Probab=85.84 E-value=2.5 Score=36.12 Aligned_cols=85 Identities=14% Similarity=0.069 Sum_probs=52.2
Q ss_pred eEEEeecCCCCCCCCCCcccCCCCCC-----------ceeEEee--C-CCCceeEEeCCceEeeccCCCeEEEEecchhh
Q 019717 197 MLKINYYPPCPRPDLAPGLVPHTDLS-----------SITILVP--N-DVPGLLAFKGDRSIDVNYIPNALIVTIGDQIE 262 (337)
Q Consensus 197 ~lrl~~Ypp~~~~~~~~g~~~HtD~g-----------~lTlL~q--d-~~~GLqV~~~g~W~~V~p~pg~~vVnvGd~l~ 262 (337)
.+++++|.+... ..+|.|+. .+|+++. | ..||=-+..+. =+.|.|..|.+|+.-.-.
T Consensus 112 ~lqv~~Y~~G~~------y~~H~D~~~~~~~~~~~~R~~T~l~YLnd~~~GGeT~Fp~~-~~~V~P~~G~al~f~~~~-- 182 (216)
T 3itq_A 112 GLHILNYEVDQQ------YKAHYDYFAEHSRSAANNRISTLVMYLNDVEEGGETFFPKL-NLSVHPRKGMAVYFEYFY-- 182 (216)
T ss_dssp CCEEEEECBTCC------EEEECSSCCTTSGGGGGCEEEEEEEECSCCSEECCEEETTT-TEEECCCTTCEEEEECCC--
T ss_pred ceeEEEeCCCCc------cccccCCCcCCCcccCCceEEEEEEecccCCcCceeEecCC-CCEEecCCCeEEEEeccC--
Confidence 477888876432 45676653 3777765 2 22332232221 277899999988765411
Q ss_pred hhhCCc-ccCccccccCCCCCCeeEEEEeeC
Q 019717 263 ILSNGK-YKAVLHKATPHKEKTRISWPVFLD 292 (337)
Q Consensus 263 ~~TnG~-~ks~~HRVv~~~~~~R~Si~~F~~ 292 (337)
.+|. -..++|+|.+-....|+++..+++
T Consensus 183 --~~g~~d~~~lH~~~PV~~G~K~v~~~W~~ 211 (216)
T 3itq_A 183 --QDQSLNELTLHGGAPVTKGEKWIATQWVR 211 (216)
T ss_dssp --SSHHHHHTTCEEECCEEESCEEEEEEEEE
T ss_pred --CCCCCCCccccccceeccccEEEEEeeEe
Confidence 1222 145899998755568999988765
No 12
>2iuw_A Alkylated repair protein ALKB homolog 3; oxidoreductase, DNA/RNA repair, demethylase, beta jellyroll; HET: AKG; 1.50A {Homo sapiens} SCOP: b.82.2.10
Probab=77.57 E-value=12 Score=32.36 Aligned_cols=81 Identities=12% Similarity=0.086 Sum_probs=52.3
Q ss_pred eEEEeecCCCCCCCCCCcccCCCCCC--------ceeEEeeCCCCceeEEe-C----------CceEeeccCCCeEEEEe
Q 019717 197 MLKINYYPPCPRPDLAPGLVPHTDLS--------SITILVPNDVPGLLAFK-G----------DRSIDVNYIPNALIVTI 257 (337)
Q Consensus 197 ~lrl~~Ypp~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~-~----------g~W~~V~p~pg~~vVnv 257 (337)
.+-+|+|.+-. -++++|.|-- +.||-+-.. .=+.+.. . +..+.+...+|+++|.-
T Consensus 127 ~~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IaslSLG~~-~~f~f~~~~~~~~~~~~~~~~~~~i~L~~gsllvM~ 200 (238)
T 2iuw_A 127 SLLCNLYRNEK-----DSVDWHSDDEPSLGRCPIIASLSFGAT-RTFEMRKKPPPEENGDYTYVERVKIPLDHGTLLIME 200 (238)
T ss_dssp EEEEEEECSTT-----CCEEEECCCCGGGCSSCCEEEEEEESC-EEEEEEECCC--------CCCEEEEEECTTCEEEEE
T ss_pred EEEEEEECCCC-----CceeCCcCChhhcCCCCcEEEEECCCC-EEEEEeccCCccccCcccCCceEEEEcCCCCEEEEC
Confidence 34589998742 2588888842 333333211 2233332 1 46889999999999999
Q ss_pred cchhhhhhCCcccCccccccCC--CCCCeeEEEEee
Q 019717 258 GDQIEILSNGKYKAVLHKATPH--KEKTRISWPVFL 291 (337)
Q Consensus 258 Gd~l~~~TnG~~ks~~HRVv~~--~~~~R~Si~~F~ 291 (337)
|++=..|. |.|... ....|+|+.|=.
T Consensus 201 G~~r~~w~--------H~I~~~~~~~~~RIsLTfR~ 228 (238)
T 2iuw_A 201 GATQADWQ--------HRVPKEYHSREPRVNLTFRT 228 (238)
T ss_dssp ETHHHHEE--------EEECCCSSCCCCEEEEEEEC
T ss_pred hhhhCccE--------ecCCCcCCCCCCEEEEEeee
Confidence 99877776 444322 356899999865
No 13
>3s57_A Alpha-ketoglutarate-dependent dioxygenase ALKB HO; protein-DNA complex, jelly-roll fold, dioxygenase, dsDNA BIN plasma, oxidoreductase-DNA complex; HET: AKG; 1.60A {Homo sapiens} PDB: 3s5a_A* 3rzg_A 3rzl_A 3rzh_A* 3rzj_A* 3rzk_A* 3rzm_A 3bty_A* 3buc_A* 3h8r_A* 3h8o_A* 3h8x_A* 3btx_A* 3bu0_A* 3btz_A*
Probab=75.70 E-value=12 Score=31.54 Aligned_cols=79 Identities=11% Similarity=0.064 Sum_probs=50.5
Q ss_pred EEEeecCCCCCCCCCCcccCCCCCC--------ceeEEeeCCCCceeEEe----------CCceEeeccCCCeEEEEecc
Q 019717 198 LKINYYPPCPRPDLAPGLVPHTDLS--------SITILVPNDVPGLLAFK----------GDRSIDVNYIPNALIVTIGD 259 (337)
Q Consensus 198 lrl~~Ypp~~~~~~~~g~~~HtD~g--------~lTlL~qd~~~GLqV~~----------~g~W~~V~p~pg~~vVnvGd 259 (337)
+-+|+|.+.. -++++|.|-. +.+|-+-. ..-+.+.. .+..+.+...+|+++|.-|+
T Consensus 102 ~LvN~Y~~G~-----d~i~~H~D~~~~~~~~~~IasvSLG~-~~~f~~~~~~~~~~~~~~~~~~~~~~L~~GsllvM~g~ 175 (204)
T 3s57_A 102 VLINRYKDGS-----DHICEHRDDERELAPGSPIASVSFGA-SRDFVFRHKDSRGKSPSRRVAVVRLPLAHGSLLMMNHP 175 (204)
T ss_dssp EEEEEESSTT-----CCEEEECCCCTTBCTTCCEEEEEEES-CEEEEEEEGGGCSSSCSCCCCCEEEEECTTEEEEEETT
T ss_pred eEEEEECCCC-----CcccceecChhhccCCCcEEEEECCC-ceEEEEEEcCCCccccccCCceEEEECCCCCEEEECch
Confidence 4489998743 2588888862 22332221 12244432 12578899999999999999
Q ss_pred hhhhhhCCcccCccccccCCC--CCCeeEEEEe
Q 019717 260 QIEILSNGKYKAVLHKATPHK--EKTRISWPVF 290 (337)
Q Consensus 260 ~l~~~TnG~~ks~~HRVv~~~--~~~R~Si~~F 290 (337)
+=..|. |.|-... ...|+|+.|-
T Consensus 176 ~q~~w~--------H~Ip~~~~~~~~RislTFR 200 (204)
T 3s57_A 176 TNTHWY--------HSLPVRKKVLAPRVNLTFR 200 (204)
T ss_dssp HHHHEE--------EEECCCTTCCSCEEEEEEE
T ss_pred hhheeE--------eeccccCCCCCCEEEEEee
Confidence 877776 6654422 4679999874
No 14
>3i3q_A Alpha-ketoglutarate-dependent dioxygenase ALKB; beta jellyroll, DNA damage, DNA repair, iron, M binding, oxidoreductase; HET: AKG; 1.40A {Escherichia coli} SCOP: b.82.2.10 PDB: 2fd8_A* 2fdg_A* 2fdh_A* 2fdf_A* 2fdj_A 2fdk_A* 2fdi_A* 3i2o_A* 3i3m_A* 3i49_A* 3t4h_B* 3t3y_A* 3t4v_A* 3o1t_A* 3o1o_A* 3o1m_A* 3o1r_A* 3o1s_A* 3o1p_A* 3o1u_A* ...
Probab=69.89 E-value=9.5 Score=32.35 Aligned_cols=78 Identities=19% Similarity=0.131 Sum_probs=49.5
Q ss_pred EEEeecCCCCCCCCCCcccCCCCC-----C--ceeEEeeCCCCceeEEe---CCceEeeccCCCeEEEEecchhhhhhCC
Q 019717 198 LKINYYPPCPRPDLAPGLVPHTDL-----S--SITILVPNDVPGLLAFK---GDRSIDVNYIPNALIVTIGDQIEILSNG 267 (337)
Q Consensus 198 lrl~~Ypp~~~~~~~~g~~~HtD~-----g--~lTlL~qd~~~GLqV~~---~g~W~~V~p~pg~~vVnvGd~l~~~TnG 267 (337)
+-+|+|.+- . ++++|.|- + ++|+-+-. ..-+.+.. ++..+.+...+|+++|.-|++- .|
T Consensus 107 ~LvN~Y~~G-----~-~i~~H~D~~e~~~~~pI~svSLG~-~~~f~f~~~~~~~~~~~i~L~~GsllvM~G~~r-~~--- 175 (211)
T 3i3q_A 107 CLINRYAPG-----A-KLSLHQDKDEPDLRAPIVSVSLGL-PAIFQFGGLKRNDPLKRLLLEHGDVVVWGGESR-LF--- 175 (211)
T ss_dssp EEEEEECTT-----C-CEEEECCCCCSCTTSCEEEEEEES-CEEEEECCSSTTSCCEEEEECTTCEEEECGGGT-TC---
T ss_pred EEEEEEcCC-----C-CcccccCCCccccCCCEEEEECCC-CeEEEEecccCCCceEEEECCCCCEEEECchHH-ce---
Confidence 458899873 2 68999982 2 22333322 12344432 3568889999999999988872 22
Q ss_pred cccCccccccCCC-------CCCeeEEEEee
Q 019717 268 KYKAVLHKATPHK-------EKTRISWPVFL 291 (337)
Q Consensus 268 ~~ks~~HRVv~~~-------~~~R~Si~~F~ 291 (337)
.|.|.... +..|+|+.|-.
T Consensus 176 -----~H~I~~~~~~~~p~~~~~RIsLTFR~ 201 (211)
T 3i3q_A 176 -----YHGIQPLKAGFHPLTIDCRYNLTFRQ 201 (211)
T ss_dssp -----CEEECCCCCCCBTTTBTCEEEEEEEC
T ss_pred -----EeccCcccCCcCCCCCCCEEEEEeee
Confidence 37775533 24699998854
No 15
>2opi_A L-fuculose-1-phosphate aldolase; L-fuculose-1-phosphate aldolas structural genomics, PSI-2, protein structure initiative; 2.50A {Bacteroides thetaiotaomicron}
Probab=69.20 E-value=2.9 Score=35.46 Aligned_cols=36 Identities=33% Similarity=0.463 Sum_probs=32.1
Q ss_pred CCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCC
Q 019717 39 EIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGI 74 (337)
Q Consensus 39 ~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi 74 (337)
.||++++.....+++++.+.+++.+.-.+.|.|||+
T Consensus 125 ~v~~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 160 (212)
T 2opi_A 125 EIPVIPYYRPGSPELAKAVVEAMLKHNSVLLTNHGQ 160 (212)
T ss_dssp CCCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CeEEEcCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999987777788999999999888999999996
No 16
>1e4c_P L-fuculose 1-phosphate aldolase; aldolase (class II), bacterial L-fucose metabolism; 1.66A {Escherichia coli} SCOP: c.74.1.1 PDB: 1fua_A 2fua_A 3fua_A 4fua_A* 1dzv_P 1e4b_P 1e47_P* 1e48_P* 1dzz_P 1e46_P 1dzu_P 1dzy_P 1dzx_P 1dzw_P 1e49_P 1e4a_P
Probab=63.18 E-value=4.4 Score=34.42 Aligned_cols=36 Identities=19% Similarity=0.234 Sum_probs=31.8
Q ss_pred CCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCC
Q 019717 39 EIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGI 74 (337)
Q Consensus 39 ~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi 74 (337)
.||++++......++++.+.+++.+.-.+.|.|||+
T Consensus 122 ~ip~~~y~~~g~~~la~~i~~~l~~~~avll~nHG~ 157 (215)
T 1e4c_P 122 SIPCAPYATFGTRELSEHVALALKNRKATLLQHHGL 157 (215)
T ss_dssp CBCEECCCCTTCHHHHHHHHHHTSSCSEEEETTTEE
T ss_pred CcceeeCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 699999988777788899999999888899999996
No 17
>3tht_A Alkylated DNA repair protein ALKB homolog 8; structural genomics, PSI-biology, northeast structural genom consortium, NESG; HET: AKG; 3.01A {Homo sapiens} PDB: 3thp_A*
Probab=61.22 E-value=11 Score=34.57 Aligned_cols=92 Identities=16% Similarity=0.169 Sum_probs=58.5
Q ss_pred eEEEeecCCCCCCCCCCcccCCCCCC------ceeEEeeCCCCceeEEe-CCceEeeccCCCeEEEEecchhhhhhCCcc
Q 019717 197 MLKINYYPPCPRPDLAPGLVPHTDLS------SITILVPNDVPGLLAFK-GDRSIDVNYIPNALIVTIGDQIEILSNGKY 269 (337)
Q Consensus 197 ~lrl~~Ypp~~~~~~~~g~~~HtD~g------~lTlL~qd~~~GLqV~~-~g~W~~V~p~pg~~vVnvGd~l~~~TnG~~ 269 (337)
.+-+|+|.+- -++++|.|-. +.||=+- ...-+.+.. +|.++.+...+|+++|.-|++=..|.-|.-
T Consensus 199 ~~lvN~Y~~G------~~I~~H~D~~~~~~~~I~slSLG-~~~~f~f~~~~~~~~~l~L~~gsLlvM~G~~r~~w~H~I~ 271 (345)
T 3tht_A 199 QMTINQYEPG------QGIPAHIDTHSAFEDEIVSLSLG-SEIVMDFKHPDGIAVPVMLPRRSLLVMTGESRYLWTHGIT 271 (345)
T ss_dssp EEEEEEECTT------CCEEEECCCTTTBCSCEEEEEES-SCEEEEEECTTSCEEEEEECTTEEEEECTHHHHTSEEEEC
T ss_pred EEEEEEecCC------CCEeeccCCchhcCCeEEEEECC-CceeEEEccCCCceEEEEcCCCcEEEEChHHhhceEccCC
Confidence 4558899872 2689999874 2233221 112344443 677999999999999999999888865544
Q ss_pred cCcccccc------------------CCCCCCeeEEEEeeCCCC
Q 019717 270 KAVLHKAT------------------PHKEKTRISWPVFLDPPA 295 (337)
Q Consensus 270 ks~~HRVv------------------~~~~~~R~Si~~F~~P~~ 295 (337)
+-...-+- ......|+|+.|=.-+..
T Consensus 272 ~~~~d~~~~~~~~~~~~~~~~~~~~~~~~r~~RiSlT~R~v~~~ 315 (345)
T 3tht_A 272 CRKFDTVQASESLKSGIITSDVGDLTLSKRGLRTSFTFRKVRQT 315 (345)
T ss_dssp CCSEEEEESGGGSSCEECCSSSSCEEEEECCCEEEEEEECBCSS
T ss_pred cccCCccCcccccccccccccCCCceeccCCCEEEEEEEecCCC
Confidence 33222211 011346999999876654
No 18
>2fk5_A Fuculose-1-phosphate aldolase; class II aldolase, metal binding, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Thermus thermophilus} PDB: 2flf_A
Probab=60.60 E-value=5.1 Score=33.64 Aligned_cols=51 Identities=22% Similarity=0.243 Sum_probs=38.8
Q ss_pred CCcee-eCCCCChHHHHHHHHHHhhhccEEEEEcCCCC--H------HHHHHHHHHHhhh
Q 019717 39 EIPTI-DLNDPDQERLTGAIAEASQEWGIFQVINHGIP--S------ELINKLQGVGREF 89 (337)
Q Consensus 39 ~iPvI-Dls~l~~~~~~~~l~~A~~~~GFf~l~nhgi~--~------~~~~~~~~~~~~f 89 (337)
.||++ ++.....+++++.+.+++.+.-.+.|.|||+= - +.+++++..+..+
T Consensus 117 ~ip~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~~~~G~~~~~~~~~~eA~~~~~~l 176 (200)
T 2fk5_A 117 EVPVLAPKTVSATEEAALSVAEALREHRACLLRGHGAFAVGLKEAPEEALLEAYGLMTTL 176 (200)
T ss_dssp CEEEECCSCCSSSHHHHHHHHHHHHHCSEEEETTTEEEEEECCSSHHHHHHHHHHHHHHH
T ss_pred CceEecCCCCCCcHHHHHHHHHHhCcCCEEEECCCCcEEEeCCCCCcCcHHHHHHHHHHH
Confidence 69999 88877777888999999998889999999951 1 3455555555443
No 19
>1pvt_A Sugar-phosphate aldolase; structural genomics, PSI, protein initiative, midwest center for structural genomics, MCSG; 2.50A {Thermotoga maritima} SCOP: c.74.1.1
Probab=60.45 E-value=5.9 Score=34.17 Aligned_cols=37 Identities=19% Similarity=0.251 Sum_probs=32.4
Q ss_pred CCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCC
Q 019717 38 SEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGI 74 (337)
Q Consensus 38 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi 74 (337)
..||++++.....+++++++.+++++.-.+.+.|||+
T Consensus 160 ~~v~~~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 196 (238)
T 1pvt_A 160 QGISVVEFEKPGSVELGLKTVEKSEGKDAVLWDKHGV 196 (238)
T ss_dssp SCCEEECCCSTTCHHHHHHHHHHTSSCSEEEETTSCE
T ss_pred CCceEecCCCCCcHHHHHHHHHHhccCCEEEEcCCCc
Confidence 3699999987777788899999999988999999996
No 20
>1otj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, alpha ketoglutarate-dependent dioxygenase, oxidoreductase; 1.90A {Escherichia coli} SCOP: b.82.2.5 PDB: 1gqw_A* 1os7_A* 1gy9_A
Probab=56.54 E-value=9.2 Score=33.59 Aligned_cols=51 Identities=16% Similarity=0.245 Sum_probs=38.5
Q ss_pred CCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhcC
Q 019717 38 SEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFFE 91 (337)
Q Consensus 38 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~ 91 (337)
++|+-||++..-.++..++|.+++.++|++.+.+..++.+ ...+.++.|-.
T Consensus 16 aei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~frg~~~~~~---~~~~~~~~~G~ 66 (283)
T 1otj_A 16 AQISGADLTRPLSDNQFEQLYHAVLRHQVVFLRDQAITPQ---QQRALAQRFGE 66 (283)
T ss_dssp EEEESCCSSSCCCHHHHHHHHHHHHHHSEEEECSCCCCHH---HHHHHHHTTSC
T ss_pred EEEECCCcCccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCC
Confidence 4577789988435667899999999999999999888764 34445666644
No 21
>2dbn_A Hypothetical protein YBIU; alpha/beta structure, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.70A {Escherichia coli} PDB: 2dbi_A 2csg_A*
Probab=56.05 E-value=3 Score=39.61 Aligned_cols=53 Identities=15% Similarity=0.181 Sum_probs=39.6
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhc
Q 019717 37 VSEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFF 90 (337)
Q Consensus 37 ~~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 90 (337)
..-||.||++.+....+.+...+.+++.|++.|.|. ||.+...+..+.+.+|.
T Consensus 98 ~~~iP~i~f~di~~~~~s~~~~~~ir~rG~vVIRgv-vp~e~A~~~~~~~~~yl 150 (461)
T 2dbn_A 98 DAVWPVLSYADIKAGHVTAEQREQIKRRGCAVIKGH-FPREQALGWDQSMLDYL 150 (461)
T ss_dssp CCSSCEEEHHHHHHTCCCHHHHHHHHHHSEEEEETS-SCHHHHHHHHHHHHHHH
T ss_pred CCCcceecHHHhcCCCCCHHHHHHHHhccEEEECCC-CCHHHHHHHHHHHHHHH
Confidence 456999999875332233556678899999999886 89888877777777764
No 22
>2v9l_A Rhamnulose-1-phosphate aldolase; entropy index, metal-binding, oligomerization, zinc, lyase, class II, cytoplasm; HET: PGO; 1.23A {Escherichia coli} PDB: 2uyv_A* 1ojr_A 2v9g_A* 1gt7_A* 2v9n_A* 2uyu_A* 2v9m_A* 2v9o_A 2v9e_A 2v9f_A 2v9i_A 2v29_A 2v2a_A* 2v2b_A
Probab=54.34 E-value=6.4 Score=34.78 Aligned_cols=36 Identities=17% Similarity=0.221 Sum_probs=32.2
Q ss_pred CCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCC
Q 019717 39 EIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGI 74 (337)
Q Consensus 39 ~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi 74 (337)
.||++++......++++.+.+++++.-.+.+.|||+
T Consensus 179 ~v~v~~y~~~g~~ela~~i~~~l~~~~avll~nHG~ 214 (274)
T 2v9l_A 179 GVGILPWMVPGTDAIGQATAQEMQKHSLVLWPFHGV 214 (274)
T ss_dssp CEEECCCCCSSSHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred ceeEecCCCCCCHHHHHHHHHHHccCCEEEEcCCCc
Confidence 699999987777788999999999999999999996
No 23
>3o2g_A Gamma-butyrobetaine dioxygenase; gamma-butyrobetaine hydroxylase, 2-OXOG dioxygenase 1, oxidoreductase, structural genomics; HET: OGA NM2; 1.78A {Homo sapiens} PDB: 3ms5_A* 3n6w_A
Probab=53.44 E-value=6.9 Score=36.41 Aligned_cols=51 Identities=16% Similarity=0.223 Sum_probs=40.0
Q ss_pred CCceeeCCCC-ChHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhcCC
Q 019717 39 EIPTIDLNDP-DQERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFFEL 92 (337)
Q Consensus 39 ~iPvIDls~l-~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~l 92 (337)
++|.||++.+ .+++.+.++.+|+.++|++.+.|..++.+. ..+.++.|-.+
T Consensus 122 ~~~~~~~~~~l~~d~~~~~~~~~l~~~Gvv~frg~~~~~~~---~~~~a~~~G~l 173 (388)
T 3o2g_A 122 QLPTLDFEDVLRYDEHAYKWLSTLKKVGIVRLTGASDKPGE---VSKLGKRMGFL 173 (388)
T ss_dssp CCCEEEHHHHHHCHHHHHHHHHHHHHHSEEEEECCCSSTTH---HHHHHHHHSCC
T ss_pred CCCccCHHHHhcCHHHHHHHHHHHHhcCEEEEeCCCCCHHH---HHHHHHHhCCC
Confidence 7999999875 356778999999999999999999887643 44556666544
No 24
>1oih_A Putative alkylsulfatase ATSK; non-heme Fe(II) alphaketoglutarate dependent dioxygenase, jelly roll, oxidoreductase; 1.89A {Pseudomonas putida} SCOP: b.82.2.5 PDB: 1oii_A* 1oij_B* 1vz4_A 1vz5_A 1oik_A* 1oij_A* 1oij_C*
Probab=50.37 E-value=14 Score=32.88 Aligned_cols=53 Identities=15% Similarity=0.107 Sum_probs=40.2
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCC-CCHHHHHHHHHHHhhhcCC
Q 019717 37 VSEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHG-IPSELINKLQGVGREFFEL 92 (337)
Q Consensus 37 ~~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhg-i~~~~~~~~~~~~~~fF~l 92 (337)
.++|+-||++..-.++..++|.+++.++|++.+.+.. ++. +...+.++.|-.+
T Consensus 25 Gaei~gvdl~~~l~~~~~~~l~~~l~~~Gvv~fRg~~~l~~---~~~~~~~~~fG~l 78 (301)
T 1oih_A 25 GAEIRGVKLSPDLDAATVEAIQAALVRHKVIFFRGQTHLDD---QSQEGFAKLLGEP 78 (301)
T ss_dssp CEEEESCCCCTTCCHHHHHHHHHHHHHHSEEEECCCTTCCH---HHHHHHHHTTSCB
T ss_pred ceEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCH---HHHHHHHHHhCCC
Confidence 3457778998744566789999999999999999987 875 4555567776544
No 25
>3ocr_A Class II aldolase/adducin domain protein; PSI-2, midwest center for structural genomics, protein struc initiative, MCSG, lyase; 1.95A {Pseudomonas syringae PV}
Probab=46.16 E-value=11 Score=33.25 Aligned_cols=36 Identities=8% Similarity=0.113 Sum_probs=31.4
Q ss_pred CCceeeCCCCC-hHHHHHHHHHHhhhccEEEEEcCCC
Q 019717 39 EIPTIDLNDPD-QERLTGAIAEASQEWGIFQVINHGI 74 (337)
Q Consensus 39 ~iPvIDls~l~-~~~~~~~l~~A~~~~GFf~l~nhgi 74 (337)
.||++|+..+. ..++.+.+.+++.+.-.+.|.|||+
T Consensus 156 ~v~~~~y~~~~~~~el~~~i~~~l~~~~avlL~nHG~ 192 (273)
T 3ocr_A 156 RVAYHGYEGIALDLSERERLVADLGDKSVMILRNHGL 192 (273)
T ss_dssp TEEEECCCCSSCCHHHHHHHHHHHTTCSEEEETTTEE
T ss_pred CEEEECCCCCCCCHHHHHHHHHHhCcCCEEEEcCCce
Confidence 58999998765 6778889999999999999999996
No 26
>2irp_A Putative aldolase class 2 protein AQ_1979; aldehyde, enzymatic mechanism; 2.40A {Aquifex aeolicus}
Probab=43.53 E-value=12 Score=31.48 Aligned_cols=50 Identities=12% Similarity=0.092 Sum_probs=34.4
Q ss_pred CCCceeeCCCCChHHHHHHHHHHhhhcc---EEEEEcCCCC--HHHHHHHHHHHhh
Q 019717 38 SEIPTIDLNDPDQERLTGAIAEASQEWG---IFQVINHGIP--SELINKLQGVGRE 88 (337)
Q Consensus 38 ~~iPvIDls~l~~~~~~~~l~~A~~~~G---Ff~l~nhgi~--~~~~~~~~~~~~~ 88 (337)
..||++++. ...+++++.+.+++.+.+ .+.|.|||+= -+.+++++..+..
T Consensus 138 ~~vp~~~~~-~g~~~La~~i~~~l~~~~~~~avll~nHG~~~~G~~~~eA~~~~~~ 192 (208)
T 2irp_A 138 IKIPIFPNE-QNIPLLAKEVENYFKTSEDKYGFLIRGHGLYTWGRSMEEALIHTEA 192 (208)
T ss_dssp CEEEEECCC-SCHHHHHHHHHHHHHHCSCCSCEEETTTEEEEEESSHHHHHHHHHH
T ss_pred cceeeecCC-CCHHHHHHHHHHHHhcCCCceEEEEcCCCCeEecCCHHHHHHHHHH
Confidence 368999885 556678888999998865 7889999962 1224444444433
No 27
>1m5a_B Insulin B chain; alpha helices, beta sheets, 3(10) helices, disulphide bridge hormone-growth factor complex; 1.20A {Sus scrofa} SCOP: g.1.1.1 PDB: 1aph_B 1b18_B 1b19_B 1b2a_B 1b2b_B 1b2c_B 1b2d_B 1b2e_B 1b2f_B 1b2g_B 1bph_B 1cph_B 1dph_B 1b17_B 1mpj_B 1wav_B 1zni_B 2a3g_B 2bn1_B 2bn3_B ...
Probab=41.58 E-value=29 Score=19.62 Aligned_cols=20 Identities=25% Similarity=0.290 Sum_probs=16.8
Q ss_pred hHHHHHHHHHHhhhccEEEE
Q 019717 50 QERLTGAIAEASQEWGIFQV 69 (337)
Q Consensus 50 ~~~~~~~l~~A~~~~GFf~l 69 (337)
..++++.|.-.|.+-||||-
T Consensus 8 Gs~LVdaL~~vCgdRGF~~~ 27 (30)
T 1m5a_B 8 GSHLVEALYLVCGERGFFYT 27 (30)
T ss_dssp THHHHHHHHHHHGGGCEEEC
T ss_pred HHHHHHHHHHHhccCccccC
Confidence 35678889999999999983
No 28
>3pvj_A Alpha-ketoglutarate-dependent taurine dioxygenase; jelly roll motif, Fe(II) binding, oxidoreductas; 1.85A {Pseudomonas putida KT2440} SCOP: b.82.2.5 PDB: 3v15_A 3v17_A*
Probab=40.70 E-value=20 Score=31.50 Aligned_cols=52 Identities=17% Similarity=0.230 Sum_probs=40.0
Q ss_pred CCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhcCC
Q 019717 38 SEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFFEL 92 (337)
Q Consensus 38 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF~l 92 (337)
++|.=|||+..-.++..++|.+|+.++|++.+.|..++.+ +..+.++.|=.+
T Consensus 14 aei~gvdl~~~l~~~~~~~l~~~l~~~gvv~fR~q~l~~~---~~~~fa~~fG~l 65 (277)
T 3pvj_A 14 AQISGVDISRDISAEERDAIEQALLQHQVLFLRDQPINPE---QQARFAARFGDL 65 (277)
T ss_dssp EEEESCCTTSCCCHHHHHHHHHHHHHHSEEEESSCCCCHH---HHHHHHGGGSCE
T ss_pred EEEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhCCC
Confidence 4577789987436677899999999999999999988764 445567776543
No 29
>3r1j_A Alpha-ketoglutarate-dependent taurine dioxygenase; ssgcid, oxidoreductase, structural genomics; 2.05A {Mycobacterium avium} SCOP: b.82.2.0 PDB: 3swt_A
Probab=37.39 E-value=30 Score=30.84 Aligned_cols=53 Identities=8% Similarity=0.015 Sum_probs=39.9
Q ss_pred CCCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcC-CCCHHHHHHHHHHHhhhcCC
Q 019717 37 VSEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINH-GIPSELINKLQGVGREFFEL 92 (337)
Q Consensus 37 ~~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nh-gi~~~~~~~~~~~~~~fF~l 92 (337)
.++|+=|||+..-.++..++|.+|+.++|.+.+.|. .++.+ +..+.++.|=.+
T Consensus 19 Gaei~gvdl~~~L~d~~~~~l~~al~~~gvv~fR~q~~l~~~---~~~~fa~~fG~l 72 (301)
T 3r1j_A 19 GARVDGVRLGGDLDDATVEQIRRALLTHKVIFFRHQHHLDDS---RQLEFARLLGTP 72 (301)
T ss_dssp CEEEESCCCSTTCCHHHHHHHHHHHHHHSEEEECCCTTCCHH---HHHHHHHHHSCB
T ss_pred cceEeCCCccccCCHHHHHHHHHHHHHCCEEEECCCCCCCHH---HHHHHHHhcCCc
Confidence 346777899853366778999999999999999998 78765 444567776544
No 30
>4ay7_A Methylcobalamin\: coenzyme M methyltransferase; TIM barrel; 1.80A {Methanosarcina mazei} PDB: 4ay8_A
Probab=36.95 E-value=58 Score=29.36 Aligned_cols=42 Identities=19% Similarity=0.193 Sum_probs=34.0
Q ss_pred hHHHHHHHHHHhhhccEEEEEcCCCC----HHHHHHHHHHHhhhcC
Q 019717 50 QERLTGAIAEASQEWGIFQVINHGIP----SELINKLQGVGREFFE 91 (337)
Q Consensus 50 ~~~~~~~l~~A~~~~GFf~l~nhgi~----~~~~~~~~~~~~~fF~ 91 (337)
.+++.+++.+.++.-||..=.+|||+ .+-++.+.+++++|++
T Consensus 303 ~e~i~~~v~~~l~~~g~I~~~Ghgi~p~tp~env~a~v~av~ey~A 348 (348)
T 4ay7_A 303 VDKIKAEAKEALEGGIDVLAPGCGIAPMTPLENVKALVAARDEFYA 348 (348)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSSCCTTCCHHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHhCCCCEEeCCCccCCCCCHHHHHHHHHHHHHhcC
Confidence 45666778888888888777789875 5789999999999975
No 31
>3m4r_A Uncharacterized protein; short chain dehydrogenase, class II aldolase, adducin head D carbohydrate metabolism, structural genomics; 2.00A {Thermoplasma acidophilum}
Probab=30.66 E-value=22 Score=30.25 Aligned_cols=34 Identities=12% Similarity=0.185 Sum_probs=28.2
Q ss_pred CceeeCCCCChHHHHHHHHHHhhhc-cEEEEEcCCC
Q 019717 40 IPTIDLNDPDQERLTGAIAEASQEW-GIFQVINHGI 74 (337)
Q Consensus 40 iPvIDls~l~~~~~~~~l~~A~~~~-GFf~l~nhgi 74 (337)
||++++..... ++++++.+++.+. -.+.|.|||+
T Consensus 156 v~~~~y~~~g~-ela~~i~~~l~~~~~avlL~nHG~ 190 (222)
T 3m4r_A 156 VVVLPYIPPGF-TLAKEVMNCFKKGIDGIVLRKHGL 190 (222)
T ss_dssp EEEECCCCSSH-HHHHHHHHHCCTTCSEEEETTTEE
T ss_pred ceecCCcCCcH-HHHHHHHHHHhcCCCEEEECCCCC
Confidence 89999887765 7888999999864 6788999996
No 32
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=30.09 E-value=25 Score=26.82 Aligned_cols=44 Identities=9% Similarity=0.027 Sum_probs=29.1
Q ss_pred CceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCCCHH-HHHHHH
Q 019717 40 IPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGIPSE-LINKLQ 83 (337)
Q Consensus 40 iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi~~~-~~~~~~ 83 (337)
.-|||++.+........|.+.|+++|+..+--.|.+.+ ..+.+.
T Consensus 49 PVVlDl~~l~~~~dl~~L~~~l~~~gl~~vGV~g~~~~~~~~~a~ 93 (120)
T 3ghf_A 49 PVVINVSGLESPVNWPELHKIVTSTGLRIIGVSGCKDASLKVEID 93 (120)
T ss_dssp EEEEEEEECCSSCCHHHHHHHHHTTTCEEEEEESCCCHHHHHHHH
T ss_pred cEEEEccccCChHHHHHHHHHHHHcCCEEEEEeCCCcHHHHHHHH
Confidence 33679987753233678999999999999855554433 444333
No 33
>3pnt_A NAD+-glycohydrolase; glycohydrolase, NAD+, virulence factor, hydrolase-hydrolase complex; 2.80A {Streptococcus pyogenes}
Probab=29.18 E-value=43 Score=28.12 Aligned_cols=35 Identities=20% Similarity=0.372 Sum_probs=26.5
Q ss_pred CCCCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCC
Q 019717 36 TVSEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGI 74 (337)
Q Consensus 36 ~~~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi 74 (337)
+..-.|.||...+..++ +..|.+.-|+|-|+|.-|
T Consensus 207 SELimPSId~kgls~~d----vLaaIe~kGYyEI~nPti 241 (268)
T 3pnt_A 207 SELIFPSISVKDLKSKA----VLAEIDAKGYFEIIDPTI 241 (268)
T ss_dssp CCEEECEEECTTCCHHH----HHHHHHHHSCCEEESCEE
T ss_pred cceeecccccCCCcHHH----HHHHHhhcCeEEecCCeE
Confidence 44558999999987554 445778889999998643
No 34
>2z7b_A MLR6791 protein; class II aldolase superfamily, lyase; 1.90A {Mesorhizobium loti}
Probab=26.47 E-value=36 Score=29.85 Aligned_cols=36 Identities=19% Similarity=0.398 Sum_probs=29.0
Q ss_pred CCceeeCCC---------CChHHHHHHHHHHhhhccEEEEEcCCC
Q 019717 39 EIPTIDLND---------PDQERLTGAIAEASQEWGIFQVINHGI 74 (337)
Q Consensus 39 ~iPvIDls~---------l~~~~~~~~l~~A~~~~GFf~l~nhgi 74 (337)
.||++++.. ...+++++.+.+++.+.-.+.|.|||+
T Consensus 157 ~vpv~~y~~~~g~~~~~~~~s~ela~~ia~~l~~~~avLL~nHG~ 201 (270)
T 2z7b_A 157 SVPVYEIRDKHGDETDLFGGSPDVCADIAESLGSQTVVLMARHGV 201 (270)
T ss_dssp CCCEECTHHHHCSCSCCCCCSHHHHHHHHHHHTTSSEEEETTTEE
T ss_pred CCceecccccCCcccccccCCHHHHHHHHHHhccCCEEEEcCCce
Confidence 699999641 125688889999999988899999996
No 35
>1e5r_A Proline oxidase; oxidoreductase, oxygenase, 2-oxoglutarate dependent oxygenase; 2.30A {Streptomyces SP} SCOP: b.82.2.4 PDB: 1e5s_A
Probab=26.16 E-value=55 Score=29.08 Aligned_cols=63 Identities=22% Similarity=0.270 Sum_probs=38.2
Q ss_pred cccCCCCC--------CceeEEee-CCCCceeEEeCCceEeeccCCCe-EEEEecchhhhhhCCcccCccccccCCCCCC
Q 019717 214 GLVPHTDL--------SSITILVP-NDVPGLLAFKGDRSIDVNYIPNA-LIVTIGDQIEILSNGKYKAVLHKATPHKEKT 283 (337)
Q Consensus 214 g~~~HtD~--------g~lTlL~q-d~~~GLqV~~~g~W~~V~p~pg~-~vVnvGd~l~~~TnG~~ks~~HRVv~~~~~~ 283 (337)
.+.+|.|. +.+-+... ...+|.....+|+-+..++ |. ..+|. +..|+|.+.+..+
T Consensus 103 ~I~~HrD~~~l~~~~~~~~RlHIPL~Tnp~~~f~vdg~~~~m~~--GE~w~~d~-------------~~~H~v~N~g~~~ 167 (290)
T 1e5r_A 103 IVIPHRDFVELDREVDRYFRTFMVLEDSPLAFHSNEDTVIHMRP--GEIWFLDA-------------ATVHSAVNFSEIS 167 (290)
T ss_dssp EEEEECCC--------CBCCEEEECSCCTTEEEEETTEEECCCT--TEEEECCT-------------TSCEEEEESSSSC
T ss_pred EeeCccCccccccccCCceEEEeeEecCCCcEEEECCEEEecCC--CCEEEEcC-------------CCeeEEEcCCCCC
Confidence 37888888 22333322 1246666666665444433 43 33332 3579999999999
Q ss_pred eeEEEEee
Q 019717 284 RISWPVFL 291 (337)
Q Consensus 284 R~Si~~F~ 291 (337)
|+.+++=+
T Consensus 168 RIhLv~D~ 175 (290)
T 1e5r_A 168 RQSLCVDF 175 (290)
T ss_dssp CCEEEEEE
T ss_pred eEEEEEEe
Confidence 99998765
No 36
>1nx8_A CARC, carbapenem synthase; jelly roll, unknown function; HET: AKG N7P; 2.30A {Pectobacterium carotovorum} SCOP: b.82.2.8 PDB: 1nx4_A*
Probab=25.05 E-value=19 Score=31.26 Aligned_cols=46 Identities=20% Similarity=0.202 Sum_probs=34.4
Q ss_pred CCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhc
Q 019717 38 SEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFF 90 (337)
Q Consensus 38 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 90 (337)
++|+-||++.+ + .++|.+++.++|++.+.+..++.+ ...+.++.|-
T Consensus 17 a~i~g~dl~~~-~---~~~l~~~l~~~G~v~~rg~~~~~~---~~~~~~~~~G 62 (273)
T 1nx8_A 17 AYIDHRDFLEA-K---TETIKNLLMRQGFVVVKNLDIDSD---TFRDIYSAYG 62 (273)
T ss_dssp EEECHHHHHHS-C---HHHHHHHHHHHCEEEECSCCCCHH---HHHHHHHTTS
T ss_pred EEEECCCcccC-C---HHHHHHHHHHCCEEEECCCCCCHH---HHHHHHHHhC
Confidence 34666788776 3 789999999999999999888754 4445566654
No 37
>2x4k_A 4-oxalocrotonate tautomerase; isomerase; 1.10A {Staphylococcus aureus}
Probab=24.60 E-value=59 Score=20.53 Aligned_cols=24 Identities=13% Similarity=0.268 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHHHHhhcCCChhh
Q 019717 161 NCMRGVVNKLFRCLSLGLGVEGHA 184 (337)
Q Consensus 161 ~~~~~l~~~ll~~l~~~Lgl~~~~ 184 (337)
+.-.+|+..|.+++++.||.|++.
T Consensus 17 e~k~~l~~~l~~~l~~~lg~p~~~ 40 (63)
T 2x4k_A 17 EQLKNLVSEVTDAVEKTTGANRQA 40 (63)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCGGG
T ss_pred HHHHHHHHHHHHHHHHHhCcCccc
Confidence 345688999999999999999864
No 38
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=24.47 E-value=59 Score=27.77 Aligned_cols=43 Identities=14% Similarity=0.257 Sum_probs=26.8
Q ss_pred ceeeCCCCChHHHHHHHHHHhhhccEEEEEc-CCCCHHHHHHHHHHH
Q 019717 41 PTIDLNDPDQERLTGAIAEASQEWGIFQVIN-HGIPSELINKLQGVG 86 (337)
Q Consensus 41 PvIDls~l~~~~~~~~l~~A~~~~GFf~l~n-hgi~~~~~~~~~~~~ 86 (337)
-+|||+.. +.+....+.|.+.|.=.|++ .|.+++..+.+.+++
T Consensus 56 VvIDFT~P---~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a 99 (228)
T 1vm6_A 56 VVIDFSSP---EALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELS 99 (228)
T ss_dssp EEEECSCG---GGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHT
T ss_pred EEEECCCH---HHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHH
Confidence 58999853 44555666677777766665 366666555554443
No 39
>2da7_A Zinc finger homeobox protein 1B; homeobox domain, three helices with the DNA binding helix- turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=23.47 E-value=31 Score=23.78 Aligned_cols=41 Identities=15% Similarity=0.071 Sum_probs=34.2
Q ss_pred CchHHHHHHHHHHHHHHHHHHHHHHHhhcCCChhhhHhhhc
Q 019717 150 PSYREVNEEYANCMRGVVNKLFRCLSLGLGVEGHALKEAVG 190 (337)
Q Consensus 150 ~~fr~~~~~y~~~~~~l~~~ll~~l~~~Lgl~~~~~~~~~~ 190 (337)
.+-+..++.||..-.+-...-+..||..+||+.+.....|.
T Consensus 14 k~ql~~Lk~yF~~n~~Ps~eei~~LA~~lgL~~~VVrVWFq 54 (71)
T 2da7_A 14 KDHMSVLKAYYAMNMEPNSDELLKISIAVGLPQEFVKEWFE 54 (71)
T ss_dssp THHHHHHHHHHHHCSSCCHHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCCHHHHHHHHHHhCCCHHHHHHHHh
Confidence 45688899999988888888899999999999987665553
No 40
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=21.25 E-value=96 Score=27.08 Aligned_cols=43 Identities=21% Similarity=0.193 Sum_probs=27.0
Q ss_pred eeeCCCCChHHHHHHHHHHhhhccEEEEE-cCCCCHHHHHHHHHHHh
Q 019717 42 TIDLNDPDQERLTGAIAEASQEWGIFQVI-NHGIPSELINKLQGVGR 87 (337)
Q Consensus 42 vIDls~l~~~~~~~~l~~A~~~~GFf~l~-nhgi~~~~~~~~~~~~~ 87 (337)
+||++. ++....+...|.+.|.=.|+ ..|.+++..+++.++++
T Consensus 77 VIDfT~---p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~ 120 (272)
T 4f3y_A 77 LIDFTL---PEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGE 120 (272)
T ss_dssp EEECSC---HHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTT
T ss_pred EEEcCC---HHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhc
Confidence 678873 44455566666677766655 45677666666666654
No 41
>3ijp_A DHPR, dihydrodipicolinate reductase; ssgcid, SBRI, decode biostructures, niaid, amino-acid biosynthesis, cytoplasm; HET: NAP; 2.30A {Bartonella henselae}
Probab=21.23 E-value=1e+02 Score=27.19 Aligned_cols=43 Identities=9% Similarity=0.229 Sum_probs=26.8
Q ss_pred eeeCCCCChHHHHHHHHHHhhhccEEEEEc-CCCCHHHHHHHHHHHh
Q 019717 42 TIDLNDPDQERLTGAIAEASQEWGIFQVIN-HGIPSELINKLQGVGR 87 (337)
Q Consensus 42 vIDls~l~~~~~~~~l~~A~~~~GFf~l~n-hgi~~~~~~~~~~~~~ 87 (337)
+||++. ++........|.+.|.=.|+. .|.+++..+++.++++
T Consensus 92 vIDFT~---p~a~~~~~~~~l~~Gv~vViGTTG~~~e~~~~L~~aa~ 135 (288)
T 3ijp_A 92 ILDFSQ---PQASVLYANYAAQKSLIHIIGTTGFSKTEEAQIADFAK 135 (288)
T ss_dssp EEECSC---HHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHHT
T ss_pred EEEcCC---HHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhC
Confidence 678874 444555566666777666653 4666666666666554
No 42
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=21.05 E-value=1.2e+02 Score=25.85 Aligned_cols=40 Identities=20% Similarity=0.267 Sum_probs=25.2
Q ss_pred HHHHHHHHHHhhhccEEEEEcCCCCHHHHHHHHHHHhhhc
Q 019717 51 ERLTGAIAEASQEWGIFQVINHGIPSELINKLQGVGREFF 90 (337)
Q Consensus 51 ~~~~~~l~~A~~~~GFf~l~nhgi~~~~~~~~~~~~~~fF 90 (337)
++..++|.++|++.+.|+--|-.+.--++.++.+.+.++|
T Consensus 88 ~e~~~~l~~aa~~~~v~~a~N~S~Gv~l~~~~~~~aa~~l 127 (243)
T 3qy9_A 88 EKLLNKLDELSQNMPVFFSANMSYGVHALTKILAAAVPLL 127 (243)
T ss_dssp HHHHHHHHHHTTTSEEEECSSCCHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhcCCEEEECCccHHHHHHHHHHHHHHHhc
Confidence 3445667777777777776676666666666655555544
No 43
>2ww6_A Fibritin, T4 fibritin; D-amino acids, chaperone, viral protein; HET: DPN PG4; 0.98A {Enterobacteria phage T4} PDB: 1rfo_A 1u0p_A 2kbl_A 2ww7_A*
Probab=20.35 E-value=73 Score=17.34 Aligned_cols=14 Identities=7% Similarity=-0.195 Sum_probs=10.7
Q ss_pred ceeEEeCCceEeec
Q 019717 234 GLLAFKGDRSIDVN 247 (337)
Q Consensus 234 GLqV~~~g~W~~V~ 247 (337)
-..|+.+|.|+...
T Consensus 11 ~~Yvr~dg~WV~l~ 24 (27)
T 2ww6_A 11 QAYVRKFGEWVLLS 24 (27)
T ss_dssp CEEEEETTEEEEGG
T ss_pred ceeEEEcCeEEEcc
Confidence 35678899999754
No 44
>3eat_X Pyoverdine biosynthesis protein PVCB; paerucumarin, Fe/alpha-ketoglutarate dependent hydroxylase, 2-isocyano-6,7-dihydroxycoumarin; 2.50A {Pseudomonas aeruginosa}
Probab=20.23 E-value=56 Score=28.77 Aligned_cols=52 Identities=10% Similarity=-0.012 Sum_probs=36.1
Q ss_pred CCCceeeCCCCChHHHHHHHHHHhhhccEEEEEcCC-C-CHHHHHHHHHHHhhhcCC
Q 019717 38 SEIPTIDLNDPDQERLTGAIAEASQEWGIFQVINHG-I-PSELINKLQGVGREFFEL 92 (337)
Q Consensus 38 ~~iPvIDls~l~~~~~~~~l~~A~~~~GFf~l~nhg-i-~~~~~~~~~~~~~~fF~l 92 (337)
++|.=||++..-.++..++|.+++.++|++.+.+.. + +.+ ...+.++.|-.+
T Consensus 29 aeI~gvdl~~~l~~~~~~~L~~~l~~~gvv~fRgq~~l~~~~---~~~~~a~~fG~l 82 (293)
T 3eat_X 29 LLLEPGRPGMHVGELPAQWLKGLARSHHLLLLRGFAAFADAE---SLTRYCHDFGEV 82 (293)
T ss_dssp EEEEESSTTCBGGGSCHHHHHHHHHHHSEEEECSCBCCSSHH---HHHHHHHHHSCB
T ss_pred eEEECCCCCcCcCHHHHHHHHHHHHHhCEEEECCCCCCCCHH---HHHHHHHHhCCC
Confidence 345667887532445678899999999999999876 5 543 445556666543
Done!