BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 019720
(336 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|296089966|emb|CBI39785.3| unnamed protein product [Vitis vinifera]
Length = 343
Score = 557 bits (1436), Expect = e-156, Method: Compositional matrix adjust.
Identities = 268/344 (77%), Positives = 304/344 (88%), Gaps = 9/344 (2%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMA---RNRPAARAGAPSFLIRTAMRISRA 57
MNTRY FP DSLCNS +V +SS PA EDRMA RNR ++RA SFLIRTAMRISRA
Sbjct: 1 MNTRYFFPPDSLCNSGISVSFSSLSPAGEDRMAAGVRNR-SSRAPPSSFLIRTAMRISRA 59
Query: 58 RWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWP 117
RWF+FLRRVFHYQNGSRSDLG+NPFNSSTWM LE +AL+VQI +ITFTLS+SK E P+WP
Sbjct: 60 RWFSFLRRVFHYQNGSRSDLGANPFNSSTWMILEFIALVVQIGVITFTLSVSKAERPVWP 119
Query: 118 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS 177
MRIWIVGYD GC+LSLLLLY RY++ Y++Q DGFSLPD+EQQR++E+SR SHLMNKCRTS
Sbjct: 120 MRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTS 179
Query: 178 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 237
LELFFAIWFVMGNVWVFDSRFGSF RAP LHVLCI+LLAWNA+SYSFPFLLF+LLCCCVP
Sbjct: 180 LELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVP 239
Query: 238 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-----EDPECCI 292
L+S++LGYNMNMG+ DKGASDDQISRLPSWR+K ++NL+ N A +N E PECCI
Sbjct: 240 LVSNLLGYNMNMGSVDKGASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCI 299
Query: 293 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
CLAKY+EKEEVR+LPCSHMFHLKCVDQWLRI+SCCPLCKQE+ER
Sbjct: 300 CLAKYREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQEIER 343
>gi|147819085|emb|CAN74282.1| hypothetical protein VITISV_016708 [Vitis vinifera]
Length = 343
Score = 556 bits (1433), Expect = e-156, Method: Compositional matrix adjust.
Identities = 267/344 (77%), Positives = 304/344 (88%), Gaps = 9/344 (2%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMA---RNRPAARAGAPSFLIRTAMRISRA 57
MNTRY FP DSLCNS +V +SS PA EDRMA RNR ++RA SFLIRTAMRISRA
Sbjct: 1 MNTRYFFPPDSLCNSGISVSFSSLSPAGEDRMAAGVRNR-SSRAPPSSFLIRTAMRISRA 59
Query: 58 RWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWP 117
RWF+FLRRVFHYQNGSRSDLG+NPFNS+TWM LE +AL+VQI +ITFTLS+SK E P+WP
Sbjct: 60 RWFSFLRRVFHYQNGSRSDLGANPFNSNTWMILEFIALVVQIGVITFTLSVSKAERPVWP 119
Query: 118 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS 177
MRIWIVGYD GC+LSLLLLY RY++ Y++Q DGFSLPD+EQQR++E+SR SHLMNKCRTS
Sbjct: 120 MRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFSLPDIEQQRNNEESRSSHLMNKCRTS 179
Query: 178 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 237
LELFFAIWFVMGNVWVFDSRFGSF RAP LHVLCI+LLAWNA+SYSFPFLLF+LLCCCVP
Sbjct: 180 LELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCITLLAWNAISYSFPFLLFVLLCCCVP 239
Query: 238 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-----EDPECCI 292
L+S++LGYNMNMG+ DKGASDDQISRLPSWR+K ++NL+ N A +N E PECCI
Sbjct: 240 LVSNLLGYNMNMGSVDKGASDDQISRLPSWRFKEANANLDLPNGADSNSPLSSEYPECCI 299
Query: 293 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
CLAKY+EKEEVR+LPCSHMFHLKCVDQWLRI+SCCPLCKQE+ER
Sbjct: 300 CLAKYREKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQEIER 343
>gi|359494331|ref|XP_002267586.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680 [Vitis vinifera]
Length = 312
Score = 518 bits (1335), Expect = e-144, Method: Compositional matrix adjust.
Identities = 245/309 (79%), Positives = 279/309 (90%), Gaps = 6/309 (1%)
Query: 33 ARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLEL 92
RNR ++RA SFLIRTAMRISRARWF+FLRRVFHYQNGSRSDLG+NPFNSSTWM LE
Sbjct: 5 VRNR-SSRAPPSSFLIRTAMRISRARWFSFLRRVFHYQNGSRSDLGANPFNSSTWMILEF 63
Query: 93 LALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFS 152
+AL+VQI +ITFTLS+SK E P+WPMRIWIVGYD GC+LSLLLLY RY++ Y++Q DGFS
Sbjct: 64 IALVVQIGVITFTLSVSKAERPVWPMRIWIVGYDFGCVLSLLLLYWRYQRPYSAQGDGFS 123
Query: 153 LPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCI 212
LPD+EQQR++E+SR SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF RAP LHVLCI
Sbjct: 124 LPDIEQQRNNEESRSSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFHRAPKLHVLCI 183
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV 272
+LLAWNA+SYSFPFLLF+LLCCCVPL+S++LGYNMNMG+ DKGASDDQISRLPSWR+K
Sbjct: 184 TLLAWNAISYSFPFLLFVLLCCCVPLVSNLLGYNMNMGSVDKGASDDQISRLPSWRFKEA 243
Query: 273 DSNLEAGNSAPAN-----EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
++NL+ N A +N E PECCICLAKY+EKEEVR+LPCSHMFHLKCVDQWLRI+SCC
Sbjct: 244 NANLDLPNGADSNSPLSSEYPECCICLAKYREKEEVRQLPCSHMFHLKCVDQWLRIISCC 303
Query: 328 PLCKQELER 336
PLCKQE+ER
Sbjct: 304 PLCKQEIER 312
>gi|224056493|ref|XP_002298883.1| predicted protein [Populus trichocarpa]
gi|222846141|gb|EEE83688.1| predicted protein [Populus trichocarpa]
Length = 341
Score = 483 bits (1242), Expect = e-134, Method: Compositional matrix adjust.
Identities = 260/347 (74%), Positives = 289/347 (83%), Gaps = 17/347 (4%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMA---RNRPAARAGAPSFLIRTAMRISRA 57
MNTRY FP +S C SS P +S PA E+ RNR +AR S L+RTAMRISRA
Sbjct: 1 MNTRYPFPMNSFCGSS---PVAS--PAGEEHGTVSLRNR-SARTPTSSLLVRTAMRISRA 54
Query: 58 RWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWP 117
RWF FLRRVFHYQNGSRS+LGSNPFNSS WM LE +AL++QISI FTL+ISK E P+WP
Sbjct: 55 RWFTFLRRVFHYQNGSRSNLGSNPFNSSPWMMLEFVALVIQISITMFTLAISKAEKPVWP 114
Query: 118 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDS---RFSHLMNKC 174
+RIWI+GY+IGC+LSLLLLYGRYRQ+ +Q DGF LPD+EQQR SE+S R S LM+KC
Sbjct: 115 VRIWIIGYNIGCVLSLLLLYGRYRQINTTQADGFGLPDLEQQRGSEESSVCRCSILMHKC 174
Query: 175 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 234
RTSLELFFAIWFVMGNVWVFDSRFGS+ RAP LHVLCISLLAWNALSYSFPFLLFLLLCC
Sbjct: 175 RTSLELFFAIWFVMGNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFLLLCC 234
Query: 235 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-----EDPE 289
CVPLIS+VLGYNMNMG+A++GASDDQIS LPSWRYK D+N E N+A N ED E
Sbjct: 235 CVPLISTVLGYNMNMGSAERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIASEDLE 294
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
CCICLAKYK+KEEVRKLPCSHMFHLKCVDQWLRI+SCCPLCKQ LER
Sbjct: 295 CCICLAKYKDKEEVRKLPCSHMFHLKCVDQWLRIISCCPLCKQGLER 341
>gi|255563598|ref|XP_002522801.1| ring finger protein, putative [Ricinus communis]
gi|223538039|gb|EEF39652.1| ring finger protein, putative [Ricinus communis]
Length = 323
Score = 472 bits (1215), Expect = e-131, Method: Compositional matrix adjust.
Identities = 253/341 (74%), Positives = 276/341 (80%), Gaps = 23/341 (6%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWF 60
MNTRY DS CNS T V +SS+ E+R G S R+ +
Sbjct: 1 MNTRYFSTPDSFCNSGTAVSFSSNSAVGENR----------GPVSIRTRSXVP------- 43
Query: 61 NFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRI 120
FLRRVFHYQNGSRS+LGSNPFNSSTWM LE +ALLVQIS+ TFTL ISK E PIWPMRI
Sbjct: 44 -FLRRVFHYQNGSRSNLGSNPFNSSTWMMLEFIALLVQISMTTFTLVISKMEKPIWPMRI 102
Query: 121 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLEL 180
WIVGYDIGCLLSLLL+YGRYRQ++ Q D F L D+EQQR SEDSR +HLMNKCRTSLEL
Sbjct: 103 WIVGYDIGCLLSLLLVYGRYRQVHVVQGDSFGLSDLEQQRGSEDSRCTHLMNKCRTSLEL 162
Query: 181 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 240
FFAIWFVMGNVWVFDSRFGSF RAP LHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS
Sbjct: 163 FFAIWFVMGNVWVFDSRFGSFNRAPKLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS 222
Query: 241 SVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGN-----SAPANEDPECCICLA 295
SVLGYNM MG+A++GASDDQISRLPSW+YK VD+N E + S AN+DPECCICLA
Sbjct: 223 SVLGYNMQMGSAERGASDDQISRLPSWKYKAVDTNSEVASNIDCTSTLANDDPECCICLA 282
Query: 296 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
KYK+KEEVR+LPCSHMFHLKCVDQWLRI+SCCPLCKQELER
Sbjct: 283 KYKDKEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQELER 323
>gi|297793071|ref|XP_002864420.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297310255|gb|EFH40679.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 343
Score = 463 bits (1192), Expect = e-128, Method: Compositional matrix adjust.
Identities = 237/343 (69%), Positives = 277/343 (80%), Gaps = 7/343 (2%)
Query: 1 MNTRYSFPSD----SLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISR 56
MNTRYS + ++ + ++ SS P E+ A + A SF IR AM++SR
Sbjct: 1 MNTRYSVQPELSSNNISITISSSASLSSSPRGENSHAADGNAQERSPSSFYIRLAMKVSR 60
Query: 57 ARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIW 116
ARWF FLRRVFHYQNGSRSDLGSNPFNSSTWM EL+ALLVQ+++ITFTL+ISK+E PIW
Sbjct: 61 ARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPIW 120
Query: 117 PMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQ-RSSEDSRFSHLMNKCR 175
P+R+WI GYD+GCLL+L+LLYGRYRQL Q +GF L DVEQQ R E++R SHLMNKCR
Sbjct: 121 PVRLWITGYDVGCLLNLMLLYGRYRQLDVYQGNGFVLGDVEQQQRGREETRSSHLMNKCR 180
Query: 176 TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCC 235
TSLELFFAIWFV+GNVWVFDSRFGSF AP LHVLC+SLL+WNA+ YSFPFLLFL LCC
Sbjct: 181 TSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLSWNAICYSFPFLLFLFLCCL 240
Query: 236 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL--EAGNSAPANEDPECCIC 293
VPLISS+LGYNMNMG++D+ ASDDQIS LPSW++KR+D N +SA A +DPECCIC
Sbjct: 241 VPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDENASDSDSDSATATDDPECCIC 300
Query: 294 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
LAKYK+KEEVRKLPC H FH KCVDQWLRI+SCCPLCKQ+L R
Sbjct: 301 LAKYKDKEEVRKLPCQHKFHSKCVDQWLRIISCCPLCKQDLPR 343
>gi|255635776|gb|ACU18237.1| unknown [Glycine max]
Length = 365
Score = 456 bits (1173), Expect = e-126, Method: Compositional matrix adjust.
Identities = 217/295 (73%), Positives = 254/295 (86%), Gaps = 9/295 (3%)
Query: 17 TTVPYSSSPPATEDRMA--RNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSR 74
+ VP+SS+ ATEDR+A RNRP R PSFL+R AMRISRARWF FLRRVFHYQNGSR
Sbjct: 15 SMVPFSSNS-ATEDRVASARNRPP-RVTPPSFLVRIAMRISRARWFTFLRRVFHYQNGSR 72
Query: 75 SDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLL 134
S+LGSNPFNSSTWM LE +AL++QI+I TFTL+ISK+E PIWPMRIW+ GYDIGC+L+LL
Sbjct: 73 SNLGSNPFNSSTWMMLEFIALILQITITTFTLAISKRERPIWPMRIWVSGYDIGCVLNLL 132
Query: 135 LLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVF 194
LLYGRYRQ+Y +Q D SL D+EQQR++E++R SHLMNKCRTSLELFFAIWFVMGNVWVF
Sbjct: 133 LLYGRYRQIYLTQGDSLSLSDIEQQRNNEETRMSHLMNKCRTSLELFFAIWFVMGNVWVF 192
Query: 195 DSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADK 254
DSRFGSF AP LHVLCI LLAWNA+ YSFPFLLF+LLCCCVPLIS++LGYNMNM +++K
Sbjct: 193 DSRFGSFHHAPKLHVLCIILLAWNAMCYSFPFLLFVLLCCCVPLISTLLGYNMNMASSNK 252
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPA-----NEDPECCICLAKYKEKEEVR 304
GAS+DQIS+LPSWR+K + LE GN++ NEDPECCICLAKYK++EEVR
Sbjct: 253 GASNDQISQLPSWRHKEAGAKLELGNASEGSEKLINEDPECCICLAKYKDEEEVR 307
>gi|18423810|ref|NP_568834.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|30696669|ref|NP_851197.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|21553392|gb|AAM62485.1| unknown [Arabidopsis thaliana]
gi|332009321|gb|AED96704.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332009322|gb|AED96705.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 343
Score = 454 bits (1168), Expect = e-125, Method: Compositional matrix adjust.
Identities = 239/344 (69%), Positives = 278/344 (80%), Gaps = 9/344 (2%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAP-----SFLIRTAMRIS 55
MNTRYS + L +S+ T+ SSS + N A A SF IR AM++S
Sbjct: 1 MNTRYSNQPE-LSSSNITITISSSALLSSSPRGDNSHVAAANGQERSPSSFYIRLAMKVS 59
Query: 56 RARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPI 115
RARWF FLRRVFHYQNGSRSDLGSNPFNSSTWM EL+ALLVQ+++ITFTL+ISK+E PI
Sbjct: 60 RARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPI 119
Query: 116 WPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQ-RSSEDSRFSHLMNKC 174
WP+R+WI GYD+GCLL+L+LLYGRYRQL +Q +GF L DVEQQ R E++R SHLMNKC
Sbjct: 120 WPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRGREETRSSHLMNKC 179
Query: 175 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 234
RTSLELFFAIWFV+GNVWVFDSRFGSF AP LHVLC+SLLAWNA+ YSFPFLLFL LCC
Sbjct: 180 RTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCC 239
Query: 235 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV--DSNLEAGNSAPANEDPECCI 292
VPLISS+LGYNMNMG++D+ ASDDQIS LPSW++KR+ ++ +SA +DPECCI
Sbjct: 240 LVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRIDDSASDSDSDSATVTDDPECCI 299
Query: 293 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
CLAKYK+KEEVRKLPCSH FH KCVDQWLRI+SCCPLCKQ+L R
Sbjct: 300 CLAKYKDKEEVRKLPCSHKFHSKCVDQWLRIISCCPLCKQDLPR 343
>gi|4938496|emb|CAB43854.1| putative protein [Arabidopsis thaliana]
gi|7269510|emb|CAB79513.1| putative protein [Arabidopsis thaliana]
Length = 464
Score = 448 bits (1153), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/336 (69%), Positives = 271/336 (80%), Gaps = 5/336 (1%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWF 60
M+TRYS S +S TV SSS +T+ + + + SF +R AMR+SRARWF
Sbjct: 130 MSTRYSSQLQSSAINSITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWF 189
Query: 61 NFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRI 120
FLRRVFHYQN SRSDLG+NPFNS WM EL+ALL+QI++IT TL++SK E P+WPMR+
Sbjct: 190 IFLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRL 249
Query: 121 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSS--EDSRFSHLMNKCRTSL 178
WI GY++GCLL+L+LLYGRYRQ S + FS D+EQQ+ S E +R SHLMNKCRTSL
Sbjct: 250 WITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSL 309
Query: 179 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL 238
ELFFAIWFV+GNVWVFDSRFGSF AP LHVLCISLLAWNAL YSFPFLLFLLLCC VPL
Sbjct: 310 ELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPL 369
Query: 239 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 298
+SS LGYNMN+G+++KGASDDQIS LPSW+YK +D E +S+ AN DPECCICLAKYK
Sbjct: 370 VSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLID---ETSDSSQANNDPECCICLAKYK 426
Query: 299 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
EKEEVRKLPCSH FHLKCVDQWLRI+SCCPLCKQ+L
Sbjct: 427 EKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 462
>gi|224114523|ref|XP_002316784.1| predicted protein [Populus trichocarpa]
gi|222859849|gb|EEE97396.1| predicted protein [Populus trichocarpa]
Length = 293
Score = 446 bits (1148), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/293 (79%), Positives = 262/293 (89%), Gaps = 8/293 (2%)
Query: 52 MRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKK 111
MRISRARWF FLRRVFHYQNGS S+LGSNPFNSS+WM LE +ALL+QI I TFTL+ISK
Sbjct: 1 MRISRARWFTFLRRVFHYQNGSSSNLGSNPFNSSSWMMLEFVALLLQICITTFTLAISKA 60
Query: 112 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDS---RFS 168
E+P+WP+RIWI+GY+IGC+LSLLLLYGRYRQL A+Q DGF LPD+EQQ SE+S R+S
Sbjct: 61 ENPVWPVRIWIIGYNIGCVLSLLLLYGRYRQLNATQGDGFGLPDLEQQGGSEESSVCRYS 120
Query: 169 HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLL 228
HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS+ RAP LHVLCISLLAWNALSYSFPFLL
Sbjct: 121 HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSYFRAPKLHVLCISLLAWNALSYSFPFLL 180
Query: 229 FLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP----- 283
FLLLCCCVPLIS+V+GYNM+MG+A++GASDDQISRLPS RYK VD++ E NS
Sbjct: 181 FLLLCCCVPLISTVIGYNMSMGSAERGASDDQISRLPSRRYKAVDTDSEFRNSVDCDSTV 240
Query: 284 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
A+ED ECCICLAKYK+ EEVR+LPCSHMFHLKCVDQWLRI+SCCPLCKQELE+
Sbjct: 241 ASEDLECCICLAKYKDIEEVRQLPCSHMFHLKCVDQWLRIISCCPLCKQELEK 293
>gi|145345425|ref|NP_194388.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|334186942|ref|NP_001190848.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|110743905|dbj|BAE99787.1| hypothetical protein [Arabidopsis thaliana]
gi|332659822|gb|AEE85222.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332659823|gb|AEE85223.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 335
Score = 446 bits (1146), Expect = e-123, Method: Compositional matrix adjust.
Identities = 233/336 (69%), Positives = 271/336 (80%), Gaps = 5/336 (1%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWF 60
M+TRYS S +S TV SSS +T+ + + + SF +R AMR+SRARWF
Sbjct: 1 MSTRYSSQLQSSAINSITVSSSSSFASTQLDDNTHTAPESSPSSSFFMRLAMRVSRARWF 60
Query: 61 NFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRI 120
FLRRVFHYQN SRSDLG+NPFNS WM EL+ALL+QI++IT TL++SK E P+WPMR+
Sbjct: 61 IFLRRVFHYQNASRSDLGTNPFNSIAWMVSELIALLLQITVITSTLALSKNERPVWPMRL 120
Query: 121 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSS--EDSRFSHLMNKCRTSL 178
WI GY++GCLL+L+LLYGRYRQ S + FS D+EQQ+ S E +R SHLMNKCRTSL
Sbjct: 121 WITGYNVGCLLNLMLLYGRYRQQDTSHENAFSFGDIEQQQRSREETTRCSHLMNKCRTSL 180
Query: 179 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL 238
ELFFAIWFV+GNVWVFDSRFGSF AP LHVLCISLLAWNAL YSFPFLLFLLLCC VPL
Sbjct: 181 ELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPL 240
Query: 239 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 298
+SS LGYNMN+G+++KGASDDQIS LPSW+YK +D E +S+ AN DPECCICLAKYK
Sbjct: 241 VSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLID---ETSDSSQANNDPECCICLAKYK 297
Query: 299 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
EKEEVRKLPCSH FHLKCVDQWLRI+SCCPLCKQ+L
Sbjct: 298 EKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQDL 333
>gi|357495163|ref|XP_003617870.1| RING finger protein [Medicago truncatula]
gi|355519205|gb|AET00829.1| RING finger protein [Medicago truncatula]
Length = 337
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 235/336 (69%), Positives = 281/336 (83%), Gaps = 9/336 (2%)
Query: 9 SDSLCNSSTTVPYSSSPPATEDRM--ARNRPAARAGAPSFLIRTAMRISRARWFNFLRRV 66
S L NS++ V SS+ E+R+ +RNRP A +PSF +R AMRISR+RWF LRRV
Sbjct: 3 SRCLLNSNSIVQSSSNSETREERVVSSRNRPQ-HASSPSFSVRMAMRISRSRWFTLLRRV 61
Query: 67 FHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYD 126
FHYQNGSRS+LGSNPFNSSTW+ +E +AL++QI I TFTL ISK+E P+WPMRIWI GYD
Sbjct: 62 FHYQNGSRSNLGSNPFNSSTWLMMEFIALIIQIIISTFTLVISKREKPVWPMRIWISGYD 121
Query: 127 IGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWF 186
IGC+L+LL +YGRYRQ+Y Q D SL D+EQQR+S ++R SHLMNKCRTSLE FFAIWF
Sbjct: 122 IGCVLNLLTVYGRYRQIYLIQGDALSLSDIEQQRNSGETRMSHLMNKCRTSLEFFFAIWF 181
Query: 187 VMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYN 246
VMGNVWVFDSRFGSFQ+AP LHVLCI+LL WNA+ YSFPFLLFLLLCCCVPLIS++LGYN
Sbjct: 182 VMGNVWVFDSRFGSFQQAPKLHVLCITLLTWNAICYSFPFLLFLLLCCCVPLISTLLGYN 241
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVD-SNLEAGNSAPA-----NEDPECCICLAKYKEK 300
MN+ +++KGASD+QIS+LPSWR+K + LE GN + + NEDPECCICLAKYK+K
Sbjct: 242 MNIASSNKGASDEQISQLPSWRHKEPHATKLELGNDSESIEKFINEDPECCICLAKYKDK 301
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
EEVR+LPCSH+FHL+CVDQWL+I+SCCPLCKQ LER
Sbjct: 302 EEVRQLPCSHVFHLECVDQWLKIISCCPLCKQGLER 337
>gi|297799346|ref|XP_002867557.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297313393|gb|EFH43816.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 442 bits (1138), Expect = e-122, Method: Compositional matrix adjust.
Identities = 237/336 (70%), Positives = 275/336 (81%), Gaps = 5/336 (1%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWF 60
M+TR+S S +S TV SSS +T + + + SFL+R AMR+SRA WF
Sbjct: 1 MSTRFSSQLQSSAINSITVSSSSSLDSTSRDDNIHMAPESSPSSSFLMRLAMRVSRATWF 60
Query: 61 NFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRI 120
FLRRVFHYQN SRSDLG+NPFNS TWM EL+ALLVQI++IT TL++SKKE P+WPMR+
Sbjct: 61 IFLRRVFHYQNASRSDLGTNPFNSITWMISELIALLVQITVITSTLALSKKERPVWPMRL 120
Query: 121 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVE-QQRSSEDS-RFSHLMNKCRTSL 178
WI GY++GCLL+L+LLYGRYRQ + SQ + FS D+E QQRS E++ R SHLMN+CRTSL
Sbjct: 121 WITGYNVGCLLNLMLLYGRYRQQHTSQGNAFSFGDIELQQRSREETTRCSHLMNRCRTSL 180
Query: 179 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL 238
ELFFAIWFV+GNVWVFDSRFGSF AP LHVLCISLLAWNAL YSFPFLLFLLLCC VPL
Sbjct: 181 ELFFAIWFVIGNVWVFDSRFGSFHYAPILHVLCISLLAWNALCYSFPFLLFLLLCCVVPL 240
Query: 239 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 298
+SS LGYNMN+G+++KGASDDQIS LPSW+YK +D EA +SA A+ DPECCICLAKYK
Sbjct: 241 LSSFLGYNMNVGSSEKGASDDQISSLPSWKYKLID---EASDSAQASNDPECCICLAKYK 297
Query: 299 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
EKEEVRKLPCSH FHLKCVDQWLRI+SCCPLCKQ L
Sbjct: 298 EKEEVRKLPCSHRFHLKCVDQWLRIISCCPLCKQNL 333
>gi|357495165|ref|XP_003617871.1| RING finger protein [Medicago truncatula]
gi|355519206|gb|AET00830.1| RING finger protein [Medicago truncatula]
Length = 340
Score = 438 bits (1126), Expect = e-120, Method: Compositional matrix adjust.
Identities = 235/339 (69%), Positives = 281/339 (82%), Gaps = 12/339 (3%)
Query: 9 SDSLCNSSTTVPYSSSPPATEDRM--ARNRPAARAGAPSFLIRTAMRISRARWFNFLRRV 66
S L NS++ V SS+ E+R+ +RNRP A +PSF +R AMRISR+RWF LRRV
Sbjct: 3 SRCLLNSNSIVQSSSNSETREERVVSSRNRPQ-HASSPSFSVRMAMRISRSRWFTLLRRV 61
Query: 67 FHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYD 126
FHYQNGSRS+LGSNPFNSSTW+ +E +AL++QI I TFTL ISK+E P+WPMRIWI GYD
Sbjct: 62 FHYQNGSRSNLGSNPFNSSTWLMMEFIALIIQIIISTFTLVISKREKPVWPMRIWISGYD 121
Query: 127 IGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDS---RFSHLMNKCRTSLELFFA 183
IGC+L+LL +YGRYRQ+Y Q D SL D+EQQR+S ++ R SHLMNKCRTSLE FFA
Sbjct: 122 IGCVLNLLTVYGRYRQIYLIQGDALSLSDIEQQRNSGETSVYRMSHLMNKCRTSLEFFFA 181
Query: 184 IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVL 243
IWFVMGNVWVFDSRFGSFQ+AP LHVLCI+LL WNA+ YSFPFLLFLLLCCCVPLIS++L
Sbjct: 182 IWFVMGNVWVFDSRFGSFQQAPKLHVLCITLLTWNAICYSFPFLLFLLLCCCVPLISTLL 241
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKRVD-SNLEAGNSAPA-----NEDPECCICLAKY 297
GYNMN+ +++KGASD+QIS+LPSWR+K + LE GN + + NEDPECCICLAKY
Sbjct: 242 GYNMNIASSNKGASDEQISQLPSWRHKEPHATKLELGNDSESIEKFINEDPECCICLAKY 301
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
K+KEEVR+LPCSH+FHL+CVDQWL+I+SCCPLCKQ LER
Sbjct: 302 KDKEEVRQLPCSHVFHLECVDQWLKIISCCPLCKQGLER 340
>gi|449463372|ref|XP_004149408.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 315
Score = 435 bits (1119), Expect = e-119, Method: Compositional matrix adjust.
Identities = 210/307 (68%), Positives = 252/307 (82%), Gaps = 8/307 (2%)
Query: 38 AARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLV 97
A+ + PSF ++ AM+ISRARWF FLRRVFHYQNGSRSDLG NPFNS +WM +EL+ALL
Sbjct: 9 ASDSVPPSFWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLF 68
Query: 98 QISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVE 157
Q+ I FTL+IS+ E P+WPMR+WI GYD+GC+LSLLLLYGR+R Y Q DG SL D+E
Sbjct: 69 QLIISAFTLAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIE 128
Query: 158 --QQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLL 215
QQR++E SR+SHLMN+CRTSL+LFFAIWFVMGN+W FDSR SFQRAP LH+LC LL
Sbjct: 129 HEQQRTNESSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLL 188
Query: 216 AWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN 275
WNA+ YSFPF+LFLLLCCCVPLISS+ GYN+N G+ +KGASDDQIS+LP WRYK V++N
Sbjct: 189 VWNAICYSFPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEAN 248
Query: 276 ------LEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 329
L+ N+ EDPECCICLAKY +KEEVR+LPCSH+FHL+CVD+WL I S CPL
Sbjct: 249 INPRSQLDNSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPL 308
Query: 330 CKQELER 336
CKQ+L+R
Sbjct: 309 CKQQLQR 315
>gi|449496857|ref|XP_004160245.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like, partial [Cucumis
sativus]
Length = 299
Score = 430 bits (1105), Expect = e-118, Method: Compositional matrix adjust.
Identities = 207/299 (69%), Positives = 247/299 (82%), Gaps = 8/299 (2%)
Query: 46 FLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFT 105
F ++ AM+ISRARWF FLRRVFHYQNGSRSDLG NPFNS +WM +EL+ALL Q+ I FT
Sbjct: 1 FWVKMAMKISRARWFIFLRRVFHYQNGSRSDLGPNPFNSGSWMAMELVALLFQLIISAFT 60
Query: 106 LSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVE--QQRSSE 163
L+IS+ E P+WPMR+WI GYD+GC+LSLLLLYGR+R Y Q DG SL D+E QQR++E
Sbjct: 61 LAISQAEKPVWPMRLWIGGYDLGCVLSLLLLYGRHRYHYLMQRDGNSLSDIEHEQQRTNE 120
Query: 164 DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYS 223
SR+SHLMN+CRTSL+LFFAIWFVMGN+W FDSR SFQRAP LH+LC LL WNA+ YS
Sbjct: 121 SSRYSHLMNRCRTSLDLFFAIWFVMGNLWAFDSRLASFQRAPKLHLLCSFLLVWNAICYS 180
Query: 224 FPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN------LE 277
FPF+LFLLLCCCVPLISS+ GYN+N G+ +KGASDDQIS+LP WRYK V++N L+
Sbjct: 181 FPFILFLLLCCCVPLISSLTGYNINTGSTEKGASDDQISQLPCWRYKAVEANINPRSQLD 240
Query: 278 AGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
N+ EDPECCICLAKY +KEEVR+LPCSH+FHL+CVD+WL I S CPLCKQ+L+R
Sbjct: 241 NSNTGLLKEDPECCICLAKYIDKEEVRQLPCSHVFHLRCVDKWLAITSSCPLCKQQLQR 299
>gi|449463394|ref|XP_004149419.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 336
Score = 422 bits (1086), Expect = e-116, Method: Compositional matrix adjust.
Identities = 212/337 (62%), Positives = 257/337 (76%), Gaps = 5/337 (1%)
Query: 1 MNTRYSFPSDSLCN--SSTTVPYSSSPPATEDRMARNRPAARAGAP-SFLIRTAMRISRA 57
+N+ Y F S S CN T++ +S ++ + R P SF +R AMR+SRA
Sbjct: 2 INSVY-FVSGSSCNCGGGTSLFIPNSLLEEDEPVVDVRDDNSVALPASFWVRLAMRVSRA 60
Query: 58 RWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWP 117
RWF FLRRVFHYQNGSRS+LGS+PFNSS+WM +EL+A++ Q+SI F L+IS+ E PIWP
Sbjct: 61 RWFIFLRRVFHYQNGSRSNLGSDPFNSSSWMAVELVAMVFQLSITVFVLAISEAEKPIWP 120
Query: 118 MRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS 177
MR+WIVGYD+GC+LSLLLLYGRY LY + L D EQ+R+S+ SR HLMNKCRTS
Sbjct: 121 MRLWIVGYDLGCILSLLLLYGRYWHLYLMHGERVGLSDTEQRRTSQASRSLHLMNKCRTS 180
Query: 178 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 237
LELFFAIWFVMGNVW+ DSRF SFQRAP LH+LC+ LL WNA+ YSFPF+LFLLLCCCVP
Sbjct: 181 LELFFAIWFVMGNVWIVDSRFSSFQRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVP 240
Query: 238 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKY 297
L+SS+LGYN++M + DK A DDQIS+LP WRYK V S N EDPECCICL KY
Sbjct: 241 LVSSLLGYNISMASTDKAALDDQISQLPCWRYK-VSSMQPDSNEGLPKEDPECCICLVKY 299
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+++EEVR+LPCSH FHL+CVD+WL I S CPLCKQ+L
Sbjct: 300 RDEEEVRQLPCSHFFHLRCVDKWLSITSSCPLCKQQL 336
>gi|9758617|dbj|BAB09279.1| unnamed protein product [Arabidopsis thaliana]
Length = 320
Score = 365 bits (937), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 193/278 (69%), Positives = 225/278 (80%), Gaps = 7/278 (2%)
Query: 1 MNTRYSFPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGA-----PSFLIRTAMRIS 55
MNTRYS + L +S+ T+ SSS + N A A SF IR AM++S
Sbjct: 1 MNTRYSNQPE-LSSSNITITISSSALLSSSPRGDNSHVAAANGQERSPSSFYIRLAMKVS 59
Query: 56 RARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPI 115
RARWF FLRRVFHYQNGSRSDLGSNPFNSSTWM EL+ALLVQ+++ITFTL+ISK+E PI
Sbjct: 60 RARWFIFLRRVFHYQNGSRSDLGSNPFNSSTWMMSELIALLVQLTVITFTLAISKEERPI 119
Query: 116 WPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQ-RSSEDSRFSHLMNKC 174
WP+R+WI GYD+GCLL+L+LLYGRYRQL +Q +GF L DVEQQ R E++R SHLMNKC
Sbjct: 120 WPVRLWITGYDVGCLLNLMLLYGRYRQLDINQGNGFVLGDVEQQQRGREETRSSHLMNKC 179
Query: 175 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 234
RTSLELFFAIWFV+GNVWVFDSRFGSF AP LHVLC+SLLAWNA+ YSFPFLLFL LCC
Sbjct: 180 RTSLELFFAIWFVIGNVWVFDSRFGSFHHAPKLHVLCVSLLAWNAICYSFPFLLFLFLCC 239
Query: 235 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV 272
VPLISS+LGYNMNMG++D+ ASDDQIS LPSW++KR+
Sbjct: 240 LVPLISSLLGYNMNMGSSDRAASDDQISSLPSWKFKRI 277
>gi|357130798|ref|XP_003567033.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 321
Score = 334 bits (856), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 177/328 (53%), Positives = 225/328 (68%), Gaps = 11/328 (3%)
Query: 9 SDSLCNSSTTVPYSSSPP-ATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVF 67
D N+ P ++ PP A A PA + A +F +R R+SRARWF FLRRV+
Sbjct: 2 GDQHANAPFLPPTTAMPPQAPSSSAATTPPAGTSRASAFTMRAVARMSRARWFIFLRRVY 61
Query: 68 HYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDI 127
YQNG RSDLGSNPFNS W+ LEL ++ Q+ I T + S KE P WP+R+W+ Y++
Sbjct: 62 QYQNGPRSDLGSNPFNSPGWLALELGVIVAQMLITTVVVVSSPKERPAWPLRLWVAAYNV 121
Query: 128 GCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSR-FSHLMNKCRTSLELFFAIWF 186
G +LSL LL+ R+R A+ D E +S+ R S+LMNK R LELFFA+WF
Sbjct: 122 GNVLSLPLLFWRHRHSSAAGRGD----DPEMHGASDALRNSSYLMNKARAFLELFFAMWF 177
Query: 187 VMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYN 246
VMGNVWVFD+R GSF RAP L+ LCI LL+WNA+ YS PFLLFLLLCC VP++ LGYN
Sbjct: 178 VMGNVWVFDARLGSFHRAPRLYALCIGLLSWNAIVYSLPFLLFLLLCCFVPVVGYALGYN 237
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 306
MN + +GASD+Q++ LP WR+K D + ++D ECCICLA+Y+EKEE+R+L
Sbjct: 238 MNSASIGRGASDEQLAALPRWRFKEPDVPRDR-----EHDDQECCICLAQYREKEEMRQL 292
Query: 307 PCSHMFHLKCVDQWLRILSCCPLCKQEL 334
PC+HMFHLKCVD+WLRI+S CPLCKQEL
Sbjct: 293 PCTHMFHLKCVDRWLRIISSCPLCKQEL 320
>gi|125527404|gb|EAY75518.1| hypothetical protein OsI_03422 [Oryza sativa Indica Group]
Length = 304
Score = 333 bits (854), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 174/308 (56%), Positives = 219/308 (71%), Gaps = 15/308 (4%)
Query: 36 RPAARAGAP------SFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMT 89
RP + + P +F +R R+SRARWF FLRRV+ YQNG RSDLGSNPFNSS W+
Sbjct: 2 RPPSSSATPGTGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSSGWLA 61
Query: 90 LELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVD 149
LEL ++ Q+ + T ++ S KE P WP+R+W+ Y++G +LSL LLY R+R +S
Sbjct: 62 LELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRH-SSSGAR 120
Query: 150 GFSLPDVEQQRSSEDS--RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
G +L D + + D S+LMNK R LELFFA+WFVMGNVWVFD+R GSF RAP L
Sbjct: 121 GGTLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRL 180
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSW 267
+ LCI LLAWNA+ YS PFLLFLLLCC VP + LGYNMN + +GASD+Q++ LP W
Sbjct: 181 YALCIGLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALPQW 240
Query: 268 RYKR-VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
R+K D+ + ++D ECCICLA+YKEKEEVR+LPC+HMFHLKCVD+WLRI+S
Sbjct: 241 RFKEPADAPRDRD-----HDDQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISS 295
Query: 327 CPLCKQEL 334
CPLCKQEL
Sbjct: 296 CPLCKQEL 303
>gi|20804599|dbj|BAB92290.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|125571727|gb|EAZ13242.1| hypothetical protein OsJ_03165 [Oryza sativa Japonica Group]
gi|215712224|dbj|BAG94351.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 304
Score = 332 bits (850), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/308 (56%), Positives = 218/308 (70%), Gaps = 15/308 (4%)
Query: 36 RPAARAGAP------SFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMT 89
RP + + P +F +R R+SRARWF FLRRV+ YQNG RSDLGSNPFNS W+
Sbjct: 2 RPPSSSATPGTGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSPGWLA 61
Query: 90 LELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVD 149
LEL ++ Q+ + T ++ S KE P WP+R+W+ Y++G +LSL LLY R+R +S
Sbjct: 62 LELGVIMAQMVVTTAVVATSPKERPAWPLRVWVAAYNVGNVLSLPLLYWRHRH-SSSGAR 120
Query: 150 GFSLPDVEQQRSSEDS--RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
G +L D + + D S+LMNK R LELFFA+WFVMGNVWVFD+R GSF RAP L
Sbjct: 121 GGTLSDDPEMHGANDPLRNRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRL 180
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSW 267
+ LCI LLAWNA+ YS PFLLFLLLCC VP + LGYNMN + +GASD+Q++ LP W
Sbjct: 181 YALCIGLLAWNAVVYSLPFLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALPQW 240
Query: 268 RYKR-VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
R+K D+ + ++D ECCICLA+YKEKEEVR+LPC+HMFHLKCVD+WLRI+S
Sbjct: 241 RFKEPADAPRDRD-----HDDQECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISS 295
Query: 327 CPLCKQEL 334
CPLCKQEL
Sbjct: 296 CPLCKQEL 303
>gi|326505908|dbj|BAJ91193.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 720
Score = 330 bits (847), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 171/300 (57%), Positives = 214/300 (71%), Gaps = 12/300 (4%)
Query: 38 AARAGA--PSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLAL 95
A+R G +F +R R+SRARWF FLRRV+ YQNG RSDLGSNPFNS W+ LEL +
Sbjct: 429 ASRGGGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSPGWLALELGVI 488
Query: 96 LVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPD 155
+ Q+ I T ++ S KE P WP+R+W+ Y++G +LSL LLY R++ A++ D
Sbjct: 489 VAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWRHQHSLAARRGD----D 544
Query: 156 VEQQRSSEDSR-FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISL 214
E + + R S+LMNK R LELFFA+WFVMGNVWVFD+R GSF RAP L+ LCI L
Sbjct: 545 PEMHGAGDALRDSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGL 604
Query: 215 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS 274
LAWNA+ YS PFLLFLLLCC VP++ LGYNMN + +GASD+Q+ LP WR+K D
Sbjct: 605 LAWNAVVYSLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDALPRWRFKEPDV 664
Query: 275 NLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+ +D ECCICLA+Y+EKEEVR+LPC+HMFHLKCVD+WLRI+S CPLCKQEL
Sbjct: 665 PRDR-----EKDDQECCICLAQYREKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 719
>gi|326505186|dbj|BAK02980.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 305
Score = 327 bits (837), Expect = 7e-87, Method: Compositional matrix adjust.
Identities = 171/300 (57%), Positives = 214/300 (71%), Gaps = 12/300 (4%)
Query: 38 AARAGA--PSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLAL 95
A+R G +F +R R+SRARWF FLRRV+ YQNG RSDLGSNPFNS W+ LEL +
Sbjct: 14 ASRGGGRVSAFTMRAVARMSRARWFIFLRRVYQYQNGPRSDLGSNPFNSPGWLALELGVI 73
Query: 96 LVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPD 155
+ Q+ I T ++ S KE P WP+R+W+ Y++G +LSL LLY R++ A++ D
Sbjct: 74 VAQMLITTTVVATSPKERPAWPLRLWVTAYNVGNVLSLPLLYWRHQHSLAARRGD----D 129
Query: 156 VEQQRSSEDSR-FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISL 214
E + + R S+LMNK R LELFFA+WFVMGNVWVFD+R GSF RAP L+ LCI L
Sbjct: 130 PEMHGAGDALRDSSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFHRAPRLYALCIGL 189
Query: 215 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS 274
LAWNA+ YS PFLLFLLLCC VP++ LGYNMN + +GASD+Q+ LP WR+K D
Sbjct: 190 LAWNAVVYSLPFLLFLLLCCFVPVVGYALGYNMNSASVGRGASDEQLDALPRWRFKEPDV 249
Query: 275 NLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+ +D ECCICLA+Y+EKEEVR+LPC+HMFHLKCVD+WLRI+S CPLCKQEL
Sbjct: 250 PRDR-----EKDDQECCICLAQYREKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 304
>gi|414880832|tpg|DAA57963.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 429
Score = 323 bits (829), Expect = 6e-86, Method: Compositional matrix adjust.
Identities = 177/350 (50%), Positives = 226/350 (64%), Gaps = 27/350 (7%)
Query: 6 SFPSDSLCNSSTTVPYSSSPPATEDR-------------------MARNRPAARAGAPSF 46
SFP ++ P ++PP+ R A P R A
Sbjct: 87 SFPKKTIAPCQCASPRRAAPPSPHVRHCVSAMRPPSSSSSSSSSPAAVPEPGGRMSA--L 144
Query: 47 LIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTL 106
+R R+SRARWF FLRRV+ YQNG RSDLGSNPFNS W+ LEL ++ Q+ + T +
Sbjct: 145 TMRAVARMSRARWFVFLRRVYQYQNGPRSDLGSNPFNSPGWLALELGVIVAQVVLTTAVV 204
Query: 107 SISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSE-DS 165
+ S E P WP+R+W+ Y++G +LSL LLY R+R +S G D+E +++
Sbjct: 205 ATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWRHRHSSSSSSAGGGRGDLEMHGANDAPG 264
Query: 166 RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFP 225
S+LMNK R LELFFA+WFVMGNVWVFD+R GSFQRAP L+ LC+SLLAWNA+ YS P
Sbjct: 265 NRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAPRLYALCVSLLAWNAVVYSLP 324
Query: 226 FLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN 285
FLLFLLLCC VP + LGYNMN + +GASD+Q++ LP WR+K D +
Sbjct: 325 FLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALPRWRFKEPDVARDR-----ER 379
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+D ECCICLA+Y EKEEVR+LPC+H+FHLKCVD+WLRI+S CPLCKQEL+
Sbjct: 380 DDQECCICLAQYGEKEEVRQLPCTHVFHLKCVDRWLRIISSCPLCKQELK 429
>gi|224056495|ref|XP_002298884.1| predicted protein [Populus trichocarpa]
gi|222846142|gb|EEE83689.1| predicted protein [Populus trichocarpa]
Length = 171
Score = 263 bits (672), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 144/171 (84%), Positives = 154/171 (90%), Gaps = 5/171 (2%)
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 230
M+KCRTSLELFFAIWFVMGNVWVFDSRFGS+ RAP LHVLCISLLAWNALSYSFPFLLFL
Sbjct: 1 MHKCRTSLELFFAIWFVMGNVWVFDSRFGSYHRAPKLHVLCISLLAWNALSYSFPFLLFL 60
Query: 231 LLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN----- 285
LLCCCVPLIS+VLGYNMNMG+A++GASDDQIS LPSWRYK D+N E N+A N
Sbjct: 61 LLCCCVPLISTVLGYNMNMGSAERGASDDQISSLPSWRYKAADTNSEFRNNADCNSTIAS 120
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
ED ECCICLAKYK+KEEVRKLPCSHMFHLKCVDQWLRI+SCCPLCKQ LER
Sbjct: 121 EDLECCICLAKYKDKEEVRKLPCSHMFHLKCVDQWLRIISCCPLCKQGLER 171
>gi|414880831|tpg|DAA57962.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 469
Score = 241 bits (614), Expect = 5e-61, Method: Compositional matrix adjust.
Identities = 138/288 (47%), Positives = 178/288 (61%), Gaps = 22/288 (7%)
Query: 6 SFPSDSLCNSSTTVPYSSSPPATEDR-------------------MARNRPAARAGAPSF 46
SFP ++ P ++PP+ R A P R A
Sbjct: 87 SFPKKTIAPCQCASPRRAAPPSPHVRHCVSAMRPPSSSSSSSSSPAAVPEPGGRMSA--L 144
Query: 47 LIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTL 106
+R R+SRARWF FLRRV+ YQNG RSDLGSNPFNS W+ LEL ++ Q+ + T +
Sbjct: 145 TMRAVARMSRARWFVFLRRVYQYQNGPRSDLGSNPFNSPGWLALELGVIVAQVVLTTAVV 204
Query: 107 SISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSE-DS 165
+ S E P WP+R+W+ Y++G +LSL LLY R+R +S G D+E +++
Sbjct: 205 ATSAAERPAWPLRLWVAAYNVGNVLSLPLLYWRHRHSSSSSSAGGGRGDLEMHGANDAPG 264
Query: 166 RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFP 225
S+LMNK R LELFFA+WFVMGNVWVFD+R GSFQRAP L+ LC+SLLAWNA+ YS P
Sbjct: 265 NRSYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAPRLYALCVSLLAWNAVVYSLP 324
Query: 226 FLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVD 273
FLLFLLLCC VP + LGYNMN + +GASD+Q++ LP WR+K D
Sbjct: 325 FLLFLLLCCFVPAVGYALGYNMNSASVGRGASDEQLAALPRWRFKEPD 372
>gi|125541404|gb|EAY87799.1| hypothetical protein OsI_09219 [Oryza sativa Indica Group]
gi|125583947|gb|EAZ24878.1| hypothetical protein OsJ_08658 [Oryza sativa Japonica Group]
Length = 398
Score = 211 bits (538), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 124/369 (33%), Positives = 192/369 (52%), Gaps = 52/369 (14%)
Query: 7 FPSDSLCNSSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRV 66
P DS ST+ +S + + +R A RA P+ +A+ A + RR
Sbjct: 16 IPRDS--GPSTSTSHSVARENHGEPNPVDRSATRALVPALQAPSAVGAPSAGHTSGARRS 73
Query: 67 FHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYD 126
+Y RS P NS W+++E+L + QI LS+S+KE P P+ W++GY
Sbjct: 74 DNYVRRHRS-----PLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYT 128
Query: 127 IGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDS--------------------- 165
+GC +L LY RY ++ + V+G + P Q SS+++
Sbjct: 129 VGCFATLPHLYWRY--IHRNIVNGENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVL 186
Query: 166 ---RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY 222
R + L + + +L+ FFA+WFV+GNVW+F R S APNL+ LCI L ++ + Y
Sbjct: 187 ANPRINALFDHFKMALDCFFAVWFVVGNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGY 245
Query: 223 SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSA 282
+ PF+L ++CCC+P I SV+G+ + +GA+ + I+ LP++++K +GN A
Sbjct: 246 AMPFILCAMICCCLPCIISVMGFREDTNNT-RGATSESINSLPTYKFKTKKRRHSSGNEA 304
Query: 283 PAN-----------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 325
ED CCICLAKY +E+R+LPC+H FH +CVD+WL+I +
Sbjct: 305 EGQDGGIVAAGTDKERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINA 364
Query: 326 CCPLCKQEL 334
CPLCK E+
Sbjct: 365 LCPLCKSEI 373
>gi|359482955|ref|XP_002280466.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
gi|297743322|emb|CBI36189.3| unnamed protein product [Vitis vinifera]
Length = 416
Score = 204 bits (518), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 122/336 (36%), Positives = 186/336 (55%), Gaps = 39/336 (11%)
Query: 24 SPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFN 83
+PP E+R P++ P+ +T+ +R +F+RR Y RS P N
Sbjct: 56 NPPQHEER-----PSSSTQTPTN--QTSSNRLNSRNSSFMRRSDGYSRRRRS-----PLN 103
Query: 84 SSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL 143
S W+++EL+ + QI LS+S+ E+P P+ W+VGY GC +L +LY RYR
Sbjct: 104 SGLWISVELVVTVSQIIASIVVLSLSRHENPRAPLFAWVVGYASGCFATLPILYWRYRTR 163
Query: 144 YAS-QVDGFSLPDVEQQRSSE-----DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSR 197
+ V+ S R S RFS +++ + +L+ FFA+WFV+GNVW+F
Sbjct: 164 NQTISVNQASETAGAATRRSRFVGIFRMRFSGMVDHFKMALDCFFAVWFVVGNVWIFGGH 223
Query: 198 FGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS 257
S AP L+ LCI L ++ + Y+ PF+L +CCC+P I S+LG+ ++ + +GA+
Sbjct: 224 -SSPSDAPKLYRLCIVFLTFSCIGYAMPFILCATICCCLPCIISILGFREDL-SQTRGAA 281
Query: 258 DDQISRLPSWRYK----------RVDSN------LEAGNS---APANEDPECCICLAKYK 298
+ I LP++++K V+S L AG A + ED CCICLAKY
Sbjct: 282 PESIDALPTYKFKLKKNGDVDDQEVNSGAGEGGVLAAGTEKERAISGEDAVCCICLAKYA 341
Query: 299 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+ EE+R+LPC H FH++CVD+WL+I + CPLCK E+
Sbjct: 342 DNEELRELPCCHFFHVECVDKWLKINALCPLCKFEV 377
>gi|115449125|ref|NP_001048342.1| Os02g0787500 [Oryza sativa Japonica Group]
gi|113537873|dbj|BAF10256.1| Os02g0787500, partial [Oryza sativa Japonica Group]
Length = 342
Score = 203 bits (517), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/296 (35%), Positives = 165/296 (55%), Gaps = 45/296 (15%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++E+L + QI LS+S+KE P P+ W++GY +GC +L LY R
Sbjct: 26 SPLNSGLWISIEVLVNVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWR 85
Query: 140 YRQLYASQVDGFSLPDVEQQRSSEDS------------------------RFSHLMNKCR 175
Y ++ + V+G + P Q SS+++ R + L + +
Sbjct: 86 Y--IHRNIVNGENEPAHTLQGSSQNNSTEPSASASERRRNAARNAVLANPRINALFDHFK 143
Query: 176 TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCC 235
+L+ FFA+WFV+GNVW+F R S APNL+ LCI L ++ + Y+ PF+L ++CCC
Sbjct: 144 MALDCFFAVWFVVGNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCC 202
Query: 236 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN---------- 285
+P I SV+G+ + +GA+ + I+ LP++++K +GN A
Sbjct: 203 LPCIISVMGFREDTNNT-RGATSESINSLPTYKFKTKKRRHSSGNEAEGQDGGIVAAGTD 261
Query: 286 -------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED CCICLAKY +E+R+LPC+H FH +CVD+WL+I + CPLCK E+
Sbjct: 262 KERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINALCPLCKSEI 317
>gi|356507782|ref|XP_003522643.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 385
Score = 203 bits (516), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 113/301 (37%), Positives = 166/301 (55%), Gaps = 48/301 (15%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+ +EL+ + QI LS+SK E P P+ WIVGY GC+ +L LLY R
Sbjct: 56 SPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPHAPLIAWIVGYASGCVATLPLLYWR 115
Query: 140 Y------RQLYASQVD------------------GFSLPDVEQQRSSEDS-----RFSHL 170
Y R+ +SQ G P + RS+++S R L
Sbjct: 116 YYHNRGVREQESSQASPRSNDPSGTLLSDSTTNGGEDAPASSRTRSNQESWLMNARLKLL 175
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 230
+ + +++ FFAIWFV+GNVW+F S +APNL+ LC+ L ++ + Y+ PF+L
Sbjct: 176 VEYFKIAVDCFFAIWFVVGNVWIFGGH-SSADQAPNLYRLCVVFLTFSCIGYAMPFILCA 234
Query: 231 LLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK------RVDSNLEAGNSAP- 283
+CCC+P I S+LG +M A +GAS + I+ LP++++K + +SN G
Sbjct: 235 TICCCLPCIISILGVREDM-AQTRGASSESINALPTYKFKMKRNKSKGESNSAVGEGGVV 293
Query: 284 ----------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 333
+ ED CCICLAKY+ +E+R+LPCSH+FH CVD+WL+I + CPLCK E
Sbjct: 294 AAGTEKERMISGEDAACCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLCKSE 353
Query: 334 L 334
+
Sbjct: 354 V 354
>gi|255551132|ref|XP_002516614.1| ring finger protein, putative [Ricinus communis]
gi|223544434|gb|EEF45955.1| ring finger protein, putative [Ricinus communis]
Length = 437
Score = 201 bits (510), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 112/307 (36%), Positives = 164/307 (53%), Gaps = 54/307 (17%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL+ + QI LS+S+ E P P+ WIVGY GC+ +L LLY R
Sbjct: 102 SPLNSGLWISVELVLTVSQIIASIVVLSLSRHEHPRAPLFAWIVGYASGCVATLPLLYWR 161
Query: 140 YRQ---------LYASQVDGFSLP----DVEQQRSSE--------------------DSR 166
YR Q FS+P + R+SE ++R
Sbjct: 162 YRHRNQVTEQEAAQPRQSSHFSVPGDSISISITRNSEVVDRRSSSTSSRGGQNSGALNAR 221
Query: 167 FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF 226
L+ + +L+ FFA+WFV+GNVW+F S APN++ LCI L ++ + Y+ PF
Sbjct: 222 LKTLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSATEAPNMYRLCIVFLTFSCIGYAMPF 280
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK--------RVDSNLEA 278
+L +CCC+P I S+LG+ ++G +GA+ + I LP++++K DSN A
Sbjct: 281 ILCATICCCLPCIISLLGFREDLGQT-RGATSESIDALPTYKFKLNKHRTGDDRDSNSGA 339
Query: 279 GNSAP-----------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
G+ + ED CCICLAKY +E+R+LPCSH FH CVD+WL+I + C
Sbjct: 340 GDGGVVAAGTEHERFISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINASC 399
Query: 328 PLCKQEL 334
PLCK E+
Sbjct: 400 PLCKTEV 406
>gi|293333937|ref|NP_001169753.1| uncharacterized protein LOC100383634 [Zea mays]
gi|223975755|gb|ACN32065.1| unknown [Zea mays]
gi|224031459|gb|ACN34805.1| unknown [Zea mays]
gi|413939252|gb|AFW73803.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 401
Score = 199 bits (507), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 116/368 (31%), Positives = 182/368 (49%), Gaps = 59/368 (16%)
Query: 19 VPYSSSPPATEDRMAR----------NRPAARAGAPSFLIRTAM-RISRARWFNFLRRVF 67
+P PPA+ R A +RP+ RA P+ +A+ + + RR
Sbjct: 16 IPREIGPPASVSRSAGRENHEESNPVDRPSTRALVPALQAPSAIGAVPITGHTSGTRRND 75
Query: 68 HYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDI 127
+Y RS P NS W+++E++ QI L +S+KE P P+ W++GY +
Sbjct: 76 NYVRRHRS-----PLNSGLWISIEVIVNFSQIVAAIVVLCVSRKEHPQAPLLEWVIGYTV 130
Query: 128 GCLLSLLLLYGRY--RQLYASQVDGFSLPDVEQQRSSEDS-------------------- 165
GC +L LY RY R + + + P +S ++
Sbjct: 131 GCFATLPHLYWRYIHRNIVNGEHESSHTPQGSAHNNSNEATHAASASERRRNAARNAVLA 190
Query: 166 --RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYS 223
R + L + + +L+ FFA+WFV+GNVW+F R S APNL+ LCI L ++ + Y+
Sbjct: 191 NPRINALFDHFKMALDCFFAVWFVVGNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYA 249
Query: 224 FPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP 283
PF+L ++CCC+P I S++G+ + +GAS + I+ LP++++K +G+
Sbjct: 250 MPFILCAMICCCLPCIISIMGFREDTNNT-RGASSESINALPTYKFKIKKRRHGSGSETE 308
Query: 284 ANE-----------------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
E D CCICLAKY +E+R+LPC+H FH CVD+WL+I +
Sbjct: 309 GQEGGILAAGTDKERSLSAEDAVCCICLAKYAHNDELRELPCAHCFHKDCVDKWLKINAL 368
Query: 327 CPLCKQEL 334
CPLCK E+
Sbjct: 369 CPLCKSEI 376
>gi|224092390|ref|XP_002309588.1| predicted protein [Populus trichocarpa]
gi|222855564|gb|EEE93111.1| predicted protein [Populus trichocarpa]
Length = 406
Score = 198 bits (504), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 114/306 (37%), Positives = 165/306 (53%), Gaps = 54/306 (17%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL+ L QI LS+S+ E P P+ WIVGY GC+ +L LLY R
Sbjct: 101 SPLNSGLWISVELVLTLSQIVASIVVLSVSRHEHPHAPLFAWIVGYASGCVATLPLLYWR 160
Query: 140 YR-------QLYASQVDG----------FSLPDVEQQRSSED-----------------S 165
YR Q A G FSL V + S+D +
Sbjct: 161 YRYRNQSLEQDSAQNHQGSAHINVPAGPFSL-SVSRNSESDDRRSATTSPRGSQNAVLNA 219
Query: 166 RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFP 225
R L+ + +L+ FFA+WFV+GNVW+F S + APNL+ LCI L ++ + Y+ P
Sbjct: 220 RLKVLVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAEEAPNLYRLCIVFLTFSCIGYAMP 278
Query: 226 FLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN 285
F+L +CCC+P I SVLGY ++ +GA+ + I LP++++K + + +SA A+
Sbjct: 279 FILCATICCCLPCIISVLGYREDL-TQTRGATTESIDALPTYKFKLIKNRNGEDSSAGAS 337
Query: 286 -----------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 328
ED CCICLAK+ +E+R+LPCSH FH +CVD+WL+I + CP
Sbjct: 338 DGGVVAAGTEKERVISGEDAVCCICLAKFANNDELRELPCSHFFHKECVDKWLKINASCP 397
Query: 329 LCKQEL 334
LCK E+
Sbjct: 398 LCKSEV 403
>gi|357113469|ref|XP_003558525.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 407
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 115/343 (33%), Positives = 176/343 (51%), Gaps = 50/343 (14%)
Query: 35 NRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLA 94
+RP+ RA + A+ A + RR +Y RS P NS W+++E++
Sbjct: 47 DRPSTRALTSALQPPAAVGPPHAGNTSGARRGDNYGRRHRS-----PLNSGLWISIEVIV 101
Query: 95 LLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----------RQLY 144
+ QI LS+S+KE P P+ W++GY +GC +L LY RY Q +
Sbjct: 102 NVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRYIHRNIVNGENEQAH 161
Query: 145 A----SQVDGFSLPDVEQQRSSE------------DSRFSHLMNKCRTSLELFFAIWFVM 188
+ SQ S +SE + R + L + + +L+ FFA+WFV+
Sbjct: 162 SLQGSSQSQNNSTEPTHAASASERRRTAARNAVLANPRINALFDHFKMALDCFFAVWFVV 221
Query: 189 GNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMN 248
GNVW+F R S APNL+ LCI L ++ + Y+ PF+L ++CCC+P I SV+G+ +
Sbjct: 222 GNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCLPCIISVMGFRED 280
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-----------------EDPECC 291
+GA+ + I+ LP++++K +GN A ED CC
Sbjct: 281 TNNT-RGATSESINSLPTYKFKTKKRRHGSGNDAEGQDGGILAAGTDKERSLSAEDAVCC 339
Query: 292 ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ICLAKY +E+R+L C+H FH +CVD+WL+I + CPLCK E+
Sbjct: 340 ICLAKYAHNDELRELACTHCFHKECVDKWLKINALCPLCKSEI 382
>gi|444436429|gb|AGE09582.1| C3HC4Z1-like protein, partial [Eucalyptus cladocalyx]
Length = 137
Score = 198 bits (504), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/137 (75%), Positives = 120/137 (87%), Gaps = 5/137 (3%)
Query: 205 PNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRL 264
P LH+LCISLLAWNA+SYSFPFLLFLLLCC VPL+S+ LGYNMN+ + ++GASDDQISRL
Sbjct: 1 PKLHMLCISLLAWNAVSYSFPFLLFLLLCCFVPLMSTFLGYNMNVASVERGASDDQISRL 60
Query: 265 PSWRYKRVDSNLEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
PSW+YK+VD+NL G+ + ANED ECCICL+KYKE+EEVR+LPCSHMFH KCVDQ
Sbjct: 61 PSWKYKQVDNNLGLGDDSNHNLVLANEDKECCICLSKYKEREEVRQLPCSHMFHQKCVDQ 120
Query: 320 WLRILSCCPLCKQELER 336
WLRI SCCPLCK+ELER
Sbjct: 121 WLRITSCCPLCKKELER 137
>gi|224143048|ref|XP_002324833.1| predicted protein [Populus trichocarpa]
gi|222866267|gb|EEF03398.1| predicted protein [Populus trichocarpa]
Length = 434
Score = 196 bits (497), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 115/308 (37%), Positives = 163/308 (52%), Gaps = 56/308 (18%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL+ L QI LS+S+KE P P+ WIVGY GC+ +L LLY R
Sbjct: 99 SPLNSGLWISVELVLTLSQIIASIVVLSVSRKEHPRAPLFAWIVGYASGCVATLPLLYWR 158
Query: 140 Y-------RQLYASQVDG----------FSLPDVEQQRSSEDSR---------------- 166
Y Q A G FSL V + ED R
Sbjct: 159 YSHRNQALEQDSAQNHQGSAHINVPAGPFSL-SVSRNSEGEDRRSATTSPRGGQNAVLNA 217
Query: 167 ---FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYS 223
L+ + +L+ FFA+WFV+GNVW+F S S + APNL+ LCI L ++ + Y+
Sbjct: 218 RYELKVLLEYFKMALDCFFAVWFVVGNVWIFGSH-SSAEEAPNLYRLCIVFLTFSCIGYA 276
Query: 224 FPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV-DSNLEAGNSA 282
PF+L +CCC+P I S+LG+ ++ +GA+ + I LP+ ++K + + N E +S
Sbjct: 277 MPFILCATICCCLPCIISILGFREDL-TQTRGATPESIDALPTHKFKLIKNRNGEDSSSG 335
Query: 283 PAN----------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
A+ ED CCICLAKY +E+R+LPCSH FH CVD+WL+I +
Sbjct: 336 AADGGIVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLKINAS 395
Query: 327 CPLCKQEL 334
CPLCK E+
Sbjct: 396 CPLCKSEV 403
>gi|356550569|ref|XP_003543658.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 419
Score = 194 bits (494), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 115/328 (35%), Positives = 169/328 (51%), Gaps = 65/328 (19%)
Query: 63 LRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWI 122
LRR Y + RS P NS W+++EL+ + QI LS+S+ E+P P+ WI
Sbjct: 91 LRRGDGYGHRGRS-----PLNSGLWISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWI 145
Query: 123 VGYDIGCLLSLLLLYGRYRQ----------------------------LYASQVDGFSLP 154
VGY GC+ +L +LY R+R +Y S V
Sbjct: 146 VGYGSGCVATLPILYWRFRNRNQSNEQDTSQASQGSSGSNPPDRSYTSIYVSHVSDEENG 205
Query: 155 DVEQQRSSED-------SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
Q S SR + L++ + +L+ FFA+WFV+GNVW+F S AP L
Sbjct: 206 HATQSASRNTIMPGAFTSRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHT-SPSDAPQL 264
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSW 267
+ LCI L ++ + Y+ PF+L +CCC+P I SVLG + + ++GA+ + I+ LP +
Sbjct: 265 YRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDF-SQNRGATVESINALPIF 323
Query: 268 RYKRVDSNLEAGNSAPAN---------------------EDPECCICLAKYKEKEEVRKL 306
++K N E G+ AN ED CCICLAKY + +E+R+L
Sbjct: 324 KFKL--KNNENGDDQDANSAIDEGGILAAGTEKERMISGEDAVCCICLAKYADDDELREL 381
Query: 307 PCSHMFHLKCVDQWLRILSCCPLCKQEL 334
PCSH+FH++CVD+WL+I + CPLCK E+
Sbjct: 382 PCSHVFHVECVDKWLKINATCPLCKNEV 409
>gi|15220126|ref|NP_178156.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|12324974|gb|AAG52430.1|AC018848_1 putative RING zinc finger protein; 53384-54880 [Arabidopsis
thaliana]
gi|17065538|gb|AAL32923.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|23197724|gb|AAN15389.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|222423453|dbj|BAH19697.1| AT1G80400 [Arabidopsis thaliana]
gi|332198277|gb|AEE36398.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 407
Score = 194 bits (493), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 107/313 (34%), Positives = 167/313 (53%), Gaps = 54/313 (17%)
Query: 71 NGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCL 130
NG R+ +P NS W+++EL+ + QI + ++K E P P+ W++GY GCL
Sbjct: 92 NGRRT---RSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVIGYTCGCL 148
Query: 131 LSLLLLYGRYR------------QLYASQVDGFSLP----DVEQQRSSEDS--------- 165
+L +LY R+R + +SQ + S P V Q E+S
Sbjct: 149 ATLPILYWRFRTYNRATGQDSSQRATSSQGNSESTPYTAVSVAQAADEENSTGVSAAPRN 208
Query: 166 ---------RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 216
R + L++ + +++ FFA+WFV+GNVW+F S +P L+ LCI+ L
Sbjct: 209 NQVGESLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFGGH-SSPSDSPKLYRLCIAFLT 267
Query: 217 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN- 275
++ + Y+ PF+L +CCC+P + SVLG+ N + +GA+ + I+ LP +R+K N
Sbjct: 268 FSCIGYAMPFILCATICCCLPCLISVLGFRENF-SQTRGATAEAINALPVYRFKSKSRND 326
Query: 276 ---LEAGNSA-----------PANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL 321
E G + ED CCICL +Y + E+VR+LPCSH+FH+ CVD+WL
Sbjct: 327 LEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDEQVRELPCSHVFHVDCVDKWL 386
Query: 322 RILSCCPLCKQEL 334
+I + CPLCK E+
Sbjct: 387 KINATCPLCKNEV 399
>gi|296081927|emb|CBI20932.3| unnamed protein product [Vitis vinifera]
Length = 401
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 165/309 (53%), Gaps = 56/309 (18%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL + QI LS+S+ E P P+ WIVGY GC+ +L +LY R
Sbjct: 81 SPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWR 140
Query: 140 YRQL---------------YASQVDG---FSL------------PDVEQQRSSED----- 164
+R + S + G FSL P V R+S+
Sbjct: 141 FRHRNQGHEQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLS 200
Query: 165 SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 224
+R L+ + +L+ FFA+WFV+GNVW+F S APNL+ LCI L ++ + Y+
Sbjct: 201 ARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSS-SEAPNLYRLCIVFLTFSCIGYAM 259
Query: 225 PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK---RVDSNLEAGNS 281
PF+L +CCC+P I S+LG+ ++ +GA+ + I+ LP++++K + + GNS
Sbjct: 260 PFILCATICCCLPCIISILGFREDL-TQTRGATSESINALPTYKFKLKKNRNGDDREGNS 318
Query: 282 APA----------------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 325
ED CCICLAKY +E+R+LPCSH FH +CVD+WL+I +
Sbjct: 319 GAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINA 378
Query: 326 CCPLCKQEL 334
CPLCK+E+
Sbjct: 379 LCPLCKREV 387
>gi|359476391|ref|XP_002284536.2| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 421
Score = 192 bits (489), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/309 (35%), Positives = 165/309 (53%), Gaps = 56/309 (18%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL + QI LS+S+ E P P+ WIVGY GC+ +L +LY R
Sbjct: 101 SPLNSGLWISIELALTVSQIIASVVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWR 160
Query: 140 YRQL---------------YASQVDG---FSL------------PDVEQQRSSED----- 164
+R + S + G FSL P V R+S+
Sbjct: 161 FRHRNQGHEQESAQSRQVSFHSNLPGGPTFSLSVTGTSEEEDRQPSVPATRNSQSVRRLS 220
Query: 165 SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 224
+R L+ + +L+ FFA+WFV+GNVW+F S APNL+ LCI L ++ + Y+
Sbjct: 221 ARLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSS-SEAPNLYRLCIVFLTFSCIGYAM 279
Query: 225 PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK---RVDSNLEAGNS 281
PF+L +CCC+P I S+LG+ ++ +GA+ + I+ LP++++K + + GNS
Sbjct: 280 PFILCATICCCLPCIISILGFREDL-TQTRGATSESINALPTYKFKLKKNRNGDDREGNS 338
Query: 282 APA----------------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 325
ED CCICLAKY +E+R+LPCSH FH +CVD+WL+I +
Sbjct: 339 GAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECVDKWLKINA 398
Query: 326 CCPLCKQEL 334
CPLCK+E+
Sbjct: 399 LCPLCKREV 407
>gi|356554344|ref|XP_003545507.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 440
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 112/305 (36%), Positives = 165/305 (54%), Gaps = 54/305 (17%)
Query: 81 PFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY 140
P +S W+++EL+ LL QI LS+S+ E P P+ WI+GY GC +L LLY RY
Sbjct: 108 PVHSGLWISIELVLLLSQIVASIIVLSLSRHEHPRTPLFQWIIGYASGCAATLPLLYWRY 167
Query: 141 --------------RQ------------LYASQVDGF--SLPDVEQQRSSEDS-----RF 167
RQ L++S+ +G V RS++ S R
Sbjct: 168 YHHNHMQEQESSQSRQTSPRINDPSGTLLFSSRTNGGEDGQSAVASSRSNQPSLLMNRRM 227
Query: 168 SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFL 227
L+ + SL+ FFA+WFV+GNVW+F S APNL+ LCI LA++ + Y+ PF+
Sbjct: 228 KTLVEYFKISLDCFFAVWFVVGNVWIFGGH-SSANEAPNLYRLCIVFLAFSCIGYAMPFI 286
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP---- 283
+CCC+P I S+LG +M + ++GA+ + I+ LP +++K + N GN
Sbjct: 287 FCSTICCCLPCIISILGVREDM-SQNRGATSESINALPIYKFK-MKKNKRNGNGNSAAAE 344
Query: 284 --------------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 329
+ ED CCICLAKY+ +E+R+LPCSH+FH CVD+WL+I + CPL
Sbjct: 345 GGVVAAGTEKEHVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPL 404
Query: 330 CKQEL 334
CK ++
Sbjct: 405 CKSDV 409
>gi|255552959|ref|XP_002517522.1| ring finger protein, putative [Ricinus communis]
gi|223543154|gb|EEF44686.1| ring finger protein, putative [Ricinus communis]
Length = 421
Score = 192 bits (489), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/308 (35%), Positives = 166/308 (53%), Gaps = 55/308 (17%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+PFNS W+++EL + QI LS+S+ E+P P+ W+VGY GC+ +L +LY R
Sbjct: 100 SPFNSGLWISIELFVTVGQIIASIVVLSLSRNENPQAPLFAWVVGYASGCVATLPILYWR 159
Query: 140 YRQLYAS-QVDGF---------SLPDVEQ-------QRSSED------------------ 164
+R S Q D + PD Q S ED
Sbjct: 160 FRNRNQSGQQDSHQSHQGSSQNNPPDTSSYTAISVTQASEEDNFRSELAIANGQTGRPLS 219
Query: 165 SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF 224
SR + LM+ + +L+ FFA+WFV+GNVW+F + AP L+ LCI L ++ + Y+
Sbjct: 220 SRLNGLMDHFKMALDCFFAVWFVVGNVWIFGGH-STPTDAPKLYKLCIVFLTFSCIGYAM 278
Query: 225 PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK-----RVDSNLEAG 279
PF+L +CCC+P I S+LG+ + + +GA+ + I+ LP +++K V+ + +G
Sbjct: 279 PFILCATICCCLPCIISLLGFREDF-SQTRGATTESINSLPIYKFKLQKSESVNDHDNSG 337
Query: 280 NS-------------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
A + ED CCICL KY + +E+R+LPCSH+FH+ CVD+WL+I +
Sbjct: 338 TGEGGVLAEGTEKERAISGEDAICCICLNKYADNDELRELPCSHVFHVDCVDKWLKINAS 397
Query: 327 CPLCKQEL 334
CPLCK EL
Sbjct: 398 CPLCKSEL 405
>gi|449442204|ref|XP_004138872.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449499624|ref|XP_004160867.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 424
Score = 191 bits (484), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 122/372 (32%), Positives = 180/372 (48%), Gaps = 63/372 (16%)
Query: 17 TTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSD 76
+ +P+ S +RP++ P T+ S +R +F+RR + S
Sbjct: 45 SGLPHGRSSNGLNSSQPEDRPSSSTRVPLSQPSTSSTGSNSRNSSFIRRGDARRRRS--- 101
Query: 77 LGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL 136
P NS W+++ELL + QI LS+SK E P P+ WIVGY GC +L LL
Sbjct: 102 ----PLNSGLWISIELLLTMSQIIAAIIVLSLSKNEKPRAPLFAWIVGYASGCGATLPLL 157
Query: 137 YGRYRQLYASQ-----------------VDGFSL-----------------PDVEQQRSS 162
Y RYR + FSL P Q
Sbjct: 158 YWRYRHRNQASEQDSLQSSQSSSRINVPAGPFSLSVSRASEGEELQHPAPSPRGSQGSGV 217
Query: 163 EDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY 222
+R L+ + L+ FFA+WFV+GNVW+F S APNL+ LCI L ++ + Y
Sbjct: 218 LSARLKVLVEYFKMGLDCFFAVWFVVGNVWIFGGH-SSASEAPNLYRLCIVFLTFSCIGY 276
Query: 223 SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK----RVDSNLEA 278
+ PF+L + +CCC+P I S+LG+ ++ + +GA+ + I+ LP++++K R + E
Sbjct: 277 AMPFILCVTICCCLPCIISILGFREDL-SQTRGATSESINALPTYKFKLKKSRSGDDREN 335
Query: 279 GNSAP----------------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR 322
+ A + ED CCICLAKY +E+R+LPCSH FH CVD+WL+
Sbjct: 336 NSGAGEGGGVVAAGTEKERVISGEDAVCCICLAKYANNDELRELPCSHFFHKDCVDKWLK 395
Query: 323 ILSCCPLCKQEL 334
I + CPLCK E+
Sbjct: 396 INALCPLCKAEV 407
>gi|357136383|ref|XP_003569784.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 409
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/314 (34%), Positives = 170/314 (54%), Gaps = 56/314 (17%)
Query: 73 SRSDLGS---NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGC 129
+R D G+ NP NS W+++EL+ + QI LS+S+ E P P+ W+VGY IGC
Sbjct: 70 TRRDQGNRQQNPLNSGLWISIELIVNVSQIIAAIAVLSVSRNEHPRAPLFEWVVGYIIGC 129
Query: 130 LLSLLLLYGRY-----------------RQLYASQVDGFSLPDVEQQRSSE--------- 163
+ ++ LY RY Q S+ D F+ + R+SE
Sbjct: 130 VATIPHLYWRYLHRNCQNIEQEPTTQGSSQRNISESDSFA--PISSARASEVGNEDNSTG 187
Query: 164 ---------DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISL 214
R L+ + +L+ FFA+WFV+GNVW+F R S APNL+ LCI
Sbjct: 188 VSRNNFPIASPRVYALIACLKLALDCFFAVWFVVGNVWIFGGR-SSVHDAPNLYRLCIVF 246
Query: 215 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV-- 272
L + + Y+ PF+L ++CCC+P I S++G++ ++ +KGA+ + I L +++YK +
Sbjct: 247 LTFGFIGYALPFILCTMICCCLPCIISMVGFHEDLDL-NKGATTEVIDALVAYKYKSMRI 305
Query: 273 -DSNLEAGNSAP-----------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
D ++ N + ED CCICL+K+ E++R+LPC+H+FH++C+D+W
Sbjct: 306 RDGDVGEDNGGVLGAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCAHVFHMECIDKW 365
Query: 321 LRILSCCPLCKQEL 334
L+I + CPLCK EL
Sbjct: 366 LKINALCPLCKSEL 379
>gi|302775586|ref|XP_002971210.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
gi|300161192|gb|EFJ27808.1| hypothetical protein SELMODRAFT_171829 [Selaginella moellendorffii]
Length = 392
Score = 191 bits (484), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 100/303 (33%), Positives = 159/303 (52%), Gaps = 50/303 (16%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL + QI LS+S+ E P P+ +W+ GY GCL +L LLY R
Sbjct: 71 SPLNSGLWISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWR 130
Query: 140 YRQLYASQVD---------------------------GFSLPDVEQQRSSEDSRFSHLMN 172
Y + ++P + +R L+
Sbjct: 131 YTHRNGTTQAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVESRARVGRLVE 190
Query: 173 KCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLL 232
K + +L+ FFA+WFV+GNVW+F S + APNL+ LCI L ++ + Y+ PF+L +
Sbjct: 191 KFKIALDCFFAVWFVVGNVWIFGGHSSS-REAPNLYRLCIVFLTFSCIGYAMPFILCATI 249
Query: 233 CCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR---------VDSNLEAGNS-- 281
CCC+P I ++LG+ A ++GAS + I+ LP++++K +S+ E N
Sbjct: 250 CCCLPCIIALLGFREEQ-AQNRGASAEVIAALPTYKFKSRPSSESKDGSESDSEGSNEGG 308
Query: 282 ----------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
A + +D CCICLA+Y++ E +R+L C+H FH+ CVD+WL+I + CPLCK
Sbjct: 309 FVAAGTDKERAVSADDAVCCICLARYRDGEPLRELSCTHHFHVDCVDKWLKINASCPLCK 368
Query: 332 QEL 334
++
Sbjct: 369 LDV 371
>gi|356561942|ref|XP_003549235.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 441
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 109/306 (35%), Positives = 165/306 (53%), Gaps = 54/306 (17%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P +S W+++EL+ L+ QI LS+S+ E P P+ WI+GY GC +L LLY R
Sbjct: 108 SPVHSGLWISIELVLLVSQIVASIIVLSLSRHEHPRTPLFHWIIGYASGCAATLPLLYWR 167
Query: 140 YRQ--------------------------LYASQVDGF--SLPDVEQQRSSEDS-----R 166
Y L++S+ + V RS++ S R
Sbjct: 168 YYHHNHMREQDSSQSRQSSPRINDPSGTLLFSSRTNSGEDGQAAVASSRSNQASLLMNRR 227
Query: 167 FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF 226
L+ + SL+ FFA+WFV+GNVW+F S + APNL+ LCI LA++ + Y+ PF
Sbjct: 228 MKTLVEYFKISLDCFFAVWFVVGNVWIFGGH-SSVEEAPNLYRLCIVFLAFSCIGYAMPF 286
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP--- 283
+L +CCC+P I S+LG +M + ++GA+ + I+ LP +++K N G+S
Sbjct: 287 ILCSTICCCLPCIISILGVREDM-SQNRGAASESINALPIYKFK-TKKNKRNGDSNSAAA 344
Query: 284 ---------------ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 328
+ ED CCICLAKY+ +E+R+LPCSH+FH CVD+WL+I + CP
Sbjct: 345 EGGVVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCP 404
Query: 329 LCKQEL 334
LCK ++
Sbjct: 405 LCKSDV 410
>gi|357134414|ref|XP_003568812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 419
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 107/301 (35%), Positives = 162/301 (53%), Gaps = 48/301 (15%)
Query: 81 PFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY 140
P NSS W+++EL+ + QI LS+S+ E P P+ W++GY +GC+ +L LLY RY
Sbjct: 93 PLNSSCWISVELIVTVSQIIAAISVLSLSRNEHPHAPLFEWVIGYTVGCIATLPLLYWRY 152
Query: 141 --------RQLYASQ-VDGFSLPDVEQQRSSEDSRFSHL--------------------- 170
Q ASQ S+P+ S SR S
Sbjct: 153 IHRNRLTTGQESASQNFPPNSIPEANSFTESSASRISEAGHVTGTNGVSQNNTITRNPRV 212
Query: 171 ---MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFL 227
+ R +L+ FFA+WFV+GNVW+F S APNL+ LCI+ L ++ + Y+ PF+
Sbjct: 213 QAYADHFRMALDCFFAVWFVVGNVWIFGGHSSSHD-APNLYRLCIAFLTFSCIGYAMPFI 271
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK----RVDSNLEAGNSAP 283
L L+CCC+P I S++ + ++ +KGA+ + I+ L ++++K R E G
Sbjct: 272 LCALICCCLPCIISLMSFREDLN-QNKGATAEAINALRTYKFKLKKARNGEGSEGGGILA 330
Query: 284 ANEDPE---------CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
A D E CCICLA+Y +++R+LPC+H FH +CVD+WL+I + CPLCK E+
Sbjct: 331 AGTDKERIVSAEDAVCCICLARYVNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAEI 390
Query: 335 E 335
+
Sbjct: 391 D 391
>gi|115462405|ref|NP_001054802.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|113578353|dbj|BAF16716.1| Os05g0179000 [Oryza sativa Japonica Group]
gi|215701280|dbj|BAG92704.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196198|gb|EEC78625.1| hypothetical protein OsI_18674 [Oryza sativa Indica Group]
gi|222630401|gb|EEE62533.1| hypothetical protein OsJ_17331 [Oryza sativa Japonica Group]
Length = 407
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 100/290 (34%), Positives = 160/290 (55%), Gaps = 37/290 (12%)
Query: 81 PFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY 140
P NS W+++EL+ + QI LS+S+ E P P+ W++GY +GC +L LY RY
Sbjct: 92 PLNSGCWISVELVVNVSQIIAAICVLSVSRNEHPHSPLFEWVIGYTVGCTATLPHLYWRY 151
Query: 141 ---------RQLYASQVDGFSLPDVE------------QQRSSEDSRFSHLMNKCRTSLE 179
++ + + P+ ++ + RF + + +L+
Sbjct: 152 LHRNLPTTGQEPTVQNIPPNNTPEANSYGVTGTNGVSRNNEATVNPRFQAFADHFKMALD 211
Query: 180 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLI 239
FFA+WFV+GNVWVF S APNL+ LCI+ L ++ + Y+ PF+L L+CCC+P I
Sbjct: 212 CFFAVWFVVGNVWVFGGH-SSAHDAPNLYRLCIAFLTFSCIGYAMPFILCALICCCLPCI 270
Query: 240 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGN-------SAPAN------- 285
S+LG+ ++ ++GAS + I+ L + ++K + GN +A N
Sbjct: 271 ISILGFREDLNQ-NRGASAETINALGTCKFKSKKTRDGDGNEVGVGVVAAGTNKERVISA 329
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
ED CCICLA+Y + +++R+LPC+H FH CVD+WL+I + CPLCK E++
Sbjct: 330 EDAVCCICLARYVDNDDLRELPCAHFFHKDCVDKWLKINALCPLCKAEID 379
>gi|22329099|ref|NP_194986.2| C3H4 type zinc finger protein [Arabidopsis thaliana]
gi|18377636|gb|AAL66968.1| unknown protein [Arabidopsis thaliana]
gi|19698907|gb|AAL91189.1| putative protein [Arabidopsis thaliana]
gi|20465641|gb|AAM20289.1| unknown protein [Arabidopsis thaliana]
gi|332660687|gb|AEE86087.1| C3H4 type zinc finger protein [Arabidopsis thaliana]
Length = 453
Score = 190 bits (483), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 160/303 (52%), Gaps = 52/303 (17%)
Query: 82 FNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY- 140
NS W+++EL + QI LS+SK E P P+ WIVGY GC+ +L LLY RY
Sbjct: 107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYY 166
Query: 141 RQLYASQVD---------------GFSLPDVEQ-------QRSSEDSRFSHLMNKCR--- 175
AS+ D FS+ + SS SR+ ++ R
Sbjct: 167 HSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKV 226
Query: 176 ------TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 229
+L+ FFA+WFV+GNVW+F S APNL+ LC+ L ++ + Y+ PF+L
Sbjct: 227 IVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFILC 285
Query: 230 LLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK------RVDSN-------- 275
+CCC+P I S+LGY ++ +GA+ + I+ LP+ ++K D N
Sbjct: 286 TTICCCLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGG 344
Query: 276 -LEAGNS---APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ AG A + ED CCICLAKY EE+R+LPCSH FH +CVD+WL+I + CPLCK
Sbjct: 345 VVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCK 404
Query: 332 QEL 334
E+
Sbjct: 405 SEV 407
>gi|357436799|ref|XP_003588675.1| RING finger protein [Medicago truncatula]
gi|355477723|gb|AES58926.1| RING finger protein [Medicago truncatula]
Length = 403
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 113/304 (37%), Positives = 170/304 (55%), Gaps = 51/304 (16%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P +S W+++EL+ L+ QI LS+S+ E P P+ WIVGY GC+ +L LL+ R
Sbjct: 84 SPVHSGLWISIELVLLVSQIVASIVVLSLSRNEHPQTPLFQWIVGYASGCVATLPLLFWR 143
Query: 140 Y------RQLYASQVDGFS----------------LPDVEQQR--SSEDSRFSHLMNK-- 173
Y R+ ++Q S D Q SS ++ S LMN+
Sbjct: 144 YYNHNHLREQDSAQSRQTSPRISDPSGTFLSISRNNGDAGQAAAASSRSNQTSILMNRRM 203
Query: 174 ------CRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFL 227
+ SL+ FFA+WFV+GNVW+F R S APNL+ LCI LA++ + Y+ PF+
Sbjct: 204 KILVEYFKISLDCFFAVWFVVGNVWIFGGR-SSAAVAPNLYRLCIVFLAFSCIGYAMPFI 262
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV---------DSNLEA 278
L +CCC+P I S+LG ++ + ++GA+ + I+ LP++++K +N++
Sbjct: 263 LCSTICCCLPCIISILGVREDL-SQNRGATSESINALPTYKFKMKKNKKNSENNSANIDG 321
Query: 279 GNSAPA--------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
G A ED CCICLAKY+ +E+R+LPCSH+FH CVD+WL+I + CPLC
Sbjct: 322 GTVAAGTEKERVISGEDAVCCICLAKYENNDELRELPCSHLFHKDCVDKWLKINALCPLC 381
Query: 331 KQEL 334
K E+
Sbjct: 382 KSEV 385
>gi|326517741|dbj|BAK03789.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 413
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 121/375 (32%), Positives = 188/375 (50%), Gaps = 67/375 (17%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAA--RAGAPSFLIRTAMRISRARWFNFLRRVFHYQN 71
+ST+ + T++ +RP+ R +P T+ +R +F RR Y
Sbjct: 20 TASTSTSHQDLHSDTDEPHQEDRPSTSTRTPSPQSSASTSPTAYSSRNLSFPRRDSFYGR 79
Query: 72 GSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLL 131
G+ + +NS W++ E + + QI+ L +S+ E P P+ WI+GY +GC
Sbjct: 80 GT------SLWNSGLWISFEFVMYVAQITAAIVILILSRHELPHAPLVAWIIGYTVGCTA 133
Query: 132 SLLLLYGRYRQ------------------LYASQVDGFSLPDVEQQRSSED--------- 164
SL L+Y RY L +S +G QR+S
Sbjct: 134 SLPLVYWRYVHRNRPSEEEPEQPPTTYPTLTSSSSEG------RNQRTSGSVLHLGCITI 187
Query: 165 --SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNAL 220
R S L +T+++ FFAIWFV+GNVW+F R S Q APN++ LC++ LA + +
Sbjct: 188 ACPRPSILAYHSKTAVDCFFAIWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSCV 247
Query: 221 SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS------ 274
Y+ PF++ +CCC P + SVL ++G + +GA+ + I LP++++K S
Sbjct: 248 GYAIPFIMCAAICCCFPCLISVLRLQEDLGQS-RGATQELIDALPTYKFKPKRSKNWVLD 306
Query: 275 ------NL-EAGNSAPAN--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
NL E G P ED CCICL KY + +E+R+LPC+H+FH++CVD+
Sbjct: 307 HASSSENLSEGGILGPGTKKERIVSAEDAVCCICLTKYGDDDELRELPCNHLFHVQCVDK 366
Query: 320 WLRILSCCPLCKQEL 334
WL+I + CPLCK E+
Sbjct: 367 WLKINAVCPLCKTEI 381
>gi|226500896|ref|NP_001146330.1| uncharacterized protein LOC100279906 [Zea mays]
gi|219886659|gb|ACL53704.1| unknown [Zea mays]
Length = 414
Score = 189 bits (481), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 183/359 (50%), Gaps = 57/359 (15%)
Query: 23 SSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPF 82
S P EDR++ + + + + TA R +F RR Y +G +P+
Sbjct: 34 SDEPHQEDRLSTSTQTLSSESSPSISPTAYS---TRNLSFPRRDSIYGHGR------SPW 84
Query: 83 NSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-- 140
NS W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY
Sbjct: 85 NSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVH 144
Query: 141 --RQL-YASQVDGFSLPDVEQQRSSED-------------------SRFSHLMNKCRTSL 178
R L Q + P + +SSE R S L +T +
Sbjct: 145 RNRHLDQEPQQPPTTYPTLIPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGV 204
Query: 179 ELFFAIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV 236
+ FFA+WFV+GNVW+F R S Q APN++ LC++ LA + + Y+ PF++ +CCC
Sbjct: 205 DCFFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCAAICCCF 264
Query: 237 PLISSVLGYNMNMGAADKGASDDQISRLPSWRYK--RV-----------DSNLEAGNSAP 283
P + SVL ++G ++GA+ + I LP++++K RV + E G P
Sbjct: 265 PCLISVLRLQEDLGQ-NRGATQELIDALPTYKFKPKRVKNWGIDHASSSEHLDEGGILGP 323
Query: 284 AN--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 324 GTKKERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|3063710|emb|CAA18601.1| putative protein [Arabidopsis thaliana]
gi|7270164|emb|CAB79977.1| putative protein [Arabidopsis thaliana]
Length = 495
Score = 189 bits (480), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 113/303 (37%), Positives = 160/303 (52%), Gaps = 52/303 (17%)
Query: 82 FNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY- 140
NS W+++EL + QI LS+SK E P P+ WIVGY GC+ +L LLY RY
Sbjct: 107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYY 166
Query: 141 RQLYASQVD---------------GFSLPDVEQ-------QRSSEDSRFSHLMNKCR--- 175
AS+ D FS+ + SS SR+ ++ R
Sbjct: 167 HSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEADGRQTNTTSSRGSRYPGFISAARLKV 226
Query: 176 ------TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 229
+L+ FFA+WFV+GNVW+F S APNL+ LC+ L ++ + Y+ PF+L
Sbjct: 227 IVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFILC 285
Query: 230 LLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK------RVDSN-------- 275
+CCC+P I S+LGY ++ +GA+ + I+ LP+ ++K D N
Sbjct: 286 TTICCCLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSNGDDNGSSTSEGG 344
Query: 276 -LEAGNS---APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ AG A + ED CCICLAKY EE+R+LPCSH FH +CVD+WL+I + CPLCK
Sbjct: 345 VVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCK 404
Query: 332 QEL 334
E+
Sbjct: 405 SEV 407
>gi|356555922|ref|XP_003546278.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 424
Score = 189 bits (479), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/326 (34%), Positives = 169/326 (51%), Gaps = 61/326 (18%)
Query: 63 LRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWI 122
LRR Y + RS P NS W+++EL+ + QI LS+S+ E+P P+ WI
Sbjct: 91 LRRGEGYGHHGRS-----PLNSGLWISVELVVTVSQIIASIVVLSLSRNENPQAPLFAWI 145
Query: 123 VGYDIGCLLSLLLLYGRYRQLYASQ-----------------------VDGFSLPDVEQQ 159
VGY GC+ +L +LY R+R S + + D E
Sbjct: 146 VGYASGCVATLPILYWRFRNRNQSNEQDTSQASQGSSGSNPPDRSYNSIHVSHVSDEENG 205
Query: 160 RSSED------------SRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
++ SR + L++ + +L+ FFA+WFV+GNVW+F S AP L
Sbjct: 206 HATRSASRNTIMPGAFTSRLNGLVDHFKMALDCFFAVWFVVGNVWIFGGHT-SPSDAPQL 264
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSW 267
+ LCI L ++ + Y+ PF+L +CCC+P I SVLG + + ++GA+ + I+ LP +
Sbjct: 265 YRLCIVFLTFSCIGYAMPFILCATICCCLPCIISVLGIREDF-SQNRGATVESINALPIF 323
Query: 268 RYK----------RVDSNLEAGNSAPAN---------EDPECCICLAKYKEKEEVRKLPC 308
++K V++ ++ G A ED CCICLAKY + +E+R+LPC
Sbjct: 324 KFKLKNNENGDDQDVNAAIDEGGILAAGTEKERMISGEDAVCCICLAKYADDDELRELPC 383
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
SH FH+ CVD+WL+I + CPLCK E+
Sbjct: 384 SHFFHVMCVDKWLKINATCPLCKNEV 409
>gi|297842825|ref|XP_002889294.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297335135|gb|EFH65553.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 401
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 102/324 (31%), Positives = 165/324 (50%), Gaps = 55/324 (16%)
Query: 64 RRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIV 123
+R +N R+ +P NS W+++EL+ + QI + ++K E P P+ W++
Sbjct: 72 QRPTSSRNARRTTSTRSPLNSGLWISVELVVTVAQIVAAIVVMVLAKDEHPEAPLFTWVI 131
Query: 124 GYDIGCLLSLLLLYGRYRQLY--------------------ASQVDGFSLPDVEQQRSSE 163
GY GC+ +L +LY R+R S+ ++ V Q E
Sbjct: 132 GYTSGCIATLPILYWRFRTYSRGTGQDSSQRLSSSSQANNNPSESTPYTAVSVAQAADEE 191
Query: 164 DS------------------RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 205
+S R + L++ + +++ FFA+WFV+GNVW+F S +P
Sbjct: 192 NSTDMSAAPRNNQVGETLRTRLNGLVDHFKMAIDCFFAVWFVVGNVWIFGGH-SSPSDSP 250
Query: 206 NLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 265
L+ LCI+ L ++ + Y+ PF+L +CCC+P + SVLG+ N + +GA+ + I+ LP
Sbjct: 251 KLYRLCIAFLTFSCIGYAMPFILCATICCCLPCLISVLGFRENF-SQTRGATTEAINALP 309
Query: 266 SWRYKRVDSN----LEAGNSA-----------PANEDPECCICLAKYKEKEEVRKLPCSH 310
+R+K N E G + ED CCICL +Y + +VR+LPCSH
Sbjct: 310 VYRFKSKSRNDLEFSEEGEGGFLLLGSQKKRLISGEDASCCICLTRYGDDVQVRELPCSH 369
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ CVD+WL+I + CPLCK E+
Sbjct: 370 VFHVDCVDKWLKINATCPLCKNEV 393
>gi|297802754|ref|XP_002869261.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
gi|297315097|gb|EFH45520.1| hypothetical protein ARALYDRAFT_328473 [Arabidopsis lyrata subsp.
lyrata]
Length = 489
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/303 (36%), Positives = 158/303 (52%), Gaps = 52/303 (17%)
Query: 82 FNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY- 140
NS W+++EL + QI LS+SK E P P+ WIVGY GC+ +L LLY RY
Sbjct: 107 LNSGLWISIELFLTVGQIIAAIVVLSLSKHEHPRAPLFTWIVGYACGCVATLPLLYWRYY 166
Query: 141 RQLYASQVD---------------GFSLPDVEQ-------QRSSEDSRFSHLMNKCR--- 175
AS+ D FS+ + SS SR+ ++ R
Sbjct: 167 HSNQASEQDSGQHRPNLNVAAGPFAFSISRTSEGDGRQTNTTSSRVSRYPGFISAARLKV 226
Query: 176 ------TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 229
+L+ FFA+WFV+GNVW+F S APNL+ LC+ L ++ + Y+ PF+L
Sbjct: 227 IVEYFKMALDCFFAVWFVVGNVWIFGGH-SSAAEAPNLYRLCLVFLTFSCIGYAMPFILC 285
Query: 230 LLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK----------RVDSNLEAG 279
+CCC+P I S+LGY ++ +GA+ + I+ LP+ ++K S E G
Sbjct: 286 TTICCCLPCIISILGYREDL-TQPRGATPESINALPTHKFKLKKSRSSGDDNGSSTSEGG 344
Query: 280 --------NSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
A + ED CCICLAKY EE+R+LPCSH FH +CVD+WL+I + CPLCK
Sbjct: 345 VVAAGTDNERAISGEDAVCCICLAKYANNEELRELPCSHFFHKECVDKWLKINASCPLCK 404
Query: 332 QEL 334
E+
Sbjct: 405 SEV 407
>gi|242056191|ref|XP_002457241.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
gi|241929216|gb|EES02361.1| hypothetical protein SORBIDRAFT_03g003920 [Sorghum bicolor]
Length = 408
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/317 (34%), Positives = 169/317 (53%), Gaps = 52/317 (16%)
Query: 68 HYQNGSRSDLG---SNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVG 124
H + +R D G NP NS W+++EL+ L QI LS+S+ E P P+ W++G
Sbjct: 65 HNASSARIDRGHRQQNPLNSGFWISIELIVNLSQIVAAIAVLSVSRNEHPHAPLFTWLLG 124
Query: 125 YDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS------- 177
Y IGC+ L LY RY ++ P +R+ ++ ++ RTS
Sbjct: 125 YTIGCIAILPHLYWRYLHRNRPNMEQEMTPQSLSERNMSETNSYAAVSSPRTSEAVDGTN 184
Query: 178 --------------------------LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLC 211
L+ FFA+WFV+GNVW+F SR S APNL+ +C
Sbjct: 185 STGVSRMNLPLASPRFYAMVACFKLMLDCFFAVWFVVGNVWIFGSR-SSAHDAPNLYRIC 243
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY-- 269
I LA+ + Y+ PF+L ++CCC+P I S+LG + ++ ++GA+ + I+ L ++++
Sbjct: 244 IVFLAFGFIVYALPFILCTMICCCLPCIISILGVHEDLDL-NRGATTEAINTLVAYKFQS 302
Query: 270 KRVDSN---------LEAGNSAP---ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
KRV L AG + ED CCICL+K+ E++R+LPC+H+FH++C+
Sbjct: 303 KRVHDGDVGEDGGGVLAAGTDKERIISAEDAICCICLSKFSNNEDLRELPCAHVFHMECI 362
Query: 318 DQWLRILSCCPLCKQEL 334
D+WL+I + CPLCK E+
Sbjct: 363 DKWLQINALCPLCKAEI 379
>gi|326505380|dbj|BAJ95361.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 420
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/302 (35%), Positives = 165/302 (54%), Gaps = 49/302 (16%)
Query: 81 PFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY 140
P NSS W+++EL+ + QI LS+S+KE P P+ W++GY +GC+ +L LLY RY
Sbjct: 93 PLNSSCWISIELVVTVSQIIAAICVLSLSRKEHPHSPLFEWVIGYTVGCVATLPLLYWRY 152
Query: 141 --------RQLYASQ-VDGFSLPDVEQQRSSE------------------------DSRF 167
Q ASQ S+P+ +S + R
Sbjct: 153 LHRNRPTTGQEPASQNFPPNSIPESNSHTTSSAPGMSEAGFVTETNGVSQNNMLTRNPRA 212
Query: 168 SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFL 227
+ R +L+ FFA+WFV+GNVWVF S APNL+ LCI+ L ++ + Y+ PF+
Sbjct: 213 QVYADHFRMALDCFFAVWFVVGNVWVFGGH-SSAHDAPNLYRLCIAFLTFSCIGYAMPFI 271
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-----------L 276
L L+CCC+P I S++ + ++ +KGAS + I+ L ++++K S +
Sbjct: 272 LCALICCCLPCIISLMSFREDLNQ-NKGASAEAINALRTYKFKTKKSRNGEGIEVGGGVV 330
Query: 277 EAGNSAP---ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 333
AG + + ED CCICLA+Y +++R+LPC+H FH +CVD+WL+I + CPLCK E
Sbjct: 331 AAGTNKERIVSAEDAVCCICLARYSNNDDLRELPCTHFFHKECVDKWLKINALCPLCKAE 390
Query: 334 LE 335
++
Sbjct: 391 ID 392
>gi|115434872|ref|NP_001042194.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|55296113|dbj|BAD67832.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|55296253|dbj|BAD67994.1| ATP synthetase alpha chain -like [Oryza sativa Japonica Group]
gi|113531725|dbj|BAF04108.1| Os01g0178700 [Oryza sativa Japonica Group]
gi|215736990|dbj|BAG95919.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187619|gb|EEC70046.1| hypothetical protein OsI_00636 [Oryza sativa Indica Group]
gi|222617849|gb|EEE53981.1| hypothetical protein OsJ_00605 [Oryza sativa Japonica Group]
Length = 405
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 107/310 (34%), Positives = 165/310 (53%), Gaps = 52/310 (16%)
Query: 73 SRSDLGS---NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGC 129
+R D G NP NS W+++EL+ L QI LS+S+ E P P+ W++GY IGC
Sbjct: 70 ARRDQGHRQPNPLNSGFWISIELIVSLSQIIAAITVLSVSRNEHPHAPLAQWLIGYTIGC 129
Query: 130 LLSLLLLYGRYRQLYASQVDGFSLPDVEQQR---------------SSE--DS------- 165
+ +L LY R+ + S V +R SE DS
Sbjct: 130 VATLPHLYWRFLHRNRQNTEQESTNQVSSERDVYEPNSYVVVSSAHGSEVVDSGNNGGVA 189
Query: 166 -----RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNAL 220
R L+ + +L+ FFA+WFV+GNVW+F R S APNL+ LCI LA+ +
Sbjct: 190 RIASPRVYALVACFKLALDCFFAVWFVVGNVWIFGGRT-SLHDAPNLYRLCIVFLAFGFI 248
Query: 221 SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGN 280
Y+ PF+L ++CCC+P I S++G + ++ ++GA+ + I L +++++ + G
Sbjct: 249 GYALPFILCTMICCCLPCIISMMGIHEDLDF-NRGATAEAIDALVAYKFQS--KKFQDGE 305
Query: 281 SAPAN----------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRIL 324
+ N ED CCICL+K+ E++R+LPC+H+FHL+CVD+WL+I
Sbjct: 306 AGEDNGGVLAAGTDKERTISAEDAVCCICLSKFSNNEDLRELPCNHVFHLECVDKWLKIN 365
Query: 325 SCCPLCKQEL 334
+ CPLCK +L
Sbjct: 366 ALCPLCKADL 375
>gi|414885026|tpg|DAA61040.1| TPA: putative RING zinc finger domain superfamily protein isoform 1
[Zea mays]
gi|414885027|tpg|DAA61041.1| TPA: putative RING zinc finger domain superfamily protein isoform 2
[Zea mays]
Length = 414
Score = 186 bits (472), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 119/359 (33%), Positives = 183/359 (50%), Gaps = 57/359 (15%)
Query: 23 SSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPF 82
S P EDR++ + + + + TA R +F RR Y +G +P+
Sbjct: 34 SDEPHQEDRLSTSTQTLSSESSPSISPTAYS---TRNLSFPRRDSIYGHGR------SPW 84
Query: 83 NSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-- 140
NS W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY
Sbjct: 85 NSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVH 144
Query: 141 --RQL-YASQVDGFSLPDVEQQRSSEDS-------------------RFSHLMNKCRTSL 178
R L Q + P + +SSE R S L +T +
Sbjct: 145 RNRHLDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGV 204
Query: 179 ELFFAIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV 236
+ FFA+WFV+GNVW+F R S Q APN++ LC++ LA + + Y+ PF++ +CCC
Sbjct: 205 DCFFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCAAICCCF 264
Query: 237 PLISSVLGYNMNMGAADKGASDDQISRLPSWRYK--RV-----------DSNLEAGNSAP 283
P + SVL ++G ++GA+ + I LP++++K RV + E G P
Sbjct: 265 PCLISVLRLQEDLGQ-NRGATQELIDALPTYKFKPKRVKNWGIDHASSSEHLDEGGILGP 323
Query: 284 AN--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 324 GTKKERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|242048934|ref|XP_002462211.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
gi|241925588|gb|EER98732.1| hypothetical protein SORBIDRAFT_02g021790 [Sorghum bicolor]
Length = 415
Score = 186 bits (471), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/304 (34%), Positives = 164/304 (53%), Gaps = 48/304 (15%)
Query: 78 GSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLY 137
G +P+NS W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y
Sbjct: 81 GRSPWNSGLWISFEVVMYIAQVVAAIVILVFSRHEHPHAPLFAWIIGYTVGCIASLPLIY 140
Query: 138 GRY----RQL-YASQVDGFSLPDVEQQRSSEDS-------------------RFSHLMNK 173
RY R L Q + P + +SSE R S L
Sbjct: 141 WRYVHRNRHLDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLRLGCIAISCPRLSVLAYH 200
Query: 174 CRTSLELFFAIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYSFPFLLFLL 231
+T+++ FFA+WFV+GNVW+F R S Q APN++ LC++ LA + + Y+ PF++
Sbjct: 201 FKTAVDCFFAVWFVVGNVWIFGGRSISSDAQDAPNMYRLCLAFLALSCVGYAIPFIMCAA 260
Query: 232 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK-RVDSNL------------EA 278
+CCC P + SVL ++G ++GA+ + I LP++++K + + N E
Sbjct: 261 ICCCFPCLISVLRLQEDLGQ-NRGATQELIDALPTYKFKPKRNKNWGIDHASSSEHLDEG 319
Query: 279 GNSAPAN--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
G P ED CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLC
Sbjct: 320 GILGPGTKKERVVSAEDAVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLC 379
Query: 331 KQEL 334
K E+
Sbjct: 380 KTEI 383
>gi|302756339|ref|XP_002961593.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
gi|300170252|gb|EFJ36853.1| hypothetical protein SELMODRAFT_76977 [Selaginella moellendorffii]
Length = 403
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 106/314 (33%), Positives = 163/314 (51%), Gaps = 61/314 (19%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL + QI LS+S+ E P P+ +W+ GY GCL +L LLY R
Sbjct: 71 SPLNSGLWISIELTITVSQIVASIIVLSLSRDEKPQAPLSVWVAGYAAGCLATLPLLYWR 130
Query: 140 YRQLYA-------------SQVDGFSLP------------------DVEQQRSSEDSR-- 166
Y S SLP +V + R+ R
Sbjct: 131 YTHRNGTTQAHDQHESPSQSTPSAESLPPSPRGTSYVALNIPSASTEVVEPRARSRGRDV 190
Query: 167 -----FSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALS 221
S L+ K + +L+ FFA+WFV+GNVW+F S + APNL+ LCI L ++ +
Sbjct: 191 DSASDNSGLVEKFKIALDCFFAVWFVVGNVWIFGGHSSS-REAPNLYRLCIVFLTFSCIG 249
Query: 222 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR---------V 272
Y+ PF+L +CCC+P I ++LG+ A ++GAS + I+ LP++++K
Sbjct: 250 YAMPFILCATICCCLPCIIALLGFREEQ-AQNRGASAEVIAALPTYKFKSRPSSESKDGS 308
Query: 273 DSNLEAGNS------------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+S+ E N A + +D CCICLA+Y++ E +R+L C+H FH+ CVD+W
Sbjct: 309 ESDSEGSNEGGFVAAGTDKERAVSADDAVCCICLARYRDGEPLRELSCTHHFHVDCVDKW 368
Query: 321 LRILSCCPLCKQEL 334
L+I + CPLCK ++
Sbjct: 369 LKINASCPLCKLDV 382
>gi|222641326|gb|EEE69458.1| hypothetical protein OsJ_28860 [Oryza sativa Japonica Group]
Length = 616
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 114/347 (32%), Positives = 177/347 (51%), Gaps = 53/347 (15%)
Query: 34 RNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELL 93
R + + +P T+ R +F RR Y +G RS +NS W++ EL+
Sbjct: 219 RPSTSTQTPSPQSSASTSPTAYNTRNLSFPRRDSMYGHG-RSI-----WNSGLWISFELV 272
Query: 94 ALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR--YRQLYASQ---V 148
+VQI F L S+ E P P+ WI+GY IGC+ S+ L+ R +R + Q
Sbjct: 273 IYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQ 332
Query: 149 DGFSLPDVEQQRSSED-------------------SRFSHLMNKCRTSLELFFAIWFVMG 189
+ P++ +SSE R S L +T+++ FFA+WFV+G
Sbjct: 333 PPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVG 392
Query: 190 NVWVFD--SRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNM 247
NVW+F S Q APN++ LC++ LA + + Y+ PF++ +CCC P + S+L
Sbjct: 393 NVWIFGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLISLLRLQE 452
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNL------------EAGNSAPAN--------ED 287
++G +GA+ + I LP++++K S + E G P ED
Sbjct: 453 DLGHT-RGATQELIDALPTYKFKPKRSKMWVDHASSSENLSEGGILGPGTKKERIVSAED 511
Query: 288 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 512 AVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 558
>gi|115478553|ref|NP_001062870.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|48716984|dbj|BAD23676.1| putative RING zinc finger protein [Oryza sativa Japonica Group]
gi|113631103|dbj|BAF24784.1| Os09g0323100 [Oryza sativa Japonica Group]
gi|215767689|dbj|BAG99917.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201929|gb|EEC84356.1| hypothetical protein OsI_30879 [Oryza sativa Indica Group]
gi|347737076|gb|AEP20519.1| zinc finger protein [Oryza sativa Japonica Group]
Length = 414
Score = 184 bits (468), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 112/347 (32%), Positives = 176/347 (50%), Gaps = 53/347 (15%)
Query: 34 RNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELL 93
R + + +P T+ R +F RR Y +G + +NS W++ EL+
Sbjct: 43 RPSTSTQTPSPQSSASTSPTAYNTRNLSFPRRDSMYGHGR------SIWNSGLWISFELV 96
Query: 94 ALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR--YRQLYASQVDG- 150
+VQI F L S+ E P P+ WI+GY IGC+ S+ L+ R +R + Q
Sbjct: 97 IYVVQIVAAIFVLVFSRDEHPHAPLFAWIIGYTIGCIASIPLICWRCAHRNRPSEQEPEQ 156
Query: 151 --FSLPDVEQQRSSED-------------------SRFSHLMNKCRTSLELFFAIWFVMG 189
+ P++ +SSE R S L +T+++ FFA+WFV+G
Sbjct: 157 PPAAYPNLTSSQSSEGRNQRSSGTVLHFGCITISCPRPSILAYHFKTAVDCFFAVWFVVG 216
Query: 190 NVWVFD--SRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNM 247
NVW+F S Q APN++ LC++ LA + + Y+ PF++ +CCC P + S+L
Sbjct: 217 NVWIFGGHSTLSDSQEAPNMYRLCLAFLALSCVGYAIPFVMCAAICCCFPCLISLLRLQE 276
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNL------------EAGNSAPAN--------ED 287
++G +GA+ + I LP++++K S + E G P ED
Sbjct: 277 DLGHT-RGATQELIDALPTYKFKPKRSKMWVDHASSSENLSEGGILGPGTKKERIVSAED 335
Query: 288 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 336 AVCCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 382
>gi|356518268|ref|XP_003527801.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 386
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 113/300 (37%), Positives = 164/300 (54%), Gaps = 47/300 (15%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+ +EL+ + QI LS+SK E P P+ WIVG+ GC+ +L LLY R
Sbjct: 58 SPLNSGLWICVELVITVSQIVASVVVLSLSKHEHPRAPLFAWIVGFASGCVATLPLLYWR 117
Query: 140 Y------RQLYASQV--------DGFSLPDVEQQ---------RSSEDS-----RFSHLM 171
Y R+L +S G L D RS+++S R L+
Sbjct: 118 YYHNCLVRELESSSQASLRSNDPSGTLLSDSTTNGGEDVPASSRSNQESWLMNARLKLLV 177
Query: 172 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL 231
+ +++ FFAIWF++GNVW+F S +APNL+ LC+ L ++ + Y+ PF+L
Sbjct: 178 EYFKIAVDCFFAIWFIVGNVWIFGGH-SSADQAPNLYRLCVVFLTFSCIGYAMPFILCAT 236
Query: 232 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV------DSNL---EAGNSA 282
+CCC+P I S+LG +M A GAS + I+ LP++++K +SN E G A
Sbjct: 237 ICCCLPCIISILGVREDM-AQTPGASSESINSLPTYKFKMKKNKSKGESNSAVSEGGVVA 295
Query: 283 PA--------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED CCICLAKY+ +E+R+L CSH+FH CVD+WL+I + CPLCK E+
Sbjct: 296 SGTEKERMISGEDAACCICLAKYENNDELRELLCSHLFHKDCVDKWLKINALCPLCKSEV 355
>gi|168025496|ref|XP_001765270.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683589|gb|EDQ69998.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 300
Score = 184 bits (466), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/296 (33%), Positives = 152/296 (51%), Gaps = 43/296 (14%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL + QI L +S+ E P P+ +W+ GY GCL +L LLY R
Sbjct: 5 SPLNSGLWVSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWR 64
Query: 140 YRQLYASQVDGFSL---------------------PDVEQQRSSEDSRFSHLMNKCRTSL 178
Y Y + S P + + S + + +L
Sbjct: 65 YTHQYMRTREPASTSASEPNPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIAL 124
Query: 179 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL 238
+ FFAIWFV+GNVW+F + APNL+ LCI LL ++ + Y+ PF+L +CCC+P
Sbjct: 125 DCFFAIWFVVGNVWIFGGHSAA-HDAPNLYRLCIVLLTFSCIGYAMPFILCATICCCLPC 183
Query: 239 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE--------- 289
I ++LG+ + +GAS + I+ LP++++K SN N + D E
Sbjct: 184 IIALLGFREDQNQP-RGASQEAIAALPTYKFKAKASNESKLNKDGNDSDSEGAWVAAGTE 242
Query: 290 -----------CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
CCICL KYK+ E+R+L C+H FH++CVD+WL+I + CPLCK ++
Sbjct: 243 KERWVSADDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCKYDI 298
>gi|225445348|ref|XP_002281595.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 427
Score = 183 bits (465), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 162/312 (51%), Gaps = 62/312 (19%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+PFNS W+++E++ I LS+S+ E P P+ W+VGY GC SL +L+ R
Sbjct: 104 SPFNSGLWISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWR 163
Query: 140 YRQLYASQVDGFS-------------------------------LPDVE------QQRSS 162
Y + G + LPD +
Sbjct: 164 YLRRNHDGEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGA 223
Query: 163 EDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY 222
++R S L + + +L+ FFA+WFV+GNVW+F SF APNL+ LCI L ++ + Y
Sbjct: 224 SNARLSVLADYYKMALDCFFAVWFVVGNVWIFGGH-SSFTAAPNLYRLCIVFLTFSCIGY 282
Query: 223 SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNS- 281
+ PF+L ++CCC+P I S+LG+ ++ +GAS + I+ LP++++K + +GNS
Sbjct: 283 AMPFILCAMICCCLPCIISILGHG-DLSQV-RGASAESINALPTYKFKLKKNG--SGNSG 338
Query: 282 -------------------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR 322
A + ED CCICL +Y + +E+R+LPCSH FH +CVD+WL+
Sbjct: 339 EISSGVEGGVVGAGTEKERAISGEDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLK 398
Query: 323 ILSCCPLCKQEL 334
I + CPLCK E+
Sbjct: 399 INASCPLCKCEV 410
>gi|297738877|emb|CBI28122.3| unnamed protein product [Vitis vinifera]
Length = 407
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/312 (33%), Positives = 162/312 (51%), Gaps = 62/312 (19%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+PFNS W+++E++ I LS+S+ E P P+ W+VGY GC SL +L+ R
Sbjct: 84 SPFNSGLWISIEIVFTTSLIVASIVVLSLSRDEKPQTPLFAWVVGYAAGCAASLPILFWR 143
Query: 140 YRQLYASQVDGFS-------------------------------LPDVE------QQRSS 162
Y + G + LPD +
Sbjct: 144 YLRRNHDGEQGLNHMLQGSSQGSTTLESNSYITISLTRSAAEENLPDASTNTWNGHTMGA 203
Query: 163 EDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY 222
++R S L + + +L+ FFA+WFV+GNVW+F SF APNL+ LCI L ++ + Y
Sbjct: 204 SNARLSVLADYYKMALDCFFAVWFVVGNVWIFGGH-SSFTAAPNLYRLCIVFLTFSCIGY 262
Query: 223 SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNS- 281
+ PF+L ++CCC+P I S+LG+ ++ +GAS + I+ LP++++K + +GNS
Sbjct: 263 AMPFILCAMICCCLPCIISILGHG-DLSQV-RGASAESINALPTYKFKLKKNG--SGNSG 318
Query: 282 -------------------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR 322
A + ED CCICL +Y + +E+R+LPCSH FH +CVD+WL+
Sbjct: 319 EISSGVEGGVVGAGTEKERAISGEDAVCCICLTRYADDDELRELPCSHFFHSECVDKWLK 378
Query: 323 ILSCCPLCKQEL 334
I + CPLCK E+
Sbjct: 379 INASCPLCKCEV 390
>gi|242087091|ref|XP_002439378.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
gi|241944663|gb|EES17808.1| hypothetical protein SORBIDRAFT_09g005450 [Sorghum bicolor]
Length = 410
Score = 183 bits (464), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/300 (33%), Positives = 156/300 (52%), Gaps = 48/300 (16%)
Query: 82 FNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYR 141
NS W+++EL L QI LS+S+ E P P+ W++GY IGC+ +L LY RY
Sbjct: 84 LNSGFWISIELAVNLSQIIAAICVLSVSRNEHPHAPLFEWVIGYTIGCIATLPHLYWRYL 143
Query: 142 Q-------------------LYASQVDGFSLPDVEQ-------------QRSSEDSRFSH 169
Q ++ G S P V + + + R
Sbjct: 144 QRNQLPTVQGSNQNYVPDNSFESNSFTGISPPHVSEAGVVTVTNGVSRNNTVTTNPRAQA 203
Query: 170 LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 229
+ + +L+ FFA+WFV+GNVWVF S APNL+ LCI+ L ++ + Y+ PF+L
Sbjct: 204 FADHFKMALDCFFAVWFVVGNVWVFGGHSSS-HDAPNLYRLCIAFLTFSCIGYAMPFILC 262
Query: 230 LLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR--------------VDSN 275
L+CCC+P I S++G+ ++ ++GA+ D I+ L ++++K V +
Sbjct: 263 ALICCCLPCIISLMGFREDLNE-NRGATSDAINALGTYKFKTKKPRNTEGNEGGGGVFAP 321
Query: 276 LEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
A + ED CCICLA+Y + +++R LPC H FH CVD+WL+I + CPLCK E++
Sbjct: 322 GTDKERAVSAEDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEID 381
>gi|212723166|ref|NP_001132232.1| uncharacterized LOC100193667 [Zea mays]
gi|195643062|gb|ACG40999.1| protein binding protein [Zea mays]
gi|413944656|gb|AFW77305.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413944657|gb|AFW77306.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
gi|413944658|gb|AFW77307.1| putative RING zinc finger domain superfamily protein isoform 3 [Zea
mays]
Length = 412
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/300 (34%), Positives = 158/300 (52%), Gaps = 48/300 (16%)
Query: 82 FNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYR 141
NS W+++EL L QI LS+SK E P P+ W++GY IGC+ +L LY RY
Sbjct: 84 LNSGFWISIELAVNLSQIIAAICVLSVSKNEHPHAPLFEWVIGYTIGCIATLPHLYWRYL 143
Query: 142 Q-------------------LYASQVDGFSLPDVEQQ----------RSS---EDSRFSH 169
Q +S G S P V + R++ + R
Sbjct: 144 QRNQLATVQGSNQNYVPDNSFESSSFTGISPPPVSEAGVVTVSNGVLRNNVVITNPRAQA 203
Query: 170 LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 229
+ + +L+ FFA+WFV+GNVWVF S APNL+ LCI+ L ++ + Y+ PF+L
Sbjct: 204 FADHFKMALDCFFAVWFVVGNVWVFGGH-SSAHDAPNLYRLCIAFLTFSCIGYAMPFILC 262
Query: 230 LLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR--------------VDSN 275
L+CCC+P I S++G+ ++ ++GA+ D I+ L ++R++ V +
Sbjct: 263 ALICCCLPCIISLMGFREDLDE-NRGATSDAINALGTYRFRSKKPRNGEANEGGGGVFAP 321
Query: 276 LEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
A + ED CCICLA+Y + +++R LPC H FH CVD+WL+I + CPLCK E++
Sbjct: 322 GTDKERAVSAEDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPLCKAEID 381
>gi|168025500|ref|XP_001765272.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683591|gb|EDQ70000.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 182 bits (462), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/300 (34%), Positives = 153/300 (51%), Gaps = 47/300 (15%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL + QI L +S+ E P P+ +W+ GY GCL +L LLY R
Sbjct: 5 SPLNSGLWVSIELTITISQIIASIIVLVLSRNEHPQAPLHVWVAGYAAGCLATLPLLYWR 64
Query: 140 YRQLYASQVDGFSL---------------------PDVEQQRSSEDSRFSHLMNKCRTSL 178
Y Y + S P + + S + + +L
Sbjct: 65 YTHQYMRTREPASTSASEPNPSSGGVGGSSYVTLTPGSRDDMAHGSRQRSGVGQVFKIAL 124
Query: 179 ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL 238
+ FFAIWFV+GNVW+F + APNL+ LCI LL ++ + Y+ PF+L +CCC+P
Sbjct: 125 DCFFAIWFVVGNVWIFGGHSAA-HDAPNLYRLCIVLLTFSCIGYAMPFILCATICCCLPC 183
Query: 239 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL----------------EAGNSA 282
I ++LG+ + +GAS + I+ LP++++K SN E G A
Sbjct: 184 IIALLGFREDQNQP-RGASQEAIAALPTYKFKAKASNESKLNKDGNDSDSEGAGEGGWVA 242
Query: 283 PANE--------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
E D CCICL KYK+ E+R+L C+H FH++CVD+WL+I + CPLCK ++
Sbjct: 243 AGTEKERWVSADDAVCCICLGKYKDGVELRELVCTHHFHVECVDKWLKINASCPLCKYDI 302
>gi|293336813|ref|NP_001170128.1| uncharacterized LOC100384053 [Zea mays]
gi|224033719|gb|ACN35935.1| unknown [Zea mays]
gi|414876051|tpg|DAA53182.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 410
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 111/317 (35%), Positives = 175/317 (55%), Gaps = 52/317 (16%)
Query: 68 HYQNGSRSDLG---SNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVG 124
H + +R D G NP NS W+++EL+ L QI LS+S+ E P P+ W++G
Sbjct: 65 HNASSARIDRGHRQQNPLNSGFWISIELIVNLSQIVAAVVVLSVSRNEHPQAPLFTWLLG 124
Query: 125 YDIGCLLSLLLLYGRYRQ-----------------LYASQVDGFSL-------PDVEQQR 160
Y IGC+ L LY RY + S+++ +++ VE
Sbjct: 125 YTIGCIAILPHLYWRYLHRNRLDMEQEMPPQRSPGMNISEINSYAVVSSPHASEAVEGAN 184
Query: 161 SSEDSRFS--------HLMNKC-RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLC 211
S+ SR + + M C + L+ FFA+WFV+GNVW+F SR S APNL+ +C
Sbjct: 185 STGVSRTNLPMASPRFYAMVACFKLVLDCFFAVWFVVGNVWMFGSR-SSAHDAPNLYRIC 243
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY-- 269
+ LA+ + Y+ PF+L ++CCC+P I SVLG + ++ ++GA+ + I+ L ++++
Sbjct: 244 LVFLAFGFIGYALPFILCTMICCCLPCIISVLGVHEDLD-MNRGATTEAINTLVAYKFQS 302
Query: 270 KRVD---------SNLEAGNSAP---ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
KRV L AG + ED CCICL+K+ E++R+LPC+H+FH++C+
Sbjct: 303 KRVHDGDVGGDGGGVLAAGTDKERTISAEDAICCICLSKFSNNEDLRELPCAHVFHMECI 362
Query: 318 DQWLRILSCCPLCKQEL 334
D+WL+I + CPLCK E+
Sbjct: 363 DKWLQINALCPLCKAEI 379
>gi|296434051|dbj|BAJ07983.1| RING finger family protein [Silene latifolia]
Length = 434
Score = 181 bits (458), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 108/323 (33%), Positives = 163/323 (50%), Gaps = 69/323 (21%)
Query: 81 PFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY 140
PFNS W+++EL L QI T L +S+ E P P+ W+VGY GC+ SL ++Y R+
Sbjct: 100 PFNSGFWISIELAFTLTQIIASTIVLCLSRHEHPQAPLFAWVVGYTAGCVASLPVMYWRF 159
Query: 141 -------------------------RQLYAS--------QVDGFSLPDVEQQRSSEDSRF 167
+ Y + D S+P + + ++R
Sbjct: 160 IHRNRGSEAVVQVNQASPHANSASDQNSYVTISLSRSLEHEDRQSVPSSSNEGLTANTRM 219
Query: 168 SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLH----------------VLC 211
+M+ +T+L+ FF + FV+GNVW+F S APNL+ LC
Sbjct: 220 GLIMDHFKTALDCFFGVLFVVGNVWIFGGH-ASVSDAPNLYRYFLNPDVKTLQISFESLC 278
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR 271
I L + ++Y+ PF+L ++CCC+P I SVLG ++ +GAS++ I+ LP++++K
Sbjct: 279 IVYLTLSCINYAMPFILCAMICCCLPCIISVLGIREDLNQV-RGASEESINTLPTYKFKV 337
Query: 272 VDS--------NLEAGNSAP---------ANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
+ N E G + ED CCICLA+Y E +E+R+LPC+H FH
Sbjct: 338 TNDENGCTGQRNSEEGGIVAIGTEKERVISGEDAVCCICLARYLEDDEMRELPCAHFFHA 397
Query: 315 KCVDQWLRILSCCPLCKQE-LER 336
CVD+WL+I + CPLCK E LER
Sbjct: 398 VCVDRWLKINATCPLCKFEILER 420
>gi|414885024|tpg|DAA61038.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 382
Score = 158 bits (400), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 101/333 (30%), Positives = 163/333 (48%), Gaps = 37/333 (11%)
Query: 23 SSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPF 82
S P EDR++ + + + + TA R +F RR Y +G +P+
Sbjct: 34 SDEPHQEDRLSTSTQTLSSESSPSISPTAYS---TRNLSFPRRDSIYGHGR------SPW 84
Query: 83 NSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ 142
NS W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY
Sbjct: 85 NSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVH 144
Query: 143 LYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQ 202
+D + S+ S N + + L + D+ Q
Sbjct: 145 -RNRHLDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPSISSDA-----Q 198
Query: 203 RAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQIS 262
APN++ LC++ LA + + Y+ PF++ +CCC P + SVL ++G ++GA+ + I
Sbjct: 199 DAPNMYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQ-NRGATQELID 257
Query: 263 RLPSWRYK--RV-----------DSNLEAGNSAPAN--------EDPECCICLAKYKEKE 301
LP++++K RV + E G P ED CCICL KY + +
Sbjct: 258 ALPTYKFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDD 317
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 318 ELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 350
>gi|47497169|dbj|BAD19217.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|47497754|dbj|BAD19854.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|215694772|dbj|BAG89963.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 199
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 73/175 (41%), Positives = 108/175 (61%), Gaps = 19/175 (10%)
Query: 177 SLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV 236
+L+ FFA+WFV+GNVW+F R S APNL+ LCI L ++ + Y+ PF+L ++CCC+
Sbjct: 2 ALDCFFAVWFVVGNVWIFGGR-SSAADAPNLYRLCIVFLTFSCIGYAMPFILCAMICCCL 60
Query: 237 PLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN----------- 285
P I SV+G+ + +GA+ + I+ LP++++K +GN A
Sbjct: 61 PCIISVMGFREDTNNT-RGATSESINSLPTYKFKTKKRRHSSGNEAEGQDGGIVAAGTDK 119
Query: 286 ------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED CCICLAKY +E+R+LPC+H FH +CVD+WL+I + CPLCK E+
Sbjct: 120 ERSLSAEDAVCCICLAKYAHNDELRELPCTHCFHKECVDKWLKINALCPLCKSEI 174
>gi|147859662|emb|CAN81037.1| hypothetical protein VITISV_017962 [Vitis vinifera]
Length = 547
Score = 155 bits (393), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 21/199 (10%)
Query: 157 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 216
++++ R L+ + +L+ FFA+WFV+GNVW+F S APNL+ LCI L
Sbjct: 328 QEEQYEAMGRLKVLVEYFKMALDCFFAVWFVVGNVWIFGGHSSS-SEAPNLYRLCIVFLT 386
Query: 217 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK---RVD 273
++ + Y+ PF+L +CCC+P I S+LG+ ++ +GA+ + I+ LP++++K +
Sbjct: 387 FSCIGYAMPFILCATICCCLPCIISILGFREDL-TQTRGATSESINALPTYKFKLKKNRN 445
Query: 274 SNLEAGNSAPA----------------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
+ GNS ED CCICLAKY +E+R+LPCSH FH +CV
Sbjct: 446 GDDREGNSGAGEGGVVAAGTERERVISGEDAVCCICLAKYANNDELRELPCSHFFHKECV 505
Query: 318 DQWLRILSCCPLCKQELER 336
D+WL+I + CPLCK+E+++
Sbjct: 506 DKWLKINALCPLCKREVKK 524
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 38/63 (60%)
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+P NS W+++EL + QI LS+S+ E P P+ WIVGY GC+ +L +LY R
Sbjct: 101 SPLNSGLWISIELALTVSQIIASXVVLSLSRHEHPHAPLFTWIVGYASGCVATLPILYWR 160
Query: 140 YRQ 142
+R
Sbjct: 161 FRH 163
>gi|357153329|ref|XP_003576416.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Brachypodium
distachyon]
Length = 317
Score = 150 bits (380), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 76/192 (39%), Positives = 116/192 (60%), Gaps = 24/192 (12%)
Query: 166 RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS--FQRAPNLHVLCISLLAWNALSYS 223
R S L +T+++ FFA+WFV+GNVW+F R S Q APN++ LC++ LA + + Y+
Sbjct: 95 RPSILAYHSKTAVDCFFAVWFVVGNVWIFGGRGTSSDAQDAPNMYRLCLAFLALSCVGYA 154
Query: 224 FPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--------- 274
PF++ +CCC P + SVL ++G +GA+ + I LP++++K S
Sbjct: 155 VPFIMCAAICCCFPCLISVLRLQEDLGQT-RGATQELIEALPTYKFKPRRSKNWGLDYAS 213
Query: 275 ---NL-EAGNSAPAN--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR 322
NL E G P ED CCICL KY + +E+R+LPC+H+FH++CVD+WL+
Sbjct: 214 SSENLSEGGILGPGTKKERTVSAEDAVCCICLTKYGDDDELRELPCTHLFHVQCVDKWLK 273
Query: 323 ILSCCPLCKQEL 334
I + CPLCK ++
Sbjct: 274 INAVCPLCKTDI 285
>gi|297743323|emb|CBI36190.3| unnamed protein product [Vitis vinifera]
Length = 920
Score = 145 bits (366), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 93/264 (35%), Positives = 135/264 (51%), Gaps = 27/264 (10%)
Query: 82 FNSSTWMTLELLALLVQISIITFTLSISK-KESPIWPMRIWIVGYDIGCLLSLLLLYGRY 140
F S W++L+ + ++QI LS+SK P + + W+VGY GC+L L LLY RY
Sbjct: 38 FESGLWISLQFILSVIQIVASIVVLSLSKLNGDPDYKLFSWVVGYACGCVLMLPLLYCRY 97
Query: 141 RQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 200
+ ++ F + R ++ + SL FFA+WFV+GNVWVF S +
Sbjct: 98 ILILVKKL--FLI-----------CRLYGIVEVLKMSLSCFFAVWFVLGNVWVFGSS-ST 143
Query: 201 FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP-LISSVLGYNMNMGAADKGASDD 259
+ L LC+ LA + Y+ P C +P LI L A + D
Sbjct: 144 GKDDTKLETLCLVFLASGCIMYAMPVFRCAAFCLLLPFLILPTLASPQEQ--AREANPDY 201
Query: 260 QISRLPSWRYKRVDSN------LEAGNS---APANEDPECCICLAKYKEKEEVRKLPCSH 310
+ LP++ +K ++ L AG A + ED CCICL KY + +EVR+LPCSH
Sbjct: 202 SFNALPTYNFKLKENGTGESGVLAAGTDKERAISGEDAVCCICLGKYADNDEVRELPCSH 261
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
FH++CVD+WL+I CPLC+ EL
Sbjct: 262 FFHVECVDKWLKINPRCPLCQSEL 285
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 63/171 (36%), Positives = 94/171 (54%), Gaps = 14/171 (8%)
Query: 175 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 234
+ +L FF +W V+G VW+ + F A L LC+ L Y+ P + F LC
Sbjct: 351 KMTLSCFFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFASLCL 410
Query: 235 CVP-LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN-------- 285
+P LI + L ++ +GA+ + I+ LP++++K ++ G A
Sbjct: 411 FLPCLICATL---VSPHEKPRGATPESINELPTYKFKSKENGRGEGGVWAAGTIKERTLS 467
Query: 286 -EDPECCICLAKYKEKEEVRKLPC-SHMFHLKCVDQWLRILSCCPLCKQEL 334
ED CCICL +Y + EE+R+LPC SH FH +CVDQWL+I +CCPLC+ EL
Sbjct: 468 EEDAVCCICLGQYADNEELRELPCCSHFFHAECVDQWLKIKACCPLCQSEL 518
Score = 93.6 bits (231), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 60/162 (37%), Positives = 83/162 (51%), Gaps = 20/162 (12%)
Query: 175 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 234
+ L FFA WFV+GN+W +R S A L +LC LL + Y+ P + LL
Sbjct: 743 KMVLGCFFAFWFVLGNIWA--ARVSS--DAEKLDMLCQLLLKTACIMYAIPAIGCFLL-- 796
Query: 235 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 294
+ISS L N+ K +D +R A + ED CCICL
Sbjct: 797 -PRMISSALMAPRNL---TKNGTDAVGVLAAGTEQER----------AISEEDAVCCICL 842
Query: 295 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
KY + +E+R+LPC H FH +CVD+WL+I + CPLC+ E+ R
Sbjct: 843 EKYVDNDELRELPCGHFFHKECVDEWLKINARCPLCQSEIAR 884
Score = 88.2 bits (217), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 94/188 (50%), Gaps = 13/188 (6%)
Query: 157 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 216
E++R+ S +M ++ FF +WFV G+V F S AP L L +LL
Sbjct: 537 EKERTLSGEEVSKVMEVFWLTMSCFFVVWFVFGSVCFFGVS-SSIHDAPILEGLFKALLL 595
Query: 217 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS--DDQISRLPSWRYKRVDS 274
Y+ P + C + L +G S D + LP++++K ++
Sbjct: 596 SGCTIYAMPGIAIASYCLFFSWLILSLLLLKLR-EKHRGTSTPDSPPNVLPTYKFKSKEN 654
Query: 275 N----LEAG----NSAPANEDPECCICLAKYKEKEEVRKLPC-SHMFHLKCVDQWLRILS 325
L AG +++ + ED CCICL Y + EE+R+LPC SH FH++CVD+WL+I +
Sbjct: 655 GGGVLLAAGTKKKSASLSGEDVVCCICLGNYADNEELRELPCCSHFFHVECVDKWLKIKA 714
Query: 326 CCPLCKQE 333
CPLC+ E
Sbjct: 715 RCPLCQSE 722
>gi|147815560|emb|CAN70531.1| hypothetical protein VITISV_010219 [Vitis vinifera]
Length = 305
Score = 144 bits (363), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 91/264 (34%), Positives = 132/264 (50%), Gaps = 31/264 (11%)
Query: 82 FNSSTWMTLELLALLVQISIITFTLSISKKESPI-WPMRIWIVGYDIGCLLSLLLLYGRY 140
F S W++L+ + ++QI LS+SK + + W+VGY GC+L L LLY RY
Sbjct: 36 FESGLWISLQFILSVIQIVASIVVLSLSKXNGDXDYKLFSWVVGYACGCVLMLPLLYCRY 95
Query: 141 RQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 200
R + + + ++ + SL FFA+WFV+GNVWVF S +
Sbjct: 96 IV-----------------RGTVNLQLYGIVEVLKMSLSCFFAVWFVLGNVWVFGSS-ST 137
Query: 201 FQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP-LISSVLGYNMNMGAADKGASDD 259
+ L LC+ LA + Y+ P C +P LI L A + D
Sbjct: 138 GKDDTKLETLCLVFLASGCIMYAMPVXRCAAFCLLLPFLILPTLASPQEQ--AREANPDY 195
Query: 260 QISRLPSWRYKRVDSN------LEAGNS---APANEDPECCICLAKYKEKEEVRKLPCSH 310
+ LP++ +K ++ L AG A + ED CCICL KY + +EVR+LPCSH
Sbjct: 196 SFNALPTYNFKLKENGTGESGVLAAGTDKERAISGEDAVCCICLGKYADNDEVRELPCSH 255
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
FH++CVD+WL+I CPLC+ EL
Sbjct: 256 FFHVECVDKWLKINPRCPLCQSEL 279
>gi|357136994|ref|XP_003570087.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 138 bits (347), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 87/273 (31%), Positives = 143/273 (52%), Gaps = 32/273 (11%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I + L +S ESP P+R+WI GY + C+L ++ + YR + Q
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHG-Q 138
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
G S+ E++ S S + + T +F IW+++G WV + AP L
Sbjct: 139 RGGPSMAADEERGSDGSSSIAKHLESGNT---MFSFIWWIIGFYWVSAGGEVLIRDAPQL 195
Query: 208 HVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 263
+ LCI LA++ F ++ + +CCC+P I ++L Y ++ +GAS+D I +
Sbjct: 196 YWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQ 251
Query: 264 LPSWRYKRVDSN---------------LEAGNSAP-----ANEDPECCICLAKYKEKEEV 303
+P ++++R++ +E G + P A ED ECCICL+ Y + E+
Sbjct: 252 IPRYKFRRINEPEKQSVSMTGSSGGMMIECGTNQPIEKVLAAEDAECCICLSAYDDGAEL 311
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
R+LPC+H FH C+D+WL I + CPLCK + +
Sbjct: 312 RELPCAHHFHCACIDKWLHINATCPLCKLNVRK 344
>gi|357136996|ref|XP_003570088.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 360
Score = 135 bits (340), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 87/276 (31%), Positives = 143/276 (51%), Gaps = 32/276 (11%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I + L +S ESP P+R+WI GY + C+L ++ + YR + Q
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHG-Q 138
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
G S+ E++ S S + + T +F IW+++G WV + AP L
Sbjct: 139 RGGPSMAADEERGSDGSSSIAKHLESGNT---MFSFIWWIIGFYWVSAGGEVLIRDAPQL 195
Query: 208 HVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGA---ADKGASDDQ 260
+ LCI LA++ F ++ + +CCC+P I ++L Y ++ +GAS+D
Sbjct: 196 YWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAVSDQVWLLTYEGASEDD 254
Query: 261 ISRLPSWRYKRVDSN---------------LEAGNSAP-----ANEDPECCICLAKYKEK 300
I ++P ++++R++ +E G + P A ED ECCICL+ Y +
Sbjct: 255 IRQIPRYKFRRINEPEKQSVSMTGSSGGMMIECGTNQPIEKVLAAEDAECCICLSAYDDG 314
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
E+R+LPC+H FH C+D+WL I + CPLCK + +
Sbjct: 315 AELRELPCAHHFHCACIDKWLHINATCPLCKLNVRK 350
>gi|255541482|ref|XP_002511805.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223548985|gb|EEF50474.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 375
Score = 134 bits (338), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 83/281 (29%), Positives = 144/281 (51%), Gaps = 45/281 (16%)
Query: 90 LELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-RQLYASQV 148
L++L L + I L +S KE P P+R+WI+GY + CL + + Y R+L+ +
Sbjct: 86 LDVLWNLAFVGIGVVVLGLSVKEEPQLPLRVWIIGYSLQCLFHIGCVIFEYKRRLFGTSA 145
Query: 149 --------------DGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVF 194
G S+ D +QR ++ + ++ + ++ +F IW+++G WV
Sbjct: 146 RLEASDSTSVSESDGGDSVDDGVEQRGNDGD--TCVVKQLESANTMFSFIWWIVGFYWVT 203
Query: 195 DSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMG 250
+P L+ LCI+ LA++ + + L+ L +CCC+P I +L Y M
Sbjct: 204 AGGQNLTNDSPQLYWLCITFLAFDVIFVIICIAVACLIGLAICCCLPCIIGIL-YAMT-- 260
Query: 251 AADKGASDDQISRLPSWRYKR------VDSNLEAGNSAP--------------ANEDPEC 290
+GA+ ++I +LP ++++R V+++ +A ++ED EC
Sbjct: 261 -DREGATQEEIEQLPMYKFRRIGDFEKVNADFQATFGGMMTECEIDTPTERRLSHEDAEC 319
Query: 291 CICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
CICL+ Y++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 320 CICLSAYEDGTELRQLPCQHHFHSTCIDKWLYINATCPLCK 360
>gi|225442723|ref|XP_002280502.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 295
Score = 133 bits (335), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 87/277 (31%), Positives = 136/277 (49%), Gaps = 26/277 (9%)
Query: 70 QNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRI-WIVGYDIG 128
QN S S + +S ++++L+ + Q+ L +S + +P W++GY G
Sbjct: 25 QNSSTSS-HVHSLDSGLCLSIQLILTVTQMVASLVVLWVSMAQEHRYPKLFPWVMGYASG 83
Query: 129 CLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVM 188
C L L LLY RY + S E + ++ + +L FF +W V+
Sbjct: 84 CALMLPLLYSRYHIARTLNLG----------SSEEAEKLFGVVRFFKMTLSCFFLVWLVL 133
Query: 189 GNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP-LISSVLGYNM 247
G VW+ + F A L LC+ L Y+ P + F LC +P LI + L +
Sbjct: 134 GIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFASLCLFLPCLICATL---V 190
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN---------EDPECCICLAKYK 298
+ +GA+ + I+ LP++++K ++ G A ED CCICL +Y
Sbjct: 191 SPHEKPRGATPESINELPTYKFKSKENGRGEGGVWAAGTIKERTLSEEDAVCCICLGQYA 250
Query: 299 EKEEVRKLPC-SHMFHLKCVDQWLRILSCCPLCKQEL 334
+ EE+R+LPC SH FH +CVDQWL+I +CCPLC+ EL
Sbjct: 251 DNEELRELPCCSHFFHAECVDQWLKIKACCPLCQSEL 287
>gi|326498537|dbj|BAJ98696.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 373
Score = 133 bits (335), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 87/290 (30%), Positives = 143/290 (49%), Gaps = 47/290 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I L +S ESP P+RIWI GY + C++ ++ + YR + +
Sbjct: 80 VALDLLWNLAFILTTAVVLVLSGDESPSVPLRIWIAGYAVQCVVHMVCVAIEYRVRHGQR 139
Query: 148 VDGFSLPDVEQQRSSEDSR-----------------FSHLMNKCRTSLELFFAIWFVMGN 190
G S +++R ++ S F+ + ++ +F IW+++G
Sbjct: 140 --GGSSMAADEERGTDGSSSSIDDAGESGPHGRIGYFASVAKHLESANTMFSFIWWIIGF 197
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYN 246
WV AP L+ LCI LA++ F ++ + +CCC+P I ++L Y
Sbjct: 198 YWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YA 256
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANE 286
++ +GAS+D I ++P ++++RVD +E G + P A E
Sbjct: 257 VS---DQEGASEDDIRQIPKYKFRRVDEPEKQSVTMIESSGGIMIECGTNQPIEKVLAAE 313
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
D ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 314 DAECCICLSVYDDGAELRELPCGHHFHCACIDKWLHINATCPLCKLNVRK 363
>gi|326524540|dbj|BAK00653.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 159/341 (46%), Gaps = 53/341 (15%)
Query: 33 ARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLG-SNPFNSSTWMTLE 91
A RP+ R GA L R+ R R + ++D S P + L+
Sbjct: 33 ALRRPSLR-GAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPV-----VALD 86
Query: 92 LLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGF 151
LL + I++ L +S+ E+ P+R W+ GY + C++ ++ + YR + SQ G
Sbjct: 87 LLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYR-MRRSQRGGG 145
Query: 152 SLPDVEQ-----------------QRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVF 194
+P E+ Q D+ + L ++ +F IW+++G W+
Sbjct: 146 PVPADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWIS 205
Query: 195 DSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMG 250
+ AP L+ LCI LA++ F ++ + +CCC+P I ++L Y ++
Sbjct: 206 AGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAVS-- 262
Query: 251 AADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANEDPEC 290
+GAS+D I ++P ++++RVD E G + P A ED EC
Sbjct: 263 -DQEGASEDDIRQIPKYKFRRVDEPEKDSAGATESSGGIMTECGTNQPIEKALAAEDAEC 321
Query: 291 CICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
CIC++ Y + E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 322 CICISAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCK 362
>gi|326489497|dbj|BAK01729.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 377
Score = 132 bits (331), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 96/341 (28%), Positives = 159/341 (46%), Gaps = 53/341 (15%)
Query: 33 ARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLG-SNPFNSSTWMTLE 91
A RP+ R GA L R+ R R + ++D S P + L+
Sbjct: 33 ALRRPSLR-GAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPV-----VALD 86
Query: 92 LLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGF 151
LL + I++ L +S+ E+ P+R W+ GY + C++ ++ + YR + SQ G
Sbjct: 87 LLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYR-MRRSQRGGG 145
Query: 152 SLPDVEQ-----------------QRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVF 194
+P E+ Q D+ + L ++ +F IW+++G W+
Sbjct: 146 PVPADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWIS 205
Query: 195 DSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMG 250
+ AP L+ LCI LA++ F ++ + +CCC+P I ++L Y ++
Sbjct: 206 AGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAVS-- 262
Query: 251 AADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANEDPEC 290
+GAS+D I ++P ++++RVD E G + P A ED EC
Sbjct: 263 -DQEGASEDDIRQIPKYKFRRVDEPEKDSADATESSGGIMTECGTNQPIEKALAAEDAEC 321
Query: 291 CICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
CIC++ Y + E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 322 CICISAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCK 362
>gi|219884153|gb|ACL52451.1| unknown [Zea mays]
gi|413919225|gb|AFW59157.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 382
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 142/292 (48%), Gaps = 47/292 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-- 145
+ L+LL L I++ L +S+ E P+R W+ GY + C++ ++ + YR +
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVVHMICVAIEYRMRHGQR 144
Query: 146 -SQVDGFSLPDVEQQR----------------SSEDSRFSHLMNKCRTSLELFFAIWFVM 188
S V G + DVE+ + ++ + ++ +F IW+++
Sbjct: 145 GSAVAGAAPADVERGSDASSSSSDEDDRELDLHGRRTDYASIAKHLESANTMFSFIWWII 204
Query: 189 GNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLG 244
G W+ Q AP L+ LCI LA++ F ++ + +CCC+P I ++L
Sbjct: 205 GFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL- 263
Query: 245 YNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----A 284
Y ++ +GAS+D I ++P ++++R D +E G + P A
Sbjct: 264 YAVS---DQEGASEDDIRQIPRYKFRRTDEPEKQDVDPMGPFGGIMIECGTNQPIEKVLA 320
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
ED ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 321 AEDAECCICLSAYDDSAELRELPCGHHFHCTCIDKWLHINATCPLCKYNIRK 372
>gi|226501106|ref|NP_001150553.1| LOC100284185 [Zea mays]
gi|195640148|gb|ACG39542.1| protein binding protein [Zea mays]
Length = 375
Score = 131 bits (329), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 142/292 (48%), Gaps = 47/292 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-- 145
+ L+LL L I++ L +S+ E P+R W+ GY + C++ ++ + YR +
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVVHMICVAIEYRMRHGQR 144
Query: 146 -SQVDGFSLPDVEQQR----------------SSEDSRFSHLMNKCRTSLELFFAIWFVM 188
S V G + DVE+ + ++ + ++ +F IW+++
Sbjct: 145 GSAVAGAAPADVERGSDASSSSSDEDDRELDLHGRRTDYASIAKHLESANTMFSFIWWII 204
Query: 189 GNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLG 244
G W+ Q AP L+ LCI LA++ F ++ + +CCC+P I ++L
Sbjct: 205 GFYWISAGGEEVIQDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL- 263
Query: 245 YNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----A 284
Y ++ +GAS+D I ++P ++++R D +E G + P A
Sbjct: 264 YAVS---DQEGASEDDIRQIPRYKFRRTDEPEKQDVDPMGPFGGIMIECGTNQPIEKVLA 320
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
ED ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 321 AEDAECCICLSAYDDSAELRELPCGHHFHCTCIDKWLHINATCPLCKYNIRK 372
>gi|357137000|ref|XP_003570090.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 354
Score = 130 bits (328), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 85/273 (31%), Positives = 139/273 (50%), Gaps = 32/273 (11%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I + L S E+P P+RIWI GY + C+L ++ + YR Q
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYR-FRHRQ 138
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
G S+ E++ + S + + T +F IW+++G WV + AP L
Sbjct: 139 RGGPSMAADEERGTDGSSSIAKHLESGNT---MFSFIWWIIGFYWVSAGGEVLTRDAPQL 195
Query: 208 HVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 263
+ LCI LA++ F ++ + +CCC+P I ++L Y ++ +GAS+D I +
Sbjct: 196 YWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQ 251
Query: 264 LPSWRYKRVDSN---------------LEAGNSAP-----ANEDPECCICLAKYKEKEEV 303
+P ++++ +D +E G + P A ED ECCICL+ Y + ++
Sbjct: 252 IPRYKFRTMDETEKNSVSLTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSAYDDGVDL 311
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 312 RELPCGHHFHCACIDKWLHINATCPLCKLNVRK 344
>gi|297824629|ref|XP_002880197.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
gi|297326036|gb|EFH56456.1| hypothetical protein ARALYDRAFT_322232 [Arabidopsis lyrata subsp.
lyrata]
Length = 381
Score = 130 bits (328), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 142/286 (49%), Gaps = 46/286 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L++L L + + L S E+P P+R WI+GY++ CL + + YR+ + Q
Sbjct: 85 IVLDVLWNLAFVFVTIAILGFSSDENPHVPLRFWIIGYNLQCLFHVGCVIAEYRRRHRRQ 144
Query: 148 VDGFSLPDV---------------EQQRSSEDSRF---SHLMNKCRTSLELFFAIWFVMG 189
D F D + +DS+ + L ++ +F +W+++G
Sbjct: 145 SDDFPNEDSVLGSSSSHGSSEDESDDYAIVDDSQIEPGTSLAKHLESANAIFSFVWWIIG 204
Query: 190 NVWVFDSRFGSFQRAPNLHVLCISLLAWNA----LSYSFPFLLFLLLCCCVPLISSVLGY 245
WV Q +P L+ LC++ LA++ L + L+ + +CCC+P I +VL
Sbjct: 205 FYWVTADSEELSQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCCCLPCIIAVLYA 264
Query: 246 NMNMGAADKGASDDQISRLPSWRY------KRVDSNL---------EAGNSAP-----AN 285
+ G GASD++I RLP +++ ++V+ + + G +P ++
Sbjct: 265 LADRG----GASDEEIERLPKFKFLTVRNSEKVNGEIRETHGGIMTQLGVDSPTERVLSS 320
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
++ ECCICL Y++ E+R++ C H FH C+D+WLRI + CPLCK
Sbjct: 321 DEAECCICLCDYEDGTELREMSCRHHFHEACIDKWLRINATCPLCK 366
>gi|357137002|ref|XP_003570091.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Brachypodium distachyon]
Length = 364
Score = 130 bits (327), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 86/280 (30%), Positives = 141/280 (50%), Gaps = 36/280 (12%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I + L S E+P P+RIWI GY + C+L ++ + YR Q
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYR-FRHRQ 138
Query: 148 VDGFSLPDVEQQ-------RSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 200
G S+ E++ + ED+ S + + +F IW+++G WV
Sbjct: 139 RGGPSMAADEERGTDGSSSSTDEDAGVSIPHGRLESGNTMFSFIWWIIGFYWVSAGGEVL 198
Query: 201 FQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGA 256
+ AP L+ LCI LA++ F ++ + +CCC+P I ++L Y ++ +GA
Sbjct: 199 TRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGA 254
Query: 257 SDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANEDPECCICLAK 296
S+D I ++P ++++ +D +E G + P A ED ECCICL+
Sbjct: 255 SEDDIRQIPRYKFRTMDETEKNSVSLTGSSGGIMIECGTNQPIEKVLAAEDAECCICLSA 314
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
Y + ++R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 315 YDDGVDLRELPCGHHFHCACIDKWLHINATCPLCKLNVRK 354
>gi|357521319|ref|XP_003630948.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355524970|gb|AET05424.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 336
Score = 130 bits (327), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 84/264 (31%), Positives = 134/264 (50%), Gaps = 33/264 (12%)
Query: 97 VQISIITFTLSISKKESPIWPMRIWIVGYDIGCLL--SLLLLYGRYRQLYAS--QVDGFS 152
V + + L S E+P P+R+WI GY + CL+ +L+LL R R + + D S
Sbjct: 67 VFVVVAAVMLGCSVDENPNTPIRLWIFGYAVQCLVHVALVLLEYRRRNVIGGGRERDEES 126
Query: 153 LPDVEQQRSSEDSRF-----SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
L DV +D F S +C + + +W+++G WV + Q AP L
Sbjct: 127 LDDVNDSEEDDDVEFLNSSSSGFAKRCSSLNTMLSLLWWMVGFYWVVNGGDILIQDAPRL 186
Query: 208 HVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 263
+ L + LA++ F L+ + LCCC+P I +L Y + A +GAS+ +S
Sbjct: 187 YWLAVVFLAFDVFFAVFCVALACLIGIALCCCLPCIIGIL-YAV---AGQEGASESDLST 242
Query: 264 LPSWRYK----------RVDSNLEAGNSAPANE------DPECCICLAKYKEKEEVRKLP 307
LP +R++ + S + NS+ ANE D ECCIC++ Y+++ E+ LP
Sbjct: 243 LPKYRFQVPGNEETPSPKGGSMVPIENSSGANERVLSPEDAECCICISPYEDEAELHALP 302
Query: 308 CSHMFHLKCVDQWLRILSCCPLCK 331
C+H FH C+ +WL++ + CPLCK
Sbjct: 303 CNHHFHSTCIVKWLKMNATCPLCK 326
>gi|224101895|ref|XP_002312464.1| predicted protein [Populus trichocarpa]
gi|222852284|gb|EEE89831.1| predicted protein [Populus trichocarpa]
Length = 351
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 137/272 (50%), Gaps = 40/272 (14%)
Query: 94 ALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYR------------ 141
A V +S+ +++ KE P P+RIWI GY + CL+ ++L++ YR
Sbjct: 76 AAFVVVSVTMLLVTV--KERPNTPIRIWICGYALQCLVHVVLVWLEYRRRNTRRERDIES 133
Query: 142 QLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF 201
Q +++ + D E R+S S S + +C + + +W+++G WV
Sbjct: 134 QQQSTEEENVPESDEEDDRASFISPRSSVTKRCESVNTMVSFLWWMVGFYWVVSGGDVLL 193
Query: 202 QRAPNLHVLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGAS 257
Q AP+L+ L + LA++ F +L L LCCC+P I ++L Y + A +GAS
Sbjct: 194 QNAPHLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGAS 249
Query: 258 DDQISRLPSWRYKRV----DSNLEAGNSAPAN--------------EDPECCICLAKYKE 299
+ + +LP ++++ + +EAG P ED ECCICL+ Y++
Sbjct: 250 EADLIQLPKYKFQMIRNEEKPGIEAGKMVPVETSSRFLGTERILLPEDAECCICLSPYED 309
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
E+ LPC+H FH C+ +WL++ + CPLCK
Sbjct: 310 GAELHALPCNHHFHATCIVKWLKMNATCPLCK 341
>gi|297599741|ref|NP_001047717.2| Os02g0674700 [Oryza sativa Japonica Group]
gi|255671161|dbj|BAF09631.2| Os02g0674700 [Oryza sativa Japonica Group]
Length = 379
Score = 130 bits (326), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 140/284 (49%), Gaps = 44/284 (15%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I + L++S++ESP P+R+WIVGY + C+L + + YR
Sbjct: 85 VALDLLWNLAFILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMRRGQS 144
Query: 148 VDGFSLPDVEQ--------------QRS--SEDSRFSHLMNKCRTSLELFFAIWFVMGNV 191
+ D E +R+ + + + ++ +F IW+++G
Sbjct: 145 GESPMAADEETGTDGSSSSSDEDAGERAPRGRNGDYVRIAKHLESANTMFSFIWWIIGFY 204
Query: 192 WVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNM 247
WV AP L+ LCI LA++ F ++ + +CCC+P I ++L Y +
Sbjct: 205 WVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAV 263
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANED 287
+ +GAS+D I ++P ++++R+D +E G + P A ED
Sbjct: 264 S---DQEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSSGGIMIECGTNQPIEKVLAAED 320
Query: 288 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 321 AECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCK 364
>gi|356565289|ref|XP_003550874.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 379
Score = 129 bits (325), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 88/282 (31%), Positives = 140/282 (49%), Gaps = 42/282 (14%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLY--- 144
+ L++L ++ L +S+ E+P P+R+WIVGY + +L + + YR+
Sbjct: 88 VVLDILWNCAFVAAAATVLVLSRNENPNMPLRLWIVGYALQSVLHVACVCVEYRRRLRHR 147
Query: 145 ----ASQVDG-----FSLP--DVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWV 193
A+ V G S P D S D + ++ +F IW+V+G WV
Sbjct: 148 EHSNAAAVSGDGSGDLSSPSMDGSGHYVSFDDDGISMAKHLESANTMFSFIWWVVGFYWV 207
Query: 194 FDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNM 249
Q +P L+ LCI+ L ++ F ++ + +CCC+P I ++L Y +
Sbjct: 208 SADSEALVQDSPLLYWLCIAFLGFDVFFVVFCIALACIIGIAVCCCLPCIIALL-YAV-- 264
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLE-AGNSAPA-------------------NEDPE 289
A +GAS + I +L ++++R ++N + AGN+ A +ED E
Sbjct: 265 -ADQEGASKEDIEQLSKFKFQRTETNEKHAGNTQGAAGGIMIECDADSPIEHVLSDEDAE 323
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
CCICL+ Y + E+RKLPCSH FH CVD+WL I + CPLCK
Sbjct: 324 CCICLSAYDDGVELRKLPCSHHFHCACVDKWLHINATCPLCK 365
>gi|212276082|ref|NP_001130198.1| uncharacterized LOC100191292 [Zea mays]
gi|194688522|gb|ACF78345.1| unknown [Zea mays]
gi|194702646|gb|ACF85407.1| unknown [Zea mays]
gi|413919337|gb|AFW59269.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 129 bits (323), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 79/290 (27%), Positives = 139/290 (47%), Gaps = 45/290 (15%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I++ L +S+ E P+R W+ GY + C++ ++ + YR + +
Sbjct: 85 VALDLLWNLAFITVAAVVLVLSRDEDSPMPLRTWVAGYALQCVIHMVCVAIEYRMRHGQR 144
Query: 148 VDGFSLPDVEQ-----------------QRSSEDSRFSHLMNKCRTSLELFFAIWFVMGN 190
+ P E+ R + ++ + ++ +F IW+++G
Sbjct: 145 GGAGAAPADEERGSDGSSSSSDEDDRELDRHGRRTDYASIAKHLESANTMFSFIWWIIGF 204
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYN 246
W+ + AP L+ LCI LA++ F ++ + +CCC+P I ++L Y
Sbjct: 205 YWISAGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YA 263
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANE 286
++ +GAS+D I ++P ++++R D E G + P A E
Sbjct: 264 VS---DQEGASEDDIRQIPRYKFRRTDEPEKQDVDPMGPFGGIMTECGTNQPIEKVLAAE 320
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
D ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 321 DAECCICLSAYDDGAELRELPCGHHFHCTCIDKWLHINATCPLCKYNIRK 370
>gi|301133542|gb|ADK63393.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 313
Score = 128 bits (322), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 79/270 (29%), Positives = 144/270 (53%), Gaps = 34/270 (12%)
Query: 92 LLALLVQISIITFTLSIS---KKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQV 148
+L +L ++ + T+ +S +E P P+R WIVGY++ CL+ + + YR+ +++
Sbjct: 33 VLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHIACVIAEYRRRESNRD 92
Query: 149 DGFSLPDVEQQR---SSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 205
L V+ +E + + ++ +F +W+V+G WV Q +P
Sbjct: 93 LDSGLSSVQGSSDGYGAEIESGNSVAKPIESTNAIFSFVWWVIGFYWVTADAEELAQSSP 152
Query: 206 NLHVLCISLLAWN----ALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 261
L+ LC++ LA++ L + L+ + +CCC+P I +VL Y + A +GASD++I
Sbjct: 153 QLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCCCLPCIIAVL-YAL---ADREGASDEEI 208
Query: 262 SRLPSWRY------KRVDSNL---------EAGNSAP-----ANEDPECCICLAKYKEKE 301
+LP +++ ++V+ + + G +P ++++ ECCICL Y++
Sbjct: 209 EKLPKFKFLTVRNSEKVNGEIRETRGGIMTQLGVDSPSERVLSSDEAECCICLCDYEDGT 268
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
E+R+L C H FH C+D+WLRI + CPLCK
Sbjct: 269 ELRELSCRHHFHEACIDKWLRINATCPLCK 298
>gi|357136992|ref|XP_003570086.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 128 bits (322), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 88/285 (30%), Positives = 144/285 (50%), Gaps = 46/285 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I + L +S ESP P+R+WI GY + C+L ++ + YR + Q
Sbjct: 80 VALDLLWNLAFILVAAVVLVLSSDESPSVPLRVWIAGYAVQCVLHMVCVAIEYRVRHG-Q 138
Query: 148 VDGFSLPDVEQQRSS-------EDS--RFSH--------LMNKCRTSLELFFAIWFVMGN 190
G S+ E++ S ED+ +H + + +F IW+++G
Sbjct: 139 RGGPSMAADEERGSDGSSSSTDEDAGENVTHGRIGDCVSIAKHLESGNTMFSFIWWIIGF 198
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYN 246
WV + AP L+ LCI LA++ F ++ + +CCC+P I ++L Y
Sbjct: 199 YWVSAGGEVLIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YA 257
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANE 286
++ +GAS+D I ++P ++++R++ +E G + P A E
Sbjct: 258 VS---DQEGASEDDIRQIPRYKFRRINEPEKQSVSMTGSSGGMMIECGTNQPIEKVLAAE 314
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
D ECCICL+ Y + E+R+LPC+H FH C+D+WL I + CPLCK
Sbjct: 315 DAECCICLSAYDDGAELRELPCAHHFHCACIDKWLHINATCPLCK 359
>gi|147815561|emb|CAN70532.1| hypothetical protein VITISV_010220 [Vitis vinifera]
Length = 232
Score = 128 bits (321), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 77/225 (34%), Positives = 114/225 (50%), Gaps = 24/225 (10%)
Query: 121 WIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLEL 180
W++GY GC L L LLY RY + S E + ++ + +L
Sbjct: 13 WVMGYASGCALMLPLLYSRYXIARTLNLG----------SSEEAEKLFGVVRFFKMTLSC 62
Query: 181 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP-LI 239
FF +W V+G VW+ + F A L LC+ L Y+ P + F LC +P LI
Sbjct: 63 FFLVWLVLGIVWIPGALFSIRDDATLLETLCLVLFLSGCFVYAIPGMRFASLCLFLPCLI 122
Query: 240 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN---------EDPEC 290
+ L ++ +GA+ + I+ LP++++K ++ G A ED C
Sbjct: 123 CATL---VSPHEKPRGATPESINELPTYKFKSKENGRGEGGVWAAGTIKERTLSEEDAVC 179
Query: 291 CICLAKYKEKEEVRKLPC-SHMFHLKCVDQWLRILSCCPLCKQEL 334
CICL +Y + EE+R+LPC SH FH +CVDQWL+I +CCPLC+ EL
Sbjct: 180 CICLGQYADNEELRELPCCSHFFHAECVDQWLKIKACCPLCQSEL 224
>gi|301133592|gb|ADK63418.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 363
Score = 127 bits (320), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 100/345 (28%), Positives = 169/345 (48%), Gaps = 50/345 (14%)
Query: 26 PATEDR----MARNRPAARA--GAPSFLIRTA------MRISRARWFNFLRRVFHYQNGS 73
PAT+D + RNR ++ GA S L+R A +R S R +R Q
Sbjct: 15 PATDDASSPLLNRNRRPSQPLRGAASRLLRRASSRGMMLRESSVR----VRETAAEQIEE 70
Query: 74 RSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSL 133
R S S + L++L L + + S +E P P+R WIVGY++ CL+ +
Sbjct: 71 RQ---SEWAYSKPVIVLDVLWNLAFVFVTVGVSWFSSEEDPRAPLRFWIVGYNLQCLIHI 127
Query: 134 LLLYGRYRQLYASQVDGFSLPDVEQQR---SSEDSRFSHLMNKCRTSLELFFAIWFVMGN 190
+ YR+ +++ L V+ +E + + ++ +F +W+V+G
Sbjct: 128 ACVIAEYRRRESNRDLDSGLSSVQGSSDGYGAEIESGNSVAKHIESTNAIFSFVWWVIGF 187
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNA----LSYSFPFLLFLLLCCCVPLISSVLGYN 246
WV Q +P L+ LC++ LA++ L + L+ + +CCC+P I +VL Y
Sbjct: 188 YWVTADAEELAQSSPQLYWLCVAFLAFDVIFVVLCVAVACLIGIAVCCCLPCIIAVL-YA 246
Query: 247 MNMGAADKGASDDQISRLPSWRY------KRVDSNL---------EAGNSAPA-----NE 286
+ A +GASD++I +LP +++ ++V+ + + G P+ ++
Sbjct: 247 L---ADREGASDEEIEKLPKFKFLTVRNSEKVNGEIRETRGGIMTQLGVDFPSERVLSSD 303
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ ECCICL Y++ E+R+L C H FH C+D+WLRI + CPLCK
Sbjct: 304 EAECCICLCDYEDGTELRELFCRHHFHEACIDKWLRINATCPLCK 348
>gi|302772434|ref|XP_002969635.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
gi|300163111|gb|EFJ29723.1| hypothetical protein SELMODRAFT_66385 [Selaginella moellendorffii]
Length = 321
Score = 127 bits (319), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 87/288 (30%), Positives = 144/288 (50%), Gaps = 48/288 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-- 145
+ L+L+ L +++ L IS+ E P P+RIW++GY + C+L + + YR+
Sbjct: 30 VVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWVLGYALQCVLHMSCVVSEYRRRRRRR 89
Query: 146 SQVDGFSLPDVEQQR----SSEDSR----------FSHLMNKCRTSLELFFAIWFVMGNV 191
S G L D+E S+E+ F L + ++ +F +W+V+G
Sbjct: 90 SSGAGMELEDMEDNEIDHISNEEKHRLLTGSSFFPFCSLAKRLESANTMFSFVWWVVGFY 149
Query: 192 WVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNM 247
W+ Q +P ++ LCI LA++ F ++ + +CCC+P I ++L +
Sbjct: 150 WITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCVALACMIGIAVCCCLPCIIAILYAVV 209
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDS--------NLEAGNSAPAN-------------- 285
+ +GAS++ IS LP+ ++KRV S + E + PA
Sbjct: 210 D----QEGASEEDISVLPTLKFKRVKSPSCSSTKPDEEDKAALPAGGVMCSSESLFQRML 265
Query: 286 --EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED ECCICL+ Y++ E+R+LPC+H FH C+ +WLRI + CPLCK
Sbjct: 266 SAEDAECCICLSSYEDDAELRELPCNHHFHGSCIVKWLRINATCPLCK 313
>gi|449432181|ref|XP_004133878.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
gi|449480146|ref|XP_004155812.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Cucumis
sativus]
Length = 385
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 81/286 (28%), Positives = 144/286 (50%), Gaps = 50/286 (17%)
Query: 92 LLALLVQIS--IITFT-LSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ- 147
LL LL ++ II+FT L +S E P P+R WI+GY + C++ + + Y++ +++
Sbjct: 90 LLDLLWNLAFVIISFTVLGLSTSEKPSVPLRFWIIGYALQCIIHMSCVAVEYKRRRSTRE 149
Query: 148 ------------------VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMG 189
V G D +++ + S+L+ ++ +F IW+++G
Sbjct: 150 PTGLDRNSDWTSGEDSNSVSGSDGDDYATEQTVNEDESSNLVKHIESANTMFSFIWWLLG 209
Query: 190 NVWVFDSRFGSFQRAPNLHVLCISLLAWNA----LSYSFPFLLFLLLCCCVPLISSVLGY 245
WV + +P L+ L I+ LA++ + + L+ + +CCC+P I ++L Y
Sbjct: 210 FYWVTAGGQELIEGSPQLYWLSITFLAFDVVFVLICVAIACLVGVAICCCLPCIIAIL-Y 268
Query: 246 NMNMGAADKGASDDQISRLPSWRYKR------VDSNLEAGNS---------APAN----- 285
+ +GA+ ++I RLP + + R V+ +++ + AP
Sbjct: 269 AV---TDQEGATKEEIERLPKYTFNRTGDVEKVNGDIQESSGGIMSNCDTDAPTERFLRP 325
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED ECCICL+ Y+ E+R+LPC+H FH C+D+WL + + CPLCK
Sbjct: 326 EDSECCICLSAYENGAELRELPCNHHFHCNCIDKWLHMNATCPLCK 371
>gi|297817430|ref|XP_002876598.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
gi|297322436|gb|EFH52857.1| hypothetical protein ARALYDRAFT_486593 [Arabidopsis lyrata subsp.
lyrata]
Length = 377
Score = 126 bits (317), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 138/288 (47%), Gaps = 54/288 (18%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS- 146
+ L++L V + + L S +E P P+R+WI+GY+ CLL + + Y++ +
Sbjct: 85 IVLDILWNFVFVIVSIAILGFSSEEDPDVPLRLWIIGYNFQCLLHVGCVIAEYKRRREAN 144
Query: 147 -------------------QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFV 187
+ DG+S+ D ++D + ++ +F +W++
Sbjct: 145 SPPSGEDSSNHESLSGSDDESDGYSIND------TDDDHGTSFTKHLESANTMFSFVWWI 198
Query: 188 MGNVWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVL 243
+G WV Q +P L+ LC++ LA++ + + L+ + +CCC+P I ++L
Sbjct: 199 IGFYWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAIL 258
Query: 244 GYNMNMGAADKGASDDQISRLPSWRY-------------KRVDSNLEAGNSAPA------ 284
Y + A +GA D++I RL +++ + + G A +
Sbjct: 259 -YAL---ADQEGAPDEEIERLLKFKFLVVKNSEKVNGEIRETQGGIMTGLGAESQTERVL 314
Query: 285 -NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ED EC ICL Y++ E+R+LPC H FH CVD+WLRI + CPLCK
Sbjct: 315 SSEDAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 362
>gi|225453718|ref|XP_002271651.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 382
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 49/289 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL---YGRYRQLY 144
+ L+++ L + + L +S+ E+P P+R+WI+GY + C+L ++ + Y R R+L
Sbjct: 83 VILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLV 142
Query: 145 ASQV------------------DGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWF 186
+S D D + + D + + ++ +F IW+
Sbjct: 143 SSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRDEDETSVAKHLESANTMFSFIWW 202
Query: 187 VMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSV 242
++G WV + +P L+ LCI LA++ + ++ + +CCC+P I ++
Sbjct: 203 IIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAI 262
Query: 243 LGYNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAPA--- 284
L Y + A +GA+ ++I RLP ++++R+ + E P
Sbjct: 263 L-YTV---ADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHV 318
Query: 285 --NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED ECCICL+ Y+++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 319 IPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCK 367
>gi|224130104|ref|XP_002320753.1| predicted protein [Populus trichocarpa]
gi|222861526|gb|EEE99068.1| predicted protein [Populus trichocarpa]
Length = 320
Score = 126 bits (316), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 84/278 (30%), Positives = 139/278 (50%), Gaps = 41/278 (14%)
Query: 90 LELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ------- 142
+++L L + I L +S +E P P+R+WIVGY + CL ++ + YR+
Sbjct: 33 IDVLRNLAFVIIAVGVLGLSLEEKPKVPLRVWIVGYGLQCLCHVVCVVVEYRKRRNLGFE 92
Query: 143 ----LYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDS-R 197
L + D ED+ S + + ++ + IW+V+G WV + R
Sbjct: 93 ESGILSSGSGDSLGFGTHRSGNDGEDT--SRVPKRVESASTMVSVIWWVIGFYWVTAAGR 150
Query: 198 FGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAAD 253
+ +P L+ LC++ LA++AL + L+ + +CCC+P I +L M
Sbjct: 151 QDLEENSPQLYWLCVTFLAFDALFVIICAAAACLIGIAVCCCLPCIIGIL---YAMTDPQ 207
Query: 254 KGASDDQISRLPSWRY------KRVDSN---------LEAGNSAP-----ANEDPECCIC 293
+GA+ ++I RLP +++ ++VD E N P ++ED ECCIC
Sbjct: 208 EGATAEEIDRLPKYKFCRAEAFEKVDGENPEICGGMMTECDNDTPIERAVSHEDAECCIC 267
Query: 294 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
L+ Y+ E+R+LPC+H FH C+D+WL I + CPLCK
Sbjct: 268 LSAYENGSELRELPCNHHFHCMCIDKWLCINATCPLCK 305
>gi|255537347|ref|XP_002509740.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223549639|gb|EEF51127.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 383
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 87/287 (30%), Positives = 142/287 (49%), Gaps = 48/287 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL---- 143
+ L++L +++ L +S+KE P P+R+WIVGY + C+L ++ + YR+
Sbjct: 88 VILDILWNFAFVAVAIGVLIMSRKEDPSMPLRLWIVGYGLQCVLHMVCVCVEYRRRRRRR 147
Query: 144 ----YASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTS-----LE----LFFAIWFVMGN 190
+ DG +L + S E + L + TS LE +F IW+++G
Sbjct: 148 RRVGFGIGSDG-NLSSGSRGDSGEYVTLAQLEDHDGTSSVAKHLESANTMFSFIWWIIGF 206
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYN 246
WV +P L+ LCI L ++ + ++ + +CCC+P I ++L Y
Sbjct: 207 YWVSAGGQALSHNSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YA 265
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSN-----------------LEAGNSAP-----A 284
+ A +GAS + I +L ++++RVD++ E G +P +
Sbjct: 266 V---ADQEGASKEDIEQLSKFKFRRVDNDEKLTGNGDEQGPLGGVMTECGTDSPVEHILS 322
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED ECCICL+ Y + E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 323 EEDAECCICLSAYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 369
>gi|449453127|ref|XP_004144310.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449488257|ref|XP_004157983.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 347
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 79/272 (29%), Positives = 128/272 (47%), Gaps = 38/272 (13%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+L L + + L +S +E P P+R W+ GY + CL + ++ Y + +
Sbjct: 76 LVLDLFWNLFFVFLSVIVLVLSAEEKPTAPLRFWLSGYAVQCLFHVFFVFVAYLRRSSRY 135
Query: 148 VDGFSLPDVEQQRSSEDSRFSH----LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQR 203
GF E + + ++ R SH +M + + IW+V G W+ +
Sbjct: 136 RLGF-----ENRGAQDELRLSHNRIRVMKRLEALNTMVAYIWWVFGFYWIVMGGQALLEG 190
Query: 204 APNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 259
+P L+ L + LA++ F F+ F +CC +P ++ GY MN +GAS+D
Sbjct: 191 SPRLYWLAVVFLAFDVFFIIFCTGMAFVGFFAVCCIIPFLA--YGYTMNF---LEGASED 245
Query: 260 QISRLPSWRY--------------KRVDSNLEAGNSAPANE------DPECCICLAKYKE 299
+I LP +R+ + V LE G + E D CCICLA+Y
Sbjct: 246 EIRALPKYRFHQDNPLESFDNDKKQEVGMTLEPGYNGHTTEHTLNAEDSACCICLAQYVH 305
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
++ LPC+H FH +C+ +WLRI + CPLCK
Sbjct: 306 GVQLCMLPCNHHFHTRCIVKWLRINATCPLCK 337
>gi|302774967|ref|XP_002970900.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
gi|300161611|gb|EFJ28226.1| hypothetical protein SELMODRAFT_66382 [Selaginella moellendorffii]
Length = 321
Score = 125 bits (315), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 86/288 (29%), Positives = 144/288 (50%), Gaps = 48/288 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-- 145
+ L+L+ L +++ L IS+ E P P+RIW++GY + C+L + + YR+
Sbjct: 30 VVLDLIWNLAFVTVALVVLVISQSEQPCTPLRIWVLGYALQCVLHMSCVVSEYRRRRRRR 89
Query: 146 SQVDGFSLPDVEQQR----SSEDSR----------FSHLMNKCRTSLELFFAIWFVMGNV 191
S G L D+E S+E+ F L + ++ +F +W+V+G
Sbjct: 90 SSGAGMELEDMEDNEIDHISNEEKHSLLTGSSFFPFCSLAKRLESANTMFSFVWWVVGFY 149
Query: 192 WVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNM 247
W+ Q +P ++ LCI LA++ F ++ + +CCC+P I ++L +
Sbjct: 150 WITAGSEALVQSSPRVYWLCIVFLAFDVFFVVFCVALACMIGIAVCCCLPCIIAILYAVV 209
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDS--------NLEAGNSAPAN-------------- 285
+ +GAS++ IS LP+ ++KRV + + E + PA
Sbjct: 210 D----QEGASEEDISVLPTLKFKRVRNPSCSSTKPDEEDKAALPAGGVMCSSESLFQRML 265
Query: 286 --EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED ECCICL+ Y++ E+R+LPC+H FH C+ +WLRI + CPLCK
Sbjct: 266 SAEDAECCICLSSYEDDAELRELPCNHHFHGSCIVKWLRINATCPLCK 313
>gi|225453720|ref|XP_002271690.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 365
Score = 125 bits (314), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 140/272 (51%), Gaps = 32/272 (11%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL---YGRYRQLY 144
+ L+++ L + + L +S+ E+P P+R+WI+GY + C+L ++ + Y R R+L
Sbjct: 83 VILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLV 142
Query: 145 AS-QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQR 203
+S ++ SS + + ++ +F IW+++G WV +
Sbjct: 143 SSGALERSGGWGSGHLSSSSGNFSCSVAKHLESANTMFSFIWWIIGFYWVSAGGQDLTRD 202
Query: 204 APNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 259
+P L+ LCI LA++ + ++ + +CCC+P I ++L Y + A +GA+ +
Sbjct: 203 SPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAIL-YTV---ADQEGATKE 258
Query: 260 QISRLPSWRYKRVDSN---------------LEAGNSAPA-----NEDPECCICLAKYKE 299
+I RLP ++++R+ + E P ED ECCICL+ Y++
Sbjct: 259 EIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDAECCICLSAYED 318
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 319 ETELRELPCRHRFHCTCIDKWLYINATCPLCK 350
>gi|296089059|emb|CBI38762.3| unnamed protein product [Vitis vinifera]
Length = 329
Score = 125 bits (313), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 79/289 (27%), Positives = 141/289 (48%), Gaps = 49/289 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL---YGRYRQLY 144
+ L+++ L + + L +S+ E+P P+R+WI+GY + C+L ++ + Y R R+L
Sbjct: 30 VILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVCVCVEYKRRRRLV 89
Query: 145 ASQV------------------DGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWF 186
+S D D + + D + + ++ +F IW+
Sbjct: 90 SSGALERSGGWGSGHLSSSSGSDEGDPIDYRVEVRNRDEDETSVAKHLESANTMFSFIWW 149
Query: 187 VMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSV 242
++G WV + +P L+ LCI LA++ + ++ + +CCC+P I ++
Sbjct: 150 IIGFYWVSAGGQDLTRDSPQLYWLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAI 209
Query: 243 LGYNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAPA--- 284
L Y + A +GA+ ++I RLP ++++R+ + E P
Sbjct: 210 L-YTV---ADQEGATKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHV 265
Query: 285 --NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED ECCICL+ Y+++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 266 IPQEDAECCICLSAYEDETELRELPCRHRFHCTCIDKWLYINATCPLCK 314
>gi|357136998|ref|XP_003570089.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 374
Score = 125 bits (313), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 89/290 (30%), Positives = 143/290 (49%), Gaps = 46/290 (15%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I + L S E+P P+RIWI GY + C+L ++ + YR Q
Sbjct: 80 VALDLLWNLAFILVSAVVLVFSSDENPSVPLRIWIAGYAVQCVLHIVCVAIEYR-FRHRQ 138
Query: 148 VDGFSLPDVEQQ-------RSSEDSRFS----HLMNKCRTSLEL------FFAIWFVMGN 190
G S+ E++ + ED+ S + N R + L F IW+++G
Sbjct: 139 RGGPSMAADEERGTDGSSSSTDEDAGVSIPHGRIGNYVRIAKHLESGNTMFSFIWWIIGF 198
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYN 246
WV + AP L+ LCI LA++ F ++ + +CCC+P I ++L Y
Sbjct: 199 YWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YA 257
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANE 286
++ +GAS+D I ++P ++++ +D +E G + P A E
Sbjct: 258 VS---DQEGASEDDIRQIPRYKFRTMDETEKNSVSLTGSSGGIMIECGTNQPIEKVLAAE 314
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
D ECCICL+ Y + ++R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 315 DAECCICLSAYDDGVDLRELPCGHHFHCACIDKWLHINATCPLCKLNVRK 364
>gi|356513054|ref|XP_003525229.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 2 [Glycine
max]
Length = 334
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 80/261 (30%), Positives = 133/261 (50%), Gaps = 32/261 (12%)
Query: 99 ISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVD---GFSLPD 155
+ + L+ + KE+P P+R WI GY + CL+ + L++ YR+ + D SL
Sbjct: 74 VLVSAVMLACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQY 133
Query: 156 VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLL 215
+ S ED+RF+ +C + + +W+++G WV Q AP L+ L + L
Sbjct: 134 DDVNDSDEDARFT---KRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFL 190
Query: 216 AWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR 271
A++ F +L L LCCC+P I ++L Y + A +GAS+ +S LP +R++
Sbjct: 191 AFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASESDLSILPKYRFQL 246
Query: 272 VDSN------------LEAGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFH 313
+ + +E N NE D ECCIC++ Y++ E+ LPC+H FH
Sbjct: 247 LSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFH 306
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
C+ +WL++ + CPLCK +
Sbjct: 307 STCIVKWLKMNATCPLCKYNI 327
>gi|255570075|ref|XP_002526000.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
gi|223534732|gb|EEF36424.1| cleavage and polyadenylation specificity factor, putative [Ricinus
communis]
Length = 963
Score = 124 bits (312), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 105/362 (29%), Positives = 162/362 (44%), Gaps = 76/362 (20%)
Query: 20 PYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLG- 78
P +P A M R R G PS L+R + R+D G
Sbjct: 618 PRQEAPRAASLAMLLGRVTGRRG-PSMLVRETAALELEE--------------RRADWGY 662
Query: 79 SNPFNS--STWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL 136
S P + W T V +SI LS+ KE P P+RIWI GY + CL+ ++L+
Sbjct: 663 SKPVVALDMVWNTA-----FVVVSITMLILSV--KEKPNTPIRIWICGYALQCLVHVVLV 715
Query: 137 YGRYRQLYA---------------SQVDGFSLPDVEQQRSSED----------SRFSHLM 171
+ YR+ + ++V+G + + SED S S ++
Sbjct: 716 WIEYRRRNSRRVRDEERQQQQQQQAEVEGQHEENEGENVDSEDEDGVDRASVTSNRSSVI 775
Query: 172 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL 231
+C + + +W+++G WV Q AP+L+ L + LA++ F +L L
Sbjct: 776 KRCESVNTMASFLWWIVGFYWVVSGGDELLQNAPHLYWLAVVFLAFDVFFAIFCVVLACL 835
Query: 232 ----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK----RVDSNLEAGNSAP 283
LCCC+P I ++L Y + A +GAS+ +S LP +R++ ++ AG P
Sbjct: 836 IGIALCCCLPCIIAIL-YAV---AGQEGASEADLSILPKYRFQLTVEEEKPSVGAGKMVP 891
Query: 284 --------ANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 329
ANE D ECCICL Y++ E+ LPC+H FH C+ +WL++ + CPL
Sbjct: 892 IETSSGYLANERILLPEDAECCICLCPYEDGAELHTLPCNHHFHSTCIVKWLKMNATCPL 951
Query: 330 CK 331
CK
Sbjct: 952 CK 953
>gi|297840183|ref|XP_002887973.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297333814|gb|EFH64232.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 373
Score = 124 bits (311), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 140/288 (48%), Gaps = 48/288 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-- 145
+ L+ + L +++ T L +S E+P P+R+W++GY + C++ ++ + YR+ +
Sbjct: 75 VVLDFVWNLAFVAVATAVLVLSSDENPNMPLRVWVIGYGLQCMMHMVCVCVEYRRRNSRR 134
Query: 146 -------------SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVM 188
+ DG L R E + + N LE + IW+V+
Sbjct: 135 RRDMSPRSSSSSMEEEDGLGLSRNSDDRYLELGQLENENNSFAKHLESANTMISFIWWVI 194
Query: 189 GNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLG 244
G WV Q +P L+ LCI L ++ + ++ + +CCC+P I +VL
Sbjct: 195 GFYWVSSGGQELAQGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL- 253
Query: 245 YNMNMGAADKGASDDQISRLPSWRYKRVDSNL----------------EAGNSAPA---- 284
Y + A +GAS + I +L +++++V ++ E G +P
Sbjct: 254 YAV---AEQEGASKEDIDQLTKFKFRKVGDSVKHTVDEEQGDSGGLMTECGTDSPVEHTL 310
Query: 285 -NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ED ECCICL+ Y+++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 311 PHEDAECCICLSAYEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 358
>gi|18411876|ref|NP_567110.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|16648921|gb|AAL24312.1| putative protein [Arabidopsis thaliana]
gi|17978715|gb|AAL47351.1| putative protein [Arabidopsis thaliana]
gi|332646647|gb|AEE80168.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 379
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 58/285 (20%)
Query: 92 LLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS----- 146
L ++V I+I+ F S E P P+R+WI+GY++ CL + + Y++ +
Sbjct: 93 FLFVIVSIAILGF----SSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVANSPPP 148
Query: 147 ----------------QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGN 190
+ DG+S+ + +D + ++ +F +W+++G
Sbjct: 149 SGEDSSNHESLSGSEDESDGYSI-----NNTDDDDHGTSFTKHLESANTMFSFVWWIIGF 203
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYN 246
WV Q +P L+ LC++ LA++ + + L+ + +CCC+P I ++L Y
Sbjct: 204 YWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAIL-YA 262
Query: 247 MNMGAADKGASDDQISRLPSWRY------KRVDSNLEAGNSAPA--------------NE 286
+ A +GA D++I RL +++ ++V+ + +E
Sbjct: 263 L---ADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQTERMLLSE 319
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
D EC ICL Y++ E+R+LPC H FH CVD+WLRI + CPLCK
Sbjct: 320 DAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 364
>gi|414884508|tpg|DAA60522.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 359
Score = 124 bits (310), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 164/351 (46%), Gaps = 45/351 (12%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAAR----AGAPSFLIRTA-MRISRARWFNFLRRVFH 68
++S + P SPP + P R GA F+ RT R+ R
Sbjct: 14 SASPSAPLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAE 73
Query: 69 YQNGSRSDLG-SNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDI 127
+ ++D S P + L++L L +++ L+ S E P P+R+WIVGY +
Sbjct: 74 HLEERQTDWAYSKPV-----VVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVL 128
Query: 128 GCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFV 187
CLL +L + YR+ + +Q+ + ++ ++ ++ +F IW++
Sbjct: 129 QCLLHVLSVTVEYRRRRR---------NADQEGAGDEDLKLSIVKHLESANTMFSFIWWI 179
Query: 188 MGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVL 243
+G WV AP L+ L I LA++ F ++ + +CCC+P I ++L
Sbjct: 180 VGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL 239
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN---------------- 285
Y + + +GAS+D I+ L ++++ + L AG +AP
Sbjct: 240 -YAVTDQVSQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHIL 298
Query: 286 --EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK ++
Sbjct: 299 SAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDI 349
>gi|224286153|gb|ACN40787.1| unknown [Picea sitchensis]
Length = 397
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 106/363 (29%), Positives = 173/363 (47%), Gaps = 60/363 (16%)
Query: 22 SSSPPATEDRM-ARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSN 80
+ SP A++D + +R A+ GA FL R + R +R Q R S+
Sbjct: 28 TGSPNASDDGARSLSRRASIQGAARFLRRASSRRIMREPSMLVRETAAEQLEERQ---SD 84
Query: 81 PFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY 140
S + L+++ L + + T L +S+ E+P P+R+W+VGY + CLL ++ + Y
Sbjct: 85 WAYSRPVVVLDIIWNLAFVVVATVVLVLSRHENPNMPVRVWVVGYALQCLLHMICVCFEY 144
Query: 141 RQLYA------SQVDGFSLPDV------------EQQRSSE--DSRFSHLMNKCRTSL-- 178
R+ ++ S G S EQQ S + D +++ RTS+
Sbjct: 145 RRRHSNAQQQRSNSGGQSGHTNNNNNSANQQSPGEQQESDDATDEEVDEVLSTERTSIAK 204
Query: 179 ------ELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLL 228
+F IW+++G W+ AP L+ LC+ LA++ + ++
Sbjct: 205 RLESANTMFSFIWWIVGFYWISAGGQILTHDAPQLYWLCVVFLAFDVFFVVFCVALACVI 264
Query: 229 FLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS-------------- 274
+ +CCC+P I ++L Y + A +GAS++ I LP +++K +
Sbjct: 265 GIAVCCCLPCIIAIL-YAV---ADQEGASEEDIGLLPKYKFKSIGGSEKISGEKSGPFGG 320
Query: 275 --NLEAGNSAP----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 328
NL G S+ + ED ECCICL+ Y + E+R+LPCSH FH C+D+WLRI + CP
Sbjct: 321 IMNLCTGESSTERVLSAEDAECCICLSTYDDGVELRELPCSHHFHCTCIDKWLRINATCP 380
Query: 329 LCK 331
LCK
Sbjct: 381 LCK 383
>gi|226531600|ref|NP_001147541.1| protein binding protein [Zea mays]
gi|195612076|gb|ACG27868.1| protein binding protein [Zea mays]
Length = 375
Score = 123 bits (309), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 81/290 (27%), Positives = 141/290 (48%), Gaps = 46/290 (15%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+ L L I + L +S ESP P+R WI GY C++ ++ + Y Y Q
Sbjct: 81 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYCLRYG-Q 139
Query: 148 VDGFSLPDVEQ--------------QRSSEDSRFSHLMNKCR---TSLELFFAIWFVMGN 190
+ G +P E+ + SR ++ + ++ +F +W+++G
Sbjct: 140 LGGSPIPVDEESGSGSASSSSSDDDREHGSHSRSGDCLSIAKHLESANTMFSFVWWIIGF 199
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYN 246
WV + AP L+ LCI LA++ + ++ + +CCC+P I ++L Y
Sbjct: 200 YWVSAGGEVLTRDAPQLYWLCIIFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YA 258
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANE 286
++ +GAS+D I ++P +++++++ +E G + P A E
Sbjct: 259 VS---DQEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSGGIMIECGTNQPIEKVLAAE 315
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
D ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 316 DAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVRK 365
>gi|225440256|ref|XP_002283980.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Vitis
vinifera]
Length = 331
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/273 (28%), Positives = 136/273 (49%), Gaps = 46/273 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+++ L +S+ L + +E P P+R+WI GY + CLL + + ++R+
Sbjct: 76 VVLDVIWNLAFVSVSMVVLLSTFQERPSRPLRVWIFGYALQCLLHVGFVCFQFRR----- 130
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
R+ + R S ++ + + +F ++W+V G W+ Q +P L
Sbjct: 131 ------------RNGNEDRHSSIVKRLESMNTMFSSVWWVFGFCWILAGGQVLMQDSPRL 178
Query: 208 HVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 263
+ L + LA++ F + F L CC+PL + + Y M + +GAS+D I
Sbjct: 179 YWLAVVFLAFDVFFMMFCIGMACIFFFALFCCIPL--AAIAYAMKIR---EGASEDDIRL 233
Query: 264 LPSWRY------KRVDSN--------LEAGNSAPAN------EDPECCICLAKYKEKEEV 303
LP +R+ ++VD + +E G+S+ + ED ECCICL++Y + E+
Sbjct: 234 LPRYRFCDASLVRKVDDDKKQALEAAVELGSSSSISDLALHPEDSECCICLSRYVDGAEL 293
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
LPC+H FH C+ +WLRI + CPLCK + R
Sbjct: 294 YILPCNHHFHCGCISRWLRINATCPLCKFNILR 326
>gi|307135837|gb|ADN33708.1| zinc finger protein [Cucumis melo subsp. melo]
Length = 356
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 80/257 (31%), Positives = 127/257 (49%), Gaps = 37/257 (14%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-----------SQVDGFSLPDVE 157
S E P P+R+WIV Y CL+ ++L++ +++ A Q DG+ + +
Sbjct: 99 SVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQQPDGYVTNESD 158
Query: 158 QQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAW 217
+ + S S + +C + L IW++ G WV Q AP+L+ L + LA+
Sbjct: 159 EDDGGQRS-LSSVAKRCESVNTLVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAF 217
Query: 218 NALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVD 273
+ F +L L LCCC+P I ++L Y + A +GA+D +S LP +RY RV
Sbjct: 218 DVFFAVFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGATDADLSMLPKYRY-RVS 272
Query: 274 SNLEAGNS--APAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
+ G+ P ED ECCICL+ Y++ E+ LPC+H FH C+
Sbjct: 273 NEPSPGDGLMVPVETSSRYLTTERVLLREDAECCICLSPYEDGVELHALPCNHHFHYACI 332
Query: 318 DQWLRILSCCPLCKQEL 334
+WL++ + CPLCK +
Sbjct: 333 TKWLKMNATCPLCKYNI 349
>gi|6850885|emb|CAB71048.1| putative protein [Arabidopsis thaliana]
Length = 362
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 136/285 (47%), Gaps = 58/285 (20%)
Query: 92 LLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYAS----- 146
L ++V I+I+ F S E P P+R+WI+GY++ CL + + Y++ +
Sbjct: 76 FLFVIVSIAILGF----SSDEDPDVPLRLWIIGYNVQCLFHVGCVIAEYKRRRVANSPPP 131
Query: 147 ----------------QVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGN 190
+ DG+S+ + +D + ++ +F +W+++G
Sbjct: 132 SGEDSSNHESLSGSEDESDGYSI-----NNTDDDDHGTSFTKHLESANTMFSFVWWIIGF 186
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYN 246
WV Q +P L+ LC++ LA++ + + L+ + +CCC+P I ++L Y
Sbjct: 187 YWVTADTEALAQSSPQLYWLCVAFLAFDVMFVVICVAVASLIGIAVCCCLPCIIAIL-YA 245
Query: 247 MNMGAADKGASDDQISRLPSWRY------KRVDSNLEAGNSAPA--------------NE 286
+ A +GA D++I RL +++ ++V+ + +E
Sbjct: 246 L---ADQEGAPDEEIERLLKFKFLTVKNSEKVNGEIRETQGGIMTGLDTESQTERMLLSE 302
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
D EC ICL Y++ E+R+LPC H FH CVD+WLRI + CPLCK
Sbjct: 303 DAECSICLCAYEDGVELRELPCRHHFHSLCVDKWLRINATCPLCK 347
>gi|449465805|ref|XP_004150618.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
gi|449523519|ref|XP_004168771.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 356
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 128/257 (49%), Gaps = 37/257 (14%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-----------SQVDGFSLPDVE 157
S E P P+R+WIV Y CL+ ++L++ +++ A + DG+ + +
Sbjct: 99 SVHEKPNTPIRLWIVVYAAQCLVHVVLVWFEFKRRNARRARDMETQQQQEPDGYVTNESD 158
Query: 158 QQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAW 217
+ + S FS + +C + + IW++ G WV Q AP+L+ L + LA+
Sbjct: 159 EDDGGQRS-FSSVAKRCESVNTMVSLIWWLFGFYWVVAGGNILMQNAPSLYWLAVVFLAF 217
Query: 218 NALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVD 273
+ F +L L LCCC+P I ++L Y + A +GA+D +S LP +RY RV
Sbjct: 218 DVFFAVFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGATDADLSMLPKYRY-RVS 272
Query: 274 SNLEAGNS--APAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
+ G+ P ED ECCICL+ Y++ E+ LPC+H FH C+
Sbjct: 273 NEPSPGDGLMVPVETSSRYLTTERVLLCEDAECCICLSPYEDGVELHALPCNHHFHYACI 332
Query: 318 DQWLRILSCCPLCKQEL 334
+WL++ + CPLCK +
Sbjct: 333 TKWLKMNATCPLCKYNI 349
>gi|359474239|ref|XP_003631421.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Vitis vinifera]
Length = 372
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 79/254 (31%), Positives = 131/254 (51%), Gaps = 35/254 (13%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ------LYASQVDGFSLPDVEQQRSS 162
S++ESP P+R WIVGY + C+L ++ + YR+ ++ S+ DG
Sbjct: 109 SRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQ 168
Query: 163 EDS-RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALS 221
DS ++ + ++ +F IW+++G WV + +P L+ LCI L ++
Sbjct: 169 GDSSQYVTVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGFDVFF 228
Query: 222 Y----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV----- 272
+ ++ + +CCC+P I ++L Y + A +GAS + I +L +++++V
Sbjct: 229 VVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASKEDIDQLSRFKFRKVGDIEK 284
Query: 273 -DSNL---------EAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
D ++ E G AP + ED ECCICL+ Y + E+R+LPC H FH CV
Sbjct: 285 IDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFHCTCV 344
Query: 318 DQWLRILSCCPLCK 331
D+WL I + CPLCK
Sbjct: 345 DKWLYINATCPLCK 358
>gi|50253212|dbj|BAD29468.1| ring zinc finger protein-like [Oryza sativa Japonica Group]
Length = 399
Score = 123 bits (308), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 90/304 (29%), Positives = 140/304 (46%), Gaps = 64/304 (21%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I + L++S++ESP P+R+WIVGY + C+L + + YR
Sbjct: 85 VALDLLWNLAFILVAAAVLALSREESPSMPLRLWIVGYAVQCVLHMACVAIEYRMRRGQS 144
Query: 148 VDGFSLPDVEQQRSS------EDS------------------------RFSHLMNKCRTS 177
+ D E ED+ FS + C +
Sbjct: 145 GESPMAADEETGTDGSSSSSDEDAGERAPRGRNGDYVRSVGHHIFYPDNFSVHKSACSIA 204
Query: 178 LEL------FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----L 227
L F IW+++G WV AP L+ LCI LA++ F +
Sbjct: 205 KHLESANTMFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALACI 264
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN------------ 275
+ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R+D
Sbjct: 265 IGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSSG 320
Query: 276 ---LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+E G + P A ED ECCICL+ Y + E+R+LPC H FH C+D+WL I + C
Sbjct: 321 GIMIECGTNQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATC 380
Query: 328 PLCK 331
PLCK
Sbjct: 381 PLCK 384
>gi|148910158|gb|ABR18161.1| unknown [Picea sitchensis]
Length = 373
Score = 122 bits (307), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 85/284 (29%), Positives = 135/284 (47%), Gaps = 57/284 (20%)
Query: 95 LLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----RQLYAS---- 146
++V + I+T TL +E P PMR+WI GY + CLL ++ + Y RQ S
Sbjct: 86 VVVSVVILTSTL----EERPTTPMRVWIAGYALQCLLHMIYVAYEYTRRNRQRSPSVGSA 141
Query: 147 -----------QVD---GFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVW 192
QV+ G + + E R + R S + + + +F W+++G W
Sbjct: 142 GGSESASSAGEQVNSQVGRAPQEAETGRQETEER-SSIAKRLESVNTMFSFFWWIVGFYW 200
Query: 193 VFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMN 248
+ + AP L+ LCI LA++ +F ++ + +CCC+P I ++L N
Sbjct: 201 LLAGGKSLAEDAPRLYWLCIVFLAFDVFFVAFCAAVACMIGIAVCCCLPCIIAILYAVAN 260
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP---------------------ANED 287
GAS+ +I+ LP +R+ R+ + E NS ED
Sbjct: 261 ----QDGASETEINLLPKYRFCRIGPS-EKNNSEKSPSYGGVMTLICGESTSERVLGAED 315
Query: 288 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ECCICL+ Y++ E+ +LPC+H FH C+ +WLRI + CPLCK
Sbjct: 316 AECCICLSAYEDGVELYELPCNHHFHCGCIAKWLRINATCPLCK 359
>gi|356521151|ref|XP_003529221.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 352
Score = 122 bits (306), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 98/332 (29%), Positives = 150/332 (45%), Gaps = 60/332 (18%)
Query: 39 ARAG--APSFLIR-TAMRISRARWFNFLRRVFHYQNGSRSDLG-SNPFNSSTWMTLELLA 94
RAG PS L+R TA R R R+D G S P + L++
Sbjct: 38 GRAGRRGPSMLVRETAARELEER---------------RADWGYSKPV-----VALDMSW 77
Query: 95 LLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVD-GFSL 153
+ + + L+ + E P P+R+WIVGY + CL+ +LL++ YR+ G
Sbjct: 78 NMAFVVVTAVMLACTTAERPNTPIRVWIVGYALQCLVHVLLVWLEYRRRSRRDSHHGQRA 137
Query: 154 PDVEQQRSSEDSRFSH---------LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRA 204
DVE S D +S +C +W+++G WV Q A
Sbjct: 138 RDVESDAGSGDEDYSDDRDWSSGYSFTKRCELLNTGVSFLWWIVGFYWVVSGGNILLQDA 197
Query: 205 PNLHVLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQ 260
P L+ L + LA++ F +L L LCCC+P I ++L Y + A +GAS+
Sbjct: 198 PRLYWLVVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEAD 253
Query: 261 ISRLPSWRYKRVDSNLE----AGNSAPAN--------------EDPECCICLAKYKEKEE 302
+S LP +R++ + + AG+ P ED ECCICL Y++ E
Sbjct: 254 LSMLPKYRFRILSDEDKPSGGAGSMVPIETSSAYLANERTLLPEDAECCICLCSYEDGAE 313
Query: 303 VRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+ LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 314 LHALPCNHHFHSSCIVKWLKMNATCPLCKYNI 345
>gi|38344371|emb|CAE02249.2| OSJNBb0032E06.5 [Oryza sativa Japonica Group]
gi|116310006|emb|CAH67032.1| OSIGBa0139P06.5 [Oryza sativa Indica Group]
Length = 324
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 136/284 (47%), Gaps = 44/284 (15%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+LL L I++ L +S+ E P+R W+ GY + C++ ++ + YR +
Sbjct: 30 VALDLLWNLAFITVAAVVLVLSRGEDSPMPLRTWVAGYALQCVVHMVCVAIEYRMRRGQR 89
Query: 148 VDGFSLPDVEQQRS----------SEDSRFSH------LMNKCRTSLELFFAIWFVMGNV 191
+ D E+ +ED R + ++ +F IW+++G
Sbjct: 90 DRAPASADEERGSDGSSSSSDDDVTEDDRRGSCTDCVSIAKHLESANTMFSFIWWIIGFY 149
Query: 192 WVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNM 247
W+ + AP L+ LCI LA++ F ++ + +CCC+P I ++L Y +
Sbjct: 150 WISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAV 208
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANED 287
+ +GAS+D I ++P ++++R D E G + P A ED
Sbjct: 209 S---DQEGASEDDIRQIPRYKFRRTDEPEKQTADETGPFGGIMTECGTNQPIEKVLAPED 265
Query: 288 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 266 AECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCK 309
>gi|194689606|gb|ACF78887.1| unknown [Zea mays]
gi|413923427|gb|AFW63359.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 375
Score = 122 bits (306), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 46/290 (15%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+ L L I + L +S ESP P+R WI GY C++ ++ + YR Y Q
Sbjct: 81 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYRLRYG-Q 139
Query: 148 VDGFSLPDVEQ--------------QRSSEDSRFSHLMNKCR---TSLELFFAIWFVMGN 190
+ G +P E+ + SR ++ + ++ +F +W+++G
Sbjct: 140 LGGSPIPVDEESGSGSASSSSSDDDREHGSHSRSGDCLSIAKHLESANTMFSFVWWIIGF 199
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYN 246
WV + AP L+ LCI LA++ F ++ + +CCC+P I ++L Y
Sbjct: 200 YWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YA 258
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANE 286
++ +GAS+D I ++P +++++++ +E G + P A E
Sbjct: 259 VS---DQEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSGGIMIECGTNQPIEKVLAAE 315
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
D ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 316 DAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVRK 365
>gi|302758464|ref|XP_002962655.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
gi|300169516|gb|EFJ36118.1| hypothetical protein SELMODRAFT_78385 [Selaginella moellendorffii]
Length = 366
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 134/258 (51%), Gaps = 39/258 (15%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP------DVEQQRSS 162
SK+E P P+R+WIVGY + CL+ ++ + YR+ + G S P + S
Sbjct: 99 SKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVAHLSAGSES 158
Query: 163 EDSRFSHLMNKCRTSLELFFA-IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALS 221
E +H ++K S F+ +W+V+G W+ Q +P L+ L + LA++
Sbjct: 159 EIDMEAHSLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYWLSVVFLAFDVFF 218
Query: 222 Y----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-- 275
+ ++ + +CCC+P I ++L Y + A +GAS++ I+ +P ++++R S
Sbjct: 219 VVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASEEDINLIPRFKFRRSGSIDT 274
Query: 276 --LEAGNSAPA--------------------NEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+E + AP+ +ED ECCICL+ Y + E+R+LPC+H FH
Sbjct: 275 CIIEKADKAPSLGGIMALVGSSDPSSERGLSSEDAECCICLSPYDDGVELRELPCNHHFH 334
Query: 314 LKCVDQWLRILSCCPLCK 331
C+D+WLRI + CPLCK
Sbjct: 335 CSCIDKWLRINATCPLCK 352
>gi|449437970|ref|XP_004136763.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Cucumis sativus]
Length = 336
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 125/250 (50%), Gaps = 41/250 (16%)
Query: 111 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 170
+E P P+R+WI GY + CLL + ++ Y++ A GF + R++ S +
Sbjct: 99 RERPSTPLRLWISGYGLQCLLHVGFVFFEYQRSMAHH--GF------EDRTAHRS----I 146
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 226
M + + + ++W+V G W+ Q +P L+ L + LA++ F
Sbjct: 147 MKRLESMNTMTSSVWWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMAC 206
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR--------------V 272
++F LCCC+P+++ Y M +GAS++ I LP + +++ +
Sbjct: 207 VIFFSLCCCIPIVA--FAYAMT---TREGASEEDIRTLPKYTFRQAVLGTFNLGKEREPI 261
Query: 273 DSNLEAGNS------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
S +E NS A ED ECCICL++Y++ E+ LPC+H FH C+ +WLRI +
Sbjct: 262 GSTVELDNSHRIKELALHPEDSECCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINAT 321
Query: 327 CPLCKQELER 336
CPLCK + +
Sbjct: 322 CPLCKSNIRQ 331
>gi|194707262|gb|ACF87715.1| unknown [Zea mays]
gi|194708318|gb|ACF88243.1| unknown [Zea mays]
Length = 324
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 83/290 (28%), Positives = 142/290 (48%), Gaps = 46/290 (15%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+ L L I + L +S ESP P+R WI GY C++ ++ + YR Y Q
Sbjct: 30 VALDFLWNLAFILVSAVVLVLSHHESPSMPLRFWIAGYTAQCVVHMVCVAIEYRLRYG-Q 88
Query: 148 VDGFSLPDVEQ--------------QRSSEDSRFSHLMNKCR---TSLELFFAIWFVMGN 190
+ G +P E+ + SR ++ + ++ +F +W+++G
Sbjct: 89 LGGSPIPVDEESGSGSASSSSSDDDREHGSHSRSGDCLSIAKHLESANTMFSFVWWIIGF 148
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYN 246
WV + AP L+ LCI LA++ F ++ + +CCC+P I ++L Y
Sbjct: 149 YWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YA 207
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANE 286
++ +GAS+D I ++P +++++++ +E G + P A E
Sbjct: 208 VS---DQEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSGGIMIECGTNQPIEKVLAAE 264
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
D ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK + +
Sbjct: 265 DAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVRK 314
>gi|302797352|ref|XP_002980437.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
gi|300152053|gb|EFJ18697.1| hypothetical protein SELMODRAFT_112292 [Selaginella moellendorffii]
Length = 366
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 80/258 (31%), Positives = 134/258 (51%), Gaps = 39/258 (15%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP------DVEQQRSS 162
SK+E P P+R+WIVGY + CL+ ++ + YR+ + G S P + S
Sbjct: 99 SKEERPETPLRVWIVGYAVQCLVHMVCVCSEYRRRRRRILRGGSGPAENTVGHLSAGSES 158
Query: 163 EDSRFSHLMNKCRTSLELFFA-IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALS 221
E +H ++K S F+ +W+V+G W+ Q +P L+ L + LA++
Sbjct: 159 EIDMEAHSLSKRLESANTMFSFVWWVIGFYWITAGGQALTQHSPRLYWLSVVFLAFDVFF 218
Query: 222 Y----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-- 275
+ ++ + +CCC+P I ++L Y + A +GAS++ I+ +P ++++R S
Sbjct: 219 VVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASEEDINLIPRFKFRRSGSIDT 274
Query: 276 --LEAGNSAPA--------------------NEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+E + AP+ +ED ECCICL+ Y + E+R+LPC+H FH
Sbjct: 275 CIIEKADKAPSLGGIMALVGSSDPSSERGLSSEDAECCICLSPYDDGVELRELPCNHHFH 334
Query: 314 LKCVDQWLRILSCCPLCK 331
C+D+WLRI + CPLCK
Sbjct: 335 CSCIDKWLRINATCPLCK 352
>gi|18413629|ref|NP_567379.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75331789|sp|Q93Z92.1|RING4_ARATH RecName: Full=E3 ubiquitin-protein ligase At4g11680; AltName:
Full=RING finger protein At4g11680
gi|16323218|gb|AAL15343.1| AT4g11680/T5C23_110 [Arabidopsis thaliana]
gi|38564282|gb|AAR23720.1| At4g11680/T5C23_110 [Arabidopsis thaliana]
gi|66865946|gb|AAY57607.1| RING finger family protein [Arabidopsis thaliana]
gi|332657638|gb|AEE83038.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 390
Score = 122 bits (305), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 81/272 (29%), Positives = 133/272 (48%), Gaps = 34/272 (12%)
Query: 90 LELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQL----YA 145
L++L L ++I L +S+ E P P+R+W+VGY I C L + + YR+ +
Sbjct: 112 LDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHP 171
Query: 146 SQVDGFSLPDVEQQRS------SEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFG 199
G L + Q+ + S+ ++ +F IW+++G WV
Sbjct: 172 EDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQT 231
Query: 200 SFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG 255
+P L+ LCI L ++ + ++ L +CCC+P I ++L Y + A +G
Sbjct: 232 LSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---ADQEG 287
Query: 256 ASDDQISRLPSWRYKRVDS-----------NLEAGNSAPAN-----EDPECCICLAKYKE 299
AS + I ++P +R+ + + E G +P ED ECCICL +Y++
Sbjct: 288 ASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAECCICLCEYED 347
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
E+R+LPC+H FH C+D+WL I S CPLCK
Sbjct: 348 GVELRELPCNHHFHCTCIDKWLHINSRCPLCK 379
>gi|224108271|ref|XP_002314782.1| predicted protein [Populus trichocarpa]
gi|222863822|gb|EEF00953.1| predicted protein [Populus trichocarpa]
Length = 295
Score = 121 bits (304), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/249 (30%), Positives = 124/249 (49%), Gaps = 40/249 (16%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFS 168
+ KE P P+R+WI GY + CL+ ++L++ YR+ + DVE ++
Sbjct: 60 TAKERPNTPIRLWICGYSLQCLVHVILVWLEYRRRNTRRGR-----DVESEQ-------- 106
Query: 169 HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLL 228
H +C + + +W+++G WV Q AP L+ L + LA++ F +L
Sbjct: 107 HFTKRCESVNTMVSFLWWIVGFYWVVSGGDALLQNAPRLYWLAVVFLAFDVFFAIFCVVL 166
Query: 229 FLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN-----LEAG 279
L LCCC+P I ++L Y + A +GAS+ +S LP ++Y + + + AG
Sbjct: 167 ACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSILPKYKYLVMGNEEKRPRVGAG 222
Query: 280 NSAPAN--------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 325
P ED ECCICL+ Y++ E+ LPC+H FH C+ +WL++ +
Sbjct: 223 KMVPVETSSGYLSTERVLLPEDAECCICLSPYEDGAELHALPCNHHFHAMCIVKWLKMNA 282
Query: 326 CCPLCKQEL 334
CPLCK +
Sbjct: 283 TCPLCKYNI 291
>gi|148908123|gb|ABR17177.1| unknown [Picea sitchensis]
Length = 373
Score = 121 bits (303), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 84/284 (29%), Positives = 135/284 (47%), Gaps = 57/284 (20%)
Query: 95 LLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----RQLYAS---- 146
++V + I+T TL +E P P+R+WI GY + CLL ++ + Y RQ S
Sbjct: 86 VVVSVVILTSTL----EERPTTPLRVWIAGYALQCLLHMIYVAYEYTRRNRQRSPSVGSA 141
Query: 147 -----------QVD---GFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVW 192
QV+ G + + E R + R S + + + +F W+++G W
Sbjct: 142 GGSESASSAGEQVNSQVGRAPQEAETGRQETEER-SSIAKRLESVNTMFSFFWWIVGFYW 200
Query: 193 VFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMN 248
+ + AP L+ LCI LA++ +F ++ + +CCC+P I ++L N
Sbjct: 201 LLAGGKSLAEDAPRLYWLCIVFLAFDVFFVAFCAAVACMIGIAVCCCLPCIIAILYAVAN 260
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP---------------------ANED 287
GAS+ +I+ LP +R+ R+ + E NS ED
Sbjct: 261 ----QDGASETEINLLPKYRFCRIGPS-EKNNSEKSPSYGGVMTLICGESTSERVLGAED 315
Query: 288 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ECCICL+ Y++ E+ +LPC+H FH C+ +WLRI + CPLCK
Sbjct: 316 AECCICLSAYEDGVELYELPCNHHFHCGCIAKWLRINATCPLCK 359
>gi|15220639|ref|NP_176974.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
gi|12324089|gb|AAG52017.1|AC012563_27 putative RING zinc finger protein; 27623-28978 [Arabidopsis
thaliana]
gi|90093276|gb|ABD85151.1| At1g68070 [Arabidopsis thaliana]
gi|332196622|gb|AEE34743.1| C3HC4-type RING finger domain-containing protein [Arabidopsis
thaliana]
Length = 343
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 52/324 (16%)
Query: 35 NRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLG-SNPFNSSTWMTLELL 93
NR + R GA + TA + R R+D G S P + L++L
Sbjct: 35 NRASGRRGASMVVRETAAQELEER---------------RADWGYSKPV-----VALDML 74
Query: 94 ALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA----SQVD 149
+ + L + K+E P P+RIWI GY I CL+ ++L++ +R+ A ++
Sbjct: 75 WNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARSRPGDLE 134
Query: 150 GFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHV 209
+ + + D RF C + + +W+++G W+ Q A +L+
Sbjct: 135 AAQATNQDSEDEDNDERFLS-TKTCESMNTIISFVWWIVGFYWLVSGGDILLQNATHLYW 193
Query: 210 LCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 265
L LA++ F +L L LCCC+P I ++L Y + A +GAS+ +S LP
Sbjct: 194 LTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALL-YAV---AGQEGASEADLSILP 249
Query: 266 SWRYKRVDSNLE----AGNSAPAN--------------EDPECCICLAKYKEKEEVRKLP 307
+R+ ++++ + G P + ED +CCICL+ Y++ E+ LP
Sbjct: 250 KYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLP 309
Query: 308 CSHMFHLKCVDQWLRILSCCPLCK 331
C+H FH C+ +WL++ + CPLCK
Sbjct: 310 CNHHFHSTCIVKWLKMNATCPLCK 333
>gi|21536719|gb|AAM61051.1| putative RING zinc finger protein [Arabidopsis thaliana]
Length = 343
Score = 121 bits (303), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 89/324 (27%), Positives = 151/324 (46%), Gaps = 52/324 (16%)
Query: 35 NRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLG-SNPFNSSTWMTLELL 93
NR + R GA + TA + R R+D G S P + L++L
Sbjct: 35 NRASGRRGASMVVRETAAQELEER---------------RADWGYSKPV-----VALDML 74
Query: 94 ALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA----SQVD 149
+ + L + K+E P P+RIWI GY I CL+ ++L++ +R+ A ++
Sbjct: 75 WNTAFVLVAIVMLLVFKEEKPNVPIRIWICGYAIQCLVHVVLVWLEFRKRNARSRPGDLE 134
Query: 150 GFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHV 209
+ + + D RF C + + +W+++G W+ Q A +L+
Sbjct: 135 AAQATNQDSEDEDNDERFLS-TKTCESMNTIISFVWWIVGFYWLVSGGDILLQNATHLYW 193
Query: 210 LCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLP 265
L LA++ F +L L LCCC+P I ++L Y + A +GAS+ +S LP
Sbjct: 194 LTFVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALL-YAV---AGQEGASEADLSILP 249
Query: 266 SWRYKRVDSNLE----AGNSAPAN--------------EDPECCICLAKYKEKEEVRKLP 307
+R+ ++++ + G P + ED +CCICL+ Y++ E+ LP
Sbjct: 250 KYRFHTMNNDEKQSDGGGKMIPVDAASENLGNERVLLPEDADCCICLSSYEDGAELVSLP 309
Query: 308 CSHMFHLKCVDQWLRILSCCPLCK 331
C+H FH C+ +WL++ + CPLCK
Sbjct: 310 CNHHFHSTCIVKWLKMNATCPLCK 333
>gi|359474243|ref|XP_003631423.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 3
[Vitis vinifera]
Length = 392
Score = 120 bits (302), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 84/275 (30%), Positives = 139/275 (50%), Gaps = 57/275 (20%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ------LYASQVDG------------ 150
S++ESP P+R WIVGY + C+L ++ + YR+ ++ S+ DG
Sbjct: 109 SRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQ 168
Query: 151 ------FSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGS 200
+L +V++ S + +F L++ LE +F IW+++G WV
Sbjct: 169 GDSSQYVTLANVDEHHS-QTCQFLSLLSSVAKHLESANTMFSFIWWIIGFYWVSAGGQAL 227
Query: 201 FQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA 256
+ +P L+ LCI L ++ + ++ + +CCC+P I ++L Y + A +GA
Sbjct: 228 ARDSPQLYWLCIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGA 283
Query: 257 SDDQISRLPSWRYKRV------DSNL---------EAGNSAP-----ANEDPECCICLAK 296
S + I +L +++++V D ++ E G AP + ED ECCICL+
Sbjct: 284 SKEDIDQLSRFKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSA 343
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
Y + E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 344 YDDGVELRELPCGHHFHCTCVDKWLYINATCPLCK 378
>gi|224063987|ref|XP_002301335.1| predicted protein [Populus trichocarpa]
gi|222843061|gb|EEE80608.1| predicted protein [Populus trichocarpa]
Length = 378
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 84/277 (30%), Positives = 139/277 (50%), Gaps = 37/277 (13%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ----- 142
+ +++L L + I L +S +E P P R WIV Y + C ++ + YR+
Sbjct: 91 VVIDVLWSLAIVIIAVGVLGLSLEEKPRVPFRAWIVAYILLCSCHVVCVVVEYRKRRNLG 150
Query: 143 LYASQV---DGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDS-RF 198
L S + D D Q+S D + + + + +++ F IW+++G WV + R
Sbjct: 151 LRESGILSSDSGDSLDFSTQQSENDGQNTSVAKRVESAMTTFSIIWWIIGFYWVTTAGRQ 210
Query: 199 GSFQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADK 254
+ +P L+ LCI+ LA + L + L+ + +CC +P I +L Y M A +
Sbjct: 211 NVAKDSPQLYWLCIAFLAADTLFVIICIAVACLIGIAVCCFLPCIIGIL-YAM---ADQE 266
Query: 255 GASDDQISRLPSWRYKRVDS----NLEAGNS----------------APANEDPECCICL 294
GA+ ++I RL +++ R+ + N E+ S A + ED ECCICL
Sbjct: 267 GATKEEIDRLLKYKFHRIGNCEKVNDESQESFGGMMTECDTDTPIERALSREDTECCICL 326
Query: 295 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ Y++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 327 SAYEDGSELRELPCGHHFHCMCIDKWLCINATCPLCK 363
>gi|226503415|ref|NP_001151256.1| protein binding protein [Zea mays]
gi|195645358|gb|ACG42147.1| protein binding protein [Zea mays]
Length = 359
Score = 120 bits (302), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 95/341 (27%), Positives = 159/341 (46%), Gaps = 45/341 (13%)
Query: 24 SPPATEDRMARNRPAARA----GAPSFLIRTA-MRISRARWFNFLRRVFHYQNGSRSDLG 78
SPP + P R GA F+ RT R+ R + ++D
Sbjct: 24 SPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAEHLEERQTDWA 83
Query: 79 -SNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLY 137
S P + L++L L +++ L+ S E P P+R+WIVGY + CLL +L +
Sbjct: 84 YSKPV-----VVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVLQCLLHVLSVT 138
Query: 138 GRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSR 197
YR+ + +Q+ + ++ ++ ++ +F IW+++G WV
Sbjct: 139 VEYRRRRR---------NADQEGAGDEDLKLSIVKHLESANTMFSFIWWIVGFYWVSAGG 189
Query: 198 FGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAAD 253
AP L+ L I LA++ F ++ + +CCC+P I ++L Y + +
Sbjct: 190 KALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAVTDQVSQ 248
Query: 254 KGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN------------------EDPECCIC 293
+GAS+D I+ L ++++ + L AG +AP ED ECCIC
Sbjct: 249 EGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHILSAEDAECCIC 308
Query: 294 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
L Y++ E+R+LPC+H FH C+D+WL I + CPLCK ++
Sbjct: 309 LCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDI 349
>gi|357507063|ref|XP_003623820.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355498835|gb|AES80038.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 366
Score = 120 bits (301), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 73/261 (27%), Positives = 131/261 (50%), Gaps = 49/261 (18%)
Query: 111 KESPIWPMRIWIVGYDIGCLLS---LLLLYGRYRQLYASQVDGFSLPD------------ 155
+E P P+R+WI+GY + L+ ++L + R R+ + D L +
Sbjct: 102 EEEPCVPLRVWILGYLLQGLVHSVCVVLEFRRRRRGSYLEDDDSVLENGLRWSFSSESDS 161
Query: 156 --VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCIS 213
+ S E+S H+ ++ + IW+++G WV + +P L+ LCI+
Sbjct: 162 DFASEHESEENSIIKHI----ESANTILSFIWWILGFYWVTVGGQSLTKDSPQLYWLCIT 217
Query: 214 LLAWN----ALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY 269
LA++ + + L+ + +CCC+P I ++L AD+GA+ ++I +LP +++
Sbjct: 218 FLAFDVVIVVICVAVACLIGIAVCCCLPCILAIL-----YAVADQGATMEEIDQLPKYKF 272
Query: 270 KRVDSNLEAGNSAPAN-------------------EDPECCICLAKYKEKEEVRKLPCSH 310
+ + + E G++ ++ ED ECCICL+ Y + E+R+LPC+H
Sbjct: 273 RMIKESKEEGDAQESSRGVMTECDNDTASEHVIALEDAECCICLSAYDDGAELRELPCNH 332
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH C+D+WL I + CPLCK
Sbjct: 333 HFHCTCIDKWLLICATCPLCK 353
>gi|30677954|ref|NP_849924.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
gi|75299491|sp|Q8GUU2.1|RIE1_ARATH RecName: Full=E3 ubiquitin protein ligase RIE1; AltName:
Full=Protein RING-FINGER FOR EMBRYOGENESIS 1
gi|27372067|gb|AAN87884.1| RES protein [Arabidopsis thaliana]
gi|330250396|gb|AEC05490.1| E3 ubiquitin protein ligase RIE1 [Arabidopsis thaliana]
Length = 359
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/273 (28%), Positives = 132/273 (48%), Gaps = 39/273 (14%)
Query: 94 ALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY---------RQLY 144
A LV S + ++ +E P P+R+WI Y + CL ++L++ Y R L
Sbjct: 86 AALVLASAVMLVGTV--EERPNEPIRVWICVYGLQCLFHVVLVWSEYWRRNSTRRARDLE 143
Query: 145 ASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRA 204
+ + +++ +Q S ++S + +C + + IW+++G WV + A
Sbjct: 144 SYDHEDYNIEYDYEQDSDDNSTTYSFVKRCESINTVISFIWWIIGFYWVVEGGDKLLGEA 203
Query: 205 PNLHVLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQ 260
PNL+ L + LA + F +L L LCCC+P I ++L Y + A +G S+ +
Sbjct: 204 PNLYWLSVIFLAIDVFFAVFCVVLACLVGIALCCCLPCIIALL-YAV---AGTEGVSEAE 259
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPAN-------------------EDPECCICLAKYKEKE 301
+ LP +++K SN E + P ED +CCICL+ Y++
Sbjct: 260 LGVLPLYKFKAFHSN-EKNITGPGKMVPIPINGLCLATERTLLAEDADCCICLSSYEDGA 318
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
E+ LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 319 ELHALPCNHHFHSTCIVKWLKMRATCPLCKYNI 351
>gi|359474241|ref|XP_003631422.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Vitis vinifera]
Length = 383
Score = 120 bits (300), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 82/265 (30%), Positives = 133/265 (50%), Gaps = 46/265 (17%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ------LYASQVDGFSLPDVEQQRSS 162
S++ESP P+R WIVGY + C+L ++ + YR+ ++ S+ DG
Sbjct: 109 SRRESPSMPLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQ 168
Query: 163 EDS----RFSHLMNKCRTSLE--------LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVL 210
DS + L ++ TS+ +F IW+++G WV + +P L+ L
Sbjct: 169 GDSSQYVTLASLGDESSTSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWL 228
Query: 211 CISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 266
CI L ++ + ++ + +CCC+P I ++L Y + A +GAS + I +L
Sbjct: 229 CIIFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASKEDIDQLSR 284
Query: 267 WRYKRV------DSNL---------EAGNSAP-----ANEDPECCICLAKYKEKEEVRKL 306
+++++V D ++ E G AP + ED ECCICL+ Y + E+R+L
Sbjct: 285 FKFRKVGDIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELREL 344
Query: 307 PCSHMFHLKCVDQWLRILSCCPLCK 331
PC H FH CVD+WL I + CPLCK
Sbjct: 345 PCGHHFHCTCVDKWLYINATCPLCK 369
>gi|242043882|ref|XP_002459812.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
gi|241923189|gb|EER96333.1| hypothetical protein SORBIDRAFT_02g011130 [Sorghum bicolor]
Length = 357
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 76/247 (30%), Positives = 123/247 (49%), Gaps = 36/247 (14%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFS 168
S ESP P+R+WI GY + CLL +L + YR+ D +Q+ + ++
Sbjct: 110 STGESPAVPLRVWIAGYVLQCLLHILCVTVEYRRRSR---------DADQEGAGDEDFKL 160
Query: 169 HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF-- 226
++ ++ +F IW+++G WV AP L+ L I LA++ F
Sbjct: 161 SVVKHLESANTMFSFIWWIVGFYWVSAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVAL 220
Query: 227 --LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSA 282
++ + +CCC+P I ++L + +GAS+D I+ L ++++ + L AG +A
Sbjct: 221 ACVIGIAVCCCLPCIIAIL---YAVTDQQEGASEDDINNLSKFKFRTMSDADKLAAGIAA 277
Query: 283 PAN------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRIL 324
P ED ECCICL Y++ E+R+LPC+H FH C+D+WL I
Sbjct: 278 PVGGVMTECGTNPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHIN 337
Query: 325 SCCPLCK 331
+ CPLCK
Sbjct: 338 ATCPLCK 344
>gi|297741734|emb|CBI32866.3| unnamed protein product [Vitis vinifera]
Length = 241
Score = 119 bits (299), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 125/250 (50%), Gaps = 46/250 (18%)
Query: 111 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 170
+E P P+R+WI GY + CLL + + ++R+ R+ + R S +
Sbjct: 9 QERPSRPLRVWIFGYALQCLLHVGFVCFQFRR-----------------RNGNEDRHSSI 51
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 226
+ + + +F ++W+V G W+ Q +P L+ L + LA++ F
Sbjct: 52 VKRLESMNTMFSSVWWVFGFCWILAGGQVLMQDSPRLYWLAVVFLAFDVFFMMFCIGMAC 111
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRY------KRVDSN----- 275
+ F L CC+PL + + Y M + +GAS+D I LP +R+ ++VD +
Sbjct: 112 IFFFALFCCIPL--AAIAYAMKI---REGASEDDIRLLPRYRFCDASLVRKVDDDKKQAL 166
Query: 276 ---LEAGNSAPAN------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
+E G+S+ + ED ECCICL++Y + E+ LPC+H FH C+ +WLRI +
Sbjct: 167 EAAVELGSSSSISDLALHPEDSECCICLSRYVDGAELYILPCNHHFHCGCISRWLRINAT 226
Query: 327 CPLCKQELER 336
CPLCK + R
Sbjct: 227 CPLCKFNILR 236
>gi|323388655|gb|ADX60132.1| WRKY transcription factor [Zea mays]
gi|414884506|tpg|DAA60520.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 357
Score = 119 bits (299), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 96/351 (27%), Positives = 162/351 (46%), Gaps = 47/351 (13%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAAR----AGAPSFLIRTA-MRISRARWFNFLRRVFH 68
++S + P SPP + P R GA F+ RT R+ R
Sbjct: 14 SASPSAPLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAE 73
Query: 69 YQNGSRSDLG-SNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDI 127
+ ++D S P + L++L L +++ L+ S E P P+R+WIVGY +
Sbjct: 74 HLEERQTDWAYSKPV-----VVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVL 128
Query: 128 GCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFV 187
CLL +L + YR+ + +Q+ + ++ ++ ++ +F IW++
Sbjct: 129 QCLLHVLSVTVEYRRRRR---------NADQEGAGDEDLKLSIVKHLESANTMFSFIWWI 179
Query: 188 MGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVL 243
+G WV AP L+ L I LA++ F ++ + +CCC+P I ++L
Sbjct: 180 VGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL 239
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN---------------- 285
+ +GAS+D I+ L ++++ + L AG +AP
Sbjct: 240 ---YAVTDQQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHIL 296
Query: 286 --EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK ++
Sbjct: 297 SAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDI 347
>gi|449516611|ref|XP_004165340.1| PREDICTED: LOW QUALITY PROTEIN: E3 ubiquitin protein ligase
RIE1-like [Cucumis sativus]
Length = 264
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 124/250 (49%), Gaps = 41/250 (16%)
Query: 111 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 170
+E P P+R+WI GY + CLL + ++ Y++ A GF + R++ S +
Sbjct: 27 RERPSTPLRLWISGYGLQCLLHVGFVFFEYQRSMAHH--GF------EDRTAHRS----I 74
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 226
M + + + ++W+V G W+ Q +P L+ L + LA++ F
Sbjct: 75 MKRLESMNTMTSSVWWVFGFYWIVMGGQALLQDSPRLYWLTVVFLAFDLFFILFCIGMAC 134
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR--------------V 272
+ F LCCC+P+++ Y M +GAS++ I LP + +++ +
Sbjct: 135 VXFFSLCCCIPIVA--FAYAMT---TREGASEEDIRTLPKYTFRQAVLGTFNLGKEREPI 189
Query: 273 DSNLEAGNS------APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
S +E NS A ED ECCICL++Y++ E+ LPC+H FH C+ +WLRI +
Sbjct: 190 GSTVELDNSHRIKELALHPEDSECCICLSRYEDGTELYTLPCNHHFHCGCIAKWLRINAT 249
Query: 327 CPLCKQELER 336
CPLCK + +
Sbjct: 250 CPLCKSNIRQ 259
>gi|449460475|ref|XP_004147971.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Cucumis
sativus]
Length = 383
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 80/275 (29%), Positives = 135/275 (49%), Gaps = 46/275 (16%)
Query: 99 ISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL---YGRYRQL----YASQVDGF 151
+ + L +S+ ESP P+R+WIVGY C+L ++ + Y R RQL ++S +G
Sbjct: 99 VVVAATILVLSRNESPSMPLRLWIVGYAFQCILHMVCVCVEYRRRRQLRYSAFSSMEEGN 158
Query: 152 SLPDVEQQRSSEDSRF-----------SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 200
S + S +S S + ++ +F IW+++G WV
Sbjct: 159 SARSISGLGSRANSSHYVSLAQLDENDSSVAKHLESANTMFSFIWWIIGFYWVSAGGQSL 218
Query: 201 FQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA 256
Q +P L+ LCI L ++ + ++ + +CCC+P I ++L Y + A +GA
Sbjct: 219 AQASPLLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALL-YAV---ADQEGA 274
Query: 257 SDDQISRLPSWRYKRVDSNL---------------EAGNSAPA-----NEDPECCICLAK 296
+ + + +L +++++V++ E +P ED ECCICL+
Sbjct: 275 TKEDVEQLSKFKFRKVENTEKFSTDVQEPLGGVMSECCTDSPIERPLLQEDAECCICLSA 334
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
Y++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 335 YEDGVELRELPCGHHFHCACVDKWLYINATCPLCK 369
>gi|194700864|gb|ACF84516.1| unknown [Zea mays]
gi|414884507|tpg|DAA60521.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 356
Score = 119 bits (298), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 97/351 (27%), Positives = 163/351 (46%), Gaps = 48/351 (13%)
Query: 14 NSSTTVPYSSSPPATEDRMARNRPAAR----AGAPSFLIRTA-MRISRARWFNFLRRVFH 68
++S + P SPP + P R GA F+ RT R+ R
Sbjct: 14 SASPSAPLIPSPPTSPASGPSGGPLGRLTSLRGAARFIRRTGSRRLMREPSVAVRETAAE 73
Query: 69 YQNGSRSDLG-SNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDI 127
+ ++D S P + L++L L +++ L+ S E P P+R+WIVGY +
Sbjct: 74 HLEERQTDWAYSKPV-----VVLDMLWNLAFVAVAAAVLAASVGERPTVPLRVWIVGYVL 128
Query: 128 GCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFV 187
CLL +L + YR+ + +Q+ + ++ ++ ++ +F IW++
Sbjct: 129 QCLLHVLSVTVEYRRRRR---------NADQEGAGDEDLKLSIVKHLESANTMFSFIWWI 179
Query: 188 MGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVL 243
+G WV AP L+ L I LA++ F ++ + +CCC+P I ++L
Sbjct: 180 VGFYWVSAGGKALSHDAPQLYWLSIVFLAFDVFFVVFCVALACVIGIAVCCCLPCIIAIL 239
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN---------------- 285
Y + +GAS+D I+ L ++++ + L AG +AP
Sbjct: 240 -YAVT---DQEGASEDDINNLSKFKFQTMSDADKLAAGIAAPVGGVMTECGTNPPVEHIL 295
Query: 286 --EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK ++
Sbjct: 296 SAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCKFDI 346
>gi|356530111|ref|XP_003533627.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 369
Score = 119 bits (297), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 41/270 (15%)
Query: 99 ISIITFTLSISKKESPIWPMRIWIVGYDI-GCLLSLLLLYGRYRQLYASQVDG-FSLPDV 156
++I L++S E P P+R WIVGY + G L SL ++ R+ + + G S +V
Sbjct: 91 LAIGASVLALSADEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRTATISGTHSGSNV 150
Query: 157 EQQRSSE-DSRF-----------SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRA 204
E SSE D F + + ++ + IW+++G WV + +
Sbjct: 151 EWSFSSESDEEFYPSEQFLEGDGNSITKHIESANTMLSFIWWIVGFYWVTAGGQSLTRDS 210
Query: 205 PNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQ 260
P L+ LCI+ L+++ + + L+ + +CCC+P I ++L + A +GA+ ++
Sbjct: 211 PQLYWLCITFLSFDVMIVLICVAVACLIGIAVCCCLPCILAIL----YVVADQEGATKEE 266
Query: 261 ISRLPSWRYK-----RVDSNLE--------------AGNSAPANEDPECCICLAKYKEKE 301
I +LP +++ + + ++E A A ED ECCICL+ Y +
Sbjct: 267 IEQLPKYKFIIIKEFKKEGDIEESSRGIMTESESETATEHVIALEDAECCICLSAYDDGA 326
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
E+R+LPC+H FH C+D+WL I + CPLCK
Sbjct: 327 ELRELPCNHHFHCTCIDKWLLINATCPLCK 356
>gi|356514046|ref|XP_003525718.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 380
Score = 118 bits (296), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 79/268 (29%), Positives = 129/268 (48%), Gaps = 51/268 (19%)
Query: 108 ISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQ--------------------LYASQ 147
+S+ E+P P+R+WIVGY + C+L + + Y++ L
Sbjct: 106 LSRNENPNMPLRLWIVGYALQCVLHVACVCVEYQRRLRRREQSNAAAIAGGGSGDLGPPS 165
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
+DG Q + + + T +F IW+V+G WV + +P L
Sbjct: 166 MDGSGHYVSLAQFDDDGISMAKHLESANT---MFSFIWWVVGFYWVSADSESLVRDSPLL 222
Query: 208 HVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 263
+ LCI+ L ++ F ++ + +CCC+P I ++L Y + A +GAS + I +
Sbjct: 223 YWLCIAFLGFDVFFVVFCMALACIVGIAVCCCLPCIIALL-YAV---ADQEGASKEDIEQ 278
Query: 264 LPSWRYKRVDSNLE-AGNSAPA-------------------NEDPECCICLAKYKEKEEV 303
L ++++R ++N + AGN+ A +ED ECCICL+ Y + E+
Sbjct: 279 LSKFKFQRTETNEKLAGNTQGAAGGIMIECDADSPIEHVLSDEDAECCICLSAYDDGVEL 338
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCK 331
R+LPC H FH CVD+WL I + CPLCK
Sbjct: 339 RQLPCGHHFHCACVDKWLHINATCPLCK 366
>gi|359472593|ref|XP_002281277.2| PREDICTED: uncharacterized protein LOC100261060 [Vitis vinifera]
Length = 2299
Score = 118 bits (296), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 96/335 (28%), Positives = 151/335 (45%), Gaps = 63/335 (18%)
Query: 35 NRPAARAGAPSFLIR-TAMRISRARWFNFLRRVFHYQNGSRSDLG-SNPFNSSTWMTLEL 92
R R G PS L+R TA R R R+D G S P + L++
Sbjct: 1980 GRATGRRG-PSMLVRETAARELEER---------------RADWGYSKPV-----VALDM 2018
Query: 93 LALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-----------R 141
+ + + + L + +E P P+R+WI GY + C + ++L++ Y
Sbjct: 2019 MWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEE 2078
Query: 142 QLYASQVDGFSLPDVEQQ--RSSEDSRF--SHLMNKCRTSLELFFAIWFVMGNVWVFDSR 197
Q Q + D E + SS F S + +C + + +W+++G WV
Sbjct: 2079 QQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGG 2138
Query: 198 FGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAAD 253
Q AP L+ L + LA++ F +L L LCCC+P I ++L Y + A
Sbjct: 2139 EALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQ 2194
Query: 254 KGASDDQISRLPSWRYK---RVDSNLEAGNSAPAN--------------EDPECCICLAK 296
+GAS+ +S LP +R++ S + AG P ED ECCICL+
Sbjct: 2195 EGASEADLSMLPRYRFEANNEEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICLSS 2254
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
Y++ E+ LPC+H FH C+ +WL++ + CPLCK
Sbjct: 2255 YEDGAELHALPCNHHFHSTCIAKWLKMNATCPLCK 2289
>gi|413923908|gb|AFW63840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 364
Score = 118 bits (295), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 105/365 (28%), Positives = 162/365 (44%), Gaps = 55/365 (15%)
Query: 4 RYSFPSDSLCNSSTTVPYSSSPPATEDRMAR-NRPAARAGAPSFLIRTAMRISRARWFNF 62
R S PS + + +V SS PP+ AR +R AA G + +M + A
Sbjct: 14 RRSSPSSNTNADADSVNLSSPPPSA----ARPSRLAALIGRVGWPRGPSMMVHEATTLQL 69
Query: 63 LRRVFHYQNGSRSDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWI 122
RR R+D +S +TL++ + + L+ S K+SP+ P+R+W+
Sbjct: 70 HRR--------RADWA----HSRPVVTLDIAWNVACAAAAALVLASSAKDSPVKPLRLWL 117
Query: 123 VGYDIGCLLSLLLLYGRY----RQLY--ASQVDGFSLPDVEQQRSSED-----SRFSHLM 171
VGY CL+ + +++ R R + AS V+ SED R SH
Sbjct: 118 VGYAAQCLVHVGIVFTRLETRARHAWGPASDVESAGAGTDSSGTDSEDDETAEGRSSH-A 176
Query: 172 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----L 227
++C T L +W+++G W+ AP L+ L I LA++ F
Sbjct: 177 SRCETINRLISFLWWIIGFYWLVSGGEVLEYGAPRLYWLTIVFLAFDVFFAVFCVAMSCF 236
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV--------------- 272
+ + LCCC+P + ++L Y + A GASD IS LP +RY
Sbjct: 237 IGIALCCCLPCVVAIL-YAL---AGKVGASDGDISVLPRYRYYDPSEDSEEETDEGLMIP 292
Query: 273 ---DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 329
+S + ED ECC+CL+ Y++ E+ LPC H FH C+ WLR+ + CPL
Sbjct: 293 ILNNSGMSTSERILLREDAECCVCLSSYEDGAELSALPCRHHFHWSCITTWLRMNATCPL 352
Query: 330 CKQEL 334
CK +
Sbjct: 353 CKYNI 357
>gi|356568312|ref|XP_003552356.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like [Glycine max]
Length = 375
Score = 117 bits (294), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 81/280 (28%), Positives = 134/280 (47%), Gaps = 44/280 (15%)
Query: 97 VQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFS---- 152
V ++I L++S E P P+R WIVGY + L L + + + +V G
Sbjct: 92 VFLAIGASVLALSTDEDPCVPLRAWIVGYLLQGALHSLCVVAEFTRRRRRRVSGTHPGSN 151
Query: 153 -LPDVEQQRSSE-DSRF-----------SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFG 199
+ V+ SSE D F + + T + IW+++G WV
Sbjct: 152 VVGHVQWSFSSESDEEFYPPEQFLEGDGNSITKHIETVNTMLSFIWWIVGFYWVTAGGQS 211
Query: 200 SFQRAPNLHVLCISLLAWNA----LSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG 255
+ +P L+ LCI+ LA++ + S L+ + +CCC+P I ++L + A +G
Sbjct: 212 LTRDSPQLYWLCITFLAFDVVIVLICVSVACLIGIAVCCCLPCILAIL----YVVADPEG 267
Query: 256 ASDDQISRLPSWRYKRV-----DSNLE--------------AGNSAPANEDPECCICLAK 296
A+ ++I +LP ++++ + + ++E A A ED ECCICL+
Sbjct: 268 ATKEEIDQLPKYKFRIIKEFKKEGDIEESSRGIMTETESETAAEHVIALEDAECCICLSA 327
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
Y E+R+LPC+H FH C+D+WL I + CPLCK + R
Sbjct: 328 YDNDAELRELPCNHHFHCTCIDKWLLINATCPLCKFNILR 367
>gi|357481703|ref|XP_003611137.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355512472|gb|AES94095.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|388506770|gb|AFK41451.1| unknown [Medicago truncatula]
Length = 387
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 82/285 (28%), Positives = 131/285 (45%), Gaps = 60/285 (21%)
Query: 99 ISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY------------------ 140
+ + L +S+ E+P P+R+WI GY + C+L ++ + Y
Sbjct: 97 VIVAGTALFLSRNEAPEMPLRLWIAGYVLQCVLHMVCVCFEYRRRRRFQRSSSSNAVAGS 156
Query: 141 ----------RQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGN 190
R+ S V G S + Q S HL ++ +F IW+++G
Sbjct: 157 DRIGSGNFSSREGSRSAVSGSSYVSLAQFDEESTSVAKHL----ESANTMFSFIWWIIGF 212
Query: 191 VWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYN 246
WV Q +P L+ LCI L ++ + ++ + +CCC+P I ++L Y
Sbjct: 213 YWVSAGGQALAQDSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIALL-YA 271
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSNLEA--GNSAP------------------ANE 286
+ A +GAS + I +L +++++V+SN + N P A E
Sbjct: 272 V---ADQEGASKEDIEQLSKFKFRKVESNEKQTDNNQGPVGGIMTECRADSPIEHVLAEE 328
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
D ECCICL+ Y + E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 329 DAECCICLSSYDDGVELRELPCGHHFHCACVDKWLYINATCPLCK 373
>gi|147769549|emb|CAN61404.1| hypothetical protein VITISV_014258 [Vitis vinifera]
Length = 361
Score = 117 bits (293), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 95/334 (28%), Positives = 150/334 (44%), Gaps = 63/334 (18%)
Query: 35 NRPAARAGAPSFLIR-TAMRISRARWFNFLRRVFHYQNGSRSDLG-SNPFNSSTWMTLEL 92
R R G PS L+R TA R R R+D G S P + L++
Sbjct: 36 GRATGRRG-PSMLVRETAARELEER---------------RADWGYSKPV-----VALDM 74
Query: 93 LALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-----------R 141
+ + + + L + +E P P+R+WI GY + C + ++L++ Y
Sbjct: 75 MWNMSFVIVSIVMLICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRSRRRVRDEE 134
Query: 142 QLYASQVDGFSLPDVEQQ--RSSEDSRF--SHLMNKCRTSLELFFAIWFVMGNVWVFDSR 197
Q Q + D E + SS F S + +C + + +W+++G WV
Sbjct: 135 QQQQPQHSDSDVNDSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGG 194
Query: 198 FGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAAD 253
Q AP L+ L + LA++ F +L L LCCC+P I ++L Y + A
Sbjct: 195 EALLQNAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQ 250
Query: 254 KGASDDQISRLPSWRYK---RVDSNLEAGNSAPAN--------------EDPECCICLAK 296
+GAS+ +S LP +R++ S + AG P ED ECCICL+
Sbjct: 251 EGASEADLSMLPRYRFEANNEEKSGVGAGTMFPTETSSGYLANERILLPEDAECCICLSS 310
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
Y++ E+ LPC+H FH C+ +WL++ + CPLC
Sbjct: 311 YEDGAELHALPCNHHFHSTCIAKWLKMNATCPLC 344
>gi|356499571|ref|XP_003518612.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 357
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 100/362 (27%), Positives = 160/362 (44%), Gaps = 55/362 (15%)
Query: 15 SSTTVPYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSR 74
SS T P + P T +R A R AP+ + R R
Sbjct: 2 SSQTAPTEAPEPYTPLLRSRTD-AGRGPAPALALLLGRAGRRGPSMLVRETAARELEERR 60
Query: 75 SDLGSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLL 134
+D G + + M+ + ++V +++ T S E P P+R+WIVGY + CL+ +L
Sbjct: 61 ADWGYSKPVVALDMSWNMAFVVVSAAMLACTTS----EHPTTPIRVWIVGYALQCLVHVL 116
Query: 135 LLYGRYRQLYASQVDGFSLP--DVEQQR-----------------SSEDSRFSHLMNKCR 175
L++ YR+ S DVE ++ SRF+
Sbjct: 117 LVWLEYRRRSRRDSRSGSQRARDVESDAGSGDDDDYSDDGDGSSGNTSRSRFAKRCESLN 176
Query: 176 TSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLL---- 231
T + +W+++G WV Q AP L+ L + LA++ F +L L
Sbjct: 177 TGVSF---LWWIVGFYWVVSGGDILLQDAPRLYWLAVVFLAFDVFFAIFCVVLACLIGIA 233
Query: 232 LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLE-----AGNSAPAN- 285
LCCC+P I ++L Y + A +GAS+ +S LP +++ R+ S+++ AG+ P
Sbjct: 234 LCCCLPCIIAIL-YAV---AGQEGASEADLSMLPKYKF-RILSDVDKPSGGAGSMVPIET 288
Query: 286 -------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
ED ECCICL Y++ E+ LPC+H FH C+ +WL++ + CPLCK
Sbjct: 289 SSAYLENERTLLLEDAECCICLCSYEDGAELHALPCNHHFHSSCIVKWLKMNATCPLCKY 348
Query: 333 EL 334
+
Sbjct: 349 NI 350
>gi|357122910|ref|XP_003563156.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 2
[Brachypodium distachyon]
Length = 362
Score = 117 bits (292), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 27/244 (11%)
Query: 112 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLM 171
E P P+R W+ GY + CLL +L + Y++ G + V+Q + + ++
Sbjct: 109 ERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCREARSGGA--GVDQDDAGDGDLKISIV 166
Query: 172 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----L 227
+ +F IW+++G WV Q AP L+ L I LA++ F +
Sbjct: 167 KHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVALACV 226
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN 285
+ + +CCC+P I ++L Y + +GAS++ I+ L ++++ + L AG +AP
Sbjct: 227 IGIAVCCCLPCIIAIL-YAVTDQVCQEGASEEDINNLSKYKFRTMGEADKLVAGIAAPVG 285
Query: 286 ------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + C
Sbjct: 286 GVMTECGTNPPVEHILSAEDAECCICLCPYEDGTELRELPCNHHFHCTCIDKWLHINATC 345
Query: 328 PLCK 331
PLCK
Sbjct: 346 PLCK 349
>gi|356539808|ref|XP_003538385.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 387
Score = 115 bits (289), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 80/293 (27%), Positives = 137/293 (46%), Gaps = 53/293 (18%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLY--- 144
+ L+++ L + + L +S E+P P+R+WIVGY + C+L ++ + YR+
Sbjct: 85 VVLDIVWNLAFVVVAGTVLVLSASEAPGMPLRLWIVGYAMQCVLHMVFVCVEYRRRRRQQ 144
Query: 145 ---ASQV----------------DGFSLPDVEQQR---SSEDSRFSHLMNKCRTSLELFF 182
AS V +G + Q D + + ++ +F
Sbjct: 145 PAAASSVQDRVGSSSGNLSVSSREGSASASASAQNVLLGQLDDESTSVAKHLESANTMFS 204
Query: 183 AIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPL 238
+W+++G WV Q +P L+ LCI L ++ + ++ + +CCC+P
Sbjct: 205 FVWWIIGFYWVSAGGQALAQDSPQLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPC 264
Query: 239 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNS----------------- 281
I ++L Y + +GAS + I +L ++++R++SN + +
Sbjct: 265 IIALL-YAVT---DQEGASKEDIEQLSKFKFRRIESNEKLTGTIQGPVGGIMTECQADSP 320
Query: 282 ---APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
A A ED ECCICL+ Y + E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 321 IEHALAEEDAECCICLSSYDDGVELRELPCGHHFHCVCVDKWLYINATCPLCK 373
>gi|297838553|ref|XP_002887158.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
gi|297332999|gb|EFH63417.1| hypothetical protein ARALYDRAFT_475916 [Arabidopsis lyrata subsp.
lyrata]
Length = 344
Score = 115 bits (288), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 137/274 (50%), Gaps = 38/274 (13%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L++L + + L + K+E P P+R+WI GY I CL+ ++L++ +R+ A
Sbjct: 69 VALDMLWNTAFVVVAIVMLLVFKEEKPNVPIRVWICGYAIQCLVHVVLVWLEFRKRNART 128
Query: 148 VDGFSLPDVEQQRSS-------EDSRFSHLMNK-CRTSLELFFAIWFVMGNVWVFDSRFG 199
G D+E + S ED+ L K C + + IW++ G W+
Sbjct: 129 RTG----DLEAAQGSGNHDSEDEDNDERILSTKTCESMNTIISFIWWIAGFYWLVSGGDI 184
Query: 200 SFQRAPNLHVLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKG 255
Q A +L+ L LA++ F +L L LCCC+P I ++L Y + A +G
Sbjct: 185 LLQNATHLYWLTFIFLAFDVFFAIFCVVLACLIGIALCCCLPCIIALL-YAV---AGQEG 240
Query: 256 ASDDQISRLPSWRYKRVDSN------------LEAGNSAPANE------DPECCICLAKY 297
AS+ +S LP +R++ ++++ +EAG+ E D +CCICL+ Y
Sbjct: 241 ASEADLSILPKYRFQALNNDEKQSDGGGKMIPVEAGSENMGKERVLLPEDADCCICLSSY 300
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
++ E+ L C+H FH C+ +WL++ + CPLCK
Sbjct: 301 EDGAELVSLSCNHHFHSTCIVKWLKMNATCPLCK 334
>gi|18407748|ref|NP_564810.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|122064956|sp|Q8LDB8.2|RING2_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g63170; AltName:
Full=RING finger protein At1g63170
gi|12323245|gb|AAG51597.1|AC010795_1 hypothetical protein; 76801-78300 [Arabidopsis thaliana]
gi|332195943|gb|AEE34064.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 381
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA---------------------SQ 147
S E+P P+R+WI+GY + C++ ++ + YR+ + +
Sbjct: 96 SSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDE 155
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGSFQR 203
+G L +R E + + N LE + IW+V+G WV Q
Sbjct: 156 EEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQG 215
Query: 204 APNLHVLCI----SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 259
+P L+ LCI + + + ++ + +CCC+P I +VL Y + A +GAS +
Sbjct: 216 SPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---AEQEGASKE 271
Query: 260 QISRLPSWRYKRVDSNL------------------EAGNSAPA-----NEDPECCICLAK 296
I +L +++++V + E G +P +ED ECCICL+
Sbjct: 272 DIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSA 331
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
Y+++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 332 YEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>gi|21554228|gb|AAM63303.1| unknown [Arabidopsis thaliana]
Length = 381
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA---------------------SQ 147
S E+P P+R+WI+GY + C++ ++ + YR+ + +
Sbjct: 96 SSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDE 155
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGSFQR 203
+G L +R E + + N LE + IW+V+G WV Q
Sbjct: 156 EEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQG 215
Query: 204 APNLHVLCI----SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 259
+P L+ LCI + + + ++ + +CCC+P I +VL Y + A +GAS +
Sbjct: 216 SPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---AEQEGASKE 271
Query: 260 QISRLPSWRYKRVDSNL------------------EAGNSAPA-----NEDPECCICLAK 296
I +L +++++V + E G +P +ED ECCICL+
Sbjct: 272 DIDQLTKFKFRKVGDTMKHTVDEEQGEGDSGGVMTECGTDSPVEHALPHEDAECCICLSA 331
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
Y+++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 332 YEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>gi|226501326|ref|NP_001149757.1| LOC100283384 [Zea mays]
gi|195632056|gb|ACG36686.1| protein binding protein [Zea mays]
gi|413938751|gb|AFW73302.1| putative RING zinc finger domain superfamily protein isoform 1 [Zea
mays]
gi|413938752|gb|AFW73303.1| putative RING zinc finger domain superfamily protein isoform 2 [Zea
mays]
Length = 367
Score = 114 bits (286), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 101/352 (28%), Positives = 155/352 (44%), Gaps = 66/352 (18%)
Query: 23 SSPPATEDRMAR-----NRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDL 77
+SPP + R +R R A R G PS L+R + R R+D
Sbjct: 35 ASPPPSAVRPSRLAALIGRAAGRRG-PSMLVRETAALQLQR--------------RRADW 79
Query: 78 GSNPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLY 137
+S + L++ + + LS S +ESP+ P+R+W+VGY CL+ + L+
Sbjct: 80 A----HSRPVLALDIAWNVAFAAAAAAVLSSSAEESPVKPLRLWVVGYAAQCLVHVGLVC 135
Query: 138 GRYRQLYASQVDGFSLPDVEQQRSS-------------EDSRFSHLMNKCRTSLELFFAI 184
R+ S DVE + + R S+ +C T L +
Sbjct: 136 ADTRRETRRARRSAS--DVESAGAGTDSSDADSEDDERAEGRSSY-TGRCETMNTLISFL 192
Query: 185 WFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLIS 240
W+++G W+F AP L+ L I LA++ F + + LCCC+P +
Sbjct: 193 WWIIGFYWIFSGGEVLEHGAPRLYWLTIVFLAFDVFFAVFCVAVACFIGIALCCCLPCVI 252
Query: 241 SVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAG-----------NSAPAN---- 285
++L Y + A +GASD IS L +RY + E G NS +
Sbjct: 253 AIL-YAL---AGQEGASDADISVLLRYRYSDPSEDGEKGVDEGLMIPILNNSGMSTSERI 308
Query: 286 ---EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED ECCICL+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK +
Sbjct: 309 LLREDAECCICLSSYEDGAELSALPCNHHFHWPCITKWLRMNATCPLCKYNI 360
>gi|16604388|gb|AAL24200.1| At1g63170/F16M19_7 [Arabidopsis thaliana]
Length = 381
Score = 114 bits (286), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 128/275 (46%), Gaps = 56/275 (20%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA---------------------SQ 147
S E+P P+R+WI+GY + C++ ++ + YR+ + +
Sbjct: 96 SSDENPNMPLRVWIIGYGLQCMMHMVCVCVEYRRRNSRRRRDLSPRSSSSSSSSSSSMDE 155
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLE----LFFAIWFVMGNVWVFDSRFGSFQR 203
+G L +R E + + N LE + IW+V+G WV Q
Sbjct: 156 EEGLGLSRNSDERYLELGQLENENNSFAKHLESANTMISFIWWVIGFYWVSSGGQELAQG 215
Query: 204 APNLHVLCI----SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 259
+P L+ LCI + + + ++ + +CCC+P I +VL Y + A +GAS +
Sbjct: 216 SPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIAVL-YAV---AEQEGASKE 271
Query: 260 QISRLPSWRYKRVDSNL------------------EAGNSAPA-----NEDPECCICLAK 296
I +L +++++V + E G +P +ED ECCICL+
Sbjct: 272 DIDQLTKFKFRKVGDTMKHTVDEEQGQGDSGGVMTECGTDSPVEHALPHEDAECCICLSA 331
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
Y+++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 332 YEDETELRELPCGHHFHCGCVDKWLYINATCPLCK 366
>gi|297844168|ref|XP_002889965.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
gi|297335807|gb|EFH66224.1| protein binding protein [Arabidopsis lyrata subsp. lyrata]
Length = 335
Score = 114 bits (285), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 82/296 (27%), Positives = 140/296 (47%), Gaps = 56/296 (18%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+++ L +S+ T L +S+ E PI P+R+W++GY + C+L ++ + YR+ +
Sbjct: 30 VVLDIVWNLAFVSVATAILVMSRNEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 89
Query: 148 VD-------------------------GFSLPDVEQQRS--SEDSRFSHLMNKCRTSLEL 180
+ G EQ S D+ S + ++ +
Sbjct: 90 TNRTTTTPRSRSSSSSSSSSSLEEDALGSRRNSGEQDLSLGHLDTESSSVAKHLESANTM 149
Query: 181 FFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCV 236
F IW+++G WV Q +P ++ L I L ++ + ++ + +CCC+
Sbjct: 150 FSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACVIGIAVCCCL 209
Query: 237 PLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV-DSNLEAGNSAPA----------- 284
P I +VL Y + A +GAS + I +L +++++V D+N G+ A
Sbjct: 210 PCIIAVL-YAV---ADQEGASKEDIEQLTKFKFRKVGDANRHTGDEAQGTTEGIMTECGT 265
Query: 285 ---------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED ECCICL+ Y++ E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 266 DSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINATCPLCK 321
>gi|79342958|ref|NP_172736.2| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|75335230|sp|Q9LN71.1|RING1_ARATH RecName: Full=E3 ubiquitin-protein ligase At1g12760; AltName:
Full=RING finger protein At1g12760
gi|9502381|gb|AAF88088.1|AC025417_16 T12C24.29 [Arabidopsis thaliana]
gi|22531064|gb|AAM97036.1| unknown protein [Arabidopsis thaliana]
gi|23198142|gb|AAN15598.1| unknown protein [Arabidopsis thaliana]
gi|67037431|gb|AAY63561.1| RING domain protein [Arabidopsis thaliana]
gi|332190803|gb|AEE28924.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 408
Score = 114 bits (284), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 72/305 (23%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-- 145
+ L+++ L +S+ T L +S+KE PI P+R+W++GY + C+L ++ + YR+
Sbjct: 101 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 160
Query: 146 ----------------------------------SQVDGFSLPDVEQQRSSEDSRFSHLM 171
S V SL ++ + SS +
Sbjct: 161 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSS-------VA 213
Query: 172 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFL 227
++ +F IW+++G WV Q +P ++ L I L ++ + +
Sbjct: 214 KHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACV 273
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV-DSN----------- 275
+ + +CCC+P I +VL Y + A +GAS + I +L ++++++ D+N
Sbjct: 274 IGIAVCCCLPCIIAVL-YAV---ADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTT 329
Query: 276 ----LEAGNSAPA-----NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
E G +P ED ECCICL+ Y++ E+R+LPC H FH CVD+WL I +
Sbjct: 330 EGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINAT 389
Query: 327 CPLCK 331
CPLCK
Sbjct: 390 CPLCK 394
>gi|357138212|ref|XP_003570691.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Brachypodium
distachyon]
Length = 366
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 95/350 (27%), Positives = 155/350 (44%), Gaps = 50/350 (14%)
Query: 20 PYSSSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGS 79
PY+ + + A PAAR PS L R + R + L R R +
Sbjct: 20 PYAGAASGPGNHQASPPPAAR---PSRLAALIGRAAGRRGPSMLVRETAALQLERRR--A 74
Query: 80 NPFNSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGR 139
+ +S + L++ + + L+ S ESP P+R+W+VGY + C++ + L+
Sbjct: 75 DWAHSRPVVALDVAWNVAFAAAAAAVLAASAAESPAKPLRLWLVGYALQCVVHVSLVCSG 134
Query: 140 YRQLYASQVDGFSLPDVEQQRSSE----------------DSRFSHLMNKCRTSLELFFA 183
+ + DVE ++ D R S + +C + L
Sbjct: 135 PGRRRRAARARGP--DVESDAANAGPDGSGSEDDDDEEAMDERSSSV-ERCESVNTLVSF 191
Query: 184 IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLI 239
+W+++G WV Q AP L+ L + LA++ F + + LCCC+P +
Sbjct: 192 LWWIIGFYWVVSGGDMLEQGAPRLYWLTVVFLAFDVFFAVFCVAVACFIGVALCCCLPCV 251
Query: 240 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAG-----------NSAPA---- 284
++L Y + +GASD I LP ++Y + ++E G NS +
Sbjct: 252 VAIL-YAL---VGQEGASDADIGVLPRYKYSVANEDVEKGTDEGLMIPILNNSGASTSER 307
Query: 285 ---NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
NED ECCICL+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK
Sbjct: 308 ILLNEDAECCICLSSYEDGVELSALPCNHHFHSTCITKWLRMHATCPLCK 357
>gi|326489597|dbj|BAK01779.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 367
Score = 113 bits (283), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 76/257 (29%), Positives = 123/257 (47%), Gaps = 44/257 (17%)
Query: 112 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL- 170
ESP P+R+W+VGY + C++ + L+ R+ A+ G PD+E ++ + S
Sbjct: 109 ESPGKPLRLWLVGYALQCVVHVSLVCSGSRRRPAAPARG---PDIESGAATAGANSSESD 165
Query: 171 --------------MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 216
++C + + +W+++G WV Q AP L+ L + LA
Sbjct: 166 EGNDEEAMEERASSTDRCESVNTMVSFLWWIIGFYWVVTGGDVLEQGAPRLYWLTVVFLA 225
Query: 217 WNALSYSFPFL----LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV 272
++ F + + + LCCC+P + ++L Y + +GASD I LP ++Y
Sbjct: 226 FDVFFAVFCVVVACFIGVALCCCLPCVVAIL-YAL---VGQEGASDADIGVLPRYKYSDP 281
Query: 273 DSNLEAG-----------NSAPAN-------EDPECCICLAKYKEKEEVRKLPCSHMFHL 314
N E G NS + ED ECCICL+ Y++ E+ LPC+H FH
Sbjct: 282 SENGEKGTDEGVMIPILNNSGTSTSERILLREDAECCICLSSYEDGVELSALPCNHHFHS 341
Query: 315 KCVDQWLRILSCCPLCK 331
C+ +WLR+ + CPLCK
Sbjct: 342 MCITKWLRMHANCPLCK 358
>gi|357122908|ref|XP_003563155.1| PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform 1
[Brachypodium distachyon]
Length = 359
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 121/244 (49%), Gaps = 30/244 (12%)
Query: 112 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLM 171
E P P+R W+ GY + CLL +L + Y++ G + V+Q + + ++
Sbjct: 109 ERPAVPLRFWLAGYVLQCLLHVLCVAVEYKRRCREARSGGA--GVDQDDAGDGDLKISIV 166
Query: 172 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----L 227
+ +F IW+++G WV Q AP L+ L I LA++ F +
Sbjct: 167 KHLESGNTMFSFIWWIIGFYWVSAGGQTLSQDAPQLYWLSIVFLAFDVFFVVFCVALACV 226
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN 285
+ + +CCC+P I ++L Y + +GAS++ I+ L ++++ + L AG +AP
Sbjct: 227 IGIAVCCCLPCIIAIL-YAVT---DQEGASEEDINNLSKYKFRTMGEADKLVAGIAAPVG 282
Query: 286 ------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + C
Sbjct: 283 GVMTECGTNPPVEHILSAEDAECCICLCPYEDGTELRELPCNHHFHCTCIDKWLHINATC 342
Query: 328 PLCK 331
PLCK
Sbjct: 343 PLCK 346
>gi|356524591|ref|XP_003530912.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 360
Score = 113 bits (282), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 75/269 (27%), Positives = 129/269 (47%), Gaps = 37/269 (13%)
Query: 99 ISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQ 158
+ + L+ + KE+P P+R WI GY + CLL + L++ YR+ + D S +++
Sbjct: 74 VVVSAVMLACTVKENPNTPIRWWICGYALQCLLHVALVWLEYRRRNDAPGDEDSAANLDY 133
Query: 159 QRSSEDSRFS----------HLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLH 208
++ +C + + +W+++G WV Q AP L+
Sbjct: 134 DDVNDSDEDDVGTSGSSSSTGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLY 193
Query: 209 VLCISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRL 264
L + LA++ F +L L LCCC+P I ++L Y + A +GAS+ +S L
Sbjct: 194 WLTVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASESDLSIL 249
Query: 265 PSWRYKRVDSN-------------LEAGNSAPANE------DPECCICLAKYKEKEEVRK 305
P +R++ + + +E N NE D ECCIC++ Y++ E+
Sbjct: 250 PKYRFQMLSNEETPGEGGGGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHV 309
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
LPC+H FH C+ +WL++ + CPLCK +
Sbjct: 310 LPCNHHFHSTCIVKWLKMNATCPLCKYNI 338
>gi|356513052|ref|XP_003525228.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like isoform 1 [Glycine
max]
Length = 344
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 128/261 (49%), Gaps = 36/261 (13%)
Query: 106 LSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQR----- 160
L+ + KE+P P+R WI GY + CL+ + L++ YR+ + D S ++
Sbjct: 81 LACTVKENPNTPIRWWICGYALQCLVHVALVWLEYRRRNDAPRDEESAASLQYDDVNDSD 140
Query: 161 -----SSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLL 215
+S S S +C + + +W+++G WV Q AP L+ L + L
Sbjct: 141 EDDVGTSGSSSSSGFTKRCASLNTMISLLWWMVGFYWVVSGGDILLQDAPRLYWLSVVFL 200
Query: 216 AWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR 271
A++ F +L L LCCC+P I ++L Y + A +GAS+ +S LP +R++
Sbjct: 201 AFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASESDLSILPKYRFQL 256
Query: 272 VDSN------------LEAGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFH 313
+ + +E N NE D ECCIC++ Y++ E+ LPC+H FH
Sbjct: 257 LSNEETPGEGGGSMIPMETSNGYSVNERTLSPEDAECCICISSYEDGAELHVLPCNHHFH 316
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
C+ +WL++ + CPLCK +
Sbjct: 317 STCIVKWLKMNATCPLCKYNI 337
>gi|79317862|ref|NP_001031032.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
gi|222424260|dbj|BAH20087.1| AT1G12760 [Arabidopsis thaliana]
gi|332190804|gb|AEE28925.1| E3 ubiquitin-protein ligase [Arabidopsis thaliana]
Length = 337
Score = 112 bits (281), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 83/305 (27%), Positives = 142/305 (46%), Gaps = 72/305 (23%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA-- 145
+ L+++ L +S+ T L +S+KE PI P+R+W++GY + C+L ++ + YR+
Sbjct: 30 VVLDIVWNLAFVSVATAILVMSRKEHPIMPLRVWLLGYALQCVLHMVCVCVEYRRRNRRR 89
Query: 146 ----------------------------------SQVDGFSLPDVEQQRSSEDSRFSHLM 171
S V SL ++ + SS +
Sbjct: 90 TNRTTTTTPPRSRSSSSSSSSSSLEEEALGSRRNSGVQDLSLGHLDTESSS-------VA 142
Query: 172 NKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFL 227
++ +F IW+++G WV Q +P ++ L I L ++ + +
Sbjct: 143 KHLESANTMFSFIWWIIGFYWVSAGGQELAQESPRIYWLSIVFLGFDVFFVVFCVALACV 202
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV-DSN----------- 275
+ + +CCC+P I +VL Y + A +GAS + I +L ++++++ D+N
Sbjct: 203 IGIAVCCCLPCIIAVL-YAV---ADQEGASKEDIEQLTKFKFRKLGDANKHTNDEAQGTT 258
Query: 276 ----LEAGNSAPA-----NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
E G +P ED ECCICL+ Y++ E+R+LPC H FH CVD+WL I +
Sbjct: 259 EGIMTECGTDSPIEHTLLQEDAECCICLSAYEDGTELRELPCGHHFHCSCVDKWLYINAT 318
Query: 327 CPLCK 331
CPLCK
Sbjct: 319 CPLCK 323
>gi|356497216|ref|XP_003517458.1| PREDICTED: E3 ubiquitin-protein ligase At1g12760-like [Glycine max]
Length = 385
Score = 112 bits (280), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 77/270 (28%), Positives = 125/270 (46%), Gaps = 51/270 (18%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA----------SQVDGFSLPDVEQ 158
S E+P P+R+WIVGY + C+L ++ + YR+ +V S
Sbjct: 106 SASEAPGMPLRLWIVGYAMQCVLHMVCVCVEYRRRRRQQRAAASSVQDRVGSSSGNLSVS 165
Query: 159 QRSSE-------------DSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 205
R D + + ++ +F +W+++G WV Q +P
Sbjct: 166 SREGSASGSAQYVSLGQLDDEGTSVAKHLESANTMFSFVWWIIGFYWVSAGGQALAQDSP 225
Query: 206 NLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQI 261
L+ LCI L ++ + ++ + +CCC+P I ++L Y + A +GAS + I
Sbjct: 226 QLYWLCIIFLGFDVFFVVFCVALACIIGIAVCCCLPCIIALL-YAV---ADQEGASKEDI 281
Query: 262 SRLPSWRYKRVDSN---------------LEAGNSAP-----ANEDPECCICLAKYKEKE 301
+L ++++R++SN E +P A ED ECCICL+ Y +
Sbjct: 282 EQLSKFKFRRIESNEKLTGTIQGPVGGIMTECQADSPIEHVLAEEDAECCICLSSYDDGV 341
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
E+R+LPC H FH CVD+WL I + CPLCK
Sbjct: 342 ELRELPCGHHFHCVCVDKWLYINATCPLCK 371
>gi|297603205|ref|NP_001053593.2| Os04g0568900 [Oryza sativa Japonica Group]
gi|125549384|gb|EAY95206.1| hypothetical protein OsI_17025 [Oryza sativa Indica Group]
gi|125591326|gb|EAZ31676.1| hypothetical protein OsJ_15824 [Oryza sativa Japonica Group]
gi|255675703|dbj|BAF15507.2| Os04g0568900 [Oryza sativa Japonica Group]
Length = 267
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 73/255 (28%), Positives = 122/255 (47%), Gaps = 44/255 (17%)
Query: 117 PMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRS----------SEDSR 166
P+R W+ GY + C++ ++ + YR + + D E+ +ED R
Sbjct: 2 PLRTWVAGYALQCVVHMVCVAIEYRMRRGQRDRAPASADEERGSDGSSSSSDDDVTEDDR 61
Query: 167 FSH------LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNAL 220
+ ++ +F IW+++G W+ + AP L+ LCI LA++
Sbjct: 62 RGSCTDCVSIAKHLESANTMFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVF 121
Query: 221 SYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN- 275
F ++ + +CCC+P I ++L Y ++ +GAS+D I ++P ++++R D
Sbjct: 122 FVVFCVALACIIGIAVCCCLPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRTDEPE 177
Query: 276 --------------LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
E G + P A ED ECCICL+ Y + E+R+LPC H FH C
Sbjct: 178 KQTADETGPFGGIMTECGTNQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCAC 237
Query: 317 VDQWLRILSCCPLCK 331
+D+WL I + CPLCK
Sbjct: 238 IDKWLHINATCPLCK 252
>gi|242062606|ref|XP_002452592.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
gi|241932423|gb|EES05568.1| hypothetical protein SORBIDRAFT_04g028660 [Sorghum bicolor]
Length = 366
Score = 112 bits (279), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 78/258 (30%), Positives = 122/258 (47%), Gaps = 40/258 (15%)
Query: 111 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRF--- 167
+ESP+ P+R+W+VGY CL+ + L+ R+ S DVE + DS
Sbjct: 108 EESPVKPLRLWLVGYAAQCLVHVGLVCADTRRGTRRAR--GSASDVESAGAGTDSSDADS 165
Query: 168 ---------SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWN 218
S ++C T L +W+++G W+ AP L+ L + LA++
Sbjct: 166 EDDERAEGRSSRTSRCETMNTLISFLWWIIGFYWLVSGGEVLEYGAPRLYWLTVVFLAFD 225
Query: 219 ALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS 274
F + + LCCC+P + ++L Y + A +GASD IS LP +R+
Sbjct: 226 VFFAVFCVAVACFIGIALCCCLPCVIAIL-YAL---AGQEGASDADISVLPRYRFSDPSE 281
Query: 275 NLEAG-----------NSAPAN-------EDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
+ E G NS + ED ECC+CL+ Y++ E+ LPC+H FH C
Sbjct: 282 DGEKGTDEGLMIPILNNSGVSTSERILLREDAECCVCLSSYEDGAELSALPCNHHFHWTC 341
Query: 317 VDQWLRILSCCPLCKQEL 334
+ +WLR+ + CPLCK +
Sbjct: 342 ITKWLRMNATCPLCKYNI 359
>gi|297844460|ref|XP_002890111.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
gi|297335953|gb|EFH66370.1| hypothetical protein ARALYDRAFT_334843 [Arabidopsis lyrata subsp.
lyrata]
Length = 258
Score = 110 bits (276), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 74/260 (28%), Positives = 116/260 (44%), Gaps = 70/260 (26%)
Query: 84 SSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL------- 136
S W T+EL+ LVQI L+++K E + W++GY GC+ + L+L
Sbjct: 59 GSLWNTMELVVTLVQIVASLVVLTVAKDEHLQALLLTWVIGYTCGCIANTLVLLLSCVRK 118
Query: 137 YGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDS 196
Y R +++DG +M+ + +E FF +W V+G +W+
Sbjct: 119 YNRIGVYSRTRIDG-------------------VMDALKMGIECFFVVWLVLGILWICYG 159
Query: 197 RFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA 256
S AP L+ LC+ +A++ + +++ LL A +G
Sbjct: 160 H-SSPSDAPKLYRLCVVFIAFSCIRFAYAVLL----------------------CAGEGL 196
Query: 257 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV--RKLPCSHMFHL 314
+ + PS D CCICL KY E+E V RKL CSH+FH
Sbjct: 197 RGGFVFQKPS-------------------HDDCCCICLGKYGEEEGVALRKLECSHVFHS 237
Query: 315 KCVDQWLRILSCCPLCKQEL 334
+C+D+WLRI S CPLC+ ++
Sbjct: 238 ECIDKWLRIKSSCPLCQSQV 257
>gi|218191528|gb|EEC73955.1| hypothetical protein OsI_08846 [Oryza sativa Indica Group]
Length = 322
Score = 110 bits (275), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 127/283 (44%), Gaps = 62/283 (21%)
Query: 109 SKKESPIWPMRIWIVGYDIGCLLSLLLLYG--RYRQLYASQVD-----------GFSLPD 155
S +ESP+ P+R+W+VGY + CL+ + L+ R R +A D G D
Sbjct: 38 STEESPVTPLRLWLVGYALQCLVHVGLVCSDSRRRPAHARSSDVESADGDAAGAGTDSSD 97
Query: 156 VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP---------- 205
+ + R S +C + + +W+++G WV Q AP
Sbjct: 98 SDDDDEGREQR-SSFAKRCESINTMVSFLWWIIGFYWVVSGGDVLEQDAPRLYWYCGPKP 156
Query: 206 ------------NLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNM 249
N+H+L + LA++ F + + LCCC+P + ++L Y +
Sbjct: 157 VPITDYFMIVQSNVHMLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAIL-YAL-- 213
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLEAG-----------NSAPA-------NEDPECC 291
A +GASD I LP +RY + + G NS + +ED ECC
Sbjct: 214 -AGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAECC 272
Query: 292 ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ICL+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK +
Sbjct: 273 ICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNI 315
>gi|297742577|emb|CBI34726.3| unnamed protein product [Vitis vinifera]
Length = 269
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 129/261 (49%), Gaps = 47/261 (18%)
Query: 117 PMRIWIVGYDIGCLLSLLLLYGRYRQ------LYASQVDGFSLP---------DVEQQRS 161
P+R WIVGY + C+L ++ + YR+ ++ S+ DG D Q +
Sbjct: 2 PLRFWIVGYALQCILHIVCVSVEYRRRRRRAGVFGSEDDGIGSGGSYSSSPQGDSSQYVT 61
Query: 162 ----SEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAW 217
++S S + ++ +F IW+++G WV + +P L+ LCI L +
Sbjct: 62 LASLGDESSTSSVAKHLESANTMFSFIWWIIGFYWVSAGGQALARDSPQLYWLCIIFLGF 121
Query: 218 NALSY----SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRV- 272
+ + ++ + +CCC+P I ++L Y + A +GAS + I +L +++++V
Sbjct: 122 DVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAV---ADQEGASKEDIDQLSRFKFRKVG 177
Query: 273 -----DSNL---------EAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
D ++ E G AP + ED ECCICL+ Y + E+R+LPC H FH
Sbjct: 178 DIEKIDGDIQGACGGIMTECGTDAPTEHVLSQEDAECCICLSAYDDGVELRELPCGHHFH 237
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
CVD+WL I + CPLCK +
Sbjct: 238 CTCVDKWLYINATCPLCKYNI 258
>gi|168003471|ref|XP_001754436.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694538|gb|EDQ80886.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 338
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 77/285 (27%), Positives = 139/285 (48%), Gaps = 45/285 (15%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----RQL 143
+ L+L+ L + + L +SKKE+ +RIWI+GY + C++ +L + Y +Q+
Sbjct: 49 VVLDLIWNLAFVQVSLAVLVLSKKETNCNELRIWIIGYALQCVVHMLCVCCEYLRRQQQV 108
Query: 144 YAS----QVDGFSLPDVEQQRSSEDSRF--------SHLMNKCRTSLELFFAIWFVMGNV 191
A+ + + + DS F + + ++ +F +W+V+G
Sbjct: 109 NANPSSVSSSNSTYAPINNGENDVDSGFDDDGLSNEASWAKRLESANTMFSFVWWVVGFY 168
Query: 192 WVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISSVLGYNM 247
W+ AP ++ LC+ L ++ + ++ + +CCC+P I ++L Y +
Sbjct: 169 WITAGGQSLAVDAPYVYWLCVLFLTFDVFFVVFCVALACVIGIAVCCCLPCIIAIL-YAV 227
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLE---------------AGNSAPANE------ 286
A +GAS++ I+ LP+ +++++ S+ + G S E
Sbjct: 228 ---ADQEGASEEDINNLPTAKFRKISSDGKITANYERALAGVMTFVGASENLTERSLFED 284
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
D ECCICL+ Y++ E+R LPCSH FH C+ +WLRI + CPLCK
Sbjct: 285 DAECCICLSSYEDGVELRDLPCSHHFHSTCIIKWLRINATCPLCK 329
>gi|357509161|ref|XP_003624869.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355499884|gb|AES81087.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 297
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/250 (29%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 111 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 170
E P P+R+W+ GY CLL + ++ +R + D FS + E
Sbjct: 63 NERPSTPLRLWLCGYAFECLLHVAFVFSEFR---VTTRDSFSHTPYSIAKKLEP------ 113
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 226
MN +S +W+V G W+ + +P L+ L + LA++ F
Sbjct: 114 MNTLASS------VWWVFGFYWIVVGGQPLLEDSPRLYWLTVVFLAFDVFFIIFCIGMAC 167
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKR------VDSN----- 275
++F L C +P+I+ L Y + + +GAS+D IS LP +R+ + VD N
Sbjct: 168 IVFFALFCIIPIIA--LAYALRI---REGASEDDISSLPMYRFSQSNVMVMVDDNKKQHV 222
Query: 276 -LEAGNSAPAN--------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
+ G+ P++ +D ECCICL Y + E+ +LPC+H FH C+ +WLR +
Sbjct: 223 KAKIGSYNPSHISELSLHPDDSECCICLCPYVDGTELYRLPCTHHFHCACISRWLRTKAT 282
Query: 327 CPLCKQELER 336
CPLCK + R
Sbjct: 283 CPLCKYNIRR 292
>gi|356570399|ref|XP_003553376.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 327
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 75/250 (30%), Positives = 118/250 (47%), Gaps = 44/250 (17%)
Query: 111 KESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHL 170
+E P P+R+W+ GY C+L + +Y +R D FS + E
Sbjct: 93 RERPATPLRLWLCGYAFECVLHMAFVYFEFRTRIR---DSFSHTTYSIVKKLEP------ 143
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 226
MN +S +W+V G W+ + +P+L+ L + LA++ F
Sbjct: 144 MNTLASS------VWWVFGFYWIVVGGQALLEDSPHLYWLTVVFLAFDVFFIIFCIGMAC 197
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK------RVDSN----- 275
++F L C +P+I+ L Y M + +GAS++ I LP +R+ VD N
Sbjct: 198 IVFFALFCIIPIIA--LAYAMRI---REGASEEDIRSLPMYRFSLSNSLVMVDDNKKQLV 252
Query: 276 ---LEAGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
+++ N + +E D ECCICL Y E EE+ +LPC+H FH C+ +WLR +
Sbjct: 253 KVRVDSCNGSHMSELSLHPDDSECCICLCPYVEGEELYRLPCTHHFHCGCISRWLRTKAT 312
Query: 327 CPLCKQELER 336
CPLCK + R
Sbjct: 313 CPLCKFNILR 322
>gi|194699464|gb|ACF83816.1| unknown [Zea mays]
gi|414885023|tpg|DAA61037.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 180
Score = 110 bits (274), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 88/149 (59%), Gaps = 22/149 (14%)
Query: 207 LHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 266
++ LC++ LA + + Y+ PF++ +CCC P + SVL ++G ++GA+ + I LP+
Sbjct: 1 MYRLCLAFLALSCVGYAIPFIMCAAICCCFPCLISVLRLQEDLGQ-NRGATQELIDALPT 59
Query: 267 WRYK--RV-----------DSNLEAGNSAPAN--------EDPECCICLAKYKEKEEVRK 305
+++K RV + E G P ED CCICL KY + +E+R+
Sbjct: 60 YKFKPKRVKNWGIDHASSSEHLDEGGILGPGTKKERVVSAEDAVCCICLTKYGDDDELRE 119
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 120 LPCTHFFHVQCVDKWLKINAVCPLCKTEI 148
>gi|115471969|ref|NP_001059583.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|33146524|dbj|BAC79657.1| putative RES protein [Oryza sativa Japonica Group]
gi|113611119|dbj|BAF21497.1| Os07g0463400 [Oryza sativa Japonica Group]
gi|125600141|gb|EAZ39717.1| hypothetical protein OsJ_24155 [Oryza sativa Japonica Group]
gi|215695316|dbj|BAG90507.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 361
Score = 107 bits (268), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 123/245 (50%), Gaps = 33/245 (13%)
Query: 112 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFS-HL 170
ESP P+R+W+ GY + CL +L + YR+ ++ GF Q ++ D F +
Sbjct: 112 ESPSVPLRVWLAGYVLQCLFHVLCVTVEYRRRREARGGGFG----ADQGAAADGDFKLSI 167
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 226
+ ++ +F IW+++G W+ AP L+ L I LA++ F
Sbjct: 168 VKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVALAC 227
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPA 284
++ + +CCC+P I ++L + +GAS++ I+ L ++++ + L AG +AP
Sbjct: 228 VIGIAVCCCLPCIIAILYAVTDQ----EGASEEDINNLSKFKFRTMGDADKLVAGIAAPV 283
Query: 285 N------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I +
Sbjct: 284 GGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHCTCIDKWLHINAT 343
Query: 327 CPLCK 331
CPLCK
Sbjct: 344 CPLCK 348
>gi|297813655|ref|XP_002874711.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
gi|297320548|gb|EFH50970.1| hypothetical protein ARALYDRAFT_327304 [Arabidopsis lyrata subsp.
lyrata]
Length = 420
Score = 107 bits (268), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 85/305 (27%), Positives = 136/305 (44%), Gaps = 68/305 (22%)
Query: 90 LELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQV- 148
L++L L ++I L +S+ E P P+R+W+VGY I C L + + YR+ +
Sbjct: 111 LDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHR 170
Query: 149 ----DGFSLPDVEQQRSSEDSRFSHLMNKCRTS-----LE----LFFAIWFVMGNVWVFD 195
DG P + + L ++ TS LE +F IW+++G WV
Sbjct: 171 SSSEDGGG-PGFTNSSQQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSA 229
Query: 196 SRFGSFQRAPNLHVLCISLLA----WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGA 251
+P L+ LCI L + + ++ L +CCC+P I ++L Y + A
Sbjct: 230 GGQTLSGDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---A 285
Query: 252 ADKGASDDQISRLPSWRYKRVDSN-----------LEAGNSAPAN-----EDP------- 288
+GAS + I ++P +R+ ++ ++ E G +P ED
Sbjct: 286 DQEGASKNDIDQMPKFRFTKIGNDEKLSGKARGIMTECGTDSPIERSLSPEDAVHSHFHI 345
Query: 289 ----------------------ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
ECCICL +Y++ E+R+LPC+H FH C+D+WL I S
Sbjct: 346 LMQLYIFKVCRLINSWLLMILKECCICLCEYEDGVELRELPCNHHFHCACIDKWLHINSR 405
Query: 327 CPLCK 331
CPLCK
Sbjct: 406 CPLCK 410
>gi|218199557|gb|EEC81984.1| hypothetical protein OsI_25906 [Oryza sativa Indica Group]
Length = 361
Score = 107 bits (266), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 121/245 (49%), Gaps = 33/245 (13%)
Query: 112 ESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFS-HL 170
ESP P+R+W+ GY + CL +L + YR+ ++ Q ++ D F +
Sbjct: 112 ESPSVPLRVWLSGYVLQCLFHVLCVTVEYRRRREAR----GGGFGADQGAAADGDFKLSI 167
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPF---- 226
+ ++ +F IW+++G W+ AP L+ L I LA++ F
Sbjct: 168 VKHLESANTMFSFIWWIIGFYWISAGGQALSHDAPQLYWLSIVFLAFDVFFVVFCVALAC 227
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPA 284
++ + +CCC+P I ++L + +GAS++ I+ L ++++ + L AG +AP
Sbjct: 228 VIGIAVCCCLPCIIAILYAVTDQ----EGASEEDINNLSKFKFRTMGDADKLVAGIAAPV 283
Query: 285 N------------------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I +
Sbjct: 284 GGVMTECGTNPPVEHFLSAEDAECCICLCPYEDGAELRELPCNHHFHCTCIDKWLHINAT 343
Query: 327 CPLCK 331
CPLCK
Sbjct: 344 CPLCK 348
>gi|147777193|emb|CAN65431.1| hypothetical protein VITISV_017099 [Vitis vinifera]
Length = 342
Score = 106 bits (265), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/275 (26%), Positives = 124/275 (45%), Gaps = 53/275 (19%)
Query: 84 SSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLL---YGRY 140
S + L+++ L + + L +S+ E+P P+R+WI+GY + C+L ++ + Y R
Sbjct: 79 SKPIVILDIVWNLAFVVVAMTVLVMSRDETPSTPLRLWIIGYGLQCVLHMVCICVEYKRR 138
Query: 141 RQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGS 200
R L +S + + + D R
Sbjct: 139 RHLASSGA----------------------VERSGGWGSGHLSSSSGSDEGDPIDYRVEV 176
Query: 201 FQRAPNLHVLCISLLAWNAL----SYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA 256
R + LCI LA++ + ++ + +CCC+P I ++L Y + A +GA
Sbjct: 177 RNRVEDETRLCIVFLAFDVFFVVICVAVACVIGIAVCCCLPCIIAIL-YTV---ADQEGA 232
Query: 257 SDDQISRLPSWRYKRVDSN---------------LEAGNSAPA-----NEDPECCICLAK 296
+ ++I RLP ++++R+ + E P ED ECCICL+
Sbjct: 233 TKEEIERLPKYKFRRIGESEKLNGEIQESFGGIMTECDTDTPMEHVIPQEDAECCICLSA 292
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
Y+++ E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 293 YEDETELRELPCRHRFHCTCIDKWLYINATCPLCK 327
>gi|4539459|emb|CAB39939.1| putative protein [Arabidopsis thaliana]
gi|7267868|emb|CAB78211.1| putative protein [Arabidopsis thaliana]
Length = 419
Score = 105 bits (263), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 81/301 (26%), Positives = 132/301 (43%), Gaps = 63/301 (20%)
Query: 90 LELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY----RQLYA 145
L++L L ++I L +S+ E P P+R+W+VGY I C L + + Y R+ +
Sbjct: 112 LDILWNLAFVAIGVAVLILSRDEKPNMPLRVWVVGYGIQCWLHMACVCVEYRRRRRRRHP 171
Query: 146 SQVDGFSLPDVEQQRS------SEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFG 199
G L + Q+ + S+ ++ +F IW+++G WV
Sbjct: 172 EDGGGSGLTNSSSQQYVSLAQLEDRGETSNPAKHLESANTMFSFIWWIIGFYWVSAGGQT 231
Query: 200 SFQRAPNLHVLCISLLA----WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG 255
+P L+ LCI L + + ++ L +CCC+P I ++L Y + A +G
Sbjct: 232 LSSDSPQLYWLCIIFLGFDVFFVVFCVALACVIGLAVCCCLPCIIAIL-YAV---ADQEG 287
Query: 256 ASDDQISRLPSWRYKRVDS-----------NLEAGNSAPAN-----EDP----------- 288
AS + I ++P +R+ + + E G +P ED
Sbjct: 288 ASKNDIDQMPKFRFTKTGNVEKLSGKARGIMTECGTDSPIERSLSPEDAVQSHFHILIKL 347
Query: 289 ------------------ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
ECCICL +Y++ E+R+LPC+H FH C+D+WL I S CPLC
Sbjct: 348 YILKVCKIDNAWLLMILQECCICLCEYEDGVELRELPCNHHFHCTCIDKWLHINSRCPLC 407
Query: 331 K 331
K
Sbjct: 408 K 408
>gi|297737629|emb|CBI26830.3| unnamed protein product [Vitis vinifera]
Length = 313
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/265 (28%), Positives = 123/265 (46%), Gaps = 40/265 (15%)
Query: 106 LSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-----------RQLYASQVDGFSLP 154
L + +E P P+R+WI GY + C + ++L++ Y Q Q +
Sbjct: 2 LICTARERPNTPIRLWICGYALQCGVHVVLVWLEYRRRNRRRVRDEEQQQQPQHSDSDVN 61
Query: 155 DVEQQ--RSSEDSRF--SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVL 210
D E + SS F S + +C + + +W+++G WV Q AP L+ L
Sbjct: 62 DSEDEDGNSSASGGFNQSSVTKRCESVNTMASFLWWIVGFYWVVSGGEALLQNAPRLYWL 121
Query: 211 CISLLAWNALSYSFPFLLFLL----LCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 266
+ LA++ F +L L LCCC+P I ++L Y + A +GAS+ +S LP
Sbjct: 122 AVVFLAFDVFFAIFCVVLACLIGIALCCCLPCIIAIL-YAV---AGQEGASEADLSMLPR 177
Query: 267 WRYK---RVDSNLEAGNSAPAN--------------EDPECCICLAKYKEKEEVRKLPCS 309
+R++ S + AG P ED ECCICL Y++ ++ LPC+
Sbjct: 178 YRFEANNEEKSGVGAGTMIPTETSSGYLANERILLPEDAECCICLHSYEDGTKLPALPCN 237
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
F C+ +WL+ + CPLCK ++
Sbjct: 238 PHFPSTCISKWLKKKATCPLCKYKI 262
>gi|356504625|ref|XP_003521096.1| PREDICTED: E3 ubiquitin protein ligase RIE1-like [Glycine max]
Length = 325
Score = 105 bits (262), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 125/273 (45%), Gaps = 44/273 (16%)
Query: 88 MTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ 147
+ L+++ L + + L + +E P P+R+W+ GY C+L + +Y +R
Sbjct: 68 LVLDMVWNLAFVVVAAGVLLSTLRERPSTPLRLWLCGYAFECVLHMAFVYFEFR---TGI 124
Query: 148 VDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNL 207
D FS + E MN +S +W++ G W+ + +P L
Sbjct: 125 RDSFSHTAYSIVKKLEP------MNTLASS------VWWIFGFYWIVVGDQALLEDSPRL 172
Query: 208 HVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISR 263
+ L + LA++ F ++F L C +P+I+ L Y M + +GAS++ I
Sbjct: 173 YWLTVVFLAFDVFFIIFCIGMACIVFFALFCIIPIIA--LAYAMRI---REGASEEDILS 227
Query: 264 LPSWRYKR------VDSN---LEAGNSAPAN-----------EDPECCICLAKYKEKEEV 303
LP +R+ + VD N L G N +D ECCICL Y E E+
Sbjct: 228 LPMYRFSQSNSLVMVDDNKKQLIKGRVDSCNGSHMSALSLHPDDSECCICLCPYVEGAEL 287
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
+LPC+H FH +C+ +WL+ + CPLCK + R
Sbjct: 288 YRLPCTHHFHCECIGRWLQTKATCPLCKFNILR 320
>gi|168064697|ref|XP_001784296.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162664172|gb|EDQ50902.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 296
Score = 104 bits (259), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 75/252 (29%), Positives = 126/252 (50%), Gaps = 45/252 (17%)
Query: 110 KKESPIWPMRIWIVGYDIGCLLSLLLLYGRY--RQLYASQVDGFSLPDVEQQRSSEDSRF 167
+KE +RIWIVGY + C++ +L + Y RQ Q + S ++ S ++ F
Sbjct: 52 RKEKNCTELRIWIVGYALQCVVHMLCVCCEYLRRQQQQQQANANSSLSWAKRLESANTMF 111
Query: 168 SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----S 223
S +W+++G W+ AP+++ LC+ LA++ +
Sbjct: 112 SF--------------VWWIVGFYWITAGGQSLAVDAPHVYWLCVVFLAFDVFFVVFCVA 157
Query: 224 FPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEA----- 278
++ + +CCC+P I ++L Y + A +GAS++ I+ LPS +++++ S+ +
Sbjct: 158 LACVIGIAVCCCLPCIIAIL-YAV---ADQEGASEEDINNLPSAKFRKIYSDGKGKGDTE 213
Query: 279 ----------GNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR 322
G SA E D ECCICL+ Y++ E+R LPCSH FH C+ +WLR
Sbjct: 214 RPLAGVMTFVGASANLTERSLFEDDAECCICLSSYEDGVELRHLPCSHHFHSTCISKWLR 273
Query: 323 ILSCCPLCKQEL 334
I + CPLCK +
Sbjct: 274 INATCPLCKYNI 285
>gi|222623429|gb|EEE57561.1| hypothetical protein OsJ_07906 [Oryza sativa Japonica Group]
Length = 231
Score = 101 bits (252), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 61/176 (34%), Positives = 95/176 (53%), Gaps = 28/176 (15%)
Query: 180 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCC 235
+F IW+++G WV AP L+ LCI LA++ F ++ + +CCC
Sbjct: 45 MFSFIWWIIGFYWVSAGGQVLTHDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCC 104
Query: 236 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS---------------NLEAGN 280
+P I ++L Y + + +GAS+D I ++P ++++R+D +E G
Sbjct: 105 LPCIIAIL-YAV---SDQEGASEDDIRQIPRYKFRRMDEPEKQSVNMTGSSGGIMIECGT 160
Query: 281 SAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ P A ED ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 161 NQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCK 216
>gi|29367335|gb|AAO72540.1| ring zinc finger protein-like protein [Oryza sativa Japonica Group]
Length = 250
Score = 101 bits (252), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 94/176 (53%), Gaps = 28/176 (15%)
Query: 180 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCC 235
+F IW+++G W+ + AP L+ LCI LA++ F ++ + +CCC
Sbjct: 64 MFSFIWWIIGFYWISAGGEDVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCC 123
Query: 236 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGN 280
+P I ++L Y ++ +GAS+D I ++P ++++R D E G
Sbjct: 124 LPCIIAIL-YAVS---DQEGASEDDIRQIPRYKFRRTDEPEKQTADETGPFGGIMTECGT 179
Query: 281 SAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ P A ED ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK
Sbjct: 180 NQPIEKVLAPEDAECCICLSAYDDGAELRELPCGHHFHCACIDKWLHINATCPLCK 235
>gi|414589110|tpg|DAA39681.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 199
Score = 99.4 bits (246), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 89/176 (50%), Gaps = 27/176 (15%)
Query: 180 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLL----CCC 235
+F IW+++G WV AP L+ L I LA++ F L ++ CCC
Sbjct: 14 MFSFIWWILGFYWVSAGGQALSHDAPQLYWLTIVFLAFDVFFVVFCIALACVIGIAVCCC 73
Query: 236 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDS--NLEAGNSAPAN-------- 285
+P I +L + ++GAS+D ++ L ++++ + L AG +AP
Sbjct: 74 LPCIIGIL---YAVTDQEEGASEDDVNNLSKFKFRTMSDADKLAAGIAAPVGGVMTECGT 130
Query: 286 ----------EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK
Sbjct: 131 NPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCK 186
>gi|413923426|gb|AFW63358.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 205
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 98/181 (54%), Gaps = 28/181 (15%)
Query: 180 LFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCC 235
+F +W+++G WV + AP L+ LCI LA++ F ++ + +CCC
Sbjct: 19 MFSFVWWIIGFYWVSAGGEVLTRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCC 78
Query: 236 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSN---------------LEAGN 280
+P I ++L Y ++ +GAS+D I ++P +++++++ +E G
Sbjct: 79 LPCIIAIL-YAVS---DQEGASEDDIRQIPKYKFRKMEEPEKQSVGVPGSSGGIMIECGT 134
Query: 281 SAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+ P A ED ECCICL+ Y + E+R+LPC H FH C+D+WL I + CPLCK +
Sbjct: 135 NQPIEKVLAAEDAECCICLSAYDDGAELRELPCGHHFHCVCIDKWLHINATCPLCKYNVR 194
Query: 336 R 336
+
Sbjct: 195 K 195
>gi|323454158|gb|EGB10028.1| hypothetical protein AURANDRAFT_36689 [Aureococcus anophagefferens]
Length = 360
Score = 97.1 bits (240), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 111/222 (50%), Gaps = 23/222 (10%)
Query: 119 RIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSL 178
R+W G+ G L+ + R +A + P + R+S R+ ++ R SL
Sbjct: 112 RVW--GFFHGLRLAATTVVAGLRWRFAPR------PPPDADRASR-RRYLVMVTNARNSL 162
Query: 179 ELFFAIWFVMGNVWVFDSRFGSFQRAPN--LHVLCISLLAWN----ALSYSFPFLLFLLL 232
+ IWFV+GN+W+ S A ++V + +L L F + +
Sbjct: 163 DALALIWFVVGNMWLLGGADDSCAEAGKSPIYVTDVVMLVVQYGQICLPCIFAIAMVPVF 222
Query: 233 CCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCI 292
C C+P + +L +++ A +GA+ ++RLP+ Y N+E EDP C +
Sbjct: 223 CFCLPCVIRLLA-SLHDPVAGRGATKRDLARLPTVPYSE---NMELLK----GEDPCCSV 274
Query: 293 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
C++ Y++ +++R LPC H+FH+ CVDQWL + + CPLC++ +
Sbjct: 275 CISDYEKGDKLRVLPCKHLFHVDCVDQWLSVNATCPLCRKSI 316
>gi|46390435|dbj|BAD15897.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
Length = 180
Score = 96.7 bits (239), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 57/175 (32%), Positives = 89/175 (50%), Gaps = 26/175 (14%)
Query: 184 IWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLI 239
+W+++G WV Q AP L+ L + LA++ F + + LCCC+P +
Sbjct: 5 LWWIIGFYWVVSGGDVLEQDAPRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCV 64
Query: 240 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAG-----------NSAPA---- 284
++L Y + A +GASD I LP +RY + + G NS +
Sbjct: 65 IAIL-YAL---AGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMIPVLNNSGTSTSER 120
Query: 285 ---NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
+ED ECCICL+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK + +
Sbjct: 121 ILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCPLCKYNILK 175
>gi|452822917|gb|EME29932.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 368
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 84/160 (52%), Gaps = 11/160 (6%)
Query: 178 LELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVP 237
L F+ +WF++G++W+ + + + AP+L+ L ++L+ P F L+ CC+P
Sbjct: 212 LNAFYLVWFIVGSIWLSECETCN-KTAPHLYRLVLALIVIYYALLGLPLACFCLIMCCLP 270
Query: 238 L-ISSVLGY-NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLA 295
L I +L Y + A+ +QI+ LP Y S ED C ICL
Sbjct: 271 LFIRLLLPYAESTQRRRGRAATAEQINNLPCSSY--------VHGSFEREEDTSCVICLT 322
Query: 296 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
Y + + +R LPC H +H KC+D+WL + CPLCK++++
Sbjct: 323 DYIDGDMIRHLPCKHHYHKKCIDEWLALDKSCPLCKKDID 362
>gi|194693834|gb|ACF81001.1| unknown [Zea mays]
Length = 156
Score = 95.1 bits (235), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 75/126 (59%), Gaps = 15/126 (11%)
Query: 224 FPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK------------- 270
PF+L L+CCC+P I S++G+ ++ ++GA+ D I+ L ++R++
Sbjct: 1 MPFILCALICCCLPCIISLMGFREDLDE-NRGATSDAINALGTYRFRSKKPRNGEANEGG 59
Query: 271 -RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 329
V + A + ED CCICLA+Y + +++R LPC H FH CVD+WL+I + CPL
Sbjct: 60 GGVFAPGTDKERAVSAEDAVCCICLARYVDNDDLRLLPCGHFFHKDCVDKWLKINALCPL 119
Query: 330 CKQELE 335
CK E++
Sbjct: 120 CKAEID 125
>gi|297800734|ref|XP_002868251.1| hypothetical protein ARALYDRAFT_915357 [Arabidopsis lyrata subsp.
lyrata]
gi|297314087|gb|EFH44510.1| hypothetical protein ARALYDRAFT_915357 [Arabidopsis lyrata subsp.
lyrata]
Length = 79
Score = 94.7 bits (234), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 59/90 (65%), Gaps = 12/90 (13%)
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 306
MNM ++D+ SD+Q+S L SW++KR+ N +S AN++ KEEVRKL
Sbjct: 1 MNMRSSDRATSDNQMSSLCSWKFKRIKENATDSDSDSANDN------------KEEVRKL 48
Query: 307 PCSHMFHLKCVDQWLRILSCCPLCKQELER 336
P SH FH CVDQWL I+SCCPLCKQ+L R
Sbjct: 49 PRSHKFHFNCVDQWLHIISCCPLCKQDLLR 78
>gi|297597455|ref|NP_001043999.2| Os01g0703300 [Oryza sativa Japonica Group]
gi|255673600|dbj|BAF05913.2| Os01g0703300, partial [Oryza sativa Japonica Group]
Length = 64
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/46 (86%), Positives = 45/46 (97%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ECCICLA+YKEKEEVR+LPC+HMFHLKCVD+WLRI+S CPLCKQEL
Sbjct: 18 ECCICLAQYKEKEEVRQLPCTHMFHLKCVDRWLRIISSCPLCKQEL 63
>gi|449017510|dbj|BAM80912.1| ring finger protein [Cyanidioschyzon merolae strain 10D]
Length = 365
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 86/162 (53%), Gaps = 10/162 (6%)
Query: 178 LELFFAIWFVMGNVWVFDSRF--GSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCC 235
L + W ++G++W+ +SR G+ AP L +C+ L+ P +L L+ CC
Sbjct: 183 LHALYLGWIILGSIWLSESRTCPGT---APLLFRICVILVLVYFAFLMLPLVLITLIICC 239
Query: 236 VPL-ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 294
+PL I ++ Y + ++ A+ + + +LP ++ D++ + P C ICL
Sbjct: 240 LPLFIRFLVNYAERLRRQERAAAPEIVEQLPVVQF---DASQCEDFGFEEDGAPICTICL 296
Query: 295 AKYKEKEEVRKLPCSHMFHLKCVDQWLRIL-SCCPLCKQELE 335
++Y+ EE+RKLPC H FH CVDQWL CP C+ +++
Sbjct: 297 SQYEPAEEIRKLPCGHHFHRACVDQWLLFFDKSCPQCRSDVD 338
>gi|224071770|ref|XP_002303571.1| predicted protein [Populus trichocarpa]
gi|222841003|gb|EEE78550.1| predicted protein [Populus trichocarpa]
Length = 180
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/174 (31%), Positives = 90/174 (51%), Gaps = 30/174 (17%)
Query: 186 FVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSY----SFPFLLFLLLCCCVPLISS 241
+++G WV +P L+ LCI L ++ + ++ + +CCC+P I +
Sbjct: 1 WIIGFYWVSTGGQALALGSPQLYWLCIVFLGFDVFFVVFCVALACVIGIAVCCCLPCIIA 60
Query: 242 VLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL----------------EAGNSAP-- 283
+L Y + +GAS + I +L ++++R D ++ E G +P
Sbjct: 61 IL-YAVT---DQEGASKEDIDQLAKFKFRR-DGDIDKLTGDDQGCSGGIMTECGTDSPME 115
Query: 284 ---ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+ ED ECCICL+ Y++ E+R+LPC H FH CVD+WL I + CPLCK ++
Sbjct: 116 HVLSGEDAECCICLSAYEDGAELRQLPCGHHFHCTCVDKWLYINATCPLCKYDI 169
>gi|281210989|gb|EFA85155.1| hypothetical protein PPL_02155 [Polysphondylium pallidum PN500]
Length = 548
Score = 87.8 bits (216), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 22/163 (13%)
Query: 182 FAIWFVMGNVWVFDSRFGSF--QRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLI 239
+ IWF++G + F ++ AP L + S++ + S F+ CC +
Sbjct: 324 YVIWFIVGVILTFKAKSSDQCPSSAPYLFWVIYSVVIIQIIICSLGFIF-----CCCSCV 378
Query: 240 SSVLGYNMNMGAADK------GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCIC 293
S+L +N A D+ GA+D I +L +YK A +D C IC
Sbjct: 379 FSLLRLGLNFEATDRAASVSRGATDSMIRKLSIKKYKV---------GLLAKDDTSCAIC 429
Query: 294 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
L++Y E +++R LPC+H +HL C+D+WL I CP CK+++++
Sbjct: 430 LSEYIEDDKIRILPCNHHYHLDCIDRWLIIDKSCPFCKRDIDK 472
>gi|115448539|ref|NP_001048049.1| Os02g0735900 [Oryza sativa Japonica Group]
gi|113537580|dbj|BAF09963.1| Os02g0735900, partial [Oryza sativa Japonica Group]
Length = 157
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 80/155 (51%), Gaps = 26/155 (16%)
Query: 204 APNLHVLCISLLAWNALSYSF----PFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDD 259
AP L+ L + LA++ F + + LCCC+P + ++L Y + A +GASD
Sbjct: 2 APRLYWLSVVFLAFDVFFAVFCVAMACFIGIALCCCLPCVIAIL-YAL---AGQEGASDA 57
Query: 260 QISRLPSWRYKRVDSNLEAG-----------NSAPA-------NEDPECCICLAKYKEKE 301
I LP +RY + + G NS + +ED ECCICL+ Y++
Sbjct: 58 DIGFLPRYRYSDPSEDGQKGTDEGVMIPVLNNSGTSTSERILLHEDAECCICLSSYEDGA 117
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
E+ LPC+H FH C+ +WLR+ + CPLCK + +
Sbjct: 118 ELSALPCNHHFHWTCITKWLRMHATCPLCKYNILK 152
>gi|326498713|dbj|BAK02342.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 374
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 79/317 (24%), Positives = 140/317 (44%), Gaps = 54/317 (17%)
Query: 33 ARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLG-SNPFNSSTWMTLE 91
A RP+ R GA L R+ R R + ++D S P + L+
Sbjct: 33 ALRRPSLR-GAARLLRRSGRRAMREPSMLVREAAAEHLEERQADWAYSRPV-----VALD 86
Query: 92 LLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGF 151
LL + I++ L +S+ E+ P+R W+ GY + C++ ++ + YR + SQ G
Sbjct: 87 LLWNISFITVAAVVLVLSRNENSPMPLRTWVAGYALQCIVHMVCVAVEYR-MRRSQRGGG 145
Query: 152 SLPDVEQ-----------------QRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVF 194
+P E+ Q D+ + L ++ +F IW+++G W+
Sbjct: 146 PVPADEERGSDVSSSSSDEDASENQLRGRDTDYVSLAKHLESANTMFSFIWWIIGFYWIS 205
Query: 195 DSRFGSFQRAPNLHVLCISLLAWNALSYSFPF----LLFLLLCCCVPLISSVLGYNMNMG 250
+ AP L+ LCI LA++ F ++ + +CCC+P I ++L Y ++
Sbjct: 206 AGGEEVIRDAPQLYWLCIVFLAFDVFFVVFCVALACIIGIAVCCCLPCIIAIL-YAVS-- 262
Query: 251 AADKGASDDQISRLPSWRYKRVDSN---------------LEAGNSAP-----ANEDPEC 290
+GAS+D I ++P ++++RVD E G + P A ED EC
Sbjct: 263 -DQEGASEDDIRQIPKYKFRRVDEPEKDSADATESSGGIMTECGTNQPIEKALAAEDAEC 321
Query: 291 CICLAKYKEKEEVRKLP 307
CIC++ E + +++P
Sbjct: 322 CICISA-AEARKYKRIP 337
>gi|215704127|dbj|BAG92967.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 132
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/126 (35%), Positives = 68/126 (53%), Gaps = 22/126 (17%)
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAG------- 279
+ + LCCC+P + ++L Y + A +GASD I LP +RY + + G
Sbjct: 4 FIGIALCCCLPCVIAIL-YAL---AGQEGASDADIGFLPRYRYSDPSEDGQKGTDEGVMI 59
Query: 280 ----NSAPA-------NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 328
NS + +ED ECCICL+ Y++ E+ LPC+H FH C+ +WLR+ + CP
Sbjct: 60 PVLNNSGTSTSERILLHEDAECCICLSSYEDGAELSALPCNHHFHWTCITKWLRMHATCP 119
Query: 329 LCKQEL 334
LCK +
Sbjct: 120 LCKYNI 125
>gi|452824772|gb|EME31773.1| zinc finger (C3HC4-type RING finger) family protein [Galdieria
sulphuraria]
Length = 351
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 69/227 (30%), Positives = 107/227 (47%), Gaps = 38/227 (16%)
Query: 117 PMRIWIVGYDIGCLLSLLLLYGRYRQLYASQ-VDGFSLPDVEQQRSSEDSRFSHLMNKCR 175
P++ W++ + + LLY +++L VD +S QQRS C
Sbjct: 140 PLKYWVLFNGV-----ISLLYTIFKRLSNEDLVDDYSQLTSIQQRSL----------ICF 184
Query: 176 TSLELFFAIWFVMGNVWVFDSRFGSFQR-APNLHVLCISLLAWNALSYSFPFLLFLLLCC 234
+ WF++G VWVF R + QR A L+ L ++L+ N + F + LL CC
Sbjct: 185 RIISWLSLAWFIVGMVWVF--RCETCQRTAVALYRLSLALVIINLI---FLGVSVLLACC 239
Query: 235 CVPLISSVLGYNMNMGAA----DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPEC 290
L ++ + N+ + +GA+ +I R+ RY R S E+ C
Sbjct: 240 IFVLAPNLFRPDFNLDGSVTFHRRGATKKEIDRILLVRYHRDSSE----------EESTC 289
Query: 291 CICLAKYKEKEEVRKLPCS--HMFHLKCVDQWLRILSCCPLCKQELE 335
ICL +Y+E +R LPC+ H FH CVD+WL + CPLCK E++
Sbjct: 290 PICLCEYEEGNLLRILPCTSKHRFHATCVDRWLILNKSCPLCKAEID 336
>gi|414885025|tpg|DAA61039.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 241
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 97/212 (45%), Gaps = 35/212 (16%)
Query: 23 SSPPATEDRMARNRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPF 82
S P EDR++ + + + + TA R +F RR Y +G +P+
Sbjct: 34 SDEPHQEDRLSTSTQTLSSESSPSISPTAYS---TRNLSFPRRDSIYGHGR------SPW 84
Query: 83 NSSTWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRY-- 140
NS W++ E++ + Q+ L S+ E P P+ WI+GY +GC+ SL L+Y RY
Sbjct: 85 NSGLWISFEIVMYIAQVVAAIVILIFSRHEHPHAPLFAWIIGYTLGCIASLPLIYWRYVH 144
Query: 141 --RQL-YASQVDGFSLPDVEQQRSSEDS-------------------RFSHLMNKCRTSL 178
R L Q + P + +SSE R S L +T +
Sbjct: 145 RNRHLDQEPQQPPTTYPTLTPSQSSEGRNHRTSGIVLHLGCISISCPRLSVLAYHFKTGV 204
Query: 179 ELFFAIWFVMGNVWVFDSRFGS--FQRAPNLH 208
+ FFA+WFV+GNVW+F R S Q APN++
Sbjct: 205 DCFFAVWFVVGNVWIFGGRSISSDAQDAPNMY 236
>gi|260818404|ref|XP_002604373.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
gi|229289699|gb|EEN60384.1| hypothetical protein BRAFLDRAFT_85466 [Branchiostoma floridae]
Length = 446
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 57/84 (67%), Gaps = 4/84 (4%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 311
A +G + D+I++LPS ++ R D+ A + NE+ C IC+ +YK ++R++PC+H
Sbjct: 353 APRGLTKDEIAQLPSRKFTRQDAQRLA---SEGNEN-SCTICMVEYKTGNKLRRMPCAHE 408
Query: 312 FHLKCVDQWLRILSCCPLCKQELE 335
FH KCVD+WL+ CP+C+Q++E
Sbjct: 409 FHSKCVDRWLKQNGSCPVCRQQVE 432
>gi|328868397|gb|EGG16775.1| transmembrane protein [Dictyostelium fasciculatum]
Length = 826
Score = 79.0 bits (193), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 28/196 (14%)
Query: 155 DVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSF--QRAPNLHVLCI 212
D Q S E +R + L + WF++G V F +R AP L +
Sbjct: 310 DDNGQPSPEVARVQLIFRNLHNVLSCSWITWFIVGIVCTFKARAHDTCTSSAPYLFWVSY 369
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPLISSV-LGYNMNM------------GAADKGASDD 259
S++ + + S L +L CCC + S + LG ++ M +GA+D
Sbjct: 370 SVVIFQIVIAS----LAMLFCCCSCIFSLMRLGVHIEMVQAAGGGGAAGGMGDSRGATDT 425
Query: 260 QISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
+ +L + ++K N+D C ICL Y + E++R LPC H +HL C+D+
Sbjct: 426 MLRKLSTKKFK---------TGVLPNDDCSCAICLTDYVDGEKIRILPCKHHYHLNCIDR 476
Query: 320 WLRILSCCPLCKQELE 335
WL CP CK++++
Sbjct: 477 WLIQNKSCPFCKRDID 492
>gi|422294477|gb|EKU21777.1| ring u-box domain-containing protein, partial [Nannochloropsis
gaditana CCMP526]
Length = 326
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 76/154 (49%), Gaps = 17/154 (11%)
Query: 168 SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFL 227
S L+ K R L++F IWF +GN WVF SR+ F +P + + + ++ ++ FP L
Sbjct: 183 SVLVEKAREILDIFALIWFTLGNAWVFGSRYCRFT-SPGIFYVSLGIIVMTYVTMLFPVL 241
Query: 228 LFLLL----CCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSA 282
L LL C C+P + A +GAS +I+ LP ++ + EAG
Sbjct: 242 LALLFVPFACFCMPCFLRLAIQLQAQDRASRGASSAEINALPVVKFGVGMFDGAEAGT-- 299
Query: 283 PANEDPECCICLAKYKEKEEVRKLPC--SHMFHL 314
C ICLA+Y+E E +R L C H FH+
Sbjct: 300 -------CAICLAEYEEGEALRLLQCPGKHHFHV 326
>gi|224086263|ref|XP_002335211.1| predicted protein [Populus trichocarpa]
gi|222833086|gb|EEE71563.1| predicted protein [Populus trichocarpa]
Length = 66
Score = 77.4 bits (189), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/66 (60%), Positives = 49/66 (74%), Gaps = 5/66 (7%)
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP-----ANEDPECCICLAKYKEKE 301
M+MG+ ++GASDDQISRLPS RYK VD++ E NS A+ D ECCICLAK K+ E
Sbjct: 1 MSMGSTERGASDDQISRLPSRRYKAVDTDSEFRNSVDCDSTVASADLECCICLAKNKDIE 60
Query: 302 EVRKLP 307
EVR+LP
Sbjct: 61 EVRQLP 66
>gi|390340259|ref|XP_799787.3| PREDICTED: uncharacterized protein LOC575286 [Strongylocentrotus
purpuratus]
Length = 1687
Score = 77.0 bits (188), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 64/111 (57%), Gaps = 13/111 (11%)
Query: 237 PLISSVLGYNMNMGAADKGASDDQISR--LPSWRYK-----RVDSNLEAGNSAPANEDPE 289
P+ ++ ++G ++GAS I R LP +YK DS+ E G A + P+
Sbjct: 1410 PMYEELVQLGEHLGQVNRGASRSTIERNTLPH-KYKLRHQKESDSSEETGEVEGAAKIPD 1468
Query: 290 -----CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
C ICL+ +++ E+VR+LPC H+FH++CVDQWL CP+C+ ++E
Sbjct: 1469 DDMEKCTICLSYFEDDEDVRRLPCMHLFHVECVDQWLVTNKRCPICRVDIE 1519
>gi|348690933|gb|EGZ30747.1| hypothetical protein PHYSODRAFT_295425 [Phytophthora sojae]
Length = 548
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/197 (22%), Positives = 88/197 (44%), Gaps = 23/197 (11%)
Query: 156 VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFV--MGNVWVFDSRFGSFQRAPNLHVLCIS 213
+E +S R++H R + + +G+VWV+++ N +
Sbjct: 334 IESDEASPPLRYNHRAALWREDTMVIHGGSYQSQLGDVWVYNTTNAETTEISN------N 387
Query: 214 LLAWNALSYSFPFLLFLLLCCCVPLISSVLGY--------NMNMGAADKGASDDQISRLP 265
L + S + F++ C ++ + G+ M A +G + +++ +L
Sbjct: 388 TLPLDPESLVYVLGAFIVTCWSCLALTVITGFLYDQVRAAQMRGAAVVRGVTKERLEQLR 447
Query: 266 SWRYKRVDSNLEA-------GNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
+Y R + N +A D C ICL ++++ E+VR LPC H+FH+ C+D
Sbjct: 448 VTKYCRAERNPQAPTEPLNPAEGGSTENDDVCPICLIEFEDGEDVRNLPCKHIFHVACID 507
Query: 319 QWLRILSCCPLCKQELE 335
+WL+ + CP+CK ++
Sbjct: 508 EWLKRNTSCPMCKSNVD 524
>gi|298711234|emb|CBJ32454.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 123
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 11/106 (10%)
Query: 226 FLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN 285
LL +LC C+P + ++G + KGA D+I +LP +Y+ V
Sbjct: 1 MLLVPVLCFCLPCVIRLMGM-LQGPQRRKGARQDEIEKLPVVKYREVQDM---------- 49
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
ED C ICL +Y+ ++E+RKLPC H FH CVD WL + + CP C+
Sbjct: 50 EDDACAICLVEYEAEDELRKLPCRHAFHKTCVDSWLAVNASCPNCR 95
>gi|330804127|ref|XP_003290050.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
gi|325079850|gb|EGC33431.1| hypothetical protein DICPUDRAFT_92417 [Dictyostelium purpureum]
Length = 102
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMF 312
+KGA++ +I +LP + + + N NE CCICL + + EEVR LPC H F
Sbjct: 22 NKGATNTEIIKLPVHKIDKNQATNPENNGPTTNE--TCCICLCEMENGEEVRTLPCKHFF 79
Query: 313 HLKCVDQWLRILSCCPLCKQEL 334
H+ C+DQWL++ CP+ K+ +
Sbjct: 80 HVTCIDQWLKVNKVCPVDKKAI 101
>gi|388514763|gb|AFK45443.1| unknown [Lotus japonicus]
Length = 145
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 284 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+ ED CCICLA Y+ +E+R+LPCSH FH CVD+WL+I + CPLCK E+
Sbjct: 79 SKEDAVCCICLATYENNDELRELPCSHFFHKDCVDKWLKINASCPLCKSEI 129
>gi|378755066|gb|EHY65093.1| hypothetical protein NERG_01539 [Nematocida sp. 1 ERTm2]
Length = 263
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED +C ICLA Y EKE++RKLPC H FH+ C+D+W I CPLCK+ +
Sbjct: 203 EEDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPI 252
>gi|387597135|gb|EIJ94755.1| hypothetical protein NEPG_00279, partial [Nematocida parisii ERTm1]
Length = 263
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED +C ICLA Y EKE++RKLPC H FH+ C+D+W I CPLCK+ +
Sbjct: 203 EEDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPI 252
>gi|387593481|gb|EIJ88505.1| hypothetical protein NEQG_01195 [Nematocida parisii ERTm3]
Length = 259
Score = 75.9 bits (185), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 36/50 (72%)
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED +C ICLA Y EKE++RKLPC H FH+ C+D+W I CPLCK+ +
Sbjct: 199 EEDAQCTICLAPYAEKEQIRKLPCKHHFHMTCIDEWFGIDDVCPLCKRPI 248
>gi|452823709|gb|EME30717.1| hypothetical protein Gasu_19590 [Galdieria sulphuraria]
Length = 286
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 15/93 (16%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAG--------NSAPA-----NEDP--ECCICLAKYK 298
+GASDD I R+PS+ + + D NL +S P+ NED C ICL Y
Sbjct: 190 QGASDDLIERIPSYIFVQPDQNLAKNELQENTRQSSVPSFAPKENEDTAMSCSICLEAYV 249
Query: 299 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ E++R LPC H FH CVD+WLR + CP+CK
Sbjct: 250 DGEQLRVLPCMHQFHSLCVDKWLRRYARCPICK 282
>gi|414885021|tpg|DAA61035.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 80
Score = 75.5 bits (184), Expect = 3e-11, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
CCICL KY + +E+R+LPC+H FH++CVD+WL+I + CPLCK E+
Sbjct: 4 CCICLTKYGDDDELRELPCTHFFHVQCVDKWLKINAVCPLCKTEI 48
>gi|429965613|gb|ELA47610.1| hypothetical protein VCUG_00933 [Vavraia culicis 'floridensis']
Length = 241
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/240 (27%), Positives = 112/240 (46%), Gaps = 45/240 (18%)
Query: 97 VQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDV 156
+Q+ T L ++ + P +++I Y++ L+ L+L + R+R+ + LPD+
Sbjct: 39 LQVIFNTSVLVVTMNQHSKAPFKLFISVYNVLVLVQLILFFLRHREYFRVA----RLPDI 94
Query: 157 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 216
Q ++E S FS+ ++ F W + G W + + AP LL
Sbjct: 95 --QDNNELSLFSNFVDA-------FSLFWCLTGFHWTQECKTCKIS-AP--------LLY 136
Query: 217 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL 276
+ L++S+ + ++ PLI+ VL + + A K LP YK
Sbjct: 137 YTTLTWSYLGIFVVV----SPLIAIVLL--IFIIAYFK-------PNLPVIEYK------ 177
Query: 277 EAGNSAPAN-EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
N+ N E+ C ICLA+Y ++++ LPC+H FHL C+D+W I CPLCK+ +
Sbjct: 178 ---NTGEINKENANCSICLAEYNVNDKIKILPCNHHFHLNCIDEWFNIDDICPLCKKPIN 234
>gi|242018674|ref|XP_002429799.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212514811|gb|EEB17061.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 125
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 6/88 (6%)
Query: 250 GAADKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
++GAS D I R P +YKR+ N+E + C ICL++++E E+VR+LP
Sbjct: 32 AQLNRGASQDTIERNTFPH-KYKRMKKNVEDSEEDHVEK---CTICLSEFEELEDVRRLP 87
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQELE 335
C H+FH++CVDQWL CP+C+ ++E
Sbjct: 88 CMHLFHIECVDQWLSTNKRCPICRVDIE 115
>gi|357466367|ref|XP_003603468.1| RING finger protein [Medicago truncatula]
gi|355492516|gb|AES73719.1| RING finger protein [Medicago truncatula]
Length = 81
Score = 75.1 bits (183), Expect = 4e-11, Method: Composition-based stats.
Identities = 27/45 (60%), Positives = 38/45 (84%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
CCIC+A Y+ +E+R+LPCSH+FH +CVD+WL+I + CPLCK E+
Sbjct: 6 CCICIANYENDDELRELPCSHLFHKECVDKWLKINALCPLCKSEI 50
>gi|357509173|ref|XP_003624875.1| RING finger protein [Medicago truncatula]
gi|355499890|gb|AES81093.1| RING finger protein [Medicago truncatula]
Length = 400
Score = 75.1 bits (183), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 20/103 (19%)
Query: 254 KGASDDQISRLPSWRYKR------VDSNLEAGNSAPAN--------------EDPECCIC 293
+GAS+D I LP +R+ + VD N + + A +D ECCIC
Sbjct: 293 EGASEDDIKSLPMYRFSQPNVMIMVDKNKKQLDEARIGSHNQSHISELSLHPDDSECCIC 352
Query: 294 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
L Y + E+ +LPC+H FH +C+ +WLR + CPLCK + R
Sbjct: 353 LCSYVDGTELYRLPCTHHFHCECISRWLRTKATCPLCKFNIRR 395
>gi|147815563|emb|CAN70534.1| hypothetical protein VITISV_010222 [Vitis vinifera]
Length = 244
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 56/85 (65%), Gaps = 9/85 (10%)
Query: 258 DDQISRLPSWRYKRVDSN----LEAG----NSAPANEDPECCICLAKYKEKEEVRKLPC- 308
D + LP++++K ++ L AG +++ + ED CCICL Y + EE+R+LPC
Sbjct: 151 DSPPNVLPTYKFKSKENGGGVLLAAGTKKKSASLSGEDVVCCICLGNYADNEELRELPCC 210
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQE 333
SH FH++CVD+WL+I + CPLC+ E
Sbjct: 211 SHFFHVECVDKWLKIKARCPLCQSE 235
>gi|413941893|gb|AFW74542.1| hypothetical protein ZEAMMB73_593005 [Zea mays]
Length = 193
Score = 74.7 bits (182), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/51 (64%), Positives = 39/51 (76%)
Query: 168 SHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWN 218
S+LMNK R LELFFA+WFVMGNVWVFD+R GSFQRAP L + S+ +
Sbjct: 42 SYLMNKARAFLELFFAMWFVMGNVWVFDARLGSFQRAPRLDGIYFSIFPFG 92
>gi|440494400|gb|ELQ76781.1| putative E3 ubiquitin ligase [Trachipleistophora hominis]
Length = 241
Score = 74.3 bits (181), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 66/240 (27%), Positives = 115/240 (47%), Gaps = 45/240 (18%)
Query: 97 VQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDV 156
+Q+ T L ++ + P +++I Y++ L+ ++L + R+R+ + LPD+
Sbjct: 39 LQVIYNTIILVVTMNQHTKAPFKLFISVYNVLVLVQIILFFLRHREYFRVT----RLPDI 94
Query: 157 EQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLA 216
Q ++E S FS+ ++ + LF W + G W + + AP L+ + A
Sbjct: 95 --QDNNELSLFSNFVD----AFSLF---WCLTGFHWTQECKTCKIT-APWLYY---TTYA 141
Query: 217 WNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNL 276
W+ L +F+++ PLI+ VL + + A K LP YK
Sbjct: 142 WSFLG------IFVVIS---PLIAIVLL--IFIIAYFK-------PNLPVIEYK------ 177
Query: 277 EAGNSAPAN-EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
N+ N E+ C ICLA+Y ++++ LPC+H FHL C+D+W I CPLCK+ +
Sbjct: 178 ---NAGEINKENANCSICLAEYNMNDKIKILPCNHHFHLNCIDEWFNIDDICPLCKKPIN 234
>gi|242063536|ref|XP_002453057.1| hypothetical protein SORBIDRAFT_04g037520 [Sorghum bicolor]
gi|241932888|gb|EES06033.1| hypothetical protein SORBIDRAFT_04g037520 [Sorghum bicolor]
Length = 318
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 55/84 (65%), Gaps = 5/84 (5%)
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNL-EAGNSAPANEDPECCICLAKYKEKEEVRKLP- 307
GA +G D I LP++ Y++ +N E+ ++APA+E C +CL +++E + VR LP
Sbjct: 133 GAEPRGLEDAAIRALPAFSYRKTPANAAESQSAAPASE---CAVCLGEFEEGDRVRMLPA 189
Query: 308 CSHMFHLKCVDQWLRILSCCPLCK 331
C H+FHL CVD WL+ + CPLC+
Sbjct: 190 CLHVFHLGCVDAWLQSNASCPLCR 213
>gi|348509737|ref|XP_003442403.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Oreochromis
niloticus]
Length = 977
Score = 74.3 bits (181), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 69/147 (46%), Gaps = 5/147 (3%)
Query: 194 FDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL--LLCCCVPLISSVLGYNMNMGA 251
S + P LH I + ++P + ++ + +L +G
Sbjct: 824 LHSHLPHYHPPPRLHHFPIPFMHTGISEVTYPHIRYISSRITGFGRTYEDLLHLEERLGT 883
Query: 252 ADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANEDPE--CCICLAKYKEKEEVRKLPC 308
++GAS I R +YK+ + + A+ED E C ICL+ +E E+VR+LPC
Sbjct: 884 VNRGASQGTIERCTYPHKYKKRKLHGKQDEDEGADEDTEEKCTICLSILEEGEDVRRLPC 943
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 944 MHLFHQLCVDQWLLTNKKCPICRVDIE 970
>gi|357509175|ref|XP_003624876.1| RING finger protein [Medicago truncatula]
gi|355499891|gb|AES81094.1| RING finger protein [Medicago truncatula]
Length = 296
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 76/148 (51%), Gaps = 24/148 (16%)
Query: 206 NLHVLCISLLAWNALSYSF--PFLLFLLLCCCVPLISSVLGYNMNMGA-ADKGASDDQIS 262
L ++C+SL + +SF ++F L C V +I+ L Y + +GAS+D I
Sbjct: 141 GLTMVCLSLNEFFDAVFSFWIYLIVFGALFCIVQIIA--LAYALTQPLRIREGASEDDIK 198
Query: 263 RLPSWRYKR------VDSN---LEAGNSAPAN----------EDPECCICLAKYKEKEEV 303
LP +R+ + VD N LEA + +D ECCICL Y + E+
Sbjct: 199 SLPMYRFCQPNVMIMVDKNKTQLEARTGSHNRSHISELSLHPDDSECCICLCPYVDGTEL 258
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+LPC+H FH +C+ +WLR + CPLCK
Sbjct: 259 YRLPCTHHFHCECIGRWLRTKATCPLCK 286
>gi|325182411|emb|CCA16864.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 342
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 52/191 (27%), Positives = 79/191 (41%), Gaps = 34/191 (17%)
Query: 165 SRFSHLMNKCRTSLELFFAIWFVMGNVWVF---DSRFGSFQRAPNLHVLCISLLAWNALS 221
++ + + L+L WF++GN+WV D++ G + + L +
Sbjct: 134 EQYMRYLGNVKYGLDLLGVFWFLVGNMWVISDDDAQHGKPATGSGEKLEDAAPLTPSHCD 193
Query: 222 YSFPFLLFLLLCC---------------------CVPLISSVLGYNMNMGAADKGASDDQ 260
S L F ++ C+P + VL KGAS +
Sbjct: 194 PSLYHLAFWMIVITYVKIFLPCILLLILLPVICFCLPCLIRVLS-RFQDPMRGKGASQEI 252
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
I+RL YK+ A +D CCICL Y E EE+R LPC H FH +C D+W
Sbjct: 253 IARLTCTNYKK---------DMFAQDDCNCCICLNAYVEDEELRLLPCRHHFHKQCADEW 303
Query: 321 LRILSCCPLCK 331
L + + CP C+
Sbjct: 304 LVVNATCPTCR 314
>gi|325179882|emb|CCA14284.1| transmembrane protein putative [Albugo laibachii Nc14]
Length = 320
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 81/176 (46%), Gaps = 10/176 (5%)
Query: 166 RFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFP 225
R + L+ R +L L W +MGNVW+F S + A +L S F
Sbjct: 134 RHAKLLKTIRFTLSLLELYWALMGNVWIFFSAGSTELDAHRCGDGSTTLH-----SVGFW 188
Query: 226 FLLFLLLCCCVPLISSVLGYNM-NMGAADKGASDDQIS--RLPSWRYKRVDSNLEAGNSA 282
L+ +C P + ++ Y + + D +Q++ +L + + + L
Sbjct: 189 LLIVPYVCELTPFLYCLVSYGIVQLTGWDLDEYVEQLTSAKLERGAKREIINQLTLRIFV 248
Query: 283 PANE--DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
P N D CCICL ++ E++R LPC+H FH C+D+WL + + CP C+ ++
Sbjct: 249 PTNSTYDTSCCICLCDFELNEKIRLLPCNHHFHSGCIDEWLGLNATCPTCRISIDE 304
>gi|432852760|ref|XP_004067371.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Oryzias latipes]
Length = 1034
Score = 73.9 bits (180), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/145 (30%), Positives = 71/145 (48%), Gaps = 5/145 (3%)
Query: 196 SRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL--LLCCCVPLISSVLGYNMNMGAAD 253
S + P LH IS++ ++P + ++ + +L +G +
Sbjct: 883 SHLPHYHAPPRLHHFPISVMHAGISDMTYPHIRYISSRMTGFGRTYEDLLHLEERLGTVN 942
Query: 254 KGASDDQISRLP-SWRYKRVDSNLEAGNSAPANEDPE--CCICLAKYKEKEEVRKLPCSH 310
+GAS I R +YK+ + + A+ED E C ICL+ +E E+VR+LPC H
Sbjct: 943 RGASQGTIERCTYPHKYKKRKLHGKQDEDQGADEDTEEKCTICLSILEEGEDVRRLPCMH 1002
Query: 311 MFHLKCVDQWLRILSCCPLCKQELE 335
+FH CVDQWL CP+C+ ++E
Sbjct: 1003 LFHQLCVDQWLLTNKKCPICRVDIE 1027
>gi|348528117|ref|XP_003451565.1| PREDICTED: RING finger protein 165-like [Oreochromis niloticus]
Length = 345
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRL--PSWRY 269
+Y +P L L L P +L +G+ +GA I R P
Sbjct: 213 NYPYPQLHLLALQSLNPSRHATAVRESYEELLQLEDRLGSVSRGAVQTTIERFTFPHKYK 272
Query: 270 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 329
KR L+ G + D +C ICL+ ++ E+VR+LPC H+FH CVDQWL CP+
Sbjct: 273 KRKPLQLKIGEEEETDVDEKCTICLSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCPI 332
Query: 330 CKQELE 335
C+ ++E
Sbjct: 333 CRVDIE 338
>gi|348669639|gb|EGZ09461.1| hypothetical protein PHYSODRAFT_521400 [Phytophthora sojae]
Length = 321
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/232 (26%), Positives = 107/232 (46%), Gaps = 31/232 (13%)
Query: 110 KKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPDVEQQRSSEDSRFSH 169
+ E+ + +++W++ + + L+LLL + Y A L + +
Sbjct: 92 QSETLCYRIQVWVLLHTVHLALTLLLEWTLYYLNGARSNSAIRLRE----------HYMA 141
Query: 170 LMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLF 229
+++ + L+L WF++GN+WV S ++ L + ++ +SY+ FL
Sbjct: 142 PLSQLKYGLDLAGLFWFLVGNMWVI-SDGARCDDGSAMYQLALWMIV---ISYAKIFLPC 197
Query: 230 LLLCC-------CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSA 282
LLL C+P + +L + KGA+ + I RL + Y + N
Sbjct: 198 LLLLALLPVLCFCLPCVIRLLS-RLQDPMRGKGATKEIIDRLETKTY--------SANMF 248
Query: 283 PANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
P ED CCICL Y+ + +R LPC H FH CVD+WL + S CP C++ +
Sbjct: 249 PP-EDACCCICLNDYEPSQSLRVLPCEHHFHKDCVDEWLLVNSTCPTCRKSI 299
>gi|119621879|gb|EAX01474.1| ring finger protein 165, isoform CRA_a [Homo sapiens]
Length = 262
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 64/128 (50%), Gaps = 12/128 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
++ +Y +P L FL L +L +G +GA + I R +YK
Sbjct: 136 TQMVVHEIRNYPYPQLHFLAL--------QLLQLEDRLGNVTRGAVQNTIERFTFPHKYK 187
Query: 271 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 188 KRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 247
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 248 PICRVDIE 255
>gi|414884510|tpg|DAA60524.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 93
Score = 73.2 bits (178), Expect = 2e-10, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 40/60 (66%), Gaps = 5/60 (8%)
Query: 277 EAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
E G + P + ED ECCICL Y++ E+R+LPC+H FH C+D+WL I + CPLCK
Sbjct: 21 ECGTNPPVEHILSAEDAECCICLCPYEDGVELRELPCNHHFHCSCIDKWLHINATCPLCK 80
>gi|344248155|gb|EGW04259.1| RING finger protein 165 [Cricetulus griseus]
Length = 280
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 137 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 196
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 197 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 256
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 257 QWLAMSKKCPICRVDIE 273
>gi|149029497|gb|EDL84711.1| similar to ring finger protein 111 (predicted) [Rattus norvegicus]
Length = 281
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 138 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 197
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 198 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 257
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 258 QWLAMSKKCPICRVDIE 274
>gi|148677515|gb|EDL09462.1| mCG18269 [Mus musculus]
Length = 280
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 137 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 196
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 197 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 256
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 257 QWLAMSKKCPICRVDIE 273
>gi|256818810|ref|NP_001157976.1| RING finger protein 165 [Mus musculus]
gi|378523436|sp|E9QAU8.1|RN165_MOUSE RecName: Full=RING finger protein 165
Length = 347
Score = 73.2 bits (178), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 263
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|256818812|ref|NP_001157977.1| ring finger protein 165 [Rattus norvegicus]
gi|183985981|gb|AAI66566.1| Rnf165 protein [Rattus norvegicus]
Length = 348
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 205 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 264
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 265 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 324
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 325 QWLAMSKKCPICRVDIE 341
>gi|395822968|ref|XP_003784773.1| PREDICTED: RING finger protein 165 [Otolemur garnettii]
Length = 347
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 263
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|345480478|ref|XP_003424157.1| PREDICTED: hypothetical protein LOC100678661 [Nasonia vitripennis]
Length = 612
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 38/47 (80%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL++++E E VR+LPC H+FH+ CVDQWL SCCP+C+ ++E
Sbjct: 555 KCTICLSEFEENENVRRLPCMHLFHIDCVDQWLSTNSCCPICRVDIE 601
>gi|256079620|ref|XP_002576084.1| ring finger protein 11 (sid 1669) (nedd4 ww domain-binding protein
2) [Schistosoma mansoni]
gi|353230819|emb|CCD77236.1| putative ring finger protein 11 (sid 1669) (nedd4 ww domain-binding
protein 2) [Schistosoma mansoni]
Length = 468
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 26/51 (50%), Positives = 37/51 (72%)
Query: 281 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
S+PA PEC ICL +Y++K+ +R LPC H FH+KC+D WL+ + CP C+
Sbjct: 218 SSPARGHPECEICLIEYQDKDRLRHLPCGHAFHMKCIDSWLKQSTTCPKCR 268
>gi|354477745|ref|XP_003501079.1| PREDICTED: RING finger protein 165-like [Cricetulus griseus]
Length = 355
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 212 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 271
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 272 RFTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 331
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 332 QWLAMSKKCPICRVDIE 348
>gi|395510609|ref|XP_003759566.1| PREDICTED: RING finger protein 165 [Sarcophilus harrisii]
Length = 347
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVP---------LISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G+ +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPNRHTSAVRESYEELLQLEDRLGSVSRGAVQNTIE 263
Query: 263 RLP-SWRYKRVDSNLEAGNSAPANE---DPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ G E D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQEGKGKKEDGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|321461482|gb|EFX72514.1| hypothetical protein DAPPUDRAFT_6903 [Daphnia pulex]
Length = 107
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRV-DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 306
M +GAS I R S YKR+ SN + + +C ICL +++E E+VR+L
Sbjct: 13 MAQLSRGASQTCIERNTLSHSYKRLLRSNSSVDGDSNEDNTEKCTICLCEFEEGEDVRRL 72
Query: 307 PCSHMFHLKCVDQWLRILSCCPLCKQELE 335
PC H+FH+ CVDQWL + CPLC+ ++E
Sbjct: 73 PCMHLFHVSCVDQWLTTVKFCPLCRVDIE 101
>gi|326521562|dbj|BAK00357.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 55/89 (61%), Gaps = 8/89 (8%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP- 307
+G+ G + +S LP Y++ EAG+++ A D C +CL++ + + VR+LP
Sbjct: 87 IGSRRHGLNASALSALPVTVYRK-----EAGSTSAAGAD--CAVCLSELVDGDTVRQLPN 139
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQELER 336
C H+FH++CVD WLR + CPLC+ E E+
Sbjct: 140 CGHVFHVECVDAWLRTRTSCPLCRAEAEQ 168
>gi|327266890|ref|XP_003218236.1| PREDICTED: e3 ubiquitin-protein ligase RNF13-like [Anolis
carolinensis]
Length = 384
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG-ASDDQISRLPS 266
H++ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLQKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|431896218|gb|ELK05634.1| RING finger protein 165 [Pteropus alecto]
Length = 404
Score = 72.4 bits (176), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 64/128 (50%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 270 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 329
Query: 271 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ D + + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 330 KRRPQDGKGKKEDGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 389
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 390 PICRVDIE 397
>gi|384252332|gb|EIE25808.1| hypothetical protein COCSUDRAFT_60820 [Coccomyxa subellipsoidea
C-169]
Length = 1018
Score = 72.0 bits (175), Expect = 3e-10, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G D I LP+ +Y S+ + E+ +C +C +++ E VR LPC
Sbjct: 913 VGTVSRGVPQDIIDALPNAKYTSRFSDAHPADGK--EEEEQCAVCRMEFEAGENVRLLPC 970
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQELER 336
SH++H C+ QWL I CP+C QE+ +
Sbjct: 971 SHVYHPDCIGQWLHINKVCPICSQEVTK 998
>gi|328768780|gb|EGF78825.1| hypothetical protein BATDEDRAFT_89994 [Batrachochytrium
dendrobatidis JAM81]
Length = 465
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 46/82 (56%), Gaps = 11/82 (13%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
K +S I+ P+ + +D ED C ICLA+Y ++++++PC H FH
Sbjct: 384 KASSSTDITAPPAPTFLELD-----------EEDAHCIICLAEYDSGDDLKQMPCKHHFH 432
Query: 314 LKCVDQWLRILSCCPLCKQELE 335
CVD WLR+ S CPLC QEL+
Sbjct: 433 AICVDDWLRLKSNCPLCIQELQ 454
>gi|387019691|gb|AFJ51963.1| e3 ubiquitin-protein ligase RNF13-like [Crotalus adamanteus]
Length = 381
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 68/137 (49%), Gaps = 14/137 (10%)
Query: 200 SFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG-ASD 258
F H++ I + Y PFL+ + +C + +I + + + A +
Sbjct: 161 EFTYEKGAHIVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLQK 220
Query: 259 DQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
DQ+ +LP ++K+ D E C ICL +Y++ +++R LPCSH +H KCVD
Sbjct: 221 DQLKKLPIHKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVD 268
Query: 319 QWL-RILSCCPLCKQEL 334
WL + CP+CKQ++
Sbjct: 269 PWLTKTKKTCPVCKQKV 285
>gi|327259457|ref|XP_003214553.1| PREDICTED: RING finger protein 165-like [Anolis carolinensis]
Length = 344
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 249 MGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 304
+G+ ++GA + I R +YK+ S E + ++ D +C ICL+ ++ E+VR
Sbjct: 247 LGSVNRGAVQNTIERFTFPHKYKKRRPQGSKAEKEDGEESDTDEKCTICLSMLEDGEDVR 306
Query: 305 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 307 RLPCMHLFHQVCVDQWLATSKKCPICRVDIE 337
>gi|449495146|ref|XP_004159747.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
Length = 180
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 219 ALSYSFPFLLFLLLC---CCVPLISSVLGY---NMNMGAADKGASDDQISRLPSWRYKRV 272
AL F +L LLC C V LI+ N +A++G + LP +RYK
Sbjct: 22 ALESDFVVILAALLCALICMVGLITVARCAWLRRGNQASANRGLKKKILQSLPKFRYK-- 79
Query: 273 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
S + G A EC ICLA++ E EE+R+LP C H FH+ CVD WL S CP C+
Sbjct: 80 -STVGDGKIAA-----ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 133
Query: 332 QEL 334
Q L
Sbjct: 134 QIL 136
>gi|354499654|ref|XP_003511923.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Cricetulus griseus]
gi|344256164|gb|EGW12268.1| RING finger protein 13 [Cricetulus griseus]
Length = 380
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|301111063|ref|XP_002904611.1| transmembrane protein, putative [Phytophthora infestans T30-4]
gi|262095928|gb|EEY53980.1| transmembrane protein, putative [Phytophthora infestans T30-4]
Length = 320
Score = 72.0 bits (175), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 85/171 (49%), Gaps = 21/171 (12%)
Query: 171 MNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFL 230
+++ + L+L WF++GN+WV S ++ L + ++ +SY+ FL L
Sbjct: 143 LSQLKYGLDLAGLFWFLVGNMWVI-SDGARCDDGSAMYQLALWMIV---ISYAKIFLPCL 198
Query: 231 LLCC-------CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAP 283
LL C+P + +L + KGA+ + I +L S Y N P
Sbjct: 199 LLLALLPILCFCLPCVIRLLS-RLQDPMRGKGATKEMIDQLESKTYT--------ANMFP 249
Query: 284 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED CCICL Y+ + +R LPC+H FH +CVD+WL + S CP C++ +
Sbjct: 250 P-EDACCCICLNDYEASQSLRVLPCAHHFHKECVDEWLLVNSTCPTCRKSI 299
>gi|351707128|gb|EHB10047.1| RING finger protein 165 [Heterocephalus glaber]
Length = 280
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 137 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 196
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 197 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 256
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 257 QWLAMSKKCPICRVDIE 273
>gi|449456961|ref|XP_004146217.1| PREDICTED: RING-H2 finger protein ATL80-like [Cucumis sativus]
Length = 181
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 49/123 (39%), Positives = 63/123 (51%), Gaps = 15/123 (12%)
Query: 219 ALSYSFPFLLFLLLC---CCVPLISSVLGY---NMNMGAADKGASDDQISRLPSWRYKRV 272
AL F +L LLC C V LI+ N +A++G + LP +RYK
Sbjct: 22 ALESDFVVILAALLCALICMVGLIAVARCAWLRRGNQASANRGLKKKILQSLPKFRYK-- 79
Query: 273 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
S + G A EC ICLA++ E EE+R+LP C H FH+ CVD WL S CP C+
Sbjct: 80 -STVGDGKIAA-----ECAICLAEFLEGEEIRQLPQCGHCFHVSCVDTWLGTHSSCPSCR 133
Query: 332 QEL 334
Q L
Sbjct: 134 QIL 136
>gi|397520252|ref|XP_003830238.1| PREDICTED: RING finger protein 165 [Pan paniscus]
Length = 279
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 136 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 195
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 196 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 255
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 256 QWLAMSKKCPICRVDIE 272
>gi|296222604|ref|XP_002757254.1| PREDICTED: RING finger protein 165 [Callithrix jacchus]
Length = 346
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 203 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 262
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 263 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 322
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 323 QWLAMSKKCPICRVDIE 339
>gi|157821373|ref|NP_001102914.1| E3 ubiquitin-protein ligase RNF13 precursor [Rattus norvegicus]
gi|81884214|sp|Q66HG0.1|RNF13_RAT RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|51859285|gb|AAH81881.1| Similar to ring finger protein 13 [Rattus norvegicus]
gi|149064725|gb|EDM14876.1| rCG50011, isoform CRA_b [Rattus norvegicus]
gi|149064726|gb|EDM14877.1| rCG50011, isoform CRA_b [Rattus norvegicus]
Length = 380
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|74228963|dbj|BAE21950.1| unnamed protein product [Mus musculus]
Length = 154
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISR 263
++ +Y +P L FL L P +L +G +GA + I R
Sbjct: 12 QMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIER 71
Query: 264 LP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
+YK+ DS + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQ
Sbjct: 72 FTFPHKYKKRRPQDSKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQ 131
Query: 320 WLRILSCCPLCKQELE 335
WL + CP+C+ ++E
Sbjct: 132 WLAMSKKCPICRVDIE 147
>gi|57165361|ref|NP_689683.2| RING finger protein 165 isoform 1 [Homo sapiens]
gi|114672999|ref|XP_529953.2| PREDICTED: RING finger protein 165 isoform 2 [Pan troglodytes]
gi|332236807|ref|XP_003267592.1| PREDICTED: RING finger protein 165 isoform 2 [Nomascus leucogenys]
gi|402903044|ref|XP_003914393.1| PREDICTED: RING finger protein 165 [Papio anubis]
gi|74762404|sp|Q6ZSG1.1|RN165_HUMAN RecName: Full=RING finger protein 165
gi|34534391|dbj|BAC86992.1| unnamed protein product [Homo sapiens]
gi|60738654|tpg|DAA05330.1| TPA_inf: putative ubiquitin ligase component [Homo sapiens]
Length = 346
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 203 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 262
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 263 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 322
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 323 QWLAMSKKCPICRVDIE 339
>gi|410921626|ref|XP_003974284.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Takifugu
rubripes]
Length = 379
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPS 266
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 168 HVVLMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLHKDQLKKLPI 227
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
+YK+ DS C ICL +Y+E +++R LPCSH +H KCVD WL +
Sbjct: 228 HKYKKGDSY------------DVCAICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKK 275
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 276 TCPVCKQKV 284
>gi|291394329|ref|XP_002713561.1| PREDICTED: ring finger protein 165 [Oryctolagus cuniculus]
Length = 347
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 263
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|403265414|ref|XP_003924935.1| PREDICTED: RING finger protein 165 [Saimiri boliviensis
boliviensis]
Length = 400
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 257 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 316
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 317 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 376
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 377 QWLAMSKKCPICRVDIE 393
>gi|164663850|ref|NP_001106884.1| E3 ubiquitin-protein ligase RNF13 isoform a precursor [Mus
musculus]
gi|341941985|sp|O54965.2|RNF13_MOUSE RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|34849794|gb|AAH58182.1| Rnf13 protein [Mus musculus]
gi|74192298|dbj|BAE34334.1| unnamed protein product [Mus musculus]
gi|148703375|gb|EDL35322.1| ring finger protein 13, isoform CRA_b [Mus musculus]
gi|148703379|gb|EDL35326.1| ring finger protein 13, isoform CRA_b [Mus musculus]
Length = 381
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|2746335|gb|AAC03770.1| RING zinc finger protein [Mus musculus]
Length = 381
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|348576884|ref|XP_003474215.1| PREDICTED: RING finger protein 165-like [Cavia porcellus]
Length = 336
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 193 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 252
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 253 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 312
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 313 QWLAMSKKCPICRVDIE 329
>gi|47210135|emb|CAF95584.1| unnamed protein product [Tetraodon nigroviridis]
Length = 363
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 2/89 (2%)
Query: 249 MGAADKGASDDQISRL--PSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 306
+G+ +GA I R P KR L+ G + D +C ICL+ ++ E+VR+L
Sbjct: 268 LGSVSRGAVQTTIERFTFPHKYKKRKPLQLKIGGEEETDVDEKCTICLSMLEDGEDVRRL 327
Query: 307 PCSHMFHLKCVDQWLRILSCCPLCKQELE 335
PC H+FH CVDQWL CP+C+ ++E
Sbjct: 328 PCMHLFHQGCVDQWLATSRKCPICRVDIE 356
>gi|149064727|gb|EDM14878.1| rCG50011, isoform CRA_c [Rattus norvegicus]
Length = 353
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 142 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 201
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 202 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 249
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 250 TCPVCKQKV 258
>gi|198454685|ref|XP_001359674.2| GA19959 [Drosophila pseudoobscura pseudoobscura]
gi|198132908|gb|EAL28824.2| GA19959 [Drosophila pseudoobscura pseudoobscura]
Length = 1343
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 15/113 (13%)
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAA--DKGASDDQISR--LPSWRYKRVDSNLEAGNSAP 283
L L + PL LG + +GAA ++GA+ + I R LP +Y+R+ E+
Sbjct: 1219 LHLEIGLATPL---SLGSRIVIGAARPNRGATLETIERNTLP-HKYRRLRRPSES----- 1269
Query: 284 ANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+ED E C ICL+ ++ + +VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1270 -DEDAEKCAICLSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE 1321
>gi|380799985|gb|AFE71868.1| RING finger protein 165, partial [Macaca mulatta]
Length = 193
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 50 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 109
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 110 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 169
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 170 QWLAMSKKCPICRVDIE 186
>gi|195157042|ref|XP_002019405.1| GL12252 [Drosophila persimilis]
gi|194115996|gb|EDW38039.1| GL12252 [Drosophila persimilis]
Length = 1345
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 15/113 (13%)
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAA--DKGASDDQISR--LPSWRYKRVDSNLEAGNSAP 283
L L + PL LG + +GAA ++GA+ + I R LP +Y+R+ E+
Sbjct: 1221 LHLEIGLATPL---SLGSRIVIGAARPNRGATLETIERNTLP-HKYRRLRRPSES----- 1271
Query: 284 ANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+ED E C ICL+ ++ + +VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1272 -DEDAEKCAICLSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE 1323
>gi|355701932|gb|EHH29285.1| RING finger protein 165, partial [Macaca mulatta]
Length = 326
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 183 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 242
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 243 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 302
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 303 QWLAMSKKCPICRVDIE 319
>gi|444728898|gb|ELW69332.1| RING finger protein 165, partial [Tupaia chinensis]
Length = 327
Score = 71.2 bits (173), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 184 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 243
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 244 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 303
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 304 QWLAMSKKCPICRVDIE 320
>gi|348581670|ref|XP_003476600.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Cavia porcellus]
Length = 396
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 184 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLGKDQLKKLPV 243
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 244 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 291
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 292 TCPVCKQKV 300
>gi|355755011|gb|EHH58878.1| RING finger protein 165, partial [Macaca fascicularis]
Length = 326
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 183 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 242
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 243 RFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 302
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 303 QWLAMSKKCPICRVDIE 319
>gi|334325346|ref|XP_001371377.2| PREDICTED: RING finger protein 165-like [Monodelphis domestica]
Length = 492
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVP---------LISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 358 NYPYPQLHFLALQGLNPNRHTSAVRESYEELLQLEDRLGNVSRGAVQNTIERFTFPHKYK 417
Query: 271 RVDSNLEAGNSAPANE---DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ G E D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 418 KRRPQEGKGKKEDGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 477
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 478 PICRVDIE 485
>gi|392345650|ref|XP_003749329.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Rattus
norvegicus]
Length = 278
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 67 HVILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 126
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 127 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 174
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 175 TCPVCKQKV 183
>gi|348535847|ref|XP_003455409.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Oreochromis
niloticus]
Length = 381
Score = 70.9 bits (172), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 68/129 (52%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 168 HVVLLPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPI 227
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
+YK+ D N + C ICL +Y+E +++R LPCSH +H KCVD WL +
Sbjct: 228 HKYKKGD-NYDV-----------CAICLDEYEEGDKLRVLPCSHAYHSKCVDPWLTKTKK 275
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 276 TCPVCKQKV 284
>gi|148703376|gb|EDL35323.1| ring finger protein 13, isoform CRA_c [Mus musculus]
Length = 354
Score = 70.9 bits (172), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 142 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 201
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 202 HKFKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 249
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 250 TCPVCKQKV 258
>gi|195640466|gb|ACG39701.1| protein binding protein [Zea mays]
Length = 268
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
++G+ D+G SD+ IS L W+YK +G + +C ICL+ ++ +E + LP
Sbjct: 184 SVGSEDRGLSDELISYLQPWKYK------ASGFFSRKTNHDDCPICLSTFRNRETMITLP 237
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WLR+ CP+CK EL
Sbjct: 238 CMHHYHAACVTKWLRVNKTCPVCKYEL 264
>gi|45382515|ref|NP_990686.1| E3 ubiquitin-protein ligase RNF13 precursor [Gallus gallus]
gi|21362882|sp|Q90972.1|RNF13_CHICK RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName:
Full=C-RZF; AltName: Full=RING finger protein 13; Flags:
Precursor
gi|1321818|emb|CAA64725.1| RING zinc finger protein [Gallus gallus]
gi|60116919|gb|AAX14391.1| RING finger protein 13 [Gallus gallus]
gi|1589724|prf||2211437A RING finger protein
Length = 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|194221716|ref|XP_001491239.2| PREDICTED: e3 ubiquitin-protein ligase RNF13 [Equus caballus]
Length = 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H+L + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HILLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRVLPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|432854518|ref|XP_004067940.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Oryzias latipes]
Length = 375
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 67/138 (48%), Gaps = 14/138 (10%)
Query: 199 GSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-S 257
G + HV+ I + Y PFLL + +C + + + + A K
Sbjct: 159 GDYMYDKGGHVVLIPDFSLPLEYYLLPFLLIVAICLILIAVFMITKAVQDCRKAWKSRLR 218
Query: 258 DDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
DQ+ +LP +Y++ DS C ICL +Y+E +++R LPCSH +H KCV
Sbjct: 219 KDQLKKLPIHKYQKGDSY------------DVCAICLDEYEEGDKLRVLPCSHAYHSKCV 266
Query: 318 DQWL-RILSCCPLCKQEL 334
D WL + CP+CKQ++
Sbjct: 267 DPWLTKTKKTCPVCKQKV 284
>gi|209881414|ref|XP_002142145.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557751|gb|EEA07796.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 413
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 245 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAG-NSAPANEDPECCICLAKYKEKEEV 303
+ M ++G ++D I + S + S L+ G NS P++E P C +CL++ E V
Sbjct: 322 FGMADANNNRGVNNDVILTI-SQKAFIYHSQLQVGSNSEPSDEPPMCTVCLSEVNNGENV 380
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
KL C H+FHL+C+ +WLR+ CPLCK ++
Sbjct: 381 VKLNCQHLFHLQCIQEWLRMSVICPLCKVDV 411
>gi|41054856|ref|NP_957338.1| ring finger protein 13 [Danio rerio]
gi|27881904|gb|AAH44449.1| Ring finger protein 13 [Danio rerio]
Length = 377
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 169 HVILMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ DS C ICL +Y+E E +R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGDSY------------DVCAICLDEYEEGERLRVLPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|118349920|ref|XP_001008241.1| Zinc finger, C3HC4 type [Tetrahymena thermophila]
gi|89290008|gb|EAR87996.1| Zinc finger, C3HC4 type [Tetrahymena thermophila SB210]
Length = 779
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 42/71 (59%), Gaps = 8/71 (11%)
Query: 264 LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRI 323
+P+ YK +D N +E EC ICL YKE+++VR C H++H C+DQWL
Sbjct: 304 MPAMFYKEIDLN--------KDEQEECTICLEGYKEEDKVRISICGHLYHQACIDQWLVA 355
Query: 324 LSCCPLCKQEL 334
+ CP C+QEL
Sbjct: 356 HTNCPYCRQEL 366
>gi|351705693|gb|EHB08612.1| RING finger protein 13 [Heterocephalus glaber]
Length = 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG-ASDDQISRLPS 266
H++ + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFNLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLGKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|410913211|ref|XP_003970082.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Takifugu
rubripes]
Length = 1006
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 50/175 (28%), Positives = 73/175 (41%), Gaps = 18/175 (10%)
Query: 175 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 234
RT+ EL S + P LH + L+Y + +
Sbjct: 829 RTAWELGLETVAPYAPSGHLHSHLPPYHPPPRLHHFPFMHTGISELTYPHIRYISSRMTG 888
Query: 235 CVPLISSVLGYNMNMGAADKGASDDQISRLP-SWRYKRV-----------DSNLEAGNSA 282
+L +G ++GAS I R +YK+V + E G
Sbjct: 889 FGRTYEDLLHLEERLGTVNRGASQGTIERCTYPHKYKKVSRFACSRKLHDKQDEEEG--- 945
Query: 283 PANEDPE--CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
A+ED E C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 946 -ADEDTEEKCTICLSILEEGEDVRRLPCMHLFHQLCVDQWLVTNKKCPICRVDIE 999
>gi|41351101|gb|AAH65620.1| Ring finger protein 13 [Danio rerio]
Length = 377
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 169 HVILMPDFSLPLEYYLIPFLIIVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ DS C ICL +Y+E E +R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGDSY------------DVCAICLDEYEEGERLRVLPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|432108101|gb|ELK33079.1| RING finger protein 165 [Myotis davidii]
Length = 362
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 65/128 (50%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVP--LISSV-------LGYNMNMGAADKGASDDQISRL--PSWRY 269
+Y +P L FL L P IS+V L +G +GA + I R P
Sbjct: 228 NYPYPQLHFLALQGLNPSRHISAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 287
Query: 270 KRVDSNLEAGNSAP--ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
KR N + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 288 KRRPQNGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 347
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 348 PICRVDIE 355
>gi|47230399|emb|CAF99592.1| unnamed protein product [Tetraodon nigroviridis]
Length = 469
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 73/176 (41%), Gaps = 15/176 (8%)
Query: 175 RTSLELFFAIWFVMGNVWVFDSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCC 234
RT+ EL S + P LH + L+Y + +
Sbjct: 287 RTAWELGIETVAPYPPAGHLHSHLPPYHPPPRLHHFPFMHAGISELTYPHIRYISSRMTG 346
Query: 235 CVPLISSVLGYNMNMGAADKGASDDQISRLP-SWRYKRVDSNLEA------------GNS 281
+L +G ++GAS I R +YK+V ++ A
Sbjct: 347 FGRTYEDLLHLEERLGTVNRGASQGTIERCTYPHKYKKVSPHVSAVCPQQRKLHSKQDED 406
Query: 282 APANEDPE--CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
A+ED E C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 407 EGADEDTEEKCTICLSILEEGEDVRRLPCMHLFHQLCVDQWLVTNKKCPICRVDIE 462
>gi|377520133|ref|NP_001243687.1| RING finger protein 165 isoform 2 [Homo sapiens]
gi|410052644|ref|XP_003953329.1| PREDICTED: RING finger protein 165 isoform 1 [Pan troglodytes]
gi|426385861|ref|XP_004059416.1| PREDICTED: RING finger protein 165 [Gorilla gorilla gorilla]
gi|441602936|ref|XP_004087767.1| PREDICTED: RING finger protein 165 [Nomascus leucogenys]
gi|193783761|dbj|BAG53743.1| unnamed protein product [Homo sapiens]
Length = 154
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 65/136 (47%), Gaps = 13/136 (9%)
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISR 263
++ +Y +P L FL L P +L +G +GA + I R
Sbjct: 12 QMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIER 71
Query: 264 LP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
+YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQ
Sbjct: 72 FTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQ 131
Query: 320 WLRILSCCPLCKQELE 335
WL + CP+C+ ++E
Sbjct: 132 WLAMSKKCPICRVDIE 147
>gi|326926239|ref|XP_003209310.1| PREDICTED: e3 ubiquitin-protein ligase RNF13-like [Meleagris
gallopavo]
Length = 381
Score = 70.5 bits (171), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|363743996|ref|XP_414696.3| PREDICTED: RING finger protein 165 [Gallus gallus]
Length = 401
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 249 MGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 304
+G+ +GA + I R +YK+ + E + ++ D +C ICL+ ++ E+VR
Sbjct: 304 LGSVSRGAVQNTIERFTFPHKYKKRRPQEGKAEQEDGEESDTDEKCTICLSMLEDGEDVR 363
Query: 305 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 364 RLPCMHLFHQVCVDQWLATSKKCPICRVDIE 394
>gi|449514096|ref|XP_002195312.2| PREDICTED: RING finger protein 165 [Taeniopygia guttata]
Length = 372
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 249 MGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 304
+G+ +GA + I R +YK+ + E + ++ D +C ICL+ ++ E+VR
Sbjct: 275 LGSVSRGAVQNTIERFTFPHKYKKRRPQEGKAEQDDGEESDTDEKCTICLSMLEDGEDVR 334
Query: 305 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 335 RLPCMHLFHQVCVDQWLATSKKCPICRVDIE 365
>gi|224061170|ref|XP_002189845.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Taeniopygia guttata]
Length = 381
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ I + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|223943525|gb|ACN25846.1| unknown [Zea mays]
gi|413953444|gb|AFW86093.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 268
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
++G+ D+G SD+ IS L W+YK +G + +C ICL+ ++ +E + LP
Sbjct: 184 SVGSEDRGLSDELISYLQPWKYK------ASGFFSRKTNHDDCPICLSTFRNRETMITLP 237
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WLR+ CP+CK EL
Sbjct: 238 CMHHYHAACVTKWLRVNKTCPVCKYEL 264
>gi|195605866|gb|ACG24763.1| protein binding protein [Zea mays]
Length = 268
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 6/87 (6%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
++G+ D+G SD+ IS L W+YK S N D +C ICL+ ++ +E + LP
Sbjct: 184 SVGSEDRGLSDELISYLQPWKYK-----ASGFFSRKTNHD-DCPICLSTFRNRETMITLP 237
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WLR+ CP+CK EL
Sbjct: 238 CMHHYHAACVTKWLRVNKTCPVCKYEL 264
>gi|350578446|ref|XP_003480368.1| PREDICTED: RING finger protein 165-like [Sus scrofa]
Length = 345
Score = 70.1 bits (170), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 50/198 (25%), Positives = 80/198 (40%), Gaps = 30/198 (15%)
Query: 168 SHLMNKCRTSLELFFAIWFVMG------------NVWVFDSRFGSFQRAPNLHVL----- 210
SH M C++ L L F V + + P +H
Sbjct: 141 SHRMGLCQSQLSLHLEACFRQDLSVDAGLSPAQFQVRPIPQHYQHYLATPRMHHFPRNSS 200
Query: 211 CISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQI 261
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 201 STQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTI 260
Query: 262 SRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CV
Sbjct: 261 ERFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCV 320
Query: 318 DQWLRILSCCPLCKQELE 335
DQWL + CP+C+ ++E
Sbjct: 321 DQWLAMSKKCPICRVDIE 338
>gi|301119555|ref|XP_002907505.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262106017|gb|EEY64069.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 551
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 55/94 (58%), Gaps = 9/94 (9%)
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLEAGN--------SAPANEDPECCICLAKYKEKE 301
A +G + +++ +L +Y R + N E+ + NED C ICL ++++ E
Sbjct: 434 AAVVRGVTKERLDQLRITKYNRAERNPESPTELLSPTSVGSIENEDI-CPICLIEFEDGE 492
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+VR LPC H+FH+ C+D+WL+ + CP+CK ++
Sbjct: 493 DVRNLPCKHIFHVACIDEWLKRNTSCPMCKSNVD 526
>gi|293336774|ref|NP_001168563.1| uncharacterized protein LOC100382345 [Zea mays]
gi|223949189|gb|ACN28678.1| unknown [Zea mays]
gi|413924038|gb|AFW63970.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 310
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 239 ISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 298
+ + G A +G D I LP++ Y++ ++L APA+E C +CL +++
Sbjct: 108 VRTSTGGTPASSAEPRGLEDAVIRALPAFSYRKKPADLPPSAPAPASE---CAVCLGEFE 164
Query: 299 EKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
E + VR LP C H+FH+ CVD WL+ + CPLC+
Sbjct: 165 EGDSVRMLPACLHVFHVGCVDAWLQGNASCPLCR 198
>gi|297275258|ref|XP_001090387.2| PREDICTED: hypothetical protein LOC702104 [Macaca mulatta]
Length = 634
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 66/143 (46%), Gaps = 13/143 (9%)
Query: 206 NLHVLCISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGA 256
V I + +Y +P L FL L P +L +G +GA
Sbjct: 485 QFQVRPIPXVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGA 544
Query: 257 SDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMF 312
+ I R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+F
Sbjct: 545 VQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLF 604
Query: 313 HLKCVDQWLRILSCCPLCKQELE 335
H CVDQWL + CP+C+ ++E
Sbjct: 605 HQLCVDQWLAMSKKCPICRVDIE 627
>gi|328708855|ref|XP_003243816.1| PREDICTED: hypothetical protein LOC100573509 isoform 1
[Acyrthosiphon pisum]
gi|328708857|ref|XP_003243817.1| PREDICTED: hypothetical protein LOC100573509 isoform 2
[Acyrthosiphon pisum]
Length = 760
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 54/87 (62%), Gaps = 11/87 (12%)
Query: 253 DKGASDDQISR--LPSWRYKRVD--SNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
++GAS D I + P +YKR+ S+ N+ +C ICL+ +++ E+VR+LPC
Sbjct: 658 NRGASKDTIEKNTFP-HKYKRIKRSSDEMEDNTE------KCTICLSDFEDTEDVRRLPC 710
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH+ C+DQWL CP+C+ ++E
Sbjct: 711 MHLFHVDCIDQWLSSNKRCPICRVDIE 737
>gi|301765498|ref|XP_002918178.1| PREDICTED: RING finger protein 165-like [Ailuropoda melanoleuca]
Length = 369
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 235 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 294
Query: 271 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 295 KRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 354
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 355 PICRVDIE 362
>gi|426218145|ref|XP_004003310.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Ovis aries]
Length = 380
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|189522117|ref|XP_701217.3| PREDICTED: RING finger protein 165 [Danio rerio]
Length = 347
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 72/163 (44%), Gaps = 17/163 (10%)
Query: 190 NVWVFDSRFGSFQRAPNLH-----VLCISLLAWNALSYSFPFLLFLLLCCCVPL------ 238
++ + + +P LH ++ +Y +P L L L P
Sbjct: 178 HISPLTQHYQHYLTSPRLHHFPRNTTSAQVVVHEIRNYPYPQLHLLALQSLSPSRHATAV 237
Query: 239 ---ISSVLGYNMNMGAADKGASDDQISRL--PSWRYKRVDSNLEAG-NSAPANEDPECCI 292
+L +G ++GA I R P KR L+ G + + D +C I
Sbjct: 238 RESYEELLQLEDRLGNVNRGAVQATIERFTFPHKYKKRRPLELKIGMDEEELDTDEKCTI 297
Query: 293 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
CL+ +++E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 298 CLSMLEDEEDVRRLPCMHLFHQACVDQWLATNKKCPICRVDIE 340
>gi|115497538|ref|NP_001069610.1| E3 ubiquitin-protein ligase RNF13 precursor [Bos taurus]
gi|122143536|sp|Q0VD51.1|RNF13_BOVIN RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|111308417|gb|AAI19834.1| Ring finger protein 13 [Bos taurus]
gi|296491071|tpg|DAA33154.1| TPA: ring finger protein 13 [Bos taurus]
gi|440896858|gb|ELR48673.1| E3 ubiquitin-protein ligase RNF13 [Bos grunniens mutus]
Length = 380
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|74191108|dbj|BAE39388.1| unnamed protein product [Mus musculus]
Length = 381
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + L+ Y PFL+ + +C + +I + + + + DQ+ +LP
Sbjct: 169 HIILVPELSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRNRRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
+ K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKIKKGD------------EYDVCAICLEEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|355716766|gb|AES05716.1| ring finger protein 13 [Mustela putorius furo]
Length = 380
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|301776154|ref|XP_002923497.1| PREDICTED: RING finger protein 13-like [Ailuropoda melanoleuca]
gi|281353739|gb|EFB29323.1| hypothetical protein PANDA_012636 [Ailuropoda melanoleuca]
Length = 381
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|57103676|ref|XP_534303.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Canis lupus
familiaris]
Length = 381
Score = 69.7 bits (169), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|388502038|gb|AFK39085.1| unknown [Lotus japonicus]
Length = 89
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 40/62 (64%), Gaps = 6/62 (9%)
Query: 276 LEAGNSAPANE------DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 329
LE G PANE D ECCIC++ Y++ E+ LPC+H FH C+ +WL++ + CPL
Sbjct: 18 LETGIGFPANERALSPEDAECCICISSYEDGAELHSLPCNHHFHSTCIVKWLKMNATCPL 77
Query: 330 CK 331
CK
Sbjct: 78 CK 79
>gi|345802719|ref|XP_547590.3| PREDICTED: RING finger protein 165 [Canis lupus familiaris]
Length = 347
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 204 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 263
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 264 RFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 323
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 324 QWLAMSKKCPICRVDIE 340
>gi|410971206|ref|XP_003992063.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Felis catus]
Length = 381
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|328776000|ref|XP_001122053.2| PREDICTED: hypothetical protein LOC726305 [Apis mellifera]
Length = 630
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 81/155 (52%), Gaps = 24/155 (15%)
Query: 197 RFGSFQRAP---NLHVLCISLLAWNALSYS-----FPFLLFLLLCCCVPLISSVLGY--- 245
+G +R P + H + I+ L L S PF F LL P+ + + Y
Sbjct: 473 HYGPHRRPPGPQHRHHIHINWLQHLHLQGSDAHDTMPFSSFGLLHPARPMSAQLENYMRL 532
Query: 246 -NM-NMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEK 300
N+ +M + GA+ + I S ++YKR + +E NED +C ICL+++++
Sbjct: 533 VNLRHMAHINCGATQESIESHTFRYKYKR-EKKVE-------NEDSIEKCTICLSEFEDC 584
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
E VR+LPC H+FH+ CVDQWL CP+C+ ++E
Sbjct: 585 ESVRRLPCMHLFHIDCVDQWLCTNKRCPICRVDIE 619
>gi|410977656|ref|XP_003995218.1| PREDICTED: RING finger protein 165 [Felis catus]
Length = 344
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 201 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 260
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 261 RFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 320
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 321 QWLAMSKKCPICRVDIE 337
>gi|281346415|gb|EFB21999.1| hypothetical protein PANDA_006572 [Ailuropoda melanoleuca]
Length = 326
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 183 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 242
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 243 RFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVD 302
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 303 QWLAMSKKCPICRVDIE 319
>gi|294935942|ref|XP_002781567.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239892404|gb|EER13362.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 365
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 252 ADKGASDDQISRLPSWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEK-EEVRKLP 307
A +GAS D I ++P+ +Y VD A S P NE C IC Y + +E++ P
Sbjct: 268 AKRGASPDVIDKIPTVQYDSTLFVDDQNSADGSHPLNE---CSICFQNYSDSTDEIKHTP 324
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQELER 336
C H FH C+ WL + CPLC+ + E
Sbjct: 325 CDHYFHKSCLAHWLNTATTCPLCRSDFEE 353
>gi|291399975|ref|XP_002716309.1| PREDICTED: ring finger protein 13 [Oryctolagus cuniculus]
Length = 381
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRSRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|294887191|ref|XP_002772001.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239875909|gb|EER03817.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 365
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 46/89 (51%), Gaps = 7/89 (7%)
Query: 252 ADKGASDDQISRLPSWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEK-EEVRKLP 307
A +GAS D I ++P+ +Y VD A S P NE C IC Y + +E++ P
Sbjct: 268 AKRGASPDVIDKIPTVQYDSTLFVDDQNSADGSHPLNE---CSICFQNYSDSTDEIKHTP 324
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQELER 336
C H FH C+ WL + CPLC+ + E
Sbjct: 325 CDHYFHKSCLAHWLNTATTCPLCRSDFEE 353
>gi|344269880|ref|XP_003406775.1| PREDICTED: RING finger protein 165-like [Loxodonta africana]
Length = 504
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 370 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 429
Query: 271 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 430 KRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 489
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 490 PICRVDIE 497
>gi|255582096|ref|XP_002531843.1| ring finger protein, putative [Ricinus communis]
gi|223528514|gb|EEF30541.1| ring finger protein, putative [Ricinus communis]
Length = 205
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 57/97 (58%), Gaps = 12/97 (12%)
Query: 240 SSVLGYNMN-MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 298
S+V N+N A D+G +S++P +Y E+G + P + C ICL ++
Sbjct: 85 SAVQAANLNPEQAIDRGIKKQSLSQIPEVKY-------ESGLNIPVTD---CPICLGEFA 134
Query: 299 EKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
E E+VR LP C+H FH+KC+D+W+ S CPLC+Q L
Sbjct: 135 EGEKVRVLPKCNHGFHVKCIDKWILSHSSCPLCRQPL 171
>gi|350591630|ref|XP_003358656.2| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Sus scrofa]
gi|417515473|gb|JAA53565.1| ring finger protein 13 [Sus scrofa]
Length = 381
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|325183549|emb|CCA18010.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 849
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G S I +LP+++Y V NL+ P ++P+C IC + ++E ++V+ LPC H +H
Sbjct: 767 RGVSQSLIDQLPTYQYTAV-HNLQ--QELPKVKNPDCLICRSAFREGDKVKSLPCFHSYH 823
Query: 314 LKCVDQWLRILSCCPLCK 331
+CVD WL + CPLC+
Sbjct: 824 KRCVDAWLSLSQVCPLCQ 841
>gi|417399951|gb|JAA46956.1| Putative e3 ubiquitin-protein ligase rnf13 isoform 1 [Desmodus
rotundus]
Length = 381
Score = 69.3 bits (168), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|428174163|gb|EKX43061.1| hypothetical protein GUITHDRAFT_61154, partial [Guillardia theta
CCMP2712]
Length = 73
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 46/79 (58%), Gaps = 6/79 (7%)
Query: 256 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLK 315
AS+ QISRLP R++ A E ECCICL +Y E++RKLPC H FH
Sbjct: 1 ASEGQISRLPFERFE------PATGKGSGEEATECCICLCEYDVGEKLRKLPCLHRFHSV 54
Query: 316 CVDQWLRILSCCPLCKQEL 334
CVD+WL CP+CK+ +
Sbjct: 55 CVDRWLLSNKMCPICKESI 73
>gi|357483919|ref|XP_003612246.1| RING-H2 finger protein ATL4M [Medicago truncatula]
gi|355513581|gb|AES95204.1| RING-H2 finger protein ATL4M [Medicago truncatula]
gi|388507050|gb|AFK41591.1| unknown [Medicago truncatula]
Length = 234
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 8/85 (9%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
KG S D +S++P + K N+EA + E C +CL ++ E VR LP C
Sbjct: 157 GGSKGLSVDSVSKIP--KIKITADNIEA-----SGEKVSCSVCLQDFQLGETVRSLPHCH 209
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
HMFHL C+D WL CPLC+++L
Sbjct: 210 HMFHLPCIDMWLLRHGSCPLCRRDL 234
>gi|410922910|ref|XP_003974925.1| PREDICTED: RING finger protein 165-like [Takifugu rubripes]
Length = 354
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/163 (25%), Positives = 73/163 (44%), Gaps = 17/163 (10%)
Query: 190 NVWVFDSRFGSFQRAPNLHVL-----CISLLAWNALSYSFPFLLFLLLCCCVPL------ 238
++ + + +P +H ++ +Y +P L L L P
Sbjct: 185 HIHPLPQHYQHYLTSPRMHHFPRNNASTQVVVHEIRNYPYPQLHLLALQSLNPSRHASAV 244
Query: 239 ---ISSVLGYNMNMGAADKGASDDQISRL--PSWRYKRVDSNLEAG-NSAPANEDPECCI 292
+L +G+ ++GA I R P KR+ +L+ + + D +C I
Sbjct: 245 RESYEELLQLEDRLGSVNRGAVQTTIERFTFPHKYKKRIPQDLKMCLDDEELDTDEKCTI 304
Query: 293 CLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
CL+ ++ E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 305 CLSMLEDGEDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIE 347
>gi|344288944|ref|XP_003416206.1| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Loxodonta
africana]
Length = 381
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|224084358|ref|XP_002307271.1| predicted protein [Populus trichocarpa]
gi|222856720|gb|EEE94267.1| predicted protein [Populus trichocarpa]
Length = 650
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 50/85 (58%), Gaps = 8/85 (9%)
Query: 249 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
MG G S+D I + L W+Y+ V AG S+ +ED CCIC +Y +++++ KL
Sbjct: 568 MGNVSTGLSEDAIVANLKRWKYQTV-----AGGSS--SEDEPCCICQEEYADEDDLGKLK 620
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQ 332
C H FH C+ +WL + CP+CK+
Sbjct: 621 CGHDFHFNCIKKWLVQKNNCPICKK 645
>gi|395527967|ref|XP_003766107.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Sarcophilus harrisii]
Length = 382
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|126338112|ref|XP_001363895.1| PREDICTED: e3 ubiquitin-protein ligase RNF13 [Monodelphis
domestica]
Length = 382
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|194214648|ref|XP_001498671.2| PREDICTED: RING finger protein 165-like [Equus caballus]
Length = 407
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 273 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 332
Query: 271 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 333 KRRPQDGKGKKEEGEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 392
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 393 PICRVDIE 400
>gi|145507746|ref|XP_001439828.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124407023|emb|CAK72431.1| unnamed protein product [Paramecium tetraurelia]
Length = 360
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 53/96 (55%), Gaps = 11/96 (11%)
Query: 240 SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKE 299
+L +G KG + QI +LP KR N A ED +C +CL ++KE
Sbjct: 242 EQLLELEEQIGNVPKGLTKQQIKQLP----KR------TLNQANIPED-KCSVCLFEFKE 290
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E+VR+LPC H++H C+ WL+ CPLCK E+E
Sbjct: 291 EEKVRELPCKHIYHSSCIKNWLQNNKQCPLCKTEIE 326
>gi|224088216|ref|XP_002308375.1| predicted protein [Populus trichocarpa]
gi|222854351|gb|EEE91898.1| predicted protein [Populus trichocarpa]
Length = 535
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 48/75 (64%), Gaps = 7/75 (9%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+ P +K+VD GN +ED +C ICLA+Y+E +++R LPC H +H+ CVD+W
Sbjct: 450 VDSFPLKNHKKVDK--VEGN----DEDEQCYICLAEYEEGDKIRVLPCHHEYHMACVDKW 503
Query: 321 LR-ILSCCPLCKQEL 334
L+ I CPLC+ ++
Sbjct: 504 LKEIHGVCPLCRGDV 518
>gi|21536693|gb|AAM61025.1| unknown [Arabidopsis thaliana]
Length = 340
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D I+ LPS RYK E N NE C IC Y++ E++ LPC
Sbjct: 255 VGTESRGLSADTIASLPSKRYK------EGDNQNGTNE--SCVICRLDYEDDEDLILLPC 306
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H +C++ WL+I CP+C E+
Sbjct: 307 KHSYHSECINNWLKINKVCPVCSAEV 332
>gi|18402411|ref|NP_566651.1| E3 ubiquitin ligase BIG BROTHER-like protein [Arabidopsis thaliana]
gi|75335434|sp|Q9LT17.1|BBR_ARATH RecName: Full=E3 ubiquitin ligase BIG BROTHER-related; Short=AtBBR
gi|11994203|dbj|BAB01306.1| unnamed protein product [Arabidopsis thaliana]
gi|15010578|gb|AAK73948.1| AT3g19910/MPN9_15 [Arabidopsis thaliana]
gi|15028363|gb|AAK76658.1| unknown protein [Arabidopsis thaliana]
gi|19310707|gb|AAL85084.1| unknown protein [Arabidopsis thaliana]
gi|332642786|gb|AEE76307.1| E3 ubiquitin ligase BIG BROTHER-like protein [Arabidopsis thaliana]
Length = 340
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D I+ LPS RYK E N NE C IC Y++ E++ LPC
Sbjct: 255 VGTESRGLSADTIASLPSKRYK------EGDNQNGTNE--SCVICRLDYEDDEDLILLPC 306
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H +C++ WL+I CP+C E+
Sbjct: 307 KHSYHSECINNWLKINKVCPVCSAEV 332
>gi|348517369|ref|XP_003446206.1| PREDICTED: RING finger protein 165-like [Oreochromis niloticus]
Length = 351
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 33/90 (36%), Positives = 53/90 (58%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRL--PSWRYKRVDSNLEAG-NSAPANEDPECCICLAKYKEKEEVRK 305
+G+ ++GA I R P KR+ +L+ + + D +C ICL+ ++ E+VR+
Sbjct: 255 LGSVNRGAVQTTIERFTFPHKYKKRIPQDLKMCLDDEELDTDEKCTICLSMLEDGEDVRR 314
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 315 LPCMHLFHQACVDQWLATSRKCPICRVDIE 344
>gi|297830656|ref|XP_002883210.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329050|gb|EFH59469.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 337
Score = 68.9 bits (167), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/86 (38%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D I+ LPS RYK E N NE C IC Y++ E++ LPC
Sbjct: 252 VGTESRGLSADTIASLPSKRYK------EGDNQNGTNE--SCVICRLDYEDDEDLILLPC 303
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H +C++ WL+I CP+C E+
Sbjct: 304 KHSYHSECINNWLKINKVCPVCSAEV 329
>gi|357127647|ref|XP_003565490.1| PREDICTED: RING-H2 finger protein ATL5-like [Brachypodium
distachyon]
Length = 210
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 25/143 (17%)
Query: 209 VLCISLLAWNALSYSFPFLLFLLLCCCV-----------PLISSVLGYNMN----MGAAD 253
VL +++ AL+ F L LL CC +++ + +MN +G++
Sbjct: 28 VLLAAVVILFALTVVFVALRVLLYMCCAFGGGGSRGRGGGGLAAGIRRSMNSFGRIGSSR 87
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G +S LP Y++ S A D EC +CL++ + ++VR+LP C H+F
Sbjct: 88 RGLDASALSALPVTAYQK---------STGAAGDAECAVCLSELADGDKVRELPNCGHVF 138
Query: 313 HLKCVDQWLRILSCCPLCKQELE 335
H++CVD WLR + CPLC+ E
Sbjct: 139 HVECVDAWLRSRTTCPLCRAGAE 161
>gi|440908835|gb|ELR58817.1| RING finger protein 165, partial [Bos grunniens mutus]
Length = 354
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 65/137 (47%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L FL L P +L +G +GA + I
Sbjct: 211 TQMVVHEIRNYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIE 270
Query: 263 RLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R +YK+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 271 RFTFPHKYKKRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVD 330
Query: 319 QWLRILSCCPLCKQELE 335
QWL + CP+C+ ++E
Sbjct: 331 QWLAMSKKCPICRVDIE 347
>gi|410903686|ref|XP_003965324.1| PREDICTED: RING finger protein 165-like [Takifugu rubripes]
Length = 340
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/127 (31%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRL--PSWRY 269
+Y +P L L L P +L +G+ +GA I R P
Sbjct: 207 NYPYPQLHLLALQSLNPSRHATAVRESYEELLQLEDRLGSVSRGAVQTTIERFTFPHKYK 266
Query: 270 KRVDSNLEAGNSAPANE-DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 328
KR ++ G + D C ICL+ ++ E+VR+LPC H+FH CVDQWL CP
Sbjct: 267 KRKPMQMKIGEEEEETDVDERCTICLSMLEDGEDVRRLPCMHLFHQGCVDQWLATSRKCP 326
Query: 329 LCKQELE 335
+C+ ++E
Sbjct: 327 ICRVDIE 333
>gi|195037839|ref|XP_001990368.1| GH19305 [Drosophila grimshawi]
gi|193894564|gb|EDV93430.1| GH19305 [Drosophila grimshawi]
Length = 885
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS++Y N EA N + C +C+ ++ ++ +R LPCSH
Sbjct: 757 AKPRGLTRNEIDQLPSYKY-----NPEAHNG----DQSSCVVCMCDFELRQMLRVLPCSH 807
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 808 EFHAKCVDKWLRSNRTCPICR 828
>gi|296227840|ref|XP_002759543.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Callithrix jacchus]
Length = 381
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|119621880|gb|EAX01475.1| ring finger protein 165, isoform CRA_b [Homo sapiens]
Length = 260
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%), Gaps = 4/100 (4%)
Query: 240 SSVLGYNMNMGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLA 295
+L +G +GA + I R +YK+ D + ++ D +C ICL+
Sbjct: 154 EELLQLEDRLGNVTRGAVQNTIERFTFPHKYKKRRPQDGKGKKDEGEESDTDEKCTICLS 213
Query: 296 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
++ E+VR+LPC H+FH CVDQWL + CP+C+ ++E
Sbjct: 214 MLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKCPICRVDIE 253
>gi|326677584|ref|XP_001920673.3| PREDICTED: RING finger protein 165-like [Danio rerio]
Length = 310
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 198 FGSFQRAPNLHVL-----CISLLAWNALSYSFPFLLFLLLCCCVPLISS---------VL 243
+ + +P +H L ++ +Y +P L L L P S +L
Sbjct: 149 YQHYLASPRMHHLPRNTSTTQVVVHEIRNYPYPQLHLLALQSLSPSRHSSAVRESYEELL 208
Query: 244 GYNMNMGAADKGASDDQISRL--PSWRYKRVDSNLE-AGNSAPANEDPECCICLAKYKEK 300
+G+ +GA I R P KR +L+ N ++ D +C ICL+ ++
Sbjct: 209 QLEDRLGSVSRGAIQTTIERFTFPHKYKKRKPLDLKFCENDEESDVDEKCTICLSMLEDG 268
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 269 EDVRRLPCMHLFHQACVDQWLATSRKCPICRVDIQ 303
>gi|355746972|gb|EHH51586.1| hypothetical protein EGM_10995 [Macaca fascicularis]
Length = 381
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|6005864|ref|NP_009213.1| E3 ubiquitin-protein ligase RNF13 [Homo sapiens]
gi|34577087|ref|NP_899237.1| E3 ubiquitin-protein ligase RNF13 [Homo sapiens]
gi|197101023|ref|NP_001125196.1| E3 ubiquitin-protein ligase RNF13 precursor [Pongo abelii]
gi|114589798|ref|XP_530652.2| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 10 [Pan
troglodytes]
gi|114589802|ref|XP_001142115.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 9 [Pan
troglodytes]
gi|332214389|ref|XP_003256319.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Nomascus
leucogenys]
gi|332214391|ref|XP_003256320.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Nomascus
leucogenys]
gi|397512369|ref|XP_003826520.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Pan paniscus]
gi|426342508|ref|XP_004037884.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Gorilla
gorilla gorilla]
gi|426342510|ref|XP_004037885.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Gorilla
gorilla gorilla]
gi|21362880|sp|O43567.1|RNF13_HUMAN RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|75042231|sp|Q5RCV8.1|RNF13_PONAB RecName: Full=E3 ubiquitin-protein ligase RNF13; AltName: Full=RING
finger protein 13; Flags: Precursor
gi|2746333|gb|AAC03769.1| RING zinc finger protein [Homo sapiens]
gi|3387925|gb|AAC28641.1| RING zinc finger protein RZF [Homo sapiens]
gi|14602541|gb|AAH09781.1| Ring finger protein 13 [Homo sapiens]
gi|14602579|gb|AAH09803.1| Ring finger protein 13 [Homo sapiens]
gi|48145725|emb|CAG33085.1| RNF13 [Homo sapiens]
gi|55727286|emb|CAH90399.1| hypothetical protein [Pongo abelii]
gi|119599265|gb|EAW78859.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|119599267|gb|EAW78861.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|119599269|gb|EAW78863.1| ring finger protein 13, isoform CRA_b [Homo sapiens]
gi|167773739|gb|ABZ92304.1| ring finger protein 13 [synthetic construct]
gi|189053849|dbj|BAG36109.1| unnamed protein product [Homo sapiens]
gi|193786879|dbj|BAG52202.1| unnamed protein product [Homo sapiens]
gi|306921283|dbj|BAJ17721.1| ring finger protein 13 [synthetic construct]
gi|325463911|gb|ADZ15726.1| ring finger protein 13 [synthetic construct]
gi|410210576|gb|JAA02507.1| ring finger protein 13 [Pan troglodytes]
gi|410254348|gb|JAA15141.1| ring finger protein 13 [Pan troglodytes]
gi|410308004|gb|JAA32602.1| ring finger protein 13 [Pan troglodytes]
gi|410351773|gb|JAA42490.1| ring finger protein 13 [Pan troglodytes]
gi|410351775|gb|JAA42491.1| ring finger protein 13 [Pan troglodytes]
Length = 381
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|402861239|ref|XP_003895008.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 1 [Papio
anubis]
gi|402861241|ref|XP_003895009.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 isoform 2 [Papio
anubis]
gi|380783017|gb|AFE63384.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
gi|383410459|gb|AFH28443.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
gi|384941704|gb|AFI34457.1| E3 ubiquitin-protein ligase RNF13 [Macaca mulatta]
Length = 381
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|358418714|ref|XP_617227.4| PREDICTED: RING finger protein 165 [Bos taurus]
gi|359079406|ref|XP_002697858.2| PREDICTED: RING finger protein 165 [Bos taurus]
Length = 373
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 239 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 298
Query: 271 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 299 KRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 358
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 359 PICRVDIE 366
>gi|395859874|ref|XP_003802254.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Otolemur garnettii]
Length = 380
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 168 HVVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 227
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 228 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 275
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 276 TCPVCKQKV 284
>gi|148222567|ref|NP_001083709.1| ring finger protein 13 precursor [Xenopus laevis]
gi|39645071|gb|AAH63734.1| MGC68556 protein [Xenopus laevis]
Length = 381
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 222 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPSWRYKRVDSNLEAGN 280
Y PFL+ + +C + +I + + + A + DQ+ +LP ++K+ D
Sbjct: 183 YLIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKKGD------- 235
Query: 281 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQEL 334
E C +CL +Y+E +++R LPCSH +H KCVD WL + CP+CKQ++
Sbjct: 236 -----EYDVCAVCLDEYEEGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 285
>gi|327281659|ref|XP_003225564.1| PREDICTED: hypothetical protein LOC100554767 [Anolis carolinensis]
Length = 650
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/79 (37%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G + DQI LP+ Y V ++E G ++ A C +C+ +Y ++R+LPC H FH
Sbjct: 575 RGLTKDQIDSLPTRNYGSV--SVEEGETSKA-----CSVCIIEYVVGNKLRQLPCMHEFH 627
Query: 314 LKCVDQWLRILSCCPLCKQ 332
C+D+WL S CP+C+Q
Sbjct: 628 FHCIDRWLSDNSTCPICRQ 646
>gi|449271045|gb|EMC81660.1| RING finger protein 13 [Columba livia]
Length = 390
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/129 (30%), Positives = 70/129 (54%), Gaps = 5/129 (3%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG-ASDDQISRLPS 266
HV+ I + Y PFL+ + +C + +I + + + A K DQ+ ++P
Sbjct: 169 HVVLIPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARKNRLRKDQLKKIPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ + + + +E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGEWIILCLSR---DEYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 285
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 286 TCPVCKQKV 294
>gi|221110595|ref|XP_002160653.1| PREDICTED: E3 ubiquitin-protein ligase Praja-1-like, partial [Hydra
magnipapillata]
Length = 359
Score = 68.6 bits (166), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 51/82 (62%), Gaps = 9/82 (10%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G S ++ +PS+R+ G + N +C +C+++Y +E++R+LPC+H FH
Sbjct: 281 RGLSKTELDTIPSFRFS-------TGTAKETNS--KCVVCMSEYVNREKLRRLPCTHDFH 331
Query: 314 LKCVDQWLRILSCCPLCKQELE 335
KC+D+WLR CP+C+ +++
Sbjct: 332 SKCIDKWLRSNRTCPVCRDDVK 353
>gi|242062904|ref|XP_002452741.1| hypothetical protein SORBIDRAFT_04g031560 [Sorghum bicolor]
gi|241932572|gb|EES05717.1| hypothetical protein SORBIDRAFT_04g031560 [Sorghum bicolor]
Length = 194
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 3/85 (3%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
AA+KG + + LP+ Y V + +AG+ EC ICLA+++E + +R LP C
Sbjct: 68 AANKGVKKEVLRSLPTVTY--VSDSCKAGDEEEGGGADECAICLAEFEEGQAMRVLPQCG 125
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
H FH CVD WLR S CP C++ L
Sbjct: 126 HAFHAACVDTWLRAHSSCPSCRRVL 150
>gi|195446140|ref|XP_002070646.1| GK10924 [Drosophila willistoni]
gi|194166731|gb|EDW81632.1| GK10924 [Drosophila willistoni]
Length = 1411
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 63/113 (55%), Gaps = 15/113 (13%)
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAA--DKGASDDQISR--LPSWRYKRVDSNLEAGNSAP 283
L L + PL LG + +G ++GA+ + I R LP +Y+RV E
Sbjct: 1281 LHLEIGLATPL---SLGSRILIGPPRPNRGATLETIERNTLP-HKYRRVRRPSET----- 1331
Query: 284 ANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+ED E C ICL+ ++ + +VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1332 -DEDAEKCAICLSLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE 1383
>gi|403265778|ref|XP_003925091.1| PREDICTED: E3 ubiquitin-protein ligase RNF13 [Saimiri boliviensis
boliviensis]
Length = 381
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|358337342|dbj|GAA55711.1| E3 ubiquitin-protein ligase RNF12-B [Clonorchis sinensis]
Length = 483
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 33/51 (64%)
Query: 281 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
S P+ PEC ICL +Y+ K+++R LPC H FH KC+D W S CP C+
Sbjct: 245 STPSRGHPECEICLTEYRNKDQLRHLPCGHAFHKKCIDAWFNESSTCPKCR 295
>gi|345326230|ref|XP_001507758.2| PREDICTED: E3 ubiquitin-protein ligase RNF13-like [Ornithorhynchus
anatinus]
Length = 462
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 248 HIVLVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPI 307
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 308 HKFKKGD------------EYDICAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 355
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 356 TCPVCKQKV 364
>gi|297805668|ref|XP_002870718.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297316554|gb|EFH46977.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 375
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 1/83 (1%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
D G I LP + YK + + G + A E +C +CL ++ EK+++R LP CSH
Sbjct: 105 DSGLDQAFIDALPVFHYKEIVGSGSVGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSHA 164
Query: 312 FHLKCVDQWLRILSCCPLCKQEL 334
FHL C+D WL+ S CPLC+ L
Sbjct: 165 FHLNCIDTWLQSNSTCPLCRGTL 187
>gi|393909281|gb|EFO18865.2| ring finger-H2 protein [Loa loa]
Length = 505
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
GA+ +QI+R S YK + N P NE C +CL ++ EEVR L CSH+FH+
Sbjct: 421 GATVEQINRF-STTYKYIKEN-----DIPENEQERCTVCLNDFEMDEEVRALRCSHVFHI 474
Query: 315 KCVDQWLRILSCCPLCKQELER 336
C+D+WL CP+C+ ++++
Sbjct: 475 VCIDRWLVYNKKCPVCRLDVDK 496
>gi|296473789|tpg|DAA15904.1| TPA: ring finger protein 165-like [Bos taurus]
Length = 571
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 437 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 496
Query: 271 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 497 KRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 556
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 557 PICRVDIE 564
>gi|297797783|ref|XP_002866776.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297312611|gb|EFH43035.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 221
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 47/85 (55%), Gaps = 12/85 (14%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A KG + D + R+P R +++P E C +CL ++ E VR LP C
Sbjct: 148 AISKGLTGDSLDRIPKVRIT---------DTSP--EIVSCSVCLQDFQVGETVRSLPQCH 196
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
HMFHL C+D+WLR + CPLC++ L
Sbjct: 197 HMFHLPCIDKWLRAHASCPLCRRHL 221
>gi|47207180|emb|CAF92164.1| unnamed protein product [Tetraodon nigroviridis]
Length = 306
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 222 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGA-SDDQISRLPSWRYKRVDSNLEAGN 280
Y PFL+ + +C + ++ + + + A + DQ+ +LP +YK+ DS
Sbjct: 117 YLIPFLIIVGICLILIVVFMITKFVQDRRRARRSRLHKDQLKKLPIHKYKKGDSY----- 171
Query: 281 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQEL 334
C ICL +Y++ +++R LPCSH +H KCVD WL + CP+CKQ++
Sbjct: 172 -------DVCAICLDEYEDGDKLRVLPCSHAYHSKCVDPWLTKTKKTCPVCKQKV 219
>gi|297811169|ref|XP_002873468.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319305|gb|EFH49727.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 526
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 242 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKE 299
+L MG S++ +SR L Y++ D E G+ + + ED +C IC ++ +
Sbjct: 432 LLALGEKMGTVSTALSEEALSRSLKQSTYQKTD---ETGSISLSKEDDIKCSICQEEFVD 488
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+EV +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 489 GDEVGTMPCQHMYHVSCVQQWLRMKNWCPICKTSAE 524
>gi|357478447|ref|XP_003609509.1| RING finger protein [Medicago truncatula]
gi|355510564|gb|AES91706.1| RING finger protein [Medicago truncatula]
Length = 545
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 47/75 (62%), Gaps = 7/75 (9%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+ P +K+VD+ + GN A +C ICLA+Y++ +++R LPC H +H+ CVD+W
Sbjct: 461 VDSFPLKSHKKVDA-ADGGNDAE-----QCYICLAEYEDGDQIRVLPCKHEYHMSCVDKW 514
Query: 321 LR-ILSCCPLCKQEL 334
L+ I CPLC+ +
Sbjct: 515 LKEIHGVCPLCRSNV 529
>gi|307203731|gb|EFN82691.1| RING finger protein 165 [Harpegnathos saltator]
Length = 695
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 255 GASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
GA+ + I S +YKRV +E G+ A +C ICL+++++ E VR+LPC H+FH
Sbjct: 608 GATQESIESHTFPHKYKRV-KKVENGDDATE----KCTICLSEFEDCENVRRLPCMHLFH 662
Query: 314 LKCVDQWLRILSCCPLCKQELE 335
+ CVDQWL CP+C+ ++E
Sbjct: 663 IDCVDQWLCTNKRCPICRVDIE 684
>gi|390179083|ref|XP_003736797.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859705|gb|EIM52870.1| GA26288, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 1224
Score = 68.2 bits (165), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS++Y N E N + C +C+ ++ K+ +R LPCSH
Sbjct: 1099 AKPRGLTRNEIDQLPSYKY-----NPEVHNG----DQTSCVVCMCDFELKQLLRVLPCSH 1149
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 1150 EFHAKCVDKWLRSNRTCPICR 1170
>gi|356548563|ref|XP_003542670.1| PREDICTED: uncharacterized protein LOC100783722 [Glycine max]
Length = 540
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 45/72 (62%), Gaps = 7/72 (9%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+ LP +K+VD + GN A +C ICLA Y+E +++R LPC H +H+ CVD+W
Sbjct: 456 VDSLPLKSHKKVD-GADVGNDAE-----QCYICLADYEEGDQIRVLPCFHEYHMSCVDKW 509
Query: 321 LR-ILSCCPLCK 331
L+ I CPLC+
Sbjct: 510 LKEIHGVCPLCR 521
>gi|426254067|ref|XP_004020707.1| PREDICTED: RING finger protein 165 [Ovis aries]
Length = 370
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 63/128 (49%), Gaps = 13/128 (10%)
Query: 221 SYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQISRLP-SWRYK 270
+Y +P L FL L P +L +G +GA + I R +YK
Sbjct: 236 NYPYPQLHFLALQGLNPSRHTSAVRESYEELLQLEDRLGNVTRGAVQNTIERFTFPHKYK 295
Query: 271 R---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCC 327
+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVDQWL + C
Sbjct: 296 KRRPQDGKGKKEEGEESDTDEKCTICLSLLEDGEDVRRLPCMHLFHQLCVDQWLAMSKKC 355
Query: 328 PLCKQELE 335
P+C+ ++E
Sbjct: 356 PICRVDIE 363
>gi|312086763|ref|XP_003145205.1| ring finger-H2 protein [Loa loa]
Length = 484
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
GA+ +QI+R S YK + N P NE C +CL ++ EEVR L CSH+FH+
Sbjct: 400 GATVEQINRF-STTYKYIKEN-----DIPENEQERCTVCLNDFEMDEEVRALRCSHVFHI 453
Query: 315 KCVDQWLRILSCCPLCKQELER 336
C+D+WL CP+C+ ++++
Sbjct: 454 VCIDRWLVYNKKCPVCRLDVDK 475
>gi|195655383|gb|ACG47159.1| protein binding protein [Zea mays]
Length = 271
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
++G +G SD+ IS L W+YK V + +G + +C ICL+ ++ +E + LP
Sbjct: 184 SVGTEYRGLSDELISYLQPWKYKAVKA---SGLFSRKTNHEDCPICLSTFRNRETMITLP 240
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL++ CP+CK EL
Sbjct: 241 CRHHYHAACVTRWLKVNKTCPVCKYEL 267
>gi|413942672|gb|AFW75321.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 318
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
++G +G SD+ IS L W+YK V + +G + +C ICL+ ++ +E + LP
Sbjct: 231 SVGTEYRGLSDELISYLQPWKYKAVKA---SGLFSRKTNHEDCPICLSTFRNRETMITLP 287
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL++ CP+CK EL
Sbjct: 288 CRHHYHAACVTRWLKVNKTCPVCKYEL 314
>gi|194901950|ref|XP_001980514.1| GG17197 [Drosophila erecta]
gi|190652217|gb|EDV49472.1| GG17197 [Drosophila erecta]
Length = 1251
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+RV E+ +ED E C ICL ++ + EVR+LPC
Sbjct: 1149 NRGATLETIERNTLP-HKYRRVRRPSES------DEDAEKCAICLTLFEIENEVRRLPCM 1201
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1202 HLFHTDCVDQWLVTNKHCPICRVDIE 1227
>gi|56118680|ref|NP_001008015.1| ring finger protein 13 precursor [Xenopus (Silurana) tropicalis]
gi|51704075|gb|AAH80893.1| ring finger protein 13 [Xenopus (Silurana) tropicalis]
Length = 383
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 222 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPSWRYKRVDSNLEAGN 280
Y PFL+ + +C + +I + + + A + DQ+ +LP ++K+ D
Sbjct: 184 YLIPFLIIVGICLVLIVIFMITKFVQDRHRARRNRLRKDQLKKLPIHKFKKGD------- 236
Query: 281 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQEL 334
E C +CL +Y+E +++R LPCSH +H KCVD WL + CP+CKQ++
Sbjct: 237 -----EYDVCAVCLDEYEEGDKLRILPCSHAYHCKCVDPWLTKTKKTCPVCKQKV 286
>gi|53792039|dbj|BAD54624.1| hypothetical protein [Oryza sativa Japonica Group]
gi|53793096|dbj|BAD54305.1| hypothetical protein [Oryza sativa Japonica Group]
gi|125555625|gb|EAZ01231.1| hypothetical protein OsI_23259 [Oryza sativa Indica Group]
Length = 190
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 67/141 (47%), Gaps = 10/141 (7%)
Query: 205 PNLHVLCISLLAWNALSYSFPFLLFLLLCCC--------VPLISSVLGYNMNMGAADKGA 256
P ++ +S + + +F L+ L CCC V G + + A + G
Sbjct: 25 PPRGLIVVSAVFLSIFLATFLTLMSLAFCCCRRWRERDAVSGYVDGEGAVVVVAAGESGG 84
Query: 257 SDD-QISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHL 314
+ + LP V S+ + G +A + EC +CL +E E VR+LP C H++H
Sbjct: 85 GEPFPVEALPPAYAYVVGSSDDGGATAASGVGRECAVCLGAVREGEMVRRLPACEHVYHA 144
Query: 315 KCVDQWLRILSCCPLCKQELE 335
C+D+WL CPLC++EL+
Sbjct: 145 DCIDRWLAAHRTCPLCRRELD 165
>gi|115440011|ref|NP_001044285.1| Os01g0755700 [Oryza sativa Japonica Group]
gi|20160754|dbj|BAB89695.1| RING zinc finger protein-like [Oryza sativa Japonica Group]
gi|113533816|dbj|BAF06199.1| Os01g0755700 [Oryza sativa Japonica Group]
gi|215766318|dbj|BAG98546.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 238
Score = 67.8 bits (164), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 246 NMNMGAADK--GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 303
+N GA K G I+ LP+ Y +V AG + EC ICL +E + V
Sbjct: 77 TVNAGAPPKQVGLDPSAIAALPTAAYGKVAGGDAAGGTT------ECAICLGAMQEADAV 130
Query: 304 RKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
R LP C H+FH+ C+D+WL S CP+C+ +E
Sbjct: 131 RVLPACRHVFHVACIDKWLASSSSCPVCRAGVE 163
>gi|213512162|ref|NP_001135282.1| ring finger protein 13 [Salmo salar]
gi|209155986|gb|ACI34225.1| RING finger protein 13 [Salmo salar]
Length = 380
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 66/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
HV+ + + Y PFL+ + +C + ++ + + + A + DQ+ +LP
Sbjct: 169 HVVLMPDFSLPLEYYLIPFLITVGICLILIVVFMITKFVQDRHRARRSRLRKDQLKKLPI 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
+YK+ D C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKYKKGDVY------------DVCAICLDEYEDGDQLRVLPCSHAYHSKCVDPWLTKTKK 276
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 277 TCPVCKQKV 285
>gi|145505561|ref|XP_001438747.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405919|emb|CAK71350.1| unnamed protein product [Paramecium tetraurelia]
Length = 361
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 66/137 (48%), Gaps = 28/137 (20%)
Query: 199 GSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASD 258
G Q+ N H + +A++Y +L +G KG +
Sbjct: 219 GDQQQLENFHEYQDQEIDPDAMTYE-----------------QLLELEEQIGNVPKGLTK 261
Query: 259 DQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
QI +LP KR ++ +S P ++ C +CL ++KE+E+VR+LPC H++H C+
Sbjct: 262 QQIKQLP----KRTLNH----DSMPEDK---CSVCLFEFKEEEKVRELPCKHIYHSSCIK 310
Query: 319 QWLRILSCCPLCKQELE 335
WL+ CPLCK E+E
Sbjct: 311 NWLQNNKQCPLCKTEIE 327
>gi|145519746|ref|XP_001445734.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413200|emb|CAK78337.1| unnamed protein product [Paramecium tetraurelia]
Length = 470
Score = 67.8 bits (164), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 9/100 (9%)
Query: 238 LISSVLGYNMNMGAADK-GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLA 295
L+++ + N N G D +I +LP R NLE +ED +C ICL
Sbjct: 377 LLNTFIQLNENGTVEGHLGCEDHEIQQLPVRRI-----NLEQ--IKQLDEDHMKCLICLC 429
Query: 296 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+Y+E+++V+ +PC H FH +C+D+WL+ CP+CK ELE
Sbjct: 430 EYEEEDQVKTIPCLHYFHDECIDKWLKKSRHCPICKNELE 469
>gi|79332615|ref|NP_001032158.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
gi|332010773|gb|AED98156.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
Length = 245
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A KG + D ++R+P R +++P E C +CL ++ E VR LP C
Sbjct: 172 AISKGLTGDSLNRIPKVRIT---------DTSP--EIVSCSVCLQDFQVGETVRSLPHCH 220
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
HMFHL C+D+WLR + CPLC++ L
Sbjct: 221 HMFHLPCIDKWLRRHASCPLCRRHL 245
>gi|195501805|ref|XP_002097951.1| GE10089 [Drosophila yakuba]
gi|194184052|gb|EDW97663.1| GE10089 [Drosophila yakuba]
Length = 1259
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+RV E+ +ED E C ICL ++ + EVR+LPC
Sbjct: 1157 NRGATLETIERNTLP-HKYRRVRRPSES------DEDAEKCAICLTLFEIENEVRRLPCM 1209
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1210 HLFHTDCVDQWLVTNKHCPICRVDIE 1235
>gi|195395466|ref|XP_002056357.1| GJ10273 [Drosophila virilis]
gi|194143066|gb|EDW59469.1| GJ10273 [Drosophila virilis]
Length = 1174
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 49/81 (60%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + +++ +LPS++Y N EA N + C +C+ ++ ++ +R LPCSH
Sbjct: 1042 AKPRGLTRNEVDQLPSYKY-----NPEAHNG----DQSSCVVCMCDFELRQLLRVLPCSH 1092
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 1093 EFHAKCVDKWLRSNRTCPICR 1113
>gi|15239242|ref|NP_201408.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
gi|68565289|sp|Q9FKX5.1|NIPL1_ARATH RecName: Full=NEP1-interacting protein-like 1; AltName:
Full=RING-H2 finger protein ATL27
gi|10177122|dbj|BAB10412.1| unnamed protein product [Arabidopsis thaliana]
gi|46518387|gb|AAS99675.1| At5g66070 [Arabidopsis thaliana]
gi|48958511|gb|AAT47808.1| At5g66070 [Arabidopsis thaliana]
gi|332010772|gb|AED98155.1| NEP1-interacting protein-like 1 [Arabidopsis thaliana]
Length = 221
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A KG + D ++R+P R +++P E C +CL ++ E VR LP C
Sbjct: 148 AISKGLTGDSLNRIPKVRIT---------DTSP--EIVSCSVCLQDFQVGETVRSLPHCH 196
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
HMFHL C+D+WLR + CPLC++ L
Sbjct: 197 HMFHLPCIDKWLRRHASCPLCRRHL 221
>gi|115449737|ref|NP_001048540.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|48716363|dbj|BAD22974.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|48716498|dbj|BAD23103.1| zinc finger (C3HC4-type RING finger)-like [Oryza sativa Japonica
Group]
gi|113538071|dbj|BAF10454.1| Os02g0820200 [Oryza sativa Japonica Group]
gi|222623928|gb|EEE58060.1| hypothetical protein OsJ_08900 [Oryza sativa Japonica Group]
Length = 320
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A +G + I LP++RY++ + A +S EC +C+++++E+E VR LP C
Sbjct: 110 AEPRGLEEAAIQSLPAFRYRKAIKDTTADSS-------ECAVCISEFQEEERVRLLPSCL 162
Query: 310 HMFHLKCVDQWLRILSCCPLCK 331
H+FH+ C+D WL+ + CPLC+
Sbjct: 163 HVFHVDCIDTWLQGNANCPLCR 184
>gi|119599264|gb|EAW78858.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|119599266|gb|EAW78860.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|119599268|gb|EAW78862.1| ring finger protein 13, isoform CRA_a [Homo sapiens]
gi|193786901|dbj|BAG52224.1| unnamed protein product [Homo sapiens]
Length = 262
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 50 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 109
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 110 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 157
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 158 TCPVCKQKV 166
>gi|84994748|ref|XP_952096.1| hypothetical protein [Theileria annulata strain Ankara]
gi|65302257|emb|CAI74364.1| hypothetical protein, conserved [Theileria annulata]
Length = 296
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 40/58 (68%), Gaps = 1/58 (1%)
Query: 275 NLEAGNSAPANED-PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
NL G+S +E C +CL +Y++ +E+R+LPC+H FH +C+D WL+ + CP+CK
Sbjct: 230 NLFTGDSGELDESLRSCSVCLEEYQQGDEIRRLPCTHSFHKRCIDTWLKKSTICPICK 287
>gi|388495990|gb|AFK36061.1| unknown [Lotus japonicus]
Length = 237
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
Query: 245 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 304
++ G A KG S D + ++P + D+N +A + E C +CL ++ E VR
Sbjct: 154 FDTGCGGA-KGLSGDSVEKIPKIKIT-TDNNADA-----SGERVSCSVCLQDFQLGETVR 206
Query: 305 KLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
LP C HMFHL C+D+WL CPLC+++L
Sbjct: 207 SLPHCHHMFHLPCIDKWLFRHGSCPLCRRDL 237
>gi|383856916|ref|XP_003703952.1| PREDICTED: uncharacterized protein LOC100880939 [Megachile
rotundata]
Length = 625
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 52/82 (63%), Gaps = 6/82 (7%)
Query: 255 GASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
GA+ + I S ++YKRV +E G A +C ICL+++++ E VR+LPC H+FH
Sbjct: 538 GATQESIESHTFRYKYKRV-KKVENGEDAIE----KCTICLSEFEDCESVRRLPCMHLFH 592
Query: 314 LKCVDQWLRILSCCPLCKQELE 335
+ CVDQWL CP+C+ ++E
Sbjct: 593 IDCVDQWLCTNKRCPICRVDIE 614
>gi|198454408|ref|XP_002137865.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198132780|gb|EDY68423.1| GA26288, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 890
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS++Y N E N + C +C+ ++ K+ +R LPCSH
Sbjct: 765 AKPRGLTRNEIDQLPSYKY-----NPEVHNG----DQTSCVVCMCDFELKQLLRVLPCSH 815
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 816 EFHAKCVDKWLRSNRTCPICR 836
>gi|242058313|ref|XP_002458302.1| hypothetical protein SORBIDRAFT_03g030870 [Sorghum bicolor]
gi|241930277|gb|EES03422.1| hypothetical protein SORBIDRAFT_03g030870 [Sorghum bicolor]
Length = 475
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 47/81 (58%), Gaps = 11/81 (13%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+GASDDQI+ LP S +E GN + D C ICL + +R LPC H FH
Sbjct: 403 RGASDDQINSLPL-------SLVEGGNCS----DEPCNICLDCPAAGDSIRHLPCLHKFH 451
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
KC+D+WL + +CCP+CK +
Sbjct: 452 KKCIDRWLGMRTCCPICKSNV 472
>gi|345305717|ref|XP_003428368.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 165-like
[Ornithorhynchus anatinus]
Length = 357
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/100 (32%), Positives = 55/100 (55%), Gaps = 4/100 (4%)
Query: 240 SSVLGYNMNMGAADKGASDDQISRLP-SWRYKR---VDSNLEAGNSAPANEDPECCICLA 295
+L +G+ +GA + I R +YK+ + + + ++ D +C ICL+
Sbjct: 251 EELLQLEDRLGSVSRGAVQNTIERFTFPHKYKKRRPQEGKDKKEDGEESDTDEKCTICLS 310
Query: 296 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
++ E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 311 MLEDGEDVRRLPCMHLFHQVCVDQWLATSKKCPICRVDIE 350
>gi|218191836|gb|EEC74263.1| hypothetical protein OsI_09477 [Oryza sativa Indica Group]
Length = 320
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 51/82 (62%), Gaps = 8/82 (9%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A +G + I LP++RY++ + A +S EC +C+++++E+E VR LP C
Sbjct: 110 AEPRGLEEAAIQSLPAFRYRKAIKDTTADSS-------ECAVCISEFQEEERVRLLPSCL 162
Query: 310 HMFHLKCVDQWLRILSCCPLCK 331
H+FH+ C+D WL+ + CPLC+
Sbjct: 163 HVFHVDCIDTWLQGNANCPLCR 184
>gi|29367395|gb|AAO72570.1| putative ATP synthetase alpha chain [Oryza sativa Japonica Group]
Length = 198
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 69/131 (52%), Gaps = 7/131 (5%)
Query: 35 NRPAARAGAPSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPFNSSTWMTLELLA 94
+R A RA P+ +A+ A + RR +Y RS P NS W+++E+L
Sbjct: 42 DRSATRALVPALQAPSAVGAPSAGHTSGARRSDNYVRRHRS-----PLNSGLWISIEVLV 96
Query: 95 LLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLP 154
+ QI LS+S+KE P P+ W++GY +GC +L LY RY ++ + V+G + P
Sbjct: 97 NVSQIVAAIVVLSLSRKEHPQAPLFEWVIGYTVGCFATLPHLYWRY--IHRNIVNGENEP 154
Query: 155 DVEQQRSSEDS 165
Q SS+++
Sbjct: 155 AHTLQGSSQNN 165
>gi|357143190|ref|XP_003572834.1| PREDICTED: RING-H2 finger protein ATL80-like [Brachypodium
distachyon]
Length = 193
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 1/109 (0%)
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 286
L + C C + G + + A+KG + + LP+ Y +A +S E
Sbjct: 40 LGLVARCACTRRWARAAGASSSPPGANKGVKKEVLRSLPTVTYVSDGRGGKADSSESEAE 99
Query: 287 DPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
EC ICLA++++ +E+R LP C H FH CVD WLR S CP C++ L
Sbjct: 100 ADECAICLAEFEDGQEMRVLPQCGHGFHAACVDTWLRSHSSCPSCRRVL 148
>gi|255565501|ref|XP_002523741.1| zinc finger protein, putative [Ricinus communis]
gi|223537045|gb|EEF38681.1| zinc finger protein, putative [Ricinus communis]
Length = 254
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 48/84 (57%), Gaps = 11/84 (13%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP- 307
+G + KG + I LP + Y ++ + EC +CL +++EKE V+ +P
Sbjct: 101 VGGSRKGLDPEVIKSLPVYSYYHGEAKYQI----------ECAVCLGEFEEKETVKSIPY 150
Query: 308 CSHMFHLKCVDQWLRILSCCPLCK 331
C HMFHL+C++ WL++ CP+C+
Sbjct: 151 CKHMFHLECIETWLKLHVTCPVCR 174
>gi|307170860|gb|EFN62971.1| RING finger protein 165 [Camponotus floridanus]
Length = 709
Score = 67.4 bits (163), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 54/88 (61%), Gaps = 6/88 (6%)
Query: 249 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
MG + GA+ + I S +YKRV +E G A +C ICL+++++ E VR+LP
Sbjct: 616 MGHINCGATQESIESHTFPHKYKRV-KKVENGEDAIE----KCTICLSEFEDCESVRRLP 670
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQELE 335
C H+FH+ CVD+WL CP+C+ ++E
Sbjct: 671 CMHLFHIDCVDRWLCTNKRCPICRVDIE 698
>gi|226505342|ref|NP_001148879.1| protein binding protein [Zea mays]
gi|195622886|gb|ACG33273.1| protein binding protein [Zea mays]
Length = 268
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
++G +G SD+ IS L SW+YK +G + +C ICL+ ++ +E + LP
Sbjct: 184 SVGTEYRGLSDELISYLQSWKYK------SSGLFSRKTNHEDCPICLSTFRNRETMITLP 237
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL++ CP+CK EL
Sbjct: 238 CRHHYHAACVTRWLKVNKTCPVCKYEL 264
>gi|406862594|gb|EKD15644.1| RING finger domain protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 365
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 37/61 (60%), Gaps = 8/61 (13%)
Query: 283 PANEDPE-------CCICLAKYKEKEEVRKLPCSHMFHLKCVDQW-LRILSCCPLCKQEL 334
P E+PE C IC+A + E EEVR LPCSH FH CVD W L + CP+C+ EL
Sbjct: 169 PVKEEPEQRQPGFECAICIADFVENEEVRLLPCSHTFHPACVDPWLLNVSGTCPICRYEL 228
Query: 335 E 335
E
Sbjct: 229 E 229
>gi|297286655|ref|XP_001108379.2| PREDICTED: RING finger protein 13 [Macaca mulatta]
Length = 246
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 67/129 (51%), Gaps = 14/129 (10%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 34 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 93
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 94 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 141
Query: 326 CCPLCKQEL 334
CP+CKQ++
Sbjct: 142 TCPVCKQKV 150
>gi|325180789|emb|CCA15199.1| conserved hypothetical protein [Albugo laibachii Nc14]
Length = 522
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 57/105 (54%), Gaps = 19/105 (18%)
Query: 250 GAADKGASDDQISRLPSWRYKR---------VDSNLEAGNSAPA---------NEDPECC 291
G+ +G S +++ +L +YK+ V N + S+ N D + C
Sbjct: 348 GSNTRGVSQERMQQLEILKYKKPVKSVDPACVHHNKDVSVSSHVGSIQIPICLNFDEDVC 407
Query: 292 -ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
ICL +++E+E VRKL C+H+FH+ C+D+WLR CP+CK +E
Sbjct: 408 PICLVEFEEEENVRKLNCTHIFHVPCIDEWLRRNVTCPMCKDIVE 452
>gi|194744417|ref|XP_001954691.1| GF16619 [Drosophila ananassae]
gi|190627728|gb|EDV43252.1| GF16619 [Drosophila ananassae]
Length = 1226
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 62/113 (54%), Gaps = 15/113 (13%)
Query: 228 LFLLLCCCVPLISSVLGYNMNMGAA--DKGASDDQISR--LPSWRYKRVDSNLEAGNSAP 283
L L + PL LG + +G ++GA+ + I R LP +Y+RV E
Sbjct: 1100 LHLEIGLATPL---SLGSRILIGPPRPNRGATLETIERNTLP-HKYRRVRRPSET----- 1150
Query: 284 ANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+ED E C ICL ++ + +VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1151 -DEDAEKCAICLTLFEIENDVRRLPCMHLFHTDCVDQWLVTNKHCPICRVDIE 1202
>gi|356562902|ref|XP_003549707.1| PREDICTED: uncharacterized protein LOC100783604 [Glycine max]
Length = 541
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/72 (43%), Positives = 44/72 (61%), Gaps = 7/72 (9%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+ LP +K+VD GN A +C ICLA Y+E +++R LPC H +H+ CVD+W
Sbjct: 457 VDSLPLKSHKKVDV-AHGGNDAE-----QCYICLADYEEGDQIRVLPCFHEYHMSCVDKW 510
Query: 321 LR-ILSCCPLCK 331
L+ I CPLC+
Sbjct: 511 LKEIHGVCPLCR 522
>gi|38567912|emb|CAD41576.3| OSJNBa0088I22.8 [Oryza sativa Japonica Group]
gi|125591338|gb|EAZ31688.1| hypothetical protein OsJ_15836 [Oryza sativa Japonica Group]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 249 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 215 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 266
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL+I CP+C +E+
Sbjct: 267 CEHQYHQTCVTKWLKINKVCPVCNKEV 293
>gi|225463026|ref|XP_002266433.1| PREDICTED: uncharacterized protein LOC100263653 [Vitis vinifera]
Length = 542
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 275 NLEAGNSAPANED-PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQ 332
N + ++A + ED +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+
Sbjct: 464 NHKKADTAQSGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRG 523
Query: 333 EL 334
++
Sbjct: 524 DV 525
>gi|219127302|ref|XP_002183877.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404600|gb|EEC44546.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 317
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 11/101 (10%)
Query: 240 SSVLGYNMNMGAA------DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANED--PECC 291
+++L +N G A G S +I RLP +R+ ++ P +E+ P C
Sbjct: 216 AALLRFNEESGPALESLLNHVGLSQQEIDRLP---LRRLSDPMDEVLRRPMSEEDLPLCT 272
Query: 292 ICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
ICL Y+ ++EVR +PC H FH C+D WLR + CP+CK
Sbjct: 273 ICLEPYRLEDEVRSIPCFHYFHKSCIDPWLRQKASCPICKH 313
>gi|125549397|gb|EAY95219.1| hypothetical protein OsI_17037 [Oryza sativa Indica Group]
Length = 298
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 249 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 215 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 266
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL+I CP+C +E+
Sbjct: 267 CEHQYHQTCVTKWLKINKVCPVCNKEV 293
>gi|147858550|emb|CAN78871.1| hypothetical protein VITISV_024970 [Vitis vinifera]
Length = 542
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 275 NLEAGNSAPANED-PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQ 332
N + ++A + ED +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+
Sbjct: 464 NHKKADTAQSGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRG 523
Query: 333 EL 334
++
Sbjct: 524 DV 525
>gi|198434521|ref|XP_002131882.1| PREDICTED: similar to Ring finger protein 44 [Ciona intestinalis]
Length = 765
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 75/156 (48%), Gaps = 34/156 (21%)
Query: 203 RAPNLHVLCISLLAWNA----------LSYSFPFL---LFLLLCCCVPLIS--------- 240
AP+LH I + WN L++ P L +F PL++
Sbjct: 596 HAPSLHSHPIVMSPWNVPQVIPPLPQFLAFPLPTLPGFMFNPFMTFRPLLALDEDVDPTN 655
Query: 241 --SVLGYNMNMGAAD-KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKY 297
+++ +G +G S +I +L S+R+K G S+P + P C +C++++
Sbjct: 656 YEALINLAERLGEVKPQGLSKPRIDQLTSYRFK-------PGLSSP--DQPICVVCMSEW 706
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 333
+ K+ +R LPC H FH KCVD+WLR CP+C+ +
Sbjct: 707 EPKQLLRVLPCKHEFHAKCVDRWLRSNRTCPICRGD 742
>gi|405967974|gb|EKC33083.1| Protein regulator of cytokinesis 1 [Crassostrea gigas]
Length = 1813
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 49/81 (60%), Gaps = 7/81 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A KG + +I +LP++R+ + + + + ++ C +C+ ++ ++ +R LPCSH
Sbjct: 1729 AKPKGLTKPEIEQLPAYRFNKENHHSDMDQTS-------CVVCMCDFENRQLLRVLPCSH 1781
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WL+ CP+C+
Sbjct: 1782 EFHAKCVDKWLKTNRTCPICR 1802
>gi|326498937|dbj|BAK02454.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 313
G +S LP Y++ E+G + A EC +CLA+ + +E R+LP C H+FH
Sbjct: 84 GLDASALSALPVTAYRK-----ESGAAPRA----ECAVCLAELADGDEARELPNCGHLFH 134
Query: 314 LKCVDQWLRILSCCPLCKQELE 335
L+CVD WLR + CPLC+ E
Sbjct: 135 LECVDAWLRTRTTCPLCRAGAE 156
>gi|195444736|ref|XP_002070005.1| GK11818 [Drosophila willistoni]
gi|194166090|gb|EDW80991.1| GK11818 [Drosophila willistoni]
Length = 846
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G S ++I +LPS++Y N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 721 AKPRGLSRNEIDQLPSYKY-----NPEVHNG----DQTSCVVCMCDFELRQLLRVLPCSH 771
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 772 EFHAKCVDKWLRSNRTCPICR 792
>gi|326488711|dbj|BAJ97967.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 211
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 47/82 (57%), Gaps = 10/82 (12%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 313
G +S LP Y++ E+G + A EC +CLA+ + +E R+LP C H+FH
Sbjct: 84 GLDASALSALPVTAYRK-----ESGAAPRA----ECAVCLAELADGDEARELPNCGHLFH 134
Query: 314 LKCVDQWLRILSCCPLCKQELE 335
L+CVD WLR + CPLC+ E
Sbjct: 135 LECVDAWLRTRTTCPLCRAGAE 156
>gi|195606966|gb|ACG25313.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 512
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 11/77 (14%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
++ LP YK+++ AP D +C ICL +Y++ +++R LPC H FHL+CVD
Sbjct: 443 VNSLPCKSYKKLE--------APQRSDDMEQCHICLNEYEDGDQIRTLPCKHEFHLQCVD 494
Query: 319 QWLR-ILSCCPLCKQEL 334
+WL+ I CPLC+ ++
Sbjct: 495 KWLKEIHRVCPLCRGDV 511
>gi|357625903|gb|EHJ76189.1| eIF2B-beta protein [Danaus plexippus]
Length = 1060
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 27/81 (33%), Positives = 44/81 (54%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + +I LPS++Y E C +C+ +++ ++ +R LPC+H
Sbjct: 978 AKPRGLARHEIDLLPSYKYSE---------QTHQGEQTSCVVCMCEFEARQTLRVLPCAH 1028
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 1029 EFHAKCVDKWLRSNRTCPICR 1049
>gi|401412029|ref|XP_003885462.1| Proteophosphoglycan ppg4, related [Neospora caninum Liverpool]
gi|325119881|emb|CBZ55434.1| Proteophosphoglycan ppg4, related [Neospora caninum Liverpool]
Length = 1822
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/51 (47%), Positives = 33/51 (64%)
Query: 284 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
++E C IC Y EE+R+LPC+H+FH C+D WLR CP+CK +L
Sbjct: 1767 SDEAKRCSICFEDYDHGEELRRLPCTHVFHKNCIDMWLRRSFVCPICKHDL 1817
>gi|242045404|ref|XP_002460573.1| hypothetical protein SORBIDRAFT_02g031050 [Sorghum bicolor]
gi|241923950|gb|EER97094.1| hypothetical protein SORBIDRAFT_02g031050 [Sorghum bicolor]
Length = 324
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G ++G S D ++ LPS YK D ++ GN+ +C IC + +E E + LPC
Sbjct: 239 VGTENRGLSADTLASLPSVTYKMQD--VQDGNTE------QCVICRVELEEGESLIALPC 290
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H++H +C++QWL+I CP+C E+
Sbjct: 291 KHLYHPECINQWLQINKVCPMCSAEV 316
>gi|402594007|gb|EJW87934.1| hypothetical protein WUBG_01157 [Wuchereria bancrofti]
Length = 510
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
GA+ +QI+R S YK + N P NE C +CL ++ EEVR L C+H+FH+
Sbjct: 426 GATVEQINRF-STTYKYIKEN-----DIPENEQERCTVCLNDFEMDEEVRALRCNHVFHV 479
Query: 315 KCVDQWLRILSCCPLCKQELER 336
C+D+WL CP+C+ ++++
Sbjct: 480 VCIDRWLVYNKKCPVCRLDVDK 501
>gi|21356709|ref|NP_650112.1| CG6923, isoform A [Drosophila melanogaster]
gi|24646071|ref|NP_731623.1| CG6923, isoform B [Drosophila melanogaster]
gi|386765608|ref|NP_001247056.1| CG6923, isoform C [Drosophila melanogaster]
gi|7299505|gb|AAF54693.1| CG6923, isoform A [Drosophila melanogaster]
gi|16197957|gb|AAL13749.1| LD22771p [Drosophila melanogaster]
gi|23171037|gb|AAN13524.1| CG6923, isoform B [Drosophila melanogaster]
gi|211938579|gb|ACJ13186.1| FI06048p [Drosophila melanogaster]
gi|220947268|gb|ACL86177.1| CG6923-PA [synthetic construct]
gi|220956714|gb|ACL90900.1| CG6923-PA [synthetic construct]
gi|383292652|gb|AFH06374.1| CG6923, isoform C [Drosophila melanogaster]
Length = 1256
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+RV E +ED E C ICL ++ + EVR+LPC
Sbjct: 1154 NRGATLETIERNTLP-HKYRRVRRPSET------DEDAEKCAICLNLFEIENEVRRLPCM 1206
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1207 HLFHTDCVDQWLVTNKHCPICRVDIE 1232
>gi|298705326|emb|CBJ49016.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1372
Score = 66.6 bits (161), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%)
Query: 282 APANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
A A +C ICL ++E + +RKLPC H FH KCVD+WL + CPLCK+
Sbjct: 1172 AEAASSADCAICLGGFEEGDVLRKLPCLHFFHQKCVDEWLHLSVSCPLCKR 1222
>gi|224137078|ref|XP_002327016.1| predicted protein [Populus trichocarpa]
gi|222835331|gb|EEE73766.1| predicted protein [Populus trichocarpa]
Length = 437
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 6/75 (8%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
++ LP Y++ G A + +C ICL Y+E +++R LPCSH FH+ CVD+W
Sbjct: 351 VNSLPLKNYQK-----SPGTENVAQHEQQCHICLVDYEEGDKIRVLPCSHEFHMACVDKW 405
Query: 321 LR-ILSCCPLCKQEL 334
L+ I CPLC+ ++
Sbjct: 406 LKDIHGVCPLCRDDV 420
>gi|51092240|gb|AAT94533.1| AT15166p [Drosophila melanogaster]
Length = 1256
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+RV E +ED E C ICL ++ + EVR+LPC
Sbjct: 1154 NRGATLETIERNTLP-HKYRRVRRPSET------DEDAEKCAICLNLFEIENEVRRLPCM 1206
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1207 HLFHTDCVDQWLVTNKHCPICRVDIE 1232
>gi|357159651|ref|XP_003578515.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 337
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 49/86 (56%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D ++ LPS YK D ++ GN+ +C IC +++E E + LPC
Sbjct: 252 VGTESRGLSADTLASLPSVTYKTKD--VQDGNTE------QCVICRVEFEEGESLVALPC 303
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H C++QWL+I CP+C E+
Sbjct: 304 KHSYHPDCINQWLQINKVCPMCSAEV 329
>gi|356571242|ref|XP_003553788.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Glycine
max]
Length = 506
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 71/145 (48%), Gaps = 13/145 (8%)
Query: 198 FGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS 257
F +Q AP H L + S P ++F++ C + G + AA + +
Sbjct: 350 FFDYQTAPPQHGL--RVFGIITSSIVGPAIIFVIAIACYASLKYRRGNTARIAAAQR-SE 406
Query: 258 DDQISRLPSWRYKRVD-SNLEA------GNS--APANEDPECCICLAKYKEKEEVRKLP- 307
IS PS +D S +E+ G S P D C ICL++YK K+ +R +P
Sbjct: 407 PSAISPQPSIATMGLDDSTIESYQKLVLGESRRVPGPNDGCCTICLSEYKTKDTIRCIPE 466
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQ 332
C+H FH +C+D+WLR+ S CP+C+
Sbjct: 467 CAHCFHAECIDEWLRMNSTCPVCRN 491
>gi|281204915|gb|EFA79109.1| hypothetical protein PPL_07934 [Polysphondylium pallidum PN500]
Length = 628
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 50/88 (56%), Gaps = 12/88 (13%)
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKL 306
++ +KGA+ I LP + ++ ++ +E CCICL++ + EEV+ L
Sbjct: 551 LDENVNNKGANIQSIKTLPIRKIEK-NTKIET-----------CCICLSQMEVNEEVKTL 598
Query: 307 PCSHMFHLKCVDQWLRILSCCPLCKQEL 334
PC H FH+ C+DQWL++ CP+ KQ +
Sbjct: 599 PCLHFFHIDCIDQWLKVNKICPIDKQSI 626
>gi|442618623|ref|NP_001262484.1| CG6923, isoform D [Drosophila melanogaster]
gi|440217328|gb|AGB95866.1| CG6923, isoform D [Drosophila melanogaster]
Length = 1265
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+RV E +ED E C ICL ++ + EVR+LPC
Sbjct: 1154 NRGATLETIERNTLP-HKYRRVRRPSET------DEDAEKCAICLNLFEIENEVRRLPCM 1206
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1207 HLFHTDCVDQWLVTNKHCPICRVDIE 1232
>gi|170587844|ref|XP_001898684.1| ring finger-H2 protein [Brugia malayi]
gi|158593954|gb|EDP32548.1| ring finger-H2 protein, putative [Brugia malayi]
Length = 488
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 49/82 (59%), Gaps = 6/82 (7%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
GA+ +QI+R S YK + N P NE C +CL ++ EEVR L C+H+FH+
Sbjct: 404 GATVEQINRF-STTYKYIKEN-----DIPENEQERCTVCLNDFEMDEEVRALRCNHVFHV 457
Query: 315 KCVDQWLRILSCCPLCKQELER 336
C+D+WL CP+C+ ++++
Sbjct: 458 VCIDRWLVYNKKCPVCRLDVDK 479
>gi|413948218|gb|AFW80867.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 340
Score = 66.6 bits (161), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + AA + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 200 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-----------ECLICLEEFHVGNEVRG 248
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 249 LPCAHNFHVECIDQWLRLNVKCPRCR 274
>gi|308505926|ref|XP_003115146.1| CRE-TOE-4 protein [Caenorhabditis remanei]
gi|308259328|gb|EFP03281.1| CRE-TOE-4 protein [Caenorhabditis remanei]
Length = 503
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 39/51 (76%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
ED C +CL+ +++ E +RKLPC+H+FH +C+ +WL I CP+C+++++R
Sbjct: 446 EDDTCTVCLSNFEDGESIRKLPCNHVFHPECIYKWLDINKKCPMCREDIDR 496
>gi|326679661|ref|XP_003201353.1| PREDICTED: e3 ubiquitin-protein ligase RNF6 [Danio rerio]
Length = 750
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G + +QI L + Y +V+ E G + C +C+ +Y + ++R+LPC+H FH
Sbjct: 672 RGLTKEQIDNLVTRTYGQVNLEGEQGRA--------CSVCINEYAQGNKLRRLPCAHEFH 723
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
+ C+D+WL + CP+C+Q +
Sbjct: 724 IHCIDRWLSENNTCPICRQPI 744
>gi|115460008|ref|NP_001053604.1| Os04g0571200 [Oryza sativa Japonica Group]
gi|113565175|dbj|BAF15518.1| Os04g0571200, partial [Oryza sativa Japonica Group]
Length = 290
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 249 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 207 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 258
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL+I CP+C +E+
Sbjct: 259 CEHQYHQTCVTKWLKINKVCPVCNKEV 285
>gi|195539967|gb|AAI67972.1| Unknown (protein for IMAGE:7068139) [Danio rerio]
Length = 711
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G + +QI L + Y +V+ E G + C +C+ +Y + ++R+LPC+H FH
Sbjct: 633 RGLTKEQIDNLVTRTYGQVNLEGEQGRA--------CSVCINEYAQGNKLRRLPCAHEFH 684
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
+ C+D+WL + CP+C+Q +
Sbjct: 685 IHCIDRWLSENNTCPICRQPI 705
>gi|168029222|ref|XP_001767125.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681621|gb|EDQ68046.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 271
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 44/87 (50%), Gaps = 13/87 (14%)
Query: 257 SDDQISRLPSWRYKRVDSNLEAGNSAPAN------------EDPECCICLAKYKEKEEVR 304
SD ISRLP YKR S + A + + E+ C +CL + E E +R
Sbjct: 164 SDTDISRLPVRVYKR-SSQIPAADQSQLRYDKIVQGEQKTLEELTCSVCLEQVVEGEIIR 222
Query: 305 KLPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC H FH C+D WLR + CP+CK
Sbjct: 223 TLPCVHQFHAACIDLWLRQQATCPVCK 249
>gi|215701052|dbj|BAG92476.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 254
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 249 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 171 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 222
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL+I CP+C +E+
Sbjct: 223 CEHQYHQTCVTKWLKINKVCPVCNKEV 249
>gi|195054421|ref|XP_001994123.1| GH17353 [Drosophila grimshawi]
gi|193895993|gb|EDV94859.1| GH17353 [Drosophila grimshawi]
Length = 1665
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+RV E +ED E C ICL+ ++ + +VR+LPC
Sbjct: 1563 NRGATLEIIERNTLPH-KYRRVRRPSET------DEDAEKCAICLSLFEIENDVRRLPCM 1615
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1616 HLFHTDCVDQWLVTNKHCPICRVDIE 1641
>gi|413924199|gb|AFW64131.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 513
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 11/77 (14%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
++ LP YK+++ AP D +C ICL +Y++ +++R LPC H FHL+CVD
Sbjct: 440 VNSLPCKSYKKLE--------APQRSDDMEQCHICLTEYEDGDQIRILPCKHEFHLQCVD 491
Query: 319 QWLR-ILSCCPLCKQEL 334
+WL+ I CPLC+ ++
Sbjct: 492 KWLKEIHRVCPLCRGDV 508
>gi|326525757|dbj|BAJ88925.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 346
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D ++ LPS YK D ++ GN+ +C IC +++E E + LPC
Sbjct: 261 VGTESRGLSADTLASLPSVTYKTKD--MQDGNT------EQCVICRVEFEEGESLVALPC 312
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
+H +H C++QWL+I CP+C E+
Sbjct: 313 NHSYHPDCINQWLQINKVCPMCSAEV 338
>gi|308081112|ref|NP_001183423.1| uncharacterized protein LOC100501846 [Zea mays]
gi|238011374|gb|ACR36722.1| unknown [Zea mays]
Length = 505
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 48/77 (62%), Gaps = 11/77 (14%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
++ LP YK+++ AP D +C ICL +Y++ +++R LPC H FHL+CVD
Sbjct: 432 VNSLPCKSYKKLE--------APQRSDDMEQCHICLTEYEDGDQIRILPCKHEFHLQCVD 483
Query: 319 QWLR-ILSCCPLCKQEL 334
+WL+ I CPLC+ ++
Sbjct: 484 KWLKEIHRVCPLCRGDV 500
>gi|209881207|ref|XP_002142042.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
gi|209557648|gb|EEA07693.1| zinc finger, C3HC4 type domain-containing protein [Cryptosporidium
muris RN66]
Length = 409
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 81/195 (41%), Gaps = 37/195 (18%)
Query: 178 LELFFAIWFVMGNVWVFD-----SRFGSFQRAPNLHVLCISLLAWNALSYS--------- 223
L + + IWF +G W+ + ++ + +L + + ++ LS S
Sbjct: 215 LSVIYYIWFTIGFYWILNVSNSQTQVNEIYESDSLIISWLHRRTYSLLSDSVQRIFANLS 274
Query: 224 --------FPFLLFLLLCCCVPLISSVLGYNMNM----------GAADKGASDDQISRLP 265
+PF L ++L C + +I + + + G K + D++ LP
Sbjct: 275 SVDIKSTIWPFYLLIMLFCTLRIILLLATFYLTFPLSTSHLEYPGNKTKSFTLDKLMMLP 334
Query: 266 -----SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
W Y++ + + N C ICL + + +R LPC+H FH C+D W
Sbjct: 335 VKTYSEWIYEKEQEEILNKKTNDRNIQDSCIICLTDFSCSDLIRCLPCNHSFHESCIDVW 394
Query: 321 LRILSCCPLCKQELE 335
L + CPLC+Q LE
Sbjct: 395 LLRSAVCPLCQQTLE 409
>gi|116310277|emb|CAH67282.1| OSIGBa0111L12.9 [Oryza sativa Indica Group]
Length = 254
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 249 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+G KG +D I+ LP+ YK R+ S E + EC IC YK ++ + KLP
Sbjct: 171 IGTESKGLPEDVIALLPTSTYKIRIFSRKEKHD--------ECVICCMTYKNRDRLTKLP 222
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL+I CP+C +E+
Sbjct: 223 CEHQYHQTCVTKWLKINKVCPVCNKEV 249
>gi|157887047|emb|CAP03014.1| NEP1-interacting protein [Spinacia oleracea]
Length = 235
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 7/82 (8%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
KG S D + ++P + + ++N +G E C +CL ++ E VR LP C H+F
Sbjct: 160 KGLSGDLVEKIPKIKITKNNNNDASG------ERVSCSVCLQDFQIGETVRSLPDCHHLF 213
Query: 313 HLKCVDQWLRILSCCPLCKQEL 334
HL C+D+WL + CPLC+++L
Sbjct: 214 HLPCIDKWLLKHASCPLCRRDL 235
>gi|224109496|ref|XP_002315216.1| predicted protein [Populus trichocarpa]
gi|222864256|gb|EEF01387.1| predicted protein [Populus trichocarpa]
Length = 276
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCS 309
G + G+S Q S S K+ D+ G+ ++++ C +CL + E +R LPC
Sbjct: 174 GPQNGGSSMQQASSSVSAEQKKQDTGNAIGSMKSSDDELTCSVCLEQVSMGEVIRTLPCL 233
Query: 310 HMFHLKCVDQWLRILSCCPLCK 331
H FH C+D WLR CP+CK
Sbjct: 234 HQFHANCIDPWLRQQGTCPVCK 255
>gi|159463100|ref|XP_001689780.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283768|gb|EDP09518.1| predicted protein [Chlamydomonas reinhardtii]
Length = 1408
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 5/81 (6%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
KGA ++Q++ LP+ D+ + APA C +C+ E V+++PC+H FH
Sbjct: 566 KGAKEEQLAALPT-EVLTADNPRRRSDGAPAT----CAVCMEDLVAGETVKRIPCAHEFH 620
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
C+DQWLR + CP+C+ ++
Sbjct: 621 ENCIDQWLRTKANCPICQPQV 641
>gi|308808894|ref|XP_003081757.1| FOG: Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
gi|116060223|emb|CAL56282.1| FOG: Predicted E3 ubiquitin ligase (ISS) [Ostreococcus tauri]
Length = 213
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 308
G AD+GAS +++ LPS ++R + ++A D C +CL + + E V+ LP C
Sbjct: 117 GEADRGASAVKVAELPSRTFRRSEGGVDA-------IDGMCAVCLDVFLDGEMVKTLPSC 169
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQ 332
+H FH C+D+WL CCP+C++
Sbjct: 170 AHEFHEACIDRWLLRRDCCPICRR 193
>gi|170061533|ref|XP_001866274.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167879738|gb|EDS43121.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 327
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 252 ADKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPC 308
++GA+ + I P +YKR+ E +ED E C ICL+++ +E+VR+LPC
Sbjct: 240 TNRGATQEMIEHNTFPH-KYKRLRRASET------DEDSEKCTICLSQFIPQEDVRRLPC 292
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 293 MHLFHKDCVDQWLVTNKHCPICRVDIE 319
>gi|195112014|ref|XP_002000571.1| GI22448 [Drosophila mojavensis]
gi|193917165|gb|EDW16032.1| GI22448 [Drosophila mojavensis]
Length = 1503
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 54/86 (62%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+RV E+ +ED E C ICL+ ++ + +VR+LPC
Sbjct: 1396 NRGATLEIIERNTLP-HKYRRVRRPSES------DEDAEKCAICLSLFEIENDVRRLPCM 1448
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1449 HLFHTDCVDQWLVTNKHCPICRVDIE 1474
>gi|414590063|tpg|DAA40634.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 323
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G ++G S D ++ LPS YK +++ GN+ +C IC + +E E + LPC
Sbjct: 238 VGTENRGLSADALASLPSVTYKM--QSVQDGNTE------QCVICRVELEEGESLIALPC 289
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H++H +C++QWL+I CP+C E+
Sbjct: 290 KHLYHPECINQWLQINKVCPMCSAEV 315
>gi|195395880|ref|XP_002056562.1| GJ11010 [Drosophila virilis]
gi|194143271|gb|EDW59674.1| GJ11010 [Drosophila virilis]
Length = 1477
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 53/86 (61%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+RV E +ED E C ICL+ ++ + +VR+LPC
Sbjct: 1369 NRGATLEIIERNTLP-HKYRRVRRPSET------DEDAEKCAICLSLFEIENDVRRLPCM 1421
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1422 HLFHTDCVDQWLVTNKHCPICRVDIE 1447
>gi|195329748|ref|XP_002031572.1| GM26076 [Drosophila sechellia]
gi|194120515|gb|EDW42558.1| GM26076 [Drosophila sechellia]
Length = 1257
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 52/86 (60%), Gaps = 10/86 (11%)
Query: 253 DKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCS 309
++GA+ + I R LP +Y+R+ E +ED E C ICL ++ + EVR+LPC
Sbjct: 1152 NRGATLETIERNTLP-HKYRRIRRPSET------DEDAEKCAICLNLFEIENEVRRLPCM 1204
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 1205 HLFHTDCVDQWLVTNKHCPICRVDIE 1230
>gi|356506304|ref|XP_003521925.1| PREDICTED: uncharacterized protein LOC100810553 [Glycine max]
Length = 397
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 286 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
E +C ICLA+YKEKE +R +P C H FHL C+D WLR S CP+C+ L+
Sbjct: 291 ETTQCVICLAEYKEKELLRIIPKCGHTFHLSCIDMWLRKQSTCPVCRLSLQ 341
>gi|4959044|gb|AAD34209.1|AF069992_1 LIM domain interacting RING finger protein [Mus musculus]
Length = 600
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 33/43 (76%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E +++RKLPCSH FH+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGDKLRKLPCSHEFHVHCIDRWLSENSTCPICRR 588
>gi|357507109|ref|XP_003623843.1| RING finger protein [Medicago truncatula]
gi|124360239|gb|ABN08252.1| Zinc finger, RING-type [Medicago truncatula]
gi|124360861|gb|ABN08833.1| Zinc finger, RING-type [Medicago truncatula]
gi|355498858|gb|AES80061.1| RING finger protein [Medicago truncatula]
gi|388496154|gb|AFK36143.1| unknown [Medicago truncatula]
Length = 190
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
D G I +P+ ++ N EA + A ED +C ICLA YKE+E +R +P C H
Sbjct: 61 DPGTEPVLIEAIPTLKF-----NQEAFS---AIEDTQCVICLADYKEREILRIMPKCGHT 112
Query: 312 FHLKCVDQWLRILSCCPLCK 331
FHL C+D WLR S CP+C+
Sbjct: 113 FHLSCIDIWLRKQSTCPVCR 132
>gi|118352226|ref|XP_001009386.1| RING finger protein [Tetrahymena thermophila]
gi|89291153|gb|EAR89141.1| RING finger protein [Tetrahymena thermophila SB210]
Length = 1202
Score = 65.9 bits (159), Expect = 3e-08, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 31/45 (68%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
C ICL + E E+V++L C H FH+ CVD WL+I CPLC+Q L
Sbjct: 1137 CAICLNDFDEGEKVKELNCEHRFHISCVDDWLKIKGSCPLCRQNL 1181
>gi|410918361|ref|XP_003972654.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 467
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +PS+++ + + +E C +C+ ++ ++ +R LPCSH
Sbjct: 390 AKPRGLTKADIEHIPSYKFNSNNHH---------SEQTMCVVCMCDFESRQLLRVLPCSH 440
Query: 311 MFHLKCVDQWLRILSCCPLCKQELER 336
FH KCVD+WL+ CP+C+ E++R
Sbjct: 441 EFHAKCVDKWLKANRTCPICRAEVQR 466
>gi|242050126|ref|XP_002462807.1| hypothetical protein SORBIDRAFT_02g032320 [Sorghum bicolor]
gi|241926184|gb|EER99328.1| hypothetical protein SORBIDRAFT_02g032320 [Sorghum bicolor]
Length = 217
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
KG D + +LP+ + EA +E PEC ICLA++ +EVR LP C H F
Sbjct: 90 KGIEKDALEKLPTVPF-------EAAGHDDVDERPECAICLAEFARGDEVRVLPPCGHAF 142
Query: 313 HLKCVDQWLRILSCCPLCKQEL 334
H CVD WL S CP C+ L
Sbjct: 143 HAACVDTWLLCTSTCPSCRTAL 164
>gi|357142455|ref|XP_003572578.1| PREDICTED: RING-H2 finger protein ATL10-like [Brachypodium
distachyon]
Length = 287
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 36/53 (67%), Gaps = 1/53 (1%)
Query: 283 PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
PA E+ +C +CL +Y+ K+ VR LP C H FH+ C+D WL+ S CP+C+ +
Sbjct: 96 PAQEESQCTVCLEEYEAKDVVRVLPFCGHAFHVACIDAWLKQQSTCPICRASM 148
>gi|357117891|ref|XP_003560695.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 315
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 53/97 (54%), Gaps = 9/97 (9%)
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLE-------AGNS-APANEDPECCICLA 295
G+ +G+ D G S D I+ LP++ Y+ + + AG+S + E EC +CL
Sbjct: 70 GHGALLGSDDLGLSMDDITALPTFTYRSRAAPMTPQSLSRCAGSSRSKGREAVECVVCLQ 129
Query: 296 KYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
+ + + VR LP C H FH C+D WLR S CP+C+
Sbjct: 130 ELVDGDVVRVLPACKHFFHGGCIDVWLRTRSSCPVCR 166
>gi|422294236|gb|EKU21536.1| atp synthetase alpha chain -like protein [Nannochloropsis gaditana
CCMP526]
gi|422294277|gb|EKU21577.1| atp synthetase alpha chain -like protein [Nannochloropsis gaditana
CCMP526]
Length = 502
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 44/78 (56%), Gaps = 8/78 (10%)
Query: 257 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
S + +RLP Y +SNL ECCICL ++ + VRKLPC H++H +C
Sbjct: 237 SPQEKARLPIAPYDPGESNLYNFR--------ECCICLTDFERTDLVRKLPCGHVYHSEC 288
Query: 317 VDQWLRILSCCPLCKQEL 334
VD W + S CPLCK ++
Sbjct: 289 VDCWFSVNSVCPLCKSDV 306
>gi|405967730|gb|EKC32861.1| E3 ubiquitin-protein ligase arkadia-B [Crassostrea gigas]
Length = 735
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 37/47 (78%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL++++ +E+VR+LPC H+FH+ CVDQWL CP+C+ ++E
Sbjct: 679 KCTICLSEFEIEEDVRRLPCMHLFHIPCVDQWLTTNKKCPICRVDIE 725
>gi|359486069|ref|XP_002272258.2| PREDICTED: E3 ubiquitin-protein ligase RING1-like [Vitis vinifera]
Length = 282
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
DP C +C +Y+ EEVR++PC HM+H C+ WLRI + CP+C+ ELE
Sbjct: 200 DPCCPVCKEEYQAGEEVREMPCKHMYHSDCIVPWLRIHNSCPVCRHELE 248
>gi|195108127|ref|XP_001998644.1| GI23522 [Drosophila mojavensis]
gi|193915238|gb|EDW14105.1| GI23522 [Drosophila mojavensis]
Length = 1020
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS++Y + + +G+ + C +C+ ++ ++ +R LPCSH
Sbjct: 887 AKPRGLTRNEIDQLPSYKY---NPDAHSGDQS------SCVVCMCDFELRQLLRVLPCSH 937
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 938 EFHAKCVDKWLRSNRTCPICR 958
>gi|390355526|ref|XP_790205.3| PREDICTED: uncharacterized protein LOC585279 isoform 2
[Strongylocentrotus purpuratus]
Length = 492
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G S I +LPS+RY N E + N+ C +C++ ++ ++ +R LPCSH
Sbjct: 408 AKPRGLSKANIDQLPSYRY-----NPETPRTI--NDQTCCVVCMSDFETRQTLRVLPCSH 460
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH +CVD+WL+ CP+C+ +
Sbjct: 461 EFHARCVDKWLKSNRTCPICRAD 483
>gi|407920977|gb|EKG14150.1| Zinc finger RING-type protein [Macrophomina phaseolina MS6]
Length = 585
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 7/103 (6%)
Query: 238 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP----ECCIC 293
+IS ++ N G A AS + I+ LP R R + AG+S P D EC IC
Sbjct: 277 VISQLMEQNA-TGNAPGPASAEAIAALPKKRVTR--QMVGAGDSPPDFPDDQLHGECSIC 333
Query: 294 LAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
+ + EEV +LPC H FH +C++ WLR CP C++ +E+
Sbjct: 334 MDEVPIGEEVTELPCGHWFHGQCIEAWLREHDTCPHCRKGIEK 376
>gi|242057653|ref|XP_002457972.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
gi|241929947|gb|EES03092.1| hypothetical protein SORBIDRAFT_03g024030 [Sorghum bicolor]
Length = 374
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + AA + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 200 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 248
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 249 LPCAHNFHVECIDQWLRLNVKCPRCR 274
>gi|357127651|ref|XP_003565492.1| PREDICTED: RING-H2 finger protein ATL1-like [Brachypodium
distachyon]
Length = 219
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G +S LP Y++ +S A + D C +CL++ + ++VR+LP C H+F
Sbjct: 82 RGLDASALSALPVTAYRKKESAAGASAGGGPDSD--CAVCLSELTDGDKVRELPNCGHVF 139
Query: 313 HLKCVDQWLRILSCCPLCKQELE 335
H+ CVD WLR + CPLC+ E E
Sbjct: 140 HVDCVDAWLRSTTTCPLCRAEAE 162
>gi|410909057|ref|XP_003968007.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Takifugu
rubripes]
Length = 519
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 441 RGLTKEQIDNLATRTYGQASLEGEIGRA--------CSVCINEYAQGNKLRRLPCSHEFH 492
Query: 314 LKCVDQWLRILSCCPLCKQ 332
+ C+D+WL + CP+C+Q
Sbjct: 493 IHCIDRWLSENNTCPICRQ 511
>gi|390355528|ref|XP_003728567.1| PREDICTED: uncharacterized protein LOC585279 isoform 1
[Strongylocentrotus purpuratus]
Length = 514
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 49/83 (59%), Gaps = 7/83 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G S I +LPS+RY N E + N+ C +C++ ++ ++ +R LPCSH
Sbjct: 430 AKPRGLSKANIDQLPSYRY-----NPETPRTI--NDQTCCVVCMSDFETRQTLRVLPCSH 482
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH +CVD+WL+ CP+C+ +
Sbjct: 483 EFHARCVDKWLKSNRTCPICRAD 505
>gi|297846582|ref|XP_002891172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297337014|gb|EFH67431.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 328
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 29/150 (19%)
Query: 200 SFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV--------PLISSVLGYNMNMGA 251
S QR + + I +L + LLF L CCV P +S G
Sbjct: 38 SAQRPKQIPAVIIGMLMFT--------LLFSLFACCVCFKYTSTSPHGTSSDTEEGGHGE 89
Query: 252 ------ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G D I+ PS+ Y +V L+ G EC ICL +++++E +R
Sbjct: 90 VAFTRRTSRGLGKDVITSFPSFLYSQV-KGLKIGKGGV-----ECAICLNEFEDEETLRL 143
Query: 306 LP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+P CSH+FH C+D WL S CP+C+ L
Sbjct: 144 MPPCSHVFHASCIDVWLSSRSTCPVCRASL 173
>gi|356542379|ref|XP_003539644.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Glycine max]
Length = 274
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 41/82 (50%), Gaps = 7/82 (8%)
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCS 309
G+A +S D + K+ EAG P +E C ICL + K E VR LPC
Sbjct: 179 GSAGLASSSD------AAEVKQESGGTEAGTGGPEDE-LTCTICLDQVKRGELVRSLPCL 231
Query: 310 HMFHLKCVDQWLRILSCCPLCK 331
H FH C+D WLR CP+CK
Sbjct: 232 HQFHANCIDPWLRQQGTCPVCK 253
>gi|347969289|ref|XP_003436399.1| AGAP013357-PA [Anopheles gambiae str. PEST]
gi|333468455|gb|EGK96956.1| AGAP013357-PA [Anopheles gambiae str. PEST]
Length = 2020
Score = 65.5 bits (158), Expect = 3e-08, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 52/92 (56%), Gaps = 10/92 (10%)
Query: 247 MNMGAADKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEV 303
M +GAS + I P +YKR+ ++ +ED E C ICL++++ +V
Sbjct: 1840 MEDSCTSRGASQEMIETHTFPH-KYKRLR------RASETDEDSEKCTICLSQFEIDNDV 1892
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
R+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1893 RRLPCMHLFHKDCVDQWLVTNKHCPICRVDIE 1924
>gi|218196079|gb|EEC78506.1| hypothetical protein OsI_18434 [Oryza sativa Indica Group]
Length = 394
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + AA + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 211 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 259
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 260 LPCAHNFHVECIDQWLRLNVKCPRCR 285
>gi|432930094|ref|XP_004081317.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oryzias latipes]
Length = 724
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 646 RGLTKEQIDNLSTRTYSQASLEGEIGRA--------CSVCINEYAQGNKLRRLPCSHEFH 697
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
+ C+D+WL + CP+C+Q +
Sbjct: 698 IHCIDRWLSENNTCPICRQPI 718
>gi|147765316|emb|CAN66948.1| hypothetical protein VITISV_020095 [Vitis vinifera]
Length = 915
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Query: 227 LLFLLLC------CCVPLISSVLGYNMNMGAADK------GASDDQISRLPSWRYKRVDS 274
L FLLL VP S + N+ D+ G + LP +R+ S
Sbjct: 552 LTFLLLAYAKFCHVAVPDFSDFDNHQQNLHGIDRERLRSSGIDKRVMESLPFFRF----S 607
Query: 275 NLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQE 333
+L+ + E EC +CL+K++E E +R LP C H FH+ C+DQWL S CPLC+ +
Sbjct: 608 SLKG-----SKEGLECAVCLSKFEEIEVLRLLPNCRHAFHINCIDQWLESHSSCPLCRYK 662
Query: 334 LE 335
+
Sbjct: 663 FD 664
>gi|326533810|dbj|BAK05436.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 172
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 34/155 (21%)
Query: 190 NVWVF--DSRFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLIS------- 240
N W+F +SR+ + R L + LS++ L FLL S
Sbjct: 5 NSWLFADNSRYSTRAR-----------LVFMGLSFAIGILTFLLYLAIWYTCSRRSRRQR 53
Query: 241 SVLGYNMNMGAA---DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKY 297
+ ++ GAA ++G SD I+ LP++ Y++ D + +C +CL +
Sbjct: 54 GPVADDLESGAAAGTERGMSDAAIAALPTFLYEQPDDDAAV----------DCAVCLGQL 103
Query: 298 KEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
+ E+ R+LP C+H+FH +CVD WLR CP+C+
Sbjct: 104 EAGEKARRLPKCAHLFHAECVDAWLRAHCTCPMCR 138
>gi|47223363|emb|CAG04224.1| unnamed protein product [Tetraodon nigroviridis]
Length = 344
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 270 RGLTKEQIDNLATRTYGQASLEGEMGRA--------CSVCINEYAQGNKLRRLPCSHEFH 321
Query: 314 LKCVDQWLRILSCCPLCKQ 332
+ C+D+WL + CP+C+Q
Sbjct: 322 IHCIDRWLSENNTCPICRQ 340
>gi|298204569|emb|CBI23844.3| unnamed protein product [Vitis vinifera]
Length = 278
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
DP C +C +Y+ EEVR++PC HM+H C+ WLRI + CP+C+ ELE
Sbjct: 200 DPCCPVCKEEYQAGEEVREMPCKHMYHSDCIVPWLRIHNSCPVCRHELE 248
>gi|443723425|gb|ELU11856.1| hypothetical protein CAPTEDRAFT_219920, partial [Capitella teleta]
Length = 265
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 49/79 (62%), Gaps = 7/79 (8%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMF 312
+KG D +I LP+ Y + S L+ N C ICL+++++KEEVR+LPC H +
Sbjct: 185 NKGLQDGEIECLPTSNYFKPTS-LDDDNLL------TCKICLSEFEDKEEVRRLPCLHQY 237
Query: 313 HLKCVDQWLRILSCCPLCK 331
H C+D+WLR+ + CP C+
Sbjct: 238 HTACIDEWLRMKAQCPTCR 256
>gi|115462059|ref|NP_001054629.1| Os05g0145000 [Oryza sativa Japonica Group]
gi|51038194|gb|AAT93997.1| unknow protein [Oryza sativa Japonica Group]
gi|113578180|dbj|BAF16543.1| Os05g0145000 [Oryza sativa Japonica Group]
gi|215706903|dbj|BAG93363.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222630174|gb|EEE62306.1| hypothetical protein OsJ_17095 [Oryza sativa Japonica Group]
Length = 386
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + AA + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 201 GLYLTAAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 249
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 250 LPCAHNFHVECIDQWLRLNVKCPRCR 275
>gi|317419922|emb|CBN81958.1| RING finger protein 6, partial [Dicentrarchus labrax]
Length = 283
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 8/79 (10%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 205 RGLTKEQIDNLSTRTYGQASLEGEMGRA--------CSVCINEYAQGNKLRRLPCSHEFH 256
Query: 314 LKCVDQWLRILSCCPLCKQ 332
+ C+D+WL + CP+C+Q
Sbjct: 257 IHCIDRWLSENNTCPICRQ 275
>gi|194746673|ref|XP_001955801.1| GF16054 [Drosophila ananassae]
gi|190628838|gb|EDV44362.1| GF16054 [Drosophila ananassae]
Length = 854
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 50/81 (61%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS++Y + ++ G+ + C +C+ ++ ++ +R LPCSH
Sbjct: 725 AKPRGLTRNEIDQLPSYKY---NPDVHNGDQS------SCVVCMCDFELRQLLRVLPCSH 775
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 776 EFHAKCVDKWLRSNRTCPICR 796
>gi|10129643|emb|CAC08239.1| Pspzf zinc finger protein-like [Arabidopsis thaliana]
Length = 498
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 242 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGN-SAPANEDPECCICLAKYKE 299
+L MG S++ +SR L Y+ D E G+ S ++D +C IC +Y +
Sbjct: 401 LLALGDKMGTVSTALSEEALSRSLKQSIYQETD---ETGSISLYKDDDIKCSICQEEYVD 457
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E+ +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 458 GDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAE 493
>gi|444730977|gb|ELW71346.1| E3 ubiquitin-protein ligase Arkadia [Tupaia chinensis]
Length = 961
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 12/125 (9%)
Query: 222 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP-SWRYKRVDSN----- 275
Y P L L +PL+ ++ +G ++GAS I R +YK+V ++
Sbjct: 831 YHAPPRLHHLQLGALPLME-LIHLEERLGNVNRGASQGTIERCTYPHKYKKVTTDWFSQR 889
Query: 276 -----LEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
+ + + +C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C
Sbjct: 890 KLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPIC 949
Query: 331 KQELE 335
+ ++E
Sbjct: 950 RVDIE 954
>gi|403353724|gb|EJY76407.1| hypothetical protein OXYTRI_02086 [Oxytricha trifallax]
Length = 354
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G S ++ RL S +Y+ V+++LE E CCICL + + + VR+L C HMFH
Sbjct: 275 EGLSSIELLRLQSEKYQ-VNTDLE--------ESESCCICLDNFTQDQFVRRLGCKHMFH 325
Query: 314 LKCVDQWLRILSCCPLCK 331
C+D+WL CPLCK
Sbjct: 326 KTCLDKWLIRCGACPLCK 343
>gi|359476036|ref|XP_002281341.2| PREDICTED: E3 ubiquitin-protein ligase ATL42-like [Vitis vinifera]
Length = 413
Score = 65.5 bits (158), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 60/122 (49%), Gaps = 22/122 (18%)
Query: 227 LLFLLLC------CCVPLISSVLGYNMNMGAADK------GASDDQISRLPSWRYKRVDS 274
L FLLL VP S + N+ D+ G + LP +R+ S
Sbjct: 50 LTFLLLAYAKFCHVAVPDFSDFDNHQQNLHGLDRERLRSSGIDKRVMESLPFFRF----S 105
Query: 275 NLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQE 333
+L+ + E EC +CL+K++E E +R LP C H FH+ C+DQWL S CPLC+ +
Sbjct: 106 SLKG-----SKEGLECAVCLSKFEEIEVLRLLPNCRHAFHINCIDQWLESHSSCPLCRYK 160
Query: 334 LE 335
+
Sbjct: 161 FD 162
>gi|268569244|ref|XP_002640470.1| Hypothetical protein CBG13603 [Caenorhabditis briggsae]
Length = 502
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 37/51 (72%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
ED C +CL ++ E +RKLPC+H+FH +C+ +WL I CP+C++E++R
Sbjct: 433 EDDTCTVCLNNFEAGESIRKLPCNHLFHPECIYKWLDINKKCPMCREEIDR 483
>gi|195995807|ref|XP_002107772.1| hypothetical protein TRIADDRAFT_18741 [Trichoplax adhaerens]
gi|190588548|gb|EDV28570.1| hypothetical protein TRIADDRAFT_18741, partial [Trichoplax
adhaerens]
Length = 49
Score = 65.1 bits (157), Expect = 4e-08, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 36/45 (80%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
C IC+ YK++E++R+LPCSH FH +CVD+WLR + CP+C++ +
Sbjct: 1 CAICMDDYKKREKIRELPCSHGFHARCVDKWLRQHNSCPICRENI 45
>gi|20466428|gb|AAM20531.1| Pspzf zinc finger protein-like [Arabidopsis thaliana]
Length = 525
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 242 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGN-SAPANEDPECCICLAKYKE 299
+L MG S++ +SR L Y+ D E G+ S ++D +C IC +Y +
Sbjct: 428 LLALGDKMGTVSTALSEEALSRSLKQSIYQETD---ETGSISLYKDDDIKCSICQEEYVD 484
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E+ +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 485 GDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAE 520
>gi|357127649|ref|XP_003565491.1| PREDICTED: RING-H2 finger protein ATL32-like [Brachypodium
distachyon]
Length = 204
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 254 KGASDDQISRLPSWRY-KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
+G +S LP Y K+ ++ D +C +CL++ + ++VR+LP C H+
Sbjct: 86 RGLDASALSALPVTAYRKKKQERRAGASAGGGGPDSDCAVCLSELADGDKVRELPNCGHV 145
Query: 312 FHLKCVDQWLRILSCCPLCKQELE 335
FHL+CVD WLR + CPLC+ E E
Sbjct: 146 FHLECVDAWLRSRTTCPLCRAEAE 169
>gi|222423625|dbj|BAH19781.1| AT5G10650 [Arabidopsis thaliana]
Length = 525
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 242 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGN-SAPANEDPECCICLAKYKE 299
+L MG S++ +SR L Y+ D E G+ S ++D +C IC +Y +
Sbjct: 428 LLALGDKMGTVSTALSEEALSRSLKQSIYQETD---ETGSISLYKDDDIKCSICQEEYVD 484
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E+ +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 485 GDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAE 520
>gi|22326712|ref|NP_196626.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|79327651|ref|NP_001031869.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|53850555|gb|AAU95454.1| At5g10650 [Arabidopsis thaliana]
gi|58652060|gb|AAW80855.1| At5g10650 [Arabidopsis thaliana]
gi|332004193|gb|AED91576.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|332004194|gb|AED91577.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 525
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 5/96 (5%)
Query: 242 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGN-SAPANEDPECCICLAKYKE 299
+L MG S++ +SR L Y+ D E G+ S ++D +C IC +Y +
Sbjct: 428 LLALGDKMGTVSTALSEEALSRSLKQSIYQETD---ETGSISLYKDDDIKCSICQEEYVD 484
Query: 300 KEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E+ +PC HM+H+ CV QWLR+ + CP+CK E
Sbjct: 485 GDELGTIPCQHMYHVSCVQQWLRMKNWCPICKTSAE 520
>gi|115435248|ref|NP_001042382.1| Os01g0213400 [Oryza sativa Japonica Group]
gi|14164470|dbj|BAB55721.1| ring-H2 zinc finger protein-like [Oryza sativa Japonica Group]
gi|113531913|dbj|BAF04296.1| Os01g0213400 [Oryza sativa Japonica Group]
gi|125569502|gb|EAZ11017.1| hypothetical protein OsJ_00862 [Oryza sativa Japonica Group]
gi|215695552|dbj|BAG90743.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 237
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 283 PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
P +C +CL++ + E+VR+LP C H+FH++CVD WLR + CPLC+ E E
Sbjct: 122 PGATAADCAVCLSELADGEKVRELPNCRHVFHVECVDAWLRSRTTCPLCRAEAE 175
>gi|157105744|ref|XP_001649008.1| hypothetical protein AaeL_AAEL004356 [Aedes aegypti]
gi|108880039|gb|EAT44264.1| AAEL004356-PA [Aedes aegypti]
Length = 517
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 52/87 (59%), Gaps = 10/87 (11%)
Query: 252 ADKGASDDQISR--LPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPC 308
+++GA+ + I P +YKR+ E +ED E C ICL++++ +VR+LPC
Sbjct: 429 SNRGATQEMIEHNTFP-HKYKRLRRASET------DEDSEKCTICLSQFEVDNDVRRLPC 481
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH CVDQWL CP+C+ ++E
Sbjct: 482 MHLFHKDCVDQWLVTNKHCPICRVDIE 508
>gi|224133604|ref|XP_002327636.1| predicted protein [Populus trichocarpa]
gi|222836721|gb|EEE75114.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
KG D + ++P R ++ E+G E C +CL ++ E VR LP C
Sbjct: 146 GGSKGLPGDSLEKIPKIRITSNNNVDESG------EKVSCSVCLQDFQLGETVRSLPHCH 199
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
HMFHL C+D+WL + CPLC+++L
Sbjct: 200 HMFHLPCIDKWLLRHASCPLCRRDL 224
>gi|356507234|ref|XP_003522374.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 339
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 99/248 (39%), Gaps = 41/248 (16%)
Query: 96 LVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYASQVDGFSLPD 155
++ SI ++ + +S P+ IW V D + + LL L + F P
Sbjct: 18 MLATSIAIVAINWKRYQSCTHPLHIWTV-VDYAAVFTFRLLMFVDNGLASGMGLDFGWP- 75
Query: 156 VEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRF---GSFQRAPNLHVLCI 212
QR + +++ L F W ++G +W +++ G Q+
Sbjct: 76 ---QRYARFCGRVVVLSILALLLYPFLWAWTIIGTLWFSNTKICLPGGGQK--------W 124
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKG---------ASDDQISR 263
L W SY LL C+ + + M A +G A + I
Sbjct: 125 GFLIWLLFSYCG-----LLCIACLAMRKWLKRRQARMLGAQEGIPVSAFGREAVEALIQE 179
Query: 264 LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRI 323
LPS+R V +N EC ICL ++ +VR LPC+H FH++C+D+WLR+
Sbjct: 180 LPSFRLTAVPTNCS-----------ECLICLEEFHVGNQVRGLPCAHNFHVECIDEWLRL 228
Query: 324 LSCCPLCK 331
CP C+
Sbjct: 229 NVNCPRCR 236
>gi|15242616|ref|NP_198841.1| RING-H2 finger protein ATL46 [Arabidopsis thaliana]
gi|68565290|sp|Q9FL07.1|ATL46_ARATH RecName: Full=RING-H2 finger protein ATL46
gi|10177512|dbj|BAB10906.1| RING zinc finger protein-like [Arabidopsis thaliana]
gi|51970768|dbj|BAD44076.1| RING finger -like protein [Arabidopsis thaliana]
gi|332007142|gb|AED94525.1| RING-H2 finger protein ATL46 [Arabidopsis thaliana]
Length = 376
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLP-CSH 310
D G I LP + YK + + G A ++P +C +CL ++ EK+++R LP CSH
Sbjct: 105 DSGLDQAFIDALPVFHYKEIVGSAGGGGGNGAAQEPFDCAVCLCEFSEKDKLRLLPMCSH 164
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
FHL C+D WL+ S CPLC+ L
Sbjct: 165 AFHLNCIDTWLQSNSTCPLCRGTL 188
>gi|340713250|ref|XP_003395158.1| PREDICTED: hypothetical protein LOC100651676 [Bombus terrestris]
Length = 631
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 249 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
M A GA+ + I S +YKR + NS A E +C ICL+++++ E VR+LP
Sbjct: 538 MAAISCGATQESIESHTFRHKYKR---EKKVENSEDAIE--KCTICLSEFEDCESVRRLP 592
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQELE 335
C H+FH+ CVDQWL CP+C+ ++E
Sbjct: 593 CMHLFHIDCVDQWLCTNKRCPICRVDIE 620
>gi|432899466|ref|XP_004076572.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Oryzias
latipes]
Length = 395
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 257 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
+ +Q+ R+P+ R+ + D + C ICL +Y+E +++R LPCSH +H KC
Sbjct: 220 TKEQLKRIPTHRFTKGD------------DYDVCAICLDEYEEGDKLRVLPCSHAYHCKC 267
Query: 317 VDQWL-RILSCCPLCKQELER 336
VD WL + CP+CKQ + R
Sbjct: 268 VDPWLTQTKKTCPVCKQRVTR 288
>gi|260830993|ref|XP_002610444.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
gi|229295810|gb|EEN66454.1| hypothetical protein BRAFLDRAFT_124262 [Branchiostoma floridae]
Length = 1022
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/86 (33%), Positives = 46/86 (53%), Gaps = 15/86 (17%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---CCICLAKYKEKEEVRKLP 307
A +G S +I LPS+RY P N + C +C+ ++ ++ +R LP
Sbjct: 940 AKPRGMSKAKIEDLPSYRYN------------PDNHQSQQTLCVVCMCDFENRQLLRVLP 987
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQE 333
C+H FH KCVD+WL+ CP+C+ +
Sbjct: 988 CNHEFHAKCVDKWLKSNRTCPICRAD 1013
>gi|148223407|ref|NP_001085602.1| E3 ubiquitin-protein ligase RNF181 [Xenopus laevis]
gi|82201112|sp|Q6GPV5.1|RN181_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF181; AltName:
Full=RING finger protein 181
gi|49256561|gb|AAH73002.1| MGC82583 protein [Xenopus laevis]
Length = 156
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP--ECCICLAKYKEKE 301
G ++++GA D D RLP K+V +L P D +C +CL +++E E
Sbjct: 34 GMDIDLGAVDFTEWD---QRLPPPASKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGE 90
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
VR+LPC H+FH C+ WL + CPLC+ EL
Sbjct: 91 TVRQLPCEHLFHSACILPWLGKTNSCPLCRHEL 123
>gi|224113387|ref|XP_002316478.1| predicted protein [Populus trichocarpa]
gi|222865518|gb|EEF02649.1| predicted protein [Populus trichocarpa]
Length = 177
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 20/149 (13%)
Query: 197 RFGSFQRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADK-- 254
RFG F + + +S +A L+Y F C PL + ++ ++ D+
Sbjct: 13 RFGGFALTFGISMGVLSAIAIAILAYYF--------CTRKPLPAGHSNHDGSLSIDDQDS 64
Query: 255 -----GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRKLP- 307
G + ++ P Y L G+ + A CC ICLA YK+ + +R LP
Sbjct: 65 VVIEIGLDEATLNTYPKLVYSEAKEKLGKGDDSVAAS---CCSICLADYKDSDLLRLLPD 121
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQELER 336
C H+FH +C+D WL++ + CP+C+ R
Sbjct: 122 CDHLFHAQCIDPWLKLHTTCPMCRNSPVR 150
>gi|225468578|ref|XP_002263471.1| PREDICTED: NEP1-interacting protein 1 [Vitis vinifera]
gi|296084057|emb|CBI24445.3| unnamed protein product [Vitis vinifera]
Length = 235
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+ G A KG D + ++P D+N +A + E C +CL ++ E VR LP
Sbjct: 155 DTGGA-KGLPGDSVEKIPKITITS-DNNGDA-----SGEKVSCSVCLQDFQLGETVRSLP 207
Query: 308 -CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C HMFHL C+D+WL CPLC+++L
Sbjct: 208 HCHHMFHLPCIDKWLLGHGSCPLCRRDL 235
>gi|242062944|ref|XP_002452761.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
gi|241932592|gb|EES05737.1| hypothetical protein SORBIDRAFT_04g032025 [Sorghum bicolor]
Length = 89
Score = 65.1 bits (157), Expect = 5e-08, Method: Composition-based stats.
Identities = 27/66 (40%), Positives = 41/66 (62%), Gaps = 5/66 (7%)
Query: 276 LEAGNSAP-----ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
+E G + P A ED ECCIC++ Y + ++ +LPC H FH C+++WLRI CPLC
Sbjct: 14 IECGTNQPIEKVLAAEDAECCICISAYDDGAKLCELPCGHHFHCICINKWLRINVMCPLC 73
Query: 331 KQELER 336
+ + +
Sbjct: 74 QYNVPK 79
>gi|223995979|ref|XP_002287663.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976779|gb|EED95106.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 319
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 47/82 (57%), Gaps = 4/82 (4%)
Query: 255 GASDDQISRLPSWRYKRVDSNL----EAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
GA+D +I+R PS + D L + + AN++ C +CL +Y+ + VR +PC H
Sbjct: 234 GATDAEINRCPSRTLEVGDDLLRPRTQQQQADGANDEHRCSVCLEQYQVGDVVRTIPCFH 293
Query: 311 MFHLKCVDQWLRILSCCPLCKQ 332
FH C+D W+R + CP+CK
Sbjct: 294 SFHASCIDPWMREKAECPVCKH 315
>gi|350420241|ref|XP_003492446.1| PREDICTED: hypothetical protein LOC100747900 [Bombus impatiens]
Length = 626
Score = 65.1 bits (157), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 53/88 (60%), Gaps = 6/88 (6%)
Query: 249 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
M A GA+ + I S +YKR + NS A E +C ICL+++++ E VR+LP
Sbjct: 533 MAAISCGATQESIESHTFRHKYKR---EKKVENSEDAIE--KCTICLSEFEDCESVRRLP 587
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQELE 335
C H+FH+ CVDQWL CP+C+ ++E
Sbjct: 588 CMHLFHIDCVDQWLCTNKRCPICRVDIE 615
>gi|58332096|ref|NP_001011200.1| E3 ubiquitin-protein ligase RNF181 [Xenopus (Silurana) tropicalis]
gi|82195685|sp|Q5M974.1|RN181_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF181; AltName:
Full=RING finger protein 181
gi|56541182|gb|AAH87570.1| ring finger protein 181 [Xenopus (Silurana) tropicalis]
gi|89268984|emb|CAJ81968.1| novel protein containing RING finger [Xenopus (Silurana)
tropicalis]
Length = 156
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/93 (37%), Positives = 51/93 (54%), Gaps = 5/93 (5%)
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP--ECCICLAKYKEKE 301
G ++++GA D D RLP K+V +L P D +C +CL +++E E
Sbjct: 34 GMDIDLGALDFTEWD---QRLPPPAAKKVVESLPKVTVTPEQADAALKCPVCLLEFEEGE 90
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
VR+LPC H+FH C+ WL + CPLC+ EL
Sbjct: 91 TVRQLPCEHLFHSSCILPWLGKTNSCPLCRHEL 123
>gi|328872195|gb|EGG20562.1| hypothetical protein DFA_00423 [Dictyostelium fasciculatum]
Length = 675
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 50/93 (53%), Gaps = 18/93 (19%)
Query: 247 MNMGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 303
++ +KGA +I +LP+ + K ++D+ CCICL + + + V
Sbjct: 597 LDENVNNKGAQATEIKQLPTHKIKTGSKIDT---------------CCICLCEMEIGQNV 641
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
+ LPC+H FH +C+D WL+I CP+ KQ + +
Sbjct: 642 KSLPCTHYFHTECIDNWLKINKICPIDKQSINK 674
>gi|356522660|ref|XP_003529964.1| PREDICTED: putative RING-H2 finger protein ATL50-like [Glycine max]
Length = 187
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 286 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
E +C ICLA+YKEKE +R +P C H FHL C+D WLR S CP+C+ L+
Sbjct: 81 ETTQCVICLAEYKEKELLRIIPKCGHTFHLSCIDMWLRKQSTCPVCRLSLQ 131
>gi|125527751|gb|EAY75865.1| hypothetical protein OsI_03783 [Oryza sativa Indica Group]
Length = 238
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 7/76 (9%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 319
I+ LP+ Y +V AG + EC ICL +E + VR LP C H+FH+ C+D+
Sbjct: 94 IAALPTAAYGKVAGGDAAGGTT------ECAICLGAMQEADAVRVLPACRHVFHVACIDK 147
Query: 320 WLRILSCCPLCKQELE 335
WL S CP+C+ +E
Sbjct: 148 WLASSSSCPVCRAGVE 163
>gi|334349289|ref|XP_001362311.2| PREDICTED: hypothetical protein LOC100009881 isoform 2 [Monodelphis
domestica]
Length = 349
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 258 DDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
DDQ P K NL N ++ C +C+ +Y E ++RKLPCSH +H+ C+
Sbjct: 267 DDQ----PRGLTKEQIDNLAMRNFGESDALKTCSVCITEYTEGNKLRKLPCSHEYHVHCI 322
Query: 318 DQWLRILSCCPLCKQ 332
D+WL S CP+C++
Sbjct: 323 DRWLSENSTCPICRR 337
>gi|118359792|ref|XP_001013134.1| RING finger related protein [Tetrahymena thermophila]
gi|89294901|gb|EAR92889.1| RING finger related protein [Tetrahymena thermophila SB210]
Length = 383
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 47/83 (56%), Gaps = 8/83 (9%)
Query: 256 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCS--HMFH 313
A+++ I RL +YK + N++ + ECCICL Y+ + + LPCS H +H
Sbjct: 292 ANNEIIKRLQPQKYK------DKINNSEFDTQKECCICLVDYQSDDLIISLPCSKLHHYH 345
Query: 314 LKCVDQWLRILSCCPLCKQELER 336
CV +WL I CP+CK+ LE+
Sbjct: 346 YDCVVKWLNISGVCPICKKPLEQ 368
>gi|226530491|ref|NP_001148026.1| RING-H2 finger protein ATL2K [Zea mays]
gi|195615316|gb|ACG29488.1| RING-H2 finger protein ATL2K [Zea mays]
gi|414880463|tpg|DAA57594.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 241
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 46/84 (54%), Gaps = 9/84 (10%)
Query: 254 KGASDDQ-ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
KG D I+ LP+ Y+ + AG+ EC ICL ++ E VR LP C H+
Sbjct: 87 KGGLDPAAIAALPTTLYRNDAAEAGAGSD-------ECTICLGAVQDGEVVRALPACGHV 139
Query: 312 FHLKCVDQWLRILSCCPLCKQELE 335
FH+ CVD WL S CP+C+ E+E
Sbjct: 140 FHVPCVDTWLASSSSCPVCRAEVE 163
>gi|429962863|gb|ELA42407.1| hypothetical protein VICG_00506 [Vittaforma corneae ATCC 50505]
Length = 248
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 105/251 (41%), Gaps = 50/251 (19%)
Query: 86 TWMTLELLALLVQISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSLLLLYGRYRQLYA 145
T + +L+ +I F L I++ + P+++++ GY + C + + + +
Sbjct: 28 TLVVTDLIFHGARILFSIFVLYITRNDIVEEPLKVFLTGYILLCAAKAITFFSKNSAFFH 87
Query: 146 SQVDGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFDSRFGSFQRAP 205
LP+ E+ + + FS+L+ C LF W+++G W+ S Q P
Sbjct: 88 IN----RLPEYEESNNGL-AVFSNLVEGCN----LF---WYILGYHWLQQCENCS-QTHP 134
Query: 206 NLHVLCISLLAWNALSYSFPFLLFLLLCCCV----PLISSVLGYNMNMGAADKGASDDQI 261
L+ + L +SY P + +LL V P + +V+ +N
Sbjct: 135 LLYYTTVIWLILGFVSYILPLVAIVLLLILVSYVKPKLKTVVFHN--------------- 179
Query: 262 SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL 321
DS++ GNS C IC Y V+ LPC H FH +CVD+WL
Sbjct: 180 -----------DSDIHDGNS-------RCVICYENYVPGSLVKFLPCDHHFHCECVDEWL 221
Query: 322 RILSCCPLCKQ 332
I CPLCK+
Sbjct: 222 NIRDTCPLCKK 232
>gi|217072448|gb|ACJ84584.1| unknown [Medicago truncatula]
Length = 187
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/80 (42%), Positives = 47/80 (58%), Gaps = 9/80 (11%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
D G I +P+ ++ N EA + A ED +C ICLA YKE+E +R +P C H
Sbjct: 61 DPGTEPVLIEAIPTLKF-----NQEAFS---AIEDTQCVICLADYKEREILRIMPKCGHT 112
Query: 312 FHLKCVDQWLRILSCCPLCK 331
FHL C+D WL+ S CP+C+
Sbjct: 113 FHLSCIDIWLKKQSTCPVCR 132
>gi|226490958|ref|NP_001141061.1| uncharacterized protein LOC100273142 [Zea mays]
gi|194702454|gb|ACF85311.1| unknown [Zea mays]
gi|413939328|gb|AFW73879.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 510
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 11/77 (14%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANED--PECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
+ LP YK++++ P D +C ICL +Y++ +++R LPC H FHL+CVD
Sbjct: 437 VDSLPCKSYKKLET--------PQCSDDMEQCHICLTEYEDGDQIRTLPCKHEFHLQCVD 488
Query: 319 QWLR-ILSCCPLCKQEL 334
+WL+ I CPLC+ ++
Sbjct: 489 KWLKEIHRVCPLCRGDV 505
>gi|225453756|ref|XP_002270058.1| PREDICTED: RING-H2 finger protein ATL7 [Vitis vinifera]
gi|296089077|emb|CBI38780.3| unnamed protein product [Vitis vinifera]
Length = 201
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 9/76 (11%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 319
++ +P+ ++ R EA +S ED +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 65 VAAIPTMKFNR-----EAFSSV---EDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDV 116
Query: 320 WLRILSCCPLCKQELE 335
WLR S CP+C+ L+
Sbjct: 117 WLRKQSTCPVCRLSLQ 132
>gi|413953138|gb|AFW85787.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 187
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 58/117 (49%), Gaps = 14/117 (11%)
Query: 220 LSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS-WRYKRVDSNLEA 278
+S SFPFL L +P+ + L + G A+ G IS LP+ + YKR
Sbjct: 74 ISRSFPFLH--LSTRALPVAAGRLFWPA--GTAEPGMDAAAISSLPAAFGYKR------- 122
Query: 279 GNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
PA +C ICL E VR+LP C H+FH C+DQWLR + C LC+ +
Sbjct: 123 -EHHPATGWAQCAICLGLVAIGEAVRRLPTCGHLFHAGCIDQWLRAHATCSLCRAAV 178
>gi|326525505|dbj|BAJ88799.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 171
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 7/86 (8%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G SDD IS L +R K N S+ N D EC IC + YK +E++ +LPC
Sbjct: 91 VGTQSRGLSDDLISYLEPFRNK---CNF---FSSKKNTD-ECVICKSNYKSREKLIRLPC 143
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
SH +H C+ +WL+I CP+C +E+
Sbjct: 144 SHCYHAGCITRWLKINKACPVCNEEV 169
>gi|345321013|ref|XP_001513994.2| PREDICTED: E3 ubiquitin-protein ligase RNF181-like [Ornithorhynchus
anatinus]
Length = 154
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 50/91 (54%), Gaps = 3/91 (3%)
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 303
G ++++G+AD D RLP KR+ NL A +C +CL +++E++
Sbjct: 34 GMDIDLGSADLTDWD---HRLPPPAAKRIVQNLPTAVITEAQAGLKCPVCLLEFEEEQTA 90
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
R +PC H+FH C+ WL + CPLC+ EL
Sbjct: 91 RAMPCQHLFHANCILPWLGKTNSCPLCRHEL 121
>gi|255081262|ref|XP_002507853.1| predicted protein [Micromonas sp. RCC299]
gi|226523129|gb|ACO69111.1| predicted protein [Micromonas sp. RCC299]
Length = 404
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 47/94 (50%), Gaps = 9/94 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE--------CCICLAKYKEK 300
+GA G S D I +P+W Y + +P PE C +CL ++
Sbjct: 304 LGAVSAGVSADVIDAMPAWTYHSPTPGAMDPSGSPGG-GPEHECSQVPCCSVCLCDAEDG 362
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+ +R LPC H++H C+D+WL S CP+CK ++
Sbjct: 363 DAMRTLPCMHVYHADCIDKWLGEHSTCPICKHDV 396
>gi|302821069|ref|XP_002992199.1| hypothetical protein SELMODRAFT_186618 [Selaginella moellendorffii]
gi|300139966|gb|EFJ06696.1| hypothetical protein SELMODRAFT_186618 [Selaginella moellendorffii]
Length = 160
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 58/117 (49%), Gaps = 6/117 (5%)
Query: 219 ALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR---YKRVDSN 275
L Y + +L+ +++S + + D+ + IS L Y R+
Sbjct: 19 GLGYGIAIAVGILVLVSTIMLASYVCVRQQSSSRDRSDGEWTISGLDQVTLESYPRI--V 76
Query: 276 LEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
A P +D C ICLA Y+E E +R LP C H+FH++C+D W+R+ + CP+C+
Sbjct: 77 FSAQQPLPHPQDTACAICLADYREAEMLRVLPDCRHVFHVQCIDSWMRLQATCPMCR 133
>gi|359484061|ref|XP_002270577.2| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related [Vitis vinifera]
Length = 452
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D I+ LPS YK SN E N + C IC Y++ E + L C
Sbjct: 371 IGTESRGLSSDTIASLPSVTYK-AQSNQEGSNDS-------CVICRLDYEDGETLTVLSC 422
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H +C++ WL+I CP+C E+
Sbjct: 423 KHSYHSECINNWLQINKVCPICSTEV 448
>gi|147781800|emb|CAN65442.1| hypothetical protein VITISV_011419 [Vitis vinifera]
Length = 224
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 48/76 (63%), Gaps = 9/76 (11%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 319
++ +P+ ++ R EA +S ED +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 88 VAAIPTMKFNR-----EAFSSV---EDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDV 139
Query: 320 WLRILSCCPLCKQELE 335
WLR S CP+C+ L+
Sbjct: 140 WLRKQSTCPVCRLSLQ 155
>gi|255571091|ref|XP_002526496.1| ring finger protein, putative [Ricinus communis]
gi|223534171|gb|EEF35887.1| ring finger protein, putative [Ricinus communis]
Length = 484
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 35/47 (74%), Gaps = 1/47 (2%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 334
+C ICL Y+E +E+R LPCSH +H+ CVD+WL+ I CPLC+ ++
Sbjct: 421 QCHICLVDYEEGDEIRVLPCSHEYHVSCVDKWLKEIHGVCPLCRGDV 467
>gi|403372055|gb|EJY85916.1| Ring finger protein, putative [Oxytricha trifallax]
Length = 447
Score = 64.7 bits (156), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 52/91 (57%), Gaps = 1/91 (1%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVR 304
N++ K S D I LP ++K+ + +A N+ +E+ +C IC KY E E+++
Sbjct: 355 NLDQKINQKPLSSDMIDSLPETKFKKNEHAHQANNNGVQDEEETKCSICQCKYLEGEDLK 414
Query: 305 KLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
L C H +H +C+ +WL + CP+C+ E++
Sbjct: 415 TLTCFHKYHKECISEWLHRQNFCPICRTEIK 445
>gi|255541456|ref|XP_002511792.1| ring finger protein, putative [Ricinus communis]
gi|223548972|gb|EEF50461.1| ring finger protein, putative [Ricinus communis]
Length = 201
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 44/72 (61%), Gaps = 9/72 (12%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 319
++ +P+ ++ R + A ED +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 66 VAAIPTMKFNR--------EAFTAVEDAQCSICLGEYQEKEVLRIMPKCGHNFHLSCIDV 117
Query: 320 WLRILSCCPLCK 331
WLR S CP+C+
Sbjct: 118 WLRKQSTCPVCR 129
>gi|255579580|ref|XP_002530631.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
gi|223529804|gb|EEF31739.1| RING-H2 finger protein ATL4M, putative [Ricinus communis]
Length = 235
Score = 64.7 bits (156), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 8/88 (9%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+ G A KG + D + ++P + ++ ++A + E C +CL ++ E VR LP
Sbjct: 155 DTGGA-KGLTGDTVEKIPKIKITS-NNTIDA-----SGEKVACSVCLQDFQVGETVRSLP 207
Query: 308 -CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C HMFHL C+D+WL + CPLC+++L
Sbjct: 208 HCHHMFHLPCIDKWLLRHASCPLCRRDL 235
>gi|28573149|ref|NP_731367.2| murashka, isoform C [Drosophila melanogaster]
gi|28381204|gb|AAF54394.4| murashka, isoform C [Drosophila melanogaster]
gi|317008637|gb|ADU79246.1| GH10160p [Drosophila melanogaster]
Length = 1173
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 1047 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 1097
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 1098 EFHAKCVDKWLRSNRTCPICR 1118
>gi|328868880|gb|EGG17258.1| phosphatidylinositol transfer protein [Dictyostelium fasciculatum]
Length = 587
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 53/92 (57%), Gaps = 8/92 (8%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLE---AGNSAPANEDPECCICLAKYKEKEE 302
N+N GAA K ++I LP K D+++E + + + + C ICL +++
Sbjct: 500 NLNYGAAKK----EEIESLPMHTIKS-DNDIEHLFSDTQSSSQQPTSCSICLDEFEIDNH 554
Query: 303 VRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
++ LPC H FH +C+D+WL+I + CP+CK L
Sbjct: 555 LKTLPCLHHFHSECIDKWLKIKANCPICKSSL 586
>gi|226495451|ref|NP_001149296.1| LOC100282919 [Zea mays]
gi|195626142|gb|ACG34901.1| protein binding protein [Zea mays]
Length = 323
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 51/86 (59%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G ++G S D ++ LPS YK +++ GN+ +C IC + ++ E + LPC
Sbjct: 238 VGTENRGLSADALASLPSVTYKM--QSVQDGNTE------QCVICRVELEDGESLIALPC 289
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H++H +C++QWL+I CP+C E+
Sbjct: 290 KHLYHPECINQWLQINKVCPMCSAEV 315
>gi|431896576|gb|ELK05988.1| RING finger protein 115 [Pteropus alecto]
Length = 305
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 215 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YKRV 272
L+W+ L +S P +++ +LG N G A ++I+ LP+ ++V
Sbjct: 166 LSWSGLLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQEQV 223
Query: 273 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
D+ LE C +C Y EEVR+LPC+H FH C+ WL + CP+C++
Sbjct: 224 DTGLE------------CSVCKEDYTVGEEVRQLPCNHFFHSSCIVPWLELHDTCPICRK 271
Query: 333 EL 334
L
Sbjct: 272 SL 273
>gi|395859921|ref|XP_003802274.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Otolemur garnettii]
Length = 619
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 565 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 607
>gi|414886479|tpg|DAA62493.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 322
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G ++G S D + LPS YK +++ GN+ +C IC + +E E + LPC
Sbjct: 237 VGTENRGLSADTLGSLPSVTYKL--QHVQDGNTE------QCVICRVELEEGESLIALPC 288
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H++H +C++QWL+I CP+C E+
Sbjct: 289 KHLYHPECINQWLQINKVCPMCSAEV 314
>gi|224146616|ref|XP_002326072.1| predicted protein [Populus trichocarpa]
gi|222862947|gb|EEF00454.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 289 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+C ICL ++ E E+VR LP CSH FH+KC+D+WL + S CPLC+Q L
Sbjct: 115 DCTICLGEFSEGEKVRVLPKCSHGFHVKCIDKWLLLHSSCPLCRQTL 161
>gi|226498638|ref|NP_001150748.1| protein binding protein [Zea mays]
gi|195641466|gb|ACG40201.1| protein binding protein [Zea mays]
Length = 322
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 50/86 (58%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G ++G S D + LPS YK +++ GN+ +C IC + +E E + LPC
Sbjct: 237 VGTENRGLSADTLGSLPSVTYKL--QHVQDGNTE------QCVICRVELEEGESLIALPC 288
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H++H +C++QWL+I CP+C E+
Sbjct: 289 KHLYHPECINQWLQINKVCPMCSAEV 314
>gi|33411670|dbj|BAC81441.1| XRnf12 [Xenopus laevis]
Length = 616
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 562 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 604
>gi|237830951|ref|XP_002364773.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma gondii
ME49]
gi|211962437|gb|EEA97632.1| zinc finger (C3HC4 RING finger) protein, putative [Toxoplasma gondii
ME49]
gi|221507652|gb|EEE33256.1| zinc finger (C3HC4 RING finger) protein [Toxoplasma gondii VEG]
Length = 1542
Score = 64.3 bits (155), Expect = 7e-08, Method: Composition-based stats.
Identities = 23/51 (45%), Positives = 34/51 (66%)
Query: 284 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
++E C IC Y+ +E+R+LPC+H+FH C+D WLR CP+CK +L
Sbjct: 1487 SDEAKRCSICFEDYEHADELRRLPCTHVFHKNCIDVWLRRSFVCPICKHDL 1537
>gi|148223081|ref|NP_001082725.1| E3 ubiquitin-protein ligase RNF12-A [Xenopus laevis]
gi|82198038|sp|Q641J8.1|RF12A_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-A; AltName:
Full=RING finger protein 12-A; AltName: Full=XRnf12
gi|51950095|gb|AAH82339.1| XRnf12 protein [Xenopus laevis]
Length = 622
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 610
>gi|168035662|ref|XP_001770328.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162678359|gb|EDQ64818.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 385
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 49/108 (45%), Gaps = 31/108 (28%)
Query: 255 GASDDQISRLPSWRYKR----------------------------VDSNLEAGNSAPAN- 285
G SD ISRLP YK VD++LE+ + N
Sbjct: 260 GMSDTDISRLPVRMYKGSVQKPAADQSQPSSKGEDPPCEEVVVDIVDASLESVDEGKQNV 319
Query: 286 --EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
E+ C +CL + + E +R LPC H FH C+DQWL+ + CP+CK
Sbjct: 320 VEEELTCSVCLEQVVDGEIIRTLPCVHQFHAACIDQWLKQQATCPVCK 367
>gi|115495409|ref|NP_001070092.1| RING finger protein 44 [Danio rerio]
gi|123908298|sp|Q08CG8.1|RNF44_DANRE RecName: Full=RING finger protein 44
gi|115313066|gb|AAI24247.1| Zgc:153103 [Danio rerio]
Length = 448
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ NLE S E C +C + ++ ++ +R LPC+H
Sbjct: 366 AKPRGLTKADIEQLPSYRF-----NLENHQS----EQTLCVVCFSDFESRQLLRVLPCNH 416
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WL+ CP+C+
Sbjct: 417 EFHAKCVDKWLKTNRTCPICR 437
>gi|449268981|gb|EMC79795.1| E3 ubiquitin-protein ligase rnf12-A [Columba livia]
Length = 595
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 583
>gi|357137455|ref|XP_003570316.1| PREDICTED: uncharacterized protein LOC100833892 isoform 1
[Brachypodium distachyon]
Length = 518
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
++ LP YK++++ A + D E C ICL +Y++ +++R LPC H FHL+CVD+
Sbjct: 444 VNSLPCKSYKKLET-------AQCSADLEQCHICLTEYEDGDQIRSLPCKHEFHLQCVDK 496
Query: 320 WLR-ILSCCPLCKQEL 334
WL+ I CPLC+ ++
Sbjct: 497 WLKEIHRVCPLCRGDV 512
>gi|167017568|gb|ABZ04755.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|167017572|gb|ABZ04757.1| At1g04360 [Arabidopsis thaliana]
gi|167017578|gb|ABZ04760.1| At1g04360 [Arabidopsis thaliana]
gi|167017582|gb|ABZ04762.1| At1g04360 [Arabidopsis thaliana]
gi|167017592|gb|ABZ04767.1| At1g04360 [Arabidopsis thaliana]
gi|167017594|gb|ABZ04768.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|431901142|gb|ELK08267.1| E3 ubiquitin-protein ligase RLIM [Pteropus alecto]
Length = 607
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 553 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 595
>gi|353440930|gb|AEQ94064.1| MIP32849p1 [Drosophila melanogaster]
Length = 333
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 207 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 257
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 258 EFHAKCVDKWLRSNRTCPICR 278
>gi|348512116|ref|XP_003443589.1| PREDICTED: E3 ubiquitin-protein ligase RNF6-like [Oreochromis
niloticus]
Length = 772
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 46/81 (56%), Gaps = 8/81 (9%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+G + +QI L + Y + E G + C +C+ +Y + ++R+LPCSH FH
Sbjct: 694 RGLTKEQIDNLSTRTYGQASLEGEIGRA--------CSVCINEYVQGNKLRRLPCSHEFH 745
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
+ C+D+WL + CP+C+Q +
Sbjct: 746 VHCIDRWLSENNTCPICRQPI 766
>gi|116782843|gb|ABK22685.1| unknown [Picea sitchensis]
Length = 291
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 35/62 (56%)
Query: 270 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPL 329
K+ DS G+ E+ C +CL + E E VR LPC H FH C+D WLR + CP+
Sbjct: 210 KKTDSENIEGSGKGREEELTCSVCLEQVNEGELVRSLPCLHQFHASCIDPWLRQQATCPV 269
Query: 330 CK 331
CK
Sbjct: 270 CK 271
>gi|410988853|ref|XP_004000691.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Felis catus]
Length = 621
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 567 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 609
>gi|168693457|ref|NP_001108244.1| E3 ubiquitin-protein ligase RNF12-B [Xenopus laevis]
gi|82208071|sp|Q7T037.1|RF12B_XENLA RecName: Full=E3 ubiquitin-protein ligase RNF12-B; AltName:
Full=RING finger protein 12-B; AltName: Full=XRnf12B
gi|33411672|dbj|BAC81442.1| XRnf12B [Xenopus laevis]
Length = 757
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 703 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 745
>gi|444518192|gb|ELV12009.1| E3 ubiquitin-protein ligase RLIM [Tupaia chinensis]
Length = 558
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 504 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 546
>gi|345807549|ref|XP_859444.2| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 3 [Canis lupus
familiaris]
Length = 625
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 613
>gi|167017570|gb|ABZ04756.1| At1g04360 [Arabidopsis thaliana]
gi|167017574|gb|ABZ04758.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|332025030|gb|EGI65217.1| E3 ubiquitin-protein ligase arkadia-C [Acromyrmex echinatior]
Length = 687
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 51/82 (62%), Gaps = 6/82 (7%)
Query: 255 GASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
GA+ + I S +YKRV +E G A +C ICL+++++ E VR+LPC H+FH
Sbjct: 599 GATQESIESHTFPHKYKRV-KKVENGEDAIE----KCTICLSEFEDCERVRRLPCMHLFH 653
Query: 314 LKCVDQWLRILSCCPLCKQELE 335
+ CVD+WL CP+C+ ++E
Sbjct: 654 IDCVDRWLCTNKRCPICRVDIE 675
>gi|297811909|ref|XP_002873838.1| hypothetical protein ARALYDRAFT_488627 [Arabidopsis lyrata subsp.
lyrata]
gi|297319675|gb|EFH50097.1| hypothetical protein ARALYDRAFT_488627 [Arabidopsis lyrata subsp.
lyrata]
Length = 362
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP- 307
+ G +D I + ++YK+ D ++ +C +CL++++E E +R LP
Sbjct: 108 ISTTGDGLNDSMIKSITVYKYKKGDGFVDG---------SDCSVCLSEFEENESLRLLPK 158
Query: 308 CSHMFHLKCVDQWLRILSCCPLCK 331
C+H FHL C+D WL+ S CPLC+
Sbjct: 159 CNHAFHLPCIDTWLKSHSNCPLCR 182
>gi|224096674|ref|XP_002310694.1| predicted protein [Populus trichocarpa]
gi|222853597|gb|EEE91144.1| predicted protein [Populus trichocarpa]
Length = 193
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 55/109 (50%), Gaps = 4/109 (3%)
Query: 227 LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 286
L+ + C C V G + + A+KG + LP + Y D + E G +
Sbjct: 45 LILMARCACT---RRVTGGSPSSDKANKGVKKKNLQLLPRFSYSAGDGSGEGGGATTKFG 101
Query: 287 DPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
EC ICL ++ E +EVR LP C H FH+ C+D WLR S CP C+Q L
Sbjct: 102 STECAICLGEFVEGDEVRVLPQCGHSFHVVCIDTWLRSHSSCPSCRQIL 150
>gi|213626227|gb|AAI69999.1| XRnf12C protein [Xenopus laevis]
Length = 751
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 697 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 739
>gi|167017586|gb|ABZ04764.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|355716637|gb|AES05675.1| ring finger protein, LIM domain interacting [Mustela putorius furo]
Length = 625
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 613
>gi|357127645|ref|XP_003565489.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Brachypodium
distachyon]
Length = 161
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 41/81 (50%), Gaps = 1/81 (1%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
A G I+RLP + R + + A D C +CL +E E VR LP C H
Sbjct: 77 ASGGLDGATIARLPCFVAARRSRSQTTSGANDATTDHCCTVCLGAVEEGETVRALPFCRH 136
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH +CVD WLR+ CP+C+
Sbjct: 137 AFHARCVDAWLRLRPTCPVCR 157
>gi|242061886|ref|XP_002452232.1| hypothetical protein SORBIDRAFT_04g022150 [Sorghum bicolor]
gi|241932063|gb|EES05208.1| hypothetical protein SORBIDRAFT_04g022150 [Sorghum bicolor]
Length = 240
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
A GA + +P+ Y L+A P C ICLA+ + E VR LP C+H
Sbjct: 121 AQAGARRKALRAMPTLVYSPGMLPLQAAGGG----GPVCAICLAELEPGERVRVLPKCNH 176
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
FH++CVD+WL + S CP C+Q L
Sbjct: 177 GFHVRCVDRWLLVRSTCPTCRQPL 200
>gi|417403353|gb|JAA48484.1| Putative e3 ubiquitin-protein ligase rlim [Desmodus rotundus]
Length = 617
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 563 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 605
>gi|301787517|ref|XP_002929173.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Ailuropoda
melanoleuca]
gi|281350879|gb|EFB26463.1| hypothetical protein PANDA_019274 [Ailuropoda melanoleuca]
Length = 625
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 571 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 613
>gi|167017590|gb|ABZ04766.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 144 VFHIDCIDIWLQGNANCPLCRTSV 167
>gi|395546427|ref|XP_003775089.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Sarcophilus harrisii]
Length = 618
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 564 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 606
>gi|301778327|ref|XP_002924579.1| PREDICTED: e3 ubiquitin-protein ligase RNF167-like [Ailuropoda
melanoleuca]
Length = 353
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 231 LLCCCVPLISSVLGY-NMNMGAA-----DKGASDDQISRLPSWRYKRVDSNLEAGNSAPA 284
LL C+ L + V+G + MGA + Q++RL + KR+ + +
Sbjct: 169 LLGYCLILFTGVVGLLILAMGAGLIARFIQHQKQLQMNRLTKEQLKRIPIH----DYQKG 224
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQELER 336
++ C ICLA+Y++ +++R LPC+H +H +CVD WL + CP+CKQ ++R
Sbjct: 225 DQYDVCAICLAEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVQR 277
>gi|148236424|ref|NP_001084194.1| XRnf12C protein [Xenopus laevis]
gi|33411674|dbj|BAC81443.1| XRnf12C [Xenopus laevis]
Length = 825
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 771 CSVCITEYTEGNKLRKLPCSHEYHIHCIDRWLSENSTCPICRR 813
>gi|311276513|ref|XP_003135236.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Sus scrofa]
gi|335306207|ref|XP_003360418.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Sus scrofa]
gi|350595776|ref|XP_003484178.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 623
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 569 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 611
>gi|167017576|gb|ABZ04759.1| At1g04360 [Arabidopsis thaliana]
gi|167017580|gb|ABZ04761.1| At1g04360 [Arabidopsis thaliana]
gi|167017584|gb|ABZ04763.1| At1g04360 [Arabidopsis thaliana]
gi|167017588|gb|ABZ04765.1| At1g04360 [Arabidopsis thaliana]
Length = 360
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
+FH+ C+D WL+ + CPLC+
Sbjct: 144 VFHIDCIDIWLQGNANCPLCR 164
>gi|15219716|ref|NP_171931.1| RING-H2 finger protein ATL1 [Arabidopsis thaliana]
gi|68565098|sp|P93823.1|ATL1_ARATH RecName: Full=RING-H2 finger protein ATL1
gi|1903359|gb|AAB70441.1| F19P19.21 [Arabidopsis thaliana]
gi|28393753|gb|AAO42287.1| unknown protein [Arabidopsis thaliana]
gi|29824325|gb|AAP04123.1| unknown protein [Arabidopsis thaliana]
gi|332189567|gb|AEE27688.1| RING-H2 finger protein ATL1 [Arabidopsis thaliana]
Length = 381
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 50/81 (61%), Gaps = 3/81 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 98 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 155
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
+FH+ C+D WL+ + CPLC+
Sbjct: 156 VFHIDCIDIWLQGNANCPLCR 176
>gi|297848660|ref|XP_002892211.1| hypothetical protein ARALYDRAFT_887598 [Arabidopsis lyrata subsp.
lyrata]
gi|297338053|gb|EFH68470.1| hypothetical protein ARALYDRAFT_887598 [Arabidopsis lyrata subsp.
lyrata]
Length = 382
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG EC +CL +++E E++R +P C H
Sbjct: 98 VNRGLDESAIRAIPVFKFKKRD--VAAGEDDQNKNSQECSVCLNEFQEDEKLRIIPNCCH 155
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 156 VFHIDCIDIWLQGNANCPLCRTSV 179
>gi|357125304|ref|XP_003564334.1| PREDICTED: uncharacterized protein LOC100841715 [Brachypodium
distachyon]
Length = 248
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
++G +G SD+ +S L W+YK + S N +C ICL+ ++ +E + LP
Sbjct: 162 SVGNESRGLSDELMSFLVPWKYK----DRSGFFSRKTNNLDDCSICLSAFRNRERLITLP 217
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL+I CP+CK E+
Sbjct: 218 CKHNYHAGCVTKWLKIDKTCPVCKYEV 244
>gi|149757525|ref|XP_001505027.1| PREDICTED: e3 ubiquitin-protein ligase RLIM isoform 1 [Equus
caballus]
Length = 616
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 562 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 604
>gi|24645397|ref|NP_649902.2| murashka, isoform A [Drosophila melanogaster]
gi|24645399|ref|NP_731366.1| murashka, isoform B [Drosophila melanogaster]
gi|20151609|gb|AAM11164.1| LD30050p [Drosophila melanogaster]
gi|23170810|gb|AAN13432.1| murashka, isoform A [Drosophila melanogaster]
gi|23170811|gb|AAN13433.1| murashka, isoform B [Drosophila melanogaster]
gi|220947288|gb|ACL86187.1| mura-PA [synthetic construct]
gi|220956746|gb|ACL90916.1| mura-PA [synthetic construct]
Length = 868
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 742 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 792
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 793 EFHAKCVDKWLRSNRTCPICR 813
>gi|357137457|ref|XP_003570317.1| PREDICTED: uncharacterized protein LOC100833892 isoform 2
[Brachypodium distachyon]
Length = 517
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
++ LP YK++++ A + D E C ICL +Y++ +++R LPC H FHL+CVD+
Sbjct: 443 VNSLPCKSYKKLET-------AQCSADLEQCHICLTEYEDGDQIRSLPCKHEFHLQCVDK 495
Query: 320 WLR-ILSCCPLCKQEL 334
WL+ I CPLC+ ++
Sbjct: 496 WLKEIHRVCPLCRGDV 511
>gi|15227929|ref|NP_181765.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
gi|68565335|sp|Q9SLC3.1|ATL41_ARATH RecName: Full=E3 ubiquitin-protein ligase ATL41; AltName:
Full=RING-H2 finger protein ATL41
gi|4567308|gb|AAD23719.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|18491287|gb|AAL69468.1| At2g42360/MHK10.8 [Arabidopsis thaliana]
gi|70905063|gb|AAZ14057.1| At2g42360 [Arabidopsis thaliana]
gi|110736438|dbj|BAF00187.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|330255017|gb|AEC10111.1| E3 ubiquitin-protein ligase ATL41 [Arabidopsis thaliana]
Length = 236
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 9/83 (10%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G + I+ LP++ D G +A A E C +CL+ KE+++ R+LP C H+F
Sbjct: 80 RGLNPTVIASLPTFTVGATD-----GVAASATE---CAVCLSVLKEQDKARELPNCKHIF 131
Query: 313 HLKCVDQWLRILSCCPLCKQELE 335
H+ CVD WL S CP+C+ E+E
Sbjct: 132 HVDCVDTWLTTCSTCPVCRTEVE 154
>gi|34452684|ref|NP_057204.2| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|34452686|ref|NP_899196.1| E3 ubiquitin-protein ligase RLIM [Homo sapiens]
gi|426396456|ref|XP_004064457.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Gorilla
gorilla gorilla]
gi|426396458|ref|XP_004064458.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Gorilla
gorilla gorilla]
gi|143811451|sp|Q9NVW2.3|RLIM_HUMAN RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12;
AltName: Full=Renal carcinoma antigen NY-REN-43
gi|15426504|gb|AAH13357.1| Ring finger protein, LIM domain interacting [Homo sapiens]
gi|119619045|gb|EAW98639.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|119619046|gb|EAW98640.1| ring finger protein 12, isoform CRA_a [Homo sapiens]
gi|123993649|gb|ABM84426.1| ring finger protein 12 [synthetic construct]
gi|123999977|gb|ABM87497.1| ring finger protein 12 [synthetic construct]
gi|306921343|dbj|BAJ17751.1| ring finger protein, LIM domain interacting [synthetic construct]
Length = 624
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|332239684|ref|XP_003269028.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Nomascus
leucogenys]
Length = 622
Score = 64.3 bits (155), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 610
>gi|397507950|ref|XP_003824440.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
paniscus]
gi|397507952|ref|XP_003824441.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
paniscus]
Length = 622
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 568 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 610
>gi|297710376|ref|XP_002831863.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pongo
abelii]
Length = 624
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|114689178|ref|XP_001141975.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 1 [Pan
troglodytes]
gi|114689180|ref|XP_001142065.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Pan
troglodytes]
gi|410212840|gb|JAA03639.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410212842|gb|JAA03640.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259648|gb|JAA17790.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410259650|gb|JAA17791.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294556|gb|JAA25878.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410294558|gb|JAA25879.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337801|gb|JAA37847.1| ring finger protein, LIM domain interacting [Pan troglodytes]
gi|410337803|gb|JAA37848.1| ring finger protein, LIM domain interacting [Pan troglodytes]
Length = 620
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 566 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 608
>gi|449454614|ref|XP_004145049.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449472490|ref|XP_004153610.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
gi|449516541|ref|XP_004165305.1| PREDICTED: RING-H2 finger protein ATL54-like [Cucumis sativus]
Length = 203
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%), Gaps = 1/51 (1%)
Query: 286 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
ED +C ICL +Y+EKE +R +P C H FHL C+D WLR S CP+C+ L+
Sbjct: 85 EDAQCSICLGEYEEKEVLRIMPKCGHSFHLTCIDVWLRKQSTCPVCRLPLQ 135
>gi|432120081|gb|ELK38694.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 612
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 558 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 600
>gi|195330386|ref|XP_002031885.1| GM26248 [Drosophila sechellia]
gi|194120828|gb|EDW42871.1| GM26248 [Drosophila sechellia]
Length = 872
Score = 64.3 bits (155), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 746 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 796
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 797 EFHAKCVDKWLRSNRTCPICR 817
>gi|357137459|ref|XP_003570318.1| PREDICTED: uncharacterized protein LOC100833892 isoform 3
[Brachypodium distachyon]
Length = 510
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 49/76 (64%), Gaps = 9/76 (11%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
++ LP YK++++ A + D E C ICL +Y++ +++R LPC H FHL+CVD+
Sbjct: 436 VNSLPCKSYKKLET-------AQCSADLEQCHICLTEYEDGDQIRSLPCKHEFHLQCVDK 488
Query: 320 WLR-ILSCCPLCKQEL 334
WL+ I CPLC+ ++
Sbjct: 489 WLKEIHRVCPLCRGDV 504
>gi|354488554|ref|XP_003506433.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
gi|344243810|gb|EGV99913.1| E3 ubiquitin-protein ligase RLIM [Cricetulus griseus]
Length = 603
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 549 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 591
>gi|195499458|ref|XP_002096956.1| GE24768 [Drosophila yakuba]
gi|194183057|gb|EDW96668.1| GE24768 [Drosophila yakuba]
Length = 1040
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 914 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 964
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 965 EFHAKCVDKWLRSNRTCPICR 985
>gi|388453379|ref|NP_001253768.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|402910577|ref|XP_003917944.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Papio anubis]
gi|383412441|gb|AFH29434.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412443|gb|AFH29435.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412445|gb|AFH29436.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412447|gb|AFH29437.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412449|gb|AFH29438.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
gi|383412451|gb|AFH29439.1| E3 ubiquitin-protein ligase RLIM [Macaca mulatta]
Length = 624
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|7022528|dbj|BAA91632.1| unnamed protein product [Homo sapiens]
Length = 624
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|296235819|ref|XP_002763060.1| PREDICTED: E3 ubiquitin-protein ligase RLIM isoform 2 [Callithrix
jacchus]
Length = 620
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 566 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 608
>gi|224084028|ref|XP_002307200.1| predicted protein [Populus trichocarpa]
gi|118482335|gb|ABK93092.1| unknown [Populus trichocarpa]
gi|222856649|gb|EEE94196.1| predicted protein [Populus trichocarpa]
Length = 200
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 44/131 (33%), Positives = 61/131 (46%), Gaps = 21/131 (16%)
Query: 220 LSYSFPFLLFLLLC---CCVPLISS--------VLGYNMN----MGAADKGASDDQISRL 264
L F +L LLC C V LI++ V G + A+KG + L
Sbjct: 21 LESDFVVILAALLCALICVVGLIAAARCAWLRRVTGGASSGPPPQAKANKGVKKKNLQLL 80
Query: 265 PSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRI 323
P + Y + G + + EC ICL ++ E +EVR LP C H FH+ C+D+WL
Sbjct: 81 PRFTY-----SAGGGGATTSFGTTECAICLGEFVEGDEVRVLPQCGHGFHVGCIDKWLGS 135
Query: 324 LSCCPLCKQEL 334
S CP C+Q L
Sbjct: 136 HSSCPSCRQIL 146
>gi|399529262|gb|AFP44689.1| hypothetical protein [Eragrostis tef]
Length = 252
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 48/82 (58%), Gaps = 13/82 (15%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A+ +G + I R+P++RY+ + EC +CLA++++ E +R+LP C
Sbjct: 68 ASRRGLEEAAIRRIPTFRYQ------------SGSNKQECAVCLAEFRDGERLRQLPPCL 115
Query: 310 HMFHLKCVDQWLRILSCCPLCK 331
H FH+ C+D WL+ + CPLC+
Sbjct: 116 HAFHIDCIDAWLQSTANCPLCR 137
>gi|255562369|ref|XP_002522191.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
gi|223538562|gb|EEF40166.1| RING-H2 finger protein ATL1L, putative [Ricinus communis]
Length = 223
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 235 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 294
C L++S N + G A+ G + P+ Y D NL D EC ICL
Sbjct: 88 CSSLVASRSADNSSAGLANTGVKRKALKTFPTVNYS-TDLNLPG-------LDTECAICL 139
Query: 295 AKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+++ E VR LP C+H FH++C+D+WL S CP C+ L
Sbjct: 140 SEFTPGERVRLLPKCNHGFHVRCIDKWLSSHSSCPTCRHCL 180
>gi|195572254|ref|XP_002104111.1| GD20788 [Drosophila simulans]
gi|194200038|gb|EDX13614.1| GD20788 [Drosophila simulans]
Length = 877
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 751 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 801
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 802 EFHAKCVDKWLRSNRTCPICR 822
>gi|167017598|gb|ABZ04770.1| At1g04360 [Arabidopsis thaliana]
gi|167017608|gb|ABZ04775.1| At1g04360 [Arabidopsis thaliana]
gi|167017616|gb|ABZ04779.1| At1g04360 [Arabidopsis thaliana]
gi|167017640|gb|ABZ04791.1| At1g04360 [Arabidopsis thaliana]
gi|167017648|gb|ABZ04795.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 138 VFHIDCIDIWLQGNANCPLCRTSV 161
>gi|167017652|gb|ABZ04797.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 138 VFHIDCIDIWLQGNANCPLCRTSV 161
>gi|167017596|gb|ABZ04769.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 138 VFHIDCIDIWLQGNANCPLCRTSV 161
>gi|71031078|ref|XP_765181.1| hypothetical protein [Theileria parva strain Muguga]
gi|68352137|gb|EAN32898.1| hypothetical protein TP02_0615 [Theileria parva]
Length = 1138
Score = 63.9 bits (154), Expect = 9e-08, Method: Composition-based stats.
Identities = 21/42 (50%), Positives = 31/42 (73%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
C +CL +Y++ E+R+LPC+H FH C+D WLR + CP+CK
Sbjct: 172 CSVCLEEYQQGTEIRRLPCTHSFHKNCIDTWLRKSTICPICK 213
>gi|344282004|ref|XP_003412765.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Loxodonta
africana]
Length = 609
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 555 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 597
>gi|281342946|gb|EFB18530.1| hypothetical protein PANDA_013950 [Ailuropoda melanoleuca]
Length = 345
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 63/113 (55%), Gaps = 11/113 (9%)
Query: 231 LLCCCVPLISSVLGY-NMNMGAA-----DKGASDDQISRLPSWRYKRVDSNLEAGNSAPA 284
LL C+ L + V+G + MGA + Q++RL + KR+ + +
Sbjct: 169 LLGYCLILFTGVVGLLILAMGAGLIARFIQHQKQLQMNRLTKEQLKRIPIH----DYQKG 224
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQELER 336
++ C ICLA+Y++ +++R LPC+H +H +CVD WL + CP+CKQ ++R
Sbjct: 225 DQYDVCAICLAEYEDGDKLRVLPCAHAYHSRCVDPWLTQTRKTCPICKQPVQR 277
>gi|194703322|gb|ACF85745.1| unknown [Zea mays]
gi|413939275|gb|AFW73826.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 439
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLP-CSH 310
D G I LP + Y+ V +AP +DP +C +CL ++ +++R LP CSH
Sbjct: 91 DAGVDQAFIDALPVFLYRNVV------GAAPGGKDPFDCAVCLCEFAPDDQLRLLPKCSH 144
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
FHL+C+D WL S CPLC++ L
Sbjct: 145 AFHLECIDTWLLSHSTCPLCRRSL 168
>gi|212724133|ref|NP_001131833.1| uncharacterized protein LOC100193208 [Zea mays]
gi|194688576|gb|ACF78372.1| unknown [Zea mays]
gi|195627610|gb|ACG35635.1| protein binding protein [Zea mays]
gi|414866067|tpg|DAA44624.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
G S +S S ++ D G S P+ ++ C +CL + + +R LPC H FH+
Sbjct: 183 GPSQLSVSSTGSGNEEKQDGLKADGTSKPSEDELTCSVCLEQVTVGDLLRSLPCLHQFHV 242
Query: 315 KCVDQWLRILSCCPLCKQEL 334
C+D WLR CP+CK ++
Sbjct: 243 NCIDPWLRQQGTCPICKHQV 262
>gi|327288909|ref|XP_003229167.1| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like [Anolis
carolinensis]
Length = 586
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 532 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 574
>gi|326511373|dbj|BAJ87700.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 355
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 245 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 304
++++ A G I LP++ Y + S A + A +C +CL+++ + +R
Sbjct: 98 FHLHEDGAGPGLDQAAIDELPAFAYAEL-SGSGASSGAKGQRQFDCAVCLSEFAADDRLR 156
Query: 305 KLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
LP C H FH+ C+D WLR S CPLC+ L
Sbjct: 157 LLPLCGHAFHVACIDTWLRSSSTCPLCRTAL 187
>gi|194903083|ref|XP_001980810.1| GG17363 [Drosophila erecta]
gi|190652513|gb|EDV49768.1| GG17363 [Drosophila erecta]
Length = 887
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + ++I +LPS+++ N E N + C +C+ ++ ++ +R LPCSH
Sbjct: 761 AKPRGLTRNEIDQLPSYKF-----NPEVHNG----DQSSCVVCMCDFELRQLLRVLPCSH 811
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 812 EFHAKCVDKWLRSNRTCPICR 832
>gi|167017602|gb|ABZ04772.1| At1g04360 [Arabidopsis thaliana]
gi|167017606|gb|ABZ04774.1| At1g04360 [Arabidopsis thaliana]
gi|167017622|gb|ABZ04782.1| At1g04360 [Arabidopsis thaliana]
gi|167017642|gb|ABZ04792.1| At1g04360 [Arabidopsis thaliana]
gi|167017644|gb|ABZ04793.1| At1g04360 [Arabidopsis thaliana]
gi|167017650|gb|ABZ04796.1| At1g04360 [Arabidopsis thaliana]
gi|167017654|gb|ABZ04798.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 138 VFHIDCIDIWLQGNANCPLCRTSV 161
>gi|440910350|gb|ELR60156.1| E3 ubiquitin-protein ligase RLIM [Bos grunniens mutus]
Length = 611
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 557 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 599
>gi|167017604|gb|ABZ04773.1| At1g04360 [Arabidopsis thaliana]
gi|167017610|gb|ABZ04776.1| At1g04360 [Arabidopsis thaliana]
gi|167017612|gb|ABZ04777.1| At1g04360 [Arabidopsis thaliana]
gi|167017614|gb|ABZ04778.1| At1g04360 [Arabidopsis thaliana]
gi|167017620|gb|ABZ04781.1| At1g04360 [Arabidopsis thaliana]
gi|167017624|gb|ABZ04783.1| At1g04360 [Arabidopsis thaliana]
gi|167017628|gb|ABZ04785.1| At1g04360 [Arabidopsis thaliana]
gi|167017630|gb|ABZ04786.1| At1g04360 [Arabidopsis thaliana]
gi|167017634|gb|ABZ04788.1| At1g04360 [Arabidopsis thaliana]
gi|167017636|gb|ABZ04789.1| At1g04360 [Arabidopsis thaliana]
gi|167017646|gb|ABZ04794.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 138 VFHIDCIDIWLQGNANCPLCRTSV 161
>gi|326924458|ref|XP_003208444.1| PREDICTED: e3 ubiquitin-protein ligase RLIM-like [Meleagris
gallopavo]
Length = 593
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 539 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 581
>gi|226500884|ref|NP_001149313.1| RING-H2 finger protein ATL2C [Zea mays]
gi|195624254|gb|ACG33957.1| RING-H2 finger protein ATL2C [Zea mays]
Length = 433
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 48/84 (57%), Gaps = 8/84 (9%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLP-CSH 310
D G I LP + Y+ V +AP +DP +C +CL ++ +++R LP CSH
Sbjct: 87 DAGVDQAFIDALPVFLYRNVV------GAAPGGKDPFDCAVCLCEFSPDDQLRLLPKCSH 140
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
FHL+C+D WL S CPLC++ L
Sbjct: 141 AFHLECIDTWLLSHSTCPLCRRSL 164
>gi|62859463|ref|NP_001016091.1| E3 ubiquitin-protein ligase RNF12 [Xenopus (Silurana) tropicalis]
gi|123884087|sp|Q07G42.1|RNF12_XENTR RecName: Full=E3 ubiquitin-protein ligase RNF12; AltName: Full=RING
finger protein 12
gi|115530795|emb|CAL49424.1| ring finger protein 12 [Xenopus (Silurana) tropicalis]
Length = 639
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 627
>gi|300796903|ref|NP_001179251.1| E3 ubiquitin-protein ligase RLIM [Bos taurus]
gi|296470869|tpg|DAA12984.1| TPA: ring finger protein, LIM domain interacting-like isoform 1
[Bos taurus]
gi|296470870|tpg|DAA12985.1| TPA: ring finger protein, LIM domain interacting-like isoform 2
[Bos taurus]
Length = 611
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 557 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 599
>gi|213624561|gb|AAI71271.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
gi|213627806|gb|AAI71269.1| ring finger protein, LIM domain interacting [Xenopus (Silurana)
tropicalis]
Length = 639
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 585 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 627
>gi|218190408|gb|EEC72835.1| hypothetical protein OsI_06563 [Oryza sativa Indica Group]
Length = 194
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 8/81 (9%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 313
G + I LP+ Y+R L G DP C +CL + E VR+LP C H++H
Sbjct: 92 GLTAAAIDALPASEYER---PLGVGGGG----DPACSVCLEDVRGGETVRRLPACGHLYH 144
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
C+D WLR + CPLC+ +L
Sbjct: 145 AACIDAWLRSRTTCPLCRSDL 165
>gi|167017600|gb|ABZ04771.1| At1g04360 [Arabidopsis thaliana]
gi|167017626|gb|ABZ04784.1| At1g04360 [Arabidopsis thaliana]
gi|167017632|gb|ABZ04787.1| At1g04360 [Arabidopsis thaliana]
gi|167017638|gb|ABZ04790.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCH 137
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 138 VFHIDCIDIWLQGNANCPLCRTSV 161
>gi|426257257|ref|XP_004022246.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Ovis aries]
Length = 610
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 556 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 598
>gi|297833024|ref|XP_002884394.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297330234|gb|EFH60653.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 355
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 11/87 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
N +G D G + I + ++Y+++D +E+ +C +CL++++E E +R
Sbjct: 118 NPTIGGGD-GLDESLIKSITVYKYRKMDGFVESS---------DCSVCLSEFQENESLRL 167
Query: 306 LP-CSHMFHLKCVDQWLRILSCCPLCK 331
LP C+H FH+ C+D WL+ S CPLC+
Sbjct: 168 LPKCNHAFHVPCIDTWLKSHSNCPLCR 194
>gi|145491261|ref|XP_001431630.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398735|emb|CAK64232.1| unnamed protein product [Paramecium tetraurelia]
Length = 494
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 50/81 (61%), Gaps = 6/81 (7%)
Query: 256 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLPCSHMFHL 314
S+DQI++LP + ++E N +++ +C ICL Y+E + VR +PC H FH
Sbjct: 405 TSEDQINQLPIRQI-----SMEFINQHQNDDNHIKCMICLEDYEENQIVRTMPCWHYFHQ 459
Query: 315 KCVDQWLRILSCCPLCKQELE 335
+C+D+WL + CP+CK E++
Sbjct: 460 ECIDKWLHKSTLCPICKTEVD 480
>gi|10944884|emb|CAC14228.1| RING zinc finger LIM domain binding protein [Homo sapiens]
Length = 624
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 570 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 612
>gi|167017656|gb|ABZ04799.1| At1g04360-like protein [Arabidopsis lyrata]
Length = 361
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG EC +CL +++E E++R +P C H
Sbjct: 86 VNRGLDESAIRAIPVFKFKKRD--VAAGEDDQNKNSQECSVCLNEFQEDEKLRIIPNCCH 143
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 144 VFHIDCIDIWLQGNANCPLCRTSV 167
>gi|348538752|ref|XP_003456854.1| PREDICTED: E3 ubiquitin-protein ligase RNF167-like [Oreochromis
niloticus]
Length = 387
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 65/134 (48%), Gaps = 27/134 (20%)
Query: 216 AWNALSYSFPF------LLFLLLCCCVPLISSVL------GYNMNMGAADKGASDDQISR 263
A+ L FPF +LF + C + L+ SV+ Y + S +Q+ R
Sbjct: 157 AYVILRPEFPFPLSYYLILFAGVVCMIILVMSVIFIIRCVQYRKRL--RKNRLSKEQLKR 214
Query: 264 LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-R 322
+P ++ + D + C ICL +Y+E +++R LPCSH +H KCVD WL +
Sbjct: 215 IPIHKFSKGD------------DYDVCAICLDEYEEGDKLRVLPCSHAYHCKCVDPWLTQ 262
Query: 323 ILSCCPLCKQELER 336
CP+CKQ + R
Sbjct: 263 TKKTCPVCKQRVTR 276
>gi|26325250|dbj|BAC26379.1| unnamed protein product [Mus musculus]
Length = 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 588
>gi|66811790|ref|XP_640074.1| hypothetical protein DDB_G0282479 [Dictyostelium discoideum AX4]
gi|60468089|gb|EAL66099.1| hypothetical protein DDB_G0282479 [Dictyostelium discoideum AX4]
Length = 320
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 43/80 (53%), Gaps = 3/80 (3%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
GA +QI LP+ + D +LE + C ICL + + ++ LPC H +H
Sbjct: 241 GAKKEQIDLLPT-HFIDTDKDLEI--FLKGGDSKTCSICLDDFAVNDAIKTLPCIHHYHS 297
Query: 315 KCVDQWLRILSCCPLCKQEL 334
CV++WL+I S CP+CK +
Sbjct: 298 DCVEKWLKIKSVCPICKTSV 317
>gi|357472837|ref|XP_003606703.1| E3 ubiquitin-protein ligase [Medicago truncatula]
gi|355507758|gb|AES88900.1| E3 ubiquitin-protein ligase [Medicago truncatula]
Length = 268
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/97 (36%), Positives = 50/97 (51%), Gaps = 19/97 (19%)
Query: 254 KGASDDQISRLPSWRYKRVD--------SNLEA--------GNSAPANEDPE---CCICL 294
+ S+++I+ LP ++K + S+LEA G AN+ + C ICL
Sbjct: 151 RSMSEEEINALPIHKHKVTEGGPPGSPYSSLEAAEIKQDFKGEEGSANDQEDGLTCAICL 210
Query: 295 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ + E VR LPC H FH C+DQWLR CP+CK
Sbjct: 211 DQVQRGELVRSLPCLHQFHASCIDQWLRRKRTCPVCK 247
>gi|12850423|dbj|BAB28712.1| unnamed protein product [Mus musculus]
Length = 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 588
>gi|291411188|ref|XP_002721870.1| PREDICTED: ring finger protein, LIM domain interacting [Oryctolagus
cuniculus]
Length = 612
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 558 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 600
>gi|224098363|ref|XP_002199379.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Taeniopygia
guttata]
Length = 595
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 583
>gi|47078289|ref|NP_035406.3| E3 ubiquitin-protein ligase RLIM [Mus musculus]
gi|259016319|sp|Q9WTV7.2|RLIM_MOUSE RecName: Full=E3 ubiquitin-protein ligase RLIM; AltName: Full=LIM
domain-interacting RING finger protein; AltName:
Full=RING finger LIM domain-binding protein;
Short=R-LIM; AltName: Full=RING finger protein 12
gi|15277964|gb|AAH12960.1| Ring finger protein, LIM domain interacting [Mus musculus]
gi|148682142|gb|EDL14089.1| ring finger protein 12, isoform CRA_a [Mus musculus]
gi|148682143|gb|EDL14090.1| ring finger protein 12, isoform CRA_a [Mus musculus]
Length = 600
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 546 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 588
>gi|226499734|ref|NP_001148308.1| RING-H2 finger protein ATL2K [Zea mays]
gi|195617376|gb|ACG30518.1| RING-H2 finger protein ATL2K [Zea mays]
Length = 238
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 46/83 (55%), Gaps = 10/83 (12%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G ++ LP+ Y+ +AG A++ EC ICL +E E VR LP C H+F
Sbjct: 86 RGLDPAAVAALPTVLYR------DAGG---ADDGAECTICLGAVQEGELVRALPACGHVF 136
Query: 313 HLKCVDQWLRILSCCPLCKQELE 335
H+ CVD W S CP+C+ E+E
Sbjct: 137 HVPCVDTWFASSSSCPVCRAEVE 159
>gi|326680221|ref|XP_001923015.2| PREDICTED: hypothetical protein LOC561841 [Danio rerio]
Length = 474
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 52/96 (54%), Gaps = 12/96 (12%)
Query: 241 SVLGYNMNMGA--ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 298
++L + GA A S +I RLP K D AG + +C IC ++YK
Sbjct: 382 ALLAFEEQQGAVMAKNTLSKAEIERLP---IKTYDPTHSAGKT-------DCQICFSEYK 431
Query: 299 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
E +R LPC H +H+KC+D+WL+ + CP+C+ ++
Sbjct: 432 AGERLRMLPCLHDYHVKCIDRWLKENATCPICRADV 467
>gi|426229341|ref|XP_004008749.1| PREDICTED: RING finger protein 44 [Ovis aries]
Length = 432
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 49/86 (56%), Gaps = 9/86 (10%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+ AD G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LP
Sbjct: 347 GLTKADSGLTKADIEQLPSYRF-HPDSH--------QSEQTLCVVCFSDFEARQLLRVLP 397
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQE 333
C+H FH KCVD+WL+ CP+C+ +
Sbjct: 398 CNHEFHTKCVDKWLKANRTCPICRAD 423
>gi|403291724|ref|XP_003936919.1| PREDICTED: E3 ubiquitin-protein ligase RLIM [Saimiri boliviensis
boliviensis]
Length = 642
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 588 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 630
>gi|387019685|gb|AFJ51960.1| e3 ubiquitin-protein ligase RNF12-A-like [Crotalus adamanteus]
Length = 607
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 553 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 595
>gi|156407027|ref|XP_001641346.1| predicted protein [Nematostella vectensis]
gi|156228484|gb|EDO49283.1| predicted protein [Nematostella vectensis]
Length = 92
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/73 (35%), Positives = 42/73 (57%), Gaps = 8/73 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A KG + +I +LP++R S N+D C +CL ++EK+ VR LPC H
Sbjct: 19 AKPKGLTRAEIDQLPTYRV--------TAESKKQNDDARCVVCLVDFEEKQLVRTLPCLH 70
Query: 311 MFHLKCVDQWLRI 323
+H +C+D+WL++
Sbjct: 71 EYHTRCIDKWLKV 83
>gi|426236501|ref|XP_004012206.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Ovis aries]
Length = 680
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 230 LLLCCCVPLISSVLGYNMNMGAAD---KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 286
L+ +P++ + +N G D +G + +QI L + Y+ ++ E G +
Sbjct: 572 LVETGTLPILRLAHFFLLNEGDDDDPTRGLTKEQIDNLSTRNYEHSGADGEPGKA----- 626
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C++ Y ++R+LPC H FH+ C+D+WL CP+C+Q
Sbjct: 627 ---CSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSDNCTCPVCRQ 669
>gi|224144048|ref|XP_002325167.1| predicted protein [Populus trichocarpa]
gi|222866601|gb|EEF03732.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 50/80 (62%), Gaps = 7/80 (8%)
Query: 256 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLK 315
A + + P +K++D GN +ED +C ICLA+Y+E +++R LPC H +H+
Sbjct: 97 APESVVDSFPLKNHKKLDRV--KGN----DEDEQCYICLAEYEEGDKIRVLPCHHEYHMV 150
Query: 316 CVDQWLR-ILSCCPLCKQEL 334
CVD+WL+ I CPLC+ ++
Sbjct: 151 CVDKWLKEIHGVCPLCRGDV 170
>gi|405976812|gb|EKC41296.1| SWI/SNF-related matrix-associated actin-dependent regulator of
chromatin subfamily A member 5 [Crassostrea gigas]
Length = 1371
Score = 63.9 bits (154), Expect = 1e-07, Method: Composition-based stats.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 276 LEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
L+AG+ E +C +C+ YK + VR LPC H+FH CVD WL CP+CK ++
Sbjct: 202 LKAGDKELDPEFDQCAVCIEGYKTSDVVRTLPCKHIFHKSCVDPWLLDQRSCPMCKLDIL 261
Query: 336 R 336
R
Sbjct: 262 R 262
>gi|326489897|dbj|BAJ94022.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326505686|dbj|BAJ95514.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 706
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 242 VLGYNMNMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 300
+L +G G ++++I S L W+Y + LE PA CCIC Y +
Sbjct: 616 LLALGERIGHVSTGLTEEKIMSGLKQWKYLHIA--LEE----PATAIEPCCICQEDYTDG 669
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
E++ ++ C H FH +C+ QWL I + CP+CK+
Sbjct: 670 EDMGRVECGHYFHTECIKQWLVIKNTCPICKK 701
>gi|387019697|gb|AFJ51966.1| e3 ubiquitin-protein ligase RNF167-like [Crotalus adamanteus]
Length = 367
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/133 (31%), Positives = 65/133 (48%), Gaps = 18/133 (13%)
Query: 208 HVLCISLLAWNALSYSFPF---LLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRL 264
HV+ I + Y PF + ++ C LI + + M D+ S +Q+ ++
Sbjct: 160 HVVLIPEYIFPLGYYLIPFTGVVGVVIAVMCAILIVRCMQHRKRM-RKDR-LSKEQLKKI 217
Query: 265 PSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RI 323
P +YK+ D E C ICL +Y++ + +R LPCSH +H KCVD WL +
Sbjct: 218 PVHKYKKGD------------EYDVCAICLEEYEDGDRLRILPCSHAYHCKCVDPWLTQT 265
Query: 324 LSCCPLCKQELER 336
CP+CKQ + R
Sbjct: 266 KKTCPVCKQRVIR 278
>gi|67846064|ref|NP_001020063.1| E3 ubiquitin-protein ligase RLIM [Rattus norvegicus]
gi|392355774|ref|XP_003752129.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Rattus
norvegicus]
gi|66910661|gb|AAH97491.1| Ring finger protein 12 [Rattus norvegicus]
gi|149055585|gb|EDM07169.1| ring finger protein 12, isoform CRA_b [Rattus norvegicus]
Length = 603
Score = 63.9 bits (154), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 549 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 591
>gi|296085296|emb|CBI29028.3| unnamed protein product [Vitis vinifera]
Length = 308
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D I+ LPS YK SN E N + C IC Y++ E + L C
Sbjct: 227 IGTESRGLSSDTIASLPSVTYK-AQSNQEGSNDS-------CVICRLDYEDGETLTVLSC 278
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H +C++ WL+I CP+C E+
Sbjct: 279 KHSYHSECINNWLQINKVCPICSTEV 304
>gi|148232126|ref|NP_001091531.1| E3 ubiquitin-protein ligase RNF6 [Bos taurus]
gi|146186811|gb|AAI40556.1| RNF6 protein [Bos taurus]
gi|296481743|tpg|DAA23858.1| TPA: ring finger protein 6 [Bos taurus]
Length = 669
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 55/106 (51%), Gaps = 11/106 (10%)
Query: 230 LLLCCCVPLISSVLGYNMNMGAAD---KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 286
L+ +P++ + +N G D +G + +QI L + Y+ ++ E G +
Sbjct: 561 LVETGTLPILRLAHFFLLNEGDDDDPTRGLTKEQIDNLSTRNYEHSGADGEPGKA----- 615
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C++ Y ++R+LPC H FH+ C+D+WL CP+C+Q
Sbjct: 616 ---CSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQ 658
>gi|357129287|ref|XP_003566296.1| PREDICTED: uncharacterized protein LOC100838775 [Brachypodium
distachyon]
Length = 690
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 284 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 334
A+E +C ICL +Y+E + VR LPC+H FHL CVD+WL+ I CPLC+ ++
Sbjct: 627 ADEAAQCYICLVEYEEGDCVRVLPCNHEFHLTCVDKWLKEIHRVCPLCRGDV 678
>gi|242051609|ref|XP_002454950.1| hypothetical protein SORBIDRAFT_03g001980 [Sorghum bicolor]
gi|241926925|gb|EES00070.1| hypothetical protein SORBIDRAFT_03g001980 [Sorghum bicolor]
Length = 178
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/81 (40%), Positives = 46/81 (56%), Gaps = 13/81 (16%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
D G S D I+ LP++ + G APA + C +CL + + E+VR+LP C+H
Sbjct: 72 GDHGMSADAIAALPTFVH---------GAEAPALD---CPVCLGQVEAGEKVRRLPKCAH 119
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH CVD WLR S CP+C+
Sbjct: 120 SFHADCVDAWLRAHSTCPMCR 140
>gi|125562449|gb|EAZ07897.1| hypothetical protein OsI_30152 [Oryza sativa Indica Group]
Length = 300
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 249 MGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G +G S D ++ LPS Y+ + D N+E +C IC +++E E +
Sbjct: 215 VGTESRGLSADTLASLPSITYRAQDKQDGNME-----------QCVICRVEFEEGESLVA 263
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
LPC H +H +C++QWL++ CP+C E+
Sbjct: 264 LPCKHSYHSECINQWLQLNKVCPMCSAEV 292
>gi|224028865|gb|ACN33508.1| unknown [Zea mays]
gi|413952408|gb|AFW85057.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 237
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 45/83 (54%), Gaps = 10/83 (12%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G ++ LP+ Y+ ++ A++ EC ICL +E E VR LP C H+F
Sbjct: 86 RGLDPAAVAALPTVLYR---------DAGGADDGAECTICLGAVQEGELVRALPACGHVF 136
Query: 313 HLKCVDQWLRILSCCPLCKQELE 335
H+ CVD W S CP+C+ E+E
Sbjct: 137 HVPCVDTWFASSSSCPVCRAEVE 159
>gi|219886093|gb|ACL53421.1| unknown [Zea mays]
Length = 374
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 200 GLYLTDAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 248
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 249 LPCAHNFHVECIDQWLRLNVKCPRCR 274
>gi|326436567|gb|EGD82137.1| hypothetical protein PTSG_02811 [Salpingoeca sp. ATCC 50818]
Length = 262
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+ LP+ +Y E G+S+ +C +CL Y + E VR+L C H+FH CVD W
Sbjct: 184 LDHLPTRQYDAAQDKTEEGDSS----HDQCVVCLQNYSDGEMVRELDCHHLFHQACVDPW 239
Query: 321 LRILSCCPLCKQEL 334
L + CPLCK+ +
Sbjct: 240 LMQHNTCPLCKRAV 253
>gi|5360113|gb|AAD42875.1|AF155109_1 putative ring zinc finger protein NY-REN-43 antigen [Homo sapiens]
gi|189054525|dbj|BAG37298.1| unnamed protein product [Homo sapiens]
Length = 483
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 429 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 471
>gi|15219561|ref|NP_174766.1| RING-H2 finger protein ATL34 [Arabidopsis thaliana]
gi|68565270|sp|Q9C7I1.1|ATL34_ARATH RecName: Full=RING-H2 finger protein ATL34; Flags: Precursor
gi|12322941|gb|AAG51457.1|AC069160_3 RING zinc finger protein, putative [Arabidopsis thaliana]
gi|332193658|gb|AEE31779.1| RING-H2 finger protein ATL34 [Arabidopsis thaliana]
Length = 327
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 67/148 (45%), Gaps = 29/148 (19%)
Query: 202 QRAPNLHVLCISLLAWNALSYSFPFLLFLLLCCCV--------PLISSVLGYNMNMGA-- 251
QR + + I++L + LLF +L CCV P +S G
Sbjct: 40 QRPNQVPAVIIAMLMFT--------LLFSMLACCVCYKYTNTSPHGTSSDTEEGGHGEVA 91
Query: 252 ----ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+G D I+ PS+ Y +V L+ G EC ICL +++++E +R +P
Sbjct: 92 FTRRTSRGLGKDVINSFPSFLYSQV-KGLKIGKGGV-----ECAICLNEFEDEETLRLMP 145
Query: 308 -CSHMFHLKCVDQWLRILSCCPLCKQEL 334
CSH FH C+D WL S CP+C+ L
Sbjct: 146 PCSHAFHASCIDVWLSSRSTCPVCRASL 173
>gi|302800686|ref|XP_002982100.1| hypothetical protein SELMODRAFT_59303 [Selaginella moellendorffii]
gi|300150116|gb|EFJ16768.1| hypothetical protein SELMODRAFT_59303 [Selaginella moellendorffii]
Length = 147
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%), Gaps = 3/64 (4%)
Query: 269 YKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCC 327
Y R+ A P +D C ICLA Y+E E +R LP C H+FH++C+D W+R+ + C
Sbjct: 63 YPRI--VFSAQQPLPHPQDTACAICLADYREAEMLRVLPDCRHVFHVQCIDSWMRLQATC 120
Query: 328 PLCK 331
P+C+
Sbjct: 121 PMCR 124
>gi|387016758|gb|AFJ50498.1| Hypothetical protein LOC100554767 [Crotalus adamanteus]
Length = 634
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 15/83 (18%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE----CCICLAKYKEKEEVRKLPCS 309
+G + DQI L + Y+ P +ED E C +C+ +Y ++R+LPC
Sbjct: 559 RGLTKDQIDNLSTRNYEN-----------PHSEDDEISKTCSVCINEYVVGNKLRQLPCM 607
Query: 310 HMFHLKCVDQWLRILSCCPLCKQ 332
H FH C+D+WL S CP+C+Q
Sbjct: 608 HEFHFHCIDRWLSENSTCPICRQ 630
>gi|357129250|ref|XP_003566278.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 299
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 7/95 (7%)
Query: 244 GYNMNMGAADKGASDDQISRLPSWRYKR----VDSNLEAGNSAPANEDP--ECCICLAKY 297
G +G+ D G S D I+ LP++ Y+ S G + E EC +CL +
Sbjct: 56 GTGALLGSDDLGLSMDDITALPTFTYRSRAPMTPSRCGGGGKSKGREAAAVECVVCLQEL 115
Query: 298 KEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
+ + VR LP C H FH C+D WLR S CP+C+
Sbjct: 116 ADGDVVRVLPACKHFFHGGCIDVWLRTRSSCPVCR 150
>gi|255638731|gb|ACU19670.1| unknown [Glycine max]
Length = 205
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 311
A + A + I LPS+R V +N EC ICL ++ +VR LPC+H
Sbjct: 34 AQREAVEALIQELPSFRLTAVPTNCS-----------ECLICLEEFHVGNQVRGLPCTHN 82
Query: 312 FHLKCVDQWLRILSCCPLCK 331
FH++C+D+WLR+ CP C+
Sbjct: 83 FHVECIDEWLRLNVNCPRCR 102
>gi|224124792|ref|XP_002319423.1| predicted protein [Populus trichocarpa]
gi|222857799|gb|EEE95346.1| predicted protein [Populus trichocarpa]
Length = 150
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 289 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+C ICL ++ E E+VR LP CSH FH+KC+D+WL + S CPLC+Q L
Sbjct: 101 DCPICLGEFSEGEKVRVLPQCSHGFHVKCIDRWLLLHSSCPLCRQAL 147
>gi|357492753|ref|XP_003616665.1| RING finger protein [Medicago truncatula]
gi|355518000|gb|AES99623.1| RING finger protein [Medicago truncatula]
Length = 170
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 50/87 (57%), Gaps = 8/87 (9%)
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 308
+ +G + D I +LP ++ SN A E+ ECCICL+ +++ E+V+ LP C
Sbjct: 70 SSQSEGLNADAIKKLPIILHQSNTSNH-------ALEETECCICLSTFRDGEKVKVLPSC 122
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQELE 335
H FH +CVD WL S CPLC+ L+
Sbjct: 123 DHYFHCECVDAWLVNHSSCPLCRASLK 149
>gi|335305810|ref|XP_001924902.3| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Sus scrofa]
Length = 635
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 32/45 (71%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
C IC+ +Y E ++R LPCSH FH+ C+D+WL S CP+C+ E+
Sbjct: 581 CSICITEYTEGNKIRILPCSHEFHIHCIDRWLAENSTCPICRGEI 625
>gi|326529613|dbj|BAK04753.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 292
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 14/89 (15%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVD---SNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G +G S D ++ LPS Y+ D SN+E +C IC +++E E +
Sbjct: 207 VGTESRGVSADTLASLPSVTYQAQDKQESNME-----------QCVICRVEFEEGESLVA 255
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
LPC H +H C++QWL++ CP+C E+
Sbjct: 256 LPCKHSYHSDCINQWLQLNKVCPMCSAEV 284
>gi|224117248|ref|XP_002331758.1| predicted protein [Populus trichocarpa]
gi|222874455|gb|EEF11586.1| predicted protein [Populus trichocarpa]
Length = 224
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 7/84 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
KG D + ++P + + SN N E C +CL ++ E VR LP C
Sbjct: 146 GGSKGLPGDSLEKIPKIK---ITSN---NNGDATGEKVACSVCLQDFQLGETVRSLPHCH 199
Query: 310 HMFHLKCVDQWLRILSCCPLCKQE 333
HMFHL C+D+WL + CPLC+++
Sbjct: 200 HMFHLPCIDKWLLKHASCPLCRRD 223
>gi|149411042|ref|XP_001505684.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like
[Ornithorhynchus anatinus]
Length = 595
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 541 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 583
>gi|125524894|gb|EAY73008.1| hypothetical protein OsI_00881 [Oryza sativa Indica Group]
Length = 237
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 289 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C +CL++ + E+VR+LP C H+FH++CVD WLR + CPLC+ E E
Sbjct: 128 DCAVCLSELADGEKVRELPNCRHVFHVECVDAWLRSRTTCPLCRAEAE 175
>gi|115488388|ref|NP_001066681.1| Os12g0432600 [Oryza sativa Japonica Group]
gi|77554889|gb|ABA97685.1| Zinc finger, C3HC4 type family protein, expressed [Oryza sativa
Japonica Group]
gi|113649188|dbj|BAF29700.1| Os12g0432600 [Oryza sativa Japonica Group]
gi|215766317|dbj|BAG98545.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 185
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 10/82 (12%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G S + I +P++ Y+R S +C +C+A K+ + VR+LP C H F
Sbjct: 96 RGLSQEDIEAIPAFEYRRGSSGSGVA---------QCAVCIAAVKDGDTVRRLPACGHAF 146
Query: 313 HLKCVDQWLRILSCCPLCKQEL 334
H CVD WLR + CP+C+ ++
Sbjct: 147 HAPCVDGWLRDHATCPMCRADV 168
>gi|357164387|ref|XP_003580036.1| PREDICTED: uncharacterized protein LOC100837445 [Brachypodium
distachyon]
Length = 695
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 15/89 (16%)
Query: 249 MGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPE----CCICLAKYKEKEEV 303
+G G S+++I S L W+Y+ + P E P CCIC +Y E++
Sbjct: 612 IGHVSTGLSEEKIMSGLKQWKYRDI----------PFEEPPTGVEPCCICQEEYTNGEDM 661
Query: 304 RKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
+L C H FH C+ QWL I + CP+CK+
Sbjct: 662 GRLDCGHDFHTTCIKQWLVIKNICPICKK 690
>gi|297846872|ref|XP_002891317.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337159|gb|EFH67576.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 648
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 46/78 (58%), Gaps = 9/78 (11%)
Query: 255 GASDDQIS-RLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
G +++ IS RL +YK + S+P +P CCIC +YKE E++ L C H FH
Sbjct: 567 GLNEETISNRLKQQKYK-------SSTSSPQEVEP-CCICQEEYKEGEDIGMLECGHDFH 618
Query: 314 LKCVDQWLRILSCCPLCK 331
+C+ +WL+ + CP+CK
Sbjct: 619 SQCIKEWLKQKNLCPICK 636
>gi|449436824|ref|XP_004136192.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus]
gi|449532198|ref|XP_004173069.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Cucumis
sativus]
Length = 373
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 47/84 (55%), Gaps = 10/84 (11%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
A G + I + +YKR D +E +C +CL++++E E +R LP CSH
Sbjct: 115 ATTGLDEALIKSITVCKYKREDGLVEGS---------DCSVCLSEFQEDESLRLLPKCSH 165
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
FHL+C+D WL+ S CPLC+ +
Sbjct: 166 AFHLQCIDTWLKSHSNCPLCRANI 189
>gi|297832398|ref|XP_002884081.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297329921|gb|EFH60340.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 239
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 49/99 (49%), Gaps = 14/99 (14%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLE--------AGNS---APANEDPECCICLAK 296
MGA D A DD S + K + L GN+ A N DP C +CL
Sbjct: 143 QMGAVDA-AFDDHTSLFDTGGSKGLTGELVEKIPKMTITGNNNTDASENRDP-CSVCLQD 200
Query: 297 YKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
++ E VR LP C HMFHL C+D WL CP+C+++L
Sbjct: 201 FQLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDL 239
>gi|413916031|gb|AFW55963.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 207
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 260 QISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVD 318
++ R+P Y+ +N + S+ ++D +C ICL ++ + EE+R LP C H FH++C+D
Sbjct: 112 ELRRIPVVLYE---ANKQPSASSGTDDDDDCAICLGEFDDGEELRLLPGCHHGFHVQCID 168
Query: 319 QWLRILSCCPLCKQEL 334
WL + + CP C+ L
Sbjct: 169 VWLVMHASCPTCRNSL 184
>gi|348555451|ref|XP_003463537.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 2
[Cavia porcellus]
Length = 984
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEATEEDTEEKCTICLSILEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|301120268|ref|XP_002907861.1| conserved hypothetical protein [Phytophthora infestans T30-4]
gi|262102892|gb|EEY60944.1| conserved hypothetical protein [Phytophthora infestans T30-4]
Length = 744
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
+GAS I +LP++ + + + GN P+C IC ++ EE++ LPC H +H
Sbjct: 666 RGASASLIHQLPTYTFSTAKEHNDQGN-------PDCLICRCSFEVGEEIKSLPCFHSYH 718
Query: 314 LKCVDQWLRILSCCPLCK 331
CVD WL + CP+C+
Sbjct: 719 SDCVDSWLSLNKVCPVCQ 736
>gi|413938750|gb|AFW73301.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 75
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 35/49 (71%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
ED ECCICL+ Y++ E+ LPC+H FH C+ +WLR+ + CPLCK +
Sbjct: 20 EDAECCICLSSYEDGAELSALPCNHHFHWPCITKWLRMNATCPLCKYNI 68
>gi|170571824|ref|XP_001891879.1| hypotetical protein, conserved [Brugia malayi]
gi|158603363|gb|EDP39313.1| hypothetical protein, conserved [Brugia malayi]
Length = 510
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
C IC +++++ VR LPC+H FHLKC+D+WLR CP+C+Q +
Sbjct: 393 CVICQCDFEKRDMVRMLPCAHHFHLKCIDKWLRGNRTCPICRQNV 437
>gi|224063645|ref|XP_002301244.1| predicted protein [Populus trichocarpa]
gi|222842970|gb|EEE80517.1| predicted protein [Populus trichocarpa]
Length = 373
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 44/78 (56%), Gaps = 6/78 (7%)
Query: 256 ASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLK 315
A + ++ P YK+ G A + +C ICL Y+E +++R LPCSH +H+
Sbjct: 282 APEAVVNSFPLKNYKKFQ-----GTENVAQHEQQCHICLVDYEEGDKIRVLPCSHEYHMS 336
Query: 316 CVDQWLR-ILSCCPLCKQ 332
CVD+WL+ I CPLC+
Sbjct: 337 CVDKWLKEIHGVCPLCRD 354
>gi|198422303|ref|XP_002124964.1| PREDICTED: similar to RING finger protein 150 [Ciona intestinalis]
Length = 385
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 280 NSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
N + + C IC+ YK E VR+LPC H+FH KCVD WL CP+CK
Sbjct: 256 NDEIVSTESVCAICIENYKTAEVVRELPCRHIFHKKCVDPWLHTKHTCPMCK 307
>gi|189527584|ref|XP_686027.3| PREDICTED: e3 ubiquitin-protein ligase RNF12-A-like isoform 1
[Danio rerio]
Length = 632
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 578 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 620
>gi|296084573|emb|CBI25594.3| unnamed protein product [Vitis vinifera]
Length = 180
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 44/62 (70%), Gaps = 2/62 (3%)
Query: 275 NLEAGNSAPANED-PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQ 332
N + ++A + ED +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+
Sbjct: 102 NHKKADTAQSGEDVAQCYICLAEYEEGDKIRVLPCHHEYHMSCVDKWLKEIHGVCPLCRG 161
Query: 333 EL 334
++
Sbjct: 162 DV 163
>gi|297802346|ref|XP_002869057.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297314893|gb|EFH45316.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 236
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
KG + D + ++P + +NL+A N+D C +CL ++ E VR LP C
Sbjct: 158 GGSKGLTGDLVDKIPKIKITG-KNNLDA----SGNKD-SCSVCLQDFQLGETVRSLPHCH 211
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
HMFHL C+D WL CP+C+++L
Sbjct: 212 HMFHLPCIDNWLFRHGSCPMCRRDL 236
>gi|224055977|ref|XP_002298709.1| predicted protein [Populus trichocarpa]
gi|222845967|gb|EEE83514.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 51/101 (50%), Gaps = 9/101 (8%)
Query: 235 CVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 294
C L++S N + AA+ G + P +Y D NL D +C ICL
Sbjct: 89 CSNLVASESAANPSTQAANTGVKRKALKTFPIVKYS-TDLNLPG-------LDTQCVICL 140
Query: 295 AKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+++ E VR LP C+H FH+KC+D+WL S CP C+ L
Sbjct: 141 SEFTPGEHVRLLPKCNHGFHVKCIDKWLSSHSSCPTCRHCL 181
>gi|428181381|gb|EKX50245.1| hypothetical protein GUITHDRAFT_50560, partial [Guillardia theta
CCMP2712]
Length = 50
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 35/47 (74%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
E P C ICL ++ E EE++ LPC H+FH C+DQWLR+ S CPLCK+
Sbjct: 1 EKPTCSICLGEFAEGEELKSLPCVHVFHCACIDQWLRLSSECPLCKR 47
>gi|357484247|ref|XP_003612411.1| Ring finger protein [Medicago truncatula]
gi|355513746|gb|AES95369.1| Ring finger protein [Medicago truncatula]
gi|388496508|gb|AFK36320.1| unknown [Medicago truncatula]
Length = 215
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 60/132 (45%), Gaps = 25/132 (18%)
Query: 219 ALSYSFPFLLFLLLC---CCVPLIS----------SVLGYNMNMGAADKGASDDQISRLP 265
A+ F +L LLC C V LI+ S G + A+KG + LP
Sbjct: 28 AIESDFVVILAALLCALICVVGLIAVARCAWLRRDSGAGNSPQQALANKGLKKKVLQSLP 87
Query: 266 SWRYKRVDSNLEAGNSAPAN--EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLR 322
+ Y VDSN P EC ICL+ + +E+R LP C H FH+ C+D WL
Sbjct: 88 KFSY--VDSN-------PGKWLATTECAICLSDFAAGDEIRVLPQCGHGFHVACIDTWLG 138
Query: 323 ILSCCPLCKQEL 334
S CP C+Q L
Sbjct: 139 SHSSCPSCRQIL 150
>gi|226500604|ref|NP_001150413.1| LOC100284043 [Zea mays]
gi|195639078|gb|ACG39007.1| protein binding protein [Zea mays]
gi|219888467|gb|ACL54608.1| unknown [Zea mays]
gi|414881944|tpg|DAA59075.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 374
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 44/80 (55%), Gaps = 11/80 (13%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 311
A + A + I LP +R K V ++ EC ICL ++ EVR LPC+H
Sbjct: 206 AQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRGLPCAHN 254
Query: 312 FHLKCVDQWLRILSCCPLCK 331
FH++C+DQWLR+ CP C+
Sbjct: 255 FHVECIDQWLRLNVKCPRCR 274
>gi|353235357|emb|CCA67371.1| hypothetical protein PIIN_01202 [Piriformospora indica DSM 11827]
Length = 1088
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 51/108 (47%), Gaps = 4/108 (3%)
Query: 229 FLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP 288
++L +++ ++G +G S + LPS YK E ++
Sbjct: 839 YVLDDDFDDSYEALMALTQHVGPVKRGCSQKSLEELPSGTYKEFS---EGATEKVVGDNG 895
Query: 289 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
C ICL Y+ ++ KLP CSH +H CV +WL+ CP+C++ +E
Sbjct: 896 NCAICLEDYQPEDACMKLPRCSHFYHKDCVKEWLKSAKTCPVCRETVE 943
>gi|242072438|ref|XP_002446155.1| hypothetical protein SORBIDRAFT_06g002790 [Sorghum bicolor]
gi|241937338|gb|EES10483.1| hypothetical protein SORBIDRAFT_06g002790 [Sorghum bicolor]
Length = 696
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
Query: 242 VLGYNMNMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 300
+L +G + G +++ I S + W+Y + +LE P +P CCIC Y E
Sbjct: 606 LLALGERIGYVNTGLTEENIMSNMKQWKYALI--SLE---DPPTGVEP-CCICQEDYVEG 659
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
E++ +L C H FH C+ QWL I + CP+CK+
Sbjct: 660 EDLGRLDCGHDFHTGCIKQWLVIKNLCPICKK 691
>gi|148234951|ref|NP_001090211.1| E3 ubiquitin-protein ligase arkadia-B [Xenopus laevis]
gi|82237141|sp|Q6NRV8.1|R111B_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-B; AltName:
Full=RING finger protein 111-B
gi|47124697|gb|AAH70603.1| Rnf111 protein [Xenopus laevis]
Length = 959
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 297
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 855 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEATEEDTEEKCTICLSIL 914
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 915 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 952
>gi|115477677|ref|NP_001062434.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|42407550|dbj|BAD10755.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|42408731|dbj|BAD09949.1| putative RING-H2 finger protein RHG1a [Oryza sativa Japonica Group]
gi|113624403|dbj|BAF24348.1| Os08g0548300 [Oryza sativa Japonica Group]
gi|125604240|gb|EAZ43565.1| hypothetical protein OsJ_28186 [Oryza sativa Japonica Group]
gi|215706910|dbj|BAG93370.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 305
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 249 MGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G +G S D ++ LPS Y+ + D N+E +C IC +++E E +
Sbjct: 220 VGTESRGLSADTLASLPSITYRAQDKQDGNME-----------QCVICRVEFEEGESLVA 268
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
LPC H +H +C++QWL++ CP+C E+
Sbjct: 269 LPCKHSYHSECINQWLQLNKVCPMCSAEV 297
>gi|410988439|ref|XP_004000492.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-like [Felis catus]
Length = 631
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
C IC+ +Y E ++R LPC+H FH+ C+D+WL S CP+C++E+
Sbjct: 577 CTICITEYTEGNKLRILPCTHEFHVHCIDRWLSENSTCPICRREV 621
>gi|357148802|ref|XP_003574899.1| PREDICTED: E3 ubiquitin ligase BIG BROTHER-related-like
[Brachypodium distachyon]
Length = 302
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 49/89 (55%), Gaps = 14/89 (15%)
Query: 249 MGAADKGASDDQISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G +G S D ++ LPS Y+ + DSN E +C IC +++E E +
Sbjct: 217 VGTESRGLSADTLASLPSVTYEAKDKQDSNTE-----------QCVICRVEFEEGESLVA 265
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
LPC H +H +C++QWL++ CP+C E+
Sbjct: 266 LPCKHSYHSECINQWLQLNKVCPMCSAEV 294
>gi|351727597|ref|NP_001237678.1| uncharacterized protein LOC100306109 [Glycine max]
gi|255627575|gb|ACU14132.1| unknown [Glycine max]
Length = 242
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 44/83 (53%), Gaps = 7/83 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
KG S D + ++P + D+N +A + + C +CL + E VR LP C
Sbjct: 154 GGSKGLSGDLVEKIPKIKIT-TDNNFDA-----SGDRVSCSVCLQDFMLGETVRSLPHCH 207
Query: 310 HMFHLKCVDQWLRILSCCPLCKQ 332
HMFHL C+D+WL CPLC++
Sbjct: 208 HMFHLPCIDKWLFRHGSCPLCRK 230
>gi|115457184|ref|NP_001052192.1| Os04g0185500 [Oryza sativa Japonica Group]
gi|113563763|dbj|BAF14106.1| Os04g0185500 [Oryza sativa Japonica Group]
gi|215694293|dbj|BAG89286.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 709
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 242 VLGYNMNMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 300
+L +G + G S+D+I + L W+Y + +E P CCIC +Y E
Sbjct: 619 LLALGERIGYVNTGLSEDKIRTGLKQWKYVSIP--IEE----PLTGVEPCCICQEEYAEG 672
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
E++ +L C H FH C+ QWL I + CP+CK+
Sbjct: 673 EDMGRLDCGHDFHTACIKQWLVIKNLCPICKK 704
>gi|299473025|emb|CBN77418.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 458
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/42 (54%), Positives = 30/42 (71%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
C ICLA Y+E+E ++ LPC H FH C+D WL + + CPLCK
Sbjct: 141 CAICLAAYQEEEVIKVLPCGHDFHSDCLDPWLEVKAECPLCK 182
>gi|38344619|emb|CAE02518.2| OSJNBb0003A12.5 [Oryza sativa Japonica Group]
gi|125589549|gb|EAZ29899.1| hypothetical protein OsJ_13953 [Oryza sativa Japonica Group]
Length = 684
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 242 VLGYNMNMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 300
+L +G + G S+D+I + L W+Y + +E P CCIC +Y E
Sbjct: 594 LLALGERIGYVNTGLSEDKIRTGLKQWKYVSIP--IEE----PLTGVEPCCICQEEYAEG 647
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
E++ +L C H FH C+ QWL I + CP+CK+
Sbjct: 648 EDMGRLDCGHDFHTACIKQWLVIKNLCPICKK 679
>gi|116317854|emb|CAH65886.1| OSIGBa0148J22.5 [Oryza sativa Indica Group]
gi|116317864|emb|CAH65894.1| OSIGBa0132G14.2 [Oryza sativa Indica Group]
gi|125547379|gb|EAY93201.1| hypothetical protein OsI_15006 [Oryza sativa Indica Group]
Length = 684
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 7/92 (7%)
Query: 242 VLGYNMNMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 300
+L +G + G S+D+I + L W+Y + +E P CCIC +Y E
Sbjct: 594 LLALGERIGYVNTGLSEDKIRTGLKQWKYVSIP--IEE----PLTGVEPCCICQEEYAEG 647
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
E++ +L C H FH C+ QWL I + CP+CK+
Sbjct: 648 EDMGRLDCGHDFHTACIKQWLVIKNLCPICKK 679
>gi|224063957|ref|XP_002301320.1| predicted protein [Populus trichocarpa]
gi|222843046|gb|EEE80593.1| predicted protein [Populus trichocarpa]
Length = 197
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 34/47 (72%), Gaps = 1/47 (2%)
Query: 286 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
ED +C ICL +Y+EKE +R +P C H FHL C+D WLR S CP+C+
Sbjct: 78 EDAQCSICLGEYQEKEVLRIMPGCGHNFHLSCIDVWLRKQSTCPVCR 124
>gi|189521454|ref|XP_001922708.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like [Danio rerio]
Length = 988
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/97 (34%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 242 VLGYNMNMGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 298
+L +G ++GAS I R ++ +++ E A + + +C ICL+ +
Sbjct: 885 LLHLEERLGTVNRGASQGTIERCTYPHKYKKRKLHGKQEEEEGAEEDTEEKCTICLSILE 944
Query: 299 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 EGEDVRRLPCMHLFHQLCVDQWLLTNKKCPICRVDIE 981
>gi|376335795|gb|AFB32557.1| hypothetical protein 0_15036_01, partial [Abies alba]
Length = 135
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
A+ G D I+ LPS Y G S +C ICLA++ E E VR LP C+H
Sbjct: 65 ANTGMKDKSINALPSIIY---------GKSVRPELATDCAICLAEFLEGEGVRVLPSCNH 115
Query: 311 MFHLKCVDQWLRILSCCPLC 330
FH++CVD+WLR S CP C
Sbjct: 116 GFHMECVDKWLRSHSSCPTC 135
>gi|403307926|ref|XP_003944433.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Saimiri boliviensis
boliviensis]
Length = 271
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 215 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YKRV 272
+W+ + +S P +++ +LG N G A ++I+ LP+ ++V
Sbjct: 132 FSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQEQV 189
Query: 273 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
D+ LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C++
Sbjct: 190 DTGLE------------CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRK 237
Query: 333 EL 334
L
Sbjct: 238 SL 239
>gi|391342339|ref|XP_003745478.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Metaseiulus
occidentalis]
Length = 195
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 34/52 (65%)
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
E C ICL Y+ +EEVR+LPC H+FH C+DQW R CP+C+ ++ +
Sbjct: 107 KEGVRCSICLTDYEVEEEVRRLPCMHLFHAACIDQWFRADKRCPMCRVDITK 158
>gi|242060666|ref|XP_002451622.1| hypothetical protein SORBIDRAFT_04g004780 [Sorghum bicolor]
gi|241931453|gb|EES04598.1| hypothetical protein SORBIDRAFT_04g004780 [Sorghum bicolor]
Length = 255
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 5/83 (6%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
KG D I+ LP + Y+R E + EC +CL + + R+LP C H+F
Sbjct: 130 KGLDADAIAALPEFMYRR----KEDAADGKEERELECAVCLGAMADGDAARRLPSCMHVF 185
Query: 313 HLKCVDQWLRILSCCPLCKQELE 335
H CVD WLR S CP+C+ E++
Sbjct: 186 HRGCVDVWLRERSTCPVCRAEVD 208
>gi|157137022|ref|XP_001656980.1| ring finger protein [Aedes aegypti]
gi|108884247|gb|EAT48472.1| AAEL000523-PA [Aedes aegypti]
Length = 559
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + +I +LPS+++ ++ G+ C +C+ ++ ++ +R LPCSH
Sbjct: 475 AKPRGLARPEIDQLPSYKF---NAETHTGDQT------SCVVCMCDFEARQILRVLPCSH 525
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 526 EFHAKCVDKWLRSNRTCPICR 546
>gi|255568331|ref|XP_002525140.1| ring finger protein, putative [Ricinus communis]
gi|223535599|gb|EEF37267.1| ring finger protein, putative [Ricinus communis]
Length = 254
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 45/76 (59%), Gaps = 8/76 (10%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 319
I+ LP + YK+ + + E + D EC +CL+ +++E R LP C H FH +C+D+
Sbjct: 105 IASLPIFVYKQSNGDQE-------DNDQECAVCLSVLQDQEMARSLPNCKHTFHAECIDK 157
Query: 320 WLRILSCCPLCKQELE 335
WL S CP+C+ E E
Sbjct: 158 WLTSHSTCPICRTEAE 173
>gi|449460935|ref|XP_004148199.1| PREDICTED: RING-H2 finger protein ATL66-like [Cucumis sativus]
gi|449507803|ref|XP_004163133.1| PREDICTED: RING-H2 finger protein ATL66-like [Cucumis sativus]
Length = 168
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 50/91 (54%), Gaps = 2/91 (2%)
Query: 245 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 304
+ + +G I LP YK + +A +A AN+ EC ICL +++ E+V+
Sbjct: 68 HRLPSSPPQQGLGATTIISLPITLYKPPAAKEDAPGAA-ANDAGECSICLGVFEDGEKVK 126
Query: 305 KLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
LP C H +H +CVD+WLR S CPLC+ L
Sbjct: 127 ILPPCRHCYHSECVDRWLRSHSSCPLCRVSL 157
>gi|323450871|gb|EGB06750.1| hypothetical protein AURANDRAFT_28873, partial [Aureococcus
anophagefferens]
Length = 65
Score = 63.2 bits (152), Expect = 2e-07, Method: Composition-based stats.
Identities = 23/47 (48%), Positives = 34/47 (72%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
ED ECCICL +++++E ++KL C H+FHL C+ +WL CP C+Q
Sbjct: 11 EDNECCICLDEFEDEERIKKLRCGHLFHLNCIKKWLLADMRCPTCRQ 57
>gi|294461394|gb|ADE76258.1| unknown [Picea sitchensis]
Length = 541
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 36/48 (75%), Gaps = 1/48 (2%)
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCK 331
+E +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+
Sbjct: 478 DEAAQCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHRVCPLCR 525
>gi|170039241|ref|XP_001847450.1| ring finger protein [Culex quinquefasciatus]
gi|167862851|gb|EDS26234.1| ring finger protein [Culex quinquefasciatus]
Length = 539
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + +I +LPS+++ ++ G+ C +C+ ++ ++ +R LPCSH
Sbjct: 455 AKPRGLARPEIDQLPSYKF---NAETHTGDQT------SCVVCMCDFEARQVLRVLPCSH 505
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 506 EFHAKCVDKWLRSNRTCPICR 526
>gi|82217359|sp|Q90ZT7.1|R111A_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-A; AltName:
Full=RING finger protein 111-A
gi|13752371|gb|AAK38637.1|AF329847_1 ring finger-H2 protein, partial [Xenopus laevis]
Length = 923
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 297
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 819 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSIL 878
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 879 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 916
>gi|340522021|gb|EGR52254.1| predicted protein [Trichoderma reesei QM6a]
Length = 514
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 37/58 (63%), Gaps = 1/58 (1%)
Query: 278 AGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILSCCPLCKQEL 334
A ++AP E+ C IC ++E E++R LPC+H FH C+D WL + CPLC+ +L
Sbjct: 335 AADAAPPPENAGCSICTEDFREGEDMRVLPCNHKFHPTCIDPWLVNVSGTCPLCRLDL 392
>gi|301133572|gb|ADK63408.1| C3HC4 type zinc finger protein [Brassica rapa]
Length = 355
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 46/89 (51%), Gaps = 11/89 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A A + I LP +R K V + EC ICL +++ EVR
Sbjct: 202 GLYLTPAQTEAVEALIQELPKFRLKAVPDDCG-----------ECLICLEEFQIGHEVRG 250
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
LPC+H FH++C+DQWLR+ CP C+ +
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCRSSV 279
>gi|357477371|ref|XP_003608971.1| RING finger protein [Medicago truncatula]
gi|355510026|gb|AES91168.1| RING finger protein [Medicago truncatula]
Length = 365
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A + A + I LP +R K V ++ EC ICL +++ EVR
Sbjct: 185 GLYLTPAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFRVGNEVRG 233
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+D+WLR+ CP C+
Sbjct: 234 LPCAHNFHVECIDEWLRLNVKCPRCR 259
>gi|198434915|ref|XP_002128365.1| PREDICTED: similar to ring finger protein 215 [Ciona intestinalis]
Length = 370
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 53/125 (42%), Gaps = 1/125 (0%)
Query: 208 HVLCISLLAWNALSY-SFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS 266
H + + WNAL + S LF + S L Y + + +D + RL
Sbjct: 233 HPILVKHEQWNALFFISVSICLFFFFKIGWVVFHSDLPYYTYQDVSLREMTDTAVQRLKI 292
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSC 326
Y+ + N+ C ICL KY + +R LPC H FH+ C+D WL
Sbjct: 293 QIYRNRNRRKLDEACNETNQPERCAICLDKYYSLQRLRVLPCKHRFHVGCIDPWLLTRRT 352
Query: 327 CPLCK 331
CPLCK
Sbjct: 353 CPLCK 357
>gi|67968828|dbj|BAE00771.1| unnamed protein product [Macaca fascicularis]
Length = 483
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 429 CSVCITEYTEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 471
>gi|432878751|ref|XP_004073396.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oryzias
latipes]
Length = 602
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 548 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 590
>gi|167017618|gb|ABZ04780.1| At1g04360 [Arabidopsis thaliana]
Length = 350
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 51/84 (60%), Gaps = 3/84 (3%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
++G + I +P +++K+ D + AG + EC +CL +++E E++R +P C H
Sbjct: 80 VNRGLDESAIRAIPVFKFKKRD--VVAGEEDQSKNSQECSVCLNEFQEDEKLRIIPNCWH 137
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 138 VFHIDCIDIWLQGNANCPLCRTSV 161
>gi|255583480|ref|XP_002532498.1| ring finger protein, putative [Ricinus communis]
gi|223527773|gb|EEF29874.1| ring finger protein, putative [Ricinus communis]
Length = 550
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 334
+C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+ ++
Sbjct: 480 QCYICLAEYEEGDKIRVLPCHHEYHMACVDKWLKEIHGVCPLCRGDV 526
>gi|30680091|ref|NP_179364.2| NEP1-interacting protein 2 [Arabidopsis thaliana]
gi|68565195|sp|Q8GT74.1|NIP2_ARATH RecName: Full=NEP1-interacting protein 2; AltName: Full=RING-H2
finger protein ATL25
gi|27524904|emb|CAC81898.1| NEP1-interacting protein 2 [Arabidopsis thaliana]
gi|330251581|gb|AEC06675.1| NEP1-interacting protein 2 [Arabidopsis thaliana]
Length = 241
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 12/98 (12%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNL---------EAGNSAPANEDPECC-ICLAKY 297
MGA D A DD S + K + +L N+ A+E+ + C +CL +
Sbjct: 145 QMGAVDT-AFDDHTSLFDTGGSKGLTGDLVEKIPKMTITGNNNTDASENTDSCSVCLQDF 203
Query: 298 KEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+ E VR LP C HMFHL C+D WL CP+C++++
Sbjct: 204 QLGETVRSLPHCHHMFHLPCIDNWLLRHGSCPMCRRDI 241
>gi|432878338|ref|XP_004073308.1| PREDICTED: RING finger protein 38-like [Oryzias latipes]
Length = 642
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 241 SVLGYNMNMGAAD-KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---CCICLAK 296
++L +G A +G + I +LPS+R+ P N E C +C++
Sbjct: 549 ALLNLAEQLGEAKLRGLTKGDIEQLPSYRFN------------PNNHQSEQTLCVVCMSD 596
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 333
++ ++ +R LPCSH FH KCVD+WLR CP+C+ +
Sbjct: 597 FESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICRAD 633
>gi|356536643|ref|XP_003536846.1| PREDICTED: RING-H2 finger protein ATL1-like [Glycine max]
Length = 340
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/80 (35%), Positives = 51/80 (63%), Gaps = 3/80 (3%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G + I +P +YK + N E G + + EC +CL+++++ E++R +P CSH+F
Sbjct: 84 RGLEEAVIKLIPVIQYKPEEGNTEFGERSLISS--ECSVCLSEFEQDEKLRVIPNCSHVF 141
Query: 313 HLKCVDQWLRILSCCPLCKQ 332
H+ C+D WL+ + CPLC++
Sbjct: 142 HIDCIDVWLQNNAHCPLCRR 161
>gi|302806006|ref|XP_002984753.1| hypothetical protein SELMODRAFT_121181 [Selaginella moellendorffii]
gi|300147339|gb|EFJ14003.1| hypothetical protein SELMODRAFT_121181 [Selaginella moellendorffii]
Length = 207
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 47/82 (57%), Gaps = 9/82 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A + G + + ++P + Y RV G+S EC +CL +++E +E+R LP C
Sbjct: 130 AMNTGLDESIVKKIPVYVY-RVGGEGVVGSS-------ECVVCLGEFEEDDELRILPKCL 181
Query: 310 HMFHLKCVDQWLRILSCCPLCK 331
H FHL C+D WLR S CPLC+
Sbjct: 182 HAFHLSCIDVWLRSHSNCPLCR 203
>gi|115469704|ref|NP_001058451.1| Os06g0695600 [Oryza sativa Japonica Group]
gi|53791836|dbj|BAD53902.1| putative DNA binding zinc finger protein [Oryza sativa Japonica
Group]
gi|113596491|dbj|BAF20365.1| Os06g0695600 [Oryza sativa Japonica Group]
gi|215694615|dbj|BAG89806.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636148|gb|EEE66280.1| hypothetical protein OsJ_22486 [Oryza sativa Japonica Group]
Length = 579
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 242 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 300
+L +G+ SD+Q+ + L YK +S+LEA + +D +C IC +Y E
Sbjct: 478 LLALEERIGSVSTALSDEQLVKCLKRNVYKLPNSDLEANRAVL--DDAKCSICQEEYIEG 535
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
EEV ++ C H +H+ C+ +WLR + CP+CK
Sbjct: 536 EEVGRMQCEHQYHVSCIHEWLRQKNWCPICK 566
>gi|42567430|ref|NP_195309.2| NEP1-interacting protein 1 [Arabidopsis thaliana]
gi|68565196|sp|Q8GT75.2|NIP1_ARATH RecName: Full=NEP1-interacting protein 1; AltName: Full=RING-H2
finger protein ATL26
gi|26451101|dbj|BAC42655.1| unknown protein [Arabidopsis thaliana]
gi|30017273|gb|AAP12870.1| At4g35840 [Arabidopsis thaliana]
gi|332661179|gb|AEE86579.1| NEP1-interacting protein 1 [Arabidopsis thaliana]
Length = 236
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
KG + D + ++P + +NL+A N+D C +CL ++ E VR LP C
Sbjct: 158 GGSKGLTGDLVDKIPKIKITG-KNNLDA----SGNKD-SCSVCLQDFQLGETVRSLPHCH 211
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
HMFHL C+D WL CP+C+++L
Sbjct: 212 HMFHLPCIDNWLFRHGSCPMCRRDL 236
>gi|410914034|ref|XP_003970493.1| PREDICTED: E3 ubiquitin-protein ligase RLIM-like [Takifugu
rubripes]
Length = 661
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 607 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 649
>gi|449466065|ref|XP_004150747.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
Length = 313
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 221 SYSFPFLLFLLLCCCVPLISSVL-GYNMN----MG----AADKGASDDQ--ISRLPSWRY 269
++S FLL L C ++V+ GY+M MG + K + DQ I LP +R+
Sbjct: 11 TFSITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRF 70
Query: 270 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCP 328
G+ + E EC +CL +++ E +R LP C H FH++CVD WL S CP
Sbjct: 71 ---------GSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCP 121
Query: 329 LCKQELE 335
LC+ ++
Sbjct: 122 LCRYRVD 128
>gi|376335785|gb|AFB32552.1| hypothetical protein 0_15036_01, partial [Abies alba]
gi|376335787|gb|AFB32553.1| hypothetical protein 0_15036_01, partial [Abies alba]
gi|376335789|gb|AFB32554.1| hypothetical protein 0_15036_01, partial [Abies alba]
gi|376335791|gb|AFB32555.1| hypothetical protein 0_15036_01, partial [Abies alba]
gi|376335793|gb|AFB32556.1| hypothetical protein 0_15036_01, partial [Abies alba]
Length = 135
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
A+ G D I+ LPS Y G S +C ICLA++ E E VR LP C+H
Sbjct: 65 ANTGMKDKSINALPSIIY---------GKSVRPELATDCAICLAEFLEGEGVRVLPSCNH 115
Query: 311 MFHLKCVDQWLRILSCCPLC 330
FH++CVD+WLR S CP C
Sbjct: 116 GFHMECVDKWLRSHSSCPTC 135
>gi|395816983|ref|XP_003781958.1| PREDICTED: RING finger protein 44 isoform 2 [Otolemur garnettii]
Length = 351
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPCSH
Sbjct: 269 AKPRGLTKADIEQLPSYRFNP-DSH--------QSEQTLCVVCFSDFEARQLLRVLPCSH 319
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|449680832|ref|XP_002156770.2| PREDICTED: RING finger protein 150-like [Hydra magnipapillata]
Length = 362
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 281 SAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
+A ED C +CL YK+ E +R+LPC H+FH C+D WL CP+CK +
Sbjct: 233 AATHEEDDTCAVCLESYKDGETLRELPCIHLFHKSCIDPWLLYHRTCPMCKSNI 286
>gi|258577977|ref|XP_002543170.1| predicted protein [Uncinocarpus reesii 1704]
gi|237903436|gb|EEP77837.1| predicted protein [Uncinocarpus reesii 1704]
Length = 539
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 56/99 (56%), Gaps = 3/99 (3%)
Query: 238 LISSVLG-YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAK 296
L+SS+LG + + + AS + RL + + N+E G S NE+ C ICL
Sbjct: 422 LLSSLLGPVKPPVASEEDVASAGGLYRLIQYPGSLIAENMEDGTSIRVNENERCLICLCD 481
Query: 297 YKEKEEVRKL-PCSHMFHLKCVDQWLRI-LSCCPLCKQE 333
Y+ +EEVR L C H++H +C+D+WL + CPLC+ E
Sbjct: 482 YEAEEEVRLLAKCRHIYHRECIDEWLTTGRNSCPLCRGE 520
>gi|402467073|gb|EJW02437.1| hypothetical protein EDEG_03141 [Edhazardia aedis USNM 41457]
Length = 244
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%), Gaps = 2/63 (3%)
Query: 272 VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
++ N + G+ D C ICL Y E E+++ LPC H FH+ C+D+W + CPLCK
Sbjct: 174 IEYNKDRGDIG--RHDANCSICLNDYNENEKIKMLPCKHHFHVNCIDEWFNVDDICPLCK 231
Query: 332 QEL 334
+ +
Sbjct: 232 KPI 234
>gi|47215711|emb|CAG04795.1| unnamed protein product [Tetraodon nigroviridis]
Length = 597
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 52/97 (53%), Gaps = 16/97 (16%)
Query: 241 SVLGYNMNMGAAD-KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---CCICLAK 296
++L +G A +G + I +LPS+R+ P N E C +C++
Sbjct: 504 ALLNLAERLGEAKLRGLTKGDIEQLPSYRFN------------PNNHQSEQTLCVVCMSD 551
Query: 297 YKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQE 333
++ ++ +R LPCSH FH KCVD+WLR CP+C+ +
Sbjct: 552 FESRQLLRVLPCSHEFHGKCVDKWLRANRTCPICRAD 588
>gi|26452210|dbj|BAC43193.1| unknown protein [Arabidopsis thaliana]
Length = 241
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 46/86 (53%), Gaps = 9/86 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRKLP-C 308
KG + D + ++P + N+ A+E+ + C +CL ++ E VR LP C
Sbjct: 163 GGSKGLTGDLVEKIPKM-------TITGNNNTDASENTDSCSVCLQDFQLGETVRSLPHC 215
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
HMFHL C+D WL CP+C++++
Sbjct: 216 HHMFHLPCIDNWLLRHGSCPMCRRDI 241
>gi|429963119|gb|ELA42663.1| hypothetical protein VICG_00415 [Vittaforma corneae ATCC 50505]
Length = 174
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 37/49 (75%), Gaps = 1/49 (2%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW-LRILSCCPLCKQE 333
E +C +CL+++K K+ +R+L C H FH KC+D+W L+ SCCPLC++E
Sbjct: 117 ETKDCTVCLSEFKHKQRIRRLDCDHEFHKKCIDKWLLQGNSCCPLCRKE 165
>gi|301614137|ref|XP_002936559.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 165-like
[Xenopus (Silurana) tropicalis]
Length = 351
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 212 ISLLAWNALSYSFPFLLFLLLCCCVPL---------ISSVLGYNMNMGAADKGASDDQIS 262
++ +Y +P L L L P +L +G+ +GA + I
Sbjct: 208 TQMVVHEIRNYPYPQLHLLALQGLSPTRHTSAVRESYEELLQLEDRLGSVSRGAVQNIIE 267
Query: 263 R--LPSWRYKRV--DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
R P KR+ D + ++ D +C ICL+ ++ E+VR+LPC H+FH CVD
Sbjct: 268 RCTFPHKYKKRIPHDGKDAKEDEEESDTDEKCTICLSMLEDGEDVRRLPCMHLFHQVCVD 327
Query: 319 QWLRILSCCPLCKQELE 335
QWL CP+C+ ++E
Sbjct: 328 QWLATSKKCPICRVDIE 344
>gi|237832047|ref|XP_002365321.1| hypothetical protein TGME49_061990 [Toxoplasma gondii ME49]
gi|211962985|gb|EEA98180.1| hypothetical protein TGME49_061990 [Toxoplasma gondii ME49]
Length = 1290
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
+CCIC+ +Y E +R+LPC H FH C+ +W++ S CPLC+ EL R
Sbjct: 1237 DCCICMGEYAVSESLRRLPCMHAFHTSCLRRWIQEKSTCPLCRFELTR 1284
>gi|147903607|ref|NP_001087624.1| E3 ubiquitin-protein ligase arkadia-C [Xenopus laevis]
gi|82198457|sp|Q66J97.1|R111C_XENLA RecName: Full=E3 ubiquitin-protein ligase arkadia-C; AltName:
Full=RING finger protein 111-C
gi|51703448|gb|AAH81009.1| MGC81562 protein [Xenopus laevis]
Length = 967
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 297
+G ++GAS I R +YK+V ++ + + +D +C ICL+
Sbjct: 863 LGNVNRGASQGTIERCTYPHKYKKVSTDWFSQRKLHSKQDGEEAPEEDTEEKCTICLSIL 922
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 923 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 960
>gi|350583447|ref|XP_001925867.3| PREDICTED: E3 ubiquitin-protein ligase RNF115-like, partial [Sus
scrofa]
Length = 259
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS--WRYK 270
S +W+ + +S P +++ +LG N G A ++I+ LP+ +
Sbjct: 118 SPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTITQE 175
Query: 271 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
+VD LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C
Sbjct: 176 QVDKGLE------------CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDACPVC 223
Query: 331 KQEL 334
++ L
Sbjct: 224 RKSL 227
>gi|224104393|ref|XP_002313422.1| predicted protein [Populus trichocarpa]
gi|222849830|gb|EEE87377.1| predicted protein [Populus trichocarpa]
Length = 275
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/104 (30%), Positives = 46/104 (44%), Gaps = 23/104 (22%)
Query: 251 AADKGASDDQISRLPSWRYK-----------------------RVDSNLEAGNSAPANED 287
A+ ++++I+ LP +YK + DS GN + ++
Sbjct: 151 ASTTSMTEEEINALPVHKYKVPVQENGSASLQHASSSSAPAETKQDSKNADGNMKTSEDE 210
Query: 288 PECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
C ICL + E VR LPC H FH C+D WLR CP+CK
Sbjct: 211 LTCTICLEQVNRGELVRSLPCLHQFHTNCIDPWLRQQGTCPVCK 254
>gi|224071365|ref|XP_002303424.1| predicted protein [Populus trichocarpa]
gi|222840856|gb|EEE78403.1| predicted protein [Populus trichocarpa]
Length = 342
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 10/85 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
AA G + I + +YK+ D +E +C +CL++++E E +R LP CS
Sbjct: 114 AATTGVDEALIRSITVCKYKKGDGLIEGT---------DCSVCLSEFEEDESIRLLPKCS 164
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
H FH+ C+D WLR S CPLC+ +
Sbjct: 165 HAFHVPCIDTWLRSHSNCPLCRANI 189
>gi|195638030|gb|ACG38483.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 289
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 277 EAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
EA + A E EC +CLA+ + E R LP C+H FH +C+DQWLR S CPLC+ ++
Sbjct: 105 EAKDDHRAGEALECAVCLAELADGEPARFLPRCAHGFHAECIDQWLRGHSTCPLCRVDV 163
>gi|226503579|ref|NP_001141538.1| uncharacterized protein LOC100273652 [Zea mays]
gi|194704976|gb|ACF86572.1| unknown [Zea mays]
gi|414587073|tpg|DAA37644.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 289
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 277 EAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
EA + A E EC +CLA+ + E R LP C+H FH +C+DQWLR S CPLC+ ++
Sbjct: 105 EAKDDHRAGEALECAVCLAELADGEPARFLPRCAHGFHAECIDQWLRGHSTCPLCRVDV 163
>gi|395505163|ref|XP_003756914.1| PREDICTED: RING finger protein 44 isoform 1 [Sarcophilus harrisii]
Length = 438
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 356 AKPRGLTKADIEQLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 406
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 407 EFHAKCVDKWLKANRTCPICRAD 429
>gi|414866068|tpg|DAA44625.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 280
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 41/80 (51%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
G S +S S + D G S P+ ++ C +CL + + +R LPC H FH+
Sbjct: 183 GPSQLSVSSTGSGNEVKQDGLKADGTSKPSEDELTCSVCLEQVTVGDLLRSLPCLHQFHV 242
Query: 315 KCVDQWLRILSCCPLCKQEL 334
C+D WLR CP+CK ++
Sbjct: 243 NCIDPWLRQQGTCPICKHQV 262
>gi|347965741|ref|XP_321788.3| AGAP001358-PA [Anopheles gambiae str. PEST]
gi|333470373|gb|EAA43207.3| AGAP001358-PA [Anopheles gambiae str. PEST]
Length = 778
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 9/81 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + +I +LPS+++ ++ G+ C +C+ ++ ++ +R LPCSH
Sbjct: 694 AKPRGLARPEIDQLPSYKF---NAETHTGDQT------SCVVCMCDFEARQILRVLPCSH 744
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FH KCVD+WLR CP+C+
Sbjct: 745 EFHAKCVDKWLRSNRTCPICR 765
>gi|259155278|ref|NP_001158881.1| E3 ubiquitin-protein ligase RNF167 precursor [Salmo salar]
gi|223647828|gb|ACN10672.1| E3 ubiquitin-protein ligase RNF167 precursor [Salmo salar]
Length = 403
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 13/81 (16%)
Query: 257 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
+ +Q+ R+P ++ + D E C ICL +Y+E +++R LPCSH +H KC
Sbjct: 220 TKEQLKRIPIHKFTKGD------------EYDVCAICLDEYEEGDKLRVLPCSHAYHSKC 267
Query: 317 VDQWLR-ILSCCPLCKQELER 336
VD WL CP+CKQ + R
Sbjct: 268 VDPWLTGTKKTCPVCKQRVTR 288
>gi|221506522|gb|EEE32139.1| RING finger protein 6/12/38, putative [Toxoplasma gondii VEG]
Length = 1213
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/48 (47%), Positives = 33/48 (68%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELER 336
+CCIC+ +Y E +R+LPC H FH C+ +W++ S CPLC+ EL R
Sbjct: 1160 DCCICMGEYAVSESLRRLPCMHAFHTSCLRRWIQEKSTCPLCRFELTR 1207
>gi|395816981|ref|XP_003781957.1| PREDICTED: RING finger protein 44 isoform 1 [Otolemur garnettii]
Length = 432
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPCSH
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCSH 400
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|390356327|ref|XP_001181593.2| PREDICTED: RING finger protein 215-like [Strongylocentrotus
purpuratus]
Length = 428
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 5/74 (6%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+S++ W+YKR A +S + C +CL ++ + + +R LPC H FH +CVD W
Sbjct: 308 LSKMSVWKYKRKKYEFSASDSMDS-----CAVCLEEFFKGQTIRMLPCHHTFHNRCVDSW 362
Query: 321 LRILSCCPLCKQEL 334
L CPLCK ++
Sbjct: 363 LIRKRTCPLCKMDI 376
>gi|358337630|dbj|GAA33104.2| RING finger protein 38 [Clonorchis sinensis]
Length = 1239
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 44/83 (53%), Gaps = 3/83 (3%)
Query: 254 KGASDDQISRLPSWRYKRVD---SNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
+G + +++ LP Y ++ + E A D C ICL Y+ K+ +R + C H
Sbjct: 1145 RGLTKEELDTLPVRSYGKIHEAPTQHENTKDCVAETDDRCMICLDDYESKDLLRAMRCRH 1204
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CPLC+ +
Sbjct: 1205 EFHAKCVDKWLKTKRTCPLCRAD 1227
>gi|299471057|emb|CBN78917.1| protein binding / ubiquitin-protein ligase/ zinc ion binding
[Ectocarpus siliculosus]
Length = 235
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 11/79 (13%)
Query: 255 GASDDQISRLPSWRYKR--VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMF 312
GAS+ +I R PS+ DS ++ N C ICL +K +E VR +PC H F
Sbjct: 161 GASEGEIRRNPSFVIPEPAADSVVKPKN---------CSICLYPFKPRERVRIIPCLHQF 211
Query: 313 HLKCVDQWLRILSCCPLCK 331
H +C+D WLR + CP+CK
Sbjct: 212 HTECIDPWLRQNAICPVCK 230
>gi|226500022|ref|NP_001146938.1| RING-H2 finger protein ATL2A [Zea mays]
gi|195605428|gb|ACG24544.1| RING-H2 finger protein ATL2A [Zea mays]
Length = 212
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 44/87 (50%), Gaps = 9/87 (10%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP- 307
M A KG + +LP+ + E G E PEC ICLA++ +EVR LP
Sbjct: 80 MPAPRKGVDRAALEKLPTVPFA-----FEEGQD---GERPECAICLAEFAPGDEVRVLPP 131
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C+H FH CVD WL S CP C+ L
Sbjct: 132 CAHAFHAACVDTWLLCTSTCPSCRTAL 158
>gi|440900640|gb|ELR51723.1| E3 ubiquitin-protein ligase RNF6 [Bos grunniens mutus]
Length = 667
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 230 LLLCCCVPLISSVLGYNMNMGAADK---GASDDQISRLPSWRYKRVDSNLEAGNSAPANE 286
L+ +P++ + +N G D G + +QI L + Y+ ++ E G +
Sbjct: 559 LVETGTLPILRLAHFFLLNEGDDDDPTHGLTKEQIDNLSTRNYEHSGADGEPGKA----- 613
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C++ Y ++R+LPC H FH+ C+D+WL CP+C+Q
Sbjct: 614 ---CSVCISDYVAGNKLRQLPCMHEFHIHCIDRWLSENCTCPVCRQ 656
>gi|15233745|ref|NP_192652.1| putative RING-H2 finger protein ATL37 [Arabidopsis thaliana]
gi|68565317|sp|Q9M0R4.1|ATL37_ARATH RecName: Full=Putative RING-H2 finger protein ATL37; Flags:
Precursor
gi|7267556|emb|CAB78037.1| putative protein [Arabidopsis thaliana]
gi|332657325|gb|AEE82725.1| putative RING-H2 finger protein ATL37 [Arabidopsis thaliana]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 53/102 (51%), Gaps = 8/102 (7%)
Query: 234 CCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCIC 293
CC+ + G+ + +G D I P++ Y V + + GN EC IC
Sbjct: 71 CCIEE-NETGGHEVLHSRVRRGIDKDVIESFPAFLYSEVKA-FKIGNGGV-----ECAIC 123
Query: 294 LAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
L +++++E +R +P CSH FH C+D+WL S CP+C+ L
Sbjct: 124 LCEFEDEEPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANL 165
>gi|358249356|ref|NP_001239785.1| uncharacterized protein LOC100805406 [Glycine max]
gi|255645197|gb|ACU23096.1| unknown [Glycine max]
Length = 274
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 270 KRVDSNLEAGNSAPANEDP-ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCP 328
K+ EAG A +ED C ICL + K E VR LPC H FH C+D WLR CP
Sbjct: 193 KQASGGTEAG--AKGSEDELTCTICLDQVKRGELVRSLPCLHQFHANCIDPWLRQQGTCP 250
Query: 329 LCK 331
+CK
Sbjct: 251 VCK 253
>gi|449456847|ref|XP_004146160.1| PREDICTED: NEP1-interacting protein 1-like [Cucumis sativus]
gi|449533956|ref|XP_004173936.1| PREDICTED: NEP1-interacting protein 1-like [Cucumis sativus]
Length = 235
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 44/83 (53%), Gaps = 9/83 (10%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRKLP-CSHM 311
KG D + ++P + NS A + CC +CL ++ E VR LP C HM
Sbjct: 160 KGLPGDSVEKIPKIVVSK-------NNSVDAYGERVCCSVCLQDFQLGETVRSLPYCHHM 212
Query: 312 FHLKCVDQWLRILSCCPLCKQEL 334
FHL C+D+WL CPLC+++L
Sbjct: 213 FHLPCIDKWLLTHGSCPLCRRDL 235
>gi|413968522|gb|AFW90598.1| E3 ubiquitin ligase [Solanum tuberosum]
Length = 170
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 47/85 (55%), Gaps = 7/85 (8%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
+A+KG + LP + Y + A +A EC ICLA+Y +E+R LP C
Sbjct: 49 SANKGLKKKVLQSLPKFTYDPSSTANGAAFTA------ECAICLAEYAVGDEIRVLPQCG 102
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
H+FHL+C+D WL S CP C+Q L
Sbjct: 103 HIFHLQCIDTWLGSHSSCPSCRQIL 127
>gi|226504274|ref|NP_001148220.1| RING-H2 finger protein ATL2M [Zea mays]
gi|195616772|gb|ACG30216.1| RING-H2 finger protein ATL2M [Zea mays]
gi|224035457|gb|ACN36804.1| unknown [Zea mays]
gi|414585838|tpg|DAA36409.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 198
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 319
I+ +P+ +Y N EA NS +D +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 67 IAAIPTMKY-----NCEAFNS---KDDVQCSICLGEYREKEILRIIPTCRHSFHLACLDL 118
Query: 320 WLRILSCCPLCKQELE 335
WL + CP+C+ LE
Sbjct: 119 WLEKQTTCPICRVSLE 134
>gi|413943009|gb|AFW75658.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
D G D I LP + Y+ V G A A E +C +CL ++ ++ +R LP C H
Sbjct: 115 DAGLDQDVIDALPVFLYREV-----VGAGAGAKEPFDCAVCLCEFAGEDRLRLLPLCGHA 169
Query: 312 FHLKCVDQWLRILSCCPLCK 331
FH+ C+D WL S CPLC+
Sbjct: 170 FHIGCIDTWLLSNSTCPLCR 189
>gi|356538405|ref|XP_003537694.1| PREDICTED: RING-H2 finger protein ATL8-like [Glycine max]
Length = 226
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 61/131 (46%), Gaps = 25/131 (19%)
Query: 220 LSYSFPFLLFLLLC---CCVPLIS----------SVLGYNMNMGAADKGASDDQISRLPS 266
L F +L LLC C V L++ S G + A+KG + LP
Sbjct: 29 LESDFVVILAALLCALICVVGLVAVARCAWLRRGSGAGNSPRQALANKGLKKKVLQSLPK 88
Query: 267 WRYKRVDSNLEAGNSAPAN--EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRI 323
+ Y VDSN P+ EC ICLA++ +E+R LP C H FH+ C+D WL
Sbjct: 89 FAY--VDSN-------PSKWLATSECAICLAEFAAGDEIRVLPQCGHGFHVPCIDTWLGS 139
Query: 324 LSCCPLCKQEL 334
S CP C+Q L
Sbjct: 140 HSSCPSCRQVL 150
>gi|449487766|ref|XP_004157790.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
Length = 206
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 13/90 (14%)
Query: 244 GYN--MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKE 301
GY+ + + +A + A + I LP +R K V ++ EC ICL ++
Sbjct: 56 GYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGN 104
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
EVR +PC+H FH++C+D+WLR+ CP C+
Sbjct: 105 EVRGMPCAHNFHVECIDEWLRLNVKCPRCR 134
>gi|355716731|gb|AES05704.1| ring finger protein 111 [Mustela putorius furo]
Length = 992
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|357130197|ref|XP_003566737.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Brachypodium
distachyon]
Length = 382
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A + A + I LP + K V ++ EC ICL +++ EVR
Sbjct: 201 GLYLTTAQREAVEALIQELPKFMLKAVPTDCS-----------ECPICLEEFRVGNEVRG 249
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 250 LPCAHNFHVECIDQWLRLNVKCPRCR 275
>gi|348555449|ref|XP_003463536.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 1
[Cavia porcellus]
Length = 992
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 297
+G ++GAS I R +YK+V ++ + + + + +C ICL+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEATEEDTEEKCTICLSIL 947
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|218198816|gb|EEC81243.1| hypothetical protein OsI_24310 [Oryza sativa Indica Group]
Length = 540
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 52/91 (57%), Gaps = 3/91 (3%)
Query: 242 VLGYNMNMGAADKGASDDQISR-LPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEK 300
+L +G+ SD+Q+ + L YK +S+LEA + +D +C IC +Y E
Sbjct: 439 LLALEERIGSVSTALSDEQLVKCLKRNVYKLPNSDLEANRAVL--DDAKCSICQEEYIEG 496
Query: 301 EEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
EEV ++ C H +H+ C+ +WLR + CP+CK
Sbjct: 497 EEVGRMQCEHQYHVPCIHEWLRQKNWCPICK 527
>gi|414875730|tpg|DAA52861.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 511
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 2/73 (2%)
Query: 264 LPSWRYKRVDSNLEAGNSAPANED-PECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWL 321
+ ++R + D + + S A +C +CL++ + E+VR LP CSH+FH+ C+D WL
Sbjct: 116 VATYRVRGADDDGPSSASDGAGTGTADCAVCLSELADGEKVRALPGCSHVFHVDCIDAWL 175
Query: 322 RILSCCPLCKQEL 334
R + CP+C+ E+
Sbjct: 176 RSRTTCPVCRAEV 188
>gi|449506660|ref|XP_004162811.1| PREDICTED: RING-H2 finger protein ATL43-like [Cucumis sativus]
Length = 391
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/127 (33%), Positives = 65/127 (51%), Gaps = 21/127 (16%)
Query: 221 SYSFPFLLFLLLCCCVPLISSVL-GYNMN----MG----AADKGASDDQ--ISRLPSWRY 269
++S FLL L C ++V+ GY+M MG + K + DQ I LP +R+
Sbjct: 89 TFSITFLLLLYAKHCKRGNAAVVVGYSMRPNTMMGVPSFSTRKNSGIDQTVIESLPIFRF 148
Query: 270 KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCP 328
G+ + E EC +CL +++ E +R LP C H FH++CVD WL S CP
Sbjct: 149 ---------GSLSGQKEGLECAVCLNRFEPTEVLRLLPKCKHAFHVECVDTWLDAHSTCP 199
Query: 329 LCKQELE 335
LC+ ++
Sbjct: 200 LCRYRVD 206
>gi|449469529|ref|XP_004152472.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like isoform 1 [Cucumis
sativus]
Length = 348
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 244 GYN--MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKE 301
GY+ + + +A + A + I LP +R K V ++ EC ICL ++
Sbjct: 198 GYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGN 246
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
EVR +PC+H FH++C+D+WLR+ CP C+ +
Sbjct: 247 EVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSV 279
>gi|413948715|gb|AFW81364.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 346
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 54/115 (46%), Gaps = 10/115 (8%)
Query: 222 YSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNS 281
+S FL+ + C P SS G I LP +R+ +
Sbjct: 3 FSLTFLVLMYAKFCHPSGSSSTNGAAAAAVCSVGVPKQVIQSLPFFRFATLRG------- 55
Query: 282 APANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
A + EC +CLA++ + + +R LP C H FHL CVD+WL+ + CPLC+ ++
Sbjct: 56 --ARQGMECSVCLARFDDADLLRLLPRCRHAFHLHCVDRWLQSNASCPLCRTSVD 108
>gi|22327588|ref|NP_199342.2| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|58652066|gb|AAW80858.1| At5g45290 [Arabidopsis thaliana]
gi|58652090|gb|AAW80870.1| At5g45290 [Arabidopsis thaliana]
gi|332007844|gb|AED95227.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 545
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 285 NEDP-ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 334
+EDP +C ICL +Y+E + +R LPC H FH CVD+WL+ I CPLC+ ++
Sbjct: 484 SEDPSQCYICLVEYEEADSIRTLPCHHEFHKTCVDKWLKEIHRVCPLCRGDI 535
>gi|168027185|ref|XP_001766111.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682754|gb|EDQ69170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 286
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 42/75 (56%), Gaps = 8/75 (10%)
Query: 260 QISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
+ LP++ +K S+ EAG C ICL Y+ E++R LPC H FH+ C+DQ
Sbjct: 161 DVDALPTFVFKGAGSD-EAGTGE------TCAICLEDYESGEKLRHLPCHHDFHVGCIDQ 213
Query: 320 WLRILSC-CPLCKQE 333
WL CP+CKQ+
Sbjct: 214 WLLTRKPFCPICKQD 228
>gi|358414165|ref|XP_003582764.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 1 [Bos
taurus]
Length = 628
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 532 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 591
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 592 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 621
>gi|330792054|ref|XP_003284105.1| hypothetical protein DICPUDRAFT_75082 [Dictyostelium purpureum]
gi|325085919|gb|EGC39317.1| hypothetical protein DICPUDRAFT_75082 [Dictyostelium purpureum]
Length = 204
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 255 GASDDQISRLPSWRYKR---VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHM 311
GA +QI LP + +D+ L +G+S + C ICL ++ + +R LPC H
Sbjct: 119 GAKKEQIDLLPIHHIENQQDLDTFLNSGSSKDLQQ-KVCSICLDEFVVNDLIRTLPCIHH 177
Query: 312 FHLKCVDQWLRILSCCPLCKQEL 334
+H C+++WL+I S CP+CK E+
Sbjct: 178 YHSDCIEKWLKIKSVCPVCKYEV 200
>gi|297819412|ref|XP_002877589.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323427|gb|EFH53848.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 358
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 44/86 (51%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A A + I LP +R K V + EC ICL ++ EVR
Sbjct: 202 GLYLTPAQAEAVEALIQELPKFRLKAVPDDCG-----------ECLICLEEFHIGHEVRG 250
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCR 276
>gi|302755532|ref|XP_002961190.1| hypothetical protein SELMODRAFT_65861 [Selaginella moellendorffii]
gi|302766788|ref|XP_002966814.1| hypothetical protein SELMODRAFT_65866 [Selaginella moellendorffii]
gi|300164805|gb|EFJ31413.1| hypothetical protein SELMODRAFT_65866 [Selaginella moellendorffii]
gi|300172129|gb|EFJ38729.1| hypothetical protein SELMODRAFT_65861 [Selaginella moellendorffii]
Length = 293
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A + A + I +LP ++ KRV + E C ICL + EVR
Sbjct: 202 GLTLTPAQREAVESLIQQLPKFQLKRVPT-----------ECSSCSICLEDFTVGTEVRG 250
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH+ C+D+WLR+ CP C+
Sbjct: 251 LPCAHNFHVDCIDEWLRLNVKCPQCR 276
>gi|226529223|ref|NP_001146218.1| uncharacterized protein LOC100279788 precursor [Zea mays]
gi|219886227|gb|ACL53488.1| unknown [Zea mays]
Length = 357
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 43/80 (53%), Gaps = 6/80 (7%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
D G D I LP + Y+ V G A A E +C +CL ++ ++ +R LP C H
Sbjct: 115 DAGLDQDVIDALPVFLYREV-----VGAGAGAKEPFDCAVCLCEFAGEDRLRLLPLCGHA 169
Query: 312 FHLKCVDQWLRILSCCPLCK 331
FH+ C+D WL S CPLC+
Sbjct: 170 FHIGCIDTWLLSNSTCPLCR 189
>gi|30692957|ref|NP_190382.2| E3 ubiquitin-protein ligase SIS3 [Arabidopsis thaliana]
gi|302595901|sp|Q8GYT9.2|SIS3_ARATH RecName: Full=E3 ubiquitin-protein ligase SIS3; AltName:
Full=Protein SUGAR INSENSITIVE 3; Flags: Precursor
gi|332644833|gb|AEE78354.1| E3 ubiquitin-protein ligase SIS3 [Arabidopsis thaliana]
Length = 358
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 202 GLYLTPAQTEAVEALIQELPKFRLKAV-----------PDDCGECLICLEEFHIGHEVRG 250
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCR 276
>gi|156354054|ref|XP_001623218.1| predicted protein [Nematostella vectensis]
gi|156209895|gb|EDO31118.1| predicted protein [Nematostella vectensis]
Length = 95
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 45/73 (61%), Gaps = 9/73 (12%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G S + I R+PS+R+ + ++ G+ C +C+ Y +E++RKLPC+H
Sbjct: 32 AKSRGLSKEVIDRIPSFRFSASNKDMSNGS---------CVVCMMDYTNREKLRKLPCNH 82
Query: 311 MFHLKCVDQWLRI 323
FH KC+D+WL++
Sbjct: 83 DFHSKCIDRWLKV 95
>gi|17978924|gb|AAL47429.1| AT5g45290/K9E15_7 [Arabidopsis thaliana]
Length = 545
Score = 62.8 bits (151), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/52 (50%), Positives = 37/52 (71%), Gaps = 2/52 (3%)
Query: 285 NEDP-ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 334
+EDP +C ICL +Y+E + +R LPC H FH CVD+WL+ I CPLC+ ++
Sbjct: 484 SEDPSQCYICLVEYEEADSIRALPCHHEFHKTCVDKWLKEIHRVCPLCRGDI 535
>gi|410961147|ref|XP_003987146.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Felis
catus]
Length = 994
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 898 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 957
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 958 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|426233216|ref|XP_004010613.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Ovis
aries]
Length = 995
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|395505165|ref|XP_003756915.1| PREDICTED: RING finger protein 44 isoform 2 [Sarcophilus harrisii]
Length = 350
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 268 AKPRGLTKADIEQLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 318
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 319 EFHAKCVDKWLKANRTCPICRAD 341
>gi|393903772|gb|EFO19573.2| hypothetical protein LOAG_08919 [Loa loa]
Length = 508
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
KG + ++I +L S+R +E C IC +++++ VR LPC+H FH
Sbjct: 364 KGMTKNEIDQLKSFRVTDPALLMEK----------VCVICQCDFEKRDLVRMLPCAHHFH 413
Query: 314 LKCVDQWLRILSCCPLCKQ 332
LKC+D+WLR CP+C+Q
Sbjct: 414 LKCIDKWLRGNRTCPICRQ 432
>gi|50949391|emb|CAB75669.2| hypothetical protein [Homo sapiens]
Length = 178
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 82 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 141
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 142 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 171
>gi|26449875|dbj|BAC42060.1| unknown protein [Arabidopsis thaliana]
Length = 358
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 202 GLYLTPAQTEAVEALIQELPKFRLKAV-----------PDDCGECLICLEEFHIGHEVRG 250
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+DQWLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDQWLRLNVKCPRCR 276
>gi|332235798|ref|XP_003267091.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Nomascus
leucogenys]
Length = 995
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|212723708|ref|NP_001131721.1| uncharacterized protein LOC100193086 [Zea mays]
gi|195653067|gb|ACG46001.1| zinc finger, C3HC4 type family protein [Zea mays]
Length = 249
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G KG + I+ LP+ YK G + + EC IC YK ++ + KLPC
Sbjct: 169 IGTQSKGLPESVIALLPTSTYK-------TGIFSRKEKHDECVICCMAYKNRDRLTKLPC 221
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H CV +WL+I CP+C +E+
Sbjct: 222 GHHYHQACVAKWLQINKVCPVCNKEV 247
>gi|168066815|ref|XP_001785327.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162663082|gb|EDQ49868.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 80
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 286 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
ED EC +CL K+ E E +R LP CSH+FH +C+D W S CPLC+ L+
Sbjct: 28 EDLECAVCLEKFNEDEALRLLPQCSHVFHTECIDLWFHSHSTCPLCRMSLK 78
>gi|395822251|ref|XP_003784435.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Otolemur
garnettii]
Length = 993
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|357128092|ref|XP_003565710.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Brachypodium
distachyon]
Length = 246
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 35/48 (72%), Gaps = 1/48 (2%)
Query: 289 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C +CLA++++ EE R LP C H FH++C+D W R S CPLC+ +++
Sbjct: 146 DCAVCLAEFEQGEEARALPRCGHRFHVECIDAWFRGNSTCPLCRADVQ 193
>gi|312084983|ref|XP_003144497.1| hypothetical protein LOAG_08919 [Loa loa]
Length = 514
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 45/79 (56%), Gaps = 10/79 (12%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
KG + ++I +L S+R +E C IC +++++ VR LPC+H FH
Sbjct: 370 KGMTKNEIDQLKSFRVTDPALLMEK----------VCVICQCDFEKRDLVRMLPCAHHFH 419
Query: 314 LKCVDQWLRILSCCPLCKQ 332
LKC+D+WLR CP+C+Q
Sbjct: 420 LKCIDKWLRGNRTCPICRQ 438
>gi|413937169|gb|AFW71720.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 226
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 44/84 (52%), Gaps = 5/84 (5%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
A GA + +P+ Y L+A P C ICLA+ + E VR LP C+H
Sbjct: 107 AQAGARRKALRAMPTLVYSAGLLPLQAAGGG----GPVCAICLAELEPGERVRVLPKCNH 162
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
FH++CVD+WL S CP C+Q L
Sbjct: 163 GFHVRCVDRWLLARSTCPTCRQPL 186
>gi|357165351|ref|XP_003580354.1| PREDICTED: uncharacterized protein LOC100831396 [Brachypodium
distachyon]
Length = 252
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/87 (37%), Positives = 46/87 (52%), Gaps = 9/87 (10%)
Query: 249 MGAADKGASDDQISRLPSWRYK-RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+G KG DD I L S YK R+ S E + EC IC YK ++++ LP
Sbjct: 171 IGTESKGLPDDMIMLLKSSTYKIRIFSRKEKHD--------ECVICCMAYKNRDKLTTLP 222
Query: 308 CSHMFHLKCVDQWLRILSCCPLCKQEL 334
C H +H CV +WL+I CP+C +E+
Sbjct: 223 CEHQYHQICVTKWLKINKVCPVCNKEV 249
>gi|334311222|ref|XP_001380922.2| PREDICTED: RING finger protein 44-like [Monodelphis domestica]
Length = 395
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 313 AKPRGLTKADIEQLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 363
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 364 EFHAKCVDKWLKANRTCPICRAD 386
>gi|397515419|ref|XP_003827949.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Pan
paniscus]
Length = 993
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|301628324|ref|XP_002943307.1| PREDICTED: RING finger protein 44-like [Xenopus (Silurana)
tropicalis]
Length = 430
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 348 AKPRGLTKANIEQLPSYRF-----NAESHQS----EQTLCVVCFSDFESRQLLRVLPCNH 398
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 399 EFHAKCVDKWLKSNRTCPICRAD 421
>gi|242081951|ref|XP_002445744.1| hypothetical protein SORBIDRAFT_07g024950 [Sorghum bicolor]
gi|241942094|gb|EES15239.1| hypothetical protein SORBIDRAFT_07g024950 [Sorghum bicolor]
Length = 314
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 47/89 (52%), Gaps = 14/89 (15%)
Query: 249 MGAADKGASDDQISRLPSWRY---KRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G KG + D I+ LPS Y + D N+E +C IC ++ E E +
Sbjct: 226 VGTESKGLAADTIASLPSVTYHAQDKQDGNME-----------QCVICRVEFDEGESLVA 274
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
LPC H +H +C++QWL++ CP+C E+
Sbjct: 275 LPCKHPYHSECINQWLQLNKVCPMCSAEV 303
>gi|335279602|ref|XP_003353383.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sus scrofa]
Length = 993
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|426379251|ref|XP_004056315.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Gorilla
gorilla gorilla]
Length = 995
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|222617002|gb|EEE53134.1| hypothetical protein OsJ_35938 [Oryza sativa Japonica Group]
Length = 162
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 313
G++ + I +P++ Y+R S +C +C+A K+ + VR+LP C H FH
Sbjct: 74 GSAQEDIEAIPAFEYRRGSSGSGVA---------QCAVCIAAVKDGDTVRRLPACGHAFH 124
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
CVD WLR + CP+C+ ++
Sbjct: 125 APCVDGWLRDHATCPMCRADV 145
>gi|119597961|gb|EAW77555.1| ring finger protein 111, isoform CRA_b [Homo sapiens]
gi|119597966|gb|EAW77560.1| ring finger protein 111, isoform CRA_b [Homo sapiens]
Length = 917
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 821 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 880
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 881 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 910
>gi|118084993|ref|XP_417129.2| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Gallus gallus]
Length = 672
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/79 (35%), Positives = 45/79 (56%), Gaps = 5/79 (6%)
Query: 258 DDQISRLPSWRYKRVDSNLEAGNSAPANEDPE----CCICLAKYKEKEEVRKLPCSHMFH 313
DD+ RL +++D NL N + + E C +C+ +Y ++R+LPC H FH
Sbjct: 584 DDEDERLRGLTKEQID-NLSTRNYGDIHTEEEISKTCSVCINEYVTGNKLRQLPCMHEFH 642
Query: 314 LKCVDQWLRILSCCPLCKQ 332
+ C+D+WL S CP+C+Q
Sbjct: 643 IHCIDRWLSENSTCPICRQ 661
>gi|388495346|gb|AFK35739.1| unknown [Lotus japonicus]
Length = 249
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 34/61 (55%)
Query: 271 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
+ DS G+ + ++ C ICL K E VR LPC H FH C+DQWLR CP+C
Sbjct: 168 KQDSEGAEGSIKVSVDELTCTICLEHVKRGELVRNLPCLHQFHANCIDQWLRQQGTCPVC 227
Query: 331 K 331
K
Sbjct: 228 K 228
>gi|293332277|ref|NP_001168249.1| uncharacterized LOC100382012 [Zea mays]
gi|223947011|gb|ACN27589.1| unknown [Zea mays]
gi|413938289|gb|AFW72840.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 185
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 44/85 (51%), Gaps = 8/85 (9%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
AA++G + + LP+ Y E G EC ICLA+++ + VR LP C
Sbjct: 66 AANRGVKKEVLRSLPTVTYVSDSGKAEGGAD-------ECAICLAEFEGGQAVRVLPQCG 118
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
H FH CVD WLR S CP C++ L
Sbjct: 119 HAFHAACVDTWLRAHSSCPSCRRVL 143
>gi|395455081|ref|NP_001257457.1| E3 ubiquitin-protein ligase Arkadia isoform 1 [Homo sapiens]
gi|119597967|gb|EAW77561.1| ring finger protein 111, isoform CRA_f [Homo sapiens]
Length = 995
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|109081311|ref|XP_001098035.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 3 [Macaca
mulatta]
Length = 993
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 897 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 956
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 957 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|307136233|gb|ADN34069.1| protein binding protein [Cucumis melo subsp. melo]
Length = 275
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 22/97 (22%)
Query: 257 SDDQISRLPSWRYK----------------------RVDSNLEAGNSAPANEDPECCICL 294
S++QI+ LP +YK R DS G++ + ++ C +CL
Sbjct: 159 SEEQINALPVHKYKVSGPQSDSSVNQQASSSESNEKRQDSVNAVGSTKTSEDELTCSVCL 218
Query: 295 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ E +R LPC H FH C+D WLR CP+CK
Sbjct: 219 EQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 255
>gi|297737435|emb|CBI26636.3| unnamed protein product [Vitis vinifera]
Length = 264
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/91 (37%), Positives = 49/91 (53%), Gaps = 12/91 (13%)
Query: 245 YNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVR 304
YN+ + KG + I +LP SN N+ NE C ICL +K+ E R
Sbjct: 181 YNI---SGAKGLPHNFIEKLP-------KSNFCHSNAEMYNE-ISCTICLQDFKDGEMTR 229
Query: 305 KLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
LP C H FH++CVDQWL + CP+C++++
Sbjct: 230 GLPSCRHYFHMECVDQWLTLHGSCPMCRKDV 260
>gi|194692338|gb|ACF80253.1| unknown [Zea mays]
Length = 249
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G KG + I+ LP+ YK G + + EC IC YK ++ + KLPC
Sbjct: 169 IGTQSKGLPESVIALLPTSTYK-------TGIFSRKEKHDECVICCMAYKNRDRLTKLPC 221
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H CV +WL+I CP+C +E+
Sbjct: 222 GHHYHQACVAKWLQINKVCPVCNKEV 247
>gi|348516947|ref|XP_003445998.1| PREDICTED: E3 ubiquitin-protein ligase RNF12-A-like [Oreochromis
niloticus]
Length = 675
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 621 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 663
>gi|224043224|ref|XP_002192257.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 [Taeniopygia guttata]
Length = 664
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 44/80 (55%), Gaps = 10/80 (12%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE-DPECCICLAKYKEKEEVRKLPCSHMF 312
+G + +QI L + Y G+ NE C +C+ +Y ++R+LPC+H F
Sbjct: 583 RGLTKEQIDNLSTRNY---------GDVHTENEWSKTCSVCINEYATGNKLRQLPCAHEF 633
Query: 313 HLKCVDQWLRILSCCPLCKQ 332
H+ C+D+WL S CP+C+Q
Sbjct: 634 HIHCIDRWLSENSTCPICRQ 653
>gi|326435222|gb|EGD80792.1| hypothetical protein PTSG_01380 [Salpingoeca sp. ATCC 50818]
Length = 341
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 4/51 (7%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK----QELER 336
C +CL +++E + VR+LPC H+FH++C+D+WL+ + CP C+ EL+R
Sbjct: 283 CAVCLQQFEENQHVRRLPCRHVFHVECIDEWLQSVPTCPTCRSNITDELDR 333
>gi|238015284|gb|ACR38677.1| unknown [Zea mays]
gi|414585839|tpg|DAA36410.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 168
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 47/76 (61%), Gaps = 9/76 (11%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 319
I+ +P+ +Y N EA NS +D +C ICL +Y+EKE +R +P C H FHL C+D
Sbjct: 37 IAAIPTMKY-----NCEAFNS---KDDVQCSICLGEYREKEILRIIPTCRHSFHLACLDL 88
Query: 320 WLRILSCCPLCKQELE 335
WL + CP+C+ LE
Sbjct: 89 WLEKQTTCPICRVSLE 104
>gi|168020812|ref|XP_001762936.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162685748|gb|EDQ72141.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 286
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/82 (37%), Positives = 45/82 (54%), Gaps = 9/82 (10%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
G S +++ LPS+ +K ++ G S C ICL Y E++R LPC H FHL
Sbjct: 197 GMSVKEVNTLPSFVFKHIEDG--KGTSE------TCAICLEDYVAGEKLRLLPCQHEFHL 248
Query: 315 KCVDQWLRILS-CCPLCKQELE 335
C+DQWL CP+CK++ +
Sbjct: 249 DCIDQWLTTRKPFCPVCKRDAQ 270
>gi|116283986|gb|AAH17878.1| RNF13 protein [Homo sapiens]
Length = 291
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 63/125 (50%), Gaps = 14/125 (11%)
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGAS-DDQISRLPS 266
H++ + + Y PFL+ + +C + +I + + + A + DQ+ +LP
Sbjct: 169 HLILVPEFSLPLEYYLIPFLIIVGICLILIVIFMITKFVQDRHRARRNRLRKDQLKKLPV 228
Query: 267 WRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL-RILS 325
++K+ D E C ICL +Y++ +++R LPCSH +H KCVD WL +
Sbjct: 229 HKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVDPWLTKTKK 276
Query: 326 CCPLC 330
CP+C
Sbjct: 277 TCPVC 281
>gi|18417809|ref|NP_567877.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
gi|15983462|gb|AAL11599.1|AF424605_1 AT4g31450/F3L17_20 [Arabidopsis thaliana]
gi|25141205|gb|AAN73297.1| At4g31450/F3L17_20 [Arabidopsis thaliana]
gi|332660515|gb|AEE85915.1| RING/U-box domain-containing protein [Arabidopsis thaliana]
Length = 497
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
ED +C IC +Y +EV +L C H +H+KCV +WLRI S CP+CK E
Sbjct: 444 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAE 493
>gi|344293339|ref|XP_003418381.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Loxodonta africana]
Length = 984
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSVLEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|126277147|ref|XP_001368075.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 1
[Monodelphis domestica]
Length = 982
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 886 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 945
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 946 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 975
>gi|297809223|ref|XP_002872495.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297318332|gb|EFH48754.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 237
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 50/90 (55%), Gaps = 11/90 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
N N+ A+ G S D LP YK + +D +C +CLA Y+ +E++++
Sbjct: 77 NNNLSTAELGLSKDVREMLPIVIYKE----------SFTVKDSQCSVCLADYQAEEKLQQ 126
Query: 306 LP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+P C H FH++C+D+WL + CPLC+ L
Sbjct: 127 MPACGHTFHMECIDRWLTSHTTCPLCRLSL 156
>gi|145531749|ref|XP_001451641.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419296|emb|CAK84244.1| unnamed protein product [Paramecium tetraurelia]
Length = 469
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 56/100 (56%), Gaps = 9/100 (9%)
Query: 238 LISSVLGYNMNMG-AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP-ECCICLA 295
L+++ + N N + G D +I +LP + NLE +ED +C ICL
Sbjct: 376 LLNTFIQLNENGTIEGNLGCEDHEIQQLPVRKI-----NLEQ--VKQLDEDHMKCLICLC 428
Query: 296 KYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+Y+E++ V+ +PC H FH C+++WL+ CP+CK ELE
Sbjct: 429 EYEEEDLVKTIPCLHYFHDDCIEKWLKKSRHCPICKNELE 468
>gi|410961151|ref|XP_003987148.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Felis
catus]
Length = 985
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|224143609|ref|XP_002325015.1| predicted protein [Populus trichocarpa]
gi|222866449|gb|EEF03580.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/81 (37%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 313
G I LP +R+ + + E EC +CL+K+++ E +R LP C H FH
Sbjct: 91 GIDKTVIESLPFFRFTSLKG---------SREGLECAVCLSKFEDIEILRLLPKCKHAFH 141
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
+ CVDQWL S CPLC++++
Sbjct: 142 INCVDQWLEKHSSCPLCRRKV 162
>gi|390468395|ref|XP_002753235.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Callithrix jacchus]
Length = 594
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 498 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 557
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 558 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 587
>gi|351703763|gb|EHB06682.1| RING finger protein 115 [Heterocephalus glaber]
Length = 306
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 59/122 (48%), Gaps = 16/122 (13%)
Query: 215 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YKRV 272
+W+ + +S P +++ +LG N G A ++I+ LP+ ++V
Sbjct: 167 FSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQEQV 224
Query: 273 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
D+ LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C++
Sbjct: 225 DTGLE------------CPVCKDDYTVEEEVRQLPCNHFFHSSCIVPWLELHDTCPVCRK 272
Query: 333 EL 334
L
Sbjct: 273 SL 274
>gi|114657305|ref|XP_001172697.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Pan
troglodytes]
Length = 995
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 899 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 958
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 959 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 988
>gi|449464090|ref|XP_004149762.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
gi|449505086|ref|XP_004162372.1| PREDICTED: putative RING-H2 finger protein ATL21A-like [Cucumis
sativus]
Length = 393
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%), Gaps = 1/50 (2%)
Query: 283 PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
P + D C ICL++Y+ KE +R +P C H FH CVD+WL++ + CP+C+
Sbjct: 310 PKSNDTTCAICLSEYQSKETIRTIPDCGHFFHANCVDEWLKLNATCPVCR 359
>gi|15233725|ref|NP_192651.1| putative RING-H2 finger protein ATL36 [Arabidopsis thaliana]
gi|68565318|sp|Q9M0R5.1|ATL36_ARATH RecName: Full=Putative RING-H2 finger protein ATL36; Flags:
Precursor
gi|7267555|emb|CAB78036.1| putative protein [Arabidopsis thaliana]
gi|332657324|gb|AEE82724.1| putative RING-H2 finger protein ATL36 [Arabidopsis thaliana]
Length = 345
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 57/115 (49%), Gaps = 12/115 (10%)
Query: 226 FLLFLLLCCCVPLI-----SSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGN 280
F+ ++ CC+ I G ++ A +G + I P++ Y V L+ G
Sbjct: 60 FISLGMVSCCLHCIFYREEIGAAGQDVLHSRARRGLEKEVIESFPTFLYSEVK-GLKIGK 118
Query: 281 SAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
EC ICL++++++E +R +P CSH FH C+D WL S CP+C+ L
Sbjct: 119 GGV-----ECAICLSEFEDQETLRWMPPCSHTFHANCIDVWLSSWSTCPVCRANL 168
>gi|115459386|ref|NP_001053293.1| Os04g0511600 [Oryza sativa Japonica Group]
gi|38345315|emb|CAE03385.2| OSJNBa0004N05.9 [Oryza sativa Japonica Group]
gi|113564864|dbj|BAF15207.1| Os04g0511600 [Oryza sativa Japonica Group]
gi|116311076|emb|CAH68006.1| OSIGBa0157K09-H0214G12.17 [Oryza sativa Indica Group]
Length = 730
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
GAS+ QI+ LP + SN+E +P C +CL + +R+LPC HMFH
Sbjct: 663 GASESQINNLP---QSVIQSNIE---------EP-CAVCLDNPSIGDTIRRLPCFHMFHK 709
Query: 315 KCVDQWLRILSCCPLCK 331
+C+D+WLR CP+CK
Sbjct: 710 ECIDEWLRRKKLCPVCK 726
>gi|426233214|ref|XP_004010612.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Ovis
aries]
Length = 986
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|356513598|ref|XP_003525499.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Glycine max]
Length = 382
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 202 GLYLTPAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFYVGNEVRG 250
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH++C+D+WLR+ CP C+
Sbjct: 251 LPCAHNFHVECIDEWLRLNVKCPRCR 276
>gi|350583443|ref|XP_003481520.1| PREDICTED: E3 ubiquitin-protein ligase RNF115-like [Sus scrofa]
Length = 293
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPS--WRYK 270
S +W+ + +S P +++ +LG N G A ++I+ LP+ +
Sbjct: 152 SPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTITQE 209
Query: 271 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
+VD LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C
Sbjct: 210 QVDKGLE------------CPVCKEDYTVEEEVRQLPCNHFFHSSCIVPWLELHDACPVC 257
Query: 331 KQEL 334
++ L
Sbjct: 258 RKSL 261
>gi|224087937|ref|XP_002308266.1| predicted protein [Populus trichocarpa]
gi|222854242|gb|EEE91789.1| predicted protein [Populus trichocarpa]
Length = 188
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%), Gaps = 10/78 (12%)
Query: 262 SRLPS-WRYKR--VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCV 317
S LPS ++YK+ +D + + G+ EC +CL+ ++E EEVR+LP C H FH C+
Sbjct: 83 SNLPSSFKYKKGKIDGDQDQGSGY------ECAVCLSAFEEGEEVRQLPRCKHSFHAPCI 136
Query: 318 DQWLRILSCCPLCKQELE 335
D WL S CPLC+ ++
Sbjct: 137 DMWLYSHSDCPLCRSSVD 154
>gi|218195198|gb|EEC77625.1| hypothetical protein OsI_16613 [Oryza sativa Indica Group]
gi|222629194|gb|EEE61326.1| hypothetical protein OsJ_15437 [Oryza sativa Japonica Group]
Length = 713
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 13/77 (16%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
GAS+ QI+ LP + SN+E +P C +CL + +R+LPC HMFH
Sbjct: 646 GASESQINNLP---QSVIQSNIE---------EP-CAVCLDNPSIGDTIRRLPCFHMFHK 692
Query: 315 KCVDQWLRILSCCPLCK 331
+C+D+WLR CP+CK
Sbjct: 693 ECIDEWLRRKKLCPVCK 709
>gi|397515415|ref|XP_003827947.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Pan
paniscus]
Length = 984
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|242074038|ref|XP_002446955.1| hypothetical protein SORBIDRAFT_06g025850 [Sorghum bicolor]
gi|241938138|gb|EES11283.1| hypothetical protein SORBIDRAFT_06g025850 [Sorghum bicolor]
Length = 247
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G KG + I+ LP+ YK G + + EC IC YK ++ + KLPC
Sbjct: 167 IGTESKGLPESVIALLPTSTYK-------IGIFSRKEKHEECVICCMSYKNRDRLTKLPC 219
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H CV +WL+I CP+C +E+
Sbjct: 220 GHQYHQACVAKWLQINKVCPVCNKEV 245
>gi|242014475|ref|XP_002427915.1| RING finger protein, putative [Pediculus humanus corporis]
gi|212512399|gb|EEB15177.1| RING finger protein, putative [Pediculus humanus corporis]
Length = 560
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 48/82 (58%), Gaps = 11/82 (13%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCI-CLAKYKEKEEVRKLPCS 309
A +G +I +LPS+++ N+E S D CC+ C+ ++ ++ +R LPCS
Sbjct: 471 AKPRGLFRAEIEQLPSYKF-----NVENHQS-----DQTCCVVCMCDFEPRQSLRVLPCS 520
Query: 310 HMFHLKCVDQWLRILSCCPLCK 331
H FH KCVD+WL+ CP+C+
Sbjct: 521 HEFHAKCVDKWLKGNRTCPICR 542
>gi|37595553|ref|NP_060080.6| E3 ubiquitin-protein ligase Arkadia isoform 2 [Homo sapiens]
gi|119597962|gb|EAW77556.1| ring finger protein 111, isoform CRA_c [Homo sapiens]
gi|119597963|gb|EAW77557.1| ring finger protein 111, isoform CRA_c [Homo sapiens]
Length = 986
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|431895957|gb|ELK05375.1| E3 ubiquitin-protein ligase Arkadia [Pteropus alecto]
Length = 1100
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 1047 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 1093
>gi|426379247|ref|XP_004056313.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Gorilla
gorilla gorilla]
Length = 986
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|332235794|ref|XP_003267089.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Nomascus
leucogenys]
Length = 986
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|224094300|ref|XP_002310131.1| predicted protein [Populus trichocarpa]
gi|222853034|gb|EEE90581.1| predicted protein [Populus trichocarpa]
Length = 130
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 8/94 (8%)
Query: 240 SSVLGYNMNMGAADKGASDDQI-SRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYK 298
+L MG G S+D I + L W+Y+ V +ED CCIC Y
Sbjct: 39 EQLLALEEQMGNVSTGLSEDAIVATLKHWKYQAV-------ADGSDSEDEPCCICQEAYA 91
Query: 299 EKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
+++++ KL C H FH C+ +WL + CP+CK+
Sbjct: 92 DEDDLGKLKCGHDFHFNCIKRWLVEKNNCPICKK 125
>gi|335279598|ref|XP_003353382.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sus scrofa]
Length = 984
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|31874557|emb|CAD98031.1| hypothetical protein [Homo sapiens]
Length = 986
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 52/90 (57%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + G + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGGEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|449441410|ref|XP_004138475.1| PREDICTED: E3 ubiquitin-protein ligase SDIR1-like [Cucumis sativus]
Length = 275
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/97 (31%), Positives = 45/97 (46%), Gaps = 22/97 (22%)
Query: 257 SDDQISRLPSWRYK----------------------RVDSNLEAGNSAPANEDPECCICL 294
S++QI+ LP +YK R DS G++ + ++ C +CL
Sbjct: 159 SEEQINALPVHKYKVSGPQSDSSVNQQASSSESIEKRQDSVNAVGSTKTSEDELTCSVCL 218
Query: 295 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
+ E +R LPC H FH C+D WLR CP+CK
Sbjct: 219 EQVNVGELIRSLPCLHQFHANCIDPWLRQQGTCPVCK 255
>gi|383155801|gb|AFG60106.1| Pinus taeda anonymous locus 0_14595_01 genomic sequence
gi|383155810|gb|AFG60115.1| Pinus taeda anonymous locus 0_14595_01 genomic sequence
Length = 138
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 40/65 (61%), Gaps = 5/65 (7%)
Query: 269 YKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSC 326
++ S E G+ A ED CC ICL+ Y+E E VR +P C HMFH C+DQWLR
Sbjct: 46 FRSSKSEREEGSEA---EDKSCCSICLSDYRESEVVRVMPDCGHMFHAVCIDQWLRRHVT 102
Query: 327 CPLCK 331
CPLC+
Sbjct: 103 CPLCR 107
>gi|5262756|emb|CAB45904.1| putative protein [Arabidopsis thaliana]
gi|7270048|emb|CAB79863.1| putative protein [Arabidopsis thaliana]
Length = 488
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
ED +C IC +Y +EV +L C H +H+KCV +WLRI S CP+CK E
Sbjct: 435 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAE 484
>gi|443722532|gb|ELU11354.1| hypothetical protein CAPTEDRAFT_180387 [Capitella teleta]
Length = 341
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 34/46 (73%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
C ICL+ +++ +EVR+LPC H+FH+ CVD WL CP+C+ ++E
Sbjct: 259 CTICLSDFEDSDEVRRLPCMHLFHIGCVDTWLSSNRRCPICRVDIE 304
>gi|301782361|ref|XP_002926594.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like isoform 1
[Ailuropoda melanoleuca]
Length = 985
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|255082784|ref|XP_002504378.1| ring-h2 finger protein [Micromonas sp. RCC299]
gi|226519646|gb|ACO65636.1| ring-h2 finger protein [Micromonas sp. RCC299]
Length = 341
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 48/89 (53%), Gaps = 8/89 (8%)
Query: 248 NMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP 307
+G KG + + I LP RY +AP E+ +C ICL++++E +E ++P
Sbjct: 246 QIGTQSKGLAPEVIDALPVRRYT-------CAGTAPGREEEKCMICLSEFEEGDEAARVP 298
Query: 308 -CSHMFHLKCVDQWLRILSCCPLCKQELE 335
C H +H C+ WL CCP+CK E++
Sbjct: 299 KCGHEYHRGCLTPWLGDNKCCPICKTEID 327
>gi|15225932|ref|NP_182139.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana]
gi|68565091|sp|O82353.1|ATL67_ARATH RecName: Full=RING-H2 finger protein ATL67
gi|3702333|gb|AAC62890.1| hypothetical protein [Arabidopsis thaliana]
gi|18491265|gb|AAL69457.1| At2g46160/T3F17.19 [Arabidopsis thaliana]
gi|330255556|gb|AEC10650.1| RING-H2 finger protein ATL67 [Arabidopsis thaliana]
Length = 214
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 49/90 (54%), Gaps = 4/90 (4%)
Query: 246 NMNMGAADKGASDDQ--ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEV 303
N ++ A D DQ I+ P + + + D++ + + D C ICL +YKE E +
Sbjct: 93 NEDLEAGDVVVGLDQAVINSYPKFHFSK-DTSAASSDGFGGGGDTTCSICLCEYKEAEML 151
Query: 304 RKLP-CSHMFHLKCVDQWLRILSCCPLCKQ 332
R +P C H FHL C+D WL++ CP+C+
Sbjct: 152 RMMPECKHYFHLCCLDAWLKLNGSCPVCRN 181
>gi|395822247|ref|XP_003784433.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Otolemur
garnettii]
Length = 984
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|145552228|ref|XP_001461790.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429626|emb|CAK94417.1| unnamed protein product [Paramecium tetraurelia]
Length = 225
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 52/111 (46%), Gaps = 2/111 (1%)
Query: 226 FLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPAN 285
FL F+LL C V ++ L + KG I RL + +
Sbjct: 114 FLEFILLYCLVFVLVIALPLLCCLSIYRKGKHLYSIRRLKKYLDSIPPHKYTGSDDTWMK 173
Query: 286 EDPECCICLAKYKEKEEVRKLPCS--HMFHLKCVDQWLRILSCCPLCKQEL 334
ED CCIC+ +Y + E + +LPCS H FH C+ W + + CP+C+Q+L
Sbjct: 174 EDKTCCICMQEYVQHENILQLPCSGQHQFHELCIRNWFNVSTSCPICRQQL 224
>gi|109081305|ref|XP_001098434.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 7 [Macaca
mulatta]
Length = 984
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|38173842|gb|AAH60862.1| Ring finger protein 111 [Homo sapiens]
Length = 985
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|74000295|ref|XP_535498.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Canis
lupus familiaris]
Length = 985
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|197100103|ref|NP_001124565.1| E3 ubiquitin-protein ligase Arkadia [Pongo abelii]
gi|75070423|sp|Q5R476.1|RN111_PONAB RecName: Full=E3 ubiquitin-protein ligase Arkadia; AltName:
Full=RING finger protein 111
gi|55733525|emb|CAH93440.1| hypothetical protein [Pongo abelii]
Length = 986
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|225446541|ref|XP_002279296.1| PREDICTED: E3 ubiquitin-protein ligase ATL41-like [Vitis vinifera]
Length = 247
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 8/82 (9%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 313
G I LP +++ D+ E G + +C +CL+ +E E R LP C H FH
Sbjct: 85 GLDQSVIDSLPMFKFSENDTQEEGGTT-------DCAVCLSVLEEGEIARLLPNCKHTFH 137
Query: 314 LKCVDQWLRILSCCPLCKQELE 335
+C+D+WL S CP+C+ E E
Sbjct: 138 AECIDKWLGTHSTCPICRTEAE 159
>gi|168053219|ref|XP_001779035.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669597|gb|EDQ56181.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 81
Score = 62.4 bits (150), Expect = 3e-07, Method: Composition-based stats.
Identities = 26/51 (50%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 286 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
ED EC +CL K++E E +R LP CSH+FH +C+D W S CPLC+ L+
Sbjct: 30 EDFECAVCLEKFQEDESLRLLPKCSHVFHTECIDVWFLSHSTCPLCRMSLK 80
>gi|147821210|emb|CAN66450.1| hypothetical protein VITISV_043084 [Vitis vinifera]
Length = 366
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
DP C +C +Y+ EEVR++PC+H++H C+ WLRI + CP+C+ EL+
Sbjct: 200 DPCCPVCKEEYQAGEEVREMPCNHLYHSDCIVPWLRIHNSCPVCRYELQ 248
>gi|410913829|ref|XP_003970391.1| PREDICTED: RING finger protein 38-like [Takifugu rubripes]
Length = 578
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 16/87 (18%)
Query: 249 MGAAD-KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPE---CCICLAKYKEKEEVR 304
+G A +G + I +LPS+R+ P N E C +C++ ++ ++ +R
Sbjct: 493 LGEAKLRGLTKGDIEQLPSYRFN------------PNNHQSEQTLCVVCMSDFESRQLLR 540
Query: 305 KLPCSHMFHLKCVDQWLRILSCCPLCK 331
LPCSH FH KCVD+WLR CP+C+
Sbjct: 541 VLPCSHEFHGKCVDKWLRANRTCPICR 567
>gi|116789665|gb|ABK25333.1| unknown [Picea sitchensis]
Length = 413
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 45/81 (55%), Gaps = 10/81 (12%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 313
G + I +P ++YKR D ++ +C +CL+++ E + VR LP C+H FH
Sbjct: 122 GLEESTIRSIPVYKYKRGDGLVDCT---------DCSVCLSEFHEDDSVRLLPKCNHAFH 172
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
+ C+D WL S CPLC+ +
Sbjct: 173 VPCIDTWLNSHSNCPLCRANI 193
>gi|395455083|ref|NP_001257458.1| E3 ubiquitin-protein ligase Arkadia isoform 3 [Homo sapiens]
gi|119597968|gb|EAW77562.1| ring finger protein 111, isoform CRA_g [Homo sapiens]
Length = 985
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|148231430|ref|NP_001087597.1| ring finger protein 167 precursor [Xenopus laevis]
gi|51513472|gb|AAH80409.1| MGC86297 protein [Xenopus laevis]
Length = 341
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 67/135 (49%), Gaps = 18/135 (13%)
Query: 206 NLHVLCISLLAWNALSYSFPFLLFL---LLCCCVPLISSVLGYNMNMGAADKGASDDQIS 262
N H+ + ++ Y PF++ + ++ C+ ++ + Y M S +Q++
Sbjct: 159 NSHIYLMPDYYFSLGYYLIPFIVVVSAFIIIMCIVMVVRCVQYRKRM--RRNRLSKEQLN 216
Query: 263 RLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWL- 321
++P ++K+ D + C ICL +Y+E +++R LPCSH +H CVD WL
Sbjct: 217 KIPIHKFKKGD------------DYDVCAICLEEYEEGDKLRVLPCSHAYHSSCVDPWLT 264
Query: 322 RILSCCPLCKQELER 336
+ CP+CK + R
Sbjct: 265 KTKKSCPVCKNRVFR 279
>gi|395502785|ref|XP_003755756.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sarcophilus
harrisii]
Length = 981
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 944
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 974
>gi|297791661|ref|XP_002863715.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
gi|297309550|gb|EFH39974.1| zinc finger family protein [Arabidopsis lyrata subsp. lyrata]
Length = 682
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 45/78 (57%), Gaps = 9/78 (11%)
Query: 255 GASDDQIS-RLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFH 313
G +++ IS RL +YK + +P + +P CCIC +Y E E++ L C H FH
Sbjct: 600 GVNEETISNRLKQRKYK-------SNTKSPQDTEP-CCICQEEYNEGEDMGTLECGHEFH 651
Query: 314 LKCVDQWLRILSCCPLCK 331
+C+ +WL+ + CP+CK
Sbjct: 652 SQCIKEWLKQKNLCPICK 669
>gi|432094725|gb|ELK26205.1| E3 ubiquitin-protein ligase RLIM [Myotis davidii]
Length = 795
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 33/45 (73%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
C IC+ +Y E ++R LPCSH +H+ C+D+WL S CP+C++E+
Sbjct: 747 CIICITEYTEGNKLRILPCSHEYHVHCIDRWLSDNSTCPICRREV 791
>gi|387273413|gb|AFJ70201.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
Length = 984
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|255581543|ref|XP_002531577.1| protein binding protein, putative [Ricinus communis]
gi|223528807|gb|EEF30813.1| protein binding protein, putative [Ricinus communis]
Length = 276
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
G+S Q S S K+ D+ G+ + ++ C +CL + E +R LPC H FH
Sbjct: 179 GSSMQQASSSVSAEPKKQDTANAVGSMKASEDELTCSVCLEQVNVGELIRTLPCLHQFHA 238
Query: 315 KCVDQWLRILSCCPLCK 331
C+D WLR CP+CK
Sbjct: 239 NCIDPWLRQQGTCPVCK 255
>gi|224132906|ref|XP_002321438.1| predicted protein [Populus trichocarpa]
gi|222868434|gb|EEF05565.1| predicted protein [Populus trichocarpa]
Length = 384
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 36/55 (65%), Gaps = 1/55 (1%)
Query: 283 PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELER 336
P +D C ICL +YK KE ++ +P C H FH C+D+WLR+ + CP+C+ ER
Sbjct: 324 PKPDDNTCSICLCEYKPKETLKTIPECKHCFHSDCIDEWLRLNASCPICRNSPER 378
>gi|380813986|gb|AFE78867.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
gi|383419407|gb|AFH32917.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
Length = 984
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|291402920|ref|XP_002718253.1| PREDICTED: ring finger protein 111 isoform 1 [Oryctolagus
cuniculus]
Length = 984
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 888 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 947
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 977
>gi|224124800|ref|XP_002319425.1| predicted protein [Populus trichocarpa]
gi|222857801|gb|EEE95348.1| predicted protein [Populus trichocarpa]
Length = 128
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/47 (57%), Positives = 36/47 (76%), Gaps = 1/47 (2%)
Query: 289 ECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+C ICL ++ E E+VR LP CSH FH+KC+D+WL + S CPLC+Q L
Sbjct: 81 DCPICLGEFSEGEKVRVLPQCSHGFHVKCIDRWLLLHSSCPLCRQAL 127
>gi|449433165|ref|XP_004134368.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
gi|449487632|ref|XP_004157723.1| PREDICTED: RING-H2 finger protein ATL51-like [Cucumis sativus]
Length = 382
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQ 319
I + +YKR D +E +C +CL++++E E +R LP CSH FHL C+D
Sbjct: 124 IKSITVCKYKRGDGLVEG---------TDCSVCLSEFQENESLRLLPKCSHAFHLPCIDT 174
Query: 320 WLRILSCCPLCKQEL 334
WL+ S CPLC+ +
Sbjct: 175 WLKSHSTCPLCRSNI 189
>gi|449449014|ref|XP_004142260.1| PREDICTED: RING-H2 finger protein ATL16-like [Cucumis sativus]
Length = 307
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 10/86 (11%)
Query: 251 AADKGASDDQISRLPSWRYKR-VDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 308
A +G I +P YK+ ++ G EC +CL +++ +E++RK+P C
Sbjct: 78 AEPRGLDPSTIQSIPLINYKKPINETTTTGG--------ECAVCLTEFQTEEQLRKIPIC 129
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
SH+FH+ C+D WL+ S CPLC+ +
Sbjct: 130 SHLFHIDCIDIWLQNNSNCPLCRTSI 155
>gi|356531427|ref|XP_003534279.1| PREDICTED: E3 ubiquitin-protein ligase Os04g0590900-like [Glycine
max]
Length = 370
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 10/85 (11%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A+ G + I + + +YK+ D +E +C +CL+++++ E VR LP CS
Sbjct: 115 ASTIGLDEALIKSITACKYKKGDGLVEV---------TDCSVCLSEFRDDESVRLLPKCS 165
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
H FHL C+D WL+ S CPLC+ +
Sbjct: 166 HAFHLPCIDTWLKSHSSCPLCRASI 190
>gi|218191753|gb|EEC74180.1| hypothetical protein OsI_09301 [Oryza sativa Indica Group]
Length = 520
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 10/76 (13%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
++ LP YK+ +A ++D E C ICL +Y++ +++R LPC H FHL CVD+
Sbjct: 448 VNSLPCKSYKK--------QTAQCSDDMEQCHICLTEYEDGDQIRSLPCKHEFHLLCVDK 499
Query: 320 WLR-ILSCCPLCKQEL 334
WL+ + CPLC+ ++
Sbjct: 500 WLKEVHRVCPLCRGDV 515
>gi|114657299|ref|XP_510446.2| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 8 [Pan
troglodytes]
gi|410221200|gb|JAA07819.1| ring finger protein 111 [Pan troglodytes]
gi|410252214|gb|JAA14074.1| ring finger protein 111 [Pan troglodytes]
gi|410306404|gb|JAA31802.1| ring finger protein 111 [Pan troglodytes]
Length = 986
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 890 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 949
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 979
>gi|388513249|gb|AFK44686.1| unknown [Lotus japonicus]
Length = 302
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 48/85 (56%), Gaps = 8/85 (9%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
++ G + I + ++Y + GN+ E +C +CL++++E E +R LP C+
Sbjct: 119 SSSSGLDESLIKSITVFKYSK-------GNNGLVVEGSDCSVCLSEFQENESLRLLPKCN 171
Query: 310 HMFHLKCVDQWLRILSCCPLCKQEL 334
H FHL C+D WL+ S CPLC+ +
Sbjct: 172 HAFHLPCIDPWLKSHSSCPLCRSNI 196
>gi|110741108|dbj|BAE98648.1| hypothetical protein [Arabidopsis thaliana]
Length = 390
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/50 (50%), Positives = 33/50 (66%)
Query: 286 EDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
ED +C IC +Y +EV +L C H +H+KCV +WLRI S CP+CK E
Sbjct: 337 EDAKCSICQEEYTIGDEVGRLHCEHTYHVKCVQEWLRIKSWCPICKATAE 386
>gi|224107873|ref|XP_002314635.1| predicted protein [Populus trichocarpa]
gi|222863675|gb|EEF00806.1| predicted protein [Populus trichocarpa]
Length = 340
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 50/84 (59%), Gaps = 8/84 (9%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDP--ECCICLAKYKEKEEVRKLP-CSH 310
+G + I +P +++K+ E N E EC +CL +++E E++R++P CSH
Sbjct: 85 RGLDESVIRSIPVFKFKK-----EGNNVRNVGERSFCECAVCLNEFQEAEKLRRIPNCSH 139
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
+FH+ C+D WL+ + CPLC+ +
Sbjct: 140 VFHIDCIDVWLQSNANCPLCRTSI 163
>gi|194206605|ref|XP_001500178.2| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 2 [Equus
caballus]
Length = 985
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 889 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 948
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|432102802|gb|ELK30276.1| RING finger protein 44 [Myotis davidii]
Length = 457
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LP++R+ DS+ +E C +C + ++ ++ +R LPCSH
Sbjct: 375 AKPRGLTKADIEQLPAYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCSH 425
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 426 EFHTKCVDKWLKANRTCPICRAD 448
>gi|343962063|dbj|BAK62619.1| RING finger protein 13 [Pan troglodytes]
Length = 180
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 46/77 (59%), Gaps = 13/77 (16%)
Query: 259 DQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVD 318
DQ+ +LP ++K+ D E C ICL +Y++ +++R LPCSH +H KCVD
Sbjct: 20 DQLKKLPVHKFKKGD------------EYDVCAICLDEYEDGDKLRILPCSHAYHCKCVD 67
Query: 319 QWL-RILSCCPLCKQEL 334
WL + CP+CKQ++
Sbjct: 68 PWLTKTKKTCPVCKQKV 84
>gi|194692670|gb|ACF80419.1| unknown [Zea mays]
gi|414866069|tpg|DAA44626.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 207
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
G S +S S ++ D G S P+ ++ C +CL + + +R LPC H FH+
Sbjct: 110 GPSQLSVSSTGSGNEEKQDGLKADGTSKPSEDELTCSVCLEQVTVGDLLRSLPCLHQFHV 169
Query: 315 KCVDQWLRILSCCPLCKQEL 334
C+D WLR CP+CK ++
Sbjct: 170 NCIDPWLRQQGTCPICKHQV 189
>gi|74205977|dbj|BAE23252.1| unnamed protein product [Mus musculus]
Length = 876
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 780 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 839
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 840 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 869
>gi|115449247|ref|NP_001048403.1| Os02g0798600 [Oryza sativa Japonica Group]
gi|51091322|dbj|BAD36057.1| zinc finger protein-like [Oryza sativa Japonica Group]
gi|113537934|dbj|BAF10317.1| Os02g0798600 [Oryza sativa Japonica Group]
gi|222623853|gb|EEE57985.1| hypothetical protein OsJ_08736 [Oryza sativa Japonica Group]
Length = 389
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 10/76 (13%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPE-CCICLAKYKEKEEVRKLPCSHMFHLKCVDQ 319
++ LP YK+ +A ++D E C ICL +Y++ +++R LPC H FHL CVD+
Sbjct: 317 VNSLPCKSYKK--------QTAQCSDDMEQCHICLTEYEDGDQIRSLPCKHEFHLLCVDK 368
Query: 320 WLR-ILSCCPLCKQEL 334
WL+ + CPLC+ ++
Sbjct: 369 WLKEVHRVCPLCRGDV 384
>gi|402579379|gb|EJW73331.1| hypothetical protein WUBG_15762 [Wuchereria bancrofti]
Length = 204
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 33/45 (73%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
C IC +++++ VR LPC+H FHLKC+D+WLR CP+C+Q +
Sbjct: 85 CVICQCDFEKRDMVRMLPCAHHFHLKCIDKWLRGNRTCPICRQNV 129
>gi|47077085|dbj|BAD18471.1| unnamed protein product [Homo sapiens]
Length = 994
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLVTNKKCPICRVDIE 987
>gi|449457941|ref|XP_004146706.1| PREDICTED: uncharacterized protein LOC101215855 [Cucumis sativus]
gi|449505397|ref|XP_004162456.1| PREDICTED: uncharacterized protein LOC101226984 [Cucumis sativus]
Length = 541
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 38/52 (73%), Gaps = 1/52 (1%)
Query: 284 ANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 334
+E +C ICLA+Y+E +++R LPC H +H+ CVD+WL+ I CPLC+ ++
Sbjct: 471 GDEIEQCYICLAEYEEGDKIRVLPCRHEYHMLCVDKWLKEIHGVCPLCRGDV 522
>gi|376335797|gb|AFB32558.1| hypothetical protein 0_15036_01, partial [Pinus mugo]
Length = 134
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 60/123 (48%), Gaps = 22/123 (17%)
Query: 220 LSYSFPFLLFLLLCC--CVPLISSVLGYN---------MNMGAADKGASDDQISRLPSWR 268
+S + +L +LLC C+ ++S++ ++ M A+ G +D I LPS
Sbjct: 22 MSENMILILLVLLCTVICLMGLASIIPWDKIWRSCHDHMATRRANTGMNDKSIEALPSII 81
Query: 269 YKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCC 327
Y + L +C ICLA + E E VR LP C+H FH CVD+WLR S C
Sbjct: 82 YGKSMQQLAT----------DCAICLADFVEGEAVRVLPSCNHGFHTGCVDKWLRSHSSC 131
Query: 328 PLC 330
P C
Sbjct: 132 PTC 134
>gi|357512347|ref|XP_003626462.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
gi|355501477|gb|AES82680.1| RING-H2 zinc finger protein-like protein [Medicago truncatula]
Length = 249
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/81 (38%), Positives = 43/81 (53%), Gaps = 7/81 (8%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
A G + I +PS+ Y S E + EC +CL +Y++ + +R LP CSH
Sbjct: 64 APHGLDESVIYAIPSFIYTTTKSEQEEESRG------ECVVCLEEYEDNDHIRILPFCSH 117
Query: 311 MFHLKCVDQWLRILSCCPLCK 331
FHL C+D WLR CPLC+
Sbjct: 118 TFHLNCIDVWLRSNPSCPLCR 138
>gi|298204570|emb|CBI23845.3| unnamed protein product [Vitis vinifera]
Length = 451
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 36/49 (73%)
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
DP C +C +Y+ EEVR++PC+H++H C+ WLRI + CP+C+ EL+
Sbjct: 200 DPCCPVCKEEYRAGEEVREMPCNHLYHSDCIVPWLRIHNSCPVCRYELQ 248
>gi|301096647|ref|XP_002897420.1| RING Finger Ubiquitin ligase, putative [Phytophthora infestans
T30-4]
gi|262107111|gb|EEY65163.1| RING Finger Ubiquitin ligase, putative [Phytophthora infestans
T30-4]
Length = 346
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 44/75 (58%), Gaps = 3/75 (4%)
Query: 260 QISRLPSWRYKRVDSNLEAGNSAPANE--DPECCICLAKYKEKEEVRKLPCSHMFHLKCV 317
QI LP++ Y+ V ++E + E + C +C +++ +EEVR LPC H +H +C+
Sbjct: 268 QIIALPTFNYQ-VREHVEKNQTEEGGEVNNTVCAVCCDEFEAEEEVRALPCLHFYHRECI 326
Query: 318 DQWLRILSCCPLCKQ 332
DQWL CP+CK
Sbjct: 327 DQWLMCHRQCPICKH 341
>gi|281343329|gb|EFB18913.1| hypothetical protein PANDA_019185 [Ailuropoda melanoleuca]
Length = 344
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 257 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
+ DQ+ ++P+ Y++ D + C ICL +Y++ +++R LPC+H +H +C
Sbjct: 209 TKDQLKQIPTHDYQKGD------------QYDVCAICLDEYEDGDKLRVLPCAHAYHSRC 256
Query: 317 VDQWL-RILSCCPLCKQELER 336
VD WL + CP+CKQ + R
Sbjct: 257 VDPWLTQTRKTCPICKQPVHR 277
>gi|426216417|ref|XP_004002459.1| PREDICTED: E3 ubiquitin-protein ligase RNF115 [Ovis aries]
Length = 293
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YK 270
S +W+ + +S P +++ +LG N G A ++I+ LP+ +
Sbjct: 152 SPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQE 209
Query: 271 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
+VD LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C
Sbjct: 210 QVDKGLE------------CPVCKEDYTVEEEVRQLPCNHYFHSSCIVPWLELHDACPVC 257
Query: 331 KQEL 334
++ L
Sbjct: 258 RKSL 261
>gi|47222931|emb|CAF99087.1| unnamed protein product [Tetraodon nigroviridis]
Length = 687
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 32/43 (74%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C+ +Y E ++RKLPCSH +H+ C+D+WL S CP+C++
Sbjct: 633 CSVCITEYAEGNKLRKLPCSHEYHVHCIDRWLSENSTCPICRR 675
>gi|363739122|ref|XP_003642121.1| PREDICTED: RING finger protein 44-like [Gallus gallus]
Length = 498
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 416 AKPRGLTKADIEHLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 466
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 467 EFHAKCVDKWLKANRTCPICRAD 489
>gi|297819418|ref|XP_002877592.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297323430|gb|EFH53851.1| hypoxia-responsive family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 366
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
D G I LP + Y V +L+ E +C +CL ++ + +++R LP CSH
Sbjct: 175 DSGLDQTSIDALPVFLYGNVTMSLK--------ESFDCAVCLNEFSDTDKLRLLPVCSHA 226
Query: 312 FHLKCVDQWLRILSCCPLCKQEL 334
FHL C+D WL S CPLC++ L
Sbjct: 227 FHLHCIDTWLLSNSTCPLCRRSL 249
>gi|242036905|ref|XP_002465847.1| hypothetical protein SORBIDRAFT_01g046930 [Sorghum bicolor]
gi|241919701|gb|EER92845.1| hypothetical protein SORBIDRAFT_01g046930 [Sorghum bicolor]
Length = 317
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 50/97 (51%), Gaps = 8/97 (8%)
Query: 236 VPLISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLA 295
V +S+V + G D ++ LP RY R A +SA A+E C +CL
Sbjct: 83 VERVSAVFFTDHEAAELPGGLDPDVVAALPVVRYHR----RRAKDSASASE---CAVCLG 135
Query: 296 KYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
++ E +++LP CSH FH+ C+D WL CPLC+
Sbjct: 136 EFAPGERLKQLPTCSHAFHIDCIDTWLHHNVSCPLCR 172
>gi|13752369|gb|AAK38636.1|AF329846_1 ring finger protein, partial [Gallus gallus]
Length = 879
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 826 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 872
>gi|259490266|ref|NP_001159177.1| uncharacterized LOC100304262 precursor [Zea mays]
gi|223942485|gb|ACN25326.1| unknown [Zea mays]
gi|413956777|gb|AFW89426.1| putative RING zinc finger domain superfamily protein [Zea mays]
Length = 380
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 308
G A G + + P+ Y V + + A S + EC +CLA +++++E+R LP C
Sbjct: 112 GGARAGLDKEVVESFPTAVYGDVKARV-AARSGSGSGPLECAVCLAAFEDQDELRVLPAC 170
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H+FH C+D WL CPLC+ +L
Sbjct: 171 CHVFHPDCIDPWLAGAVTCPLCRADL 196
>gi|260782279|ref|XP_002586217.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
gi|229271313|gb|EEN42228.1| hypothetical protein BRAFLDRAFT_109575 [Branchiostoma floridae]
Length = 619
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 49/100 (49%), Gaps = 10/100 (10%)
Query: 237 PLISSVLGYNMNMGAAD--KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICL 294
PL LG ++ D +G + +QI LP+ + A NS C +C+
Sbjct: 524 PLTLVFLGIVISADGEDTPRGLTKEQIDTLPTRTFSEPSREENATNS--------CNVCI 575
Query: 295 AKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
Y E +R LPC+H FH CVD+WL I + CP+C+ +
Sbjct: 576 TDYIEGSVLRCLPCTHEFHAVCVDRWLGINASCPVCRHTV 615
>gi|354465240|ref|XP_003495088.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1
[Cricetulus griseus]
gi|344243798|gb|EGV99901.1| E3 ubiquitin-protein ligase Arkadia [Cricetulus griseus]
Length = 990
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 937 KCTICLSVLEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 983
>gi|355692754|gb|EHH27357.1| hypothetical protein EGK_17534 [Macaca mulatta]
Length = 1001
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 994
>gi|354465242|ref|XP_003495089.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2
[Cricetulus griseus]
Length = 982
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 886 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSVLEEGEDVRR 945
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 946 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 975
>gi|326490868|dbj|BAJ90101.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 298
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/62 (43%), Positives = 39/62 (62%), Gaps = 4/62 (6%)
Query: 274 SNLEAGNSA---PANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPL 329
+ L AG+ + PA E+ +C +CL +Y+ K+ VR LP C H FH C+D WLR CP+
Sbjct: 86 AKLGAGDDSRRPPAQEESQCTVCLEEYEAKDVVRVLPYCGHAFHAACIDTWLRHHPTCPI 145
Query: 330 CK 331
C+
Sbjct: 146 CR 147
>gi|47125046|gb|AAH69835.1| Rnf111 protein [Mus musculus]
Length = 981
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 944
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 974
>gi|26331328|dbj|BAC29394.1| unnamed protein product [Mus musculus]
Length = 981
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 944
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 974
>gi|26339148|dbj|BAC33245.1| unnamed protein product [Mus musculus]
Length = 981
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 885 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 944
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 945 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 974
>gi|358414167|ref|XP_003582765.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like isoform 2 [Bos
taurus]
Length = 636
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 297
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 532 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 591
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 592 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 629
>gi|224067536|ref|XP_002197442.1| PREDICTED: RING finger protein 44 [Taeniopygia guttata]
Length = 442
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 47/83 (56%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I LPS+R+ N E+ S E C +C + ++ ++ +R LPC+H
Sbjct: 360 AKPRGLTKADIEHLPSYRF-----NPESHQS----EQTLCVVCFSDFEARQLLRVLPCNH 410
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 411 EFHAKCVDKWLKANRTCPICRAD 433
>gi|315075292|ref|NP_001186680.1| E3 ubiquitin-protein ligase Arkadia [Gallus gallus]
Length = 985
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 932 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|49388302|dbj|BAD25417.1| hypothetical protein [Oryza sativa Japonica Group]
gi|49388472|dbj|BAD25599.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 258
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G ++ P+ ++ S A A A E+ +C +CL +Y+ K+ VR LP C H F
Sbjct: 74 RGLEPAVVTSFPTAKFGDGGSRPRA---AAALEESQCPVCLEEYEAKDVVRVLPSCGHAF 130
Query: 313 HLKCVDQWLRILSCCPLCKQEL 334
H+ C+D WLR S CP+C+ L
Sbjct: 131 HVACIDAWLRQHSTCPVCRASL 152
>gi|355778079|gb|EHH63115.1| hypothetical protein EGM_16017 [Macaca fascicularis]
Length = 1002
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 949 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 995
>gi|348676453|gb|EGZ16271.1| hypothetical protein PHYSODRAFT_560772 [Phytophthora sojae]
Length = 354
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 44/76 (57%), Gaps = 4/76 (5%)
Query: 260 QISRLPSWRYK---RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
QI LP+++Y+ R D + + N + C +C +++ +EEVR LPC H +H +C
Sbjct: 275 QIIALPTFKYQFRERHDDENQTEEDSEVN-NTVCAVCCDEFEAEEEVRALPCLHFYHREC 333
Query: 317 VDQWLRILSCCPLCKQ 332
+DQWL CP+CK
Sbjct: 334 IDQWLMYHRQCPICKH 349
>gi|291398109|ref|XP_002715695.1| PREDICTED: Rabring 7 [Oryctolagus cuniculus]
Length = 305
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/122 (29%), Positives = 58/122 (47%), Gaps = 16/122 (13%)
Query: 215 LAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLP--SWRYKRV 272
+W+ + +S P +++ +LG N G A ++I+ LP S ++V
Sbjct: 166 FSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVSVTQEQV 223
Query: 273 DSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
D LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C++
Sbjct: 224 DMGLE------------CPVCKEDYTVREEVRQLPCNHFFHSSCIVPWLELHDTCPVCRK 271
Query: 333 EL 334
L
Sbjct: 272 SL 273
>gi|335279600|ref|XP_001928853.3| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 3 [Sus
scrofa]
Length = 992
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 939 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|395850185|ref|XP_003797677.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 1 [Otolemur
garnettii]
gi|395850187|ref|XP_003797678.1| PREDICTED: E3 ubiquitin-protein ligase RNF6 isoform 2 [Otolemur
garnettii]
Length = 681
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 230 LLLCCCVPLISSVLGYNMNMGAAD---KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 286
L+ +P++ + +N G D +G + +QI L + Y+ + E G
Sbjct: 573 LVETGTLPILRLAHFFLLNEGDDDDRIRGLTKEQIDNLSTRNYEHNSIDSELGKI----- 627
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C++ Y ++R+LPC+H FH+ C+D+WL CP+C+Q
Sbjct: 628 ---CSVCISDYVTGNKLRQLPCTHEFHIHCIDRWLSENCTCPVCRQ 670
>gi|348514454|ref|XP_003444755.1| PREDICTED: hypothetical protein LOC100696086 [Oreochromis
niloticus]
Length = 1005
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 38/126 (30%), Positives = 59/126 (46%), Gaps = 30/126 (23%)
Query: 224 FPFLLFLLLCCCVPLIS--------------SVLGYNMNMGAAD-KGASDDQISRLPSWR 268
P+ L +L P IS ++L +G A +G + I +LPS+R
Sbjct: 881 LPYFLSMLPVQPGPAISLELDVDDGEVENYEALLNLAERLGEAKLRGLTKGDIEQLPSYR 940
Query: 269 YKRVDSNLEAGNSAPANEDPE---CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILS 325
+ P N E C +C++ ++ ++ +R LPCSH FH KCVD+WLR
Sbjct: 941 FN------------PNNHQSEQTLCVVCMSDFESRQLLRVLPCSHEFHGKCVDKWLRANR 988
Query: 326 CCPLCK 331
CP+C+
Sbjct: 989 TCPICR 994
>gi|14714485|gb|AAH10369.1| RNF111 protein [Homo sapiens]
gi|119597960|gb|EAW77554.1| ring finger protein 111, isoform CRA_a [Homo sapiens]
Length = 137
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 51/90 (56%), Gaps = 3/90 (3%)
Query: 249 MGAADKGASDDQISRLP---SWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+G ++GAS I R ++ +++ + + + +C ICL+ +E E+VR+
Sbjct: 41 LGNVNRGASQGTIERCTYPHKYKKRKLHCKQDGEEGTEEDTEEKCTICLSILEEGEDVRR 100
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 101 LPCMHLFHQVCVDQWLITNKKCPICRVDIE 130
>gi|410961153|ref|XP_003987149.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Felis
catus]
Length = 925
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 297
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 821 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 880
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 881 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 918
>gi|403349495|gb|EJY74187.1| hypothetical protein OXYTRI_04558 [Oxytricha trifallax]
Length = 347
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 65/314 (20%), Positives = 133/314 (42%), Gaps = 34/314 (10%)
Query: 44 PSFLIRTAMRISRARWFNFLRRVFHYQNGSRSDLGSNPF----NSSTWMTLELLAL---- 95
P +++ I R+ F +R QN + GS PF N + E +
Sbjct: 45 PVLEQQSSTVIQRSGTFRDIRAQMAAQNQAGDGHGSGPFASALNRREYTEAEYKNVRNKS 104
Query: 96 ---LVQ---ISIITFTLSISKKESPIWPMRIWIVGYDIGCLLSL-LLLYGRYRQLYASQV 148
++Q + + F +++ K ++ +++ Y+ ++ L+++ LYA +
Sbjct: 105 IRNIIQELIVYAVCFGIALDKGDAT----KLYTEKYNCDTPIARWLIVFAYISLLYALKE 160
Query: 149 DGFSLPDVEQQRSSEDSRFSHLMNKCRTSLELFFAIWFVMGNVWVFD-SRFGSFQRAPNL 207
+ Q+++++ + + C L F W + GN + + + G +
Sbjct: 161 LIIVVLVCRQKQTAKKPKDCIELMTC-LCLLTFHVAWLIYGNTFHYSRNSMGCKDTFDDF 219
Query: 208 HVLCISLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSW 267
+ + ++ A++Y + L CC+ S VL + + G A++ + R+P
Sbjct: 220 KAMWVIMMI--AIAYGYLVFLIYGFACCIG--SCVLCFVIAAGRQQSRANNPMVDRIP-- 273
Query: 268 RYKRVDSNLEAGNSAPANED----PECCICLAKYKEKEEVRKLPCS--HMFHLKCVDQWL 321
Y +NL +E +C ICL Y + +E+ +L C H FH +C+ +WL
Sbjct: 274 -YLAAVNNLNRKKFENVDEQNRNMEQCAICLGDYVDTDEIAELKCDQRHYFHSECLKEWL 332
Query: 322 RILSCCPLCKQELE 335
+ CPLCK+E++
Sbjct: 333 KRKLECPLCKKEIK 346
>gi|348575005|ref|XP_003473280.1| PREDICTED: RING finger protein 44-like [Cavia porcellus]
Length = 432
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-ADSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHAKCVDKWLKANRTCPICRAD 423
>gi|115384252|ref|XP_001208673.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196365|gb|EAU38065.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 469
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/98 (36%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 238 LISSVLGYNMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKY 297
+IS ++G N+N G A AS I LP K+VD + GN A EC IC+
Sbjct: 377 VISELVGQNVN-GTAPPPASRSAIQSLPK---KKVDQEM-LGNDGRA----ECSICMDPV 427
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+ EV LPC H FH +C++ WL + CP C++ ++
Sbjct: 428 ELGTEVTVLPCKHWFHFQCIEMWLNQHNTCPHCRRGID 465
>gi|402873505|ref|XP_003900614.1| PREDICTED: RING finger protein 44 isoform 1 [Papio anubis]
Length = 432
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFETRQLLRVLPCNH 400
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|335279604|ref|XP_003353384.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Sus scrofa]
Length = 1001
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 994
>gi|326926532|ref|XP_003209453.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like [Meleagris
gallopavo]
Length = 985
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 932 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 978
>gi|242041429|ref|XP_002468109.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
gi|241921963|gb|EER95107.1| hypothetical protein SORBIDRAFT_01g039740 [Sorghum bicolor]
Length = 280
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 40/80 (50%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
G S +S S K+ D G S ++ C +CL + + +R LPC H FH+
Sbjct: 183 GPSQLSVSSTGSGNEKKQDGLKSDGTSKTPEDELTCSVCLEQVAVGDLLRSLPCLHQFHV 242
Query: 315 KCVDQWLRILSCCPLCKQEL 334
C+D WLR CP+CK ++
Sbjct: 243 NCIDPWLRQQGTCPICKHQV 262
>gi|148694251|gb|EDL26198.1| ring finger 111 [Mus musculus]
Length = 820
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 767 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 813
>gi|15228322|ref|NP_190386.1| RING-H2 finger protein ATL48 [Arabidopsis thaliana]
gi|68565188|sp|Q7X843.2|ATL48_ARATH RecName: Full=RING-H2 finger protein ATL48; AltName:
Full=YGHL1-C3HC4 RING fusion protein
gi|4678325|emb|CAB41136.1| putative protein [Arabidopsis thaliana]
gi|30038524|dbj|BAC75820.1| YGHL1-C3HC4 RING fusion protein [Arabidopsis thaliana]
gi|332644837|gb|AEE78358.1| RING-H2 finger protein ATL48 [Arabidopsis thaliana]
Length = 349
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 9/83 (10%)
Query: 253 DKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHM 311
D G I LP + Y V +LE + +C +CL ++ + +++R LP CSH
Sbjct: 178 DSGLDQTAIDALPVFLYGNVTISLE--------QPFDCAVCLNEFSDTDKLRLLPVCSHA 229
Query: 312 FHLKCVDQWLRILSCCPLCKQEL 334
FHL C+D WL S CPLC++ L
Sbjct: 230 FHLHCIDTWLLSNSTCPLCRRSL 252
>gi|449451185|ref|XP_004143342.1| PREDICTED: putative RING-H2 finger protein ATL71-like [Cucumis
sativus]
Length = 172
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 48/87 (55%), Gaps = 9/87 (10%)
Query: 247 MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECC-ICLAKYKEKEEVRK 305
M+ D G + I+ P Y ++ L+ +S + CC ICLA YK + +R
Sbjct: 70 MDSVVVDIGLDQETITSYPKLLYS--EAKLQKNDSTAS-----CCSICLADYKNSDVLRL 122
Query: 306 LP-CSHMFHLKCVDQWLRILSCCPLCK 331
LP C H+FHLKCVD WLR+ CP+C+
Sbjct: 123 LPDCGHLFHLKCVDPWLRLHPTCPVCR 149
>gi|449440682|ref|XP_004138113.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
gi|449518937|ref|XP_004166492.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like [Cucumis sativus]
Length = 377
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 246 NMNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRK 305
+ + A + A + I LP +R K V ++ EC ICL ++ EVR
Sbjct: 202 GLYLTPAQREAVEALIEELPKFRLKAVPTDCS-----------ECPICLEEFHVGNEVRG 250
Query: 306 LPCSHMFHLKCVDQWLRILSCCPLCK 331
LPC+H FH+ C+D+WLR+ CP C+
Sbjct: 251 LPCAHNFHVGCIDEWLRLNVKCPRCR 276
>gi|414585842|tpg|DAA36413.1| TPA: putative RING zinc finger domain superfamily protein [Zea
mays]
Length = 140
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 7/86 (8%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G KG + I+ LP+ YK G + + EC IC YK ++ + KLPC
Sbjct: 60 IGTQSKGLPESVIALLPTSTYK-------TGIFSRKEKHDECVICCMAYKNRDRLTKLPC 112
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H CV +WL+I CP+C +E+
Sbjct: 113 GHHYHQACVAKWLQINKVCPVCNKEV 138
>gi|403274539|ref|XP_003929032.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia [Saimiri boliviensis
boliviensis]
Length = 994
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|15228395|ref|NP_187702.1| RING-H2 finger protein ATL72 [Arabidopsis thaliana]
gi|68565331|sp|Q9SG96.1|ATL72_ARATH RecName: Full=RING-H2 finger protein ATL72
gi|6630539|gb|AAF19558.1|AC011708_1 putative RING zinc finger protein [Arabidopsis thaliana]
gi|28466857|gb|AAO44037.1| At3g10910 [Arabidopsis thaliana]
gi|110735947|dbj|BAE99948.1| putative RING zinc finger protein [Arabidopsis thaliana]
gi|332641448|gb|AEE74969.1| RING-H2 finger protein ATL72 [Arabidopsis thaliana]
Length = 181
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 52/99 (52%), Gaps = 12/99 (12%)
Query: 239 ISSVLGYNMNMG--AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAK 296
+S+ N N+G AA G + ++P Y +++A EC ICL
Sbjct: 70 VSNASNANANLGRLAAATGLKKQALKQIPVGLYGSGIIDMKA---------TECLICLGD 120
Query: 297 YKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+++ E+VR LP C+H FH++C+D WL S CP C+Q L
Sbjct: 121 FEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCRQSL 159
>gi|403222214|dbj|BAM40346.1| uncharacterized protein TOT_020000605 [Theileria orientalis strain
Shintoku]
Length = 462
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 30/42 (71%)
Query: 290 CCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCK 331
C +CL +Y+E E+++LPC+H +H C+D WL + CP+CK
Sbjct: 412 CSVCLEEYQEGVEIKRLPCTHFYHKNCIDLWLNKSTICPICK 453
>gi|149691907|ref|XP_001500171.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 1 [Equus
caballus]
Length = 993
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 940 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|426233210|ref|XP_004010610.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 1 [Ovis
aries]
gi|426233212|ref|XP_004010611.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Ovis
aries]
Length = 994
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|410961149|ref|XP_003987147.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Felis
catus]
Length = 993
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 940 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|395822249|ref|XP_003784434.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Otolemur
garnettii]
Length = 992
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 939 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|359807415|ref|NP_001240876.1| uncharacterized protein LOC100780922 [Glycine max]
gi|255641268|gb|ACU20911.1| unknown [Glycine max]
Length = 193
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Query: 286 EDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
E +C ICLA YKE+E +R +P C H FHL C+D WLR S CP+C+
Sbjct: 86 EHTQCVICLADYKEREVLRIMPKCGHTFHLSCIDIWLRKQSTCPVCR 132
>gi|109081307|ref|XP_001098125.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 4 [Macaca
mulatta]
Length = 992
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 939 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|291402922|ref|XP_002718254.1| PREDICTED: ring finger protein 111 isoform 2 [Oryctolagus
cuniculus]
Length = 992
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 939 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|301782363|ref|XP_002926595.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia-like isoform 2
[Ailuropoda melanoleuca]
gi|281347131|gb|EFB22715.1| hypothetical protein PANDA_016265 [Ailuropoda melanoleuca]
Length = 993
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 940 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 986
>gi|156121123|ref|NP_001095709.1| E3 ubiquitin-protein ligase Arkadia [Bos taurus]
gi|151554408|gb|AAI47932.1| RNF111 protein [Bos taurus]
gi|296483228|tpg|DAA25343.1| TPA: ring finger protein 111 [Bos taurus]
Length = 994
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|383419405|gb|AFH32916.1| E3 ubiquitin-protein ligase Arkadia [Macaca mulatta]
Length = 992
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 939 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|332263048|ref|XP_003280568.1| PREDICTED: RING finger protein 44 [Nomascus leucogenys]
Length = 423
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 50/83 (60%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ ++G + C +C + ++ ++ +R LPC+H
Sbjct: 341 AKPRGLTKADIEQLPSYRFN-PDSH-QSGQTL-------CVVCFSDFEARQLLRVLPCNH 391
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 392 EFHTKCVDKWLKANRTCPICRAD 414
>gi|115495109|ref|NP_001069776.1| E3 ubiquitin-protein ligase RNF115 [Bos taurus]
gi|92096918|gb|AAI14854.1| Ring finger protein 115 [Bos taurus]
gi|296489499|tpg|DAA31612.1| TPA: Rabring 7 [Bos taurus]
gi|440903798|gb|ELR54405.1| E3 ubiquitin-protein ligase RNF115 [Bos grunniens mutus]
Length = 293
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 16/124 (12%)
Query: 213 SLLAWNALSYSFPFLLFLLLCCCVPLISSVLGYNMNMGAADKGASDDQISRLPSWR--YK 270
S +W+ + +S P +++ +LG N G A ++I+ LP+ +
Sbjct: 152 SPFSWSGMLHSNPGDYAWGQTGLDAIVTQLLGQLENTGPPP--ADKEKITSLPTVTVTQE 209
Query: 271 RVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLC 330
+VD LE C +C Y +EEVR+LPC+H FH C+ WL + CP+C
Sbjct: 210 QVDKGLE------------CPVCKEDYTVEEEVRQLPCNHYFHSSCIVPWLELHDACPVC 257
Query: 331 KQEL 334
++ L
Sbjct: 258 RKSL 261
>gi|47077491|dbj|BAD18633.1| unnamed protein product [Homo sapiens]
Length = 602
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 297
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 498 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 557
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 558 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 595
>gi|440910844|gb|ELR60597.1| E3 ubiquitin-protein ligase Arkadia [Bos grunniens mutus]
Length = 1003
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 950 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 996
>gi|432100488|gb|ELK29105.1| E3 ubiquitin-protein ligase Arkadia [Myotis davidii]
Length = 937
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 884 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 930
>gi|15809022|ref|NP_291082.1| E3 ubiquitin-protein ligase Arkadia [Mus musculus]
gi|81903227|sp|Q99ML9.1|RN111_MOUSE RecName: Full=E3 ubiquitin-protein ligase Arkadia; AltName:
Full=RING finger protein 111
gi|13676779|gb|AAK38272.1|AF330197_1 Arkadia [Mus musculus]
Length = 989
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 936 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 982
>gi|47497730|dbj|BAD19795.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 195
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 10/84 (11%)
Query: 252 ADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSH 310
A+ G + I LP+ Y+R DP C +CL + E VR LP C H
Sbjct: 92 AECGLTAAAIDALPASEYERPRGG---------GGDPACSVCLEDVRGGETVRWLPACGH 142
Query: 311 MFHLKCVDQWLRILSCCPLCKQEL 334
++H C+D WLR + CPLC+ +L
Sbjct: 143 LYHAACIDAWLRSRTTCPLCRSDL 166
>gi|300794460|ref|NP_001179642.1| RING finger protein 44 [Bos taurus]
gi|296485561|tpg|DAA27676.1| TPA: ring finger protein 44 [Bos taurus]
Length = 432
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRF-HPDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|18088108|gb|AAH20984.1| RNF111 protein, partial [Homo sapiens]
Length = 441
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 297
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 337 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 396
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 397 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 434
>gi|426379249|ref|XP_004056314.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Gorilla
gorilla gorilla]
Length = 994
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|426351155|ref|XP_004043123.1| PREDICTED: RING finger protein 44 [Gorilla gorilla gorilla]
Length = 413
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 331 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 381
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 382 EFHTKCVDKWLKANRTCPICRAD 404
>gi|397515417|ref|XP_003827948.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Pan
paniscus]
Length = 992
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 939 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 985
>gi|395822253|ref|XP_003784436.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 4 [Otolemur
garnettii]
Length = 1001
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 948 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 994
>gi|311249623|ref|XP_003123707.1| PREDICTED: RING finger protein 44 isoform 1 [Sus scrofa]
Length = 432
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRF-HPDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|301787345|ref|XP_002929081.1| PREDICTED: e3 ubiquitin-protein ligase RNF167-like [Ailuropoda
melanoleuca]
Length = 350
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 257 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
+ DQ+ ++P+ Y++ D + C ICL +Y++ +++R LPC+H +H +C
Sbjct: 209 TKDQLKQIPTHDYQKGD------------QYDVCAICLDEYEDGDKLRVLPCAHAYHSRC 256
Query: 317 VDQWL-RILSCCPLCKQELER 336
VD WL + CP+CKQ + R
Sbjct: 257 VDPWLTQTRKTCPICKQPVHR 277
>gi|168015517|ref|XP_001760297.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688677|gb|EDQ75053.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 183
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 1/55 (1%)
Query: 278 AGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCK 331
A + P +D C ICL YK+ + +R LP C HMFH C+D WLR+ + CP+C+
Sbjct: 98 ASQALPHLQDTSCSICLGDYKDGDTLRMLPECRHMFHALCIDAWLRLHASCPMCR 152
>gi|222631461|gb|EEE63593.1| hypothetical protein OsJ_18410 [Oryza sativa Japonica Group]
Length = 521
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+ RLP Y+R + E +C ICL +Y E + VR LPC+H FHL CVD+W
Sbjct: 442 VERLPVKVYRRSLKHQ-------TEEAAQCYICLVEYAEGDCVRILPCNHEFHLTCVDKW 494
Query: 321 LR-ILSCCPLCKQEL 334
L+ I CPLC+ ++
Sbjct: 495 LKEIHRVCPLCRGDV 509
>gi|125552196|gb|EAY97905.1| hypothetical protein OsI_19822 [Oryza sativa Indica Group]
Length = 521
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 8/75 (10%)
Query: 261 ISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQW 320
+ RLP Y+R + E +C ICL +Y E + VR LPC+H FHL CVD+W
Sbjct: 442 VERLPVKVYRRSLKHQ-------TEEAAQCYICLVEYAEGDCVRILPCNHEFHLTCVDKW 494
Query: 321 LR-ILSCCPLCKQEL 334
L+ I CPLC+ ++
Sbjct: 495 LKEIHRVCPLCRGDV 509
>gi|449469531|ref|XP_004152473.1| PREDICTED: E3 ubiquitin-protein ligase SIS3-like isoform 2 [Cucumis
sativus]
Length = 281
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 51/93 (54%), Gaps = 13/93 (13%)
Query: 244 GYN--MNMGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKE 301
GY+ + + +A + A + I LP +R K V ++ EC ICL ++
Sbjct: 131 GYHPGLFLTSAQREAVEALIQELPKFRLKAVPTDCS-----------ECPICLEEFHVGN 179
Query: 302 EVRKLPCSHMFHLKCVDQWLRILSCCPLCKQEL 334
EVR +PC+H FH++C+D+WLR+ CP C+ +
Sbjct: 180 EVRGMPCAHNFHVECIDEWLRLNVKCPRCRSSV 212
>gi|402874436|ref|XP_003901044.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia-like [Papio anubis]
Length = 601
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 53/98 (54%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSN----------LEAGNSAPANEDPECCICLAKY 297
+G ++GAS I R +YK+V ++ + + + +C ICL+
Sbjct: 497 LGNVNRGASQGTIERCTYPHKYKKVTTDWFSQRKLHCKQDGEEGTEEDTEEKCTICLSIL 556
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 557 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 594
>gi|357444873|ref|XP_003592714.1| RING finger protein [Medicago truncatula]
gi|355481762|gb|AES62965.1| RING finger protein [Medicago truncatula]
Length = 339
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D I+ LPS YK L + +S C IC Y++ E + L C
Sbjct: 255 VGTESRGLSTDTIACLPSVNYKAGSDQLGSNDS--------CVICRVDYEDDESLTVLSC 306
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H++H +C++ WL+I CP+C E+
Sbjct: 307 KHLYHPECINNWLKINKVCPVCSTEV 332
>gi|335283091|ref|XP_003354234.1| PREDICTED: RING finger protein 44 isoform 2 [Sus scrofa]
Length = 351
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 269 AKPRGLTKADIEQLPSYRF-HPDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 319
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|326526351|dbj|BAJ97192.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 285 NEDPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLR-ILSCCPLCKQEL 334
+E +C ICL +Y+E + +R LPC+H FHL CVD+WL+ I CPLC+ ++
Sbjct: 501 DETAQCYICLVEYEEGDCIRILPCNHEFHLTCVDKWLKEIHRVCPLCRGDV 551
>gi|217075118|gb|ACJ85919.1| unknown [Medicago truncatula]
gi|388515517|gb|AFK45820.1| unknown [Medicago truncatula]
Length = 339
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 45/86 (52%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G +G S D I+ LPS YK L + +S C IC Y++ E + L C
Sbjct: 255 VGTESRGLSTDTIACLPSVNYKAGSDQLGSNDS--------CVICRVDYEDDESLTVLSC 306
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H++H +C++ WL+I CP+C E+
Sbjct: 307 KHLYHPECINNWLKINKVCPVCSTEV 332
>gi|395455085|ref|NP_001257459.1| E3 ubiquitin-protein ligase Arkadia isoform 4 [Homo sapiens]
gi|308153555|sp|Q6ZNA4.3|RN111_HUMAN RecName: Full=E3 ubiquitin-protein ligase Arkadia; AltName:
Full=RING finger protein 111
gi|119597964|gb|EAW77558.1| ring finger protein 111, isoform CRA_d [Homo sapiens]
Length = 994
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|449270595|gb|EMC81254.1| E3 ubiquitin-protein ligase Arkadia [Columba livia]
Length = 1000
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 947 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 993
>gi|7662486|ref|NP_055716.1| RING finger protein 44 [Homo sapiens]
gi|74758994|sp|Q7L0R7.1|RNF44_HUMAN RecName: Full=RING finger protein 44
gi|24980826|gb|AAH39833.1| Ring finger protein 44 [Homo sapiens]
gi|38969938|gb|AAH63297.1| Ring finger protein 44 [Homo sapiens]
gi|119605477|gb|EAW85071.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|119605478|gb|EAW85072.1| ring finger protein 44, isoform CRA_b [Homo sapiens]
gi|168269688|dbj|BAG09971.1| RING finger protein 44 [synthetic construct]
Length = 432
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|242036907|ref|XP_002465848.1| hypothetical protein SORBIDRAFT_01g046940 [Sorghum bicolor]
gi|241919702|gb|EER92846.1| hypothetical protein SORBIDRAFT_01g046940 [Sorghum bicolor]
Length = 317
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 277 EAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQEL 334
+AG AP EC +CL+++ E+E VR LP CSH FH+ C+D WL+ + CP C+ ++
Sbjct: 121 DAGGLAPRISVSECAVCLSEFVERERVRLLPNCSHAFHIDCIDTWLQGSARCPFCRSDV 179
>gi|114657301|ref|XP_001172710.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 5 [Pan
troglodytes]
gi|410221202|gb|JAA07820.1| ring finger protein 111 [Pan troglodytes]
gi|410252216|gb|JAA14075.1| ring finger protein 111 [Pan troglodytes]
Length = 994
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|74180382|dbj|BAE32356.1| unnamed protein product [Mus musculus]
Length = 347
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 47/81 (58%), Gaps = 13/81 (16%)
Query: 257 SDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHLKC 316
+ +Q+ ++P+ Y++ D E C ICL +Y++ +++R LPC+H +H +C
Sbjct: 209 TKEQLKQIPTHDYQKGD------------EYDVCAICLDEYEDGDKLRVLPCAHAYHSRC 256
Query: 317 VDQWL-RILSCCPLCKQELER 336
VD WL + CP+CKQ + R
Sbjct: 257 VDPWLTQTRKTCPICKQPVHR 277
>gi|380815360|gb|AFE79554.1| E3 ubiquitin-protein ligase RNF6 [Macaca mulatta]
Length = 685
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/106 (28%), Positives = 54/106 (50%), Gaps = 11/106 (10%)
Query: 230 LLLCCCVPLISSVLGYNMNMGAAD---KGASDDQISRLPSWRYKRVDSNLEAGNSAPANE 286
L+ +P++ + +N G D +G + +QI L + Y+ + + E G
Sbjct: 577 LVETGTLPILRLAHFFLLNEGDDDDRIRGLTKEQIDNLSTRHYEHNNIDSELGKI----- 631
Query: 287 DPECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQ 332
C +C++ Y ++R+LPC H FH+ C+D+WL CP+C+Q
Sbjct: 632 ---CSVCISDYVTGNKLRQLPCMHEFHIHCIDRWLSENCTCPICRQ 674
>gi|332235796|ref|XP_003267090.1| PREDICTED: E3 ubiquitin-protein ligase Arkadia isoform 2 [Nomascus
leucogenys]
Length = 994
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 941 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 987
>gi|349603293|gb|AEP99174.1| E3 ubiquitin-protein ligase Arkadia-like protein, partial [Equus
caballus]
Length = 105
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 52 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 98
>gi|355716966|gb|AES05780.1| ring finger protein 44 [Mustela putorius furo]
Length = 431
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|359491594|ref|XP_003634293.1| PREDICTED: RING-H2 finger protein ATL48-like [Vitis vinifera]
Length = 146
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 48/83 (57%), Gaps = 7/83 (8%)
Query: 250 GAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-C 308
G+ G S D++ +LP + YK V LE +++P +C +CL +++ ++ R LP C
Sbjct: 43 GSGGLGMSQDELKKLPCFEYKAV--ALEKASNSPV----DCAVCLENFRKGDKCRLLPNC 96
Query: 309 SHMFHLKCVDQWLRILSCCPLCK 331
H FH +C+D WL CP+C+
Sbjct: 97 KHFFHSQCIDSWLLKTPICPICR 119
>gi|357120498|ref|XP_003561964.1| PREDICTED: E3 ubiquitin-protein ligase Os03g0188200-like
[Brachypodium distachyon]
Length = 383
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/82 (35%), Positives = 44/82 (53%), Gaps = 5/82 (6%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G + + P+ Y V S + S P EC +CLA++ + +E+R LP C H+F
Sbjct: 117 RGLDRELVEAFPTAVYGDVKSRMATNKSGPL----ECAVCLAEFDDADELRILPACCHVF 172
Query: 313 HLKCVDQWLRILSCCPLCKQEL 334
H C+D WL CPLC+ +L
Sbjct: 173 HPGCIDPWLAAAVTCPLCRADL 194
>gi|402873507|ref|XP_003900615.1| PREDICTED: RING finger protein 44 isoform 2 [Papio anubis]
Length = 351
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 269 AKPRGLTKADIEQLPSYRFNP-DSH--------QSEQTLCVVCFSDFETRQLLRVLPCNH 319
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|125524889|gb|EAY73003.1| hypothetical protein OsI_00875 [Oryza sativa Indica Group]
Length = 184
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 45/86 (52%), Gaps = 11/86 (12%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CS 309
A G S I+ LP++ Y+ + +C +CL + E+VR+LP C
Sbjct: 69 ANSHGMSAAAIAALPTFGYEASAAAAAL----------DCAVCLGQVDAGEKVRQLPKCG 118
Query: 310 HMFHLKCVDQWLRILSCCPLCKQELE 335
H+FH +CVD WLR S CP+C+ +E
Sbjct: 119 HLFHAECVDGWLRAHSTCPMCRAAVE 144
>gi|397470558|ref|XP_003806886.1| PREDICTED: LOW QUALITY PROTEIN: RING finger protein 44 [Pan
paniscus]
Length = 432
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 350 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 400
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 401 EFHTKCVDKWLKANRTCPICRAD 423
>gi|302755246|ref|XP_002961047.1| hypothetical protein SELMODRAFT_71236 [Selaginella moellendorffii]
gi|300171986|gb|EFJ38586.1| hypothetical protein SELMODRAFT_71236 [Selaginella moellendorffii]
Length = 291
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%), Gaps = 9/80 (11%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
G + ++ LP++ Y+R + ++ C IC+ +Y++ +++R LPC H FH
Sbjct: 202 GLTSSEVRSLPTFVYRRAGDGDDQADT--------CVICMEEYEDGQKLRVLPCRHAFHA 253
Query: 315 KCVDQWLRILS-CCPLCKQE 333
CVDQWL CP+CK++
Sbjct: 254 ACVDQWLVTRKPFCPVCKRD 273
>gi|118404362|ref|NP_001072805.1| E3 ubiquitin-protein ligase arkadia [Xenopus (Silurana) tropicalis]
gi|123914777|sp|Q0V9R0.1|RN111_XENTR RecName: Full=E3 ubiquitin-protein ligase arkadia; AltName:
Full=RING finger protein 111
gi|111305672|gb|AAI21429.1| ring finger protein 111 [Xenopus (Silurana) tropicalis]
Length = 954
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 11/98 (11%)
Query: 249 MGAADKGASDDQISRLP-SWRYKRVDSNLEAGNSAPANED----------PECCICLAKY 297
+G ++GAS I R +Y++V ++ + + +D +C ICL+
Sbjct: 850 LGNVNRGASQGTIERCTYPHKYEKVSTDWFSQRKLHSKQDGEEATEEDTEEKCTICLSIL 909
Query: 298 KEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+E E+VR+LPC H+FH CVDQWL CP+C+ +++
Sbjct: 910 EEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDID 947
>gi|410040033|ref|XP_001136491.3| PREDICTED: RING finger protein 44 isoform 2 [Pan troglodytes]
Length = 430
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 348 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 398
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 399 EFHTKCVDKWLKANRTCPICRAD 421
>gi|40789045|dbj|BAA83052.2| KIAA1100 protein [Homo sapiens]
Length = 444
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 362 AKPRGLTKADIEQLPSYRFN-PDSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 412
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 413 EFHTKCVDKWLKANRTCPICRAD 435
>gi|351696258|gb|EHA99176.1| E3 ubiquitin-protein ligase Arkadia [Heterocephalus glaber]
Length = 997
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 944 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 990
>gi|147858036|emb|CAN80353.1| hypothetical protein VITISV_003141 [Vitis vinifera]
Length = 209
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 46/82 (56%), Gaps = 9/82 (10%)
Query: 254 KGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMF 312
+G + LP ++K+ N P++ + +C +CL +++E E ++ LP CSH+F
Sbjct: 32 RGLDSSTVYSLPIAQFKK--------NEGPSHSNTDCAVCLGEFEEGEFLKHLPNCSHVF 83
Query: 313 HLKCVDQWLRILSCCPLCKQEL 334
H+ C+D W S CPLC+ +
Sbjct: 84 HIPCIDTWFESHSNCPLCRSHV 105
>gi|301611422|ref|XP_002935238.1| PREDICTED: hypothetical protein LOC100491274 [Xenopus (Silurana)
tropicalis]
Length = 654
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 44/76 (57%), Gaps = 6/76 (7%)
Query: 261 ISRLPSWRYKR---VDSNLEAG---NSAPANEDPECCICLAKYKEKEEVRKLPCSHMFHL 314
ISRL + RY++ D G ++ ++ P C ICL ++ + +E+R LPC H +HL
Sbjct: 233 ISRLGTRRYQQRMLKDQRASGGWVETASTSSSVPVCAICLEEFTDGQELRILPCCHEYHL 292
Query: 315 KCVDQWLRILSCCPLC 330
CVD WLR CPLC
Sbjct: 293 GCVDPWLRQNHTCPLC 308
>gi|194379472|dbj|BAG63702.1| unnamed protein product [Homo sapiens]
Length = 351
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 269 AKPRGLTKADIEQLPSYRFNP-DSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 319
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 320 EFHTKCVDKWLKANRTCPICRAD 342
>gi|126277151|ref|XP_001368112.1| PREDICTED: e3 ubiquitin-protein ligase Arkadia isoform 2
[Monodelphis domestica]
Length = 990
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 937 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 983
>gi|157819973|ref|NP_001100306.1| E3 ubiquitin-protein ligase Arkadia [Rattus norvegicus]
gi|149028844|gb|EDL84185.1| ring finger protein 111 (predicted) [Rattus norvegicus]
Length = 987
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/47 (51%), Positives = 34/47 (72%)
Query: 289 ECCICLAKYKEKEEVRKLPCSHMFHLKCVDQWLRILSCCPLCKQELE 335
+C ICL+ +E E+VR+LPC H+FH CVDQWL CP+C+ ++E
Sbjct: 934 KCTICLSILEEGEDVRRLPCMHLFHQVCVDQWLITNKKCPICRVDIE 980
>gi|52545897|emb|CAD39147.2| hypothetical protein [Homo sapiens]
Length = 354
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 28/83 (33%), Positives = 48/83 (57%), Gaps = 9/83 (10%)
Query: 251 AADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPCSH 310
A +G + I +LPS+R+ DS+ +E C +C + ++ ++ +R LPC+H
Sbjct: 272 AKPRGLTKADIEQLPSYRFNP-DSH--------QSEQTLCVVCFSDFEARQLLRVLPCNH 322
Query: 311 MFHLKCVDQWLRILSCCPLCKQE 333
FH KCVD+WL+ CP+C+ +
Sbjct: 323 EFHTKCVDKWLKANRTCPICRAD 345
>gi|357517007|ref|XP_003628792.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
gi|355522814|gb|AET03268.1| hypothetical protein MTR_8g066780 [Medicago truncatula]
Length = 356
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLP-CSHMFH 313
G D QI + + YK+ G++ + +C +CL+++++ E VR LP C+H+FH
Sbjct: 114 GLDDAQIKSIAVFSYKK-------GDAFFSTTVTDCSVCLSEFQDDESVRLLPMCNHVFH 166
Query: 314 LKCVDQWLRILSCCPLCKQEL 334
L C+D WL+ S CPLC+ +
Sbjct: 167 LPCIDTWLKSNSSCPLCRSSV 187
>gi|242093184|ref|XP_002437082.1| hypothetical protein SORBIDRAFT_10g020970 [Sorghum bicolor]
gi|241915305|gb|EER88449.1| hypothetical protein SORBIDRAFT_10g020970 [Sorghum bicolor]
Length = 328
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 14/95 (14%)
Query: 255 GASDDQISRLPSWRYKRVDSNLEA-----------GNSAP--ANEDPECCICLAKYKEKE 301
G S D I+ LP++ Y+ D++ G + P A EC +CL + ++ +
Sbjct: 75 GLSADDIAALPTFTYRARDASASPSHGGGRRSRSKGRTTPGRAGAAVECVVCLQEMEDGD 134
Query: 302 EVRKLP-CSHMFHLKCVDQWLRILSCCPLCKQELE 335
VR LP C H FH C+D WLR S CP+C+ E
Sbjct: 135 VVRVLPACRHFFHGGCIDAWLRAHSTCPVCRAHPE 169
>gi|255561042|ref|XP_002521533.1| ring finger protein, putative [Ricinus communis]
gi|223539211|gb|EEF40804.1| ring finger protein, putative [Ricinus communis]
Length = 316
Score = 61.6 bits (148), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 46/86 (53%), Gaps = 8/86 (9%)
Query: 249 MGAADKGASDDQISRLPSWRYKRVDSNLEAGNSAPANEDPECCICLAKYKEKEEVRKLPC 308
+G+ +G S D I+ LP+ YK AG+S D C IC Y++ E + L C
Sbjct: 233 VGSESRGLSADTIASLPTVNYK-------AGSSQNGTNDS-CVICRLDYEDGETLTLLSC 284
Query: 309 SHMFHLKCVDQWLRILSCCPLCKQEL 334
H +H +C++ WL+I CP+C E+
Sbjct: 285 KHSYHSECINNWLKINKVCPVCSTEV 310
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.325 0.136 0.441
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,302,399,067
Number of Sequences: 23463169
Number of extensions: 210331366
Number of successful extensions: 681273
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 8708
Number of HSP's successfully gapped in prelim test: 3307
Number of HSP's that attempted gapping in prelim test: 667627
Number of HSP's gapped (non-prelim): 13123
length of query: 336
length of database: 8,064,228,071
effective HSP length: 143
effective length of query: 193
effective length of database: 9,003,962,200
effective search space: 1737764704600
effective search space used: 1737764704600
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 77 (34.3 bits)