BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>019724
MGSRALDITVVSASDLKTAGMFSKMNVYAVVTIFGESQTTSVARDCGVRPTWNHQMRFNI
DEAAAMQNNLTIVYSIRSTGGCFGNSDLGEVFVPVKEMLLRSNGDDDKPMSYNITTPGGR
AKGVLNVSYKFGPSSSANNNNNNNNNNNANQSNDNPGMAYAPQPPPPMPQGYANPTAYPA
PQKDVYPPPPDAHKAALAYPAPGYPPQPQAYPLPGGYPPPGYAAGAPAPPHPGGYAPVQG
PGGMNYQPSPPGSAMGPAGYAYAAPPAAPQQHSKNSNNSIKKKGMAAGLGLGMGAGLLGG
LAGGLTLAAAGGGGDGVNFGDYGGEEIEGSVDGEYR

High Scoring Gene Products

Symbol, full name Information P value
SRC2
AT1G09070
protein from Arabidopsis thaliana 3.4e-29
AT3G16510 protein from Arabidopsis thaliana 2.2e-21
AT4G15755 protein from Arabidopsis thaliana 7.7e-16
AT3G62780 protein from Arabidopsis thaliana 4.4e-14
AT3G55470 protein from Arabidopsis thaliana 6.1e-07
AT3G05440 protein from Arabidopsis thaliana 0.00014
AT1G63220 protein from Arabidopsis thaliana 0.00031

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  019724
        (336 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2036004 - symbol:SRC2 "AT1G09070" species:3702...   324  3.4e-29   1
TAIR|locus:2088334 - symbol:AT3G16510 "AT3G16510" species...   223  2.2e-21   2
TAIR|locus:504955431 - symbol:AT4G15755 "AT4G15755" speci...   198  7.7e-16   1
TAIR|locus:2081745 - symbol:AT3G62780 "AT3G62780" species...   183  4.4e-14   1
TAIR|locus:2099946 - symbol:AT3G55470 "AT3G55470" species...   114  6.1e-07   1
TAIR|locus:2079762 - symbol:AT3G05440 "AT3G05440" species...    94  0.00014   1
TAIR|locus:2038461 - symbol:AT1G63220 "AT1G63220" species...   100  0.00031   1


>TAIR|locus:2036004 [details] [associations]
            symbol:SRC2 "AT1G09070" species:3702 "Arabidopsis
            thaliana" [GO:0000326 "protein storage vacuole" evidence=IDA]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006623 "protein
            targeting to vacuole" evidence=RCA;TAS] [GO:0006612 "protein
            targeting to membrane" evidence=RCA] [GO:0006820 "anion transport"
            evidence=RCA] [GO:0006862 "nucleotide transport" evidence=RCA]
            [GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=RCA]
            [GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009611
            "response to wounding" evidence=RCA] [GO:0009612 "response to
            mechanical stimulus" evidence=RCA] [GO:0009646 "response to absence
            of light" evidence=RCA] [GO:0010200 "response to chitin"
            evidence=RCA] [GO:0010363 "regulation of plant-type hypersensitive
            response" evidence=RCA] [GO:0015696 "ammonium transport"
            evidence=RCA] [GO:0015802 "basic amino acid transport"
            evidence=RCA] [GO:0043069 "negative regulation of programmed cell
            death" evidence=RCA] [GO:0043090 "amino acid import" evidence=RCA]
            [GO:0043269 "regulation of ion transport" evidence=RCA] [GO:0005886
            "plasma membrane" evidence=IDA] InterPro:IPR000008
            InterPro:IPR008973 Pfam:PF00168 SMART:SM00239 GO:GO:0005783
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005886
            SUPFAM:SSF49562 EMBL:AC000106 GO:GO:0006623 UniGene:At.71449
            GO:GO:0000326 UniGene:At.24245 EMBL:AY045580 EMBL:AY142027
            IPI:IPI00527850 PIR:G86222 RefSeq:NP_563835.1 UniGene:At.31705
            UniGene:At.5402 UniGene:At.74046 ProteinModelPortal:O04023
            SMR:O04023 STRING:O04023 PaxDb:O04023 PRIDE:O04023
            EnsemblPlants:AT1G09070.1 GeneID:837428 KEGG:ath:AT1G09070
            TAIR:At1g09070 eggNOG:NOG246378 HOGENOM:HOG000238638
            InParanoid:O04023 OMA:QGPYGYP PhylomeDB:O04023
            ProtClustDB:CLSN2916988 Genevestigator:O04023 Uniprot:O04023
        Length = 324

 Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
 Identities = 61/135 (45%), Positives = 92/135 (68%)

Query:     1 MGSRALDITVVSASDLKTAGMFSKMNVYAVVTIFGESQT---TSVARDCGVRPTWNHQMR 57
             M  R+LD+T++SA DLK   +  K ++YAVV+I G+++T   T V +DCG +P W HQM+
Sbjct:     1 MECRSLDLTIISAEDLKDVQLIGKQDLYAVVSINGDARTKQKTKVDKDCGTKPKWKHQMK 60

Query:    58 FNIDEAAAMQNNLTIVYSIRSTGGCFGNSDLGEVFVPVKEMLLRSNGDDDKPMSYNITTP 117
               +D+AAA  N LT+V+ I +     G+  +GEV VPVKE+L ++ GD++K ++Y +  P
Sbjct:    61 LTVDDAAARDNRLTLVFEIVADRPIAGDKPVGEVSVPVKELLDQNKGDEEKTVTYAVRLP 120

Query:   118 GGRAKGVLNVSYKFG 132
              G+AKG L  S+KFG
Sbjct:   121 NGKAKGSLKFSFKFG 135


>TAIR|locus:2088334 [details] [associations]
            symbol:AT3G16510 "AT3G16510" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002686 GenomeReviews:BA000014_GR
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AP000373
            eggNOG:NOG246378 HOGENOM:HOG000238638 EMBL:BT011231 EMBL:BT012159
            IPI:IPI00528915 RefSeq:NP_188272.1 UniGene:At.38885
            ProteinModelPortal:Q9LK74 SMR:Q9LK74 EnsemblPlants:AT3G16510.1
            GeneID:820899 KEGG:ath:AT3G16510 TAIR:At3g16510 InParanoid:Q9LK74
            OMA:KADAYAP PhylomeDB:Q9LK74 ProtClustDB:CLSN2913353
            Genevestigator:Q9LK74 Uniprot:Q9LK74
        Length = 360

 Score = 223 (83.6 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
 Identities = 55/145 (37%), Positives = 80/145 (55%)

Query:     1 MGSRALDITVVSASDLKTAGMFSKMNVYAVVTIFGES------QTTSVARDCGVRPTWNH 54
             M +  L++ V SA DL+   + +KM+VYAVV I G+       + T + R     PTWNH
Sbjct:     1 MANLTLELNVYSAKDLENVNLITKMDVYAVVWITGDDSRKNHKEKTPIDRTGESEPTWNH 60

Query:    55 QMRFNIDEAAAMQNNLTIVYSIRSTGGCFGNSDLGEVFVPVKEMLL-----RSNGDDDKP 109
              ++F++D+  A +  LT+V  +      FG+ DLGEV VPV E+L       SNGD    
Sbjct:    61 TVKFSVDQRLAHEGRLTLVVKL-VCDRIFGDKDLGEVQVPVLELLHGSSSPSSNGDGQGM 119

Query:   110 M---SYNITTPGGRAKGVLNVSYKF 131
             M   +Y + TP G+ +G L  SY+F
Sbjct:   120 MRFVTYQVRTPFGKGQGSLTFSYRF 144

 Score = 46 (21.3 bits), Expect = 2.2e-21, Sum P(2) = 2.2e-21
 Identities = 8/13 (61%), Positives = 8/13 (61%)

Query:   178 YPAPQKDVYPPPP 190
             YP     VYPPPP
Sbjct:   234 YPEQPVAVYPPPP 246

 Score = 44 (20.5 bits), Expect = 3.6e-21, Sum P(2) = 3.6e-21
 Identities = 7/10 (70%), Positives = 7/10 (70%)

Query:   181 PQKDVYPPPP 190
             PQ   YPPPP
Sbjct:   263 PQHQSYPPPP 272

 Score = 36 (17.7 bits), Expect = 2.4e-20, Sum P(2) = 2.4e-20
 Identities = 7/15 (46%), Positives = 9/15 (60%)

Query:   178 YPAPQ---KDVYPPP 189
             YP P     ++YPPP
Sbjct:   242 YPPPPPSASNLYPPP 256


>TAIR|locus:504955431 [details] [associations]
            symbol:AT4G15755 "AT4G15755" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002687 InterPro:IPR018029 SUPFAM:SSF49562
            PROSITE:PS50004 IPI:IPI00525421 RefSeq:NP_680701.1 UniGene:At.65385
            ProteinModelPortal:F4JK83 EnsemblPlants:AT4G15755.1 GeneID:827254
            KEGG:ath:AT4G15755 OMA:GHANNYA Uniprot:F4JK83
        Length = 289

 Score = 198 (74.8 bits), Expect = 7.7e-16, P = 7.7e-16
 Identities = 49/147 (33%), Positives = 80/147 (54%)

Query:     1 MGSRALDITVVSASDLKTAGMFSKMNVYAVVTIFGESQT------TSVARDCGVRPTWNH 54
             M +  L++ + SA +L    + +KMNV+  +TI GE+        T+V R  G  PTWN 
Sbjct:     1 MANLTLELNINSARNLLNVNLITKMNVFTAITINGENTRKKQKAKTTVDRYGGSNPTWNQ 60

Query:    55 QMRFNIDEAAAMQNNLTIVYSIRSTGGCFGNSDLGEVFVPVKEMLLRS----NGDDD--- 107
              ++F++DE +A   + ++V  + S     GN ++G V +P+ E+L  +    NGD +   
Sbjct:    61 TIKFSVDERSARGGHSSLVMRVISRR-VLGNKEIGRVNIPLLELLNATTPSFNGDGNDHE 119

Query:   108 -KPMSYNITTPGGRAKGVLNVSYKFGP 133
              K MSY + T  G+  G L+ SY+F P
Sbjct:   120 MKLMSYQVRTSSGKRSGSLSFSYRFKP 146


>TAIR|locus:2081745 [details] [associations]
            symbol:AT3G62780 "AT3G62780" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002686 EMBL:AL162651 InterPro:IPR018029
            SUPFAM:SSF49562 PROSITE:PS50004 EMBL:BT011570 EMBL:BT012259
            IPI:IPI00548367 PIR:T48067 RefSeq:NP_191837.1 UniGene:At.34055
            ProteinModelPortal:Q9LZI7 SMR:Q9LZI7 PRIDE:Q9LZI7
            EnsemblPlants:AT3G62780.1 GeneID:825453 KEGG:ath:AT3G62780
            TAIR:At3g62780 InParanoid:Q9LZI7 OMA:NGPVLSQ PhylomeDB:Q9LZI7
            ProtClustDB:CLSN2913438 Genevestigator:Q9LZI7 Uniprot:Q9LZI7
        Length = 298

 Score = 183 (69.5 bits), Expect = 4.4e-14, P = 4.4e-14
 Identities = 55/144 (38%), Positives = 76/144 (52%)

Query:     1 MGSRALDITVVSASDLKTAGMFSKMNVYAVVTIFGE-------SQTTSVARDCGVRPTW- 52
             MG+R+L+I V SA  LK     SKM+V+  V + G+        Q T  ARD G  P W 
Sbjct:     1 MGTRSLEINVTSAKGLKKV---SKMDVFVAVKLSGDPKCSDHREQRTQAARDGGTSPKWS 57

Query:    53 NHQMRFNIDEAAAMQNNLTIVYSIR--STGGCFGNSDLGEVFVPVKEMLLRSNGDDDKPM 110
             N  M+F +D+  A  N L I + I+    GG   + D+GEV V VKE LL   G+D    
Sbjct:    58 NDVMKFILDQNLAEANRLVITFKIKCEQRGGV--DKDIGEVHVQVKE-LLDHLGNDKTGQ 114

Query:   111 SYNITTPGGRAKGVLNVSYKF-GP 133
              Y +T   G++K  ++ +Y F GP
Sbjct:   115 RY-VTYQIGKSKADISFTYSFTGP 137


>TAIR|locus:2099946 [details] [associations]
            symbol:AT3G55470 "AT3G55470" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
            "biological_process" evidence=ND] [GO:0006612 "protein targeting to
            membrane" evidence=RCA] [GO:0009963 "positive regulation of
            flavonoid biosynthetic process" evidence=RCA] [GO:0010363
            "regulation of plant-type hypersensitive response" evidence=RCA]
            InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168 SMART:SM00239
            EMBL:CP002686 GenomeReviews:BA000014_GR InterPro:IPR018029
            SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AL132975 HOGENOM:HOG000005983
            UniGene:At.26631 UniGene:At.35023 EMBL:BT025730 EMBL:AK117139
            IPI:IPI00530875 PIR:T47686 RefSeq:NP_191107.1
            ProteinModelPortal:Q9M2T2 SMR:Q9M2T2 STRING:Q9M2T2 PRIDE:Q9M2T2
            EnsemblPlants:AT3G55470.1 GeneID:824713 KEGG:ath:AT3G55470
            TAIR:At3g55470 InParanoid:Q9M2T2 OMA:NEVFKFQ PhylomeDB:Q9M2T2
            ProtClustDB:CLSN2685296 Genevestigator:Q9M2T2 Uniprot:Q9M2T2
        Length = 156

 Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
 Identities = 35/132 (26%), Positives = 65/132 (49%)

Query:     6 LDITVVSASDLKTAGMFSKMNVYAVVTIFGESQTTSVARDCGVR-PTWNHQMRFNID-EA 63
             L+++++S   LK +    K++ Y  +   G+++ +SVA++ G R PTWN ++++  +   
Sbjct:     6 LEVSLISGKGLKRSDFLGKIDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKWRAEFPG 65

Query:    64 AAMQNNLTIVYSIRSTGGCFGNSD-LGEVFVPVKEML---LRSNGDDDKPMSYNITTPGG 119
             +     L +      T   F + D +GE  V VKE+L   +     + +P  YNI     
Sbjct:    66 SGADYKLIVKVMDHDT---FSSDDFIGEATVHVKELLEMGVEKGTAELRPTKYNIVDSDL 122

Query:   120 RAKG--VLNVSY 129
                G  ++ VSY
Sbjct:   123 SFVGELLIGVSY 134


>TAIR|locus:2079762 [details] [associations]
            symbol:AT3G05440 "AT3G05440" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
            "cellular_component" evidence=ND] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002686 GenomeReviews:BA000014_GR
            SUPFAM:SSF49562 EMBL:AC009606 IPI:IPI00521198 RefSeq:NP_187195.1
            UniGene:At.53188 ProteinModelPortal:Q9MA57
            EnsemblPlants:AT3G05440.1 GeneID:819709 KEGG:ath:AT3G05440
            TAIR:At3g05440 eggNOG:NOG241532 HOGENOM:HOG000153258 OMA:HEPSAPC
            PhylomeDB:Q9MA57 ProtClustDB:CLSN2914798 Genevestigator:Q9MA57
            Uniprot:Q9MA57
        Length = 122

 Score = 94 (38.1 bits), Expect = 0.00014, P = 0.00014
 Identities = 26/93 (27%), Positives = 48/93 (51%)

Query:     6 LDITVVSASDLKTAGMFSKMNVYAVVTIF-G--ESQTTSVARDCGVRPTWNHQMRFNIDE 62
             ++I V+SA DL +  +  +  VY  V++  G  + Q T  A        WN++M+F I++
Sbjct:     7 VEINVLSAQDLNSINLLFRPTVYVSVSVTRGSRDKQVTPAAAWDKKFLRWNYRMKFYIED 66

Query:    63 AAAMQNNLTIVYSIRSTGGCFGNSDL-GEVFVP 94
                 +N    V+ I+     FG+  + G++F+P
Sbjct:    67 DKVRRNESVFVFQIKCKR-FFGSDQVVGKLFIP 98


>TAIR|locus:2038461 [details] [associations]
            symbol:AT1G63220 "AT1G63220" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] InterPro:IPR000008 InterPro:IPR008973 Pfam:PF00168
            SMART:SM00239 EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC022355
            InterPro:IPR018029 SUPFAM:SSF49562 PROSITE:PS50004 EMBL:AY054623
            EMBL:AY081504 EMBL:AY085843 IPI:IPI00525156 PIR:H96657
            RefSeq:NP_176511.1 UniGene:At.24672 PDB:1WFJ PDBsum:1WFJ
            ProteinModelPortal:Q9C8S6 SMR:Q9C8S6 PaxDb:Q9C8S6 PRIDE:Q9C8S6
            EnsemblPlants:AT1G63220.1 GeneID:842627 KEGG:ath:AT1G63220
            TAIR:At1g63220 eggNOG:NOG289233 HOGENOM:HOG000005983
            InParanoid:Q9C8S6 OMA:GLENTDF PhylomeDB:Q9C8S6
            ProtClustDB:CLSN2682388 EvolutionaryTrace:Q9C8S6
            Genevestigator:Q9C8S6 GermOnline:AT1G63220 Uniprot:Q9C8S6
        Length = 147

 Score = 100 (40.3 bits), Expect = 0.00031, P = 0.00031
 Identities = 31/128 (24%), Positives = 55/128 (42%)

Query:     6 LDITVVSASDLKTAGMFSKMNVYAVVTIFGESQTTSVARDCGVRPTWNHQMRFNIDEAAA 65
             L++ +VSA  L+ A   + M+ Y  +T   + Q ++VA   G  P WN    F + E   
Sbjct:     6 LEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTT 65

Query:    66 MQNNLTIVYSIRSTGGCFGNSDLGEVFVPVKEMLLRSNGDDDKPMSYNITTPGGRAKGVL 125
                 L      +  G    +  +GE  +P++ + +  +     P +YN+       KG +
Sbjct:    66 ---ELKAKIFDKDVGT--EDDAVGEATIPLEPVFVEGS---IPPTAYNVVKDE-EYKGEI 116

Query:   126 NVSYKFGP 133
              V+  F P
Sbjct:   117 WVALSFKP 124


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.134   0.403    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      336       187   0.00085  110 3  11 23  0.36    33
                                                     31  0.41    35


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  7
  No. of states in DFA:  582 (62 KB)
  Total size of DFA:  155 KB (2093 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.03u 0.15s 14.18t   Elapsed:  00:00:00
  Total cpu time:  14.03u 0.15s 14.18t   Elapsed:  00:00:00
  Start:  Fri May 10 03:43:49 2013   End:  Fri May 10 03:43:49 2013

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